HHsearch alignment for GI: 254780975 and conserved domain: pfam01180
>pfam01180 DHO_dh Dihydroorotate dehydrogenase.
Probab=96.92 E-value=0.015 Score=36.65 Aligned_cols=154 Identities=16% Similarity=0.241 Sum_probs=87.2
Q ss_pred CCEEEEEEEEEECCHHHHHHCC--CCCCEEEEECCC-----------CCC-HHHHHHHHHHCCCE-EEEEEECCCC-HHH
Q ss_conf 6416856788512033676404--776079997066-----------421-58999867764982-5998523334-478
Q gi|254780975|r 62 DSVFDCHLMISSIDSHINIIAD--AGCDIITFHPES-----------SPH-IRRSLRTIHAMGKK-TGVAINPETP-VAI 125 (224)
Q Consensus 62 ~~~~dvHLMv~~P~~~i~~~~~--~g~d~i~~H~E~-----------~~~-~~~~i~~i~~~g~k-~Giai~p~T~-~~~ 125 (224)
T Consensus 93 ~~~vi~si~g~~~~d~~~~~~~~~~~ad~iElNiScPn~~~~~~~~~~~~~~~~i~~~v~~~~~~Pv~vKlsp~~~~~~~ 172 (290)
T pfam01180 93 PLGIILSKAGSTVEDYVEVARKIGPFADYLELNVSCPNTPGLRALQTDPELAAILLKVVKEVSKVPVLVKLAPDLTDIVI 172 (290)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
T ss_conf 85378624669999999999999743588999985368876133404298999999998750478738983898774689
Q ss_pred HHHHHHH-----CCEEEE-------EE------------EECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-H
Q ss_conf 9988620-----140289-------98------------306776533220135778998654313865269815899-8
Q gi|254780975|r 126 LEDVIDE-----IDMILI-------MT------------VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-S 180 (224)
Q Consensus 126 i~~~l~~-----~D~vli-------M~------------V~PG~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGvn-~ 180 (224)
T Consensus 173 ~~~a~~~~~a~gv~gi~~~nt~~~~~~~d~~~~~~~~~~~~GGlSG~~i~~~al~~v~~~~~~~~-~~ipIig~GGI~~~ 251 (290)
T pfam01180 173 IDIADVAAGEDGLTGINATNTTVRGMRIDLKTESPILANGTGGLSGPAIKPIALKVIRELYQRVG-PEIPIIGVGGIFTG 251 (290)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCCH
T ss_conf 99999971837768999658734655555556663125678885760678999999999999708-99749998894999
Q ss_pred HHHHHHHHCCCCEEEECHHH-HCCCCHHHHHHHHHHHHH
Q ss_conf 89999996799899974266-378998999999999999
Q gi|254780975|r 181 RNIKSLVQAGADLLVVGSSF-FNQKGEISYAKRLNDLKK 218 (224)
Q Consensus 181 ~~i~~l~~~Gad~~V~Gsai-f~~~d~~~~~~~l~~l~~ 218 (224)
T Consensus 252 ~da~e~i~aGA~~VQv~Tal~~~Gp~~--i~~i~~~L~~ 288 (290)
T pfam01180 252 EDALEKILAGASAVQIGTALIFGGPFI--FPKIIDELPE 288 (290)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHCCCHH--HHHHHHHHHH
T ss_conf 999999983997999858998419179--9999999997