HHsearch alignment for GI: 254780975 and conserved domain: PRK00042

>PRK00042 tpiA triosephosphate isomerase; Provisional.
Probab=94.91  E-value=0.34  Score=27.93  Aligned_cols=194  Identities=13%  Similarity=0.233  Sum_probs=108.6

Q ss_pred             CCCCEEECHHHHCCCHHHHHHHHHHHHHCCCCEE-EEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECC----
Q ss_conf             9798188170632588999999999996599899-99734263458434178999986412564168567885120----
Q gi|254780975|r    1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQI-HFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSID----   75 (224)
Q Consensus         1 M~k~~~IspSil~~d~~~l~~~i~~l~~~~~d~i-HiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~----   75 (224)
T Consensus         1 MrkkiIiaNWKmn~~~~~~~~~~~~l~~~-~~~~~~~~v---~i~Pp~~~L~~~~~~~~-~~~----i~igaQn~~~~~~   71 (251)
T PRK00042          1 MRKPIIAGNWKMNKTLAEAKELVEELAAL-LPDADGVEV---AVAPPFTYLSSVKEALE-GSN----LKLGAQNVHFEDS   71 (251)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHH-CCCCCCCEE---EEECCHHHHHHHHHHHC-CCC----CEEEEEECCCCCC
T ss_conf             99888999735488999999999999974-666689879---99799999999999827-999----6799725787777


Q ss_pred             -HH-----HHHHCCCCCCEEEE--------ECCCCCCHHHHHHHHHHCCCEEEEEEECC-------CCHH----HHHHHH
Q ss_conf             -33-----67640477607999--------70664215899986776498259985233-------3447----899886
Q gi|254780975|r   76 -SH-----INIIADAGCDIITF--------HPESSPHIRRSLRTIHAMGKKTGVAINPE-------TPVA----ILEDVI  130 (224)
Q Consensus        76 -~~-----i~~~~~~g~d~i~~--------H~E~~~~~~~~i~~i~~~g~k~Giai~p~-------T~~~----~i~~~l  130 (224)
T Consensus        72 Ga~TGeiSa~mL~d~G~~yviiGHSERR~~f~Et~~~i~~K~~~al~~~l~pI~CIGE~~~~r~~g~~~~~l~~Ql~~~l  151 (251)
T PRK00042         72 GAFTGEISPAMLKELGVKYVIIGHSERRTYFGETDELVNKKVKAALKHGLTPILCVGETLEEREAGKTEEVVARQLEAAL  151 (251)
T ss_pred             CCCCCCCCHHHHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf             67757560999997599979975588776469987999999999998699289993673886546787899999999999


Q ss_pred             HHCCE----EEEEEEEC----CCCCCCCCCHHHHHH-HHHHHHHH----C--CCCEEEEECCCCHHHHHHHHH-CCCCEE
Q ss_conf             20140----28998306----776533220135778-99865431----3--865269815899889999996-799899
Q gi|254780975|r  131 DEIDM----ILIMTVNP----GFGGQQLIESTIPKI-RQAKALIG----K--RSISLEVDGGVTSRNIKSLVQ-AGADLL  194 (224)
Q Consensus       131 ~~~D~----vliM~V~P----G~~Gq~f~~~~l~kI-~~l~~~~~----~--~~~~I~vDGGvn~~~i~~l~~-~Gad~~  194 (224)
T Consensus       152 ~~~~~~~~~~iiIAYEPvWAIG-TG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~i~IlYGGSVn~~N~~~i~~~~~vDG~  230 (251)
T PRK00042        152 AGLGAEDFANLVIAYEPVWAIG-TGKTATPEQAQEVHAFIRKVLAELYAEVAEKVRILYGGSVKPDNAAELFAQPDIDGA  230 (251)
T ss_pred             HCCCHHHCCCEEEEECCHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCEE
T ss_conf             6689877053599967577507-999999999999999999999986052305753887177899899999668899979


Q ss_pred             EECHHHHCCC
Q ss_conf             9742663789
Q gi|254780975|r  195 VVGSSFFNQK  204 (224)
Q Consensus       195 V~Gsaif~~~  204 (224)
T Consensus       231 LVGgASL~~~  240 (251)
T PRK00042        231 LVGGASLKAE  240 (251)
T ss_pred             EECHHHCCHH
T ss_conf             8515867989