HHsearch alignment for GI: 254780970 and conserved domain: COG0611
>COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism].
Probab=99.86 E-value=2e-20 Score=159.01 Aligned_cols=271 Identities=22% Similarity=0.292 Sum_probs=187.0
Q ss_pred CCCEEECCCCCEEEEEECCCEEEEEE----ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCC
Q ss_conf 97489933477368983698399999----51788777658888721055810225767787436877504578-75686
Q gi|254780970|r 64 GKHVIQGPGENAGVVDIGGGDCVVFK----MESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVAAMNSLRFG-AIHHP 138 (737)
Q Consensus 64 ~~~vi~~~~~~a~vi~~~~~~~~~~k----~EtHNhPs~i~P~~GAaTg~gG~iRDi~~~Ga~p~a~~~~l~~g-~~~~p 138 (737)
T Consensus 18 ~~~~~~~~GDDaA~v~~~~~~~lvvttD~lv~~~hF~~~~~p~d~G~Ka~a~NlSDlAAMGa~P~~~~lsl~lP~~~d-- 95 (317)
T COG0611 18 REDVVLGIGDDAALVDAPEGQRLVVTTDMLVEGTHFPPDMTPEDLGWKALAVNLSDLAAMGARPKAFLLSLGLPPDLD-- 95 (317)
T ss_pred CCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCC--
T ss_conf 655332577764798158886489996121253556999999998789999888899974887653426552899999--
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHH
Q ss_conf 38889988874588665430872113203552156766422112211211355431122568977999657656444104
Q gi|254780970|r 139 KTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCYNNNIIVNTFAAGIAKTNAIFSSKARGIGLPLVYLGAKTGRDGIGG 218 (737)
Q Consensus 139 ~~~~~~~~~~~G~~~ygN~~G~P~v~G~~~~~~~y~~~~~v~~~~~Gi~~~~~~~~~~~~~~Gd~ii~~G~~tg~dGi~G 218 (737)
T Consensus 96 --~~~~~~~~~Gi~e~~~~y~~~lIGGDt~~-----~~l~is~t~iG~~~~~~~l~R~gAkpGD~v~vtG----~lG~sa 164 (317)
T COG0611 96 --EEWLEALADGIFEAAKKYGVKLIGGDTNR-----GPLSISVTAIGVLPKGRALLRSGAKPGDLVAVTG----TLGRSA 164 (317)
T ss_pred --HHHHHHHHHHHHHHHHHCCCEEECCCCCC-----CCEEEEEEEEEECCCCCCEECCCCCCCCEEEECC----CCCHHH
T ss_conf --99999999999999998298086433678-----7358999999961787410046999999999918----876648
Q ss_pred HHHHHHHHCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHC
Q ss_conf 666677728653334---44332679899988899987401138301103477520111223320147752899620220
Q gi|254780970|r 219 ASMASEEFGENIAKK---RPTVQVGDPFTGKCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDKVP 295 (737)
Q Consensus 219 a~~sS~~~~~~~~~~---~~~VQ~gdp~~ek~~~~~~~~~~~~~~i~~~~D~gaGGl~~a~~Ema~~~~~G~~i~l~~vp 295 (737)
T Consensus 165 agl~ll~~~~~~~~~~~l~~r~~~P~Pr-----v~~g~~l~~--~a~aa~DiSDG-L~~dL~~i~~aS~vg~~I~~~~lp 236 (317)
T COG0611 165 AGLELLLNVLGPEDEEELIERHLRPTPR-----VELGLALAK--LASAAMDISDG-LAADLGHIARASGVGIVIDEDLLP 236 (317)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHCCCCCC-----HHHHHHHHH--HHHHHEECCHH-HHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 9999996146753038999984499997-----567899998--87775123065-999999999982981999843378
Q ss_pred CCCC-------CCCHHHHHHCCCCC--EEEEEEECCCHHHHHHHHHHHCCEEECCCCEEECCCCCCCCCCCC
Q ss_conf 4667-------89998986178885--089999546758899988870971311221210443100025864
Q gi|254780970|r 296 TCEE-------GMTAYEMMLSESQE--RMLMILNPEKQHKAQEILNKWGLHFSIIGITTNDKLFRVIHRGEE 358 (737)
Q Consensus 296 ~~~~-------~l~~~ei~~sEsQe--R~~~~v~~~~~~~~~~i~~~~~~~~~~iG~vt~~~~~~v~~~g~~ 358 (737)
T Consensus 237 ~~~~~~~~~~~~~~~~~~aL~-gGEDyEL~ft~p~~~~~~~~~~~~~~~--~~~IG~v~~~~g~~~~~dgk~ 305 (317)
T COG0611 237 LSDAVLEALDELGDPLEWALS-GGEDYELVFTVPEENREALLDALRSLG--VTIIGRVTEGEGVVVLVDGKE 305 (317)
T ss_pred CCHHHHHHHHCCCCHHHHHHC-CCCCEEEEEEECCHHHHHHHHHHHHCC--CEEEEEEEECCCEEEEECCCE
T ss_conf 867789877544778999863-687448999837024799999987549--669999962587389841856