HHsearch alignment for GI: 254780975 and conserved domain: TIGR01163
>TIGR01163 rpe ribulose-phosphate 3-epimerase; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Alcaligenes eutrophus two copies of the gene coding for PPE are known , one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process.
Probab=100.00 E-value=0 Score=561.85 Aligned_cols=209 Identities=47% Similarity=0.825 Sum_probs=203.2
Q ss_pred EECHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHC-CCCEEEEEEEEEECCHHHHHHCCC
Q ss_conf 8817063258899999999999659989999734263458434178999986412-564168567885120336764047
Q gi|254780975|r 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVFDCHLMISSIDSHINIIADA 84 (224)
Q Consensus 6 ~IspSil~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~-t~~~~dvHLMv~~P~~~i~~~~~~ 84 (224)
T Consensus 1 ~iAPSILsADf~rLgee~~~v~~AGaD~iH~DVMDGHFVPNlT~Gp~v~~~~r~~g~~~P~DVHLMv~~pd~~~~~Fa~a 80 (216)
T TIGR01163 1 LIAPSILSADFARLGEEVKAVEEAGADLIHVDVMDGHFVPNLTFGPPVLEALRKYGTKLPIDVHLMVENPDRYIEDFAEA 80 (216)
T ss_pred CCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 96512555047779999999996699789986247971771002778999887407952126630357857778899970
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 76079997066421589998677649825998523334478998862014028998306776533220135778998654
Q gi|254780975|r 85 GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164 (224)
Q Consensus 85 g~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~~~ 164 (224)
T Consensus 81 GA~~I~vH~Ea~~h~~R~l~~Ik~~G~~AG~v~NP~TPl~~~~~~L~~~D~VLlMSVnPGFgGQkFIP~~~~Kir~~R~~ 160 (216)
T TIGR01163 81 GADIITVHAEATEHIHRLLQLIKELGAKAGIVLNPATPLEALEYVLEDVDLVLLMSVNPGFGGQKFIPETLEKIRELRKM 160 (216)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 89989984377626799999999718970688679999878998987629899887607998841105789999999999
Q ss_pred HH--CCC--CEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCC--CHHHHHHHHH
Q ss_conf 31--386--52698158998899999967998999742663789--9899999999
Q gi|254780975|r 165 IG--KRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK--GEISYAKRLN 214 (224)
Q Consensus 165 ~~--~~~--~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif~~~--d~~~~~~~l~ 214 (224)
T Consensus 161 id~~~~~~~~~ieVDGGv~~~ni~~~~~AGAD~~VaGSaiF~~~s~d~~~~i~~lr 216 (216)
T TIGR01163 161 IDKLELGLSILIEVDGGVNEDNIAEVAEAGADILVAGSAIFGADSLDYKEAIRSLR 216 (216)
T ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHCC
T ss_conf 98602799558997179897679999975898999831020888668799997339