HHsearch alignment for GI: 254780975 and conserved domain: pfam01645

>pfam01645 Glu_synthase Conserved region in glutamate synthase. This family represents a region of the glutamate synthase protein. This region is expressed as a separate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.
Probab=92.76  E-value=0.86  Score=25.38  Aligned_cols=118  Identities=18%  Similarity=0.297  Sum_probs=72.7

Q ss_pred             CCCCEEEEE--CC--CCCCHHHHHHHHHHC--CCEEEEEEECCCCHHHHHHHHH--HCCEEEEEEEECCCCC--CCCCCH
Q ss_conf             776079997--06--642158999867764--9825998523334478998862--0140289983067765--332201
Q gi|254780975|r   84 AGCDIITFH--PE--SSPHIRRSLRTIHAM--GKKTGVAINPETPVAILEDVID--EIDMILIMTVNPGFGG--QQLIES  153 (224)
Q Consensus        84 ~g~d~i~~H--~E--~~~~~~~~i~~i~~~--g~k~Giai~p~T~~~~i~~~l~--~~D~vliM~V~PG~~G--q~f~~~  153 (224)
T Consensus       170 ~G~d~iSP~~h~di~s~edL~~~I~~Lr~~~~~~PVgvKl~~~~~~~~ia~~~aka~~D~I~IdG~eGGTGAaP~~~~d~  249 (367)
T pfam01645       170 PGVGLISPPPHHDIYSIEDLAQLIYDLKEINPKAPISVKLVSGHGVGTIAAGVAKAGADIILIDGHDGGTGASPKTSIKH  249 (367)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH
T ss_conf             99876786334788999999999999984178994599981477689999987536788899717898677554889974


Q ss_pred             ----HHHHHHHHHHHHHC----CCCEEEEECCCC-HHHHHHHHHCCCCEEEECHH-HH
Q ss_conf             ----35778998654313----865269815899-88999999679989997426-63
Q gi|254780975|r  154 ----TIPKIRQAKALIGK----RSISLEVDGGVT-SRNIKSLVQAGADLLVVGSS-FF  201 (224)
Q Consensus       154 ----~l~kI~~l~~~~~~----~~~~I~vDGGvn-~~~i~~l~~~Gad~~V~Gsa-if  201 (224)
T Consensus       250 ~GlP~~~~L~~~~~~L~~~glR~~V~liasGgl~t~~Dv~ka~aLGAD~v~~gt~~m~  307 (367)
T pfam01645       250 AGLPWELALAEVHQTLVENGLRDRVSLIADGGLRTGADVAKAAALGADAVYIGTAALI  307 (367)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             4246999999999999870675764999769978889999999856535423479999