HHsearch results for GI: 254780971 and protein with PDBid: 2ywj_A

>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii DSM2661}
Probab=99.76  E-value=1.3e-17  Score=132.05  Aligned_cols=178  Identities=19%  Similarity=0.250  Sum_probs=101.0

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r    1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI   80 (219)
Q Consensus         1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~   80 (219)
                      |.++||.++|.  -+|..+|+++ .+.++.++. ++.+|+++|+||+|||=       +.+..........+.+..++++
T Consensus         1 m~igil~~~G~--~~~~~~al~~-~g~~~~~v~-~~~~l~~~d~lIlpGG~-------~~~~~~~~~~~~~~~~~~~~~~   69 (186)
T 2ywj_A            1 MIIGVLAIQGD--VEEHEEAIKK-AGYEAKKVK-RVEDLEGIDALIIPGGE-------STAIGKLMKKYGLLEKIKNSNL   69 (186)
T ss_dssp             CEEEEECSSSC--CHHHHHHHHH-TTSEEEEEC-SGGGGTTCSEEEECCSC-------HHHHHHHHHHTTHHHHHHTCCC
T ss_pred             CEEEEEECCCC--HHHHHHHHHH-CCCCEEEEC-CHHHHHCCCEEEECCCC-------HHHHHHHCCCCCHHHHHHHCCC
T ss_conf             98999916775--9999999998-899399989-98997179989999987-------1788876441663899997799


Q ss_pred             EEEEECCCHHHHEEC-CCHHHHHCCCCCCCEEEEEEEEEEC-CCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHH
Q ss_conf             178606403101000-0010110124433245422576752-52357764137996899862013302330867741154
Q gi|254780971|r   81 KVMGICNGFQILVEL-NLLPGILMRNCSLKFVCKQVLLEVV-NSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIE  158 (219)
Q Consensus        81 ~vLGICNGfQiL~el-GLlPg~l~~N~s~rf~~r~~~~~v~-~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~  158 (219)
                      |+||||.|+|+|.+. |.-...+ ................. .....++...  .+....+.-|.+-....++.      
T Consensus        70 PiLGIClG~Qll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~~~~~~~~------  140 (186)
T 2ywj_A           70 PILGTCAGMVLLSKGTGINQILL-ELMDITVKRNAYGRQVDSFEKEIEFKDL--GKVYGVFIRAPVVDKILSDD------  140 (186)
T ss_dssp             CEEEETHHHHHHSSCCSSCCCCC-CCSSEEEETTTTCSSSCCEEEEEEETTT--EEEEEEESSCCEEEEECCTT------
T ss_pred             CEEEECHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCEEEEEEEEECCCCCCC------
T ss_conf             88998674678875325454322-2245552111121221122323211578--88756999876640235421------


Q ss_pred             HCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf             225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r  159 KNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL  218 (219)
Q Consensus       159 ~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~  218 (219)
                        -.++..+         .+.|+++.  .+|++|+++|||++       .||.++|++++
T Consensus       141 --~~~~~~~---------~~~i~ai~--~~~~~G~QFHPE~s-------~~g~~i~~~Fl  180 (186)
T 2ywj_A          141 --VEVIARD---------GDKIVGVK--QGKYMALSFHPELS-------EDGYKVYKYFV  180 (186)
T ss_dssp             --CEEEEEE---------TTEEEEEE--ETTEEEESSCGGGS-------TTHHHHHHHHH
T ss_pred             --EEEEECC---------CCEEEEEE--ECCEEEEECCCEEC-------CCHHHHHHHHH
T ss_conf             --1344314---------87469998--29999998187546-------71789999999