HHsearch alignment for GI: 254780975 and conserved domain: cd00405
>cd00405 PRAI Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.
Probab=98.20 E-value=0.00027 Score=47.73 Aligned_cols=170 Identities=19% Similarity=0.217 Sum_probs=117.0
Q ss_pred HHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCC-CCEEEEEEEEEECCHHHH-HHCCCCCCEEEEECCCCCC
Q ss_conf 99999996599899997342634584341789999864125-641685678851203367-6404776079997066421
Q gi|254780975|r 21 EEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHIN-IIADAGCDIITFHPESSPH 98 (224)
Q Consensus 21 ~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t-~~~~dvHLMv~~P~~~i~-~~~~~g~d~i~~H~E~~~~ 98 (224)
T Consensus 10 ~d~~~~~~~g~d~iGfif~~~S--pR~-i~~~~a~~l~~~~~~~~~~V~Vfvn~~~~~i~~~~~~~~~d~vQlHG~e~~- 85 (203)
T cd00405 10 EDALAAAEAGADAIGFIFAPKS--PRY-VSPEQAREIVAALPPFVKRVGVFVNEDLEEILEIAEELGLDVVQLHGDESP- 85 (203)
T ss_pred HHHHHHHHCCCCEEEEECCCCC--CCE-ECHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCH-
T ss_conf 9999998579998988556998--971-189999999973699853999991683999999998769988998789997-
Q ss_pred HHHHHHHHHHC-CCEEEEEEECCCC--HHHHHHHHHHCCEEEEEEEE---CCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 58999867764-9825998523334--47899886201402899830---677653322013577899865431386526
Q gi|254780975|r 99 IRRSLRTIHAM-GKKTGVAINPETP--VAILEDVIDEIDMILIMTVN---PGFGGQQLIESTIPKIRQAKALIGKRSISL 172 (224)
Q Consensus 99 ~~~~i~~i~~~-g~k~Giai~p~T~--~~~i~~~l~~~D~vliM~V~---PG~~Gq~f~~~~l~kI~~l~~~~~~~~~~I 172 (224)
T Consensus 86 -~-~~~~lk~~~~~~iikai~v~~~~~~~~~~~~~~~~d~~L~Ds~~~~~~GGtG~~fdw~~l~~~~------~--~~p~ 155 (203)
T cd00405 86 -E-YCAQLRARLGLPVIKAIRVKDEEDLEKAAAYAGEVDAILLDSKSGGGGGGTGKTFDWSLLRGLA------S--RKPV 155 (203)
T ss_pred -H-HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEECHHHHHHCC------C--CCCE
T ss_conf -9-9999875059649999614977779999874377758999688887688776533889986212------4--7987
Q ss_pred EEECCCCHHHHHHHHHC-CCCEEEECHHHHCCC
Q ss_conf 98158998899999967-998999742663789
Q gi|254780975|r 173 EVDGGVTSRNIKSLVQA-GADLLVVGSSFFNQK 204 (224)
Q Consensus 173 ~vDGGvn~~~i~~l~~~-Gad~~V~Gsaif~~~ 204 (224)
T Consensus 156 ~LAGGl~~~NV~~ai~~~~p~gvDvsSgvE~~p 188 (203)
T cd00405 156 ILAGGLTPDNVAEAIRLVRPYGVDVSSGVETSP 188 (203)
T ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 997788988999999850998999767015789