RPSBLAST alignment for GI: 254780976 and conserved domain: TIGR00250
>gnl|CDD|129352 TIGR00250, RNAse_H_YqgF, RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC. Length = 130
Score = 96.0 bits (239), Expect = 4e-21
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 22 IDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNG 81
+D GTK IG+A D A P + + + + ++GLPLNM+G
Sbjct: 3 LDFGTKSIGVAGQDITGWTAQGIPTIKAQDGEPDWSRIEELLKEWTPDKIVVGLPLNMDG 62
Query: 82 SEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAA 141
+EGP + F N ++ + VP V WDERL+TV A+ L R R K+D AA
Sbjct: 63 TEGPLTERAQKFA-NRLEGRFGVPVVLWDERLSTVEAESGLFARGGFRALRKGKIDKAAA 121
Query: 142 ALILQEVLD 150
+ILQ LD
Sbjct: 122 VIILQSYLD 130