RPSBLAST alignment of GI: 254780970 and protein with PDBid: 3mcq
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} Length = 319
Score = 85.3 bits (210), Expect = 5e-17
Identities = 55/315 (17%), Positives = 105/315 (33%), Gaps = 32/315 (10%)
Query: 419 EQYDTMIQSNSIQLPGGDAGVIRVEGHETKALAFSSDV----TPRYVKADPFEGTKQAVA 474
++Y +++ G DA +I+ LA S+D+ T Y DP+ +++A
Sbjct: 10 QRYFRRAHPSAVLGVGDDAALIQPS--PGMELAVSADMLVANTHFYPNIDPWLIGWKSLA 67
Query: 475 ECWRNIIATGAKPLAITDNLNFGNPEKEEIMGQFVHSVKGIREACQILDFPIVSGNVSFY 534
++ A GA+P T + +++ I G D ++ G+ +
Sbjct: 68 VNISDMAAMGAQPRWATLTIALPEADEDWIS----KFAAGFFACAAQFDIALIGGDTTRG 123
Query: 535 NETNGQSIFPTPTIAGVGILPDYSLMTRIDSAHEGDLILMIGNDGCHLDCSMYSLECASS 594
T I +G P + + R +A D I + G G
Sbjct: 124 PLTISVQI--------MGETPPGASLLR-STARADDDIWVSGPLGDAALALAAIQGRYPL 174
Query: 595 NIGPPPKVDCHLEKNHGFFVLSMINAKKITACHDISTGGLIITLAEMTISSAKGMDIILP 654
+ L + VL + DIS GL+ L + S G ++ L
Sbjct: 175 SDTELAACGKALHQPQPRVVLGQALRGLAHSALDIS-DGLLADLGHILEHSQVGAEVWLK 233
Query: 655 -----------IEIEKDPKPFLFGEDQGRYVVCISPENQDLVMSEANNKNIPLRYLGKV- 702
+ K L G D S +++ + ++ + +G++
Sbjct: 234 AIPKSEVVSAHSQEVAIQKMILSGGDDYELCFTASTQHRQQIADIGRQLSLDMAVIGRIT 293
Query: 703 SGSTLSIHNILNIPV 717
L IH + + P+
Sbjct: 294 DTQQLVIHGLDDAPL 308