HHsearch alignment for GI: 254780975 and conserved domain: cd00429

>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=100.00  E-value=0  Score=477.67  Aligned_cols=208  Identities=48%  Similarity=0.839  Sum_probs=201.8

Q ss_pred             EECHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCC
Q ss_conf             88170632588999999999996599899997342634584341789999864125641685678851203367640477
Q gi|254780975|r    6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG   85 (224)
Q Consensus         6 ~IspSil~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g   85 (224)
T Consensus         1 ~IspSil~ad~~~l~~~i~~~~~~g~d~lHiDimDG~Fvpn~t~g~~~v~~i~~~t~~~~DvHLMv~~P~~~i~~~~~~g   80 (211)
T cd00429           1 KIAPSILSADFANLGEELKRLEEAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMVENPERYIEAFAKAG   80 (211)
T ss_pred             CEEHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf             91573531799999999999997699989995757972786675989999998757997058998718877699999709


Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             60799970664215899986776498259985233344789988620140289983067765332201357789986543
Q gi|254780975|r   86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI  165 (224)
Q Consensus        86 ~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~~~~  165 (224)
T Consensus        81 ~d~I~~H~E~~~~~~~~i~~ik~~g~~~Glal~p~T~~~~l~~~l~~~D~vliMtV~PGf~GQ~f~~~~~~ki~~l~~~~  160 (211)
T cd00429          81 ADIITFHAEATDHLHRTIQLIKELGMKAGVALNPGTPVEVLEPYLDEVDLVLVMSVNPGFGGQKFIPEVLEKIRKLRELI  160 (211)
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             98899864322089999999997398723575489998999999975152279874688788754567999999999999


Q ss_pred             HCC--CCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHH
Q ss_conf             138--652698158998899999967998999742663789989999999
Q gi|254780975|r  166 GKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL  213 (224)
Q Consensus       166 ~~~--~~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l  213 (224)
T Consensus       161 ~~~~~~~~I~vDGGI~~~~i~~l~~~Gad~~V~GS~iF~~~d~~~~i~~l  210 (211)
T cd00429         161 PENNLNLLIEVDGGINLETIPLLAEAGADVLVAGSALFGSDDYAEAIKEL  210 (211)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHH
T ss_conf             86499859999678598999999985999999793775899999999971