HHSEARCH alignment of GI: 254780976 and SCOP domain: d3bzka5

Alignment
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.49  E-value=1.2e-06  Score=58.10  Aligned_cols=101  Identities=16%  Similarity=0.239  Sum_probs=74.7

Q ss_pred             CCCCEEEEECC-CCEEEEEEEECCCCEECCCEEEE-C---CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
Q ss_conf             99839999868-87689996307651101210110-4---7741568989999865167758997213578888844799
Q gi|254780976|r   15 PNQPIASIDLG-TKRIGLAISDPGRRFAHPRPFLV-R---KKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHS   89 (160)
Q Consensus        15 ~~~riLgiD~G-~kriGiAisd~~~~~a~Pl~~i~-~---~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~   89 (160)
                      ..++|||+|.| ..-|++|+-|..+.+-- ..++. .   .........|.++++.++|+.|+||     ||+   .++.
T Consensus         3 ~~~~vlg~DPg~r~gck~AvlD~~G~vld-~~viyp~~~~~~~~~a~~~l~~li~k~~p~vIaIG-----NgT---asre   73 (149)
T d3bzka5           3 GPRATLGLDPGLRTGVKVAVVDATGKLLD-TATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIG-----NGT---ASRE   73 (149)
T ss_dssp             CSCCEEEEECCSTTCEEEEEECTTSCEEE-EEEECCSTTTCCHHHHHHHHHHHHHHTTCCEEEEE-----SST---THHH
T ss_pred             CCCEEEEECCCCCCCCEEEEECCCCCEEE-EEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEC-----CCC---CHHH
T ss_conf             88558887888656618999979999899-99984379677999999999999998398699977-----985---2789


Q ss_pred             HHHHHHHHHHH--CCCCCEEEECCCCCHH-----HHHHHHHH
Q ss_conf             99999999840--4899779983671679-----99999998
Q gi|254780976|r   90 TRAFVHNMIDR--KVYVPFVFWDERLTTV-----SAQQILID  124 (160)
Q Consensus        90 v~~f~~~L~~~--~~~l~v~~~DEr~TS~-----~A~~~l~~  124 (160)
                      +..|...|...  ..++++.++||...|.     .|.+.+.+
T Consensus        74 ~~~~v~~l~~~~~~~~i~~~iV~e~gAsvYs~S~~A~~EfP~  115 (149)
T d3bzka5          74 TDKLAGELIKKYPGMKLTKIMVSEAGASVYSASELAAKEFPE  115 (149)
T ss_dssp             HHHHHHHHHHHCGGGCCEEEEECCTTHHHHHTSHHHHHHCTT
T ss_pred             HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCHHHHHHCCC
T ss_conf             999999999857788868999826512543178989987789


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Tex RuvX-like domain-like
domain: Transcriptional accessory factor Tex
species: Pseudomonas aeruginosa [TaxId: 287]