HHsearch alignment for GI: 254780974 and conserved domain: cd03302

>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase_2: Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00  E-value=0  Score=811.46  Aligned_cols=417  Identities=25%  Similarity=0.382  Sum_probs=396.1

Q ss_pred             CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             988749878887279588999999999999999777689-9989999999830012789899998874637854799999
Q gi|254780974|r    1 MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGV-IPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTH   79 (435)
Q Consensus         1 m~~ry~~~e~~~ifs~~~~~~~~l~ve~A~a~a~~e~G~-ip~~aa~~I~~~~~~~~~d~~~~~~~~~~~~~~v~a~~~~   79 (435)
T Consensus         1 mi~RY~~~em~~ifS~e~~~~~~l~vE~ala~aqaelGi~i~~~a~~~i~a~~--~~~d~~~i~~~e~~t~Hdv~a~v~~   78 (436)
T cd03302           1 LASRYASKEMVYIFSPRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANV--ENIDFEIAAAEEKKLRHDVMAHVHA   78 (436)
T ss_pred             CCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCCCHHHHHHHHHHHCCCCHHHHHH
T ss_conf             98663869999881946999999999999999999829999999999999705--4489999999997719894899999


Q ss_pred             HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99867934322556777077877899999851102467888888999987333201002101232102554222333445
Q gi|254780974|r   80 LAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAM  159 (435)
Q Consensus        80 l~~~~g~~~~~iH~G~Ts~Di~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~a~~~~~~~m~grTh~Q~A~P~T~G~~~~~  159 (435)
T Consensus        79 l~~~~~~~~~~vH~G~TSqDI~DTa~~L~lk~al~~i~~~l~~l~~~L~~lA~~~~~t~m~gRTHgQ~A~PtTfG~k~a~  158 (436)
T cd03302          79 FGLLCPAAAGIIHLGATSCFVTDNTDLIQIRDALDLILPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTVGKRACL  158 (436)
T ss_pred             HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHH
T ss_conf             99857614471663754024577999999999999999999999999999999966873222006774400289999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------C---HHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHHH
Q ss_conf             5431000148899986431010011122222466-------4---6678865542257876-635202333334567788
Q gi|254780974|r  160 AYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNI-------H---PYVEQHVADAMGLKTD-PISSQVIARDRHAMYFSV  228 (435)
Q Consensus       160 ~~~~l~r~~~rl~~~~~~~~~~~lgGAvGt~~~~-------~---~~~~~~~a~~LGl~~~-~~~~~~~~rd~~~e~~~~  228 (435)
T Consensus       159 w~~el~r~~~rL~~~~~~~~~~~~~GAvGt~a~~~~~~~~~~~~~~~l~~~~a~~lgl~~~~~~~~q~~~Rd~~ae~~~~  238 (436)
T cd03302         159 WIQDLLMDLRNLERLRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKVYPVTGQTYSRKVDIDVLNA  238 (436)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             99999999999999996122213678733012045424674688999999999734887678885676873789999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHCCCCC
Q ss_conf             87764468899999999516787600025644654201232102415678775211233431002354311-43135432
Q gi|254780974|r  229 LGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVA-LWHERDIS  307 (435)
Q Consensus       229 l~~~~~~l~kia~Dl~~l~~~eigei~ep~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~-~~~erd~~  307 (435)
T Consensus       239 La~ia~~l~kia~di~~l~~--~~Ev~E~f~~gq~GSStMPHKrNPi~~E~i~~lar~~~~~~~~~~~~~~~~whERd~~  316 (436)
T cd03302         239 LSSLGATAHKIATDIRLLAN--LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAAQTASTQWFERTLD  316 (436)
T ss_pred             HHHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99999999988999998815--9817530489998758777451759899999999999985689998755543346786


Q ss_pred             CCHHHHHCCCCHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             10155541720457899999998742310043735799998644583789999999987299989999999999999998
Q gi|254780974|r  308 HSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWK  387 (435)
Q Consensus       308 ~~~~~~~~l~~~~~~~~~~l~~~~~ll~~L~vn~erm~~nl~~s~g~i~se~i~~~L~~~Gig~~~Ah~~v~~~a~~a~~  387 (435)
T Consensus       317 ~s~~er~~lpe~~~l~~~~l~~~~~~l~~L~V~~~~M~~Nl~~~~gli~se~vm~~L~~~g~gR~~Ah~~V~~~a~~a~~  396 (436)
T cd03302         317 DSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMAAVKAGGDRQDAHERIRVLSHQAAA  396 (436)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             20899889889999999999999999807989899999999760688999999999987699999999999999999999


Q ss_pred             CC------CCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHHCC
Q ss_conf             19------9989998507432305998999985188988501
Q gi|254780974|r  388 NG------AIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKH  423 (435)
Q Consensus       388 ~~------~~l~e~l~~d~~i~~~l~~~eL~~~ldP~~~~g~  423 (435)
T Consensus       397 ~~~~~~~~~~l~e~~~~d~~~~--l~~~el~~lldP~~ylG~  436 (436)
T cd03302         397 VVKQEGGDNDLIERIKNDAYFK--PIWDELDALLDPKTFIGR  436 (436)
T ss_pred             HHHHCCCCCHHHHHHHCCCCCC--CCHHHHHHHHCHHHCCCC
T ss_conf             9885467612999975498779--999999986498843699