HHsearch alignment for GI: 254780975 and conserved domain: TIGR03128
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=99.68 E-value=1e-14 Score=114.31 Aligned_cols=196 Identities=18% Similarity=0.284 Sum_probs=145.4
Q ss_pred HCCCHHHHHHHHHHHHHC--CCCEEEEEEECCEECCC-CCCCHHHHHHHHH-CCCCEEEEEEEEEE-CCHHHHHHCCCCC
Q ss_conf 325889999999999965--99899997342634584-3417899998641-25641685678851-2033676404776
Q gi|254780975|r 12 LAADFSRLGEEISNITKA--GAKQIHFDVMDGCFVPN-ISFGADVIRSLRS-YSDSVFDCHLMISS-IDSHINIIADAGC 86 (224)
Q Consensus 12 l~~d~~~l~~~i~~l~~~--~~d~iHiDImDg~fvpn-~~~~~~~i~~i~~-~t~~~~dvHLMv~~-P~~~i~~~~~~g~ 86 (224)
T Consensus 4 vALD~~~~~~A~~i~~~~~~~v~~ikv----G~--~L~~~~G~~~v~~lk~~~p~~~I~~DlK~~D~g~~~~~~~~~~Ga 77 (206)
T TIGR03128 4 LALDLLDIEEALELAEKVADYVDIIEI----GT--PLIKNEGIEAVKEMKEAFPDRKVLADLKTMDAGEYEAEQAFAAGA 77 (206)
T ss_pred EEECCCCHHHHHHHHHHHCCCCCEEEE----CC--HHHHHHCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCC
T ss_conf 995799999999999970355629998----96--999976899999999878999799995044743899999997289
Q ss_pred CEEEEECCCCCC-HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 079997066421-5899986776498259985233344789988620140289983067765332201357789986543
Q gi|254780975|r 87 DIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165 (224)
Q Consensus 87 d~i~~H~E~~~~-~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~~~~ 165 (224)
T Consensus 78 d~itVh~~~~~~ti~~a~~~a~~~~~~v~vdl~~~~~~~~~a~~~~~~g-~d~v~~h~g~d~~~~~~~~~~~~~~~~~~~ 156 (206)
T TIGR03128 78 DIVTVLGVADDATIKGAVKAAKKHGKEVQVDLINVKDKVKRAKELKELG-ADYIGVHTGLDEQAKGQNPFEDLQTILKLV 156 (206)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCC-CCEEEEECCCCHHHCCCCCHHHHHHHHHCC
T ss_conf 8999943489799999999999739979999747898899999999758-988995025004432679889999998625
Q ss_pred HCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH
Q ss_conf 138652698158998899999967998999742663789989999999999
Q gi|254780975|r 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216 (224)
Q Consensus 166 ~~~~~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l~~l 216 (224)
T Consensus 157 ~--~~~i~v~gGi~~~t~~~ai~~Gad~vVVGR~It~A~dP~~aa~~i~e~ 205 (206)
T TIGR03128 157 K--EARVAVAGGINLDTIPDVIKLGPDIVIVGGAITKAADPAEAARQIRKL 205 (206)
T ss_pred C--CCCEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 7--873636798683569999866999999896124799999999999974