HHsearch alignment for GI: 254780975 and conserved domain: CHL00162

Probab=93.05  E-value=0.78  Score=25.64  Aligned_cols=113  Identities=18%  Similarity=0.272  Sum_probs=78.9

Q ss_pred             CCHHHHHHHHHHCCCEEEEEEECCCCHH-HHHHHHHHCCEEEEEEE-ECCCCCCCCC-CHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             2158999867764982599852333447-89988620140289983-0677653322-0135778998654313865269
Q gi|254780975|r   97 PHIRRSLRTIHAMGKKTGVAINPETPVA-ILEDVIDEIDMILIMTV-NPGFGGQQLI-ESTIPKIRQAKALIGKRSISLE  173 (224)
Q Consensus        97 ~~~~~~i~~i~~~g~k~Giai~p~T~~~-~i~~~l~~~D~vliM~V-~PG~~Gq~f~-~~~l~kI~~l~~~~~~~~~~I~  173 (224)
T Consensus       121 PD~~etl~Aae~L-v~eGF~VlpY~~dD~v~akrLe~~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~------e~~~vPvI  193 (267)
T CHL00162        121 PDPIGTLKAAEFL-VRKGFTVLPYINADPVLAKQLEDIGCATVMPLGSPIGSGQGLQNLLNLQIII------ENAKIPVI  193 (267)
T ss_pred             CCHHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHH------HCCCCCEE
T ss_conf             8878999999999-9789999895489989999998659868863455123688758999999999------64899889


Q ss_pred             EECCCC-HHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH
Q ss_conf             815899-8899999967998999742663789989999999999
Q gi|254780975|r  174 VDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL  216 (224)
Q Consensus       174 vDGGvn-~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l~~l  216 (224)
T Consensus       194 VDAGiG~pSdAa~aMElG~DaVL~NTAIA~A~dPv~MA~A~k~A  237 (267)
T CHL00162        194 IDAGIGTPSEASQAMELGASGVLLNTAVAKAKNPEQMAKAMKLA  237 (267)
T ss_pred             EECCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH
T ss_conf             96898967888999974677787016767169989999999999