HHsearch alignment for GI: 254780975 and conserved domain: PRK10415
>PRK10415 tRNA-dihydrouridine synthase B; Provisional.
Probab=94.32 E-value=0.47 Score=27.05 Aligned_cols=172 Identities=16% Similarity=0.184 Sum_probs=92.8
Q ss_pred HHHCCCCEEEEEEECCEECCCCCCCH-H-HHHHHHHCCCCEEEEEEEEEECCHHH---HHHCCCCCCEEEEECCC-----
Q ss_conf 99659989999734263458434178-9-99986412564168567885120336---76404776079997066-----
Q gi|254780975|r 26 ITKAGAKQIHFDVMDGCFVPNISFGA-D-VIRSLRSYSDSVFDCHLMISSIDSHI---NIIADAGCDIITFHPES----- 95 (224)
Q Consensus 26 l~~~~~d~iHiDImDg~fvpn~~~~~-~-~i~~i~~~t~~~~dvHLMv~~P~~~i---~~~~~~g~d~i~~H~E~----- 95 (224)
T Consensus 29 ~~~~Ga~l~~TEmv~a~---~~~~~~~~~~~~~~~~~~~~~~~vQl~G~dp~~~a~Aa~~~~~~g~~~IDiN~GCP~~kV 105 (321)
T PRK10415 29 CYEMGAGLTVSEMMSSN---PQVWESDKSRLRMVHVDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKV 105 (321)
T ss_pred HHHHCCCEEEECCEEEC---HHHHCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
T ss_conf 99988399998758712---777338488986304678898059972699999999999887649998943189998997
Q ss_pred ---------CCCH---HHHHHHHHHC-CC----EEEEEEECCCC-HHHHHHHHHH--CCEEEEEEEECCCCCCCCCC-HH
Q ss_conf ---------4215---8999867764-98----25998523334-4789988620--14028998306776533220-13
Q gi|254780975|r 96 ---------SPHI---RRSLRTIHAM-GK----KTGVAINPETP-VAILEDVIDE--IDMILIMTVNPGFGGQQLIE-ST 154 (224)
Q Consensus 96 ---------~~~~---~~~i~~i~~~-g~----k~Giai~p~T~-~~~i~~~l~~--~D~vliM~V~PG~~Gq~f~~-~~ 154 (224)
T Consensus 106 ~k~g~GsaLl~~p~~~~~iv~a~~~a~~iPVTvKiRlG~~~~~~~~~~~~~~~e~aG~~~itvH---gRT~~q~y~g~ad 182 (321)
T PRK10415 106 NRKLAGSALLQYPDLVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIH---GRTRACLFNGEAE 182 (321)
T ss_pred CCCCCEEEHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE---HHHHHHHHCCCCC
T ss_conf 0798365063398999999999973448746999846888522439999999985698899997---2213443169987
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHH-CCCCEEEECHHHHCCCCH
Q ss_conf 577899865431386526981589-9889999996-799899974266378998
Q gi|254780975|r 155 IPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQ-AGADLLVVGSSFFNQKGE 206 (224)
Q Consensus 155 l~kI~~l~~~~~~~~~~I~vDGGv-n~~~i~~l~~-~Gad~~V~Gsaif~~~d~ 206 (224)
T Consensus 183 w~~i~~vk~---~~~iPvi~NGDI~~~~da~~~l~~tg~dgvMigRgal~nPwi 233 (321)
T PRK10415 183 YDSIRAVKQ---KVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWI 233 (321)
T ss_pred HHHHHHHHH---CCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCHH
T ss_conf 799999985---479978965891999999999986299999975665369877