HHsearch alignment for GI: 254780970 and conserved domain: COG0611

>COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism].
Probab=99.86  E-value=2e-20  Score=159.01  Aligned_cols=271  Identities=22%  Similarity=0.292  Sum_probs=187.0

Q ss_pred             CCCEEECCCCCEEEEEECCCEEEEEE----ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCC
Q ss_conf             97489933477368983698399999----51788777658888721055810225767787436877504578-75686
Q gi|254780970|r   64 GKHVIQGPGENAGVVDIGGGDCVVFK----MESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVAAMNSLRFG-AIHHP  138 (737)
Q Consensus        64 ~~~vi~~~~~~a~vi~~~~~~~~~~k----~EtHNhPs~i~P~~GAaTg~gG~iRDi~~~Ga~p~a~~~~l~~g-~~~~p  138 (737)
T Consensus        18 ~~~~~~~~GDDaA~v~~~~~~~lvvttD~lv~~~hF~~~~~p~d~G~Ka~a~NlSDlAAMGa~P~~~~lsl~lP~~~d--   95 (317)
T COG0611          18 REDVVLGIGDDAALVDAPEGQRLVVTTDMLVEGTHFPPDMTPEDLGWKALAVNLSDLAAMGARPKAFLLSLGLPPDLD--   95 (317)
T ss_pred             CCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCC--
T ss_conf             655332577764798158886489996121253556999999998789999888899974887653426552899999--


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHH
Q ss_conf             38889988874588665430872113203552156766422112211211355431122568977999657656444104
Q gi|254780970|r  139 KTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCYNNNIIVNTFAAGIAKTNAIFSSKARGIGLPLVYLGAKTGRDGIGG  218 (737)
Q Consensus       139 ~~~~~~~~~~~G~~~ygN~~G~P~v~G~~~~~~~y~~~~~v~~~~~Gi~~~~~~~~~~~~~~Gd~ii~~G~~tg~dGi~G  218 (737)
T Consensus        96 --~~~~~~~~~Gi~e~~~~y~~~lIGGDt~~-----~~l~is~t~iG~~~~~~~l~R~gAkpGD~v~vtG----~lG~sa  164 (317)
T COG0611          96 --EEWLEALADGIFEAAKKYGVKLIGGDTNR-----GPLSISVTAIGVLPKGRALLRSGAKPGDLVAVTG----TLGRSA  164 (317)
T ss_pred             --HHHHHHHHHHHHHHHHHCCCEEECCCCCC-----CCEEEEEEEEEECCCCCCEECCCCCCCCEEEECC----CCCHHH
T ss_conf             --99999999999999998298086433678-----7358999999961787410046999999999918----876648


Q ss_pred             HHHHHHHHCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHC
Q ss_conf             666677728653334---44332679899988899987401138301103477520111223320147752899620220
Q gi|254780970|r  219 ASMASEEFGENIAKK---RPTVQVGDPFTGKCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDKVP  295 (737)
Q Consensus       219 a~~sS~~~~~~~~~~---~~~VQ~gdp~~ek~~~~~~~~~~~~~~i~~~~D~gaGGl~~a~~Ema~~~~~G~~i~l~~vp  295 (737)
T Consensus       165 agl~ll~~~~~~~~~~~l~~r~~~P~Pr-----v~~g~~l~~--~a~aa~DiSDG-L~~dL~~i~~aS~vg~~I~~~~lp  236 (317)
T COG0611         165 AGLELLLNVLGPEDEEELIERHLRPTPR-----VELGLALAK--LASAAMDISDG-LAADLGHIARASGVGIVIDEDLLP  236 (317)
T ss_pred             HHHHHHHCCCCCCHHHHHHHHHCCCCCC-----HHHHHHHHH--HHHHHEECCHH-HHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9999996146753038999984499997-----567899998--87775123065-999999999982981999843378


Q ss_pred             CCCC-------CCCHHHHHHCCCCC--EEEEEEECCCHHHHHHHHHHHCCEEECCCCEEECCCCCCCCCCCC
Q ss_conf             4667-------89998986178885--089999546758899988870971311221210443100025864
Q gi|254780970|r  296 TCEE-------GMTAYEMMLSESQE--RMLMILNPEKQHKAQEILNKWGLHFSIIGITTNDKLFRVIHRGEE  358 (737)
Q Consensus       296 ~~~~-------~l~~~ei~~sEsQe--R~~~~v~~~~~~~~~~i~~~~~~~~~~iG~vt~~~~~~v~~~g~~  358 (737)
T Consensus       237 ~~~~~~~~~~~~~~~~~~aL~-gGEDyEL~ft~p~~~~~~~~~~~~~~~--~~~IG~v~~~~g~~~~~dgk~  305 (317)
T COG0611         237 LSDAVLEALDELGDPLEWALS-GGEDYELVFTVPEENREALLDALRSLG--VTIIGRVTEGEGVVVLVDGKE  305 (317)
T ss_pred             CCHHHHHHHHCCCCHHHHHHC-CCCCEEEEEEECCHHHHHHHHHHHHCC--CEEEEEEEECCCEEEEECCCE
T ss_conf             867789877544778999863-687448999837024799999987549--669999962587389841856