HHsearch alignment for GI: 254780978 and conserved domain: PRK00012
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed.
Probab=100.00 E-value=0 Score=920.91 Aligned_cols=481 Identities=56% Similarity=0.919 Sum_probs=450.3
Q ss_pred CCHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHC
Q ss_conf 41345099999999968987899999999999996885558999888999999999999997888988661212232000
Q gi|254780978|r 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCF 82 (493)
Q Consensus 3 ~~~~~s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~~pL~GiPi~vKD~~ 82 (493)
T Consensus 2 ~i~~ls~~~l~~~~~~g~~t~~el~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~~pL~GvPi~vKD~~ 81 (485)
T PRK00012 2 DLTKLTIAELRDALKSKEISAVELTQAYLDRIEAVDPKLNAFLTVTEEQALAQAKAADAKIAAGEALPLAGIPIAIKDNI 81 (485)
T ss_pred CHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
T ss_conf 74355099999999769987999999999999987997778999698999999999999997599989471758788153
Q ss_pred CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 04878553303765157544432104688874000011100000135665322223433566767656655445554445
Q gi|254780978|r 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 (493)
Q Consensus 83 ~v~g~~tt~G~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G 162 (493)
T Consensus 82 ~~~g~~tt~Gs~~~~~~~~~~da~~V~~Lr~aGai~~gktn~~E~~~~~~~~n~~~G~t~NP~~~~-----~~pGGSS~G 156 (485)
T PRK00012 82 CTKGIRTTCASKILENYVPPYDATVVEKLKAAGAVILGKTNMDEFAMGSSTENSAFGPTKNPWDLE-----RVPGGSSGG 156 (485)
T ss_pred CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCHH
T ss_conf 668972060178554699988889999999789989983363121577898899989868975556-----378988529
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 42100123343224321121111305541110115454100011233222212123544322023446653022467431
Q gi|254780978|r 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 (493)
Q Consensus 163 ~a~ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D 242 (493)
T Consensus 157 saaavAag~~~~aiGtDtgGSiRiPAa~cGv~G~KPT~G~is~~G~~p~s~slD~vGpmarsv~D~~~l~~vl~g~d~~D 236 (485)
T PRK00012 157 SAAAVAAGLAPAALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPFARTVEDAALLLDAIAGHDPKD 236 (485)
T ss_pred HHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999829986575447785055659985984332788740588876668885612631418999999988852899888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 01111246531012444322222234344443332014565566566543322110135688721455554444456789
Q gi|254780978|r 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 (493)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~k~lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~~~~~~~~~~~~e~ 322 (493)
T Consensus 237 ~~s~~~~~~~~~~~~~~~~~~lrIgv~~~~~~~~~d~~v~~a~~~a~~~L~~~G~~v~ei~~p~~~~~~~~~~~i~~~E~ 316 (485)
T PRK00012 237 STSLDVPVPDYTAALGKDLKGLKIGVPKEYFGEGLDPEVKEAVEAAIKVLKDLGAEIVEVSLPHTKYALPAYYIIAPAEA 316 (485)
T ss_pred CCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 65567786223555057766767997110025778999999999999999977988999448666779999999999999
Q ss_pred HHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 8887765333103100-243102455432100001466666530233333200012233457899999999999986399
Q gi|254780978|r 323 SSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 (493)
Q Consensus 323 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 401 (493)
T Consensus 317 ~~~la~~dgv~~g~~~~~~~~~~~~~~~~r~~~~~~~v~~ri~~g~~~ls~~~~d~~~~~A~~~R~~l~~~~~~~f~~-~ 395 (485)
T PRK00012 317 SSNLARFDGVRYGYRAEEAKDLEEMYEKTRSEGFGEEVKRRIMLGTYVLSAGYYDAYYLKAQKVRTLIKDDFEKAFEK-V 395 (485)
T ss_pred HHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf 987764002000224566247999999988741289999988503243143446999999999999999999999806-9
Q ss_pred CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 89991799899987763346732578876437899999878983768403559998379999518998799999999999
Q gi|254780978|r 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 (493)
Q Consensus 402 D~lI~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E 481 (493)
T Consensus 396 D~ll~Pt~~~~ap~~~~~~~d--~~~~~~~~~~T~~~Nl~G~PaislP~G~~~~GlPvGlQlig~~~~D~~LL~~A~~~E 473 (485)
T PRK00012 396 DVILGPTAPTTAFKIGEKTDD--PLAMYLSDILTIPANLAGLPAISVPAGFSKDGLPVGLQLIGKPFDEETLLQVAYAFE 473 (485)
T ss_pred CEEEECCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 999969989877886566799--899877668889999969860888676885998876888889999999999999998
Q ss_pred HHHCCC-CCCC
Q ss_conf 992577-9788
Q gi|254780978|r 482 KEAGYF-RPHK 491 (493)
Q Consensus 482 ~~~~~~-~pp~ 491 (493)
T Consensus 474 ~~~~~~~~~P~ 484 (485)
T PRK00012 474 QATGWHKQQPK 484 (485)
T ss_pred HCCCCCCCCCC
T ss_conf 21798889878