HHsearch alignment for GI: 254780971 and conserved domain: KOG1224

Probab=98.30  E-value=8.5e-06  Score=57.91  Aligned_cols=171  Identities=20%  Similarity=0.333  Sum_probs=87.5

Q ss_pred             HHHHHHHHHCCCCEEEEECCCC----------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             9999999854996399821546----------445647899728734543114067752002121223322059717860
Q gi|254780971|r   16 DMIKAITKIIGQSPILVWQSDT----------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGI   85 (219)
Q Consensus        16 e~~~A~~~~~~~~~~~v~~~~~----------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGI   85 (219)
T Consensus        29 Niy~ll~~~~~vp~V~~vh~~~~~~d~~~~l~q~~~FDaIVVgPG------PG~P~~a~d~gI~~rl~~~-~~~iPilGI  101 (767)
T KOG1224          29 NIYQLLSTINGVPPVVIVHDEWTWEDAYHYLYQDVAFDAIVVGPG------PGSPMCAADIGICLRLLLE-CRDIPILGI  101 (767)
T ss_pred             HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCC------CCCCCCHHHHHHHHHHHHH-CCCCCEEEE
T ss_conf             399999874179967998343237789998864002244896689------9798747887899999986-578864654


Q ss_pred             CCCHHHHEECCCHHHHH--CCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEE---EECHHHHHHHHHC
Q ss_conf             64031010000010110--124433245422576752523577641379968998620133023---3086774115422
Q gi|254780971|r   86 CNGFQILVELNLLPGIL--MRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNY---FIDAKGLAEIEKN  160 (219)
Q Consensus        86 CNGfQiL~elGLlPg~l--~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf---~~~~~~l~~l~~~  160 (219)
T Consensus       102 CLGfQal---~l~hGA~v~~~n~p~H--Grvs~--i~~~~~~~f~gi~sg~----~~~fK~~RYHSL~in~~pid~l---  167 (767)
T KOG1224         102 CLGFQAL---GLVHGAHVVHANEPVH--GRVSG--IEHDGNILFSGIPSGR----NSDFKVVRYHSLIINSLPIDLL---  167 (767)
T ss_pred             EHHHHHH---HHHCCCCEECCCCCCC--CEEEE--EEECCCEEECCCCCCC----CCCCEEEEEEEEEECCCCHHHH---
T ss_conf             3214767---6531661103787643--24666--7726847871577788----6644047767787257761121---


Q ss_pred             CEEE-EECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCC
Q ss_conf             5036-5316888889881126688869998999848843432210067762899986429
Q gi|254780971|r  161 NQIV-FRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLLT  219 (219)
Q Consensus       161 ~~i~-~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~s  219 (219)
T Consensus       168 -~il~t~~dd----ng~i--lMsi~~~~fPhfG~qyHPES~~-----s~~g~~lfkNFl~  215 (767)
T KOG1224         168 -PILWTIYDD----NGHI--LMSIMHSSFPHFGLQYHPESIA-----STYGSQLFKNFLD  215 (767)
T ss_pred             -CCEEEEECC----CCEE--EEEEECCCCCCCCEEECHHHHH-----HHHHHHHHHHHHH
T ss_conf             -201376068----8628--9875315788534233707753-----1345799987777