HHsearch alignment for GI: 254780975 and conserved domain: PRK00042
>PRK00042 tpiA triosephosphate isomerase; Provisional.
Probab=94.91 E-value=0.34 Score=27.93 Aligned_cols=194 Identities=13% Similarity=0.233 Sum_probs=108.6
Q ss_pred CCCCEEECHHHHCCCHHHHHHHHHHHHHCCCCEE-EEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECC----
Q ss_conf 9798188170632588999999999996599899-99734263458434178999986412564168567885120----
Q gi|254780975|r 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQI-HFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSID---- 75 (224)
Q Consensus 1 M~k~~~IspSil~~d~~~l~~~i~~l~~~~~d~i-HiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~---- 75 (224)
T Consensus 1 MrkkiIiaNWKmn~~~~~~~~~~~~l~~~-~~~~~~~~v---~i~Pp~~~L~~~~~~~~-~~~----i~igaQn~~~~~~ 71 (251)
T PRK00042 1 MRKPIIAGNWKMNKTLAEAKELVEELAAL-LPDADGVEV---AVAPPFTYLSSVKEALE-GSN----LKLGAQNVHFEDS 71 (251)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHH-CCCCCCCEE---EEECCHHHHHHHHHHHC-CCC----CEEEEEECCCCCC
T ss_conf 99888999735488999999999999974-666689879---99799999999999827-999----6799725787777
Q ss_pred -HH-----HHHHCCCCCCEEEE--------ECCCCCCHHHHHHHHHHCCCEEEEEEECC-------CCHH----HHHHHH
Q ss_conf -33-----67640477607999--------70664215899986776498259985233-------3447----899886
Q gi|254780975|r 76 -SH-----INIIADAGCDIITF--------HPESSPHIRRSLRTIHAMGKKTGVAINPE-------TPVA----ILEDVI 130 (224)
Q Consensus 76 -~~-----i~~~~~~g~d~i~~--------H~E~~~~~~~~i~~i~~~g~k~Giai~p~-------T~~~----~i~~~l 130 (224)
T Consensus 72 Ga~TGeiSa~mL~d~G~~yviiGHSERR~~f~Et~~~i~~K~~~al~~~l~pI~CIGE~~~~r~~g~~~~~l~~Ql~~~l 151 (251)
T PRK00042 72 GAFTGEISPAMLKELGVKYVIIGHSERRTYFGETDELVNKKVKAALKHGLTPILCVGETLEEREAGKTEEVVARQLEAAL 151 (251)
T ss_pred CCCCCCCCHHHHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 67757560999997599979975588776469987999999999998699289993673886546787899999999999
Q ss_pred HHCCE----EEEEEEEC----CCCCCCCCCHHHHHH-HHHHHHHH----C--CCCEEEEECCCCHHHHHHHHH-CCCCEE
Q ss_conf 20140----28998306----776533220135778-99865431----3--865269815899889999996-799899
Q gi|254780975|r 131 DEIDM----ILIMTVNP----GFGGQQLIESTIPKI-RQAKALIG----K--RSISLEVDGGVTSRNIKSLVQ-AGADLL 194 (224)
Q Consensus 131 ~~~D~----vliM~V~P----G~~Gq~f~~~~l~kI-~~l~~~~~----~--~~~~I~vDGGvn~~~i~~l~~-~Gad~~ 194 (224)
T Consensus 152 ~~~~~~~~~~iiIAYEPvWAIG-TG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~i~IlYGGSVn~~N~~~i~~~~~vDG~ 230 (251)
T PRK00042 152 AGLGAEDFANLVIAYEPVWAIG-TGKTATPEQAQEVHAFIRKVLAELYAEVAEKVRILYGGSVKPDNAAELFAQPDIDGA 230 (251)
T ss_pred HCCCHHHCCCEEEEECCHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCEE
T ss_conf 6689877053599967577507-999999999999999999999986052305753887177899899999668899979
Q ss_pred EECHHHHCCC
Q ss_conf 9742663789
Q gi|254780975|r 195 VVGSSFFNQK 204 (224)
Q Consensus 195 V~Gsaif~~~ 204 (224)
T Consensus 231 LVGgASL~~~ 240 (251)
T PRK00042 231 LVGGASLKAE 240 (251)
T ss_pred EECHHHCCHH
T ss_conf 8515867989