HHSEARCH alignment of GI: 254780976 and SCOP domain: d1hjra_

Alignment
>d1hjra_ c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]}
Probab=97.70  E-value=0.0016  Score=39.22  Aligned_cols=99  Identities=14%  Similarity=0.135  Sum_probs=63.3

Q ss_pred             EEEEECCCCEEEEEEEECCCCEEC--CCEEEECCC------CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-HHHH
Q ss_conf             999986887689996307651101--210110477------4156898999986516775899721357888884-4799
Q gi|254780976|r   19 IASIDLGTKRIGLAISDPGRRFAH--PRPFLVRKK------VTQTALELLSFITTENIAAFIIGLPLNMNGSEGP-RVHS   89 (160)
Q Consensus        19 iLgiD~G~kriGiAisd~~~~~a~--Pl~~i~~~~------~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-~~~~   89 (160)
                      |||||+|+.++|.|+-|..+.-..  -.+++..+.      .......+.+++++|+|+.+++=-|.-..+..+. ....
T Consensus         3 ILGIDPGl~~~G~avid~~~~~~~~v~~g~i~t~~~~~~~Rl~~i~~~l~~li~~~~Pd~vaiE~~f~~~n~~sa~~l~~   82 (158)
T d1hjra_           3 ILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQ   82 (158)
T ss_dssp             EEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHH
T ss_pred             EEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCHHHHHHHHH
T ss_conf             99983677865899999649878999952796799876999999999999998534998789874000248899999999


Q ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf             999999998404899779983671679999999
Q gi|254780976|r   90 TRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL  122 (160)
Q Consensus        90 v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l  122 (160)
                      ++--+... -...++||..+    |..+.++..
T Consensus        83 arG~i~l~-a~~~~ipi~e~----~P~~vKk~v  110 (158)
T d1hjra_          83 ARGVAIVA-AVNQELPVFEY----AARQVKQTV  110 (158)
T ss_dssp             HHHHHHHH-HHTTTCCEEEE----EHHHHHHHH
T ss_pred             HHHHHHHH-HHHCCCCEEEC----CHHHHHEEE
T ss_conf             99999999-99808650124----414222014


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: RuvC resolvase
domain: RuvC resolvase
species: Escherichia coli [TaxId: 562]