HHsearch results for GI: 254780971 and protein with PDBid: 2ywb_A
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway; 2.10A {Thermus thermophilus HB8} PDB: 2ywc_A*
Probab=99.41 E-value=2e-12 Score=98.86 Aligned_cols=176 Identities=14% Similarity=0.234 Sum_probs=109.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC-C---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 899844970647999999998549963998215-4---644564789972873454311406775200212122332205
Q gi|254780971|r 3 TAIVQIPGLNRDNDMIKAITKIIGQSPILVWQS-D---TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQ 78 (219)
Q Consensus 3 vaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~-~---~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~ 78 (219)
|+||.|-..+. .-.++.+..+ +....++-++ + ..-.+.+++||-||= +.+..++ ......+..+.
T Consensus 2 IlIlDfGsQyt-qlIaRriREl-gvyseI~P~~~~~eei~~~~p~GIILSGGP--~SV~d~~-------~~~~~~~i~~~ 70 (503)
T 2ywb_A 2 VLVLDFGSQYT-RLIARRLREL-RAFSLILPGDAPLEEVLKHRPQALILSGGP--RSVFDPD-------APRPDPRLFSS 70 (503)
T ss_dssp EEEEESSCTTH-HHHHHHHHTT-TCCEEEEETTCCHHHHHTTCCSEEEECCCS--SCSSCTT-------CCCCCGGGGCS
T ss_pred EEEEECCCHHH-HHHHHHHHHC-CCEEEEECCCCCHHHHHHCCCCEEEECCCC--CCCCCCC-------CCHHHHHHHCC
T ss_conf 89998897299-9999999986-983999869899999971698999989999--8734589-------85031998839
Q ss_pred CCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHH
Q ss_conf 97178606403101000001011012443324542257675252357764137996899862013302330867741154
Q gi|254780971|r 79 GIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIE 158 (219)
Q Consensus 79 g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~ 158 (219)
+.|+||||-|+|+|++. +.|...+.....|- +..+ ...+++.++++. ....+|.+|+.-- .++.
T Consensus 71 ~IPILGICyG~QlLa~~--~GG~V~k~~~~e~G--~~~i--~~~~~~LF~gl~--~~~~VwmsHsD~V--------~~lP 134 (503)
T 2ywb_A 71 GLPLLGICYGMQLLAQE--LGGRVERAGRAEYG--KALL--TRHEGPLFRGLE--GEVQVWMSHQDAV--------TAPP 134 (503)
T ss_dssp SCCEEEETHHHHHHHHT--TTCEEECC---CEE--EEEC--SEECSGGGTTCC--SCCEEEEECSCEE--------EECC
T ss_pred CCCEEEECHHHHHHHHH--CCCEEEECCCCCCC--CCEE--CCCCCCCCCCCC--CCEEEEEEECCCC--------CCCC
T ss_conf 99699981899999998--09989958987667--6100--242565336788--8759999815313--------4699
Q ss_pred HCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 159 KNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 159 ~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+ +...+-..+ .+.||||.+.+.+++|.+.|||.+. +..|+.+++|++
T Consensus 135 ~-gf~viA~s~-------~~~iaai~~~~~~iyGVQFHPEv~h-----T~~G~~iL~NFl 181 (503)
T 2ywb_A 135 P-GWRVVAETE-------ENPVAAIASPDGRAYGVQFHPEVAH-----TPKGMQILENFL 181 (503)
T ss_dssp T-TCEEEEECS-------SCSCSEEECTTSSEEEESBCTTSTT-----STTHHHHHHHHH
T ss_pred C-CCEEEEECC-------CCCCHHHEECCCCCEEEEECCCCCC-----CCCCHHHHHHHH
T ss_conf 9-717874047-------7620111000456516873331046-----868889999999