HHsearch results for GI: 254780978 and protein with PDBid: 2dc0_A
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=746.56 Aligned_cols=430 Identities=30% Similarity=0.439 Sum_probs=363.1
Q ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCC-CCCCCCCEEHHHHHCCCC
Q ss_conf 5099999999968987899999999999996885558999888999999999999997888-988661212232000048
Q gi|254780978|r 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATK 85 (493)
Q Consensus 7 ~s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~-~~pL~GiPi~vKD~~~v~ 85 (493)
|++.||+++|++|++||+||+++|++||+++|+ +|||+++++|+|+++|+++|+++++|+ .+|||||||+|||+|+||
T Consensus 1 ~d~~e~~~~~~~g~~t~~~~~~~~l~ri~~~~~-~na~~~~~~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD~~~~~ 79 (434)
T 2dc0_A 1 MDLLEAKRLLETGRTTPLALLEEALERAKAFQD-RNALAYLDEEAARKEALALTEELRRGQVRGPLHGLPLTVKDLFPVK 79 (434)
T ss_dssp CCHHHHHHHHHTTSCCHHHHHHHHHHHHHHTGG-GCCEEEECHHHHHHHHHHHHHHHHTTCCCSTTTTCEEEEETTSCBT
T ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
T ss_conf 988999999986999899999999999986099-8889996999999999999999977999898678879988360568
Q ss_pred CCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78553303765157544432104688874000011100000135665322223433566767656655445554445421
Q gi|254780978|r 86 GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 (493)
Q Consensus 86 g~~tt~G~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G~a~ 165 (493)
|++||+|+.++++. +.+||++|++|+++|||++||||||||+++..+.|++||+|+||||+. ++|||||||+|+
T Consensus 80 g~~tt~Gs~~~~~~-~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~~~~~g~~~np~~~~-----~~~gGSSgGsaa 153 (434)
T 2dc0_A 80 GMPTRAGTKAPLPP-LPEEARAVRRLREAGALLFAKTNMHEIALGITGENPWTGPVRNAVDPS-----RQAGGSSGGSAV 153 (434)
T ss_dssp TBCCCTTCSSCCCC-CCSSCHHHHHHHHTTCEEEEEECCSGGGCCSSCCCTTTCCCBCSSCTT-----BBCCSSSHHHHH
T ss_pred CCEECCCCCHHCCC-CCCCCHHHHHHHHCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCHHHH
T ss_conf 94516837400157-997419999999789898476477132157666688989877976665-----557999856899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 00123343224321121111305541110115454100011233222212123544322023446653022467431011
Q gi|254780978|r 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 (493)
Q Consensus 166 ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D~~~ 245 (493)
+||+|++++++|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.+.+..|+..
T Consensus 154 ava~g~~~~aiGtDtgGSiR~PAa~cGl~G~KPT~G~is~~G~~~~~~~~d~~Gpmarsv~D~a~~~~v~~g~~~~~~~~ 233 (434)
T 2dc0_A 154 AVALGIGLASLGTDTGGSIRIPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEGV 233 (434)
T ss_dssp HHHHTSSSCEEEECSSSTTHHHHHHHTCEEEECSTTSSCCTTSCCSCTTTCCEEEEESSHHHHHHHHHHHHTSCCCCCCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHC
T ss_conf 86458863357889887521270640987663589989899977767887836622076888999999972998201111
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 11246531012444322222234344443332014565566566543322110135688721455554444456789888
Q gi|254780978|r 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSN 325 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~k~lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~~~~~~~~~~~~e~~~~ 325 (493)
. +.++++...+.....++++..+++++.+.++..|+++++++++.... ...+..+...+....
T Consensus 234 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 296 (434)
T 2dc0_A 234 Q----------------NPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLPLEGV-YEVYTRLVRYEAARI 296 (434)
T ss_dssp C----------------SCEEEECHHHHTTCSCHHHHHHHHHHHHHTTTTTCEEEECCCCCTTH-HHHHHHHHHHHHHHH
T ss_pred C----------------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHH-HHHHHHHHHHHHHCC
T ss_conf 3----------------66545431112454219999999999999875276302314733678-999999988753111
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 77653331031002431024554321000014666665302333332000122334578999999999999863998999
Q gi|254780978|r 326 LARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 (493)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D~lI 405 (493)
.. .+.......+.++++.++..+.. ....+|.++...|+.+++.+.++|. +||+||
T Consensus 297 ~~------------------~~~~~~~~~~~~~~~~~~~~g~~-----~s~~~~~~a~~~r~~~~~~~~~~f~-~~D~ll 352 (434)
T 2dc0_A 297 HE------------------KALKEHPEGFSPQVREALLAGLA-----LTEKDYRDAVAEREALRLELVKALR-GVDALL 352 (434)
T ss_dssp SH------------------HHHHHCGGGSCHHHHHHHHHHHH-----SCHHHHHHHHHHHHHHHHHHHHHHT-TSSEEE
T ss_pred CC------------------CHHHCCHHHHHHHHHHHHHCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCC-CCCEEE
T ss_conf 11------------------01220755412578888751442-----1004567777777776666653145-778899
Q ss_pred ECCCCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 17998999877633467325---788764378999998789837684035599983799995189987999999999999
Q gi|254780978|r 406 TPTTPTSAFPLGKEENNSGS---MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 (493)
Q Consensus 406 ~Pt~~~~a~~~~~~~~~~~~---~~~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E~ 482 (493)
+||++.+|++++........ ........||.++|++|+|++|||+|+. +|||+||||||++|+|++||++|++||+
T Consensus 353 ~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGlQlig~~~~D~~LL~iA~~lE~ 431 (434)
T 2dc0_A 353 LPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVPTLALPFAKV-EGMPVGLQVVGAYGEDGKVLALGGWLEA 431 (434)
T ss_dssp EESCSSSCCBTTCCEEEETTEEEEHHHHHHTTTHHHHHTTCCEEEEEEEEE-TTEEEEEEEECCTTCHHHHHHHHHHHHT
T ss_pred ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC-CCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 578787887767554454322102578899987999997899399837789-9975758888999999999999999998
Q ss_pred HHC
Q ss_conf 925
Q gi|254780978|r 483 EAG 485 (493)
Q Consensus 483 ~~~ 485 (493)
++|
T Consensus 432 ~lG 434 (434)
T 2dc0_A 432 RLG 434 (434)
T ss_dssp TCC
T ss_pred HHC
T ss_conf 569