HHsearch alignment for GI: 254780970 and conserved domain: cd02195

>cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP.
Probab=100.00  E-value=3.3e-33  Score=246.60  Aligned_cols=246  Identities=21%  Similarity=0.250  Sum_probs=186.4

Q ss_pred             CCCC--CCCCCEEEECCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             0001--35763142037776227973045321000010011356789777641027851022322102456668621346
Q gi|254780970|r  430 IQLP--GGDAGVIRVEGHETKALAFSSDVTPRYVKADPFEGTKQAVAECWRNIIATGAKPLAITDNLNFGNPEKEEIMGQ  507 (737)
Q Consensus       430 v~~P--g~DaaVv~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~Eal~Nl~a~Ga~Plait~~lnf~~P~~~e~~~q  507 (737)
T Consensus        35 lvg~~~gdDaAvi~~~--~~~~lv~t~D~f~~~v-~dp~~~G~~Av~~alsDiaamGa~P~~~l~~l~lP~~~~~~~~~~  111 (287)
T cd02195          35 LVGLGTGDDAAVYRLP--GGLALVQTTDFFPPIV-DDPYLFGRIAAANALSDIYAMGAKPLSALAIVTLPRKLPALQEEV  111 (287)
T ss_pred             CCCCCCCCCEEEEEEC--CCEEEEEECCCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHH
T ss_conf             2389987754899718--9818999757877766-598999999999866469884587699998802777775112999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHH-
Q ss_conf             9999999985221028866544320011236866676311122223335202331021438980751377665543267-
Q gi|254780970|r  508 FVHSVKGIREACQILDFPIVSGNVSFYNETNGQSIFPTPTIAGVGILPDYSLMTRIDSAHEGDLILMIGNDGCHLDCSM-  586 (737)
Q Consensus       508 l~~av~gl~d~c~~lgipivgGkvSl~n~t~~~~I~pTpvi~~vG~v~d~~~~it~~~k~~Gd~I~liG~~~~~LggS~-  586 (737)
T Consensus       112 l~~i~~Gi~~~~~~~gv~ivGGhT~------~~~-~~~i~~tv~G~~~~-~~~i~~~~ak~GD~IivTk~----lG~g~~  179 (287)
T cd02195         112 LREILAGGKDKLREAGAVLVGGHTI------EGP-EPKYGLSVTGLVHP-NKILRNSGAKPGDVLILTKP----LGTGIL  179 (287)
T ss_pred             HHHHHHHHHHHHHHCCCCEECCCEE------CCC-CCEEEEEEEEEECC-CCCEECCCCCCCCEEEEECC----CCHHHH
T ss_conf             9999999999999829957755332------088-86688889988757-76254268999999999578----758999


Q ss_pred             HHHHHHCCCCCCCCCCCHHHHH----HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
Q ss_conf             8888611678999647989999----999999999995980699464865799999999845897089980566689878
Q gi|254780970|r  587 YSLECASSNIGPPPKVDCHLEK----NHGFFVLSMINAKKITACHDISTGGLIITLAEMTISSAKGMDIILPIEIEKDPK  662 (737)
Q Consensus       587 ~~~~~~~~~~g~~p~~d~~~~k----~~~~~v~~li~~g~I~S~HDiSdGGL~~aL~EMa~as~~G~~I~L~~~~~~d~~  662 (737)
T Consensus       180 ~~a~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~v~Am~DiT~gGL~g~L~ema~aSgvg~~i~~~~IPv----  251 (287)
T cd02195         180 FAAEMAGLA----RGEDIDAALESMARLNRAAAELLRKYGAHACTDVTGFGLLGHLLEMARASGVSAEIDLDKLPL----  251 (287)
T ss_pred             HHHHHCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCE----
T ss_conf             999872667----868899999998531399999986558733323655478999999999779909997044877----


Q ss_pred             HHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf             8872988321899996880998999998579849998998
Q gi|254780970|r  663 PFLFGEDQGRYVVCISPENQDLVMSEANNKNIPLRYLGKV  702 (737)
Q Consensus       663 ~~LFsEs~Gr~ii~V~~~~~~~~~~~~~~~gi~~~~IG~V  702 (737)
T Consensus       252 ----~qtsG~ll~~v~~~~a~~~~~~l~~~g~~a~iIG~V  287 (287)
T cd02195         252 ----LQTSGGLLAAVPPEDAAALLALLKAGGPPAAIIGEV  287 (287)
T ss_pred             ----EEECCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             ----971582599986899999999999669984999779