HHsearch alignment for GI: 254780976 and conserved domain: pfam02075

>pfam02075 RuvC Crossover junction endodeoxyribonuclease RuvC.
Probab=97.16  E-value=0.0047  Score=39.11  Aligned_cols=104  Identities=11%  Similarity=0.094  Sum_probs=64.4

Q ss_pred             EEEEECCCCEEEEEEEECCCCE--ECCCEEEECCC------CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-HHHH
Q ss_conf             9999868876899963076511--01210110477------4156898999986516775899721357888884-4799
Q gi|254780976|r   19 IASIDLGTKRIGLAISDPGRRF--AHPRPFLVRKK------VTQTALELLSFITTENIAAFIIGLPLNMNGSEGP-RVHS   89 (160)
Q Consensus        19 iLgiD~G~kriGiAisd~~~~~--a~Pl~~i~~~~------~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-~~~~   89 (160)
T Consensus         1 ILGIDPGl~~tG~avi~~~~~~~~~v~~G~I~t~~~~~~~RL~~I~~~l~~ii~~~~P~~~aiE~~F~~~N~~ta~~lgq   80 (148)
T pfam02075         1 ILGIDPGSRVTGYGVIEHRGRQLSYLTSGVIRTQSDPLPERLLAIFDAVEEVLDTHQPNAVAIEQVFFAKNVDSALKLAQ   80 (148)
T ss_pred             CEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHH
T ss_conf             98878886860799999759847999951597899887999999999999999964998674758777128699999999


Q ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf             99999999840489977998367167999999998698
Q gi|254780976|r   90 TRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNV  127 (160)
Q Consensus        90 v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~  127 (160)
T Consensus        81 aRGvill-~~~~~~i~v~ey----~P~~VKk~itG~G~  113 (148)
T pfam02075        81 ARGVAIL-AAAERGISVFEY----TPSQVKKAVTGNGS  113 (148)
T ss_pred             HHHHHHH-HHHHHCCCEEEE----CHHHHHHHHHCCCC
T ss_conf             9999999-999807980578----88998888737985