HHsearch alignment for GI: 254780975 and conserved domain: TIGR01740
>TIGR01740 pyrF orotidine 5'-phosphate decarboxylase; InterPro: IPR014732 Orotidine 5'-phosphate decarboxylase (OMPdecase) (4.1.1.23 from EC) , catalyzes the last step in the de novo biosynthesis of pyrimidines, the decarboxylation of OMP into UMP. In higher eukaryotes OMPdecase is part, with orotate phosphoribosyltransferase, of a bifunctional enzyme, while the prokaryotic and fungal OMPdecases are monofunctional proteins. Some parts of the sequence of OMPdecase are well conserved across species. The best conserved region is located in the N-terminal half of OMPdecases and is centred around a lysine residue which is essential for the catalytic function of the enzyme..
Probab=97.00 E-value=0.0036 Score=40.55 Aligned_cols=194 Identities=16% Similarity=0.245 Sum_probs=110.9
Q ss_pred HHCCCHHHHHHHHHHHHHCC--CC--E--EEEEEECCEECCCCCCC-HHHHHHHHHCC---CCEEEEEEEEEE-CC---H
Q ss_conf 63258899999999999659--98--9--99973426345843417-89999864125---641685678851-20---3
Q gi|254780975|r 11 ILAADFSRLGEEISNITKAG--AK--Q--IHFDVMDGCFVPNISFG-ADVIRSLRSYS---DSVFDCHLMISS-ID---S 76 (224)
Q Consensus 11 il~~d~~~l~~~i~~l~~~~--~d--~--iHiDImDg~fvpn~~~~-~~~i~~i~~~t---~~~~dvHLMv~~-P~---~ 76 (224)
T Consensus 2 ~vALD~~~~~e~l~~a~~~~~~~~v~~~Kvg~~l~~-------~~~~~~~~~~L~~~~~KHNf~if~D~Kf~DIpnTv~~ 74 (233)
T TIGR01740 2 IVALDVTTKEEALKLADSLGPEIDVLVIKVGIDLLL-------SGGYEKIIEELAKLNKKHNFLIFLDLKFADIPNTVKL 74 (233)
T ss_pred EEECCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHH-------CCCCHHHHHHHHHHHCCCCCEEEECCEECCCCHHHHH
T ss_conf 686238998999999975046277777751423333-------2784889999999745688203212031366156899
Q ss_pred HHHH---HCCCCCCEEEEECCCCCC-HHHHHHHHHHCCC-EEE-EEEECCCCHHH---HHHHHHH-CCEEEEEEEECCCC
Q ss_conf 3676---404776079997066421-5899986776498-259-98523334478---9988620-14028998306776
Q gi|254780975|r 77 HINI---IADAGCDIITFHPESSPH-IRRSLRTIHAMGK-KTG-VAINPETPVAI---LEDVIDE-IDMILIMTVNPGFG 146 (224)
Q Consensus 77 ~i~~---~~~~g~d~i~~H~E~~~~-~~~~i~~i~~~g~-k~G-iai~p~T~~~~---i~~~l~~-~D~vliM~V~PG~~ 146 (224)
T Consensus 75 ~~~~G~y~~~~~~~~~~vH~~~G~~~~~~~~~~a~~~~~~~~~ll~V~~ltS~g~~d~~~~~~~~~~~~~~~~A~~~~~~ 154 (233)
T TIGR01740 75 QYESGVYKIKQGADMVNVHGVAGKESVEAAKEAASEFSTSGRGLLAVTELTSKGSEDLELEYGEDTEEKVVEIAKEAKEF 154 (233)
T ss_pred HHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 97508641217745899720150789999998702566668737999875179813389998888999999998616665
Q ss_pred CCCCCCHHHHHHHHHHHHHHC---------CCCEEE--EECC--CCHHHHHHHHHCCCCEEEECHHHHC-CCCHHHHHHH
Q ss_conf 533220135778998654313---------865269--8158--9988999999679989997426637-8998999999
Q gi|254780975|r 147 GQQLIESTIPKIRQAKALIGK---------RSISLE--VDGG--VTSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKR 212 (224)
Q Consensus 147 Gq~f~~~~l~kI~~l~~~~~~---------~~~~I~--vDGG--vn~~~i~~l~~~Gad~~V~Gsaif~-~~d~~~~~~~ 212 (224)
T Consensus 155 G---l~G~~~~~~~~~~~~~~~G~~~~~~tPGir~~~~g~~~dQ~~~~~~~~a~~~g~D~iiVGR~Iy~~~~dP~~aa~~ 231 (233)
T TIGR01740 155 G---LIGPVCSAEEAKEIRKITGSDFLILTPGIRLASKGDADDQQRVVTLEDAIEAGADVIIVGRGIYKKAEDPVEAAKK 231 (233)
T ss_pred C---CCCEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCHHCCCCCHHHHHHH
T ss_conf 3---3210114677865632058870786077148988878886443778999860499899878210138786899986
Q ss_pred HH
Q ss_conf 99
Q gi|254780975|r 213 LN 214 (224)
Q Consensus 213 l~ 214 (224)
T Consensus 232 i~ 233 (233)
T TIGR01740 232 IR 233 (233)
T ss_pred CC
T ss_conf 09