HHsearch alignment for GI: 254780975 and conserved domain: PRK06543

Probab=97.11  E-value=0.006  Score=39.17  Aligned_cols=92  Identities=23%  Similarity=0.473  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHC-CCEEEEEEECCCCHHHHHHHHH-HCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             58999867764-9825998523334478998862-014028998306776533220135778998654313865269815
Q gi|254780975|r   99 IRRSLRTIHAM-GKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG  176 (224)
Q Consensus        99 ~~~~i~~i~~~-g~k~Giai~p~T~~~~i~~~l~-~~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDG  176 (224)
T Consensus       179 ~~~~i~~~r~~~~~~~~IeVEv~-~l~~~~~a~~~g~D~ImL---------Dnm---s~~~i~~av~~i~~-~~~lEaSG  244 (281)
T PRK06543        179 LTEALRHVRAQLGHTTHVEVEVD-RLDQIEPVLAAGVDTIML---------DNF---TLDQLREGVELIDG-RAIVEASG  244 (281)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEEC-CHHHHHHHHHCCCCEEEE---------CCC---CHHHHHHHHHHHCC-CEEEEEEC
T ss_conf             99999999975899870999966-788799999749999997---------798---99999999997579-37999988


Q ss_pred             CCCHHHHHHHHHCCCCEEEECHHHHCCC
Q ss_conf             8998899999967998999742663789
Q gi|254780975|r  177 GVTSRNIKSLVQAGADLLVVGSSFFNQK  204 (224)
Q Consensus       177 Gvn~~~i~~l~~~Gad~~V~Gsaif~~~  204 (224)
T Consensus       245 gI~~~ni~~yA~tGVD~IS~galt~s~~  272 (281)
T PRK06543        245 NVSLNTVPAIASTGVDVISVGALTHSVR  272 (281)
T ss_pred             CCCHHHHHHHHHCCCCEEECCHHCCCCC
T ss_conf             9999999999973999998382006997