HHsearch alignment for GI: 254780975 and conserved domain: TIGR00734
>TIGR00734 hisAF_rel hisA/hisF family protein; InterPro: IPR004650 This family of proteins has so far been found in three archaeal species: Methanobacterium thermoautotrophicum, Methanococcus jannaschii, and Archaeoglobus fulgidus. Proteins are homologous to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA) and, with lower similarity, to the cyclase HisF, both of which are enzymes of histidine biosynthesis. Each species with this protein also encodes HisA. However, the function of proteins in this group is unknown..
Probab=93.75 E-value=0.6 Score=26.35 Aligned_cols=179 Identities=11% Similarity=0.233 Sum_probs=121.2
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCC-CCEEEEEEEEEECCH--HHHHHCCCCC
Q ss_conf 0632588999999999996599899997342634584341789999864125-641685678851203--3676404776
Q gi|254780975|r 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDS--HINIIADAGC 86 (224)
Q Consensus 10 Sil~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t-~~~~dvHLMv~~P~~--~i~~~~~~g~ 86 (224)
T Consensus 32 ~~~ss~P~~~ak~~---~e~gar~iY--iADLd~I~G~GdNf~~~~~~~~~~~e~I~D~G--vrS~EdLE~~~f~l~~-~ 103 (230)
T TIGR00734 32 ISKSSDPVDVAKAL---KEIGARSIY--IADLDAIVGLGDNFELVKKVDKVVEELIVDIG--VRSREDLETLKFVLEK-D 103 (230)
T ss_pred EECCCCHHHHHHHH---HHCCCCEEE--EEEHHHHCCCCCHHHHHHHHHHHCCHHEEECC--CCCHHHHHHCCCCCCC-C
T ss_conf 70788878999999---863884686--34100222688548999886322200124135--5684544310367563-5
Q ss_pred CEEEEECCCCCCHHHHHHHHHHCC-CEEEEEE----------ECCCCHHHHHHHHH--HCCEEEEEEEE-CCCCCCCCCC
Q ss_conf 079997066421589998677649-8259985----------23334478998862--01402899830-6776533220
Q gi|254780975|r 87 DIITFHPESSPHIRRSLRTIHAMG-KKTGVAI----------NPETPVAILEDVID--EIDMILIMTVN-PGFGGQQLIE 152 (224)
Q Consensus 87 d~i~~H~E~~~~~~~~i~~i~~~g-~k~Giai----------~p~T~~~~i~~~l~--~~D~vliM~V~-PG~~Gq~f~~ 152 (224)
T Consensus 104 ~R~vVaTETl~~~ell~e~~rnyPPer~VVSlDfK~~~L~~~~l~~~leevrd~l~~f~~~GlI~LdI~sVGt~-~G~n~ 182 (230)
T TIGR00734 104 DRVVVATETLDSTELLKEILRNYPPERIVVSLDFKEKRLDASSLEESLEEVRDLLNSFDLDGLIVLDISSVGTS-KGVNL 182 (230)
T ss_pred CCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-CCCCH
T ss_conf 63688624504678999986158986379998400552000130456888875306631013798336330567-78788
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH-HHCCCCEEEECHHHHCC
Q ss_conf 1357789986543138652698158998899999-96799899974266378
Q gi|254780975|r 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL-VQAGADLLVVGSSFFNQ 203 (224)
Q Consensus 153 ~~l~kI~~l~~~~~~~~~~I~vDGGvn~~~i~~l-~~~Gad~~V~Gsaif~~ 203 (224)
T Consensus 183 ell~~~l~l~e---~---PV~~GGGi~g~EdlEl~~~mGv~avLvatA~HkG 228 (230)
T TIGR00734 183 ELLKKVLELSE---R---PVILGGGIKGVEDLELLKEMGVSAVLVATAVHKG 228 (230)
T ss_pred HHHHHHHHHHC---C---CEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCC
T ss_conf 89998864424---8---7140687367510788885687657553210047