HHsearch alignment for GI: 254780975 and conserved domain: PRK07259
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed.
Probab=98.01 E-value=0.00015 Score=49.41 Aligned_cols=154 Identities=15% Similarity=0.267 Sum_probs=92.9
Q ss_pred CCCCEEEEEEEEEECCHHH---HHHCCC-CCCEEEEECC-----C--------CCCHHHHHHHHHHCCCEE-EEEEECCC
Q ss_conf 2564168567885120336---764047-7607999706-----6--------421589998677649825-99852333
Q gi|254780975|r 60 YSDSVFDCHLMISSIDSHI---NIIADA-GCDIITFHPE-----S--------SPHIRRSLRTIHAMGKKT-GVAINPET 121 (224)
Q Consensus 60 ~t~~~~dvHLMv~~P~~~i---~~~~~~-g~d~i~~H~E-----~--------~~~~~~~i~~i~~~g~k~-Giai~p~T 121 (224)
T Consensus 89 ~~~~pvi~si~~~~~~d~~~~~~~l~~~~~ad~ielNiScPn~~~~g~~~~~~~~~l~~i~~~v~~~~~~Pv~vKlsP~~ 168 (301)
T PRK07259 89 EFDTPIIANIAGSTPEEYVEVAEKLSKAPNVDAIELNISCPNVKHGGMAFGTDPELAYEVVKAVKSVSKVPVIVKLTPNV 168 (301)
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf 06998799737677689999999864556888899965478888526660879999999999998734897799807871
Q ss_pred -CHHHHHHHHHH--CCEEEEEEE------------------ECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-
Q ss_conf -44789988620--140289983------------------06776533220135778998654313865269815899-
Q gi|254780975|r 122 -PVAILEDVIDE--IDMILIMTV------------------NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT- 179 (224)
Q Consensus 122 -~~~~i~~~l~~--~D~vliM~V------------------~PG~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGvn- 179 (224)
T Consensus 169 ~~i~~ia~~~~~~gadgvv~~Nt~~~~~id~~~~~p~~~~~~GGlSG~~l~~~al~~v~~~~~~~---~ipIig~GGI~s 245 (301)
T PRK07259 169 TDIVEIAKAAEEAGADGLSLINTLKGMAIDIKTRKPILANVTGGLSGPAIKPIALRMVYQVAKAV---DIPIIGMGGIST 245 (301)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC---CCCEEEECCCCC
T ss_conf 21999999999759988999567767653235677433578886347335189999999998516---988897679799
Q ss_pred HHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 889999996799899974266378998999999999999
Q gi|254780975|r 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218 (224)
Q Consensus 180 ~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l~~l~~ 218 (224)
T Consensus 246 ~~da~e~i~aGAs~VQv~Tav~~Gp~--~~~~i~~~L~~ 282 (301)
T PRK07259 246 AEDAIEFMMAGASAVQVGTANFIDPY--AFPEIIEGLEA 282 (301)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHCCCH--HHHHHHHHHHH
T ss_conf 99999999839879872123314906--99999999999