HHsearch alignment for GI: 254780977 and conserved domain: TIGR00135
>TIGR00135 gatC glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit; InterPro: IPR003837 Glu-tRNAGln amidotransferase is a heterotrimeric enzyme that is required for correct decoding of glutamine codons during translation. The Glu-tRNA Gln amidotransferase enzyme is an important translational fidelity mechanism replacing incorrectly charged Glu-tRNAGln with the correct Gln-tRANGln via transmidation of the misacylated Glu-tRNAGln . This activity supplements the lack of glutaminyl-tRNA synthetase activity in Gram-positive eubacteria, cyanobacteria, archaea, and organelles .; GO: 0006450 regulation of translational fidelity.
Probab=99.90 E-value=9.2e-24 Score=150.53 Aligned_cols=93 Identities=35% Similarity=0.542 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHH
Q ss_conf 88899999999852778899999999999999999999952354789852112224466778736899998999840833
Q gi|254780977|r 3 IDVVDVKRIAHFSRISIKEEDIPLFLLRLNNTLSVLEKISEVNVEGVEPMVSVVPMKMVHRPDVVCDGDKVESILSNAPH 82 (95)
Q Consensus 3 i~~~~i~~la~LarL~l~eee~~~~~~~l~~il~~v~~l~~vdt~~vep~~~~~~~~~~lReD~~~~~~~~e~~l~nap~ 82 (95)
T Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~il~~~~~~~~~~~~~v~p~~~~~~~~~~lr~d~~~~~~~~~~~~~~~p~ 80 (93)
T TIGR00135 1 ISDEDVKHLAKLARLELSEEEAESFAGDLDEILGFVEQLNEVDTDGVEPMTHPLELSNVLREDEPGEPLSRDDILKNAPE 80 (93)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 98788999988875126888999999999999999987622565665532232100110024545677676889861562
Q ss_pred HCCCEEECCEECC
Q ss_conf 2075685350049
Q gi|254780977|r 83 VEKNFFVVPKAVE 95 (95)
Q Consensus 83 ~~~~yf~VPkViE 95 (95)
T Consensus 81 ~~~g~~~vP~~~~ 93 (93)
T TIGR00135 81 KEDGFIKVPKILE 93 (93)
T ss_pred CCCCCEECCCCCC
T ss_conf 1366130661039