HHsearch alignment for GI: 254780974 and conserved domain: cd03302
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase_2: Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=0 Score=811.46 Aligned_cols=417 Identities=25% Similarity=0.382 Sum_probs=396.1
Q ss_pred CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 988749878887279588999999999999999777689-9989999999830012789899998874637854799999
Q gi|254780974|r 1 MIPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGV-IPEKSSKNIWEKGRNAVFNVDRIMELDSIIKHDVIAFLTH 79 (435)
Q Consensus 1 m~~ry~~~e~~~ifs~~~~~~~~l~ve~A~a~a~~e~G~-ip~~aa~~I~~~~~~~~~d~~~~~~~~~~~~~~v~a~~~~ 79 (435)
T Consensus 1 mi~RY~~~em~~ifS~e~~~~~~l~vE~ala~aqaelGi~i~~~a~~~i~a~~--~~~d~~~i~~~e~~t~Hdv~a~v~~ 78 (436)
T cd03302 1 LASRYASKEMVYIFSPRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANV--ENIDFEIAAAEEKKLRHDVMAHVHA 78 (436)
T ss_pred CCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCCCHHHHHHHHHHHCCCCHHHHHH
T ss_conf 98663869999881946999999999999999999829999999999999705--4489999999997719894899999
Q ss_pred HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99867934322556777077877899999851102467888888999987333201002101232102554222333445
Q gi|254780974|r 80 LAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAM 159 (435)
Q Consensus 80 l~~~~g~~~~~iH~G~Ts~Di~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~a~~~~~~~m~grTh~Q~A~P~T~G~~~~~ 159 (435)
T Consensus 79 l~~~~~~~~~~vH~G~TSqDI~DTa~~L~lk~al~~i~~~l~~l~~~L~~lA~~~~~t~m~gRTHgQ~A~PtTfG~k~a~ 158 (436)
T cd03302 79 FGLLCPAAAGIIHLGATSCFVTDNTDLIQIRDALDLILPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTVGKRACL 158 (436)
T ss_pred HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHH
T ss_conf 99857614471663754024577999999999999999999999999999999966873222006774400289999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------C---HHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHHH
Q ss_conf 5431000148899986431010011122222466-------4---6678865542257876-635202333334567788
Q gi|254780974|r 160 AYAEFSRSRKRLLTAREEIAVCAISGSVGTFSNI-------H---PYVEQHVADAMGLKTD-PISSQVIARDRHAMYFSV 228 (435)
Q Consensus 160 ~~~~l~r~~~rl~~~~~~~~~~~lgGAvGt~~~~-------~---~~~~~~~a~~LGl~~~-~~~~~~~~rd~~~e~~~~ 228 (435)
T Consensus 159 w~~el~r~~~rL~~~~~~~~~~~~~GAvGt~a~~~~~~~~~~~~~~~l~~~~a~~lgl~~~~~~~~q~~~Rd~~ae~~~~ 238 (436)
T cd03302 159 WIQDLLMDLRNLERLRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKVYPVTGQTYSRKVDIDVLNA 238 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999999996122213678733012045424674688999999999734887678885676873789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHCCCCC
Q ss_conf 87764468899999999516787600025644654201232102415678775211233431002354311-43135432
Q gi|254780974|r 229 LGVIASSIERVATEIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVA-LWHERDIS 307 (435)
Q Consensus 229 l~~~~~~l~kia~Dl~~l~~~eigei~ep~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~-~~~erd~~ 307 (435)
T Consensus 239 La~ia~~l~kia~di~~l~~--~~Ev~E~f~~gq~GSStMPHKrNPi~~E~i~~lar~~~~~~~~~~~~~~~~whERd~~ 316 (436)
T cd03302 239 LSSLGATAHKIATDIRLLAN--LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAAQTASTQWFERTLD 316 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999988999998815--9817530489998758777451759899999999999985689998755543346786
Q ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 10155541720457899999998742310043735799998644583789999999987299989999999999999998
Q gi|254780974|r 308 HSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWK 387 (435)
Q Consensus 308 ~~~~~~~~l~~~~~~~~~~l~~~~~ll~~L~vn~erm~~nl~~s~g~i~se~i~~~L~~~Gig~~~Ah~~v~~~a~~a~~ 387 (435)
T Consensus 317 ~s~~er~~lpe~~~l~~~~l~~~~~~l~~L~V~~~~M~~Nl~~~~gli~se~vm~~L~~~g~gR~~Ah~~V~~~a~~a~~ 396 (436)
T cd03302 317 DSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMAAVKAGGDRQDAHERIRVLSHQAAA 396 (436)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 20899889889999999999999999807989899999999760688999999999987699999999999999999999
Q ss_pred CC------CCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHHCC
Q ss_conf 19------9989998507432305998999985188988501
Q gi|254780974|r 388 NG------AIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKH 423 (435)
Q Consensus 388 ~~------~~l~e~l~~d~~i~~~l~~~eL~~~ldP~~~~g~ 423 (435)
T Consensus 397 ~~~~~~~~~~l~e~~~~d~~~~--l~~~el~~lldP~~ylG~ 436 (436)
T cd03302 397 VVKQEGGDNDLIERIKNDAYFK--PIWDELDALLDPKTFIGR 436 (436)
T ss_pred HHHHCCCCCHHHHHHHCCCCCC--CCHHHHHHHHCHHHCCCC
T ss_conf 9885467612999975498779--999999986498843699