HHsearch results for GI: 254780977 and protein with PDBid: 3ip4_C
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; multi protein complex, ligase, ATP-binding, nucleotide- binding; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=99.97 E-value=5.1e-32 Score=194.40 Aligned_cols=95 Identities=28% Similarity=0.396 Sum_probs=93.3
Q ss_pred CC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 98-88899999999852778899999999999999999999952354789852112224466778736899998999840
Q gi|254780977|r 1 ML-IDVVDVKRIAHFSRISIKEEDIPLFLLRLNNTLSVLEKISEVNVEGVEPMVSVVPMKMVHRPDVVCDGDKVESILSN 79 (95)
Q Consensus 1 M~-i~~~~i~~la~LarL~l~eee~~~~~~~l~~il~~v~~l~~vdt~~vep~~~~~~~~~~lReD~~~~~~~~e~~l~n 79 (95)
|+ |++++|+|||+||||+|+++|++.++++|++||+||++|+++||+||+||+|+.+..++||+|++.++.+++++|+|
T Consensus 1 Ms~Is~e~i~~lA~LarL~l~eeE~~~~~~~l~~Il~~~~~L~~vdt~~vep~~~~~~~~~~lReD~~~~~~~~e~~l~n 80 (100)
T 3ip4_C 1 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKN 80 (100)
T ss_dssp --CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHGGGGGSCCTTCCCCSCCSCCCCCCBCSCCCCCCCHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
T ss_conf 99799999999999817899999999999999999999999853565788977443233667989868999899999874
Q ss_pred CHHHCCCEEECCEECC
Q ss_conf 8332075685350049
Q gi|254780977|r 80 APHVEKNFFVVPKAVE 95 (95)
Q Consensus 80 ap~~~~~yf~VPkViE 95 (95)
||++++|||+||||||
T Consensus 81 AP~~~~~~f~VPkVie 96 (100)
T 3ip4_C 81 AKETEDGQFKVPTIMN 96 (100)
T ss_dssp CSSEETTEEEEECC--
T ss_pred CCHHCCCEEEECCCCC
T ss_conf 8540199577162648