HHsearch alignment of GI: 254780976 and MMDB domain: 1nu0_A_
>1nu0_A (A:) Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli}
Probab=100.00 E-value=3e-40 Score=263.84 Aligned_cols=136 Identities=29% Similarity=0.385 Sum_probs=131.5
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 98399998688768999630765110121011047741568989999865167758997213578888844799999999
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVH 95 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~ 95 (160)
++|+||||||+||||+|+||+.+.+|+|++++.+++..+.+..|..++++|+++.||||+|++++|+++++++.++.|++
T Consensus 2 ~krilgiD~G~kriGiAi~d~~~~ia~p~~~i~~~~~~~~~~~l~~li~~~~~~~iViGlP~~~~g~~~~~a~~v~~f~~ 81 (138)
T 1nu0_A 2 SGTLXAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNXDGTEQPLTARARKFAN 81 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97689999179979999947998740140789816772689999998642487389964434777875789999999999
Q ss_pred HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998404899779983671679999999986986445464378998999999999686
Q gi|254780976|r 96 NMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVLDRI 152 (160)
Q Consensus 96 ~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~~ 152 (160)
.|. +.+++||++||||+||++|++.+.+.+++++++++.+|++||++|||+|||+.
T Consensus 82 ~L~-~~~~l~v~~vDEr~TT~~A~~~l~~~~~~~~~~k~~iD~~AA~~ILq~~L~~~ 137 (138)
T 1nu0_A 82 RIH-GRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYXEQG 137 (138)
T ss_dssp HHH-HHHCCCEEEEEEECCCCCC-------CCCCCCCHHHHTTHHHHHHHHHHHHTT
T ss_pred HHH-HHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 999-86299969973664599999999973563210454364999999999999736