HHsearch alignment for GI: 254780971 and conserved domain: CHL00188
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional.
Probab=99.73 E-value=2.5e-17 Score=131.66 Aligned_cols=188 Identities=24% Similarity=0.322 Sum_probs=115.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
T Consensus 2 ~~I~Iid~g~GN-i~Sv~~al~~-~g~~~~ii-~~~~~i~~~d~lILPGVGsf~~~m---~~L~~~~l~~~i~~~~~~g~ 75 (210)
T CHL00188 2 MKIGIIDYSMGN-LHSVSRAIQQ-AGQQPCII-NSESELAQVHALVLPGVGSFDLAM---KKLEKKGLITPIKKWIAEGN 75 (210)
T ss_pred CEEEEEECCCHH-HHHHHHHHHH-CCCCEEEE-CCHHHHHHCCEEEECCCCCHHHHH---HHHHHCCCHHHHHHHHHCCC
T ss_conf 779999588478-9999999998-69987997-999999648968988867389999---98863051699999997699
Q ss_pred EEEEECCCHHHHEE---------CCCHHHHHCCCCCCCE----EEEEEEEEECCCHH-----HHHHHCCCCCEEEEEEEC
Q ss_conf 17860640310100---------0001011012443324----54225767525235-----776413799689986201
Q gi|254780971|r 81 KVMGICNGFQILVE---------LNLLPGILMRNCSLKF----VCKQVLLEVVNSNT-----AFTKSYKMNQIIKCPVAH 142 (219)
Q Consensus 81 ~vLGICNGfQiL~e---------lGLlPg~l~~N~s~rf----~~r~~~~~v~~~~s-----~~~~~~~~~~~l~~piaH 142 (219)
T Consensus 76 piLGICLGmQlLf~~seEg~~~GLgli~G~v~k~~~~~~~kvPh~GWn~i~~~~~~~~~~~~~~~~~~~~~~--~~YFvH 153 (210)
T CHL00188 76 PFIGICLGLHLLFETSEEGKEEGLGIYKGQVKRLKHSPVKVIPHMGWNRLECQNSECQNSEWVNWKAWPLNP--WAYFVH 153 (210)
T ss_pred CEEEEEHHEEEEEHHCCCCCCCCCCEECCEEEECCCCCCCCCCCCCHHHEECCCCCCCCCCCCHHHCCCCCC--CEEEEE
T ss_conf 869984210221022115676773456668999378866467320542324457643344451121577677--079974
Q ss_pred CCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 3302330867741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 143 HDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 143 gEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
T Consensus 154 S---Y~~------~~~~~~~~~~~~~y-----g~~~~~a~v--~k~Ni~G~QFHPEKS~~~------Gl~lL~nFl 207 (210)
T CHL00188 154 S---YGV------MPKSQACATTTTFY-----GKQQMVAAI--EYDNIFAMQFHPEKSGEF------GLWLLREFM 207 (210)
T ss_pred E---EEE------CCCCCCEEEEEEEE-----CCEEEEEEE--EECCEEEEECCCCCCCHH------HHHHHHHHH
T ss_conf 1---355------27984379999963-----998999999--719999994880007687------999999997