HHsearch alignment for GI: 254780975 and conserved domain: cd00429
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=100.00 E-value=0 Score=477.67 Aligned_cols=208 Identities=48% Similarity=0.839 Sum_probs=201.8
Q ss_pred EECHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCC
Q ss_conf 88170632588999999999996599899997342634584341789999864125641685678851203367640477
Q gi|254780975|r 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85 (224)
Q Consensus 6 ~IspSil~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g 85 (224)
T Consensus 1 ~IspSil~ad~~~l~~~i~~~~~~g~d~lHiDimDG~Fvpn~t~g~~~v~~i~~~t~~~~DvHLMv~~P~~~i~~~~~~g 80 (211)
T cd00429 1 KIAPSILSADFANLGEELKRLEEAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMVENPERYIEAFAKAG 80 (211)
T ss_pred CEEHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 91573531799999999999997699989995757972786675989999998757997058998718877699999709
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 60799970664215899986776498259985233344789988620140289983067765332201357789986543
Q gi|254780975|r 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165 (224)
Q Consensus 86 ~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D~vliM~V~PG~~Gq~f~~~~l~kI~~l~~~~ 165 (224)
T Consensus 81 ~d~I~~H~E~~~~~~~~i~~ik~~g~~~Glal~p~T~~~~l~~~l~~~D~vliMtV~PGf~GQ~f~~~~~~ki~~l~~~~ 160 (211)
T cd00429 81 ADIITFHAEATDHLHRTIQLIKELGMKAGVALNPGTPVEVLEPYLDEVDLVLVMSVNPGFGGQKFIPEVLEKIRKLRELI 160 (211)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 98899864322089999999997398723575489998999999975152279874688788754567999999999999
Q ss_pred HCC--CCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHH
Q ss_conf 138--652698158998899999967998999742663789989999999
Q gi|254780975|r 166 GKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213 (224)
Q Consensus 166 ~~~--~~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l 213 (224)
T Consensus 161 ~~~~~~~~I~vDGGI~~~~i~~l~~~Gad~~V~GS~iF~~~d~~~~i~~l 210 (211)
T cd00429 161 PENNLNLLIEVDGGINLETIPLLAEAGADVLVAGSALFGSDDYAEAIKEL 210 (211)
T ss_pred HHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHH
T ss_conf 86499859999678598999999985999999793775899999999971