HHsearch alignment for GI: 254780971 and conserved domain: KOG1559

Probab=96.78  E-value=0.0064  Score=39.53  Aligned_cols=189  Identities=20%  Similarity=0.315  Sum_probs=88.0

Q ss_pred             EEEEECCCCCCHHHH---------HHH---HHHHCCCCEEEEECCCC------CCCCCCEEEECCCCCC-CCCCCHHHHH
Q ss_conf             899844970647999---------999---99854996399821546------4456478997287345-4311406775
Q gi|254780971|r    3 TAIVQIPGLNRDNDM---------IKA---ITKIIGQSPILVWQSDT------DIPDVDLIVIPGGFSY-GDYLRCGAIA   63 (219)
Q Consensus         3 vaVl~~pGsNcd~e~---------~~A---~~~~~~~~~~~v~~~~~------~l~~~d~lvipGGFSy-gD~l~aG~i~   63 (219)
T Consensus        55 IGIL~hpg~g~~~rl~n~t~~~yIAASYVK~aEsgGARViPli~nepEe~lfqklelvNGviftGGwak~~dY~---~vv  131 (340)
T KOG1559          55 IGILSHPGDGASGRLKNATGRSYIAASYVKLAESGGARVIPLIYNEPEEILFQKLELVNGVIFTGGWAKRGDYF---EVV  131 (340)
T ss_pred             EEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCEEEECCCCCCCCCHH---HHH
T ss_conf             68860578882320136667301288899998718955887754880899999998736057417432224099---999


Q ss_pred             HHHHHHHHHHHHHH--CCCEEEEECCCHHHHEECCCH-HHHHCCCCCCCEEEEEEEEEECCCH--------HHHHHHCCC
Q ss_conf             20021212233220--597178606403101000001-0110124433245422576752523--------577641379
Q gi|254780971|r   64 ARTPVMQAIKKKAQ--QGIKVMGICNGFQILVELNLL-PGILMRNCSLKFVCKQVLLEVVNSN--------TAFTKSYKM  132 (219)
Q Consensus        64 ~~~~~~~~i~~~~~--~g~~vLGICNGfQiL~elGLl-Pg~l~~N~s~rf~~r~~~~~v~~~~--------s~~~~~~~~  132 (219)
T Consensus       132 --kkifnk~le~nDaGehFPvyg~CLGFE~lsmiISqnrdile~~d~vd~AssLqF~~nvn~~~t~FQrFPpELLkkL~~  209 (340)
T KOG1559         132 --KKIFNKVLERNDAGEHFPVYGICLGFELLSMIISQNRDILERFDAVDVASSLQFVGNVNIHGTMFQRFPPELLKKLST  209 (340)
T ss_pred             --HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHCCHHHHHHHCC
T ss_conf             --999988876067866362124345389999998557068775032021353023035540011575489999987352


Q ss_pred             CCEEEEEEECCCE----EEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCC
Q ss_conf             9689986201330----2330867741154225036531688888988112668886999899984884343221006
Q gi|254780971|r  133 NQIIKCPVAHHDG----NYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHG  206 (219)
Q Consensus       133 ~~~l~~piaHgEG----rf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~  206 (219)
T Consensus       210 -dcLvmq-~Hk~gisp~nF~~N~-~Ls~---FFnilTT~~D~~----~k~fvSTv~~~kYPvtgfQWHPEKnafEWgs  277 (340)
T KOG1559         210 -DCLVMQ-NHKFGISPKNFQGNP-ALSS---FFNILTTCTDGN----SKTFVSTVESKKYPVTGFQWHPEKNAFEWGS  277 (340)
T ss_pred             -CHHEEE-CCCCCCCHHHCCCCH-HHHH---HHHHEEEECCCC----CEEEEEEECCEECCCEEEEECCCCCCCCCCC
T ss_conf             -311000-332344623045798-8997---876533301798----5079885203012410045667557432355