HHSEARCH alignment of GI: 254780969 and SCOP domain: d1ylqa1

Alignment

Probab=92.70  E-value=0.3  Score=25.32  Aligned_cols=68  Identities=12%  Similarity=0.170  Sum_probs=53.0

Q ss_pred             HHHHHHHHHCCCCCEEEEEEC-----CC-CCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
Q ss_conf             999999982199667999974-----89-99669999970466899978999999999998727972688988206788
Q gi|254780969|r    6 HEIEKMIKKGIPQSIVTIHDL-----AG-DGNHYAAEIISEEFRGKNRIQQHQMVYDSLGNKMGNALHALSIKTSVPDS   78 (79)
Q Consensus         6 ~~I~~~i~~~l~~~~v~V~d~-----sg-~~~Hf~i~VvS~~F~g~s~i~rhr~Vy~~L~~~i~~~IHAlsikt~tpee   78 (79)
                      ++|++.+.+.++++.|-+.-.     .. ++|-..+.||++.+.  +..+|.+.+...+.....   +-+.+..+||+|
T Consensus         2 ~~i~e~ik~~~~~~kViLFGS~ArG~~~~~~SDiDllVV~~~~~--~~~~r~~~~~~~~~~~~~---~pvd~~v~tpee   75 (90)
T d1ylqa1           2 KEIKEITKKDVQDAEIYLYGSVVEGDYSIGLSDIDVAIVSDVFE--DRNRKLEFFGKITKKFFD---SPFEFHILTKKE   75 (90)
T ss_dssp             HHHHHHHHHHCTTCEEEEESHHHHCCSSSCCCSEEEEEECGGGG--SHHHHHHHHHHHHHHTTT---CSEEEEEECHHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCC--CHHHHHHHHHHHHHHCCC---CCEEEEECCHHH
T ss_conf             78999999878995899987620389878888657999967888--988999999999864369---984899818999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: Catalytic subunit of bi-partite nucleotidyltransferase
domain: Putative nucleotidyltransferase AF0614
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]