HHsearch alignment for GI: 254780975 and conserved domain: PRK05742

Probab=97.66  E-value=0.00066  Score=45.30  Aligned_cols=104  Identities=19%  Similarity=0.398  Sum_probs=67.1

Q ss_pred             CEEEE---ECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH-HCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf             07999---7066421589998677649825998523334478998862-0140289983067765332201357789986
Q gi|254780975|r   87 DIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPKIRQAK  162 (224)
Q Consensus        87 d~i~~---H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~-~~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~  162 (224)
T Consensus       161 d~iLiKdNHi~~~g~i~~~v~~~~~~~~~~kIeVEv~tl-~q~~~a~~~gaDiI~L---------Dnm---s~~~lk~av  227 (277)
T PRK05742        161 DAFLIKENHIAACGGIAQAVAAAHRIAPGKPVEVEVESL-DELRQALAAGADIVML---------DEL---SLDDMREAV  227 (277)
T ss_pred             CEEEEECCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCH-HHHHHHHHCCCCEEEE---------CCC---CHHHHHHHH
T ss_conf             358974546555067999999999848997269996779-9999987469989998---------699---999999999


Q ss_pred             HHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCC
Q ss_conf             543138652698158998899999967998999742663789
Q gi|254780975|r  163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK  204 (224)
Q Consensus       163 ~~~~~~~~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif~~~  204 (224)
T Consensus       228 ~~~~-~~~~iEaSGGI~~~ni~~yA~tGvD~IS~galt~~a~  268 (277)
T PRK05742        228 RLTA-GRAKLEASGGINETTLRVIAETGVDYISIGAMTKDVK  268 (277)
T ss_pred             HHHC-CCEEEEEECCCCHHHHHHHHHCCCCEEECCHHHCCCC
T ss_conf             9747-9748999889999999999974999998880106996