HHsearch alignment for GI: 254780975 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=95.98 E-value=0.027 Score=35.01 Aligned_cols=145 Identities=17% Similarity=0.300 Sum_probs=106.4
Q ss_pred CHHHHHHHHH-CCCCEEEEEE----------EEEE-CCHHHHHHCCCCCCEEEEECCCCCC---HHHHHHHHHHCCC-EE
Q ss_conf 7899998641-2564168567----------8851-2033676404776079997066421---5899986776498-25
Q gi|254780975|r 50 GADVIRSLRS-YSDSVFDCHL----------MISS-IDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGK-KT 113 (224)
Q Consensus 50 ~~~~i~~i~~-~t~~~~dvHL----------Mv~~-P~~~i~~~~~~g~d~i~~H~E~~~~---~~~~i~~i~~~g~-k~ 113 (224)
T Consensus 57 PW~RLR~lk~~~pnT~L~MLLRGQNLlGYRHYADDVVe~FV~~a~~NG~DVFRi-FDALND~RNl~~ai~a~Kk~g~dHv 135 (616)
T TIGR01108 57 PWERLRELKKALPNTKLQMLLRGQNLLGYRHYADDVVEAFVKKAVENGLDVFRI-FDALNDPRNLQKAIEAAKKHGADHV 135 (616)
T ss_pred HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE-ECCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 558999999735787512342045423441584368999999999759808995-1245887789999999997389789
Q ss_pred EEEEECCC-CHHHHHHHHHHCCEEEEEEEE-C---CCCCCCCCC-HHHHHHHHHHHHHHCCC--CEEEEECCCCHHHHHH
Q ss_conf 99852333-447899886201402899830-6---776533220-13577899865431386--5269815899889999
Q gi|254780975|r 114 GVAINPET-PVAILEDVIDEIDMILIMTVN-P---GFGGQQLIE-STIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKS 185 (224)
Q Consensus 114 Giai~p~T-~~~~i~~~l~~~D~vliM~V~-P---G~~Gq~f~~-~~l~kI~~l~~~~~~~~--~~I~vDGGvn~~~i~~ 185 (224)
T Consensus 136 Qg~iSYTtSPvHTl~~yl~la~~L~~~G~DSI~IKDMaGl-LTP~~AYELV~alK~~~~n~pvhLH~H~TtGmA~~Allk 214 (616)
T TIGR01108 136 QGAISYTTSPVHTLEKYLELAKELLEMGVDSICIKDMAGL-LTPKVAYELVSALKKEFGNLPVHLHSHATTGMAEMALLK 214 (616)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-CCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 9997124684367888999999999818860552020046-441589999999974239746886324723379999998
Q ss_pred HHHCCCCEEEE
Q ss_conf 99679989997
Q gi|254780975|r 186 LVQAGADLLVV 196 (224)
Q Consensus 186 l~~~Gad~~V~ 196 (224)
T Consensus 215 A~EAG~d~iDT 225 (616)
T TIGR01108 215 AIEAGADMIDT 225 (616)
T ss_pred HHHCCCCCCHH
T ss_conf 88707880020