HHsearch alignment for GI: 254780975 and conserved domain: COG0352
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism].
Probab=98.72 E-value=2.3e-06 Score=61.00 Aligned_cols=183 Identities=17% Similarity=0.191 Sum_probs=128.1
Q ss_pred HHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCCCCEEEEECCCCCCH
Q ss_conf 99999999659989999734263458434178999986412564168567885120336764047760799970664215
Q gi|254780975|r 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99 (224)
Q Consensus 20 ~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~d~i~~H~E~~~~~ 99 (224)
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~---~-~~~a~~~~~lc-~~~~v~liINd~~dlA~---~~~AdGV--HlGq~D~~ 93 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEE---Y-LALAEKLRALC-QKYGVPLIINDRVDLAL---AVGADGV--HLGQDDMP 93 (211)
T ss_pred HHHHHHHHHCCCEEEEEECCCCCHHH---H-HHHHHHHHHHH-HHHCCEEEECCCHHHHH---HCCCCEE--EECCCCCC
T ss_conf 99999999679949998028987499---9-99999999999-98198099668399997---6799889--70876545
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH-CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 899986776498259985233344789988620-1402899830677653322013577899865431386526981589
Q gi|254780975|r 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178 (224)
Q Consensus 100 ~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~-~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGv 178 (224)
T Consensus 94 ~~~ar~~~~~~~iIG~S~h---~~eea~~A~~~g~DYv~~GpifpT~tK~~~~~~G~~~l~~~~~~~~---iP~vAIGGi 167 (211)
T COG0352 94 LAEARELLGPGLIIGLSTH---DLEEALEAEELGADYVGLGPIFPTSTKPDAPPLGLEGLREIRELVN---IPVVAIGGI 167 (211)
T ss_pred HHHHHHHCCCCCEEEEECC---CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCC---CCEEEECCC
T ss_conf 5889974199978983049---9999999876399999988867889998877467899999998279---998998488
Q ss_pred CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 9889999996799899974266378998999999999999
Q gi|254780975|r 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218 (224)
Q Consensus 179 n~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l~~l~~ 218 (224)
T Consensus 168 ~~~nv~~v~~~Ga~gVAvvsai~~a~d~~~a~~~~~~~~~ 207 (211)
T COG0352 168 NLENVPEVLEAGADGVAVVSAITSAADPAAAAKALRNALE 207 (211)
T ss_pred CHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9999999998298769726686607988999999999987