HHsearch alignment for GI: 254780970 and conserved domain: cd06061

>cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=100.00  E-value=2.8e-40  Score=295.05  Aligned_cols=274  Identities=24%  Similarity=0.385  Sum_probs=217.7

Q ss_pred             HHHHHHHHHCCCCEEECC--CCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf             899975120697489933--477368983698399999517887776588887210558102257677874368775045
Q gi|254780970|r   54 KKWLRTLPTTGKHVIQGP--GENAGVVDIGGGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVAAMNSLR  131 (737)
Q Consensus        54 ~~~l~~~~~~~~~vi~~~--~~~a~vi~~~~~~~~~~k~EtHNhPs~i~P~~GAaTg~gG~iRDi~~~Ga~p~a~~~~l~  131 (737)
T Consensus        12 ~~~~~~l~~~~~~v~vg~~~gdDaavi~~~~~~lv-v----ttDp~~~~~~~~G~~ava~~~sDI~amGa~P~~~l~~l~   86 (298)
T cd06061          12 RLILKNLGADRDEVLVGPGGGEDAAVVDFGGKVLV-V----STDPITGAGKDAGWLAVHIAANDIATSGARPRWLLVTLL   86 (298)
T ss_pred             HHHHHHCCCCCCCEEECCCCCCEEEEEEECCCEEE-E----ECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHEE
T ss_conf             99861279999888778999852599986898799-9----848830581369999999879999985998288761211


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             78756863888998887458866543087211320355215676642211221121135543112256897799965765
Q gi|254780970|r  132 FGAIHHPKTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCYNNNIIVNTFAAGIAKTNAIFSSKARGIGLPLVYLGAKT  211 (737)
Q Consensus       132 ~g~~~~p~~~~~~~~~~~G~~~ygN~~G~P~v~G~~~~~~~y~~~~~v~~~~~Gi~~~~~~~~~~~~~~Gd~ii~~G~~t  211 (737)
T Consensus        87 ~p~~~~---~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~~~~~~-~~i~~t~~G~~~~~~~~~~~~ak~GD~Iiltg---  159 (298)
T cd06061          87 LPPGTD---EEELKAIMREINEAAKELGVSIVGGHTEVTPGVTR-PIISVTAIGKGEKDKLVTPSGAKPGDDIVMTK---  159 (298)
T ss_pred             CCCCCC---HHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCC-CEEEEEEEEEECCCCEECCCCCCCCCEEEEEC---
T ss_conf             889999---99999999999999998399564431586478777-67999999995688663067799999999989---


Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCC--CCCCCH-HHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCEE
Q ss_conf             6444104666677728653334443--326798-9998889998740113830110347752011122332014775289
Q gi|254780970|r  212 GRDGIGGASMASEEFGENIAKKRPT--VQVGDP-FTGKCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGIT  288 (737)
Q Consensus       212 g~dGi~Ga~~sS~~~~~~~~~~~~~--VQ~gdp-~~ek~~~~~~~~~~~~~~i~~~~D~gaGGl~~a~~Ema~~~~~G~~  288 (737)
T Consensus       160 -~~G~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~a~~Dis~gGL~~~L~e~~~~s~vg~~  237 (298)
T cd06061         160 -GAGIEGTAILANDFEEELKKRLSEEELREAAKLFYKISVVKEAL-IAAEAGVTAMHDATEGGILGALWEVAEASGVGLR  237 (298)
T ss_pred             -CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH-HHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
T ss_conf             -84076899999870665523467588998787540222399999-7510575598716755277789999974697499


Q ss_pred             EEEHHHCCCCC--------CCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCEEECCCCE
Q ss_conf             96202204667--------899989861788850899995467588999888709713112212
Q gi|254780970|r  289 LDLDKVPTCEE--------GMTAYEMMLSESQERMLMILNPEKQHKAQEILNKWGLHFSIIGIT  344 (737)
Q Consensus       289 i~l~~vp~~~~--------~l~~~ei~~sEsQeR~~~~v~~~~~~~~~~i~~~~~~~~~~iG~v  344 (737)
T Consensus       238 I~~~~iPi~~~~~~~~~~~~~dp~~~~~---~G~ll~~v~~~~~~~v~~~l~~~g~~a~vIGeV  298 (298)
T cd06061         238 IEKDKIPIRQETKEICEALGIDPLRLIS---SGTLLITVPPEKGDELVDALEEAGIPASVIGKI  298 (298)
T ss_pred             EEECCCCCCHHHHHHHHHCCCCHHHHHH---CCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             9775468887999999974978888970---887999998899999999999649796999869