HHsearch alignment for GI: 254780970 and conserved domain: cd06061
>cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=100.00 E-value=2.8e-40 Score=295.05 Aligned_cols=274 Identities=24% Similarity=0.385 Sum_probs=217.7
Q ss_pred HHHHHHHHHCCCCEEECC--CCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 899975120697489933--477368983698399999517887776588887210558102257677874368775045
Q gi|254780970|r 54 KKWLRTLPTTGKHVIQGP--GENAGVVDIGGGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVAAMNSLR 131 (737)
Q Consensus 54 ~~~l~~~~~~~~~vi~~~--~~~a~vi~~~~~~~~~~k~EtHNhPs~i~P~~GAaTg~gG~iRDi~~~Ga~p~a~~~~l~ 131 (737)
T Consensus 12 ~~~~~~l~~~~~~v~vg~~~gdDaavi~~~~~~lv-v----ttDp~~~~~~~~G~~ava~~~sDI~amGa~P~~~l~~l~ 86 (298)
T cd06061 12 RLILKNLGADRDEVLVGPGGGEDAAVVDFGGKVLV-V----STDPITGAGKDAGWLAVHIAANDIATSGARPRWLLVTLL 86 (298)
T ss_pred HHHHHHCCCCCCCEEECCCCCCEEEEEEECCCEEE-E----ECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHEE
T ss_conf 99861279999888778999852599986898799-9----848830581369999999879999985998288761211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 78756863888998887458866543087211320355215676642211221121135543112256897799965765
Q gi|254780970|r 132 FGAIHHPKTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCYNNNIIVNTFAAGIAKTNAIFSSKARGIGLPLVYLGAKT 211 (737)
Q Consensus 132 ~g~~~~p~~~~~~~~~~~G~~~ygN~~G~P~v~G~~~~~~~y~~~~~v~~~~~Gi~~~~~~~~~~~~~~Gd~ii~~G~~t 211 (737)
T Consensus 87 ~p~~~~---~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~~~~~~-~~i~~t~~G~~~~~~~~~~~~ak~GD~Iiltg--- 159 (298)
T cd06061 87 LPPGTD---EEELKAIMREINEAAKELGVSIVGGHTEVTPGVTR-PIISVTAIGKGEKDKLVTPSGAKPGDDIVMTK--- 159 (298)
T ss_pred CCCCCC---HHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCC-CEEEEEEEEEECCCCEECCCCCCCCCEEEEEC---
T ss_conf 889999---99999999999999998399564431586478777-67999999995688663067799999999989---
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCC--CCCCCH-HHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 6444104666677728653334443--326798-9998889998740113830110347752011122332014775289
Q gi|254780970|r 212 GRDGIGGASMASEEFGENIAKKRPT--VQVGDP-FTGKCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGIT 288 (737)
Q Consensus 212 g~dGi~Ga~~sS~~~~~~~~~~~~~--VQ~gdp-~~ek~~~~~~~~~~~~~~i~~~~D~gaGGl~~a~~Ema~~~~~G~~ 288 (737)
T Consensus 160 -~~G~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~a~~Dis~gGL~~~L~e~~~~s~vg~~ 237 (298)
T cd06061 160 -GAGIEGTAILANDFEEELKKRLSEEELREAAKLFYKISVVKEAL-IAAEAGVTAMHDATEGGILGALWEVAEASGVGLR 237 (298)
T ss_pred -CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH-HHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
T ss_conf -84076899999870665523467588998787540222399999-7510575598716755277789999974697499
Q ss_pred EEEHHHCCCCC--------CCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCEEECCCCE
Q ss_conf 96202204667--------899989861788850899995467588999888709713112212
Q gi|254780970|r 289 LDLDKVPTCEE--------GMTAYEMMLSESQERMLMILNPEKQHKAQEILNKWGLHFSIIGIT 344 (737)
Q Consensus 289 i~l~~vp~~~~--------~l~~~ei~~sEsQeR~~~~v~~~~~~~~~~i~~~~~~~~~~iG~v 344 (737)
T Consensus 238 I~~~~iPi~~~~~~~~~~~~~dp~~~~~---~G~ll~~v~~~~~~~v~~~l~~~g~~a~vIGeV 298 (298)
T cd06061 238 IEKDKIPIRQETKEICEALGIDPLRLIS---SGTLLITVPPEKGDELVDALEEAGIPASVIGKI 298 (298)
T ss_pred EEECCCCCCHHHHHHHHHCCCCHHHHHH---CCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 9775468887999999974978888970---887999998899999999999649796999869