HHsearch alignment of GI: 254780977 and MMDB domain: 3ip4_C_
>3ip4_C (C:) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; multi protein complex, ligase, ATP-binding, nucleotide- binding; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=99.97 E-value=2e-30 Score=186.56 Aligned_cols=94 Identities=28% Similarity=0.382 Sum_probs=92.6
Q ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCH
Q ss_conf 88889999999985277889999999999999999999995235478985211222446677873689999899984083
Q gi|254780977|r 2 LIDVVDVKRIAHFSRISIKEEDIPLFLLRLNNTLSVLEKISEVNVEGVEPMVSVVPMKMVHRPDVVCDGDKVESILSNAP 81 (95)
Q Consensus 2 ~i~~~~i~~la~LarL~l~eee~~~~~~~l~~il~~v~~l~~vdt~~vep~~~~~~~~~~lReD~~~~~~~~e~~l~nap 81 (95)
+|++++|+|||+||||+|+++|+++++++|++|+.|+++|++|||+||+||+|+.+..++||+|++.++.+++.+|+|||
T Consensus 3 ~i~~e~i~~la~LarL~l~eee~~~~~~~l~~il~~~~~L~evdt~~Vep~~~~~~~~~~lReD~~~~~~~~e~il~nap 82 (100)
T 3ip4_C 3 KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAK 82 (100)
T ss_dssp CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHGGGGGSCCTTCCCCSCCSCCCCCCBCSCCCCCCCHHHHHTTCS
T ss_pred CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
T ss_conf 79999999999982789999999999999999999999983477678887643222356787986899989999987286
Q ss_pred HHCCCEEECCEECC
Q ss_conf 32075685350049
Q gi|254780977|r 82 HVEKNFFVVPKAVE 95 (95)
Q Consensus 82 ~~~~~yf~VPkViE 95 (95)
++++|||+||||||
T Consensus 83 ~~~~~yf~VPkVie 96 (100)
T 3ip4_C 83 ETEDGQFKVPTIMN 96 (100)
T ss_dssp SEETTEEEEECC--
T ss_pred CCCCCEEEECCCCC
T ss_conf 31299377061648