HHsearch results for GI: 254780971 and protein with PDBid: 2ywj_A
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii DSM2661}
Probab=99.76 E-value=1.3e-17 Score=132.05 Aligned_cols=178 Identities=19% Similarity=0.250 Sum_probs=101.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
|.++||.++|. -+|..+|+++ .+.++.++. ++.+|+++|+||+|||= +.+..........+.+..++++
T Consensus 1 m~igil~~~G~--~~~~~~al~~-~g~~~~~v~-~~~~l~~~d~lIlpGG~-------~~~~~~~~~~~~~~~~~~~~~~ 69 (186)
T 2ywj_A 1 MIIGVLAIQGD--VEEHEEAIKK-AGYEAKKVK-RVEDLEGIDALIIPGGE-------STAIGKLMKKYGLLEKIKNSNL 69 (186)
T ss_dssp CEEEEECSSSC--CHHHHHHHHH-TTSEEEEEC-SGGGGTTCSEEEECCSC-------HHHHHHHHHHTTHHHHHHTCCC
T ss_pred CEEEEEECCCC--HHHHHHHHHH-CCCCEEEEC-CHHHHHCCCEEEECCCC-------HHHHHHHCCCCCHHHHHHHCCC
T ss_conf 98999916775--9999999998-899399989-98997179989999987-------1788876441663899997799
Q ss_pred EEEEECCCHHHHEEC-CCHHHHHCCCCCCCEEEEEEEEEEC-CCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHH
Q ss_conf 178606403101000-0010110124433245422576752-52357764137996899862013302330867741154
Q gi|254780971|r 81 KVMGICNGFQILVEL-NLLPGILMRNCSLKFVCKQVLLEVV-NSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIE 158 (219)
Q Consensus 81 ~vLGICNGfQiL~el-GLlPg~l~~N~s~rf~~r~~~~~v~-~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~ 158 (219)
|+||||.|+|+|.+. |.-...+ ................. .....++... .+....+.-|.+-....++.
T Consensus 70 PiLGIClG~Qll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~~~~~~~~------ 140 (186)
T 2ywj_A 70 PILGTCAGMVLLSKGTGINQILL-ELMDITVKRNAYGRQVDSFEKEIEFKDL--GKVYGVFIRAPVVDKILSDD------ 140 (186)
T ss_dssp CEEEETHHHHHHSSCCSSCCCCC-CCSSEEEETTTTCSSSCCEEEEEEETTT--EEEEEEESSCCEEEEECCTT------
T ss_pred CEEEECHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCEEEEEEEEECCCCCCC------
T ss_conf 88998674678875325454322-2245552111121221122323211578--88756999876640235421------
Q ss_pred HCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 159 KNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 159 ~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
-.++..+ .+.|+++. .+|++|+++|||++ .||.++|++++
T Consensus 141 --~~~~~~~---------~~~i~ai~--~~~~~G~QFHPE~s-------~~g~~i~~~Fl 180 (186)
T 2ywj_A 141 --VEVIARD---------GDKIVGVK--QGKYMALSFHPELS-------EDGYKVYKYFV 180 (186)
T ss_dssp --CEEEEEE---------TTEEEEEE--ETTEEEESSCGGGS-------TTHHHHHHHHH
T ss_pred --EEEEECC---------CCEEEEEE--ECCEEEEECCCEEC-------CCHHHHHHHHH
T ss_conf --1344314---------87469998--29999998187546-------71789999999