HHsearch alignment for GI: 254780975 and conserved domain: pfam01717
>pfam01717 Meth_synt_2 Cobalamin-independent synthase, Catalytic domain. This is a family of vitamin-B12 independent methionine synthases or 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferases, EC:2.1.1.14 from bacteria and plants. Plants are the only higher eukaryotes that have the required enzymes for methionine synthesis. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to homocysteine. The aligned region makes up the carboxy region of the approximately 750 amino acid protein except in some hypothetical archaeal proteins present in the family, where this region corresponds to the entire length. This domain contains the catalytic residues of the enzyme.
Probab=91.71 E-value=1.1 Score=24.58 Aligned_cols=137 Identities=21% Similarity=0.345 Sum_probs=67.5
Q ss_pred HHHHHHHHHHCCCCEEEEEEECCEECCCCCCC-------HH-----HHHH--HH---HCCCCEEEEEEEEEECCHHHHHH
Q ss_conf 99999999965998999973426345843417-------89-----9998--64---12564168567885120336764
Q gi|254780975|r 19 LGEEISNITKAGAKQIHFDVMDGCFVPNISFG-------AD-----VIRS--LR---SYSDSVFDCHLMISSIDSHINII 81 (224)
Q Consensus 19 l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~-------~~-----~i~~--i~---~~t~~~~dvHLMv~~P~~~i~~~ 81 (224)
T Consensus 156 ~~~ei~~l~~aG~~~iQiDe------P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~H~C~gny~~i~~~l 229 (324)
T pfam01717 156 LRDEVKDLEAAGILVIQIDE------PALREGLPLKKLDWAAYLDWAVAAFRLDTIVAALDTQVHTHVCYSDFNDILDAI 229 (324)
T ss_pred HHHHHHHHHHCCCCEEEECC------HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH
T ss_conf 99999999987998899757------788636644334989999999999998716789998899996688849999999
Q ss_pred CCCCCCEEEEECCCCCC-HHHHHHHHHHCCCEEEEEE-ECCCC----HHHHHH-HHHHCCEE--EEEEEEC--CCCCCCC
Q ss_conf 04776079997066421-5899986776498259985-23334----478998-86201402--8998306--7765332
Q gi|254780975|r 82 ADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAI-NPETP----VAILED-VIDEIDMI--LIMTVNP--GFGGQQL 150 (224)
Q Consensus 82 ~~~g~d~i~~H~E~~~~-~~~~i~~i~~~g~k~Giai-~p~T~----~~~i~~-~l~~~D~v--liM~V~P--G~~Gq~f 150 (224)
T Consensus 230 ~~~~vd~~~lE~~~~~~~~~~~l~~~~-~~k~v~lGvVd~k~~~lE~~e~v~~rI~~aa~~v~~erL~~spdCGf~~l~- 307 (324)
T pfam01717 230 DALDVDVLTIEFARSDMENLEALEEWG-YGKGVGFGVVDIHSPRVPSVEEIKALIKKALDIVPADRLWVNPDCGLKTRP- 307 (324)
T ss_pred HHCCCCEEEEECCCCCCHHHHHHHHCC-CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCC-
T ss_conf 748988898111689811458888479-998499888817899989999999999999984898889987888988498-
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 2013577899865
Q gi|254780975|r 151 IESTIPKIRQAKA 163 (224)
Q Consensus 151 ~~~~l~kI~~l~~ 163 (224)
T Consensus 308 ~e~a~~KL~~~ve 320 (324)
T pfam01717 308 WEEARAALRNMVD 320 (324)
T ss_pred HHHHHHHHHHHHH
T ss_conf 8999999999999