HHsearch alignment for GI: 254780975 and conserved domain: cd04732
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=98.77 E-value=2.7e-06 Score=60.54 Aligned_cols=183 Identities=15% Similarity=0.176 Sum_probs=128.0
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCCCCEEE
Q ss_conf 63258899999999999659989999734263458434178999986412564168567885120336764047760799
Q gi|254780975|r 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIIT 90 (224)
Q Consensus 11 il~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~d~i~ 90 (224)
T Consensus 26 ~~~gdP~~~a~~~---~~~g~d~l~i~DLdaa~-~~~~~n~~~I~~I~~~~~~pi~vGGGIr-s~~~~~~l~~~Ga~kvv 100 (234)
T cd04732 26 VYSDDPVEVAKKW---EEAGAKWLHVVDLDGAK-GGEPVNLELIEEIVKAVGIPVQVGGGIR-SLEDIERLLDLGVSRVI 100 (234)
T ss_pred EECCCHHHHHHHH---HHCCCCEEEEEECCCHH-HCCCCHHHHHHHHHHHCCCCEEECCCCC-CHHHHHHHHHCCCCEEE
T ss_conf 7579999999999---98699989999675303-0891159999999976795689737717-59999999864887189
Q ss_pred EECCCCCCHHHHHHHHHHCCC-EEEEEEEC---------------CCCHHHHHHHHHH-CCEEEEEEEECCCCCCCCCCH
Q ss_conf 970664215899986776498-25998523---------------3344789988620-140289983067765332201
Q gi|254780975|r 91 FHPESSPHIRRSLRTIHAMGK-KTGVAINP---------------ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIES 153 (224)
Q Consensus 91 ~H~E~~~~~~~~i~~i~~~g~-k~Giai~p---------------~T~~~~i~~~l~~-~D~vliM~V~PG~~Gq~f~~~ 153 (224)
T Consensus 101 i~s~~~~~~~~~~~~~~~~G~q~iv~slD~k~~~~~~~~~~~~~~~~~~~~i~~~~~~g~geiilt~i~~dGt~~G~d~~ 180 (234)
T cd04732 101 IGTAAVKNPELVKELLKEYGGERIVVGLDAKDGKVATKGWLETSEVSLEELAKRFEELGVKAIIYTDISRDGTLSGPNFE 180 (234)
T ss_pred ECCCHHHCHHHHHHHHHHCCCCCEEEEEEEECCCHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH
T ss_conf 71401108278999999829764699999751200016864001351699999997458646998764256653568999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHHHCCCCEEEECHHHHCCC
Q ss_conf 35778998654313865269815899-8899999967998999742663789
Q gi|254780975|r 154 TIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQK 204 (224)
Q Consensus 154 ~l~kI~~l~~~~~~~~~~I~vDGGvn-~~~i~~l~~~Gad~~V~Gsaif~~~ 204 (224)
T Consensus 181 ll~~i~~------~~~~p~i~~GGv~s~~di~~l~~~g~~gvivgsAlh~g~ 226 (234)
T cd04732 181 LYKELAA------ATGIPVIASGGVSSLDDIKALKELGVAGVIVGKALYEGK 226 (234)
T ss_pred HHHHHHH------HCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEHHHHCCC
T ss_conf 9999986------579989998189999999999977998999988987799