BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780978|ref|YP_003065391.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Liberibacter asiaticus str. psy62] (493 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780978|ref|YP_003065391.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Liberibacter asiaticus str. psy62] gi|254040655|gb|ACT57451.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Liberibacter asiaticus str. psy62] Length = 493 Score = 1023 bits (2646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/493 (100%), Positives = 493/493 (100%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD Sbjct: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG Sbjct: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE Sbjct: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV Sbjct: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK Sbjct: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE Sbjct: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII Sbjct: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 Query: 481 EKEAGYFRPHKWW 493 EKEAGYFRPHKWW Sbjct: 481 EKEAGYFRPHKWW 493 >gi|315122520|ref|YP_004063009.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495922|gb|ADR52521.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 492 Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/492 (86%), Positives = 473/492 (96%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS LN M++SESRDRL++KDISAVEL+D++IQAIE+ NS+MNAY+E+VAQKARA A +SD Sbjct: 1 MSALNCMSLSESRDRLKNKDISAVELIDAHIQAIEDYNSKMNAYVEIVAQKARAFAMKSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI +G+ RDLEGIPIG+KDCFATKGIHTQACSHILDGF+P YESTVTQKLWDNGA+MLG Sbjct: 61 ERIASGNLRDLEGIPIGVKDCFATKGIHTQACSHILDGFKPEYESTVTQKLWDNGAIMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV+SPWR+++ST+KFTPGGSSGGSSAAV+GFLCAASIGTDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVVSPWRAVNSTEKFTPGGSSGGSSAAVSGFLCAASIGTDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTGTVG+KPTYGRCSRLGIISFAPSLDQAG+ITR+VRD+AILLKAIAGYD Sbjct: 181 GGSIRQPASFTGTVGMKPTYGRCSRLGIISFAPSLDQAGVITRSVRDAAILLKAIAGYDN 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+TCV+LPVPDYE ++ +SI+G+TVGIPKEYRLD+LSPTI+KTW+QGI+WLKDAGAKIV Sbjct: 241 RDSTCVDLPVPDYELSIGRSIKGITVGIPKEYRLDHLSPTIEKTWKQGIAWLKDAGAKIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHTQYALPAYYII+PAEASSNLARYDGVRYGLRV GKDI++MYE TRS+GFG+E K Sbjct: 301 DISLPHTQYALPAYYIIAPAEASSNLARYDGVRYGLRVAGKDIVDMYEKTRSVGFGKEAK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 HRIMIGTYVLSS C+DSHYLRARKIRTLIKRDFTE F+QGVDVILTPTTPTSAFPLGKEE Sbjct: 361 HRIMIGTYVLSSHCHDSHYLRARKIRTLIKRDFTEVFKQGVDVILTPTTPTSAFPLGKEE 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 NNSGSMGHIYNDVFTVA NMAGLPAISVPAALC++KMPLGLQLIGQPFREE LFSVGQII Sbjct: 421 NNSGSMGHIYNDVFTVATNMAGLPAISVPAALCDRKMPLGLQLIGQPFREEMLFSVGQII 480 Query: 481 EKEAGYFRPHKW 492 EKEAGYFRPHKW Sbjct: 481 EKEAGYFRPHKW 492 >gi|116251836|ref|YP_767674.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium leguminosarum bv. viciae 3841] gi|166217705|sp|Q1MHJ5|GATA_RHIL3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|115256484|emb|CAK07568.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Rhizobium leguminosarum bv. viciae 3841] Length = 493 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/493 (66%), Positives = 399/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R +LR+K+I+A+EL ++YI AI+ +N ++NAYI+V AR A+ SD Sbjct: 1 MSELTSLTIAEARQKLRAKEITAIELTEAYISAIDAANGRLNAYIKVTPDLARVMAKNSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G A +LEGIP+GIKD FAT G+HTQACSHILDGF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIAAGKAGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR+ S + PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRAAGSNQQLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL QS++GM +GIP EYR+D + I+ W+QGI+WLK+AGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGQSLKGMKIGIPNEYRVDGMPDEIETLWRQGIAWLKEAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E Sbjct: 361 RRIMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFELAFDAGVDAILTPATPSSAFGVADEN 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LAADPVKMYLNDIFTVTVNMAGLPGIAVPAGLDHKGLPLGLQLIGKPFDEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|150396167|ref|YP_001326634.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sinorhizobium medicae WSM419] gi|166217713|sp|A6U819|GATA_SINMW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|150027682|gb|ABR59799.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sinorhizobium medicae WSM419] Length = 493 Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/493 (67%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R +L K+I+AVEL D+Y+ AIE +N +NAYI V KAR A+ SD Sbjct: 1 MTDLTSLTIAEARAKLSDKEITAVELTDAYLAAIEAANETINAYIAVTPDKAREMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G A LEGIP+GIKD F T+G+HTQACSHILDGFRPHYESTVTQ LW++GAVMLG Sbjct: 61 ARIGAGKAGALEGIPLGIKDLFGTQGLHTQACSHILDGFRPHYESTVTQNLWNDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ +S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKESNLDLVPGGSSGGSAAAVAARLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+I+FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVIAFASSLDQAGPIARDVRDAAILLKSMASVDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE A+ QSI+GM +GIPKEYR++ + I+ WQQG++WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAAIGQSIKGMRIGIPKEYRVEGMPEEIEALWQQGVAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFGQEVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGQEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF AF GVD ILTP TP+SAF + E+ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFELAFHAGVDAILTPATPSSAFGIADED 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP I+VP L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LASDPVKMYLNDIFTVTVNMAGLPGIAVPGGLDHKGLPLGLQLIGKPFDEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPSKWW 493 >gi|227821665|ref|YP_002825635.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sinorhizobium fredii NGR234] gi|254790400|sp|C3MAA3|GATA_RHISN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|227340664|gb|ACP24882.1| glutamyl-tRNA amidotransferase subunit A [Sinorhizobium fredii NGR234] Length = 493 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/493 (66%), Positives = 399/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R +L +K+I+AVEL D+YI AIE +N +NAY+ V +KARA A+ SD Sbjct: 1 MTDLTRLTIAEARAKLSAKEITAVELTDAYIGAIEAANETINAYVTVTPEKARAMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G A LEGIP+GIKD F T+G+HTQACSHILDGFRP YESTVTQ LW++GAVMLG Sbjct: 61 ARIAAGKAGALEGIPLGIKDLFGTEGVHTQACSHILDGFRPRYESTVTQNLWNDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA +LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNMDLVPGGSSGGSAAAVAAYLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDAAILLKSMASVDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE ++ QSI+GM +GIPKEYR+D + I+ WQQGI+WLK+AGA+IV Sbjct: 241 KDTTSVDLPVPDYEASIGQSIKGMKIGIPKEYRVDGMPEEIEALWQQGIAWLKEAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +I+LPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFG+EVK Sbjct: 301 DITLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGREVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+R+LIKRDF AF+ GVD ILTP TP+SAF + E+ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRSLIKRDFELAFQAGVDAILTPATPSSAFGIADED 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP I+VP L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LASDPVKMYLNDIFTVTVNMAGLPGIAVPGGLDHKGLPLGLQLIGKPFDEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFAPSKWW 493 >gi|209549121|ref|YP_002281038.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium leguminosarum bv. trifolii WSM2304] gi|229486001|sp|B5ZMJ0|GATA_RHILW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|209534877|gb|ACI54812.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 493 Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/493 (66%), Positives = 397/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R +LR+K+I+A+EL ++YI AI+ +N +NAYI+V AR A+ SD Sbjct: 1 MSELTSLTIAEARRKLRAKEITALELTEAYISAIDAANGHLNAYIKVTPDLARLMAKNSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G A DLEGIP+GIKD FAT G+HTQACSHILDGF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIAAGKAGDLEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS+YG VI+PWR+ S + PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSHYGAVINPWRAAGSNQQLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL QS++GM +GIP EYR+D + I+ W+QGI+WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGQSLKGMKIGIPSEYRVDGMPEEIETLWRQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+K+RTLIKRDF AF GVD ILTP TP+SAF + E Sbjct: 361 RRIMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFELAFNAGVDAILTPATPSSAFGVADEN 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP I+VPA L +K +PLGLQLIG+PF EETLF +I Sbjct: 421 LASDPVKMYLNDIFTVTVNMAGLPGIAVPAGLDQKGLPLGLQLIGKPFDEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 481 EQAAGRFTPARWW 493 >gi|86357482|ref|YP_469374.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium etli CFN 42] gi|109891976|sp|Q2K939|GATA_RHIEC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|86281584|gb|ABC90647.1| glutamyl-tRNA amidotransferase subunit A protein [Rhizobium etli CFN 42] Length = 493 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/493 (66%), Positives = 398/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R++LR+K+I+A+EL ++YI AI+ +N ++NAY++V AR A +SD Sbjct: 1 MSELTSLTIAEAREKLRAKEITAIELTEAYISAIDAANERLNAYVKVTPDLARVMARKSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G A +LEGIP+GIKD FAT G+HTQACSHILDGF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIAAGTAGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR+ S + PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRAEGSNQQLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE L QS++GM +GIP EYR+D + I+ W+QGI+WLKDAGA IV Sbjct: 241 KDTTSVDLPVPDYEAVLGQSLKGMKIGIPNEYRVDGMPEEIETLWRQGIAWLKDAGADIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E Sbjct: 361 RRIMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFELAFDAGVDAILTPATPSSAFGVADEN 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L +K +PLGLQLIG+ F EETLF +I Sbjct: 421 LAADPVKMYLNDIFTVTVNMAGLPGIAVPAGLDQKGLPLGLQLIGKAFDEETLFKTAYVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGKFTPAKWW 493 >gi|307317869|ref|ZP_07597307.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sinorhizobium meliloti AK83] gi|306896631|gb|EFN27379.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sinorhizobium meliloti AK83] Length = 500 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/493 (66%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R +L +K+I+AVEL D+Y+ AIE +N +NAY+ V +KAR A+ SD Sbjct: 8 MTDLTSLTIAEARAKLSAKEITAVELTDAYLGAIEAANETINAYVAVTPEKAREMAKASD 67 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G A LEGIP+GIKD F T+GIHTQACSHILDGF P YESTVTQ LW++GAVMLG Sbjct: 68 ARIAAGKAGALEGIPLGIKDLFGTEGIHTQACSHILDGFEPRYESTVTQNLWNDGAVMLG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 128 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNLDLVPGGSSGGSAAAVAARLCAGATATDT 187 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG ITR VRD+AILLK++A D Sbjct: 188 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPITRDVRDAAILLKSMASIDP 247 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE A+ QSI+GM +GIPKEYR+D + I+ WQQGI+WL+DAGA+IV Sbjct: 248 KDTTSVDLPVPDYEAAIGQSIKGMRIGIPKEYRVDGMPEDIEALWQQGIAWLRDAGAEIV 307 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFGQEVK Sbjct: 308 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIIDMYEKTRAAGFGQEVK 367 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E+ Sbjct: 368 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFELAFQAGVDAILTPATPSSAFGIADED 427 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP I+VP L K +PLGLQLIG+PF EETLF +I Sbjct: 428 LASDPVKMYLNDIFTVTVNMAGLPGIAVPGGLDRKGLPLGLQLIGKPFEEETLFKTAHVI 487 Query: 481 EKEAGYFRPHKWW 493 E+ AG F KWW Sbjct: 488 EQAAGRFTASKWW 500 >gi|241204446|ref|YP_002975542.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858336|gb|ACS56003.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 493 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/493 (66%), Positives = 398/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R +LR+K+I+A+EL ++YI AI+ +N ++NAYI+V AR A+ SD Sbjct: 1 MSELTSLTIAEARQKLRAKEITAIELTEAYISAIDAANGRLNAYIKVTPDLARVMAKNSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G A +LEGIP+GIKD FAT G+HTQACSHIL+GF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIAAGKAGELEGIPLGIKDLFATVGVHTQACSHILNGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS+YG VI+PWR+ S + PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSHYGAVINPWRAAGSNQQLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL QS++GM +GIP EYR+D + I+ W+QGI+WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGQSLKGMKIGIPNEYRVDGMPDEIETLWRQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E Sbjct: 361 RRIMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFELAFDAGVDAILTPATPSSAFGVADEN 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LAADPVKMYLNDIFTVTVNMAGLPGIAVPAGLDHKGLPLGLQLIGKPFDEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|260459191|ref|ZP_05807446.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mesorhizobium opportunistum WSM2075] gi|259034745|gb|EEW36001.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mesorhizobium opportunistum WSM2075] Length = 521 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/522 (60%), Positives = 394/522 (75%), Gaps = 30/522 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + +S++R +LR K+I+A E+ D+Y+ AI+ +N +NAY+ V KAR A+ SD Sbjct: 1 MSDLTRLTISQARAKLRGKEITATEITDAYLSAIDRANPALNAYVAVTGDKARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R++ G+ LEGIP+GIKD F T G+HTQACSH+LDGF+P YESTVT LW +GAVMLG Sbjct: 61 ARLVKGEGGALEGIPLGIKDLFGTDGVHTQACSHVLDGFKPRYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPW-----------------------------RSMDST 151 KLNMDEFAMGSSNETSYYGPVI+PW R++D+ Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRRSRLDTVVMPTTHQGDGGFVSAGGTKTQRTLDNA 180 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + PGGSSGGS+ AV+ FLCA + TDTGGSIRQPA+FTGTVGIKPTYGRCSR GI++F Sbjct: 181 -QLVPGGSSGGSATAVSAFLCAGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAF 239 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 A SLDQAG I R VRD+AILLK++A D D T V+ PVPDYE A+ + I+GM VGIPKE Sbjct: 240 ASSLDQAGPIARDVRDAAILLKSMASVDPKDTTSVDRPVPDYEAAIGKPIKGMKVGIPKE 299 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 YR+D + I+ WQ+GI+WL+DAGA+IV+ISLPHT+YALPAYYI++PAEASSNLARYDG Sbjct: 300 YRVDGMPEEIEALWQKGIAWLRDAGAEIVDISLPHTKYALPAYYIVAPAEASSNLARYDG 359 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VRYGLRV GKDI+EMYE TR+ GFG+EVK RIMIGTYVLS+ YD++YL+A+K+R LIKR Sbjct: 360 VRYGLRVPGKDIVEMYEKTRAAGFGREVKRRIMIGTYVLSAGYYDAYYLQAQKVRNLIKR 419 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 DF F G+DVILTP TP++AF + E+ + + ND+FTV VNMAGLP I+VPA Sbjct: 420 DFENVFAAGIDVILTPATPSAAFGIADEDMAADPVKMYLNDIFTVTVNMAGLPGIAVPAG 479 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 L K +PLGLQLIG+PF EETLF +IE+ AG F+P KWW Sbjct: 480 LDPKGLPLGLQLIGRPFEEETLFQTAAVIEQAAGTFQPEKWW 521 >gi|13470863|ref|NP_102432.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mesorhizobium loti MAFF303099] gi|39931624|sp|Q98M95|GATA_RHILO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|14021606|dbj|BAB48218.1| Glu-tRNA(Gln) amidotransferase subunit A [Mesorhizobium loti MAFF303099] Length = 521 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/522 (60%), Positives = 395/522 (75%), Gaps = 30/522 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + +S++R +LR K+I+A E+ ++Y+ AI+ +N +NAY+ V +AR A+ SD Sbjct: 1 MSDLTRLTISQARAKLRGKEITATEITEAYLSAIDRANPALNAYVAVTGDRARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R++ G+ LEGIP+GIKD F T+G+HTQACSH+LDGF+P YESTVT LW +GAVMLG Sbjct: 61 ARLVKGEGGALEGIPLGIKDLFGTEGVHTQACSHVLDGFKPLYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPW-----------------------------RSMDST 151 KLNMDEFAMGSSNETSYYGPVI+PW RS+D+ Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRRSRLDTVVMPTTHQGDGGFVSAGGTKTQRSLDNA 180 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + PGGSSGGS+ AV+ FLCA + TDTGGSIRQPA+FTGTVGIKPTYGRCSR GI++F Sbjct: 181 -QLVPGGSSGGSATAVSAFLCAGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAF 239 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 A SLDQAG I R VRD+AILLK++A D D T V+ PVPDYE A+ + I+GM VGIPKE Sbjct: 240 ASSLDQAGPIARDVRDAAILLKSMASVDPKDTTSVDRPVPDYEAAIGKPIKGMKVGIPKE 299 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 YR+D + I+ WQ+GI+WL+DAGA+IV+ISLPHT+YALPAYYI++PAEASSNLARYDG Sbjct: 300 YRVDGMPEEIEALWQKGIAWLRDAGAEIVDISLPHTKYALPAYYIVAPAEASSNLARYDG 359 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VRYGLRV GKDI+EMYE TR+ GFG+EVK RIMIGTYVLS+ YD++YL+A+K+R LIKR Sbjct: 360 VRYGLRVPGKDIVEMYEKTRAAGFGREVKRRIMIGTYVLSAGYYDAYYLQAQKVRNLIKR 419 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 DF F GVDVILTP TP++AF + E+ + + ND+FTV VNMAGLP I+VPA Sbjct: 420 DFENVFAAGVDVILTPATPSAAFGIADEDMAADPVKMYLNDIFTVTVNMAGLPGIAVPAG 479 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 L K +PLGLQLIG+PF EETLF +IE+ AG F+P KWW Sbjct: 480 LDPKGLPLGLQLIGRPFEEETLFQTAAVIEQAAGTFQPEKWW 521 >gi|240850654|ref|YP_002972054.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Bartonella grahamii as4aup] gi|240267777|gb|ACS51365.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Bartonella grahamii as4aup] Length = 494 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/493 (65%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L K++ A EL ++Y+QAIE++N +NAY+ + A++A A ESD Sbjct: 1 MTDLTTLTIAQARDSLTKKNLKATELTEAYLQAIESANPILNAYVTITAEQAMKMAAESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G LEGIP+GIKD FAT G+HTQACSHILDGF+PHYESTVT LW +GAVMLG Sbjct: 61 SRLARGQGGLLEGIPLGIKDLFATYGVHTQACSHILDGFKPHYESTVTANLWQDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR DS +K PGGSSGGS+AAVA +CA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRKKDSNEKLVPGGSSGGSAAAVAAQICAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG + R VRD AILL+++A +DE Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPVARDVRDCAILLRSMASFDE 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VNLPVPDYE L QSI+GM +GIPKEY +D +SP I + WQ+GISWLK+AG +I Sbjct: 241 KDSTSVNLPVPDYESYLGQSIKGMKIGIPKEYHMDGMSPEIIELWQKGISWLKEAGTEIK 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ISLPHT+YALP+YYII+PAEASSNLARYDGVR+GLRV GKDI+EMYENTRS+GFG EVK Sbjct: 301 NISLPHTKYALPSYYIIAPAEASSNLARYDGVRFGLRVPGKDIIEMYENTRSVGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLSS YD+ YLRA+K+RTL+KRDF + F G+D ILTP T T AF + E+ Sbjct: 361 RRILVGTYVLSSGYYDACYLRAQKVRTLVKRDFDQCFASGIDAILTPATLTPAFGIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVPA L +PLGLQLIG+PF EE +F + II Sbjct: 421 IKNDAVAMYLNDIFTVPVNMAGLPGISVPAGLSSNGLPLGLQLIGKPFAEEVIFQIAHII 480 Query: 481 EKEAGYFRPHKWW 493 EKEAG F KWW Sbjct: 481 EKEAGIFSAEKWW 493 >gi|319783694|ref|YP_004143170.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169582|gb|ADV13120.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 521 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/522 (60%), Positives = 395/522 (75%), Gaps = 30/522 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + +S++R +L K+I+A E+ ++Y+ AI+ +N +NAY+ V KAR A+ SD Sbjct: 1 MSDLTQLTISQARAKLHGKEITATEITEAYLSAIDRANPALNAYVAVTGDKARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R++ G+ LEGIP+GIKD F T+G+HTQACSH+LDGF+P YESTVT LW +GAVMLG Sbjct: 61 ARLVKGEGGALEGIPLGIKDLFGTEGVHTQACSHVLDGFKPRYESTVTSNLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPW-----------------------------RSMDST 151 KLNMDEFAMGSSNETSYYGPVI+PW RS+D+ Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRRSRLDTVVMPTTHQGDGGFVSAGGTRTARSLDNA 180 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + PGGSSGGS+ AV+ FLCA + TDTGGSIRQPA+FTGTVGIKPTYGRCSR GI++F Sbjct: 181 -QLVPGGSSGGSATAVSAFLCAGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAF 239 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 A SLDQAG I R VRD+AILLK++A D D T V++PVPDYE A+ + I+GM VGIP+E Sbjct: 240 ASSLDQAGPIARDVRDAAILLKSMASVDPKDTTSVDMPVPDYEAAIGKPIKGMKVGIPRE 299 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 YR++ + I+ WQ+GI+WLKDAGA+IV+ISLPHT+YALPAYYI++PAEASSNLARYDG Sbjct: 300 YRVEGMPEEIEALWQKGIAWLKDAGAEIVDISLPHTKYALPAYYIVAPAEASSNLARYDG 359 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VRYGLRV GKDI++MYE TR+ GFG+EVK RIMIGTYVLS+ YD++YL+A+K+R LIKR Sbjct: 360 VRYGLRVPGKDIVDMYEKTRAAGFGREVKRRIMIGTYVLSAGYYDAYYLQAQKVRNLIKR 419 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 DF F GVDVILTP TP++AF + E+ + + ND+FTV VNMAGLP I+VPA Sbjct: 420 DFETVFAAGVDVILTPATPSAAFGIADEDMAADPVKMYLNDIFTVTVNMAGLPGIAVPAG 479 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 L K +PLGLQLIG+PF EETLF IIE+ AG F+P KWW Sbjct: 480 LDAKGLPLGLQLIGRPFDEETLFQTAAIIEQAAGTFQPEKWW 521 >gi|222085627|ref|YP_002544157.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] gi|221723075|gb|ACM26231.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] Length = 490 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/490 (66%), Positives = 392/490 (80%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + ++E+RD+LR+KDI+A EL ++Y+ I+ N Q+NAYI+V +KAR A+ SD R+ Sbjct: 1 MTSLTIAEARDKLRAKDITATELTEAYLSTIDAVNDQLNAYIKVTPEKARDMAKASDARL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G A LEGIP+GIKD F T+GIHTQACSHILDGF P YESTVTQ LW++GAVMLGKLN Sbjct: 61 AAGKAGALEGIPLGIKDLFGTEGIHTQACSHILDGFEPRYESTVTQNLWNDGAVMLGKLN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE+SYYGPVI+PWR+ S + PGGSSGGS+AAVA LCA + TDTGGS Sbjct: 121 MDEFAMGSSNESSYYGPVINPWRANGSNQQLVPGGSSGGSAAAVAAHLCAGATATDTGGS 180 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I R VRD+AILLK++A D D Sbjct: 181 IRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARDVRDAAILLKSMASIDAKDT 240 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V+LPVPDYE +L QS++GM +GIP EYR+D + I+ WQQGI+WLKDAGA+IV IS Sbjct: 241 TSVDLPVPDYEASLGQSLKGMKIGIPNEYRVDGMPDEIETLWQQGIAWLKDAGAEIVNIS 300 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+G++I +MYE TR+ GFG EVK RI Sbjct: 301 LPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGENIADMYEKTRAAGFGNEVKRRI 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 MIGTYVLS+ YD++YLRA+K+RTLIKRDF AF GVD ILTP TP+SAF + E+ S Sbjct: 361 MIGTYVLSAGYYDAYYLRAQKVRTLIKRDFELAFHAGVDAILTPATPSSAFGIADEDLAS 420 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+FTV VNMAGLP I+VPA L K +PLGLQ+IG+PF EETLF +IE+ Sbjct: 421 DPVKMYLNDIFTVTVNMAGLPGIAVPAGLDSKGLPLGLQVIGKPFDEETLFKTAHVIEQA 480 Query: 484 AGYFRPHKWW 493 AG F P KWW Sbjct: 481 AGKFTPTKWW 490 >gi|159184709|ref|NP_354325.2| aspartyl/glutamyl-tRNA amidotransferase subunit A [Agrobacterium tumefaciens str. C58] gi|166214940|sp|Q8UFS8|GATA_AGRT5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|159139997|gb|AAK87110.2| glutamyl-tRNA amidotransferase subunit A [Agrobacterium tumefaciens str. C58] Length = 493 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/493 (63%), Positives = 398/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R++L++KD SA+EL D+Y+ AI+ +N +NAY+ + +KAR A+ SD Sbjct: 1 MTDLTSLTIAEAREKLKAKDFSALELTDAYLSAIDAANGALNAYVALTPEKARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI +G A +LEG+P+G+KD FAT+ +HTQACSH+LDGF+P YESTVTQ LWD GAVMLG Sbjct: 61 ERIASGSAGELEGVPLGVKDLFATRDVHTQACSHVLDGFKPKYESTVTQNLWDQGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNE+S+YGPVI+PWR+ S K PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNESSWYGPVINPWRANGSEQKLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI+++A SLDQAG I R VRD+AILLK +A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRFGIVAYASSLDQAGPIARDVRDAAILLKTMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE+A+ QS++G+ +GIP+EYR+D + I+K W +G+ WL+DAGA++V Sbjct: 241 KDTTSVDLPVPDYEKAIGQSLKGLKIGIPREYRVDGMPEEIEKLWAKGVEWLRDAGAEVV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI +MYE +R+ GFG+EV+ Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIADMYEKSRAAGFGKEVQ 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++YL+A+K+RTLIKRDF F +GVD IL P TP+SAF +G EE Sbjct: 361 RRIMVGTYVLSAGYYDAYYLKAQKVRTLIKRDFENVFHEGVDAILAPITPSSAFAVGDEE 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + DVFT+ VNMAGLP +SVPA L K +PLGLQLIG+PF EETLF I Sbjct: 421 LASDPVKMYLQDVFTITVNMAGLPGLSVPAGLDGKGLPLGLQLIGKPFEEETLFKTAHAI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGKFTPAKWW 493 >gi|163868301|ref|YP_001609510.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bartonella tribocorum CIP 105476] gi|189045240|sp|A9IU58|GATA_BART1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|161017957|emb|CAK01515.1| glutamyl-tRNA amidotransferase subunit A [Bartonella tribocorum CIP 105476] Length = 494 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/493 (65%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L +K + A EL ++Y++AIE +N +NAY+ + A++AR A ESD Sbjct: 1 MTDLTTLTIAQARDALITKKLKATELTEAYLKAIELANPTLNAYVTITAEQARKMAAESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R+ G+ LEGIP+GIKD FAT G+HTQACS+ILDGF+P+YEST+T LW +GAVMLG Sbjct: 61 RRLAKGERGLLEGIPLGIKDLFATHGVHTQACSNILDGFKPNYESTITANLWQDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVISPWR DS +K PGGSSGGS+AAVA +CA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVISPWRKKDSNEKLVPGGSSGGSAAAVAAQICAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I R VRD AILL+++A +DE Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDCAILLRSMASFDE 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VNLPVPDYE L +SI+GM +GIPKEY L +S I WQ+GI+WLK+AGA+I Sbjct: 241 KDSTSVNLPVPDYESYLGKSIKGMKIGIPKEYYLAGMSQEIIDLWQKGINWLKEAGAEIR 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALP+YYII+PAEASSNLARYDGVR+GLRV GKDI+EMYENTRS+GFG EVK Sbjct: 301 DISLPHTKYALPSYYIIAPAEASSNLARYDGVRFGLRVPGKDIIEMYENTRSVGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLSS YD+ YLRA+K+RTL+KRDF + F+ GVD ILTP TPT AF + E+ Sbjct: 361 RRILIGTYVLSSGYYDAGYLRAQKVRTLVKRDFDQCFDSGVDAILTPATPTPAFGIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVPA L +PLGLQLIG+PF EE +F + II Sbjct: 421 IKNDAVAMYLNDIFTVPVNMAGLPGISVPAGLSSNGLPLGLQLIGKPFAEEVIFQIAHII 480 Query: 481 EKEAGYFRPHKWW 493 E+EAG F KWW Sbjct: 481 EQEAGIFCAKKWW 493 >gi|307301136|ref|ZP_07580905.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sinorhizobium meliloti BL225C] gi|306904091|gb|EFN34677.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sinorhizobium meliloti BL225C] Length = 500 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/493 (66%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R +L +K+I+AVEL D+Y+ AIE +N +NAY+ V +KAR A+ SD Sbjct: 8 MTDLTSLTIAEARAKLSAKEITAVELTDAYLGAIEAANETINAYVAVTPEKAREMAKASD 67 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+A LEGIP+GIKD F T+GIHTQACSHILDGF P YESTVTQ LW++GAVMLG Sbjct: 68 ARIAAGNAAALEGIPLGIKDLFGTEGIHTQACSHILDGFEPRYESTVTQNLWNDGAVMLG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 128 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNLDLVPGGSSGGSAAAVAARLCAGATATDT 187 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I R VRD+AILLK++A D Sbjct: 188 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDAAILLKSMASIDP 247 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE A+ QSI+GM +GIPKEYR+D + I+ WQQGI+WL+DAGA+IV Sbjct: 248 KDTTSVDLPVPDYEAAIGQSIKGMRIGIPKEYRVDGMPEDIEALWQQGIAWLRDAGAEIV 307 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFGQEVK Sbjct: 308 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIIDMYEKTRAAGFGQEVK 367 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E+ Sbjct: 368 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFELAFQAGVDAILTPATPSSAFGIADED 427 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP I+VP L K +PLGLQLIG+PF EETLF +I Sbjct: 428 LASDPVKMYLNDIFTVTVNMAGLPGIAVPGGLDRKGLPLGLQLIGKPFEEETLFKTAHVI 487 Query: 481 EKEAGYFRPHKWW 493 E+ AG F KWW Sbjct: 488 EQAAGRFTASKWW 500 >gi|15965065|ref|NP_385418.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sinorhizobium meliloti 1021] gi|39931619|sp|Q92QK7|GATA_RHIME RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|15074244|emb|CAC45891.1| Putative glutamyl-tRNA amidotransferase subunit A [Sinorhizobium meliloti 1021] Length = 493 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/493 (66%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R +L +K+I+AVEL D+Y+ AIE +N +NAY+ V +KAR A+ SD Sbjct: 1 MTDLTSLTIAEARAKLSAKEITAVELTDAYLGAIEAANETINAYVAVTPEKAREMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+A LEGIP+GIKD F T+GIHTQACSHILDGF P YESTVTQ LW++GAVMLG Sbjct: 61 ARIAAGNAAALEGIPLGIKDLFGTEGIHTQACSHILDGFEPRYESTVTQNLWNDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNLDLVPGGSSGGSAAAVAARLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDAAILLKSMASIDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE A+ QSI+GM +GIPKEYR+D + I+ WQQGI+WL+DAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAAIGQSIKGMRIGIPKEYRVDGMPEDIEALWQQGIAWLRDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFGQEVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIIDMYEKTRAAGFGQEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E+ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFELAFQAGVDAILTPATPSSAFGIADED 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP I+VP L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LASDPVKMYLNDIFTVTVNMAGLPGIAVPGGLDRKGLPLGLQLIGKPFEEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F KWW Sbjct: 481 EQAAGRFTASKWW 493 >gi|163759348|ref|ZP_02166434.1| glutamyl-tRNA amidotransferase subunit A [Hoeflea phototrophica DFL-43] gi|162283752|gb|EDQ34037.1| glutamyl-tRNA amidotransferase subunit A [Hoeflea phototrophica DFL-43] Length = 493 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/493 (65%), Positives = 386/493 (78%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++E+RD + +S+ +L D+Y+ AIE +N +NAY+ V KAR A+ SD Sbjct: 1 MSDLTRLTIAEARDEMNKGALSSADLTDAYLAAIEAANKALNAYVTVTGDKARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G LEGIP+GIKD F T+G HTQACSH+LDGF+P YESTVT LW +GAVMLG Sbjct: 61 ARRAAGTVGALEGIPLGIKDLFGTEGEHTQACSHVLDGFKPRYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR+ S PGGSSGGS+AAV+ LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRAEGSNSDLVPGGSSGGSAAAVSAMLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I R VRD+AILLK++A D+ Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDAAILLKSMASVDD 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL S++G+ +GIP+EYR+D + ID WQQGI+WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGGSVRGLKIGIPREYRMDGMPAEIDALWQQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +I LPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFGQEVK Sbjct: 301 DIELPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEKTRAEGFGQEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF AF GVD ILTP TP+SAF +G EE Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFELAFNAGVDAILTPATPSSAFAIGDEE 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + NDVFTV VNMAGLP I+VPA L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LAADPVKMYLNDVFTVTVNMAGLPGIAVPAGLDPKGLPLGLQLIGRPFEEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 481 EQAAGRFEPKRWW 493 >gi|118588858|ref|ZP_01546266.1| glutamyl-tRNA amidotransferase subunit A [Stappia aggregata IAM 12614] gi|118438844|gb|EAV45477.1| glutamyl-tRNA amidotransferase subunit A [Stappia aggregata IAM 12614] Length = 494 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/493 (64%), Positives = 395/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R+ L++KD +++EL D++I+ IE +N ++NAY+ V A KAR A+ SD Sbjct: 1 MTDLTKLTIAEAREGLKNKDYTSLELTDAFIRNIETANEKLNAYVTVTADKARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ LEGIP+GIKD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 AKLAKGEGGALEGIPLGIKDLFATKGVHTQACSHILDGFKPAYESTVTSNLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR S PGGSSGGS+AAVA +C + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRKKGSNQDLVPGGSSGGSAAAVAARMCMGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I TVRDSAI+LK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAHTVRDSAIMLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE A+ +S++G+ +GIP EYRL+ + I+ WQ+GI WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAAIGKSVKGLKIGIPAEYRLEGMPADIEALWQKGIDWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +I++PHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI+EMYENTR+ GFG+EVK Sbjct: 301 DIAMPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIVEMYENTRAAGFGEEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+K+RTLIKRDF A+E GVD ILTP TP++AF + ++ Sbjct: 361 RRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDLAWENGVDTILTPATPSAAFGVADQD 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +S + ND+FTV VNMAGLP ISVPA L +PLGLQLIG+PF E TLF VGQ+I Sbjct: 421 LHSDPVKMYLNDIFTVTVNMAGLPGISVPAGLDNNGLPLGLQLIGKPFDESTLFQVGQVI 480 Query: 481 EKEAGYFRPHKWW 493 E AG F P WW Sbjct: 481 EDAAGSFAPEAWW 493 >gi|254720420|ref|ZP_05182231.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella sp. 83/13] gi|265985438|ref|ZP_06098173.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella sp. 83/13] gi|306839003|ref|ZP_07471824.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella sp. NF 2653] gi|264664030|gb|EEZ34291.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella sp. 83/13] gi|306405909|gb|EFM62167.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella sp. NF 2653] Length = 493 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 395/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVTVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSMKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E+ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADED 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|17989020|ref|NP_541653.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis bv. 1 str. 16M] gi|17984859|gb|AAL53917.1| glutamyl-tRNA(gln) amidotransferase subunit a [Brucella melitensis bv. 1 str. 16M] Length = 495 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 3 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 62 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 63 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 123 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 183 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 243 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 302 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 303 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 362 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 363 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFSLADEV 422 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 423 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 482 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 483 EQAAGRFTPAKWW 495 >gi|190891545|ref|YP_001978087.1| glutamyl-tRNA amidotransferase, A subunit [Rhizobium etli CIAT 652] gi|190696824|gb|ACE90909.1| glutamyl-tRNA amidotransferase protein, A subunit [Rhizobium etli CIAT 652] Length = 493 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/493 (66%), Positives = 398/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R +LR+K+I+A+EL D+YI AI+ +N ++NAY++V AR A +SD Sbjct: 1 MSELTSLTIAEARRKLRAKEITAIELTDAYIAAIDAANERLNAYVKVTPDLARVMARKSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G + +LEGIP+GIKD FAT G+HTQACSHILDGF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIAAGTSGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR+ S + PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRAEGSNQQLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL QS++GM +GIP EYR+D + I+ W+QGI+WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGQSLKGMKIGIPNEYRVDGMPEEIESLWRQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI++MYE TR+ GFGQEVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIVDMYEKTRAAGFGQEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+K+RTLIKRDF AF+ GVD ILTP TP+SAF + E Sbjct: 361 RRIMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFELAFDAGVDAILTPATPSSAFGVADEN 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L K +PLGLQLIG+ F EETLF +I Sbjct: 421 LAADPVKMYLNDIFTVTVNMAGLPGIAVPAGLDHKGLPLGLQLIGKAFDEETLFKTAYVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGKFTPAKWW 493 >gi|49475589|ref|YP_033630.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bartonella henselae str. Houston-1] gi|81647906|sp|Q6G3E9|GATA_BARHE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|49238396|emb|CAF27623.1| Glutamyl-tRNA (gln) amidotransferase subunit A [Bartonella henselae str. Houston-1] Length = 494 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/493 (64%), Positives = 392/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L+ +++ A EL ++Y++AIE +N +N Y+ + A++A A +SD Sbjct: 1 MTDLTTLTIAQARDALKKRELKATELTEAYLKAIELANPILNTYVAITAEQAMKMAAKSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G LEGIP+GIKD FAT+ +HTQACS+ILDGF+PHYESTVT LW +GAVMLG Sbjct: 61 SRLAKGHGGILEGIPLGIKDLFATQDVHTQACSYILDGFKPHYESTVTANLWRDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVISPWR DS +K PGGSSGGS+AAVA LC + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVISPWRKKDSNEKLVPGGSSGGSAAAVAAGLCVGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G I+FA SLDQAG I R VRD AILLK++A +DE Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTIAFASSLDQAGPIGRNVRDCAILLKSMASFDE 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VNLPVPDYE + QSI+GM +GIPKEY L+ +SP I + WQ+GI+WLK+AGA+I Sbjct: 241 KDSTSVNLPVPDYESYIGQSIKGMKIGIPKEYYLEGMSPEIVELWQKGINWLKEAGAEIK 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ISLPHT+YALPAYYI++PAEASSNLARYDGVR+GLR+ GKD++EMYENTRS+GFG EVK Sbjct: 301 NISLPHTKYALPAYYIVAPAEASSNLARYDGVRFGLRIPGKDVIEMYENTRSVGFGNEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLSS YD++YL+A+K+RTL+KRDF + F GVD ILTP TPT AF + E+ Sbjct: 361 RRILIGTYVLSSGYYDAYYLKAQKVRTLVKRDFDQCFSSGVDAILTPATPTPAFGIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVP+ L +PLGLQLIG+PF EE +F + II Sbjct: 421 IKNDTVAMYLNDIFTVPVNMAGLPGISVPSGLSSNGLPLGLQLIGKPFAEEVIFQIAHII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F KWW Sbjct: 481 EQAAGMFSAEKWW 493 >gi|326554043|gb|ADZ88682.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis M5-90] Length = 495 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 3 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 62 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 63 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 123 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 183 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 243 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 302 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 303 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 362 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 363 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFSLADEV 422 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 423 LANDPVKMYLNDIFTVIVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 482 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 483 EQAAGRFTPAKWW 495 >gi|256043491|ref|ZP_05446418.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis bv. 1 str. Rev.1] gi|256111490|ref|ZP_05452504.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis bv. 3 str. Ether] gi|260564686|ref|ZP_05835171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 1 str. 16M] gi|265989909|ref|ZP_06102466.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 1 str. Rev.1] gi|265992986|ref|ZP_06105543.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 3 str. Ether] gi|39931612|sp|Q8YC57|GATA_BRUME RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|260152329|gb|EEW87422.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 1 str. 16M] gi|262763856|gb|EEZ09888.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 3 str. Ether] gi|263000578|gb|EEZ13268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 1 str. Rev.1] Length = 493 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFSLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|110633718|ref|YP_673926.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mesorhizobium sp. BNC1] gi|122966039|sp|Q11IL4|GATA_MESSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|110284702|gb|ABG62761.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chelativorans sp. BNC1] Length = 493 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/493 (63%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +SE R +L K+ +A+EL ++Y+ AI+ +N ++NAYI V A KAR A+ SD Sbjct: 1 MTELTKLTISEIRAKLADKEFTALELTEAYLSAIQTANEKLNAYITVTADKAREMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R++ G AR LEG+P+GIKD FAT+G+HTQACSHILD F+P YESTVT LW +GAVMLG Sbjct: 61 MRLMQGGARPLEGVPLGIKDLFATEGVHTQACSHILDAFKPRYESTVTTNLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV++PWR PGGSSGGS+AAVA +LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVVNPWREEGGNKDLVPGGSSGGSAAAVAAWLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FT TVGIKPTYGRCSR GI++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTATVGIKPTYGRCSRWGIVAFASSLDQAGPIARDVRDAAILLKSMASVDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T +++PVPDYE A+ QS++G+ +GIPKEYR++ + I+ W +GI W++DAGA+IV Sbjct: 241 KDTTSIDIPVPDYEAAIGQSVKGLKIGIPKEYRVEGMPAEIEALWHKGIEWMRDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV G+DI EMYEN+R+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGRDITEMYENSRAAGFGREVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+++RTLIKRDF +AFE GVD ILTP TP++AF + +E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQRVRTLIKRDFEQAFEAGVDAILTPATPSAAFGIADQE 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+ + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+ F EETLF II Sbjct: 421 MNADPVKMYLNDIFTVTVNMAGLPGIAVPAGLDSRGLPLGLQLIGRAFDEETLFRTAHII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 481 EQAAGKFEPKRWW 493 >gi|256015371|ref|YP_003105380.1| glutamyl-tRNA amidotransferase subunit A [Brucella microti CCM 4915] gi|255998031|gb|ACU49718.1| glutamyl-tRNA amidotransferase subunit A [Brucella microti CCM 4915] Length = 493 Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEADALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|161620656|ref|YP_001594542.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella canis ATCC 23365] gi|225629087|ref|ZP_03787120.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brucella ceti str. Cudo] gi|254699830|ref|ZP_05161658.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella suis bv. 5 str. 513] gi|254702968|ref|ZP_05164796.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella suis bv. 3 str. 686] gi|254705911|ref|ZP_05167739.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella pinnipedialis M163/99/10] gi|254711138|ref|ZP_05172949.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella pinnipedialis B2/94] gi|254712404|ref|ZP_05174215.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella ceti M644/93/1] gi|254715476|ref|ZP_05177287.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella ceti M13/05/1] gi|256029519|ref|ZP_05443133.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella pinnipedialis M292/94/1] gi|260167391|ref|ZP_05754202.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella sp. F5/99] gi|260568118|ref|ZP_05838587.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella suis bv. 4 str. 40] gi|261217211|ref|ZP_05931492.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti M13/05/1] gi|261313339|ref|ZP_05952536.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella pinnipedialis M163/99/10] gi|261318728|ref|ZP_05957925.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella pinnipedialis B2/94] gi|261320082|ref|ZP_05959279.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti M644/93/1] gi|261750304|ref|ZP_05994013.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella suis bv. 5 str. 513] gi|261753577|ref|ZP_05997286.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella suis bv. 3 str. 686] gi|261756801|ref|ZP_06000510.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella sp. F5/99] gi|265986526|ref|ZP_06099083.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella pinnipedialis M292/94/1] gi|189045241|sp|A9MBN4|GATA_BRUC2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|161337467|gb|ABX63771.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella canis ATCC 23365] gi|225615583|gb|EEH12632.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brucella ceti str. Cudo] gi|260154783|gb|EEW89864.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella suis bv. 4 str. 40] gi|260922300|gb|EEX88868.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti M13/05/1] gi|261292772|gb|EEX96268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti M644/93/1] gi|261297951|gb|EEY01448.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella pinnipedialis B2/94] gi|261302365|gb|EEY05862.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella pinnipedialis M163/99/10] gi|261736785|gb|EEY24781.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella sp. F5/99] gi|261740057|gb|EEY27983.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella suis bv. 5 str. 513] gi|261743330|gb|EEY31256.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella suis bv. 3 str. 686] gi|264658723|gb|EEZ28984.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella pinnipedialis M292/94/1] Length = 493 Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|225686380|ref|YP_002734352.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis ATCC 23457] gi|256262480|ref|ZP_05465012.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 2 str. 63/9] gi|254790382|sp|C0RLB5|GATA_BRUMB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225642485|gb|ACO02398.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brucella melitensis ATCC 23457] gi|263092215|gb|EEZ16512.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella melitensis bv. 2 str. 63/9] gi|326410751|gb|ADZ67815.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis M28] Length = 493 Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFSLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVIVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|163844746|ref|YP_001622401.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella suis ATCC 23445] gi|189045242|sp|A9WYR3|GATA_BRUSI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|163675469|gb|ABY39579.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella suis ATCC 23445] Length = 493 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K+ A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSTASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|148558188|ref|YP_001257581.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella ovis ATCC 25840] gi|166217647|sp|A5VUS6|GATA_BRUO2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148369473|gb|ABQ62345.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brucella ovis ATCC 25840] Length = 493 Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+E K Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEAK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|23500338|ref|NP_699778.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella suis 1330] gi|39931585|sp|Q8FW67|GATA_BRUSU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|23463953|gb|AAN33783.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brucella suis 1330] Length = 493 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VP L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPGGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|256157714|ref|ZP_05455632.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella ceti M490/95/1] gi|256253315|ref|ZP_05458851.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella ceti B1/94] gi|261220431|ref|ZP_05934712.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti B1/94] gi|265996218|ref|ZP_06108775.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti M490/95/1] gi|260919015|gb|EEX85668.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti B1/94] gi|262550515|gb|EEZ06676.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella ceti M490/95/1] Length = 493 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R V D+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVHDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|62317549|ref|YP_223402.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus bv. 1 str. 9-941] gi|83269530|ref|YP_418821.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella melitensis biovar Abortus 2308] gi|189022804|ref|YP_001932545.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus S19] gi|237817097|ref|ZP_04596089.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella abortus str. 2308 A] gi|254691047|ref|ZP_05154301.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus bv. 6 str. 870] gi|254695647|ref|ZP_05157475.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus bv. 3 str. Tulya] gi|254698831|ref|ZP_05160659.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus bv. 2 str. 86/8/59] gi|254732278|ref|ZP_05190856.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus bv. 4 str. 292] gi|256256232|ref|ZP_05461768.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus bv. 9 str. C68] gi|260544785|ref|ZP_05820606.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus NCTC 8038] gi|260756642|ref|ZP_05868990.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 6 str. 870] gi|260760072|ref|ZP_05872420.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 4 str. 292] gi|260763311|ref|ZP_05875643.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 2 str. 86/8/59] gi|260882459|ref|ZP_05894073.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 9 str. C68] gi|261216047|ref|ZP_05930328.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 3 str. Tulya] gi|297249588|ref|ZP_06933289.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 5 str. B3196] gi|75495582|sp|Q577Z3|GATA_BRUAB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109829636|sp|Q2YKL3|GATA_BRUA2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485755|sp|B2SB62|GATA_BRUA1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|62197742|gb|AAX76041.1| GatA, glutamyl-tRNA(Gln) amidotransferase, A subunit [Brucella abortus bv. 1 str. 9-941] gi|82939804|emb|CAJ12812.1| Amidase:Glutamyl-tRNA(Gln) amidotransferase A subunit [Brucella melitensis biovar Abortus 2308] gi|189021378|gb|ACD74099.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Brucella abortus S19] gi|237787910|gb|EEP62126.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella abortus str. 2308 A] gi|260098056|gb|EEW81930.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella abortus NCTC 8038] gi|260670390|gb|EEX57330.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 4 str. 292] gi|260673732|gb|EEX60553.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 2 str. 86/8/59] gi|260676750|gb|EEX63571.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 6 str. 870] gi|260871987|gb|EEX79056.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 9 str. C68] gi|260917654|gb|EEX84515.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 3 str. Tulya] gi|297173457|gb|EFH32821.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus bv. 5 str. B3196] Length = 493 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDE AMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEVAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|256059214|ref|ZP_05449420.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella neotomae 5K33] gi|261323162|ref|ZP_05962359.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella neotomae 5K33] gi|261299142|gb|EEY02639.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella neotomae 5K33] Length = 493 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+L VPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLQVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|114707197|ref|ZP_01440095.1| glutamyl-tRNA amidotransferase subunit A [Fulvimarina pelagi HTCC2506] gi|114537393|gb|EAU40519.1| glutamyl-tRNA amidotransferase subunit A [Fulvimarina pelagi HTCC2506] Length = 493 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/493 (64%), Positives = 393/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD+L K+IS++EL D+Y+ AI+++N +NAY+ V KARA A+ SD Sbjct: 1 MTDLTGLTIAEARDKLTKKEISSIELTDAYLGAIDHANGTLNAYVAVTPDKARAMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+A LEGIP+GIKD F+T+G+HTQA SHILDGF P YESTVT LW +GAVMLG Sbjct: 61 EKIGKGEAGALEGIPLGIKDLFSTEGVHTQAASHILDGFEPRYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRKAGSNADMVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVGIKPTYGRCSR GI++FA SLDQAG I R VRDSAILLK++A D Sbjct: 181 GGSIRQPAALTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARDVRDSAILLKSMASSDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE A+ +S++G+ +GIPKEYR+D + I+ WQQGI+WLKDAGA+IV Sbjct: 241 KDTTSVDREVPDYEAAVGRSVRGLKIGIPKEYRMDGMPEEIETLWQQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++SLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV G +I EMYENTR+ GFG+EVK Sbjct: 301 DVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGGNIAEMYENTRAAGFGREVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YL+A+K+RTLIKRDF + GVD +LTP TP++AF +G ++ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLQAQKVRTLIKRDFETVYADGVDALLTPATPSAAFGIGDQD 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L +PLGLQLIG+PF EETLF+ G +I Sbjct: 421 MAADPVKMYLNDIFTVTVNMAGLPGIAVPAGLSAAGLPLGLQLIGRPFDEETLFAAGAVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG FRP KWW Sbjct: 481 EQAAGRFRPDKWW 493 >gi|239833960|ref|ZP_04682288.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Ochrobactrum intermedium LMG 3301] gi|239822023|gb|EEQ93592.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Ochrobactrum intermedium LMG 3301] Length = 495 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/493 (64%), Positives = 394/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+++N +NAY++V +AR+ A+ SD Sbjct: 3 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDSANDTINAYVKVTHDQARSMAKASD 62 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 63 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWSDGAVMLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYG V +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 123 KLNMDEFAMGSSNETSYYGAVKNPWRAKGSNADLVPGGSSGGSAAAVAAQLCAGATATDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 183 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASLDL 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIPKEYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 243 KDTTSVDLPVPDYEAALGKSLKGMKIGIPKEYRVDGMPGEIEELWQKGIQYLKDAGAEIV 302 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YAL AYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 303 DISLPHTKYALAAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 362 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF +AF +GV ILTP TP++AF L E+ Sbjct: 363 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDAFAKGVHAILTPATPSAAFGLADED 422 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + + +PLGLQLIG+PF EETLF I Sbjct: 423 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGVNDHGLPLGLQLIGRPFEEETLFQAAHAI 482 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 483 EQAAGRFTPAKWW 495 >gi|90417718|ref|ZP_01225630.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Aurantimonas manganoxydans SI85-9A1] gi|90337390|gb|EAS51041.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Aurantimonas manganoxydans SI85-9A1] Length = 493 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/493 (64%), Positives = 389/493 (78%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + ++E+RD+L +K+ SA EL +Y AIE +N Q+NAY+ V KA A A+ SD Sbjct: 1 MTELTSLTIAEARDKLVAKEFSATELTQAYNAAIEAANPQINAYVAVTPDKALAMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R+ G+A LEGIP+GIKD FAT+G+HTQA SHILDGF P YESTVT LW +GAVMLG Sbjct: 61 ERLAKGEAGALEGIPMGIKDLFATEGVHTQAASHILDGFEPRYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR S PGGSSGGS+AAV+ LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRRKGSNADLVPGGSSGGSAAAVSAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAALTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE A+ +S++G+ +GIPKEYR+D + I+ WQQGI+WL+DAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAAVGRSVKGLRIGIPKEYRVDNMPEEIEALWQQGIAWLRDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++SLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKD+ EMYENTR+ GFG+EVK Sbjct: 301 DVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDVAEMYENTRAAGFGREVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF + G+D +LTP TP++AF + ++ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFETVYADGIDALLTPATPSAAFGIADQD 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + ND+FTV VNMAGLP ++VPA L +PLGLQLIG+PF EETLF++G I Sbjct: 421 MASDPVKMYLNDIFTVTVNMAGLPGLAVPAGLSGDGLPLGLQLIGRPFEEETLFAIGSAI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFEPAKWW 493 >gi|307946453|ref|ZP_07661788.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp. TrichSKD4] gi|307770117|gb|EFO29343.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp. TrichSKD4] Length = 494 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/493 (64%), Positives = 395/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++E+R+ L++K+ +AVEL D++++ IE N ++NAY+ V KAR A+ SD Sbjct: 1 MTDLTNKTIAEAREGLKNKEFTAVELTDAFLKNIEAGNEKLNAYVAVTGDKAREMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R+ G+A LEGIP+GIKD FAT+G+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERLAKGEAGTLEGIPLGIKDLFATEGVHTQACSHILDGFKPKYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYG VI+PWR S PGGSSGGS++AVAG LC + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGDVINPWRKNGSNQDLVPGGSSGGSASAVAGRLCMGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I +TVRDSAILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIAQTVRDSAILLKSMASVDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVP+YE AL +S++G+ +GIP EYRLD + I++ WQ+GI WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPNYEDALGKSVKGLKIGIPAEYRLDGMPAEIEELWQKGIQWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +I+LPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI+EMYENTR+ GFG EVK Sbjct: 301 DINLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIVEMYENTRAEGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++IGTYVLS+ YD++YL+A+K+RTLIKRDF A+E GVD ILTP TP++AF + ++ Sbjct: 361 RRVLIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDLAWENGVDAILTPATPSAAFGVADQD 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + ND+FTV VNMAGLP ISVPA L + +PLGLQLIG+PF E TLF VGQ+I Sbjct: 421 LHADPVKMYLNDIFTVTVNMAGLPGISVPAGLDKDGLPLGLQLIGKPFDEATLFQVGQVI 480 Query: 481 EKEAGYFRPHKWW 493 E AG F KWW Sbjct: 481 EDAAGTFTAEKWW 493 >gi|294853609|ref|ZP_06794281.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella sp. NVSL 07-0026] gi|294819264|gb|EFG36264.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella sp. NVSL 07-0026] Length = 493 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/493 (64%), Positives = 391/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N +NAY+ V +A + A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQACSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNL RYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLTRYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEV 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LADDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|153010981|ref|YP_001372195.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ochrobactrum anthropi ATCC 49188] gi|166217692|sp|A6X562|GATA_OCHA4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|151562869|gb|ABS16366.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ochrobactrum anthropi ATCC 49188] Length = 493 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/493 (64%), Positives = 395/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+++N +NAY++V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDSANETINAYVKVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYG V +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGSVKNPWRANGSNADLVPGGSSGGSAAAVAAQLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LP+PDYE A+ +S++GM +GIPKEYR+D + I++ WQ+GI +LKDAGA+I+ Sbjct: 241 KDTTSVDLPIPDYEAAIGKSLKGMKIGIPKEYRVDGMPDEIEELWQKGIQYLKDAGAEII 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLP+T+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPNTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GV ILTP TP++AF L E+ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVHAILTPATPSAAFGLADED 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +K +PLGLQLIG+PF EETLF I Sbjct: 421 LANDPVKMYLNDIFTVTVNMAGLPGIAVPAGINDKGLPLGLQLIGRPFEEETLFQAAHAI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|254500288|ref|ZP_05112439.1| Amidase, putative [Labrenzia alexandrii DFL-11] gi|222436359|gb|EEE43038.1| Amidase, putative [Labrenzia alexandrii DFL-11] Length = 494 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/493 (63%), Positives = 390/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R+ L++KD ++ EL D+++ IE +N +NAY+ V A KAR A+ SD Sbjct: 1 MTDLTKLTIAEAREGLKNKDYTSTELTDAFLGNIEQANGALNAYVAVTADKAREMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+ LEGIP+GIKD F T+G+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 DTLAKGEGGALEGIPLGIKDLFGTEGVHTQACSHILDGFKPAYESTVTSNLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYG VI+PWR S PGGSSGGS++AVA +C + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGDVINPWRKTGSNQDLVPGGSSGGSASAVAARMCMGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I TVRDSAILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIAHTVRDSAILLKSMASVDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++ VPDYE A+ +S++G+ +GIP EYRLD + ID+ WQQGI+WLKDAGA+IV Sbjct: 241 KDTTSVDIEVPDYEAAIGKSVKGLKIGIPAEYRLDGMPGEIDELWQQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +I++PHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI+EMYENTR+ GFG EVK Sbjct: 301 DIAMPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIVEMYENTRAEGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+K+RTLIKRDF A+ GVD ILTP TP++AF + ++ Sbjct: 361 RRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDLAWANGVDAILTPATPSAAFGVADQD 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +S + ND+FTV VNMAGLP ISVPA L + +PLGLQLIG+PF E TLF VGQ+I Sbjct: 421 LHSDPVKMYLNDIFTVTVNMAGLPGISVPAGLSSEGLPLGLQLIGKPFDESTLFQVGQVI 480 Query: 481 EKEAGYFRPHKWW 493 E AG F P KWW Sbjct: 481 EDAAGSFEPEKWW 493 >gi|222148320|ref|YP_002549277.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] gi|254790373|sp|B9JVJ1|GATA_AGRVS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|221735308|gb|ACM36271.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] Length = 493 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/493 (63%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R++L SKDI+AVEL D+Y+ AIE +N +NAY+ V + AR A+ SD Sbjct: 1 MSELTSLTIAEAREKLVSKDITAVELTDAYLGAIEAANGAINAYVTVTPEIARDMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G A LEGIP+G+KD FAT+ +HTQACS+ILDGF+P YESTVTQ LW+ GAVMLG Sbjct: 61 ARLATGKAGALEGIPLGVKDLFATRDVHTQACSNILDGFKPKYESTVTQNLWNEGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNE S+YGPV++PWR+ S +K PGGSSGGS+AAVA LCA + +DT Sbjct: 121 KLNMDEFAMGSSNENSFYGPVVNPWRATGSEEKLVPGGSSGGSAAAVAARLCAGATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI+++A SLDQAG I R VRD+AILLK++A DE Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAYASSLDQAGPIARDVRDAAILLKSMASIDE 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+L P+YE A+ QS++GM +GIP+EYR+D + I+ WQ+G++WLK+AGA+IV Sbjct: 241 KDTTSVDLLAPNYEAAIGQSVKGMKIGIPREYRVDGMPEEIEALWQKGMAWLKEAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++ AEASSNLARYDGVRYGLRV+GKDI +MYE +R+ GFG+EV+ Sbjct: 301 DISLPHTKYALPAYYIVASAEASSNLARYDGVRYGLRVDGKDIADMYEKSRAAGFGKEVQ 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS+ YD++YLRA+K+RTLIKRDF + F GVD ILTP TP+SAF +G ++ Sbjct: 361 RRILMGTYVLSAGYYDAYYLRAQKVRTLIKRDFEQVFAAGVDAILTPITPSSAFAIGDKD 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+F+V +NMAGLP +SVPA L K +PLGLQLIG+PF EETLF +I Sbjct: 421 LAADPVKMYLNDIFSVTLNMAGLPGLSVPAGLDAKGLPLGLQLIGKPFEEETLFKTAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 481 EQAAGKFTPAQWW 493 >gi|306845927|ref|ZP_07478494.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella sp. BO1] gi|306273562|gb|EFM55407.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella sp. BO1] Length = 493 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/493 (64%), Positives = 396/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD+L++K I+A EL D+Y+ AI+ +N+ +NAY+ V +AR+ A+ SD Sbjct: 1 MSELTALTIAEARDKLKAKAITATELTDAYLSAIDAANAAINAYVTVTHDQARSMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A LEGIP+G+KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPV +PWR+ S PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDL 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE AL +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAALGRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E+ Sbjct: 361 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADED 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +I Sbjct: 421 LVNDPVKMYLNDIFTVTVNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVI 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 481 EQAAGRFTPAKWW 493 >gi|325292679|ref|YP_004278543.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Agrobacterium sp. H13-3] gi|325060532|gb|ADY64223.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Agrobacterium sp. H13-3] Length = 529 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/493 (63%), Positives = 395/493 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R++L++K+ SA+EL D+YI AI+ +N +NAY+ + +KAR A+ SD Sbjct: 37 MTDLTSLTIAEAREKLKAKEFSALELTDAYIAAIDAANGALNAYVALTPEKARDMAKASD 96 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G A +LEG+P+G+KD FAT+ +HTQACSH+LDGF+P YESTVTQ LWD GAVMLG Sbjct: 97 GRIAAGAAGELEGVPLGVKDLFATRDVHTQACSHVLDGFKPKYESTVTQNLWDQGAVMLG 156 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNE+S+YGP I+PWR+ S K PGGSSGGS+AAVA LCA + TDT Sbjct: 157 KLNMDEFAMGSSNESSWYGPAINPWRANGSEQKLVPGGSSGGSAAAVAAHLCAGATATDT 216 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI+++A SLDQAG I R VRD+AILLK +A D Sbjct: 217 GGSIRQPAAFTGTVGIKPTYGRCSRYGIVAYASSLDQAGPIARDVRDAAILLKTMASVDA 276 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE+A+ QS++G+ +GIP+EYR+D + I+K W +G+ WL+DAGA++V Sbjct: 277 KDTTSVDLPVPDYEKAIGQSLKGLKIGIPREYRVDGMPEEIEKLWAKGVEWLRDAGAEVV 336 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+GKDI +MYE +R+ GFG+EV+ Sbjct: 337 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGKDIADMYEKSRAAGFGKEVQ 396 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++YL+A+K+RTLIKRDF F +GVD IL P TP+SAF +G EE Sbjct: 397 RRIMVGTYVLSAGYYDAYYLKAQKVRTLIKRDFENVFHEGVDAILAPITPSSAFAVGDEE 456 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + DVFT+ VNMAGLP +SVPA L K +PLGLQLIG+PF EETLF I Sbjct: 457 LASDPVKMYLQDVFTITVNMAGLPGLSVPAGLDGKGLPLGLQLIGKPFEEETLFKTAHAI 516 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 517 EQAAGKFTPAKWW 529 >gi|319408541|emb|CBI82194.1| glutamyl-tRNA amidotransferase subunit A [Bartonella schoenbuchensis R1] Length = 494 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/493 (62%), Positives = 389/493 (78%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L +D+ A EL ++Y++AIE +N +N Y+ + A++A A ESD Sbjct: 1 MTDLTTLTIAQARDALTKRDLKATELTEAYLKAIELANPTLNVYVALTAEQATKMAAESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KR G A LEGIP+GIKD FAT+ +HTQACS+ILDGF+P YESTVT LW +GAVMLG Sbjct: 61 KRFAKGQAGILEGIPLGIKDLFATQDVHTQACSYILDGFKPKYESTVTANLWKDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS+YGP I+PWR S +K PGGSSGGS++AVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSHYGPAINPWRKKGSDEKLVPGGSSGGSASAVAARLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G I++A SLDQAG I R VRD AI+LK++A +D+ Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTIAYASSLDQAGPIGRDVRDCAIMLKSMASFDD 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VN+PVPDYE + QSI+GM +GIPKEY ++ +S I WQ+G+ WLK+AGA+I+ Sbjct: 241 KDSTSVNVPVPDYENYIGQSIKGMKIGIPKEYYIEGMSAEIVDLWQKGMDWLKEAGAQII 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYY+++PAEASSNLARYDGVR+GLR+ GKD++EMYENTRS GFG EVK Sbjct: 301 DISLPHTKYALPAYYVVAPAEASSNLARYDGVRFGLRMPGKDVIEMYENTRSSGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YLRA+K+RTLIKRDF + F GVD ILTPTTP SAF + E+ Sbjct: 361 RRILIGTYVLSAGYYDAYYLRAQKVRTLIKRDFDQCFTAGVDAILTPTTPVSAFGIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+ TV+VNMAGLP ISVPA L +PLGLQLIG+PF EET+F + II Sbjct: 421 IKNDTIAMYLNDICTVSVNMAGLPGISVPAGLSLNGLPLGLQLIGKPFAEETIFQIAYII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG KWW Sbjct: 481 EQAAGTLNAEKWW 493 >gi|49474239|ref|YP_032281.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bartonella quintana str. Toulouse] gi|81647052|sp|Q6FZS9|GATA_BARQU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|49239743|emb|CAF26125.1| Glutamyl-tRNA (gln) amidotransferase subunit A [Bartonella quintana str. Toulouse] Length = 496 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/493 (62%), Positives = 387/493 (78%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++R L ++ A EL ++Y++AIE +N +N Y+ + A++A A ESD Sbjct: 1 MTDLTTLTIAQARYALTKREFKATELTEAYLKAIELANPTLNTYVAITAEQAMKMATESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G LEGIP+GIKD FAT+G+HTQACS+ILDGF+P YESTVT LW +GA+MLG Sbjct: 61 SRLARGQGGILEGIPLGIKDLFATQGVHTQACSYILDGFKPPYESTVTANLWRDGAIMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR S +K PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRKKGSNEKLVPGGSSGGSAAAVAAQLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+I+FA SLDQAG I R VRD AILLK++A +DE Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVIAFASSLDQAGPIGRNVRDCAILLKSMASFDE 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VNLPVPDYE + QSI+GM +G+PKEY L+ ++ I + WQ+GI+ LK+AGAKI+ Sbjct: 241 KDSTSVNLPVPDYENYIGQSIKGMEIGVPKEYYLEGMASEIVELWQKGINCLKEAGAKII 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVR+GLRV GKD +EMYENTRS GFG EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRFGLRVPGKDAIEMYENTRSAGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLSS YD++YL+A+K+RTL+KRDF + F G+D ILTP TPT AF + E+ Sbjct: 361 RRILIGTYVLSSGYYDAYYLQAQKVRTLVKRDFDQCFASGIDAILTPATPTPAFGIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVP+ L +PLGLQLIG+PF EE +F + II Sbjct: 421 IKNDTVAMYLNDIFTVPVNMAGLPGISVPSGLSSTGLPLGLQLIGKPFAEEVIFQIAHII 480 Query: 481 EKEAGYFRPHKWW 493 E+ G F KWW Sbjct: 481 EQAIGTFSTEKWW 493 >gi|319898950|ref|YP_004159043.1| glutamyl-tRNA amidotransferase subunit A [Bartonella clarridgeiae 73] gi|319402914|emb|CBI76465.1| glutamyl-tRNA amidotransferase subunit A [Bartonella clarridgeiae 73] Length = 494 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/493 (63%), Positives = 391/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L+ D+ AVEL ++Y++AIE +N +NAY+ V A++AR A ESD Sbjct: 1 MTDLTTLTIAQARDALKKGDLKAVELTEAYLKAIELANPILNAYVAVTAEQARKMAAESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+A LEGIP+GIKD FAT+ IHTQACS+ILDGF+P YESTVT LW +GAVMLG Sbjct: 61 IRLAKGEAGILEGIPLGIKDLFATQDIHTQACSYILDGFKPKYESTVTANLWKDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YGP I+PWR +S +K PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSCYGPTINPWRKKESDEKLVPGGSSGGSAAAVAARLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+I++A SLDQAG + R VRD AI+LK++A +D+ Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGMIAYASSLDQAGPVGRDVRDCAIMLKSMASFDD 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+LPV DYE L QSI+GM +GIPKEY ++ +S I WQ+GI+WLK+AGA+I+ Sbjct: 241 KDSTSVDLPVLDYENYLGQSIKGMKIGIPKEYYIEGMSDEIVDLWQKGINWLKEAGAEII 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ISLPHT+Y+LPAYYI++PAEASSNLARYDGVR+GLRV GKD++EMYENTRS GFG EVK Sbjct: 301 NISLPHTKYSLPAYYIVAPAEASSNLARYDGVRFGLRVSGKDVIEMYENTRSAGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+++RTLIKRDF F+ G+D ILTPTTPTSAF + E+ Sbjct: 361 RRILIGTYVLSAGYYDAYYLKAQRVRTLIKRDFDHCFDLGIDAILTPTTPTSAFSIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVPA L +PLGLQLIG+ F EE + + II Sbjct: 421 IKNDTIAMYLNDIFTVPVNMAGLPGISVPAGLSLNGLPLGLQLIGRSFSEEVILKIAYII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG KWW Sbjct: 481 EQAAGILNAEKWW 493 >gi|328544235|ref|YP_004304344.1| glutamyl-tRNA(Gln) amidotransferase subunit A [polymorphum gilvum SL003B-26A1] gi|326413977|gb|ADZ71040.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum SL003B-26A1] Length = 491 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/493 (63%), Positives = 383/493 (77%), Gaps = 3/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++E+RD LR KD +A+EL ++++ AIE +N +NAY+ V AR A SD Sbjct: 1 MTDLTRQTLAEARDGLRRKDFTALELTEAFLSAIETANPALNAYVAVTGDTAREMARVSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+A LEGIP+GIKD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 61 ARLARGEAGALEGIPLGIKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYG V++PWR S PGGSSGGS+AAVA LC + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGTVVNPWRKRGSNAALVPGGSSGGSAAAVAASLCLGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I +TVRD AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAKTVRDCAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVPDYE ++ +S+ G+ +GIPKEYR+D + I+ WQQGI+WLKDAGA+IV Sbjct: 241 KDTTSVDRPVPDYEASVGRSVTGLKIGIPKEYRVDGMPAEIEALWQQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV G DI++MYE TR+ GFG EV+ Sbjct: 301 DISLPHTRYALPAYYIVAPAEASSNLARYDGVRYGLRVPGDDIIDMYEKTRAAGFGAEVQ 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+K+RTLIKRDF A+ GVD ILTPTTP +AF G+ Sbjct: 361 RRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDLAWAAGVDAILTPTTPDAAFAPGEIT 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP ISVPA L +PLGLQLIG+PF EETLF VG I Sbjct: 421 D---PVTMYLNDIFTVTVNMAGLPGISVPAGLSASGLPLGLQLIGRPFDEETLFQVGSAI 477 Query: 481 EKEAGYFRPHKWW 493 E+ AG F+ WW Sbjct: 478 EQAAGRFQAETWW 490 >gi|319405721|emb|CBI79344.1| glutamyl-tRNA amidotransferase subunit A [Bartonella sp. AR 15-3] Length = 496 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 312/493 (63%), Positives = 391/493 (79%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L+ D+ A EL ++Y++AIE +N +NAY+ V A++A A ESD Sbjct: 1 MTDLITLTIAQARDVLKKGDLKATELTEAYLKAIELANPILNAYVAVTAEQAIKMAAESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G A LEGIP+GIKD FAT+ +HTQACS+ILDGF+P YESTVT LW +GAVMLG Sbjct: 61 IRLAKGKAGILEGIPLGIKDLFATQDVHTQACSYILDGFKPKYESTVTANLWKDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSN+TS YGP I+PWR +S +K PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNKTSCYGPTINPWRKKESDEKLVPGGSSGGSAAAVAARLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+I++A SLDQAG I R VRD AI+LK++A +D+ Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGMIAYASSLDQAGPIGRDVRDCAIMLKSMASFDD 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+LPVPDYE L QSI+GM +GIPKEY ++ +S I WQ+GI+WLKDAGA+I+ Sbjct: 241 KDSTSVDLPVPDYESYLGQSIKGMKIGIPKEYYIEGMSDEIFDLWQKGINWLKDAGAEII 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVR+GLR+ GKD++EMYENTRS GFG EVK Sbjct: 301 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRFGLRIPGKDVIEMYENTRSSGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ Y+++YL+A+K+RTLIKRDF FE G+D ILTPTTPTSAF + E+ Sbjct: 361 RRILIGTYVLSAGYYNAYYLKAQKVRTLIKRDFDHCFELGIDAILTPTTPTSAFSITDEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVPA L +PLGLQLIG+ F EE +F + II Sbjct: 421 IKNDTIAMYLNDIFTVPVNMAGLPGISVPAGLSLDGLPLGLQLIGRSFSEEVIFQIAYII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG KWW Sbjct: 481 EQAAGKLNAEKWW 493 >gi|319407283|emb|CBI80924.1| glutamyl-tRNA amidotransferase subunit A [Bartonella sp. 1-1C] Length = 494 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 309/493 (62%), Positives = 389/493 (78%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L+ D+ A+EL ++Y++AIE +N +NAY+ + A++A A ESD Sbjct: 1 MTDLITLTIAQARDALKKGDLKAIELTEAYLKAIELANPILNAYVAITAEQATKMAVESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R++ G A LEGIP+GIKD FAT+ IHTQACS+ILDGF+P YESTVT LW +GAVMLG Sbjct: 61 IRLVKGKAGILEGIPLGIKDLFATQDIHTQACSYILDGFKPKYESTVTANLWKDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSN+TS YGP I+PWR +S +K PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNKTSCYGPTINPWRKKESDEKLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVG+KPTYGRCSR G+I++A SLDQAG I R VRD AI+LK++A +D Sbjct: 181 GGSIRQPAAFTGTVGVKPTYGRCSRWGMIAYASSLDQAGPIGRDVRDCAIMLKSMASFDS 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+LPVPDYE L QSI+GM +GIPKEY ++ +S I WQ+GI+WLKDAGA+IV Sbjct: 241 KDSTSVDLPVPDYESYLGQSIKGMKIGIPKEYYIEGMSEEIINLWQKGINWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALP YYI++PAEASSNLARYDGVR+GLR+ GKD++EMYENTRS GFG EV+ Sbjct: 301 DISLPHTKYALPTYYILAPAEASSNLARYDGVRFGLRIPGKDVIEMYENTRSAGFGDEVR 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+K+RTLIKRDF F G+D ILTP TPTSAF + E+ Sbjct: 361 RRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDHCFGLGIDAILTPATPTSAFSIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVPA L +PLGLQLIG+ F EE +F + II Sbjct: 421 IKNDTIAMYLNDIFTVPVNMAGLPGISVPAGLSLDGLPLGLQLIGRSFSEEVIFKIAYII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG KWW Sbjct: 481 EQAAGTLNAEKWW 493 >gi|319404278|emb|CBI77871.1| glutamyl-tRNA amidotransferase subunit A [Bartonella rochalimae ATCC BAA-1498] Length = 494 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 308/493 (62%), Positives = 388/493 (78%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L+ D+ A+EL ++Y++AIE +N +NAY+ + A++A A ESD Sbjct: 1 MTDLITLTIAQARDALKKGDLKAIELTEAYLKAIELANPILNAYVAITAEQATKMAVESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G A LEGIP+GIKD FAT+ IHTQACS+ILDGF+P YESTVT LW +GAVMLG Sbjct: 61 IRLAKGKAGILEGIPLGIKDLFATQDIHTQACSYILDGFKPKYESTVTANLWKDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSN+TS YGP I+PWR +S +K PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNKTSCYGPTINPWRKKESDEKLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+I++A SLDQAG I R VRD AI+LK++A +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGMIAYASSLDQAGPIGRDVRDCAIMLKSMASFDS 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+LPVPDYE L QSI+GM +GIPKEY ++ +S I WQ+G++WLKDAGA+I+ Sbjct: 241 KDSTSVDLPVPDYESYLGQSIKGMKIGIPKEYYIEGMSEEIVDLWQKGMNWLKDAGAEII 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALP YYI++PAEASSNLARYDGVR+GLR+ GKD++EMYENTRS GFG EV+ Sbjct: 301 DISLPHTKYALPTYYILAPAEASSNLARYDGVRFGLRIPGKDVIEMYENTRSAGFGDEVR 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+K+RTLIKRDF F G+D ILTP TPTSAF + E+ Sbjct: 361 RRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDHCFGLGIDAILTPATPTSAFSIADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ ND+FTV VNMAGLP ISVPA L +PLGLQLIG+ F EE +F + II Sbjct: 421 IKNDTIAMYLNDIFTVPVNMAGLPGISVPAGLSLDGLPLGLQLIGRSFSEEVIFKIAYII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG KWW Sbjct: 481 EQAAGTLNAEKWW 493 >gi|121602404|ref|YP_989123.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bartonella bacilliformis KC583] gi|166217644|sp|A1UT20|GATA_BARBK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|120614581|gb|ABM45182.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Bartonella bacilliformis KC583] Length = 494 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 307/493 (62%), Positives = 384/493 (77%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++RD L+ D A EL ++Y+QAIE +N +NAY+ V A++A A ESD Sbjct: 1 MTDLTMLTIAQARDSLKKGDFKATELTEAYLQAIELANPILNAYVAVTAEQAMRMAAESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+A LEGIP+GIKD FAT +HTQ CS+ILDGF+P YESTVT LW +GAVMLG Sbjct: 61 NRLAKGEAGILEGIPLGIKDLFATYDVHTQGCSYILDGFKPKYESTVTANLWKDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR S +K PGGSSGGSSAAVA LC + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRKKGSDEKLVPGGSSGGSSAAVAARLCVGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G I++A SLDQAG I R VRD AI+L+++A +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTIAYASSLDQAGPIGRDVRDCAIMLRSMASFDR 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+LP+PDYE+ + QSI+GM +GIPKEYRL+++S + + WQ+G+ +LK+AGA+IV Sbjct: 241 KDSTSVDLPIPDYEKCIGQSIKGMKIGIPKEYRLEWMSTEVIELWQKGMDFLKEAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPH +YALP+YYI++ AEASSNLARYDGVR+GLR+ GKDI+EMYE TRS GFG EVK Sbjct: 301 DISLPHVKYALPSYYIVASAEASSNLARYDGVRFGLRMPGKDIVEMYEKTRSAGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLSS YD++Y++A+K+RTLIK DF + F GVD ILTP TPT AF L E+ Sbjct: 361 QRILIGTYVLSSGYYDAYYIKAQKVRTLIKNDFDQCFAIGVDAILTPVTPTPAFGLADEK 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + S+ ND+FTV VNM GLP +SVPA L +PLGLQLIG+PF EE + + II Sbjct: 421 IKNDSIAMYLNDIFTVPVNMVGLPGVSVPAGLSSSGLPLGLQLIGKPFAEEVILQIAYII 480 Query: 481 EKEAGYFRPHKWW 493 E+ AG F KWW Sbjct: 481 EQAAGTFSAKKWW 493 >gi|254474208|ref|ZP_05087599.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudovibrio sp. JE062] gi|211956738|gb|EEA91947.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudovibrio sp. JE062] Length = 495 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 312/494 (63%), Positives = 391/494 (79%), Gaps = 4/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +++L + ++E+RD+L ++D +A EL +SY+ AIE+ N +NAY+ V AR A+ SD Sbjct: 3 VTDLTKLTIAEARDKLAARDFTATELTESYLGAIESGNEALNAYVAVTGDIAREQAKASD 62 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+AR LEGIP+GIKD +ATKG+HTQACSHILDGF+P YESTVTQ L+D+GAVMLG Sbjct: 63 AKIAAGEARPLEGIPLGIKDLYATKGVHTQACSHILDGFKPEYESTVTQNLFDDGAVMLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS+YG V++PWR + PGGSSGGS++AVA LCAA+ +DT Sbjct: 123 KLNMDEFAMGSSNETSFYGNVVNPWRRNGTETALVPGGSSGGSASAVAAHLCAAATASDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVGIKPTYGRCSR G+++FA SLDQAG I RTVRD+AILLK++A D Sbjct: 183 GGSIRQPAALTGTVGIKPTYGRCSRWGMVAFASSLDQAGPIGRTVRDNAILLKSMASVDA 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVP+YE + +SI+GM +GIPKEY +D + I+ WQQGI+WLK+AGA+IV Sbjct: 243 KDTTSVDAPVPNYEEFVGKSIKGMKIGIPKEYHMDGIPAEIEALWQQGIAWLKEAGAEIV 302 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV G DI+EMYENTR+ GFG EVK Sbjct: 303 EISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGNDIVEMYENTRAAGFGDEVK 362 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+MIGTYVLS+ YD++YL+A+K+RTLIK+DF A+ GVD ILTPTTP +AF G+ Sbjct: 363 RRVMIGTYVLSAGYYDAYYLKAQKVRTLIKQDFDNAWADGVDAILTPTTPDAAFAPGEIT 422 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + NDVFTV NMAG+P +S+PA L + +PLGLQLIG+PF E TLF VG++I Sbjct: 423 D---PVTMYMNDVFTVTANMAGVPGMSIPAGLNKDGLPLGLQLIGKPFDEGTLFQVGEVI 479 Query: 481 EKEAGYFRPH-KWW 493 E+ AG F P WW Sbjct: 480 EQAAGRFEPSANWW 493 >gi|170742460|ref|YP_001771115.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylobacterium sp. 4-46] gi|168196734|gb|ACA18681.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium sp. 4-46] Length = 497 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 309/493 (62%), Positives = 386/493 (78%), Gaps = 3/493 (0%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++E+RD LR K SA E+ +++ A+ + + +NAY+ ++A A AE +D+ Sbjct: 6 ADLTELTLAEARDGLRRKAFSAREIAQAHLDAVARARA-LNAYLIETPERALAMAEVADR 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +I G+AR LEG+P+GIKD F T + T A S IL+GFRPHYESTV+ LW +GAVMLGK Sbjct: 65 KIAAGEARPLEGLPLGIKDLFCTHDVPTTAGSRILEGFRPHYESTVSHNLWRDGAVMLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN+DEFAMGSSNETS YGPV+SPWR DS PGGSSGGS+AAVA LC + TDTG Sbjct: 125 LNLDEFAMGSSNETSAYGPVVSPWRRRDSEAPLVPGGSSGGSAAAVAARLCLGATATDTG 184 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG ITRTVRDSAI+L ++AG+D Sbjct: 185 GSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPITRTVRDSAIMLASMAGHDPK 244 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D TCV+ PVPDYE A+ + ++G+T+GIPKEYR+D + I++ W QG WL+ AGA+IVE Sbjct: 245 DTTCVDRPVPDYEAAVSRGVKGLTIGIPKEYRVDGMPAEIERLWHQGAEWLRAAGARIVE 304 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI+ MYE TR+ GFG+EVK Sbjct: 305 VSLPHTRYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIVGMYEQTRAAGFGREVKR 364 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF + GVD ILTP TP++AF LG E+ Sbjct: 365 RIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFETVYANGVDAILTPATPSAAFGLG-EKQ 423 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+ + NDVFTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF+ GQ+IE Sbjct: 424 NADPVEMYLNDVFTVTVNMAGLPGIAVPAGLDGQGLPLGLQLIGRPFDEETLFAAGQVIE 483 Query: 482 KEAGYFR-PHKWW 493 + AG P +WW Sbjct: 484 EAAGRIALPPRWW 496 >gi|182678845|ref|YP_001832991.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Beijerinckia indica subsp. indica ATCC 9039] gi|229485752|sp|B2IEA4|GATA_BEII9 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|182634728|gb|ACB95502.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 493 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 309/494 (62%), Positives = 388/494 (78%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++++++RD LR K ISA EL ++I+A+E + + +NA++ ++A+A A SD Sbjct: 1 MTELTDLSLADARDALRQKKISAAELAMAHIEAVEKARA-LNAFLLETPERAQAMARASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+A LEGIP+GIKD F T+G+ T A SHIL+ F P YES++T LW +GAVMLG Sbjct: 60 EKIARGEAGPLEGIPLGIKDLFCTEGVRTTAASHILENFVPAYESSITANLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETSY+GPV+SPWR ST TPGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSYFGPVVSPWRREGSTAPLTPGGSSGGSAAAVAARLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG ITRTVRD+AILL+++AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPITRTVRDAAILLRSMAGYDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T VNLPVPDYE AL +SI+GM +GIPKEYRLD + I K W QGI W+++AGA+ V Sbjct: 240 KDTTSVNLPVPDYEAALGRSIKGMRIGIPKEYRLDAMPAEIGKLWDQGIEWMREAGAEPV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT++ALPAYYI++PAEASSNLARYDGVR+GLRV GKDI MYE TR+ GFG+EV+ Sbjct: 300 EISLPHTRHALPAYYIVAPAEASSNLARYDGVRFGLRVPGKDIAGMYEETRAAGFGKEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++Y+RA+KIRTLIKRDF + FEQG+D ILTP TP++AF LG E+ Sbjct: 360 RRILIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEQVFEQGIDAILTPATPSAAFGLG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ND+FTV VNMAGLP I+VPA + + +PLGLQLIG+PF EETL ++ +I Sbjct: 419 GAKDPIEMYLNDIFTVTVNMAGLPGIAVPAGVSAEGLPLGLQLIGRPFDEETLIALSGVI 478 Query: 481 EKEAGYFR-PHKWW 493 E A P WW Sbjct: 479 EAAAPRVSYPSSWW 492 >gi|220923242|ref|YP_002498544.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylobacterium nodulans ORS 2060] gi|219947849|gb|ACL58241.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium nodulans ORS 2060] Length = 497 Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust. Identities = 309/493 (62%), Positives = 384/493 (77%), Gaps = 3/493 (0%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++E+RD LR K SA E+ +++ A+ + ++NAY+ ++A A AE +D+ Sbjct: 6 ADLTELTLAEARDGLRQKSFSAREITQAHLDAVAQAR-KLNAYLIETPERALAMAEVADR 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +I G+AR LEG+P+GIKD F T + T A S IL+GFRPHYESTV+ LW +GAVMLGK Sbjct: 65 KIAAGEARPLEGLPLGIKDLFCTHDVPTTAGSKILEGFRPHYESTVSHNLWRDGAVMLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN+DEFAMGSSNETS YGPVISPWR DS PGGSSGGS+AAVA LC + TDTG Sbjct: 125 LNLDEFAMGSSNETSAYGPVISPWRRRDSDAPLVPGGSSGGSAAAVAARLCLGATATDTG 184 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRD+AILL ++AG+D Sbjct: 185 GSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDTAILLTSMAGHDPK 244 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D TCV+ PVPDYE+A+ + ++G+T+GIPKEYR+D + I++ W QG WLK AGA IVE Sbjct: 245 DTTCVDRPVPDYEKAVGRGVKGLTIGIPKEYRVDGMPAEIERLWHQGAEWLKAAGATIVE 304 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLPHTQYALPAYYI++PAEASSNLARYDGVRYGLRV KDI+ MYE TR+ GFG+EVK Sbjct: 305 VSLPHTQYALPAYYIVAPAEASSNLARYDGVRYGLRVPAKDIVGMYEQTRAAGFGREVKR 364 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF + GVD ILTP TP++AF +G E+ Sbjct: 365 RIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAVYANGVDAILTPATPSAAFGIG-EKQ 423 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+ + NDVFTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF+ GQ+IE Sbjct: 424 NADPVEMYLNDVFTVTVNMAGLPGIAVPAGLDAQGLPLGLQLIGRPFDEETLFAAGQVIE 483 Query: 482 KEAGY-FRPHKWW 493 + AG P +WW Sbjct: 484 EAAGRTVLPPRWW 496 >gi|86749558|ref|YP_486054.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodopseudomonas palustris HaA2] gi|109891978|sp|Q2IXB7|GATA_RHOP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|86572586|gb|ABD07143.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodopseudomonas palustris HaA2] Length = 492 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 308/493 (62%), Positives = 382/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L +K +AVEL D+++ AIE + +NAY+ +AR A+ +D Sbjct: 1 MTDLTSLTLAEARDGLVNKSFTAVELTDAHLAAIEAARV-LNAYVLETPDQARQMAQAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+ L GIP+GIKD FATKG T ACS IL F+P YESTVT +LW +GAV+LG Sbjct: 60 AQIAKGEGGPLAGIPLGIKDLFATKGTRTTACSKILGDFKPPYESTVTSQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVVNPWRRAGSETKLVPGGSSGGSAAAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRDSAILL ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDSAILLGSMAGFDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVP+YE A+ S++GM +GIPKEYRLD + I+K W QG WLK AGA++V Sbjct: 240 KDTTSVDRPVPNYEAAIGGSVKGMKIGIPKEYRLDGMPAEIEKLWMQGAEWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RV G++I+EMYENTR+ GFG EVK Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGTRVNGRNIVEMYENTRAAGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF + F+QGV ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEQCFDQGVSAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF EETLFS+G +I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGSDSQGLPLGLQLIGRPFDEETLFSLGDVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 479 EQSAGRFTPAKWW 491 >gi|92117798|ref|YP_577527.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrobacter hamburgensis X14] gi|122417650|sp|Q1QL30|GATA_NITHX RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91800692|gb|ABE63067.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nitrobacter hamburgensis X14] Length = 491 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 300/493 (60%), Positives = 385/493 (78%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L +K +A+EL D++++AIE + +NAY+ +ARA A E+D Sbjct: 1 MTDLTSLTLAEARDGLANKSFTALELTDAHLEAIERARV-LNAYVLETPAQARAMAREAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+ L G+P+G+KD FAT+G T ACS ILD F+P YESTVT +LW +GAVMLG Sbjct: 60 VRIAKGEGGPLNGLPLGVKDLFATEGTRTTACSQILDDFKPPYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS++AVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSRFGPVVNPWRRQGSDAKLVPGGSSGGSASAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRD+AIL+ ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDAAILMHSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVPDYE A+ +S++GM +GIPKEYRLD + I+K W QG WLK AGA++V Sbjct: 240 KDTTSVDRPVPDYEAAVGKSVKGMKIGIPKEYRLDGMPAEIEKLWTQGAGWLKSAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RVEG++I+EMYENTR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARVEGRNIVEMYENTRAKGFGAEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + + G+D ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDCYAAGIDAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV NMAGLP I+VPA + +PLGLQL+G+PF EETL S+G++I Sbjct: 419 AGADPIEMYLNDIFTVTANMAGLPGIAVPAGRDAQGLPLGLQLVGRPFDEETLLSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 479 EQAAGRFTPERWW 491 >gi|39936170|ref|NP_948446.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodopseudomonas palustris CGA009] gi|192291888|ref|YP_001992493.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodopseudomonas palustris TIE-1] gi|81562240|sp|Q6N575|GATA_RHOPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229486003|sp|B3Q9W5|GATA_RHOPT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|39650025|emb|CAE28548.1| Glu-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas palustris CGA009] gi|192285637|gb|ACF02018.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodopseudomonas palustris TIE-1] Length = 492 Score = 614 bits (1584), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/493 (62%), Positives = 384/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L +K +AVEL D+++ AIE + +NAY+ +AR A+ +D Sbjct: 1 MTDLTSLTLAEARDGLANKSFTAVELTDAHLAAIEAARV-LNAYVLETPDQARQMAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+ L G+P+GIKD FATKG T ACS IL F+P YESTVT +LW +GAV+LG Sbjct: 60 AQIAKGEGGPLAGLPLGIKDLFATKGERTTACSKILGDFKPTYESTVTTQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPVI+PWR S K PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVINPWRRAGSDAKLVPGGSSGGSAAAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRDSAILL+++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDSAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVP+YE A+ S++GM +GIPKEYRLD + I+K W QG WLK AGA++V Sbjct: 240 KDTTSVDRPVPNYEAAVGGSVKGMKIGIPKEYRLDGMPAEIEKLWSQGAEWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RV G++I+EMYENTR+ GFG EVK Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARVNGRNIIEMYENTRAAGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF + F+QGV ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEQCFDQGVSAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF E+TLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGSDSQGLPLGLQLIGRPFDEDTLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 479 EQAAGRFTPAKWW 491 >gi|316933660|ref|YP_004108642.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas palustris DX-1] gi|315601374|gb|ADU43909.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodopseudomonas palustris DX-1] Length = 492 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/493 (61%), Positives = 385/493 (78%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L +K +A+EL D+++ AIE + + +NAY+ +AR A+ +D Sbjct: 1 MTDLTSLTLAEARDGLANKSFTALELTDAHLAAIEAARA-LNAYVLETPDQARQMAQAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+ L GIP+GIKD FAT+G T ACS IL F+P YESTVT +LW +GAV+LG Sbjct: 60 AQIAKGEGGPLAGIPLGIKDLFATRGERTTACSKILGDFKPTYESTVTSQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVVNPWRRAGSEAKLVPGGSSGGSAAAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRDSAILL+++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDSAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVP+YE A+ S++GM +GIPKEYRLD + I+K W QG WLK AGA++V Sbjct: 240 KDTTSVDRPVPNYEAAVGGSVKGMKIGIPKEYRLDGMPAEIEKLWSQGAEWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RV G++I+EMYENTR+ GFG EVK Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARVGGRNIVEMYENTRAAGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF + F+QGV ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEQCFDQGVSAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF E+TLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGSDSQGLPLGLQLIGRPFDEDTLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 479 EQSAGRFTPTKWW 491 >gi|91977484|ref|YP_570143.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodopseudomonas palustris BisB5] gi|123762647|sp|Q135J7|GATA_RHOPS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91683940|gb|ABE40242.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodopseudomonas palustris BisB5] Length = 492 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 303/493 (61%), Positives = 383/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L K +A+EL ++++ AIE + +NA++ ++AR A+ +D Sbjct: 1 MTDLTSLTLAEARDGLARKSFTALELTEAHLTAIEAARG-LNAFVLETPEQARKMAQAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I GD L GIP+GIKD FATK T ACS IL F P YESTVT +LW +GAVM+G Sbjct: 60 AQIATGDGGPLAGIPLGIKDLFATKDTRTTACSKILGDFHPPYESTVTTQLWRDGAVMVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVVNPWRRAGSETKLVPGGSSGGSAAAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRDSAILL+++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDSAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVP+YE A+ S++GM +GIPKEYRL+ + P I++ W QG WLK +GA++V Sbjct: 240 KDTTSVDRPVPNYETAIGASVKGMKIGIPKEYRLEGMPPEIERLWTQGAEWLKASGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RV G++I+EMYENTR+ GFG EVK Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARVNGRNIVEMYENTRAAGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF + F+QGV ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEQCFDQGVSAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF EETLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGADGQGLPLGLQLIGRPFDEETLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 479 EQAAGRFTPKKWW 491 >gi|217976924|ref|YP_002361071.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylocella silvestris BL2] gi|254790397|sp|B8EPC1|GATA_METSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|217502300|gb|ACK49709.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylocella silvestris BL2] Length = 493 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 309/495 (62%), Positives = 384/495 (77%), Gaps = 5/495 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + ++E+RD L +KD SAVELV + + IE + + +NA+I+ +KA A AE SD Sbjct: 1 MTTLTDLTLAEARDALLNKDFSAVELVKAQLAEIEQARA-LNAFIKETPEKALAMAEASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+A LEG+P+GIKD + T+G+ T A SHIL+GF+P YESTV+ LW +GAVMLG Sbjct: 60 ARIARGEAGPLEGVPLGIKDLYCTEGVETTAASHILEGFKPAYESTVSANLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETSY+GPV+SPWR S + PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSYFGPVVSPWRRKGSDARIVPGGSSGGSAAAVAARLCFGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRD+AIL++++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDAAILMRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ PVPDYE L + ++GM +GIPKEYR++ + ID W QG+ WLKDAGA IV Sbjct: 240 KDTTSVDAPVPDYEATLSRGVKGMKIGIPKEYRIEGVPAEIDALWGQGVEWLKDAGATIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI+ MYE TR+ GFG+EV+ Sbjct: 300 DISLPHTRYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIVGMYEATRAAGFGKEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIG YVLS+ YD++Y+RA+KIRTLIK+DF A+ GVD ILTP TP++AF G E Sbjct: 360 RRIMIGAYVLSAGYYDAYYVRAQKIRTLIKQDFDRAYADGVDAILTPATPSAAFGFG--E 417 Query: 421 NNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 SG +Y NDVFTV VNMAGLP ++VPA + + +PLGLQLIG+PF EETLF++ + Sbjct: 418 KGSGDPVEMYLNDVFTVTVNMAGLPGLAVPAGVSAEGLPLGLQLIGRPFDEETLFALASV 477 Query: 480 IEKEAGYFR-PHKWW 493 IEK A P KWW Sbjct: 478 IEKAAPKIAPPPKWW 492 >gi|115525359|ref|YP_782270.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodopseudomonas palustris BisA53] gi|122295583|sp|Q07L94|GATA_RHOP5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|115519306|gb|ABJ07290.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodopseudomonas palustris BisA53] Length = 492 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 302/493 (61%), Positives = 386/493 (78%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L K +A++L D+++ AIE + +NAY+ ++ARA A+ +D Sbjct: 1 MTDLTSLTLAEARDGLAKKSFTALQLTDAHLAAIEAARV-LNAYVLETPEQARAMAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G A LEG+P+GIKD FAT+G+ T ACS IL F P YESTV+ +LW +GAV+LG Sbjct: 60 ERIARGAAGPLEGLPLGIKDLFATQGVRTTACSKILGEFSPPYESTVSAQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS++AVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVVNPWRREGSDAKLVPGGSSGGSASAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRD+AILL+++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDAAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE A+ +S++GM +GIPKEYR+D + I+ W+QG WLK AGA++V Sbjct: 240 KDTTSVDRAVPDYEAAIGRSVKGMKIGIPKEYRIDGMPAEIEALWKQGADWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RV G++I+EMYENTR+ GFG EVK Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARVNGRNIVEMYENTRAAGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF E F +GV ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEECFAKGVSAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF E+TLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGKDAQGLPLGLQLIGRPFDEDTLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P KWW Sbjct: 479 EQAAGRFTPTKWW 491 >gi|154247849|ref|YP_001418807.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Xanthobacter autotrophicus Py2] gi|229464486|sp|A7IMA7|GATA_XANP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|154161934|gb|ABS69150.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Xanthobacter autotrophicus Py2] Length = 494 Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust. Identities = 305/494 (61%), Positives = 385/494 (77%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++R+ L + ++VEL ++Y++A+E + +NAY+ + A A+ESD Sbjct: 1 MTKLTQLTLTQAREGLAQGEFTSVELTEAYLKAMEQARP-LNAYVLETPEIALEMAKESD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI +G+ LEGIP+GIKD FAT+G+ T AC+ ILD F P YESTVT LW +GAV+LG Sbjct: 60 RRIASGETGPLEGIPLGIKDMFATEGVRTTACAKILDNFIPQYESTVTSHLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV+SPWR PGGSSGGS+AAVA FLCA + GTDT Sbjct: 120 KLNNDEFAMGSSNETSAFGPVVSPWRRDGDETPLVPGGSSGGSAAAVAAFLCAGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG RTV D+A+LLK++AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPFARTVNDAAVLLKSMAGYDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+TCVN PVPDYE A+ SI+G +GIP+EYR+D +S ID W +G +LKDAGA+IV Sbjct: 240 KDSTCVNRPVPDYEEAVGASIKGKKIGIPREYRMDGMSDEIDALWTEGARFLKDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHTQYALPAYYI++PAEASSNLARYDGVR+G RV G+D++EMYENTR+ GFG EV+ Sbjct: 300 DISLPHTQYALPAYYIVAPAEASSNLARYDGVRFGERVPGRDVVEMYENTRAAGFGPEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+R+LIKRDF + F QGVD +LTP TP+ AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRSLIKRDFDQVFAQGVDAVLTPATPSPAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + NDVFTV VNMAGLP I+VPA L +PLGLQLIG+PF EETLFS+ ++I Sbjct: 419 LKADPVEMYLNDVFTVTVNMAGLPGIAVPAGLSADGLPLGLQLIGRPFEEETLFSLAEVI 478 Query: 481 EKEAGYFRPHK-WW 493 E+ AG F K WW Sbjct: 479 EEAAGRFPVDKQWW 492 >gi|240140073|ref|YP_002964550.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Methylobacterium extorquens AM1] gi|240010047|gb|ACS41273.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Methylobacterium extorquens AM1] Length = 493 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 308/494 (62%), Positives = 380/494 (76%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+RD L++KD SA E+ +++ AI+ + + +NAYI +A AE SD Sbjct: 1 MTALNELTLAEARDGLKAKDFSAREIAQAHLDAIDRAKA-LNAYIVATPDRALKMAEVSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+AR LEG+P+GIKD FAT+G+HT A S IL+GF PHYES V+ +LW +GAVMLG Sbjct: 60 QKIAKGEARPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHYESNVSSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YG ISPWR S PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGKTISPWRRQGSDAPLVPGGSSGGSAAAVAAHLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I RTV+D AILL ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPD+E A+ + ++G+T+GIPKEYR++ + I + W QG WL++AGA I Sbjct: 240 RDTTSVDMPVPDFEAAISRGVKGLTIGIPKEYRVEGMPAEIQRLWDQGADWLREAGATIK 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHTQYALPAYYI++PAEASSNLARYDGVRYGLRV GKDI MYENTR+ GFG+EVK Sbjct: 300 EISLPHTQYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIAGMYENTRAAGFGREVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF A+ GVD ILTP TP++AF +G E Sbjct: 360 RRIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAAYASGVDAILTPATPSAAFGIG-EM 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + NDVFTV VNMAGLP ISVPA L + +PLGLQLIG+PF EETLF+ Q I Sbjct: 419 ASADPVEMYLNDVFTVTVNMAGLPGISVPAGLDAQGLPLGLQLIGRPFDEETLFAAAQTI 478 Query: 481 EKEAGYFR-PHKWW 493 E AG P WW Sbjct: 479 ENAAGRISLPKAWW 492 >gi|218531579|ref|YP_002422395.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylobacterium chloromethanicum CM4] gi|254790396|sp|B7KWB0|GATA_METC4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|218523882|gb|ACK84467.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium chloromethanicum CM4] Length = 493 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 308/494 (62%), Positives = 380/494 (76%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+RD L++KD SA E+ +++ AI+ + + +NAYI +A AE SD Sbjct: 1 MTALNELTLAEARDGLKAKDFSAREIAQAHLDAIDRAKA-LNAYIVATPDRALKMAEVSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+AR LEG+P+GIKD FAT+G+HT A S IL+GF PHYES V+ +LW +GAVMLG Sbjct: 60 QKIAKGEARPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHYESNVSSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YG ISPWR S PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGKTISPWRRQGSDAPLVPGGSSGGSAAAVAAHLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I RTV+D AILL ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPD+E A+ + ++G+T+GIPKEYR++ + I + W QG WL++AGA I Sbjct: 240 RDTTSVDMPVPDFEAAISRGVKGLTIGIPKEYRVEGMPAEIQRLWDQGADWLREAGATIK 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHTQYALPAYYI++PAEASSNLARYDGVRYGLRV GKDI MYENTR+ GFG+EVK Sbjct: 300 EISLPHTQYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIAGMYENTRAAGFGREVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF A+ GVD ILTP TP++AF +G E Sbjct: 360 RRIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAAYAAGVDAILTPATPSAAFGIG-EM 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + NDVFTV VNMAGLP ISVPA L + +PLGLQLIG+PF EETLF+ Q I Sbjct: 419 ASADPVEMYLNDVFTVTVNMAGLPGISVPAGLDAQGLPLGLQLIGRPFDEETLFAAAQTI 478 Query: 481 EKEAGYFR-PHKWW 493 E AG P WW Sbjct: 479 ENAAGRISLPKAWW 492 >gi|304391699|ref|ZP_07373641.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130] gi|303295928|gb|EFL90286.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130] Length = 477 Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust. Identities = 303/480 (63%), Positives = 381/480 (79%), Gaps = 3/480 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +++ RD +K SA E+ D+Y+ AIE N ++NAYI A++AR A SD Sbjct: 1 MTDLTALTIADLRDGYAAKSFSAREVTDAYLGAIEAKNERLNAYIVTTAEQAREMAGASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K I G AR LEG+P+GIKD +ATKG+HTQACSHILDGF+P YESTVTQ LWD+GAVMLG Sbjct: 61 KAIAAGTARPLEGVPLGIKDLYATKGVHTQACSHILDGFKPPYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYG V++P + T+ PGGSSGGS+AAVA +CAA+ +DT Sbjct: 121 KLNMDEFAMGSSNETSYYGAVVNP---VSETEDLVPGGSSGGSAAAVAANMCAAATASDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVGIKPTYGRCSR G+++FA SLDQAG ITRTVRD+AI+L+++A D Sbjct: 178 GGSIRQPAALTGTVGIKPTYGRCSRWGMVAFASSLDQAGPITRTVRDAAIMLRSMASSDA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D TCV++PVPDYE A+ +SI+GM +GIP+EYR+D +S ID W++G L+DAGA+IV Sbjct: 238 KDTTCVDMPVPDYEAAVGKSIKGMKIGIPREYRMDGMSDEIDALWKEGAERLRDAGAEIV 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV+G++I +MYE TR+ GFG EV+ Sbjct: 298 DISLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVDGENITDMYERTRAAGFGDEVQ 357 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y RA+K+RTLIK+DF A+ G+D ILTP TP++AFP+G Sbjct: 358 RRIMIGTYVLSAGFYDAYYTRAQKVRTLIKQDFERAYADGIDCILTPATPSAAFPIGDVS 417 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + NDVFTV VNMAGLP I+VPA + K +PLGLQLIG+PF EE LF VG ++ Sbjct: 418 KQEDPVAMYLNDVFTVTVNMAGLPGIAVPAGVDAKGLPLGLQLIGKPFGEEDLFRVGAVL 477 >gi|188582763|ref|YP_001926208.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylobacterium populi BJ001] gi|229485878|sp|B1ZLM1|GATA_METPB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|179346261|gb|ACB81673.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium populi BJ001] Length = 493 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 305/494 (61%), Positives = 380/494 (76%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+RD L++KD SA E+ +++ AIE + + +NAYI +A A+ SD Sbjct: 1 MTALNELTLAEARDGLKAKDFSAREIAQAHLDAIERAKA-LNAYIVATPDRALKMADVSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+AR LEG+P+GIKD FAT+G+HT A S IL+GF PHYES V+ +LW +GAVMLG Sbjct: 60 EKIAKGEARPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHYESNVSSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YG ISPWR S PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGKTISPWRRQGSDTPLVPGGSSGGSAAAVAAHLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I RTV+D AILL ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPD+E A+ + ++G+T+GIPKEYR++ + I + W QG WL++AGA + Sbjct: 240 RDTTSVDVPVPDFEAAITRGVKGLTIGIPKEYRVEGMPAEIQRLWDQGADWLREAGATVR 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHTQYALPAYYI++PAEASSNLARYDGVRYGLRV G+DI MYENTR+ GFG+EVK Sbjct: 300 EISLPHTQYALPAYYIVAPAEASSNLARYDGVRYGLRVPGRDIAGMYENTRAAGFGREVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF A+ G+D ILTP TP++AF +G E Sbjct: 360 RRIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAAYASGIDAILTPATPSAAFGIG-EM 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + NDVFTV VNMAGLP ISVPA L + +PLGLQLIG+PF EETLF+ Q I Sbjct: 419 ASADPVEMYLNDVFTVTVNMAGLPGISVPAGLDAQGLPLGLQLIGRPFDEETLFAAAQTI 478 Query: 481 EKEAGYFR-PHKWW 493 E AG P WW Sbjct: 479 ENAAGRISLPKAWW 492 >gi|299135130|ref|ZP_07028321.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Afipia sp. 1NLS2] gi|298590107|gb|EFI50311.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Afipia sp. 1NLS2] Length = 491 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 295/493 (59%), Positives = 385/493 (78%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+++ L +K +A+EL D+++ A+E++ +NAY+ ++ARA A+++D Sbjct: 1 MTDLTALTLAEAKEGLAAKSFTALELTDAHLAAMESARV-LNAYVLETPERARAMAKDAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+ +L GIP+GIKD FATK + ACS IL F+P YEST+T +LW +GAV+LG Sbjct: 60 AKIAKGEGGNLLGIPLGIKDLFATKDVRLTACSKILGDFKPPYESTITAQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +G VI+PWR S PGGSSGGS++AVA LC + GTDT Sbjct: 120 KLNNDEFAMGSSNETSAFGSVINPWRREGSDTALVPGGSSGGSASAVAAGLCLGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VGIKPTYGRCSR G+++FA SLDQAG RTVRD+AI+L+++AG+D Sbjct: 180 GGSIRQPAAFTGIVGIKPTYGRCSRWGVVAFASSLDQAGPFARTVRDTAIMLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE A+ +S++GM +GIPKEYR+D +SP IDK W QG+ WLK AGA+IV Sbjct: 240 KDTTSVDRAVPDYEAAIGKSVKGMKIGIPKEYRIDGMSPEIDKLWAQGVEWLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYY+++PAEASSNLARYDGVRYG RV+GK I EMYENTR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPAYYVVAPAEASSNLARYDGVRYGARVDGKTISEMYENTRAAGFGPEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PL LQLIG+PF EETLFS+G+ I Sbjct: 419 GKADPVEMYLNDIFTVTVNMAGLPGIAVPAGKDAQGLPLALQLIGRPFDEETLFSLGETI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 479 EQAAGRFEPKRWW 491 >gi|254562498|ref|YP_003069593.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium extorquens DM4] gi|254269776|emb|CAX25748.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Methylobacterium extorquens DM4] Length = 493 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 307/494 (62%), Positives = 379/494 (76%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+RD L++KD SA E+ +++ AI+ + + +NAYI +A AE SD Sbjct: 1 MTALNELTLAEARDGLKAKDFSAREIAQAHLDAIDRAKA-LNAYIVATPDRALKMAEVSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+AR LEG+P+GIKD FAT+G+ T A S IL+GF PHYES V+ +LW +GAVMLG Sbjct: 60 QKIAKGEARPLEGLPLGIKDLFATQGVDTTAGSKILEGFEPHYESNVSSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YG ISPWR S PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGKTISPWRRQGSDAPLVPGGSSGGSAAAVAAHLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I RTV+D AILL ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPD+E A+ + ++G+T+GIPKEYR++ + I + W QG WL++AGA I Sbjct: 240 RDTTSVDMPVPDFEAAISRGVKGLTIGIPKEYRVEGMPAEIQRLWDQGADWLREAGATIK 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHTQYALPAYYI++PAEASSNLARYDGVRYGLRV GKDI MYENTR+ GFG+EVK Sbjct: 300 EISLPHTQYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIAGMYENTRAAGFGREVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF A+ GVD ILTP TP++AF +G E Sbjct: 360 RRIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAAYAAGVDAILTPATPSAAFGIG-EM 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + NDVFTV VNMAGLP ISVPA L + +PLGLQLIG+PF EETLF+ Q I Sbjct: 419 ASADPVEMYLNDVFTVTVNMAGLPGISVPAGLDAQGLPLGLQLIGRPFDEETLFAAAQTI 478 Query: 481 EKEAGYFR-PHKWW 493 E AG P WW Sbjct: 479 ENAAGRITLPKAWW 492 >gi|163852738|ref|YP_001640781.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium extorquens PA1] gi|229485875|sp|A9W748|GATA_METEP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|163664343|gb|ABY31710.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium extorquens PA1] Length = 493 Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust. Identities = 307/494 (62%), Positives = 379/494 (76%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+RD L++KD SA E+ +++ AI+ + + +NAYI +A AE SD Sbjct: 1 MTALNELTLAEARDGLKAKDFSAREIAQAHLDAIDRAKA-LNAYIVATPDRALKMAEVSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G+AR LEG+P+GIKD FAT+G+ T A S IL+GF PHYES V+ +LW +GAVMLG Sbjct: 60 QKIAKGEARPLEGLPLGIKDLFATQGVDTTAGSKILEGFEPHYESNVSSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YG ISPWR S PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGKTISPWRRQGSYAPLVPGGSSGGSAAAVAAHLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I RTV+D AILL ++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPD+E A+ + ++G+T+GIPKEYR++ + I + W QG WL++AGA I Sbjct: 240 RDTTSVDMPVPDFEAAISRGVKGLTIGIPKEYRVEGMPAEIQRLWDQGADWLREAGATIK 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHTQYALPAYYI++PAEASSNLARYDGVRYGLRV GKDI MYENTR+ GFG+EVK Sbjct: 300 EISLPHTQYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIAGMYENTRAAGFGREVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y+RA+KIRTLIKRDF A+ GVD ILTP TP++AF +G E Sbjct: 360 RRIMIGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAAYASGVDAILTPATPSAAFGIG-EM 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + NDVFTV VNMAGLP ISVPA L + +PLGLQLIG+PF EETLF+ Q I Sbjct: 419 ASADPVEMYLNDVFTVTVNMAGLPGISVPAGLDAQGLPLGLQLIGRPFDEETLFAAAQTI 478 Query: 481 EKEAGYFR-PHKWW 493 E AG P WW Sbjct: 479 ENAAGRISLPKAWW 492 >gi|300022171|ref|YP_003754782.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Hyphomicrobium denitrificans ATCC 51888] gi|299523992|gb|ADJ22461.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 499 Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust. Identities = 306/499 (61%), Positives = 383/499 (76%), Gaps = 9/499 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L++K SA+EL D+++ AI+ +N +NAY+ + ARA A++SD Sbjct: 1 MTDLTKLTMAEARDGLKNKSFSALELTDAFLAAIDTANPAINAYVLQTPEHARAQAKDSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KRI G AR LEG+PIG KD F TKGI T ACS ILD F+P YESTV Q LWD GA+MLG Sbjct: 61 KRIAAGQARSLEGLPIGNKDLFCTKGIRTTACSKILDDFKPPYESTVGQNLWDAGAIMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMD-----STDKFTPGGSSGGSSAAVAGFLCAAS 175 KLN DEFAMGSSNETS +G V+SPWR S DK PGGSSGGSSAAVA LC A+ Sbjct: 121 KLNNDEFAMGSSNETSAFGNVVSPWRRKGADGKISDDKLVPGGSSGGSSAAVAADLCLAA 180 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 TDTGGSIRQPA+ TGTVG+KPTYGRCSR GI++FA SLDQAG I++TVRDSAI+L+A+ Sbjct: 181 TATDTGGSIRQPAALTGTVGMKPTYGRCSRWGIVAFASSLDQAGPISKTVRDSAIMLRAM 240 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 A +D D T V+ PVPDYE A+ + ++G+ +GIPKEYR+D +S I K W +GI+WLK A Sbjct: 241 ASHDPKDTTSVDAPVPDYEAAVGKGVKGLRIGIPKEYRVDGMSAEIQKLWDEGIAWLKAA 300 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA I EISLPHT+YALPAYYI++PAE SSNLARYDG+RYGLRV G ++ + YE TR+ GF Sbjct: 301 GATIHEISLPHTKYALPAYYIVAPAECSSNLARYDGMRYGLRVSGDNLTDTYEKTRAAGF 360 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+EV+ RI+IGTYVLS+ YD++YL+A+K+RTLIKRDF A+++ VDV+LTPTTP+ AF Sbjct: 361 GKEVRRRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDLAWDK-VDVVLTPTTPSPAFA 419 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G++ + +M D+FTV VNMAGLP +SVPA L + PLGLQLIG+PF EETLF Sbjct: 420 FGEKSGDPLAM--YLEDIFTVTVNMAGLPGMSVPAGLSSQGTPLGLQLIGKPFDEETLFR 477 Query: 476 VGQIIEKEAGYFR-PHKWW 493 Q+IE AG F P KWW Sbjct: 478 TAQVIEDSAGRFAVPAKWW 496 >gi|209884930|ref|YP_002288787.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oligotropha carboxidovorans OM5] gi|229485993|sp|B6JFW2|GATA_OLICO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|209873126|gb|ACI92922.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oligotropha carboxidovorans OM5] Length = 491 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 298/493 (60%), Positives = 381/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++++ L +K +A+EL D+++ A+E++ +NAY+ KARA A+E+D Sbjct: 1 MTDLTALTLADAKEGLAAKSFTALELTDAHLAAMESARV-LNAYVLETPDKARAMAKEAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+ +L GIP+GIKD FAT+ + ACS ILD F+P YEST+T +LW +GAV+LG Sbjct: 60 TRIAKGERSNLLGIPLGIKDLFATRDVRLTACSKILDDFKPPYESTITSQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +G VI+PWR S PGGSSGGS+AAVA LC + GTDT Sbjct: 120 KLNNDEFAMGSSNETSAFGNVINPWRREGSDTALVPGGSSGGSAAAVAAGLCLGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VGIKPTYGRCSR G+++FA SLDQAG RTVRDSAILL+++AG+D Sbjct: 180 GGSIRQPAAFTGIVGIKPTYGRCSRWGVVAFASSLDQAGPFARTVRDSAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE A+ +S++GM +GIP+EYR+ +S I+K W QG WLK AGA+IV Sbjct: 240 KDTTSVDRDVPDYEAAIGKSVKGMRIGIPREYRIGGMSSEIEKLWAQGAEWLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT+YALPAYY+++PAEASSNLARYDGVRYG RV GK I EMYENTR+ GFG EV+ Sbjct: 300 EISLPHTKYALPAYYVVAPAEASSNLARYDGVRYGARVNGKTIAEMYENTRAAGFGPEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF E F +G+D ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEEVFAKGIDAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PL LQLIG+PF EETLFS+G+ I Sbjct: 419 GKADPVEMYLNDIFTVTVNMAGLPGIAVPAGKDAQGLPLALQLIGRPFDEETLFSLGETI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 479 EQAAGRFEPKRWW 491 >gi|148256059|ref|YP_001240644.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bradyrhizobium sp. BTAi1] gi|166217645|sp|A5EKP4|GATA_BRASB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146408232|gb|ABQ36738.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] Length = 491 Score = 601 bits (1550), Expect = e-170, Method: Compositional matrix adjust. Identities = 297/493 (60%), Positives = 382/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R L SK +++EL D++++A+E + + +NA++ +ARA A E+D Sbjct: 1 MTDLTSLTLAEARKGLASKTFTSLELTDAHLKAMEEARA-LNAFVMETPDQARAMAREAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+A L GIP+GIKD FATK + T ACS IL F P YESTVT +LW +GAVMLG Sbjct: 60 ARIGKGEAGPLAGIPLGIKDLFATKDVRTTACSKILGNFVPTYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV +PWR S PGGSSGGS++AVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVGNPWRREGSNTTLVPGGSSGGSASAVAALLCMGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FT TVGIKPTYGRCSR GI++FA SLDQAG I R+ RD+AILL+++AG+D Sbjct: 180 GGSIRQPAAFTATVGIKPTYGRCSRWGIVAFASSLDQAGPIARSTRDAAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPDYE A+ +S++GM +GIP+EYRLD + I+K W G WLK AGA++V Sbjct: 240 KDTTSVDIPVPDYEAAIGRSVKGMKIGIPREYRLDGMPAEIEKLWSDGADWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GK I E+YENTR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVSGKSIGELYENTRAEGFGPEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+MIGTYVLS+ YD++Y+RA+K+RTLIKRDF + F +GV+ ILTP TP++AF +G E+ Sbjct: 360 RRVMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFEDCFAKGVNAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF EETLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGKDSQGLPLGLQLIGRPFDEETLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 479 EQAAGRFTPVRWW 491 >gi|27380200|ref|NP_771729.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bradyrhizobium japonicum USDA 110] gi|39931535|sp|Q89K29|GATA_BRAJA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|27353354|dbj|BAC50354.1| glutamyl-tRNA amidotransferase subunit A [Bradyrhizobium japonicum USDA 110] Length = 491 Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust. Identities = 294/493 (59%), Positives = 384/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R L +K +++EL D+++ AIE + +NA++ +AR A E+D Sbjct: 1 MTDLTSLTLAEARKGLAAKTFTSLELTDAHLSAIEAARV-LNAFVMETPDRARDMAREAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I GDA L GIP+G+ D FATKG+ T ACS IL F P YESTVT +LW +GAVMLG Sbjct: 60 GKIAKGDAGPLAGIPLGMTDLFATKGVRTTACSKILGNFVPTYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGS+NETS +GPV +PWR S PGGSSGGS++AVA LC + TDT Sbjct: 120 KLNNDEFAMGSANETSCFGPVGNPWRREGSNTTLVPGGSSGGSASAVAALLCMGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FT TVGIKPTYGRCSR GI++FA SLDQAG I R+VRDSA+LL+++AG+D Sbjct: 180 GGSIRQPAAFTATVGIKPTYGRCSRWGIVAFASSLDQAGPIARSVRDSAMLLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPDYE A+ +S++G+ +GIPKEYRLD + I+K W +G +WLK AGA++V Sbjct: 240 KDTTSVDIPVPDYEAAIGKSVKGIRIGIPKEYRLDGMPAEIEKLWSEGAAWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYGLR +GK+I+E+YENTR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLREQGKNIIELYENTRAEGFGAEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+MIGTYVLS+ YD++YLRA+K+RTLIK+DF + F +GV+ ILTP TP++AF +G E+ Sbjct: 360 RRVMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDCFAKGVNAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF EETLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGKDAQGLPLGLQLIGRPFDEETLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 479 EQAAGRFTPARWW 491 >gi|158424468|ref|YP_001525760.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Azorhizobium caulinodans ORS 571] gi|172047972|sp|A8I9X6|GATA_AZOC5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|158331357|dbj|BAF88842.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Azorhizobium caulinodans ORS 571] Length = 493 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 302/494 (61%), Positives = 379/494 (76%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+R+ L + + +AVEL SY+ A+ + + +NAY+ A KA A A ESD Sbjct: 1 MTALNQLTLTEAREGLATGEFTAVELTQSYLDAMAEART-LNAYVLETADKALAMAAESD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KRI +GDA LEG+PIG+KD F T G+ T A S IL F P YESTVT +LW +GAVMLG Sbjct: 60 KRIASGDAGKLEGLPIGVKDMFCTDGVRTTAGSKILGDFVPPYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS GPV+SPWR + PGGSSGGS+AAVA FLCA + GTDT Sbjct: 120 KLNNDEFAMGSSNETSAQGPVVSPWRREGDSAPLVPGGSSGGSAAAVAAFLCAGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG RTV D+A+LL+++AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRFGIIAYASSLDQAGPFARTVNDAAVLLRSMAGYDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VN VPDYE A+ SI+G +GIP+EYR++ L P I W++G WL+DAGA++V Sbjct: 240 KDSTSVNRSVPDYEDAVGASIKGKRIGIPREYRVEGLDPEIAGMWEEGAQWLRDAGAEVV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALP YYI++PAEASSNLARYDGVRYG RV G+DI++MYE TR+ GFG EV+ Sbjct: 300 DISLPHTKYALPTYYIVAPAEASSNLARYDGVRYGTRVPGRDIIDMYERTRAAGFGPEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y++A+K+RTLIKRDF + F QGVD +LTP TP+ AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYVKAQKVRTLIKRDFDDVFAQGVDAVLTPATPSPAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + D+FTV VN+AGLP ISVPA L K +PLGLQLIG+PF EETLFS+ Q++ Sbjct: 419 GSADPVEMYLQDIFTVTVNLAGLPGISVPAGLSCKNLPLGLQLIGRPFEEETLFSLAQVV 478 Query: 481 EKEAGYFRPHK-WW 493 E+ AG F WW Sbjct: 479 EEAAGRFPVDDLWW 492 >gi|170746913|ref|YP_001753173.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium radiotolerans JCM 2831] gi|170653435|gb|ACB22490.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacterium radiotolerans JCM 2831] Length = 492 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 306/490 (62%), Positives = 371/490 (75%), Gaps = 3/490 (0%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N + ++E+RD L++K ISA EL +++ A+ + +NAYI +A AE SD++I Sbjct: 4 NELTLAEARDALKAKRISARELTQAHLDAMAQARV-LNAYIRETPDRALTMAEASDRKIA 62 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 +G+AR LEGIP+GIKD F T G+ T A S IL+ F PHYES V+ LW +GAVMLGKLN+ Sbjct: 63 SGEARPLEGIPLGIKDLFCTHGVTTTAGSKILETFEPHYESAVSANLWRDGAVMLGKLNL 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNETS YG VISPWR S PGGSSGGS+AAVA LC + TDTGGSI Sbjct: 123 DEFAMGSSNETSAYGNVISPWRRAGSDAPIVPGGSSGGSAAAVAARLCLGATATDTGGSI 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I RTVRD AILL ++AG D D T Sbjct: 183 RQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARTVRDCAILLGSMAGSDARDTT 242 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 C +L VPD+E A+ + ++G+T+GIPKEYR+D + I K W +G +WLK AGA I EISL Sbjct: 243 CADLAVPDFEAAVSRGVKGLTIGIPKEYRVDGMPAEIQKLWDEGAAWLKAAGATIKEISL 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PHT YALPAYYI++PAEASSNLARYDGVRYGLRV GKDI MYENTR+ GFG+EVK RIM Sbjct: 303 PHTSYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIAGMYENTRAAGFGREVKRRIM 362 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTYVLS+ YD++Y+RA+KIRTLIKRDF A+ GVD ILTP TP++AF +G E+ ++ Sbjct: 363 IGTYVLSAGYYDAYYVRAQKIRTLIKRDFEAAYASGVDAILTPATPSAAFGIG-EKASAD 421 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + NDVFTV VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF+V Q+IE A Sbjct: 422 PVEMYLNDVFTVTVNMAGLPGIAVPAGLDGQGLPLGLQLIGRPFDEETLFAVAQVIEDSA 481 Query: 485 GY-FRPHKWW 493 G P WW Sbjct: 482 GRTVLPEPWW 491 >gi|312114339|ref|YP_004011935.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Rhodomicrobium vannielii ATCC 17100] gi|311219468|gb|ADP70836.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodomicrobium vannielii ATCC 17100] Length = 527 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 297/493 (60%), Positives = 380/493 (77%), Gaps = 5/493 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + +S++RD+LR+K+I+A EL ++ + AIE N + AY+ V A KA A++SD+R+ Sbjct: 7 LNELTLSDARDKLRAKEITATELTEACLSAIEAGNDALKAYLVVTADKALEQAKKSDERL 66 Query: 64 ING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 DAR LEGIP+GIKD F T G+ T A SHIL F P YESTVTQ LWD GAVMLGK Sbjct: 67 AANAKDARALEGIPLGIKDLFCTDGVRTTAGSHILGNFEPPYESTVTQNLWDAGAVMLGK 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS ETSYYG ++PWR+ DS + PGGSSGGSS+AVA LC + +DTG Sbjct: 127 LNMDEFAMGSSTETSYYGQTVNPWRAKDSDENLVPGGSSGGSSSAVAAGLCLGATASDTG 186 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG ITR+++D+A++L+A+A YD Sbjct: 187 GSIRQPAAFTGTVGIKPTYGRCSRYGMVAFASSLDQAGPITRSIKDAALMLQAMASYDLK 246 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V+ P+PD E+AL Q +G+ +G+PKEYR+D +S I+ W++GI + AGA+IV+ Sbjct: 247 DSTSVDRPLPDLEKALTQKFKGLKIGVPKEYRVDGMSKEIEALWEKGIDIYRQAGAEIVD 306 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ISLPHT+ ALPAYYI++PAEASSNLARYDGVRYGLR +G+DI++MYE TRS GFG EVK Sbjct: 307 ISLPHTKAALPAYYIVAPAEASSNLARYDGVRYGLRADGRDIVDMYEETRSHGFGAEVKR 366 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI+IGTYVLS+ YD++YL+A+K+R+LIKRDF +AFE VDV+LTPTTPT AF LG ++ Sbjct: 367 RILIGTYVLSAGYYDAYYLKAQKVRSLIKRDFDDAFET-VDVVLTPTTPTPAFGLGSKK- 424 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + ND+FTV VNMAGLP +SVP L + +PLGLQLIG+PF E T+ GQ+IE Sbjct: 425 DADPVEMYLNDIFTVTVNMAGLPGLSVPGGLSAEGLPLGLQLIGKPFDEATVLRAGQVIE 484 Query: 482 KEAGYFR-PHKWW 493 G P WW Sbjct: 485 DAVGRMPIPGAWW 497 >gi|90423767|ref|YP_532137.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodopseudomonas palustris BisB18] gi|109891979|sp|Q215W8|GATA_RHOPB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|90105781|gb|ABD87818.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodopseudomonas palustris BisB18] Length = 492 Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust. Identities = 300/493 (60%), Positives = 381/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L +K S+++L D+++ AIE + +NA++ +AR+ A+ +D Sbjct: 1 MTDLTSLTLAEARDGLAAKSFSSLQLTDAHLAAIEAARV-LNAFVLETPDQARSMAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+ LEG+P+GIKD FAT G+ T ACS ILD F P YESTVT +LW +GAV+LG Sbjct: 60 AKIAKGEGGPLEGLPLGIKDLFATSGVRTTACSKILDDFTPPYESTVTSQLWRDGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS++AVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVVNPWRREGSDAKLVPGGSSGGSASAVAAGLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG I RTVRDSAILL+++AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDSAILLRSMAGYDA 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE A+ +S++GM +GIPKEYR+ + I+ W+QG WLK AGA++V Sbjct: 240 KDTTSVDRAVPDYEAAVGRSVKGMKIGIPKEYRIGGMPAEIEALWKQGADWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG RV G++I EMYENTR+ GFG EV Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARVNGRNITEMYENTRAQGFGAEVI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIKRDF E F +GV ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDFEECFAKGVSAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF EETLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGRDSQGLPLGLQLIGRPFDEETLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F KWW Sbjct: 479 EQAAGRFTAAKWW 491 >gi|75676191|ref|YP_318612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrobacter winogradskyi Nb-255] gi|109891963|sp|Q3SR31|GATA_NITWN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|74421061|gb|ABA05260.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nitrobacter winogradskyi Nb-255] Length = 491 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 290/493 (58%), Positives = 378/493 (76%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L K +A+EL D+++ A+E + +NAY+ ++AR A ++D Sbjct: 1 MTDLTSLTLAEARDGLARKSFTALELTDAHLAAMERARV-LNAYVLETPERAREMARQAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI + L G+P+G+KD FAT+G T ACS IL F+P YESTVT +LW +GAVMLG Sbjct: 60 GRIAKSEGGPLNGLPLGVKDLFATEGTRTTACSRILGDFKPPYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPVI+PWR S + PGGSSGGS++AVA +C + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVINPWRRQGSDVRLVPGGSSGGSASAVAAGICLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVG+KPTYGRCSR G ++FA SLDQAG I RTVRD+AILL+++AG+D Sbjct: 180 GGSIRQPAAFTGTVGLKPTYGRCSRWGTVAFASSLDQAGPIARTVRDAAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE A+ +S++GM +G+P+EYRLD + I+K W QG WLK AGA++V Sbjct: 240 KDTTSVDRAVPDYEAAVGRSVKGMKIGLPREYRLDGMPAEIEKLWSQGADWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG R +G +I+EMYENTR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARADGSNIVEMYENTRAKGFGAEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + +E GVD ILTP TP++AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDCYEAGVDAILTPATPSAAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +S + ND+FTV NMAGLP I+VPA + +PLGLQLIG+PF EE + S+G++I Sbjct: 419 TDSDPIEMYLNDIFTVTANMAGLPGIAVPAGRDAQGLPLGLQLIGRPFDEEAVISLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P WW Sbjct: 479 EQAAGRFTPEVWW 491 >gi|85716412|ref|ZP_01047384.1| glutamyl-tRNA amidotransferase subunit A [Nitrobacter sp. Nb-311A] gi|85696769|gb|EAQ34655.1| glutamyl-tRNA amidotransferase subunit A [Nitrobacter sp. Nb-311A] Length = 492 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 292/495 (58%), Positives = 382/495 (77%), Gaps = 5/495 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + ++E+RD L K +++EL D+++ A+E + +NAY+ ++AR A ++D Sbjct: 1 MTNLTSLTLAEARDGLARKSFTSLELADAHLAAMERARV-LNAYVLETPERAREMARQAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD-NGAVML 119 +RI G+ L G+P+G+KD FAT+G T ACS ILD F+P YESTVT +L+ +GAVML Sbjct: 60 ERIAKGEGGPLNGLPLGVKDLFATEGTRTTACSRILDDFKPPYESTVTSQLFTRDGAVML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN DEFAMGSSNETS +GPV++PWR S K PGGSSGGS++AVA LC + TD Sbjct: 120 GKLNNDEFAMGSSNETSCFGPVVNPWRRQGSDVKLVPGGSSGGSASAVAAGLCLGATATD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTGTVG+KPTYGRCSR GI++FA SLDQAG ITRTVRD+AIL++++AG+D Sbjct: 180 TGGSIRQPAAFTGTVGLKPTYGRCSRWGIVAFASSLDQAGPITRTVRDAAILMRSMAGHD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T V+ VPDYE A+ +S++GM +G+P+EYRL+ + I+K W QG WLK AGA++ Sbjct: 240 PRDTTSVDRAVPDYEAAVGKSVKGMKIGLPREYRLEGMPAEIEKLWSQGAEWLKAAGAEL 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE+SLPHT+YALPAYYI++PAEASSNLARYDGVRYG R G +I+EMYENTR+ GFG EV Sbjct: 300 VEVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGARAGGSNIVEMYENTRAKGFGAEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIMIGTYVLS+ YD++YLRA+K+RTLIK+DF + ++ GVD ILTP TP++AF +G++ Sbjct: 360 RRRIMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEDCYDAGVDAILTPATPSAAFGIGQK 419 Query: 420 ENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 G+ +Y ND+FTV NMAGLP I+VPA + +PLGLQLIG+PF EETL S+G+ Sbjct: 420 VG--GNPIEMYLNDIFTVTANMAGLPGIAVPAGKDSQGLPLGLQLIGRPFDEETLISLGE 477 Query: 479 IIEKEAGYFRPHKWW 493 +IE AG F P WW Sbjct: 478 VIELAAGRFTPEVWW 492 >gi|323136213|ref|ZP_08071295.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylocystis sp. ATCC 49242] gi|322398287|gb|EFY00807.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylocystis sp. ATCC 49242] Length = 496 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 298/495 (60%), Positives = 377/495 (76%), Gaps = 4/495 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L ++++++RD L++K +SAVEL +++ AIE + + +N YI + A AE SD Sbjct: 1 MSDLTHLSLADARDALKTKKLSAVELTKAHVAAIEKARA-LNCYITETPELALRQAETSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ LEG+P+GIKD + +KG+ T A S IL F P YESTV+ L +GAV LG Sbjct: 60 AKLARGEGGPLEGVPLGIKDLYCSKGVRTTAASRILGNFTPTYESTVSANLLRDGAVTLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN+DEFAMGSSNETS +GPVISPWR D + K PGGSSGGSSAAVA LC + TD Sbjct: 120 KLNLDEFAMGSSNETSAFGPVISPWRRGGDPSAKIVPGGSSGGSSAAVAARLCMGATATD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG ITRTVRD++I+L+++AG+D Sbjct: 180 TGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPITRTVRDASIMLRSMAGHD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T V+ PVPDYE A+ S++G +G+PKEYRLD +S I W +G++WLKDAGA+I Sbjct: 240 PKDTTSVDAPVPDYEAAIGASVKGRRIGVPKEYRLDGMSAEIAAFWDRGVAWLKDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VEISLPHT+YALP YYII+PAEASSNLARYDGVRYGLR +G+DI++MYE TR+ GFG EV Sbjct: 300 VEISLPHTKYALPTYYIIAPAEASSNLARYDGVRYGLREQGRDIIDMYEKTRAKGFGAEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIMIGTYVLS+ YD++Y+RA+K+R+LIKRDF +AF GVD +LTP TP++AF G E Sbjct: 360 RRRIMIGTYVLSAGYYDAYYVRAQKVRSLIKRDFDQAFAAGVDAVLTPATPSTAFAQG-E 418 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + +S + NDVFTV VNMAGLP I+VP L +PLGLQLIG+PF EETLFS+ Sbjct: 419 QGSSDPVEMYLNDVFTVTVNMAGLPGIAVPGGLAANGLPLGLQLIGRPFDEETLFSLASA 478 Query: 480 IEKEAGYFR-PHKWW 493 IE+ A P WW Sbjct: 479 IEQAAPKIEFPQPWW 493 >gi|146341399|ref|YP_001206447.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bradyrhizobium sp. ORS278] gi|166217646|sp|A4YWF1|GATA_BRASO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146194205|emb|CAL78227.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Bradyrhizobium sp. ORS278] Length = 491 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 297/493 (60%), Positives = 381/493 (77%), Gaps = 2/493 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+R L K +++EL D++++AIE + + +NA++ +ARA A ++D Sbjct: 1 MTDLTSLTLAEARKGLADKTFTSLELTDAHLKAIEAARA-LNAFVMETPDQARAMARDAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+ L GIP+GIKD FATK + T ACS IL F P YESTVT +LW +GAVMLG Sbjct: 60 ARIGKGEGGPLAGIPLGIKDLFATKDVRTTACSKILGNFVPTYESTVTAQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS +GPV +PWR S PGGSSGGS++AVA LC + TDT Sbjct: 120 KLNNDEFAMGSSNETSCFGPVGNPWRREGSNTTLVPGGSSGGSASAVAALLCMGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FT TVGIKPTYGRCSR GI++FA SLDQAG I RT RD+AILL+++AG+D Sbjct: 180 GGSIRQPAAFTATVGIKPTYGRCSRWGIVAFASSLDQAGPIARTTRDAAILLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V++PVPDYE A+ +S++GM +GIPKEYRLD + I+K W +G +WLK AGA++V Sbjct: 240 KDTTSVDIPVPDYEAAIGKSVKGMKIGIPKEYRLDGMPAEIEKLWSEGAAWLKAAGAELV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYI++PAEASSNLARYDGVRYGLRV GK I E+YENTR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKSIGELYENTRAEGFGAEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+MIGTYVLS+ YD++Y+RA+K+RTLIKRDF + F +GV ILTP TP++AF +G E+ Sbjct: 360 RRVMIGTYVLSAGYYDAYYIRAQKVRTLIKRDFEDCFAKGVSAILTPATPSAAFGVG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ND+FTV VNMAGLP I+VPA + +PLGLQLIG+PF EETLFS+G++I Sbjct: 419 GGADPVEMYLNDIFTVTVNMAGLPGIAVPAGKDSQGLPLGLQLIGRPFDEETLFSLGEVI 478 Query: 481 EKEAGYFRPHKWW 493 E+ AG F P +WW Sbjct: 479 EQAAGRFTPVRWW 491 >gi|154253283|ref|YP_001414107.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Parvibaculum lavamentivorans DS-1] gi|171769657|sp|A7HX17|GATA_PARL1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|154157233|gb|ABS64450.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Parvibaculum lavamentivorans DS-1] Length = 492 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 293/494 (59%), Positives = 377/494 (76%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++ +RD L+ K+I++ EL +Y++ +E + + +NAY+ V A KA A+ SD Sbjct: 1 MSDLTKLTLAGARDALKKKEITSTELTGAYLKEMEAA-AALNAYVTVTADKAMEMAKASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ LEG+P+GIKD + TK + T ACSHILDGF+P YESTVT LW +GAVMLG Sbjct: 60 AKLAKGEGGALEGLPLGIKDLYCTKDVLTTACSHILDGFKPAYESTVTSNLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS+YG V++PWR S K PGGSSGGSSAAVA LC A+ TDT Sbjct: 120 KLNNDEFAMGSSNETSHYGSVVNPWRRKGSDAKLVPGGSSGGSSAAVAANLCLAATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVG+KPTYGRCSR GI++FA SLDQAG I R VRD+AI+L ++AG+DE Sbjct: 180 GGSIRQPAAFTGTVGLKPTYGRCSRWGIVAFASSLDQAGPIGRDVRDTAIMLGSMAGHDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ VPDYE L QSI+G++VGIPKEYR+D + ID+ W +GI WLK AGA + Sbjct: 240 KDTTSVDRAVPDYEAVLGQSIKGLSVGIPKEYRVDGMPGEIDELWSRGIEWLKAAGATVK 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALP YYI++PAE SSNLARYDGVRYGLRV+G+DI +MYE TR+ GFG EV+ Sbjct: 300 EVSLPHTKYALPTYYIVAPAECSSNLARYDGVRYGLRVDGRDITDMYEKTRAAGFGAEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+++GTYVLS+ YD++YL+A+K+R+LI +DF AF + VDV+LTPT P++AF +G++ Sbjct: 360 RRVLMGTYVLSAGYYDAYYLKAQKVRSLIAQDFASAFSE-VDVLLTPTAPSAAFAIGEKS 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM NDVFTV VN+AGLP ISVPA L + +PLGLQLIG+ F EETL I Sbjct: 419 DDPLSM--YLNDVFTVPVNLAGLPGISVPAGLSGEGLPLGLQLIGRTFDEETLLKAAYAI 476 Query: 481 EKEAGY-FRPHKWW 493 E+ A + P WW Sbjct: 477 EQAADFKAAPEAWW 490 >gi|306841759|ref|ZP_07474445.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella sp. BO2] gi|306288164|gb|EFM59551.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Brucella sp. BO2] Length = 416 Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust. Identities = 283/416 (68%), Positives = 338/416 (81%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD FATKG+HTQACSHILDGF+P YESTVT LW +GAVMLGKLNMDEFAMGSSNETSY Sbjct: 1 MKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSY 60 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YGPV +PWR+ S PGGSSGGS+AAVA LCA + TDTGGSIRQPA+FTGTVGIK Sbjct: 61 YGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIK 120 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYGR SR G ++FA SLDQAG I R VRD+AIL+K++A D D T V+LPVPDYE AL Sbjct: 121 PTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDLKDTTSVDLPVPDYEAAL 180 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 +S++GM +GIP+EYR+D + I++ WQ+GI +LKDAGA+IV+ISLPHT+YALPAYYI+ Sbjct: 181 GRSVKGMKIGIPREYRVDGMPGEIEELWQKGIQYLKDAGAEIVDISLPHTKYALPAYYIV 240 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 +PAEASSNLARYDGVRYGLRV GKDI +MYE TR+ GFG+EVK RIMIGTYVLS+ YD+ Sbjct: 241 APAEASSNLARYDGVRYGLRVPGKDIADMYEQTRAAGFGKEVKRRIMIGTYVLSAGYYDA 300 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +YLRA+K+RTLIK+DF + F +GVD ILTP TP++AF L E+ + + ND+FTV Sbjct: 301 YYLRAQKVRTLIKKDFEDVFAKGVDAILTPATPSAAFGLADEDLANDPVKMYLNDIFTVT 360 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 VNMAGLP I+VPA L + +PLGLQLIG+PF EETLF +IE+ AG F P KWW Sbjct: 361 VNMAGLPGIAVPAGLNGQGLPLGLQLIGRPFEEETLFQAAHVIEQAAGRFTPAKWW 416 >gi|83955339|ref|ZP_00963994.1| glutamyl-tRNA amidotransferase subunit A [Sulfitobacter sp. NAS-14.1] gi|83840332|gb|EAP79506.1| glutamyl-tRNA amidotransferase subunit A [Sulfitobacter sp. NAS-14.1] Length = 495 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 291/497 (58%), Positives = 373/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++LN + ++++RD LR D+++ EL + + AIE + + +NA++ A A+ +D Sbjct: 1 MADLNKLGLADARDALRKGDVTSAELTAACLSAIEGAGA-LNAFVHHTGDLAMDQAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI +GDA + G+PIGIKD F TKG+ +QA S IL+GF P YESTV+Q L D+GA+MLG Sbjct: 60 ARIKSGDAPAMCGLPIGIKDLFCTKGVPSQAASRILEGFLPEYESTVSQNLLDSGAIMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWRRSGDETALTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG +T+TVRD+AI+L A+AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPMTKTVRDAAIMLGAMAGYDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T L VPD+E AL I+G +GIP+EYR+D + IDK WQ GI+ L+DAGA+IV Sbjct: 240 KDSTSAELAVPDFEAALTGDIRGKKIGIPREYRIDGIPAEIDKLWQDGIAMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLDHGDGITEMYEKTRAEGFGA 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF +AF G+D ILTPTTP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDAFAAGIDSILTPTTPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I++P E +PLGLQLIG+P+ E L S Sbjct: 420 -EMTDTDPVAMYLNDVFTVTVNLAGLPGIALPTGTSETGLPLGLQLIGRPWEEADLLSTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALEQAAGFVAKPQKWW 495 >gi|83944519|ref|ZP_00956971.1| glutamyl-tRNA amidotransferase subunit A [Sulfitobacter sp. EE-36] gi|83844625|gb|EAP82510.1| glutamyl-tRNA amidotransferase subunit A [Sulfitobacter sp. EE-36] Length = 495 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 291/497 (58%), Positives = 373/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++LN + ++++RD LR D+++ EL + + AIE + + +NA++ A A +D Sbjct: 1 MADLNKLGLADARDALRKGDVTSAELTAACLSAIEGAGA-LNAFVHHTGDLAMDQANAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI +G+A + G+PIGIKD F TKG+ +QA S IL+GF P YESTV+Q L D+GAVMLG Sbjct: 60 ARIKSGEAPAMCGLPIGIKDLFCTKGVPSQAASRILEGFLPEYESTVSQNLLDSGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWRRSGDETALTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG +T+TVRD+AI+L A+AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPMTKTVRDAAIMLGAMAGYDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T L VPD+E AL I+G +GIP+EYR+D + IDK WQ GI+ L+DAGA+IV Sbjct: 240 KDSTSAELAVPDFEAALTGDIRGKKIGIPREYRIDGIPAEIDKLWQDGIAMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLDHGDGITEMYEKTRAEGFGA 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF +AF G+D ILTPTTP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDAFAAGIDSILTPTTPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I++P E +PLGLQLIG+P++E L S Sbjct: 420 -EMTDTDPVAMYLNDVFTVTVNLAGLPGIALPTGTSETGLPLGLQLIGRPWQEADLLSTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALEQAAGFVAKPQKWW 495 >gi|296445895|ref|ZP_06887846.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylosinus trichosporium OB3b] gi|296256563|gb|EFH03639.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylosinus trichosporium OB3b] Length = 499 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 302/498 (60%), Positives = 374/498 (75%), Gaps = 8/498 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+ ++++E+RD L SK +SAVEL +++ AI + S +NAYI + A AAA+ESD Sbjct: 1 MSDPTHLSLAEARDALVSKKLSAVELTRAHVDAIAEA-SALNAYITTTPELALAAAQESD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+AR LEG+P+GIKD + TKG+ T A S ILD F P YESTV+ LW +GA+MLG Sbjct: 60 ARLSRGEARPLEGLPLGIKDLYCTKGVRTTAGSRILDDFTPTYESTVSANLWRDGALMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSM--DSTD--KFTPGGSSGGSSAAVAGFLCAASI 176 KLN+DEFAMGSSNETS +GPV+SPWR D+ D K PGGSSGGSSAAVA L + Sbjct: 120 KLNLDEFAMGSSNETSAFGPVVSPWRRKKGDAFDDAKIVPGGSSGGSSAAVAARLALGAT 179 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 TDTGGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG ITRTVRD+AI+L+++A Sbjct: 180 ATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPITRTVRDAAIMLRSMA 239 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G+D D T V+ PVPDYE A+ S++G +GIPKEYR+ I+ W + +WL+DAG Sbjct: 240 GHDPKDTTSVDTPVPDYEAAIGASVKGRRIGIPKEYRIGG-GAEINALWDEAAAWLRDAG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A+IVEISLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR +G DI++MYE TR+ GFG Sbjct: 299 AEIVEISLPHTRYALPAYYIIAPAEASSNLARYDGVRYGLREKGSDIVDMYEKTRAAGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EV+ R+MIGTYVLS YD++Y+RA+KIR+LIKRDF E F GVD +LTP TP++AF Sbjct: 359 SEVRRRVMIGTYVLSHGYYDAYYVRAQKIRSLIKRDFDEVFAAGVDAVLTPATPSTAFAQ 418 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G E+ + + NDVFTV VNMAGLP I+VP L +PLGLQLIG+PF E TLFS+ Sbjct: 419 G-EKGAADPVEMYLNDVFTVTVNMAGLPGIAVPGGLGADGLPLGLQLIGRPFDEATLFSL 477 Query: 477 GQIIEKEAGYFR-PHKWW 493 +E A P WW Sbjct: 478 AAALESAAPSIDFPQPWW 495 >gi|149914087|ref|ZP_01902619.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. AzwK-3b] gi|149812371|gb|EDM72202.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. AzwK-3b] Length = 493 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 294/497 (59%), Positives = 375/497 (75%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + ++E+RD LR D++++EL ++ + IE + S +NA++ ++ AR A +D Sbjct: 1 MTELNKLTIAEARDALRKGDVTSLELTEACLTEIEGA-SALNAFVHDTSELAREQAGAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA L GIP+GIKD F T+G+ +QA S IL+GFRP YESTVTQ L+D GAVMLG Sbjct: 60 ARIKAGDAPSLCGIPLGIKDLFCTRGVPSQAASGILEGFRPEYESTVTQNLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PW+ D + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWKVDDR--QLTPGGSSGGSAAAVAADLCLAATGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+TVRDSAI+L+ + G+D Sbjct: 178 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKTVRDSAIMLQTMCGHDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T ++PVPD+E L I+G +GIP+EYR+D + I+K W G + LKDAGA+I Sbjct: 238 KDSTSADIPVPDFEAMLTGDIKGKVIGIPREYRMDGMPAEIEKLWADGSAMLKDAGAEIR 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYG--LRVEGKD-ILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R+E D I EMYE TR+ GFG Sbjct: 298 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRARLEQCDGITEMYEKTRAEGFGD 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R+M+GTYVLS+ YD++Y RARK+RTLIKRDF + F+ GVD ILTP TP++AF LG Sbjct: 358 EVKRRVMVGTYVLSAGFYDAYYNRARKVRTLIKRDFEQVFDAGVDAILTPATPSAAFGLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N+ + NDVFTV VN+AGLP I+VPA + K +PLGLQLIG+P+ E L + Sbjct: 418 -EMANADPVQMYLNDVFTVTVNLAGLPGIAVPAGIDGKGLPLGLQLIGRPWEEGDLLNTA 476 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 477 YALEQAAGFVAKPEKWW 493 >gi|149201747|ref|ZP_01878721.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius sp. TM1035] gi|149144795|gb|EDM32824.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius sp. TM1035] Length = 495 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 286/497 (57%), Positives = 369/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++LN M ++E+RD LR D++++EL ++ + A++ + + +NA++ + ARA A+ +D Sbjct: 1 MTDLNRMTIAEARDALRKGDVTSLELTEACLAAVDGAGA-LNAFVHHTPEVARAQAQAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + GIP+GIKD F TKG+ +QA S IL GF+P YESTVTQ L+D GAVMLG Sbjct: 60 TRIAKGDAPAMCGIPLGIKDLFCTKGVPSQAASRILQGFKPEYESTVTQNLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS++AVA LC + GTDT Sbjct: 120 KLNMDEFAMGSSNETSCYGNAVNPWRRGNDETALTPGGSSGGSASAVAADLCLGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+TVRDSAI+L A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKTVRDSAIMLGAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVPD+E L I+G +GIP+EYR+D + I+K W G L+ AGA+I Sbjct: 240 KDSTSADLPVPDFEALLTGDIRGKVIGIPREYRMDGMPAEIEKLWSDGAEMLRAAGAEIR 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLAQGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RAR++R LIKRDF EAF GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARRVRALIKRDFDEAFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP ++VP L K +PLGLQLIG+P+ E L + Sbjct: 420 -EMTDADPVQMYLNDVFTVTVNLAGLPGVAVPTGLDGKGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALEQAAGFVAKPAKWW 495 >gi|254486737|ref|ZP_05099942.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseobacter sp. GAI101] gi|214043606|gb|EEB84244.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseobacter sp. GAI101] Length = 495 Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust. Identities = 289/497 (58%), Positives = 371/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++LN ++++E+RD LR D+S+ EL + + IE + + +NA++ A A+ +D Sbjct: 1 MADLNKLSLAEARDALRKGDVSSAELTGACLTEIEGAGA-LNAFVHHTGDLAMDQAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI GDA + G+PIGIKD F TK + +QA S IL+GF P YESTV+Q L+D GAVMLG Sbjct: 60 ERIKAGDAPAMCGLPIGIKDLFCTKNVPSQAGSRILEGFLPQYESTVSQNLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWRRAGDDAQLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG +T+TVRD+AI+L A+AGYD Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPMTKTVRDAAIMLGAMAGYDA 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIP+EYR+D + I+ WQ GI+ ++DAGA+IV Sbjct: 240 KDSTSADLAVPDFEAALTGDIRGKKIGIPREYRMDGMPEEINTLWQDGIAMMRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLDHGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RARK+RTLIK+DF + F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMIGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFASGVDSILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I++P + +PLGLQLIG+P+ E L S Sbjct: 420 -EMTDADPVAMYLNDVFTVTVNLAGLPGIALPTGTNAQGLPLGLQLIGRPWEEADLLSTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +EK AG+ +P KWW Sbjct: 479 YALEKAAGFVAKPAKWW 495 >gi|310816862|ref|YP_003964826.1| glutamyl-tRNA amidotransferase subunit A [Ketogulonicigenium vulgare Y25] gi|308755597|gb|ADO43526.1| glutamyl-tRNA amidotransferase subunit A [Ketogulonicigenium vulgare Y25] Length = 494 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 296/497 (59%), Positives = 378/497 (76%), Gaps = 7/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ + ++ +RD LR ++++ EL DSYI AIE +++ +NAY+ ARA A+ +D Sbjct: 1 MTDISKLTIATARDLLRKGELTSRELTDSYISAIEGADA-LNAYVHKTPDIARAQADAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ GDA D+ GIP+GIKD FATKG+ +QA S IL GF+P YESTVT KL+ +GAVMLG Sbjct: 60 ARLKAGDAPDMCGIPLGIKDLFATKGVASQAASGILAGFKPEYESTVTSKLFGDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS+NE+S YGP ++PWR+ S TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSANESSVYGPAVNPWRAAGSDAALTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGR SR GII++A SLDQAG +T+ VRD+AI+L A++G D Sbjct: 180 GGSIRQPAAFTGVTGIKPTYGRVSRWGIIAYASSLDQAGPMTKDVRDAAIMLTAMSGTDS 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G T+GIP+EYR+D LSP I K W GI+ LKDAGAKIV Sbjct: 240 KDSTSADLAVPDFEAALTGDIRGKTIGIPREYRIDGLSPEIAKLWDDGIAMLKDAGAKIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAQLSAGDGINEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RIMIGTYVLS+ YD++Y RAR++RTL+K+DF +AF GVD ILTP TP+SAF LG Sbjct: 360 EVQRRIMIGTYVLSAGFYDAYYNRARRVRTLVKQDFEQAFAAGVDAILTPATPSSAFALG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFT+ VN+AGLP ISVPA K +PLGLQLIG+P+ E L ++ Sbjct: 420 MESAD--PVQAYLNDVFTITVNLAGLPGISVPAGQDSKGLPLGLQLIGKPWEEGDLLNIA 477 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P +WW Sbjct: 478 YSLERAAGFVAKPARWW 494 >gi|126728942|ref|ZP_01744757.1| glutamyl-tRNA amidotransferase subunit A [Sagittula stellata E-37] gi|126710872|gb|EBA09923.1| glutamyl-tRNA amidotransferase subunit A [Sagittula stellata E-37] Length = 495 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 290/497 (58%), Positives = 371/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+RD LRS D+++ EL D+ + AI+N+++ +NA++ AR A +D Sbjct: 1 MSELTKLKIAEARDALRSGDVTSAELTDACLAAIDNADA-LNAFVHKTPDIAREQAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ GDA DL GIP+GIKD F TKG+ +QA S IL+GFRP YESTVT KL++ G+VMLG Sbjct: 60 ARLKTGDAPDLCGIPLGIKDLFCTKGVASQAASRILEGFRPEYESTVTTKLFEAGSVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS+AAVA LC + GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWRRGNDDAHLTPGGSSGGSAAAVAADLCLGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + + VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMAKDVRDAAIMLQAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVPD+E L I+G +GIPKEY +D + ID W G L+DAGA+IV Sbjct: 240 KDSTSADLPVPDFESMLTGDIKGKKIGIPKEYHMDGMPAEIDALWASGRDMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYENTR+ GFG+ Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLSQGDGITEMYENTRAEGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R+M+GTYVLS+ YD++Y RARK+RTLIK+DF +AF G+D ILTP TP++AF LG Sbjct: 360 EVKRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDAFHAGIDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP +SVPA L + +PLGLQLIG+P+ E L + Sbjct: 420 -EMVEADPVAMYLNDVFTVTVNLAGLPGVSVPAGLNGQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P +WW Sbjct: 479 YALERAAGFVSKPVQWW 495 >gi|83949858|ref|ZP_00958591.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius nubinhibens ISM] gi|83837757|gb|EAP77053.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius nubinhibens ISM] Length = 495 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 291/497 (58%), Positives = 374/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + ++E+RDRLR D+++VEL D+ + AIE + + +NA++ + AR A +D Sbjct: 1 MTELNELTIAEARDRLRKGDVTSVELTDACLSAIEGAGA-LNAFVHNTPEIAREQAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + GIP+GIKD F TKG+ +QA S IL+GF P YESTV+QKL+D G+VMLG Sbjct: 60 ARIAKGDAPAMCGIPLGIKDLFCTKGVPSQAASGILEGFTPEYESTVSQKLFDAGSVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWRRGNDETALTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T++VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKSVRDAAIMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G T+GIP+EYR+D + I+ WQ+GI+ ++DAGAKIV Sbjct: 240 KDSTSADLAVPDFEAALTGDIRGKTIGIPREYRMDGMPEEIEALWQEGIAKMRDAGAKIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALP YY+I+PAEASSNLARYDGVRYG R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPTYYVIAPAEASSNLARYDGVRYGHRAKLEAGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+R LIKRDF + F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRALIKRDFEQVFADGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N+ + NDVFTV VN+AGLP ISVP + + +PLGLQLIG+P+ E L + Sbjct: 420 -EMKNADPVQMYLNDVFTVTVNLAGLPGISVPGGMDRQGLPLGLQLIGKPWEEGELLNCA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ G+ +P KWW Sbjct: 479 YALEQATGFVEKPGKWW 495 >gi|114764627|ref|ZP_01443831.1| glutamyl-tRNA amidotransferase subunit A [Pelagibaca bermudensis HTCC2601] gi|114543003|gb|EAU46023.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius sp. HTCC2601] Length = 495 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/497 (58%), Positives = 374/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L M V+E+RD LR+ D+++VEL ++ + AIE + + +NAY+ + A A+ +D Sbjct: 1 MSDLTKMKVAEARDALRAGDVTSVELTEACLGAIEGAGA-LNAYVHKTPEIAIEQAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + GIP+GIKD F T+G+ +QA S IL+GF+P YESTVT +L+D GAVMLG Sbjct: 60 DRIKAGDAPAMCGIPMGIKDLFCTRGVASQAASRILEGFKPEYESTVTTQLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSCYGNAVNPWRRGNDDSQLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AILL+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDAAILLQAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVPD+E L I+G T+GIP+EY ++ + I+ W +G L DAGAKIV Sbjct: 240 KDSTSADLPVPDFEAMLTGDIKGKTIGIPREYHMEGMPEEIEALWARGREMLADAGAKIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G+ I +MYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRATLAAGEGINDMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F QGVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAQGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP +SVPA L ++ +PLGLQLIG+P+ E L + Sbjct: 420 -EMQDADPVQMYLNDVFTVTVNLAGLPGVSVPAGLDKQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALERAAGFVEKPAKWW 495 >gi|254465039|ref|ZP_05078450.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacterales bacterium Y4I] gi|206685947|gb|EDZ46429.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacterales bacterium Y4I] Length = 495 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 286/497 (57%), Positives = 374/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR D ++VEL ++ ++AI+ +++ +NA++ + A A+ +D Sbjct: 1 MSDLNKLGLAEARDALRKGDTTSVELTEACLKAIDAADA-LNAFVHKTPEIAMERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G+A + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+QKL D G+VMLG Sbjct: 60 ERIKAGEAPSMCGLPIGIKDLFCTKGVPSQAASKILEGFKPEYESTVSQKLADAGSVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVSPWRRGNDDAQLTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG +T++VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMTKSVRDAAIMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T L VPD+E L I+G +GIPKEYR+D + I+K W G LK AGA+IV Sbjct: 240 KDSTSAELAVPDFEAMLTGDIRGKKIGIPKEYRMDGMPGEIEKLWSDGAEMLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGRRAKLEAGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP ++VPA L ++ +PLGLQLIG+P+ E L + Sbjct: 420 -EMTEADPVQMYLNDVFTVTVNLAGLPGVAVPAGLDKQGLPLGLQLIGKPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P +WW Sbjct: 479 YALENAAGFVAKPQQWW 495 >gi|260432955|ref|ZP_05786926.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Silicibacter lacuscaerulensis ITI-1157] gi|260416783|gb|EEX10042.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Silicibacter lacuscaerulensis ITI-1157] Length = 495 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/497 (57%), Positives = 372/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR + ++VEL ++ ++AI+ +++ +NA++ + A A+ +D Sbjct: 1 MSDLNKLGLAEARDALRKGETTSVELTEACLKAIDAADA-LNAFVHKTPEIALDRAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+Q+L D GAVMLG Sbjct: 60 DRIKGGDAPAMCGLPIGIKDLFCTKGVPSQAASRILEGFKPEYESTVSQQLADAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVSPWRRGNDDTPLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKNVRDAAIMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVP++E L I+G +GIPKEYR++ + I+K W G L+DAGA+IV Sbjct: 240 KDSTSADLPVPNFEAMLTGDIKGKKIGIPKEYRMEGMPAEIEKLWADGADMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHTQYALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTQYALPAYYVIAPAEASSNLARYDGVRYGRRAQLAQGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP ISVPA L ++ +PLGLQLIG+P+ E L + Sbjct: 420 -EMTEADPVQMYLNDVFTVTVNLAGLPGISVPAGLDKQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P KWW Sbjct: 479 YALESAAGFVAKPGKWW 495 >gi|99081759|ref|YP_613913.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ruegeria sp. TM1040] gi|122397787|sp|Q1GFB5|GATA_SILST RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|99038039|gb|ABF64651.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ruegeria sp. TM1040] Length = 495 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/497 (58%), Positives = 372/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR D ++VEL ++ ++AI+ +++ +NA++ A A+ +D Sbjct: 1 MSDLNKLGLAEARDLLRKGDTTSVELTEACLKAIDGADA-LNAFVHKTPDVALDRAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIG+KD F TKG+ +QA S+IL GF+P YESTV+QKL D GAVMLG Sbjct: 60 ARIAEGDAPAMCGLPIGMKDLFCTKGVDSQAASNILKGFKPEYESTVSQKLQDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ISPWR TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSAYGNAISPWRREGDETPLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMTKNVRDAAIMLEAMCGHDA 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+L VP++E L I+G +GIP+EYR+D + I K W +G + LK AGA+IV Sbjct: 240 KDSTSVDLAVPNFEAMLTGDIKGKKIGIPREYRMDGMPAEIAKLWDEGAAMLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRATLAQGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N+ + NDVFTV VN+AGLP ISVP + + +PLGLQLIG+P+ E L + Sbjct: 420 -EMNDEDPVKMYLNDVFTVTVNLAGLPGISVPTGVDTQGLPLGLQLIGRPWDEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P +WW Sbjct: 479 YALEQAAGFVAKPAQWW 495 >gi|254509751|ref|ZP_05121818.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacteraceae bacterium KLH11] gi|221533462|gb|EEE36450.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacteraceae bacterium KLH11] Length = 495 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/497 (57%), Positives = 369/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSELN + ++E+RD LR D+++VEL +S ++AIE++++ +NA++ + A A+ +D Sbjct: 1 MSELNKLGLAEARDALRKGDVTSVELTESCLKAIEDADA-LNAFVHKTPEIALERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIGIKD F TKG+ +QA S ILDGF+P YESTV+Q+L D GAVMLG Sbjct: 60 ARIKTGDAPSMCGLPIGIKDLFCTKGVPSQAASRILDGFKPEYESTVSQQLADAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + + TPGGSSGGS++AV+ LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVSPWRRGNDDAQLTPGGSSGGSASAVSADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L+ + G+D Sbjct: 180 GGSIRQPAAFVGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKNVRDAAIMLETMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T L VP++E L I+G +GIPKEYR+D + I+K W G LK AGA+IV Sbjct: 240 KDSTSAELAVPNFEAMLTGDIKGKKIGIPKEYRMDGMPAEIEKLWSDGAEMLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGRRAHLAQGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RARK+RTLIK+DF + F GVD ILTP TP+++F LG Sbjct: 360 EVQRRVMIGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAAGVDAILTPATPSASFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP ISVPA L + +PLGLQLIG+P+ E L + Sbjct: 420 -EMTEADPVQMYLNDVFTVTVNLAGLPGISVPAGLDAQGLPLGLQLIGRPWGEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P KWW Sbjct: 479 YALENAAGFVAKPGKWW 495 >gi|259415704|ref|ZP_05739624.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Silicibacter sp. TrichCH4B] gi|259347143|gb|EEW58920.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Silicibacter sp. TrichCH4B] Length = 495 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/497 (58%), Positives = 372/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD L D ++VEL ++ ++AI+ +++ +NA++ + A A+ +D Sbjct: 1 MSDLNKLGLAEARDLLLKGDTTSVELTEACLKAIDGADA-LNAFVHKTPEIALERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIGIKD F TKG+ +QA S+IL GF+P YESTV+QKL D GAVMLG Sbjct: 60 ARIKEGDAPAMCGLPIGIKDLFCTKGVDSQAASNILKGFKPEYESTVSQKLQDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ISPWR TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSAYGNAISPWRRGAEETPLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMTKNVRDAAIMLEAMCGHDA 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VP++E L I+G +GIP+EYR+D + I K W +G + LK AGA+IV Sbjct: 240 KDSTSADLAVPNFEAMLTGDIKGKKIGIPREYRMDGMPAEIAKLWDEGAAMLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRATLAQGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF +AF GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDAFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N+ + NDVFTV VN+AGLP ISVP + + +PLGLQLIG+P+ E L + Sbjct: 420 -EMNDEDPVKMYLNDVFTVTVNLAGLPGISVPTGVDTQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P +WW Sbjct: 479 YALEQSAGFVAKPAQWW 495 >gi|163733425|ref|ZP_02140868.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter litoralis Och 149] gi|161393213|gb|EDQ17539.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter litoralis Och 149] Length = 495 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 288/497 (57%), Positives = 371/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR+ + ++ +L ++ + AIE++ +NA++ A A A +D Sbjct: 1 MSKLNELGLAEARDALRAGETTSKDLTEACLAAIEDAGV-LNAFVHHTADLALERAATAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G A + G+PIGIKD F TKG+ +QA S IL+GF P YESTV+Q L D GAVMLG Sbjct: 60 ARLAQGAAPAMCGLPIGIKDLFCTKGVASQAGSRILEGFLPEYESTVSQNLVDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG VI+PWR TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGDVINPWRRAGDEKPLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG +T++VRD+AI+L+A++G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAIMLEAMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIPKEYR+D + I+ WQ GI+ +KDAGA+I+ Sbjct: 240 KDSTSADLVVPDFEAALSGDIRGKKIGIPKEYRMDGMPDEIEALWQTGIAMMKDAGAEII 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLDQGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIKRDF F QGVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKRDFETVFAQGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + ND+FTV VN+AGLP I+VP L +PLGLQLIG+P+ E L + Sbjct: 420 -EMTDADPVAMYLNDIFTVTVNLAGLPGIAVPGGLDANGLPLGLQLIGRPWEEAELLNAA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALEQAAGFVAKPDKWW 495 >gi|126727518|ref|ZP_01743352.1| glutamyl-tRNA amidotransferase subunit A [Rhodobacterales bacterium HTCC2150] gi|126703298|gb|EBA02397.1| glutamyl-tRNA amidotransferase subunit A [Rhodobacterales bacterium HTCC2150] Length = 495 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 283/497 (56%), Positives = 368/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + +S +RD LR+ D++A +L + + AIE++ +NA++ + A A+ +D Sbjct: 1 MTALNSLTISAARDALRAGDVTAADLTSACLSAIEDAGV-LNAFVHKTPELAMEQAKSAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ GDA D+ GIP+GIKD F TKG+ +QA S IL+GF+P YESTV+Q L D G +MLG Sbjct: 60 ARLAKGDAPDMCGIPLGIKDLFCTKGVESQAASRILEGFKPEYESTVSQNLLDQGTIMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG I+PWR S TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGDAINPWRREGSDAALTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VG+KPTYGRCSR G+++FA SLDQAG +T++VRD+AI+++A+A +D Sbjct: 180 GGSIRQPAAFTGIVGLKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAIMMRAMASHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T LPVPD+E AL I+G +GIPKEYR+D + I+K W G L+DAGA+IV Sbjct: 240 KDSTSSELPVPDFEAALTGDIRGKKIGIPKEYRMDGMDDGIEKLWADGADMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLAAGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RAR++R LIK+DF + F GVD ILTP TP+SAF LG Sbjct: 360 EVQRRVMIGTYVLSAGFYDAYYNRARRVRALIKKDFDDVFATGVDAILTPATPSSAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP ISVPA L ++ +P+GLQ+IG+P+ E L + Sbjct: 420 -EMKDVDPVQMFLNDVFTVTVNLAGLPGISVPAGLDKQGLPMGLQMIGRPWEEGALLNHA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +EK G+ +P KWW Sbjct: 479 YALEKSIGFVSKPAKWW 495 >gi|304320046|ref|YP_003853689.1| glutamyl-tRNA amidotransferase subunit A [Parvularcula bermudensis HTCC2503] gi|303298949|gb|ADM08548.1| glutamyl-tRNA amidotransferase subunit A [Parvularcula bermudensis HTCC2503] Length = 492 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 286/494 (57%), Positives = 373/494 (75%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E R L ++ SAVE +Y+ IE + + +NA++ V + A +AEESD Sbjct: 1 MTDLTSLTLAELRAALLTRKCSAVEATTAYLGRIEAAGA-LNAFVSVTPELALQSAEESD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R+ G+AR LEG+P+G+KD F TKG+ T A S IL GF P YESTVT L+ +GAVMLG Sbjct: 60 RRLAAGEARPLEGVPLGVKDLFCTKGVETTAASKILGGFSPTYESTVTANLFADGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNET+ GPV++PW+ K TPGGSSGGSSAAVA L A + GTDT Sbjct: 120 KLNMDEFAMGSSNETAASGPVVNPWKRAGLETKLTPGGSSGGSSAAVAAQLVAGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTGTVGIKPTYGRCSR GI++FA SLDQAG I R V+D+++LL+++AGYD Sbjct: 180 GGSIRQPASFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARDVKDASLLLQSMAGYDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+ PVPDY +L++ I+G+ +G+PKEYRLD + ID WQQG+ WL+ AGA+I Sbjct: 240 KDSTSVDRPVPDYMASLEKGIKGLKIGVPKEYRLDGMPSDIDSLWQQGMEWLRSAGAEIK 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLP T+YALP YYI++PAEASSNLARYDGVRYGLRVE DI EMY TR+ GFG EVK Sbjct: 300 EVSLPLTKYALPVYYIVAPAEASSNLARYDGVRYGLRVEDDDIQEMYARTRAEGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A+K+R I + + E VD++LTP+TP++AF LG++ Sbjct: 360 RRILIGTYVLSAGYYDAYYLQAQKVRKRIFDEMSGVLED-VDLLLTPSTPSAAFGLGEKS 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M ND+FTV N+AGLP ISVPA L + +PLGLQLIG+PF EET+F ++ Sbjct: 419 DDPLAM--YLNDIFTVTANLAGLPGISVPAGLDGQGLPLGLQLIGRPFDEETVFRGAAVL 476 Query: 481 EKEAGYF-RPHKWW 493 E+ A + RP +WW Sbjct: 477 EQAADFTARPEEWW 490 >gi|126739251|ref|ZP_01754945.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. SK209-2-6] gi|126719868|gb|EBA16576.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. SK209-2-6] Length = 495 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 285/497 (57%), Positives = 372/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR + ++VEL ++ ++AI+ +++ +NA++ + A A+ +D Sbjct: 1 MSDLNKLGLAEARDALRKGETTSVELTEACLKAIDAADA-LNAFVHKTPEIALERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+A + G+P+GIKD F TKG+ +QA S ILDGF+P YESTV+Q+L D GAVMLG Sbjct: 60 ARIQEGEAPAMCGLPVGIKDLFCTKGVASQAASKILDGFKPEYESTVSQQLADAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSAYGNAVSPWRRGNDDAQLTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG +T++VRD+AI+L+A+ G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAIMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T L VP++E L I+G +GIPKEYR++ + I+K W G LK AGA+IV Sbjct: 240 KDSTSAELAVPNFEAMLTGDIKGKKIGIPKEYRMEGMPAEIEKLWADGTEMLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G I EMYE +R+ GFGQ Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGNRAVLEAGDGITEMYEKSRAAGFGQ 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RAR++R LIKRDF E F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMIGTYVLSAGFYDAYYNRARRVRALIKRDFEEVFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I+VPA L + +PLGLQLIG+P+ E L + Sbjct: 420 -EMIDADPVQMYLNDVFTVTVNLAGLPGIAVPAGLDTQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P KWW Sbjct: 479 YALESAAGFVAKPGKWW 495 >gi|254462983|ref|ZP_05076399.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacterales bacterium HTCC2083] gi|206679572|gb|EDZ44059.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacteraceae bacterium HTCC2083] Length = 489 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 286/491 (58%), Positives = 367/491 (74%), Gaps = 6/491 (1%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++ +RD LRS + ++VEL +++++ IE +++ +NA++ + A A+ +D+RI G Sbjct: 1 MTLAGARDALRSGETTSVELTETFLKEIEGADA-LNAFVHHTPEIAIEQAKSADERIAGG 59 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 DA + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+Q L+D GAVMLGKLNMDE Sbjct: 60 DAPAMCGLPIGIKDLFCTKGVPSQAASAILNGFKPEYESTVSQNLFDAGAVMLGKLNMDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNETS YG V++PWR + TPGGSSGGS++AVA LC A+ GTDTGGSIRQ Sbjct: 120 FAMGSSNETSVYGNVVNPWRRGNDDTDLTPGGSSGGSASAVAADLCLAATGTDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+FTG GIKPTYGRCSR G I+FA SLDQAG +T+ VRD+AI+L+A+ YDE D+T Sbjct: 180 PAAFTGITGIKPTYGRCSRWGTIAFASSLDQAGPMTKDVRDAAIMLEAMCSYDEKDSTSA 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +LPVP++E L I+G T+GIPKEYR+D + I+K W G + LKDAGAKIV+ISLPH Sbjct: 240 DLPVPNFEAMLTGDIKGKTIGIPKEYRMDGMPDEIEKLWADGTAMLKDAGAKIVDISLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKHRI 363 TQYALPAYY+I+PAEASSNLARYDGVRYG R G I EMYE TR+ GFG EV+ R+ Sbjct: 300 TQYALPAYYVIAPAEASSNLARYDGVRYGHRATLEAGDGITEMYEKTRAEGFGPEVQRRV 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 MIGTYVLS+ YD++Y RAR++R LIK+DF + F GVD ILTP TP+SAF +G E ++ Sbjct: 360 MIGTYVLSAGFYDAYYNRARRVRALIKKDFDDVFAAGVDAILTPATPSSAFGIG-EMKDA 418 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + NDVFTV VN+AGLP I+VP L K +PL LQLIG+P+ E L + +E+ Sbjct: 419 DPVQMYMNDVFTVTVNLAGLPGIAVPTGLDSKGLPLALQLIGKPWEEGDLLNTAYALEQA 478 Query: 484 AGYF-RPHKWW 493 AG+ +P KWW Sbjct: 479 AGFVAKPAKWW 489 >gi|114773343|ref|ZP_01450547.1| glutamyl-tRNA amidotransferase subunit A [alpha proteobacterium HTCC2255] gi|114546277|gb|EAU49188.1| glutamyl-tRNA amidotransferase subunit A [alpha proteobacterium HTCC2255] Length = 495 Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust. Identities = 284/497 (57%), Positives = 372/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ + ++E+R +LR K+I++VEL +S I A+E S + +NAY + AR A+++D Sbjct: 1 MTDLHKITIAEARTKLRKKEITSVELTESCIGAVEESKA-LNAYCVKTPELAREQAKKAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + G+A D+ GIP+GIKD F TK I++QA S IL F+P YESTVT +LWD GA+MLG Sbjct: 60 ELLSKGNAPDMCGIPLGIKDLFCTKNINSQAASKILTDFKPEYESTVTSRLWDQGAIMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YGP ++PW+ S K T GGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGPAVNPWQRDGSDKKLTAGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VG+KPTYGR SR GII+FA SLDQAG +T+TV+DSAI L AI+G+D+ Sbjct: 180 GGSIRQPAAFTGIVGVKPTYGRVSRWGIIAFASSLDQAGPMTKTVKDSAIFLNAISGHDD 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VP++E A+ I+G +GIPKEYRLD + I+K W+ G L+DAGA+IV Sbjct: 240 KDSTSAPFEVPNFEAAITGDIRGKKIGIPKEYRLDGMPDEIEKLWKNGADMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 ++SLPHT+YALPAYY+++PAEASSNLARYDGVRYG R G+ I EMY TRS GFG Sbjct: 300 DVSLPHTKYALPAYYVLAPAEASSNLARYDGVRYGHRATLRSGEGIDEMYARTRSEGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R+M+G YVLS+ YD++Y RA+++RTLIK+DF + + GVD ILTP TP++AF LG Sbjct: 360 EVKRRVMVGAYVLSAGFYDAYYRRAQRVRTLIKKDFDDVYSLGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N + NDVFTV VN+AGLP +SVPA L + +PLGLQLIG+P+ E + +V Sbjct: 420 -EMKNEDPIKMYLNDVFTVTVNLAGLPGVSVPAGLSSEGLPLGLQLIGRPWEEGEMLNVA 478 Query: 478 QIIEKEAGY-FRPHKWW 493 I+E A + +P+KWW Sbjct: 479 SILENGAEFNLKPNKWW 495 >gi|163745931|ref|ZP_02153290.1| glutamyl-tRNA amidotransferase subunit A [Oceanibulbus indolifex HEL-45] gi|161380676|gb|EDQ05086.1| glutamyl-tRNA amidotransferase subunit A [Oceanibulbus indolifex HEL-45] Length = 496 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 285/495 (57%), Positives = 373/495 (75%), Gaps = 6/495 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +LN ++++++RD LR + ++ L ++ ++AI+ + + +NA++ + A A +D R Sbjct: 4 DLNKLSLADARDALRKGETTSAALTEACLKAIDGAGA-LNAFVHRTPEIAMEQAAAADAR 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I GDA + G+PIGIKD F TKG+ +QA S IL+GF P YESTV+QKL D+GAVMLGKL Sbjct: 63 IKQGDAPAMCGLPIGIKDLFCTKGVPSQAGSRILEGFLPEYESTVSQKLKDSGAVMLGKL 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNETS YG ++PWR T + TPGGSSGGS+AAVA LC A+ GTDTGG Sbjct: 123 NMDEFAMGSSNETSVYGNAVNPWRREGDTAELTPGGSSGGSAAAVAADLCLAATGTDTGG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG +T+TVRD+AI+L+A+ G+D D Sbjct: 183 SIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMTKTVRDAAIMLEAMCGHDAKD 242 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T +L VPD+E AL I+G +GIP+EYR+D + IDK WQ GI+ +KDAGA+IV+I Sbjct: 243 STSADLAVPDFEAALTGDIRGKKIGIPREYRMDGMPEEIDKLWQNGIAMMKDAGAEIVDI 302 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQEV 359 SLPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG EV Sbjct: 303 SLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLDHGDGITEMYEKTRAEGFGHEV 362 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+M+GTYVLS+ YD++Y RARK+RTLIK+DF E F QG+D ILTP TP++AF LG E Sbjct: 363 QRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEEVFAQGIDSILTPATPSAAFGLG-E 421 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ + ND+FTV VN+AGLP +++P +PLGLQLIG+P+ E L S Sbjct: 422 MKDADPVAMYLNDIFTVTVNLAGLPGVALPTGQSATGLPLGLQLIGRPWEEAELLSSAYA 481 Query: 480 IEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 482 LERAAGFVAKPEKWW 496 >gi|16126676|ref|NP_421240.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Caulobacter crescentus CB15] gi|221235455|ref|YP_002517892.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Caulobacter crescentus NA1000] gi|39931626|sp|Q9A5L0|GATA_CAUCR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790384|sp|B8GZJ5|GATA_CAUCN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|13423982|gb|AAK24408.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caulobacter crescentus CB15] gi|220964628|gb|ACL95984.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Caulobacter crescentus NA1000] Length = 489 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 281/491 (57%), Positives = 369/491 (75%), Gaps = 5/491 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + + + D L +++ ++VEL ++I+AIE + +NAYI KA A +SD R Sbjct: 3 LTNLTLKAAIDGLAAREFTSVELTRAHIEAIEAARG-LNAYILETPDKAIDMAAKSDARR 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A LEG P+G+KD F T G+ T ACS IL+ F P YESTVT +LW +GAVMLGKLN Sbjct: 62 ALGEAGPLEGAPLGVKDLFCTNGVRTTACSKILENFVPTYESTVTSQLWRDGAVMLGKLN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +D+FAMGSSNETSY+GPV +PWR+ ST TPGGSSGGS+AAVA LC + TDTGGS Sbjct: 122 LDQFAMGSSNETSYFGPVTNPWRAQGSTKALTPGGSSGGSAAAVAADLCLGATATDTGGS 181 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I +TV D+A+LL +++G+D D+ Sbjct: 182 IRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAKTVEDAALLLTSMSGHDPKDS 241 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T +++PVPD+ + + +S++G+ +GIPKEYR+D + I+K WQ GI+WLK+AG +IV+IS Sbjct: 242 TSLDIPVPDFTQFVGKSVKGLKIGIPKEYRVDNMPAEIEKLWQDGIAWLKEAGCEIVDIS 301 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPHT+YALPAYYI++PAEASSNLARYDG+RYGLR EG ++ E+YENTR+ GFG EVK RI Sbjct: 302 LPHTKYALPAYYIVAPAEASSNLARYDGMRYGLREEGANLTEIYENTRASGFGDEVKRRI 361 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTYVLS+ YD++YL+A K+R I DF A+ Q D ILTPT P++AF LG EN++ Sbjct: 362 LIGTYVLSAGYYDAYYLKALKVRRRIAEDFDNAWTQ-CDAILTPTAPSAAFGLG--ENSN 418 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + NDVFTV N+AGLP +S+PA L +PLGLQ+IG+P E T+FSV +EK Sbjct: 419 DPIAMYLNDVFTVTTNLAGLPGLSLPAGLDANGLPLGLQIIGKPLDEATVFSVAGAVEKA 478 Query: 484 AGYF-RPHKWW 493 AG+ + KWW Sbjct: 479 AGFTAKAEKWW 489 >gi|295690144|ref|YP_003593837.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Caulobacter segnis ATCC 21756] gi|295432047|gb|ADG11219.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caulobacter segnis ATCC 21756] Length = 490 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 280/494 (56%), Positives = 369/494 (74%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + + + D L + ++VEL ++I A+E + +NAYI +KA A +SD Sbjct: 1 MSALTKLTLKAAVDGLAKGEFTSVELTKAHIDAVEAARG-LNAYILETPEKALDMAAKSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G A LEG P+G+KD F T+G+ T ACS IL+ F P YESTVT +LW +GAVMLG Sbjct: 60 ARRAQGQAGPLEGAPLGVKDLFCTEGVRTTACSKILENFVPTYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+D+FAMGSSNETSY+GPV +PWR S TPGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDQFAMGSSNETSYFGPVTNPWRVQGSNKALTPGGSSGGSAAAVAADLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I +TV D+A+LL +++G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAKTVEDAALLLTSMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++PVPD+ + + +S++G+ +G+PKEYR+D + I+K WQ GI+WLK+AG +IV Sbjct: 240 KDSTSLDVPVPDFTQFVGKSVKGLRIGVPKEYRVDGMPAEIEKLWQDGIAWLKEAGCEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDG+RYGLR +G ++ E+YENTR+ GFG EVK Sbjct: 300 DISLPHTKYALPAYYIVAPAEASSNLARYDGMRYGLREDGANLTEIYENTRAAGFGDEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A K+R I DF A+E+ VD ILTPT P++AF LG E Sbjct: 360 RRILIGTYVLSAGYYDAYYLKALKVRRRIAEDFDNAWEK-VDAILTPTAPSAAFGLG--E 416 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N++ + NDVFTV N+AGLP +S+PA L +PLGLQ+IG+P E T+FSV + Sbjct: 417 NSNDPIAMYLNDVFTVTTNLAGLPGLSLPAGLDANGLPLGLQIIGKPLDEGTVFSVAGAL 476 Query: 481 EKEAGY-FRPHKWW 493 EK AG+ + KWW Sbjct: 477 EKAAGFKAKAEKWW 490 >gi|298291516|ref|YP_003693455.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Starkeya novella DSM 506] gi|296928027|gb|ADH88836.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Starkeya novella DSM 506] Length = 493 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 287/494 (58%), Positives = 366/494 (74%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++ +R+ L +A EL ++Y+ AIE + +NAY+ +KA A+ SD Sbjct: 1 MSELTRLTITAAREGLAQGHFTATELTEAYLAAIEPAG-DLNAYVLTTPEKALETAKASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+A LEGIP+GIKD +A G+ T A S+IL F P YESTVT +LW +GAV LG Sbjct: 60 ARIAKGEAGPLEGIPLGIKDNYAVDGVRTTAGSNILKNFVPAYESTVTSQLWRDGAVFLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSS E+S +GP ++PWR S PGGSSGGS+AAVA + A + GTDT Sbjct: 120 KLNQDEFAMGSSTESSAFGPTVNPWRRNGSEQPLVPGGSSGGSAAAVAAHIAAGAAGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I R+V D+A+LL+++AG+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARSVNDAALLLRSMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPDYE S++G +GIP+EYR+D +SP I W +G L+DAGA+IV Sbjct: 240 KDSTSADLAVPDYEVHCGSSVRGKRIGIPREYRVDGMSPEIAALWDKGADMLRDAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++ AEASSNLARYDGVRYG RV G+DI+EMYE TR+ GFG EV+ Sbjct: 300 DISLPHTKYALPAYYIVALAEASSNLARYDGVRYGERVPGRDIVEMYEKTRAAGFGDEVR 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YL+A+K+RTLIKRDF AF G+D +L P TP+ AF +G E+ Sbjct: 360 RRIMIGTYVLSAGYYDAYYLKAQKVRTLIKRDFENAFADGIDAVLAPATPSPAFGIG-EK 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + + DVFTV +NMAGLP ISVPA L + +PLGLQLIG+PF EE LFS+ Q+I Sbjct: 419 SGADPVEMYLQDVFTVTLNMAGLPGISVPAGLSSEGLPLGLQLIGRPFGEEGLFSLAQVI 478 Query: 481 EKEAGYFR-PHKWW 493 E+ AG F +WW Sbjct: 479 EEAAGRFDVTDRWW 492 >gi|254475384|ref|ZP_05088770.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ruegeria sp. R11] gi|214029627|gb|EEB70462.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ruegeria sp. R11] Length = 495 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 282/497 (56%), Positives = 371/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + +S++RD LR D ++VEL ++ ++AI+ +++ +NA++ + A A+ +D Sbjct: 1 MTELNKLTLSDARDALRKGDTTSVELTEACLKAIDAADA-LNAFVHKTPEIALERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+Q+L D+GAVMLG Sbjct: 60 ARIQAGDAPAMCGLPIGIKDLFCTKGVDSQAASGILEGFKPEYESTVSQQLQDSGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVSPWRREGDDAPLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR G+++FA SLDQAG +T++VRD+A++L+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAMMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VP++E L I+G +GIP+EYR+D + I+K W +G L+ AGA+IV Sbjct: 240 KDSTSADLAVPNFEAMLTGDIKGKKIGIPREYRMDGMPAEIEKLWSEGAEMLRAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGQRATLEAGDGITEMYEKTRAAGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F QG+D ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAQGIDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP +SVP L K +PLGLQLIG+P+ E L + Sbjct: 420 -EMTDADPVQMYLNDVFTVTVNLAGLPGVSVPTGLDSKGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P +WW Sbjct: 479 YALESAAGFVAKPGQWW 495 >gi|163740844|ref|ZP_02148237.1| glutamyl-tRNA amidotransferase subunit A [Phaeobacter gallaeciensis 2.10] gi|161385835|gb|EDQ10211.1| glutamyl-tRNA amidotransferase subunit A [Phaeobacter gallaeciensis 2.10] Length = 495 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 281/497 (56%), Positives = 375/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + +S++RD LR + ++VEL ++ ++AI+ +++ +NA++ + A A+ +D Sbjct: 1 MTELNKLTLSDARDALRKGETTSVELTEACLKAIDAADA-LNAFVHKTPEIALERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+Q+L D+GAVMLG Sbjct: 60 ARIKAGDAPAMCGLPIGIKDLFCTKGVASQAASGILEGFKPEYESTVSQQLQDSGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + T + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVSPWRRGNDTAELTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR G+++FA SLDQAG +T++VRD+A++L+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAMMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VP++E L I+G +GIP+EYR+D + I+K W +G L+ AGA+IV Sbjct: 240 KDSTSADLAVPNFEAMLTGDIKGKKIGIPREYRMDGMPGEIEKLWSEGAEMLRAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGQRATLEAGDGITEMYEKTRAAGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F QG+D ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAQGIDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP ISVPA + + +PLGLQLIG+P+ E L + Sbjct: 420 -EMIDADPVQMYLNDVFTVTVNLAGLPGISVPAGIDAQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P WW Sbjct: 479 YALEEAAGFVAKPGHWW 495 >gi|329851402|ref|ZP_08266159.1| glutamyl-tRNA and/or aspartyl-tRNA amidotransferase, A subunit [Asticcacaulis biprosthecum C19] gi|328840248|gb|EGF89820.1| glutamyl-tRNA and/or aspartyl-tRNA amidotransferase, A subunit [Asticcacaulis biprosthecum C19] Length = 494 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 285/495 (57%), Positives = 369/495 (74%), Gaps = 3/495 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + + ++ D L+SK S+ EL D++I AIE++N +NAY+E KARA A SD Sbjct: 1 MSNLTHLTLKDAVDGLKSKQFSSAELTDAFIGAIESANPALNAYVETTFDKARAQAAASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ LEG P+GIKD + T G+ T ACS IL F P YESTVTQ LWD+GAVMLG Sbjct: 61 AKLAKGEGGRLEGAPLGIKDLYCTAGVRTTACSGILSNFVPTYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS++GPV +PW+S S TPGGSSGGS++AVA LC A+ +DT Sbjct: 121 KLNMDEFAMGSSNETSHWGPVTNPWKSRGSNAALTPGGSSGGSASAVAADLCLAATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG IT+TV DSAILL+++ +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRYGMVAFASSLDQAGPITKTVADSAILLQSMCSHDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + +PVPD+ + +S++G+ +GIP EYRLD + ID W+QGI+WLKDAGA+IV Sbjct: 241 KDSTSLTVPVPDFASFVGKSVKGLRIGIPDEYRLDGIPAEIDALWEQGIAWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 ISLPHT+YALP YYII+PAEASSNLARYDG+RYG R + + + ++YE +RS GFG+EV Sbjct: 301 RISLPHTKYALPCYYIIAPAEASSNLARYDGMRYGHRTDKAQGLTDVYELSRSEGFGKEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIMIGTYVLS+ YD++Y++A K+R I DF A+ DVILTP TP++AF LG + Sbjct: 361 KRRIMIGTYVLSAGFYDAYYVKALKVRRRIAEDFINAWNS-CDVILTPATPSAAFELGDQ 419 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + NDVFTV N+AGLP +SVPA L + +PLGLQ+IG+ E T+F+VG Sbjct: 420 AKAADPVAMYLNDVFTVTTNLAGLPGMSVPAGLDSQGLPLGLQVIGKTLDEGTVFAVGAA 479 Query: 480 IEKEAGY-FRPHKWW 493 +E+ AG+ +P KWW Sbjct: 480 LEQAAGFSAKPSKWW 494 >gi|260428283|ref|ZP_05782262.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Citreicella sp. SE45] gi|260422775|gb|EEX16026.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Citreicella sp. SE45] Length = 495 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 286/497 (57%), Positives = 373/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L M V+E+RD LR+ D+++VEL D+ + AI+ +++ + A++ + A A+ +D Sbjct: 1 MTDLTKMKVAEARDALRAGDVTSVELTDACLGAIDAADA-LGAFVHKTPEIAMEQAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI +G+A L GIP+GIKD F T+G+ +QA S IL+GF+P YESTVT KL+D GAVMLG Sbjct: 60 ARIKDGEAPSLCGIPMGIKDLFCTRGVPSQAASRILEGFKPEYESTVTGKLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSCYGNAVNPWRRGNDDTALTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AILL+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDAAILLQAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T L VPD+E L I+G T+GIP+EY +D + I+ W +G L DAGA+IV Sbjct: 240 KDSTSAELAVPDFEAMLTGDIRGKTIGIPREYHMDGMPDEIEALWARGRDMLADAGARIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G+ I +MYE TR+ GFG Sbjct: 300 DISLPHTRYALPAYYVIAPAEASSNLARYDGVRYGHRARLSQGEGINDMYEKTRAEGFGA 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF +AF GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDAFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP +SVPA L ++ +PLGLQLIG+P+ E L + Sbjct: 420 -EMQDADPVQMYLNDVFTVTVNLAGLPGVSVPAGLDKQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALERAAGFVEKPAKWW 495 >gi|84499718|ref|ZP_00998006.1| glutamyl-tRNA amidotransferase subunit A [Oceanicola batsensis HTCC2597] gi|84392862|gb|EAQ05073.1| glutamyl-tRNA amidotransferase subunit A [Oceanicola batsensis HTCC2597] Length = 496 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 285/496 (57%), Positives = 366/496 (73%), Gaps = 6/496 (1%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL M ++ +RD LR+ ++++VEL ++ + AI+ +++ +NA++ A A +D Sbjct: 3 NELTKMTIATARDALRAGEVTSVELTEACLTAIDGADA-LNAFVHKTPDIALERARAADD 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 RI G+A + GIP+GIKD F T G+ +QA S ILDGFRP YESTV+Q L D GAVMLGK Sbjct: 62 RIKAGEAPAMCGIPVGIKDLFCTSGVPSQAASGILDGFRPEYESTVSQNLADAGAVMLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSNETS YG ++PWR D TPGGSSGGS++AVA LC A+ GTDTG Sbjct: 122 LNMDEFAMGSSNETSVYGNAVNPWRRGDDDTNLTPGGSSGGSASAVAADLCLAATGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L A+ +D Sbjct: 182 GSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDAAIMLGAMCSHDPK 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T +LPVPD+E AL I+G T+GIP+EY +D + I+ W +G L DAGAKIV+ Sbjct: 242 DSTSADLPVPDFEAALTGDIKGKTIGIPREYHMDGMPQEIEDLWTRGKEMLADAGAKIVD 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQE 358 I+LPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG E Sbjct: 302 ITLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLAQGDGITEMYEKTRAEGFGDE 361 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK R+MIGTYVLS+ YD++Y RARK+R LIK+DF + F QGVD ILTP TP++AF LG Sbjct: 362 VKRRVMIGTYVLSAGFYDAYYNRARKVRALIKKDFEDVFAQGVDAILTPATPSAAFGLG- 420 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E ++ + NDVFTV VN+AGLP I+VPA L ++ +PLGLQLIG+P+ E L + Sbjct: 421 EMKDADPVRMYLNDVFTVTVNLAGLPGIAVPAGLDKQGLPLGLQLIGRPWEEADLLNTAY 480 Query: 479 IIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 481 ALEQAAGFVAKPAKWW 496 >gi|315500163|ref|YP_004088966.1| glutamyl-tRNA(gln) amidotransferase, a subunit [Asticcacaulis excentricus CB 48] gi|315418175|gb|ADU14815.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Asticcacaulis excentricus CB 48] Length = 494 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 283/495 (57%), Positives = 365/495 (73%), Gaps = 3/495 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + + + D L++K S+ EL +++I AIE +N+ +NAY+ KAR A ESD Sbjct: 1 MSDLTKLTLKSALDGLKAKQFSSTELTEAFIGAIEKANTALNAYVLTTFDKAREMAGESD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R+ G++R LEG P+GIKD F TKG+ T ACS ILD F P YESTVTQ LWD+GAVMLG Sbjct: 61 RRLKAGESRPLEGAPLGIKDLFCTKGVRTTACSGILDTFVPPYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS++GPV +PW+S S TPGGSSGGS++AVA LC A+ +DT Sbjct: 121 KLNMDEFAMGSSNETSHWGPVTNPWKSNASNAPLTPGGSSGGSASAVAADLCLAATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G+++FA SLDQAG IT+TV D+AI+L+++ +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRASRYGMVAFASSLDQAGPITKTVEDAAIMLQSMCSHDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + +PD+ + +SI+G+ VGIP EYRLD + ID W+QGI WLKDAGA+IV Sbjct: 241 KDSTSLPNALPDFSSFVGRSIKGLRVGIPDEYRLDGIPGEIDALWEQGIQWLKDAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEV 359 ISLP+T+YALP YYI++PAEASSNLARYDG+R+G R E L + YE +RS GFG EV Sbjct: 301 RISLPNTKYALPCYYIVAPAEASSNLARYDGMRFGHRTEAASSLTDTYELSRSEGFGAEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIMIGTYVLS+ YD++Y++A K+R I DF A+ DVILTP TP++AF LG Sbjct: 361 KRRIMIGTYVLSAGFYDAYYVKALKVRRRIAEDFVNAWNS-CDVILTPATPSAAFQLGDT 419 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + + NDVFTV N+AGLP ++VPA L K +PLGLQ+IG+ E T +VG + Sbjct: 420 EKAADPVQMYLNDVFTVTTNLAGLPGMAVPAGLDSKGLPLGLQVIGKALDEGTTLAVGAV 479 Query: 480 IEKEAGY-FRPHKWW 493 +EK AG+ +P +WW Sbjct: 480 LEKAAGFTHKPSQWW 494 >gi|163737472|ref|ZP_02144889.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Phaeobacter gallaeciensis BS107] gi|161388998|gb|EDQ13350.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Phaeobacter gallaeciensis BS107] Length = 495 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 280/497 (56%), Positives = 374/497 (75%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + +S++RD LR + ++VEL ++ ++AI+ +++ +NA++ + A ++ +D Sbjct: 1 MTELNKLTLSDARDALRKGETTSVELTEACLKAIDAADA-LNAFVHKTPEIALERSKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+Q+L D GAVMLG Sbjct: 60 ARIKAGDAPAMCGLPIGIKDLFCTKGVASQAASGILEGFKPEYESTVSQQLQDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + T + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVSPWRRGNDTAELTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR G+++FA SLDQAG +T++VRD+A++L+A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAMMLEAMCGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VP++E L I+G +GIP+EYR+D + I+K W +G L+ AGA+IV Sbjct: 240 KDSTSADLAVPNFEAMLTGDIKGKKIGIPREYRMDGMPAEIEKLWSEGAEMLRAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGQRATLEAGDGITEMYEKTRAAGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF + F QG+D ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKKDFEDVFAQGIDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP ISVPA + + +PLGLQLIG+P+ E L + Sbjct: 420 -EMIDADPVQMYLNDVFTVTVNLAGLPGISVPAGIDAQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P WW Sbjct: 479 YALEEAAGFVAKPGHWW 495 >gi|167645485|ref|YP_001683148.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Caulobacter sp. K31] gi|189045243|sp|B0T193|GATA_CAUSK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|167347915|gb|ABZ70650.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caulobacter sp. K31] Length = 490 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 282/494 (57%), Positives = 367/494 (74%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + + + D L D ++VEL ++I AIE + +NA++ ++A + A SD Sbjct: 1 MSSLTSLTLKGALDGLEKGDFTSVELTRAHIDAIEAARG-LNAFLLETPEQALSMAAASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R AR L+GIP+GIKD F T+G+ T A S IL+ F P YESTVT +LW +GAVMLG Sbjct: 60 ARRALDAARPLDGIPLGIKDLFCTQGVRTTAASKILEPFVPQYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YGPV++PWR S TPGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGPVVNPWRKAGSNQALTPGGSSGGSAAAVAADLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG I +TV D+A+LL +++G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIAKTVTDAALLLTSMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++PVPD+ + +SI+G+ +G+P+EYR+D + I+K W GI+WLKDAG +IV Sbjct: 240 KDSTSLDVPVPDFSAFVGKSIKGLRIGVPQEYRVDGMPAEIEKLWADGIAWLKDAGCEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT+YALPAYYI++PAEASSNLARYDG+RYGLR EG ++ E+YENTR+ GFG EVK Sbjct: 300 EISLPHTKYALPAYYIVAPAEASSNLARYDGMRYGLRAEGSNLTEVYENTRAEGFGDEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A K+R I DF A+E+ D ILTPT P++AF LG E Sbjct: 360 RRILIGTYVLSAGYYDAYYLKALKVRRRIAEDFDNAWER-CDAILTPTAPSAAFGLG--E 416 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+S + NDVFTV N+AGLP +S+PA L +PLGLQ+IG+P E T+FSV ++ Sbjct: 417 NSSDPIAMYLNDVFTVTTNLAGLPGLSLPAGLDANGLPLGLQIIGKPLDEGTVFSVAGVL 476 Query: 481 EKEAGYF-RPHKWW 493 EK AG+ + KWW Sbjct: 477 EKAAGFTAKATKWW 490 >gi|89053712|ref|YP_509163.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Jannaschia sp. CCS1] gi|109829841|sp|Q28T24|GATA_JANSC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|88863261|gb|ABD54138.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Jannaschia sp. CCS1] Length = 494 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 282/497 (56%), Positives = 367/497 (73%), Gaps = 7/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++++RD LR ++++V+L + + AI+ +++ + ++ A A+ +D Sbjct: 1 MSDLNALTIADARDALRKGEVTSVDLTQACLSAIDQADA-LGTFVHKTPDLALERAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA D+ GIP+GIKD F T+G+ +QA S ILDGF+P YESTV+ KL D GAVMLG Sbjct: 60 ARIAEGDAPDMCGIPVGIKDLFCTEGVPSQAASRILDGFKPEYESTVSGKLRDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR+ +S TPGGSSGGS++AVAG LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWRAGNSDAALTPGGSSGGSASAVAGDLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VG+KPTYGRCSR GI++FA SLDQAG +T+TVRD+AI+ +A+ GYD Sbjct: 180 GGSIRQPAAFTGIVGLKPTYGRCSRWGIVAFASSLDQAGPMTKTVRDAAIMGRAMMGYDA 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T N+ VPD+E L I+G +GIPKEYR+D + I+ W G + LKDAGA I Sbjct: 240 KDSTSANIDVPDFEAMLTGDIRGKIIGIPKEYRMDGMPDEIETLWADGTAMLKDAGAVIR 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGYRADMAPGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RAR++R LIKRDF E F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMIGTYVLSAGFYDAYYNRARRVRALIKRDFDEVFAAGVDAILTPATPSAAFELG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 KE ++ M NDVFTV VN+AGLP ++VP + +PLGLQLIG+P+ E L + Sbjct: 420 KEVSDPVEM--YLNDVFTVTVNLAGLPGVAVPTGVDRNGLPLGLQLIGKPWEEGELLNTA 477 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P +WW Sbjct: 478 YALEAAAGFVAKPARWW 494 >gi|197104790|ref|YP_002130167.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Phenylobacterium zucineum HLK1] gi|229485996|sp|B4R968|GATA_PHEZH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|196478210|gb|ACG77738.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Phenylobacterium zucineum HLK1] Length = 490 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 283/494 (57%), Positives = 371/494 (75%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + + + D L SK S+VEL ++++A+E + + +NAY+ +A A +D Sbjct: 1 MAELTSLTLKAALDGLSSKSFSSVELTQAHLEAVEAARA-LNAYVVETPDRALEMARAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+A LEG P+GIKD F T+G+ + A S IL GF+P YESTVT LW +GAVMLG Sbjct: 60 ARRARGEAGRLEGAPLGIKDLFCTEGVESTAASKILKGFKPTYESTVTANLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS +GPV++PWR+ + TPGGSSGGS++AVA LC + TDT Sbjct: 120 KLNMDEFAMGSSNETSAWGPVVNPWRAEGGNAQLTPGGSSGGSASAVAAELCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG + RTV D+AILL +++G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMARTVEDAAILLTSMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + + PD+ +S++G+ VGIPKEYR+D + P I+K W+QGI+WLK+AG +IV Sbjct: 240 KDSTSLPVETPDFASFCGKSVKGLRVGIPKEYRVDGMPPEIEKLWEQGIAWLKEAGCEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+YALPAYYII+PAEASSNLARYDG+R+GLRVEG ++ E YENTR+ GFG EVK Sbjct: 300 EVSLPHTKYALPAYYIIAPAEASSNLARYDGMRFGLRVEGGNLTETYENTRAEGFGAEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A K+R I DF A+E+ VD +LTPT P++AF LG++ Sbjct: 360 RRILIGTYVLSAGYYDAYYLKALKVRRRIADDFDRAWEK-VDALLTPTAPSAAFALGEKS 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M ND+FTV VN+AGLP +SVPA + +PLGLQLIG+ E TLFS+G I Sbjct: 419 DDPVAM--YLNDIFTVTVNLAGLPGMSVPAGVDANGLPLGLQLIGKALDEGTLFSLGSAI 476 Query: 481 EKEAGY-FRPHKWW 493 EK A + +P KWW Sbjct: 477 EKAADFKAKPKKWW 490 >gi|255264089|ref|ZP_05343431.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Thalassiobium sp. R2A62] gi|255106424|gb|EET49098.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Thalassiobium sp. R2A62] Length = 493 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 280/497 (56%), Positives = 370/497 (74%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++ +RD+LR+K+I++ EL ++ + IE + +NA++ A+ A +D Sbjct: 1 MSDLNKLTIAGARDKLRAKEITSAELTEACLSEIEGAGV-LNAFVHHTPDLAKEQAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KRI +GDA L GIP+GIKD F TKG+ +QA S ILDGF+P YESTV+ +L+D GAVMLG Sbjct: 60 KRISSGDAPALCGIPLGIKDLFCTKGVASQAASAILDGFKPEYESTVSAQLFDRGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG V++PW+ D TPGGSSGGS++AVA LC + GTDT Sbjct: 120 KLNMDEFAMGSSNETSTYGDVVNPWKIDDR--NLTPGGSSGGSASAVAADLCLGATGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L+A+ G+D Sbjct: 178 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDAAIMLEAMCGHDA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIPKEYR+D + I+K W+ G + LKDAGA+I Sbjct: 238 KDSTSADLAVPDFEAALTGDIRGKVIGIPKEYRMDGMPAEIEKLWEDGTAMLKDAGAEIR 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG Sbjct: 298 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLDAGDGITEMYEKTRAEGFGA 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD+++ RARK+RTLIK+DF + F GVD ILTP TP++AF LG Sbjct: 358 EVQRRVMVGTYVLSAGFYDAYFNRARKVRTLIKKDFEDVFAAGVDAILTPATPSAAFGLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP +++PA + +PLGLQLIG+P+ E + + Sbjct: 418 -EAAKADPVQMYLNDVFTVTVNLAGLPGVAIPAGMSADGLPLGLQLIGRPWEEGDMLNTA 476 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ G+ +P +WW Sbjct: 477 YSLERACGFVAKPDRWW 493 >gi|110679283|ref|YP_682290.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Roseobacter denitrificans OCh 114] gi|123065658|sp|Q168I9|GATA_ROSDO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109455399|gb|ABG31604.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseobacter denitrificans OCh 114] Length = 495 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 287/497 (57%), Positives = 370/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR+ + ++ +L ++ + AIE + +NA++ A A A +D Sbjct: 1 MSKLNELGLAEARDALRAGETTSKDLTEACLTAIEEAGV-LNAFVHHTADLALERAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G A + G+PIG+KD F TKG+ +QA S IL+GF P YESTV+Q L D GAVMLG Sbjct: 60 ARLAQGAAPAMCGLPIGMKDLFCTKGVASQAGSRILEGFLPEYESTVSQNLVDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG VI+PWR D TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSIYGDVINPWRRKDDEKPLTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR GI++FA SLDQAG +T++VRD+AI+L+A++G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMTKSVRDAAIMLEAMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIPKEYR+D + I+ WQ GI+ +KDAGA+I+ Sbjct: 240 KDSTSADLAVPDFEAALSGDIRGKKIGIPKEYRMDGMPDEIEALWQTGIAMMKDAGAEII 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLDQGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RARK+RTLIK+DF F QGVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIKQDFETVFAQGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + ND+FTV VN+AGLP I+VP L +PLGLQLIG+P+ E L + Sbjct: 420 -EMTDADPVAMYLNDIFTVTVNLAGLPGIAVPGGLDANGLPLGLQLIGRPWEEAELLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ G+ +P KWW Sbjct: 479 YALEQAVGFVAKPQKWW 495 >gi|84686238|ref|ZP_01014133.1| glutamyl-tRNA amidotransferase subunit A [Maritimibacter alkaliphilus HTCC2654] gi|84665765|gb|EAQ12240.1| glutamyl-tRNA amidotransferase subunit A [Rhodobacterales bacterium HTCC2654] Length = 494 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 282/498 (56%), Positives = 373/498 (74%), Gaps = 9/498 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD L+ D+++VEL ++ I AI+ + + +NA++ A A+ +D Sbjct: 1 MSDLNKLTIAEARDALKKGDVTSVELTEACIGAIDAAGA-LNAFVHKTPDIALERAKAAD 59 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ +G+ A + GIP+GIKD F T+G+ +QA S IL+GF+P YESTV+Q L D GAVML Sbjct: 60 ARLKSGEEAPAMCGIPVGIKDLFCTQGVESQAASGILEGFKPEYESTVSQNLIDAGAVML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSSNETS YG ++PW+ D + TPGGSSGGS++AVA LC A+ GTD Sbjct: 120 GKLNMDEFAMGSSNETSVYGNAVNPWKVDDR--QLTPGGSSGGSASAVAADLCLAATGTD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TG GIKPTYGRCSR GII+FA SLDQAG +T+ VRD+AI+L+A+ +D Sbjct: 178 TGGSIRQPAALTGITGIKPTYGRCSRWGIIAFASSLDQAGPMTKNVRDAAIMLEAMCSHD 237 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T ++PVP++E L I+G +GIPKEYR+D + ++K W G + LKDAGA+I Sbjct: 238 PKDSTSADIPVPNFEAMLTGDIKGKVIGIPKEYRMDGMPEEVEKLWADGTAMLKDAGARI 297 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFG 356 ++ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G+ I++MYE TR+ GFG Sbjct: 298 IDISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRASLAKGEGIVDMYEKTRAEGFG 357 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EV+ R+M+GTYVLS+ YD++Y RAR++R LIKRDF EAF+QGVD ILTP TP AF L Sbjct: 358 HEVQRRVMVGTYVLSAGFYDAYYNRARRVRALIKRDFDEAFDQGVDAILTPATPGPAFGL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G E + + + DVFTV VN+AGLP ISVPA L ++ +PLGLQLIG+P+ E L +V Sbjct: 418 G-EMSEADPVEMYLQDVFTVTVNLAGLPGISVPAGLDKQGLPLGLQLIGRPWEEGDLLNV 476 Query: 477 GQIIEKEAGYF-RPHKWW 493 +E AG+ +P KWW Sbjct: 477 AYALEGAAGFVSKPEKWW 494 >gi|85704312|ref|ZP_01035415.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius sp. 217] gi|85671632|gb|EAQ26490.1| glutamyl-tRNA amidotransferase subunit A [Roseovarius sp. 217] Length = 495 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 285/497 (57%), Positives = 369/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + ++E+RD LR D+++VEL ++ + A+E + + +NA++ ARA A+ +D Sbjct: 1 MTELNRLTIAEARDALRKGDVTSVELTEACLAAVEGAGA-LNAFVHHTPDLARAQAQAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + GIP+GIKD F TKG+ +QA S IL GF P YESTV+Q L+D GAVMLG Sbjct: 60 ARIAKGDAPAMCGIPLGIKDLFCTKGVPSQAASRILQGFLPEYESTVSQNLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + + TPGGSSGGS++AVA LC + GTDT Sbjct: 120 KLNMDEFAMGSSNETSCYGNAVNPWRRGNDATELTPGGSSGGSASAVAADLCLGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG +T+TVRDSAI+L A+ G+D Sbjct: 180 GGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKTVRDSAIMLGAMCGFDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T ++PVPD+E L I+G +GIP+EYR++ + I+K W G L+ AGA+I Sbjct: 240 KDSTSADMPVPDFEALLTGDIRGKVIGIPREYRMEGMPAEIEKLWSDGADMLRHAGAEIR 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLAQGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RAR++R LIKRDF EAF GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARRVRALIKRDFDEAFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP ++VPA L + +PLGLQLIG+P+ E L + Sbjct: 420 -EMTDADPVQMYLNDVFTVTVNLAGLPGVAVPAGLNAQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YALEEAAGFVAKPAKWW 495 >gi|294678274|ref|YP_003578889.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodobacter capsulatus SB 1003] gi|294477094|gb|ADE86482.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacter capsulatus SB 1003] Length = 492 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 283/494 (57%), Positives = 373/494 (75%), Gaps = 8/494 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + ++ +RD L++ ++++VE+ ++ + I+ + + +NA+ + A A A+ +D R+ Sbjct: 3 LNKLTIAAARDALKAGEVTSVEITEACLAEIDAAGA-LNAFCAKTPEIALAQAKAADARL 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 GDA + GIP+GIKD F TKG+ +QA S IL+GF+P YESTVTQ LWD GAVMLGKL+ Sbjct: 62 KAGDAPAMCGIPLGIKDLFCTKGVASQAASRILEGFKPEYESTVTQNLWDAGAVMLGKLS 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNET+ YGPV+SPW+ D + TPGGSSGGS+AAVA LC A+ GTDTGGS Sbjct: 122 MDEFAMGSSNETACYGPVVSPWKVDDR--QLTPGGSSGGSAAAVAADLCLAATGTDTGGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FTG VGIKPTYGR SR G+++FA SLDQAG +T++VRD+AI+L +A D D+ Sbjct: 180 IRQPAAFTGIVGIKPTYGRVSRWGVVAFASSLDQAGPMTKSVRDAAIMLGTMASNDAKDS 239 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TC ++PVPD+E AL I+G +GIP+EYR++ + I+K W G + L+DAGA+IVEIS Sbjct: 240 TCADIPVPDFEAALTGDIRGKKIGIPREYRMEGMPAEIEKLWSDGAAMLRDAGAEIVEIS 299 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVK 360 LPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G+ I++MYE TR+ GFG EV+ Sbjct: 300 LPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRATLSAGEGIVDMYEKTRAEGFGPEVQ 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++Y RAR++R LIK+DF +AF G+D ILTP TP+SAF LG E Sbjct: 360 RRIMIGTYVLSAGFYDAYYNRARRVRALIKQDFDQAFAAGIDSILTPATPSSAFGLG-EM 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + NDVFTV VN+AGLP ISVP L K +P+GLQLIG+P+ E L + ++ Sbjct: 419 KDADPVEMYLNDVFTVTVNLAGLPGISVPVGLDAKGLPMGLQLIGRPWEEGDLLNQALVL 478 Query: 481 EKEAGY-FRPHKWW 493 EK AG+ +P KWW Sbjct: 479 EKAAGFAAKPAKWW 492 >gi|209964818|ref|YP_002297733.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Rhodospirillum centenum SW] gi|229486002|sp|B6IN23|GATA_RHOCS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|209958284|gb|ACI98920.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Rhodospirillum centenum SW] Length = 521 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 272/516 (52%), Positives = 358/516 (69%), Gaps = 35/516 (6%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M LN + ++E+ LR+ + +A EL +++++A+E + +N +I A A A+ +D Sbjct: 1 MMSLNHLTMAEALAGLRAGEFTATELTEAHLRAVEATRG-LNIFITETADIALRQAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G A ++G+PI +KD F T+G+ T A SHILDGF+P YES+VT LW +GAVMLG Sbjct: 60 ERYAAGTALPMDGLPIAVKDLFCTEGVLTTAASHILDGFKPPYESSVTANLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI---- 176 K+N+DEFAMGS+N TSYYGPVISPW + SG S F + Sbjct: 120 KVNLDEFAMGSANITSYYGPVISPWSKGRRVQRDAAPAGSGVLSEVAEAFRQPQPVTEWE 179 Query: 177 ---------------------------GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 GTDTGGSIRQPASF G VG+KPTYGRCSR GI+ Sbjct: 180 WERRLVPGGSSGGSAAAVAARVAMAATGTDTGGSIRQPASFVGIVGLKPTYGRCSRWGIV 239 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 +FA SLDQAG +TRTVRD+AI+L+++AG+D D+T ++PVPDYE+A+ I+G+ VGIP Sbjct: 240 AFASSLDQAGPMTRTVRDAAIMLRSMAGFDPKDSTSADVPVPDYEKAITGDIRGLRVGIP 299 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 +EYR+D + ID+ WQQG+ WLK AGA VEISLPHT+YALPAYYI++PAEASSNLARY Sbjct: 300 REYRVDGMPAEIDRLWQQGVEWLKAAGAVPVEISLPHTKYALPAYYIVAPAEASSNLARY 359 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 DGVR+GLRVEGKD+ EMYENTR GFG+EV+ RI+IGTYVLS+ YD++YL+A+K+R I Sbjct: 360 DGVRFGLRVEGKDLKEMYENTRGEGFGREVRRRILIGTYVLSAGYYDAYYLKAQKVRARI 419 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 DFT+A+EQ DVILTPT P +AF +G++ ++ +M NDVFTV N+AGLP +SVP Sbjct: 420 AEDFTKAWEQ-CDVILTPTAPNTAFGIGEKMDDPIAM--YLNDVFTVPANLAGLPGLSVP 476 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 A L +PLGLQL+G+PF E TL ++E+ AG Sbjct: 477 AGLAANGLPLGLQLVGRPFDEATLIRTAAVLEQAAG 512 >gi|114799311|ref|YP_760988.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Hyphomonas neptunium ATCC 15444] gi|123027879|sp|Q0BZV5|GATA_HYPNA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|114739485|gb|ABI77610.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hyphomonas neptunium ATCC 15444] Length = 490 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 279/494 (56%), Positives = 359/494 (72%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++ + D L+SK S+ E+ +++QA+E S +NAY+ +KA A SD Sbjct: 1 MTDLTDLTLAAALDGLKSKQFSSAEITGAFLQAMEKSRV-LNAYVVETPEKAMEMARASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI G+ LEG P+GIKD + TKG+ T ACS+IL F P YESTVTQ LWD GAVMLG Sbjct: 60 ARIAKGEGGRLEGAPLGIKDLYCTKGVRTTACSNILGEFTPTYESTVTQNLWDEGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS +GP I+PWR TPGGSSGGS+AAV+G LC A+ +DT Sbjct: 120 KLNMDEFAMGSSNETSRFGPPINPWRRKGDNAGLTPGGSSGGSAAAVSGNLCLAATASDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTGTVGIKPTYGR SR G+++FA SLDQAG I +TV DSA+LL+ + +D Sbjct: 180 GGSIRQPASFTGTVGIKPTYGRASRYGMVAFASSLDQAGPIAKTVEDSALLLEIMCSHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + + PD+ + + ++GM +GIPKEYR++ LS I+ WQQGI+WLK AGA+IV Sbjct: 240 KDSTSLKVETPDWRSDVRKGVKGMKIGIPKEYRIEGLSEEIEALWQQGIAWLKAAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT+YALPAYYI++PAEASSNLARYDG+RYG RVEG ++ + YE +R+ GFG+EV+ Sbjct: 300 EISLPHTKYALPAYYIVAPAEASSNLARYDGMRYGARVEGNNLTQTYEASRASGFGKEVQ 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+MIGTYVLSS YD++YLRA+K+R I +DF AFEQ D ILTP P++AF G++ Sbjct: 360 RRLMIGTYVLSSGYYDAYYLRAQKVRAKIFQDFVGAFEQ-CDAILTPACPSTAFAFGEKS 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M DVFTV N+AGLP ISVPA L +PLGLQ+IG+ E F VG ++ Sbjct: 419 GDPLEM--YLMDVFTVTANLAGLPGISVPAGLSASGLPLGLQVIGKALDESACFRVGGVL 476 Query: 481 EKEAGYF-RPHKWW 493 E A + +P +WW Sbjct: 477 EDAASFVAKPDRWW 490 >gi|294084179|ref|YP_003550937.1| glutamyl-tRNA amidotransferase subunit A [Candidatus Puniceispirillum marinum IMCC1322] gi|292663752|gb|ADE38853.1| glutamyl-tRNA amidotransferase subunit A [Candidatus Puniceispirillum marinum IMCC1322] Length = 492 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 274/484 (56%), Positives = 361/484 (74%), Gaps = 5/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L ++ E+R L +KDIS+VEL +YIQA E++ S +N+Y+ + A KA A ++D Sbjct: 1 MQDLLALSAVEARAALDAKDISSVELTSAYIQAAEDTAS-LNSYVLLTADKALDMASDAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KR+ G+ LEG+PIG+KD F TKG+ + ACS ILDGF P YESTVT +W G VMLG Sbjct: 60 KRMAAGNGGVLEGLPIGVKDMFCTKGVTSTACSKILDGFTPVYESTVTANMWAQGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGS+NETS+ GPVI+PW + D D PGGSSGGS+++VA S+GTDT Sbjct: 120 KLNCDEFAMGSANETSFAGPVINPWDAGDGVD-LVPGGSSGGSASSVAARSALLSVGTDT 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G VG+KPTYGRCSR GI++FA SLDQAG +R V D+A+LL A+A +D Sbjct: 179 GGSIRQPASFCGIVGLKPTYGRCSRWGIVAFASSLDQAGPFSRDVADNALLLSAMASHDA 238 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T P+ D A++ ++GM +GIP+EYR+D + ++K WQQG WLKDAGA++V Sbjct: 239 KDSTSAATPLQDVVAAVNAGVKGMKIGIPREYRMDGMDSDVEKLWQQGQEWLKDAGAELV 298 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYII+PAEASSNLARYDGVRYG R+E + EMY TR+ GFG EV+ Sbjct: 299 DISLPHTKYALPAYYIIAPAEASSNLARYDGVRYGNRIEADSLDEMYGLTRAEGFGDEVQ 358 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YL+A+++R LIK DF EAF VD ILTP TP++AFP+G++ Sbjct: 359 RRIMIGTYVLSAGYYDAYYLKAQRVRRLIKNDFDEAFAT-VDAILTPATPSAAFPVGRKV 417 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + + NDVFTV N+AGLP +SVPA + +PLGLQ++ +PF E +++ VG++I Sbjct: 418 DD--PVINYLNDVFTVPANLAGLPGMSVPAGFNQAGLPLGLQVLAKPFDEASIYKVGKVI 475 Query: 481 EKEA 484 E A Sbjct: 476 EDSA 479 >gi|84515291|ref|ZP_01002653.1| glutamyl-tRNA amidotransferase subunit A [Loktanella vestfoldensis SKA53] gi|84510574|gb|EAQ07029.1| glutamyl-tRNA amidotransferase subunit A [Loktanella vestfoldensis SKA53] Length = 493 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 282/497 (56%), Positives = 369/497 (74%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++ +RD +R D+++ E+ + + AIE +++ + A++ + A A A+ +D Sbjct: 1 MSDLTKLTIAGARDAMRKGDVTSAEITQACLTAIEGADA-LGAFVHKTPEIALAQAQAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA + GIP+GIKD F TKG+ +QA S IL+GF+P YESTVT KL+D GAVMLG Sbjct: 60 ARIKAGDAPAMCGIPLGIKDLFCTKGVPSQAASRILEGFKPEYESTVTGKLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YGP I+PW+ D TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGPAINPWKVDDR--NLTPGGSSGGSASAVAADLCLAATGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG G+KPTYGR SR GI++FA SLDQAG +T+ VRD AI+L+A+ G+D Sbjct: 178 GGSIRQPAAFTGITGLKPTYGRVSRWGIVAFASSLDQAGPMTKDVRDCAIMLQAMCGHDA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVPD+E AL I+G T+GIP+EYR+D I+K W G + L+DAGAKIV Sbjct: 238 RDSTSADLPVPDFEAALTGDIKGKTIGIPREYRMDGTPAEIEKLWSDGTAMLRDAGAKIV 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I +MYE TR+ GFG Sbjct: 298 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLGAGDGITQMYEKTRAEGFGP 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RAR++RTLIKRDF +AF GVD ILTP TP++AF +G Sbjct: 358 EVQRRVMVGTYVLSAGFYDAYYNRARRVRTLIKRDFDDAFAAGVDAILTPATPSAAFGIG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I+VP + +PLGLQLIG+P+ E L ++ Sbjct: 418 -EMADADPIKMYLNDVFTVTVNLAGLPGIAVPTGRDAQGLPLGLQLIGRPWEEAELLNIA 476 Query: 478 QIIEKEAGYF-RPHKWW 493 +E AG+ +P KWW Sbjct: 477 YRLETAAGFVAKPAKWW 493 >gi|119383328|ref|YP_914384.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Paracoccus denitrificans PD1222] gi|119373095|gb|ABL68688.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Paracoccus denitrificans PD1222] Length = 493 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 285/497 (57%), Positives = 367/497 (73%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++ +RD LR D ++ EL ++ + AIE + + +NA+ +KAR A +D Sbjct: 1 MSDLNKLTIAAARDGLRKGDFTSAELTETCLVAIEAAGA-LNAWCHKTPEKAREMAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KRI GDA + GIP+GIKD F T+ + +QA S ILDGF P YESTVTQ LWD GAVMLG Sbjct: 60 KRIAAGDAPAMCGIPLGIKDLFCTRDVPSQAASRILDGFLPQYESTVTQNLWDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+MDEFAMGSSNE++ YGPV++PW+ D + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLSMDEFAMGSSNESACYGPVVNPWKVDDR--QLTPGGSSGGSAAAVAADLCLAATGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVG+KPTYGR SR G+I+FA SLDQAG +T+TVRD+AI+L A+A D Sbjct: 178 GGSIRQPAAFTGTVGLKPTYGRVSRWGVIAFASSLDQAGPMTKTVRDAAIMLGAMASVDA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPDYE AL I+G +GIP+EYR++ +S ID W + L+DAGA++V Sbjct: 238 KDSTSAERAVPDYEAALTGDIRGRRIGIPREYRMEGMSDEIDALWHKAAEMLRDAGAEVV 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +I+LPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G ++EMYE TR+ GFG Sbjct: 298 DITLPHTKYALPAYYVIAPAEASSNLARYDGVRYGRRARLGAGDGVVEMYEKTRAEGFGP 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RARK+R LIKRDF + F G+D ILTP TP++AF LG Sbjct: 358 EVQRRVMIGTYVLSAGFYDAYYNRARKVRALIKRDFDQVFADGIDAILTPATPSAAFGLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP ISVP L + +PLG+QLIG+P+ E L ++ Sbjct: 418 -EMSGKDPVEMYLNDVFTVTVNLAGLPGISVPVGLDRQGLPLGMQLIGRPWDEGGLLNLA 476 Query: 478 QIIEKEAGYF-RPHKWW 493 Q +E AG+ +P +WW Sbjct: 477 QSLESAAGFTAKPSRWW 493 >gi|86140021|ref|ZP_01058585.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. MED193] gi|85823271|gb|EAQ43482.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. MED193] Length = 495 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 280/497 (56%), Positives = 370/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++E+RD LR D ++VEL ++ + AI+ ++ +NA++ + A A +D Sbjct: 1 MSDLNKLGLAEARDALRKGDTTSVELTEACLSAIDKADV-LNAFVHKTPEIALERAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ GDA + G+PIGIKD F TKG+ +QA S IL+GF P YESTV+Q+L DNGAVMLG Sbjct: 60 ARLKQGDAPAMCGLPIGIKDLFCTKGVASQAASKILEGFVPEYESTVSQQLADNGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG +SPWR + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSTYGNAVSPWRRGNDDAALTPGGSSGGSAAAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G+++FA SLDQAG +T++VRD+AI+L+A++G+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPMTKSVRDAAIMLEAMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VP++E L I+G +GIPKEY ++ + I+K W +G + LK AGA+IV Sbjct: 240 KDSTSADLAVPNFEAMLTGDIRGKKIGIPKEYHMEGMPAEIEKLWSEGTAMLKAAGAQIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQ 357 +ISLPHT+YALPAYY+I+PAEASSNLARYDGVRYG R G I EMYE TR+ GFG Sbjct: 300 DISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGNRATLEAGDGITEMYEKTRAQGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R+M+GTYVLS+ YD++Y RAR++R+LIK+DF F G+D ILTP TP++AF LG Sbjct: 360 EVKRRVMVGTYVLSAGFYDAYYNRARRVRSLIKQDFENVFAAGIDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E +++ + DVFTV VN+AGLP I++PA + + +PLGLQLIG+P+ E L + Sbjct: 420 -EMSDADPVAMYLLDVFTVTVNLAGLPGIALPAGVDSQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ G+ +P KWW Sbjct: 479 YALEQSTGFVAKPGKWW 495 >gi|146278262|ref|YP_001168421.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodobacter sphaeroides ATCC 17025] gi|166217707|sp|A4WUQ2|GATA_RHOS5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|145556503|gb|ABP71116.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodobacter sphaeroides ATCC 17025] Length = 491 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 284/493 (57%), Positives = 366/493 (74%), Gaps = 9/493 (1%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N + ++E+RD L ++SAV+L + + AI ++ + +NA++ + + A A SD R Sbjct: 4 NELTIAEARDALAKGELSAVDLTMACLTAI-DAGTPLNAFVHLTPEIALDQARASDARRG 62 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G A L GIP+GIKD F T+G+ +QA S+IL GF+P YESTVT KL+ GAVMLGKLNM Sbjct: 63 EG-AGALNGIPLGIKDLFCTRGVASQAASNILKGFKPEYESTVTSKLFAAGAVMLGKLNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNETS YG ++PW+ D K TPGGSSGGS+AAVA LC + GTDTGGSI Sbjct: 122 DEFAMGSSNETSCYGDAVNPWKVDDR--KLTPGGSSGGSAAAVAADLCLGATGTDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTG VGIKPTYGR SR GI++FA SLDQAG +T+TVRD+AILL A+AG+D D+T Sbjct: 180 RQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKTVRDAAILLGAMAGHDPKDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++PVPD+E AL I+G +GIP+EYR++ + I+ W +G L DAGA+IV+ISL Sbjct: 240 SADIPVPDFEAALTGDIRGKKIGIPREYRMEGMPAEIEALWAKGREMLADAGAEIVDISL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKH 361 PHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I++MYE TR+ GFG+EV+ Sbjct: 300 PHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKLGQGDGIVDMYEKTRAEGFGKEVQR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+MIGTYVLS+ YD++Y RARK+R LIKRDF + F +G+D ILTP TP+SAF LG E Sbjct: 360 RVMIGTYVLSAGFYDAYYNRARKVRALIKRDFDQVFAEGIDAILTPATPSSAFGLG-EMA 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + NDVFTV VN+AGLP ISVP L K +PLGLQLIG+P+ E L + ++E Sbjct: 419 HADPVEMYLNDVFTVTVNLAGLPGISVPVGLDAKGLPLGLQLIGRPWDEAGLLNHAHVLE 478 Query: 482 KEAGYF-RPHKWW 493 + AG+ +P KWW Sbjct: 479 QAAGFVEKPRKWW 491 >gi|126735090|ref|ZP_01750836.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. CCS2] gi|126715645|gb|EBA12510.1| glutamyl-tRNA amidotransferase subunit A [Roseobacter sp. CCS2] Length = 495 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/497 (55%), Positives = 368/497 (74%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++++RD +R + S+ E+ + + AI +++ + A++ A+A A +D Sbjct: 1 MSDLTKLTIAQARDAMRKGETSSAEITSACLAAIAGADA-LGAFVHHTPDIAQAQAAAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI GDA D+ GIP+GIKD F TKG+ +QA S IL+GF+P YEST+T +L+D GAVMLG Sbjct: 60 TRIKAGDAPDMCGIPLGIKDLFCTKGVPSQAASRILEGFKPEYESTITSQLFDAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PW+ + + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSVYGNAVNPWKRDGDSVELTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G G+KPTYGR SR GI++FA SLDQAG +T+ VRD+AI+L A++G+D Sbjct: 180 GGSIRQPAAFVGITGMKPTYGRVSRWGIVAFASSLDQAGPMTKDVRDAAIMLSAMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVPD+E AL I+G T+GIPKEYR+D + I++ W G + LKDAGAKIV Sbjct: 240 LDSTSADLPVPDFEAALTGDIRGKTIGIPKEYRMDGMPAEIEQLWADGTAMLKDAGAKIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +I+LPHT+YALPAYY+I+PAEASSNLARYDGVR+G R +G I EMYE TR+ GFG Sbjct: 300 DITLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLAQGDGITEMYEKTRAEGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+M+GTYVLS+ YD++Y RAR++R LIK+DF F GVD ILTP TP++AF LG Sbjct: 360 EVQRRVMVGTYVLSAGFYDAYYNRARRVRALIKQDFDTVFADGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I+VP ++ +PLGLQLIG+P+ E L +V Sbjct: 420 -EMADADPIQMYLNDVFTVTVNLAGLPGIAVPTGQDKQGLPLGLQLIGRPWEEGELLNVA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 YSLEQSAGFVAKPAKWW 495 >gi|56697805|ref|YP_168176.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ruegeria pomeroyi DSS-3] gi|81558360|sp|Q5LP80|GATA_SILPO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56679542|gb|AAV96208.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ruegeria pomeroyi DSS-3] Length = 496 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/498 (55%), Positives = 366/498 (73%), Gaps = 7/498 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+LN + ++++RD LR + ++V L ++ + AIE + + +NA++ + A A+ +D Sbjct: 1 MSDLNTLTLAQARDALRKGETTSVALTEACLAAIEGAGA-LNAFVHKTPELALERAKAAD 59 Query: 61 KRIIN-GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R+ +A + G+PIGIKD F TKG+ +QA S IL+GF+P YESTV+Q+L D GAVML Sbjct: 60 ERLQGREEAPKMCGLPIGIKDLFCTKGVPSQAASRILEGFKPEYESTVSQQLADAGAVML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS+AAVA LC A+ GTD Sbjct: 120 GKLNMDEFAMGSSNETSCYGNAVNPWRRGNDDAALTPGGSSGGSAAAVAADLCLAATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G GIKPTYGRCSR GI++FA SLDQAG +T+ VRD+AI+L+A+ G+D Sbjct: 180 TGGSIRQPAAFVGITGIKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDAAIMLEAMCGHD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T L VPD+E L I+G +GIP+EYR+D + I+ WQQG L+ AGA+I Sbjct: 240 PKDSTSAELAVPDFEAMLTGDIRGKVIGIPREYRMDGMPEEIEALWQQGTEMLRAAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFG 356 +ISLPHT+YALP YY+I+PAEASSNLARYDGVRYG R +G I EMYE TR+ GFG Sbjct: 300 RDISLPHTKYALPTYYVIAPAEASSNLARYDGVRYGHRAKLAQGDGITEMYEKTRAEGFG 359 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EV+ R+M+GTYVLS+ YD++Y RARK+R+LIK+DF + F GVD ILTP TP++AF L Sbjct: 360 HEVQRRVMVGTYVLSAGFYDAYYNRARKVRSLIKKDFEDVFAAGVDAILTPATPSAAFGL 419 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G E ++ + NDVFTV VN+AGLP +SVPA L ++ +PLGLQLIG+P+ E L + Sbjct: 420 G-EMTDADPVQMYLNDVFTVTVNLAGLPGVSVPAGLDKQGLPLGLQLIGRPWEEGDLLNT 478 Query: 477 GQIIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 479 AYALEQAAGFVAKPSKWW 496 >gi|163792876|ref|ZP_02186852.1| DNA polymerase IV [alpha proteobacterium BAL199] gi|159181522|gb|EDP66034.1| DNA polymerase IV [alpha proteobacterium BAL199] Length = 493 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/476 (57%), Positives = 361/476 (75%), Gaps = 5/476 (1%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 +RD LR+++IS+ EL +Y+ IE + + +NAYI V A KA+A A+ SD+R+ G+ L Sbjct: 12 ARDALRAREISSTELTSAYLSRIE-ATADLNAYITVTADKAQAMAKASDERLAKGEGGGL 70 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+PI +KD F T+G+ T A SHILDGF+P YESTVT LW GAVMLGK N+DEFAMGS Sbjct: 71 EGLPIAVKDLFCTEGVLTTAASHILDGFKPTYESTVTGNLWSAGAVMLGKTNLDEFAMGS 130 Query: 132 SNETSYYGPVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ TSYYGP ++PWR + DS + PGGSSGGS+AAV+G+ A+ GTDTGGSIRQPAS Sbjct: 131 SSATSYYGPPVNPWRGAQDSETRLVPGGSSGGSAAAVSGWAALAATGTDTGGSIRQPASL 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TG VG+KP+YGRCSR GI++FA SLDQAG +TRTV D+A++L A+AG+D D+T P+ Sbjct: 191 TGIVGMKPSYGRCSRWGIVAFASSLDQAGPMTRTVHDAAVMLSAMAGHDPKDSTSAAEPL 250 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 PD E LD ++G+ +G+P EYR+D + I + W +GI+WLKDAGA+I++ISLPHTQYA Sbjct: 251 PDLEATLDSGVKGLRIGVPAEYRVDGMPTEISEIWAKGIAWLKDAGAEIIDISLPHTQYA 310 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 L YYII+PAEASSNLARYDGVRYGLRV+G + EMY NTR GFG EV+ R++IGTYVL Sbjct: 311 LATYYIIAPAEASSNLARYDGVRYGLRVDGGSLDEMYANTRGEGFGAEVQRRVLIGTYVL 370 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S+ YD++Y +A+++RTLI+RDF EAF + VD ILTPT P+ AF +G E++ M Sbjct: 371 SAGYYDAYYRKAQRVRTLIRRDFDEAFGK-VDAILTPTAPSDAFAIGANEDDPVKM--YL 427 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 NDVFTV ++AGLP +SVPA L + +PLGLQ++G+ F E + VG+ IEK A + Sbjct: 428 NDVFTVPASLAGLPGLSVPAGLSARGLPLGLQVLGRMFDEPMVLRVGRAIEKAATF 483 >gi|260574592|ref|ZP_05842595.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacter sp. SW2] gi|259023009|gb|EEW26302.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacter sp. SW2] Length = 493 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 285/497 (57%), Positives = 366/497 (73%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M N + ++ +RD LR D++AV+L + + AI+ + + A++ + A A +D Sbjct: 1 MMGANKLTIAAARDALRKGDLTAVDLTMACLTAIDAGDG-LGAFVHKTPEIALEQARAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+A L GIP+GIKD F TKG+ +QA S+IL GF+P YESTVT +L+ GAVMLG Sbjct: 60 ARLAAGNAPSLCGIPLGIKDLFCTKGVASQAASNILKGFKPEYESTVTAQLFGAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YGPV++PWR D + TPGGSSGGS+AAVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSCYGPVVNPWRCDDR--ELTPGGSSGGSAAAVAADLCLAATGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VGIKPTYGR SR GI++FA SLDQAG +T+TVRD+AI+L +AG+D Sbjct: 178 GGSIRQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKTVRDAAIMLGCMAGHDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIP+EYR+D + I+K W G + L+DAGA+IV Sbjct: 238 KDSTSADLAVPDFEAALTGDIRGRRIGIPREYRMDGMPAEIEKLWAAGTAMLRDAGAEIV 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +ISLPHT+YALP YY+++PAEASSNLARYDGVRYG R + G I EMYE TR+ GFG Sbjct: 298 DISLPHTKYALPTYYVVAPAEASSNLARYDGVRYGHRAKLAAGDGITEMYEKTRAEGFGA 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ R+MIGTYVLS+ YD++Y RARK+R LIKRDF +AF GVD ILTP TP++AF LG Sbjct: 358 EVQRRVMIGTYVLSAGFYDAYYNRARKVRALIKRDFEQAFAAGVDAILTPATPSAAFGLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N+ + NDVFTV VN+AGLP I+VP L + +PLGLQLIG+P+ E L + Sbjct: 418 -EMANASPVEMYLNDVFTVTVNLAGLPGIAVPVGLDAQGLPLGLQLIGRPWEEGDLLNHA 476 Query: 478 QIIEKEAGYF-RPHKWW 493 ++E+ AG+ +P KWW Sbjct: 477 YVLERAAGFVAKPEKWW 493 >gi|332557710|ref|ZP_08412032.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodobacter sphaeroides WS8N] gi|332275422|gb|EGJ20737.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodobacter sphaeroides WS8N] Length = 491 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 283/493 (57%), Positives = 365/493 (74%), Gaps = 9/493 (1%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N + ++E+RD L ++SAV+L + + AI+ + + +NA++ + A A +D Sbjct: 4 NELTIAEARDALGRGELSAVDLTMACLTAID-AGTPLNAFVHATPEIALDQARAADA-CR 61 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A L GIP+GIKD F T+G+ +QA S+IL GF+P YESTVT KL++ GAVMLGKLNM Sbjct: 62 GAGAGALNGIPLGIKDLFCTRGVASQAASNILKGFKPEYESTVTSKLFEAGAVMLGKLNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNETS YG ++PW+ D + TPGGSSGGS+AAVA LC A+ GTDTGGSI Sbjct: 122 DEFAMGSSNETSCYGDAVNPWKVDDR--RLTPGGSSGGSAAAVAADLCLAATGTDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTG VGIKPTYGR SR GI++FA SLDQAG +T++VRD+AILL A+AG+D D+T Sbjct: 180 RQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++PVPD+E AL I+G +GIP+EYR++ + I+ W +G L DAGA+IV+ISL Sbjct: 240 SADIPVPDFEAALTGDIRGRKIGIPREYRMEGMPAEIEALWARGREMLADAGAEIVDISL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKH 361 PHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I++MYE TR+ GFG+EV+ Sbjct: 300 PHTKYALPAYYVIAPAEASSNLARYDGVRYGHRARLGQGDGIVDMYEKTRAEGFGKEVQR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+MIGTYVLS+ YD++Y RARK+R LIKRDF EAF GVD ILTP TP+SAF LG E Sbjct: 360 RVMIGTYVLSAGFYDAYYNRARKVRALIKRDFDEAFAAGVDAILTPATPSSAFGLG-EMA 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + NDVFTV VN+AGLP ISVP L K +PLGLQLIG+P+ E L + ++E Sbjct: 419 DADPVAMYLNDVFTVTVNLAGLPGISVPVGLDAKGLPLGLQLIGRPWDEAGLLNHAHVLE 478 Query: 482 KEAGYF-RPHKWW 493 + AG+ +P KWW Sbjct: 479 RAAGFVEKPRKWW 491 >gi|254441795|ref|ZP_05055288.1| Amidase, putative [Octadecabacter antarcticus 307] gi|198251873|gb|EDY76188.1| Amidase, putative [Octadecabacter antarcticus 307] Length = 492 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 278/497 (55%), Positives = 363/497 (73%), Gaps = 9/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+ M +SE+RD L+ D+++VEL ++ + IE SN+ +NA++ + A + + Sbjct: 1 MSDLSKMKISEARDALKKGDVTSVELTEACLSEIEKSNA-LNAFVH---ETPELAMDMAR 56 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 N DL GIP+GIKD F TKG+ +QA S IL GF+P YESTVT +L+ GAVMLG Sbjct: 57 AADANKQGGDLNGIPLGIKDLFCTKGVLSQAASGILAGFKPEYESTVTTQLFAGGAVMLG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PW+ + + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 117 KLNMDEFAMGSSNETSVYGDAVNPWKRGNDDAQLTPGGSSGGSASAVAADLCLAATGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G GIKPTYGR SR GI++FA SLDQAG +T+ VRD+AI+L+A++G+D Sbjct: 177 GGSIRQPAAFAGITGIKPTYGRVSRWGIVAFASSLDQAGPMTKDVRDAAIMLRAMSGHDP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIPKEYR+D + I K W+ G + LKDAGA+I Sbjct: 237 KDSTSADLAVPDFEAALTGDIRGKVIGIPKEYRMDGMPEEIAKLWEDGTAMLKDAGAEIR 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +I+LPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG Sbjct: 297 DITLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLDAGDGITEMYEKTRAEGFGS 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R+MIGTYVLS+ YD++Y RARK+R LIKRDF F G+D ILTP TP++AF LG Sbjct: 357 EVKRRVMIGTYVLSAGFYDAYYNRARKVRALIKRDFESVFADGIDAILTPATPSAAFGLG 416 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I+VPA L + +PLGLQLIG+P+ E L + Sbjct: 417 -EMADADPVQMYLNDVFTVTVNLAGLPGIAVPAGLDKDGLPLGLQLIGRPWEEGDLLNTA 475 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ A + +P++WW Sbjct: 476 YTLERAAQFVAKPNRWW 492 >gi|254452925|ref|ZP_05066362.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Octadecabacter antarcticus 238] gi|198267331|gb|EDY91601.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Octadecabacter antarcticus 238] Length = 492 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/497 (55%), Positives = 363/497 (73%), Gaps = 9/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+ + +SE+RD L+ D+++VEL + + IE + + +NA++ + A + + Sbjct: 1 MSDLSKLKISEARDALKKGDVTSVELTQACLSEIEKAGA-LNAFVH---KTPELAMDMAR 56 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 N D D+ GIP+GIKD F TKG+ +QA S IL GF+P YESTVT +L+ GAVMLG Sbjct: 57 AADANKDGGDMNGIPLGIKDLFCTKGVPSQAASGILAGFKPEYESTVTSQLFAGGAVMLG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PW+ + + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 117 KLNMDEFAMGSSNETSVYGNAVNPWKRGNDAAELTPGGSSGGSASAVAADLCLAATGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G GIKPTYGR SR GI++FA SLDQAG +T+ VRD+AI+L+A++G+D Sbjct: 177 GGSIRQPAAFVGITGIKPTYGRVSRWGIVAFASSLDQAGPMTKDVRDAAIMLRAMSGHDP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +L VPD+E AL I+G +GIPKEYR+D +S I+K W G + LKDAGA+I Sbjct: 237 KDSTSADLAVPDFESALTGDIRGKVIGIPKEYRMDGMSSEIEKLWADGTAMLKDAGAEIR 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSIGFGQ 357 +I+LPHT+YALPAYY+I+PAEASSNLARYDGVR+G R + G I EMYE TR+ GFG Sbjct: 297 DITLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLDAGDGITEMYEKTRAEGFGS 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R+MIGTYVLS+ YD++Y RARK+R LIKRDF F G+D ILTP TP++AF LG Sbjct: 357 EVKRRVMIGTYVLSAGFYDAYYNRARKVRALIKRDFENVFADGIDAILTPATPSAAFGLG 416 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV VN+AGLP I+VPA L + +PLGLQLIG+P+ E L + Sbjct: 417 -EMTDADPVQMYLNDVFTVTVNLAGLPGIAVPAGLDKNGLPLGLQLIGRPWEEGDLLNTA 475 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ A + +P++WW Sbjct: 476 YTLERAAQFVAKPNRWW 492 >gi|103486331|ref|YP_615892.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sphingopyxis alaskensis RB2256] gi|123253434|sp|Q1GUW3|GATA_SPHAL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|98976408|gb|ABF52559.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sphingopyxis alaskensis RB2256] Length = 493 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 287/497 (57%), Positives = 363/497 (73%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + V++ RD R+ D SAVE+ +++ + + + +NA+I A AA+ +D Sbjct: 1 MTELTNLTVAQIRDGHRAGDFSAVEVAEAFNANVAAAKA-LNAFIVETPDLAIEAAKAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G + L G+PIG+KD F T G+ T A SH+L+GF P YESTV+QKLWD GA MLG Sbjct: 60 ADRAAGTLKPLSGVPIGMKDLFCTNGVQTTAASHMLEGFVPRYESTVSQKLWDAGAGMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN+D+FAMGSSNETSY+G VISPWR D + PGGSSGGSSAA+A LC A+ GTD Sbjct: 120 KLNLDQFAMGSSNETSYFGNVISPWRRNDGGNAALAPGGSSGGSSAAIAARLCPAATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + RTVRD AI+L+ +AG+D Sbjct: 180 TGGSIRQPAAFTGISGIKPTYGRCSRWGIVAFASSLDQAGPMARTVRDCAIMLENMAGFD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT ++LPVP++E AL ++G TVGIP+EYRL+ + P ID W GI+ LKDA A + Sbjct: 240 PKDATSLDLPVPNWEAALSSDLRGKTVGIPREYRLEGIDPDIDAMWDAGIAMLKDAEAAV 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 VEISLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR +G + +MY TR+ GFG Sbjct: 300 VEISLPHTKYALPAYYIIAPAEASSNLARYDGVRYGLRDLPQGAGLQDMYAATRAEGFGA 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLS+ YD++Y +A+K+RTLI RDF AF DVIL PT P++AF LG Sbjct: 360 EVKRRIMIGTYVLSAGFYDAYYTQAQKVRTLIARDFEAAFGS-CDVILAPTAPSAAFGLG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVF V ++AGLPA+SVPAAL + +PLGLQ+IG+PF E+ + + G Sbjct: 419 --EKMADPLAMYLNDVFAVPASLAGLPAMSVPAALNREGLPLGLQIIGKPFDEQGVLNAG 476 Query: 478 QIIEKEAGY-FRPHKWW 493 IE+ AG+ R KWW Sbjct: 477 LAIEERAGFTARAEKWW 493 >gi|159045325|ref|YP_001534119.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dinoroseobacter shibae DFL 12] gi|189045248|sp|A8LJ23|GATA_DINSH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157913085|gb|ABV94518.1| glutamyl-tRNA(Gln) amidotransferase [Dinoroseobacter shibae DFL 12] Length = 495 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 281/497 (56%), Positives = 367/497 (73%), Gaps = 6/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ + ++ +RD+LR+++I+A EL ++ + +E + + + A++ ARA AE +D Sbjct: 1 MSELSSLTIAAARDKLRAREITATELTEACLAEVEGAGA-LGAFVHNTPDLARAQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ GDA + GIP+GIKD F TKG+ +QA S IL GF+P YESTVT +L+ GAVMLG Sbjct: 60 ARLAAGDAPAMCGIPLGIKDLFCTKGVPSQAASAILGGFKPEYESTVTSQLFAAGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS YG ++PWR + TPGGSSGGS++AVA LC A+ GTDT Sbjct: 120 KLNMDEFAMGSSNETSTYGNAVNPWRRGNEDTALTPGGSSGGSASAVAADLCLAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G G+KPTYGRCSR GI++FA SLDQAG +T+ VRD AI+L A+AG+D Sbjct: 180 GGSIRQPAAFVGITGLKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDCAIMLGAMAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +LPVPD+E L I+G +GIPKEYR+D + I+ W +G L+DAGA++ Sbjct: 240 KDSTSADLPVPDFEAMLTGDIRGKVIGIPKEYRMDGMPEEIEALWSRGAEMLRDAGAELR 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQ 357 +I+LPHT+YALPAYY+I+PAEASSNLARYDGVR+G R +G I EMYE TR+ GFG Sbjct: 300 DITLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHRAKLAQGDGITEMYEKTRAEGFGH 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RIMIGTYVLS+ YD++Y RARK+R LIKRDF E F GVD ILTP TP++AF LG Sbjct: 360 EVQRRIMIGTYVLSAGFYDAYYNRARKVRALIKRDFDEVFAAGVDAILTPATPSAAFGLG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + NDVFTV VN+AGLP I+VPA L ++ +PLGLQLIG+P+ E L + Sbjct: 420 -EMAEADPVQMYLNDVFTVTVNLAGLPGIAVPAGLDKQGLPLGLQLIGRPWEEGDLLNTA 478 Query: 478 QIIEKEAGYF-RPHKWW 493 +E+ AG+ +P++WW Sbjct: 479 YALEQAAGFVAKPNRWW 495 >gi|288958766|ref|YP_003449107.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] gi|288911074|dbj|BAI72563.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] Length = 493 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 275/496 (55%), Positives = 354/496 (71%), Gaps = 25/496 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + ++ + D L KD +AVEL +++++A+E + N +I A A A+ SD Sbjct: 1 MTALTHLTMAGALDGLAKKDFTAVELAEAHVRAVE-AVRPFNIFITETPDAALAMAKASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G+A ++G+PI +KD F TKG+ T A S ILDGF+P YESTVT +LW +GAVMLG Sbjct: 60 ERRAKGEAGPMDGLPIAVKDLFCTKGVATTAGSRILDGFKPEYESTVTSQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA------- 173 K+N+DEFAMGS+ T++ G +SPW +PG VAG Sbjct: 120 KVNLDEFAMGSATITAHQGETVSPW---------SPGAPGAWDRRIVAGGSSGGSAAVIA 170 Query: 174 -----ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDS 228 + GTDTGGSIRQPA +TGTVGIKPTYGRCSR GI+++A SLDQAG +TRTV D+ Sbjct: 171 ARAALGATGTDTGGSIRQPAGYTGTVGIKPTYGRCSRWGIVAYASSLDQAGPMTRTVEDA 230 Query: 229 AILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 AI+L+++ G+D D+T VNLPVPD+ AL I+G+ VGIPKEYR + LS I W QG Sbjct: 231 AIMLRSMCGFDPKDSTSVNLPVPDFRAALTGDIRGLRVGIPKEYRAEGLSAEIAALWDQG 290 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 I+WLKDAGA+ VEISLPHT+YAL AYYII+PAEASSNLARYDGVRYGLRVEG ++ EMYE Sbjct: 291 IAWLKDAGAEPVEISLPHTKYALAAYYIIAPAEASSNLARYDGVRYGLRVEGGNLKEMYE 350 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 NTR GFG EV+ RI+IGTYVLS+ YD++Y +AR++RT IK+DF EAF+ DVILTPT Sbjct: 351 NTRGAGFGPEVRRRILIGTYVLSAGYYDAYYNKARQVRTRIKQDFDEAFKS-CDVILTPT 409 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P++ F +G++ ++ M I DVFTV VN+AGLPA+SVPA L +PLGLQLIG+PF Sbjct: 410 APSTPFAIGEKMDDPVQMYLI--DVFTVPVNLAGLPAMSVPAGLGADGLPLGLQLIGRPF 467 Query: 469 REETLFSVGQIIEKEA 484 EETL VGQ++E+ A Sbjct: 468 DEETLLRVGQVVERAA 483 >gi|302382951|ref|YP_003818774.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Brevundimonas subvibrioides ATCC 15264] gi|302193579|gb|ADL01151.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brevundimonas subvibrioides ATCC 15264] Length = 492 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 267/495 (53%), Positives = 363/495 (73%), Gaps = 5/495 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + + + D L++K S+ E+ +++ IE +N +NAY+EV A KA A SD Sbjct: 1 MSDLTQLTLKAAVDGLKTKAFSSEEITRAFVSNIEAANPTLNAYVEVTADKAMTMARASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI +GDA LEG P+GIKD F T+G+ T A S++L GF P YESTVT LW +GAVMLG Sbjct: 61 ARIASGDAGALEGAPLGIKDLFCTEGVQTTAGSNMLRGFVPPYESTVTANLWRDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS +GPV++PW+S S TPGGSSGGS++AVA LC A+ +DT Sbjct: 121 KLNMDEFAMGSSNETSAFGPVVNPWKSKASNADLTPGGSSGGSASAVAAELCLAATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G+++FA SLDQAG IT+TV D+A++L+++ +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRASRFGMVAFASSLDQAGPITKTVEDAALMLRSMCSFDV 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++P PD+ +++ QS++G+ +G+P+EY +D + I W QG+ WLKDAG +IV Sbjct: 241 KDSTSLDVPTPDWTQSVGQSVRGLRIGVPREYVVDGMPAEIQALWDQGVQWLKDAGCEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 +ISLPHT+YALP YYI++PAEASSNLARYDG+R+G R E + ++YE +R+ GFG EV Sbjct: 301 DISLPHTKYALPTYYIVAPAEASSNLARYDGMRFGHRAETASSLTDLYETSRAEGFGAEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K R++IG YVLS+ YD++Y+RA K+R I DF + + Q VD ILTP+TP++AF +G + Sbjct: 361 KRRLVIGAYVLSAGFYDAYYVRALKVRRRIAEDFDKVWGQ-VDAILTPSTPSAAFAVGDK 419 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + +M NDVFTV N+AGLP ISVPA L +PLGLQ+IG+ E T+F VG Sbjct: 420 QIDPVTM--YLNDVFTVTANLAGLPGISVPAGLDSNGLPLGLQVIGKALDEATVFRVGAA 477 Query: 480 IEKEAGYF-RPHKWW 493 +E+ AG + +WW Sbjct: 478 LEQAAGGVGKADRWW 492 >gi|326388345|ref|ZP_08209941.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Novosphingobium nitrogenifigens DSM 19370] gi|326207077|gb|EGD57898.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Novosphingobium nitrogenifigens DSM 19370] Length = 499 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 282/503 (56%), Positives = 365/503 (72%), Gaps = 14/503 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L ++ RD + D +A E+ ++ A+ +N +NA+I A AAA + D Sbjct: 1 MTNLTEFGIAAIRDGVVRGDFTATEVAQAFNAAVAEANPALNAFIVTTPDHALAAAAKVD 60 Query: 61 K-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + L G+PIG+KD FAT+G+ T A SHIL+GF P YESTV++KLW+ GA ML Sbjct: 61 SARAAGEELGKLAGVPIGMKDLFATEGVQTTAASHILEGFEPQYESTVSRKLWEAGAGML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWR------SMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GKLN+D+FAMGSSNETS +G VISPWR S+D T PGGSSGGSS+AVA + A Sbjct: 121 GKLNLDQFAMGSSNETSAFGNVISPWRRTGADGSVD-TAPLAPGGSSGGSSSAVAARIAA 179 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A+ GTDTGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + R VRD AI+L+ Sbjct: 180 AATGTDTGGSIRQPAAFTGISGIKPTYGRCSRWGIVAFASSLDQAGPMARDVRDCAIMLE 239 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 A+AG+D D+T +++PVP+++ L ++G +GIP+EYR+D + + K+W GI+WLK Sbjct: 240 AMAGFDPKDSTSLDMPVPEWDANLSDDLRGRKIGIPREYRIDGFNADVAKSWDDGIAWLK 299 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTR 351 DAGA+IV+I+LPHT+YALP YYII+PAEASSNLARYDGVRYGLR EG ++ EMY TR Sbjct: 300 DAGAEIVDINLPHTRYALPTYYIIAPAEASSNLARYDGVRYGLRELPEGANLQEMYAATR 359 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI+IGTYVLS+ YD++Y +A+K+RTLI RDF AF++ VDVILTPT PT Sbjct: 360 AAGFGAEVKRRILIGTYVLSAGFYDAYYTQAQKVRTLISRDFMNAFDE-VDVILTPTAPT 418 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 SAF LG E S + NDVF+V ++AGLPA+SVPA L +PLGL LIG+PF E+ Sbjct: 419 SAFALG--EKTSDPLEMYLNDVFSVPASLAGLPAMSVPAGLDRGGLPLGLHLIGRPFDEQ 476 Query: 472 TLFSVGQIIEKEAGY-FRPHKWW 493 + + G IE+ AG+ +P KWW Sbjct: 477 GVLNAGLAIERRAGFSAKPAKWW 499 >gi|109891954|sp|Q2W6Y6|GATA_MAGMM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 490 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 279/487 (57%), Positives = 358/487 (73%), Gaps = 5/487 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++E+RD L +AVEL D++I+A E + +NA+I A AA+ SD Sbjct: 1 MSKLTDLTMAEARDGLAKGAFTAVELTDAHIKATE-AQRHLNAFIVETPDLALEAAKASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G A ++G+PIGIKD F T+G+ T A SHIL+GF+P YESTV+ KL GA+ LG Sbjct: 60 ARRQAGTAGSMDGLPIGIKDLFCTEGVQTTAASHILEGFKPPYESTVSGKLKAAGAISLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN+DEFAMGSSN+TSY+G V +PW+ + D K PGGSSGGS+AAVA + + GTD Sbjct: 120 KLNLDEFAMGSSNQTSYFGAVENPWKKTSDPKAKLVPGGSSGGSAAAVAARMVLGATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G GIKPTYGRCSR GI++FA SLDQAG + RTVRD AI+L A+AG+D Sbjct: 180 TGGSIRQPAAFCGITGIKPTYGRCSRFGIVAFASSLDQAGPMARTVRDCAIMLGAMAGHD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T VN+ VPD+ERAL I+G+ VGIPKEYR D LS + K W +GI WLK AGA Sbjct: 240 PKDSTSVNMAVPDFERALTGDIRGLKVGIPKEYRPDGLSDEVAKVWDRGIEWLKAAGATP 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VEISLPHT+YAL YYII+PAE SSNLARYDG+RYGLRV GK + +MY+ +R+ GFG EV Sbjct: 300 VEISLPHTKYALATYYIIAPAECSSNLARYDGLRYGLRVPGKTLDDMYKKSRAAGFGAEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RI+IGTYVLS+ YD++Y +A+K+R LI DF +AFE VDVILTPT P++AF +G+ Sbjct: 360 RRRILIGTYVLSAGYYDAYYAKAQKVRRLIAEDFRKAFET-VDVILTPTAPSAAFGMGEG 418 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ +M NDVFT+ +MAGLP +S+PA L +PLGLQLIG+PF EET+F V + Sbjct: 419 TDDPVTM--WLNDVFTIPTSMAGLPGLSLPAGLSADGLPLGLQLIGRPFDEETVFRVAGV 476 Query: 480 IEKEAGY 486 +E A + Sbjct: 477 METAANF 483 >gi|89069144|ref|ZP_01156517.1| glutamyl-tRNA amidotransferase subunit A [Oceanicola granulosus HTCC2516] gi|89045317|gb|EAR51383.1| glutamyl-tRNA amidotransferase subunit A [Oceanicola granulosus HTCC2516] Length = 489 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 277/491 (56%), Positives = 363/491 (73%), Gaps = 6/491 (1%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E+RD LR +++++EL ++ + IE +++ +NA++ + AR A +D R+ G Sbjct: 1 MKIAEARDALRKGEVTSLELTEACLAEIEAADA-LNAFVHKTPELARERAAAADARLKAG 59 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 DA DL G+P+GIKD F T+G+ +QA S ILDGFRP YESTV+ +L D GAVMLGKLNMDE Sbjct: 60 DAPDLCGVPLGIKDLFCTEGVASQAASRILDGFRPEYESTVSAQLRDAGAVMLGKLNMDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNETS YG ++PWR + TPGGSSGGS+AAVA LC + GTDTGGSIRQ Sbjct: 120 FAMGSSNETSTYGDAVNPWRREGDEARLTPGGSSGGSAAAVAAGLCLGATGTDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+FTG G+KPTYGRCSR GII+FA SLDQAG + R VRD AI+L A++G+D D+T Sbjct: 180 PAAFTGITGLKPTYGRCSRWGIIAFASSLDQAGPMARDVRDCAIMLSAMSGHDSRDSTSA 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +LPVPD+E L I+G T+GIP+EYR++ + I+ W +G + L+DAGAK+V+ISLPH Sbjct: 240 DLPVPDFEAMLTGDIRGKTIGIPREYRMEGMPGEIEALWAEGRAMLEDAGAKVVDISLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQEVKHRI 363 T+YALPAYY+I+PAEASSNLARYDGVR+G R +G I +MYE TR+ GFG EV+ R+ Sbjct: 300 TKYALPAYYVIAPAEASSNLARYDGVRFGHRARLAQGDGITDMYEKTRAEGFGPEVQRRV 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTYVLS+ YD++Y RARK+R LIK+DF + F GVD ILTP TP++AF LG E +++ Sbjct: 360 MVGTYVLSAGFYDAYYNRARKVRALIKKDFDDVFADGVDAILTPATPSAAFGLG-EMSDA 418 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + NDVFTV VN+AGLP I+VP L +PLGLQLIG+P+ E L + +E+ Sbjct: 419 DPVQMYLNDVFTVTVNLAGLPGIAVPTGLDRAGLPLGLQLIGRPWEEGDLLNTAYALERA 478 Query: 484 AGYF-RPHKWW 493 A + RP KWW Sbjct: 479 ANFTSRPGKWW 489 >gi|221638690|ref|YP_002524952.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodobacter sphaeroides KD131] gi|254790401|sp|B9KPF8|GATA_RHOSK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|221159471|gb|ACM00451.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodobacter sphaeroides KD131] Length = 491 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 283/493 (57%), Positives = 365/493 (74%), Gaps = 9/493 (1%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N + ++E+RD L ++SAV+L + + AI+ + + +NA++ + A A +D R Sbjct: 4 NELTIAEARDALAKGELSAVDLTMACLTAID-AGTPLNAFVHATPEIALDQARAADARRG 62 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 L GIP+GIKD F T+G+ +QA S+IL GF+P YESTVT KL++ GAVMLGKLNM Sbjct: 63 AEAGA-LNGIPLGIKDLFCTRGVASQAASNILRGFKPEYESTVTSKLFEAGAVMLGKLNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNETS YG ++PW+ D + TPGGSSGGS+AAVA LC A+ GTDTGGSI Sbjct: 122 DEFAMGSSNETSCYGDAVNPWKVDDR--RLTPGGSSGGSAAAVAADLCLAATGTDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTG VGIKPTYGR SR GI++FA SLDQAG +T++VRD+AILL A+AG+D D+T Sbjct: 180 RQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++PVPD+E AL I+G +GIP+EYR++ + I+ W +G L DAGA+IV+ISL Sbjct: 240 SADIPVPDFEAALTGDIRGRKIGIPREYRMEGMPAEIEALWARGREMLADAGAEIVDISL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKH 361 PHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I++MYE TR+ GFG+EV+ Sbjct: 300 PHTKYALPAYYVIAPAEASSNLARYDGVRYGHRARLGQGDGIVDMYEKTRAEGFGKEVQR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+MIGTYVLS+ YD++Y RARK+R LIKRDF EAF GVD ILTP TP+SAF LG E Sbjct: 360 RVMIGTYVLSAGFYDAYYNRARKVRALIKRDFDEAFAAGVDAILTPATPSSAFGLG-EMA 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + NDVFTV VN+AGLP ISVP L K +PLGLQLIG+P+ E L + ++E Sbjct: 419 DADPVAMYLNDVFTVTVNLAGLPGISVPVGLDAKGLPLGLQLIGRPWDEAGLLNHAHVLE 478 Query: 482 KEAGYF-RPHKWW 493 + AG+ +P KWW Sbjct: 479 RAAGFVEKPRKWW 491 >gi|329889395|ref|ZP_08267738.1| glutamyl-tRNAGln and/or aspartyl-tRNAAsn amidotransferase, A subunit [Brevundimonas diminuta ATCC 11568] gi|328844696|gb|EGF94260.1| glutamyl-tRNAGln and/or aspartyl-tRNAAsn amidotransferase, A subunit [Brevundimonas diminuta ATCC 11568] Length = 492 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 267/495 (53%), Positives = 362/495 (73%), Gaps = 5/495 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++++ D L++K S+ EL +++ IE SN +NAY+EV A KA A SD Sbjct: 1 MTDLTKLTLADAIDGLKAKTFSSEELTKAFLTNIEASNPTLNAYVEVTADKAMEQARASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+ LEG P+GIKD F T+G+ T A S++L GF P YESTVT LW +GAVMLG Sbjct: 61 ARLAKGEGGALEGAPLGIKDLFCTEGVQTTAGSNMLRGFVPPYESTVTANLWRDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS +GPV +PW+S S TPGGSSGGS++AVA LC A+ +DT Sbjct: 121 KLNMDEFAMGSSNETSAFGPVKNPWKSKGSNADLTPGGSSGGSASAVAADLCLAATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G+++FA SLDQAG I +TV+DSA+LL ++ +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRASRYGMVAFASSLDQAGPIAKTVKDSALLLNSMCSFDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++P PD+ +++ QS++G+ +G+PKEY LD + I K W+QG++WLK AG +IV Sbjct: 241 KDSTSLDIPTPDWTQSVGQSVKGLRIGVPKEYVLDGMPAEIQKLWEQGVAWLKAAGCEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEV 359 EISLPHT+YALP YYI++PAEASSNLARYDG+R+G R E L ++Y +R+ GFG+EV Sbjct: 301 EISLPHTKYALPTYYIVAPAEASSNLARYDGMRFGHRAEQFTSLDDLYATSRAEGFGKEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ IG YVLS+ YD++Y++A K+R I +DF + Q VD ILTP+TP++AF +G + Sbjct: 361 QRRLTIGAYVLSAGFYDAYYVKALKVRRRIAQDFDNVWGQ-VDAILTPSTPSAAFAIGDK 419 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + +M NDVFTV N+AGLP ISVPA L +PLGLQ+IG+ E T+F V Sbjct: 420 QIDPLTM--YLNDVFTVTTNLAGLPGISVPAGLSADGLPLGLQVIGKALDEATVFQVAGA 477 Query: 480 IEKEAGYF-RPHKWW 493 +E AG+ +P +WW Sbjct: 478 LEDAAGFVAKPDRWW 492 >gi|126461714|ref|YP_001042828.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodobacter sphaeroides ATCC 17029] gi|166217706|sp|A3PI90|GATA_RHOS1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|126103378|gb|ABN76056.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodobacter sphaeroides ATCC 17029] Length = 491 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/493 (57%), Positives = 366/493 (74%), Gaps = 9/493 (1%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N + ++E+RD L ++SAV+L + + AI+ + + +NA++ + A A +D R Sbjct: 4 NELTIAEARDALARGELSAVDLTMACLTAID-AGTPLNAFVHTTPEIALDQARAADARRG 62 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A L GIP+GIKD F T+G+ +QA S+IL GF+P YESTVT KL++ GAVMLGKLNM Sbjct: 63 A-GAGALNGIPLGIKDLFCTRGVASQAASNILRGFKPEYESTVTSKLFEAGAVMLGKLNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNETS YG ++PW+ D + TPGGSSGGS+AAVA LC A+ GTDTGGSI Sbjct: 122 DEFAMGSSNETSCYGDAVNPWKVDDR--RLTPGGSSGGSAAAVAADLCLAATGTDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTG VGIKPTYGR SR GI++FA SLDQAG +T++VRD+AILL A+AG+D D+T Sbjct: 180 RQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++PVPD+E AL I+G +GIP+EYR++ + I+ W +G L DAGA+IV+ISL Sbjct: 240 SADIPVPDFEAALTGDIRGRKIGIPREYRMEGMPAEIEALWARGREMLADAGAEIVDISL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKH 361 PHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I++MYE TR+ GFG+EV+ Sbjct: 300 PHTKYALPAYYVIAPAEASSNLARYDGVRYGHRARLGQGDGIVDMYEKTRAEGFGKEVQR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+MIGTYVLS+ YD++Y RARK+R LIKRDF EAF GVD ILTP TP+SAF LG E Sbjct: 360 RVMIGTYVLSAGFYDAYYNRARKVRALIKRDFDEAFAAGVDAILTPATPSSAFGLG-EMA 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + NDVFTV VN+AGLP ISVP L K +PLGLQLIG+P+ E L + ++E Sbjct: 419 DADPVAMYLNDVFTVTVNLAGLPGISVPVGLDAKGLPLGLQLIGRPWDEAGLLNHAHVLE 478 Query: 482 KEAGYF-RPHKWW 493 + AG+ +P KWW Sbjct: 479 RAAGFVEKPRKWW 491 >gi|254419787|ref|ZP_05033511.1| Amidase, putative [Brevundimonas sp. BAL3] gi|196185964|gb|EDX80940.1| Amidase, putative [Brevundimonas sp. BAL3] Length = 492 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 266/495 (53%), Positives = 363/495 (73%), Gaps = 5/495 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + + + D L++KD S+ E+ +++ +IE +N +NAY+EV A KA A SD Sbjct: 1 MSDLTKLTLKGAVDGLKAKDFSSAEITQAFLTSIEAANPTLNAYVEVTADKAMDMARASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI +G+ LEG P+GIKD F T+G+ T A S++L GF P YESTVT LW +GAVMLG Sbjct: 61 ARIASGEGGALEGAPLGIKDLFCTEGVQTTAGSNMLRGFVPPYESTVTANLWRDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETS +GPV +PW+S S TPGGSSGGS++AVA LC A+ +DT Sbjct: 121 KLNMDEFAMGSSNETSAFGPVKNPWKSTGSNADLTPGGSSGGSASAVAADLCLAATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G+++FA SLDQAG IT+TV D+A+LL+++ +D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRASRFGMVAFASSLDQAGPITKTVEDAALLLQSMCSFDV 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++P PD+ ++ +S++G+ +G+P+EY +D + I W QG++WLKDAG +IV Sbjct: 241 KDSTSLDVPTPDWTASVGKSVKGLRIGVPREYVVDGMPAEIQALWDQGVAWLKDAGCEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEV 359 EISLPHT+YALP YYI++PAEASSNLARYDG+R+G R + L ++Y +R+ GFG+EV Sbjct: 301 EISLPHTKYALPTYYIVAPAEASSNLARYDGMRFGHRADQFSSLDDLYATSRAEGFGKEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ IG YVLS+ YD++Y+RA K+R I DF + Q VD ILTP+TP++AF LG + Sbjct: 361 QRRLTIGAYVLSAGFYDAYYVRALKVRRRIAEDFDNVWGQ-VDAILTPSTPSAAFALGDK 419 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + +M NDVFTV N+AGLP ISVPA + +PLGLQ+IG+ E T+F VG Sbjct: 420 QIDPLTM--YLNDVFTVTTNLAGLPGISVPAGVDSGGLPLGLQVIGKALDEATVFQVGAA 477 Query: 480 IEKEAGYF-RPHKWW 493 +E+ AG+ +P +WW Sbjct: 478 LERAAGFTAKPGQWW 492 >gi|77462822|ref|YP_352326.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodobacter sphaeroides 2.4.1] gi|109891981|sp|Q3J459|GATA_RHOS4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|77387240|gb|ABA78425.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodobacter sphaeroides 2.4.1] Length = 491 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 283/493 (57%), Positives = 366/493 (74%), Gaps = 9/493 (1%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N + ++++RD L ++SAV+L + + AI+ + + +NA++ + A A +D R Sbjct: 4 NELTIADARDALAKGELSAVDLTMACLTAID-AGTPLNAFVHATPEIALDQARAADARRG 62 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A L GIP+GIKD F T+G+ +QA S+IL GF+P YESTVT KL++ GAVMLGKLNM Sbjct: 63 A-GAGALNGIPLGIKDLFCTRGVASQAASNILKGFKPEYESTVTSKLFEAGAVMLGKLNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNETS YG ++PW+ D + TPGGSSGGS+AAVA LC A+ GTDTGGSI Sbjct: 122 DEFAMGSSNETSCYGDAVNPWKVDDR--RLTPGGSSGGSAAAVAADLCLAATGTDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTG VGIKPTYGR SR GI++FA SLDQAG +T++VRD+AILL A+AG+D D+T Sbjct: 180 RQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++PVPD+E AL I+G +GIP+EYR++ + I+ W +G L DAGA+IV+ISL Sbjct: 240 SADIPVPDFEAALTGDIRGRKIGIPREYRMEGMPAEIEALWARGREMLADAGAEIVDISL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKH 361 PHT+YALPAYY+I+PAEASSNLARYDGVRYG R +G I++MYE TR+ GFG+EV+ Sbjct: 300 PHTKYALPAYYVIAPAEASSNLARYDGVRYGHRARLGQGDGIVDMYEKTRAEGFGKEVQR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+MIGTYVLS+ YD++Y RARK+R LIKRDF EAF GVD ILTP TP+SAF LG E Sbjct: 360 RVMIGTYVLSAGFYDAYYNRARKVRALIKRDFDEAFAAGVDAILTPATPSSAFGLG-EMA 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + NDVFTV VN+AGLP ISVP L K +PLGLQLIG+P+ E L + ++E Sbjct: 419 DADPVAMYLNDVFTVTVNLAGLPGISVPVGLDAKGLPLGLQLIGRPWDEAGLLNHAHVLE 478 Query: 482 KEAGYF-RPHKWW 493 + AG+ +P KWW Sbjct: 479 RAAGFVEKPRKWW 491 >gi|23014591|ref|ZP_00054400.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Magnetospirillum magnetotacticum MS-1] Length = 490 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/487 (57%), Positives = 357/487 (73%), Gaps = 5/487 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++E+RD L +AVEL ++I+A E + +NA+I A AA+ SD Sbjct: 1 MTKLTDLTMAEARDGLAKGAFTAVELTSAHIKATE-AQRHLNAFIVETPDLALDAAKASD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G A ++G+PIGIKD F T+G+ T A SHIL+GF+P YESTV+ KL GAV LG Sbjct: 60 ARRQAGTAGSMDGLPIGIKDLFCTEGVQTTAASHILEGFKPPYESTVSGKLKAAGAVSLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN+DEFAMGSSN+TSY+G V +PW+ + K PGGSSGGS+AAVA + A+ GTD Sbjct: 120 KLNLDEFAMGSSNQTSYFGAVENPWKKTSAPKAKLVPGGSSGGSAAAVAARMVMAATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G GIKPTYGRCSR GI++FA SLDQAG + RTVRD AI+L A+AG+D Sbjct: 180 TGGSIRQPAAFCGITGIKPTYGRCSRFGIVAFASSLDQAGPMARTVRDCAIMLGAMAGHD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T VN+ VPD+E+AL I+G+ VGIPKEYR D LS + K W+ GI W+K AGA Sbjct: 240 PKDSTSVNMAVPDFEKALTGDIRGLKVGIPKEYRPDGLSDEVAKVWELGIEWIKAAGATP 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VEISLPHT+YALP YYII+PAE SSNLARYDG+R+GLRV GK + EMY+NTR+ GFG EV Sbjct: 300 VEISLPHTKYALPTYYIIAPAECSSNLARYDGLRFGLRVPGKTLDEMYKNTRAAGFGAEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RI+IGTYVLS+ YD++Y +A+K+R LI DF +AFE VD+ILTPT P++AF G+ Sbjct: 360 RRRILIGTYVLSAGYYDAYYAKAQKVRRLIAEDFRKAFES-VDIILTPTAPSAAF--GQG 416 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + NDVFT+ +MAGLP +S+PA L + +PLGLQLIG+PF EET+F V + Sbjct: 417 EGTDDPVTMWLNDVFTIPTSMAGLPGLSLPAGLSKDGLPLGLQLIGRPFDEETVFRVAGV 476 Query: 480 IEKEAGY 486 +E A + Sbjct: 477 METAANF 483 >gi|114570256|ref|YP_756936.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Maricaulis maris MCS10] gi|122315855|sp|Q0ANY9|GATA_MARMM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|114340718|gb|ABI65998.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Maricaulis maris MCS10] Length = 491 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 269/494 (54%), Positives = 362/494 (73%), Gaps = 5/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + +S+ +L+++++SAVEL + E + ++NA+ A K A A+ SD Sbjct: 1 MSELFKLTLSDITAKLKAREVSAVELATEGLALCEAAQPKLNAFTAFDADKTLAMAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +++ G+ +EG P+ IKD FA +G+ T A S+IL GF+P YES+VT KLW+NG V L Sbjct: 61 EKLARGEGGLIEGAPLAIKDLFAVEGVETAASSNILKGFKPTYESSVTAKLWENGGVFLC 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K +MDEFAMGSSNETS GPV +PW+ + + TPGGSSGGS+AAVA LC + GTDT Sbjct: 121 KTSMDEFAMGSSNETSNTGPVNNPWKGANG-EMLTPGGSSGGSAAAVAADLCFGATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVG+K TYGR SR G ++FA SLD G +TV+DSA++L+A++G+D Sbjct: 180 GGSIRQPAAFTGTVGVKATYGRTSRWGAVAFASSLDHPGPFAKTVKDSALMLQAMSGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + VPD+ A+ QS++G+ +G+PKEYR+D + ID+ WQ+GI WLK AG +IV Sbjct: 240 KDSTSLPNDVPDFVAAVGQSVKGLRIGVPKEYRVDGMPAEIDEAWQKGIDWLKAAGCEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISLPHT+YALPAYYI++PAEASSNLARYDG+RYG RVEG ++ YENTR GFG EV+ Sbjct: 300 DISLPHTKYALPAYYIVAPAEASSNLARYDGMRYGNRVEGTNLNATYENTRGAGFGHEVQ 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD++YLRA+K+RT I +DF +AFE+ VD +LTP+ P++AF LG + Sbjct: 360 RRIMIGTYVLSAGYYDAYYLRAQKVRTRILQDFEQAFEK-VDAVLTPSAPSAAFALGSKS 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M NDVFTV N+AGLPA+SVPA + + +PLGLQ+I EET+F VG I Sbjct: 419 DDPIAM--YLNDVFTVTANLAGLPAMSVPAGVDKDGLPLGLQIITPALDEETMFKVGAAI 476 Query: 481 EKEAGYF-RPHKWW 493 E AG+ +P WW Sbjct: 477 EDSAGFVAKPENWW 490 >gi|87200845|ref|YP_498102.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Novosphingobium aromaticivorans DSM 12444] gi|109891964|sp|Q2G4F5|GATA_NOVAD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|87136526|gb|ABD27268.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Novosphingobium aromaticivorans DSM 12444] Length = 494 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 276/497 (55%), Positives = 358/497 (72%), Gaps = 7/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + ++ RD + D +A E+ ++ A+E + +NA+I ++A AA + D Sbjct: 1 MTNLTDLGIAAIRDGVARGDFTATEVATAFNAAVEAAQPALNAFIVTTPEEALEAAGKVD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G+PIG+KD FAT+G T A S IL+GF P YESTV+QKLWD GA ML Sbjct: 61 ADRTAGRPLGKMAGVPIGMKDLFATRGTQTTAASKILEGFMPEYESTVSQKLWDAGAGML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN+D+FAMGSSNETS +G VISPWR T PGGSSGGSS+AVA + A+ GTD Sbjct: 121 GKLNLDQFAMGSSNETSAFGNVISPWRRPGDTAPLAPGGSSGGSSSAVAARIAPAATGTD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + R V D AI+L+A+AG+D Sbjct: 181 TGGSIRQPAAFTGISGIKPTYGRCSRWGIVAFASSLDQAGPMARDVADCAIMLEAMAGFD 240 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +++PVP++ LD ++G VGIP+EYRLD + P + ++W+ GI+WLKDAGA+I Sbjct: 241 PKDSTSLDMPVPEWTANLDPDMRGKKVGIPREYRLDGMDPDVARSWEDGIAWLKDAGAEI 300 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 VEISLPHT+YALP YYII+PAEASSNLARYDGVRYGLR EG + +MY TR+ GFG Sbjct: 301 VEISLPHTKYALPTYYIIAPAEASSNLARYDGVRYGLRDLPEGAGLQDMYAATRAAGFGP 360 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IGTYVLS+ YD++Y +A+K+RTLI DFT AF + VDVIL PT P+SAF LG Sbjct: 361 EVKRRILIGTYVLSAGFYDAYYTQAQKVRTLISHDFTNAFRE-VDVILAPTAPSSAFALG 419 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVF+V ++AGLPA+SVPA L +PLGLQ+IG+ F E+ + + G Sbjct: 420 --EKSADPLEMYLNDVFSVPASLAGLPAMSVPAGLDRNGLPLGLQVIGRAFDEQGVLNAG 477 Query: 478 QIIEKEAGY-FRPHKWW 493 +E+ A + RP KWW Sbjct: 478 LALEQRARFSARPAKWW 494 >gi|56551679|ref|YP_162518.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Zymomonas mobilis subsp. mobilis ZM4] gi|241761200|ref|ZP_04759288.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752739|ref|YP_003225632.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|81598280|sp|Q5NPF3|GATA_ZYMMO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56543253|gb|AAV89407.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|241374107|gb|EER63604.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552102|gb|ACV75048.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 492 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 270/496 (54%), Positives = 363/496 (73%), Gaps = 7/496 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + V++ RD + D SA E+ +S++ A N ++NA+I + A AE++D Sbjct: 1 MTRLTDLGVTDLRDGIAKGDFSAKEVAESFLTAT-NEAEKLNAFITLTPDHALKQAEKAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K +G + L G+P+GIKD F T G T A S I+D F P YEST+T+KL+ GA M+G Sbjct: 60 KDRASGQLKPLSGVPLGIKDLFCTNGYRTTAASKIIDNFVPPYESTITEKLFSAGAGMVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+D+FAMGSSNETS +G VISPWR TPGGSSGGS+AAVA L A+ GTDT Sbjct: 120 KLNLDQFAMGSSNETSAFGNVISPWRQKGDDTALTPGGSSGGSAAAVAAKLVPAATGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTG G+KPTYGRCSR G+I+FA SLDQAG + +V+D A LL+ +AG+D Sbjct: 180 GGSIRQPASFTGITGLKPTYGRCSRYGVIAFASSLDQAGPMAHSVKDCAALLEVMAGFDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ VP++E+ L I+G +GIPKEYR+D ++P I+ WQ+GI +KDAGA+I+ Sbjct: 240 KDSTSVDVMVPNWEKLLSSDIRGKKIGIPKEYRVDGMAPEIESLWQRGIDMMKDAGAEII 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILEMYENTRSIGFGQE 358 ++SLPHTQ+AL AYYII+PAEASSNLARYDGVRYG R EG ++ +MY TR+ GFG E Sbjct: 300 DVSLPHTQHALAAYYIIAPAEASSNLARYDGVRYGERKTPEGGNLADMYAATRAAGFGDE 359 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD++Y++A+KIR LI RDF AF++ D++LTP TPT+AF LG+ Sbjct: 360 VKRRIMIGTYVLSAGFYDAYYIKAQKIRALIARDFEAAFDK-CDILLTPATPTAAFALGQ 418 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ + +M NDVFTV ++AGLPA++VP L E+ +PLGLQLIG+P E+++ + G Sbjct: 419 KQEDPIAM--YLNDVFTVPASLAGLPAMTVPVGLNEQGLPLGLQLIGKPLDEQSVLNAGL 476 Query: 479 IIEKEAGYF-RPHKWW 493 +E+ AG+ +P KWW Sbjct: 477 ALEERAGFTSQPKKWW 492 >gi|254294338|ref|YP_003060361.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Hirschia baltica ATCC 49814] gi|254042869|gb|ACT59664.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hirschia baltica ATCC 49814] Length = 492 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 261/494 (52%), Positives = 362/494 (73%), Gaps = 4/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++++ L++KD SA E+ +++ I+ +NS +NAY V KA A+ SD Sbjct: 1 MSDLTKLTLTDAVKGLKAKDFSAREITQAHLDVIDKANSAINAYTLVTTDKALEMADASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ LEG PIG+K+ F TKG+ T ACS IL F P YESTVTQ LWD GAVMLG Sbjct: 61 AKLAKGEGGILEGAPIGVKELFCTKGVRTTACSDILSNFVPTYESTVTQNLWDEGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMD+FAMGSSNETS +G V++PWR + TPGGSSGGS+AAVA +C A+ +DT Sbjct: 121 KLNMDQFAMGSSNETSCFGNVVNPWRRNGEETQLTPGGSSGGSAAAVAADMCLAATASDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGR SR G+++FA SLDQAG I + V D+A++L+A+ D+ Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRASRYGMVAFASSLDQAGPIAKNVEDTALMLEAMCSADD 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++ P + +L + ++GM +GIPKEYR++ +S I+ WQQGI WLK AGA+IV Sbjct: 241 KDSTSLHIETPKWTDSLSKGVKGMKIGIPKEYRVEGMSDEIEALWQQGIEWLKAAGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++SLPHT+YALPAYYI++PAEASSNLARYDG+R+G+R EG+++ ++Y TR+ GFG EV+ Sbjct: 301 DVSLPHTKYALPAYYIVAPAEASSNLARYDGMRFGIRKEGENLDDVYSTTRAEGFGDEVR 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+MIG YVLS+ YD++YL+A+K+R I DF EA+++ D +LTPT P++AF LG++ Sbjct: 361 RRLMIGAYVLSAGYYDAYYLKAQKVRKRILMDFQEAYKE-CDALLTPTCPSAAFGLGEKS 419 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M ND+FTV N+AGLPA+S+P +L + +PL LQ+IG+ EE+ F V ++I Sbjct: 420 ADPVEM--YLNDIFTVTANLAGLPAMSLPVSLNSQGLPLSLQVIGKALDEESCFRVAKVI 477 Query: 481 EKEAGYFRPHK-WW 493 E A + K WW Sbjct: 478 EDSAEFDSKAKAWW 491 >gi|332186863|ref|ZP_08388605.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Sphingomonas sp. S17] gi|332013196|gb|EGI55259.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Sphingomonas sp. S17] Length = 493 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 273/497 (54%), Positives = 361/497 (72%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + ++ RD +R A E+ +++ + + + +NA++ + A AAA+ +D Sbjct: 1 MTDLTTLGIAAIRDGVRDGQFKAREVAEAFNAKVAGARA-LNAFLVETPEHALAAADAAD 59 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G+ + L G+PIG+KD FATKG+ T A S IL+GF P YESTV+Q LW+ GA ML Sbjct: 60 AARAAGETLKPLAGVPIGMKDLFATKGVATTAASKILEGFVPPYESTVSQNLWNAGAGML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN+D+FAMGSSNETS +G V+SPWR + T PGGSSGGSS AV+ L + GTD Sbjct: 120 GKLNLDQFAMGSSNETSAFGNVVSPWRRPNDTAPLAPGGSSGGSSTAVSAGLAPGATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTG GIKPTYGRCSR G I+FA SLDQAG + R VRD AI+L+A+AG+D Sbjct: 180 TGGSIRQPAAFTGISGIKPTYGRCSRWGTIAFASSLDQAGPMARDVRDCAIMLEAMAGFD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT + L VP++E AL ++G VG+PKEYR+D + I+ WQQGI+W++DAGA+I Sbjct: 240 AKDATSLKLDVPNWEAALSADLKGRRVGVPKEYRVDGMPAEIEALWQQGIAWMRDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 VE+SLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR EG + +MY TR+ GFG Sbjct: 300 VEVSLPHTKYALPAYYIIAPAEASSNLARYDGVRYGLRELPEGAGLQDMYAATRAAGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IGTYVLS+ YD++Y +A+K+RTLI RDF AF + DV+LTPT P++AF LG Sbjct: 360 EVKRRILIGTYVLSAGFYDAYYTQAQKVRTLIARDFERAFGE-CDVLLTPTAPSAAFALG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++ + +M NDVFTV ++AGLPA+SVP L + +PLGLQ+IG+P E+ + + G Sbjct: 419 EKQADPLAM--YLNDVFTVPASLAGLPAMSVPGGLDKDGLPLGLQIIGKPLDEQGVLNAG 476 Query: 478 QIIEKEAGY-FRPHKWW 493 IE+ AG+ RP WW Sbjct: 477 LAIEQRAGFTARPQAWW 493 >gi|239948542|ref|ZP_04700295.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rickettsia endosymbiont of Ixodes scapularis] gi|241563463|ref|XP_002401714.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Ixodes scapularis] gi|215501906|gb|EEC11400.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Ixodes scapularis] gi|239922818|gb|EER22842.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rickettsia endosymbiont of Ixodes scapularis] Length = 493 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 257/484 (53%), Positives = 343/484 (70%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ ELV+++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSVKGLKNKDFTSKELVNAHIKQIEK-HKNLNAYVTETFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + R LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNKTRTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLIPGGSSGGSVAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNMKIGVPLSLGEGGIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSAGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS C D++YL+A+K+R L+ DF AF + VD IL P PT AF +G Sbjct: 360 EVKRRIMIGTYVLSSSCMDAYYLKAQKVRHLVANDFNNAFAK-VDAILLPAAPTEAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGMQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|85373102|ref|YP_457164.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Erythrobacter litoralis HTCC2594] gi|84786185|gb|ABC62367.1| glutamyl-tRNA(gln) amidotransferase subunit A [Erythrobacter litoralis HTCC2594] Length = 495 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/496 (55%), Positives = 352/496 (70%), Gaps = 8/496 (1%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + V++ RD + +A E+ +++ + + + A+I +KA AA D Sbjct: 3 SELTELGVADIRDGVADGSFTAREVAEAFNAQVAAAK-DLGAFIVETPEKALEAAAAVDA 61 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 NG+ + G+PIG+KD F T G+ T A SHIL+GF P YESTV+ LW GA MLG Sbjct: 62 ARANGETLGSMAGVPIGMKDLFCTDGVQTTAASHILEGFVPQYESTVSANLWRAGAGMLG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMD+FAMGSSNETSY+GPV SPWR S TPGGSSGGSS+AVA LC A+ GTDT Sbjct: 122 KLNMDQFAMGSSNETSYFGPVKSPWRKAGSNTALTPGGSSGGSSSAVAARLCPAATGTDT 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGT GIKPTYGRCSR G+++FA SLDQAG I R+VRD AI+L+A+AG+D Sbjct: 182 GGSIRQPAAITGTTGIKPTYGRCSRWGVVAFASSLDQAGPIARSVRDCAIMLEAMAGFDP 241 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DAT +++PVP +E L + G +GIP+EYR+D I +W++G WLKDAGA+IV Sbjct: 242 KDATSLDMPVPQWEAGLSADLSGKKIGIPREYRMDGTPQDILDSWERGKKWLKDAGAEIV 301 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQE 358 +ISLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR +G + +MY TR GFG E Sbjct: 302 DISLPHTKYALPAYYIIAPAEASSNLARYDGVRYGLRDLPDGAGLQDMYAATREEGFGDE 361 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI+IGTYVLS+ YD++Y +A+KIRTL+ RDF +A+ + D+IL PTTP +AF LG+ Sbjct: 362 VKRRILIGTYVLSAGFYDAYYNQAQKIRTLVARDFEQAWAE-CDLILAPTTPNAAFGLGE 420 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + +M NDVF V ++AGLPAISVP L +PLGLQL+G+PF E+ + + G Sbjct: 421 MQADPLAM--YLNDVFAVPASLAGLPAISVPGGLNSDGLPLGLQLVGKPFDEQGVLNAGL 478 Query: 479 IIEKEAGY-FRPHKWW 493 IE+ G+ RP WW Sbjct: 479 AIEQRNGFTARPETWW 494 >gi|148553522|ref|YP_001261104.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sphingomonas wittichii RW1] gi|166217714|sp|A5V3V0|GATA_SPHWW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148498712|gb|ABQ66966.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sphingomonas wittichii RW1] Length = 495 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 276/497 (55%), Positives = 360/497 (72%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + + ++ RD R+ D SA E+ D++ A+ + + +NA+I A AAAE +D Sbjct: 1 MTAITDLGLAGLRDGFRAGDFSAREIADAFNGAVAGAKA-LNAFIIETPDHATAAAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+ L G+P+GIKD F T G T A SH+L GF P YESTVT KL+ GA MLG Sbjct: 60 RARAAGELLPLSGVPLGIKDLFCTAGHQTTAASHMLGGFTPTYESTVTGKLFAAGAGMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN+D+FAMGSSNETS YG V+SPWR D + PGGSSGGSS+A+A + A+ GTD Sbjct: 120 KLNLDQFAMGSSNETSAYGNVVSPWRRNDGGNAPLAPGGSSGGSSSAIAARIVPAATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + + VRDSAILL+A++G+D Sbjct: 180 TGGSIRQPAAFTGIAGIKPTYGRCSRFGIVAFASSLDQAGAMAQDVRDSAILLEAMSGFD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +++ VP +E L ++G VGIPKEYR+D + ID W+QGI WL+DAGA+I Sbjct: 240 PKDSTSLDVAVPKWEANLSSDLKGKKVGIPKEYRVDNMPAEIDALWRQGIEWLRDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 V++SLPHT+YALP YYII+PAEASSNLARYDGVRYGLR EG ++ EMY TR+ GFG Sbjct: 300 VDVSLPHTRYALPTYYIIAPAEASSNLARYDGVRYGLRDLPEGANLQEMYAATRAAGFGP 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IGTYVLS+ YD++Y +A+K+R LI RDF EAF Q VDV+LTPT P++AF LG Sbjct: 360 EVKRRILIGTYVLSAGYYDAYYTKAQKVRALIARDFEEAFRQ-VDVLLTPTAPSAAFALG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ + NDVFTV ++AG+PA+SVPA L + +PLGLQ+IG+P E+ + + G Sbjct: 419 --EKSADPLEMYLNDVFTVPASLAGVPAMSVPAGLDGQGLPLGLQIIGRPLDEQGVLNAG 476 Query: 478 QIIEKEAGY-FRPHKWW 493 IE+ AG+ +P WW Sbjct: 477 LAIEQRAGFTAKPQNWW 493 >gi|330814158|ref|YP_004358397.1| aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter sp. IMCC9063] gi|327487253|gb|AEA81658.1| aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter sp. IMCC9063] Length = 487 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 267/494 (54%), Positives = 360/494 (72%), Gaps = 9/494 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ + + E +++SK++SA+E ++Y+ I+ S ++N ++ +A A+A+ D Sbjct: 1 MSEITKLTLVELTKKIKSKELSALETANAYVSRIKKSK-KLNTFVTETLDQAIASAKNID 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + L G PI +KD F TK + T A S IL F P YESTVT KLWD+GA++LG Sbjct: 60 DK--NLKSGVLAGAPIAVKDLFCTKNVQTTASSKILKNFIPPYESTVTSKLWDSGAILLG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSSNETS YG VI+P++ + + PGGSSGG S+AV+ L ++++GTDT Sbjct: 118 KLNCDEFAMGSSNETSAYGNVINPYQK--NGEHLVPGGSSGGCSSAVSANLTSSTVGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTG VG+KPTYGRCSR GI++FA SLDQAG +T+ V DSA++L I+GYDE Sbjct: 176 GGSIRQPASFTGIVGLKPTYGRCSRWGIVAFASSLDQAGPMTKDVSDSALMLDVISGYDE 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T N+ D+ +L+++I+G+ VGIPKEY +D + I W +GI W+K++GA I Sbjct: 236 KDSTSANIEKGDFLSSLNKNIKGLKVGIPKEYIVDNMPKEIQTLWDKGIEWMKESGAIIK 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ISLP+T+YALP YYI++PAEASSNLARYDGV+YG R GKD++EMYENTR+ GFG EVK Sbjct: 296 NISLPNTKYALPTYYIVAPAEASSNLARYDGVKYGFRAPGKDLIEMYENTRAEGFGNEVK 355 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLSS YD++YL+A+++R LIK DF AF++ VD ILTPT P+SAF +G + Sbjct: 356 RRIMIGTYVLSSGYYDAYYLKAQQVRRLIKNDFDLAFKE-VDTILTPTAPSSAFKIGDKT 414 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+ SM NDVFTV VN+AGLPAIS+PA E +PLGLQLIG+ F E+T+ + + Sbjct: 415 NDPISM--YLNDVFTVPVNLAGLPAISIPAGFDEFGLPLGLQLIGKSFDEQTILNSAYAL 472 Query: 481 EKEAGY-FRPHKWW 493 E++ + + WW Sbjct: 473 EEKISFKSKVIDWW 486 >gi|307292656|ref|ZP_07572502.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sphingobium chlorophenolicum L-1] gi|306880722|gb|EFN11938.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sphingobium chlorophenolicum L-1] Length = 499 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 275/503 (54%), Positives = 366/503 (72%), Gaps = 14/503 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + V+E RD R+ D SA E+ +++ + + + + +NA+I +KA AA+ +D Sbjct: 1 MTELTDLTVAEIRDGFRAGDFSAREVAEAFNKNVAAARA-LNAFIVETPEKALEAADAAD 59 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+ + L G+PIG+KD F T+G+ T A SH+L+GF P YESTV+ KLW GA ML Sbjct: 60 RAKAAGEPLKPLSGVPIGMKDLFCTEGVQTTAASHMLEGFTPTYESTVSGKLWAAGAGML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSM------DSTDKFTPGGSSGGSSAAVAGFLCA 173 GKLN+D+FAMGSSNETSY+G VISPWR PGGSSGGSS+A+A LC Sbjct: 120 GKLNLDQFAMGSSNETSYFGNVISPWRRARKDGGGGDNAALAPGGSSGGSSSAIAARLCP 179 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A+ GTDTGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + RTVRD+AILL+ Sbjct: 180 AATGTDTGGSIRQPAAFTGISGIKPTYGRCSRWGIVAFASSLDQAGPMARTVRDNAILLE 239 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +AG+D D+T ++L VP +E L ++G VGIPKEYR D L+ I W +GI WLK Sbjct: 240 TMAGFDPKDSTSLDLAVPQWEAHLSSDLKGKKVGIPKEYRPDGLNAEIAALWDRGIEWLK 299 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTR 351 DAGA++V++SLPHT+YALP YYII+PAEASSNLARYDGVRYG R +G + +MY TR Sbjct: 300 DAGAEVVDVSLPHTKYALPTYYIIAPAEASSNLARYDGVRYGQRDLPDGAGLQDMYAATR 359 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++GFG EVK RIMIGTYVLS+ YD++Y +A+K+R LI RDF +AFE+ D++LTPT P+ Sbjct: 360 ALGFGPEVKRRIMIGTYVLSAGFYDAYYTQAQKVRALIARDFEQAFEK-CDLLLTPTAPS 418 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 ++F LG+++ + +M NDVFTV ++AGLPA++VP L + +PLGLQ+IG+ E+ Sbjct: 419 ASFALGEKQADPLAM--YLNDVFTVPASLAGLPAMAVPGGLDAQGLPLGLQIIGKALDEQ 476 Query: 472 TLFSVGQIIEKEAGY-FRPHKWW 493 T+ + G IE+ AG+ RP KWW Sbjct: 477 TVLNAGLAIEERAGFTARPDKWW 499 >gi|294012195|ref|YP_003545655.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Sphingobium japonicum UT26S] gi|292675525|dbj|BAI97043.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Sphingobium japonicum UT26S] Length = 494 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 270/510 (52%), Positives = 362/510 (70%), Gaps = 33/510 (6%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + V+E RD R+ D SA E+ +++ + + + +NA+I ++A AA+ +D Sbjct: 1 MTELTDLTVAEIRDGFRAGDFSAREVAEAFNANVAAAKA-LNAFIVETPERALEAADAAD 59 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A + L G+PIG+KD F T+G+ T A SH+L+GF P YESTV++KLWD GA ML Sbjct: 60 RAKAAGEALKPLSGVPIGMKDLFCTEGVQTTAASHMLEGFTPTYESTVSKKLWDAGAGML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF--------- 170 GKLN+D+FAMGSSNETSY+G VISPWR SGG +AA+A Sbjct: 120 GKLNLDQFAMGSSNETSYFGNVISPWRR------------SGGDNAALAPGGSSGGSSAA 167 Query: 171 ----LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 LC A+ GTDTGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + RTVR Sbjct: 168 ISARLCPAATGTDTGGSIRQPAAFTGISGIKPTYGRCSRWGIVAFASSLDQAGPMARTVR 227 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 D+AILL+ +AG+D D+T ++L VP +E L ++G VGIP+EYR D L+ I W Sbjct: 228 DNAILLETMAGFDPKDSTSLDLAVPQWEANLSSDLKGKKVGIPREYRPDGLNAEISAMWD 287 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDIL 344 +GI WLKDAGA++V++SLPHT+YALP YYII+PAEASSNLARYDGVRYG R +G + Sbjct: 288 RGIEWLKDAGAEVVDVSLPHTKYALPTYYIIAPAEASSNLARYDGVRYGQRDLPDGAGLQ 347 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 +MY TR+ GFG EVK RIMIGTYVLS+ YD++Y +A+K+R LI RDF +AFE+ D++ Sbjct: 348 DMYAATRAAGFGPEVKRRIMIGTYVLSAGFYDAYYTQAQKVRALIARDFEQAFEK-CDLL 406 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 LTPT P+++F LG+++ + +M NDVFTV ++AGLPA++VP L + +PLGLQ+I Sbjct: 407 LTPTAPSASFALGEKQADPLAM--YLNDVFTVPASLAGLPAMAVPGGLDSQGLPLGLQII 464 Query: 465 GQPFREETLFSVGQIIEKEAGY-FRPHKWW 493 G+ E+T+ + G IE+ AG+ RP KWW Sbjct: 465 GRALDEQTVLNAGLAIEERAGFAARPDKWW 494 >gi|83945531|ref|ZP_00957878.1| glutamyl-tRNA amidotransferase subunit A [Oceanicaulis alexandrii HTCC2633] gi|83851107|gb|EAP88965.1| glutamyl-tRNA amidotransferase subunit A [Oceanicaulis alexandrii HTCC2633] Length = 493 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 261/494 (52%), Positives = 355/494 (71%), Gaps = 3/494 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E +++ + + L KD SAVE+ ++ ++A E + +N + + KA+ A+ SD Sbjct: 1 MTEFTQLSLFDVLEGLEKKDFSAVEVAEATVKAAEAAQGALNCFTFIDGDKAKEMAQVSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+A L+G PI IKD F + T A S+IL GF+P YESTVTQKLWD GAV G Sbjct: 61 ARRAKGEAGALDGAPIAIKDLFGVYDVETTASSNILKGFKPRYESTVTQKLWDAGAVFFG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K +MDEFAMGSSNET+ GPV++PWR+ S +K PGGSSGGS+AA+A + + GTDT Sbjct: 121 KTSMDEFAMGSSNETAATGPVVNPWRAKGSDEKLVPGGSSGGSAAALAAGISYGATGTDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG VG KPTYGRCSR G+++FA SLD G +TV+D+A+L + ++G+D Sbjct: 181 GGSIRQPAAFTGLVGAKPTYGRCSRWGVVAFASSLDHPGPFGKTVKDTALLTQVMSGHDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPD A+ + ++G+ +GIPKEYR+D + ID W++G WLK+ GA+IV Sbjct: 241 KDSTSYPGAVPDMVSAVSRGVKGLKIGIPKEYRVDGMPSAIDALWEKGAQWLKEQGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLP T+YALPAYYII+PAEASSNLARYDG+R+G RVEG+D+++ YE TR+ GFG EV+ Sbjct: 301 EISLPMTKYALPAYYIIAPAEASSNLARYDGMRFGQRVEGEDLIDTYEKTRAQGFGNEVQ 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTYVLS+ YD++YL+A K+R I DF AFE GVD ILTPTTP++AF +G + Sbjct: 361 RRILIGTYVLSAGYYDAYYLKALKVRRKILEDFNAAFE-GVDAILTPTTPSAAFGIGSKA 419 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + ND+FTV N+AG+PA+SVPA L + +PLGLQ+I + EET+F+VG + Sbjct: 420 -DADPIEMYLNDIFTVTANIAGIPAMSVPAGLDKNGLPLGLQVITKALDEETMFAVGGAL 478 Query: 481 EKEAGYF-RPHKWW 493 E AG+ +P +WW Sbjct: 479 EHAAGFTAKPEQWW 492 >gi|58040806|ref|YP_192770.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gluconobacter oxydans 621H] gi|81556901|sp|Q5FND3|GATA_GLUOX RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|58003220|gb|AAW62114.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconobacter oxydans 621H] Length = 495 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 273/490 (55%), Positives = 358/490 (73%), Gaps = 4/490 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS ++ ++ +RD L+++ ISAVEL +++I AIE + Q+N++I +AR AA+ SD Sbjct: 1 MSGIHDFTLASARDALKARKISAVELTNAHIDAIERLDGQLNSFITRTPDQAREAAKASD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + G+ L GIP+GIKD F T G+ T A S IL F P YESTVT L +GAV LG Sbjct: 61 EALAKGEGGSLCGIPLGIKDLFCTNGVRTTAASKILGNFVPPYESTVTANLLKDGAVFLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGS+N TS +GPV +PW+ DS K PGGSSGGS+AAVA L + GTDT Sbjct: 121 KLNLDEFAMGSANLTSAFGPVENPWKRKDSDAKLVPGGSSGGSAAAVAAGLVLGATGTDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTG GIKPTYGRCSR G I+FA SLDQAG + R ++D AILL+++AG+D Sbjct: 181 GGSIRQPAAFTGIAGIKPTYGRCSRFGTIAFASSLDQAGPMARNLQDCAILLESMAGFDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+ PVP YE AL + ++G+ VGIPKEY ++ + I+ WQQG++WL+D GA+IV Sbjct: 241 RDSTSVDTPVPHYEAALKRGVKGLRVGIPKEYHVEGMPAEIEALWQQGMTWLRDVGAEIV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLPHT+Y LP YYI + AEASSNLARYDGVR+G RV + +YE +R+ GFG EVK Sbjct: 301 EVSLPHTKYGLPTYYIAALAEASSNLARYDGVRFGERVSASTLDGLYEASRAAGFGDEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGT+VLSS YD++YLRA+K+RTLI++DF +AFE VDV+LTPT P+ AF ++E Sbjct: 361 RRILIGTHVLSSGYYDAYYLRAQKVRTLIQQDFLKAFEN-VDVLLTPTAPSGAF--AQDE 417 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + NDVFTV +MAG+PA+SVPA L + +PLGLQLIG+ F EETL + G I Sbjct: 418 KPTDPVQMYLNDVFTVPASMAGVPALSVPAGLDARGVPLGLQLIGKFFDEETLIAAGHAI 477 Query: 481 EKEAGY-FRP 489 E+ A + RP Sbjct: 478 EQAAAFHHRP 487 >gi|262277135|ref|ZP_06054928.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [alpha proteobacterium HIMB114] gi|262224238|gb|EEY74697.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [alpha proteobacterium HIMB114] Length = 486 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 271/496 (54%), Positives = 361/496 (72%), Gaps = 14/496 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + + + ++++SK+IS E SY+ + S ++N +IE +A A+ Sbjct: 1 MTEIYQLTLYDLIEKIKSKEISCEEATKSYVDRAKKSQ-KLNCFIEETFDQALDKAKNQS 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I ++ L G P +KD F TKGI T A S +L+GF+P YESTVT KLWD GA +LG Sbjct: 60 GKI--DTSKKLFGAPFAVKDLFCTKGIQTTASSKMLEGFKPEYESTVTSKLWDEGANLLG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN DE+AMGSSNETSY+G VI+P+R+ DK PGGSSGGS++AVA L +A++GTD Sbjct: 118 KLNCDEYAMGSSNETSYFGNVINPYRN----DKDLVPGGSSGGSASAVAAHLTSATVGTD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASFTGTVG+KPTYGRCSR GI++FA SLDQAG +T+ VRD+++L++ I+G+D Sbjct: 174 TGGSIRQPASFTGTVGLKPTYGRCSRWGIVAFASSLDQAGPMTKDVRDASLLMEVISGHD 233 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + + + L + I+G+ +GIPKEY++D +S I W +GI +K +G +I Sbjct: 234 NKDSTSAQIKQEVFSQKLTKDIKGLKIGIPKEYKIDGMSKEIIDLWDKGIEIVKSSGCEI 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EISLPHT+YALPAYYII+PAEASSNLARYDGVRYG R EGKD++EMYENTRS+GFG EV Sbjct: 294 KEISLPHTKYALPAYYIIAPAEASSNLARYDGVRYGFRAEGKDLIEMYENTRSLGFGDEV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI+IGTYVLSS YD++YL+A+K+R LIK DF +AF + VD ILTPTTP++AF +G Sbjct: 354 KRRILIGTYVLSSGYYDAYYLKAQKVRRLIKNDFDQAF-KSVDTILTPTTPSAAFAIG-- 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 EN + NDV TV VN+AGLPAIS+PA + +PLGLQLIG+ F E+T+ + Sbjct: 411 ENVDDPISMYLNDVLTVPVNLAGLPAISIPAGYDQNNLPLGLQLIGKSFDEQTVLNNAYA 470 Query: 480 IEKEAGYFRPH--KWW 493 IE+ F+P+ WW Sbjct: 471 IEQSIN-FKPNFKDWW 485 >gi|94497360|ref|ZP_01303931.1| glutamyl-tRNA(gln) amidotransferase subunit A [Sphingomonas sp. SKA58] gi|94423223|gb|EAT08253.1| glutamyl-tRNA(gln) amidotransferase subunit A [Sphingomonas sp. SKA58] Length = 499 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 275/503 (54%), Positives = 363/503 (72%), Gaps = 14/503 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + V+E R+ R D SA E+ +++ + + + +NA+I +KA AA+ +D Sbjct: 1 MTDLTDLTVAEIRNGFRGGDFSAREVAEAFNANVTAAKA-LNAFIVETPEKALEAADAAD 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K GD+ L G+PIG+KD F T+G+ T A SH+L+GF P YESTV+ KLW GA ML Sbjct: 60 KAKAAGDSLGALAGVPIGMKDLFCTQGVQTTAASHMLEGFVPTYESTVSGKLWAAGAGML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCA 173 GKLN+D+FAMGSSNETSYYG VISPWR + PGGSSGGSS+A+A LC Sbjct: 120 GKLNLDQFAMGSSNETSYYGNVISPWRRAKTDGGRGDNAALAPGGSSGGSSSAIAARLCP 179 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A+ GTDTGGSIRQPA+FTG GIKPTYGRCSR GI++FA SLDQAG + RTVRD+AILL+ Sbjct: 180 AATGTDTGGSIRQPAAFTGISGIKPTYGRCSRWGIVAFASSLDQAGPMARTVRDNAILLE 239 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 ++G+D D+T ++LPVP +E L ++G TVGIPKEYR D L+ I W +GI WLK Sbjct: 240 VMSGFDPKDSTSLDLPVPQWEANLSSDLKGKTVGIPKEYRPDGLNAEISAMWDRGIEWLK 299 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTR 351 DAGA++VE+SLPHT+YALP YYII+PAEASSNLARYDGVRYG R +G + +MY TR Sbjct: 300 DAGAQVVEVSLPHTKYALPTYYIIAPAEASSNLARYDGVRYGQRDLPDGAGLQDMYAATR 359 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RIMIGTYVLS+ YD++Y +A+K+R LI RDF AFE+ D++LTPT P+ Sbjct: 360 AAGFGPEVKRRIMIGTYVLSAGFYDAYYTQAQKVRALIARDFELAFEK-CDLLLTPTAPS 418 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 ++F LG+++ + +M NDVFTV ++AGLPA+++P L +P+GLQ+IG+ E+ Sbjct: 419 ASFALGEKQADPLAM--YLNDVFTVPASLAGLPAMAIPGGLDSAGLPIGLQVIGKALDEQ 476 Query: 472 TLFSVGQIIEKEAGYF-RPHKWW 493 T+ + IE+ AG+ RP KWW Sbjct: 477 TVLNASLAIEERAGFTARPDKWW 499 >gi|85707673|ref|ZP_01038739.1| glutamyl-tRNA amidotransferase subunit A [Erythrobacter sp. NAP1] gi|85689207|gb|EAQ29210.1| glutamyl-tRNA amidotransferase subunit A [Erythrobacter sp. NAP1] Length = 493 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 275/497 (55%), Positives = 362/497 (72%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + V RD + D +A E+ +S+ A+ S +++NA+I A AAA+ D Sbjct: 1 MTDLTNLGVKAIRDGVAGGDFTAREVAESFNAAVA-SAAELNAFIVTTPDHALAAADAVD 59 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G D + G+PIG+KD FA+ G+ T A SHIL+GF+P YESTV+Q LW+ GA ML Sbjct: 60 AKRAKGEDLGAMGGVPIGMKDLFASHGVQTTAASHILEGFKPEYESTVSQNLWNAGAGML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN+D+FAMGSSNETSY+G V SPWR S +PGGSSGGSS+AVA + A+ GTD Sbjct: 120 GKLNLDQFAMGSSNETSYFGNVASPWRKEGSNAAMSPGGSSGGSSSAVAARIAPAATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTG GIKPTYGRCSR G+++FA SLDQAG + R+V D AI+L A+AG+D Sbjct: 180 TGGSIRQPAAFTGICGIKPTYGRCSRWGVVAFASSLDQAGPMARSVEDCAIMLGAMAGFD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT + + VPD+E AL+ ++G VGIPKEYR+D I +W+QG +WLKDAGA+I Sbjct: 240 PKDATSLKMDVPDWEAALNADLKGKKVGIPKEYRMDGTDEAILASWEQGKAWLKDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 V++SLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR EG + +MY TR+ GFG Sbjct: 300 VDVSLPHTKYALPAYYIIAPAEASSNLARYDGVRYGLRDLPEGAGLQDMYAATRAEGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IGTYVLS+ YD++Y +A+K+R L+ RDF +A+ + D+IL PTTPT++FPLG Sbjct: 360 EVKRRILIGTYVLSAGFYDAYYNQAQKVRALVARDFEQAWGE-CDLILAPTTPTASFPLG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + +M NDVF V ++AGLPA+SVPA L +PLGLQL+G+PF E+T+ G Sbjct: 419 SLNEDPLTM--YLNDVFAVPASLAGLPAMSVPAGLNPDGLPLGLQLVGKPFDEQTVLDAG 476 Query: 478 QIIEKEAGYFR-PHKWW 493 I++ +G+ + P KWW Sbjct: 477 LAIQQRSGFEQAPEKWW 493 >gi|149187019|ref|ZP_01865326.1| glutamyl-tRNA(gln) amidotransferase subunit A [Erythrobacter sp. SD-21] gi|148829308|gb|EDL47752.1| glutamyl-tRNA(gln) amidotransferase subunit A [Erythrobacter sp. SD-21] Length = 493 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 269/497 (54%), Positives = 360/497 (72%), Gaps = 8/497 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + V + RD + S D +A E+ +S+ A+ S +++NA+I A AA+ D Sbjct: 1 MTAYTQLGVKDIRDGVASGDFTAREVAESFNAAVA-SAAELNAFIVTTPDHALTAADAVD 59 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR D + G+PIG+KD FATKG+ T A SHIL+GF+P YESTV+QKLWD GA ML Sbjct: 60 AKRARGEDLGKMGGVPIGMKDLFATKGVQTTAASHILEGFKPEYESTVSQKLWDAGAGML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN+D+FAMGSSNETSY+G V SPW+ + +PGGSSGGSS+AVA + A+ GTD Sbjct: 120 GKLNLDQFAMGSSNETSYFGNVSSPWKKDGTNAAMSPGGSSGGSSSAVAARIAPAATGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+FTG GIKPTYGRCSR G+++FA SLDQAG + R+V D AI+L+A+AG+D Sbjct: 180 TGGSIRQPAAFTGICGIKPTYGRCSRWGVVAFASSLDQAGPMARSVEDCAIMLEAMAGFD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT + + VP++E L ++G +GIP+EYR+D I +W+QG + L+DAGA+I Sbjct: 240 PKDATSLQMDVPNWEATLSADLKGKKIGIPREYRMDGTDQAILDSWEQGKAMLRDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 V++SLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR +G + +MY R+ GFG Sbjct: 300 VDVSLPHTKYALPAYYIIAPAEASSNLARYDGVRYGLRDLPDGAGLQDMYAAIRAAGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK R++IGTYVLS+ YD++Y +A+KIRTL+ +DF +AF + DVIL PTTPT++FPLG Sbjct: 360 EVKRRVLIGTYVLSAGFYDAYYTQAQKIRTLVAQDFEKAFAE-CDVILAPTTPTASFPLG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + +M NDVF V ++AGLPA+SVPA + +PLGLQL+G+PF E+ + + G Sbjct: 419 SLNEDPLTM--YLNDVFAVPASLAGLPAMSVPATVNPDGLPLGLQLVGRPFDEQGVLNAG 476 Query: 478 QIIEKEAGY-FRPHKWW 493 I++ G+ +P KWW Sbjct: 477 LAIQQRVGFEAQPEKWW 493 >gi|296115809|ref|ZP_06834435.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gluconacetobacter hansenii ATCC 23769] gi|295977786|gb|EFG84538.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gluconacetobacter hansenii ATCC 23769] Length = 493 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 262/488 (53%), Positives = 356/488 (72%), Gaps = 5/488 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++ + D LR ++ SA ELV +++ AI N ++NA+I V +++A AA+ +D + Sbjct: 2 LTELTIAAAHDGLRRREFSASELVGAHVDAIGRLNGRLNAFITVTSEQALVAAKRADDLL 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + DA L GIP+GIKD F T G+ T A S +L+ F P YESTVT L +GAV +GK N Sbjct: 62 ASKDAPTLTGIPLGIKDLFCTNGVRTTAASRMLEEFVPPYESTVTANLLRDGAVFVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +DEFAMGS+N TS +G V +PW R D+ PGGSSGGS+AAVA L + GTDTGG Sbjct: 122 LDEFAMGSANITSAFGAVENPWKREGDAQTALVPGGSSGGSAAAVAAGLAMGATGTDTGG 181 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA++ G VG+KPTYGRCSR G I+FA SLDQAG + RTV D AI+L+++AG+D D Sbjct: 182 SIRQPAAYCGIVGLKPTYGRCSRWGTIAFASSLDQAGPMARTVEDCAIMLQSMAGFDPKD 241 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V+ P+ DY A S++GM VGIP+EYR++ + I+ +W+QGI WL+DAG +IV++ Sbjct: 242 STSVDHPLDDYRAACSTSLKGMRVGIPREYRVEGMPAGIEASWRQGIEWLRDAGCEIVDV 301 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SLPHT+Y L YYI++PAE SSNLARYDGVR+G RV + EMYE TR GFG EV+ R Sbjct: 302 SLPHTKYGLATYYIVAPAECSSNLARYDGVRFGRRVAAPTLDEMYEKTRREGFGAEVRRR 361 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTYVLS+ YD++YL+A+K+R+LI+RDFTEAFE+ VDV+LTPT P+ AF G++ ++ Sbjct: 362 IMVGTYVLSAGYYDAYYLKAQKVRSLIRRDFTEAFEK-VDVLLTPTAPSPAFAQGEKTDD 420 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M NDVFTV +MAG+PA+S+P L E+K+PLGLQLIG+PF E+++ + G +E+ Sbjct: 421 PVQM--YLNDVFTVPASMAGMPAMSLPVGLSERKLPLGLQLIGRPFDEKSVLAAGHALER 478 Query: 483 EAGY-FRP 489 A + RP Sbjct: 479 AAAFTHRP 486 >gi|83594506|ref|YP_428258.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodospirillum rubrum ATCC 11170] gi|109891980|sp|Q2RPH4|GATA_RHORT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|83577420|gb|ABC23971.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodospirillum rubrum ATCC 11170] Length = 500 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 262/485 (54%), Positives = 350/485 (72%), Gaps = 4/485 (0%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L + ++E+RD + + +EL ++++ +E + +NA+I AR AE S + Sbjct: 5 TTLTDLTIAEARDAMAKGAFTPLELTNAHLARME-AGRGLNAFITETPDLARMQAERSGE 63 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R+ G A +EGIPIGIKD F T+G+ T A S ILDGF P YESTV+ L GAVMLGK Sbjct: 64 RLRAGKAGPMEGIPIGIKDLFCTEGVRTTAGSKILDGFVPPYESTVSANLAKAGAVMLGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSSN+TS GPVI+PW D ++ PGGSSGGS+AAVAG L A+ GTDTG Sbjct: 124 TNLDEFAMGSSNKTSASGPVINPWTRTDDDEQLVPGGSSGGSAAAVAGRLAMAATGTDTG 183 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYGRCSR G+++FA SLDQAG +TRTVRD+AI+LKA+AG+D Sbjct: 184 GSIRQPAAFCGLVGLKPTYGRCSRWGVVAFASSLDQAGPMTRTVRDAAIMLKAMAGHDPM 243 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + VP++E L I+G+ VG+P++YR + L P I W +G LKDAGA +VE Sbjct: 244 DGTSAPVEVPNFEAVLSGDIRGLRVGLPRQYRPEGLDPEIAALWDRGAEMLKDAGATLVE 303 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LPHT+YAL YYI++PAEASSNLARYDGVRYGLRV G+ + EMY TR+ GFG+EV+ Sbjct: 304 VDLPHTKYALATYYIVAPAEASSNLARYDGVRYGLRVPGETLDEMYCKTRAAGFGEEVRR 363 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R++IGTY LS+ YD++YL+A+K+R LI +DF AFE VDV+LTPTTP++AF L + + Sbjct: 364 RVLIGTYALSAGYYDAYYLKAQKVRALIAQDFKTAFET-VDVLLTPTTPSAAFGLNETID 422 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M NDVFTV ++AGLP +SVP L + +PLGLQL+G+ F EET+ + G +E Sbjct: 423 DPITM--YLNDVFTVPTSLAGLPGLSVPVGLSSRGLPLGLQLVGRYFDEETVLNAGLALE 480 Query: 482 KEAGY 486 + + + Sbjct: 481 RASAF 485 >gi|296284578|ref|ZP_06862576.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Citromicrobium bathyomarinum JL354] Length = 494 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/498 (54%), Positives = 353/498 (70%), Gaps = 9/498 (1%) Query: 1 MSE-LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 MSE L + V RD + D +A E+ +++ A + +NA+I +KA AA+ Sbjct: 1 MSEDLTNLGVKAIRDGVAGGDFTAREVAEAF-NANVAAAKDLNAFIVATPEKALEAADAI 59 Query: 60 D-KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D KR D + G+PIG+KD F T G+ T A SHIL+GF P YESTV+ LW GA M Sbjct: 60 DAKRAKGEDLGKMGGVPIGMKDLFCTYGVQTTAASHILEGFVPQYESTVSANLWKAGAGM 119 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLN+D+FAMGSSNETSY+G V+SPW+ S PGGSSGGSS AVA L A+ GT Sbjct: 120 LGKLNLDQFAMGSSNETSYFGNVLSPWKKAGSNAALIPGGSSGGSSTAVAARLAPAATGT 179 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ TG GIKPTYGRCSR G+++FA SLDQAG + R V D AI+L+A+AG+ Sbjct: 180 DTGGSIRQPAAVTGITGIKPTYGRCSRWGVVAFASSLDQAGPMARDVTDCAIMLEAMAGF 239 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+T +++PVP++E+ L+ + G VGIP EYR++ I +W++G WL+DAGA+ Sbjct: 240 DPKDSTSLDMPVPEWEKGLNPDLTGKKVGIPSEYRMEGTDQAILDSWERGKEWLRDAGAE 299 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFG 356 IV+ISLPHT+YALPAYYII+PAEASSNLARYDGVRYGLR EG + +MY TR+ GFG Sbjct: 300 IVDISLPHTKYALPAYYIIAPAEASSNLARYDGVRYGLRDLPEGAGLQDMYAATRAAGFG 359 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI+IGTYVLS+ YD++Y +A+KIRTL+ +DF +A+ + D+IL PTTP +AFPL Sbjct: 360 DEVKRRILIGTYVLSAGFYDAYYTQAQKIRTLVAQDFEKAWGE-CDLILAPTTPNAAFPL 418 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G + + +M NDVF V ++AGLPA+SVPA L +PLGLQ+IG+ F E+ + + Sbjct: 419 GGFDGDPLAM--YLNDVFAVPASLAGLPAMSVPAMLNGDGLPLGLQIIGKAFDEQGVLNA 476 Query: 477 GQIIEKEAGY-FRPHKWW 493 G IE+ +G+ +P KWW Sbjct: 477 GLAIEQRSGFDAKPEKWW 494 >gi|296535594|ref|ZP_06897775.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseomonas cervicalis ATCC 49957] gi|296264110|gb|EFH10554.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseomonas cervicalis ATCC 49957] Length = 494 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 264/487 (54%), Positives = 352/487 (72%), Gaps = 4/487 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + ++ +R L +++ISAVEL +++ A+E N ++NAYI V + A A AE +D Sbjct: 1 MTAPTDLTIAGARAALDAREISAVELTRAHLDAVEQLNPRLNAYITVTPELALAQAEAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+A L GIP+ IKD F T G T A S IL F P YESTVT +L +GAV LG Sbjct: 61 AAIARGEAGPLAGIPLAIKDLFCTAGTRTTAGSKILGNFVPPYESTVTAQLLRDGAVFLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 K N+DEFAMGSSN +S YG +PW+ D PGGSSGGS+AAVA L + TD Sbjct: 121 KANLDEFAMGSSNLSSAYGAAENPWKRAGEPDTVLVPGGSSGGSAAAVAARLALGATATD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G GIKPTYGRCSR GII++A SLDQAG + RTV D AILL+++AG+D Sbjct: 181 TGGSIRQPAAFCGVTGIKPTYGRCSRYGIIAYASSLDQAGPVARTVEDCAILLRSMAGFD 240 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VPD+ A+ + ++G+ +GIP+EYRL+ LSP ID WQQG+ WL+ GA++ Sbjct: 241 PKDSTSADRAVPDFAAAVARGVKGLRIGIPREYRLEGLSPEIDALWQQGMEWLRAEGAEL 300 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VEISLPH +ALP YYI++PAEASSNLARYDGVR+GLR +G+D+ E+YE +R+ GFG EV Sbjct: 301 VEISLPHAGHALPTYYIVAPAEASSNLARYDGVRFGLREDGRDLKELYERSRAAGFGAEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI+IGTYVLS+ YD++Y++A+++R LIKRDF EA+ + VD ILTP TPT+AF G++ Sbjct: 361 KRRILIGTYVLSAGYYDAYYVKAQQVRALIKRDFDEAWGK-VDAILTPATPTAAF--GRD 417 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + NDVFT+ N+AG+P +++PA L K +PLGLQ++G+PF EETLF++G Sbjct: 418 ETQDDPVAMYLNDVFTITANLAGIPGMALPAGLDAKGLPLGLQILGRPFDEETLFAIGGA 477 Query: 480 IEKEAGY 486 IE+ A + Sbjct: 478 IERAADF 484 >gi|51473351|ref|YP_067108.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia typhi str. Wilmington] gi|81610826|sp|Q68XL6|GATA_RICTY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|51459663|gb|AAU03626.1| Glu-AdT [Rickettsia typhi str. Wilmington] Length = 493 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 254/484 (52%), Positives = 348/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ ELV+++I+ IE + +NAY+ A AEE+D Sbjct: 1 MTELNKLTVADSVKGLKNKDFTSKELVNAHIKQIEKYKN-LNAYVTETFDLALKQAEEAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + AR LEGIP +KD F TKGI T ACS+IL F PHYES+VT+ ++D G VMLG Sbjct: 60 QNYAQNKARTLEGIPFAVKDLFCTKGIRTTACSNILKNFIPHYESSVTKNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSTNITSCFGNVISPWKANDDNSDLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +N VP+ + A+ S++ M +G+P + I K W I LK+AGA+I Sbjct: 240 KDSTSINAKVPELQSAIGSSMKNMKIGVPLSLGEGGIIEHDIMKMWHDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEA+SNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEAASNLSRYDGVRYGLRVEYENMTLDEMYEMTRSAGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTYVLSS C D++Y +A+K+R L+ DF AF + V+ IL PT P++AF +G Sbjct: 360 EVKRRIMLGTYVLSSNCMDAYYFKAQKVRRLVANDFNNAFTK-VNAILLPTAPSAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP +SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCVSVPAGLSARGLPLGMQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|157828068|ref|YP_001494310.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932766|ref|YP_001649555.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia rickettsii str. Iowa] gi|166217711|sp|A8GQX7|GATA_RICRS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189045259|sp|B0BWC3|GATA_RICRO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157800549|gb|ABV75802.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907853|gb|ABY72149.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rickettsia rickettsii str. Iowa] Length = 493 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/484 (53%), Positives = 348/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ EL+ ++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSIKGLKNKDFTSAELIGAHIKQIEK-HRNLNAYVTETFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNNARTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G+ISFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNMKMGVPLSLGEGSIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSTGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL PT+PT+AF +G Sbjct: 360 EVKRRIMIGTYVLSSSGMDAYYLKAQKVRRLVANDFNNAFAK-VDAILLPTSPTAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E T+ V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGIQIIGKQLDEYTVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|15604028|ref|NP_220543.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia prowazekii str. Madrid E] gi|6225416|sp|Q9ZE10|GATA_RICPR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|3860719|emb|CAA14620.1| GLUTAMYL-tRNA AMIDOTRANSFERASE SUBUNIT A (gatA) [Rickettsia prowazekii] gi|292571747|gb|ADE29662.1| Glutamyl-tRNA(Gln)amidotransferase subunit A [Rickettsia prowazekii Rp22] Length = 493 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 255/484 (52%), Positives = 345/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V+ES L++KD ++ ELV++YI+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVAESVKGLKNKDFTSKELVNAYIKQIEKYKN-LNAYVTETFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + AR LEGIP +KD F TKGI T ACS+IL F PHYES+VTQ ++D G V+LG Sbjct: 60 QNYGQNKARTLEGIPFAVKDLFCTKGIRTTACSNILKNFIPHYESSVTQNIFDKGGVILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+ F+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNSDLVPGGSSGGSAAAVSAFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +N VP+ + A+ S++ M +G+P + I K W I LK+AGA+I Sbjct: 240 KDSTSINAQVPELQSAIGSSMKNMKIGVPLSLGEGGIIEHDIMKMWHDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEA+SNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEAASNLSRYDGVRYGLRVECENMTLDEMYEMTRSAGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTYVLSS C D++Y +A+K+R L+ DF AF + V+ IL PT P++AF +G Sbjct: 360 EVKRRIMLGTYVLSSHCMDAYYFKAQKVRRLVANDFNNAFAK-VNAILLPTAPSAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 K++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 KKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGMQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|229586392|ref|YP_002844893.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia africae ESF-5] gi|259647222|sp|C3PMJ0|GATA_RICAE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|228021442|gb|ACP53150.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rickettsia africae ESF-5] Length = 493 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/484 (53%), Positives = 346/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ EL+ ++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSIKGLKNKDFTSTELIGAHIKQIE-KHRNLNAYVTDTFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNNARTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G+ISFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNMKIGVPLSLGEGSIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSTGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL PT PT+AF +G Sbjct: 360 EVKRRIMIGTYVLSSSGMDAYYLKAQKVRRLVANDFNNAFAK-VDAILLPTAPTAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGIQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|15892117|ref|NP_359831.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia conorii str. Malish 7] gi|20454920|sp|Q92J75|GATA_RICCN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|15619244|gb|AAL02732.1| glutamyl-tRNA amidotransferase subunit A [Rickettsia conorii str. Malish 7] Length = 493 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 257/484 (53%), Positives = 346/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ EL+ ++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSIKGLKNKDFTSTELIGAHIKQIEK-HRNLNAYVTDTFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ +AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QKYAQNNARTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G+ISFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNMKIGVPLSLGEGSIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSTGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL P PT+AF +G Sbjct: 360 EVKRRIMIGTYVLSSSGMDAYYLKAQKVRRLVANDFNNAFAK-VDAILLPAAPTAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGIQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|330994859|ref|ZP_08318781.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter sp. SXCC-1] gi|329758120|gb|EGG74642.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter sp. SXCC-1] Length = 497 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 262/469 (55%), Positives = 342/469 (72%), Gaps = 3/469 (0%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++++ LR++ SA ELV ++ AI N ++NAYI + A AA ++D + Sbjct: 6 LTELTIADAAAGLRARKFSAAELVGAHNAAIAALNPRLNAYITTTSDAALQAAAQADAAL 65 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A+ L GIP+GIKD F TKG+ T A S+IL F P YESTVT L +GAV +GK N Sbjct: 66 GKGEAKPLTGIPLGIKDLFCTKGVRTTAASNILKNFVPPYESTVTANLLRDGAVFVGKTN 125 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +DEFAMGS+N TS +GPV +PW+ PGGSSGGS+AAVA L + GTDTGGS Sbjct: 126 LDEFAMGSANITSAFGPVENPWKRRGDDAALVPGGSSGGSAAAVAAGLAMGATGTDTGGS 185 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA++ G VG+KPTYGRCSR G I++A SLDQAG + RTVRD AILL+++AG+D D+ Sbjct: 186 IRQPAAYCGIVGLKPTYGRCSRFGTIAYASSLDQAGPMARTVRDCAILLQSMAGFDARDS 245 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VN VPDY A+ +S++G+ VGIP EYR + LS I+ WQQGI+WLKDAG +IV++S Sbjct: 246 TSVNCDVPDYSAAIGRSLKGLKVGIPAEYRAEGLSAEIEAAWQQGINWLKDAGCEIVDVS 305 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPHT+Y L YYI++PAE SSNLARYDG+R+G RV G + MYE TR GFG EV+ RI Sbjct: 306 LPHTKYGLATYYIVAPAECSSNLARYDGLRFGERVPGDTLDAMYEATRRAGFGPEVRRRI 365 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTYVLS+ YD++YL+A+K+R+LI+RDFTE+F+Q VDV+LTPT PT AF G++ ++ Sbjct: 366 MMGTYVLSAGYYDAYYLKAQKVRSLIRRDFTESFQQ-VDVLLTPTAPTPAFAQGEQSDDP 424 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 M ND+FTV +MAG+PA+SVP L +PLGLQLIG+PF EET Sbjct: 425 VQM--YLNDIFTVPASMAGMPAMSVPVGLGTTGLPLGLQLIGRPFDEET 471 >gi|34580852|ref|ZP_00142332.1| glutamyl-tRNA amidotransferase subunit A [Rickettsia sibirica 246] gi|28262237|gb|EAA25741.1| glutamyl-tRNA amidotransferase subunit A [Rickettsia sibirica 246] Length = 493 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 257/484 (53%), Positives = 345/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ EL+ ++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSIKGLKNKDFTSTELIGAHIKQIE-KHRNLNAYVTDTFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNNARTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G+ISFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKTEVPELQSAIGSSMKNMKIGVPLSLGEGSIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVEHENMTLDEMYEMTRSTGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL P PT+AF +G Sbjct: 360 EVKRRIMIGTYVLSSSGMDAYYLKAQKVRRLVANDFNNAFAK-VDAILLPAAPTAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGIQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|67459521|ref|YP_247145.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia felis URRWXCal2] gi|75536072|sp|Q4UKF1|GATA_RICFE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|67005054|gb|AAY61980.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rickettsia felis URRWXCal2] Length = 493 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 256/484 (52%), Positives = 344/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ ELV+++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSVKGLKNKDFTSKELVNAHIKQIE-KHKNLNAYVTETFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNQPQTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNMKIGVPLSLGEGGIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSAGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS C D++YL+A+K+R L+ DF AF + VD IL P PT AF +G Sbjct: 360 EVKRRIMIGTYVLSSSCMDAYYLKAQKVRRLVANDFNNAFAK-VDAILLPAAPTEAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGMQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|238650361|ref|YP_002916213.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia peacockii str. Rustic] gi|259647223|sp|C4K0R4|GATA_RICPU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|238624459|gb|ACR47165.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia peacockii str. Rustic] Length = 493 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 256/484 (52%), Positives = 345/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ EL+ ++I+ IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSIKGLKNKDFTSTELIGAHIKQIE-KHRNLNAYVTETFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNNARTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G+ISFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNMKIGVPLSLGEGSIIEPDIMKMWQDTIELLKNAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDG+RYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGIRYGLRVERENMTLDEMYEMTRSTGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL P PT+AF +G Sbjct: 360 EVKRRIMIGTYVLSSSGMDAYYLKAQKVRRLVANDFNNAFAK-VDAILLPAAPTAAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGIQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|157803340|ref|YP_001491889.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia canadensis str. McKiel] gi|166217710|sp|A8EXM1|GATA_RICCK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157784603|gb|ABV73104.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia canadensis str. McKiel] Length = 493 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 250/484 (51%), Positives = 346/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + +++S L++KD ++ ELV+++IQ IE + +NAY+ A A+ +D Sbjct: 1 MTELNKLTLADSIKGLKNKDFTSTELVNAHIQQIE-KHKNLNAYVTKTFDLALKGAQIAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ +++NG VMLG Sbjct: 60 QNYAQNKARTLEGIPFAAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFNNGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMG++N TS +G VI+PW++ + PGGSSGGS+A+V+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGAANITSCFGNVINPWKANNDNSDLVPGGSSGGSAASVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DSAI+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSAIMLEAMMGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP + A+ S++ M +G+P + P + K WQ I LK+AG +I Sbjct: 240 KDSTSLKAEVPQLQSAIGSSVKNMKIGVPLSLGEGSIIEPDVMKMWQDTIELLKNAGTEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LP+ +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 300 VDITLPYAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSAGFGE 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS C D++YL+A+K+R+L+ DF AF + VD IL P P+ AF +G Sbjct: 360 EVKRRIMIGTYVLSSSCMDAYYLKAQKVRSLVANDFNNAFTK-VDTILLPAAPSEAFKIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP +SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCVSVPAGLSARGLPLGMQIIGKQLDEYNVLKVA 476 Query: 478 QIIE 481 IE Sbjct: 477 STIE 480 >gi|148259882|ref|YP_001234009.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidiphilium cryptum JF-5] gi|146401563|gb|ABQ30090.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acidiphilium cryptum JF-5] Length = 493 Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust. Identities = 262/468 (55%), Positives = 346/468 (73%), Gaps = 4/468 (0%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K +SAVEL ++++ A+E N ++NA+I + A A +D G+A L GIPI + Sbjct: 18 KKVSAVELAEAHVAAVEALNPRLNAFITTTPELALEQARAADDARAKGEAPALAGIPIAM 77 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T+G+ T A S IL+ F P YESTV+ KL GAVMLGK N+DEFAMGSSN TS Y Sbjct: 78 KDLFCTEGVRTTAGSKILEPFVPPYESTVSGKLKAAGAVMLGKANLDEFAMGSSNITSGY 137 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GPV +PW+ D K PGGSSGGS+AAVA + + GTDTGGSIRQPA+F+G GIKP Sbjct: 138 GPVENPWQRADGA-KLVPGGSSGGSAAAVAARMAMGATGTDTGGSIRQPAAFSGIAGIKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGRCSR GII+FA SLDQAG + RTV D AILL+ ++G+D D+T VPD+ A + Sbjct: 197 TYGRCSRFGIIAFASSLDQAGPMARTVEDCAILLREMSGFDPRDSTSAERAVPDFRAACE 256 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + ++G+ +GIP EYR++ + I+K WQ GI WLK GA+IV++SLPHT+Y LP YYI++ Sbjct: 257 RGVKGLRIGIPAEYRVEGMPREIEKLWQDGIDWLKREGAEIVDVSLPHTKYGLPVYYIVA 316 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 PAEASSNLARYDGVR+G RVEGKD++++YE TR+ GFG+EVK RIMIGTYVLS+ YD++ Sbjct: 317 PAEASSNLARYDGVRFGARVEGKDLIDLYERTRAAGFGEEVKRRIMIGTYVLSAGYYDAY 376 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 YL+A+K+R LI RDF EAF + VD +LTPT P++AF LG++ ++ +M NDVFTV Sbjct: 377 YLKAQKVRALILRDFQEAFGK-VDALLTPTAPSAAFALGEKMDDPVTM--YLNDVFTVPA 433 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ++AG+P +SVPA L +PLGLQ+IG+ F EET+F+V ++E+ AG+ Sbjct: 434 SLAGVPGMSVPAGLDAAGLPLGLQVIGRHFDEETVFAVSSVLERAAGF 481 >gi|326403188|ref|YP_004283269.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acidiphilium multivorum AIU301] gi|325050049|dbj|BAJ80387.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acidiphilium multivorum AIU301] Length = 493 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 262/468 (55%), Positives = 345/468 (73%), Gaps = 4/468 (0%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K +SAVEL ++++ A+E N ++NA+I + A A +D G+A L GIPI + Sbjct: 18 KKVSAVELAEAHVAAVEALNPRLNAFITTTPELALEQARAADDARAKGEAPALAGIPIAM 77 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T+G+ T A S IL+ F P YESTV+ KL GAVMLGK N+DEFAMGSSN TS Y Sbjct: 78 KDLFCTEGVRTTAGSRILEPFVPPYESTVSGKLKAAGAVMLGKANLDEFAMGSSNITSGY 137 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GPV +PW+ D K PGGSSGGS+AAVA + + GTDTGGSIRQPA+F+G GIKP Sbjct: 138 GPVENPWQRADGA-KLVPGGSSGGSAAAVAARMAMGATGTDTGGSIRQPAAFSGIAGIKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGRCSR GII+FA SLDQAG + RTV D AILL+ ++G+D D+T VPD+ A Sbjct: 197 TYGRCSRFGIIAFASSLDQAGPMARTVEDCAILLREMSGFDPRDSTSAERAVPDFRAACG 256 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + ++G+ +GIP EYR++ + I+K WQ GI WLK GA+IV++SLPHT+Y LP YYI++ Sbjct: 257 RGVKGLRIGIPAEYRVEGMPREIEKLWQDGIDWLKREGAEIVDVSLPHTKYGLPVYYIVA 316 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 PAEASSNLARYDGVR+G RVEGKD++++YE TR+ GFG+EVK RIMIGTYVLS+ YD++ Sbjct: 317 PAEASSNLARYDGVRFGARVEGKDLIDLYERTRAAGFGEEVKRRIMIGTYVLSAGYYDAY 376 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 YL+A+K+R LI RDF EAF + VD +LTPT P++AF LG++ ++ +M NDVFTV Sbjct: 377 YLKAQKVRALILRDFQEAFGK-VDALLTPTAPSAAFALGEKMDDPVTM--YLNDVFTVPA 433 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ++AG+P +SVPA L +PLGLQ+IG+ F EET+F+V ++E+ AG+ Sbjct: 434 SLAGVPGMSVPAGLDAAGLPLGLQVIGRHFDEETVFAVSSVLERAAGF 481 >gi|157964219|ref|YP_001499043.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia massiliae MTU5] gi|157843995|gb|ABV84496.1| Glutamyl-tRNA amidotransferase subunit A [Rickettsia massiliae MTU5] Length = 495 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 255/484 (52%), Positives = 342/484 (70%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ EL+ ++I+ IE + +NAY+ A AE +D Sbjct: 3 MTELNKLTVADSIKGLKNKDFTSTELIGAHIKQIEK-HRNLNAYVTETFDLALKQAEAAD 61 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + AR LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 62 QNYAQNTARTLEGIPFTAKDLFCTKGIRTTACSNILKNFIPNYESSVTQNIFDKGGVMLG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGG++AAV+GF+ +A++G+DT Sbjct: 122 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGAAAAVSGFMASAALGSDT 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G+ISFA SLDQAGI TR+V DS+I+L+ + G+DE Sbjct: 182 GGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEVMMGFDE 241 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VP+ + A+ S++ M +G+P + P I K WQ I LK+AGA+I Sbjct: 242 KDSTSIKAEVPELQSAIGSSMKNMKIGVPLSLGEGSIIEPDIMKMWQDTIELLKNAGAEI 301 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 V+I+LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+ Sbjct: 302 VDITLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSAGFGE 361 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D +YL+A+K+R L+ DF AF + VD IL P PT+AF +G Sbjct: 362 EVKRRIMIGTYVLSSSGMDEYYLKAQKVRRLVANDFNNAFAK-VDAILLPAAPTAAFKIG 420 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP SVPA L + +PLG+Q+IG+ E + V Sbjct: 421 EKQNDPTIM--YLNDLFTIPASLAGLPCASVPAGLSARGLPLGMQIIGKQLDEYNVLKVA 478 Query: 478 QIIE 481 IE Sbjct: 479 STIE 482 >gi|83310684|ref|YP_420948.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase [Magnetospirillum magneticum AMB-1] gi|82945525|dbj|BAE50389.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase [Magnetospirillum magneticum AMB-1] Length = 421 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/417 (60%), Positives = 319/417 (76%), Gaps = 4/417 (0%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 ++G+PIGIKD F T+G+ T A SHIL+GF+P YESTV+ KL GA+ LGKLN+DEFAMG Sbjct: 1 MDGLPIGIKDLFCTEGVQTTAASHILEGFKPPYESTVSGKLKAAGAISLGKLNLDEFAMG 60 Query: 131 SSNETSYYGPVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 SSN+TSY+G V +PW+ + D K PGGSSGGS+AAVA + + GTDTGGSIRQPA+ Sbjct: 61 SSNQTSYFGAVENPWKKTSDPKAKLVPGGSSGGSAAAVAARMVLGATGTDTGGSIRQPAA 120 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G GIKPTYGRCSR GI++FA SLDQAG + RTVRD AI+L A+AG+D D+T VN+ Sbjct: 121 FCGITGIKPTYGRCSRFGIVAFASSLDQAGPMARTVRDCAIMLGAMAGHDPKDSTSVNMA 180 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VPD+ERAL I+G+ VGIPKEYR D LS + K W +GI WLK AGA VEISLPHT+Y Sbjct: 181 VPDFERALTGDIRGLKVGIPKEYRPDGLSDEVAKVWDRGIEWLKAAGATPVEISLPHTKY 240 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 AL YYII+PAE SSNLARYDG+RYGLRV GK + +MY+ +R+ GFG EV+ RI+IGTYV Sbjct: 241 ALATYYIIAPAECSSNLARYDGLRYGLRVPGKTLDDMYKKSRAAGFGAEVRRRILIGTYV 300 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ YD++Y +A+K+R LI DF +AFE VDVILTPT P++AF +G+ ++ +M Sbjct: 301 LSAGYYDAYYAKAQKVRRLIAEDFRKAFET-VDVILTPTAPSAAFGMGEGTDDPVTM--W 357 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 NDVFT+ +MAGLP +S+PA L +PLGLQLIG+PF EET+F V ++E A + Sbjct: 358 LNDVFTIPTSMAGLPGLSLPAGLSADGLPLGLQLIGRPFDEETVFRVAGVMETAANF 414 >gi|157825333|ref|YP_001493053.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia akari str. Hartford] gi|166217708|sp|A8GMC0|GATA_RICAH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157799291|gb|ABV74545.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia akari str. Hartford] Length = 492 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 252/483 (52%), Positives = 341/483 (70%), Gaps = 6/483 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + V++S L++KD ++ ELV+++I IE + +NAY+ A AE +D Sbjct: 1 MTELNKLTVADSIKGLKNKDFTSKELVNAHITQIE-KHRNLNAYVTETFDLALKQAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + R LEGIP KD F TKGI T ACS+IL F P+YES+VTQ ++D G VMLG Sbjct: 60 QNYAQNQPRTLEGIPFAAKDLFCTKGIRTTACSNILKNFVPNYESSVTQNIFDKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW++ D PGGSSGGS+AAV+GF+ +A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+D Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDA 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + VP+ + A+ S++ + +G+P + P + K WQ I LK+AGA+IV Sbjct: 240 KDSTSIKAEVPELQSAIGSSMKNIKIGVPLNLGEGGIEPDVMKIWQDTIELLKNAGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQE 358 +I LPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG+E Sbjct: 300 DIILPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVERENMTLDEMYEMTRSAGFGEE 359 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLSS C D++YL+A+K+R L+ DF AFE+ VD I+ P PT AF + + Sbjct: 360 VKRRIMIGTYVLSSNCMDAYYLKAQKVRRLVANDFNNAFEK-VDAIVLPAAPTEAFKIAE 418 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++N+ M ND+FT+ ++AGLP S+PA L + +PLG+Q+IG+ E + V Sbjct: 419 KQNDPTIM--YLNDLFTIPASLAGLPCASIPAGLSARGLPLGMQIIGKQLDEYNVLKVAS 476 Query: 479 IIE 481 IE Sbjct: 477 TIE 479 >gi|91205949|ref|YP_538304.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia bellii RML369-C] gi|109891982|sp|Q1RHE9|GATA_RICBR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91069493|gb|ABE05215.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rickettsia bellii RML369-C] Length = 493 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 257/484 (53%), Positives = 350/484 (72%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN ++V++S L++K+ ++ ELV+++I+ IE + +NAY+ A AEE+D Sbjct: 1 MTELNKLSVADSLKGLKNKEFTSKELVNAHIKQIEK-HKNLNAYVTETFDLALKQAEEAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +R LEGIP KD F TKGI T ACS+IL F P+YES VTQ +++ G VMLG Sbjct: 60 QSYAKNHSRTLEGIPFAAKDLFCTKGIRTTACSNILREFIPNYESGVTQNIFNKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW+++D PGGSSGGS+AAV+GF+ A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKALDDGADLVPGGSSGGSAAAVSGFMATAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMIGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + + VP + A+ SI+GM +G+P + P I K W I LKDAGA+I Sbjct: 240 RDSTSIKMEVPQLQPAIGSSIKGMKIGVPLSLGEGGIIEPDIMKMWHSTIELLKDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 ++ISLPHT+Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG Sbjct: 300 IDISLPHTKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVEKENMSLDEMYEITRSSGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL P+ PT AF +G Sbjct: 360 EVKRRIMIGTYVLSSSFMDAYYLKAQKVRRLVADDFNNAFAK-VDAILLPSAPTEAFRIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ ++ ++ ND+FT+ ++AGLP +SVPA L + +PLG+Q+IG+ E + V Sbjct: 419 EKQNDP-TITYL-NDLFTIPASLAGLPCVSVPAGLSNRGLPLGMQVIGKQLDEYNVLRVA 476 Query: 478 QIIE 481 IE Sbjct: 477 SAIE 480 >gi|114327616|ref|YP_744773.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Granulibacter bethesdensis CGDNIH1] gi|122327413|sp|Q0BTK2|GATA_GRABC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|114315790|gb|ABI61850.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Granulibacter bethesdensis CGDNIH1] Length = 499 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 263/491 (53%), Positives = 358/491 (72%), Gaps = 5/491 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + ++E+RD LR+K SA EL D+++ AIE N ++NAYI V +ARA A +D Sbjct: 1 MSALTDLTIAEARDGLRAKRFSARELTDAHLGAIEALNPRLNAYITVTPDQARAQAAAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + +G+A L GIP+ KD F ++GI T A S IL+ F P YES VT+++ +GAV+LG Sbjct: 61 RVLASGEAGALTGIPVASKDMFCSEGIRTTAGSRILENFVPPYESAVTERMLRDGAVILG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMGS+N TS YGPV +PW+ D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KANLDEFAMGSANLTSAYGPVENPWKRHDDDAVLVPGGSSGGSAAAVAAHLALGATGTDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS+ G GIKPTYGRCSR GI+++A SLDQAG RTVRD+AILL+++AG+D Sbjct: 181 GGSIRQPASYCGIAGIKPTYGRCSRWGIVAYASSLDQAGPFARTVRDNAILLRSMAGHDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPD+E A + ++G+ +G+P+EY D +S I WQ G + L+ AGA++V Sbjct: 241 RDSTSAMREVPDFEAACQRGVKGLRIGLPREYVADGMSEEIRTLWQNGAAMLRAAGAEVV 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 ++SLPHT++AL +YYII+PAEASSNLARYDGVR+G R + +D+ ++YE +R+ GFG EV Sbjct: 301 DVSLPHTKHALASYYIIAPAEASSNLARYDGVRFGHRSSDNRDLNDLYERSRAEGFGAEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTYVLS+ YD++YL+A+K+R LI RDF EAF + VD +LTPT P++AF G+ Sbjct: 361 KRRIMVGTYVLSAGYYDAYYLKAQKVRALIARDFAEAF-RSVDALLTPTAPSAAFAQGET 419 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ +M NDVFTV +N+AGLPA+S+PA L +PLGLQ+IG+ F EET+F+V Sbjct: 420 IDDPVAM--YLNDVFTVPINLAGLPAMSIPAGLSTTGLPLGLQIIGRAFDEETVFAVSAA 477 Query: 480 IEKEAGY-FRP 489 +E+ A + RP Sbjct: 478 LEQAAAFTHRP 488 >gi|157826690|ref|YP_001495754.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia bellii OSU 85-389] gi|166217709|sp|A8GV46|GATA_RICB8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157801994|gb|ABV78717.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rickettsia bellii OSU 85-389] Length = 493 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 256/484 (52%), Positives = 345/484 (71%), Gaps = 7/484 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN ++V++S L++K+ ++ ELV+++I+ IE + +NAY+ A AEE+D Sbjct: 1 MTELNKLSVADSLKGLKNKEFTSKELVNAHIKQIEK-HKNLNAYVTETFDLALKQAEEAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +R LEGIP KD F TKGI T ACS+IL F P+YES VTQ +++ G VMLG Sbjct: 60 QSYAKNHSRTLEGIPFAAKDLFCTKGIRTTACSNILREFIPNYESGVTQNIFNKGGVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N TS +G VISPW+++D PGGSSGGS+AAV+GF+ A++G+DT Sbjct: 120 KTNMDEFAMGSANITSCFGNVISPWKALDDGADLVPGGSSGGSAAAVSGFMATAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASFTG VG KPTYGRCSR G++SFA SLDQAGI TR+V DS+I+L+A+ G+DE Sbjct: 180 GGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMIGFDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + + VP + A+ SI+GM +G+P + P I K W I LKDAGA+I Sbjct: 240 RDSTSIKMEVPQLQPAIGSSIKGMKIGVPLSLGEGGIIEPDIMKMWHSTIELLKDAGAEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQ 357 ++ISLPH +Y + YY+I+PAEASSNL+RYDGVRYGLRVE +++ EMYE TRS GFG Sbjct: 300 IDISLPHAKYGVAVYYVIAPAEASSNLSRYDGVRYGLRVEKENMSLDEMYEITRSSGFGD 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTYVLSS D++YL+A+K+R L+ DF AF + VD IL P+ PT AF +G Sbjct: 360 EVKRRIMIGTYVLSSSFMDAYYLKAQKVRRLVADDFNNAFAK-VDAILLPSAPTEAFRIG 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++N+ M ND+FT+ ++AGLP +SVPA L + +PLG+Q+I + E + V Sbjct: 419 EKQNDPTIM--YLNDLFTIPASLAGLPCVSVPAGLSNRGLPLGMQVICKQLDEYNVLRVA 476 Query: 478 QIIE 481 IE Sbjct: 477 SAIE 480 >gi|68171153|ref|ZP_00544561.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88657601|ref|YP_507508.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ehrlichia chaffeensis str. Arkansas] gi|109829723|sp|Q2GGC5|GATA_EHRCR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|67999423|gb|EAM86064.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88599058|gb|ABD44527.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ehrlichia chaffeensis str. Arkansas] Length = 487 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 260/490 (53%), Positives = 347/490 (70%), Gaps = 12/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + ++++E D L+ ++ SAVEL +I+A+ +N ++NA+I + A +AAE++D Sbjct: 1 MKNILKLSIAEMHDNLKKREFSAVELTKLHIEAV--NNEKLNAFITKTPEIALSAAEKAD 58 Query: 61 KRIING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + L GIP+GIKD F TK + T ACS+IL F P Y+STVT++L DNGAVM Sbjct: 59 YIFTHQKENLTPLTGIPVGIKDLFCTKHVRTTACSNILKNFTPQYDSTVTKRLLDNGAVM 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +G V +PW D + PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 119 LGKLNMDEFAMGSSNSNSCFGHVKNPWVRADGVEV-VPGGSSGGSSAAVAGFLCAGALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+ G VG+KPTYGRCSR G+I+FA SLDQAG++TRTV D++++L++I GY Sbjct: 178 DTGGSVRQPAALCGIVGLKPTYGRCSRFGMIAFASSLDQAGVLTRTVEDASLMLQSICGY 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD--YLSPT-IDKTWQQGISWLKDA 295 D D+T N+ VP + ++ +I+G +GIPKEY L Y T + + W +GI +LKD Sbjct: 238 DIQDSTSANIAVPKFSESITHTIKGKRIGIPKEYELSGKYQEYTEVSEMWAKGIQYLKDE 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA+I+EISLPHT YALP YYII AEASSNLARYDG+RYG R+ DI EMYE TR F Sbjct: 298 GAEIIEISLPHTSYALPVYYIICSAEASSNLARYDGIRYGARISSDDINEMYELTRGHNF 357 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI+IG YVLSS YD++Y +A++IR L+ DF E+F++ +D ILTPTTP AF Sbjct: 358 GTEVKRRILIGAYVLSSGYYDAYYNKAQRIRHLVINDFVESFKK-IDYILTPTTPKEAFA 416 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + ++ + ++ NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + + Sbjct: 417 INEQLD---TLTMYLNDVFTVPASLAGLPAISVPIGLSKSNLPLSLQVIGNYYDEGGILN 473 Query: 476 VGQIIEKEAG 485 V IIEK G Sbjct: 474 VASIIEKHTG 483 >gi|71083765|ref|YP_266485.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter ubique HTCC1062] gi|109891967|sp|Q4FLQ7|GATA_PELUB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|71062878|gb|AAZ21881.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter ubique HTCC1062] Length = 485 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 259/495 (52%), Positives = 352/495 (71%), Gaps = 14/495 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + ++E ++ K IS+ E ++I E S +N YI A A+ D Sbjct: 1 MSDITSLTLTELVKNIKDKKISSEETTKAFIDRGEKSR-DLNTYITEDFSNALLKAKSFD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ N D + L G+PI +KD F TK + T A S IL+ F P YESTVTQ +W+ GA++LG Sbjct: 60 QKP-NFDLK-LPGVPIAVKDLFCTKDVKTTAGSKILNNFIPPYESTVTQNIWNEGAILLG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN DEFAMGSSNETS++G V SP DK PGGSSGGS++A+A L +IGTD Sbjct: 118 KLNCDEFAMGSSNETSFFGNVQSP------IDKGLVPGGSSGGSASALAANLTPITIGTD 171 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASFTGTVG+KPTYG CSR GI++FA SLDQAG +++ V+D A+L + I+ YD Sbjct: 172 TGGSIRQPASFTGTVGLKPTYGSCSRYGIVAFASSLDQAGPMSKDVKDCALLQEIISTYD 231 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E D+T ++ +Y + L +I+G +GIPKEYR+D + I+ W +GI + KD GA+I Sbjct: 232 EKDSTSIDFKRNEYSKELTNNIKGKKIGIPKEYRVDGMPKEIEDLWTKGIEYAKDCGAEI 291 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VEISLPHT YALP YYI++PAEASSNLARYDGV+YG R +G+++++MYE TRS GFG EV Sbjct: 292 VEISLPHTNYALPTYYIVAPAEASSNLARYDGVKYGFRSKGENLIDMYEKTRSEGFGSEV 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIMIGTYVLSS YD++YL+A+K+R LIK DF EA+++ VD ILTP+TP++AF +G++ Sbjct: 352 QRRIMIGTYVLSSGYYDAYYLKAQKVRKLIKNDFDEAYKK-VDAILTPSTPSAAFKIGEK 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ SM ND+FTV VN+AGLPAIS+PA + K PLGLQ+IG+ F E+ + ++ Sbjct: 411 TNDPVSM--YLNDIFTVPVNLAGLPAISIPAGIDVKGYPLGLQIIGKAFDEQNILNIAYA 468 Query: 480 IEKEAGY-FRPHKWW 493 +E++ + + WW Sbjct: 469 MEEKIQFKNKITDWW 483 >gi|258543589|ref|YP_003189022.1| amidotransferase subunit alpha [Acetobacter pasteurianus IFO 3283-01] gi|256634667|dbj|BAI00643.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-01] gi|256637723|dbj|BAI03692.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-03] gi|256640777|dbj|BAI06739.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-07] gi|256643832|dbj|BAI09787.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-22] gi|256646887|dbj|BAI12835.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-26] gi|256649940|dbj|BAI15881.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-32] gi|256652930|dbj|BAI18864.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655984|dbj|BAI21911.1| amidotransferase A subunit for Asp-tRNA(Asn)/Glu-tRNA(Gln) [Acetobacter pasteurianus IFO 3283-12] Length = 495 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 261/485 (53%), Positives = 351/485 (72%), Gaps = 5/485 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK-ARAAAEESDKR 62 L + ++++R+ L ++ SA EL + + AI N +NAYI V+ ++ AAA+ +D R Sbjct: 2 LTGLTLTQAREGLAARKFSARELAKAQMDAIARLNPVLNAYITVLPEETVLAAADAADAR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G A ++G+PIG+KD F TKG+ T A S +L+ F P YESTVT L GAV LGK Sbjct: 62 YAAGTAGLMDGLPIGVKDLFCTKGVRTTAASKMLENFVPPYESTVTANLLKAGAVFLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGS+N TS +GPV SPW R D + PGGSSGGSSAAVA L A+ GTDTG Sbjct: 122 NLDEFAMGSANITSAFGPVASPWKRKDDPSATLVPGGSSGGSSAAVAAGLGLAATGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA++ G VG+KPTYGRCSR G I+FA SLDQAG +TR+V D+ ++L+A+AG+DE Sbjct: 182 GSIRQPAAYCGIVGLKPTYGRCSRWGTIAFASSLDQAGPMTRSVADAGLMLEAMAGFDEK 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+TC N PVP + +A+ +S++G+ VGIP EYR L + W+QGI+WLK+AG +IV+ Sbjct: 242 DSTCSNRPVPAFSKAVGKSVKGLRVGIPTEYRSPNLPAEVVAMWEQGIAWLKEAGCEIVD 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLPHT+Y L YYII+PAE SSNLARYDG+R+G+R + + +YE TR+ GFG EV++ Sbjct: 302 VSLPHTKYGLTTYYIIAPAECSSNLARYDGIRFGIRKDAPTLDGVYEATRAAGFGAEVRN 361 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS+ YD++YL+A+K+RTLIKRDF +AFE VDV+LTPT P++AF G EN Sbjct: 362 RILMGTYVLSAGYYDAYYLKAQKVRTLIKRDFEQAFEN-VDVLLTPTAPSAAFAQG--EN 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + ND+FTV +MAG+PA+SVP L +PLGLQ+IG+ F EET+ S+G +E Sbjct: 419 MDDPVQMYLNDIFTVPASMAGVPALSVPVGLNGNGLPLGLQVIGKHFDEETVLSIGGALE 478 Query: 482 KEAGY 486 AG+ Sbjct: 479 AAAGF 483 >gi|73666977|ref|YP_302993.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ehrlichia canis str. Jake] gi|72394118|gb|AAZ68395.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ehrlichia canis str. Jake] Length = 500 Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust. Identities = 259/492 (52%), Positives = 346/492 (70%), Gaps = 16/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++++E D+L+ ++ SAVEL +I+A++N ++NA++ + A +AAE++D Sbjct: 14 MKDILKLSIAEMHDKLKKREFSAVELTKLHIEAVDNE--KLNAFVTKTPEIALSAAEKAD 71 Query: 61 KRIING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + L GIP+GIKD F TK + T ACS+IL F P Y+STVT+ L +NGAVM Sbjct: 72 HIFTHQQENLTPLTGIPVGIKDLFCTKNVRTTACSNILKNFIPQYDSTVTKLLLNNGAVM 131 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +G V +PW D + PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 132 LGKLNMDEFAMGSSNSNSCFGNVKNPWIRADGAEV-VPGGSSGGSSAAVAGFLCAGALGS 190 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYGRCSRLG+I+FA SLDQAG++TRTV DSA++L++I GY Sbjct: 191 DTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVEDSALMLQSICGY 250 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQGISWLK 293 D D T VN+ VP + ++ I+G +GIPKEY L +Y I + W +GI +LK Sbjct: 251 DTQDPTSVNINVPKFSESITHKIKGTRIGIPKEYELSEKHKEY--AEISEMWSKGIQYLK 308 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 D GA+I+EISLPHT YALP YYII AEASSNLARYDG+RYG R+ DI EMY+ TR Sbjct: 309 DEGAEIIEISLPHTSYALPVYYIICSAEASSNLARYDGIRYGTRISSDDINEMYKLTRGY 368 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 FG EVK RI+IG Y LSS YD++Y +A+ IR L+ DF E+F++ +D ILTPT P A Sbjct: 369 NFGTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFIESFKK-IDYILTPTAPKEA 427 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F + ++ + ++ NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + Sbjct: 428 FSINEQLD---TLTMYLNDVFTVPASLAGLPAISVPIGLSKNNLPLSLQIIGNYYDEGGI 484 Query: 474 FSVGQIIEKEAG 485 ++ IIEK G Sbjct: 485 LNLASIIEKHTG 496 >gi|109829718|sp|Q3YSB0|GATA_EHRCJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 487 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/490 (52%), Positives = 344/490 (70%), Gaps = 12/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++++E D+L+ ++ SAVEL +I+A++N ++NA++ + A +AAE++D Sbjct: 1 MKDILKLSIAEMHDKLKKREFSAVELTKLHIEAVDNE--KLNAFVTKTPEIALSAAEKAD 58 Query: 61 KRIING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + L GIP+GIKD F TK + T ACS+IL F P Y+STVT+ L +NGAVM Sbjct: 59 HIFTHQQENLTPLTGIPVGIKDLFCTKNVRTTACSNILKNFIPQYDSTVTKLLLNNGAVM 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +G V +PW D + PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 119 LGKLNMDEFAMGSSNSNSCFGNVKNPWIRADGAEV-VPGGSSGGSSAAVAGFLCAGALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYGRCSRLG+I+FA SLDQAG++TRTV DSA++L++I GY Sbjct: 178 DTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVEDSALMLQSICGY 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP---TIDKTWQQGISWLKDA 295 D D T VN+ VP + ++ I+G +GIPKEY L I + W +GI +LKD Sbjct: 238 DTQDPTSVNINVPKFSESITHKIKGTRIGIPKEYELSEKHKEYAEISEMWSKGIQYLKDE 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA+I+EISLPHT YALP YYII AEASSNLARYDG+RYG R+ DI EMY+ TR F Sbjct: 298 GAEIIEISLPHTSYALPVYYIICSAEASSNLARYDGIRYGTRISSDDINEMYKLTRGYNF 357 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI+IG Y LSS YD++Y +A+ IR L+ DF E+F++ +D ILTPT P AF Sbjct: 358 GTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFIESFKK-IDYILTPTAPKEAFS 416 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + ++ + ++ NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + + Sbjct: 417 INEQLD---TLTMYLNDVFTVPASLAGLPAISVPIGLSKNNLPLSLQIIGNYYDEGGILN 473 Query: 476 VGQIIEKEAG 485 + IIEK G Sbjct: 474 LASIIEKHTG 483 >gi|254455281|ref|ZP_05068710.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter sp. HTCC7211] gi|207082283|gb|EDZ59709.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter sp. HTCC7211] Length = 485 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/495 (52%), Positives = 356/495 (71%), Gaps = 14/495 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + +++ D +++K++S+ E+ ++I E S ++N+YI A A++ D Sbjct: 1 MPNITNQSLTSLVDNIKNKELSSEEVTKAFIDRSEKS-KELNSYISEDFSNAIDKAKKFD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N D + L GIP+ +KD F T+ + T A S IL+ F P YESTVTQ +W+ GA++LG Sbjct: 60 QNP-NFDLK-LPGIPMAVKDLFCTENVRTTAGSKILENFVPTYESTVTQNIWNEGAILLG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN DEFAMGSSNETSYYG V +P DK PGGSSGGS+AAV+G L +IGTD Sbjct: 118 KLNCDEFAMGSSNETSYYGNVQNP------IDKGLVPGGSSGGSAAAVSGQLTPITIGTD 171 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASFTGTVG+KPTYG CSR GI++FA SLDQAG + + V+D A+L + I+ YD Sbjct: 172 TGGSIRQPASFTGTVGLKPTYGSCSRYGIVAFASSLDQAGPMAQNVKDCALLQEVISTYD 231 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D+T ++ Y + L++ I+G +GIPKEYR+D + I+ WQ+GI + KD GA+I Sbjct: 232 KKDSTSIDFKRNQYSKELNKDIKGKKIGIPKEYRVDGMPKEIEDLWQKGIQYAKDCGAEI 291 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ISLP+T YALP YYI++PAEASSNLARYDGV+YG R +G+++++MYE TRS GFG EV Sbjct: 292 IDISLPNTSYALPTYYIVAPAEASSNLARYDGVKYGFRAKGENLIDMYEKTRSEGFGAEV 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIMIGTYVLSS YD++YL+A+K+R LIK DF EA++Q VD ILTP+TP+SAF +G++ Sbjct: 352 QRRIMIGTYVLSSGYYDAYYLKAQKVRKLIKNDFDEAYKQ-VDAILTPSTPSSAFKIGEK 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +++ SM ND+FTV VN+AGLPAIS+PA PLGLQ+IG+ F+E+ + V Sbjct: 411 KDDPVSM--YLNDIFTVPVNLAGLPAISIPAGHDAAGYPLGLQIIGKAFKEQEILDVAYA 468 Query: 480 IEKEAGY-FRPHKWW 493 +E++ G+ + WW Sbjct: 469 MEEKIGFKNKITDWW 483 >gi|91763199|ref|ZP_01265163.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter ubique HTCC1002] gi|91717612|gb|EAS84263.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Pelagibacter ubique HTCC1002] Length = 485 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/495 (52%), Positives = 351/495 (70%), Gaps = 14/495 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + ++E ++ K IS+ E ++I E S +N YI A A+ D Sbjct: 1 MSDITSLTLTELVKNIKDKKISSEETTKAFIDRGEKSR-DLNTYITEDFSNALLKAKSFD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ N D + L G+PI +KD F T + T A S IL+ F P YESTVTQ +W+ GA++LG Sbjct: 60 QKP-NFDLK-LPGVPIAVKDLFCTNDVKTTAGSKILNNFIPPYESTVTQNIWNEGAILLG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTD 179 KLN DEFAMGSSNETS++G V SP DK PGGSSGGS++A+A L +IGTD Sbjct: 118 KLNCDEFAMGSSNETSFFGNVQSP------IDKGLVPGGSSGGSASALAANLTPITIGTD 171 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASFTGTVG+KPTYG CSR GI++FA SLDQAG +++ V+D A+L + I+ YD Sbjct: 172 TGGSIRQPASFTGTVGLKPTYGSCSRYGIVAFASSLDQAGPMSKDVKDCALLQEIISTYD 231 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E D+T ++ +Y + L +I+G +GIPKEYR+D + I+ W +GI + KD GA+I Sbjct: 232 EKDSTSIDFKRNEYSKELTNNIKGKKIGIPKEYRVDGMPKEIEDLWTKGIEYAKDCGAEI 291 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VEISLPHT YALP YYI++PAEASSNLARYDGV+YG R +G+++++MYE TRS GFG EV Sbjct: 292 VEISLPHTNYALPTYYIVAPAEASSNLARYDGVKYGFRSKGENLIDMYEKTRSEGFGSEV 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIMIGTYVLSS YD++YL+A+K+R LIK DF EA+++ VD ILTP+TP++AF +G++ Sbjct: 352 QRRIMIGTYVLSSGYYDAYYLKAQKVRKLIKNDFDEAYKK-VDAILTPSTPSAAFKIGEK 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ SM ND+FTV VN+AGLPAIS+PA + K PLGLQ+IG+ F E+ + ++ Sbjct: 411 TNDPVSM--YLNDIFTVPVNLAGLPAISIPAGIDVKGYPLGLQIIGKAFDEQNILNIAYA 468 Query: 480 IEKEAGY-FRPHKWW 493 +E++ + + WW Sbjct: 469 MEEKIQFKNKITDWW 483 >gi|269958736|ref|YP_003328523.1| glutamyl-tRNA amidotransferase chain A [Anaplasma centrale str. Israel] gi|269848565|gb|ACZ49209.1| glutamyl-tRNA amidotransferase chain A [Anaplasma centrale str. Israel] Length = 489 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 262/489 (53%), Positives = 344/489 (70%), Gaps = 8/489 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +++ E+ L++KD SA EL ++YI A+E +NA++ + A AAA+ +D Sbjct: 4 ELLKLSILEAHRCLKNKDFSARELTEAYIGAVEQDT--LNAFVTTTPELALAAADRTDGL 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ + GIP+G+KD F TKG+ T ACS+IL F P YESTV+QKLWD+GAVMLGK Sbjct: 62 LQRGEPIHPMSGIPVGVKDLFCTKGVRTTACSNILKNFVPTYESTVSQKLWDSGAVMLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSN S +GPV +PW+ + D TPGGSSGGSSAAVAG LCA ++G+DTG Sbjct: 122 LNMDEFAMGSSNTYSCFGPVKNPWKGTEGKD-LTPGGSSGGSSAAVAGLLCAGALGSDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPA+ G VG KPTYGRCSR G+I++A SLDQAG++ RTV D+A++L AI GYD+ Sbjct: 181 GSVRQPAALCGVVGAKPTYGRCSRWGMIAYASSLDQAGVLARTVEDAAVMLNAICGYDQK 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T VPD+ + + ++G+ +GIPKEY L I W Q I L D GA+IVE Sbjct: 241 DSTSSQEAVPDFLGGISRDVRGVRIGIPKEYELPKNRGDIAAMWDQNIKHLLDCGAEIVE 300 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ISLPHT YALP YYI++ +EASSNLARYDG+RYG RVEG+ I EMYE TRSI FG+EVK Sbjct: 301 ISLPHTTYALPVYYILASSEASSNLARYDGIRYGTRVEGETIDEMYELTRSINFGEEVKR 360 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R++IG Y LSS ++Y +A+++R L+ RDF EAF++ VD IL TTP A G EE Sbjct: 361 RMLIGAYTLSSGYRRAYYDKAQRVRCLVIRDFEEAFKK-VDCILALTTPVEA--TGIEEP 417 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S +M + DVFTV ++AGLPAISVPA L E+K+P+ LQ+IG E + ++ +I Sbjct: 418 LS-AMDRYFTDVFTVPASLAGLPAISVPAGLSERKLPMALQVIGNYHDECGMLNLAAVIY 476 Query: 482 KEAGYFRPH 490 + +G H Sbjct: 477 EHSGGVLQH 485 >gi|329113630|ref|ZP_08242408.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum DM001] gi|326697037|gb|EGE48700.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum DM001] Length = 495 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 260/485 (53%), Positives = 350/485 (72%), Gaps = 5/485 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK-ARAAAEESDKR 62 L + ++++R+ L ++ SA EL + + AI N +NAYI V+ ++ AAA+ +D R Sbjct: 2 LTGLTLTQAREGLAARKFSARELAKAQLDAIARLNPVLNAYITVLPEETVLAAADAADAR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G A ++G+PIG+KD F TKG+ T A S +L+ F P YESTVT L GAV LGK Sbjct: 62 YAAGTAGLMDGLPIGVKDLFCTKGVRTTAASKMLENFVPPYESTVTANLLKAGAVFLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGS+N TS +GPV SPW R D + PGGSSGGSSAAVA L A+ GTDTG Sbjct: 122 NLDEFAMGSANITSAFGPVASPWKRKDDPSAILVPGGSSGGSSAAVAAGLGLAATGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA++ G VG+KPTYGRCSR G I+FA SLDQAG +TR+V D+ ++L+A+AG+DE Sbjct: 182 GSIRQPAAYCGIVGLKPTYGRCSRWGTIAFASSLDQAGPMTRSVADAGLMLEAMAGFDEK 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+TC N PVP + +A+ +S++G+ VGIP EYR L + W++GI+WLK+AG +IV+ Sbjct: 242 DSTCSNRPVPAFSKAVGKSVKGLRVGIPTEYRSPNLPAEVVAMWEKGIAWLKEAGCEIVD 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLPHT+Y L YYII+PAE SSNLARYDG+R+G+R + + +YE TR+ GFG EV+ Sbjct: 302 VSLPHTKYGLTTYYIIAPAECSSNLARYDGIRFGIRKDAPTLDGVYEATRAAGFGAEVRS 361 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS+ YD++YL+A+K+RTLIKRDF +AFE VDV+LTPT P++AF G EN Sbjct: 362 RILMGTYVLSAGYYDAYYLKAQKVRTLIKRDFEQAFEN-VDVLLTPTAPSAAFAQG--EN 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + ND+FTV +MAG+PA+SVP L +PLGLQ+IG+ F EET+ S+G +E Sbjct: 419 MDDPVQMYLNDIFTVPASMAGVPALSVPVGLNGNGLPLGLQVIGKHFDEETVLSIGGALE 478 Query: 482 KEAGY 486 AG+ Sbjct: 479 AAAGF 483 >gi|56416849|ref|YP_153923.1| glutamyl-tRNA amidotransferase chain A [Anaplasma marginale str. St. Maries] gi|222475214|ref|YP_002563630.1| glutamyl-tRNA amidotransferase chain A (gatA) [Anaplasma marginale str. Florida] gi|254995039|ref|ZP_05277229.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaplasma marginale str. Mississippi] gi|255003191|ref|ZP_05278155.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaplasma marginale str. Puerto Rico] gi|255004321|ref|ZP_05279122.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaplasma marginale str. Virginia] gi|81599146|sp|Q5PAL2|GATA_ANAMM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790375|sp|B9KIR2|GATA_ANAMF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56388081|gb|AAV86668.1| glutamyl-tRNA amidotransferase chain A [Anaplasma marginale str. St. Maries] gi|222419351|gb|ACM49374.1| glutamyl-tRNA amidotransferase chain A (gatA) [Anaplasma marginale str. Florida] Length = 489 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/489 (53%), Positives = 344/489 (70%), Gaps = 8/489 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +++ E+ L++KD SA EL ++YI A+E +NA++ + A AAA+ +D Sbjct: 4 ELLKLSILEAHRCLKNKDFSARELTEAYIGAVEQDT--LNAFVTTTPELALAAADRTDGL 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ + GIP+G+KD F TKG+ T ACS+IL F P YESTV+QKLWD+GAVMLGK Sbjct: 62 LQRGEPIHPMSGIPVGVKDLFCTKGVRTTACSNILKNFVPTYESTVSQKLWDSGAVMLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSN S +GPV +PW+ + D TPGGSSGGSSAAVAG LCA ++G+DTG Sbjct: 122 LNMDEFAMGSSNTYSCFGPVKNPWKGTEGKD-LTPGGSSGGSSAAVAGLLCAGALGSDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPA+ G VG KPTYGRCSR G+I++A SLDQAG++ RTV D+A++L AI GYD+ Sbjct: 181 GSVRQPAALCGVVGAKPTYGRCSRWGMIAYASSLDQAGVLARTVEDAAVMLNAICGYDQK 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T VPD+ + + ++G+ +GIPKEY L I W Q I L D GA+IVE Sbjct: 241 DSTSSQEAVPDFLGGISRDVRGVRIGIPKEYELPKNRGDIAAMWDQNIKHLLDCGAEIVE 300 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ISLPHT YALP YYI++ +EASSNLARYDG+RYG RVEG+ I EMYE TRS+ FG+EVK Sbjct: 301 ISLPHTTYALPVYYILASSEASSNLARYDGIRYGTRVEGETIDEMYELTRSLNFGEEVKR 360 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R++IG Y LSS ++Y +A+++R L+ RDF EAF++ VD IL TTP A G EE Sbjct: 361 RMLIGAYTLSSGYRRAYYDKAQRVRCLVIRDFEEAFKK-VDCILALTTPVEA--TGIEEP 417 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S +M + DVFTV ++AGLPAISVPA L E+K+P+ LQ+IG E + ++ +I Sbjct: 418 LS-AMDRYFTDVFTVPASLAGLPAISVPAGLSERKLPMALQVIGNYHDECGMLNLAAVIY 476 Query: 482 KEAGYFRPH 490 + +G H Sbjct: 477 EHSGGVLQH 485 >gi|225630068|ref|YP_002726859.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia sp. wRi] gi|254790412|sp|C0R5M6|GATA_WOLWR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225592049|gb|ACN95068.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia sp. wRi] Length = 489 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 257/493 (52%), Positives = 346/493 (70%), Gaps = 10/493 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAE 57 M+EL +++++ D L+ K SAVELV+++I A+EN ++NA+I +A KA AA+ Sbjct: 1 MNELRKLSITQMHDGLKKKSFSAVELVEAHISAVENE--KLNAFITKTPEIAMKAAKAAD 58 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 E R + L G+P+GIKD F TKGI T ACS +L+ F P YESTV+ L +GA Sbjct: 59 EHFSRQKDDLISPLMGVPVGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLKSGAA 118 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 MLGKLNMDEFAMGS+N SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G Sbjct: 119 MLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALG 178 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+RQPA++ G VGIKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+AI G Sbjct: 179 SDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 YD D+ PVP ++ ++G +GIPKEYR+D +S I W++ S+LK+ GA Sbjct: 239 YDTKDSISSEKPVPKLSSFINGDVKGKCIGIPKEYRMDGISEEIVHNWERVASYLKENGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++V+I+LPHT+YA+P YY+I AE SSNLARYDGVRYGLRV+ + EMY TR+ GFG+ Sbjct: 299 EVVDITLPHTKYAIPVYYLICSAETSSNLARYDGVRYGLRVDADTLEEMYSLTRAEGFGK 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IG Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L Sbjct: 359 EVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLN 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + + NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + +V Sbjct: 418 EKPD---PLIMCINDVFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGILNVA 474 Query: 478 QIIEKEAG-YFRP 489 +IE+ G RP Sbjct: 475 SVIEQNCGRIIRP 487 >gi|58698369|ref|ZP_00373283.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58535123|gb|EAL59208.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 490 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 257/493 (52%), Positives = 346/493 (70%), Gaps = 10/493 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAE 57 M+EL +++++ D L+ K SAVELV+++I A+EN ++NA+I +A KA AA+ Sbjct: 2 MNELRKLSITQMHDGLKKKSFSAVELVEAHISAVENE--KLNAFITKTPEIAMKAAKAAD 59 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 E R + L G+P+GIKD F TKGI T ACS +L+ F P YESTV+ L +GA Sbjct: 60 EHFSRQKDDLISPLMGVPVGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLKSGAA 119 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 MLGKLNMDEFAMGS+N SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G Sbjct: 120 MLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALG 179 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+RQPA++ G VGIKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+AI G Sbjct: 180 SDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICG 239 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 YD D+ PVP ++ ++G +GIPKEYR+D +S I W++ S+LK+ GA Sbjct: 240 YDTKDSISSEKPVPKLSSFINGDVKGKCIGIPKEYRMDGISEEIVHNWERVASYLKENGA 299 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++V+I+LPHT+YA+P YY+I AE SSNLARYDGVRYGLRV+ + EMY TR+ GFG+ Sbjct: 300 EVVDITLPHTKYAIPVYYLICSAETSSNLARYDGVRYGLRVDADTLEEMYSLTRAEGFGK 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IG Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L Sbjct: 360 EVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLN 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + + NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + +V Sbjct: 419 EKPD---PLIMCINDVFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGILNVA 475 Query: 478 QIIEKEAG-YFRP 489 +IE+ G RP Sbjct: 476 SVIEQNCGRIIRP 488 >gi|42520372|ref|NP_966287.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652619|sp|Q73HP2|GATA_WOLPM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|42410110|gb|AAS14221.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 489 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 255/493 (51%), Positives = 346/493 (70%), Gaps = 10/493 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAE 57 M+EL +++++ D L+ K SAVELV+++I A+EN ++NA+I +A KA AA+ Sbjct: 1 MNELRKLSITQMHDGLKKKSFSAVELVEAHISAVENE--KLNAFITKTPEIAMKAAKAAD 58 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 E R + L G+P+GIKD F TKGI T ACS +L+ F P YESTV+ L +GA Sbjct: 59 EHFSRQKDDLISPLMGVPVGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLKSGAA 118 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 MLGKLNMDEFAMGS+N SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G Sbjct: 119 MLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALG 178 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+RQPA++ G VGIKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+AI G Sbjct: 179 SDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 YD D+ PVP + ++ ++G +GIPKEYR+D +S I W++ S+LK+ GA Sbjct: 239 YDTKDSISSEKPVPKFSSFINGDVKGKRIGIPKEYRMDGISEEIVHNWEKVASYLKENGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++V+++LPHT+YA+P YY+I AE SSNLARYDGVRYG RV+ + EMY TR+ GFG+ Sbjct: 299 EVVDVTLPHTKYAIPVYYLICSAETSSNLARYDGVRYGFRVDADTLEEMYSLTRAEGFGK 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IG Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L Sbjct: 359 EVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLN 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + + NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + +V Sbjct: 418 EKPD---PLIMCINDVFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGILNVA 474 Query: 478 QIIEKEAG-YFRP 489 +IE+ G RP Sbjct: 475 SVIEQNCGRIIRP 487 >gi|162148750|ref|YP_001603211.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] gi|161787327|emb|CAP56921.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] Length = 494 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 258/473 (54%), Positives = 338/473 (71%), Gaps = 5/473 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++ +RD L ++ SAVELV +++ AIE N ++NA+I V A +A AA +D + Sbjct: 2 LTELTIAAARDGLGRREFSAVELVGAHVAAIEKLNGRLNAFITVTAPQALDAARRADAIL 61 Query: 64 INGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 GDA L GIP+GIKD F T G+ T A S +L+ F P YESTVT L +GAV +GK Sbjct: 62 AGGDAPAPLTGIPLGIKDLFCTDGVRTTAASRMLEDFVPPYESTVTANLLRDGAVFVGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGS+N S +G V +PW+ TD PGGSSGGS+AAVA L + GTDTG Sbjct: 122 NLDEFAMGSANINSAFGAVENPWKRAGDTDTVLVPGGSSGGSAAAVAAGLAMGATGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS+ G GIKPTYGRCSR G I+FA SLDQAG + RTV D AILL+++AG+D Sbjct: 182 GSIRQPASYCGIAGIKPTYGRCSRWGTIAFASSLDQAGPMARTVEDCAILLQSMAGFDPR 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V++ VPDY A +S++GM VGIP EYR+ + I+ W+QGI+WL+DAG +IVE Sbjct: 242 DSTSVDIAVPDYRAACGRSLKGMKVGIPAEYRVAGMPAEIEAAWEQGIAWLRDAGCEIVE 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP+T+Y L YYI++PAE SSNLARYDGVR+G RV + E+YE TR GFG EV+ Sbjct: 302 VSLPYTKYGLATYYIVAPAECSSNLARYDGVRFGRRVPAASLDELYEATRREGFGAEVRR 361 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS+ YD++YLRA+K+R LI+RDF +AF VDV+LTPT P+ AF G++ + Sbjct: 362 RILMGTYVLSAGYYDAYYLRAQKVRNLIRRDFEQAFRT-VDVLLTPTAPSPAFAQGEKMD 420 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + M NDVFTV +MAG+PA+SVPA L +PLGLQ+IG+ F EE++ Sbjct: 421 DPVQM--YLNDVFTVPASMAGVPAMSVPAGLSTTGLPLGLQVIGRSFDEESVL 471 >gi|209545484|ref|YP_002277713.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] gi|209533161|gb|ACI53098.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 494 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 258/473 (54%), Positives = 339/473 (71%), Gaps = 5/473 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++ +RD L ++ SAVELV +++ AIE N ++NA+I V A +A AA +D + Sbjct: 2 LTELTIAAARDGLGRREFSAVELVGAHVAAIEKLNGRLNAFITVTAPQALDAARRADAIL 61 Query: 64 INGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 GDA L GIP+GIKD F T G+ T A S +L+ F P YESTVT L +GAV +GK Sbjct: 62 AGGDAPAPLTGIPLGIKDLFCTDGVRTTAASRMLEDFVPPYESTVTANLLRDGAVFVGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGS+N S +G V +PW R+ D+ PGGSSGGS+AAVA L + GTDTG Sbjct: 122 NLDEFAMGSANINSAFGAVENPWKRAGDADTVLVPGGSSGGSAAAVAAGLAMGATGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS+ G GIKPTYGRCSR G I+FA SLDQAG + RTV D AILL+++AG+D Sbjct: 182 GSIRQPASYCGIAGIKPTYGRCSRWGTIAFASSLDQAGPMARTVEDCAILLQSMAGFDPR 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V++ VPDY A +S++GM VGIP EYR+ + I+ W+QGI+WL+DAG +IVE Sbjct: 242 DSTSVDIAVPDYRAACGRSLKGMKVGIPAEYRVAGMPAEIEAAWEQGIAWLRDAGCEIVE 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP+T+Y L YYI++PAE SSNLARYDGVR+G RV + E+YE TR GFG EV+ Sbjct: 302 VSLPYTKYGLATYYIVAPAECSSNLARYDGVRFGRRVPAASLDELYEATRREGFGAEVRR 361 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS+ YD++YLRA+K+R LI+RDF +AF VDV+LTPT P+ AF G++ + Sbjct: 362 RILMGTYVLSAGYYDAYYLRAQKVRNLIRRDFEQAFRT-VDVLLTPTAPSPAFAQGEKMD 420 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + M NDVFTV +MAG+PA+SVPA L +PLGLQ+IG+ F EE++ Sbjct: 421 DPVQM--YLNDVFTVPASMAGVPAMSVPAGLSTTGLPLGLQVIGRSFDEESVL 471 >gi|190571486|ref|YP_001975844.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018888|ref|ZP_03334696.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|229464485|sp|B3CMT8|GATA_WOLPP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|190357758|emb|CAQ55210.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995839|gb|EEB56479.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 488 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 252/487 (51%), Positives = 342/487 (70%), Gaps = 8/487 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + ++E D LR ++ SAVELV+++I A+EN Q+NA+I + A AA+ +D Sbjct: 1 MNELRRLTITEMHDGLRRRNFSAVELVETHINAVENE--QLNAFITKTPEIAIKAAKIAD 58 Query: 61 KRIIN--GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + D L GIP+G+KD F TKGI T ACS +L+ F P YESTV+ L +GA + Sbjct: 59 EHFLKQKDDIPPLMGIPVGVKDLFCTKGIKTTACSKMLENFIPTYESTVSNLLLKSGAAV 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGS+N SY+GPV + W K PGGSSGGS+A+VAGFLCA ++G+ Sbjct: 119 LGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGAKVVPGGSSGGSAASVAGFLCAGALGS 178 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA++ G VGIKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+ I GY Sbjct: 179 DTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEIICGY 238 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DE D+T VP + ++ I+G +GIPKEY++D +S I W++ S LK+ GA+ Sbjct: 239 DEKDSTSSKRTVPKFSSFINGDIKGKRIGIPKEYKMDGISDEIVHNWEKVSSNLKENGAE 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +V+I+LPHT+YA+P YY+I AE SSNLARYDGVRYG RV+ + EMY TR+ GFG+E Sbjct: 299 VVDITLPHTKYAIPVYYLICSAETSSNLARYDGVRYGFRVDADTLEEMYSLTRAEGFGKE 358 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI+IG+Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L + Sbjct: 359 VKRRILIGSYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLNE 417 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + + NDVFTV ++AGLPAISVP L +PL LQ+IG + E + ++ Sbjct: 418 KPD---PLIMCINDVFTVPASLAGLPAISVPVGLSNAGLPLALQVIGNYYDEAGILNMAS 474 Query: 479 IIEKEAG 485 +IE+ G Sbjct: 475 VIEQNCG 481 >gi|57239095|ref|YP_180231.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ehrlichia ruminantium str. Welgevonden] gi|81637909|sp|Q5HBG3|GATA_EHRRW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|57161174|emb|CAH58088.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ehrlichia ruminantium str. Welgevonden] Length = 487 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 257/492 (52%), Positives = 342/492 (69%), Gaps = 16/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++++E + L K+ SAVEL ++I AI +N Q+NA+I + A AA ++D Sbjct: 1 MKDILKLSIAEMHENLIKKEFSAVELTQTHIDAI--NNEQLNAFITKTPEVALDAARKAD 58 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +I+ + L GIP+GIKD F TK I T ACS+IL F P Y+STV ++L D+GAVM Sbjct: 59 HILIHEQDKITPLTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTVVKRLIDDGAVM 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +GPV +PW D K PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 119 LGKLNMDEFAMGSSNSNSCFGPVENPWTRADGV-KVVPGGSSGGSSAAVAGFLCAGALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYGRCSRLG+I+FA SLDQAG++TRTV+D+A++L+ I GY Sbjct: 178 DTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVKDAALMLQPICGY 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQGISWLK 293 D D+T N+ P + ++ I+G +GIPKEY L +Y + + W +GI +L+ Sbjct: 238 DTQDSTSANITTPRFLDSITNIIKGKRIGIPKEYELSDKYKEY--EEVSEMWLKGIKYLE 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + GA+IV ISLPHT YALP YYII AEASSNLARYDG++YG RV +I EMYE TR Sbjct: 296 NEGAEIVNISLPHTSYALPVYYIICSAEASSNLARYDGIKYGTRVNSDNINEMYELTRGN 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G EVK RI+IG Y LSS YD++Y +A+ IR L+ DF E+F + VD ILTPT P A Sbjct: 356 NLGTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFVESF-KSVDYILTPTAPKEA 414 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F + ++ + ++ NDVFTV ++AGLPAIS+P L + K+PL LQ+IG + E + Sbjct: 415 FAMDEQLD---TLTMYLNDVFTVPASLAGLPAISIPIGLSKNKLPLSLQIIGNYYDEGGI 471 Query: 474 FSVGQIIEKEAG 485 ++ +IEK G Sbjct: 472 LNIASVIEKHTG 483 >gi|58579042|ref|YP_197254.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ehrlichia ruminantium str. Welgevonden] gi|58417668|emb|CAI26872.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ehrlichia ruminantium str. Welgevonden] Length = 500 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 257/492 (52%), Positives = 342/492 (69%), Gaps = 16/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++++E + L K+ SAVEL ++I AI +N Q+NA+I + A AA ++D Sbjct: 14 MKDILKLSIAEMHENLIKKEFSAVELTQTHIDAI--NNEQLNAFITKTPEVALDAARKAD 71 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +I+ + L GIP+GIKD F TK I T ACS+IL F P Y+STV ++L D+GAVM Sbjct: 72 HILIHEQDKITPLTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTVVKRLIDDGAVM 131 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +GPV +PW D K PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 132 LGKLNMDEFAMGSSNSNSCFGPVENPWTRADGV-KVVPGGSSGGSSAAVAGFLCAGALGS 190 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYGRCSRLG+I+FA SLDQAG++TRTV+D+A++L+ I GY Sbjct: 191 DTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVKDAALMLQPICGY 250 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQGISWLK 293 D D+T N+ P + ++ I+G +GIPKEY L +Y + + W +GI +L+ Sbjct: 251 DTQDSTSANITTPRFLDSITNIIKGKRIGIPKEYELSDKYKEY--EEVSEMWLKGIKYLE 308 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + GA+IV ISLPHT YALP YYII AEASSNLARYDG++YG RV +I EMYE TR Sbjct: 309 NEGAEIVNISLPHTSYALPVYYIICSAEASSNLARYDGIKYGTRVNSDNINEMYELTRGN 368 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G EVK RI+IG Y LSS YD++Y +A+ IR L+ DF E+F + VD ILTPT P A Sbjct: 369 NLGTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFVESF-KSVDYILTPTAPKEA 427 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F + ++ + ++ NDVFTV ++AGLPAIS+P L + K+PL LQ+IG + E + Sbjct: 428 FAMDEQLD---TLTMYLNDVFTVPASLAGLPAISIPIGLSKNKLPLSLQIIGNYYDEGGI 484 Query: 474 FSVGQIIEKEAG 485 ++ +IEK G Sbjct: 485 LNIASVIEKHTG 496 >gi|58696769|ref|ZP_00372306.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58537043|gb|EAL60179.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Drosophila simulans] Length = 478 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 254/481 (52%), Positives = 337/481 (70%), Gaps = 10/481 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRIINGDAR 69 D L+ K SAVELV+++I A+EN ++NA+I +A KA AA+E R + Sbjct: 2 HDGLKKKSFSAVELVEAHISAVENE--KLNAFITKTPEIAMKAAKAADEHFSRQKDDLIS 59 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+GIKD F TKGI T ACS +L+ F P YESTV+ L +GA MLGKLNMDEFAM Sbjct: 60 PLMGVPVGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLKSGAAMLGKLNMDEFAM 119 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+N SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G+DTGGS+RQPA+ Sbjct: 120 GSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAA 179 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 + G VGIKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+AI GYD D+ P Sbjct: 180 YCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICGYDTKDSISSEKP 239 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VP ++ ++G +GIPKEYR+D +S I W++ S+LK+ GA++V+I+LPHT+Y Sbjct: 240 VPKLSSFINGDVKGKCIGIPKEYRMDGISEEIVHNWERVASYLKENGAEVVDITLPHTKY 299 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A+P YY+I AE SSNLARYDGVRYGLRV+ + EMY TR+ GFG+EVK RI+IG Y Sbjct: 300 AIPVYYLICSAETSSNLARYDGVRYGLRVDADTLEEMYSLTRAEGFGKEVKRRILIGAYA 359 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L ++ + + Sbjct: 360 LSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLNEKPD---PLIMC 415 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG-YFR 488 NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + +V +IE+ G R Sbjct: 416 INDVFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGILNVASVIEQNCGRIIR 475 Query: 489 P 489 P Sbjct: 476 P 476 >gi|58617100|ref|YP_196299.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ehrlichia ruminantium str. Gardel] gi|58416712|emb|CAI27825.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ehrlichia ruminantium str. Gardel] Length = 500 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 255/492 (51%), Positives = 340/492 (69%), Gaps = 16/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++++E + L K+ SAVEL ++I AI +N Q+NA+I + A AA ++D Sbjct: 14 MKDILKLSIAEMHENLIKKEFSAVELTQAHIDAI--NNEQLNAFITKTPEVALNAARKAD 71 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + + L GIP+GIKD F TK I T ACS+IL F P Y+STV ++L D+GAVM Sbjct: 72 HILTHEQDKITSLTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTVVKRLIDDGAVM 131 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +GPV +PW D K PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 132 LGKLNMDEFAMGSSNSNSCFGPVENPWTRADGV-KVVPGGSSGGSSAAVAGFLCAGALGS 190 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYGRCSR G+I+FA SLDQAG++TRTV+D+A++L+ I GY Sbjct: 191 DTGGSVRQPAAFCGIVGLKPTYGRCSRSGMIAFASSLDQAGVLTRTVKDAALMLQPICGY 250 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQGISWLK 293 D D+T N+ P + ++ I+G +GIPKEY L +Y + + W +GI +L+ Sbjct: 251 DTQDSTSANITTPRFLDSITNIIKGKRIGIPKEYELSNKYKEY--EEVSEMWLKGIKYLE 308 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + GA+IV ISLPHT YALP YYII AEASSNLARYDG++YG RV +I EMYE TR Sbjct: 309 NEGAEIVNISLPHTSYALPVYYIICSAEASSNLARYDGIKYGTRVNSDNINEMYELTRGN 368 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G EVK RI+IG Y LSS YD++Y +A+ IR L+ DF E+F + VD ILTPT P A Sbjct: 369 NLGTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFVESF-KSVDYILTPTAPKEA 427 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F + ++ + ++ NDVFTV ++AGLPAIS+P L + K+PL LQ+IG + E + Sbjct: 428 FAMDEQLD---TLTMYLNDVFTVPASLAGLPAISIPIGLSKNKLPLSLQIIGNYYDEGGI 484 Query: 474 FSVGQIIEKEAG 485 ++ +IEK G Sbjct: 485 LNIASVIEKYTG 496 >gi|109829727|sp|Q5FHN7|GATA_EHRRG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 487 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 255/492 (51%), Positives = 340/492 (69%), Gaps = 16/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++++E + L K+ SAVEL ++I AI +N Q+NA+I + A AA ++D Sbjct: 1 MKDILKLSIAEMHENLIKKEFSAVELTQAHIDAI--NNEQLNAFITKTPEVALNAARKAD 58 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + + L GIP+GIKD F TK I T ACS+IL F P Y+STV ++L D+GAVM Sbjct: 59 HILTHEQDKITSLTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTVVKRLIDDGAVM 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLNMDEFAMGSSN S +GPV +PW D K PGGSSGGSSAAVAGFLCA ++G+ Sbjct: 119 LGKLNMDEFAMGSSNSNSCFGPVENPWTRADGV-KVVPGGSSGGSSAAVAGFLCAGALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYGRCSR G+I+FA SLDQAG++TRTV+D+A++L+ I GY Sbjct: 178 DTGGSVRQPAAFCGIVGLKPTYGRCSRSGMIAFASSLDQAGVLTRTVKDAALMLQPICGY 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQGISWLK 293 D D+T N+ P + ++ I+G +GIPKEY L +Y + + W +GI +L+ Sbjct: 238 DTQDSTSANITTPRFLDSITNIIKGKRIGIPKEYELSNKYKEY--EEVSEMWLKGIKYLE 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + GA+IV ISLPHT YALP YYII AEASSNLARYDG++YG RV +I EMYE TR Sbjct: 296 NEGAEIVNISLPHTSYALPVYYIICSAEASSNLARYDGIKYGTRVNSDNINEMYELTRGN 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G EVK RI+IG Y LSS YD++Y +A+ IR L+ DF E+F + VD ILTPT P A Sbjct: 356 NLGTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFVESF-KSVDYILTPTAPKEA 414 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F + ++ + ++ NDVFTV ++AGLPAIS+P L + K+PL LQ+IG + E + Sbjct: 415 FAMDEQLD---TLTMYLNDVFTVPASLAGLPAISIPIGLSKNKLPLSLQIIGNYYDEGGI 471 Query: 474 FSVGQIIEKEAG 485 ++ +IEK G Sbjct: 472 LNIASVIEKYTG 483 >gi|109892001|sp|Q5GRM3|GATA_WOLTR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 489 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 249/485 (51%), Positives = 341/485 (70%), Gaps = 9/485 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL +++++ + L+ + SAVEL++ +I A+EN ++NA+I + A AA+ +D Sbjct: 1 MNELRKLSIAQMHNGLKQRSFSAVELIEVHINAVENE--KLNAFITKTPEIAIKAAKTAD 58 Query: 61 KRI---INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 +R + L GIP+G+KD F TKG+ T ACS +L+ F P YESTV+ L +GA Sbjct: 59 ERFSQQKDSTISPLMGIPVGVKDLFCTKGVKTTACSKMLENFIPTYESTVSDLLLKSGAA 118 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 MLGKLNMDEFAMGS+N SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G Sbjct: 119 MLGKLNMDEFAMGSANINSYFGPVENVWVRKSDGEKVVPGGSSGGSAASVAGFLCAGALG 178 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+RQPA++ G VG KPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+ I G Sbjct: 179 SDTGGSVRQPAAYCGVVGAKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLETICG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 YD D+T PVP + ++ I+G +GIPKEYR+D +S I W++ S LK+ GA Sbjct: 239 YDNKDSTSSERPVPRFSNFINGDIKGRRIGIPKEYRMDGISEEIIYHWEKVSSDLKENGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++V+I+LPHT+YA+P YY+I AEASSNLARYDGVRYGLRV + EMY TR+ GFG+ Sbjct: 299 EVVDITLPHTKYAIPVYYLICSAEASSNLARYDGVRYGLRVNADILEEMYSLTRAEGFGK 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IG Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L Sbjct: 359 EVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLN 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + + NDVFTV ++AGLPAISVP L + +PL LQ+IG + E + +V Sbjct: 418 EKPD---PLIMCINDVFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGMLNVA 474 Query: 478 QIIEK 482 +IE+ Sbjct: 475 SVIEQ 479 >gi|77919762|ref|YP_357577.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pelobacter carbinolicus DSM 2380] gi|109891965|sp|Q3A2K0|GATA_PELCD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|77545845|gb|ABA89407.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pelobacter carbinolicus DSM 2380] Length = 485 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 242/486 (49%), Positives = 331/486 (68%), Gaps = 9/486 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + + E + L++++IS+ EL +++ I +++ ++ A+I + A AE +D R+ Sbjct: 3 LTDLTIHELQALLKNREISSRELTQAFLTRIADTDQRIGAFITQSEEAALKNAEAADARL 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A L GIP+ +KD F T+G+ T S ILD F P Y T +KL + AV+LGKLN Sbjct: 63 AAGNAASLTGIPLALKDIFITEGMRTTCASRILDNFVPPYSGTAVRKLQEQDAVILGKLN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW PGGSSGGS+A VA A++GTDTGGS Sbjct: 123 MDEFAMGSSNENSAFGTVKNPW-----NQDCVPGGSSGGSAACVAARQAVATLGTDTGGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPAS G VG+KPTYGR SR G+I++A SLDQ G +TR V D A++L A+AGYD D+ Sbjct: 178 IRQPASHCGVVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVEDCALMLGAVAGYDPADS 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T +N PVPDY+ AL Q IQG+ +G+PKEY ++ L I +T + I+ L+ GA+ VE+S Sbjct: 238 TSINTPVPDYQAALKQGIQGLKIGLPKEYFIEGLDTDIRQTIDKAIATLRKLGAEPVEVS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPHT+YA+ YY+I+ AEASSNLARYDGVRYG RV +G+ +++MY +R+ GFG EVK R Sbjct: 298 LPHTEYAVACYYLIATAEASSNLARYDGVRYGERVDQGRGLIDMYMQSRAAGFGPEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LSS YD++YL+A+K+RTLI++DF +AF Q VDVILTP PT AF +G E Sbjct: 358 IMLGTYALSSGYYDAYYLKAQKVRTLIRQDFLDAFNQ-VDVILTPVAPTPAFRMG--EKT 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + +D+FT+ VN+AG +SVP +P+GLQLIG+PF EET+ E+ Sbjct: 415 ADPLQMYLSDIFTIPVNLAGTCGMSVPCGFSHDGLPIGLQLIGRPFGEETILRTAYAYEQ 474 Query: 483 EAGYFR 488 + R Sbjct: 475 ATDWHR 480 >gi|189183274|ref|YP_001937059.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Orientia tsutsugamushi str. Ikeda] gi|229485994|sp|B3CQQ9|GATA_ORITI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189180045|dbj|BAG39825.1| glutamyl-tRNA amidotransferase subunit A [Orientia tsutsugamushi str. Ikeda] Length = 492 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 251/485 (51%), Positives = 343/485 (70%), Gaps = 7/485 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + +S++ L++K+ +A +LV ++I ++ +NAYI + + A AA++SD Sbjct: 1 MNNLVKLTISQAISGLKNKEFTATDLVTAHINQMDKYRC-INAYITEIPELALQAAKKSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I AR +EGIP+ IKD F TKGI T A S +L F P Y++TV K+ + G +MLG Sbjct: 60 FLIQTNQARPIEGIPVSIKDLFCTKGILTTAASKMLQNFTPVYDATVYSKIINAGGIMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N SY+G VI+PW++ + TPGGSSGGSSAAVA F+ A++G+DT Sbjct: 120 KGNMDEFAMGSANINSYFGNVINPWKAENDDIDLTPGGSSGGSSAAVAAFMAMAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPAS+TGTVGIKP+YGRCSR G+I+F+ SLDQAGIITRTV D+AI+L+ + GYDE Sbjct: 180 GGSVRQPASYTGTVGIKPSYGRCSRWGMIAFSCSLDQAGIITRTVEDAAIMLETMMGYDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKI 299 D+T +N+ VP+ A++Q I+GM +GIP + + LS I WQ I+ LKD G +I Sbjct: 240 KDSTSLNVEVPNLRSAVNQPIKGMKIGIPYDLMENKSLSSEIITMWQNTINLLKDHGVEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK--DILEMYENTRSIGFGQ 357 V ISLP+ YALP YY++S AEASSNLARYDGVRYGLRVEGK +I E+YE +RS GFG Sbjct: 300 VSISLPYINYALPVYYVLSSAEASSNLARYDGVRYGLRVEGKNSNINEIYELSRSEGFGA 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTY L+S +S+Y++A+++R LI DFT +F + VD IL P+ PT+AFPL Sbjct: 360 EVKRRIMMGTYALASTNINSYYIKAQQVRRLIVNDFTNSFNK-VDCILIPSAPTAAFPLN 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++ +M ND+ T+ ++AGLP IS+PA K+PLG+Q+IG E + + Sbjct: 419 SNQDDPVTM--YLNDILTIPASLAGLPCISIPAGFSANKLPLGMQVIGSRLDEYNIIKIS 476 Query: 478 QIIEK 482 IEK Sbjct: 477 SAIEK 481 >gi|111073611|emb|CAL29456.1| Glutamyl-tRNA amidotransferase subunit A [Wolbachia endosymbiont of Onchocerca volvulus] Length = 491 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 251/490 (51%), Positives = 343/490 (70%), Gaps = 13/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++++E RD L KD SAVEL + +I A+E+ ++NA++ + A AA+ +D Sbjct: 1 MNELRKLSITEMRDGLNRKDFSAVELTEVHINAVEDE--KLNAFVTKTPEIAIKAAKAAD 58 Query: 61 KRIINGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 + +D L GIP+G+KD F TKGI T ACS +L+ F P YESTV++ L +G Sbjct: 59 EHF--SKQKDDITPPLMGIPVGVKDLFCTKGIKTTACSKMLENFVPTYESTVSKLLLKSG 116 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 AVMLGKLNMDEFAMGS+N S++GPV + W +K PGGSSGGS++AVAGFLCA + Sbjct: 117 AVMLGKLNMDEFAMGSANTNSWFGPVENVWTRKSDGEKVVPGGSSGGSASAVAGFLCAGA 176 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G+DTGGS+RQPA++ G VGIKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+ I Sbjct: 177 LGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLETI 236 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 GYD D+T VP + + I+G ++GIPKEYR+D +S I W++ S LK++ Sbjct: 237 CGYDNKDSTSSERLVPKFSSLISGDIKGKSIGIPKEYRMDGISEEIVHYWEKVSSNLKES 296 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA+IV+I+LP+T+YA+P YY+I AEASSNLARYDGV YG R + + EMY TR+ GF Sbjct: 297 GAEIVDIALPYTKYAIPVYYLICSAEASSNLARYDGVHYGFRADADTLEEMYSLTRAEGF 356 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+EVK RI+IG Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ VD IL P+ PT AF Sbjct: 357 GKEVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-VDYILVPSAPTEAFG 415 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 L ++ + + NDVFTV ++AGLPAIS+P L + +PL LQ+IG + E + + Sbjct: 416 LNEKPD---PIIMCINDVFTVPASLAGLPAISIPVGLSSEGLPLALQVIGNYYDEAGILN 472 Query: 476 VGQIIEKEAG 485 V +IE+ G Sbjct: 473 VANVIEQNCG 482 >gi|222053489|ref|YP_002535851.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacter sp. FRC-32] gi|254790392|sp|B9LZ18|GATA_GEOSF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|221562778|gb|ACM18750.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacter sp. FRC-32] Length = 485 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 242/487 (49%), Positives = 332/487 (68%), Gaps = 9/487 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E D+L+ K++S+VE +S + IE ++NA+I V A +A A E+DKR Sbjct: 2 ELFELTIHELHDKLKKKEVSSVEATESMLARIEAVEPKVNAFITVTADQALKDAAEADKR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I +GD L GIP+ +KD F TKG+ T S IL+ F P Y++T +L GAV++GKL Sbjct: 62 IADGDMDKLTGIPVALKDIFLTKGVRTTCASRILENFIPPYDATSVARLKARGAVLVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSS E+SY+G +PW + PGGSSGGS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSTESSYFGKTSNPWNL-----ECIPGGSSGGSAAAIAAQQATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+I++A SLDQ G +TR V D AI+L+A+AGYD D Sbjct: 177 SIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLEAVAGYDAKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V+LPVP+Y +AL ++G+ +G+P+EY ++ L P + K + I+ + GA+ E+ Sbjct: 237 STSVDLPVPEYTKALTGQVKGLKIGLPREYFIEGLDPDVQKAMDEAIATYRQMGAEFQEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLPHT YA+ YY+++ AEASSNLARYDG R+G R E + +L+MY +R+ GFG+EVK Sbjct: 297 SLPHTDYAVATYYLVATAEASSNLARYDGARFGHRSHEAQSLLDMYRKSRAEGFGEEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++YL+A+K+RTLI DF +AFEQ VDV+LTP PT AF +G E Sbjct: 357 RIMLGTYALSSGYYDAYYLKAQKVRTLIMHDFIKAFEQ-VDVLLTPVAPTPAFRIG--EK 413 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S + +D+FT+ VN+AG ISVPA L +P+GLQLIG+PF EE + E Sbjct: 414 TSDPLQMYLSDIFTIPVNLAGTCGISVPAGLSRAGLPIGLQLIGKPFGEENILRAAHAFE 473 Query: 482 KEAGYFR 488 + + + Sbjct: 474 QNTDWHK 480 >gi|58585020|ref|YP_198593.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419336|gb|AAW71351.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 478 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 246/470 (52%), Positives = 331/470 (70%), Gaps = 9/470 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII---NGDARDLE 72 L+ + SAVEL++ +I A+EN ++NA+I + A AA+ +D+R + L Sbjct: 5 LKQRSFSAVELIEVHINAVENE--KLNAFITKTPEIAIKAAKTADERFSQQKDSTISPLM 62 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+G+KD F TKG+ T ACS +L+ F P YESTV+ L +GA MLGKLNMDEFAMGS+ Sbjct: 63 GIPVGVKDLFCTKGVKTTACSKMLENFIPTYESTVSDLLLKSGAAMLGKLNMDEFAMGSA 122 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G+DTGGS+RQPA++ G Sbjct: 123 NINSYFGPVENVWVRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCG 182 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+ I GYD D+T PVP Sbjct: 183 VVGAKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLETICGYDNKDSTSSERPVPR 242 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++ I+G +GIPKEYR+D +S I W++ S LK+ GA++V+I+LPHT+YA+P Sbjct: 243 FSNFINGDIKGRRIGIPKEYRMDGISEEIIYHWEKVSSDLKENGAEVVDITLPHTKYAIP 302 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I AEASSNLARYDGVRYGLRV + EMY TR+ GFG+EVK RI+IG Y LSS Sbjct: 303 VYYLICSAEASSNLARYDGVRYGLRVNADILEEMYSLTRAEGFGKEVKRRILIGAYALSS 362 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 Y+ +Y +A+ IR LI+ DF +AFE+ +D IL P+ PT AF L ++ + + ND Sbjct: 363 GHYNEYYEKAQCIRALIRNDFIKAFEK-IDYILVPSAPTEAFGLNEKPD---PLIMCIND 418 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 VFTV ++AGLPAISVP L + +PL LQ+IG + E + +V +IE+ Sbjct: 419 VFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGMLNVASVIEQ 468 >gi|148284746|ref|YP_001248836.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Orientia tsutsugamushi str. Boryong] gi|166217693|sp|A5CEC8|GATA_ORITB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146740185|emb|CAM80433.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Orientia tsutsugamushi str. Boryong] Length = 492 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 248/485 (51%), Positives = 339/485 (69%), Gaps = 7/485 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + +S++ L++K+ +A +LV ++I ++ +N+YI + + A AA++SD Sbjct: 1 MNNLVKLTISQAVSGLKNKEFTATDLVTAHINQMDKYR-YINSYITEIPELALQAAKKSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I N AR +EGIP+ IKD F TKGI T A S +L F P Y++T K+ + G +MLG Sbjct: 60 FLIQNNQARPIEGIPVSIKDLFCTKGILTTAASKMLQNFTPVYDATAYSKIINAGGIMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+N SY+G VI+PW++ TPGGSSGGSSAAVA F+ A++G+DT Sbjct: 120 KGNMDEFAMGSANINSYFGNVINPWKAESDDVDLTPGGSSGGSSAAVAAFMAMAALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPAS+TGTVGIKP+YGRCSR G+I+F+ SLDQ G+ITRTV D+AI+L+ + GYDE Sbjct: 180 GGSVRQPASYTGTVGIKPSYGRCSRWGMIAFSCSLDQPGVITRTVEDAAIMLEIMMGYDE 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKI 299 D+T +N VP+ A++Q I+GM +GIP + + LS I WQ I+ LKD G +I Sbjct: 240 KDSTSLNAEVPNLRSAVNQPIKGMKIGIPYDLMENRSLSSEIITMWQNTINLLKDHGVEI 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYENTRSIGFGQ 357 V I LP+ YALP YY++S AEASSNLARYDGVRYGLRVEGKD I E+YE +RS GFG Sbjct: 300 VSIGLPYINYALPVYYVLSSAEASSNLARYDGVRYGLRVEGKDSNINEIYELSRSEGFGA 359 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTY L+S +S+Y++A+++R LI DFT +F + VD IL P+ PT+AFPL Sbjct: 360 EVKRRIMMGTYALASTNINSYYIKAQQVRRLIVNDFTNSFNK-VDCILIPSAPTAAFPLN 418 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++ +M ND+ T+ ++AGLP IS+PA K+PLG+Q+IG E + + Sbjct: 419 SNQDDPVTM--YLNDILTIPASLAGLPCISIPAGFSANKLPLGMQVIGSRLDEYNIIKIS 476 Query: 478 QIIEK 482 IEK Sbjct: 477 SAIEK 481 >gi|197120005|ref|YP_002140432.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacter bemidjiensis Bem] gi|229485882|sp|B5ED19|GATA_GEOBB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|197089365|gb|ACH40636.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Geobacter bemidjiensis Bem] Length = 485 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 240/482 (49%), Positives = 336/482 (69%), Gaps = 9/482 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + + E ++L++K++S+VE + + IE +SQ+NAYI V ++A AE++D+R Sbjct: 2 EIFDLTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAEDADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+G+KD F TKGI T S IL+ F P Y+ T KL + GAV++GKL Sbjct: 62 IAAGEIAPLTGIPVGLKDIFVTKGIRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSSNE+SY+GP +PW TPGGSSGGS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSNESSYFGPCKNPWDL-----SCTPGGSSGGSAAAIAARTATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+I++A SLDQ G +TR V DSA+LL A+AGYD D Sbjct: 177 SIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDSALLLGAVAGYDPMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T VN PVPDY +L + ++G+ +G+PK+Y ++ L P + + + I+ K GA I E+ Sbjct: 237 STSVNTPVPDYVASLAKGVKGIKIGLPKQYFIEGLDPDVKRAMDEAIAMYKSLGADIREV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKH 361 SLP+T+YA+ YYII+ AEAS+NLARYDGVR+G R E + + +MY +R+ GFG EVK Sbjct: 297 SLPNTEYAVATYYIIATAEASANLARYDGVRFGHRAEDARGLAQMYSKSRAEGFGPEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y++A+K+RTLI++DF AF++ VDV+LTP PT AF + ++ Sbjct: 357 RIMLGTYALSSGYYDAYYVKAQKVRTLIQQDFLNAFKE-VDVLLTPIAPTPAFKIAEKLE 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D+FT+ VN+AG ISVPA +P+GLQL+G+PF E+ + + E Sbjct: 416 DPLQM--YLSDIFTIPVNLAGTCGISVPAGFSAAGLPIGLQLVGKPFGEQEILTAAYSFE 473 Query: 482 KE 483 +E Sbjct: 474 RE 475 >gi|95931418|ref|ZP_01314126.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfuromonas acetoxidans DSM 684] gi|95132536|gb|EAT14227.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfuromonas acetoxidans DSM 684] Length = 485 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 233/481 (48%), Positives = 336/481 (69%), Gaps = 9/481 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + + + + R+ +++VEL ++++Q I++++ ++NA+I V +A AA ++D + Sbjct: 2 QLTDLTIHDMQQRMADGSLTSVELTEAFLQRIKDTDERLNAFITVCDDEALEAARQADAQ 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ + L GIP+ +KD F T+G+ T S IL + P Y+ T +KL + GAV++GKL Sbjct: 62 RAAGNVQPLTGIPVALKDIFITEGLRTTCASKILGDYCPPYDGTAVRKLKEQGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S YGPV +PW ++D PGGSSGGS+ AVA A++GTDTGG Sbjct: 122 NMDEFAMGSSNENSGYGPVRNPW-NLDCV----PGGSSGGSAVAVAARQAVATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PAS G VG+KP+YGR SR G+I++A SLDQ G +TR VRD AI+L A+AGYD D Sbjct: 177 SIRMPASHCGVVGLKPSYGRVSRYGVIAYASSLDQVGPMTRDVRDCAIMLGAVAGYDPAD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V++PVPDY L+Q + G +G+PKEY +D L + + + + GA+IVE+ Sbjct: 237 STSVDMPVPDYLENLEQGVAGKKIGLPKEYFIDGLDAEVKQAIDAAVETYRKLGAEIVEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLPHT+YA+ YY+++ AEASSNLARYDGVR+G RV EG +++MY TRS GFG EVK Sbjct: 297 SLPHTKYAVACYYVVATAEASSNLARYDGVRFGERVDEGNGLIDMYMQTRSQGFGDEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++YL+A+K+R+LI++DF +AFEQ VD ILTP PT+AF LG++ Sbjct: 357 RIMLGTYALSSGYYDAYYLKAQKVRSLIRQDFLDAFEQ-VDCILTPVAPTAAFKLGEKMA 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M +D+FT++ N+AG+ +S+P E+ +P+G+QL+G+PF E L E Sbjct: 416 DPLTM--YLSDIFTISTNLAGICGLSLPCGRTEQGLPIGVQLLGKPFGEAELLQTAYAYE 473 Query: 482 K 482 + Sbjct: 474 Q 474 >gi|253702339|ref|YP_003023528.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacter sp. M21] gi|259647217|sp|C6E6Z2|GATA_GEOSM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|251777189|gb|ACT19770.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacter sp. M21] Length = 485 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 239/482 (49%), Positives = 335/482 (69%), Gaps = 9/482 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + + E ++L++K++S+VE + + IE +SQ+NAYI V ++A A+++D+R Sbjct: 2 EIFDLTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAQDADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L G+P+G+KD F TKGI T S IL+ F P Y+ T KL + GAV++GKL Sbjct: 62 IAAGEIAPLTGVPVGLKDIFVTKGIRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSSNE+SY+GP +PW TPGGSSGGS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSNESSYFGPCRNPWDL-----SCTPGGSSGGSAAAIAARTATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+I++A SLDQ G +TR V DSA+LL A+AGYD D Sbjct: 177 SIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDSALLLGAVAGYDPMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T VN PVPDY L + ++GM +G+PK+Y ++ L P + + + I+ K GA I E+ Sbjct: 237 STSVNTPVPDYVAGLGKGVKGMKIGLPKQYFIEGLDPDVKRAMDEAIALYKSLGADIREV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKH 361 SLP+T+YA+ YYII+ AEAS+NLARYDGVR+G R E + + +MY +R+ GFG EVK Sbjct: 297 SLPNTEYAVATYYIIATAEASANLARYDGVRFGHRAENARGLAQMYSKSRAEGFGPEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y++A+K+RTLI++DF AF++ VDV+LTP PT AF + ++ Sbjct: 357 RIMLGTYALSSGYYDAYYVKAQKVRTLIQQDFLNAFKE-VDVLLTPIAPTPAFKIAEKLE 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D+FT+ VN+AG ISVPA +P+GLQL+G+PF E+ + + E Sbjct: 416 DPLQM--YLSDIFTIPVNLAGTCGISVPAGFSAAGLPIGLQLVGKPFGEQEILTAAYSFE 473 Query: 482 KE 483 +E Sbjct: 474 RE 475 >gi|148266334|ref|YP_001233040.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacter uraniireducens Rf4] gi|189045250|sp|A5G9J9|GATA_GEOUR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146399834|gb|ABQ28467.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Geobacter uraniireducens Rf4] Length = 485 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/481 (50%), Positives = 329/481 (68%), Gaps = 9/481 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E D+L+ K++S+VE + + I+ ++NA+I V ++A AE +D+R Sbjct: 2 ELFELTIHELHDKLKKKEVSSVEATRALLARIDAVEPRVNAFITVTPEEALKNAEAADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I GD + L GIPI +KD F TKG+ T S ILD F P Y++T +L G V++GKL Sbjct: 62 IAAGDMQLLTGIPIALKDIFLTKGVRTTCASRILDNFIPPYDATSVARLKAQGMVLVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSS E+SYYG +PW + PGGSSGGS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSTESSYYGKTHNPWNL-----ECIPGGSSGGSAAAIAARQAIATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+I++A SLDQ G +TR V D AI+L A+AG+D D Sbjct: 177 SIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLGAVAGFDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V+LPVPDY +AL ++G+ +G+PKEY + L P + KT I K GA+ VEI Sbjct: 237 STSVDLPVPDYSKALSNDVKGLKIGLPKEYFIAGLDPDVQKTMDAAIETYKGLGAQFVEI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLPHT YA+ YY+I+ AEASSNLARYDGVR+G R E + +++MY +RS GFG+EVK Sbjct: 297 SLPHTDYAVATYYLIATAEASSNLARYDGVRFGHRSSEAQGLIDMYRKSRSEGFGEEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++YL+A+K+RTLI +DF+ AFE+ VDVILTP PT AF +G E Sbjct: 357 RIMLGTYALSSGYYDAYYLKAQKVRTLIMQDFSRAFEE-VDVILTPVAPTPAFRIG--EK 413 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ + +D+FT+ VN+AG +S+PA + +P+GLQL+G+PF EE + E Sbjct: 414 SADPLQMYLSDIFTIPVNLAGTCGMSIPAGFSKDGLPVGLQLVGRPFGEECILRAAYAFE 473 Query: 482 K 482 + Sbjct: 474 Q 474 >gi|87120475|ref|ZP_01076369.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinomonas sp. MED121] gi|86164118|gb|EAQ65389.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinomonas sp. MED121] Length = 486 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 237/486 (48%), Positives = 325/486 (66%), Gaps = 17/486 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +S +LR+K+I+++EL SY+ I N +N+YI V ++ A AAA+E+D I G A Sbjct: 6 ISSLVQKLRNKEITSLELTQSYLDKISELNPSLNSYITVCSESALAAAKEADIAIAAGTA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F T GI T S +L F P YESTVT KL GA+MLGK NMDEFA Sbjct: 66 GPLAGIPIAHKDLFCTNGIKTTCASKMLSNFVPPYESTVTAKLEQAGAIMLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S++G V +PW + PGGSSGGS+ AVA + A+ GTDTGGSIRQPA Sbjct: 126 MGSSNENSHFGLVKNPWNT-----DLVPGGSSGGSAVAVAAGMAVATTGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G G+KPTYGR SR G+I++A SLDQAG + R+ D A L+ AIAG+D D+T + Sbjct: 181 SFCGITGLKPTYGRVSRFGMIAYASSLDQAGPMARSAEDCAHLMNAIAGFDPQDSTSAEV 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LDQ + G+T+G+PKEY + L + +Q +S + GAKI +ISLP+ + Sbjct: 241 ETQDYLTNLDQPLTGLTIGLPKEYFGEGLEQGVADAIRQAVSEFEKLGAKIKDISLPNLK 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+I+P+EASSNL+R+DGVRYG R E KD+++MY +R+ GF +EV+ RIM+GT Sbjct: 301 LSIPAYYVIAPSEASSNLSRFDGVRYGHRCDEPKDLIDMYTRSRAEGFSKEVQKRIMVGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS YD++YL+A++IR LIK+DF A + VDVI+ P PT+AF +G + ++ +M Sbjct: 361 YALSEGYYDAYYLKAQRIRRLIKQDFVNALNE-VDVIMGPVAPTTAFAIGSKTDDPVAM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 D++T++VN+AG+PA+S+PA KMP+GLQ++G F E L ++ A F Sbjct: 419 -YLEDIYTLSVNLAGIPAMSIPAGF-SNKMPVGLQIMGDYFTEAKLLNI-------AHQF 469 Query: 488 RPHKWW 493 + H W Sbjct: 470 QQHTDW 475 >gi|88607922|ref|YP_505327.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaplasma phagocytophilum HZ] gi|109829565|sp|Q2GJX4|GATA_ANAPZ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|88598985|gb|ABD44455.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaplasma phagocytophilum HZ] Length = 491 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 241/491 (49%), Positives = 341/491 (69%), Gaps = 10/491 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +++ E+ + L+ K+ S ELV++YI +EN N +NA++ A A + + Sbjct: 4 ELLKLSILEAHNCLKRKEFSPTELVEAYIDEMENEN--LNAFVTKTQDIALEQARKVENL 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ G+ L G+PIG+KD F T G+ T ACS IL F P YEST++Q LW+N A M+GK Sbjct: 62 LLQGEKISPLAGMPIGVKDLFCTAGVRTTACSDILKNFVPSYESTISQNLWNNNACMMGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGS++ S +GPV +PW+ D PGGSSGGSSAAVAG LC A+IG+DTG Sbjct: 122 LNMDEFAMGSASSYSCFGPVKNPWKGPYGED-LIPGGSSGGSSAAVAGRLCIAAIGSDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPA+ G VG KPTYGRCSR G+I+FA SLDQAG++TRTV D+AI+L+A+ G+D+ Sbjct: 181 GSVRQPAALCGIVGAKPTYGRCSRWGMIAFASSLDQAGVLTRTVEDAAIMLQAMCGHDKK 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + VPD+ + + I+G +GI +EY + + + + W + +L+D GA+I Sbjct: 241 DSTSSPVDVPDFLKHISYDIKGKRIGIVREYAIPENKERECVSEMWAANLKYLQDCGAEI 300 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V+ISL HT+YALP YY+I+ +EASSNLARYDGVRYG+R EG+ I +MYE TRS+ FG+EV Sbjct: 301 VDISLHHTKYALPLYYVIASSEASSNLARYDGVRYGVRREGESIDDMYELTRSLNFGEEV 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI+IG Y LS CYD++Y +++++R + +DF EAF++ VD ILT TTP + +G + Sbjct: 361 KRRILIGAYALSYGCYDAYYDKSQRVRRRVMQDFDEAFKK-VDCILTLTTPRNF--IGMD 417 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + Y+DVFTV ++AGLPAIS+P+ L + +P+ LQ+IG+ + E +F+V + Sbjct: 418 EKLE-MIDRYYSDVFTVPASLAGLPAISIPSGLTKHGLPMSLQVIGKHYDEGEIFNVAAV 476 Query: 480 IEKEAGYFRPH 490 I K G H Sbjct: 477 IHKRTGDLLKH 487 >gi|254282253|ref|ZP_04957221.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR51-B] gi|219678456|gb|EED34805.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR51-B] Length = 491 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 241/474 (50%), Positives = 323/474 (68%), Gaps = 10/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L + D+S++EL + +++ I+ N +NA I V AR A E+D+RI GD L GIP Sbjct: 18 LANGDVSSLELTEHFLERIKRLNPTINAVITVTEDAARQDAIEADQRIAAGDQGPLTGIP 77 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F T G+ T S +LD F P Y++TV +L D G VMLGK NMDEFAMGSSNET Sbjct: 78 LLHKDIFCTNGVLTTCASRMLDNFVPPYDATVVARLRDAGTVMLGKTNMDEFAMGSSNET 137 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGP ++PW PGGSSGGS+AAVA S GTDTGGSIRQPA+ G G Sbjct: 138 SFYGPTVNPWDV-----SRVPGGSSGGSAAAVAAGFAPLSTGTDTGGSIRQPAALCGITG 192 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SRLGII+FA SLDQAG +TRTV D+A++L AIAG D D+T + PVPD+ Sbjct: 193 LKPTYGRVSRLGIIAFASSLDQAGPMTRTVEDAALMLSAIAGMDSGDSTSADRPVPDFRA 252 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L +I+G+ +GIP+EY D L I + +S L+ GAK+++I LPHT+ A+ YY Sbjct: 253 DLGGNIEGLRIGIPREYFSDDLDTAIAAQVKTALSELESEGAKLIDIDLPHTRDAIATYY 312 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEAS+NL+RYDGVR+G R + KD+ ++Y +R+ GFG EVK RI++GTYVLSS Sbjct: 313 VIAPAEASTNLSRYDGVRFGHRCAQPKDLEDLYFRSRTEGFGDEVKRRILVGTYVLSSGF 372 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD+++ RA+++R +I DF+ AFEQ VDVI P TP +AFPLG + N+ SM D++ Sbjct: 373 YDAYFKRAQQVRRIISEDFSRAFEQ-VDVIAGPATPGTAFPLGSKNNDPVSM--YMEDIY 429 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+AVN+AGLP +S+PA +P+GLQLIG+ F E TL G +++ + R Sbjct: 430 TLAVNLAGLPGLSLPAGAV-NGLPVGLQLIGRAFDESTLLKAGHRLQQRTDWHR 482 >gi|322421570|ref|YP_004200793.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacter sp. M18] gi|320127957|gb|ADW15517.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacter sp. M18] Length = 485 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 239/482 (49%), Positives = 329/482 (68%), Gaps = 9/482 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + + E ++L++K++S+VE + + IE + Q+NAYI V ++A AE +D+R Sbjct: 2 EIFDLTIHELHEKLKTKEVSSVEATRAMLDRIEAVDGQVNAYITVTPEQALVEAEAADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+G+KD F T GI T S IL+ F P Y+ T KL + GAV++GKL Sbjct: 62 ISEGNIAPLTGIPVGLKDIFITNGIRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSSNE+SY+G V +PW + PGGSSGGS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSNESSYFGAVKNPWDL-----QCAPGGSSGGSAAAIAARTATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS VG+KPTYGR SR G+I++A SLDQ G +TR V D+A+LL A+AGYD D Sbjct: 177 SIRQPASHCSCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDAALLLGAVAGYDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T VN PVPDY L ++G+ +G+PK+Y ++ L P + + + I+ K GA++ E+ Sbjct: 237 STSVNTPVPDYVAGLQAGVKGLKIGLPKQYFIEGLDPDVKRAMDEAIALYKSLGAEMHEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKH 361 SLPHT+YA+ YY+I+ AEASSNLARYDGVR+G R E + + EM+ TR+ GFG EVK Sbjct: 297 SLPHTEYAVATYYLIATAEASSNLARYDGVRFGHRTEDARGLQEMFAKTRAEGFGSEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y++A+K+RTLI +DF AF + VDV+LTP PT F +G++ Sbjct: 357 RIMLGTYALSSGYYDAYYVKAQKVRTLIMQDFLNAFNE-VDVLLTPIAPTPPFKIGEKLA 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D+FT+ VN+AG ISVPA +P+GLQLIG+PF EE + S E Sbjct: 416 DPLQM--YLSDIFTIPVNLAGTCGISVPAGFSATGLPIGLQLIGKPFGEEAILSTAYAFE 473 Query: 482 KE 483 +E Sbjct: 474 RE 475 >gi|297170499|gb|ADI21529.1| Asp-tRNAAsn/glu-tRNAGln amidotransferase A subunit and related amidases [uncultured verrucomicrobium HF0070_15G23] Length = 456 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 222/449 (49%), Positives = 309/449 (68%), Gaps = 8/449 (1%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 I + + ++NA+I + A A A+ +DK G+ L G+P+ IKD A K S Sbjct: 4 INSVDDKLNAFISYDVEDALAQADNADKARSEGEEGPLLGVPVAIKDVIAVKNHPLSCAS 63 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 IL F Y++TV +KL + GA++ G++NMDEFAMGSS E S +GP +PW +D Sbjct: 64 KILGNFESPYDATVIKKLREAGAIIFGRVNMDEFAMGSSTENSAFGPSRNPW-DID---- 118 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 FTPGGSSGGS+ AV+ C AS+G+DTGGSIRQPA+ G VG+KP+YGR SR G+++FA Sbjct: 119 FTPGGSSGGSAVAVSADECIASLGSDTGGSIRQPAALCGCVGLKPSYGRVSRYGLVAFAS 178 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLDQ G T+ V+D+AI+L+ IAG D+ D+T V PVPDY L ++GM +G+P+EY+ Sbjct: 179 SLDQIGSFTKDVKDAAIMLQVIAGSDDKDSTSVPEPVPDYTATLSGELKGMRIGLPREYQ 238 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 +D L + + ++ L++ GA++ EISLPHT+YA+ YYII+ AEAS+NLAR+DGVR Sbjct: 239 VDGLDTEVKAATESAVAKLEELGAEVKEISLPHTEYAIATYYIIATAEASANLARFDGVR 298 Query: 334 YGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 YG R+ GKD EM TR GFG EVK RI++GTYVLSS YD++YLRA+K+RTLI++DF Sbjct: 299 YGARINGKDPEEMNCKTRGAGFGDEVKRRIILGTYVLSSGYYDAYYLRAQKVRTLIRQDF 358 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 EAFE VD+I TPTTPT AF +G++ + M +D+FT++ N+AGL +S+P Sbjct: 359 LEAFEH-VDLIATPTTPTPAFKIGEKTKDPLQM--YLSDIFTISCNLAGLCGVSLPCGFS 415 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 EK +P+GLQL+G+PF E L + ++ Sbjct: 416 EKGLPIGLQLLGRPFGESDLLRAAHVYQE 444 >gi|269837953|ref|YP_003320181.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sphaerobacter thermophilus DSM 20745] gi|269787216|gb|ACZ39359.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sphaerobacter thermophilus DSM 20745] Length = 497 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 239/485 (49%), Positives = 331/485 (68%), Gaps = 9/485 (1%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ E+R RL +++SAVEL +++++ IE ++A+I V+A ARA A E+D+ Sbjct: 3 AELTNLSAIEARRRLDRREVSAVELTEAHLERIERLEPHLHAFITVMADVARAQAREADR 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 RI G+A L GIP+ +KD T T A S IL ++ Y++TV ++L + GAV +GK Sbjct: 63 RIAAGEATALTGIPVALKDILCTVDAPTTAASKILRNYQSPYDATVVRRLREQGAVFVGK 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N DEFAMGSS E S + +PW PGGSSGGS+AAVA ++G+DTG Sbjct: 123 TNTDEFAMGSSTENSAFFVTRNPWDL-----NRVPGGSSGGSAAAVAAGEAILALGSDTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA F G VG+KPTYGR SR G+++FA SLDQ G R+V D+A+LL+AI+G D Sbjct: 178 GSIRQPAGFCGVVGVKPTYGRVSRYGLLAFASSLDQIGPFARSVADAAVLLEAISGRDPN 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V+LPVP Y AL Q I+GM +GI +EY+++ + P +++ Q I+ L+ GA++VE Sbjct: 238 DSTSVDLPVPSYVDALGQDIRGMRIGIAREYQVEGVDPEVERVVQAAITELERLGAELVE 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLPHT YAL YYII+PAEAS+NLARYDGV+YGL ++ +LE Y TR GFG EVK Sbjct: 298 VSLPHTSYALATYYIIAPAEASANLARYDGVKYGLSIQEDTLLEDYLQTRGQGFGPEVKR 357 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y++A+K+RTLIKRDF EAFE+ VDVI PT+PT AF +G+ + Sbjct: 358 RIMLGTYALSSGYYDAYYVKAQKVRTLIKRDFDEAFEK-VDVIAGPTSPTVAFGIGERVD 416 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M D+FT+ NMAG+P +++P MP+ LQL+G+ F E T+ V E Sbjct: 417 DPIQM--YLADIFTIPANMAGIPGVAIPCGFAH-GMPVSLQLLGRAFDEATVLRVAHAYE 473 Query: 482 KEAGY 486 + AG+ Sbjct: 474 QAAGW 478 >gi|78221302|ref|YP_383049.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacter metallireducens GS-15] gi|109829791|sp|Q39ZK0|GATA_GEOMG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78192557|gb|ABB30324.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Geobacter metallireducens GS-15] Length = 485 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/485 (50%), Positives = 331/485 (68%), Gaps = 9/485 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E DRL+ K++S+VE + + IE + ++NAYI V ++A AAAE +D+R Sbjct: 2 ELFDLTIHELHDRLKRKELSSVEATRAMLARIEAVDPKVNAYITVTPEEALAAAEAADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I GD L GIP+ +KD F TKGI T S ILD F P Y+ T KL + GAV++GKL Sbjct: 62 IAAGDMAPLTGIPVALKDIFVTKGIRTTCASKILDNFVPPYDGTAVAKLKEAGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSS E+S +GP +PW + PGGSS GS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSGESSAFGPTRNPWNL-----ECIPGGSSSGSAAAIAARTATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG++PTYGR SR G+I++A SLDQ G +TR V D A++L+A+AG+D D Sbjct: 177 SIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLQAVAGHDPMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V +PVPDY + L ++G+ +G+PKEY ++ L P + K + I + GA+ V+I Sbjct: 237 STSVEVPVPDYAKGLTGDVKGLKLGLPKEYYIEGLDPDVKKALDEAIETYRGLGAEFVDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 SLPHT YA+ YY+I+ AEASSNLARY+GVR+G R EG ++++M+ TRS GFG EVK Sbjct: 297 SLPHTDYAVATYYLIATAEASSNLARYEGVRFGHRTEGAANLIDMFRKTRSEGFGDEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIMIGTY LSS YD++YL+A+K+RTLI +DF +AFE VD ILTP PT AF +G E Sbjct: 357 RIMIGTYALSSGYYDAYYLKAQKVRTLIMQDFLKAFE-AVDAILTPVAPTPAFKIG--EK 413 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S + +D+FT+ VN+AG A+SVPA + +P+GLQLIG+PF EET+ E Sbjct: 414 TSDPLRMYLSDIFTIPVNLAGTCAVSVPAGMSGAGLPIGLQLIGRPFGEETILRAAHAFE 473 Query: 482 KEAGY 486 + + Sbjct: 474 QATAW 478 >gi|225181781|ref|ZP_03735219.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dethiobacter alkaliphilus AHT 1] gi|225167555|gb|EEG76368.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dethiobacter alkaliphilus AHT 1] Length = 491 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 239/484 (49%), Positives = 327/484 (67%), Gaps = 12/484 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + V+E+ D+L +K+IS+ EL ++ + I++ + AY+ V Q+A A A + D + Sbjct: 2 LEKLTVAEALDKLNNKEISSRELTEAVLSRIDSVEETIKAYVTVTRQEALAKAAQIDAKR 61 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +NG+ L GIP+ +KD T GI T S +L F P Y++TVT+ L D G V++GK Sbjct: 62 LNGEKLGPLAGIPVALKDNMCTNGILTTCSSKMLHNFLPPYDATVTELLQDAGTVLVGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS E S + +PW K PGGSSGGS+AAVA S+G+DTGG Sbjct: 122 NMDEFAMGSSTENSAFFTTRNPWDV-----KRVPGGSSGGSAAAVAAGEATFSLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G +T+ V+D A+++ AIA YD D Sbjct: 177 SIRQPAAYCGVVGMKPTYGRVSRYGVVAFASSLDQVGPVTKDVKDCALVMNAIAKYDPRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T ++P PDY + LD +++GM +G+PKEY ++ + P I T ++ I L GA+ EI Sbjct: 237 TTSADVPTPDYTQGLDGNVKGMKIGVPKEYFVEEIDPGIKDTVRKAIDVLVSLGAEAEEI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKH 361 SLPHT Y +PAYY+I+PAEASSNLAR+DGV+YG R EG D ++EMY+ TRS GFG EVK Sbjct: 297 SLPHTHYGIPAYYLIAPAEASSNLARFDGVQYGFRAEGADSLIEMYKKTRSEGFGSEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD +YL+A+K+RTLIK+DF EAF++ DVI+TPTTP +AF G E+ Sbjct: 357 RIMLGTYSLSSGYYDDYYLKAQKVRTLIKQDFDEAFKK-YDVIITPTTPNTAFVSGTVED 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + ND+ T+ VNM+GLPA+SVP E +P+G+Q IG+ F E T+ E Sbjct: 416 ---LLSMYLNDICTIGVNMSGLPALSVPCGFAE-GLPVGMQFIGKAFDEATILKAAYAYE 471 Query: 482 KEAG 485 + G Sbjct: 472 QNRG 475 >gi|254417618|ref|ZP_05031354.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] gi|196175588|gb|EDX70616.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] Length = 485 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 234/479 (48%), Positives = 319/479 (66%), Gaps = 12/479 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L K+ ++VE+ + I+ ++++++ + A A A + D +I G+ Sbjct: 3 SIRELHQQLIDKERTSVEITQDALDRIQALEPKIHSFLHITADYALEQARQVDAKIAAGE 62 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD T+GI T S IL+ F P YESTVTQKL D GAVM+GK N+DE Sbjct: 63 EIGMLAGIPIGIKDNMCTQGIPTTCASRILENFVPPYESTVTQKLKDAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETS Y +PW PGGSSGGS+ AVA C ++G+DTGGSIR Sbjct: 123 FAMGSSCETSAYQQTANPWDL-----SRVPGGSSGGSATAVAASECVVALGSDTGGSIRL 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G R+V D+AILL AIAGYD D+T + Sbjct: 178 PASFCGIVGMKPTYGLVSRYGLVAYASSLDQIGPFGRSVEDAAILLNAIAGYDPNDSTSL 237 Query: 247 NLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L +PDY ++L D +G+ +GI KE + L P I +T Q I LK GA++ EIS Sbjct: 238 KLEIPDYTKSLQPDLKSKGLKIGIIKETFGEGLDPVIAQTVQNAIDQLKSLGAEVQEISC 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P +Y LPAYYII+P+EAS+NLARYDGV+YG R E +++LEMY+ TR+ GFG EVK RI Sbjct: 298 PRFRYGLPAYYIIAPSEASANLARYDGVKYGFRTPEAENLLEMYKKTRAAGFGAEVKRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTY LS+ YD++YL+A+K+RTLIK+DF +AFE+ VDV++ PT PT AF G E S Sbjct: 358 MLGTYALSAGYYDAYYLKAQKVRTLIKQDFEQAFEK-VDVLVCPTAPTPAFKAG--EKIS 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +D+ T+ VN++GLP +S+P ++ +P+G+QLIG+ EE +F V E+ Sbjct: 415 DPLTMYLSDLMTIPVNLSGLPGMSIPCGFDDQGLPIGMQLIGKVLGEEQVFQVAYAYEQ 473 >gi|221633729|ref|YP_002522955.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermomicrobium roseum DSM 5159] gi|221156757|gb|ACM05884.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermomicrobium roseum DSM 5159] Length = 489 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/492 (49%), Positives = 324/492 (65%), Gaps = 12/492 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + E+R L ++ISA+EL+++++ IE ++A+I V + AR A +D Sbjct: 3 SELVRLTAVEARALLDRREISALELLEAHLAQIERLEPTLHAFITVAPELARRQARAADD 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R+ G+ L GIP+ +KD T T A S IL GFR Y++TV +L AV +GK Sbjct: 63 RLARGEGDLLTGIPVALKDVLCTVDAPTTAGSRILQGFRSPYDATVVARLRAQDAVFVGK 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N DEFAMGSS E S YGP +PW D+ PGGSSGGS+AAVA ++G+DTG Sbjct: 123 TNTDEFAMGSSTENSAYGPTRNPW----DPDR-VPGGSSGGSAAAVAAGEAMVALGSDTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA F G VG+KPTYGR SR G+++FA SLDQ G RTV D A+LL+ IAG+D Sbjct: 178 GSIRQPAGFCGIVGLKPTYGRVSRYGLVAFASSLDQIGPFGRTVADVAMLLQVIAGHDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V LPVPDY AL I+G+ +GIP EYR+ + +++ + ++ L++ GA++V Sbjct: 238 DSTSVPLPVPDYRAALTGDIRGLRIGIPAEYRVPGMDQAVERVIEDALALLQELGAELVP 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLPHT+YAL YYII+P+EAS+NLARYDGV+YGL + G+ +LE Y TR GFG EVK Sbjct: 298 VSLPHTEYALATYYIIAPSEASANLARYDGVKYGLSLPGETLLERYLRTRGEGFGPEVKR 357 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LS+ YD++Y++A+K+RTLIKRDF EAF + VDVI PT+PT AF LG E Sbjct: 358 RIMLGTYALSAGYYDAYYVKAQKVRTLIKRDFDEAFAR-VDVIAAPTSPTVAFHLG--ER 414 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + +DVFT+ NMAGLPAI+VP +P+ LQ +G+PF E TL V E Sbjct: 415 TADPLQMYLSDVFTIPANMAGLPAIAVPCGFAH-ALPVSLQFMGRPFDEPTLLRVAHAYE 473 Query: 482 KEAGYFRPHKWW 493 + + H W Sbjct: 474 QATDW---HTRW 482 >gi|255065646|ref|ZP_05317501.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sicca ATCC 29256] gi|255049964|gb|EET45428.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sicca ATCC 29256] Length = 482 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 225/474 (47%), Positives = 305/474 (64%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK ISAVEL Y+ AI+ N +N YI + K A A +D RI G+A Sbjct: 6 LKQASQLLQSKQISAVELATEYLAAIDAQNPAINGYITLDQDKTLAEARAADARIAQGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G + S +LD F Y +TV Q L + G V LG+ NMDEFA Sbjct: 66 TALTGVPIAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLNEGIVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+AG+DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++GM +G+PKEY + + + Q I+ LK GA+ +E+SLP T Sbjct: 241 SKEDYTRDLDKPLKGMKIGLPKEYFGEGVDADVQAALQSVINLLKAQGAETIEVSLPQTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFSDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFAQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSSSGLPIGVQFIGNHFSEAKILGAAHQVQ 471 >gi|83590839|ref|YP_430848.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Moorella thermoacetica ATCC 39073] gi|109891958|sp|Q2RGY4|GATA_MOOTA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|83573753|gb|ABC20305.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Moorella thermoacetica ATCC 39073] Length = 487 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 237/487 (48%), Positives = 324/487 (66%), Gaps = 10/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ E D L K+IS+ E + I IE + ++ AY+ A++A A D Sbjct: 2 ELYYLTAHELSDLLNRKEISSEEATAAIIDRIEAVDGRVQAYLTRTAEQALEEARAVDAA 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ L G+P+ +KD T+G+ T S +L + P Y++TV ++L + GAVMLGK Sbjct: 62 RARGETLGPLAGVPMALKDNLCTEGVRTTCSSRMLADWVPPYDATVVRRLKEAGAVMLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + P +PW ++ + GG+ +A A F ++G+DTG Sbjct: 122 LNMDEFAMGSSTENSSFFPTRNPW-DLERVPGGSSGGAVAAVAAGEAYF----ALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYGR SR G+++FA SLDQ G ITR V D A++L+AIAG+D Sbjct: 177 GSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPITRDVTDCALVLEAIAGHDPL 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T +LPVPDY AL ++G+ +G+P+EY + P + ++ I+ L++ GA E Sbjct: 237 DSTSADLPVPDYRSALKPEVKGLKIGVPREYFGAGMEPEVAAIVRRAIAKLEELGAVCEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 SLPHT+YALPAYY+++PAEASSNLARYDGV YGLRV GKDI+EMY NTRS GFG EVK Sbjct: 297 TSLPHTEYALPAYYLVAPAEASSNLARYDGVSYGLRVPGKDIIEMYMNTRSQGFGPEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++YL+A K+RTLI+RDF AFE+ D++ TPT+PT AF LG++ Sbjct: 357 RIMLGTYALSSGYYDAYYLKALKVRTLIRRDFETAFEK-YDLLATPTSPTVAFRLGEKAG 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M +D+ T+ +NMAGLPA+S+P + +P+GLQLIG+PF E TL E Sbjct: 416 DPLAM--YLSDLCTIPINMAGLPALSLPCGFSQ-GLPVGLQLIGRPFAEATLLQAAYAFE 472 Query: 482 KEAGYFR 488 + Y R Sbjct: 473 QSTEYHR 479 >gi|261364025|ref|ZP_05976908.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa ATCC 25996] gi|288568055|gb|EFC89615.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa ATCC 25996] Length = 485 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 225/474 (47%), Positives = 303/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK ISAVEL Y+ AI NS +N YI + K A A +D RI G+A Sbjct: 6 LKQASQLLQSKQISAVELATEYLAAITAQNSVINGYITLDQDKTLAEARAADARIAQGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPIAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D A+LL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAVLLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++GM +G+PKEY + + Q I+ LK GA+ +E+SLP T Sbjct: 241 SKEDYTRDLDKPLKGMKIGLPKEYFGEGADADVQAALQNVINLLKAQGAETIEVSLPQTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFAQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSSSGLPIGVQFIGNHFSEAKILGAAHQVQ 471 >gi|269925180|ref|YP_003321803.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermobaculum terrenum ATCC BAA-798] gi|269788840|gb|ACZ40981.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermobaculum terrenum ATCC BAA-798] Length = 494 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 240/476 (50%), Positives = 332/476 (69%), Gaps = 10/476 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +++ E R L +K +S+VEL ++Y++ IE + Q+ +Y+ V A A A+E+DK+ Sbjct: 8 DLVDLSIRELRKLLDNKHVSSVELTEAYLRRIEQVDPQIRSYLTVTADLALQQAQEADKK 67 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + +G+ L GIP+ +KD +TKGI T S +L+ + P Y++TV +KL G V+LGKL Sbjct: 68 LASGEKSPLLGIPMALKDIISTKGIKTTCGSKMLENYIPPYDATVYEKLCAAGCVLLGKL 127 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS E S YGP +PW D T PGGSSGGS++AVA A ++G+DTGG Sbjct: 128 NMDEFAMGSSTENSAYGPTKNPW---DLTT--VPGGSSGGSASAVAAGEAAFTLGSDTGG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA+ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D A +L+ IAGYD D Sbjct: 183 SVRQPAALCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDLADVLQVIAGYDPKD 242 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V + VP Y AL + I+G+ +G+PKEY ++ + P +++ ++ I L GAKIV+I Sbjct: 243 STSVPIDVPQYGDALSEDIRGIRIGVPKEYFVEGMEPGVERAVREAIDKLGSLGAKIVDI 302 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLP T YAL YYII+PAEASSNL+RY GV YG R + +DI++MY TR GFG EVK Sbjct: 303 SLPSTDYALATYYIIAPAEASSNLSRYTGVEYGHRAPDAEDIIDMYMKTREEGFGPEVKR 362 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTYVLS+ YD++YL+A+K+RT+IK +F AF++ DVI TPT+PT AF LG + Sbjct: 363 RIMLGTYVLSAGYYDAYYLKAQKVRTIIKSEFDAAFKE-CDVIATPTSPTVAFKLGSKLQ 421 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + SM +D+FT+ NMAG+P +S+P + +P+GLQL+G+ F E TL VG Sbjct: 422 DPLSM--YLSDLFTIPANMAGIPGLSIPCGFSD-DLPVGLQLLGKAFDESTLLKVG 474 >gi|159900498|ref|YP_001546745.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Herpetosiphon aurantiacus ATCC 23779] gi|159893537|gb|ABX06617.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 489 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 231/487 (47%), Positives = 331/487 (67%), Gaps = 9/487 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + ++E+R +L +I++V+L ++ ++ I +++++ A A+ +D+RI Sbjct: 9 LHELTIAEARAQLDRGEITSVQLTEALLERIAALEPTLHSFLTQTPDLALQQAQAADERI 68 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A L GIP+GIKD TK + T S +L+ + P Y++TV KL + G V LGKLN Sbjct: 69 KAGNATSLTGIPLGIKDVIVTKDVRTTCGSKVLENWVPPYDATVVSKLNEAGTVTLGKLN 128 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G +PW + + PGGSSGGS+AAVA ++GTDTGGS Sbjct: 129 MDEFAMGSSNENSAFGGTRNPWDT-----ERVPGGSSGGSAAAVAAGQAFGTLGTDTGGS 183 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G VG+KPTYGR SR G+++FA SLDQ G RTV D A+LL+ IAG+D D+ Sbjct: 184 IRQPAALCGIVGLKPTYGRVSRYGLVAFASSLDQCGPFARTVEDVALLLETIAGHDPKDS 243 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T NLPVPDY +L I+G+ VG+P EY +D + P ++K + I +KD GA+IVE+S Sbjct: 244 TSANLPVPDYRASLTGDIRGLKVGVPSEYFVDGMEPGVEKAVRTAIEQIKDLGAEIVEVS 303 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPHT+YALP YYII+PAE S+NLAR+DGVRYG+R+EG + + E+TR FG EV+ RI Sbjct: 304 LPHTKYALPVYYIIAPAECSTNLARFDGVRYGVRLEGNGLFDEIESTRGQLFGAEVRRRI 363 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTY LSS YD++Y RA+++RTLI+RDF E + + VD++ PT+P+ AF +G++ ++ Sbjct: 364 MLGTYALSSGYYDAYYRRAQQVRTLIRRDFQEVWSK-VDLLAAPTSPSVAFKIGEKADDP 422 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +DV T+ +N+AG+P + VP + +P GLQLIG+PF E TL VG E+ Sbjct: 423 VAM--YLSDVCTLPINLAGVPGLVVPCGFSD-NLPTGLQLIGKPFDEATLLRVGHAYEQN 479 Query: 484 AGYFRPH 490 + + H Sbjct: 480 NSWHKQH 486 >gi|298368771|ref|ZP_06980089.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp. oral taxon 014 str. F0314] gi|298282774|gb|EFI24261.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp. oral taxon 014 str. F0314] Length = 485 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 225/479 (46%), Positives = 306/479 (63%), Gaps = 9/479 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ L+SK ISAVEL Y+ AI N +N YI + K A A +D RI G+A Sbjct: 6 LTQASQLLQSKQISAVELATEYLAAIAAQNPAINGYITLDQDKTLAEARAADARIAQGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G + S +LD F Y +TV Q L + G V LG+ NMDEFA Sbjct: 66 TALTGVPIAYKDIFCQTGWRSACGSKMLDNFVSPYTATVVQNLLNEGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++GM +G+PKEY + + Q I+ LK GA+ +E+SLP T Sbjct: 241 SKEDYTRDLDKPLKGMKIGLPKEYFGEGADADVQAALQNVINLLKAQGAETIEVSLPQTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRATQFSDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFAQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ E+ + Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSGNGLPIGVQFIGNHFSEAKILGAAHQVQLESDW 476 >gi|67922989|ref|ZP_00516483.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Crocosphaera watsonii WH 8501] gi|67855137|gb|EAM50402.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Crocosphaera watsonii WH 8501] Length = 482 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 241/476 (50%), Positives = 319/476 (67%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 ++ E +L +K+ SAVE+ ++ I + Q+ ++++V A A A++ D +I N Sbjct: 3 SIRELHQQLVNKERSAVEITTEALERINAVDEQVKSFLQVTADHALETAKKVDAKIAKNE 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPIGIKD T GI T S IL F P YESTVTQKL D GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNMCTTGIKTTCGSQILANFVPPYESTVTQKLKDAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW PGGSSGGS+AAVA C S+G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYQVTANPWDL-----SRVPGGSSGGSAAAVAASECVVSLGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYG SR G++++A SLDQ G R V D+AILL AIAGYD D+T + Sbjct: 178 PASLCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFARNVEDAAILLGAIAGYDAKDSTSI 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N P+PDY + L S++G+TVG+ E + L P + KT Q I+ LK GAK+V IS P Sbjct: 238 NTPIPDYTQFLKPSLEGLTVGVIDETFGEGLDPVVAKTVQDAIAHLKTLGAKVVNISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EASSNLARYD V+YG+R + +++MY TR+ GFG EVK RIMIG Sbjct: 298 FRYGLPAYYIIAPSEASSNLARYDAVKYGIREDADTLIDMYTKTRAKGFGNEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF FE+ VDV++ PT+PT+AF G++ ++ SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKQDFDAGFEK-VDVLVCPTSPTTAFKAGEKTSDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ T+ VN+AGLP +S+P E+ +P+GLQLIG E LF V E+ Sbjct: 417 --YLSDLMTIPVNLAGLPGMSIPCGFDEQNLPIGLQLIGNVLEEGKLFQVAYAYEQ 470 >gi|303239318|ref|ZP_07325846.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acetivibrio cellulolyticus CD2] gi|302593104|gb|EFL62824.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acetivibrio cellulolyticus CD2] Length = 485 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 231/488 (47%), Positives = 320/488 (65%), Gaps = 10/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + V E D LR K SAVE+ S++ IE +S++ +Y+ V+ + A A E+ ++ Sbjct: 2 ELYELTVHEMSDLLRGKKASAVEITKSFLDRIEKIDSKVGSYLSVLGEDAVKRASEAQEK 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+A+ L GIP+ +KD T+G+ T S +L F P Y +TV++KL + AV++GK Sbjct: 62 IDKGEAKSTLAGIPVALKDNICTEGVKTTCASQMLHNFVPPYNATVSKKLLADNAVIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S E S++ P +PW ++ + GGS+ +A + GF ++G+DTG Sbjct: 122 LNMDEFAMGGSTENSHFKPTRNPW-DLERVPGGSSGGSAAAVAADLTGF----ALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYG SR G+++FA SLDQ G +T+ V D AI L I GYD Sbjct: 177 GSIRQPASFCGVVGMKPTYGAVSRFGLVAFASSLDQIGPLTKDVTDCAIALNCITGYDPM 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + PDY +AL ++GM +GIP EY + L+P + K + LK GA+ E Sbjct: 237 DSTSAKVEYPDYTKALVNDVKGMKIGIPSEYMGEGLNPEVRKAVLDAVEVLKKLGAECEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 SLP T+YA+PAYY+IS AEASSNLARYDGV+YG R + D+L++Y+ +RS GFG EVK Sbjct: 297 FSLPLTEYAIPAYYLISSAEASSNLARYDGVKYGYRAPKYTDLLDLYKQSRSDGFGTEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y +A ++RTLIK F EAF + DVIL PT PT+A+ LG++ Sbjct: 357 RRIMLGTYALSSGYYDAYYKKALQVRTLIKNGFDEAFSK-YDVILGPTAPTTAYKLGEKA 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +N M D++TV+VN+AGLP + VP K++P+GLQ IG+PF E TL VG Sbjct: 416 DNPLEM--YLGDIYTVSVNIAGLPGLVVPCGFDSKELPIGLQFIGKPFDESTLLKVGFTF 473 Query: 481 EKEAGYFR 488 E+ Y + Sbjct: 474 EQNTDYHK 481 >gi|302038221|ref|YP_003798543.1| glutamyl-tRNA(gln) amidotransferase subunit A [Candidatus Nitrospira defluvii] gi|300606285|emb|CBK42618.1| Glutamyl-tRNA(Gln) amidotransferase, subunit A [Candidatus Nitrospira defluvii] Length = 491 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 224/485 (46%), Positives = 320/485 (65%), Gaps = 11/485 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++ L+ + +SE + + + D++A E+V +Y + ++NAY+ A A AE D Sbjct: 3 LTLLHKLTLSELQRKFTAGDVTATEIVRAYFLRVAQVEPKVNAYLTQCKDAALAQAERLD 62 Query: 61 KRIIN-GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + + +P+ +KD T+G+ T S +LD F P Y++TV KL ++L Sbjct: 63 QALKGWRKTTPMMAMPLAVKDNICTEGVRTTCASRMLDTFVPPYDATVVAKLRAQSYLLL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S +G +PW + PGGSSGGS+ AVA C A++G+D Sbjct: 123 GKTNLDEFAMGSSTENSAFGASRNPWNI-----QTVPGGSSGGSAVAVAADECVAALGSD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYGR SR G+++FA SLDQ G IT+ V D+A+LL AIAG+D Sbjct: 178 TGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITKDVTDAALLLGAIAGHD 237 Query: 240 ECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T N+PVPDY +AL + ++ + VG+P EY D L P +D+ + I L++ GA Sbjct: 238 PRDSTSANVPVPDYLKALKRKDLKRLKVGVPAEYFADGLDPEVDQAVRTAIEGLRELGAD 297 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I EI LP T A+ YY+I+ AEASSNLARYDGV++GLR E KD+L+MY TR+ GFG Sbjct: 298 IREIKLPTTDAAVATYYVIATAEASSNLARYDGVKFGLRAAESKDLLDMYLKTRAEGFGP 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTYVLS+ YD++Y +A+ +RTLI+++F AF Q VD+I+TP TPT+AF G Sbjct: 358 EVKRRIMLGTYVLSAGYYDAYYGKAQAVRTLIRQEFEAAF-QTVDLIVTPVTPTTAFKFG 416 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + M +D++T++ N+AGLPAI++P + +P+G QLIG+PF EETL Sbjct: 417 EKAQDPLQM--YLSDIYTISANLAGLPAIALPCGFSKAGLPIGFQLIGRPFEEETLLRGA 474 Query: 478 QIIEK 482 E+ Sbjct: 475 HAYEQ 479 >gi|284929221|ref|YP_003421743.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [cyanobacterium UCYN-A] gi|284809665|gb|ADB95362.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [cyanobacterium UCYN-A] Length = 481 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 236/476 (49%), Positives = 319/476 (67%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +KD +AVE+ ++ IE +S++ ++++V A A + A + D +I N + Sbjct: 3 SIRELHQQLINKDKTAVEITTEALERIEAVDSKVKSFLQVTADHALSKARQIDHKIANKE 62 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD T GI T S IL F P YESTVTQKL D GAVM+GK N+DE Sbjct: 63 EIGFLSGIPIGIKDNMVTSGITTTCGSKILKNFVPSYESTVTQKLQDAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW PGGSSGGS+AAVA C+ SIG+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYQTTANPWDL-----SRVPGGSSGGSAAAVAAKECSVSIGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG+KPTYG SR G++++A SLDQ G R+V D+AI+L AIAG+D D+T + Sbjct: 178 PAALCGVVGLKPTYGLVSRFGLVAYASSLDQVGPFARSVEDAAIVLGAIAGHDPKDSTSI 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 VPDY + L S++G+T+G+ +E +D + + T Q I LK GAK+V +S P Sbjct: 238 KFKVPDYTKFLKLSLKGLTIGVIEETFMDGVEQEVSNTVQNAIDHLKTLGAKVVNVSCPS 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYY+I+PAEASSNLARYD V+YGLR + +L+MY NTR+ G G EVK RIM+G Sbjct: 298 FRYGLPAYYVIAPAEASSNLARYDAVKYGLREQSDTLLDMYTNTRTEGLGAEVKRRIMLG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK DF +FE+ VD++++PT+PT+AF G E S + Sbjct: 358 TYTLSTGYYDAYYLKAQKVRTLIKEDFNTSFEK-VDILVSPTSPTTAFKAG--EKISKPL 414 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ T+ VN+AGLP +S+P +K +P+GLQLIG E LF VG E+ Sbjct: 415 NMYLSDLMTIPVNLAGLPGMSIPCGFDKKGLPVGLQLIGNILEEGKLFQVGYAYEQ 470 >gi|254672151|emb|CBA04948.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria meningitidis alpha275] Length = 481 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/467 (47%), Positives = 303/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV QKL D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQKLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++GM +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGMKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|261377509|ref|ZP_05982082.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria cinerea ATCC 14685] gi|269146244|gb|EEZ72662.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria cinerea ATCC 14685] Length = 481 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 225/467 (48%), Positives = 303/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NET Sbjct: 73 VAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L AS+G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNL-----EHVPGGSSGGSAAVVAARLAPASLGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVQTALQHIIDLLKAQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + S + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---SSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFSEARILGAAHQIQ 470 >gi|325268114|ref|ZP_08134760.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Kingella denitrificans ATCC 33394] gi|324980499|gb|EGC16165.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Kingella denitrificans ATCC 33394] Length = 482 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 224/467 (47%), Positives = 296/467 (63%), Gaps = 9/467 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL Y+ AI N +N YI + K A A +D RI G+A L G+P Sbjct: 13 LQSKQISAVELATEYLAAIAAQNPAINGYITLDQDKTLAEARAADARIAQGNATALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NET Sbjct: 73 IAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L ++G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPVALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLERSKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++GM +G+PKEY + + Q I LK GA+ +E+SLP T ++PAYY Sbjct: 248 DLDKPLKGMKIGLPKEYFGEGADADVQAALQNVIDLLKAQGAETIEVSLPQTALSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY NTR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYSNTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + +N M +D++ Sbjct: 368 YDAYYLKAQKLRRLVANDFQTAFAQ-CDFILAPTAPTAAPKLGSDIHNPVQM--YLSDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++ A +P+G+Q IG F E + ++ Sbjct: 425 TIAVNLAGLPALTLSAGFSSSGLPIGVQFIGNHFSEAKILGAAHQVQ 471 >gi|118581491|ref|YP_902741.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pelobacter propionicus DSM 2379] gi|166217694|sp|A1ATL3|GATA_PELPD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118504201|gb|ABL00684.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pelobacter propionicus DSM 2379] Length = 485 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/477 (50%), Positives = 328/477 (68%), Gaps = 9/477 (1%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E +L+SK++S+ E + + I ++NA+I V ++A A AE +D+RI G Sbjct: 6 LTLHELHAKLKSKEVSSREATSAMLDRIAELEPRINAFITVTPERALAEAEAADRRIAAG 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 +A L GIP+ +KD F T+G T S IL+ F P Y +T +KL G V+LGKLN DE Sbjct: 66 EADVLTGIPLAVKDIFLTEGTLTTCGSRILNNFIPPYSATSFEKLKQRGMVLLGKLNQDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNE+S GP +PW +TD PGGSSGGS+AA+A ++GTDTGGSIRQ Sbjct: 126 FAMGSSNESSASGPCRNPW----NTDCI-PGGSSGGSAAAIAARQATVTLGTDTGGSIRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYGR SR G+I++A SLDQ G +TR V D AI+L A+AG+D D+T V Sbjct: 181 PASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDCAIMLGALAGHDPKDSTSV 240 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY+ AL I+G+ +G+P+EY ++ L P + + Q I + GA+ EISLPH Sbjct: 241 DRPVPDYQAALTNDIRGLRIGLPREYFIEGLDPDVQASMDQAIETYRRLGAEFTEISLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 T YA+ +YY+I+ AEAS+NLARYDGVR+G R E + +LEMY +RS GFG EVK RIM+ Sbjct: 301 TDYAVASYYLIATAEASANLARYDGVRFGHRAEQAEGLLEMYSRSRSQGFGSEVKRRIML 360 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++YL+A+K+RTLI DF +AFE GVD+ILTP PT AF +G++ N+ Sbjct: 361 GTYALSSGYYDAYYLKAQKVRTLIMADFIQAFE-GVDLILTPVAPTPAFRIGEKVNDPLQ 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M +D+FT+ VN+AG A+S+PA + + +P+G+QLIG+PF EET+ E+ Sbjct: 420 M--YLSDIFTIPVNLAGTCAMSLPAGISGQGLPIGVQLIGKPFGEETILRAAHAFEQ 474 >gi|237755957|ref|ZP_04584545.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfurihydrogenibium yellowstonense SS-5] gi|237691882|gb|EEP60902.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfurihydrogenibium yellowstonense SS-5] Length = 485 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/477 (46%), Positives = 321/477 (67%), Gaps = 11/477 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ E D ++SK++ E+V+++I+ ++ AY+ + A A++ D+ Sbjct: 2 ELWKKSLKELSDLVKSKEVKPSEIVEAFIERKNQVEPKIKAYVTALDDLALEEAKKRDEE 61 Query: 63 IIN-GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + + DL G+PI IKD +TK I T S +L+ F P Y++TV ++L G V+ GK Sbjct: 62 LTKLENIPDLFGLPIAIKDNISTKDIRTTCSSKMLENFVPVYDATVIERLKSQGYVITGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSS E S + P +PW + PGGSSGGS+A VA + AS+G+DTG Sbjct: 122 TNLDEFAMGSSTENSAFFPTRNPWDL-----ERVPGGSSGGSAAVVAAGMAPASLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYGR SR G+++FA SLDQ G RTV D A+++ I+G D Sbjct: 177 GSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPFGRTVEDVAMIMNVISGKDPK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T ++PVP+Y +L++ ++G+ +G+PKE+ + L+P I + + L+ G + E Sbjct: 237 DSTSRSIPVPNYLESLNKDVKGLKIGLPKEFYTEDLNPQIKEIILNAVKQLEKEGMIVEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 ISLP+T+YA+ YYII+P+EASSNLAR+DGVRYG R E K++ EMY TR GFG EVK Sbjct: 297 ISLPYTKYAIETYYIIAPSEASSNLARFDGVRYGYRAKEYKNLEEMYSKTRDEGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTY LSS YD++YL+A+K+RTLI +D+ AFE+ VDVI+TPTTP AF +G++ Sbjct: 357 RRIMIGTYALSSGYYDAYYLKAQKVRTLIYQDYMNAFEK-VDVIITPTTPDVAFKIGEKS 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N+ M +D+FTV+ NMA +PAIS+P + +P+G+Q++G+PF EET+ V Sbjct: 416 NDPIQM--YLSDIFTVSANMATVPAISIPCGF-KDNLPVGMQIVGKPFDEETILQVA 469 >gi|294668799|ref|ZP_06733892.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309316|gb|EFE50559.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 482 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/474 (47%), Positives = 301/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK IS+VEL Y+ AI N +N YI + K A A +D I G+A Sbjct: 6 LKQASQLLQSKQISSVELATEYLAAIAAQNPAINGYITLDQDKTLAEARAADAHIAQGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPIAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++GM +G+PKEY + + Q I+ LK GA+ +E+SLP T Sbjct: 241 SKEDYTRDLDKPLKGMKIGLPKEYFGEGADADVQAALQNVINLLKAQGAETIEVSLPQTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFTQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSGSGLPIGVQFIGNHFSEAKILGAAHQVQ 471 >gi|225025269|ref|ZP_03714461.1| hypothetical protein EIKCOROL_02166 [Eikenella corrodens ATCC 23834] gi|224942027|gb|EEG23236.1| hypothetical protein EIKCOROL_02166 [Eikenella corrodens ATCC 23834] Length = 482 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/474 (46%), Positives = 301/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK IS+VEL Y+ AI N +N YI + K A A +D RI G+A Sbjct: 6 LKQASQLLQSKQISSVELATEYLAAIAAQNPAINGYITLDQDKTLAEARAADARIAQGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPIAYKDIFCQTGWRSACGSKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R L++ ++GM +G+PKEY + + Q I LK GA+ +E+S+P T Sbjct: 241 SKEDYTRDLNKPLKGMKIGLPKEYFGEGADADVQAALQNVIDLLKAQGAETIEVSMPQTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFAQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSSSGLPIGVQFIGNHFSETKILGAAHQVQ 471 >gi|188996431|ref|YP_001930682.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|229464474|sp|B2V855|GATA_SULSY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|188931498|gb|ACD66128.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 485 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/477 (46%), Positives = 320/477 (67%), Gaps = 11/477 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ E D ++SK++ E+V+++I+ ++ AY+ + A A++ D+ Sbjct: 2 ELWKKSLKELSDLVKSKEVKPSEIVEAFIERKNQVEPKIKAYVTALDDLALEKAKKRDQE 61 Query: 63 IIN-GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + + DL G+PI IKD +TK I T S +L+ F P Y++TV ++L G V+ GK Sbjct: 62 LTKLENIPDLFGLPIAIKDNISTKDIKTTCSSKMLENFVPVYDATVIERLKSQGYVITGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSS E S + P +PW + PGGSSGGS+A VA + AS+G+DTG Sbjct: 122 TNLDEFAMGSSTENSAFFPTRNPWDL-----ERVPGGSSGGSAAVVASGMAPASLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYGR SR G+++FA SLDQ G RTV D A+++ I+G D Sbjct: 177 GSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPFGRTVEDVAMIMNVISGKDPK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T ++PVP+Y +L++ ++G+ +G+PKE+ + L+P I + + L+ G E Sbjct: 237 DSTSRSIPVPNYLESLNKDVKGLKIGLPKEFYTEDLNPQIKEIILNAVKQLEKEGMTAHE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 ISLP+T+YA+ YYII+P+EASSNLAR+DGVRYG R E K++ EMY TR GFG EVK Sbjct: 297 ISLPYTKYAIETYYIIAPSEASSNLARFDGVRYGYRAKEYKNLEEMYSKTRDEGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTY LSS YD++YL+A+K+RTLI +D+ AFE+ VDVI+TPTTP AF +G++ Sbjct: 357 RRIMIGTYALSSGYYDAYYLKAQKVRTLIYQDYMNAFEK-VDVIITPTTPDVAFKIGEKS 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N+ M +D+FTV+ NMA +PA+S+P + +P+G+Q+IG+PF EET+ V Sbjct: 416 NDPIQM--YLSDIFTVSANMATVPALSIPCGF-KDNLPVGMQIIGKPFDEETILQVA 469 >gi|51244495|ref|YP_064379.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Desulfotalea psychrophila LSv54] gi|81642923|sp|Q6AQK1|GATA_DESPS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|50875532|emb|CAG35372.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A [Desulfotalea psychrophila LSv54] Length = 485 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/477 (46%), Positives = 316/477 (66%), Gaps = 9/477 (1%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E+ +LR+ DIS+VEL S +Q I + ++ +I V + A A A+ +DK + NG Sbjct: 6 LSIEEAAAKLRAGDISSVELTQSCLQRIGDVEDRVKGFITVDEEGALAQAKAADKALQNG 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIP+ IKD A K + S +L+ F Y +T+ KL GAV LGK+ MDE Sbjct: 66 ETNPLCGIPMSIKDLLAVKDLPMTCGSKMLEKFIAPYNATIVDKLQGAGAVNLGKVTMDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS++ET +G +PW+ + + GGSSGGS+ VA C SIGTDTGGSIRQ Sbjct: 126 FAMGSTSETCAFGVPQNPWK-----EGYVAGGSSGGSAVTVAAQECFFSIGTDTGGSIRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG+KPTYGR SR G+ +FA SLDQAG + RTV D+A+++ +I GYD D+T + Sbjct: 181 PAALCGVVGMKPTYGRVSRYGLTAFASSLDQAGPLCRTVADTALVMNSICGYDPMDSTSI 240 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N VPDY +L + ++G+ +GIPKEY L ++K + I+ L AGA+IV++SLPH Sbjct: 241 NQEVPDYTASLVEGVKGLRIGIPKEYFAKGLDSEVEKVVRNAIAVLASAGAEIVDVSLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMI 365 T+Y + YY+I+PAEAS+NL+RYDG YG R +E K + +MY++TRS GFG EVK RI+I Sbjct: 301 TEYCVAVYYLIAPAEASTNLSRYDGALYGYRDLESKTLEDMYKDTRSAGFGDEVKKRILI 360 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A ++RTLI DF A+ + DV+L+P TPT A+ LG + ++ Sbjct: 361 GTYALSSGYYDAYYKKASQVRTLIIEDFKNAY-RSCDVLLSPVTPTPAWKLGAKSDD--P 417 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +D+ TV+ N+AG+P +SVP E +P+G+QL G F+EE L V +EK Sbjct: 418 LAIYLSDIMTVSANLAGIPGMSVPGGFTEDGLPVGIQLQGSHFQEEILLKVAYNLEK 474 >gi|218768373|ref|YP_002342885.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria meningitidis Z2491] gi|24211723|sp|Q9JTZ5|GATA_NEIMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|121052381|emb|CAM08713.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis Z2491] gi|319410619|emb|CBY90988.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A) [Neisseria meningitidis WUE 2594] Length = 481 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 222/467 (47%), Positives = 303/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L GIP Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV QKL D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQKLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFSDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSSGGLPIGVQLIGNYFSEAKILGAAHQIQ 470 >gi|39998470|ref|NP_954421.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacter sulfurreducens PCA] gi|81700888|sp|Q746Y7|GATA_GEOSL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|39985417|gb|AAR36771.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacter sulfurreducens PCA] Length = 485 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/487 (49%), Positives = 330/487 (67%), Gaps = 9/487 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E D+L +++S+VE + + IE ++S++NAYI V +A AAAE +D+R Sbjct: 2 ELFELTLHELHDKLAKREVSSVEATRALLARIEATDSRVNAYITVTPDEALAAAEAADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L G+P+ +KD F T+GI T S IL F P Y+ TV KL + GAV++GKL Sbjct: 62 IAAGGLTPLTGVPVALKDIFVTRGIRTTCGSKILGNFIPPYDGTVVAKLREAGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSS E+S +G +PW PGGSS GS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSGESSAFGATKNPWNL-----ACIPGGSSSGSAAAIAARSATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG++PTYGR SR G+I++A SLDQ G +TR V D A++L A+AG+D D Sbjct: 177 SIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLGAVAGHDPLD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++LPVPDY AL ++G+ +G+PKEY L+ L P + + I + GA+ VE+ Sbjct: 237 STSIDLPVPDYAAALTGQVKGLRLGLPKEYYLEGLDPDVKRALDAAIETYRGLGAEFVEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 SLPHT YA+ YY+I+ AEASSNLARYDGVR+G R G ++++M+ +R+ GFG EVK Sbjct: 297 SLPHTDYAVATYYLIATAEASSNLARYDGVRFGHRAAGAANLIDMFRRSRAEGFGAEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIMIGTY LSS YD++YL+A+K+RTLI +DF +AFEQ VD +LTP PT AF +G++ + Sbjct: 357 RIMIGTYALSSGYYDAYYLKAQKVRTLIMQDFMKAFEQ-VDALLTPVAPTPAFKIGEKVD 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D+FT+ VN+AG AISVPA + +P+GLQLIG+PF EET+ E Sbjct: 416 DPLQM--YLSDIFTIPVNLAGTCAISVPAGMSAAGLPIGLQLIGRPFGEETILRAAHAFE 473 Query: 482 KEAGYFR 488 + + R Sbjct: 474 QATEWHR 480 >gi|319790611|ref|YP_004152244.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermovibrio ammonificans HB-1] gi|317115113|gb|ADU97603.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermovibrio ammonificans HB-1] Length = 487 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 238/485 (49%), Positives = 331/485 (68%), Gaps = 12/485 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK- 61 EL ++ E ++ K++ ELV + I+ IE + ++NAYI V AQ+A A+ +D+ Sbjct: 2 ELLEKSLKELHTLIKKKELKPSELVQANIERIEQTEEKLNAYITVCAQEALEKAKVADEE 61 Query: 62 --RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ + +L GIPI IKD +GI S +L+ F Y++TVT+KL + GA+ + Sbjct: 62 LLRLSEDEIPELFGIPIAIKDNINVEGIRMTCASRMLESFISPYDATVTKKLRERGAIFI 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETSY+GP +PW D + PGGSSGGS+AAVA AS+G+D Sbjct: 122 GKNNLDEFAMGSSTETSYFGPTKNPW---DFSR--VPGGSSGGSAAAVAARSALASLGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYGR SR G+ +FA SLDQ G IT+ V D+A LL I+G D Sbjct: 177 TGGSIRQPAAFCGVVGLKPTYGRVSRYGLTAFASSLDQIGPITKNVEDAAYLLNIISGLD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT LPVP++ AL+ ++G+ VG+PKEY ++ + P + ++ L+ GA++ Sbjct: 237 SKDATSAKLPVPNFLEALNGEVKGLKVGLPKEYFVEGIEPEVKALVEEAARKLEKLGAEL 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 VE+SLP T+Y++ YYII+PAEASSNL R+DGVRY R + K +++MY TR+ GFG E Sbjct: 297 VEVSLPTTKYSVETYYIIAPAEASSNLGRFDGVRYTYRAKNYKGLVDMYCKTRAEGFGDE 356 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD++YL+A+K+RTLI DF +AFE VDV+LTP TP AF +G+ Sbjct: 357 VKRRIMIGTYTLSAGYYDAYYLKAQKVRTLIYNDFQKAFES-VDVLLTPVTPEVAFKIGE 415 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M +DVFT+AVN+AGLPA+S+P L + +P+G+QLIG+ F EET+ V Sbjct: 416 KTDDPIKM--YLSDVFTIAVNLAGLPALSLPCGLTAQNLPVGVQLIGKAFDEETILKVAH 473 Query: 479 IIEKE 483 +E E Sbjct: 474 ALEAE 478 >gi|296132392|ref|YP_003639639.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermincola sp. JR] gi|296030970|gb|ADG81738.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermincola potens JR] Length = 485 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/482 (49%), Positives = 322/482 (66%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E L+SK +S+ E+ S + I+ ++ A++ + A A A+E D +I G+ Sbjct: 8 IHELHQLLKSKQVSSEEITKSVFERIDQVEDKVKAFVTQTREIALAKAKEVDDKIARGEE 67 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ IKD T+GI T S +L F P Y++TV +KL D GAVM+GK N+DEF Sbjct: 68 IGPLAGIPVVIKDNMCTRGILTTCSSKMLHNFVPPYDATVVKKLADAGAVMIGKSNLDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + P +PW + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 128 AMGSSTENSRFFPTRNPWDL-----ERVPGGSSGGSAAAVAADETVYSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+++FA SLDQ G ++ V D+AI+L IAG+D CD+T VN Sbjct: 183 ASFCGVVGLKPTYGLVSRYGLVAFASSLDQIGPFSKDVTDAAIILNTIAGHDPCDSTSVN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY ++L ++G+ +GIPKEY ++ + P + + I + GA E+SLPHT Sbjct: 243 YNVPDYTKSLVNDVRGIKIGIPKEYFVEGIQPDVRGLIEDAIKKFESLGAVCEEMSLPHT 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YALP YYI++PAEASSNLARYDGV YG R E DI+ MY TRS GFG EVK RIM+G Sbjct: 303 EYALPVYYILAPAEASSNLARYDGVGYGYRDESADDIVSMYMKTRSEGFGAEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LSS YD++YL+A K+RTLIK+DF AFE+ DVILTPT+P++AF G++ +N M Sbjct: 363 TYALSSGYYDAYYLKALKVRTLIKQDFDRAFEK-YDVILTPTSPSTAFKFGEKSDNPMEM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ T+AVN+AG+P IS+P L + +P+GLQLIG+P EETLF V E+ + Sbjct: 422 --YLSDICTIAVNLAGIPGISIPCGLSQ-GLPVGLQLIGKPLGEETLFRVAYTYEQNTDH 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|160871929|ref|ZP_02062061.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Rickettsiella grylli] gi|159120728|gb|EDP46066.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Rickettsiella grylli] Length = 486 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/486 (48%), Positives = 321/486 (66%), Gaps = 10/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ ++E L +K IS+ EL ++ I++ + N++I V A A+++D Sbjct: 2 MHHHTLTELSAALHAKKISSTELTQHFLTRIDHYDKTFNSFIRVTHASALEQAQQADLCY 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G A L GIPI KD F TKGI T S +L F P Y++T+ L G V+LGK N Sbjct: 62 HKGRAGPLTGIPIAHKDIFCTKGIETSCASKMLAYFIPPYDATLVHALKQAGTVLLGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S+YG V +PW PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 122 MDEFAMGSSNENSFYGSVKNPWDI-----SRVPGGSSGGSSAAVAARLTPAATGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G+KPTYGR SR G+I+FA SLDQAG +T T D+A+L+ +AG+DE D+ Sbjct: 177 IRQPAALCNLTGLKPTYGRVSRYGLIAFASSLDQAGPMTHTAEDAALLMNVMAGFDEKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY L+ S+ G+ +G+PKEY D L P++ T + I + GAKI +S Sbjct: 237 TSIDCPVPDYRLTLNDSLDGLRIGLPKEYFSDALDPSVATTIETAIKCYEQLGAKISAVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHR 362 LP+ +P YYII+ AE SSNLARYDGVRYG R D+ ++YE TR GFG EVK R Sbjct: 297 LPNCPLVIPPYYIIASAECSSNLARYDGVRYGYRCNNPVDLNDLYERTRGEGFGNEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 +++GTYVLS+ YD++Y++A+KIR L+ ++F +AF Q VD++L PTTPT+AF LG++ N+ Sbjct: 357 LLMGTYVLSADSYDAYYVKAQKIRALLIQEFEDAF-QNVDILLGPTTPTTAFKLGEKTND 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D++T+AVN+AGLPAIS+PA + +PLG+QLIG+PF E L +V ++ Sbjct: 416 PVSM--YLSDIYTIAVNLAGLPAISIPAGFID-NLPLGMQLIGRPFSEAKLLNVAHRYQQ 472 Query: 483 EAGYFR 488 E + + Sbjct: 473 ETNWHK 478 >gi|308389473|gb|ADO31793.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis alpha710] gi|325130407|gb|EGC53171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis OX99.30304] gi|325136142|gb|EGC58750.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M0579] gi|325136451|gb|EGC59058.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M0579] gi|325201935|gb|ADY97389.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M01-240149] gi|325204349|gb|ADY99802.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M01-240355] gi|325205877|gb|ADZ01330.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M04-240196] gi|325208314|gb|ADZ03766.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis NZ-05/33] Length = 481 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/467 (47%), Positives = 303/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I+ LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGVKIGLPKEYFGEGNSADVQTALQNTINLLKTQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|288942554|ref|YP_003444794.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Allochromatium vinosum DSM 180] gi|288897926|gb|ADC63762.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Allochromatium vinosum DSM 180] Length = 484 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/464 (51%), Positives = 324/464 (69%), Gaps = 10/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR + S+VEL Y++ I + +N++I V A+ A A AE +D+ + +G+A L GIP Sbjct: 13 LRLRTYSSVELTRHYLERIARLDPALNSFITVAAESALATAERADQTLRSGEAGPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T+G+ T S +LDGF Y++T+ ++L GAV+LGK NMDEFAMGSSNET Sbjct: 73 IAHKDIFCTQGLKTSCGSRMLDGFVAPYDATIVERLAAAGAVVLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW + PGGSSGGS+AAVA LCAA+ +DTGGSIRQPA+ G G Sbjct: 133 SWYGPVRNPWDAAR-----VPGGSSGGSAAAVAARLCAAATASDTGGSIRQPAALCGVTG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYGRCSR G+I+FA SLDQAG++ R+ D+A +L +AG+DE D+T ++PVPDY Sbjct: 188 IKPTYGRCSRWGMIAFASSLDQAGVMARSAADAAFILDEMAGFDERDSTSADVPVPDYVD 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 ALD + G+ +G+PKEY L I I + GA+IVEISLP++ ++P YY Sbjct: 248 ALDDDLHGLRIGLPKEYFGAGLDARIGDAVMAAIKEYEALGAEIVEISLPNSPLSVPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAE SSNLAR+DGVRYG R + KD+ ++YE +R+ GFG EV+ RIMIGTYVLS+ Sbjct: 308 VVAPAECSSNLARFDGVRYGHRCDNPKDLQDLYERSRAEGFGPEVQRRIMIGTYVLSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LI DF AFEQ VDVI+ PT+PT+AF LG + ++ SM ND++ Sbjct: 368 YDAYYLKAQKIRQLIADDFKRAFEQ-VDVIMGPTSPTTAFQLGSKMDDPVSM--YLNDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+A N+AGLP +S+P + +P+GLQ+IG F+E L +V Sbjct: 425 TIATNLAGLPGMSIPVEPVD-GLPVGLQIIGNYFQEARLLNVAH 467 >gi|161870226|ref|YP_001599396.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria meningitidis 053442] gi|189045255|sp|A9M003|GATA_NEIM0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|161595779|gb|ABX73439.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis 053442] Length = 481 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 222/467 (47%), Positives = 301/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L GIP Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISSYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF F + D+IL PT PT+A +G + S + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTVFAR-CDLILAPTAPTAAPKIGAD---SSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLIGNYFAEARILGAAHQIQ 470 >gi|309378844|emb|CBX22549.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 481 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/467 (47%), Positives = 302/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL + Y+ AI N +N YI + +K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELANEYLAAIAEKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGISG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVQTALQNTIDLLKTQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFSEARILGAAHQIQ 470 >gi|298507414|gb|ADI86137.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Geobacter sulfurreducens KN400] Length = 485 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/487 (49%), Positives = 330/487 (67%), Gaps = 9/487 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E D+L +++S+VE + + IE ++S++NAYI V +A AAAE +D+R Sbjct: 2 ELFELTLHELHDKLAKREVSSVEATRALLARIEATDSRVNAYITVTPDEALAAAEAADRR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L G+P+ +KD F T+GI T S IL F P Y+ TV KL + GAV++GKL Sbjct: 62 IAAGGLTPLTGVPVALKDIFVTRGIRTTCGSKILGNFIPPYDGTVVAKLREAGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSS E+S +G +PW PGGSS GS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSGESSAFGATKNPWNL-----ACIPGGSSSGSAAAIAARSATATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG++PTYGR SR G+I++A SLDQ G +TR V D A++L A+AG+D D Sbjct: 177 SIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLGAVAGHDPLD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++LPVPDY AL ++G+ +G+PKEY + L P + + I + GA+ VE+ Sbjct: 237 STSIDLPVPDYAAALTGQVKGLRLGLPKEYYREGLDPDVKRALDVAIEAYRGLGAEFVEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 SLPHT YA+ YY+I+ AEASSNLARYDGVR+G R +G ++++M+ +R+ GFG EVK Sbjct: 297 SLPHTDYAVATYYLIATAEASSNLARYDGVRFGHRADGAANLIDMFRRSRAEGFGAEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIMIGTY LSS YD++YL+A+K+RTLI +DF +AFEQ VD +LTP PT AF +G++ + Sbjct: 357 RIMIGTYALSSGYYDAYYLKAQKVRTLIMQDFMKAFEQ-VDALLTPVAPTPAFKIGEKVD 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D+FT+ VN+AG AISVPA + +P+GLQLIG+PF EET+ E Sbjct: 416 DPLQM--YLSDIFTIPVNLAGTCAISVPAGMSAAGLPIGLQLIGRPFGEETILRAAHAFE 473 Query: 482 KEAGYFR 488 + + R Sbjct: 474 QATEWHR 480 >gi|302343342|ref|YP_003807871.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfarculus baarsii DSM 2075] gi|301639955|gb|ADK85277.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfarculus baarsii DSM 2075] Length = 486 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 228/482 (47%), Positives = 320/482 (66%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++++ L ++S+VEL + ++ + + +++AYI + + A A +DK G Sbjct: 6 LTIAQASQLLAKGELSSVELTKAMLERVAATEERVHAYITLTPELALEQAANADKMRAQG 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+P G+KD T+G+ T S +L F P Y +T+ +KL G VMLGK NMDE Sbjct: 66 QAGPLTGVPAGVKDVLCTRGVATTCASRMLQNFTPPYSATLVRKLEAAGMVMLGKHNMDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S +GP +PW + PGGSSGGS+A+VA C +IGTDTGGSIRQ Sbjct: 126 FAMGSSTENSAFGPTSNPWDL-----RAVPGGSSGGSAASVAARSCFYAIGTDTGGSIRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYGR SRLG+++FA SLDQAG ITR+V D+A +L+ IAG+D D+T Sbjct: 181 PASHCGVVGLKPTYGRVSRLGLVAFASSLDQAGPITRSVADAATVLQVIAGHDPADSTSA 240 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 PVPDY AL + ++G+ +G+PKEY + + P ++ + I+ L+ GA++ ISLPH Sbjct: 241 PRPVPDYAAALRRGVKGLRLGVPKEYFVAGMDPQVEDAVRAAIATLEGLGAQVRPISLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRSIGFGQEVKHRIM 364 +Y+L YYII+PAE SSNLARYDGV+YGL R EG D+LEMY TRS GFG+EV RIM Sbjct: 301 AEYSLAVYYIIAPAECSSNLARYDGVKYGLSIRPEGADLLEMYTATRSQGFGKEVIRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ YD++Y +A ++RTL+ DF AF++ VD I+TP PT AF G+ ++ Sbjct: 361 LGTYVLSAGYYDAYYNKASQVRTLLIEDFAAAFKE-VDAIVTPVAPTPAFDKGQMTDDPM 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+FT++ N+AGLP +S+P + P+GLQL+ F EETL +VGQ ++ Sbjct: 420 QM--YLSDIFTLSCNLAGLPGMSLPCGFAQSGRPIGLQLMAPHFAEETLLAVGQAFQEAT 477 Query: 485 GY 486 + Sbjct: 478 DF 479 >gi|116493114|ref|YP_804849.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pediococcus pentosaceus ATCC 25745] gi|122265422|sp|Q03EG5|GATA_PEDPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116103264|gb|ABJ68407.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pediococcus pentosaceus ATCC 25745] Length = 486 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 226/485 (46%), Positives = 312/485 (64%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V+E +L K+++ ELV + IE +N ++ + + A A A D++ IN Sbjct: 6 ITVTELHQKLVDKELTVTELVSETLDQIEADQKVLNDFVTINREGALAQARAIDEKGINP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D GIPI IKD TKGI T A S +L F P Y++TV ++L N +++GK NMDE Sbjct: 66 D-NIWAGIPIAIKDNIVTKGIKTTAASKMLSNFTPIYDATVIERLQANDVIIIGKTNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG S ETSY+G +PW D T PGGSSGGS+ V+ A++G+DTGGSIRQ Sbjct: 125 FAMGGSTETSYFGDTRNPW---DHTK--VPGGSSGGSATTVSAGNSIAALGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+TG VG+KPTYGR SR G+I+F SLDQ G +TRTV+D+A LL IAG DE D T Sbjct: 180 PASYTGIVGVKPTYGRISRYGLIAFGSSLDQIGPMTRTVKDNAALLNIIAGMDERDLTSS 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + VPD+ + + I+GM +G+PKEY D ++ + K +Q + L + GA I EISLP Sbjct: 240 DKKVPDFTSKIGKDIKGMKIGLPKEYLGDGINEDVKKVVRQAVETLTNLGATIEEISLPR 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 ++Y + AYYII +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+ Sbjct: 300 SKYGVAAYYIIGSSEASSNLQRFDGIRYGHRAQDVKNLEDVYVKSRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD+++ +A ++RTLI DF + FE D+I+ PT PT A+ +G E ++ + Sbjct: 360 GTYSLSAGTYDAYFKKAAQVRTLIINDFNKIFED-YDLIIGPTAPTPAYAIGAEVDDPTT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M NDV T+ VN+AGLPA+SVPA + MP+GLQ+I +PF EET++ G E Sbjct: 419 M--YMNDVLTIPVNLAGLPAMSVPAGFSD-NMPVGLQIIAKPFDEETMYQAGAAFEAATE 475 Query: 486 YFRPH 490 H Sbjct: 476 VHSKH 480 >gi|261392369|emb|CAX49909.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A) [Neisseria meningitidis 8013] Length = 481 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/467 (47%), Positives = 302/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPRIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFAEAKILGAAHQIQ 470 >gi|325128454|gb|EGC51335.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis N1568] Length = 481 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 301/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +DKRI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADKRIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQ G + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQTGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|325134409|gb|EGC57054.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M13399] Length = 481 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 302/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFSDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFSEAKILGAAHQIQ 470 >gi|159027884|emb|CAO89687.1| gatA [Microcystis aeruginosa PCC 7806] Length = 483 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 232/482 (48%), Positives = 324/482 (67%), Gaps = 9/482 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + +L +K+ +AVE+ +I I+ Q+ +++ + A A A++ D++I G+ Sbjct: 3 SIRQLHQQLVNKEKTAVEIATEFIARIQAIEPQVKSFLHLTPDLALAQAQKVDEKIARGE 62 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPI +KD TKGI T S IL+ F P YESTVTQKL D GAV++GK N+DE Sbjct: 63 SLHPLAGIPIALKDNLCTKGIPTTCASRILENFVPPYESTVTQKLRDLGAVIVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYHVTANPWDL-----SRVPGGSSGGSAAAVAAQECVIALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G RTV D+AILL+AIAGYD D+T + Sbjct: 178 PASFCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFGRTVEDAAILLQAIAGYDPQDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 NLP+PDY + L S++G+ +G+ KE + L + + Q ++ LK GA I EIS P Sbjct: 238 NLPIPDYSQFLKTSLKGLKIGVIKETFGEGLDQVVAEAVNQALAQLKALGATIKEISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LP YYII+P+EAS+NLARYDGV+YG+R + +++MY TR+ GFG EVK RIM+G Sbjct: 298 FRYGLPTYYIIAPSEASANLARYDGVKYGIREDADSLIDMYTKTRAQGFGAEVKRRIMLG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK DF AF Q VDV+++PT+PT+AF G++ + SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKEDFDRAF-QSVDVLVSPTSPTTAFKAGEKTADPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ T+ VN+AGLP +S+P + +P+GLQL+G RE+ LF V E+ + Sbjct: 417 --YLSDLMTIPVNLAGLPGLSLPCGFDGQGLPIGLQLVGNVLREDQLFHVAHAYEQATDW 474 Query: 487 FR 488 + Sbjct: 475 HK 476 >gi|218782322|ref|YP_002433640.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfatibacillum alkenivorans AK-01] gi|226709593|sp|B8FCK9|GATA_DESAA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|218763706|gb|ACL06172.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfatibacillum alkenivorans AK-01] Length = 485 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 228/490 (46%), Positives = 328/490 (66%), Gaps = 11/490 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + + ++R++L SK+IS+ +L + + IE Q++AY+ V ++A AA+++DK + Sbjct: 3 LHELTIGQAREKLLSKEISSQDLTKAVLDRIEAVEPQVDAYLTVSKEEAMEAAQKADKAL 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L GIP+ IKD TKG+ T S IL F P Y++T KL + GAV++GK N Sbjct: 63 AQGETAPLCGIPLAIKDVMCTKGVLTTCASKILGNFVPPYDATSITKLKEAGAVLVGKTN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS E S + +PW D T TPGGSSGGS+AAVA +C + G+DTGGS Sbjct: 123 MDEFAMGSSTENSAFKTTKNPW---DLTR--TPGGSSGGSAAAVAADMCLGAFGSDTGGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQP S VG+KPTYGR SR G+++FA SLDQ G +TV D+AILL+A+AGYD D+ Sbjct: 178 IRQPGSHCSVVGLKPTYGRVSRYGLVAFASSLDQIGPFAKTVEDAAILLQAVAGYDPSDS 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T VN+ VPDY A+ + ++GM VG+PKEY + L+P + + Q I L+ G +++++ Sbjct: 238 TSVNVEVPDYTTAIQEDVKGMRVGMPKEYFEMGGLTPDVKNSVDQAIKTLESQGVEVMDV 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SLPH++Y + YY+I+PAEASSNLARYDGV+YG+R E +++MY TRS GFG EV+ R Sbjct: 298 SLPHSKYCVAVYYVIAPAEASSNLARYDGVKYGMREERDSLIDMYHATRSSGFGPEVQRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTY LS+ YD++Y +A ++RTLI D+ +AFE+ D I++P PT AF LG EN Sbjct: 358 IIIGTYALSAGYYDAYYGKASQVRTLIMEDYKKAFEK-CDAIISPVAPTPAFKLG--ENT 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +D+FT++ N+AG+ +SVP + +P+GLQL G F+EE + +G +K Sbjct: 415 DDPLTMYLSDIFTLSANLAGVCGVSVPCGFSSEGLPIGLQLQGSHFQEEKILRLGHHFQK 474 Query: 483 EAGYF--RPH 490 + RP+ Sbjct: 475 ATDFHTKRPN 484 >gi|304387329|ref|ZP_07369521.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis ATCC 13091] gi|304338580|gb|EFM04698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis ATCC 13091] Length = 481 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 302/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFSEAKILGAAHQIQ 470 >gi|254670551|emb|CBA06398.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria meningitidis alpha153] Length = 481 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 301/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQ G + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQTGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFAEAKILGAAHQIQ 470 >gi|269119792|ref|YP_003307969.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Sebaldella termitidis ATCC 33386] gi|268613670|gb|ACZ08038.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sebaldella termitidis ATCC 33386] Length = 479 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 228/483 (47%), Positives = 319/483 (66%), Gaps = 12/483 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ ++ E +++++ DI++ E+ ++ I + + + A++ V ++KA A E ++ Sbjct: 2 KLHELSAVELSEKIKNSDITSEEVTKIFLDRINSIDEKTGAFVSVNSEKALKEAREYGEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++ L G+PI IKD + G T + S ILD + Y+STV +K+ ++ +LGK Sbjct: 62 ---ENSSPLHGVPIAIKDNILSIGDLTTSASKILDNYIGIYDSTVVKKIKESCMPILGKT 118 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S PV + W TD+ PGGSSGGS+ AVA ++GTDTGG Sbjct: 119 NMDEFAMGSSNENSGIKPVSNVW----DTDR-VPGGSSGGSATAVAAGEAPVALGTDTGG 173 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA+ +G VGIKPTYGR SR G+++F SLDQ G+ ++TVRD+A LK IAGYDE D Sbjct: 174 SVRQPAALSGVVGIKPTYGRVSRYGLMAFGSSLDQIGVFSKTVRDAAETLKIIAGYDEMD 233 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++PV +Y L+ I+G+ +GIPKEY + L I K I+ LK+ GA+I EI Sbjct: 234 STSADVPVDNYTEYLNGDIKGLKIGIPKEYFAESLDSEIKKVIDNSINMLKEQGAEIREI 293 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SLPHT+YA+P YYII+ AEA+SNLARYDGVRYG R + I +MY +R+ G G+EVK R Sbjct: 294 SLPHTKYAVPTYYIIACAEAASNLARYDGVRYGYRGDNSSIEDMYVKSRTQGLGKEVKRR 353 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G YVLSS YD++Y +A ++R LIK DF +A E+ VDVILTPT+P P K E Sbjct: 354 IMLGNYVLSSGFYDAYYKKASQVRRLIKNDFDKALEE-VDVILTPTSPV--LPFKKGEKM 410 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D++TV++N+AGLP ISVPA + +P+GLQ+IG+ F E TLF V EK Sbjct: 411 EDPVQMYLADIYTVSINLAGLPGISVPAGFVD-GLPVGLQIIGKFFDEATLFRVSDKFEK 469 Query: 483 EAG 485 G Sbjct: 470 IRG 472 >gi|261400354|ref|ZP_05986479.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria lactamica ATCC 23970] gi|269209989|gb|EEZ76444.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria lactamica ATCC 23970] Length = 481 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 301/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL + Y+ AI N +N YI + +K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELANEYLAAIAEKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + Y R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEGYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVQTALQNTIDLLKTQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFAEAKILGAAHQIQ 470 >gi|166363936|ref|YP_001656209.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Microcystis aeruginosa NIES-843] gi|189045253|sp|B0JSX3|GATA_MICAN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166086309|dbj|BAG01017.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis aeruginosa NIES-843] Length = 483 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/482 (47%), Positives = 324/482 (67%), Gaps = 9/482 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + +L +K+ +AVE+ ++ I+ Q+ +++ + A A A++ D++I G+ Sbjct: 3 SIRQLHQQLVNKEKTAVEIATEFLARIQALEPQVKSFLHLTPDLALAQAQKVDEKIARGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPI +KD TKGI T S IL+ F P YESTVTQKL D GAV++GK N+DE Sbjct: 63 SLHLLAGIPIALKDNLCTKGIPTTCASRILENFVPPYESTVTQKLRDLGAVIVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYHVTANPWDL-----SRVPGGSSGGSAAAVAAQECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G RTV D+AILL+AIAGYD D+T + Sbjct: 178 PASFCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFGRTVEDAAILLQAIAGYDPQDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 NLP+PDY + L S++G+ +G+ KE + L + + Q ++ LK GA I EIS P Sbjct: 238 NLPIPDYSQFLKTSLKGLKIGVIKETFGEGLDQVVAEAVNQALAQLKALGATIKEISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LP YYII+P+EAS+NLARYDGV+YG+R + +++MY TR+ GFG EVK RIM+G Sbjct: 298 FRYGLPTYYIIAPSEASANLARYDGVKYGIREDADSLIDMYTKTRAKGFGAEVKRRIMLG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK DF AF Q VDV+++PT+PT+AF G++ + SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKEDFDRAF-QSVDVLVSPTSPTTAFKAGEKTADPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ T+ VN+AGLP +S+P + +P+GLQL+G RE+ LF V E+ + Sbjct: 417 --YLSDLMTIPVNLAGLPGLSLPCGFDGQGLPIGLQLVGNVLREDQLFHVAHAYEQATDW 474 Query: 487 FR 488 + Sbjct: 475 HK 476 >gi|298244963|ref|ZP_06968769.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ktedonobacter racemifer DSM 44963] gi|297552444|gb|EFH86309.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ktedonobacter racemifer DSM 44963] Length = 486 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 226/495 (45%), Positives = 322/495 (65%), Gaps = 15/495 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ + + E+ + LR + +S+VEL ++++ I + ++ A+ V A AEE+D Sbjct: 1 MTDLHTLTIHEAAELLRQRKLSSVELTKAHLERIRAVDDRVKAFTLVTDDLALKQAEEAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR+ +G+ L GIP+ IKD TKGI T S +L+ F+P +++TV +KL GAVML Sbjct: 61 KRLASGENLSPLTGIPLAIKDVICTKGITTTCGSRMLENFKPPFDATVMEKLNATGAVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S + P +PW +D PGGSSGGS+A VA + S G+D Sbjct: 121 GKTNMDEFAMGSSTEHSAFFPTHNPW-DLDRA----PGGSSGGSAAVVAAGMAMGSYGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + +G+KPTYGR SR G+++FA SLDQ G R +D+A LL+A+AG+D Sbjct: 176 TGGSIRQPGALCNILGLKPTYGRVSRYGLVAFASSLDQIGPFARDAQDAATLLQAVAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D+T V +Y +AL +I+GM +G+PKEY ++ + P ++K I L+D GA+I Sbjct: 236 QRDSTSSTQEVANYSQALTGNIKGMRIGVPKEYWVEGMDPGVEKVVHSAIEALRDLGAEI 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 V++SLPHT+Y L AYYI++PAEAS+NLARYDGV+YG + D+ E E TR GFG E Sbjct: 296 VDVSLPHTKYGLAAYYIVAPAEASANLARYDGVKYGYSYRDTDDMWEAMEKTRQNGFGAE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTY LS+ YD++Y +A K+R LIKRDF EAF Q VD +++P +PT AF LG+ Sbjct: 356 VKRRIMLGTYALSAGYYDAYYKQAEKVRALIKRDFDEAFAQ-VDALVSPASPTVAFKLGE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S D+FT+ N+AG+ IS+P E +P+G+QL+G F+E + + Sbjct: 415 ---ISDPYQMYLQDMFTIPANLAGICGISIPGGFSE-NLPVGVQLLGNTFQEAAILRIAD 470 Query: 479 IIEKEAGYFRPHKWW 493 E+ + HK W Sbjct: 471 AFERVTDH---HKQW 482 >gi|332637421|ref|ZP_08416284.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Weissella cibaria KACC 11862] Length = 485 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 226/477 (47%), Positives = 312/477 (65%), Gaps = 11/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++L +K+I+AVEL ++ + I ++ A+I V+ +A A A+ D+ I+ D L Sbjct: 12 HEQLVNKEITAVELAEATLSNIAATDDTYEAFITVMKDEALAEAKAIDEAGIDPD-NILS 70 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP GIKD TKG+ T A S IL F+P Y++TV +KL NGAV +GKLNMDEFAMGS+ Sbjct: 71 GIPYGIKDNLVTKGVTTTAASKILQNFKPIYDATVIEKLRANGAVGVGKLNMDEFAMGST 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +ETSYY + W D T PGGSSGGS+ AVA ++GTDTGGSIRQPA+F G Sbjct: 131 SETSYYRKTKNAW---DQTK--VPGGSSGGSAVAVAAGQVPFALGTDTGGSIRQPAAFNG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+I+FA SLDQ G+ TRTV+D+A +L A+AG DE D T ++ VPD Sbjct: 186 IVGMKPTYGRVSRWGVIAFASSLDQVGVFTRTVKDNARVLSAMAGQDEKDQTSSDIAVPD 245 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L I+G+ + +P EY ++ + T + GI+ L++ GA++ E+SLPHT+Y + Sbjct: 246 FTANLTGDIKGLKIAVPTEYFGAGINADVKATIKAGIAKLQELGAEVEEVSLPHTKYGVA 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYI+ AEASSNL R+DG+RYG R EG K++ ++Y TRS GFG EVK RIM+GTY LS Sbjct: 306 AYYILGSAEASSNLQRFDGIRYGFRPEGVKNLDDLYVQTRSQGFGDEVKRRIMLGTYSLS 365 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A ++RTL+ DF F + D+I+ PTTP A+ G E++ N Sbjct: 366 AGTYDAFFKKAAQVRTLMNEDFQNVFAK-YDLIIAPTTPNVAYNFGANEDDPEVT--YMN 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 DV T+ VNMAGLP +SVPA +P+G+Q I F+EET++ E+ F Sbjct: 423 DVLTIPVNMAGLPGMSVPAGFV-NGLPVGMQFIANRFQEETIYRAAYAYEQATRLFE 478 >gi|325144510|gb|EGC66809.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M01-240013] Length = 481 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 302/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|325142536|gb|EGC64936.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis 961-5945] gi|325198500|gb|ADY93956.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis G2136] Length = 481 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 301/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|15677221|ref|NP_274374.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis MC58] gi|24211724|sp|Q9JYZ9|GATA_NEIMB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|7226601|gb|AAF41730.1| Glu-tRNA(Gln) amidotransferase, subunit A [Neisseria meningitidis MC58] gi|316984162|gb|EFV63140.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Neisseria meningitidis H44/76] gi|325140425|gb|EGC62946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis CU385] gi|325200024|gb|ADY95479.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis H44/76] Length = 481 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 301/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQ G + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQTGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEAS+NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEASTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|325288909|ref|YP_004265090.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Syntrophobotulus glycolicus DSM 8271] gi|324964310|gb|ADY55089.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Syntrophobotulus glycolicus DSM 8271] Length = 488 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/489 (48%), Positives = 331/489 (67%), Gaps = 19/489 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + EL+ M V ++IS+ EL + +++ + + + + A+++V + A A AEE+D Sbjct: 8 LDELHLMLVK--------REISSKELTERFLKRVCSVEAGVQAFLQVNREDALARAEEAD 59 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++I G + LEGIP+ +KD T GI T S IL+ F P Y + VT++L GAV++ Sbjct: 60 QKIAAGAEIGILEGIPMALKDNLCTAGIKTTCGSKILENFVPPYNAEVTERLAKAGAVLI 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSSNE S + PV +PW + PGGSSGGS+AAVA A S+G+D Sbjct: 120 GKLNMDEFAMGSSNENSGFYPVKNPWDL-----ERVPGGSSGGSAAAVAAREVAYSLGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYG SR G+++FA SLDQ G +T+TVRD+A +L IAG+D Sbjct: 175 TGGSIRQPASFCGVVGLKPTYGAVSRFGLVAFASSLDQIGPLTKTVRDNAHVLNVIAGHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V PDY + S+QG+ +G+PKE+ L+P +++ ++ +S + GA+I Sbjct: 235 PKDSTSVPYSKPDYTGFMINSVQGLRIGVPKEFFAQGLNPEVEQVIRKALSTYEKMGAEI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E SLPH +YALP YYII+ AEASSNLARYDGV+YG R E +D++EMY+ TR+ GFG+EV Sbjct: 295 GECSLPHMEYALPVYYIIATAEASSNLARYDGVKYGFRAEAEDMIEMYKRTRAQGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTY LSS YD++YL+A+K+RTLI++DF + FE DVI++PT PT A+ LG+ Sbjct: 355 KRRIMLGTYALSSGYYDAYYLKAQKVRTLIRQDFAKIFED-FDVIISPTAPTVAYKLGE- 412 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S + DV+T+ VN+AGLP+ISVPA +P+GLQ+IG+ F E L+ Sbjct: 413 --RSDPLAMYMGDVYTIPVNLAGLPSISVPAGFA-GGLPVGLQIIGRHFDEGRLYQAAYA 469 Query: 480 IEKEAGYFR 488 E+ + + Sbjct: 470 FEQSTDFHK 478 >gi|125973547|ref|YP_001037457.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Clostridium thermocellum ATCC 27405] gi|256003365|ref|ZP_05428356.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum DSM 2360] gi|281417751|ref|ZP_06248771.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum JW20] gi|125713772|gb|ABN52264.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Clostridium thermocellum ATCC 27405] gi|255992655|gb|EEU02746.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum DSM 2360] gi|281409153|gb|EFB39411.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum JW20] gi|316940212|gb|ADU74246.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum DSM 1313] Length = 486 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 232/488 (47%), Positives = 326/488 (66%), Gaps = 10/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + V E D ++++ +SAVELV S + I + ++ +YI V+ ++A A+E +R Sbjct: 2 ELYELTVHEMSDFIKNRKVSAVELVQSVLDRINAIDEKIGSYITVLEEEALEQAKEVQER 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+A+ L GIP+ +KD TK + T S +L F P Y++TV++KL++ GAV+LGK Sbjct: 62 IDKGEAKSPLAGIPMALKDNICTKNVKTTCASKMLGSFIPPYDATVSKKLYNEGAVLLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG+S E SY+ +PW + PGGSSGGS+AAVA + ++G+DTG Sbjct: 122 LNMDEFAMGASTENSYFKITRNPWDL-----ERVPGGSSGGSAAAVAAGMAGFALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYG SR G+++FA S+DQ G +T+ V D A++L AI GYD Sbjct: 177 GSIRQPASFCGIVGMKPTYGAVSRFGLVAFASSMDQIGPLTKDVTDCAMVLNAITGYDPM 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T ++ PDY +AL ++G+ +GIPKEY D + + K LK+ GA++ E Sbjct: 237 DSTSADVKYPDYSKALINDVKGIRIGIPKEYIGDNTNLDVKKAVLDAAKTLKELGAQVAE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 SLP T+YA+PAYYIIS AEASSNLARYDG++YG R E D++++Y TRS GFG EVK Sbjct: 297 CSLPLTEYAIPAYYIISSAEASSNLARYDGIKYGYRAKEYTDLMDLYVRTRSEGFGVEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY LSS YD +Y +A ++RTLIK F E FE+ DV+L P PT+AF +G+++ Sbjct: 357 RRILLGTYALSSGYYDQYYKKALQVRTLIKNAFNEVFEK-YDVLLGPAAPTTAFKIGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 M D++TV+VN+AGLPA+++P +P+GLQLIG+PF E TL VG Sbjct: 416 EKPLEM--YLGDIYTVSVNIAGLPALTIPCGFDGNNLPIGLQLIGKPFDESTLLRVGYTF 473 Query: 481 EKEAGYFR 488 E+ + + Sbjct: 474 EQNTEFHK 481 >gi|223938913|ref|ZP_03630800.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [bacterium Ellin514] gi|223892466|gb|EEF58940.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [bacterium Ellin514] Length = 488 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/489 (48%), Positives = 331/489 (67%), Gaps = 12/489 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + +SE D+L K+ SA E V + + I+ + Q++A++ A A AE +DK + Sbjct: 2 LNQLTISELTDKLAKKEASAKETVQACLDQIQKVDGQIHAFLSYDVADALAQAEAADKAL 61 Query: 64 INGDA---RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G+ R L G+PI IKD A K S IL F Y++T +KL GAV+ G Sbjct: 62 AAGETHVQRPLLGVPIAIKDVLAVKNHPLNCASKILGKFTSVYDATAIEKLKAAGAVVFG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 +LNMDEFAMGSS E S +G +PW D+T PGGSSGGS+A+VA C AS+GTDT Sbjct: 122 RLNMDEFAMGSSTENSAFGVTRNPW---DTTR--IPGGSSGGSAASVAADECIASLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ G VG+KPTYGR SR G+++FA SLDQ G T+ VRDSA LL+ ++G D Sbjct: 177 GGSIRQPAALCGCVGLKPTYGRISRYGLVAFASSLDQIGPFTKDVRDSATLLEVMSGIDH 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V PVP Y AL+ +I+G+ +G+PKEY + L P ++ Q + L+ GA++V Sbjct: 237 RDSTSVPQPVPHYHTALNGNIKGLKIGLPKEYMIGGLDPQVNAAVQAAVQQLQKLGAEVV 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT YA+ YYII+ AEAS+NLAR+DG+RYG R++GKD +E+Y TR GFG EVK Sbjct: 297 EISLPHTDYAVATYYIIATAEASANLARFDGIRYGARIDGKDPIELYSKTRGAGFGPEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLSS YD++YLRA+K+RTLI++DF +AFE+ VD I+TPTTPT+AF +G++ Sbjct: 357 RRIILGTYVLSSGYYDAYYLRAQKVRTLIRQDFLKAFEK-VDAIVTPTTPTAAFKIGEKS 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSVGQI 479 ++ M +D+FT++ N+AG+ +S+P K+P+GLQL+G+PF EET+ + Sbjct: 416 DDPLQM--YLSDIFTISCNLAGICGLSLPCGFTTSPKLPIGLQLLGKPFGEETILKIAHA 473 Query: 480 IEKEAGYFR 488 E+ + + Sbjct: 474 YEQSTSWHK 482 >gi|88810576|ref|ZP_01125833.1| glutamyl-tRNA amidotransferase subunit A [Nitrococcus mobilis Nb-231] gi|88792206|gb|EAR23316.1| glutamyl-tRNA amidotransferase subunit A [Nitrococcus mobilis Nb-231] Length = 484 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/469 (51%), Positives = 326/469 (69%), Gaps = 10/469 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LRS + +++EL + ++ I +S++NA+I V ++A AAA+ +D G L GIP Sbjct: 13 LRSGEFTSIELTRACLERIRRLDSKLNAFITVSEEQALAAAQAADSARAVGQGGALTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T+G+ T S +LD F Y++ V ++L GAVM+GK NMDEFAMGSSNET Sbjct: 73 IAHKDIFCTRGVKTTCGSRMLDNFIAPYDAHVVERLKAAGAVMVGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S++GPV +PW D PGGSSGGS+AAVA L A+ GTDTGGSIRQPA+ G G Sbjct: 133 SFFGPVRNPW-----VDTAVPGGSSGGSAAAVAARLVPAATGTDTGGSIRQPAALCGISG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+FA SLDQ G + RTV D A L++A+AG+D D+TCV PVP Y Sbjct: 188 LKPTYGRVSRYGMIAFASSLDQGGPMARTVEDLAWLIEAMAGFDPRDSTCVERPVPRYAA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 +D + G+T+G+PKEY + LSP + Q I L GA+I EISLP+++ A+P YY Sbjct: 248 GIDAPLTGLTIGLPKEYFGEGLSPAVGDLIQAAIDVLHRLGAQIKEISLPNSRLAVPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+RYDG RYG R + +D+ +MYE TRS GFG EVK RIM+GTYVLS+ Sbjct: 308 VIAPAEASSNLSRYDGARYGYRCSQPRDLEDMYERTRSEGFGAEVKRRIMVGTYVLSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+++R +I+ DF AFE+ VDVI+ PT PT+AF LG++ ++ M +D++ Sbjct: 368 YDAYYLKAQQVRRMIRDDFIRAFEE-VDVIMGPTAPTAAFDLGEKTSDPVQM--YLSDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 T+AVN+AGLPA+S+P + P+GLQLIG F EE L +VG ++E Sbjct: 425 TIAVNLAGLPALSIPTGFAAGR-PVGLQLIGNFFAEERLLNVGHRYQQE 472 >gi|323490407|ref|ZP_08095619.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Planococcus donghaensis MPA1U2] gi|323395906|gb|EGA88740.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Planococcus donghaensis MPA1U2] Length = 489 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/486 (48%), Positives = 327/486 (67%), Gaps = 13/486 (2%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 ++ ++ + +K+ + E+ + + IE +++A++ + ++A A+E D+ + + Sbjct: 9 AQLQEMIHTKETTIAEMTEKAFERIEALEPKVDAFLALNKERATQLAKEMDQ-VPFAERG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PIG+KD T+G+ T A S IL+GF P Y +TV KL + G V +GKLNMDEFAM Sbjct: 68 PLFGLPIGVKDNIVTEGLETTASSRILEGFNPIYNATVVDKLREAGMVTVGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSSNE SYY +PW + PGGSSGGS+AAVA S+G+DTGGSIRQPA+ Sbjct: 128 GSSNENSYYKKTKNPWNL-----ETVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYGR SR G+I++A SLDQ G ITRTV D+A+LL AI+GYDE D+T N+ Sbjct: 183 FCGVVGMKPTYGRVSRFGLIAYASSLDQIGPITRTVNDNALLLNAISGYDEKDSTSANVE 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VPD+ AL I G+ +G+PKEY + + + + L++ GA EISLPH++Y Sbjct: 243 VPDFTSALTGDITGLRIGVPKEYFAEGVGEAAKEAVLDALKVLEERGAICEEISLPHSKY 302 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTY 368 AL YYI++ +EASSNL+R+DG+RYG R E +LE Y NTRS GFG EVK RIM+GTY Sbjct: 303 ALSTYYILASSEASSNLSRFDGIRYGYRTEKAGSLLEFYMNTRSEGFGDEVKRRIMLGTY 362 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS YD++Y +A+K+RTLIK+DF +AFE+ DVI+ PTTPT AF +G+ ++ +M Sbjct: 363 ALSSGYYDAYYKKAQKVRTLIKKDFDDAFEK-YDVIVGPTTPTPAFKIGEIMDDPLTM-- 419 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ND+ T+ VN+AG+PAIS+P E +PLGLQ+IG+ F EET++ V + EK + + Sbjct: 420 YANDILTIPVNLAGVPAISIPCGF-ENGLPLGLQIIGKHFDEETVYRVADVYEKATDFHK 478 Query: 489 --PHKW 492 P W Sbjct: 479 KTPQTW 484 >gi|254805149|ref|YP_003083370.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria meningitidis alpha14] gi|254668691|emb|CBA06430.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria meningitidis alpha14] Length = 481 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 300/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL + Y+ AI N +N YI + +K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELANEYLAAIAEKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDESMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+ VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNP-----EHVPGGSSGGSAVVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGLKIGLPKEYFGEGNSADVQTALQNTIDLLKTQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFSEARILGAAHQIQ 470 >gi|94967532|ref|YP_589580.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Koribacter versatilis Ellin345] gi|166217639|sp|Q1IUE4|GATA_ACIBL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|94549582|gb|ABF39506.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Koribacter versatilis Ellin345] Length = 480 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 225/482 (46%), Positives = 316/482 (65%), Gaps = 12/482 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++N + + +R ++ + +A + +S+ + IE + ++NAY+ + +A A A + D Sbjct: 2 DINVLTIDATRIAIQERQATATAIAESFYKKIEAEDGEINAYLTLSRDRALAQAAKIDAI 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 GD L G+P+ IKD +TKG+ T A S IL+ F Y++TV QKL GAV+LGK Sbjct: 62 ADRGDDLPRLAGLPVAIKDVISTKGVRTTAGSKILEEFIAPYDATVVQKLEAAGAVILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDT 180 N DEFAMGSSNE S YGPV +P DK PGGSSGGS+A VA S+G+DT Sbjct: 122 TNCDEFAMGSSNENSAYGPVRNPR------DKSRVPGGSSGGSAAVVAAGTAVTSLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G VG+ PTYGR SR G+I+FA SLD G + V+D+AI+L+ IAG D Sbjct: 176 GGSIRQPASFCGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVKDAAIMLEVIAGRDP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DAT + VP Y + + ++GM +G+ KEY + L P + + + I L AGA+I+ Sbjct: 236 MDATSAEVAVPKYSDEIGKPVRGMKIGVAKEYFGEGLDPEVKASVEASIQNLAKAGAEII 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+SLPHT+YA+P YY+++ AEASSNLAR+DGVRY R E K + EMY +R GFG EV Sbjct: 296 EVSLPHTKYAIPTYYLVATAEASSNLARFDGVRYSHRSKEAKTLSEMYRKSRDEGFGAEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GTY LS+ YD++YL+A+K+RTL+ +DF EAF + VD I+TPTTPT AF LG++ Sbjct: 356 KRRIILGTYALSAGYYDAYYLKAQKVRTLLAQDFDEAFAK-VDAIVTPTTPTPAFKLGEK 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ +M D+FTV ++ G+P ISVP + +P+GLQ+ + F+E T+ V Sbjct: 415 ADDPLAM--YLADIFTVTADLVGIPGISVPCGSSKDGLPIGLQVFAKHFQEATMIRVAHA 472 Query: 480 IE 481 +E Sbjct: 473 VE 474 >gi|240016436|ref|ZP_04722976.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae FA6140] gi|240113075|ref|ZP_04727565.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae MS11] gi|240115831|ref|ZP_04729893.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae PID18] gi|240128378|ref|ZP_04741039.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae SK-93-1035] gi|268599161|ref|ZP_06133328.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae MS11] gi|268601507|ref|ZP_06135674.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae PID18] gi|268686776|ref|ZP_06153638.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae SK-93-1035] gi|293398951|ref|ZP_06643116.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae F62] gi|268583292|gb|EEZ47968.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae MS11] gi|268585638|gb|EEZ50314.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae PID18] gi|268627060|gb|EEZ59460.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae SK-93-1035] gi|291610365|gb|EFF39475.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae F62] Length = 481 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 300/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSFEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---TSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|72382104|ref|YP_291459.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. NATL2A] gi|109891969|sp|Q46L72|GATA_PROMT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|72001954|gb|AAZ57756.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Prochlorococcus marinus str. NATL2A] Length = 486 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/485 (48%), Positives = 321/485 (66%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R +L+S ++S+ ELV I I + +N+++ V + A + AE DK+I +G Sbjct: 1 MTFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHIDKQIASG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIPI IKD TKGI T S ILD F P YESTVT+KL + GA+M+GK NMD Sbjct: 61 DHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +GP ++PW PGGSSGGS+A+VA LC S+G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGPTLNPWNITK-----VPGGSSGGSAASVAAGLCYGSLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+I+FA SLDQ G V D+A +L+ I+G DE D+T Sbjct: 176 QPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTT 235 Query: 246 VNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 V++PVP+Y L +SI+GM +G I + + L+ + ++ S L++ GA+IV IS Sbjct: 236 VDIPVPNYLETLSKSIKGMKIGLIDNCFDHEGLATDVKESVLSSASLLENLGAEIVNISC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + ++EM +R++GFG EVK RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAEDEQSLIEMTSKSRALGFGSEVKRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF +AF++ VDV+L PT PT+AF G +N Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDDAFKK-VDVLLAPTAPTTAF--GSGDNID 412 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 M +D+ T+ N+AGLPAIS+P + +P+GLQLIG F E LF V EK Sbjct: 413 NPMAMYLSDLLTIPANLAGLPAISLPCGFDKYGLPIGLQLIGNVFEEGKLFQVANQFEKA 472 Query: 484 AGYFR 488 A ++ Sbjct: 473 AEVYK 477 >gi|121635062|ref|YP_975307.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis FAM18] gi|166217690|sp|A1KUH8|GATA_NEIMF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|120866768|emb|CAM10521.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis FAM18] gi|325132451|gb|EGC55144.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis M6190] gi|325138225|gb|EGC60794.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis ES14902] Length = 481 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 300/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL AI G+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAITGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA+++E+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGVKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|219848367|ref|YP_002462800.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chloroflexus aggregans DSM 9485] gi|259647207|sp|B8G974|GATA_CHLAD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219542626|gb|ACL24364.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chloroflexus aggregans DSM 9485] Length = 488 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/483 (48%), Positives = 328/483 (67%), Gaps = 10/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+++ VS + L + +++AVEL ++ + I + Q+ A++ + + A AAA +D Sbjct: 1 MTELHYLTVSAAHTALAAGELTAVELTEACLARINATEPQIRAFLHLTPEAALAAARAAD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G A L+GIPIGIKD T G+ T A S IL GFRP Y +TV ++L G V++ Sbjct: 61 ERRRRGQALSPLDGIPIGIKDVICTNGVPTTAGSRILAGFRPPYNATVIERLLAAGTVLI 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN DEFAMGSS E S Y +PW + PGGSSGGS+AAVA A++GTD Sbjct: 121 GKLNCDEFAMGSSTENSAYQITTNPWDT-----SRVPGGSSGGSAAAVAAGQVPATLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G G+KPTYGR SR G+I++ SLDQ G + TV D A+++ IAG+D Sbjct: 176 TGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLALIMNVIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T LP PDY AL I+G+ +GIP+EY ++ + P ++ + I L++ GA + Sbjct: 236 PRDGTSAPLPTPDYTAALTGDIRGLRIGIPREYFVEGMEPGVEAATRTAIEVLREQGATL 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE+SLPHT+YALP YYII+PAEAS+NLAR+DGVRYG R EG+ + E E TR GFG EV Sbjct: 296 VEVSLPHTKYALPTYYIIAPAEASANLARFDGVRYGFRAEGETMWEQIEQTRGQGFGPEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIM+GTY LS+ YD++Y RA+++RTLIKRDF + F + VD++ TPT+PT AFP+G++ Sbjct: 356 RRRIMLGTYALSAGYYDAYYRRAQQVRTLIKRDFDQVFNE-VDLLATPTSPTVAFPIGQK 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +DV T+ +N+AG+PA+ VP + +P+GLQLIG+PF E TL VG Sbjct: 415 INDPLAM--YLSDVCTLPINLAGVPALVVPCGFSD-GLPVGLQLIGRPFDEATLLRVGDA 471 Query: 480 IEK 482 ++ Sbjct: 472 YQR 474 >gi|172036625|ref|YP_001803126.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. ATCC 51142] gi|226779776|sp|B1WYP3|GATA_CYAA5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|171698079|gb|ACB51060.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Cyanothece sp. ATCC 51142] Length = 482 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/476 (49%), Positives = 319/476 (67%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 ++ E +L +K+ SAVE+ ++ I +S++ ++++V A A A++ D++I N Sbjct: 3 SIRELHQQLVNKERSAVEITTEALERINAVDSKVKSFLQVTADHALETAKKVDEKIAKNE 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPIGIKD T GI T S IL F P YESTVTQKL D GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNMCTTGIKTTCGSKILANFVPPYESTVTQKLKDAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW SSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYQVTANPWDLSRVPGG-----SSGGSAAAVAASECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYG SR G++++A SLDQ G R V+D+AILL AIAGYD D+T + Sbjct: 178 PASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARNVQDAAILLGAIAGYDPKDSTSI 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PVPDY + L S++G+T+G+ +E + L P + KT + I LK GAK+V +S P Sbjct: 238 NTPVPDYTQFLKPSLEGLTIGVIEETFGEGLDPVVSKTVKAAIDHLKTLGAKVVNVSCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EASSNLARYD V+YG+R + +++MY TR++GFG EVK RIMIG Sbjct: 298 FRYGLPAYYIIAPSEASSNLARYDAVKYGIREDADTLIDMYTKTRAVGFGNEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF FE+ VDV++ PT+PT+AF G++ ++ SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKQDFDAGFEK-VDVLVCPTSPTTAFKAGEKTSDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ T+ VN+AGLP +S+P + +P+GLQLIG E LF V E+ Sbjct: 417 --YLSDLTTIPVNLAGLPGMSIPCGFDDNNLPVGLQLIGNVLEEGKLFQVAYAYEQ 470 >gi|126657866|ref|ZP_01729019.1| glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. CCY0110] gi|126620806|gb|EAZ91522.1| glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. CCY0110] Length = 482 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/476 (49%), Positives = 317/476 (66%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 ++ E +L +K+ SAVE+ ++ I +S++ ++++V A A A++ D++I N Sbjct: 3 SIRELHQQLVNKERSAVEITIEALERINAVDSKVKSFLQVTADHALETAKKVDEKIAKNE 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPIGIKD T GI T S IL F P YESTVTQKL D GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNLCTTGIKTTCGSKILANFVPPYESTVTQKLKDAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW SSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYHVTANPWDLSRVPGG-----SSGGSAAAVAASECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYG SR G++++A SLDQ G R V D+AILL AIAGYD D+T + Sbjct: 178 PASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARNVEDAAILLGAIAGYDSKDSTSI 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N P+PDY + L S+ G+T+G+ +E + L P + KT + I LK GAK+V +S P Sbjct: 238 NTPIPDYTQFLKPSLDGLTIGVIEETFGEGLDPVVSKTVKAAIDHLKTLGAKVVNVSCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EASSNLARYD V+YG+R E +++MY TR++GFG EVK RIMIG Sbjct: 298 FRYGLPAYYIIAPSEASSNLARYDAVKYGIREEADTLIDMYTKTRAVGFGNEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF FE+ VDV++ PT+PT+AF G++ ++ SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKQDFDAGFEK-VDVLVCPTSPTTAFKAGEKTSDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ T+ VN+AGLP +S+P + +P+GLQLIG E LF V E+ Sbjct: 417 --YLSDLTTIPVNLAGLPGMSIPCGFDDNNLPIGLQLIGNVLEEGKLFQVAYAYEQ 470 >gi|59801089|ref|YP_207801.1| putative Glu-tRNA(Gln) amidotransferase subunit [Neisseria gonorrhoeae FA 1090] gi|75432518|sp|Q5F8U8|GATA_NEIG1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|59717984|gb|AAW89389.1| putative Glu-tRNA(Gln) amidotransferase subunit [Neisseria gonorrhoeae FA 1090] Length = 481 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 300/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFIFPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSFEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---TSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|153007175|ref|YP_001381500.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaeromyxobacter sp. Fw109-5] gi|152030748|gb|ABS28516.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaeromyxobacter sp. Fw109-5] Length = 490 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/487 (49%), Positives = 335/487 (68%), Gaps = 11/487 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++++E+ + L + S+ ELV++ + IE ++ ++ A++ Q+ARAAA E+D Sbjct: 5 AELTSLSLAEAGELLAAGRGSSRELVEAALARIEATDGRVGAFLRTTPQRARAAAAEADA 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+ R L+G+PI +KD F TKG+ T A S +L+GF P Y++TV ++L GAV++G Sbjct: 65 RAAKGERRSPLDGVPIALKDIFLTKGVETTAASRVLEGFVPPYDATVVERLERAGAVLVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNE S +GP +P+ TPGGSSGGS+AAVA ++GTDT Sbjct: 125 KLNMDEFAMGSSNENSAFGPCHNPYDLAR-----TPGGSSGGSAAAVAARQVHGTLGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+F G VG+KPTYGR SR G+I+FA SLDQ G + RTVRD A LL+ IAG+D Sbjct: 180 GGSVRLPAAFCGVVGLKPTYGRVSRYGVIAFASSLDQVGPLGRTVRDVAQLLQVIAGHDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + PV DY L+ +G+ VG+P+E+ L+P +++ ++ ++ + GA +V Sbjct: 240 RDMTSSSRPVDDYLGGLEGGARGLRVGVPREWLAGGLAPGVERAVREALATYERLGATLV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+SLPHT+Y + AYY+I+PAEASSNLARYDGVR+GLR E + + +MY +TR GFG E Sbjct: 300 EVSLPHTRYGIAAYYLIAPAEASSNLARYDGVRFGLRADEARGLKDMYADTRERGFGAEP 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTY LS+ YD++YLRA+K+RTL++RDF EAF + DV+ P PT AF LG Sbjct: 360 KRRIMLGTYALSAGYYDAYYLRAQKVRTLVRRDFDEAF-RSCDVVAGPVAPTVAFRLG-- 416 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQ 478 E + + DVFT+ N+A LP +SVP L E MP+GLQL+G+PF E TL + Sbjct: 417 EKTADPLQMYLADVFTITANLAALPGLSVPCGLERESGMPVGLQLVGRPFDEATLLRAAR 476 Query: 479 IIEKEAG 485 +E+EAG Sbjct: 477 ALEREAG 483 >gi|89896632|ref|YP_520119.1| hypothetical protein DSY3886 [Desulfitobacterium hafniense Y51] gi|219667572|ref|YP_002458007.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfitobacterium hafniense DCB-2] gi|89336080|dbj|BAE85675.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537832|gb|ACL19571.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfitobacterium hafniense DCB-2] Length = 491 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/482 (48%), Positives = 327/482 (67%), Gaps = 11/482 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + + E + L K +SA EL ++ IE + + A+I V Q+A A A+ D++ Sbjct: 2 EMTALTIGELHELLAGKTLSATELTQGFLDRIEAVDPDIRAFITVTKQEALAQAKAVDEK 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ LEGIP+ +KD T+GI T S IL+ F P Y++TV +KL D+GAV+LGK Sbjct: 62 LGRGEKLGMLEGIPMALKDNLCTEGIRTTCSSKILENFIPPYQATVAEKLHDSGAVLLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS A+VA ++G+DTG Sbjct: 122 LNMDEFAMGSSTENSGFFATRNPWDP-----ERVPGGSSGGSVASVAADQAVYALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G+I++A SLDQ G +T+TVRD+A++L AIAG+D Sbjct: 177 GSIRQPAAFCGVVGLKPTYGVVSRYGLIAYASSLDQIGPVTKTVRDNALVLNAIAGHDAK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T PDY + L + I+G+ +G+PKEY L P ++ Q+ + + GA + E Sbjct: 237 DSTSAVFEKPDYTQFLTEDIRGLRIGVPKEYFGQGLDPHVEGVLQEALRTYESLGAIVEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLPHT+YA+PAYY+I+ AEASSNLARYDGVRYG R EG +D++ M+ TR+ GFG EVK Sbjct: 297 CSLPHTEYAMPAYYLIATAEASSNLARYDGVRYGRRAEGAEDVIGMFCQTRAEGFGPEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A+K+RTLI RDF EA + DV+L+PTTPT+AF +G++ Sbjct: 357 RRIMLGTYALSAGYYDAYYLKAQKVRTLIVRDFEEALAK-FDVLLSPTTPTTAFRIGEKS 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + +M +DV TV +N+AG+PA+S+PA + +P+G+QL+G+ F E TL+ Sbjct: 416 GDPLTM--YLSDVCTVPINLAGIPALSIPAGFAD-GLPVGMQLMGKHFAEGTLYKAAYAF 472 Query: 481 EK 482 EK Sbjct: 473 EK 474 >gi|258514076|ref|YP_003190298.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfotomaculum acetoxidans DSM 771] gi|257777781|gb|ACV61675.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfotomaculum acetoxidans DSM 771] Length = 485 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 227/488 (46%), Positives = 312/488 (63%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L M E L K++SAVE+ S ++ ++NAYI + +KA AE D + Sbjct: 2 QLYQMTAHELHRLLVKKEVSAVEIAKSVYDRTDDLERKINAYITLTKEKAMRQAEAVDAK 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+A L GIP+ +KD TK + T S IL F P Y +TV +KL N AV+LGK Sbjct: 62 IAAGEAIAPLSGIPVAVKDNICTKDVRTTCASKILHNFVPPYNATVMEKLEANQAVLLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S Y +PW + ++ T GGSSGGS+A +A S+G+DTG Sbjct: 122 TNMDEFAMGSSTENSAYFVTKNPW----NIERVT-GGSSGGSAAVIAAGEAVCSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ G VG+KPTYG SR G+++FA SLDQ G TR V D AI+L AI GYD Sbjct: 177 GSIRQPAALCGVVGMKPTYGAVSRYGLVAFASSLDQIGPFTRDVADCAIMLNAICGYDPK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + VPDY L ++G+ +G+PKEY + + P + K + I + GA++ E Sbjct: 237 DSTSAKVGVPDYTSFLINDVKGLKIGVPKEYMAEGIEPEVRKAIEAAIEKFIELGAEVEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 LPHT YALP YYII+PAEASSNLARYDGVRYG R E ++I++M+ TRS GFG+EVK Sbjct: 297 TVLPHTDYALPTYYIIAPAEASSNLARYDGVRYGHRTEEPENIVDMFMRTRSEGFGEEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A K+RTLI +D AF + DV+L+PTTP+ AF +G++ Sbjct: 357 RRIMLGTYALSAGYYDAYYLKALKVRTLIMQDLERAFAK-YDVLLSPTTPSVAFKMGEKI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M +D+ T++ N+AG+PA+S+PA +P+G+QL+G+PF E L Sbjct: 416 DSPIQM--YLSDICTLSANLAGIPAMSLPAGFV-GNLPVGMQLMGKPFDEGMLLRFAYTF 472 Query: 481 EKEAGYFR 488 E+ + + Sbjct: 473 EQNTDFHK 480 >gi|313668490|ref|YP_004048774.1| Glu-tRNAGln amidotransferase subunit A [Neisseria lactamica ST-640] gi|313005952|emb|CBN87409.1| Glu-tRNAGln amidotransferase subunit A [Neisseria lactamica 020-06] Length = 481 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 300/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL + Y+ AI N +N YI + +K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELANEYLAAIAEKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDESMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+ VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGATKNPWNP-----EHVPGGSSGGSAVVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLNQPLKGVKIGLPKEYFGEGNSADVQTALQNTIDLLKTQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT PT+A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPTAAPKIGAD---ASPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLIGNYFSEARILGAAHQIQ 470 >gi|116750922|ref|YP_847609.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Syntrophobacter fumaroxidans MPOB] gi|166217724|sp|A0LP22|GATA_SYNFM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116699986|gb|ABK19174.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Syntrophobacter fumaroxidans MPOB] Length = 486 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/481 (48%), Positives = 320/481 (66%), Gaps = 9/481 (1%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E D L K++S E + S++ IE + ++N+Y+ V+A+ + A A D+ + Sbjct: 6 LTMHELHDLLVRKELSVTETLTSFLTRIETLDPRLNSYLSVLAESSLAEAGRFDRGERDL 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ IKD +G T S IL+ F P Y+ TV +L + GA+ LGK NMDE Sbjct: 66 HASPLAGIPLAIKDVLCMQGTVTTCGSRILENFVPPYDGTVIARLREAGAIFLGKTNMDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S YG +PW + PGGSSGGS+AAVA LC+ S+GTDTGGSIRQ Sbjct: 126 FAMGSSTENSAYGVTRNPWDR-----ERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYGR SR G+++FA SLDQ G IT+ V D+AILL+AIAG+D D+T V Sbjct: 181 PASFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKDVEDAAILLQAIAGHDRRDSTSV 240 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY +L + I+G+ +GIPKEY + + P I + Q+ I+ GA++ E+SLPH Sbjct: 241 DHPVPDYRASLREPIKGLRLGIPKEYFVHGMHPEIADSVQRAINVCLQLGAEVGEVSLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 T Y + AYYII+PAEASSNLARYDGV+YGLRV + +D++ MY +RS GFG EVK RIM+ Sbjct: 301 TGYGVAAYYIIAPAEASSNLARYDGVKYGLRVPDARDLIGMYRTSRSQGFGAEVKRRIML 360 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLS+ YD++Y +A + RTLI++DF +AF+ D +L P P AF +G++ ++ Sbjct: 361 GTYVLSAGYYDAYYTKASQARTLIRKDFLDAFDS-FDALLAPVAPVPAFKIGEKSDDPLQ 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND T+ ++AG+P ISVP + +P+GLQ++G FRE+ L + E+ Sbjct: 420 M--YLNDALTLPASLAGVPGISVPCGFSGEGLPIGLQILGPHFREDLLLRIAYQFEQATA 477 Query: 486 Y 486 + Sbjct: 478 H 478 >gi|124025640|ref|YP_001014756.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. NATL1A] gi|166217696|sp|A2C1Y1|GATA_PROM1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|123960708|gb|ABM75491.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. NATL1A] Length = 486 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/485 (48%), Positives = 320/485 (65%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R +L+S ++S+ ELV I I + +N+++ V + A + AE DK+I +G Sbjct: 1 MTFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHIDKQIASG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIPI IKD TKGI T S ILD F P YESTVT+KL + GA+M+GK NMD Sbjct: 61 DHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +GP ++PW PGGSSGGS+A+VA LC S+G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGPTLNPWNITK-----VPGGSSGGSAASVAAGLCYGSLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+I+FA SLDQ G V D+A +L+ I+G DE D+T Sbjct: 176 QPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTT 235 Query: 246 VNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 V++PVP+Y L +SI+GM +G I + + L+ + ++ S L++ GA+IV IS Sbjct: 236 VDIPVPNYLETLSKSIKGMKIGLIDNCFDHEGLATDVKESVLSSASLLENLGAEIVNISC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + ++EM +R++GFG EVK RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAEDEQSLIEMTSKSRALGFGSEVKRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF +AF++ VDV+L PT PT+AF G +N Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDDAFKK-VDVLLAPTAPTTAF--GSGDNID 412 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 M +D+ T+ N+AGLPAIS+P + +P+GLQLIG F E L V EK Sbjct: 413 NPMAMYLSDLLTIPANLAGLPAISLPCGFDKSDLPIGLQLIGNVFEEGKLLQVANQFEKA 472 Query: 484 AGYFR 488 A ++ Sbjct: 473 AEVYK 477 >gi|189426242|ref|YP_001953419.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacter lovleyi SZ] gi|229485883|sp|B3EA24|GATA_GEOLS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189422501|gb|ACD96899.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacter lovleyi SZ] Length = 485 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 229/473 (48%), Positives = 327/473 (69%), Gaps = 9/473 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + +L+++ +S+VE+ +S++ IE+++ +NA+I V ++A A +D+R Sbjct: 2 ELYEQTIHNLQTQLQARQVSSVEITNSFLDRIESTDQSINAFITVTKEQALLDAAAADQR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ +KD F T+G+ T + S +LD F Y++T ++ GAV+LGKL Sbjct: 62 IAAGNCAPLTGIPVALKDIFLTEGVRTTSASKMLDNFIAPYDATAWTRMKSQGAVLLGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSS E S +GP +PW PGGSSGGS+AA+A A++GTDTGG Sbjct: 122 NQDEFAMGSSCENSAFGPTRNPWNK-----DHIPGGSSGGSAAAIAAQQAVATLGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+I++A SLDQ G +TR V D+A+LL IAGYD D Sbjct: 177 SIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPMTRDVTDAALLLGVIAGYDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V+ PVPDY AL Q ++G+T+G+PKEY +D L + + +Q I+ + GA+ VE+ Sbjct: 237 STSVDCPVPDYTAALQQGVKGLTIGLPKEYFIDGLDADVQQAMEQAIAVYRQLGAEFVEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLPHT YA+ YY+I+ AEASSNLARY+GVR+G R + ++++ +RS GFG EVK Sbjct: 297 SLPHTNYAVATYYLIATAEASSNLARYEGVRFGHRAKDTAGLIDLMMQSRSEGFGAEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y++A+K+RTLI++DF EAF + VD++LTP PT AF +G E Sbjct: 357 RIMLGTYALSSGYYDAYYIKAQKVRTLIQQDFNEAF-RSVDLLLTPVAPTPAFRIG--EK 413 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + + +D+FT+ VN+AG+ ISVPA + +P+GLQL+G+PF EET+ Sbjct: 414 TADPLQMYLSDIFTIPVNLAGICGISVPAGISSNGLPIGLQLLGRPFGEETIL 466 >gi|206891093|ref|YP_002248974.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermodesulfovibrio yellowstonii DSM 11347] gi|229464476|sp|B5YL59|GATA_THEYD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|206743031|gb|ACI22088.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermodesulfovibrio yellowstonii DSM 11347] Length = 484 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 228/486 (46%), Positives = 325/486 (66%), Gaps = 8/486 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ELN + ++E + ++ E++ + ++ ++ AYI + +KA A E++ Sbjct: 2 ELNKLKLTELVPLISKGEVRPHEIIIDVFKRVQEVEGKVKAYITLTVEKAYDMAREAENA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I +G L GIPI +KD TKGI T S IL F P YESTVT KL +N +++GK Sbjct: 62 IFSGKKSLLTGIPIAVKDNICTKGILTTCASKILYNFYPPYESTVTSKLLNNKYILIGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS E S + +PW + PGGSSGGS+AAVA C A++G+DTGG Sbjct: 122 NMDEFAMGSSTENSGFHVTKNPWDL-----ERVPGGSSGGSAAAVAADECIAALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G VG+KPTYGR SR G+++FA SLDQ G IT+ V D+A+L+ I+G+D D Sbjct: 177 SIRQPASFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKCVADAALLMNVISGHDPMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + D+ L + ++G+ +GIPKEY ++ + +++ + I L+ G VEI Sbjct: 237 STSAPIESSDFTEYLGKEVKGIKIGIPKEYFIEGMDKEVEERIKDAIKELESLGCIPVEI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SLPHT+YA+ YYII+ +EASSNLARYDGV+YGLRV+GKD+LEMY TRS GFG EVK R Sbjct: 297 SLPHTEYAVATYYIIATSEASSNLARYDGVKYGLRVQGKDLLEMYMKTRSRGFGTEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ Y+++Y +A+++RTLIK DF +AFE+ VD I+TPT P+ AF +G++ ++ Sbjct: 357 IMLGTYSLSAGYYEAYYKKAQQVRTLIKNDFEKAFEK-VDFIVTPTAPSPAFKIGEKIDD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M +D+FT++VN+AG+PAIS+P EK +P+GLQ+IG+PF E + + E+ Sbjct: 416 PLQM--YLSDIFTISVNLAGVPAISLPCGFSEKGLPVGLQIIGKPFDEAGILQLAYAYEQ 473 Query: 483 EAGYFR 488 + + Sbjct: 474 STPWHK 479 >gi|119477382|ref|ZP_01617573.1| glutamyl-tRNA amidotransferase subunit A [marine gamma proteobacterium HTCC2143] gi|119449308|gb|EAW30547.1| glutamyl-tRNA amidotransferase subunit A [marine gamma proteobacterium HTCC2143] Length = 489 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/475 (50%), Positives = 318/475 (66%), Gaps = 10/475 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E L S D S+ EL YI I+ + N++I V ++A A A +D RI +G+ Sbjct: 6 LAELSKGLASGDFSSSELTKHYIGRIKQLDPTFNSFISVTEEQALAQATAADSRIASGNT 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F T G+ T S +LD F P Y++TV +K +G V LGK NMDEFA Sbjct: 66 TPLTGIPIAHKDIFCTAGVKTSCGSKMLDNFIPPYDATVVEKFNQSGVVSLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE+S+YG V +PW S++ PGGSSGGS+AAVA L AS GTDTGGSIRQPA Sbjct: 126 MGSSNESSFYGIVKNPW-SLNCV----PGGSSGGSAAAVAAQLAPASTGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I+FA SLDQAG +TRT D+A++L +AG DE D+T ++ Sbjct: 181 ALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMTRTAEDAAMMLNIMAGVDEKDSTSMDQ 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P PDY L+ + G+ +GIPKEY + L+P I++ Q I + GA + EISLP+T Sbjct: 241 PTPDYTEQLNNDLTGLRIGIPKEYFGEGLTPAIEQAVQSAIKEYQSLGAIVKEISLPNTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 A+P YYII+P+EAS+NL+R+DGVRYG R E +D+L++Y TR GFG EVK RI+IGT Sbjct: 301 LAVPCYYIIAPSEASANLSRFDGVRYGYRCEDPEDLLDLYTRTREEGFGDEVKRRILIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++Y +A++IR LIK DF AFE VDVI+ PT P +AF +G++ N+ SM Sbjct: 361 YALSAGFYDAYYKKAQQIRRLIKNDFVAAFED-VDVIMGPTVPNTAFEIGEKSNDPVSM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++T+ N+AGLP +S+PA + E K P GLQLIG F E L +V ++ Sbjct: 419 -YLEDIYTIPTNLAGLPGMSIPAGIIEGK-PAGLQLIGNYFDEGRLLNVAHKFQQ 471 >gi|194098807|ref|YP_002001870.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae NCCP11945] gi|239999098|ref|ZP_04719022.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae 35/02] gi|240080555|ref|ZP_04725098.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae FA19] gi|240118129|ref|ZP_04732191.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae PID1] gi|240125868|ref|ZP_04738754.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae SK-92-679] gi|254493876|ref|ZP_05107047.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae 1291] gi|260440353|ref|ZP_05794169.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae DGI2] gi|268594936|ref|ZP_06129103.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae 35/02] gi|268596685|ref|ZP_06130852.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae FA19] gi|268603845|ref|ZP_06138012.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae PID1] gi|268684466|ref|ZP_06151328.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae SK-92-679] gi|291043648|ref|ZP_06569364.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae DGI2] gi|229486006|sp|B4RM85|GATA_NEIG2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|193934097|gb|ACF29921.1| putative Glu-tRNA(Gln) amidotransferase subunit [Neisseria gonorrhoeae NCCP11945] gi|226512916|gb|EEH62261.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae 1291] gi|268548325|gb|EEZ43743.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae 35/02] gi|268550473|gb|EEZ45492.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae FA19] gi|268587976|gb|EEZ52652.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae PID1] gi|268624750|gb|EEZ57150.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae SK-92-679] gi|291012111|gb|EFE04100.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae DGI2] gi|317164389|gb|ADV07930.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae TCDC-NG08107] Length = 481 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 299/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSFEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA+ VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAEPVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---TSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|240013995|ref|ZP_04720908.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae DGI18] gi|240121561|ref|ZP_04734523.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae PID24-1] Length = 481 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 299/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSFEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA+ VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAEPVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---TSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|257469262|ref|ZP_05633356.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium ulcerans ATCC 49185] gi|317063509|ref|ZP_07927994.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium ulcerans ATCC 49185] gi|313689185|gb|EFS26020.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium ulcerans ATCC 49185] Length = 485 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/488 (44%), Positives = 323/488 (66%), Gaps = 14/488 (2%) Query: 5 NFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 NF +S E ++++ +I + ++V + IE + ++ +++ + +KA A D++ Sbjct: 3 NFYKLSAVEIKEKISKGEIKSEDVVKEIFERIEKIDGKIGSFVHLRKEKALGEARRVDEK 62 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + NG+ L GIP+ IKD ++G T +CS IL+G+ Y++T +KL + AV++G Sbjct: 63 VKNGEKLGALAGIPVTIKDNMVSEGDVTTSCSKILEGYTGVYDATAVKKLKEADAVIIGI 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ +TS Y +PW + + PGGSSGG+ A++A S+G+DTG Sbjct: 123 TNMDEFAMGSTTKTSCYKKTKNPWDT-----ERVPGGSSGGAVASIAAQEAFISLGSDTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYGR SR G+++FA SLDQ G + + V D A+ + IAG D+ Sbjct: 178 GSIRQPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGPVAKNVADIALCMNVIAGEDDY 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT VPDY L + I+GM +G+PKEY +D + + K + + ++ GA+IVE Sbjct: 238 DATVSKKEVPDYTEFLGKDIKGMKIGVPKEYFIDGIKEDVKKVMNESLEKFRELGAEIVE 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 ISLPHT+YA+P YY+++PAEASSNLAR+DGVRYG R + K+I ++Y N+R+ GFG EVK Sbjct: 298 ISLPHTKYAVPTYYVLAPAEASSNLARFDGVRYGYRSKDIKNIDDLYINSRTEGFGDEVK 357 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD+++ +A+K+R LIK DF +AFE VD+I TP +P++AF L + Sbjct: 358 RRIMIGTYVLSAGFYDAYFKKAQKVRKLIKDDFDKAFEN-VDIIFTPVSPSTAFKL---D 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + D+FT++ N+AG+P IS+PA L E +P+G+QL+G+PF E L G Sbjct: 414 DVKTPIELYLEDIFTISANLAGIPGISIPAGLAE-GLPVGIQLLGKPFCEGELIQAGNAF 472 Query: 481 EKEAGYFR 488 EK G ++ Sbjct: 473 EKIRGEWK 480 >gi|240123678|ref|ZP_04736634.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria gonorrhoeae PID332] gi|268682309|ref|ZP_06149171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae PID332] gi|268622593|gb|EEZ54993.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria gonorrhoeae PID332] Length = 481 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 219/467 (46%), Positives = 299/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+A L G+P Sbjct: 13 LQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWCSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNP-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSFEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA+ VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVQTALQNTIDLLKAQGAEPVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P++A +G + + + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPSAAPKIGAD---TSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QL+G F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470 >gi|270291085|ref|ZP_06197308.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pediococcus acidilactici 7_4] gi|304385362|ref|ZP_07367707.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pediococcus acidilactici DSM 20284] gi|270280481|gb|EFA26316.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pediococcus acidilactici 7_4] gi|304328569|gb|EFL95790.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pediococcus acidilactici DSM 20284] Length = 486 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 217/485 (44%), Positives = 312/485 (64%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V+E +L ++++ ELV + IE + +N ++ + +A A+ D++ ++ Sbjct: 6 ITVTELHQKLVDRELTVTELVSQTLDQIEADQAVLNDFVTINRDEALKQAQAIDEKGVDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D GIPI +KD TKG+ T A S +L F P Y++TV ++L N +++GK N+DE Sbjct: 66 DNL-WAGIPIAVKDNIVTKGLKTTASSKMLSNFTPIYDATVIERLKANDVIVIGKTNLDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG S ETS+YG +PW D T PGGSSGGS+ VA A++G+DTGGSIRQ Sbjct: 125 FAMGGSTETSFYGTTRNPW---DHTK--VPGGSSGGSATTVAAGNSIAALGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+TG VG+KPTYGR SR G+I+F SLDQ G +TRTV+D+A LL IAG DE D T Sbjct: 180 PASYTGIVGVKPTYGRISRYGLIAFGSSLDQIGPMTRTVKDNAALLNIIAGMDERDLTSS 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + VPD+ + Q I+GM + +PKEY ++ + T +Q + L D GA + E+SLP Sbjct: 240 DKKVPDFTAKIGQDIKGMKIALPKEYLGKGINEDVKATIKQAVQTLTDLGATVEEVSLPR 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 + Y + AYYII +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+ Sbjct: 300 SNYGVAAYYIIGSSEASSNLQRFDGIRYGYRADDVKNLEDVYVKSRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD+ + +A ++RTLI DF + FE D+I+ PT PT A+ +G E ++ + Sbjct: 360 GTYALSAGSYDAFFKKAAQVRTLIIDDFNKVFEN-YDLIIGPTAPTPAYKIGAEVDDPTT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M NDV T+ VN+AGLPA+S+PA E MP+GLQ+I +PF E+T++ G E Sbjct: 419 M--YMNDVLTIPVNLAGLPAMSLPAGFSE-GMPVGLQMIAKPFDEQTMYQAGAAFEAATN 475 Query: 486 YFRPH 490 +++ H Sbjct: 476 FYQKH 480 >gi|53802670|ref|YP_112637.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylococcus capsulatus str. Bath] gi|81683214|sp|Q60CK8|GATA_METCA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|53756431|gb|AAU90722.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylococcus capsulatus str. Bath] Length = 485 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/464 (49%), Positives = 310/464 (66%), Gaps = 10/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L ++ S+VEL +++ IE + +N++I + A A A +D+R+ G+A L GIP Sbjct: 13 LERREFSSVELTQAHLARIERLDPALNSFITTTPEIALAQARAADERLAKGEAGPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F TKG+ T S +LD F Y++ V ++ GAVMLGKLNMDEFAMGSSNET Sbjct: 73 IAQKDIFCTKGVRTSCGSRMLDSFVSPYDACVVERFNAAGAVMLGKLNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SYYGPV +PW + PGGSSGGS+AAVA L + GTDTGGSIRQPA+F G G Sbjct: 133 SYYGPVKNPWNTAT-----VPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAAFCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+FA SLDQAG + RT D AI+L+ +AG+DE D+TCV+ PVPDY Sbjct: 188 LKPTYGRVSRWGMIAFASSLDQAGPMARTAEDCAIMLQIMAGFDERDSTCVDRPVPDYRA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL + G+ +G+PKE+ + L P I + + GA + EISLP+ ++PAYY Sbjct: 248 ALGNDLDGLRIGLPKEFFGEGLDPAIAGLIHAAVDEYRRLGAIVREISLPNMHLSVPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAE SSNLAR+DGVR+G R E D+ ++Y +R GFG EVK RI+IGTY LS+ Sbjct: 308 VVAPAECSSNLARFDGVRFGHRCENPTDLADLYTRSRGEGFGAEVKRRILIGTYALSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LI DF AFE+ VDVI+ PT P+ AF G + + +M +D++ Sbjct: 368 YDAYYLKAQKIRRLISEDFRRAFEE-VDVIMGPTAPSVAFEFGAKSADPIAM--YLSDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+AVN+AGLP +S+P +P+G+Q+IG F E+ L +V Sbjct: 425 TIAVNLAGLPGMSIPVGF-SNGLPVGMQIIGGYFSEDRLLNVAH 467 >gi|307823386|ref|ZP_07653615.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacter tundripaludum SV96] gi|307735371|gb|EFO06219.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylobacter tundripaludum SV96] Length = 483 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/471 (48%), Positives = 321/471 (68%), Gaps = 11/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E LRS + S+VEL +++ ++ +S +N+YI V A AAE +D R+ GDA Sbjct: 6 IAELAKGLRSGEFSSVELTTAFLGRLKQ-HSSLNSYITVTEDLALQAAEAADARLAKGDA 64 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ KD F T+G+ T S ILD F Y +TV K + GAVMLGKLNMDEFA Sbjct: 65 ELLTGIPVAQKDIFCTEGVKTTCGSKILDNFIAPYNATVVDKFNNAGAVMLGKLNMDEFA 124 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNETSYYG V +PW PGGSSGG++AAVA L + GTDTGGSIRQPA Sbjct: 125 MGSSNETSYYGVVRNPWDV-----NTVPGGSSGGTAAAVAARLAVCATGTDTGGSIRQPA 179 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I++A SLDQ G +TR+ D+AI+L+ +AG+DE D+T V+L Sbjct: 180 ALCGITGLKPTYGRVSRYGMIAYASSLDQGGPMTRSAEDAAIMLQTMAGFDEKDSTSVDL 239 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPDY L+ S++G+ +G+PKE+ + L+ + + I+ + GA++ EIS+P + Sbjct: 240 PVPDYRAGLNNSLEGLKIGLPKEFFGEGLNSDVATALEAAINECRKLGAQVTEISMPTLK 299 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 A+PAYY+I+PAE S+NL+R+DGVR+G R E D+ ++Y +R GFG+EVK RI++GT Sbjct: 300 LAIPAYYVIAPAECSANLSRFDGVRFGYRCENPADLTDLYTRSRGEGFGKEVKRRILMGT 359 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++Y++A+KIR LI DF A + VDVI+ P TP++AF +G++ N M Sbjct: 360 YALSAGYYDAYYIKAQKIRRLISEDFKRALSE-VDVIMGPVTPSTAFGIGEKIGNPIEM- 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D++T+A+N+AG+PA+SVPA MP+GLQ+IG F E+ L ++ Sbjct: 418 -YLSDIYTIAINLAGVPAMSVPAGFA-NGMPVGLQIIGNYFAEDRLLNIAH 466 >gi|15895928|ref|NP_349277.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium acetobutylicum ATCC 824] gi|39931621|sp|Q97FQ7|GATA1_CLOAB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A 1; Short=Glu-ADT subunit A 1 gi|15025700|gb|AAK80617.1|AE007764_9 Glu-tRNAGln amidotransferase subunit A [Clostridium acetobutylicum ATCC 824] gi|325510080|gb|ADZ21716.1| Glu-tRNAGln amidotransferase subunit A [Clostridium acetobutylicum EA 2018] Length = 485 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 220/492 (44%), Positives = 322/492 (65%), Gaps = 17/492 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + E +D + K++ E+ +S++ IE + ++NA + V ++A A+E DK+ Sbjct: 2 ELYKLKAHELKDMISKKEVKVEEVTNSFLNRIEEVDEKVNALLYVAKEEAVNTAKELDKK 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G++ L G+P+ IKD + K + S IL+G+ Y++TV + L N V++GK Sbjct: 62 IESGESLSGLSGVPVAIKDNISVKNMQNTCASKILEGYVSPYDATVIENLKKNNGVIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW S++ PGGSSGGS+ AVA S+GT+TG Sbjct: 122 ANMDEFAMGSSTENSAFKVSKNPW-SLERV----PGGSSGGSAVAVASLEAPISLGTETG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G+ R V D A+L + IAG D+ Sbjct: 177 GSVRQPASFCGLVGLKPTYGRISRYGVVAFGSTLDQVGMFARDVEDCALLTQNIAGLDKM 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V+ PV DY ++L++ ++G +GIPKE+ + L + + ++ I ++ GA++ E Sbjct: 237 DFTTVDTPVQDYSKSLNKDLKGRKIGIPKEFFEEGLDEGVREAVKEAIKVFEENGAEVKE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 SLP + YAL AYYIIS AEASSNLAR+DGVRYG R E ++ L++Y +RS GFG+E K Sbjct: 297 CSLPLSDYALAAYYIISSAEASSNLARFDGVRYGYRDAEAENALDLYVKSRSKGFGEEAK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS YD++Y +A K+R+LIK DF AF++ D I+TPTTPT AF +G++ Sbjct: 357 RRIMLGTYVLSKGYYDAYYKKALKVRSLIKNDFQRAFKE-FDAIITPTTPTPAFRIGEKT 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + SM +D++TV VN+AG+P+ISVP +P+GLQ++G F+E+TLF++ Sbjct: 416 KDVLSM--YMSDIYTVPVNIAGIPSISVPCGFVS-GLPVGLQIMGNYFKEDTLFNLAY-- 470 Query: 481 EKEAGYFRPHKW 492 Y + KW Sbjct: 471 ----SYEQSTKW 478 >gi|308272774|emb|CBX29378.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [uncultured Desulfobacterium sp.] Length = 486 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/488 (48%), Positives = 319/488 (65%), Gaps = 10/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++++ L+ K+IS+ EL + + I ++ AYI + + A A +DK Sbjct: 2 KLHELTINKAQQLLKGKEISSQELTRAVLDRIAQVEDRVGAYITIASDSAMKEAALADKE 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ +L GIPI +KD TKGI T S ILD F P Y++TV KL GAV++GKL Sbjct: 62 ISKGNMAELTGIPIAVKDLICTKGIRTTCASKILDNFIPPYDATVISKLKKAGAVIVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS E S +PW D T PGGSSGGS+AAVA +C S+G+DTGG Sbjct: 122 NMDEFAMGSSTENSGIKLTRNPW---DLTR--IPGGSSGGSAAAVAADMCIGSLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS VG+KPTYGR SR G+++FA SLDQ G + + V D AIL K I+GYD D Sbjct: 177 SIRQPASHCSVVGLKPTYGRVSRFGLVAFASSLDQIGPVAKDVTDCAILAKVISGYDPSD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVE 301 +T V VPDY L + I+G+ +G+PKEY L P + L+ GA+ VE Sbjct: 237 STSVPKDVPDYTSFLTEGIKGLIIGVPKEYDTAKGLDPQVFAAITNARKVLETLGAQCVE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +SLPHT+YA+PAYY+I+P+EASSNLARYDGV+YG R + K+++EMY+NTRS GFG EVK Sbjct: 297 VSLPHTEYAVPAYYVIAPSEASSNLARYDGVKYGFRDKDSKNLMEMYKNTRSKGFGPEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+IGTY LS+ YD+ Y +A ++RTLI DFT+AFE DVIL+P PT AF +G Sbjct: 357 RRIIIGTYCLSAGYYDAFYKKASQVRTLITDDFTKAFEI-CDVILSPVAPTPAFKIGDNA 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M +D+FT++ N+AG+P +SVP +P+GLQL+G+ F EE L Sbjct: 416 DDPLTM--YLSDIFTLSANLAGIPGLSVPCGFSSGGLPIGLQLLGKHFGEEVLLKTAYNF 473 Query: 481 EKEAGYFR 488 E+ G+ + Sbjct: 474 EQATGFHK 481 >gi|148657057|ref|YP_001277262.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Roseiflexus sp. RS-1] gi|259647225|sp|A5UXF9|GATA_ROSS1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148569167|gb|ABQ91312.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Roseiflexus sp. RS-1] Length = 487 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/482 (48%), Positives = 324/482 (67%), Gaps = 9/482 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ + +S++R+ L +I++VEL D+ + I Q+ A++ + A+ ARA A+ +D Sbjct: 1 MTLLHQLTLSDAREALMRGEITSVELTDALLARIAAVEPQVRAFLTIDAEGARAQAQAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R GD L GIP+GIKD +T+G+ T S +L+ + P Y++T +L GAV++G Sbjct: 61 ARRAAGDTSPLLGIPLGIKDVISTQGVRTTCASKMLENYVPVYDATAVARLKAAGAVLIG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSS E S + +PW SSGGS+AAVA A++GTDT Sbjct: 121 KLNCDEFAMGSSTENSAFQQTRNPWNLERVPGG-----SSGGSAAAVAAGEAPATLGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ G G+KPTYGR SR G+++FA SLDQ G + RTVRD AI+L+ IAG D Sbjct: 176 GGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIILRVIAGADP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DATC + PVPDYE AL I+G+ +G+P+EY + + P ++ + I L+D GA++ Sbjct: 236 FDATCTDHPVPDYEAALTGDIRGLRIGVPREYFVAGMQPEVESAVRVAIDVLRDQGAEVR 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT YALP YY+I+PAEAS+NLAR+DGVRYGLRV G+ + E TR GFG EV+ Sbjct: 296 EISLPHTPYALPVYYLIAPAEASANLARFDGVRYGLRVPGESYFDELERTRGAGFGPEVR 355 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++Y RA+++RTLI+RD+ +AFEQ VDVI PTTPT AFP+G Sbjct: 356 RRIMLGTYALSAGYYDAYYKRAQQVRTLIRRDYQQAFEQ-VDVIAAPTTPTVAFPIGAHS 414 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M DV T+ +N+AGLP + VP +P+GLQLIG+ F EETL +G Sbjct: 415 DDPLAM--YLEDVCTLPLNLAGLPGLVVPCGFA-AGLPIGLQLIGRAFDEETLLRIGDAY 471 Query: 481 EK 482 ++ Sbjct: 472 QR 473 >gi|260880989|ref|ZP_05403344.2| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mitsuokella multacida DSM 20544] gi|260850128|gb|EEX70135.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mitsuokella multacida DSM 20544] Length = 476 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 230/474 (48%), Positives = 319/474 (67%), Gaps = 9/474 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L +K+I++VEL + I+ + AY+ V ++A A AE DK+I G+A LEGI Sbjct: 2 LVNKEITSVELTQDVLSRIDEVEGDVEAYLTVTREEALAQAEAVDKKIAAGEAISFLEGI 61 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P IKD TKG+ T S IL+ F P Y++TV K+ V+LGK+NMDEFAMG S E Sbjct: 62 PGAIKDNICTKGVKTTCASKILEHFVPPYDATVMTKIKAENPVILGKVNMDEFAMGGSTE 121 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y +PW ++D PGGSSGGS+AAVA ++G+DTGGSIRQPASF G V Sbjct: 122 NSAYHVTHNPW-NLDCV----PGGSSGGSAAAVAAGTAIWALGSDTGGSIRQPASFCGVV 176 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G++++A SLDQ G +TR V D A LL IAG+DE D+T VPDY Sbjct: 177 GMKPTYGRVSRYGLVAYASSLDQIGPLTRDVTDCANLLNIIAGHDEMDSTSSAAEVPDYT 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 ++L + ++G+ +G+PKEY ++ + P +++ + I ++ GA++VEISLPHT+YA+ Y Sbjct: 237 KSLVEDVKGLKIGLPKEYFVEGMDPEVEQAVRTAIKKYEELGAEVVEISLPHTEYAISTY 296 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 Y+I+PAEA++NL RYDGV YG RV+G+D+++M NTR FG+EVK RIMIG Y LS+ Sbjct: 297 YLIAPAEAATNLERYDGVSYGERVDGEDLVQMMTNTRDEKFGEEVKRRIMIGNYALSAGY 356 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A K+RTL+++D+TEAF++ VDVI+ PT PT AF +G E + + DV Sbjct: 357 YDAYYLKALKVRTLVQQDYTEAFKK-VDVIMAPTAPTPAFKIG--EMIADPLQMYLQDVC 413 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 TV +N+AGLP IS+P K +P+GLQ+IG+P EETL E+ Y + Sbjct: 414 TVPLNLAGLPGISIPCGKSSKGLPIGLQIIGKPLAEETLIRTAYTYEQSQDYHK 467 >gi|167631044|ref|YP_001681543.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, a subunit [Heliobacterium modesticaldum Ice1] gi|229485884|sp|B0TDK7|GATA_HELMI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|167593784|gb|ABZ85532.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, a subunit [Heliobacterium modesticaldum Ice1] Length = 487 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/477 (48%), Positives = 314/477 (65%), Gaps = 11/477 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-R 69 E D L K++SA E+V + ++ ++ A++ + KA A D +I G+A Sbjct: 10 ELHDLLVRKEVSATEIVKTQADRMQALEPKIRAFVTLTVDKALEQAARVDAKIAAGEAIG 69 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 LEGIP+ IKD T G+ T S IL+ F P Y++TV KL + GAVM+GK N+DEFAM Sbjct: 70 PLEGIPMAIKDNMCTDGVRTTCSSKILNNFVPPYDATVVTKLKEAGAVMMGKTNLDEFAM 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSS E S + +PW + PGGSSGGS+A+VA S+G+DTGGSIRQPA+ Sbjct: 130 GSSTENSGFFATCNPWDI-----ERVPGGSSGGSAASVAAGQAVFSLGSDTGGSIRQPAA 184 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYG SR G+I+FA SLDQ G TR VRD A ++ AIAG+D D+T + Sbjct: 185 FCGVVGLKPTYGAVSRFGLIAFASSLDQIGPFTRDVRDCAHVMNAIAGHDAKDSTSAPVD 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 PDY L + I+G VG+PKEY D + P + + ++ + ++D GA++ E SLPHT+Y Sbjct: 245 YPDYTSLLGKPIKGWRVGLPKEYFGDGMDPEVKEVIEKAVKTIEDLGAEVAECSLPHTEY 304 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTY 368 ALP YY+I+PAEASSNLARYDGVRYG R E D++ M++ TR+ GFG EVK RIM+GTY Sbjct: 305 ALPVYYLIAPAEASSNLARYDGVRYGYRSESADDLITMFKKTRAEGFGDEVKRRIMLGTY 364 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS YD++YL+A K+RTLIK DF +AFE+ DVIL+PTTPT AF G +N M Sbjct: 365 ALSSGYYDAYYLKALKVRTLIKNDFDQAFEK-FDVILSPTTPTVAFKFGDRTDNPLQM-- 421 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +D++T++VN+AG+P +S+ A K MP+GLQ+IG+PF E L + E+ G Sbjct: 422 YLSDIYTLSVNLAGIPGLSINAGFA-KGMPVGLQIIGKPFDEARLLQIAYAYEEATG 477 >gi|16330190|ref|NP_440918.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechocystis sp. PCC 6803] gi|6225418|sp|P73558|GATA_SYNY3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|1652678|dbj|BAA17598.1| amidase [Synechocystis sp. PCC 6803] Length = 483 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/469 (49%), Positives = 323/469 (68%), Gaps = 9/469 (1%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EG 73 +L ++ISAV + + + IE + ++ ++++V A +A A AE+ D +I G+ L G Sbjct: 10 QLIDQEISAVAVAQASLARIEAVDDRLKSFLQVTAPQAIAQAEKVDAQIAAGEPIGLLAG 69 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPIGIKD TKGI T S IL GF P YESTVT+KL GAVM+GK N+DEFAMGSS Sbjct: 70 IPIGIKDNLCTKGIVTTCASQILRGFVPPYESTVTEKLQKAGAVMVGKTNLDEFAMGSST 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S Y +PW D T PGGSSGGS+AAVA C ++G+DTGGSIRQPAS G Sbjct: 130 ENSGYQVTANPW---DLTR--VPGGSSGGSAAAVAADECLIALGSDTGGSIRQPASLCGV 184 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G++++A SLDQ G R V D+AILL+AIAG+D D+T +++P+PDY Sbjct: 185 VGMKPTYGLVSRFGLVAYASSLDQIGPFARRVEDAAILLQAIAGHDSRDSTSLDVPIPDY 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +AL ++G+ VG+ + + L T+++ Q I+ L++ GA I EI P + + A Sbjct: 245 TQALKPDLKGVKVGVIMDAFGEGLDDTVNEAVQTAIAKLRELGATIEEIHCPRFRSGIAA 304 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YY+I+P+EAS+NLARYD VRYGLR E +++EMY +TR+ GFG EVK RIM+GTY LS+ Sbjct: 305 YYVIAPSEASANLARYDAVRYGLRAEADNLMEMYTHTRAKGFGAEVKRRIMLGTYALSAG 364 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+K+RTLIK+DF +AF + VDV++ PT PT+AF G++ ++ SM +D+ Sbjct: 365 YYDAYYLKAQKVRTLIKQDFDQAFTK-VDVLVCPTAPTTAFKAGEKTDDPLSM--YLSDL 421 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+ VN+AGLPA+SVP + +P+GLQL+G EE LF VG E+ Sbjct: 422 MTIPVNLAGLPAMSVPCGFDDNNLPIGLQLVGNVLGEEMLFRVGYAYEQ 470 >gi|218441126|ref|YP_002379455.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. PCC 7424] gi|226709591|sp|B7KLL5|GATA_CYAP7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|218173854|gb|ACK72587.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cyanothece sp. PCC 7424] Length = 483 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/482 (47%), Positives = 319/482 (66%), Gaps = 9/482 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L K+ SAVE+ + IE +++++ + A +A +A++ D +I + Sbjct: 3 SIRELHQQLIKKERSAVEITTEALDRIEKLEPLLHSFLHITADQALESAKKVDAKIAAKE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L EGIP+GIKD T+GI T S IL+ F P YESTVTQKL D+GA+ LGK N+DE Sbjct: 63 EIGLLEGIPVGIKDNMCTQGIPTTCGSKILENFVPPYESTVTQKLKDSGAITLGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E+S Y +PW PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTESSGYQVTANPWDL-----SRVPGGSSGGSAAAVASEECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+ G VG+KPTYG SR G++++A SLDQ G RTV D+AILL AIAGYD D+T + Sbjct: 178 PASYCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDAAILLGAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ +PDY + L + + +GI KE + L P + T QG+ LK GAK+ EIS P Sbjct: 238 NVEIPDYTQFLKPKLSKLKIGIIKETFGEGLDPVVADTVNQGVEQLKKLGAKVKEISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EAS+NLARYD V+YG+R E ++ MY TR+ GFG EVK RIM+G Sbjct: 298 FRYGLPAYYIIAPSEASANLARYDAVKYGIRKEADTLMSMYTTTRASGFGAEVKRRIMLG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF +AFE+ VDV++ PT PT+AF G++ ++ SM Sbjct: 358 TYALSAGYYDAYYLKAQKVRTLIKQDFEQAFEE-VDVLVCPTAPTTAFKAGEKTDDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ T+ VN+ GLP +S+P +P+G+QLI RE+ LF V E+ + Sbjct: 417 --YLSDLMTIPVNLGGLPGMSIPCGFDRLGLPIGMQLISNVLREDLLFQVAYAYEQATDW 474 Query: 487 FR 488 + Sbjct: 475 HK 476 >gi|302608200|emb|CBW44449.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Marinobacter hydrocarbonoclasticus] Length = 485 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 321/476 (67%), Gaps = 6/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+E L S IS+VEL ++ ++ + + N++I + ++A A A +D+ G Sbjct: 5 SVAELSRELESGRISSVELTQQFLDRLKTEDGKYNSFITISDEQALAEARAADEMRAAGK 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A G+P KD F T GI T S +LD F P Y++TVT GAV LGK NMDEF Sbjct: 65 ATVWTGVPFAHKDIFCTSGIRTSCGSKMLDNFVPPYDATVTANFKAAGAVCLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE+S+YG V +PW + DK PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 125 AMGSSNESSFYGAVTNPW-GLSGGDKRVPGGSSGGSAAAVAARLVPAATGTDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G+KPTYGR SR G+I+FA SLDQ G + RT D+A++L +AG+D D+TC++ Sbjct: 184 AALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMARTAEDAALMLNVMAGHDPKDSTCID 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY L++ ++G+ +G+PKEY D L+P +++ + I + GA + E+SLP+ Sbjct: 244 REVPDYTATLNEPLKGLKIGLPKEYFSDQLAPAMEEQVRNAIREYEKLGATVKEVSLPNA 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ AYY+I+PAEAS+NL+R+DGVRYG R E KD+++MY +R+ GFG EVK RI++G Sbjct: 304 KLAIAAYYVIAPAEASANLSRFDGVRYGYRCEDPKDLMDMYTRSRAEGFGNEVKRRILVG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +Y LS+ +D++YL+A+K+R LI++DF AF++ VDV+++P +PT AF G E N+ + Sbjct: 364 SYALSAGYFDAYYLKAQKVRRLIQQDFINAFKE-VDVLMSPVSPTPAFKQG--EKNTDPV 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DVFT+A+N+AG+PA+SVPA + +P+GLQ+IG F E L + ++ Sbjct: 421 SMYLEDVFTIAINLAGIPAMSVPAGFVD-GLPVGLQIIGDYFSEARLLNAAHQFQQ 475 >gi|295397187|ref|ZP_06807290.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Aerococcus viridans ATCC 11563] gi|294974576|gb|EFG50300.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Aerococcus viridans ATCC 11563] Length = 484 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/478 (47%), Positives = 322/478 (67%), Gaps = 10/478 (2%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 ++L + +++VELV+ I+ I+ N +NA I + + A A A+ SD++ + D R L+G Sbjct: 13 EKLVAGQVTSVELVEEAIRRIKAENDTINAVITLDEENALAKAKASDEKGYSSD-RPLQG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPIG+KD T G+ T A S +L F P Y++TVT+KL GA+ + KLNMDEFAMG SN Sbjct: 72 IPIGLKDNILTNGVTTTAASKMLADFVPIYDATVTEKLAAAGAINIAKLNMDEFAMGGSN 131 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+GPV +P+ TD+ PGGSSGGS+AAV+ A++GTDTGGSIRQPA++ G Sbjct: 132 ETSYFGPVRNPF----DTDR-VPGGSSGGSAAAVSAGQVMATLGTDTGGSIRQPAAYNGI 186 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+ISFA SLDQ G +TRTV D+AI+L+AIAGYD+ D+T N+ VP+Y Sbjct: 187 VGMKPTYGRVSRWGVISFASSLDQVGPMTRTVEDNAIMLEAIAGYDDHDSTSANIEVPNY 246 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ +QG+TVG+P E+ D + + + + I L++AGA I EIS + +Y +P Sbjct: 247 VASMKDGVQGLTVGVPVEFFGDAVDEQVKEQVRASIKQLENAGATIKEISFENLKYGIPV 306 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEASSNL RYDG+RYG R E D+ E+Y NTR+ GFG EVK R+M GT+ ++S Sbjct: 307 YYIIASAEASSNLQRYDGIRYGYRAESFNDLEELYVNTRTEGFGDEVKRRLMTGTFSIAS 366 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 +D ++++A K+R LIK F F + VD+I++P T +AF LG E N + D Sbjct: 367 ENFDEYFMKAAKVRMLIKEAFDSIFSE-VDLIVSPVTTGTAFKLG--EKNDDPIEMYMAD 423 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 + TV VN+AGLP +S+P +K +P+GLQ+IG F EE ++ +E+ + H Sbjct: 424 LLTVPVNLAGLPGLSMPVGFDDKGLPIGLQIIGNRFEEEKIYRAAYAVEQVNDAYTKH 481 >gi|297528698|ref|YP_003669973.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Geobacillus sp. C56-T3] gi|297251950|gb|ADI25396.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. C56-T3] Length = 485 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 232/483 (48%), Positives = 327/483 (67%), Gaps = 11/483 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE L+ K++S +LVD + I ++ A++ + ++ARA A+E D R+ G+ Sbjct: 7 SVSELHTLLQKKEVSVSDLVDESYRRIGEVEEKVQAFLTLNEEQARAKAKELDDRLAKGE 66 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TKG+ T S IL F P Y++TV ++L GA+ +GKLNMDE Sbjct: 67 ETNPLFGLPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVMERLHAAGAITIGKLNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 127 FAMGSSTENSGFQLTRNPWDV-----ERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AIAG D D+T Sbjct: 182 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAIAGVDPMDSTSA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+PVP+Y AL I+G+ + +PKEY + + + ++ ++ L+ GA E+SLPH Sbjct: 242 NVPVPNYVEALTGDIKGLKIAVPKEYLGEGVDEGVRQSVLAALAVLEKLGAAWEEVSLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+ Sbjct: 302 SKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKLTRSEGFGAEVKRRIML 361 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LSS YD++Y +A+K+RTLIKRDF FEQ DVI+ PTTPT AF +G++ N+ + Sbjct: 362 GTFALSSGYYDAYYKKAQKVRTLIKRDFENVFEQ-YDVIIGPTTPTPAFKIGEKTNDPLT 420 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ T+ VN+AG+PAISVP + +P+GLQ+IG+ F E T++ V E+ Sbjct: 421 M--YMNDILTIPVNLAGVPAISVPCGFVD-GLPVGLQIIGKHFDESTVYRVAHAFEQATD 477 Query: 486 YFR 488 Y + Sbjct: 478 YHK 480 >gi|300113192|ref|YP_003759767.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Nitrosococcus watsonii C-113] gi|299539129|gb|ADJ27446.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosococcus watsonii C-113] Length = 483 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 225/472 (47%), Positives = 324/472 (68%), Gaps = 10/472 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E L++++ S+ EL Y++ IE N +N++I V ++A A+ +D + +G+ Sbjct: 5 SLAELASALKAREFSSEELTQHYLKRIEQLNENLNSFITVSTEEALKQAKAADAILQSGE 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + GIP+ KD F T G+ T S +LD F Y++TV + GAVMLGK NMDEF Sbjct: 65 GSPITGIPLAHKDIFCTSGVKTSCGSKMLDNFTAPYDATVVSRFKTAGAVMLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNETS+YGP +PW + D+ PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 125 AMGSSNETSFYGPAKNPW----AHDR-VPGGSSGGSAAAVAARLTPAATGTDTGGSIRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ++ G G+KPTYGR SR G+I+FA SLDQ G + RT +D+A+LL +AG+DE D+T V Sbjct: 180 SALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMARTAQDAALLLNTMAGFDERDSTSVE 239 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY +L++SI+G+ +G+PKEY + L+P I + I + GA+I EISLP+T Sbjct: 240 QDVPDYTLSLEESIEGIKIGLPKEYFAENLNPNIAIPIEAAIKEFERLGAQIHEISLPNT 299 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + A+P YY+++PAE SSNL+RYDG R+G R + KD+L++Y +R FG EVK RI+IG Sbjct: 300 ELAVPTYYVVAPAECSSNLSRYDGARFGYRCDNPKDLLDLYCRSRGESFGPEVKRRILIG 359 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TYVLS+ YD++YL+A+K+R LI DF +AF + VD+I+ PT+PT AF LG++ ++ +M Sbjct: 360 TYVLSAGYYDAYYLKAQKLRRLISNDFKQAFTE-VDIIMGPTSPTPAFQLGEKSDDPVAM 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 D++T+ VN+AGLPA+S+PA + +P+GLQ+IG F E L ++ Sbjct: 419 --YLADIYTINVNLAGLPALSIPAGFAQ-GLPIGLQIIGNYFSEARLLNLAH 467 >gi|292490698|ref|YP_003526137.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Nitrosococcus halophilus Nc4] gi|291579293|gb|ADE13750.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosococcus halophilus Nc4] Length = 483 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/476 (47%), Positives = 324/476 (68%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E L++++ S+ EL Y++ IE + +N++I V A++A A+ +D + Sbjct: 1 MHHKSLAELARALKAREFSSEELTQHYLKRIEQLDENLNSFISVSAEEALQQAKAADTLL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G+ + GIP+ KD F T G+ T S +LD F Y++TV +L GA+MLGK N Sbjct: 61 HSGEGNAMTGIPLAHKDIFCTAGMKTSCGSKMLDNFIAPYDATVVSRLKAAGAIMLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETS+YGPV +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSSNETSFYGPVKNPW-----AHERVPGGSSGGSAAAVAAKLSPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G G+KPTYGR SR G+I+FA SLDQ G + + +D A+LL A+AG+D D+ Sbjct: 176 IRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMAHSAQDVALLLNAMAGFDPSDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V VPDY +L++SI+G+ +G+PKEY + L P I T I + GA+I EIS Sbjct: 236 TSVVQEVPDYTLSLEESIEGIKIGLPKEYFGEGLDPNIAATIDAAIKEFEGLGAQIREIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+T+ A+P YY+++PAE SSNL+RYDGVR+G R KD+L++Y +R GFG EVK R Sbjct: 296 LPNTELAVPTYYVVAPAECSSNLSRYDGVRFGYRCHNPKDLLDLYCRSRGEGFGPEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTYVLS+ YD++YL+A+K+R LI DF AF + VDVI+ PT+PT AF LG++ ++ Sbjct: 356 ILIGTYVLSAGYYDAYYLKAQKLRRLISDDFKRAFTE-VDVIMGPTSPTPAFQLGEKTDD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +M D++T++ N+AGLPA+S+PA + +P+GLQ+IG F E L ++ Sbjct: 415 PVAM--YLADIYTISTNLAGLPALSIPAGFTQ-GLPVGLQIIGNYFSEAHLLNIAH 467 >gi|120555641|ref|YP_959992.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinobacter aquaeolei VT8] gi|166217680|sp|A1U486|GATA_MARAV RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|120325490|gb|ABM19805.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Marinobacter aquaeolei VT8] Length = 485 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 321/476 (67%), Gaps = 6/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+E L S IS+VEL ++ ++ + + N++I + ++A A A +D+ G Sbjct: 5 SVAELSRELESGRISSVELTQQFLDRLKTEDGKYNSFITISDEQALAEARAADEMRAAGK 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A G+P KD F T GI T S +LD F P Y++TVT GAV LGK NMDEF Sbjct: 65 ATVWTGVPFAHKDIFCTSGIRTSCGSKMLDNFVPPYDATVTANFKAAGAVCLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE+S+YG V +PW + DK PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 125 AMGSSNESSFYGAVTNPW-GLSGGDKRVPGGSSGGSAAAVAARLVPAATGTDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G+KPTYGR SR G+I+FA SLDQ G + RT D+A++L +AG+D D+TC++ Sbjct: 184 AALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMARTAEDAALMLNVMAGHDPKDSTCID 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY L++ ++G+ +G+PKEY D L+P +++ + I + GA + E+SLP+ Sbjct: 244 REVPDYTATLNEPLKGLKIGLPKEYFSDQLAPAMEEQVRNAIREYEKLGATVKEVSLPNA 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ AYY+I+PAEAS+NL+R+DGVRYG R E KD+++MY +R+ GFG EVK RI++G Sbjct: 304 KLAIAAYYVIAPAEASANLSRFDGVRYGYRCEDPKDLMDMYTRSRAEGFGNEVKRRILVG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +Y LS+ +D++YL+A+K+R LI++DF AF++ VDV+++P +PT AF G E N+ + Sbjct: 364 SYALSAGYFDAYYLKAQKVRRLIQQDFINAFKE-VDVLMSPVSPTPAFRQG--EKNTDPV 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DVFT+A+N+AG+PA+SVPA + +P+GLQ+IG F E L + ++ Sbjct: 421 SMYLEDVFTIAINLAGIPAMSVPAGFVD-GLPVGLQIIGDYFSEARLLNAAHQFQQ 475 >gi|319638538|ref|ZP_07993300.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa C102] gi|317400287|gb|EFV80946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa C102] Length = 482 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/474 (46%), Positives = 302/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK ISAVEL Y+ AI N +N Y+ + K A A+ +D RI G+A Sbjct: 6 LKQASSLLQSKQISAVELATEYLAAIAAKNPAINGYVTIDQDKTLAEAKAADARIAAGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPVAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A +A L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNL-----EHVPGGSSGGSAAVIAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++G+ +G+PKEY + + Q I LK GA+ VE+SLP T Sbjct: 241 DKEDYTRDLDKPLKGLKIGLPKEYFGEGADADVQTALQNVIDLLKAQGAETVEVSLPQTS 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+R+DGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRFDGVRYGHRAAQFGDLEEMYSNTRAKGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFGQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSANGLPIGVQFIGNYFSEAKILGAAHQVQ 471 >gi|325294685|ref|YP_004281199.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065133|gb|ADY73140.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfurobacterium thermolithotrophum DSM 11699] Length = 487 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/485 (47%), Positives = 327/485 (67%), Gaps = 12/485 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK- 61 EL ++ E D ++ K++ E+++ + I+ + ++NAYI V +KAR AE +D+ Sbjct: 2 ELINKSLKELNDLIKKKEVKPSEILEELLSRIKETEPKLNAYITVTEEKARKKAEIADRE 61 Query: 62 --RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ + +L GIP+ IKD + + S IL+ F Y++TV ++L + GA+ + Sbjct: 62 LEKLQPDEIPELFGIPLSIKDNINVENVRMTCASKILENFISPYDATVIKRLREKGAIFV 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETSY+GP +PW + PGGSSGGS+AAV+ AS+G+D Sbjct: 122 GKNNLDEFAMGSSTETSYFGPTKNPWDL-----ERVPGGSSGGSAAAVSARSAIASLGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G VG+KPTYGR SR G+ +FA SLDQ G IT+TV D+A L+ I+G D Sbjct: 177 TGGSIRQPAALCGVVGLKPTYGRVSRYGLTAFASSLDQIGPITKTVEDAAYLMNIISGQD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT LPVP++ L+ I+G+ G+PKEY ++ + P + + + L+ G +I Sbjct: 237 SKDATSARLPVPNFLENLNNEIKGLKAGLPKEYFVEGIEPEVKEKVLDVVRKLESLGVEI 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 EISLP+T+YA+ YYII+PAEASSNL R+DGVRY R + +++++MY TR+ GFG E Sbjct: 297 EEISLPNTKYAVETYYIIAPAEASSNLGRFDGVRYTYRAKNYENLIDMYCKTRAEGFGDE 356 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD++YL+A+K+RTLI + F +AFE+ VD I+TP +PT+AF LG Sbjct: 357 VKRRIMIGTYTLSAGYYDAYYLKAQKVRTLIYQGFEKAFEK-VDFIVTPVSPTTAFRLG- 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E S + +D+FT+AVN+AGLPAIS+P K +P+GLQ+IG+ F E T+ +V Sbjct: 415 -EKTSDPIKMYLSDIFTIAVNLAGLPAISIPCGFDSKNLPIGLQIIGKAFDEVTILNVAN 473 Query: 479 IIEKE 483 I+EKE Sbjct: 474 ILEKE 478 >gi|73749019|ref|YP_308258.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides sp. CBDB1] gi|109829693|sp|Q3ZYM5|GATA_DEHSC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|73660735|emb|CAI83342.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides sp. CBDB1] Length = 486 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 312/483 (64%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +++S L+ + IS+ EL ++++ IE ++ A++ V + A + AE +D Sbjct: 1 MTDLVKLTIAQSHKLLKDRKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K I GD R L GIP+ +KD TKGI T S +L+ F P Y + V KL GAV+LG Sbjct: 61 KAIKQGDIRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW +TDK PGGSSGGS+A VA S+G+DT Sbjct: 121 KTNMDEFAMGSSTENSAYFTTRNPW----NTDK-VPGGSSGGSAACVAASEAVFSLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G KP+YG SR G+++FA SLDQ G T+ D A+++ AIAG+D+ Sbjct: 176 GGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDD 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI- 299 D+T V VPD+ LD +I+G +G+PKEY + P I + + L GA I Sbjct: 236 RDSTSVPQTVPDFNSGLDGNIKGFKLGVPKEYFSQNMRPDITEKINDALGVLSGLGASID 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E+SLPHT YAL YYI++P+EAS+NL+RYDGV+YG + +++ E E TR+ GFG E Sbjct: 296 REVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGSE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD+ Y++A+K+RTLI ++F AFE+ D ++TPTTP F +G+ Sbjct: 356 VKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEK-YDALITPTTPNLPFSIGE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N+ M D T+ +N+AGLPA+S+PA + +P+GLQ+IG+PF ++T+ + Sbjct: 415 KLNDPFEM--YMCDTCTIPINIAGLPAVSIPAGFVD-GLPVGLQIIGKPFADQTIMRIAH 471 Query: 479 IIE 481 + Sbjct: 472 AFQ 474 >gi|311067143|ref|YP_003972066.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus atrophaeus 1942] gi|310867660|gb|ADP31135.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus atrophaeus 1942] Length = 485 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 232/485 (47%), Positives = 329/485 (67%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+IS +LVD + I+ + ++ A++++ +KARA A+E D+ + D+ Sbjct: 8 ITELKQLIHKKEISISDLVDQSYKRIQEVDGKVQAFLQLDEEKARAYAKELDEAV---DS 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV Q+L D AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S + P +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSGFKPTKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITR+V D+A LL+AI+G D+ DAT Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRSVEDNAFLLQAISGVDKMDAT 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+G+ + +PKEY + + ++ + L+ GA E+SL Sbjct: 240 SANVDVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEAKESVLAALKVLEGLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D +L++Y+ TRS GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLLDLYKQTRSEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF LG EN Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKLG--ENTK 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP L + +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGLAD-GLPLGLQIIGKHFDESTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|254447809|ref|ZP_05061274.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [gamma proteobacterium HTCC5015] gi|198262589|gb|EDY86869.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [gamma proteobacterium HTCC5015] Length = 484 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 226/482 (46%), Positives = 320/482 (66%), Gaps = 10/482 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E L D ++VEL ++ I+ N+++NA++ V A+ A A +D G Sbjct: 5 SIAEMSQGLERGDFTSVELTQHFLDRIDEHNAEINAFVTVTAELALEQARNADAVRAAGQ 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+P KD F T G+ T S +LD F Y++ V +++ + G VMLGKLNMDEF Sbjct: 65 AGPLTGVPFAHKDIFCTDGVRTSCASKMLDPFVAPYDAAVVERMREAGMVMLGKLNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNETSYYGPV +PW + + PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 125 AMGSSNETSYYGPVKNPWDT-----ERVPGGSSGGSAAAVAARLVPAATGTDTGGSIRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G+KPTYGR SR G+I+FA SLDQAG R+ D A LL A+AG+DE D+TC N Sbjct: 180 AAFCNLTGLKPTYGRVSRYGMIAFASSLDQAGPFGRSAEDCAYLLSAMAGHDERDSTCAN 239 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 PVPDY ALDQ ++G+ VG+PKE+ + + +I ++ I + GA+IVE+SLP+ Sbjct: 240 EPVPDYIGALDQPLKGIKVGLPKEFFGEEMPASIRESVDAAIEVYRAQGAEIVEVSLPNA 299 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 ++P YY+++PAE SSNL+R DGVR+G R E KD+ ++Y +R+ GFG EVK RIM+G Sbjct: 300 HLSVPVYYVVAPAECSSNLSRMDGVRFGHRCEDPKDLQDLYTRSRAEGFGDEVKRRIMVG 359 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 Y LS+ YD++YL+A+++R LI DF +AFEQ VD +L+PT P +AF G++ ++ SM Sbjct: 360 AYALSAGYYDAYYLKAQQLRQLISDDFKKAFEQ-VDFLLSPTAPETAFKFGEKGDDPVSM 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T+AVN+AG+PA+S+P + +P+G+QLIG F E L + + Y Sbjct: 419 --YLSDIYTIAVNLAGVPALSMPGQTVD-GLPVGIQLIGNYFDEARLLAAAHQFQLATDY 475 Query: 487 FR 488 + Sbjct: 476 HK 477 >gi|311695348|gb|ADP98221.1| glutamyl-tRNA (Gln) amidotransferase A subunit [marine bacterium HP15] Length = 485 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 219/476 (46%), Positives = 326/476 (68%), Gaps = 6/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+E L S IS+VEL ++ I+ +S+ N++I V ++A A A +D++ G+ Sbjct: 5 SVAELSRELESGKISSVELTQEFLDRIKREDSKYNSFITVTEEQALADARVADEQRAAGN 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A G+P KD F T G+ T S +L+ F P Y++TVT + GAV LGK NMDEF Sbjct: 65 ATPWTGVPFAHKDIFCTNGVRTTCGSKMLENFVPPYDATVTANFREAGAVCLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+G V +PW + +K PGGSSGGS+AAVA L A+ TDTGGSIRQP Sbjct: 125 AMGSSNENSYFGAVTNPW-GLSEGNKRVPGGSSGGSAAAVAARLIPAATATDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G+KPTYGR SR G+I+FA SLDQ G + RT D+A++L +AG+D D+T ++ Sbjct: 184 AALCGVTGLKPTYGRVSRYGMIAFASSLDQGGTMARTAEDNALMLNVMAGFDPKDSTSID 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY L++ ++G+ +G+P+EY D LSP +++ + + + GA + E+SLP+ Sbjct: 244 REVPDYTATLNEPLKGLRIGLPREYFSDQLSPAMEQQVRNAVKEYEKLGATVKEVSLPNA 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ AYY+I+PAEAS+NL+R+DGVRYG R E KD++++Y +R+ GFG+EVK RI++G Sbjct: 304 KLAIAAYYVIAPAEASANLSRFDGVRYGYRCENPKDLMDLYTRSRAEGFGEEVKRRILVG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ +D++YL+A+K+R LI++DF AF++ VDV+++PTTP+ AF G++ ++ +M Sbjct: 364 TYALSAGYFDAYYLKAQKVRRLIQQDFINAFKE-VDVLMSPTTPSPAFIQGEKTSDPVTM 422 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DVFT+A+N+AG+PA+SVPA + +P+GLQ+IG F E L + ++ Sbjct: 423 --YLEDVFTIAINLAGVPAMSVPAGFVD-GLPVGLQIIGDYFSEARLLNAAHQFQQ 475 >gi|289433014|ref|YP_003462887.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Dehalococcoides sp. GT] gi|288946734|gb|ADC74431.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides sp. GT] Length = 486 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 311/483 (64%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +++S L+ IS+ EL ++++ IE ++ A++ V + A + AE +D Sbjct: 1 MTDLVKLTIAQSHKLLKDHKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K I GD R L GIP+ +KD TKGI T S +L+ F P Y + V KL GAV+LG Sbjct: 61 KAIKQGDIRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW +TDK PGGSSGGS+A VA S+G+DT Sbjct: 121 KTNMDEFAMGSSTENSAYFTTRNPW----NTDK-VPGGSSGGSAACVAASEAVFSLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G KP+YG SR G+++FA SLDQ G T+ D A+++ AIAG+D+ Sbjct: 176 GGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDD 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI- 299 D+T V VPD+ LD +I+G +G+PKEY + P I + + L GA I Sbjct: 236 RDSTSVPQTVPDFSSGLDGNIKGFKLGVPKEYFSQNMRPDITEKINDALGVLSGLGASID 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E+SLPHT YAL YYI++P+EAS+NL+RYDGV+YG + +++ E E TR+ GFG E Sbjct: 296 REVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGSE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD+ Y++A+K+RTLI ++F AFE+ D ++TPTTP F +G+ Sbjct: 356 VKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEK-YDALITPTTPNLPFSIGE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N+ M D T+ +N+AGLPA+S+PA + +P+GLQ+IG+PF ++T+ + Sbjct: 415 KLNDPFEM--YMCDTCTIPINIAGLPAVSIPAGFVD-GLPVGLQIIGKPFADQTIMRIAH 471 Query: 479 IIE 481 + Sbjct: 472 AFQ 474 >gi|261380503|ref|ZP_05985076.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria subflava NJ9703] gi|284796756|gb|EFC52103.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria subflava NJ9703] Length = 482 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/474 (46%), Positives = 302/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK ISAVEL Y+ AI N +N Y+ + K A A+ +D RI G+A Sbjct: 6 LKQASSLLQSKQISAVELATEYLAAIAAKNPAINGYVTIDQDKTLAEAKAADARIAAGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPVAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A +A L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNL-----EHVPGGSSGGSAAVIAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++G+ +G+PKEY + + Q I LK GA+ VE+SLP T Sbjct: 241 DKEDYTRDLDKPLKGLKIGLPKEYFGEGADADVQTALQSVIDLLKAQGAETVEVSLPQTS 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+R+DGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRFDGVRYGHRAAQFGDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFGQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSANGLPIGVQFIGNYFSEAKILGAAHQVQ 471 >gi|302389230|ref|YP_003825051.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermosediminibacter oceani DSM 16646] gi|302199858|gb|ADL07428.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermosediminibacter oceani DSM 16646] Length = 482 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 242/495 (48%), Positives = 327/495 (66%), Gaps = 28/495 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEE 58 +L + V E+R+ L ++IS+ EL + ++ I+ ++ A++ + + +R EE Sbjct: 2 KLYELTVHEARELLSKREISSEELTKAVLERIDQVEEKIRAFLTIDREGALEMSRKIDEE 61 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +D +R L GIP IKD TK + T S IL F P Y++TV++KL + AV+ Sbjct: 62 ADF------SRTLAGIPGAIKDNICTKNLKTTCASKILGNFIPPYDATVSKKLKADNAVI 115 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S + +PW + PGGSSGGS+AAVA C ++G+ Sbjct: 116 LGKTNMDEFAMGSSTENSGFFITRNPWDL-----ERVPGGSSGGSAAAVAAGECIFALGS 170 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPAS+ G VG+KPTYGR SR G++++A SLDQ G IT+ V D AI+L AI+G+ Sbjct: 171 DTGGSIRQPASYCGVVGLKPTYGRVSRYGLVAYASSLDQIGTITKDVTDCAIVLNAISGW 230 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI----SWLKD 294 DECD+T VN+PVPDY +L ++GM +G+PKEY L IDK ++ + + Sbjct: 231 DECDSTSVNMPVPDYTESLVADVKGMKIGLPKEY----LGEGIDKEVREAVLAAARTFES 286 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSI 353 GA EISLPHT+YAL AYYII+PAEASSNLARYDG+RYG+R V+ D++++Y+ TRS Sbjct: 287 LGAVCEEISLPHTEYALWAYYIIAPAEASSNLARYDGIRYGVRAVDYDDLIDLYKKTRSE 346 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LSS YD++YL+A+K+RTL+KRDF AFE+ DVI++PT PT+A Sbjct: 347 GFGPEVKRRIMLGTYALSSGYYDAYYLKAQKVRTLVKRDFDMAFEK-YDVIISPTAPTAA 405 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F +G E + +DV T+ VNMAGLPAISVP MP+GLQ+IG+ F E T+ Sbjct: 406 FRIG--EKTGDPLKMYMSDVCTIPVNMAGLPAISVPCGF-SNGMPVGLQIIGKAFDEATI 462 Query: 474 FSVGQIIEKEAGYFR 488 E+ Y R Sbjct: 463 IRAAYTFEQATDYHR 477 >gi|86160604|ref|YP_467389.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaeromyxobacter dehalogenans 2CP-C] gi|109829549|sp|Q2IH94|GATA_ANADE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|85777115|gb|ABC83952.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Anaeromyxobacter dehalogenans 2CP-C] Length = 492 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/486 (48%), Positives = 331/486 (68%), Gaps = 11/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E+ + +K IS+ ELV++ + I+ ++ ++ A++ V A +ARAAA+ +D R Sbjct: 7 ELCRLGLREAGAGVAAKAISSTELVEASLARIQATDGKLGAFLAVCADRARAAAKAADAR 66 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ R +L+G+P+ +KD F TKG+ T A S IL+G+ P Y++TV ++L GAV++GK Sbjct: 67 AARGERRSELDGVPVAVKDLFVTKGVPTTAGSRILEGYLPPYDATVVERLEAAGAVIVGK 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSNE S Y P +PW TPGGSSGGS+A+VA AS+GTDTG Sbjct: 127 LNMDEFAMGSSNENSAYKPCHNPWDL-----SRTPGGSSGGSAASVAAGQVHASLGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR+PA+F G VG+KPTYGR SR G+++FA SLDQ G + R V D+A++L+ IAG+D Sbjct: 182 GSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPR 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T PV DY L++ +G+ VG+P+E+ L ++ + + + GA +V+ Sbjct: 242 DMTSSTRPVDDYLGPLEEGARGLRVGVPREWLSGGLDAGVEAAIRAALDTYRRLGATLVD 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 +SLPH++Y + AYY+I+PAEASSNLARYDGVRYGLR EG K + EMY +R G G E K Sbjct: 302 VSLPHSKYGIGAYYLIAPAEASSNLARYDGVRYGLRAEGAKGLKEMYAESREQGLGAEPK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++YLRA+K+RTLI+RDF EAF +G DVI P TP+ AF LG+ Sbjct: 362 RRIMLGTYALSSGYYDAYYLRAQKVRTLIRRDFDEAF-RGCDVIAGPVTPSVAFALGERT 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQI 479 + M D+FT+ N+A LP +SVP L +P+GLQL+G+PF E TLF + Sbjct: 421 GDPLQM--YLADIFTITCNLAALPGLSVPCGLEAASGLPVGLQLVGRPFDEATLFRAARA 478 Query: 480 IEKEAG 485 +E+E G Sbjct: 479 LERELG 484 >gi|83647999|ref|YP_436434.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Hahella chejuensis KCTC 2396] gi|109829823|sp|Q2SBG5|GATA_HAHCH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|83636042|gb|ABC32009.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hahella chejuensis KCTC 2396] Length = 484 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 233/471 (49%), Positives = 313/471 (66%), Gaps = 10/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE LR K S+ E+ Y+ I+ N ++N +I V A + AE++D R+ G Sbjct: 6 ISEIISGLRDKQFSSREITQDYLARIKRLNPELNCFITVTEDLALSQAEQADARLNAGQT 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F T+G+ T S +L+ F P YESTVT+K D GAV LGK NMDEFA Sbjct: 66 SVLNGVPLAHKDVFCTEGVTTTCGSRMLEKFVPPYESTVTRKFIDAGAVTLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE SY+GPV +PW + + PGGSSGGS+AAVA LCAA+ GTDTGGSIRQPA Sbjct: 126 MGSSNENSYFGPVRNPWDT-----ERAPGGSSGGSAAAVAAGLCAAATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G G+KPTYGR SRLG+++FA SLDQ G RT D+A+LL +AG+D D+T Sbjct: 181 AFCGLTGLKPTYGRVSRLGMVAFASSLDQGGPFARTAEDAALLLNVMAGHDPMDSTSALN 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P DY AL Q + G+T+G+PKEY + L+ ++K Q+ I + GA E+SLPHT+ Sbjct: 241 PTEDYTSALAQPLAGVTIGLPKEYFSNQLNAEVEKALQEAIKVYESLGASFKEVSLPHTE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+I+PAE S+NL+R+DGVRYG R E KD+ ++Y+ +RS GFG EVK RI+IGT Sbjct: 301 LSVPAYYVIAPAECSTNLSRFDGVRYGHRCENPKDLEDLYQRSRSEGFGDEVKRRILIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++Y +A+KIR LIK DF A + VD +L PTTP AF LG E S + Sbjct: 361 YALSAGYYDAYYRQAQKIRRLIKNDFVSALNE-VDALLCPTTPDVAFRLG--EKTSDPVQ 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 D+FT+ ++AGLPA+ +P + +P+G+QLIG F E L ++G Sbjct: 418 MYLEDIFTIPASLAGLPALGLPCGF-KGGLPVGMQLIGNYFTEARLLNLGH 467 >gi|238855399|ref|ZP_04645710.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Lactobacillus jensenii 269-3] gi|260665360|ref|ZP_05866208.1| glutamyl-tRNA(Gln) amidotransferase subunit A protein [Lactobacillus jensenii SJ-7A-US] gi|282932090|ref|ZP_06337547.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus jensenii 208-1] gi|313473073|ref|ZP_07813557.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus jensenii 1153] gi|238831997|gb|EEQ24323.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Lactobacillus jensenii 269-3] gi|239528699|gb|EEQ67700.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus jensenii 1153] gi|260560864|gb|EEX26840.1| glutamyl-tRNA(Gln) amidotransferase subunit A protein [Lactobacillus jensenii SJ-7A-US] gi|281303769|gb|EFA95914.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus jensenii 208-1] Length = 479 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/475 (48%), Positives = 320/475 (67%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S ++ A +L D I+ I+ ++ +NA+I V + A+A+ +N A L GI Sbjct: 14 KLASGEVDAQKLADETIENIKATDKDINAFI-TVDEDAKASEN------LNF-ANKLAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD T G+ T A SHILD F P Y++TV KL D GA ++GK N+DEFAMGSSNE Sbjct: 66 PVAIKDNIVTNGLKTTAASHILDNFIPVYDATVVSKLKDAGATIIGKTNLDEFAMGSSNE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G V +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 126 NSYFGAVHNPW----NLDK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+FA SLDQ G++T+ V+D+A +L I+G DE D+T VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFASSLDQIGVLTKRVKDAAEVLNVISGADEHDSTVSEKAVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL Q ++G+ V +PKEY D + + K Q I +LK+ GA I E+SLPHT+Y +P Y Sbjct: 241 KALGQDVKGLRVAVPKEYMSDAVDEGVRKAVQAQIDYLKENGAIINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG+EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGEEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI RDF + FE DVI+ PTT AF +G E + M + ND+ Sbjct: 361 SYDKFFRQASKVRTLICRDFDKIFEDN-DVIVGPTTTEPAFEIGSEVKDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ NM+G+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTISANMSGVPAASVPAGLVD-GMPVGLQIMAKRFDEESVFRVADFIERNNKFYE 471 >gi|225075633|ref|ZP_03718832.1| hypothetical protein NEIFLAOT_00649 [Neisseria flavescens NRL30031/H210] gi|224953055|gb|EEG34264.1| hypothetical protein NEIFLAOT_00649 [Neisseria flavescens NRL30031/H210] Length = 482 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 220/474 (46%), Positives = 302/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK ISAVEL Y+ AI N +N Y+ + K A A+ +D RI G+A Sbjct: 6 LKQASSLLQSKQISAVELATEYLAAIAAKNPAINGYVTIDQDKTLAEAKAADARIAAGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPVAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG + +PW + PGGSSGGS+A +A L A++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGAIKNPWNL-----EHVPGGSSGGSAAVIAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +Y R LD+ ++G+ +G+PKEY + + Q I LK GA+ VE+SLP T Sbjct: 241 DKEEYTRDLDKPLKGLKIGLPKEYFGEGADADVQTALQSVIDLLKAQGAETVEVSLPQTS 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+R+DGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRFDGVRYGHRAAQFSDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFGQ-CDFILAPTAPTAAPKLGSNIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFGANGLPIGVQFIGNYFSEAKILGAAHQVQ 471 >gi|298492686|ref|YP_003722863.1| glutamyl-tRNA(Gln) amidotransferase subunit A ['Nostoc azollae' 0708] gi|298234604|gb|ADI65740.1| glutamyl-tRNA(Gln) amidotransferase, A subunit ['Nostoc azollae' 0708] Length = 486 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/480 (49%), Positives = 318/480 (66%), Gaps = 13/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L K+ SAVE+ + I+ S++++++ V AQ+A A D +I G+ Sbjct: 3 SIRELHTQLVKKERSAVEITQEALDRIQALESKLHSFLTVTAQQALEQASAVDAKIAAGE 62 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD TKGI T S IL+ F P YESTVTQKL + GAVM+GK N+DE Sbjct: 63 EIGILAGIPIGIKDNICTKGIRTTCASRILENFVPPYESTVTQKLANAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW PGGSSGGS+AAVA C S+G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQVTANPWDI-----SRIPGGSSGGSAAAVAAEECVVSLGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G R+V D+AILL IAGYD D+T + Sbjct: 178 PASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFGRSVEDTAILLNVIAGYDPQDSTSL 237 Query: 247 NLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + +PDY +L ++ + +G+ KE + L P ++ + I+ L+ GA+I IS Sbjct: 238 KVEIPDYAASLTPDLKAGKKLKIGVIKETFSEGLDPEVEAAVKNAITELETLGAEIHYIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P +Y LP+YYII+P+EAS+NLARYDGV+YGLR D +L MY +TR++GFG EVK R Sbjct: 298 CPRFRYGLPSYYIIAPSEASANLARYDGVKYGLRSPDADNVLSMYTSTRALGFGTEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK DF AF+Q VDV++ PT PT+AF +G++ + Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKVRTLIKEDFGTAFQQ-VDVLICPTAPTTAFQVGEKITD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM ND+ T+ VN+AGLP ISVP K +P+GLQLIG+ RE+ L V E+ Sbjct: 417 PLSM--YLNDLMTIPVNLAGLPGISVPCGFDSKGLPIGLQLIGKVLREDQLLQVAYSYEQ 474 >gi|77166094|ref|YP_344619.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrosococcus oceani ATCC 19707] gi|254435539|ref|ZP_05049046.1| Amidase, putative [Nitrosococcus oceani AFC27] gi|109891962|sp|Q3J7V7|GATA_NITOC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|76884408|gb|ABA59089.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nitrosococcus oceani ATCC 19707] gi|207088650|gb|EDZ65922.1| Amidase, putative [Nitrosococcus oceani AFC27] Length = 483 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/476 (47%), Positives = 325/476 (68%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E L++++ S+ EL Y++ IE N +N++I V ++A A+ +D + Sbjct: 1 MHHKSLAELASALKAREFSSEELTQHYLKRIERLNEDLNSFITVSTEEALKQAKAADAIL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G+ + GIP+ KD F T G+ T S +LD F Y +TV +L GAVMLGK N Sbjct: 61 QSGEGSSITGIPLAHKDIFCTTGVKTSCGSKMLDNFTAPYNATVVSRLKTAGAVMLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETS+YG V +PW + D+ PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSSNETSFYGSVKNPW----AHDR-VPGGSSGGSAAAVAARLTPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G G+KPTYGR SR G+I+FA SLDQ G + RT +D+A+LL +AG+DE D+ Sbjct: 176 IRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMARTAQDAALLLNVMAGFDERDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V VPDY +L++SI+G+ +G+P EY + L+P I + I + GA+I EIS Sbjct: 236 TSVAQDVPDYTLSLEESIKGIKIGLPTEYFDENLNPGIAIPIEAAIKEFERLGAQIREIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+T+ A+P YY+++PAE SSNL+RYDG R+G R + KD+LE+Y +R GFG EVK R Sbjct: 296 LPNTKLAVPTYYVVAPAECSSNLSRYDGTRFGYRCDNPKDLLELYCRSRGEGFGPEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTYVLS+ YD++YL+A+K+R LI DF +A + VDVI+ PT+PT AF LG++ ++ Sbjct: 356 ILIGTYVLSAGYYDAYYLKAQKLRRLISDDFKQALTE-VDVIMGPTSPTPAFRLGEKSDD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +M D++T+ VN+AGLPA+S+PA + +P+GLQ+IG F E L ++ Sbjct: 415 PVAM--YLADIYTINVNLAGLPALSIPAGFAQ-GLPVGLQIIGNYFSESRLLNLAH 467 >gi|282901220|ref|ZP_06309149.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Cylindrospermopsis raciborskii CS-505] gi|281193920|gb|EFA68888.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Cylindrospermopsis raciborskii CS-505] Length = 520 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/483 (49%), Positives = 320/483 (66%), Gaps = 12/483 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ ++ + +L SK+ SA+E+V Y++ I ++++++ + A+ A A A D +I Sbjct: 33 LSMPSIRQLHQQLVSKERSAIEIVQDYLERIHLLEPKLHSFLNITAEHALAQAGNVDGKI 92 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+ L GIPIG+KD TKGI T S IL+GF P YESTVTQKL GAV +GK Sbjct: 93 ASGEEISILAGIPIGVKDNLCTKGIVTTCGSKILEGFIPPYESTVTQKLNQMGAVTVGKT 152 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S Y +PW SSGGS+AAVA C S+G+DTGG Sbjct: 153 NLDEFAMGSSTENSAYQTTANPWDISTVPGG-----SSGGSAAAVAAAECVVSLGSDTGG 207 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G VG+KPTYG SR G++++A SLDQ G RTV D+AILL AIAGYD D Sbjct: 208 SIRQPASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFGRTVEDAAILLNAIAGYDPHD 267 Query: 243 ATCVNLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 +T + + +PDY L D + + VG+ +E + L + Q I+ L+D G +I Sbjct: 268 STSLKVEIPDYTANLTSDLKRKKLKVGVIRETFGEGLDEEVSSAVNQAIAQLRDLGVEIQ 327 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEV 359 EIS P +Y +P+YYII+P+EAS+NLARYDGV+YG+R + D +L MY TR+IGFG EV Sbjct: 328 EISCPRFRYGVPSYYIIAPSEASANLARYDGVKYGIRAQDPDNLLSMYNRTRAIGFGPEV 387 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIMIGTY LS+ YD++YL+A+K+RTLIK DF +AF + VDV+LTPT PT+AF G++ Sbjct: 388 KRRIMIGTYALSAGYYDAYYLKAQKVRTLIKEDFEQAFTK-VDVLLTPTAPTTAFKAGEK 446 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + SM ND+ T+ VN+AGLPAISVP K +P+G+QLIG+ RE+ LF V Sbjct: 447 ITDPLSM--YLNDLMTIPVNLAGLPAISVPCGFDSKGLPIGMQLIGKVLREDQLFQVAYA 504 Query: 480 IEK 482 E+ Sbjct: 505 YEQ 507 >gi|29654765|ref|NP_820457.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Coxiella burnetii RSA 493] gi|153209976|ref|ZP_01947549.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154706862|ref|YP_001423932.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Coxiella burnetii Dugway 5J108-111] gi|161830742|ref|YP_001597314.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Coxiella burnetii RSA 331] gi|165924158|ref|ZP_02219990.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Coxiella burnetii RSA 334] gi|212212162|ref|YP_002303098.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Coxiella burnetii CbuG_Q212] gi|212219198|ref|YP_002305985.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Coxiella burnetii CbuK_Q154] gi|39931505|sp|Q83BM9|GATA_COXBU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189045245|sp|A9KBI0|GATA_COXBN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189045246|sp|A9N8Z4|GATA_COXBR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485894|sp|B6J4H5|GATA_COXB1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485895|sp|B6IZ25|GATA_COXB2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|29542033|gb|AAO90971.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coxiella burnetii RSA 493] gi|120575202|gb|EAX31826.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154356148|gb|ABS77610.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coxiella burnetii Dugway 5J108-111] gi|161762609|gb|ABX78251.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Coxiella burnetii RSA 331] gi|165916397|gb|EDR35001.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Coxiella burnetii RSA 334] gi|212010572|gb|ACJ17953.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coxiella burnetii CbuG_Q212] gi|212013460|gb|ACJ20840.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coxiella burnetii CbuK_Q154] Length = 483 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 236/481 (49%), Positives = 326/481 (67%), Gaps = 10/481 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + LR K IS+VEL ++ I+ N +N++I + + A A+ +D R+ G+A Sbjct: 6 IAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARLAKGEA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TK I T S +LD F Y++TV ++L GA+++GK NMDEFA Sbjct: 66 TSLTGIPIAQKDIFCTKDIKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE SY+G V +PW + PGGSSGGS+AAVA L + GTDTGGSIRQPA Sbjct: 126 MGSSNENSYFGAVKNPWDL-----ERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I+FA SLDQAG + +T D+A+LL A+AG+D D+T +N Sbjct: 181 ALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKDSTSINK 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY L S++G+ VG+PKEY + L+ +I ++ + L+ GA +EI LPHT Sbjct: 241 NVPDYTATLTTSLEGLKVGLPKEYFGEGLNSSIAESIETVKKTLEKMGATFIEIQLPHTD 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGT 367 +A PAYY+++PAE SSNLARYDGVRYG R + D+ ++Y+ +R+ GFG EVK RIMIGT Sbjct: 301 FAAPAYYVLAPAECSSNLARYDGVRYGYRCDKPVDLDDLYKRSRTEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A+KIR LI+ DF +AFE VDVILTP TPT AF L ++ + +M Sbjct: 361 YVLSAGYYDAYYLKAQKIRRLIRDDFMKAFET-VDVILTPATPTPAFKLNEKIADPVAM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 +DV+T+AVN+AGLPAI+ PA + ++P+G QLIG F E L ++ ++E + Sbjct: 419 -YLSDVYTIAVNLAGLPAIAFPAGFMD-QLPIGAQLIGNYFEEARLLNITHRYQQETDWH 476 Query: 488 R 488 + Sbjct: 477 K 477 >gi|163847274|ref|YP_001635318.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chloroflexus aurantiacus J-10-fl] gi|222525117|ref|YP_002569588.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chloroflexus sp. Y-400-fl] gi|259647206|sp|A9WCD8|GATA_CHLAA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|259647208|sp|B9LER8|GATA_CHLSY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|163668563|gb|ABY34929.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chloroflexus aurantiacus J-10-fl] gi|222448996|gb|ACM53262.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chloroflexus sp. Y-400-fl] Length = 487 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/483 (49%), Positives = 325/483 (67%), Gaps = 10/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+ + V+ ++ L + DI+AVEL ++ + I + + A++ + A AAA +D Sbjct: 1 MTELHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G + L+GIPI IKD T G+ T A S IL GFRP Y +TV ++L GAV++ Sbjct: 61 ERRQQGRSLGPLDGIPIAIKDVICTDGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN DEFAMGSS E S Y +PW D T PGGSSGGS+AAVA A++GTD Sbjct: 121 GKLNCDEFAMGSSTENSAYQITTNPW---DPTR--VPGGSSGGSAAAVAAGQVPATLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G G+KPTYGR SR G+I++ SLDQ G + TV D A+LL IAG+D Sbjct: 176 TGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + PDY AL I+G+ +GIP+EY ++ + P ++ + I L+D GA + Sbjct: 236 PRDGTSAPIDTPDYTTALTGDIRGLRIGIPREYFVEGMEPGVESATRTAIEVLRDLGAIL 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V++SLPHT+YALP YYII+PAEAS+NLAR+DGVRYG R EG+ + E E TR GFG EV Sbjct: 296 VDVSLPHTRYALPTYYIIAPAEASANLARFDGVRYGFRAEGETMWEQIEQTRGQGFGPEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RIM+GTY LS+ YD++Y RA+++RTLIKRDF + F Q VD++ PT+PT AFP+G++ Sbjct: 356 RRRIMLGTYALSAGYYDAYYRRAQQVRTLIKRDFEQVFTQ-VDLLAAPTSPTVAFPIGQK 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +DV T+ +N+AG+PA+ VP E +P+GLQLIG+PF E TL VG Sbjct: 415 INDPLAM--YLSDVCTLPINLAGVPALVVPCGFSE-GLPVGLQLIGRPFDEATLLRVGDA 471 Query: 480 IEK 482 ++ Sbjct: 472 YQR 474 >gi|40063056|gb|AAR37912.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [uncultured marine bacterium 560] Length = 480 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/476 (48%), Positives = 319/476 (67%), Gaps = 13/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ ++V+E L++K+ S+VEL Y+ I S S +NA+I V + A + A +D ++ Sbjct: 1 MHTLSVAELSKSLKNKEFSSVELTQHYLDRI--SRSDLNAFITVTDELALSQARAADVKL 58 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L GIP KD F TKG+ T A S ILD F Y++T++ KL VMLGK N Sbjct: 59 AKGSGSVLTGIPFAHKDIFCTKGVKTTAGSKILDPFISPYDATLSHKLNIENMVMLGKTN 118 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S+YGPV +PW K PGGSSGGS+AAVAG L + GTDTGGS Sbjct: 119 MDEFAMGSSNENSFYGPVKNPWNK-----KMVPGGSSGGSAAAVAGRLSPLATGTDTGGS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQP+S G GIKPTYGR SR G+I++A SLDQAG +T+T D+A++L AIAG+DE D+ Sbjct: 174 IRQPSSLCGITGIKPTYGRVSRYGMIAYASSLDQAGPMTQTAEDAALVLNAIAGFDEKDS 233 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPDY ++L SI+G+ +GIPKE+ D L +++K + + + GA++ EIS Sbjct: 234 TSALRDVPDYTKSLRDSIKGLKIGIPKEFFSDGLDSSVEKVITESMKEFESMGAELQEIS 293 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP++ YA+P YYI++P E SSNL+R DG+RYG R + KD+ ++Y +RS GFG EVK R Sbjct: 294 LPNSAYAIPTYYIVAPCECSSNLSRLDGIRYGYRCKDPKDLNDLYLRSRSEGFGDEVKRR 353 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+R LI DF +AF Q VD+I+ P +PT+AF LG ++ Sbjct: 354 IMIGTYALSAGYYDAYYLKAQKVRQLISEDFKKAF-QNVDIIMGPVSPTTAFELGAIKD- 411 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T++ N+AGLP +S+PA +P+GLQ+IG + EE L + Sbjct: 412 --PVSMYLADIYTLSANLAGLPGMSIPAGFS-NNLPVGLQMIGNYWSEEVLLNAAH 464 >gi|258591572|emb|CBE67873.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [NC10 bacterium 'Dutch sediment'] Length = 486 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/488 (47%), Positives = 326/488 (66%), Gaps = 10/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK- 61 +L + + ++ L ++ISAVELV S + I + Q+ AY V + A AE D+ Sbjct: 2 DLTQFTIHDMQELLARREISAVELVRSVLDRIGRLDGQIKAYTAVTEEAALKQAETVDRL 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R L GIP+ IKD T+G+ T S IL+ + P Y++TV ++L A++LGK Sbjct: 62 RAAGTPLPPLAGIPLAIKDVICTEGVRTTCASKILEPYVPPYDATVIRRLKAQEAILLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW ++D + PGGSSGGS+AAVA LCAAS+GTDTG Sbjct: 122 TNMDEFAMGSSTENSAFFRTRNPW-ALD----YVPGGSSGGSAAAVAADLCAASLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G G+KPTYGR SR G+++FA SLDQ G T+ +RD A++L AIAG+D Sbjct: 177 GSIRQPASFCGIAGLKPTYGRVSRYGLVAFASSLDQIGPFTKDIRDCAMMLHAIAGHDPH 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T +LPVPDY AL ++G+ +GIP +Y ++ + P ++ I L++ G + + Sbjct: 237 DSTSADLPVPDYGAALTGDVRGVRIGIPDDYFVEGMDPEVEAAVWTAIRTLEELGGRQEK 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLPHT YA+ YY+++ AEASSNLARYDGVRYG R + D+LEMY+ +R GFG EVK Sbjct: 297 VSLPHTPYAIATYYLVATAEASSNLARYDGVRYGYRTSKPADLLEMYQLSRREGFGPEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A+K+RTLI+RDF AFE +VI+TPT+PT F G++ Sbjct: 357 RRIMLGTYALSAGYYDAYYLKAQKVRTLIRRDFERAFET-CEVIVTPTSPTPPFRFGEKM 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M +D+FT++VN+AGLP IS+P + +P+GLQLIG+PF E T+ V Sbjct: 416 DDPLQM--YLSDIFTISVNLAGLPGISIPCGFTKAGLPIGLQLIGKPFDEATILKVAHAY 473 Query: 481 EKEAGYFR 488 E+ G+ R Sbjct: 474 EQATGWHR 481 >gi|78044168|ref|YP_359948.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Carboxydothermus hydrogenoformans Z-2901] gi|109829659|sp|Q3AD36|GATA_CARHZ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|77996283|gb|ABB15182.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 485 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 236/488 (48%), Positives = 325/488 (66%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +++ E +++++K+ISAVE+ + IE ++ AY+ V + A E D++ Sbjct: 2 ELYYLSAKEITEKIKAKEISAVEVAKATFDRIEAVEPKIQAYVTVTRELGLKMAREVDEK 61 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G D L G+P+ IKD +T GI T S IL+ + P Y++TV +KL + GAV GK Sbjct: 62 IARGEDPGPLAGVPVAIKDNMSTAGIRTTCSSKILENYIPPYDATVVEKLKEAGAVFTGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSS E S + P +PW + PGGSSGGS+A+VA ++G+DTG Sbjct: 122 TNLDEFAMGSSTENSRFFPTRNPWDL-----ERVPGGSSGGSAASVAAGEAVVALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G+++FA SLDQ G RTV D+A+LL IAG+D Sbjct: 177 GSIRQPAAFCGIVGLKPTYGAVSRYGLVAFASSLDQIGPFARTVEDAALLLNVIAGHDPK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T ++ PDY L+Q I+G+ +G+PKEY +D + + K I L+ GA E Sbjct: 237 DSTSADIEYPDYLSFLNQDIKGLKIGLPKEYFIDGIDAGVKKAIDDAIKVLESLGAVFEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +SLPHT+Y+LP YY+I+PAEASSNLARYDGVRYG R E +D++EM+ TR+ GFG EVK Sbjct: 297 VSLPHTKYSLPVYYLIAPAEASSNLARYDGVRYGYRDFEAEDVVEMFSRTRAEGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A K+RTLIK DF AF + VD++LTPTTPT AF G++ Sbjct: 357 RRIMLGTYALSAGYYDAYYLKALKVRTLIKEDFDRAFTK-VDLLLTPTTPTPAFKFGEKT 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D+FT+AVN+AGLP ISVPA + +P+ QLIG+PF E TL V Sbjct: 416 SDPVSM--YLSDIFTMAVNLAGLPGISVPAGF-DGHLPVSFQLIGKPFDEGTLLKVAHAF 472 Query: 481 EKEAGYFR 488 E+ + + Sbjct: 473 EQNTEFHK 480 >gi|294788517|ref|ZP_06753759.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Simonsiella muelleri ATCC 29453] gi|294483394|gb|EFG31079.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Simonsiella muelleri ATCC 29453] Length = 482 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 223/474 (47%), Positives = 302/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ + L+SK ISAVEL + Y+ AI N +N YI + K AAA ++D +I G+A Sbjct: 6 LKQASNLLQSKQISAVELANEYLTAINAQNPAINGYITLDTDKTLAAAAQADAQIAAGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G T S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPIAFKDIFCHTGWRTACASKMLDNFVAPYTATVVQNLLDAGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG +P+ T GGSSGGS+ VA L ++G+DTGGSIRQPA Sbjct: 126 MGSTNENSYYGAAKNPFNHHHVT-----GGSSGGSAVVVAARLAPVALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G G+KPTYG SR G+I++A S DQAG + +T D AILL +A +DE D+T + Sbjct: 181 SHCGITGLKPTYGVVSRFGMIAYASSFDQAGPMAQTAEDCAILLNTMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D+ R L+Q ++G+ +G+PKEY S + Q + LK GA++VE+SLP T+ Sbjct: 241 EREDFTRDLNQPLKGLKIGLPKEYFTPNNSADVQAALQNAMDLLKQQGAQLVEVSLPQTE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R E ++ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRAKEFANLDEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF+Q D+IL P PTSA L N + Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQAAFKQ-CDIILAPNAPTSAPELNSL--NQDPVQ 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+S+PA L +P+G+QLIG F E + ++ Sbjct: 418 AYLSDIYTIAVNLAGLPALSLPAGLGADGLPIGVQLIGNYFSEAKILGAAHQMQ 471 >gi|328952202|ref|YP_004369536.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfobacca acetoxidans DSM 11109] gi|328452526|gb|AEB08355.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfobacca acetoxidans DSM 11109] Length = 487 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/468 (48%), Positives = 320/468 (68%), Gaps = 9/468 (1%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 +IS VEL ++ I + ++ YI V AQ+A A A+E+ +R+ +G A L GIP+ IK Sbjct: 21 EISPVELTQGFLDRISQFDDTLHCYITVEAQQALAQAQEATRRLASGRATPLTGIPLAIK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D T+G+ T S L+ + P Y++TV +L + GAV+LGK+NMDEFAMGSS E S +G Sbjct: 81 DLIVTQGLRTTCASRSLENYVPPYDATVMHRLREAGAVILGKVNMDEFAMGSSTENSAFG 140 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PWR +D PGGSSGGS+AAVA LC AS+G+DTGGSIRQPAS G VG+KPT Sbjct: 141 ATRNPWR-LDCI----PGGSSGGSAAAVAADLCLASLGSDTGGSIRQPASHCGVVGLKPT 195 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YGR SR G+++FA SLDQ G IT+ V D A+LL+ +AGYD D+T +P PDY +AL+Q Sbjct: 196 YGRVSRFGLVAFASSLDQIGPITKDVADCALLLQFLAGYDPKDSTSAPVPTPDYSQALNQ 255 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 I+G+ +G+P+EY + + +++ + + K GA++VE+SLPHTQYA+ YY+I+ Sbjct: 256 DIKGLKIGVPQEYFIAGMEEEVEQAVRAALETFKGLGAELVEVSLPHTQYAVAVYYLIAT 315 Query: 320 AEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 AEASSNLARYDGV+YG R E D+++MY TR+ G G EV+ RIM+GTY LS+ YD++ Sbjct: 316 AEASSNLARYDGVKYGFRAAEANDLMDMYCATRAQGLGAEVRRRIMLGTYALSAGYYDAY 375 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 Y +A ++RTLI+RDF E F Q ++ TP PT+AF LG++ ++ +M +D+FT++ Sbjct: 376 YKKASQVRTLIRRDFDEVF-QTCQIVATPVAPTTAFRLGEKMDDPLTM--YLSDIFTISA 432 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 N+AG+P ISVP L +P+GLQL+ + F E TL E+ + + Sbjct: 433 NLAGIPGISVPCGLNSGGLPIGLQLLARHFDESTLLKAAHAFEQASTF 480 >gi|241759948|ref|ZP_04758048.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Neisseria flavescens SK114] gi|241319956|gb|EER56352.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Neisseria flavescens SK114] Length = 482 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 219/474 (46%), Positives = 300/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ L+SK ISAVEL Y+ AI N +N Y+ + K A A+ +D RI G+ Sbjct: 6 LKQASSLLQSKQISAVELATEYLAAIAAKNPAINGYVTIDQDKTLAEAKAADARIAAGNT 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 TALTGVPVAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NETS+YG +PW + PGGSSGGS+A +A L ++G+DTGGSIRQPA Sbjct: 126 MGSTNETSFYGATKNPWNL-----EHVPGGSSGGSAAVIAARLAPVALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G GIKPTYG SR G++++A S DQAG + +T D AILL A+A +DE D+T + Sbjct: 181 SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R LD+ ++G+ +G+PKEY + + Q I LK GA+ VE+SLP T Sbjct: 241 DKEDYTRDLDKPLKGLKIGLPKEYFDEGADTDVQTALQSVIDLLKAQGAETVEVSLPQTS 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+R+DGVRYG R + D+ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRFDGVRYGHRAAQFSDLEEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D IL PT PT+A LG + ++ M Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQTAFGQ-CDFILAPTAPTAAPKLGSDIHDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+++PA +P+G+Q IG F E + ++ Sbjct: 419 -YLSDIYTIAVNLAGLPALTLPAGFSANGLPIGVQFIGNYFSEAKILGAAHQVQ 471 >gi|261418610|ref|YP_003252292.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacillus sp. Y412MC61] gi|319765425|ref|YP_004130926.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Geobacillus sp. Y412MC52] gi|261375067|gb|ACX77810.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. Y412MC61] gi|317110291|gb|ADU92783.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. Y412MC52] Length = 485 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/483 (47%), Positives = 326/483 (67%), Gaps = 11/483 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE L+ K++S +LVD + I ++ A++ + ++ARA A+E D ++ G+ Sbjct: 7 SVSELHTLLQKKEVSISDLVDESYRRIGEVEEKVQAFLTLNEEQARAKAKELDDQLAKGE 66 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TKG+ T S IL F P Y +TV ++L GA+ +GKLNMDE Sbjct: 67 ETNPLFGLPIGIKDNIVTKGLRTTCASKILYNFDPIYHATVMERLNAAGAITIGKLNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 127 FAMGSSTENSGFQLTRNPWDL-----ERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AIAG D D+T Sbjct: 182 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAIAGVDPMDSTSA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+PVP+Y AL I+G+ + +PKEY + + + ++ ++ L+ GA E+SLPH Sbjct: 242 NVPVPNYVEALTGDIKGLKIAVPKEYLGEGVDEGVRQSVLAALAVLEKLGAAWEEVSLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+ Sbjct: 302 SKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKLTRSEGFGAEVKRRIML 361 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LSS YD++Y +A+K+RTLIKRDF FEQ DVI+ PTTPT AF +G++ N+ + Sbjct: 362 GTFALSSGYYDAYYKKAQKVRTLIKRDFENVFEQ-YDVIIGPTTPTPAFKIGEKTNDPLT 420 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ T+ VN+AG+PAISVP + +P+GLQ+IG+ F E T++ V E+ Sbjct: 421 M--YMNDILTIPVNLAGVPAISVPCGFVD-GLPVGLQIIGKHFDESTVYRVAHAFEQATD 477 Query: 486 YFR 488 Y + Sbjct: 478 YHK 480 >gi|317969747|ref|ZP_07971137.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. CB0205] Length = 486 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/481 (48%), Positives = 313/481 (65%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 M ++E RD+L+S D+SA EL D ++ IE + AY EV A++ARA A+ D R Sbjct: 1 MGIAEWRDQLKSGDVSARELTDHHLSRIEAVEPSVKAYTEVTAERARADADRIDALRASG 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ IKD T+GI T S +L+ F P YESTVT +LW GAV+LGK N+D Sbjct: 61 AELPPLAGVPLAIKDNLCTRGIRTTCSSRMLENFVPPYESTVTDRLWGAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +GP +PW +TDK PGGSSGGS+AAVA C S+G+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGPSRNPW----NTDK-VPGGSSGGSAAAVAAGECVGSLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G +V D+A LL+ IAG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFANSVSDAAELLQVIAGEDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVPDY AL Q + G+ VGI +E + + L P + + + L+ G +V++S Sbjct: 236 LKAPVPDYRAALTQPVAGLRVGIVRECFEAEGLHPEVKASVMAAAAQLEALGCDLVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + EM +R+ GFG EVK RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRAEDAASLAEMTSRSRAEGFGDEVKRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF Q VDV+LTPT+PT+AF G + Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAFGQ-VDVLLTPTSPTTAFGFGAHAEDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ NMAGLPAIS+P +P+G+QLI +EE L V E+ Sbjct: 415 LAM--YLADLLTIPANMAGLPAISLPCGFDGAGLPIGVQLITGVLQEERLLQVAYHYEQA 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|147669785|ref|YP_001214603.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Dehalococcoides sp. BAV1] gi|189045247|sp|A5FQ07|GATA_DEHSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146270733|gb|ABQ17725.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Dehalococcoides sp. BAV1] Length = 486 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 309/483 (63%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +++S L+ IS+ EL ++++ IE ++ A++ V + A + AE +D Sbjct: 1 MTDLVKLTIAQSHKLLKDHKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K I GD R L GIP+ +KD TKGI T S +L+ F P Y + V KL GAV+LG Sbjct: 61 KAIKQGDIRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW +TDK PGGSSGGS+A VA S+G+DT Sbjct: 121 KTNMDEFAMGSSTENSAYFTTRNPW----NTDK-VPGGSSGGSAACVAASEAVFSLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G KP+YG SR G+++FA SLDQ G T+ D A+++ AIAG+D+ Sbjct: 176 GGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDD 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI- 299 D+T V VPD+ LD +I+G +G+PKEY + P I + + L GA I Sbjct: 236 RDSTSVPQTVPDFSSGLDGNIKGFKLGVPKEYFSQNMRPDITEKINDALGVLSGLGASID 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQE 358 E+SLPHT YAL YYI++P+EAS+NL+RYDGV+YG +++ E E TR+ GFG E Sbjct: 296 REVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNPTENMWEAMEKTRAKGFGPE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD+ Y++A+K+RTLI ++F AFE+ D ++TPTTP F +G+ Sbjct: 356 VKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEK-YDALITPTTPNLPFSIGE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N+ M D T+ +N+AGLPA+S+PA + +P+GLQ+IG+PF ++T + Sbjct: 415 KLNDPFEM--YMCDTCTIPINIAGLPAVSIPAGFVD-GLPVGLQIIGKPFADQTTMRIAH 471 Query: 479 IIE 481 + Sbjct: 472 AFQ 474 >gi|22298546|ref|NP_681793.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermosynechococcus elongatus BP-1] gi|22294726|dbj|BAC08555.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermosynechococcus elongatus BP-1] Length = 496 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/485 (48%), Positives = 317/485 (65%), Gaps = 11/485 (2%) Query: 1 MSELNFMAVSESRDR-LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 + E FM+V + R L K+ SA E+ +Y+ I +++++ V +A A A E Sbjct: 9 IGEAAFMSVIQELHRQLVRKERSATEITQAYLDRIAQVEPTLHSFLTVTRDRALAQAAEV 68 Query: 60 DKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 DKR+ G+ L GIP+ IKD T G+ T S +L+ F P YESTVT+KL GA+M Sbjct: 69 DKRLAAGEEIGLLTGIPLAIKDNLCTYGVRTTCASKMLEHFVPPYESTVTEKLQAAGAIM 128 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N+DEFAMGSS E S +G +PW + SSGGS+AAVA CAA++G+ Sbjct: 129 VGKTNLDEFAMGSSTENSAFGFTANPWNPERVSGG-----SSGGSAAAVAARECAAALGS 183 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+F G VG+KPTYG SR G++++A SLDQ G + TV D+AILL AIAG+ Sbjct: 184 DTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPLAPTVTDAAILLGAIAGH 243 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D DAT + +P+PDY +AL ++GM +G+ +E + + P + + + L+ GA Sbjct: 244 DPKDATSLRVPIPDYTQALKPDLKGMRIGLIQETVGEGVQPEVKSALEAALKTLEALGAT 303 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VE+S P Y LP YYII+P+EAS+NLARYDGV +G R EG D+LEMY TR+ GFG Sbjct: 304 LVELSCPRFAYGLPTYYIIAPSEASANLARYDGVNFGFRAEGASDLLEMYMKTRAQGFGA 363 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGTY LS+ YD++YLRA+K+RTLIK DF AFEQ VDV++ PT PT+AF G Sbjct: 364 EVKRRIMIGTYALSAGYYDAYYLRAQKVRTLIKEDFARAFEQ-VDVLICPTAPTTAFKAG 422 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + SM +D+ T+ VN+AGLP +SVP +P+GLQLIG +E TLF V Sbjct: 423 EKTADPLSM--YLSDLMTIPVNLAGLPGLSVPCGFDSNGLPIGLQLIGNVLQEATLFHVA 480 Query: 478 QIIEK 482 E+ Sbjct: 481 YAYEQ 485 >gi|291612606|ref|YP_003522763.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sideroxydans lithotrophicus ES-1] gi|291582718|gb|ADE10376.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sideroxydans lithotrophicus ES-1] Length = 484 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 227/464 (48%), Positives = 315/464 (67%), Gaps = 9/464 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR+K IS+VEL +Y+ I N Q+NAYI + + + A A +D R+ G A L GIP Sbjct: 13 LRAKKISSVELTQAYLDRIAQLNPQLNAYITLNPEVSLAQARAADARLAAGKAEALTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F KG T S +L F Y++ V + + GA+ LGK NMDEFAMGSSNET Sbjct: 73 IAQKDIFCAKGWLTTCGSKMLHNFVSPYDAHVISQFNNAGAINLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW + PGGSSGG++AAVA LCAA+ GTDTGGSIRQPA+ G G Sbjct: 133 SHYGPVKNPWDTAR-----VPGGSSGGTAAAVAARLCAAATGTDTGGSIRQPAALCGISG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG CSR G+I+FA SLDQAG + R+ D A+++ +AG+DE D+T + DY R Sbjct: 188 LKPTYGVCSRYGMIAFASSLDQAGPMGRSAEDLALMMNVMAGFDERDSTSLQRDKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ + G+ +G+PKE+ + + K + I+ + GA IV+ISLP+++ ++P YY Sbjct: 248 DLNKPLTGLRIGLPKEFFAAGMGADVAKAVEAAIAEYRKLGATIVDISLPNSKLSVPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+R+DGVRYG R E D+ +MYE +R+ GFG EVK RIMIGTYVLS Sbjct: 308 VLAPAEASSNLSRFDGVRYGYRTPEYSDLADMYEKSRAQGFGAEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LI +DFTEA++Q DVI+ PT+P++AF LG++ ++ M +D++ Sbjct: 368 YDAYYLQAQKIRRLIAQDFTEAYKQ-CDVIMGPTSPSTAFKLGEKGDDPVQM--YLSDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+AVN+AGLP +S+P MP+GLQ+IG F E + +V Sbjct: 425 TIAVNLAGLPGMSIPCGFGANDMPVGLQIIGNYFDEARMLNVAH 468 >gi|108759562|ref|YP_629720.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Myxococcus xanthus DK 1622] gi|122389894|sp|Q1DCA3|GATA_MYXXD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|108463442|gb|ABF88627.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Myxococcus xanthus DK 1622] Length = 486 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/488 (47%), Positives = 330/488 (67%), Gaps = 10/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + + E +L + + S+ E + + I+ + ++ A++ V A AAA SD R Sbjct: 2 QLTDLTMLELAAKLAAGEASSEEATRASLARIQQVDPKVRAFLRVDEAGALAAARASDAR 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +G A L+G+P+G+KD F T+G+ T A S IL+GF P Y++TV + L + G ++GK Sbjct: 62 RKSGSPASALDGVPLGLKDIFLTEGVETTAGSRILEGFVPPYDATVVRLLKEAGLPLVGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSNE+S + P +PW TPGGSSGGS+AAVA ++GTDTG Sbjct: 122 LNMDEFAMGSSNESSAFFPSHNPWDV-----SRTPGGSSGGSAAAVAAREVFGALGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T TVG+KPTYGR SR G+I+FA SLDQ G +TRTV D+A LL+ IA D Sbjct: 177 GSIRQPAALTNTVGLKPTYGRVSRFGVIAFASSLDQPGPMTRTVADAAALLQVIARPDAQ 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT + PVPDY L+ ++G+ +G+P+EY + + P ++ ++ + + GA +V+ Sbjct: 237 DATSADAPVPDYSADLEAGVRGLKLGVPREYFTEGMDPEVEAAVREALREYERLGATLVD 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLPHT+YAL YY+I+PAEASSNLARYDGVR+GLR + + + ++Y TR GFG EVK Sbjct: 297 VSLPHTKYALATYYLIAPAEASSNLARYDGVRFGLRAKDARSLRDVYALTREQGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GT+ LSS YD+HYLRA+K+RTLI+ DFT AF+Q VD +L+PT+P AF LG++ Sbjct: 357 RRIMLGTFALSSGYYDAHYLRAQKVRTLIREDFTRAFQQ-VDALLSPTSPVPAFKLGEKV 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + SM D++T+ N+AGLP +SVP + +P+GLQ++G+PF E L + + Sbjct: 416 EDPLSM--YLMDIYTLPCNLAGLPGLSVPCGFTKAGLPVGLQILGRPFDEAGLLRIARAY 473 Query: 481 EKEAGYFR 488 E+E +FR Sbjct: 474 EREHDFFR 481 >gi|138893938|ref|YP_001124391.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacillus thermodenitrificans NG80-2] gi|196250512|ref|ZP_03149203.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. G11MC16] gi|166217672|sp|A4IJZ2|GATA_GEOTN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|134265451|gb|ABO65646.1| Glutamyl-tRNAGln amidotransferase subunit A [Geobacillus thermodenitrificans NG80-2] gi|196210002|gb|EDY04770.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. G11MC16] Length = 485 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/482 (47%), Positives = 322/482 (66%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 VSE L+ K++S +LVD + I ++ A++ + ++ARA A+E D ++ G+ Sbjct: 8 VSELHTLLQKKEVSISDLVDESYRRIGEVEEKVQAFLTLNEEQARAKAKELDDKLAKGEE 67 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PIGIKD TKG+ T S IL F P Y++TV ++L GA+ +GKLNMDEF Sbjct: 68 TNPLFGLPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVMERLNAAGAITIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 128 AMGSSTENSGFQLTRNPWDL-----ERVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+ IAG D D+T N Sbjct: 183 AAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQVIAGVDPMDSTSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VP+Y AL I+G+ + +PKEY + ++ + ++ +S L+ GA E+SLPH+ Sbjct: 243 IDVPNYVEALTGDIKGLKIAVPKEYLGEGVAEEVRQSVLAALSVLEKLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+G Sbjct: 303 KYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKQTRSEGFGSEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIKRDF FEQ DVI+ PTTPT AF +G E S + Sbjct: 363 TFALSSGYYDAYYKKAQKVRTLIKRDFENVFEQ-YDVIIGPTTPTPAFKIG--EKTSDPL 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP + +P+GLQ+IG+ F E T++ V E+ Y Sbjct: 420 TMYMNDILTIPVNLAGVPAISVPCGFVD-GLPVGLQIIGKHFDESTVYRVAHAFEQATDY 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|254303778|ref|ZP_04971136.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323970|gb|EDK89220.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 485 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/488 (45%), Positives = 329/488 (67%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + E RD+ S ++SAVE+V+S+ + IE ++ +++ + A A++ D Sbjct: 1 MNNLYELTAKELRDKFLSDELSAVEIVNSFYKRIEKVEDKIKSFVSLRKDIALDEAKKLD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ NG+ L G+PI IKD +G + +CS IL+ + Y+STV +KL + A+++ Sbjct: 61 EKKKNGEKLGRLAGVPIAIKDNILMEGGKSTSCSKILENYVGIYDSTVVKKLKEEDAIII 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMGS+ +TS++ +PW +D PGGSSGG++A+VA S+G+D Sbjct: 121 GVTNMDEFAMGSTTKTSFHHKTSNPW-DLDRV----PGGSSGGAAASVAAQEVPISLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + I+G D Sbjct: 176 TGGSVRQPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDVAICMNVISGTD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DAT VPDY L++ I+G+ +G+PKEY ++ L+P I + LK+ GA++ Sbjct: 236 DYDATVSKKEVPDYTEFLNKDIKGLKIGLPKEYFIEGLNPEIKNIIDNSVEALKELGAEV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 V++SLPHT+YA+P YY+++PAEASSNLAR+DG+RYG R E D+ +Y TRS GFG E Sbjct: 296 VKVSLPHTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKEYTDLESLYVKTRSEGFGAE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD+++ +A+K+RTLIK+DF + VDVILTP P+ AF L Sbjct: 356 VKRRIMIGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNE-VDVILTPVAPSVAFKL-- 412 Query: 419 EENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++ + +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF EETL V Sbjct: 413 --SDTKTPIELYLEDIFTISANLAGVPAISLPGGLVD-NLPVGVQFMGKPFDEETLIKVA 469 Query: 478 QIIEKEAG 485 +EK+ G Sbjct: 470 DALEKKIG 477 >gi|256852259|ref|ZP_05557645.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus jensenii 27-2-CHN] gi|260661709|ref|ZP_05862620.1| glutamyl-tRNA(Gln) amidotransferase subunit A protein [Lactobacillus jensenii 115-3-CHN] gi|282934847|ref|ZP_06340080.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus jensenii 208-1] gi|256615305|gb|EEU20496.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus jensenii 27-2-CHN] gi|260547456|gb|EEX23435.1| glutamyl-tRNA(Gln) amidotransferase subunit A protein [Lactobacillus jensenii 115-3-CHN] gi|281301078|gb|EFA93389.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus jensenii 208-1] Length = 479 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/490 (47%), Positives = 323/490 (65%), Gaps = 26/490 (5%) Query: 4 LNFMAVSESRDRLRSK----DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 +N++ +E+ D L K ++SA EL D I I+ ++ ++NA+I V +E Sbjct: 1 MNYL--NETIDSLNQKLANGEVSAQELADKTIANIKETDKKINAFITV---------DED 49 Query: 60 DKRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 K N D A L G+PI IKD T G+ T A SHILD F P Y++TV KL GA + Sbjct: 50 AKASENLDFANKLAGVPIAIKDNIVTNGLKTTAASHILDNFIPVYDATVVSKLKKAGATV 109 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N+DEFAMGSSNE SY+G V +PW + DK PGGSSGGS+AAVA A++G+ Sbjct: 110 VGKTNLDEFAMGSSNENSYFGAVHNPW----NLDK-VPGGSSGGSAAAVASGEIVAALGS 164 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+F G GIKPTYGR SR G+I+FA SLDQ G++T+ V+D+A +L I+G Sbjct: 165 DTGGSIRQPAAFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVLTKRVQDAAEVLNVISGA 224 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DE D+T VPD+ +AL Q ++G+ V +PKEY D + + K Q+ I +LK+ GA Sbjct: 225 DEHDSTVSEKTVPDFTKALGQDVKGLRVAVPKEYMSDAVDEGVRKAIQEQIDFLKENGAI 284 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 I E+SLPHT+Y +P YYII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG Sbjct: 285 INEVSLPHTKYVVPTYYIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGD 344 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+G++ LS+ YD + +A K+RTLI RDF + FE DVI+ PTT AF +G Sbjct: 345 EVKRRIMLGSFALSAGSYDKFFRQASKVRTLICRDFDKIFEDN-DVIVGPTTTEPAFEIG 403 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + M + ND+ T++ NM+G+PA SVPA L MP+GLQ++ + F EE++ V Sbjct: 404 SEVKDPIKMYN--NDILTISANMSGVPAASVPAGLV-NGMPVGLQIMAKRFDEESVLRVA 460 Query: 478 QIIEKEAGYF 487 IE+ ++ Sbjct: 461 DFIERNNKFY 470 >gi|323702806|ref|ZP_08114465.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfotomaculum nigrificans DSM 574] gi|323532194|gb|EGB22074.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfotomaculum nigrificans DSM 574] Length = 485 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 234/492 (47%), Positives = 316/492 (64%), Gaps = 13/492 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + E DRL K++SA E+ + + I+ ++ +Y+ + + A A A+E D + Sbjct: 2 DLSQLTAHELHDRLLKKEVSAAEITAAVFKRIDQVEDKVKSYLTITKESAMAKAQEVDGK 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ L G+PI IKD T+GI T S IL F P Y +T KL VM+GK Sbjct: 62 IARGEQVGPLAGVPIAIKDNLCTEGIRTTCASKILYNFVPPYTATAVAKLNAADMVMVGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW + PGGSSGGS+AAVA S+G+DTG Sbjct: 122 TNMDEFAMGSSTENSGFQLTYNPWDL-----ERVPGGSSGGSAAAVAAGEAILSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G++++A SLDQ G T+ V D A+ L I GYD Sbjct: 177 GSIRQPAAFCGVVGMKPTYGAVSRYGLVAYASSLDQIGPFTKDVTDMALALNVICGYDPM 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T N+ PD+ + L I+GM +GIP+EY + + P + + + I L + GA + E Sbjct: 237 DSTSANIKQPDFTQYLVNDIKGMKIGIPREYMAEGIDPQVKEKIKAAIDKLTELGAHVEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVK 360 SLPHT YA+PAYY+I+ AEASSNLARYDGVRYGLRVE +D+++MY +RS GFG EVK Sbjct: 297 TSLPHTDYAMPAYYLIATAEASSNLARYDGVRYGLRVEDAEDVVDMYMRSRSRGFGHEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A K+RTLIKRDF AFEQ D++L+PT+P++AF +G+ Sbjct: 357 RRIMLGTYSLSAGYYDAYYLKALKVRTLIKRDFDRAFEQ-YDLLLSPTSPSTAFKVGEMV 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+ M DV T+ VN+AG+PAIS+P L +P+GLQL+G+ F E TL V Sbjct: 416 NDPLQM--YLQDVCTIPVNLAGIPAISIPCGLV-NGLPVGLQLMGKAFDEGTLLRVAYTF 472 Query: 481 EKEA--GYFRPH 490 E+ G RP Sbjct: 473 EQNTDFGRLRPQ 484 >gi|15613229|ref|NP_241532.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus halodurans C-125] gi|6225410|sp|Q9Z9W9|GATA_BACHD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|4512348|dbj|BAA75313.1| similar to B.subtilis yerM gene(84%-identity) [Bacillus halodurans] gi|10173280|dbj|BAB04385.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Bacillus halodurans C-125] Length = 485 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/482 (47%), Positives = 323/482 (67%), Gaps = 11/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + + +L K+IS +LVD + IE + Q+ A++ + +KARA A+E D + Sbjct: 6 LKLKDVHTKLHEKEISVSDLVDEAYKRIEQVDGQVEAFLALNEEKARAYAKELDAALDRS 65 Query: 67 DARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +AR L GIPIG+KD TK + T S IL F P Y++TV KL + AV +GKLNMD Sbjct: 66 EARGLLFGIPIGVKDNIVTKNLRTTCSSRILGNFDPIYDATVVHKLREAQAVTIGKLNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW ++ PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 126 EFAMGSSTENSAFQKTKNPWNL-----EYVPGGSSGGSAAAVAAGEVPFTLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V D+A LL+AI+G+D D+T Sbjct: 181 QPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRNVEDNAYLLQAISGHDPMDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 NL VPDY AL I+G+ + +PKEY + + + ++ + L+ GA E+SLP Sbjct: 241 ANLDVPDYLSALTGDIKGLKIAVPKEYLGEGVKEEVKQSVLDALKVLEGLGATWEEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIM 364 H++YAL YY+++ +EAS+NLAR+DGVRYG R + D +L+MY+ TR+ GFG EVK RIM Sbjct: 301 HSKYALATYYLLASSEASANLARFDGVRYGFRSDNADNLLDMYKQTRAEGFGDEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+ LSS YD++Y +A+++RTLIK+DF + FEQ DVI+ PTTPT AF +G++ ++ Sbjct: 361 LGTFALSSGYYDAYYKKAQQVRTLIKQDFEKVFEQ-YDVIIGPTTPTPAFKIGEKTDDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +M ND+ T+ VN+AG+PAISVP + +PLGLQ+IG+ F E +++ V E+ Sbjct: 420 TM--YANDILTIPVNLAGVPAISVPCGF-DNGLPLGLQIIGKHFDEGSVYRVAHAFEQAT 476 Query: 485 GY 486 Y Sbjct: 477 DY 478 >gi|256027786|ref|ZP_05441620.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. D11] gi|289765739|ref|ZP_06525117.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. D11] gi|289717294|gb|EFD81306.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. D11] Length = 484 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 321/482 (66%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S +SAVE+V+S+ + IE ++ +++ + A A++ D++ NG Sbjct: 6 LTAKELRDKFLSNQLSAVEIVNSFYERIEKVEDKIKSFVSLRKDLALKEAKKLDEKKKNG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD +G + +CS IL+ + Y+STV +KL + A+++G NMD Sbjct: 66 EKLGKLAGIPIAIKDNILMEGQKSTSCSKILENYIGIYDSTVVKKLKEEDAIIIGITNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TS++ +PW PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 126 EFAMGSTTKTSFHHMTSNPWDL-----NRVPGGSSGGAAASVAAQEVPISLGSDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 181 QPASFCGVVGFKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDVAICMNVIAGADDYDATV 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY L++ I+G+ VG+PKEY ++ L+P I + LK GA++VE+SLP Sbjct: 241 SKKEVPDYTNFLNKDIKGLKVGLPKEYFIEGLNPEIKNVIDNSVEALKKLGAEVVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG EVK RIM Sbjct: 301 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ YD+++ +A+K+RTLIK+DF Q VDVILTP P+ AF L +++ Sbjct: 361 MGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNQ-VDVILTPVAPSVAFKL----SDTK 415 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF EETL V +EK+ Sbjct: 416 TPIELYLEDIFTISANLAGVPAISLPGGLVD-NLPVGVQFMGKPFDEETLIKVADALEKK 474 Query: 484 AG 485 G Sbjct: 475 IG 476 >gi|81300926|ref|YP_401134.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus elongatus PCC 7942] gi|109891994|sp|Q31LC2|GATA_SYNE7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|81169807|gb|ABB58147.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Synechococcus elongatus PCC 7942] Length = 479 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/487 (49%), Positives = 324/487 (66%), Gaps = 19/487 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L K+ SAVE+ ++ +Q IE Q+ +++ V A +A A A+ D+RI G+ Sbjct: 3 SIRELHSQLVRKERSAVEIAEAALQRIETLEPQLKSFLHVTADQAIAQAKAVDQRIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD T+GI T S IL GF P YESTVTQ+L + GAV +GK N+DE Sbjct: 63 EISLLAGIPIGIKDNLCTRGIPTTCASKILQGFVPPYESTVTQRLAEAGAVAVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW D T PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQTTANPW---DLTR--VPGGSSGGSAAAVAADECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYG SR G++++A SLDQ G +R+V D+AILL AIAG+D DAT + Sbjct: 178 PAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKDATSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + VPDY + L S+ G+ VG+ E D SP + Q + L+ GA+I EIS P Sbjct: 238 KVEVPDYTQFLKPSLAGIKVGVITETVTD--SPA-GQAMQAALEVLQGLGAEIREISCPR 294 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 Y LPAYYII+P+EAS+NLARYDGV+YG RV E + +++MY TR+ GFG EVK RIMI Sbjct: 295 FAYGLPAYYIIAPSEASANLARYDGVKYGYRVEEAETLIDMYCRTRAEGFGSEVKRRIMI 354 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++YL+A+K+RTLIK+DF AF + VDV+++PTTPT+AF G++ + S Sbjct: 355 GTYALSAGYYDAYYLKAQKVRTLIKQDFEAAFAE-VDVLVSPTTPTTAFKAGEKTADPLS 413 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D+ T+ VN+AGLP +S+P E +P GLQ+IG RE+ Q++ Sbjct: 414 M--YLSDLMTIPVNLAGLPGLSLPCGFDEAGLPYGLQIIGNVLRED------QVLHTAYA 465 Query: 486 YFRPHKW 492 Y + +W Sbjct: 466 YEQATEW 472 >gi|260892975|ref|YP_003239072.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ammonifex degensii KC4] gi|260865116|gb|ACX52222.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ammonifex degensii KC4] Length = 489 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/492 (46%), Positives = 324/492 (65%), Gaps = 12/492 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ F+ R+R K+ISA E+V ++++ I+ ++ A++ + ++A AE+ D Sbjct: 1 MGDICFLPAHILRERFCRKEISAKEIVTAFLERIKQVEPKVKAFLTLCEEEALNQAEQLD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + G+ L G+P+ +KD G T S IL F P Y++TV ++L + GA+++ Sbjct: 61 RALAYGEEMGPLAGVPVALKDNLCLSGFPTTCASKILANFYPPYDATVVRRLKEAGAIIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S + P +PW SSGGS+AAVA ++G+D Sbjct: 121 GKTNLDEFAMGSSTENSAFHPTANPWDLSRVPGG-----SSGGSAAAVAAGEVPVALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYGR SR G+++FA SLDQ G ITR V D A++L+ IAG+D Sbjct: 176 TGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRCVEDCALVLQVIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT + VPDY +L ++GM VGIP+EY + ++P + ++ + L D GA++ Sbjct: 236 PRDATSIPGEVPDYRSSLISDLKGMKVGIPREYLGEGIAPEVRAVVEEVAAKLADLGAQV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 SLPHT+YALPAYY+++PAEASSNLARYDGVRYGLRV K+ + TR GFG EV Sbjct: 296 DYTSLPHTKYALPAYYLVAPAEASSNLARYDGVRYGLRVPAKEAKDSMALTRKEGFGPEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTY LS+ Y+++YL+A K+RTLIKRDF EAF D +LTPTTPT AF +G++ Sbjct: 356 KRRIMLGTYALSAGYYEAYYLKALKVRTLIKRDFDEAFAH-FDCLLTPTTPTPAFRMGEK 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + +M ++D+ T+AVN+AGLPAISVPA +P+G+Q I P +E+ LF V Sbjct: 415 LADPLTM--YFSDICTLAVNLAGLPAISVPAGKV-GHLPVGVQFIAPPLKEDKLFRVAYA 471 Query: 480 IEKEAGY--FRP 489 +E+ G+ +RP Sbjct: 472 LEQVVGFPSWRP 483 >gi|288818754|ref|YP_003433102.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenobacter thermophilus TK-6] gi|288788154|dbj|BAI69901.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenobacter thermophilus TK-6] gi|308752341|gb|ADO45824.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hydrogenobacter thermophilus TK-6] Length = 480 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 313/475 (65%), Gaps = 13/475 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V E ++ + +++ E+++S+ ++ ++ A+I + +KA A+ D++I + Sbjct: 6 SVYELKNLILKREVKVSEVLESFASRFYSTEDKIKAFITPLYEKALEEAKLMDEKI---E 62 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L GIP+ IKD +G+ T S +L+ + Y++TV ++L GA+++GK NMDEF Sbjct: 63 DKPLFGIPVAIKDNINVRGLPTTCGSKMLENYVSPYDATVIERLKRAGALIVGKTNMDEF 122 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + P +PW + PGGSSGGS+A VA S+G+DTGGSIRQP Sbjct: 123 AMGSSTEYSAFFPTRNPWDL-----ERVPGGSSGGSAACVAVLSAPVSLGSDTGGSIRQP 177 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G +G+KPTYGR SR G+++FA SLDQ G R D A+L++ I+G D D+TC + Sbjct: 178 ASFCGVIGLKPTYGRVSRYGLVAFASSLDQIGPFGRRTEDVALLMEVISGEDPKDSTCAS 237 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPVP Y + + I+G+ VG+PKE+ + + +++ + L G I E+SLPH Sbjct: 238 LPVPKYTEEIRKDIKGLKVGVPKEFFEFDVQREVLESFNAFLKELDAQGCVIEEVSLPHI 297 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YA+PAYY+I+P+EASSNLARYDGVRYG R + D+ EMY TR GFGQEVK RIMIG Sbjct: 298 KYAIPAYYVIAPSEASSNLARYDGVRYGYRAKAYSDLFEMYAKTRDEGFGQEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++YL+A K+R LIKRDF +AF++ VD++ PTTPT AF LG++ + M Sbjct: 358 TFALSSGYYDAYYLKAMKVRALIKRDFEKAFKK-VDMLACPTTPTVAFKLGEKTQDPIQM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D+FTV+VN+AGLPAIS+P +P+G QLIG+PF E TL V + E Sbjct: 417 --YLSDIFTVSVNLAGLPAISLPIGFA-LGLPVGGQLIGKPFDEGTLLKVSYLWE 468 >gi|237744365|ref|ZP_04574846.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 7_1] gi|229431594|gb|EEO41806.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 7_1] Length = 484 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 222/482 (46%), Positives = 322/482 (66%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S +SAVE+V+S+ + IE ++ +++ + A A++ D++ NG Sbjct: 6 LTAKELRDKFLSNQLSAVEIVNSFYERIEKVEDKIKSFVSLRKDLALKEAKKLDEKKKNG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD +G + +CS IL+ + Y+STV +KL + A+++G NMD Sbjct: 66 EKLGKLAGIPIAIKDNILMEGQKSTSCSKILENYIGIYDSTVVKKLKEEDAIIIGITNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TS++ +PW PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 126 EFAMGSTTKTSFHHMTSNPWDL-----NRVPGGSSGGAAASVAAQEVPISLGSDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 181 QPASFCGVVGFKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDVAICMNVIAGADDYDATV 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY + L++ I+G+ VG+PKEY ++ L+P I + LK GA++VE+SLP Sbjct: 241 SKKEVPDYTKFLNKDIKGLKVGLPKEYFIEGLNPEIKNVIDNSVEALKKLGAEVVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG EVK RIM Sbjct: 301 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ YD+++ +A+K+RTLIK DF + + VDVILTP P+ AF L +++ Sbjct: 361 MGTYVLSAGFYDAYFKKAQKVRTLIKEDFEKVLNE-VDVILTPVAPSVAFKL----SDTK 415 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF EETL V +EK+ Sbjct: 416 TPIELYLEDIFTISANLAGVPAISLPGGLVD-NLPVGVQFMGKPFDEETLIKVADALEKK 474 Query: 484 AG 485 G Sbjct: 475 IG 476 >gi|119486477|ref|ZP_01620535.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Lyngbya sp. PCC 8106] gi|119456379|gb|EAW37510.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Lyngbya sp. PCC 8106] Length = 485 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/484 (47%), Positives = 326/484 (67%), Gaps = 13/484 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +K+ SAVE+ ++ IE +S++N+++ V A +A A + D +I G+ Sbjct: 3 SICELHQQLVNKERSAVEIAQEALERIEQLDSKLNSFLCVTADRALQQARQVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD T+GI T S IL+ F P YESTVTQKL D GA+M+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNLCTQGITTTCASKILENFVPPYESTVTQKLADAGAIMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW + PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQVTANPWDL-----QRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G + RTV D+AILL+AIAGYD DAT + Sbjct: 178 PASFCGIVGLKPTYGLVSRYGLVAYASSLDQIGPLARTVEDAAILLQAIAGYDTKDATSL 237 Query: 247 NLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N+ +P+Y AL +++ + VG+ KE + L P +++ + I L++ GA+I IS Sbjct: 238 NVQIPNYLAALKPTLKSKSRVKVGVIKETFGEGLDPVVEQAVTKAIETLQELGAEIQVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 P +Y LP YYII+P+EAS+NLARYDGV+YG R + +++++MY TR+ GFG EVK R Sbjct: 298 CPRFRYGLPTYYIIAPSEASANLARYDGVKYGFRSRDAENLIDMYCQTRAEGFGAEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+K+RTLIK+DF A Q V+V++ PT PT+AF G++ + Sbjct: 358 IMVGTYTLSAGYYDAYYLKAQKVRTLIKQDFERALSQ-VEVLVCPTAPTTAFKAGEKTAD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ T+ VN+AGLPA+S+P E+ +P+G+QLIG+ E L V E+ Sbjct: 417 PLSM--YLSDLMTIPVNLAGLPALSIPCGFDEQGLPIGMQLIGKVLGEARLLEVAYAYEQ 474 Query: 483 EAGY 486 + Sbjct: 475 ATAW 478 >gi|329767128|ref|ZP_08258656.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemella haemolysans M341] gi|328837853|gb|EGF87478.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemella haemolysans M341] Length = 485 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 218/470 (46%), Positives = 311/470 (66%), Gaps = 11/470 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 +L++K+I +LV + I+ ++ ++ ++I V + A AEE D+ G A L G Sbjct: 14 KLKNKEIKPSDLVKESLDRIKATDEKVGSFITVTEEVALKQAEELDRAQEEGRAEGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD TK I T S IL+GF P Y++TV KL ++LGKLNMDEFAMG S Sbjct: 74 IPMGIKDNIVTKDIQTTCASKILEGFNPIYDATVMNKLNKENPILLGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSYY +P +D+ PGGSSGGS+ AVA + ++G+DTGGS+RQPAS+ G Sbjct: 134 ETSYYKLTRNP-HDLDAV----PGGSSGGSATAVAAGQVSFTLGSDTGGSVRQPASYCGI 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TRTV+D+A +L+ I+G D D T + VP++ Sbjct: 189 VGLKPTYGRVSRFGLVAFASSLDQIGPMTRTVKDNARVLEIISGLDANDMTSAPVEVPEF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G + +PKEY + + K +G+ +L+ GA + E+SLP+T YA+ Sbjct: 249 SKIITGDIKGKKIALPKEYFGAGIDEDVKKAVLEGVKYLESQGAIVEEVSLPNTDYAIST 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEASSNL+R+DG+RYG R ++ E+Y+ TR GFG EVK RIM+GTYVLSS Sbjct: 309 YYIIASAEASSNLSRFDGIRYGFRSPNATNLEEIYKKTRGEGFGAEVKRRIMLGTYVLSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +A+++RTLIK+DF + FE+ DVI+ PT PT AF +G+E + +M ND Sbjct: 369 GYYDAYYKKAQQVRTLIKQDFDKVFEE-YDVIIGPTAPTVAFNIGEEVGDPITM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T+ VNMAGLP +S+P K+ P+G+Q+I +PF E TL+ V E+ Sbjct: 426 ILTIPVNMAGLPGLSIPCGFKGKR-PIGMQIIAKPFAESTLYDVAYNFEQ 474 >gi|254423370|ref|ZP_05037088.1| Amidase, putative [Synechococcus sp. PCC 7335] gi|196190859|gb|EDX85823.1| Amidase, putative [Synechococcus sp. PCC 7335] Length = 480 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/482 (49%), Positives = 318/482 (65%), Gaps = 10/482 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING- 66 A+ E +L +++ SAVE+ + ++ + Q+N+++ + A+KA A A+ D +I G Sbjct: 3 AIRELHKQLTTRERSAVEIAQAQLEYAQAVEPQLNSFVSLTAEKALAQAQAVDDKISAGE 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D L GIPI +KD TKGI T S IL+ F P YESTVT++L GAV +GK N+DE Sbjct: 63 DIELLGGIPIALKDNLCTKGIRTTCSSRILENFVPPYESTVTERLDAAGAVFVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG S + S +GP +PW + PGGSSGGS+AAVAG S+G+DTGGSIRQ Sbjct: 123 FAMGGSTKNSAFGPSKNPWDTAR-----VPGGSSGGSAAAVAGGQAPISLGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G+++FA SLDQ G +TV D+AILL AIAG+D DAT + Sbjct: 178 PASFCGIVGMKPTYGLVSRFGLVAFASSLDQIGPFGQTVEDAAILLGAIAGHDPKDATSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + +PDY + L ++G TVG+ KE + L + + I LK GAKI IS P Sbjct: 238 KVDIPDYTKFLASDLKGRTVGVIKETFGEGLDSEVGAAVEVAIDQLKALGAKIKTISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 Y + AYYII+P EAS+NLARYDGVRYGLR ++L MY TRS GFG EVK RIMIG Sbjct: 298 FNYGVSAYYIIAPCEASANLARYDGVRYGLRSAEPNLLSMYNKTRSEGFGDEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD+ YL+A+K+RTL+K+DF +AFE VDV+++PT PT+AF + +E+++ SM Sbjct: 358 TYALSAGYYDAFYLKAQKVRTLMKQDFEKAFED-VDVLVSPTVPTTAFKI-EEKDDPLSM 415 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + D+ T+ VNMAGLP +SVP + MP+GLQL+ RE+ LF VG E+ + Sbjct: 416 YLL--DLMTIPVNMAGLPGMSVPCGFDKAGMPIGLQLVSNVLREDLLFEVGHAYEQATDW 473 Query: 487 FR 488 + Sbjct: 474 HK 475 >gi|331005042|ref|ZP_08328446.1| Aspartyl-tRNA(Asn) amidotransferase subunit A [gamma proteobacterium IMCC1989] gi|330421097|gb|EGG95359.1| Aspartyl-tRNA(Asn) amidotransferase subunit A [gamma proteobacterium IMCC1989] Length = 494 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 224/486 (46%), Positives = 324/486 (66%), Gaps = 9/486 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ ++E LR+K+ S+VEL Y++ I+ +SQ N+YI V +++A +A+++D+ + Sbjct: 1 MHHYTIAELMKSLRNKEFSSVELTQHYLERIKQLDSQFNSYITVSSEQALLSAQQADQAL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A DL GIPI KD F T+G T S +L F P Y +T+ + L + GAV LGK N Sbjct: 61 AKGNASDLCGIPIAHKDLFCTQGTLTSCGSKMLSNFVPPYNATIVENLANAGAVSLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE+S+YG +PW ++D PGGSSGGS+AAVA L A+ G+DTGGS Sbjct: 121 MDEFAMGSSNESSFYGASKNPW-NIDCV----PGGSSGGSAAAVAAQLAVATTGSDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G G+KPTYGR SR G++++A SLDQAG I RT D+AI+L A+A +D+ D+ Sbjct: 176 IRQPASFCGLTGLKPTYGRVSRWGMVAYASSLDQAGPIARTAEDAAIMLNAMASFDDKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V++ DY+ +L+ SI+G+ +G+P+EY D L + ++ + GA + IS Sbjct: 236 TSVDIEKSDYKASLNDSIKGLRIGVPEEYFQDGLDNDVATLVNAALAEYEKMGATLHPIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPHT A+PAYY+I+PAEAS+NL+R+DGVRYG R + KD++++Y+ +R GFG EVK R Sbjct: 296 LPHTHLAIPAYYVIAPAEASANLSRFDGVRYGHRCDDPKDLMDLYKRSREEGFGDEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++G Y LS+ YD++Y +A+++R LIK+DF +AF Q VDVI P P AF +G++ N Sbjct: 356 ILVGAYALSAGYYDAYYRKAQQVRRLIKQDFVDAFTQ-VDVIAGPVVPNPAFGIGEKSTN 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D++T+ N+AGL IS+P L P+GLQL G F E L +V ++ Sbjct: 415 PVSM--YLEDIYTLPTNLAGLCGISLPCGLSSDNKPVGLQLTGNYFAEAKLLNVAHQFQQ 472 Query: 483 EAGYFR 488 + + Sbjct: 473 HTDHHK 478 >gi|113475718|ref|YP_721779.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Trichodesmium erythraeum IMS101] gi|123160897|sp|Q113L8|GATA_TRIEI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|110166766|gb|ABG51306.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Trichodesmium erythraeum IMS101] Length = 485 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/486 (47%), Positives = 327/486 (67%), Gaps = 13/486 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++S+ +L SK SAVE+ ++ I ++ ++I V A+KA A A + D +I G+ Sbjct: 3 SISDIHQQLISKQRSAVEITQEALENINQLEPKLKSFICVTAEKAIAQARQVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPI +KD T+GI T S IL F P YESTVTQKL D GA++LGK N+DE Sbjct: 63 KIGLLTGIPIAVKDNICTRGIPTTCGSKILQNFIPPYESTVTQKLVDAGAIILGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSS E S Y +PW D+T GSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FGMGSSTENSAYQVTTNPW---DNTRVPG--GSSGGSAAAVASAESVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VGIKPTYG SR G++++A S+DQ G ++RTV+DSAILL+AIAGYD D+T + Sbjct: 178 PASFCGVVGIKPTYGLVSRYGLVAYASSMDQIGPLSRTVKDSAILLQAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N+PVPDY + L +++ + +G+ +E D L ++ + + + + +++ GA+I IS Sbjct: 238 NVPVPDYTKNLTPNLRPKGQIRIGLIQETFGDGLDSSVLQAFTKAVELMQELGAEIQVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 P Y LP YY+I+P+EAS+NLARYDGV+YG R E +++L MY TRS GFG EVK R Sbjct: 298 CPRFSYGLPTYYVIAPSEASANLARYDGVKYGFRASESENLLNMYAKTRSEGFGSEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK DF +AF + VD++ PT+PT+AF LG++ +N Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKVRTLIKEDFDKAFAK-VDILACPTSPTTAFKLGEKSDN 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ T+ VN+AGLPA+S+P ++ +P+G+QLI +E+ LF + E+ Sbjct: 417 PLSM--YLSDLMTIPVNLAGLPALSLPCGFDQQGLPIGMQLISNVLKEDLLFEAAYVYEQ 474 Query: 483 EAGYFR 488 +++ Sbjct: 475 ANNWYK 480 >gi|156741929|ref|YP_001432058.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Roseiflexus castenholzii DSM 13941] gi|259647224|sp|A7NKM0|GATA_ROSCS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|156233257|gb|ABU58040.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseiflexus castenholzii DSM 13941] Length = 490 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/482 (48%), Positives = 321/482 (66%), Gaps = 9/482 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + V+++R+ L +IS++EL D+ + I ++ A++ V A ARA A +D Sbjct: 1 MTPLYQLTVAQAREMLARGEISSLELTDALLTRIAAVEPKVRAFLVVDAAGARAQARAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R GDA L GIP+GIKD +T+G+ T S +L+ + P Y++T +L GAV+LG Sbjct: 61 ARRAAGDASPLLGIPMGIKDVISTQGLRTTCASKMLENYTPVYDATAVARLKAAGAVILG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSS E S + +PW SSGGS+AAVA A++GTDT Sbjct: 121 KLNCDEFAMGSSTENSAFQQTRNPWNLERVPGG-----SSGGSAAAVAAGEAPAALGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ G G+KPTYGR SR G+++FA SLDQ G + RTVRD AI+L+ IAG D Sbjct: 176 GGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIVLRVIAGADP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DATC + P PDYE AL I+G+ +G+P+EY + + P ++ + I L++ GA++ Sbjct: 236 FDATCTDYPAPDYEAALTGDIRGLRIGVPREYFVAGMQPDVEAAVRTAIEVLREQGAEVC 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EISLPHT YALP YY+I+PAEAS+NLAR+DGVRYGLRV G+ + E TR GFG EV+ Sbjct: 296 EISLPHTPYALPVYYLIAPAEASANLARFDGVRYGLRVPGESYFDELERTRGAGFGPEVR 355 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++Y RA+++RTLI+RD+ +AFEQ VDVI PTTPT AF +G Sbjct: 356 RRIMLGTYALSAGYYDAYYKRAQQVRTLIRRDYQQAFEQ-VDVIAAPTTPTVAFKIGAHT 414 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M DV T+ +N+AGLP + VP E +P+GLQLIG+ F EE+L VG Sbjct: 415 DDPLAM--YLEDVCTLPLNLAGLPGLVVPCGFAE-GLPIGLQLIGRAFDEESLLRVGDAY 471 Query: 481 EK 482 ++ Sbjct: 472 QR 473 >gi|311029287|ref|ZP_07707377.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus sp. m3-13] Length = 485 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/482 (47%), Positives = 321/482 (66%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGD 67 +SE L K+IS +LVD+ + I + ++ A++ + + AR A+ D+ + + D Sbjct: 8 LSELHSLLHKKEISVSDLVDTSYKRINEVDDKVQAFLTLDEENARKYAKVLDQALGLEKD 67 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD TKGI T A S IL F P Y +TV +KL +V +GK+NMDEF Sbjct: 68 HGLLFGLPIGVKDNIVTKGIRTTAASKILGDFNPIYNATVVEKLNQAESVTIGKINMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 128 AMGSSNENSAFAATKNPWDL-----ERVPGGSSGGSAAAVAAGEVFFSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+I+FA SLDQ G ITRTV D+A LL+AI+G D D+T N Sbjct: 183 AAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPITRTVEDNAYLLQAISGLDPMDSTSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPD+ +L I+G+ +G+PKEY + +S + ++ + + L+ GA E+SLPH+ Sbjct: 243 ADVPDFLSSLTGDIKGLKIGVPKEYLAEGVSEEVRQSVKDALKVLEGLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 QYAL YY++S +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+G Sbjct: 303 QYALATYYLLSSSEASANLARFDGVRYGYRTDNAKNLIDMYKQTRSEGFGPEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++Y++A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G EN + Sbjct: 363 TYALSAGHYDAYYVKAQKVRTLIKQDFEDVFEK-YDVIIGPTTPTPAFKVG--ENTKDPL 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+P ISVPA + +P+GLQ+IG F E T++ V E+ + Sbjct: 420 TMYANDILTIPVNLAGVPGISVPAGFVD-GLPVGLQIIGNHFDESTIYRVAHAFEQATDH 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|170757862|ref|YP_001782890.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum B1 str. Okra] gi|229485873|sp|B1INF7|GATA_CLOBK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169123074|gb|ACA46910.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum B1 str. Okra] Length = 485 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 218/488 (44%), Positives = 321/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDVK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIPIGIKD KG+ S IL+G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPIGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGSEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L IAG D+ Sbjct: 177 GSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSVIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V+ VPDY+++L + I+G +GIPKE+ D L I K+ ++ I L+ GA++ Sbjct: 237 DFTTVDKEVPDYKKSLTKDIKGKRIGIPKEFFGDGLDKNIRKSVEEAIKVLEANGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRSKNFKDAQDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F+ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKD-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMVD-GLPVGLQIISDYFKEDVLFNLAYSY 472 Query: 481 EKEAGYFR 488 E+ +++ Sbjct: 473 EQSVDFYK 480 >gi|313896613|ref|ZP_07830162.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312974798|gb|EFR40264.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 488 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/475 (48%), Positives = 308/475 (64%), Gaps = 10/475 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-L 71 D L ++ISA EL + ++ + Q+ AY+ + AR A+ D +I + L Sbjct: 12 HDMLSRREISARELTEDAFARMDAAEPQVGAYLLETREAARMQADAVDAKIAAKEEIPFL 71 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP +KD TKG+ T A S IL+ F P Y++TV KL D AV+LGK NMDEFAMG Sbjct: 72 AGIPGAVKDNICTKGVRTTAASKILENFVPPYDATVVTKLHDAAAVVLGKTNMDEFAMGG 131 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S Y P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPASF Sbjct: 132 STENSAYRPTHNPWDTAR-----VPGGSSGGSAAAVAAGTAIWALGSDTGGSIRQPASFC 186 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+I++A SLDQ G +TR V D+A LL IAG+D D+T PVP Sbjct: 187 GIVGLKPTYGRVSRYGLIAYASSLDQIGPVTRDVTDAAHLLNVIAGHDVMDSTASKSPVP 246 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 DY +AL Q ++G+ +G+PKEY + + ++ ++ I + GA++ EISLPHT YA+ Sbjct: 247 DYTKALTQDVKGLKIGLPKEYFIPGMDAEVETAVRKAIHDFESMGAEVREISLPHTDYAV 306 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+I+PAEA++NL RYDGV YG RV+G+D+++M TR+ FG EV+ RI+IG Y LS Sbjct: 307 STYYLIAPAEAATNLERYDGVSYGARVDGEDLVDMMTRTRTEKFGDEVRRRILIGNYALS 366 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD++YL+A K+RTLI+ DFT AFE VDVI+TPT PT+A+ +G+ EN + Sbjct: 367 AGYYDAYYLKALKVRTLIREDFTRAFED-VDVIMTPTAPTTAYRIGEIEN---PLQMYLQ 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D+ TV VN+AGLP ISVP +P+GLQ+IG+P EET+ E+ Y Sbjct: 423 DISTVPVNLAGLPGISVPCGFSAAGLPIGLQIIGKPLAEETILRAAFAYEQAHDY 477 >gi|268318045|ref|YP_003291764.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodothermus marinus DSM 4252] gi|262335579|gb|ACY49376.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodothermus marinus DSM 4252] Length = 491 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 216/497 (43%), Positives = 314/497 (63%), Gaps = 23/497 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + ++ +++R L + S LV S+++ IE N ++NA+I V + A A A D+R+ Sbjct: 1 MEYLTYADARRALERGETSCEALVSSFLERIEAENPRLNAFISVDPEGALAQARALDERL 60 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L G+ + +KD K S +L+ F Y++TV +L + GA+ +GK Sbjct: 61 ARGEPLPPLGGLVLAVKDVICIKDQRVTCGSRMLENFVSLYDATVITRLREAGAIFIGKT 120 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSSNETSY+GP +P + PGGSSGGS+ AVA +C A++G+DTGG Sbjct: 121 NCDEFAMGSSNETSYFGPARNPI-----NPDYVPGGSSGGSAVAVAARMCQAALGSDTGG 175 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+F G VG+KPTYGR SR G++++A S D G +T TV D+A +L+ IAG D D Sbjct: 176 SIRQPAAFCGIVGLKPTYGRVSRYGLVAYASSFDTIGPMTHTVEDAARILQVIAGVDRWD 235 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + VPDY AL Q I+G+ +G+P+EY + L P + ++ + L+ AGA + E+ Sbjct: 236 STSAPVEVPDYLEALKQPIKGLRIGLPREYFTEGLDPEFRQVLEERAAQLEAAGAVVQEV 295 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--------------ILEMYE 348 SLPHT+Y + YYI++ AEASSNLARYDG+RYG R + + I +Y Sbjct: 296 SLPHTEYGIATYYILATAEASSNLARYDGIRYGYRADVQQIRRELAESDSDDSVIYRLYV 355 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 +RS GFG EVK RIM+GTYVLS+ Y+++Y +A+++R LI++DF AFEQ VDV+LTP Sbjct: 356 RSRSEGFGTEVKRRIMLGTYVLSAGYYEAYYAKAQRVRRLIRQDFDRAFEQ-VDVLLTPA 414 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 +PT FPLG + ++ M +DV+TV N+AG+P + VP P+G QL+G+ F Sbjct: 415 SPTPPFPLGSKLSDPLEM--YLSDVYTVTANLAGIPGLVVPVGTHSSGFPVGAQLLGRHF 472 Query: 469 REETLFSVGQIIEKEAG 485 E TL VG+ + + +G Sbjct: 473 DEATLLRVGRALMEVSG 489 >gi|254787704|ref|YP_003075133.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Teredinibacter turnerae T7901] gi|259647227|sp|C5BSY8|GATA_TERTT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|237685884|gb|ACR13148.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Teredinibacter turnerae T7901] Length = 484 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/476 (47%), Positives = 322/476 (67%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E +L++K+ S+ E+ ++ I+ + N Y+ V + A A A+ +D R+ Sbjct: 1 MHNLTIAEISRKLQAKEFSSEEITRYFLDRIKQQDPTYNCYVTVTEELAMAQAKAADARL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A + G+P KD F T G+ T S +LD F P Y +TV + + GAVMLGK N Sbjct: 61 AAGNAPTMCGVPFAHKDIFCTNGVKTTCGSKMLDNFVPPYNATVVENYINEGAVMLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETSY+GPV +PW + PGGSSGGS+AAVA + + TDTGGS Sbjct: 121 MDEFAMGSSNETSYFGPVKNPWDT-----NCVPGGSSGGSAAAVAARMAPGATATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G GIKPTYGR SR G+I+FA SLDQAG++ R+ D+AI+L +AGYD D+ Sbjct: 176 IRQPAALCGITGIKPTYGRVSRWGMIAFASSLDQAGVMARSAEDAAIMLNVMAGYDNKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TC++ PVPDY L S+ G+T+G+PKEY L+P + Q I + AGAKI IS Sbjct: 236 TCIDEPVPDYIANLGDSLAGVTIGVPKEYFEVGLNPGTEARVQDAIKQYETAGAKIKSIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPH+ A+PAYY+I+PAE S+NL+R+DGVRYG R + KD++++Y+ +R GFG+EVK R Sbjct: 296 LPHSHLAVPAYYVIAPAECSANLSRFDGVRYGHRCDDPKDLMDLYKRSRGEGFGEEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ YD++Y +++++R LIK+DF +AF++ VDVI+ PT P+ AF G + ++ Sbjct: 356 ILVGTYCLSAGYYDAYYGKSQQVRRLIKQDFVDAFKE-VDVIMGPTAPSPAFAFGSKGDD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +M D++T+A N+AGLP +SVP L + K P+GLQLIG F E L ++ Sbjct: 415 PVAM--YLEDIYTIATNLAGLPGMSVPCGLVDNK-PVGLQLIGNFFAESKLLNLAH 467 >gi|260494082|ref|ZP_05814213.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_33] gi|260198228|gb|EEW95744.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_33] Length = 484 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 321/482 (66%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S +SAVE+V+S+ + IE ++ +++ + A A++ D++ NG Sbjct: 6 LTAKELRDKFLSNQLSAVEIVNSFYERIEKVEDKIKSFVSLRKDLALKEAKKLDEKKKNG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD G + +CS IL+ + Y+STV +KL + A+++G NMD Sbjct: 66 EKLGKLAGIPIAIKDNILMGGQKSTSCSKILENYIGIYDSTVVKKLKEEDAIIIGITNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TS++ +PW PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 126 EFAMGSTTKTSFHHMTSNPWDL-----NRVPGGSSGGAAASVAAQEVPISLGSDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 181 QPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAGADDYDATV 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY L++ I+G+ VG+PKEY ++ L+P I + LK GA++VE+SLP Sbjct: 241 SKKEVPDYTEFLNKDIKGLKVGLPKEYFIEGLNPEIKNVIDNSVEALKKLGAEVVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG EVK RIM Sbjct: 301 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYIKTRSEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ YD+++ +A+K+RTLIK+DF Q VDVILTP P+ AF L +++ Sbjct: 361 MGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNQ-VDVILTPVAPSVAFKL----SDTK 415 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF EETL V +EK+ Sbjct: 416 TPIELYLEDIFTISANLAGVPAISLPGGLVD-NLPVGVQFMGKPFDEETLIKVADALEKK 474 Query: 484 AG 485 G Sbjct: 475 IG 476 >gi|126669079|ref|ZP_01740011.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinobacter sp. ELB17] gi|126626457|gb|EAZ97122.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinobacter sp. ELB17] Length = 485 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 217/480 (45%), Positives = 321/480 (66%), Gaps = 6/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+E L S IS+VEL ++ I+ + Q N++I V A A A+ +D++ G+ Sbjct: 5 SVAELSRELESGKISSVELTREFLDRIKAEDGQYNSFITVTEDLAMADAKAADEQRAAGN 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A G+P KD F T G+ T A S +L F P Y++TV GAV LGK NMDEF Sbjct: 65 ANVWTGVPFAHKDIFCTNGVATTAGSKMLANFVPPYDATVVANFRAAGAVCLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E+S++GPV +PW ++ +K PGGSSGGS+AA+A L A+ TDTGGSIRQP Sbjct: 125 AMGSSTESSFFGPVTNPW-GLNKGEKRVPGGSSGGSAAAIAARLVPAATATDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G+KPTYGR SR G+I+FA SLDQ G + RT D+A++L +AG+D D+T N Sbjct: 184 AALCGVTGLKPTYGRVSRYGMIAFASSLDQGGTMARTAEDNALMLNVMAGFDPKDSTSAN 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY L+Q ++G+ VG+P+EY D L+P +++ + + + GA + E+SLPH Sbjct: 244 RAVPDYTATLNQPLKGLRVGLPREYFSDQLNPAMEQQVRNAVKEYEKLGATVKEVSLPHA 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ AYY+I+PAEAS+NL+R+DGVRYG R + +D+ ++Y TR+ GFG EVK RI++G Sbjct: 304 ELAIAAYYVIAPAEASANLSRFDGVRYGYRCDNPQDLNDLYTRTRAEGFGNEVKRRILVG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ +D++YL+A+K+R LI++DF AF++ VDV+++P +P+ AF G++ ++ +M Sbjct: 364 TYALSAGYFDAYYLKAQKVRRLIQQDFINAFKE-VDVLMSPVSPSPAFVQGEKTSDPVTM 422 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D+FT+AVN+ G+PA+SVPA + +P+GLQ+IG F E L + ++ G+ Sbjct: 423 --YLEDIFTIAVNLVGVPAMSVPAGFVD-GLPVGLQIIGNYFEEARLLNAAHQFQQVTGW 479 >gi|39931553|sp|Q8DK65|GATA_THEEB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 482 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/476 (48%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L K+ SA E+ +Y+ I +++++ V +A A A E DKR+ G+ Sbjct: 4 IQELHRQLVRKERSATEITQAYLDRIAQVEPTLHSFLTVTRDRALAQAAEVDKRLAAGEE 63 Query: 69 RDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ IKD T G+ T S +L+ F P YESTVT+KL GA+M+GK N+DEF Sbjct: 64 IGLLTGIPLAIKDNLCTYGVRTTCASKMLEHFVPPYESTVTEKLQAAGAIMVGKTNLDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S +G +PW + SSGGS+AAVA CAA++G+DTGGSIRQP Sbjct: 124 AMGSSTENSAFGFTANPWNPERVSGG-----SSGGSAAAVAARECAAALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYG SR G++++A SLDQ G + TV D+AILL AIAG+D DAT + Sbjct: 179 AAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPLAPTVTDAAILLGAIAGHDPKDATSLR 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +P+PDY +AL ++GM +G+ +E + + P + + + L+ GA +VE+S P Sbjct: 239 VPIPDYTQALKPDLKGMRIGLIQETVGEGVQPEVKSALEAALKTLEALGATLVELSCPRF 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 Y LP YYII+P+EAS+NLARYDGV +G R EG D+LEMY TR+ GFG EVK RIMIG Sbjct: 299 AYGLPTYYIIAPSEASANLARYDGVNFGFRAEGASDLLEMYMKTRAQGFGAEVKRRIMIG 358 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YLRA+K+RTLIK DF AFEQ VDV++ PT PT+AF G++ + SM Sbjct: 359 TYALSAGYYDAYYLRAQKVRTLIKEDFARAFEQ-VDVLICPTAPTTAFKAGEKTADPLSM 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ T+ VN+AGLP +SVP +P+GLQLIG +E TLF V E+ Sbjct: 418 --YLSDLMTIPVNLAGLPGLSVPCGFDSNGLPIGLQLIGNVLQEATLFHVAYAYEQ 471 >gi|282895503|ref|ZP_06303640.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Raphidiopsis brookii D9] gi|281199536|gb|EFA74399.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Raphidiopsis brookii D9] Length = 486 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/479 (49%), Positives = 317/479 (66%), Gaps = 12/479 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + +L +K+ SA+E+ Y++ I ++++++++ A+ A A + DK+I G+ Sbjct: 3 SIRQLHQQLVNKERSAIEIAQYYLEQIHLLEPKLHSFLKITAEHALIQAGDIDKKIATGE 62 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIG+KD TKGI T S IL+GF P YESTVTQKL GAV +GK N+DE Sbjct: 63 EISILAGIPIGVKDNLCTKGIVTTCGSKILEGFIPPYESTVTQKLNQMGAVTVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW SSGGS+AAVA C S+G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQTTANPWDISTVPGG-----SSGGSAAAVAAAECVVSLGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G RTV D+AILL AIAGYD D+T + Sbjct: 178 PASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFGRTVEDAAILLNAIAGYDPQDSTSL 237 Query: 247 NLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + +PDY L D + + VG+ KE L + Q I+ LKD G +I EIS Sbjct: 238 KVAIPDYTANLTPDLKEKKLKVGVIKETCGQGLDEEVSSAVNQAIAQLKDLGVEIQEISC 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 P +Y +P+YYII+P+EAS+NLARYDGV+YG+R + D +L MY TR++GFG EVK RI Sbjct: 298 PRFRYGVPSYYIIAPSEASANLARYDGVKYGIRAQDPDNLLSMYNRTRAMGFGAEVKRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 MIGTY LS+ YD++YL+A+K+RTLIK DF +AF + VDV+LTPT PT+AF G++ + Sbjct: 358 MIGTYALSAGYYDAYYLKAQKVRTLIKEDFEQAFTK-VDVLLTPTAPTTAFKAGEKITDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM ND+ T+ VN+AGLPAISVP K +P+G+QLIG+ RE+ LF + E+ Sbjct: 417 LSM--YLNDLMTIPVNLAGLPAISVPCGFDSKGLPIGMQLIGKVLREDQLFQLAYAYEQ 473 >gi|56418817|ref|YP_146135.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacillus kaustophilus HTA426] gi|81558106|sp|Q5L3B3|GATA_GEOKA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56378659|dbj|BAD74567.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (Glu-ADT subunit A) [Geobacillus kaustophilus HTA426] Length = 485 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/483 (47%), Positives = 324/483 (67%), Gaps = 11/483 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE L+ K++S +LVD + I+ ++ A++ + ++ARA A+E D ++ G+ Sbjct: 7 SVSELHTLLKKKEVSISDLVDESYRRIDEVEEKVQAFLTLNEEQARAKAKELDNQLAKGE 66 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TKG+ T S IL F P Y++TV ++L G + +GKLNMDE Sbjct: 67 ETNPLFGLPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVMERLNAAGTITIGKLNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 127 FAMGSSTENSGFQLTRNPWDL-----ERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A +L+AIAG D D+T Sbjct: 182 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYVLQAIAGVDPMDSTSA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+PVP+Y AL I+G+ + +PKEY + + + ++ ++ L+ GA E+SLPH Sbjct: 242 NIPVPNYVEALTGDIKGLKIAVPKEYLGEGVDEGVRQSVLAALAVLEKLGAAWEEVSLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+ Sbjct: 302 SKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKLTRSEGFGAEVKRRIML 361 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LSS YD++Y +A+K+RTLIKRDF FE+ DVI+ PTTPT AF +G E S Sbjct: 362 GTFALSSGYYDAYYKKAQKVRTLIKRDFENVFER-YDVIIGPTTPTPAFKIG--EKTSDP 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + ND+ T+ VN+AG+PAISVP + +P+GLQ+IG+ F E T++ V E+ Sbjct: 419 LTMYMNDILTIPVNLAGVPAISVPCGFVD-GLPVGLQIIGKHFDESTVYRVAHAFEQATD 477 Query: 486 YFR 488 Y + Sbjct: 478 YHK 480 >gi|296314452|ref|ZP_06864393.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria polysaccharea ATCC 43768] gi|296838741|gb|EFH22679.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria polysaccharea ATCC 43768] Length = 481 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 299/467 (64%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL +Y+ AI N +N YI + K A A +D+RI G+ L G+P Sbjct: 13 LQSKQISAVELASAYLAAITEKNPTLNGYITIDQDKTLAEARAADERIAQGNGSVLTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F G + S +LD F Y +TV Q L D G V LG+ NMDEFAMGS+NE Sbjct: 73 VAYKDIFCQTGWRSACSSKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG +PW + PGGSSGGS+A VA L A++G+DTGGSIRQPAS G G Sbjct: 133 SFYGAAKNPWNL-----EHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G++++A S DQAG + +T D AILL A+AG+D D+T + DY R Sbjct: 188 IKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD+ ++G+ +G+PKEY + S + Q I LK GA++VE+SLP T+ ++PAYY Sbjct: 248 DLDKPLKGVKIGLPKEYFSEGNSTDVRTALQNTIDLLKAQGAELVEVSLPQTKLSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ AEA +NL+RYDGVRYG R + D+ EMY TR+ GFG EVK RIMIGTYVLS Sbjct: 308 VLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ DF AF + D+IL PT P +A +G + S + +D++ Sbjct: 368 YDAYYLKAQKLRRLVADDFQTAFAR-CDLILAPTAPAAAPKIGAD---SSPVETYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+++PA +P+G+QLIG F E + I+ Sbjct: 424 TIAVNLAGLPALTLPAGFSGGGLPVGVQLIGNYFSEAKILGAAHQIQ 470 >gi|304310262|ref|YP_003809860.1| Aspartyl/glutamyl-tRNA (Asp/Gln) amidotransferase, subunit A [gamma proteobacterium HdN1] gi|301795995|emb|CBL44199.1| Aspartyl/glutamyl-tRNA (Asp/Gln) amidotransferase, subunit A [gamma proteobacterium HdN1] Length = 484 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/471 (47%), Positives = 318/471 (67%), Gaps = 10/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E L S IS+V L + ++ I+ + +N+ I A++A + A+ +D+R G A Sbjct: 6 LAELSRALSSGAISSVALTEHFLARIQKYDPLLNSLITTTAEQALSQAKMADERRKQGKA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F T+G+ T S +LD F YESTVTQKL D G VMLGK NMDEFA Sbjct: 66 TALTGIPIVHKDLFCTQGVRTSCASKMLDNFISPYESTVTQKLADAGMVMLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS++ETS+YGP +PW + PGGSSGGS+AAVA L + G+DTGGSIRQPA Sbjct: 126 MGSTSETSFYGPTKNPWDL-----EHVPGGSSGGSAAAVAARLAPIATGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G G+KPTYGR SR G+I+FA SLDQ G + +T D+A+LL+ +AG+D D+T +L Sbjct: 181 SLCGITGLKPTYGRISRFGMIAFASSLDQGGPMAQTAEDAALLLEGMAGFDPKDSTSADL 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVP Y L+ ++G+ +G+P+E+ + L + Q + L+ GA + E++LP T Sbjct: 241 PVPRYSDTLNHDLKGLRIGLPREFFAEGLDAGVASLIQAAVKELEKLGASVKEVTLPSTS 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A+PAYY+I+PAEASSNL+R+DGVR+G R + KD+ ++Y+ +R GFG EVK RIMIGT Sbjct: 301 LAVPAYYVIAPAEASSNLSRFDGVRFGYRCAQPKDLEDLYKRSRGEGFGAEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++YL+A+K+R LI++D+ AF + VDV++ PTTP++ F LG+ + +M Sbjct: 361 YALSAGYYDAYYLQAQKVRRLIRQDYDNAFHE-VDVLIGPTTPSTGFRLGESARDPLAM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D++T+ VN+AGLPA+S+PA +P+GLQLIG F E L ++G Sbjct: 419 -YLSDIYTIGVNLAGLPAMSLPAGFI-NGLPVGLQLIGPHFSEAKLLNIGH 467 >gi|119508965|ref|ZP_01628117.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Nodularia spumigena CCY9414] gi|119466494|gb|EAW47379.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Nodularia spumigena CCY9414] Length = 485 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/485 (47%), Positives = 321/485 (66%), Gaps = 13/485 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E ++L K+ SAVE+ + I+ ++++++ V +KA A A D +I G+ Sbjct: 3 SIRELHEQLIKKECSAVEITQEALDRIQALEPKLHSFLHVTTEKALAQARAVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD T+GI T S IL+ F P YESTVTQKL D GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNLCTQGIPTTCASRILENFVPPYESTVTQKLIDAGAVMIGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSS E S Y +PW PGGSSGGS+AAVA C S+GTDTGGSIRQ Sbjct: 123 FGMGSSTENSAYQITNNPWDL-----SRVPGGSSGGSAAAVAAGECVVSLGTDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYG SR G+I++A SLDQ G RTV D+AI+L AIAGYD D+T + Sbjct: 178 PAAFCGVVGMKPTYGLVSRYGLIAYASSLDQIGPFGRTVEDAAIVLNAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + +P+Y +L ++ + +G+ KE + L +++ + + L+ GA++ IS Sbjct: 238 KVEIPNYVSSLKPDLRARGKLRIGVIKETFGNGLDSVVEQAVTKALDVLQSLGAEVHIIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P+ +Y +P+YYII+P+EAS+NLARYDGV+YG R E D +L MY TRS GFG EVK R Sbjct: 298 CPNFRYGVPSYYIIAPSEASANLARYDGVKYGFRAEDADNLLSMYTRTRSTGFGTEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+KIRTLIK+DF +AF+ VDV+++PT PT+AF G++ ++ Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKIRTLIKQDFEKAFKM-VDVLVSPTAPTTAFKTGEKVSD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM ND+ T+ VN+AGLP +S+P ++ +P+G+QLIGQ RE+ LF V E+ Sbjct: 417 PLSM--YLNDLMTIPVNLAGLPGLSIPCGFDQQGLPIGMQLIGQVLREDQLFQVAYAYEQ 474 Query: 483 EAGYF 487 + Sbjct: 475 STSWL 479 >gi|256845052|ref|ZP_05550510.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_36A2] gi|256718611|gb|EEU32166.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_36A2] Length = 485 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/488 (45%), Positives = 325/488 (66%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + E RD+ S ++SAVE+V+S+ + IE ++ +++ + A A++ D Sbjct: 1 MNNLYELTAKELRDKFLSNELSAVEIVNSFYERIEKVEDKIKSFVSLRKDIALDEAKKLD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ NG+ L GIPI IKD +G + +CS IL+ + Y +TV +KL + A+++ Sbjct: 61 EKKKNGEKLGRLAGIPIAIKDNILMEGQKSTSCSKILENYIGIYNATVVKKLKEEDAIII 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMGS+ +TS++ +PW PGGSSGG++A+VA S+G+D Sbjct: 121 GITNMDEFAMGSTTKTSFHHMTSNPWDL-----NRVPGGSSGGAAASVAAQEVPISLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D Sbjct: 176 TGGSVRQPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDVAICMNVIAGAD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DAT VPDY L++ I+G+ VG+PKEY ++ L+P I + L++ GA++ Sbjct: 236 DYDATVSKKEVPDYTEFLNKDIKGLKVGLPKEYFIEGLNPEIKNVIDNSVKALRELGAEV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 +E+SLPHT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG E Sbjct: 296 IEVSLPHTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD+++ +A+K+RTLIK+DF + VDVILTP P+ AF L Sbjct: 356 VKRRIMIGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNK-VDVILTPVAPSVAFKL-- 412 Query: 419 EENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +++ + +Y D+FT++ N+AG+PAIS+P L +P+G+Q +G+PF EETL V Sbjct: 413 --SDTKTPIELYLEDIFTISANLAGVPAISLPGGLV-NNLPVGVQFMGRPFDEETLIKVA 469 Query: 478 QIIEKEAG 485 +EK+ G Sbjct: 470 DALEKKIG 477 >gi|197124701|ref|YP_002136652.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anaeromyxobacter sp. K] gi|229485750|sp|B4UIV1|GATA_ANASK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|196174550|gb|ACG75523.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaeromyxobacter sp. K] Length = 492 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/486 (48%), Positives = 328/486 (67%), Gaps = 11/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E+ + +K IS+ ELV++ + I+ ++ ++ A++ V A +ARAAA +D R Sbjct: 7 ELCRLGLREAGAGVAAKAISSSELVEASLARIQATDGKLGAFLAVSADRARAAARAADAR 66 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ R +L+G+P+ +KD F TKG+ T A S IL+G+ P Y++TV ++L GAV++GK Sbjct: 67 AARGERRSELDGVPVAVKDIFVTKGVPTTAGSRILEGYLPPYDATVVERLEAAGAVIVGK 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSNE S Y P +PW TPGGSSGGS+A+VA AS+GTDTG Sbjct: 127 LNMDEFAMGSSNENSAYKPCHNPWDL-----SRTPGGSSGGSAASVAAGQVHASLGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR+PA+F G VG+KPTYGR SR G+++FA SLDQ G + R V D+A++L+ IAG+D Sbjct: 182 GSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPR 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T PV DY L+ +G+ VG+P+E+ L ++ + + + GA +V+ Sbjct: 242 DMTSSTRPVDDYLAPLEDGARGLRVGVPREWLSGGLDAGVEAAVRAALDTYRRLGATLVD 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +SLPH++Y + AYY+I+PAEASSNLARYDGVR+GLR + K + EMY +R G G E K Sbjct: 302 VSLPHSKYGIGAYYLIAPAEASSNLARYDGVRFGLRAADAKGLKEMYAESRERGLGAEPK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++YLRA+K+RTLI+RDF EAF +G DVI P TP+ AF LG+ Sbjct: 362 RRIMLGTYALSSGYYDAYYLRAQKVRTLIRRDFDEAF-RGCDVIAGPVTPSVAFKLGERT 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQI 479 + M D+FT+ N+A LP +SVP L +P+GLQL+G+PF E TLF + Sbjct: 421 GDPLQM--YLADIFTITCNLAALPGLSVPCGLEAASGLPVGLQLVGRPFDEATLFRAARA 478 Query: 480 IEKEAG 485 +E+E G Sbjct: 479 LERELG 484 >gi|260436069|ref|ZP_05790039.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp. WH 8109] gi|260413943|gb|EEX07239.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp. WH 8109] Length = 486 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/489 (46%), Positives = 319/489 (65%), Gaps = 13/489 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +S R +L+S ++S+ EL+D +++ +++S +NA++EV A +ARA A D+ G Sbjct: 1 MTISAWRQQLQSGEVSSRELIDQHLKRLDSSEPSLNAFVEVTADQARAEASRIDEARAAG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ IKD TKG+ T S +L+ F P YESTVT++LW G V++GK N+D Sbjct: 61 ETLGPLAGLPLAIKDNLCTKGVRTTCSSRMLEQFVPPYESTVTERLWRAGGVLVGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +G +PW + PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGATQNPWNT-----AHVPGGSSGGSAAAVAAGSCVASLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G +V D A LL+ IAG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGSVADVAELLQVIAGSDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ VPD+ L+QSI+G+ VG+ KE + + L P + + Q + L+ GA++VE+S Sbjct: 236 LDAAVPDFSAGLNQSIKGLKVGVIKECFDAEGLDPEVKASVQASAAQLEVLGAELVEVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + L M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAEDTESLAAMTARSRAEGFGAEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF Q VDV+LTPT P++AF G ++ Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAF-QSVDVLLTPTAPSTAFKAGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ VN+AGLPAISVP +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLADLLTIPVNLAGLPAISVPCGFSAAGLPIGMQLIGNVLDEPRLLQVAHQYEQA 472 Query: 484 AGYF--RPH 490 A F RP Sbjct: 473 AQVFASRPE 481 >gi|329897088|ref|ZP_08271842.1| Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium IMCC3088] gi|328921458|gb|EGG28845.1| Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium IMCC3088] Length = 487 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 227/460 (49%), Positives = 313/460 (68%), Gaps = 10/460 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR SAVEL Y+Q IE + Q+N+YI V +++A A A+ +D+R+ GDA L GIP Sbjct: 12 LRQGTRSAVELTQDYLQRIEQRDDQLNSYITVASERALAQAQAADERLSRGDASLLCGIP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T+ + T S +L F P Y++TV +++ GAV LGK N+DEFAMGSSNE Sbjct: 72 IAHKDLFCTRNLATTCASKMLANFVPPYDATVVERIDTAGAVTLGKTNLDEFAMGSSNEN 131 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S++G V +PW +D PGGSSGGS+AAVA LC A+ GTDTGGSIRQPA+F G G Sbjct: 132 SFFGAVKNPW-DLDCV----PGGSSGGSAAAVAAELCVAATGTDTGGSIRQPAAFCGITG 186 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SRLG++++A SLDQ G++ ++ D AILL+A+AG+D D+T P Y Sbjct: 187 LKPTYGRVSRLGMVAYASSLDQGGVMAKSADDCAILLEAMAGFDLKDSTSSGHPTIRYSE 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ SI G+ +GIP++Y + L + QQ + L+ GA++++I L T A+PAYY Sbjct: 247 QLNTSIAGLRIGIPRQYFNEQLDAKMAGILQQSLRELEKLGAQLIDIDLQQTGLAIPAYY 306 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 II+PAEAS+NL+RYDGVRYG R + KD+ ++Y +RS GFG+EV+ RI++GTY LSS Sbjct: 307 IIAPAEASTNLSRYDGVRYGYRCDNPKDLQDLYVRSRSEGFGKEVQRRILVGTYSLSSGY 366 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y +A++ R LI DF +AF Q VD+I +PTTP AF L + + +M D++ Sbjct: 367 YDAYYGQAQRARRLIAEDFAKAFTQ-VDIIASPTTPGPAFGLNSKTQDPVAM--YLEDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 T+AVN+AGLP +S+PA + + P+GLQLIG F E TL Sbjct: 424 TLAVNLAGLPGLSMPAGFYDHR-PVGLQLIGNHFDESTLL 462 >gi|148381211|ref|YP_001255752.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum A str. ATCC 3502] gi|153930955|ref|YP_001385586.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum A str. ATCC 19397] gi|153936208|ref|YP_001388992.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum A str. Hall] gi|166217661|sp|A7FYL3|GATA_CLOB1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217662|sp|A5I6Z3|GATA_CLOBH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148290695|emb|CAL84825.1| glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum A str. ATCC 3502] gi|152926999|gb|ABS32499.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum A str. ATCC 19397] gi|152932122|gb|ABS37621.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum A str. Hall] Length = 485 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 216/488 (44%), Positives = 321/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL+G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGSEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L IAG D+ Sbjct: 177 GSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSVIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V+ VPDY+++L + I+G +GIPKE+ D L + K+ ++ I L+ GA++ Sbjct: 237 DFTTVDKEVPDYKKSLTKDIKGKRIGIPKEFFGDGLDKNVRKSVEEAIKVLEANGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRSKNFKDAKDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F++ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKE-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMID-GLPVGLQIISDYFKEDVLFNLAYNY 472 Query: 481 EKEAGYFR 488 E+ + + Sbjct: 473 EQSVDFHK 480 >gi|194016160|ref|ZP_03054775.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Bacillus pumilus ATCC 7061] gi|194012515|gb|EDW22082.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Bacillus pumilus ATCC 7061] Length = 485 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/482 (47%), Positives = 319/482 (66%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE ++ L K++S +LVD + I + ++ A++ + +KARA A+E D+ + D Sbjct: 8 ISELKELLHKKELSVSDLVDESYKRINEVDGKVQAFLALDEEKARAYAKELDEAVGEKDE 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD TK + T A S IL F P Y++TV +L D AV +GKLNMDEF Sbjct: 68 LGLLFGMPIGVKDNIVTKDLRTTASSKILQNFDPIYDATVVNRLRDAEAVTIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S Y +PW PGGSSGGS+A+VA S+G+DTGGSIRQP Sbjct: 128 AMGSSTENSGYKATKNPWNL-----NTVPGGSSGGSAASVAAGEVPFSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYGR SR G+I+FA SLDQ G ITR V D+A +L+AIAG D+ DAT N Sbjct: 183 ASFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPITRNVEDNAYVLQAIAGVDQMDATSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPD+ +L I+GM + +PKEY + + ++ Q + L+ GA E+SLPH+ Sbjct: 243 VDVPDFLSSLTGDIKGMKIAVPKEYLGEGVGEEAKESVLQALKVLEGLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NLAR+DG+RYG R + ++++++Y+NTRS GFG EVK RIM+G Sbjct: 303 KYALATYYLLSSSEASANLARFDGIRYGYRTDNAENLIDLYKNTRSEGFGNEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G E S + Sbjct: 363 TFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFNIG--EKTSDPL 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+P ISVP +PLGLQ+IG+ F E T++ V E+ + Sbjct: 420 TMYANDILTIPVNLAGVPGISVPCGFA-NGLPLGLQIIGKHFDEGTVYRVAHAFEQATDH 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|85860809|ref|YP_463011.1| aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A [Syntrophus aciditrophicus SB] gi|109891991|sp|Q2LXM9|GATA_SYNAS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|85723900|gb|ABC78843.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit A [Syntrophus aciditrophicus SB] Length = 485 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/483 (48%), Positives = 323/483 (66%), Gaps = 9/483 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E ++++R +++ +V+S I+ +++YI ++ + A A+++D++ Sbjct: 2 ELYQLTIHELQNKIRQGGVTSTAIVNSVFGRIDAVEENVHSYITLMRESALEEAQKADEQ 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ +KD + T+G+ T S ILD F P Y++TV KL + GAV GK Sbjct: 62 IRTGEINALTGIPVALKDIYCTRGVRTTCGSLILDNFIPPYDATVVVKLREAGAVFTGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS ETSYYG +PW + PGGSSGGS+AAVA C A++G+DTGG Sbjct: 122 NMDEFAMGSSTETSYYGFTRNPWDL-----ERIPGGSSGGSAAAVAADECIAALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+ G VG+KPTYGR SR G+I+FA SLDQ G T+ V D AILL IAGYD D Sbjct: 177 SIRQPAALCGVVGMKPTYGRVSRFGLIAFASSLDQIGPFTKDVEDCAILLNVIAGYDLRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V + VPDY L++ I+G TVGIPKEY ++ + P + +Q I ++ GA+ EI Sbjct: 237 STSVPVDVPDYRDYLNRGIEGWTVGIPKEYFIEGIDPEVRGAIEQAIRTVEGLGARCREI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLPHT Y + YYII+PAEASSNLARYDGV+YG R + +D+L+MY+ TRS GFG EVK Sbjct: 297 SLPHTDYCVAVYYIIAPAEASSNLARYDGVKYGFRAADCRDLLDMYKKTRSAGFGTEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+M+GTY LSS YD++Y +A ++R LIKRDF EA + +VILTPTTPT AF +G++ + Sbjct: 357 RVMLGTYSLSSGYYDAYYKKASQVRGLIKRDFEEALKD-CNVILTPTTPTPAFTIGEKTD 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D+FT++ N+AG+P ISVP + +P+G+Q + F E L + E Sbjct: 416 DPMQM--YLSDIFTISANLAGIPGISVPCGYTQSGLPVGIQFLAGHFEEGKLLQIASAYE 473 Query: 482 KEA 484 + A Sbjct: 474 RNA 476 >gi|297205574|ref|ZP_06922970.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus jensenii JV-V16] gi|297150152|gb|EFH30449.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus jensenii JV-V16] Length = 479 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/475 (48%), Positives = 315/475 (66%), Gaps = 20/475 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEG 73 +L + ++SA EL D I I+ ++ ++NA+I V +E K N D A L G Sbjct: 14 KLANGEVSAQELADKTIANIKETDKKINAFITV---------DEDAKASENLDFANKLAG 64 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD T G+ T A SHILD F P Y++TV KL GA ++GK N+DEFAMGSSN Sbjct: 65 VPIAIKDNIVTNGLKTTAASHILDNFIPVYDATVVSKLKKAGATVVGKTNLDEFAMGSSN 124 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E SY+G V +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 125 ENSYFGAVHNPW----NLDK-VPGGSSGGSAAAVASGEIVAALGSDTGGSIRQPAAFNGI 179 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 GIKPTYGR SR G+I+FA SLDQ G++T+ V+D+A +L I+G DE D+T VPD+ Sbjct: 180 FGIKPTYGRVSRWGLIAFASSLDQIGVLTKRVQDAAEVLNVISGADEHDSTVSEKTVPDF 239 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +AL Q ++G+ V +PKEY D + + K Q+ I +LK+ GA I E+SLPHT+Y + Sbjct: 240 TKALGQDVKGLRVAVPKEYMSDAVDEGVRKAIQEQIDFLKENGAIINEVSLPHTKYVVST 299 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 300 YYIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSA 359 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD + +A K+RTLI RDF + FE DVI+ PTT AF +G E + M + ND Sbjct: 360 GSYDKFFRQASKVRTLICRDFDKIFEDN-DVIVGPTTTEPAFEIGSEVKDPIKMYN--ND 416 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 + T++ NM+G+PA SVPA L MP+GLQ++ + F EE++ V IE+ ++ Sbjct: 417 ILTISANMSGVPAASVPAGLV-NGMPVGLQIMAKRFDEESVLRVADFIERNNKFY 470 >gi|260887168|ref|ZP_05898431.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Selenomonas sputigena ATCC 35185] gi|330839063|ref|YP_004413643.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Selenomonas sputigena ATCC 35185] gi|260863230|gb|EEX77730.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Selenomonas sputigena ATCC 35185] gi|329746827|gb|AEC00184.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Selenomonas sputigena ATCC 35185] Length = 490 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 227/476 (47%), Positives = 312/476 (65%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 A E D L+ K+IS+ EL + ++ ++ AY+ + A A +D++I G+ Sbjct: 7 AAHELHDLLQRKEISSTELTKDVLARMDEVEGEVGAYLTQTRETALREAASADEKIARGE 66 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 LEGIP IKD TKG+ T S IL+ F P Y++TV +K+ V+LGKLNMDE Sbjct: 67 QIAFLEGIPGAIKDNICTKGVKTTCASKILENFVPPYDATVMEKIAAEHPVILGKLNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG S E S Y +PW ++D PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 127 FAMGGSTENSAYQKTHNPW-NLDCV----PGGSSGGSAAAVAAGTAIWALGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYGR SR G++++A SLDQ G +TR V D A +L IAG+D D+T Sbjct: 182 PASFCGIVGMKPTYGRVSRYGLVAYASSLDQIGPVTRDVTDCAHVLNVIAGHDVMDSTSS 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 PVPDY +AL + ++G+ +G+PKEY + + ++K ++ I+ + GA++ EI+LPH Sbjct: 242 TAPVPDYTKALTEEVKGLKIGLPKEYFVKGMDADVEKAIRKAIADFEAMGAEVTEITLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T YA+ YY+I+PAEA++NL RYDGV YG RV+G DI+EM TRS FG+EVK RIMIG Sbjct: 302 TDYAISTYYLIAPAEAATNLERYDGVSYGARVDGADIVEMMTKTRSEKFGEEVKRRIMIG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 Y LS+ YD++YL+A K+RTL+++DFT+AF++ VDVI+ PT PT AF +G E S + Sbjct: 362 NYALSAGYYDAYYLKALKVRTLVQQDFTDAFKK-VDVIMAPTAPTPAFKIG--EMVSDPL 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV +N+AGLP ISVP K MP+GLQ+IG+ EET+ E+ Sbjct: 419 KMYLQDICTVPLNLAGLPGISVPCGYSAKGMPIGLQIIGKALAEETILRAAYAYEQ 474 >gi|153940035|ref|YP_001392612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum F str. Langeland] gi|166217663|sp|A7GIK2|GATA_CLOBL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|152935931|gb|ABS41429.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum F str. Langeland] gi|295320599|gb|ADG00977.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum F str. 230613] Length = 485 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 216/488 (44%), Positives = 321/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDVK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL+G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGSEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L AIAG D+ Sbjct: 177 GSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + VPDY+++L + I+G +GIPKE+ D L + K+ ++ I L+ GA++ Sbjct: 237 DFTTADKEVPDYKKSLTKDIKGKRIGIPKEFFGDGLDKNVRKSVEEAIKVLEANGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRSKNFKDAKDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F++ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKE-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMVD-GLPVGLQIISDYFKEDVLFNLAYNY 472 Query: 481 EKEAGYFR 488 E+ + + Sbjct: 473 EQSVDFHK 480 >gi|237736763|ref|ZP_04567244.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium mortiferum ATCC 9817] gi|229420625|gb|EEO35672.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium mortiferum ATCC 9817] Length = 485 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 323/487 (66%), Gaps = 12/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L + SE R+++ +K++ ELV + IE ++ +++ + +KA A D Sbjct: 1 MKNLYKLTASEIREKILNKEVKVEELVKETFERIEKVEGKVGSFVHLRKEKALEEARILD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++I G+ L G+P+ IKD +KG T ACS IL + Y++T +KL + A+++ Sbjct: 61 EKIARGEKVGALAGVPVAIKDNMVSKGDITTACSKILGNYEGIYDATAVKKLKEADAIII 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMGS+ +TS++ +PW D+T PGGSSGG++A++A S+G+D Sbjct: 121 GITNMDEFAMGSTTKTSFHHLTKNPW---DATR--VPGGSSGGAAASIAAQEVYISLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYGR SR G+I+FA SLDQ G + ++V D A+ + IAG D Sbjct: 176 TGGSIRQPASFCGVVGMKPTYGRVSRYGLIAFASSLDQIGPMAKSVEDIALTMNVIAGAD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DAT VN VPDY + L+Q I+GM +G+PKEY +D ++P + + + I GA+I Sbjct: 236 DYDATVVNCEVPDYTKFLNQDIRGMKIGVPKEYFIDGINPEVRQIMEDAIEKFITLGAEI 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 VEISLPHT+YA+P YY+I+PAEASSNLAR+DGVRYG R + ++I ++Y N+RS GFG E Sbjct: 296 VEISLPHTKYAVPTYYVIAPAEASSNLARFDGVRYGYRSKNIQNINDLYVNSRSEGFGDE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD+++ +A+K+R IK DF AFE VDVI TP +P++AF L Sbjct: 356 VKRRIMIGTYVLSAGFYDAYFKKAQKVRAKIKEDFDRAFEN-VDVIFTPVSPSTAFRL-- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ + D+FT++ N+AG+P IS+PA + +P+G+QL+G+PF E L G Sbjct: 413 -DDKKTPIELYLEDIFTISANLAGIPGISIPAGKAQ-GLPVGIQLLGKPFGEGDLIKAGS 470 Query: 479 IIEKEAG 485 EK G Sbjct: 471 AFEKVRG 477 >gi|27262326|gb|AAN87444.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Heliobacillus mobilis] Length = 487 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/477 (48%), Positives = 317/477 (66%), Gaps = 11/477 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-R 69 E D L +K+ISA ELV + + IE + ++ A+I A A A + D +I G+A Sbjct: 10 ELHDLLVNKEISAAELVRAQAERIEAAEPKVQAFITRTLDDAMAQAAKVDAKIAAGEAIG 69 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 LEGIP+ +KD T G+ T S IL F P Y++TV KL + GA+++GK NMDEFAM Sbjct: 70 PLEGIPMALKDNMCTDGVRTTCASKILHNFVPPYDATVVTKLKEAGAILMGKCNMDEFAM 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPA+ Sbjct: 130 GSSTENSRFFATRNPWDI-----ERVPGGSSGGSAAAVAAGQAVFTLGSDTGGSIRQPAA 184 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYG SR G+++FA SLDQ G TR VRD+A ++ AIAGYD D+T + Sbjct: 185 FCGVVGMKPTYGAVSRFGLVAFASSLDQIGPFTRDVRDNARVMNAIAGYDLKDSTSAPVD 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 PDYE L QS++G +G+PKEY + + P + ++ + L+ GA+I E SLPHT+Y Sbjct: 245 YPDYEALLGQSVKGWRIGLPKEYFGEGIDPEVKAVIEKAVKVLEGLGAEIGECSLPHTEY 304 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 ALP YY+I+PAEASSNLARYDGVRYG R E D++ M++ TR+ GFG+EVK RIM+GTY Sbjct: 305 ALPVYYLIAPAEASSNLARYDGVRYGYRSEEAPDLITMFKKTRAEGFGEEVKRRIMLGTY 364 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS YD++YL+A+K+RTLIK DF +A+E+ DV+L+PT+PT AF G +N M Sbjct: 365 ALSSGYYDAYYLKAQKVRTLIKGDFDQAYEK-FDVLLSPTSPTVAFKFGDRTDNPLQM-- 421 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +D+ T++VN+AG+PA+++ A +P+GLQL+G+ F E L + E+ G Sbjct: 422 YLSDICTLSVNLAGIPALNINAGFA-NGLPVGLQLMGKAFDEAKLLQLAYAYEQATG 477 >gi|33865565|ref|NP_897124.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. WH 8102] gi|39931376|sp|Q7U7F4|GATA_SYNPX RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33632734|emb|CAE07546.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Synechococcus sp. WH 8102] Length = 486 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/489 (46%), Positives = 317/489 (64%), Gaps = 13/489 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 M +S R RL++ +S+ ELVD ++Q +E S +NA++EV A++ARA A+ D+ R Sbjct: 1 MTISAWRQRLQAGGVSSRELVDEHLQRLEQSEPSLNAFVEVTAERARADADRVDQARAAG 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+ IKD T+G+ T S +L+ F P YESTVT +LW GAV++GK N+D Sbjct: 61 EDLGPLAGLPLAIKDNLCTRGVRTTCSSRMLEQFVPPYESTVTDRLWGAGAVLVGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +G +PW + PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGATKNPWNI-----EHVPGGSSGGSAAAVASGSCLASLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G V D+A LL+ IAG+D+ D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGCVADAAELLQVIAGHDQRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + VP+Y L SI+G+ VG+ +E + + L + + Q + L+ GA++V++S Sbjct: 236 LTADVPNYSAGLAASIKGLRVGVIRECFEAEGLDAEVKASVQASAAQLEALGAELVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + + M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAEEAESLASMTARSRAEGFGAEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF+Q VDV+LTPT P+ AF G ++ Sbjct: 356 LIGTYALSAGYVDAYYRKAQQVRTLIRRDFDAAFQQ-VDVLLTPTAPSPAFKAGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ VN+AGLPAISVP +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLADLLTIPVNLAGLPAISVPCGFSAAGLPIGMQLIGNVLDEARLLQVAHQYEQA 472 Query: 484 AGYF--RPH 490 A F RP Sbjct: 473 ADVFAQRPE 481 >gi|237741724|ref|ZP_04572205.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 4_1_13] gi|294785662|ref|ZP_06750950.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fusobacterium sp. 3_1_27] gi|229429372|gb|EEO39584.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 4_1_13] gi|294487376|gb|EFG34738.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fusobacterium sp. 3_1_27] Length = 487 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/482 (46%), Positives = 325/482 (67%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S ++SAVE+V+S+ + IE ++ +++ + A A++ D++ NG Sbjct: 9 LTAKELRDKFLSDELSAVEIVNSFYERIEKVEDKIKSFVSLRKDIAINEAKKLDEKKKNG 68 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD +G + +CS IL+ + Y+STV +KL + A+++G NMD Sbjct: 69 EKLGKLAGIPIAIKDNILMEGGKSTSCSKILENYIGIYDSTVVKKLKEEDAIIIGVTNMD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TS++ +PW +D PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 129 EFAMGSTTKTSFHHMTSNPW-DLDRV----PGGSSGGAAASVAAQEVPISLGSDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 184 QPASFCGVVGLKPTYGRISRYGLMAFASSLDQIGTLAKTVEDVAICMNVIAGADDYDATV 243 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY + L++ I+G+ VG+PKEY ++ L+ I + L++ GA++VE+SLP Sbjct: 244 SKKEVPDYTKFLNKDIKGLKVGLPKEYFIEGLNTEIKNIIDNSVKALRELGAEVVEVSLP 303 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG EVK RIM Sbjct: 304 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAEVKRRIM 363 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTYVLS+ YD+++ +A+K+RTLIK+DF + VDVILTP P+ AF L +++ Sbjct: 364 IGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNK-VDVILTPVAPSVAFKL----SDTK 418 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L +P+G+Q +G+PF EETL V +EK+ Sbjct: 419 TPIELYLEDIFTISANLAGVPAISLPGGLVN-NLPVGVQFMGRPFDEETLIKVADALEKK 477 Query: 484 AG 485 G Sbjct: 478 IG 479 >gi|20807102|ref|NP_622273.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase [Thermoanaerobacter tengcongensis MB4] gi|22095719|sp|Q8RC40|GATA_THETN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|20515594|gb|AAM23877.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Thermoanaerobacter tengcongensis MB4] Length = 488 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/481 (47%), Positives = 326/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + V E ++ L +++SA E+ SY++ I+ +++A + + + A A+ +D+ Sbjct: 2 ELYSLTVHELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEM 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I NG+A+DL GIP+ IKD +T+GI T S +L+ + P Y +TV ++L + G V+LGK Sbjct: 62 IKNGEAKDLTGIPVIIKDNISTEGIRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AAVA A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAVAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L AIAG+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNAIAGHDPMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V + PDY L + I+G+ +G+ KE+ + + +T ++ I +D GA+I++I Sbjct: 237 STSVKIEKPDYTSYLKEDIKGLRIGVAKEFFGAGIEEGVKETVEKAIKVFEDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG + +D+++MY +RS GFG+EVK Sbjct: 297 SVPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAKNYEDLVDMYMTSRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFERAFEK-CDVIVGPTSPTVAFKIGERTN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLPAIS+P L E +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPAISIPCGLSE-GLPVGLQIIGKHFDEGRILNVAYAFE 472 Query: 482 K 482 K Sbjct: 473 K 473 >gi|114565929|ref|YP_753083.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318948|sp|Q0AZZ2|GATA_SYNWW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|114336864|gb|ABI67712.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 487 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 320/487 (65%), Gaps = 13/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + V E +D+L + +IS+ ++V S I + A+I + + A A D++ Sbjct: 2 DLYKLTVHELQDKLLAGEISSEDIVKSLFSRIALVEEKAQAFITLCEETALEGARRIDQQ 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G ++GIP G+KD F T+GI T S +L+ F P YEST ++ L + G ++LGKL Sbjct: 62 DEYGG---IKGIPYGLKDLFCTRGIKTTCASRMLENFVPSYESTASKLLNEKGGILLGKL 118 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + P +PW + PGGSSGG +AAVA ++ +DTGG Sbjct: 119 NLDEFAMGSSTEQSAFFPSRNPWDW-----ERVPGGSSGGCAAAVAAGEIPFALASDTGG 173 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS+ G VG+KPTYGR SR G+ +FA SLDQ GI++R VRD A++LK IAG D D Sbjct: 174 SIRQPASYCGIVGLKPTYGRVSRWGVAAFASSLDQVGILSRDVRDCALILKIIAGKDPLD 233 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 AT + VP+Y LD ++GM + P+EY +++ +I + + ++ GA + E+ Sbjct: 234 ATSADTEVPNYCAFLDGEVKGMRIAYPREYFQHWVTESIRTAVMKALRKFEELGAIVEEV 293 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLPH++YALPAYYI++PAEAS+NLAR+DGVRYGLR E ++++M+ +R+ GFG EVK Sbjct: 294 SLPHSEYALPAYYIVAPAEASTNLARFDGVRYGLRDDEADNVIDMFSLSRAQGFGPEVKR 353 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++YL+A K+R LI DF + F + D+I++PTTPT+AF LG++ + Sbjct: 354 RIMLGTYALSSGYYDAYYLKAMKVRRLIASDFAKVF-RDFDLIVSPTTPTTAFKLGEQID 412 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ ++ ND TV VNMAGLP IS+P AL + +P+G+QLIG+ F E TL E Sbjct: 413 DTLTL--YMNDALTVPVNMAGLPGISIPCAL-DDGLPVGMQLIGRAFDEATLLKAAYAFE 469 Query: 482 KEAGYFR 488 + Y R Sbjct: 470 QNTDYHR 476 >gi|229588405|ref|YP_002870524.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas fluorescens SBW25] gi|259647220|sp|C3K6Y4|GATA_PSEFS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229360271|emb|CAY47128.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas fluorescens SBW25] Length = 483 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 313/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + + I + ++N++I + + A + A+ +D R Sbjct: 1 MHHMTLAEIARGLADKKFSSEELTKTLLARIAEHDPKVNSFISLTEELALSQAKAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+GI T S +LD F+ Y++TV KL GAV LGK N Sbjct: 61 ANGEQGALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVSKLAAAGAVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+SYYG V +PW + D G S G ++A A FL AA+ TDTGGS Sbjct: 121 MDEFAMGSANESSYYGAVKNPW----NLDHVPGGSSGGSAAAVAARFLPAAT-ATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FT G+KPTYGR SR G+I++A SLDQ G + RT D AILL+ +AG+D+ D+ Sbjct: 176 IRQPAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDKQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ SI+G+ +G+PKEY L P I + + L+ GA I EIS Sbjct: 236 TSIDEPVPDYSASLNTSIKGLRIGVPKEYFSAGLDPRIAELVHNSVKTLEGLGAVIKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNNQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPKDLTDLYKRSRGEGFGAEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AFE+ VDVIL PTTP A+ +G + + Sbjct: 356 IMVGAYALSAGYYDAYYLKAQKIRRLIKNDFMAAFEE-VDVILGPTTPNPAWKIGAKTGD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDLYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|117923992|ref|YP_864609.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Magnetococcus sp. MC-1] gi|166217679|sp|A0L5G0|GATA_MAGSM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|117607748|gb|ABK43203.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Magnetococcus sp. MC-1] Length = 485 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/486 (48%), Positives = 326/486 (67%), Gaps = 10/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + + E+ D+L +K+IS+VEL + + I N +NA++ V A+KA AAA+ +D RI Sbjct: 3 LNELTLREAADKLATKEISSVELTQACLDQIAKHNPTINAFVTVDAEKALAAAQAADARI 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L GIPI KD F T + T S +L+ F P +++T+T L GAV+LGK N Sbjct: 63 AAGNGAPLTGIPIAHKDIFNTTDMRTTCSSRMLENFIPPFDATITTHLRQAGAVILGKTN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +DEFAMGSS ETSY+G +PW + + TPGGSSGGSSAA+A + + GTDTGGS Sbjct: 123 LDEFAMGSSTETSYFGASRNPWDT-----QRTPGGSSGGSSAAIAANMAICATGTDTGGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPAS T G+KPTYGRCSR GII+FA SLDQAG +TRT D+A+LL + YD D+ Sbjct: 178 IRQPASLTNLTGLKPTYGRCSRYGIIAFASSLDQAGPMTRTAEDAAMLLNVMVSYDPKDS 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + P PD+ +AL ++G+ +GI EY D L+ + + + GA++V IS Sbjct: 238 TSIQSPAPDFTQALTGDVKGLKIGIAAEYFGDGLNDEVRAAIETAQQQYQAMGAELVPIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LP++ YA+P YYIISPAE SSNLARYDGV++G R E KDI ++Y +RS GFG EVK R Sbjct: 298 LPNSGYAIPTYYIISPAECSSNLARYDGVKFGYRCEEPKDIRDLYFRSRSEGFGDEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTYVLSS YD++Y +A++ R LI +F AFE+ VD+ILTPT+PT+AF G++++ Sbjct: 358 IMLGTYVLSSGYYDAYYRKAQQARRLIADEFKAAFEK-VDLILTPTSPTTAFKFGEKDD- 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +D++T+ VN+AGLP ISVP K +P+G+QLIG+P EETL ++ Sbjct: 416 --PVQMYLSDIYTINVNLAGLPGISVPCGFDSKGLPIGMQLIGRPLDEETLLRSADAYQR 473 Query: 483 EAGYFR 488 + + + Sbjct: 474 QTDWHK 479 >gi|226310281|ref|YP_002770175.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Brevibacillus brevis NBRC 100599] gi|254790381|sp|C0Z4E4|GATA_BREBN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226093229|dbj|BAH41671.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Brevibacillus brevis NBRC 100599] Length = 490 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/488 (46%), Positives = 327/488 (67%), Gaps = 12/488 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE LR+K+IS +LV + I +I+ + ++ + + V + A A A + D+R++ G+ Sbjct: 8 LSEIHSALRAKEISVTDLVQASIASIKEHDGEIKSVLHVDEEGALAHARQLDERLVKGNE 67 Query: 69 RD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P G+KD TK I T S L + P ++ TV++K+ D +V++ KLNMDE Sbjct: 68 ELGLLYGLPAGLKDNLVTKDIRTTCASKFLANYDPVHDGTVSKKVKDADSVIVAKLNMDE 127 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG SNE S + P +PW +TD + PGGSSGGS+AA+A ++G+DTGGSIRQ Sbjct: 128 FAMGGSNENSGFFPAKNPW----NTD-YVPGGSSGGSAAAMAARHFYYTLGSDTGGSIRQ 182 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G +T+ V DSA +L+AIAG+DE D+T Sbjct: 183 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPVTKNVEDSAYVLQAIAGHDEYDSTSA 242 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ VP+Y AL ++G+ +G+PKE + + P + + L+ GA E+S+PH Sbjct: 243 NVDVPNYLSALTGDVKGLRIGVPKELIGEGIDPEVRDAVLAALKQLESMGATWSEVSMPH 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 T+YA+PAYY++S +EASSNLAR+DGVRYG+R + +++E+Y+ +RS GFGQEVK RIM+ Sbjct: 303 TEYAVPAYYLLSSSEASSNLARFDGVRYGVRADNAANLIELYKESRSQGFGQEVKRRIML 362 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A+++RTLI +DF F DVIL PTTP++AF +G EN Sbjct: 363 GTYALSSGYYDAYYKKAQQVRTLIIQDFNSIFAD-YDVILHPTTPSTAFKVG--ENVDDP 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + D+ TV VN+AGLPAISVP + +P+GLQ++G+ F E T+ V E+ AG Sbjct: 420 VKMYLEDICTVPVNLAGLPAISVPCGFSKNGLPIGLQIVGRAFDESTVLRVAHAYEQTAG 479 Query: 486 YF-RPHKW 492 ++ R +W Sbjct: 480 FYGRKPEW 487 >gi|90022836|ref|YP_528663.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Saccharophagus degradans 2-40] gi|109891983|sp|Q21FS8|GATA_SACD2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|89952436|gb|ABD82451.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Saccharophagus degradans 2-40] Length = 484 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/484 (46%), Positives = 322/484 (66%), Gaps = 10/484 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L++K S+VE+ ++ I+ +++ N++I + ++A A A +D R+ Sbjct: 1 MHNLTIAEIIQGLKNKSFSSVEITQHFLNRIKTLDTEYNSFITLTEEQALAQATAADARL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 GDA L G+P+ KD F T G+ T S +LD F P Y++TV +G V+LGK N Sbjct: 61 AAGDAPALCGVPLAHKDIFCTNGVRTSCGSKMLDNFVPPYDATVVTNYSQDGVVILGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETSYYGPV +PW + PGGSSGGS+AAVA L + TDTGGS Sbjct: 121 MDEFAMGSSNETSYYGPVKNPWDT-----NCVPGGSSGGSAAAVAARLVPGATATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G GIKPTYGR SR G+I+FA SLDQAG +TRT D+A++L+++A YD D+ Sbjct: 176 IRQPAALCGITGIKPTYGRVSRWGMIAFASSLDQAGTMTRTAEDAALMLQSMASYDRKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TCV+ P+ DY L+ + G+ +GIPKEY + L+P + Q I + GA + E+S Sbjct: 236 TCVDHPIDDYSVNLNAPLAGLKIGIPKEYFGEGLNPGTAEAVQAAIKTYEAMGATVQEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPHT A+PAYY+I+PAE S+NL+R+DGVRYG R + KD+ ++Y +R GFG+EVK R Sbjct: 296 LPHTHLAVPAYYVIAPAECSANLSRFDGVRYGHRCDNPKDLEDLYRRSRGEGFGEEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ YD++Y +A+++R LIK+DF + F Q VDVIL PT+P+ AF G + ++ Sbjct: 356 ILVGTYALSAGFYDAYYRKAQQVRRLIKQDFVDVFSQ-VDVILGPTSPSPAFEFGSKGSD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D++T+A N+AGLP +S+P + K P+GLQLIG F E L ++ + Sbjct: 415 PVAM--YLEDIYTIATNLAGLPGMSIPCGQVDGK-PVGLQLIGNYFAEAKLLNIAHKFQT 471 Query: 483 EAGY 486 E + Sbjct: 472 ETDF 475 >gi|317051994|ref|YP_004113110.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfurispirillum indicum S5] gi|316947078|gb|ADU66554.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfurispirillum indicum S5] Length = 480 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/479 (47%), Positives = 323/479 (67%), Gaps = 10/479 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +++ + L + +I++ +LV++ ++ I + Q+ + +V ++A A A +DKR G+ Sbjct: 7 LTQLQHALATSEITSQQLVEACLENIRTKDDQLQVFNQV-NEQALAEATSADKRRSLGEK 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI +KD KG+ T S +L + Y++TV +L + GA+++GK +MDEFA Sbjct: 66 LPLLGIPIAVKDNINVKGLATTCSSRMLANYTAIYDATVATRLREAGAIVIGKASMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSN+T++ +PW D T PGGSSGGS+AAVA + A++G+DTGGSIRQPA Sbjct: 126 MGSSNQTAFQKQTRNPW---DPTR--VPGGSSGGSAAAVAARMAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG+KPTYG SR G+++FA SLDQ G IT +V D+A++L IAG+D D+T + Sbjct: 181 AFCGVVGLKPTYGTVSRFGLVAFASSLDQIGPITHSVADAALMLNVIAGHDHNDSTSLAF 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PDY + + I G+ VG+P+EY ++ L+PTI + G+ LK+ GA + EISLPHT Sbjct: 241 DKPDYTSCVGKDIAGLRVGLPREYFIEGLNPTIRRQVMAGVEALKEQGAIVKEISLPHTD 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 YA+ YYII+ AEASSNLARYDGVRY R EG D+++MY TRS GFG EVK RIM+GT Sbjct: 301 YAVATYYIIATAEASSNLARYDGVRYTHRSEGATDLIDMYTTTRSQGFGPEVKRRIMLGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLSS YD++Y +A+K+RTLI RDF +AF VDVI+TPTTP++AF G E N+ + Sbjct: 361 YVLSSGYYDAYYRKAQKVRTLIARDFQQAFSD-VDVIVTPTTPSTAFACG--EKNTSPLD 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D+FT++ N+AG+P +S+P L EK +P+GLQL G+ F E L G IE G+ Sbjct: 418 MYLEDIFTLSCNLAGIPGMSIPCGLDEKGLPIGLQLYGRHFGEGDLIRAGSAIEHSIGF 476 >gi|157691435|ref|YP_001485897.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus pumilus SAFR-032] gi|166989677|sp|A8FAS0|GATA_BACP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157680193|gb|ABV61337.1| glutamyl-tRNA amidotransferase subunit A [Bacillus pumilus SAFR-032] Length = 485 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/482 (47%), Positives = 318/482 (65%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE ++ L K++S +LVD + I + ++ A++ + +KARA A+E D+ + D Sbjct: 8 ISELKELLHKKELSVSDLVDESYKRINEVDGKVQAFLALDEEKARAYAKELDEAVGEKDE 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD TK + T A S IL F P Y++TV +L D V +GKLNMDEF Sbjct: 68 LGLLFGMPIGVKDNIVTKDLRTTASSKILQNFDPIYDATVVNRLRDAEVVTIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S Y +PW PGGSSGGS+A+VA S+G+DTGGSIRQP Sbjct: 128 AMGSSTENSGYKATKNPWNL-----NTVPGGSSGGSAASVAAGEVPFSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYGR SR G+I+FA SLDQ G ITR V D+A +L+AIAG D+ DAT N Sbjct: 183 ASFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPITRNVEDNAYVLQAIAGVDQMDATSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPD+ +L I+GM + +PKEY + + ++ Q + L+ GA E+SLPH+ Sbjct: 243 VDVPDFLSSLTGDIKGMKIAVPKEYLGEGVGEEAKESVLQALKVLEGLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NLAR+DG+RYG R + ++++++Y+NTRS GFG EVK RIM+G Sbjct: 303 KYALATYYLLSSSEASANLARFDGIRYGYRTDNAENLIDLYKNTRSEGFGNEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G E S + Sbjct: 363 TFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--EKTSDPL 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+P ISVP +PLGLQ+IG+ F E T++ V E+ + Sbjct: 420 TMYANDILTIPVNLAGVPGISVPCGFA-NGLPLGLQIIGKHFDEGTVYRVAHAFEQATDH 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|19704089|ref|NP_603651.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328702|ref|ZP_06871219.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|23821594|sp|Q8R679|GATA_FUSNN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|19714291|gb|AAL94950.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154301|gb|EFG95102.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 487 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 220/482 (45%), Positives = 321/482 (66%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S ++SA E+V+S+ + IE ++ +++ + KA A + D++ NG Sbjct: 9 LTAKELRDKFLSNELSAEEIVNSFYERIEKVEDKIKSFVSLRKDKALDEARKLDEKRKNG 68 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD +G + +CS IL+ + Y++TV +KL + A+++G NMD Sbjct: 69 EKLGRLAGIPIAIKDNILMEGQKSTSCSKILENYIGIYDATVVKKLKEEDAIIIGITNMD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TS++ +PW PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 129 EFAMGSTTKTSFHHKTSNPWDL-----NRVPGGSSGGAAASVAAQEVPISLGSDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 184 QPASFCGVVGFKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAGVDDYDATV 243 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY L++ I+G+ +G+PKEY ++ L+P I + LK+ GA++VEISLP Sbjct: 244 SKKEVPDYTEFLNKDIKGLKIGLPKEYFIEGLNPEIKNVVDNSVKALKELGAEVVEISLP 303 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG EVK RIM Sbjct: 304 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAEVKRRIM 363 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTYVLS+ YD+++ +A+K+RTLIK+DF + VDVILTP P+ AF L +++ Sbjct: 364 IGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNE-VDVILTPVAPSVAFKL----SDTK 418 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF EE L + +EK+ Sbjct: 419 TPIELYLEDIFTISANLAGVPAISLPGGLVD-NLPVGVQFMGKPFDEEILIKIADALEKK 477 Query: 484 AG 485 G Sbjct: 478 IG 479 >gi|220919421|ref|YP_002494725.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|254790374|sp|B8JBQ1|GATA_ANAD2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219957275|gb|ACL67659.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 492 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/486 (48%), Positives = 328/486 (67%), Gaps = 11/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E+ + +K IS+ ELV++ + I+ ++ ++ A++ V A +ARAAA +D R Sbjct: 7 ELCRLGLREAGAGVAAKAISSSELVEASLARIQATDGKLGAFLAVSADRARAAARAADAR 66 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ R +L+G+P+ +KD F TKG+ T A S IL+G+ P Y++TV ++L GAV++GK Sbjct: 67 AARGERRSELDGVPVAVKDLFVTKGVPTTAGSRILEGWLPPYDATVVERLEAAGAVIVGK 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSSNE S Y P +PW TPGGSSGGS+A+VA AS+GTDTG Sbjct: 127 LNMDEFAMGSSNENSAYKPCHNPWDL-----SRTPGGSSGGSAASVAAGQVHASLGTDTG 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR+PA+F G VG+KPTYGR SR G+++FA SLDQ G + R V D+A++L+ IAG+D Sbjct: 182 GSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPR 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T PV DY L+ +G+ VG+P+E+ L ++ + + + GA +V+ Sbjct: 242 DMTSSTRPVDDYLAPLEDGARGLRVGVPREWLSGGLDAGVEAAVRAALDTYRRLGATLVD 301 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +SLPH++Y + AYY+I+PAEASSNLARYDGVR+GLR + K + EMY +R G G E K Sbjct: 302 VSLPHSKYGIGAYYLIAPAEASSNLARYDGVRFGLRAADAKGLKEMYAESRERGLGAEPK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++YLRA+K+RTLI+RDF EAF +G DVI P TP+ AF LG+ Sbjct: 362 RRIMLGTYALSSGYYDAYYLRAQKVRTLIRRDFDEAF-RGCDVIAGPVTPSVAFKLGERT 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQI 479 + M D+FT+ N+A LP +SVP L +P+GLQL+G+PF E TLF + Sbjct: 421 GDPLRM--YLADIFTITCNLAALPGLSVPCGLEAASGLPVGLQLVGRPFDEATLFRAARA 478 Query: 480 IEKEAG 485 +E+E G Sbjct: 479 LERELG 484 >gi|34763153|ref|ZP_00144121.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887182|gb|EAA24285.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 487 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 325/482 (67%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S ++SAVE+V+S+ + IE ++ +++ + A A++ D++ NG Sbjct: 9 LTAKELRDKFLSDELSAVEIVNSFYERIEKVEDKIKSFVSLRKDIAIDEAKKLDEKKKNG 68 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD +G + +CS IL+ + Y+STV +KL + A+++G NMD Sbjct: 69 EKLGRLAGIPIAIKDNILMEGQKSTSCSKILENYIGIYDSTVVKKLKEEDAIIIGITNMD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TS++ +PW +D PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 129 EFAMGSTTKTSFHHMTSNPW-DLDRV----PGGSSGGAAASVAAQEIPISLGSDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 184 QPASFCGVVGLKPTYGRISRYGLMAFASSLDQIGTLAKTVEDVAICMNVIAGADDYDATV 243 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY + L++ I+G+ +G+PKEY ++ L+ I + L++ GA++VE+SLP Sbjct: 244 SKKEVPDYTKFLNKDIKGLKIGLPKEYFIEGLNTEIKNVIDNSVKALRELGAEVVEVSLP 303 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TRS GFG EVK RIM Sbjct: 304 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAEVKRRIM 363 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTYVLS+ YD+++ +A+K+RTLIK+DF + VDVILTP P+ AF L +++ Sbjct: 364 IGTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNK-VDVILTPVAPSVAFKL----SDTK 418 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L +P+G+Q +G+PF EETL V +EK+ Sbjct: 419 TPIELYLEDIFTISANLAGVPAISLPGGLVN-NLPVGVQFMGRPFDEETLIKVADALEKK 477 Query: 484 AG 485 G Sbjct: 478 IG 479 >gi|56751984|ref|YP_172685.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus elongatus PCC 6301] gi|81561606|sp|Q5N0K5|GATA_SYNP6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56686943|dbj|BAD80165.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus elongatus PCC 6301] Length = 479 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 240/487 (49%), Positives = 323/487 (66%), Gaps = 19/487 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L K+ SAVE+ ++ +Q IE Q+ +++ V A +A A A+ D+RI G+ Sbjct: 3 SIRELHSQLVRKERSAVEIAEAALQRIETLEPQLKSFLHVTADQAIAQAKAVDQRIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD T+GI T S IL GF P YESTVTQ+L + GAV +GK N+DE Sbjct: 63 EISLLAGIPIGIKDNLCTRGIPTTCASKILQGFVPPYESTVTQRLAEAGAVAVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA+GSS E S Y +PW D T PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAVGSSTENSAYQTTANPW---DLTR--VPGGSSGGSAAAVAADECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYG SR G++++A SLDQ G +R+V D+AILL AIAG+D DAT + Sbjct: 178 PAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKDATSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + VPDY + L S+ G+ VG+ E D SP + Q + L+ GA+I EIS P Sbjct: 238 KVEVPDYTQFLKPSLAGIKVGVITETVTD--SPA-GQAMQAALEVLQGLGAEIREISCPR 294 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 Y LPAYYII+P+EAS+NLARYDGV+YG RV E + +++MY TR+ GFG EVK RIMI Sbjct: 295 FAYGLPAYYIIAPSEASANLARYDGVKYGYRVEEAETLIDMYCRTRAEGFGSEVKRRIMI 354 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++YL+A+K+RTLIK+DF AF + VDV+++PTTPT+AF G++ + S Sbjct: 355 GTYALSAGYYDAYYLKAQKVRTLIKQDFEAAFAE-VDVLVSPTTPTTAFKAGEKTADPLS 413 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D+ T+ VN AGLP +S+P E +P GLQ+IG RE+ Q++ Sbjct: 414 M--YLSDLMTIPVNSAGLPGLSLPCGFDEAGLPYGLQIIGNVLRED------QVLHTAYA 465 Query: 486 YFRPHKW 492 Y + +W Sbjct: 466 YEQATEW 472 >gi|330807533|ref|YP_004351995.1| Amidase, (glutamyl-tRNA(Gln) amidotransferase), subunit A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375641|gb|AEA66991.1| Amidase, (glutamyl-tRNA(Gln) amidotransferase), subunit A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 483 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/476 (47%), Positives = 314/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + + A + A+ +D R Sbjct: 1 MHHMTLAEIARGLADKKFSSEELTQVLLARIAQLDPQLNSFISLTQELALSQAKAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 ANGETGALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVAKLAAAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+SYYG V +PW + PGGSSGGS+AAVA L A+ TDTGGS Sbjct: 121 MDEFAMGSANESSYYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPAATATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FT G+KPTYGR SR G+I++A SLDQ G + RT D AILL+ +AG+D D+ Sbjct: 176 IRQPAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDPNDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S+QG+ +G+PKEY L P I + + L+ GA I EIS Sbjct: 236 TSIDEPVPDYSASLNGSLQGLRIGVPKEYFSAGLDPRIAELVHNSVKELEKLGAVIKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E ++++++Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPENLIDLYKRSRGEGFGAEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR L+K DF AF + VD+IL PTTP A+ LG + N Sbjct: 356 IMVGAYALSAGYYDAYYLKAQKIRRLVKNDFMAAFNE-VDIILGPTTPNPAWKLGAK--N 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 413 SDPVAEYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|121533512|ref|ZP_01665340.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermosinus carboxydivorans Nor1] gi|121308071|gb|EAX48985.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermosinus carboxydivorans Nor1] Length = 487 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/476 (47%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLE 72 ++L K++SA E+ ++ I+ ++ AYI ++A A++ D++I G+ L Sbjct: 13 EKLLKKEVSAREITEAVFGRIDAVEGEIRAYITQTREQALEQAQKVDEKIRRGEKISPLA 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P IKD TKGI T S IL F P Y++TV KL N AV+ GK NMDEFAMGSS Sbjct: 73 GLPGAIKDNICTKGIKTTCGSKILANFVPPYDATVMVKLAANDAVIAGKANMDEFAMGSS 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + +PW + SSGGS+AAVA ++G+DTGGSIRQPA++ G Sbjct: 133 TENSAFFASRNPWDTAAVPGG-----SSGGSAAAVAAGEAVWALGSDTGGSIRQPAAYCG 187 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYG SR G++++A SLDQ G ITR V D A++L IAG+D D+T + VPD Sbjct: 188 VVGLKPTYGLVSRFGLVAYASSLDQIGPITRDVTDCALVLNVIAGHDAHDSTSIRTDVPD 247 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y AL ++G+ +G+PKEY + L +++ ++ + + GA+IVE+S+PHT+YAL Sbjct: 248 YTTALVPDVKGLKIGLPKEYFVAGLDSAVEQAVRRAVDQFRAMGAEIVEVSMPHTEYALA 307 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+PAEASSNLARYDGV +G R EG DI+ MY+ TRS GFG EVK RIM+GTY LSS Sbjct: 308 VYYLIAPAEASSNLARYDGVGFGYRAEGNDIVSMYKRTRSEGFGAEVKRRIMLGTYALSS 367 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +A K+RTL+KR+F AFEQ VDV++TPT PT+AF G++ N+ +M D Sbjct: 368 GYYDAYYNKALKVRTLVKRNFDRAFEQ-VDVLITPTAPTTAFKAGEKVNDPLAM--YLQD 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +FT+ VN+AG+PAIS+P +P+GLQLIG+P E T+ E+ Y++ Sbjct: 425 IFTIPVNLAGVPAISLPCGFA-GNLPIGLQLIGKPLGEATILRAAYAFEQNNDYYK 479 >gi|227432078|ref|ZP_03914091.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352160|gb|EEJ42373.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 494 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/479 (46%), Positives = 319/479 (66%), Gaps = 12/479 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++L +K++SAV+L + + I ++ ++NA+I +A A A++ D++ + + L Sbjct: 20 HNQLVNKEVSAVDLTRASLDNISKTDDKLNAFISTNPDEAIAQAQKIDEK--SDFSNVLT 77 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+G+KD ATKGI T SHIL+GF+P Y +TV +KL + GAV +GK NMDEFAMGSS Sbjct: 78 GLPLGLKDNMATKGIQTTGASHILEGFKPIYNATVVEKLQNLGAVSVGKTNMDEFAMGSS 137 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSYY + W PGGSSGGS+AAVA ++G+DTGGSIRQPA+F G Sbjct: 138 TETSYYKQTSNAWDHSK-----VPGGSSGGSAAAVAAGQVPFALGSDTGGSIRQPAAFNG 192 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ + A SLDQ G T+TV+D+A +L AIAG+DE D+T VPD Sbjct: 193 IVGLKPTYGRVSRWGLFAMASSLDQIGPFTKTVKDNATVLNAIAGFDEKDSTSSQREVPD 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L ++G+ + +PKEY + + P + K + I+ L+ GA + E+SLPHT+Y + Sbjct: 253 FTAKLSGDVKGLKIAVPKEYFGEGIDPKVAKQVKAAIAQLEALGATVDEVSLPHTKYGVA 312 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII +EASSNL RYDGVRYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS Sbjct: 313 AYYIIMSSEASSNLQRYDGVRYGFRADDVKNLEDLYVKTRSEGFGDEVKRRIMLGTFSLS 372 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A KIRTL+ DF + FE DVI+ PT PT+A+ LG+E ++ +M Sbjct: 373 AGAYDAFFKKAAKIRTLLIEDFNKVFEN-YDVIVGPTAPTAAYGLGEEVDDPTAM--YLA 429 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 DV T+ VN+AGLP +SV A + +P+GLQ+IG+PF E+T++ G E+ + F H Sbjct: 430 DVLTIPVNLAGLPGLSVNAGFVD-GLPVGLQIIGKPFDEQTVYQTGYAYEQASRLFEQH 487 >gi|225873474|ref|YP_002754933.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium capsulatum ATCC 51196] gi|254790372|sp|C1F857|GATA_ACIC5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225792006|gb|ACO32096.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium capsulatum ATCC 51196] Length = 476 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/480 (47%), Positives = 316/480 (65%), Gaps = 10/480 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F S +R+ ++ A + + AI+ N ++NAY+ + A A A D Sbjct: 1 MEFQTTLPSIRAVRTGEVRAEAALQECLGAIDAHNGEVNAYLSLDRDGAGARARHIDALS 60 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 A+ + G+P GIKD +G+ A S IL+G+RP Y +T Q+L D GAV++GKL Sbjct: 61 REERAKLPMGGVPFGIKDVLTVEGMPATASSKILEGYRPPYTATAVQRLIDAGAVLVGKL 120 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N DEFAMGSSNE S YGPV +P R++D PGGSSGGS+AAVA + A++GTDTGG Sbjct: 121 NCDEFAMGSSNENSAYGPVKNP-RALDRV----PGGSSGGSAAAVAANMAVATLGTDTGG 175 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G VG+ PTYGR SR G+I+FA SLD+ G TVRD+A +L IAG+D D Sbjct: 176 SIRQPASFCGVVGVLPTYGRVSRYGLIAFASSLDRVGPFAHTVRDAAEVLGVIAGHDPMD 235 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 AT ++PVPDY LD ++G+ +G+P EY + L P + + + I L+ AGA++ I Sbjct: 236 ATSSSVPVPDYTEKLDAGVKGLRLGVPAEYFAEGLDPEVKRAVEGTIEQLRAAGAEVKPI 295 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLPHT YA+P YY+I+ AEAS+NLAR+DGVRYGLR E + MY TR +GFG EVK Sbjct: 296 SLPHTPYAIPTYYVIATAEASANLARFDGVRYGLRAPEANTLAAMYRQTRDLGFGAEVKR 355 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS+ YD++Y +A+++R L+ +DF AFE+ VD I+TPT PT AF LG++ + Sbjct: 356 RILLGTYVLSAGYYDAYYKKAQQVRRLLAQDFLRAFEE-VDAIVTPTAPTPAFKLGEKSD 414 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + SM D++TV N+AG+ SVP + +P+G+Q++G+ F E T+ VGQ +E Sbjct: 415 DPLSM--YLADIYTVTANLAGICGASVPCGTSREGLPIGIQILGRHFDEATVLRVGQAVE 472 >gi|310643935|ref|YP_003948693.1| glutamyl-tRNA(gln) amidotransferase subunit a [Paenibacillus polymyxa SC2] gi|309248885|gb|ADO58452.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus polymyxa SC2] Length = 485 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 323/482 (67%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E ++L K+IS +LV ++ I+ ++ AYI V ++ARA+A + D ++I+G+ Sbjct: 8 LPEIHNKLHQKEISVSDLVGHALETIDAQEDKIRAYITVDEEQARASARQLDDQLISGEE 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L G+P+GIKD T+G+ T S L F P Y++TV KL V LGK+NMDEF Sbjct: 68 RGLLFGLPVGIKDNIVTEGLRTTCGSQFLKNFDPVYDATVVGKLRAAQTVTLGKMNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG SNE S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 128 AMGGSNENSSFFPARNPWDL-----ERVPGGSSGGSAAAVAAGEAYFTLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYG SR G+++FA SLDQ G IT+ V+DSA +L+AIAGYD+ D+T Sbjct: 183 ASYCGVVGLKPTYGLVSRFGLVAFASSLDQIGPITKNVQDSAYVLQAIAGYDQKDSTSAK 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + +PDY AL ++G+ + +PKEY + + P + + + L+ GA E+SLPHT Sbjct: 243 VDIPDYLNALTGDVKGLRIAVPKEYLGEGVDPQVKEKVLDALKTLEGLGAVWEEVSLPHT 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIG 366 +YA+ YY+++ +EASSNLAR+DGVRYG+R + D +L++Y +R+ GFG EVK RIM+G Sbjct: 303 EYAVATYYLLASSEASSNLARFDGVRYGVRADNPDNLLDLYHQSRTQGFGPEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LSS YD++YL+A+K+RTLIK+DF FEQ DVI+ PT PT+AF +G + ++ +M Sbjct: 363 TYALSSGYYDAYYLKAQKVRTLIKQDFDRVFEQ-YDVIIGPTAPTTAFKIGSQVDDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ V++AG+PAIS+P L + MP+GLQ+IG+ F E ++ V E+ + Sbjct: 422 --YLNDILTIPVSLAGVPAISIPCGLAD-GMPVGLQIIGKAFDESSVLRVAHAFEQNTEF 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|205372469|ref|ZP_03225282.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus coahuilensis m4-4] Length = 486 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 220/481 (45%), Positives = 323/481 (67%), Gaps = 10/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E D L K++S +LV+ + IE + ++ A++ + + ARA A++ D ++ + Sbjct: 7 SLTELHDLLHKKEVSVTDLVNESYKRIEEVDGKVQAFLTLDEENARAKAKKLDDKLTTDE 66 Query: 68 ARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TKG+ T S IL+ F P Y++TV KL ++ +GKLNMDE Sbjct: 67 EKGLLFGMPIGIKDNIVTKGLRTTCSSKILENFDPIYDATVIHKLQQADSITIGKLNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+A+VA S+G+DTGGSIRQ Sbjct: 127 FAMGSSTENSAFQKTKNPWNL-----ETVPGGSSGGSAASVAAGEVPFSLGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+FTGTVG+KPTYGR SR G+++F SLDQ G ITRTV D+A LL+AIAG D D+T Sbjct: 182 PAAFTGTVGLKPTYGRVSRFGLVAFGSSLDQIGPITRTVEDNAYLLQAIAGVDLNDSTSA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ VP+Y AL +I+G+ +G+PKEY + + + + L+ GA E+SLPH Sbjct: 242 NVEVPNYAAALTGNIKGLKIGVPKEYLGEGVGEEARASVMASLKVLESLGATWEEVSLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMI 365 ++Y + YY++S +EAS+NLAR+DGVRYG R + +++L++Y+NTR+ GFG EVK RIM+ Sbjct: 302 SKYGVATYYLLSSSEASANLARFDGVRYGYRSAKAENLLDLYKNTRAEGFGDEVKRRIML 361 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LSS YD++Y +A++ RTLIK+DF + FE+ DVI+ PTTPT AF +G++ ++ + Sbjct: 362 GTFALSSGFYDAYYKKAQQARTLIKKDFEDVFEK-YDVIIGPTTPTPAFKIGEKIDDPLT 420 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ T+ VN+AG+P IS+P + +PLGLQ+IG+ F E T++ V E+ Sbjct: 421 M--YANDILTIPVNLAGVPGISIPCGFSAEGLPLGLQIIGKHFDESTIYRVAHAFEQATD 478 Query: 486 Y 486 + Sbjct: 479 F 479 >gi|152995959|ref|YP_001340794.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Marinomonas sp. MWYL1] gi|189045252|sp|A6VWN0|GATA_MARMS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|150836883|gb|ABR70859.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinomonas sp. MWYL1] Length = 486 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/487 (46%), Positives = 321/487 (65%), Gaps = 17/487 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++S +LR+KDIS+VEL ++ I + Q+N++I V Q A A +D + +G Sbjct: 5 SISTLAQKLRNKDISSVELTRLFLARIAKLDPQLNSFITVSEQHALEQAAAADVLLQSGK 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ KD F T+G T S +L F P YESTVT ++ GAVMLGK NMDEF Sbjct: 65 GTSLTGIPVAHKDLFCTEGTLTTCGSKMLHNFVPPYESTVTSRIQQAGAVMLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S+YG V +PW ++D PGGSSGGS+AA+A L A+ GTDTGGSIRQP Sbjct: 125 AMGSSNENSFYGAVKNPW-NLD----MVPGGSSGGSAAAIAAGLAVAATGTDTGGSIRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G G+KPTYGR SR G+I++A SLDQ G + ++ D A L++A+AG+DE D+T + Sbjct: 180 ASFCGITGLKPTYGRVSRFGMIAYASSLDQGGPMAKSAEDCAHLMQAMAGFDEKDSTSAD 239 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P DY L+ + G+ +G+PKEY + L + + + GA + EISLP+ Sbjct: 240 KPADDYLANLNSPLTGLKIGLPKEYFGEGLDSKVADVIMAAVKEFEKLGATVKEISLPNL 299 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 Q ++P+YY+I+P+EASSNL+R+DGVR+G R + KD+L+MY +R+ GFG EV+ RIM+G Sbjct: 300 QLSIPSYYVIAPSEASSNLSRFDGVRFGHRCDDPKDLLDMYTRSRAEGFGTEVQKRIMVG 359 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS YD++YL+A+KIR LIK DF +A E+ VDVI+ P PT+AF LG + ++ +M Sbjct: 360 TYALSEGYYDAYYLKAQKIRRLIKEDFVKALEE-VDVIMGPVAPTTAFGLGSKTSDPVAM 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D++T++VN+AG+PA+SVPA + MP+GLQ++G F E L ++ A Sbjct: 419 --YLEDIYTLSVNLAGIPAMSVPAGFAD-GMPVGLQVMGNYFAEAKLLNI-------AHQ 468 Query: 487 FRPHKWW 493 ++ H W Sbjct: 469 YQQHTDW 475 >gi|20454923|sp|Q93LE2|GATA_BACST RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|14906498|gb|AAK72612.1| glutamyl-tRNAGln amidotransferase subunit A [Geobacillus stearothermophilus] Length = 485 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/483 (47%), Positives = 322/483 (66%), Gaps = 11/483 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE L+ K++S +LVD + I ++ A++ + ++ARA A+E D ++ G+ Sbjct: 7 SVSELHTLLQKKEVSISDLVDESYRRIGEVEEKVQAFLTLNEEQARAKAKELDDQLAKGE 66 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TKG+ T IL F P Y++TV ++L GA+ +GKLNMDE Sbjct: 67 ETNPLFGLPIGIKDNIVTKGLRTTCAIKILYNFDPIYDATVMERLNAAGAITIGKLNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW K PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 127 FAMGSSTENSGFQLTRNPWDL-----KRVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AIAG D D+T Sbjct: 182 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAIAGVDPMDSTSA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+PVP+Y AL I+G+ + +P EY + + + ++ ++ L+ GA E+SLPH Sbjct: 242 NVPVPNYVEALTGDIKGLKIAVPNEYLGEGVDEGVRQSVLAALAVLEKLGATWEEVSLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+ Sbjct: 302 SKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKLTRSEGFGAEVKRRIML 361 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LSS YD++Y +A+K+RTLIKRDF FE+ DVI+ PTTPT AF +G E S Sbjct: 362 GTFALSSGYYDAYYKKAQKVRTLIKRDFENVFER-YDVIIGPTTPTPAFKIG--EKTSDP 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + ND+ T+ VN+AG+PAISVP + +P+GLQ+IG+ F E T++ V E+ Sbjct: 419 LTMYANDILTIPVNLAGVPAISVPCGFVD-GLPVGLQIIGKHFDESTVYRVAHAFEQATD 477 Query: 486 YFR 488 Y + Sbjct: 478 YHK 480 >gi|220907942|ref|YP_002483253.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. PCC 7425] gi|254790390|sp|B8HY89|GATA_CYAP4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219864553|gb|ACL44892.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cyanothece sp. PCC 7425] Length = 482 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/485 (47%), Positives = 321/485 (66%), Gaps = 10/485 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING- 66 ++ E +L SK+ SA E+ ++ I+ +++A++ + A++A A AE D++I G Sbjct: 3 SIRELHQQLVSKERSAKEITQDALEKIQQLEPKVHAFLTLTAEQALAQAERVDQQIATGT 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPI IKD TKGI T S IL GF P YESTVT +L GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIAIKDNLCTKGIPTTCGSKILQGFIPPYESTVTSRLAAAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQLTANPWDL-----QRVPGGSSGGSAAAVAAGETLIALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G V D+A+LL AIAG+D D+T + Sbjct: 178 PASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFATNVEDAALLLGAIAGHDPQDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+P+PDY + L ++G +GI +E + L P +++ + I L++ GA++ EIS P Sbjct: 238 NVPIPDYTQFLIPDLKGKKIGIIQETYGEGLDPQVEQVTHKAIQQLEELGAEVREISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 +Y LP YYII+P+EAS+NLARYDGV+YG R + +++L MY TR+ GFG EVK RIMI Sbjct: 298 FRYGLPTYYIIAPSEASANLARYDGVKYGFRSPDPENLLSMYTRTRAEGFGPEVKRRIMI 357 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++YL+A+K+RTLIK+DF AFEQ VDV++ PT PT+AF G + + S Sbjct: 358 GTYALSAGYYDAYYLKAQKVRTLIKQDFEAAFEQ-VDVLVCPTAPTTAFAAGAKTADPLS 416 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D+ T+ VN+AGLP +S+P ++ +P+GLQLIG RE+ +F V E+ Sbjct: 417 M--YLSDLMTIPVNLAGLPGLSLPCGFDQQGLPIGLQLIGNVLREDLVFQVAYAYEQATP 474 Query: 486 YFRPH 490 + H Sbjct: 475 WHDRH 479 >gi|70728276|ref|YP_258025.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas fluorescens Pf-5] gi|109891971|sp|Q4KIA8|GATA_PSEF5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|68342575|gb|AAY90181.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas fluorescens Pf-5] Length = 483 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/476 (47%), Positives = 314/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+VEL + + I + Q+N++I + A + A+ +D+R Sbjct: 1 MHHMTLAEIARGLADKKFSSVELTQTLLARIAQLDPQINSFISLTQDLALSQAKAADERR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG++ L G PI KD F T+GI T S +LD F+ Y++TV KL GAV LGK N Sbjct: 61 ANGESGALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVAKLAAAGAVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ TDTGGS Sbjct: 121 MDEFAMGSANESSWYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPAATATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FT G+KPTYGR SR G+I++A SLDQ G + RT D AILL+ +AG+D D+ Sbjct: 176 IRQPAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDPNDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY L S+QG+ +G+PKEY L P I + I L+ GA I EIS Sbjct: 236 TSIDEPVPDYSAGLTGSLQGLRIGVPKEYFSAGLDPRIAELIHNSIKELEKLGAVIKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E + LE +Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPENLEDLYKRSRGEGFGSEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR L+K DF AF + VD+IL PTTP A+ LG + + Sbjct: 356 IMVGAYALSAGYYDAYYLKAQKIRRLVKNDFMTAFNE-VDIILGPTTPNPAWKLGAK--S 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 413 SDPVAAYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|116618674|ref|YP_819045.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097521|gb|ABJ62672.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 488 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/479 (46%), Positives = 318/479 (66%), Gaps = 12/479 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++L +K++SAV+L + + I ++ ++NA+I +A A A++ D++ + + L Sbjct: 14 HNQLVNKEVSAVDLTRASLDNISKTDDKLNAFISTNPDEAIAQAQKIDEK--SDFSNVLT 71 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+G+KD ATKGI T SHIL+GF+P Y +TV +KL + GAV +GK NMDEFAMG S Sbjct: 72 GLPLGLKDNMATKGIQTTGASHILEGFKPIYNATVVEKLQNLGAVSVGKTNMDEFAMGGS 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSYY + W PGGSSGGS+AAVA ++G+DTGGSIRQPA+F G Sbjct: 132 TETSYYKQTSNAWDHSK-----VPGGSSGGSAAAVAAGQVPFALGSDTGGSIRQPAAFNG 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ + A SLDQ G TRTV+D+A +L AIAG+DE D+T VPD Sbjct: 187 IVGLKPTYGRVSRWGLFAMASSLDQIGPFTRTVKDNATVLNAIAGFDEKDSTSSQREVPD 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L ++G+ + +PKEY + + P + K + I+ L+ GA + E+SLPHT+Y + Sbjct: 247 FTAKLSGDVKGLKIAVPKEYFGEGIDPKVAKQVKAAIAQLEALGATVDEVSLPHTKYGVA 306 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII +EASSNL RYDGVRYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS Sbjct: 307 AYYIIMSSEASSNLQRYDGVRYGFRADDVKNLEDLYVKTRSEGFGDEVKRRIMLGTFSLS 366 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A KIRTL+ DF + FE DVI+ PT PT+A+ LG+E ++ +M Sbjct: 367 AGAYDAFFKKAAKIRTLLIEDFNKVFEN-YDVIVGPTAPTAAYGLGEEVDDPTAM--YLA 423 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 DV T+ VN+AGLP +SV A + +P+GLQ+IG+PF E+T++ G E+ + F H Sbjct: 424 DVLTIPVNLAGLPGLSVNAGFVD-GLPVGLQIIGKPFDEQTVYQTGYAYEQASRLFEQH 481 >gi|332974319|gb|EGK11251.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Desmospora sp. 8437] Length = 485 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 218/474 (45%), Positives = 327/474 (68%), Gaps = 11/474 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + L S +++A +L+D+ +Q I ++ + A+++V AR A+ D+R +G+ Sbjct: 8 LKEIHNGLESGELTASDLLDASLQRIRETDGTLRAFLQVDEAGARRRAQALDQR--SGNR 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+GIKD +T+G+ T A S IL+G+ P Y++TV +L GA ++GK+NMDEF Sbjct: 66 GPLAGIPMGIKDNISTEGVATTAGSKILEGYTPLYQATVMDRLEGAGANLVGKMNMDEFG 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S + +PW + PGGSSGGS+AAVA + ++G+DTGGSIRQPA Sbjct: 126 MGSSNENSGFYETRNPW-----DPERVPGGSSGGSAAAVAAGQVSFALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG+KPTYGR SR G+I+FA SLDQ G +T TV D+A +L+ +AG+D D+T ++ Sbjct: 181 AFCGVVGLKPTYGRVSRFGLIAFASSLDQIGPLTGTVEDAAYVLQVMAGHDPLDSTSADV 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY AL ++G+ V +P+E D ++P + + + L+ GA + E+SLPH + Sbjct: 241 EVPDYLSALTGDVKGLKVAVPRELMGDGIAPGVKDRVNRALKVLEGLGAVVEEVSLPHLE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 YA+ AYY+++PAEASSNLARYDGVR+G RV G+++++M+ TRS GFG+EVK RIM+GTY Sbjct: 301 YAVAAYYLLAPAEASSNLARYDGVRFGQRVAGENLIDMFSRTRSAGFGEEVKRRIMLGTY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS YD++Y +A+++RTLI+RDF F++ DV++ P+ PT+AF LG++ + +M Sbjct: 361 ALSSGYYDAYYKKAQQVRTLIRRDFENIFDR-YDVVVGPSAPTTAFKLGEKTEDPLTM-- 417 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ V++AGLPA+SVP L + +P+GLQ++G+PF E + V E+ Sbjct: 418 YLNDICTIPVSLAGLPAVSVPCGLSD-GLPVGLQIVGRPFAEARVLQVAHAYEQ 470 >gi|16077736|ref|NP_388550.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. subtilis str. 168] gi|221308505|ref|ZP_03590352.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. subtilis str. 168] gi|221312828|ref|ZP_03594633.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317752|ref|ZP_03599046.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. subtilis str. JH642] gi|221322031|ref|ZP_03603325.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. subtilis str. SMY] gi|321314397|ref|YP_004206684.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis BSn5] gi|6225411|sp|O06491|GATA_BACSU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2632982|emb|CAB12488.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Bacillus subtilis subsp. subtilis str. 168] gi|320020671|gb|ADV95657.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis BSn5] Length = 485 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/485 (46%), Positives = 325/485 (67%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+I +LVD + I+ + ++ A++ + ++ARA A+E D+ + D Sbjct: 8 ITELKQLIHKKEIKISDLVDESYKRIQAVDDKVQAFLALDEERARAYAKELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV Q+L D AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKLTKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+G+ + +PKEY + + ++ + L+ GA E+SL Sbjct: 240 SANVDVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEARESVLAALKVLEGLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TR+ GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRAEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G EN Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--ENTK 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP L + +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGLAD-GLPLGLQIIGKHFDESTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|253577658|ref|ZP_04854966.1| glutamyl-tRNA(Gln) amidotransferase [Paenibacillus sp. oral taxon 786 str. D14] gi|251842950|gb|EES70990.1| glutamyl-tRNA(Gln) amidotransferase [Paenibacillus sp. oral taxon 786 str. D14] Length = 484 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/477 (47%), Positives = 320/477 (67%), Gaps = 12/477 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E +RL +K++S ELV I + ++ AY+ + + ARA A D ++ G Sbjct: 6 LRLQEIHNRLHNKELSVAELVSEAFARIREYDGKIGAYLTLNEEGARAEAARLDAKLAQG 65 Query: 67 DARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +A L G+P+GIKD T+G+ T S L + P Y++TV KL + AV +GKLNMD Sbjct: 66 EACGLLFGLPVGIKDNMVTEGLLTTCGSQFLKNYDPIYDATVVTKLKEAEAVTIGKLNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG SNE S + PV +PW PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 126 EFAMGGSNENSSFHPVRNPWDL-----SRVPGGSSGGSAAAVAAGEAFFTLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS+ G VG+KPTYGR SR G+++FA SLDQ G IT+ V D+A +L+AIAG+D D+T Sbjct: 181 QPASYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITKNVEDAAYVLQAIAGHDPKDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ VPDY AL I G+ + +PKEY LD + P + + L+ GA E+SLP Sbjct: 241 ADVEVPDYLSALTGDITGLRIAVPKEY-LDGVDPQVKTAIMDALRVLEGLGAVWEEVSLP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIM 364 HT+YA+ AYY+++ +EASSNL+R+DGVRYG+R + ++L++Y ++RS GFG EVK RIM Sbjct: 300 HTEYAVAAYYLLASSEASSNLSRFDGVRYGVRADNAGNLLDLYYDSRSQGFGPEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LSS YD++YL+A+K+RTLIK+DF + F++ DVIL PT PT+AFPLG + ++ Sbjct: 360 LGTYALSSGYYDAYYLKAQKVRTLIKQDFDQTFDK-YDVILGPTAPTTAFPLGSQVDDPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +M ND+ T+ V++AG+PAISVP E +P+GLQ+IG+PF E T+ V E Sbjct: 419 TM--YLNDILTIPVSLAGVPAISVPCGFAE-GLPVGLQIIGKPFDESTVLRVAHAFE 472 >gi|81429160|ref|YP_396161.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus sakei subsp. sakei 23K] gi|109891953|sp|Q38VC9|GATA_LACSS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78610803|emb|CAI55854.1| Glutamyl-tRNA amidotransferase, subunit A [Lactobacillus sakei subsp. sakei 23K] Length = 488 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/471 (47%), Positives = 319/471 (67%), Gaps = 11/471 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D+L + D++A +LV ++ I+ Q++A++ + + A+ AA + D + I+ D L Sbjct: 12 HDKLVAGDLTASQLVTDTLETIKTKEQQVDAFLTIDEKGAQEAAAKIDAQPIDADNL-LA 70 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PIGIKD T G+ T A S +L F+P +++TV +KL A+M+GK N+DEFAMGSS Sbjct: 71 GMPIGIKDNLLTDGVTTTAASKMLANFKPVFDATVVEKLKAKKAIMIGKTNLDEFAMGSS 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETS + +PW DK PGGSSGGS+AAVA A++GTDTGGSIRQPA+F G Sbjct: 131 TETSAFKKTKNPW----DLDK-VPGGSSGGSAAAVAAGEVVAALGTDTGGSIRQPAAFNG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VGIKPTYGR SR G I+FA SLDQ G+ +RTV D+A +L+AI+G+DE D+T + VPD Sbjct: 186 IVGIKPTYGRVSRWGAIAFASSLDQVGVFSRTVADNATVLQAISGHDEKDSTSADYEVPD 245 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + AL+ I+GM + + KEY + + P + + I K GA + E+SLPH+QYA+ Sbjct: 246 FRAALNGDIKGMKIAVAKEYMAEGVEPAVKAQIETAIETFKSLGATVEEVSLPHSQYAVQ 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYII+ +EASSNL+R+DG+RYG R E K + ++Y +RS GFG EVK RIM+GT+ LS Sbjct: 306 TYYIIASSEASSNLSRFDGIRYGYRSPEAKTLEDVYVKSRSEGFGDEVKRRIMLGTFALS 365 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD+++ +A ++RTLI +DF + FE D+++ PTTPT+AF LG + + +M N Sbjct: 366 SGFYDAYFKKAGQMRTLIIQDFEKVFED-YDLVVGPTTPTTAFKLGDKGTDPVTM--YMN 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ T+ NMAGLPA+SVPA L + MP+GLQ+IG+ F EE+++ G E+ Sbjct: 423 DILTIPANMAGLPAMSVPAGLVD-GMPVGLQIIGKAFDEESVYRAGYAFEQ 472 >gi|167038087|ref|YP_001665665.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116494|ref|YP_004186653.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|229464483|sp|B0KBN4|GATA_THEP3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166856921|gb|ABY95329.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929585|gb|ADV80270.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 488 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/482 (46%), Positives = 327/482 (67%), Gaps = 12/482 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A I + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALITITEDFALQRAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I NG+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + G ++LGK Sbjct: 62 IKNGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK--DILEMYENTRSIGFGQEVK 360 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG + GK D+++MY TRS GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYG-HIAGKYEDLIDMYMVTRSEGFGKEVK 355 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ Sbjct: 356 RRIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIIGPTSPTVAFKIGERA 414 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+ +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V Sbjct: 415 NDPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAF 471 Query: 481 EK 482 E+ Sbjct: 472 EQ 473 >gi|289577828|ref|YP_003476455.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Thermoanaerobacter italicus Ab9] gi|289527541|gb|ADD01893.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter italicus Ab9] Length = 488 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/481 (46%), Positives = 326/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A I + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALITITEDFALQKAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + GAV+LGK Sbjct: 62 IKKGEYTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGAVILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG E +D+++MY TRS GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAEKYEDLIDMYMVTRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIIGPTSPTVAFKIGERTN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAFE 472 Query: 482 K 482 + Sbjct: 473 Q 473 >gi|218248251|ref|YP_002373622.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. PCC 8801] gi|226709592|sp|B7K0I2|GATA_CYAP8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|218168729|gb|ACK67466.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cyanothece sp. PCC 8801] Length = 482 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/482 (48%), Positives = 320/482 (66%), Gaps = 9/482 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +K+ SAVE+ ++ I Q+ +++ + A +A A+ D++I + Sbjct: 3 SIRELHQQLINKERSAVEITTEALERIAAIEPQVKSFLCITADRALETAKAVDQKIAAKE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD +TKGI T S IL+ F P YESTVTQKL + GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNMSTKGIPTTCGSRILENFIPPYESTVTQKLQEIGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW + PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYQVTANPWDL-----ERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYG SR G++++ SLDQ G RTV D AI+L AIAGYD D+T + Sbjct: 178 PASLCGVVGLKPTYGLVSRFGLVAYGSSLDQIGPFGRTVEDVAIVLGAIAGYDAKDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP+PDY L+ S++G+ +GI +E + L + +T + I L+ GA I IS P Sbjct: 238 KLPIPDYTTFLNPSLKGVKIGIIEETFGEGLDSIVAETVNKAIEQLQALGATIERISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EAS+NLARYD V+YG+R E +LEMY TR+ GFG EVK RIMIG Sbjct: 298 FRYGLPAYYIIAPSEASANLARYDAVKYGIREEAATLLEMYNKTRAKGFGSEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF +AFE VDV++ PT+PT+AF G++ ++ SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKQDFDKAFES-VDVLVCPTSPTTAFKAGEKTDDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ T+ VN+AGLP +S+P ++ +P+GLQL+ E LF+VG E+ + Sbjct: 417 --YLSDLMTIPVNLAGLPGMSIPCGFDQQGLPIGLQLVSNVLEEGKLFNVGYAYEQSTEW 474 Query: 487 FR 488 + Sbjct: 475 HK 476 >gi|168183568|ref|ZP_02618232.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum Bf] gi|237796707|ref|YP_002864259.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum Ba4 str. 657] gi|259647209|sp|C3KU97|GATA_CLOB6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|182673383|gb|EDT85344.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum Bf] gi|229263064|gb|ACQ54097.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum Ba4 str. 657] Length = 485 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 320/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDILSNKEVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILQGYTSPYDAHVTEKIKKEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGCEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L AIAG D+ Sbjct: 177 GSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + VPDY+++L + I+G +GIPKE+ + L + K+ ++ I L++ GA++ Sbjct: 237 DFTTADKEVPDYKKSLTKDIKGKKIGIPKEFFGEGLDEKVRKSVEEAIKVLEENGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRSKNFKDAQDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F+ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKD-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMID-GLPVGLQIISDYFKENVLFNLAYSY 472 Query: 481 EKEAGYFR 488 E+ +++ Sbjct: 473 EQSVDFYK 480 >gi|332981489|ref|YP_004462930.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mahella australiensis 50-1 BON] gi|332699167|gb|AEE96108.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mahella australiensis 50-1 BON] Length = 487 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/486 (48%), Positives = 318/486 (65%), Gaps = 10/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + E+ D+L+ +++SA EL S I+ IE+ + AYI + A AE+ D+ Sbjct: 2 ELYRLTAHEAYDKLKKREVSARELAQSVIERIEDVEQNIGAYIHLDFDAALRQAEDVDRH 61 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G + L G+PI IKD T+G+ T S IL F P Y++TV ++L + AV+LGK Sbjct: 62 IAEGCELPLLGGLPIAIKDNMCTEGVTTTCASRILANFVPPYDATVVRRLKERQAVILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS ETS + +PW TD+ PGGSSGGS+AAVA ++G+DTG Sbjct: 122 LNMDEFAMGSSTETSAFKKTKNPW----DTDR-VPGGSSGGSAAAVAADEAFFTLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS G VG+KPTYG SR G+++FA SLDQ G +T+ V+D A++L AI G+D Sbjct: 177 GSIRQPASLCGVVGMKPTYGAVSRYGLVAFASSLDQIGPLTKDVKDCAMVLNAIVGHDPY 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT V+ DY AL ++G+ +G+PKE+ ++ + + I K+ GA E Sbjct: 237 DATSVSRSYSDYTSALVDDVKGIKIGVPKEFFGQGINEEVKSAVIKAIELFKEMGADYEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 SLP+T +AL AYY+I+ AEASSNL RYDGV+YG R + D+++MY+ TRS GFG EVK Sbjct: 297 TSLPYTDHALSAYYLIASAEASSNLGRYDGVKYGYRAAQYDDMIDMYKKTRSEGFGSEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++YL+A K+RTLI RDF AFE+ DV++ PT+PT+AF +G+ Sbjct: 357 RRIMLGTYALSSGYYDAYYLKALKVRTLITRDFQRAFEK-YDVLVVPTSPTTAFKIGERM 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +N M +DV TV VN+AGLPAIS+P L + +P+GLQ+IG+ F EET+ V Sbjct: 416 DNPMEM--YLSDVCTVPVNIAGLPAISIPCGLDSRGLPIGLQIIGKAFDEETILRVAYAF 473 Query: 481 EKEAGY 486 E Y Sbjct: 474 ESNTPY 479 >gi|332711692|ref|ZP_08431623.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lyngbya majuscula 3L] gi|332349670|gb|EGJ29279.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lyngbya majuscula 3L] Length = 489 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/479 (48%), Positives = 312/479 (65%), Gaps = 13/479 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E +L +K+ SAVE+ + I+ Q+ +++ + + A A + D +I G+ Sbjct: 4 VRELHQQLINKERSAVEITQEALDKIQALEPQVQSFLHITSDYALEQASQVDAKIAAGEE 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPIGIKD T+GI T S IL F P YESTVTQKL D GAVM+GK N+DEF Sbjct: 64 LGTLAGIPIGIKDNMCTQGIPTTCGSRILAKFVPPYESTVTQKLKDAGAVMVGKTNLDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW PGGSSGGS+AAVA C ++G+DTGGSIRQP Sbjct: 124 AMGSSTENSAFQLTKNPWNL-----SHVPGGSSGGSAAAVASGECPIALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYG SR G+++FA SLDQ G RTV D+AILL AIAGYD DAT + Sbjct: 179 ASYCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFARTVEDAAILLNAIAGYDPNDATSLK 238 Query: 248 LPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + +PDY + L ++ + +GI E + L P ++K + I LKD GA+I EIS Sbjct: 239 VDIPDYTQFLQPDLKSNGKVKIGIITETFGEGLDPVVEKAVTKAIDQLKDLGAEIQEISC 298 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 +Y LP YYII+P+EAS+NLARYDGV+YGLR D +L MY TR+ GFG EVK RI Sbjct: 299 ARFRYGLPCYYIIAPSEASANLARYDGVKYGLRASDADNLLSMYTKTRAEGFGAEVKRRI 358 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTY LS+ YD++YL+A+K+RTLIK+DF AF++ VDV++ PT P++AF G++ + Sbjct: 359 MLGTYALSAGYYDAYYLKAQKVRTLIKQDFEAAFDK-VDVLVCPTAPSTAFKAGEKTEDP 417 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D+ T+ VN+AGLP +S+P E+ +P+G+QLI RE+ LF VG E+ Sbjct: 418 LSM--YLTDLMTIPVNLAGLPGMSIPCGFDEQGLPIGMQLISNVLREDQLFQVGYAYEQ 474 >gi|297544113|ref|YP_003676415.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841888|gb|ADH60404.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 488 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/481 (46%), Positives = 326/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A I + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALITITEDFALQKAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + GAV+LGK Sbjct: 62 IKKGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGAVILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG E +D+++MY TRS GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAEKYEDLIDMYMVTRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIVGPTSPTVAFKIGERAN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAFE 472 Query: 482 K 482 + Sbjct: 473 Q 473 >gi|308070711|ref|YP_003872316.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Paenibacillus polymyxa E681] gi|305859990|gb|ADM71778.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Paenibacillus polymyxa E681] Length = 485 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 322/482 (66%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E ++L K+IS +LV ++ I ++ AYI V ++ARA+A + D ++I+G+ Sbjct: 8 LPEIHNKLHQKEISVSDLVGHALETIGAREDKIRAYITVDEEQARASARQLDDQLISGEE 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L G+P+GIKD T+G+ T S L F P Y++TV KL V LGK+NMDEF Sbjct: 68 RGLLFGLPVGIKDNIVTEGLRTTCGSQFLKNFDPVYDATVVSKLRAAQTVTLGKMNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG SNE S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 128 AMGGSNENSSFFPARNPWDL-----ERVPGGSSGGSAAAVAAGEAYFTLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYG SR G+++FA SLDQ G IT+ V+DSA +L+AIAGYD+ D+T Sbjct: 183 ASYCGVVGLKPTYGLVSRFGLVAFASSLDQIGPITKNVQDSAYVLQAIAGYDQKDSTSAK 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + +PDY AL ++G+ + +PKEY + + P + + + L+ GA E+SLPHT Sbjct: 243 VDIPDYLNALTGDVKGLRIAVPKEYLGEGVDPQVKEKVLNALKTLEGLGAVWEEVSLPHT 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIG 366 +YA+ YY+++ +EASSNLAR+DGVRYG+R + D +L++Y +R+ GFG EVK RIM+G Sbjct: 303 EYAVATYYLLASSEASSNLARFDGVRYGVRSDNPDNLLDLYHQSRTQGFGPEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LSS YD++YL+A+K+RTLIK+DF FEQ DVI+ PT PT+AF +G + ++ +M Sbjct: 363 TYALSSGYYDAYYLKAQKVRTLIKQDFDRVFEQ-YDVIIGPTAPTTAFKIGSQVDDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ V++AG+PAIS+P L + MP+GLQ+IG+ F E ++ V E+ + Sbjct: 422 --YLNDILTIPVSLAGVPAISIPCGLAD-GMPVGLQIIGKAFDESSVLRVAHAFEQNTEF 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|254479712|ref|ZP_05093003.1| Amidase, putative [Carboxydibrachium pacificum DSM 12653] gi|214034351|gb|EEB75134.1| Amidase, putative [Carboxydibrachium pacificum DSM 12653] Length = 488 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/481 (47%), Positives = 325/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + V E ++ L +++SA E+ SY++ I+ +++A + + + A A+ +D+ Sbjct: 2 ELYSLTVHELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEM 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+A+DL GIP+ IKD +T+GI T S +L+ + P Y +TV ++L + G V+LGK Sbjct: 62 IKKGEAKDLTGIPVIIKDNISTEGIRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AAVA A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAVAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L AIAG+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNAIAGHDPMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V + PDY L + I+G+ +G+ KE+ + + +T ++ I +D GA+I++I Sbjct: 237 STSVKIEKPDYTSYLKEDIKGLRIGVAKEFFGAGIEEGVKETVKKAIKVFEDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG + +D+++MY +RS GFG+EVK Sbjct: 297 SVPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAKNYEDLVDMYMTSRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFERAFEK-CDVIVGPTSPTVAFKIGERTN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLPAIS+P L E +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPAISIPCGLSE-GLPVGLQIIGKHFDEGRILNVAYAFE 472 Query: 482 K 482 K Sbjct: 473 K 473 >gi|170758573|ref|YP_001788583.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum A3 str. Loch Maree] gi|229485874|sp|B1L1G9|GATA_CLOBM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169405562|gb|ACA53973.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum A3 str. Loch Maree] Length = 485 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 321/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDILSNKEVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILQGYTSPYDAHVTEKIKKEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AV+G S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVSGCEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L AIAG D+ Sbjct: 177 GSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + VPDY+++L + I+G +GIPKE+ + L + K+ ++ I L++ GA++ Sbjct: 237 DFTTADKEVPDYKKSLTKDIKGKKIGIPKEFFGEGLDEKVRKSVEEAIKVLEENGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRSKNFKDAKDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F+ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKD-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMID-GLPVGLQIISDYFKEDVLFNLAYSY 472 Query: 481 EKEAGYFR 488 E+ +++ Sbjct: 473 EQSVDFYK 480 >gi|149378476|ref|ZP_01896162.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Marinobacter algicola DG893] gi|149357240|gb|EDM45776.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Marinobacter algicola DG893] Length = 485 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 218/476 (45%), Positives = 317/476 (66%), Gaps = 6/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+E L S IS+VEL ++ ++ + Q+N++I + ++A A A +D++ G Sbjct: 5 SVAELSRELESGKISSVELTRQFLGRLKKEDEQLNSFITITEEQALADAHAADEQRAAGK 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A G+P KD F T G+ T S +L F P Y++TVT+ GAV LGK NMDEF Sbjct: 65 ATLWTGVPFAHKDIFCTNGVSTTCGSKMLANFVPPYDATVTENFRKAGAVCLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E+SY+G +PW + +K PGGSSGGS+AAVA L A+ TDTGGSIRQP Sbjct: 125 AMGSSTESSYFGATTNPW-GLSQGEKRVPGGSSGGSAAAVAARLVPAATATDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G+KPTYGR SR G+I+FA SLDQ G + RT D+A++L +AG+D D+T ++ Sbjct: 184 AALCGVTGLKPTYGRVSRYGMIAFASSLDQGGTMARTAEDNALMLNVMAGFDPKDSTSID 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPDY L + ++G+ +G+PKEY LS +++ + I + GA + E+SLPH Sbjct: 244 RDVPDYTATLTEPLKGLRIGLPKEYFTGNLSAAMEEQVRGAIREYEKLGATVKEVSLPHA 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 A+ AYY+I+PAEAS+NL+R+DG RYG R E KD+L+MY TR+ GFG EVK RI++G Sbjct: 304 DLAIAAYYVIAPAEASANLSRFDGARYGYRCEDPKDLLDMYTRTRAEGFGTEVKRRILVG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ +D++YL+A+K+R LI++DF AF++ VDV+++PTTP+ AF G++ ++ +M Sbjct: 364 TYALSAGYFDAYYLKAQKVRRLIQQDFINAFKE-VDVLMSPTTPSPAFIQGEKTSDPVTM 422 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DVFT+A+N+AG+PA+SVPA + +P+GLQ+IG F E L + ++ Sbjct: 423 --YLEDVFTIAINLAGIPAMSVPAGFVD-GLPVGLQIIGDYFSEARLLNAAHQFQQ 475 >gi|320529043|ref|ZP_08030135.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Selenomonas artemidis F0399] gi|320138673|gb|EFW30563.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Selenomonas artemidis F0399] Length = 475 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/472 (47%), Positives = 307/472 (65%), Gaps = 10/472 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L ++ISA EL ++ ++ + Q+ AY+ + AR A+ D +I + L GI Sbjct: 2 LSRREISARELTENAFVRMDAAEPQVGAYLLETRETARMQADAVDAKIAAKEEIPFLAGI 61 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD TKG+ T A S IL+ F P Y++TV KL D AV+LGK NMDEFAMG S E Sbjct: 62 PGAVKDNICTKGVRTTAASKILENFVPPYDATVVTKLHDAAAVVLGKTNMDEFAMGGSTE 121 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPASF G V Sbjct: 122 NSAYRPTHNPWDTAR-----VPGGSSGGSAAAVAAGTAIWALGSDTGGSIRQPASFCGIV 176 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I++A SLDQ G +TR V D+A LL IAG+D D+T VPDY Sbjct: 177 GLKPTYGRVSRYGLIAYASSLDQIGPLTRDVTDAAYLLNIIAGHDAMDSTASKSSVPDYT 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL Q ++G+ +G+PKEY + + ++ ++ I + GA++ EISLPHT YA+ Y Sbjct: 237 KALTQDVKGLKIGLPKEYFIPGMDAEVETAVRKAIHDFESMGAEVREISLPHTDYAVSTY 296 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 Y+I+PAEA++NL RYDGV YG RV+G+D+++M TR+ FG EV+ RI+IG Y LS+ Sbjct: 297 YLIAPAEAATNLERYDGVSYGARVDGEDLVDMMTRTRTEKFGAEVRRRILIGNYALSAGY 356 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A K+RTLI+ DFT AFE VDVI+TPT PT+A+ +G+ EN + D+ Sbjct: 357 YDAYYLKALKVRTLIREDFTRAFEN-VDVIMTPTAPTTAYRIGEIEN---PLQMYLQDIS 412 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 TV VN+AGLP ISVP +P+GLQ+IG+P EET+ E+ Y Sbjct: 413 TVPVNLAGLPGISVPCGFSAAGLPIGLQIIGKPLAEETILRAAFAYEQAHDY 464 >gi|297616696|ref|YP_003701855.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Syntrophothermus lipocalidus DSM 12680] gi|297144533|gb|ADI01290.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Syntrophothermus lipocalidus DSM 12680] Length = 484 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/483 (46%), Positives = 320/483 (66%), Gaps = 13/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E +D L ++I+A ++V+S + I + A++ + + AR +A + + G Sbjct: 6 LTAHELKDMLAQREITAQDIVESCLDRIGEVEENIKAFVTLTPEAARDSARKLHE---EG 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 R L GIP G+KD T+GI T S +L+ F P Y++TV KL AV +GKLNMDE Sbjct: 63 GYRGLAGIPCGLKDNLCTRGIRTTCSSRMLENFVPPYDATVVSKLRGEKAVFMGKLNMDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAFFPTRNPWDP-----ERVPGGSSGGSAAAVAAGEVIYALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+++ IAG+D D+T + Sbjct: 178 PASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGTLTKDVTDCALVMNVIAGHDRLDSTSI 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY + L I+G +G P+EY + + + +T + + +++ GA + E SLPH Sbjct: 238 DAPVPDYTKFLVPDIKGFRIGYPREYFQEGVDDAVKETINRAMLKMEEMGAVVEETSLPH 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMI 365 T++ALPAYYII+PAEASSNLAR+DGVRYGLR V+ + +++M+ ++R++GFG EVK RIM+ Sbjct: 298 TEFALPAYYIIAPAEASSNLARFDGVRYGLRDVKAESVIDMFASSRALGFGPEVKRRIML 357 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++YL+A K+R LIK DF AF++ DV++TPT PT AF L ++ +N + Sbjct: 358 GTYALSSGYYDAYYLKALKVRRLIKEDFDWAFDK-YDVLVTPTAPTVAFKLHEKTDNVLA 416 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D+ T+ VN+AGLPA+S+P +P+GLQ+IG+P E TL V E+ G Sbjct: 417 M--YMSDIATIPVNLAGLPAMSIPCGFV-NGLPVGLQIIGRPLEEGTLLRVAYAFEQSTG 473 Query: 486 YFR 488 R Sbjct: 474 MAR 476 >gi|255022182|ref|ZP_05294184.1| Aspartyl-tRNA(Asn)/Glutamyl-tRNA(Gln) amidotransferase subunit A [Acidithiobacillus caldus ATCC 51756] gi|254968364|gb|EET25924.1| Aspartyl-tRNA(Asn)/Glutamyl-tRNA(Gln) amidotransferase subunit A [Acidithiobacillus caldus ATCC 51756] Length = 490 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 330/487 (67%), Gaps = 9/487 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ +++ R L+ K+ISAVEL ++Q I++ +SQ+ ++I + + A A+A +D++ Sbjct: 2 ELHDHGLADLRRLLQRKEISAVELTTVFLQRIQSLDSQLQSFITLNEEGALASARRADEQ 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PI KD F+T+G+ T S +L+ + P +++TV ++L G V+LGKL Sbjct: 62 RAAGSVAPLLGLPIAHKDIFSTRGLRTTCGSRMLENYVPPFDATVVERLEQAGTVVLGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNETS+YG V +PW + + PGGSSGGS+AAVA L A+ GTDTGG Sbjct: 122 NMDEFAMGSSNETSHYGAVRNPWDT-----RLVPGGSSGGSAAAVAAGLAPAATGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+F G G+KPTYGR SR G+I+FA SLDQAG + R+ D A+L+ A+AG+D D Sbjct: 177 SIRQPAAFCGITGLKPTYGRVSRYGMIAFASSLDQAGPMARSAEDCALLMDAMAGHDPRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++ L + +QG+ +G+ +E+ +D L + + I+ L+D GA+IV I Sbjct: 237 STSHPRAAGEFSAGLQRPVQGLRIGVAEEFFIDGLDTQVADLVRAAIAQLEDMGARIVPI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKH 361 LPH A+ AYY+++PAEASSNLAR+DGVRYG R D L E+Y +R GFG EV+ Sbjct: 297 HLPHNAVAVSAYYVLAPAEASSNLARFDGVRYGHRSRDVDNLQELYLQSRFEGFGAEVRR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI+IGTYVLS+ YD++YL+A+K+R+LI+ DF AF + VD+I PTTPT+AF LG + Sbjct: 357 RILIGTYVLSAGYYDAYYLKAQKVRSLIREDFRRAFAE-VDLIAGPTTPTAAFALGAKRE 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + SM D++T+AVN+AG+PA+++P + +P+G+QL+G F +E L +VG + Sbjct: 416 DPVSM--YLADIYTIAVNLAGIPALNLPCGFTREGLPVGMQLMGNYFADELLLAVGHAYQ 473 Query: 482 KEAGYFR 488 + + R Sbjct: 474 QSTSWHR 480 >gi|313672051|ref|YP_004050162.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Calditerrivibrio nitroreducens DSM 19672] gi|312938807|gb|ADR17999.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Calditerrivibrio nitroreducens DSM 19672] Length = 483 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/473 (47%), Positives = 320/473 (67%), Gaps = 11/473 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L++K IS+ E+VD Y+ I+ ++ +N++I + +A+ AE D + + GIP Sbjct: 15 LKNKKISSKEMVDFYLGRIKKYDNVINSFI-TLNPEAQKEAEAYDSGAYSD--KPFAGIP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD TKG+ T S+IL+ F P Y++TV ++L D G ++LGKLNMDEFAMGSS ET Sbjct: 72 IAVKDNMVTKGLLTTCGSNILNNFIPPYDATVIKELKDAGFIILGKLNMDEFAMGSSCET 131 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+Y ++P+ PGGSSGGS+A+VA L AS+G+DTGGSIRQPA+ VG Sbjct: 132 SFYKKTVNPYDI-----NRVPGGSSGGSAASVAARLVPASLGSDTGGSIRQPAALCNIVG 186 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KPTYGR SR G+++FA SLDQ G +T+TV D+A+LL+ I YD+ D+T N Y Sbjct: 187 FKPTYGRVSRFGLVAFASSLDQIGPMTKTVEDAALLLEVIGKYDKRDSTSFNTDSFKYTD 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 SI+G+ +G+PKEY + LSP + K + I + K GA+I++IS+PHT YA+ YY Sbjct: 247 PYRDSIKGVKIGLPKEYFGEGLSPEVAKATEDAIEFFKRNGAEIIDISMPHTDYAVSVYY 306 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 I++ AEASSNLAR+DGV+YG R +D+ +MY TRS GFG EVK RIM+GTYVLSS Y Sbjct: 307 ILATAEASSNLARFDGVKYGFRERCEDLNDMYTLTRSRGFGTEVKRRIMLGTYVLSSGYY 366 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 D++YL+A+K+RTLIK+DF EAF + VD ILTPT+PT+AF LG++ +N M +D++T Sbjct: 367 DAYYLKAQKVRTLIKKDFIEAFNK-VDFILTPTSPTTAFRLGEKASNPLEM--YLSDIYT 423 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +++N+ G +S+P +P+G+QL+G F E+ L S+ E+ Y++ Sbjct: 424 ISLNLFGGCGLSIPGGFDANGLPIGVQLLGNYFDEDRLLSLASFFERATEYYK 476 >gi|52079163|ref|YP_077954.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus licheniformis ATCC 14580] gi|52784530|ref|YP_090359.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus licheniformis ATCC 14580] gi|319647063|ref|ZP_08001289.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus sp. BT1B_CT2] gi|81609310|sp|Q65MP8|GATA_BACLD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|52002374|gb|AAU22316.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Bacillus licheniformis ATCC 14580] gi|52347032|gb|AAU39666.1| GatA [Bacillus licheniformis ATCC 14580] gi|317390887|gb|EFV71688.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus sp. BT1B_CT2] Length = 485 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/485 (47%), Positives = 322/485 (66%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE + + +K+IS +LVD + I + ++ A++++ +KARA A+E D+ + D Sbjct: 8 ISELKRLIHNKEISISDLVDESYKRIHEVDGKVQAFLQLDEEKARAYAKELDEAL---DT 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 RD L G+PIGIKD TK + T S IL+ F P Y++TV ++L + AV +GKLNM Sbjct: 65 RDEHGLLFGMPIGIKDNIVTKDLRTTCASKILENFDPIYDATVVERLHEAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S + +PW + PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSGFKKTKNPWNL-----ETVPGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITR+V D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRSVEDNAYLLQAISGVDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPDY AL I+G+ + +PKEY + +S ++ + + L+ GA E+SL Sbjct: 240 SANVDVPDYLSALTGDIKGLKIAVPKEYLGEGVSEEAKQSVLEALKVLESLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TRS GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRSEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + F DVI+ PTTPT AF +G E S Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVF-ANYDVIIGPTTPTPAFKIG--EKTS 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGFA-NGLPLGLQIIGKHFDESTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|254427357|ref|ZP_05041064.1| Amidase, putative [Alcanivorax sp. DG881] gi|196193526|gb|EDX88485.1| Amidase, putative [Alcanivorax sp. DG881] Length = 486 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 222/485 (45%), Positives = 316/485 (65%), Gaps = 16/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + L ++D S+ EL + ++ I+ + +N+++ V +A A A+ +D I G A Sbjct: 6 LTELKAGLANRDFSSRELTEHFLARIQQYDGDLNSFVTVTDVQALAQADAADAAIAAGKA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F T+G+ T S +LD F Y +TV +K+ GAVMLGK NMDEFA Sbjct: 66 GLLTGLPIAHKDIFCTEGVRTSCGSKMLDNFIAPYTATVVEKMAAEGAVMLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNETSYYGPV +PW + PGGSSGG++A + L + GTDTGGSIRQPA Sbjct: 126 MGSSNETSYYGPVKNPWDL-----ERVPGGSSGGAAACLGARLAPGATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G+KPTYGR SR G+I+FA SLDQAG + ++ D A++L+A+AG+D D+T +N Sbjct: 181 ALNNITGLKPTYGRVSRWGMIAFASSLDQAGPMAQSAEDCALMLQAMAGHDHRDSTSLNE 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 V DY AL I G+T+GIP+E+ D L I + I L+ GAK+V +SLP + Sbjct: 241 KVGDYLAALKDDISGLTIGIPEEFFPDTLDGAIADNSRDAIRELEKLGAKVVSVSLPSIK 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+I+PAEAS+NL+R+DGVR+G R + +D+ ++Y+ +RS GFG EVK RI++G Sbjct: 301 LSVPAYYVIAPAEASANLSRFDGVRFGHRCDDPQDLEDLYKRSRSEGFGDEVKRRILVGA 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++Y RA+++R LI+ DF AFE+ VDV++ PT P +AF LG ++++ SM Sbjct: 361 YALSAGYYDAYYRRAQQVRRLIRDDFARAFEK-VDVLMGPTAPETAFKLGAKKDDPVSM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 DVFT+ VN+AGLPA+S+P +P G Q+IG FRE GQI+ Y Sbjct: 419 -YMADVFTIGVNLAGLPALSMPTGFI-NGLPTGTQIIGNYFRE------GQILNVAHKYQ 470 Query: 488 RPHKW 492 + W Sbjct: 471 QATDW 475 >gi|296330127|ref|ZP_06872609.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673371|ref|YP_003865043.1| glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. spizizenii str. W23] gi|296152716|gb|EFG93583.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411615|gb|ADM36734.1| glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. spizizenii str. W23] Length = 485 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/485 (46%), Positives = 321/485 (66%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+I +LVD + I+ + ++ A++ + ++ARA A+E D+ + D Sbjct: 8 ITELKQLIHKKEIKISDLVDESYKRIQAVDDKVQAFLALDEERARAYAKELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV Q+L D AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKLTKNPWNL-----GTVPGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+GM + +PKEY + + ++ + L+ GA E+SL Sbjct: 240 SANVDVPDFLSSLTGDIKGMKIAVPKEYLGEGVGKEARESVLAALKVLEGLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TR+ GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRAEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G EN Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--ENTK 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP L + +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGLAD-GLPLGLQIIGKHFDESTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|115372435|ref|ZP_01459744.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Stigmatella aurantiaca DW4/3-1] gi|310819539|ref|YP_003951897.1| glutamyl-tRNA(gln) amidotransferase subunit a [Stigmatella aurantiaca DW4/3-1] gi|115370648|gb|EAU69574.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Stigmatella aurantiaca DW4/3-1] gi|309392611|gb|ADO70070.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Stigmatella aurantiaca DW4/3-1] Length = 486 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/490 (46%), Positives = 332/490 (67%), Gaps = 13/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++EL+ + ++ +L S +I+++E + + I + Q+ A++ + + A AAAE SD Sbjct: 3 LTELSMLELAA---KLSSGEITSLEATRACLARIAQVDGQVKAFLRLDEKGALAAAEASD 59 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A L+G+PIG+KD F T+G T S IL GF P Y++TV + L + G ++ Sbjct: 60 ARRKAGNPASPLDGVPIGLKDIFLTEGRETTCASRILQGFIPPYDATVVRLLREAGLPIV 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSS E S +GP +PW + TPGGSSGGS+AAVA ++GTD Sbjct: 120 GKLNMDEFAMGSSTEGSAFGPTHNPWDL-----ERTPGGSSGGSAAAVAACEVFGALGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYGR SR G+I++A SLDQ G +TRTV D+A LL+ +A +D Sbjct: 175 TGGSIRQPAALTNTVGLKPTYGRVSRYGVIAYASSLDQVGPMTRTVADTAALLQILARHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + PDY L+ ++G+ +G+P+EY D + P +++ ++ + + GA + Sbjct: 235 PLDSTSAKVEAPDYREDLEGGVRGLRLGVPREYFTDGMDPEVEQAVREALKAYEHMGATL 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 V++SLPHT+YAL YY+++ AEASSNLARYDG+R+GLR + K + E+Y TR GFG E Sbjct: 295 VDVSLPHTKYALATYYLLATAEASSNLARYDGIRFGLRAKDAKGLKELYGLTRERGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTY LS+ YD++YLRA+K+RTLI++DF AFEQ VD +++PT+P AF LG+ Sbjct: 355 VKRRIMLGTYALSAGYYDAYYLRAQKVRTLIRQDFASAFEQ-VDALVSPTSPVPAFKLGE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + SM D+FT+ N+AGLP +S+P + +P+GLQ++G+PF E L + + Sbjct: 414 KVADPLSM--YLMDIFTLPCNLAGLPGLSLPCGFTKSNLPIGLQILGKPFDEARLLRIAR 471 Query: 479 IIEKEAGYFR 488 E+E G+ R Sbjct: 472 AFEREHGFTR 481 >gi|254000232|ref|YP_003052295.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylovorus sp. SIP3-4] gi|253986911|gb|ACT51768.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylovorus sp. SIP3-4] Length = 487 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/471 (50%), Positives = 324/471 (68%), Gaps = 12/471 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L++K IS+ EL +++Q I+ N ++NAYI + A+++ A A+ +D RI G A+ L GIP Sbjct: 13 LQAKQISSTELTQAFLQRIDQHNPEINAYITIDAERSLAQAKAADARIAAGTAQPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F G T S +LD F Y++TV + + GAV LGK NMDEFAMGSSNET Sbjct: 73 IAQKDIFVANGWKTTCGSKMLDNFIGPYDATVIKLFDEAGAVNLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SYYG V +PW D T PGGSSGGS+AAVA LCAA+ GTDTGGSIRQPAS G G Sbjct: 133 SYYGKVQNPW---DRTR--VPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGLSG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQAG + ++ D A+++ + G+DE D+T + DYER Sbjct: 188 LKPTYGLVSRYGMIAFASSLDQAGPMAKSCEDMALMMNVMTGFDERDSTSLQRDKEDYER 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L +S+QG+ VG+PKE+ D LS + + I+ + GA+IVEISLP+TQ ++P YY Sbjct: 248 ELGKSLQGLRVGLPKEFFADGLSSEVAAVVESAIAEYRKLGAEIVEISLPNTQLSIPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+R+DGVRYG R E D+L+MY +R+ GFG EVK RI+IGTYVLS+ Sbjct: 308 VLAPAEASSNLSRFDGVRYGHRAAEYDDLLDMYCKSRAEGFGAEVKRRILIGTYVLSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A++IR LI DF +AF Q DVI+ PT P +AF G++ N+ SM D++ Sbjct: 368 YDAYYLKAQQIRRLIAEDFAKAFTQ-CDVIMGPTAPGTAFRSGEKANDPVSM--YLEDLY 424 Query: 435 TVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+AVN+AGLP +S+PA K++P+GLQ+IG F E + +VG ++ Sbjct: 425 TIAVNLAGLPGMSIPAGFASVDGKQLPVGLQVIGNYFDEARMLNVGHAYQQ 475 >gi|110833389|ref|YP_692248.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax borkumensis SK2] gi|123050697|sp|Q0VS72|GATA_ALCBS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|110646500|emb|CAL15976.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alcanivorax borkumensis SK2] Length = 491 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/490 (45%), Positives = 319/490 (65%), Gaps = 21/490 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + L + D S+ EL + ++ I+ + ++N+++ V ++A A A+ +D + A Sbjct: 6 LTELKAGLAAGDFSSRELTEHFLARIKQYDGELNSFVTVTEEQALAQADAADATLATNRA 65 Query: 69 RD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 L G+PI KD F T+G+ T S +LD F Y +TV +K+ GAVMLGK N Sbjct: 66 SSSVSGLLTGLPIAHKDIFCTEGVRTSCGSKMLDNFIAPYTATVVEKMAAEGAVMLGKTN 125 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETSYYGPV +PW + PGGSSGG++A + L A+ GTDTGGS Sbjct: 126 MDEFAMGSSNETSYYGPVKNPWDL-----ERVPGGSSGGAAACLGARLAPAATGTDTGGS 180 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G+KPTYGR SR G+I+FA SLDQAG + ++ D A++L+A+AG+D D+ Sbjct: 181 IRQPAALNNITGLKPTYGRVSRWGMIAFASSLDQAGPMAQSAEDCALMLQAMAGHDHRDS 240 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T +N V DY AL I+G+T+GIP+E+ D L I + I L+ GAK+V +S Sbjct: 241 TSLNEKVGDYLGALKDDIRGLTIGIPEEFFPDTLDGAIADNSRDAIRELEKLGAKVVSVS 300 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP + ++PAYY+I+PAEAS+NL+R+DGVR+G R + +D+ ++Y+ +RS GFG EVK R Sbjct: 301 LPSIKLSVPAYYVIAPAEASANLSRFDGVRFGHRCDDPQDLEDLYKRSRSEGFGDEVKRR 360 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++G Y LS+ YD++Y RA+++R+LI+ DF AFE+ VDV++ PT P +AF LG ++++ Sbjct: 361 ILVGAYALSAGYYDAYYRRAQQVRSLIRDDFARAFEK-VDVLMGPTAPETAFKLGAKKDD 419 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM DVFT+ VN+AGLPA+S+P +P G Q+IG FRE GQI+ Sbjct: 420 PVSM--YMADVFTIGVNLAGLPALSMPTGFI-NGLPTGTQIIGNYFRE------GQILNV 470 Query: 483 EAGYFRPHKW 492 Y + W Sbjct: 471 AHKYQQATDW 480 >gi|322807577|emb|CBZ05152.1| aspartyl-tRNA(Asn) amidotransferase subunit A [Clostridium botulinum H04402 065] Length = 485 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 320/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDILSNKEVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDGK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL+G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTSPYDAHVTEKIKQEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGSEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L IAG D+ Sbjct: 177 GSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSVIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V+ VPDY+++L + I+G +GIP E+ + L + K+ ++ I L+ GA++ Sbjct: 237 DFTTVDKEVPDYKKSLTKDIKGKRIGIPNEFFGEGLDKNVRKSVEEAIKVLEANGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRSKNFKDAQDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F+ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKD-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMVD-GLPVGLQIISDYFKEDVLFNLAYSY 472 Query: 481 EKEAGYFR 488 E+ +++ Sbjct: 473 EQSVDFYK 480 >gi|291483110|dbj|BAI84185.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus subtilis subsp. natto BEST195] Length = 485 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/485 (46%), Positives = 323/485 (66%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+I +LVD + I+ + ++ A++ + ++ARA A E D+ + D Sbjct: 8 ITELKQLIHKKEIKISDLVDESYKRIQAVDDKVQAFLALDEERARAYATELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV Q+L D AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKLTKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+G+ + +PKEY + + ++ + L+ GA E+SL Sbjct: 240 SANVDVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEARESVLAALKVLEGLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TR+ GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRAEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G EN Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--ENTK 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP L + +PLGLQ+IG F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGLAD-GLPLGLQIIGNHFDESTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|187776817|ref|ZP_02993290.1| hypothetical protein CLOSPO_00333 [Clostridium sporogenes ATCC 15579] gi|187775476|gb|EDU39278.1| hypothetical protein CLOSPO_00333 [Clostridium sporogenes ATCC 15579] Length = 485 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/488 (43%), Positives = 319/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + + + L +K++ A E+ +++ I ++ + AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHQLKGMLSNKEVKAEEITKAFLDKINLVDNNLGAYLYVSEEEAIKKAKEIDGK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILQGYTSPYDAHVTEKIKKEDGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGCEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L IAG D+ Sbjct: 177 GSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSTIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V+ VPDY+++L + I+G +GIPKE+ + L + K+ ++ I L++ GA++ Sbjct: 237 DFTTVDKEVPDYKKSLTKDIKGKKIGIPKEFFGEGLDEKVRKSVEESIKVLEENGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGYRAKNFKDAQDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F++ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKE-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DD--VMAMYLSDIYTVPISVAGVPAISLPCGMVD-GLPVGLQIISDYFKEDVLFNLAYSY 472 Query: 481 EKEAGYFR 488 E+ A + + Sbjct: 473 EQSADFHK 480 >gi|225851021|ref|YP_002731255.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Persephonella marina EX-H1] gi|254790399|sp|C0QRF9|GATA_PERMH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225646504|gb|ACO04690.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Persephonella marina EX-H1] Length = 485 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/477 (46%), Positives = 327/477 (68%), Gaps = 11/477 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ E ++ + K++ E+++S+ Q ++ ++ +Y+ + ++A A++ D++ Sbjct: 2 ELWKRSIKELKELIEKKEVKPSEVIESFAQRTKDVEVKIKSYVTDLTEQAVERAKQLDEK 61 Query: 63 IIN-GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I + + +L GIPI IKD +T+GI T S IL+ + P +++TV ++L D V+ GK Sbjct: 62 ISDLSEIPELFGIPIAIKDNISTEGIRTTCSSKILENYVPPFDATVIKRLKDKEYVITGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSS E S + +PW +D PGGSSGGS+AAV+ L A++G+DTG Sbjct: 122 TNLDEFAMGSSTENSAFFVTRNPW-DLDRV----PGGSSGGSAAAVSAGLAPAALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G +G+KPTYGR SR G+++FA SLDQ G TRTV D+AILL I+G D Sbjct: 177 GSIRQPAAFCGVIGLKPTYGRVSRYGLVAFASSLDQIGTFTRTVEDTAILLNIISGKDPK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + VPD+ + LD+ I+G+ +GIP+E+ ++ L I + + L+ GA++V Sbjct: 237 DSTSADREVPDFTKFLDKDIKGIKIGIPEEFFVEGLDSQIKELVMESAKLLEKEGAELVS 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 IS+P T+YA+ AYYII+P+EASSNLARYDGVRYG R + D+ EMY TR GFG EVK Sbjct: 297 ISMPTTKYAIEAYYIIAPSEASSNLARYDGVRYGFRASDYSDLEEMYSKTRDEGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++YL+A+K+RTLI +DF +AFE VD+ILTPTTP AF +G++ Sbjct: 357 RRIMLGTYSLSSGYYDAYYLKAQKVRTLIYQDFMKAFE-SVDIILTPTTPDVAFRIGEKV 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ M +D+FTV+VNMAG+P +S+P + +P+G+QLIG+PF E T+ V Sbjct: 416 DDPLQM--YLSDIFTVSVNMAGVPGMSIPCGF-KDGLPVGMQLIGKPFDEGTIIQVA 469 >gi|119505169|ref|ZP_01627245.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [marine gamma proteobacterium HTCC2080] gi|119459151|gb|EAW40250.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [marine gamma proteobacterium HTCC2080] Length = 492 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/486 (45%), Positives = 320/486 (65%), Gaps = 10/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + + +E L++ +ISAVEL ++ I AI N +NA + + + A A A+ +D ++ Sbjct: 6 LTYASATELSVSLKTAEISAVELTEACIDAIAAHNGTVNAVVTLCEESALAEAKAADLKL 65 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G A L GIP+ KD F T+ + T S +L F P Y++TV +L G VMLGK N Sbjct: 66 RDGSAGPLTGIPLLHKDIFCTRNVATTCASKMLANFVPPYDATVVSRLRTAGTVMLGKTN 125 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS ETS +G +PW PGGSSGG++AAVA S GTDTGGS Sbjct: 126 MDEFAMGSSTETSVFGVTRNPWDL-----NCVPGGSSGGAAAAVAAGFAPLSTGTDTGGS 180 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPAS G G+KPTYGR SRLGII+FA SLDQAG +TRTV D+A++L+A++G D D+ Sbjct: 181 IRQPASLCGITGLKPTYGRVSRLGIIAFASSLDQAGPMTRTVEDAALMLQAMSGVDAGDS 240 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T +L VPD+ L+Q I G+ +GIP+EY L + + ++ L GA++V+I Sbjct: 241 TSADLDVPDFTAGLNQPIAGLKIGIPREYFNHNLDQRVANKIHEALNELVKEGAELVDID 300 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPHT+ + YYII+PAEAS+NL+RYDGVR+G R + +++ ++YE +RS GFG+EV+ R Sbjct: 301 LPHTEQGIATYYIIAPAEASTNLSRYDGVRFGHRCDSPQNLTDLYERSRSEGFGEEVQRR 360 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ YD+++ +A+++R LI DF +AF++ DVI P P +AFPLG + ++ Sbjct: 361 ILVGTYALSAGFYDAYFKKAQQVRRLISEDFQKAFDR-CDVIAGPAAPGTAFPLGAKSDD 419 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D++T++VN+AGLP +S+PA + MP+GLQLIG+ F E TL +G + Sbjct: 420 PLAM--YLEDIYTLSVNLAGLPGLSIPAGFID-GMPVGLQLIGRSFDEATLLKMGHRFQL 476 Query: 483 EAGYFR 488 + R Sbjct: 477 CTNHHR 482 >gi|91776839|ref|YP_546595.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methylobacillus flagellatus KT] gi|122399418|sp|Q1GYD3|GATA_METFK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91710826|gb|ABE50754.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methylobacillus flagellatus KT] Length = 490 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 230/475 (48%), Positives = 320/475 (67%), Gaps = 15/475 (3%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L SK+IS+VEL Y+ I N ++NAYI V + + A A+ +D+RI NGDA L G Sbjct: 11 DMLASKEISSVELTQEYLNRIAQLNPEINAYITVNPELSLAQAQAADQRIANGDAGPLTG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPI KD F KG T S +L+ F Y++ + ++ GAV LGK NMDEFAMGSSN Sbjct: 71 IPIAQKDIFCAKGWRTTCGSRMLENFIAPYDAGIIERFNAAGAVNLGKTNMDEFAMGSSN 130 Query: 134 ETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSY+G V +PW RS PGGSSGGS+AAVA LCAA+ GTDTGGSIRQPAS G Sbjct: 131 ETSYFGKVQNPWDRSR------VPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCG 184 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPTYG SR G+I+FA SLDQAG + + D A+++ + G+DE D+T + D Sbjct: 185 LSGLKPTYGLASRYGMIAFASSLDQAGPMAHSAEDMALMMNVMTGFDERDSTSLQREKED 244 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y R L +S+ G+ +G+PKEY + L + K + + + GA+IVE++LP+T ++P Sbjct: 245 YTRELGKSLAGIRIGLPKEYFAEGLDAGVAKVIEAAVDEYRKLGAEIVEVTLPNTMLSIP 304 Query: 313 AYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+++PAEASSNL+RYDGVR+G R E D+++MY +R+ GFG+EVK RI+IGTYVLS Sbjct: 305 VYYVLAPAEASSNLSRYDGVRFGHRAAEYDDLMDMYCKSRAEGFGEEVKRRILIGTYVLS 364 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD++YL+A++IR LI DF +AFEQ D+IL PT P++AF G++ ++ SM Sbjct: 365 AGYYDAYYLKAQQIRRLIAEDFAKAFEQ-CDLILGPTAPSTAFKSGEKADDPVSM--YLQ 421 Query: 432 DVFTVAVNMAGLPAISVPAALCEK----KMPLGLQLIGQPFREETLFSVGQIIEK 482 D++T+AVN+AGLP +S+PA ++P+GLQ+IG F E + + G + ++ Sbjct: 422 DIYTIAVNLAGLPGMSIPAGFAPAADGVELPVGLQIIGNYFDEARMLNAGHVYQQ 476 >gi|315641087|ref|ZP_07896166.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus italicus DSM 15952] gi|315483095|gb|EFU73612.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus italicus DSM 15952] Length = 490 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/480 (44%), Positives = 310/480 (64%), Gaps = 11/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V E + L SK+ISAV+L + I+ + + ++A++ + +KA AE D + I+ + Sbjct: 8 SVEELHNLLVSKEISAVDLTRATFDRIKETENDVDAFLTLNEEKAVKMAEAIDLKGID-E 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPIGIKD TK + T A S IL F P Y++TV K++++ + +GKLNMDEF Sbjct: 67 GNVLAGIPIGIKDNIVTKDLVTTAASKILYNFDPIYDATVMHKVYESDLIPVGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S ETS++ + W PGGSSGGS+ AVA S+GTDTGGSIRQP Sbjct: 127 AMGGSTETSHFKKTKNAWDHSK-----VPGGSSGGSAVAVAAGQVPVSLGTDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+I+FA SLDQ G TRTV+D+A++L AI+G+D DAT Sbjct: 182 AAFNGVVGMKPTYGRVSRFGLIAFASSLDQIGPFTRTVKDNALVLNAISGFDAKDATSSG 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPD+ + + ++GM + +PKEY + ++P + +T + GA + E+SLPH+ Sbjct: 242 REVPDFTKDILAGVKGMKIALPKEYLGEGIAPEVKETILAAAETYRKLGATVEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIG 366 +Y + YYII+ +EASSNL R+DG+RYG R + LE +Y N+RS GFG+EVK RIM+G Sbjct: 302 KYGVAVYYIIASSEASSNLQRFDGIRYGYRSANVNNLEDVYVNSRSEGFGEEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD+++ +A ++RT+IK+DF + FE+ DVI+ P PT AF LG EN + Sbjct: 362 TFSLSAGYYDAYFKKAGQVRTMIKQDFDKVFEE-YDVIIGPAAPTVAFGLG--ENIDDPL 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ E+ + Sbjct: 419 AMYLADLLTIPVNLAGLPGMSIPAGFVE-GLPVGLQIIGKHFDEATMYQAAFAFEQATDF 477 >gi|262067507|ref|ZP_06027119.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fusobacterium periodonticum ATCC 33693] gi|291378770|gb|EFE86288.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fusobacterium periodonticum ATCC 33693] Length = 484 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 222/482 (46%), Positives = 324/482 (67%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S +ISA E+V+S+ + IE ++ +++ + A A++ D++ NG Sbjct: 6 LTAKELRDKFLSGEISAEEIVNSFYERIEKIEDKVKSFVSLRKDLALEEAKKLDEKRKNG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD +G + +CS IL+ + Y++TV +KL + A++LG NMD Sbjct: 66 EKLGKLAGIPLAIKDNILMEGQKSTSCSKILENYVGIYDATVVKKLKEEDAIILGVTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TSY+ +PW +D PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 126 EFAMGSTTKTSYHHKTANPW-DLDRV----PGGSSGGAAASVAAQEVPISLGSDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 181 QPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAGADDYDATV 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY L++ I+G+ VG+PKEY ++ L+P I K ++ LK+ GA+IVE+SLP Sbjct: 241 SKNEVPDYTEFLNKDIKGLKVGLPKEYFIEGLNPEIKKIVDNSVNALKELGAEIVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TR+ GFG EVK RIM Sbjct: 301 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRTEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ +D+++ +A+K+RTLIK+DF + VDVILTP P+ AF L ++ Sbjct: 361 MGTYVLSAGFFDAYFKKAQKVRTLIKQDFENVLTK-VDVILTPVAPSIAFKL----SDVK 415 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 S +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF E TL V +E + Sbjct: 416 SPIELYLEDIFTISANLAGIPAISLPGGLLD-NLPVGVQFMGRPFDEGTLIKVSSALESK 474 Query: 484 AG 485 G Sbjct: 475 IG 476 >gi|78212688|ref|YP_381467.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Synechococcus sp. CC9605] gi|109891996|sp|Q3AKH0|GATA_SYNSC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78197147|gb|ABB34912.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Synechococcus sp. CC9605] Length = 491 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/489 (46%), Positives = 317/489 (64%), Gaps = 13/489 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +S R +L+S ++S+ ELVD +++ +E+S +NA++EV A +ARA A D+ G Sbjct: 6 MTISAWRQQLQSGEVSSRELVDQHLKRLESSEPSLNAFVEVTADQARAEASRIDEARAAG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +A L G+P+ IKD TKG+ T S +L+ F P YESTVT++LW G V++GK N+D Sbjct: 66 EALGPLAGLPLAIKDNLCTKGVRTTCSSRMLEQFVPPYESTVTERLWQAGGVLVGKTNLD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +G +PW + PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 126 EFAMGGSTETSAFGATQNPWNT-----AHVPGGSSGGSAAAVAAGSCVASLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G +V D A LL+ IAG D D+TC Sbjct: 181 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGSVADVAELLQVIAGPDPRDSTC 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ VP + L QSI+G+ VG+ KE + + L P + + Q + L+ GA++VE+S Sbjct: 241 LDAAVPVFSDGLSQSIKGLKVGLIKECFDAEGLDPEVKASVQASAAQLEALGAELVEVSC 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + L M +R+ FG EV+ RI Sbjct: 301 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAEDAESLAAMTARSRAEAFGAEVQRRI 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF + VDV+LTPT P++AF G ++ Sbjct: 361 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAF-KSVDVLLTPTAPSTAFKAGAHADDP 419 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ VN+AGLPAISVP +P+G+QLIG E L V E+ Sbjct: 420 LAM--YLADLLTIPVNLAGLPAISVPCGFSAAGLPIGMQLIGNVLDEPRLLQVAHQYEQA 477 Query: 484 AGYF--RPH 490 A F RP Sbjct: 478 AQVFASRPE 486 >gi|158336663|ref|YP_001517837.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acaryochloris marina MBIC11017] gi|189045139|sp|B0C269|GATA_ACAM1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|158306904|gb|ABW28521.1| aspartyl/glutamyl-tRNA amidotransferase A subunit [Acaryochloris marina MBIC11017] Length = 482 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/480 (47%), Positives = 318/480 (66%), Gaps = 16/480 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EG 73 L +K+ SA E+ ++ ++ I ++++++ + A +A A A++ D ++ G+ L G Sbjct: 10 ELITKERSAQEITEAALETIHQLEPKLHSFLAITADQALAQAKQVDAQLAAGEEIGLLAG 69 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPIGIKD TKGI T S IL F P YESTVTQKL GAVM+GK N+DEFAMGSS Sbjct: 70 IPIGIKDNMCTKGIATTCGSKILQNFIPPYESTVTQKLAAAGAVMVGKTNLDEFAMGSST 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S Y +PW PGGSSGGS+AAVA C SIG+DTGGSIRQPA+ G Sbjct: 130 ENSAYQVTGNPWDV-----SRVPGGSSGGSAAAVAADECVVSIGSDTGGSIRQPAALCGV 184 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G++++A SLDQ G RTV D+AILL+ IAGYD D+T + + +PDY Sbjct: 185 VGLKPTYGLVSRFGLVAYASSLDQIGPFGRTVEDAAILLQEIAGYDPQDSTSLKVEIPDY 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++L ++G VG+ E + L ++K ++ I L + GA++ EIS P +Y LP Sbjct: 245 SKSLIPDLKGKKVGVITETFGEGLDEVVEKVVRKAIDQLAELGAEVQEISCPRFRYGLPT 304 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+P+EAS+NLARYDGV+YG R + D++ MY NTR+ GFG EVK RIMIGTY LS+ Sbjct: 305 YYVIAPSEASANLARYDGVKYGYRTDDPDDLMSMYTNTRAEGFGAEVKRRIMIGTYALSA 364 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++YL+A+K+RTLIK DF +AFE VDV++ PTTPT+AF G++ + SM +D Sbjct: 365 GYYDAYYLKAQKVRTLIKEDFEKAFES-VDVLVCPTTPTTAFKAGEKTADPLSM--YLSD 421 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 + T+ VN+AGLP +S+P ++ +P+GLQ+IG RE+ Q+++ Y + +W Sbjct: 422 LMTIPVNLAGLPGLSLPCGFDDQGLPIGLQMIGNVLRED------QVLQAAYAYEQSTEW 475 >gi|326795034|ref|YP_004312854.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Marinomonas mediterranea MMB-1] gi|326545798|gb|ADZ91018.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Marinomonas mediterranea MMB-1] Length = 486 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/469 (48%), Positives = 313/469 (66%), Gaps = 10/469 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +LR K++S+VEL Y++ I + Q N++I V + A A A+ +D I NG+ L GI Sbjct: 12 KLRKKELSSVELTQDYLKRINEIDPQFNSFITVTDELALAQAQAADNAIANGETSPLTGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ KD F T+G+ T S IL F P YESTVT ++ GAV LGK NMDEFAMGSSNE Sbjct: 72 PVAHKDLFCTEGVLTTCASKILHNFVPPYESTVTARIKAAGAVALGKTNMDEFAMGSSNE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G V +PW PGGSSGGS+AAVA LC A+ GTDTGGSIRQPASF G Sbjct: 132 NSYFGAVKNPWNI-----NTVPGGSSGGSAAAVAAGLCVAATGTDTGGSIRQPASFCGIT 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I++A SLDQAG + R+ D A LL++ AG+D D+T Y Sbjct: 187 GLKPTYGRVSRFGMIAYASSLDQAGPMARSAEDCAYLLQSFAGFDTNDSTSSETATEGYL 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 ++D + G+ +G+PKEY D L + + + + GA + EISLP+ ++P+Y Sbjct: 247 ASIDSPLAGLKIGLPKEYFGDGLDSDVAQVIMDAVKEFEKLGATVQEISLPNLNLSIPSY 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+P+EASSNL+R+DGVRYG R E KD+L+MY TRS GFG+EV+ RIM+GTY LS Sbjct: 307 YVIAPSEASSNLSRFDGVRYGHRCEDPKDLLDMYMRTRSEGFGKEVQKRIMVGTYALSEG 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y++A++IR LIK DF +A+++ VDVI+ P PT+AF LG++ + +M D+ Sbjct: 367 YYDAYYVKAQRIRRLIKEDFVKAYQE-VDVIMGPVAPTTAFGLGEKTTDPVAM--YLEDI 423 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +T++VN+AG+PA+SVPA MP+GLQ++G F E L +V ++ Sbjct: 424 YTLSVNLAGIPAMSVPAGF-SNGMPVGLQIMGNYFDEAKLLNVAHKFQQ 471 >gi|313202199|ref|YP_004040857.1| glutamyl-tRNA(gln) amidotransferase subunit A [Methylovorus sp. MP688] gi|312441515|gb|ADQ85621.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylovorus sp. MP688] Length = 487 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/471 (50%), Positives = 323/471 (68%), Gaps = 12/471 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L++K IS+ EL +++Q I+ N ++NAYI + A+++ A A+ +D RI G A+ L GIP Sbjct: 13 LQAKQISSTELTQAFLQRIDQHNPEINAYITIDAERSLAQAKAADARIAAGTAQPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F G T S +LD F Y++TV + + GAV LGK NMDEFAMGSSNET Sbjct: 73 IAQKDIFVANGWKTTCGSKMLDNFIGPYDATVIKLFDEAGAVNLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SYYG V +PW D T PGGSSGGS+AAVA LCAA+ GTDTGGSIRQPAS G G Sbjct: 133 SYYGKVQNPW---DRTR--VPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGLSG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQAG + ++ D A+++ + G+DE D+T + DYER Sbjct: 188 LKPTYGLVSRYGMIAFASSLDQAGPMAKSCEDMALMMNVMTGFDERDSTSLQRDKEDYER 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L + +QG+ VG+PKE+ D LS + + I+ + GA+IVEISLP+TQ ++P YY Sbjct: 248 ELGKPLQGLRVGLPKEFFADGLSSEVAAVVESAIAEYRKLGAEIVEISLPNTQLSIPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+R+DGVRYG R E D+LEMY +R+ GFG EVK RI+IGTYVLS+ Sbjct: 308 VLAPAEASSNLSRFDGVRYGHRAAEYDDLLEMYCKSRAEGFGAEVKRRILIGTYVLSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A++IR LI DF +AF Q DVI+ PT P +AF G++ N+ SM D++ Sbjct: 368 YDAYYLKAQQIRRLIAEDFAKAFTQ-CDVIMGPTAPGTAFRSGEKANDPVSM--YLEDLY 424 Query: 435 TVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+AVN+AGLP +S+PA K++P+GLQ+IG F E + +VG ++ Sbjct: 425 TIAVNLAGLPGMSIPAGFASVDGKQLPVGLQVIGNYFDEARMLNVGHAYQQ 475 >gi|239631841|ref|ZP_04674872.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526306|gb|EEQ65307.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 484 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/481 (46%), Positives = 317/481 (65%), Gaps = 11/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + ++LRS +++ +LVD + I +++++A++ + A A+ A D I D Sbjct: 7 SIDQLHEQLRSGKVTSSQLVDETLAGINQLDAEVDAFLALNADGAKEKAATVDAAGI-AD 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PI IKD TKG+ T A S +L F P Y++TV QKL GA+ +GK NMDEF Sbjct: 66 DQPLAGVPIAIKDNIVTKGVVTTAASKMLANFNPIYDATVMQKLDAAGAINVGKTNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + + W D T PGGSSGGS+AAVA A++G+DTGGSIRQP Sbjct: 126 AMGSSTENSAFKTTKNAW---DHTR--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+I+F+ SLDQ G +TR V+D+A LL IAG+DE D+T + Sbjct: 181 AAFNGIVGVKPTYGRVSRWGLIAFSSSLDQIGTLTRHVKDAAQLLNVIAGHDERDSTTAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 PVPD+ + Q I+GM + +PKEY + P + + +D GA + E+SLPHT Sbjct: 241 TPVPDFTAKIGQDIKGMKIALPKEYLGKGVDPAVADKIKAAAKQFEDMGATVTEVSLPHT 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 QYA+P+YYII+ +EASSNL R+DG+RYG R + K+I ++Y +RS GFG EVK RIM+G Sbjct: 301 QYAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVKNIEDVYVRSRSEGFGPEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD+++ +A ++RTLI RDF + F+ D+I+ PTTPT AF +G++ + +M Sbjct: 361 TFSLSAGFYDAYFKKAGQVRTLITRDFEDVFKD-YDLIIGPTTPTVAFKIGEKVTDPVTM 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AGLPA SVPA + MP+GLQLIG+ F E T+F V E + Y Sbjct: 420 --YMNDILTIPVNLAGLPAASVPAGFVD-GMPVGLQLIGKHFDESTIFQVAAAFEAQNDY 476 Query: 487 F 487 Sbjct: 477 L 477 >gi|312112439|ref|YP_003990755.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Geobacillus sp. Y4.1MC1] gi|311217540|gb|ADP76144.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. Y4.1MC1] Length = 486 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/483 (46%), Positives = 319/483 (66%), Gaps = 12/483 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN--G 66 +SE L+ K+IS +LVD + I ++ A++ + + ARA A+E D ++ Sbjct: 8 ISELHTLLQKKEISVSDLVDESFRRIGEVEDKVQAFLTLNEENARAKAKELDDKLAKEEN 67 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D L GIPIGIKD TKG+ T S IL F P Y++TV ++L + GA+ +GKLNMDE Sbjct: 68 DFGVLFGIPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVMERLNEAGAITVGKLNMDE 127 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 128 FAMGSSTENSGFQLTRNPWDL-----ERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQ 182 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+ IAG D D+T Sbjct: 183 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQVIAGLDPMDSTSA 242 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ VP+Y AL I+G+ + +PKEY + ++ + ++ + L++ GA E+SLPH Sbjct: 243 NVEVPNYVEALTGDIKGLKIAVPKEYLGEGVAEEVRQSVLDALKVLEELGATWEEVSLPH 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+ Sbjct: 303 SKYALATYYLLASSEASANLARFDGVRYGYRADNAKNLIDMYKQTRSEGFGNEVKRRIML 362 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G E S Sbjct: 363 GTFALSSGYYDAYYKKAQKVRTLIKQDFEKVFEK-YDVIVGPTTPTPAFKIG--EKTSDP 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + ND+ T+ VN+AG+P ISVP +P+GLQ+IG+ F E T++ V E+ Sbjct: 420 LTMYANDILTIPVNLAGVPGISVPCGFV-NGLPVGLQIIGKHFDESTVYRVAHAFEQATD 478 Query: 486 YFR 488 Y + Sbjct: 479 YHK 481 >gi|168179086|ref|ZP_02613750.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum NCTC 2916] gi|226950692|ref|YP_002805783.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum A2 str. Kyoto] gi|254790387|sp|C1FLD9|GATA_CLOBJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|182669992|gb|EDT81968.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum NCTC 2916] gi|226843595|gb|ACO86261.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum A2 str. Kyoto] Length = 485 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 320/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E +D L +K++ A E+ +++ I ++++ AY+ V ++A A+E D + Sbjct: 2 DLTKLTAHELKDILSNKEVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDVK 61 Query: 63 I-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I N + + L GIP+GIKD KG+ S IL G+ Y++ VT+K+ ++LGK Sbjct: 62 IEKNEELKALSGIPVGIKDNINVKGMQNTCASKILQGYTSPYDAHVTEKIKKEEGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW + PGGSSGGS+ AVAG S+GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKLAKNPWDL-----ERVPGGSSGGSAVAVAGCEATLSLGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G+++F +LDQ G + + V D A+L AIAG D+ Sbjct: 177 GSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + VPDY+++L + I+G +GIPKE+ + L + K+ ++ I L++ GA++ Sbjct: 237 DFTTADKEVPDYKKSLTKDIKGKKIGIPKEFFGEGLDEKVRKSVEEAIKVLEENGAEVKP 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + KD ++Y +RS GFG EVK Sbjct: 297 CSLPLMDYALSAYYIISSAEASSNLARFDGIRYGHRSKNFKDAQDIYLKSRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A K+R LIK DF F+ D I++PT+PT+AF +G+++ Sbjct: 357 RRIMLGTYVLSAGYYDAYYKKALKVRKLIKDDFQRVFKD-FDAIVSPTSPTTAFKVGEKK 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ SM +D++TV +++AG+PAIS+P + + +P+GLQ+I F+E+ LF++ Sbjct: 416 DDVMSM--YLSDIYTVPISVAGVPAISLPCGMID-GLPVGLQIISDYFKEDVLFNLAYNY 472 Query: 481 EKEAGYFR 488 E+ + + Sbjct: 473 EQSVDFHK 480 >gi|294782465|ref|ZP_06747791.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fusobacterium sp. 1_1_41FAA] gi|294481106|gb|EFG28881.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fusobacterium sp. 1_1_41FAA] Length = 484 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 324/482 (67%), Gaps = 14/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S +ISA E+V+S+ + IE ++ +++ + + A A++ D++ NG Sbjct: 6 LTAKELRDKFLSGEISAEEIVNSFYERIEKIEDKVKSFVSLRKELALEEAKKLDEKRKNG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD +G + +CS IL+ + Y++TV +KL + A++LG NMD Sbjct: 66 EKLGKLAGIPLAIKDNILMEGQKSTSCSKILENYVGIYDATVVKKLKEEDAIILGVTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TSY+ +PW +D PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 126 EFAMGSTTKTSYHHKTANPW-DLDRV----PGGSSGGAAASVAAQEVPISLGSDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 181 QPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAGADDYDATV 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY L++ I+G+ VG+PKEY ++ L+P I K ++ LK+ GA+IVE+SLP Sbjct: 241 SKNEVPDYTEFLNKDIKGLKVGLPKEYFIEGLNPEIKKIVDNSVNALKELGAEIVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TR+ GFG EVK RIM Sbjct: 301 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRTEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ +D+++ +A+K+RTLIK+DF VDVILTP P+ AF L ++ Sbjct: 361 MGTYVLSAGFFDAYFKKAQKVRTLIKQDFENVLAD-VDVILTPVAPSVAFKL----SDVK 415 Query: 425 SMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +Y D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF E TL V +E + Sbjct: 416 TPIELYLEDIFTISANLAGIPAISLPGGLLD-NLPVGVQFMGRPFDEGTLIKVSSALENK 474 Query: 484 AG 485 G Sbjct: 475 IG 476 >gi|212638108|ref|YP_002314628.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anoxybacillus flavithermus WK1] gi|226709586|sp|B7GFW3|GATA_ANOFW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|212559588|gb|ACJ32643.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Anoxybacillus flavithermus WK1] Length = 485 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/482 (47%), Positives = 318/482 (65%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGD 67 VSE L K+IS +LVD + I + ++ A++ + ++ARA A+E D+++ + Sbjct: 8 VSELHSLLHKKEISVSDLVDESFKRIHEVDEKVQAFLTLNEEQARAKAKELDEKLATEKE 67 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIGIKD TKG+ T S IL F P Y++TV ++L + AV +GKLNMDEF Sbjct: 68 FGLLFGMPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVVERLNEADAVTVGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 128 AMGSSTENSGFQLTRNPWDL-----ERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+ I+G D D+T N Sbjct: 183 AAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQVISGLDPMDSTSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPDY AL IQG+ + +PKEY + +S + ++ + L+ GA E+SLPH+ Sbjct: 243 VDVPDYVSALTGDIQGLKIAVPKEYLGEGVSEEVRQSVLDALKVLEGLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY+++ +EAS+NLAR+DGVRYG R + K+++EMY+ TRS GFG EVK RIM+G Sbjct: 303 KYALATYYLLASSEASANLARFDGVRYGYRTDHAKNLMEMYKQTRSEGFGNEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIK+DF FE+ DVI+ PTTPT AF +G E S + Sbjct: 363 TFALSSGYYDAYYKKAQKVRTLIKQDFENVFEK-YDVIIGPTTPTPAFKIG--EKTSDPL 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+P IS+P +P+GLQ+IG+ F E T++ V E+ Y Sbjct: 420 TMYANDILTIPVNLAGVPGISIPCGFV-NGLPVGLQIIGKHFDESTIYRVAHAFEQATDY 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|312958976|ref|ZP_07773495.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas fluorescens WH6] gi|311286746|gb|EFQ65308.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas fluorescens WH6] Length = 483 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/476 (47%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + + I ++N +I + + A + A+ +D R Sbjct: 1 MHHMTLAEIARGLADKKFSSEELTTTLLARIAELGPKVNCFISLTEELALSQAKAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+GI T S +LD F+ Y++TV KL GAV LGK N Sbjct: 61 ANGENGALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVAKLAAAGAVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+SYYG V +PW + PGGSSGGS+AAVA A+ TDTGGS Sbjct: 121 MDEFAMGSANESSYYGAVKNPWNL-----EHVPGGSSGGSAAAVAARFLPAATATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FT G+KPTYGR SR G+I++A SLDQ G + RT D AILL+ +AG+D D+ Sbjct: 176 IRQPAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDTQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ SI+G+ +G+PKEY L P I + I L+ GA I E+S Sbjct: 236 TSIDEPVPDYSASLNTSIKGLRIGVPKEYFSAGLDPRIAELVHNSIKELEKLGAVIKEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNNQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPKDLTDLYKRSRGEGFGAEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AFE+ VDVIL PTTP A+ +G + + Sbjct: 356 IMVGAYALSAGYYDAYYLKAQKIRRLIKNDFMAAFEE-VDVILGPTTPNPAWKIGAKTGD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDLYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|228931811|ref|ZP_04094707.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|301052034|ref|YP_003790245.1| glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis CI] gi|228827791|gb|EEM73529.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|300374203|gb|ADK03107.1| glutamyl-tRNA amidotransferase subunit A [Bacillus cereus biovar anthracis str. CI] Length = 485 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/476 (47%), Positives = 317/476 (66%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL D + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKDADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQ 474 >gi|159903239|ref|YP_001550583.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. MIT 9211] gi|229485998|sp|A9B9W7|GATA_PROM4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|159888415|gb|ABX08629.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. MIT 9211] Length = 487 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/481 (45%), Positives = 328/481 (68%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E R RL +++IS++ELV+ I++ +++++A++++ AR A+ D+ ++G Sbjct: 1 MTIAEWRQRLNNREISSLELVNEQFARIKDVDNKLHAFLKLEEDSARENAKRIDEARLSG 60 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP IKD TKG+ T S +L+ F P YESTVTQ+LW+ GA++LGK N+D Sbjct: 61 KELPPLAGIPFAIKDNLCTKGVKTTCSSKMLESFVPPYESTVTQRLWEAGAILLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+AAVA LC A++G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGATSNPWDL-----SRVPGGSSGGSAAAVASGLCLAALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G T +V D+A +L+ IAG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTSVEDAAEVLQVIAGKDPLDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP++ SI+G+ +G+ KE + + +S + ++ + + L+ GA+++++S Sbjct: 236 LDKPVPNFSEYFSDSIKGLRIGLIKECFEQEGISLEVKESVLKAANQLQSLGAELIDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R G++ L M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRQHGEENLSAMTSLSRAKGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ +D++Y +A+K+RTLI RDF +FE+ VD++LTPT+P++AF G +N+ Sbjct: 356 LIGTYALSAGYFDAYYKKAQKVRTLISRDFANSFEK-VDLLLTPTSPSTAFKAGSHDNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +D+ T+ VN+AGLPAISVP ++ +P+GLQLIG E+ L V E+ Sbjct: 415 LAM--YLSDLLTIPVNLAGLPAISVPCGFDKEGLPIGLQLIGDVLGEQRLLQVAHHYEQA 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|297583060|ref|YP_003698840.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus selenitireducens MLS10] gi|297141517|gb|ADH98274.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus selenitireducens MLS10] Length = 489 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/473 (46%), Positives = 319/473 (67%), Gaps = 12/473 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA---R 69 D+LR+ + + +VD +I I+ + + A++ + + A AE D+++ GD Sbjct: 9 HDQLRNGETTVRTIVDGFIARIKEVDGDVGAFLRIDERAAIEKAEALDEQLEKGDLSVDE 68 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+GIKD TKG+ T S +LD F P +++TV +KL A+ +GKLNMDEFAM Sbjct: 69 ALFGLPVGIKDNIVTKGMKTTCASQLLDNFEPIHDATVVEKLAKTEAIAVGKLNMDEFAM 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSSNE S Y PV +PW D T PGGSSGGS+AAVA ++G+DTGGSIR+PA+ Sbjct: 129 GSSNENSSYHPVRNPW---DLTR--VPGGSSGGSAAAVAAGEVPYTLGSDTGGSIREPAA 183 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 + G G+KPTYGR SR G+++FA SLDQ G +TR D+A++L+AIAGYD+ D+T N+ Sbjct: 184 YCGVTGMKPTYGRVSRFGLVAFASSLDQIGPLTRNAEDNALVLQAIAGYDKRDSTSANVA 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VPD+ + L+ ++G+ V +PKEY + + + + I LK GA E+SLPH++Y Sbjct: 244 VPDFSKDLNAGVKGLKVAVPKEYLGEGVDEGVKAQVTEAIEELKKQGAVCEEVSLPHSKY 303 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A AYY+IS +EAS+NLAR+DG+RYG+R EG+++L+ Y +RS GFG EVK RIM+GT+ Sbjct: 304 ATAAYYLISSSEASANLARFDGIRYGVRKEGENLLDTYRQSRSEGFGDEVKRRIMLGTFA 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD++Y +A+++RTLIK+DF + FE DVI+ PT PT AF +G++ ++ +M Sbjct: 364 LSSGYYDAYYDKAQRVRTLIKQDFEKLFET-YDVIVGPTAPTVAFKIGEQVDDPLTM--Y 420 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ TV +N+AG+PAIS+P E MP+GLQ+IG+ F E L+ V ++ Sbjct: 421 ANDIMTVPMNLAGVPAISIPCGFSE-GMPVGLQIIGKHFDEAMLYRVAHAYQQ 472 >gi|308172554|ref|YP_003919259.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus amyloliquefaciens DSM 7] gi|307605418|emb|CBI41789.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Bacillus amyloliquefaciens DSM 7] gi|328552319|gb|AEB22811.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus amyloliquefaciens TA208] gi|328910663|gb|AEB62259.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Bacillus amyloliquefaciens LL3] Length = 485 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/485 (46%), Positives = 324/485 (66%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + KDI +LVD + I + + ++ A++++ ++ARA A+E D+ + D Sbjct: 8 ITELKQMIHKKDIKISDLVDESYKRIASVDDKVQAFLQLDEERARAYAKELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV ++L AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVERLQAAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKATKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGPDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+G+ + +PKEY + + ++ + L+ GA E+SL Sbjct: 240 SANVEVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEAKESVLAALKVLEGLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TRS GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRSEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G E S Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--EKTS 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP + +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGFAD-GLPLGLQIIGKHFDESTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|302327689|gb|ADL26890.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 478 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 303/476 (63%), Gaps = 12/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +L + +A +L + ++ IE S +NAYI V+ +A A+ESDKR G + Sbjct: 10 IQELQAQLANGSTTAEKLAQASLEKIE-STKNLNAYISVLNDRALERAKESDKRRAEGKS 68 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L+GIP+ +KD G T A S ILD F Y +T +KL GA+++GK NMDEF Sbjct: 69 LGALDGIPVAVKDNMCLTGTRTTAASKILDNFVAPYTATALEKLEAAGAIIVGKTNMDEF 128 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNETSYYGPV +P + PGGSSGGS+ AVA ++G+DTGGSIRQP Sbjct: 129 AMGSSNETSYYGPVKNPL-----DESRVPGGSSGGSAVAVASGTVPCALGSDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ TG VG+KPTYGR SR G++++A SLDQ G TVRD A LL AI G D D T Sbjct: 184 AACTGVVGLKPTYGRVSRYGLLAYASSLDQIGPFGATVRDCATLLGAICGIDPHDNTTST 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P D+ L ++G +G+PKEY + L + + ++ GA I E+SLPH Sbjct: 244 RPTEDFTAKLGTGVKGKVIGVPKEYFGEGLDAECKAAIENMLKKMEAEGATIKEVSLPHI 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 YA+ +YYII+ AEASSNL+RYDGVRYG R E + + ++Y +RS GFG+EV+ RI++G Sbjct: 304 SYAVSSYYIIATAEASSNLSRYDGVRYGYRSAEARKLFDLYAKSRSEGFGKEVQRRILLG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +YVLS+ YD++Y++A+K+R LI DFTEAF+ DVI +PT P PL N S M Sbjct: 364 SYVLSAGFYDAYYVQAQKVRRLITDDFTEAFKT-CDVIASPTMP--GLPLKCGMNESDPM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D++TV++N+AGLP +SVP + +P+GLQ IG+PF+E L +V + E+ Sbjct: 421 AVYLSDIYTVSLNLAGLPGVSVPCGMA-GGLPVGLQWIGKPFQEADLLAVAEATER 475 >gi|261416840|ref|YP_003250523.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373296|gb|ACX76041.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 472 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 303/476 (63%), Gaps = 12/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +L + +A +L + ++ IE S +NAYI V+ +A A+ESDKR G + Sbjct: 4 IQELQAQLANGSTTAEKLAQASLEKIE-STKNLNAYISVLNDRALERAKESDKRRAEGKS 62 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L+GIP+ +KD G T A S ILD F Y +T +KL GA+++GK NMDEF Sbjct: 63 LGALDGIPVAVKDNMCLTGTRTTAASKILDNFVAPYTATALEKLEAAGAIIVGKTNMDEF 122 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNETSYYGPV +P + PGGSSGGS+ AVA ++G+DTGGSIRQP Sbjct: 123 AMGSSNETSYYGPVKNPL-----DESRVPGGSSGGSAVAVASGTVPCALGSDTGGSIRQP 177 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ TG VG+KPTYGR SR G++++A SLDQ G TVRD A LL AI G D D T Sbjct: 178 AACTGVVGLKPTYGRVSRYGLLAYASSLDQIGPFGATVRDCATLLGAICGIDPHDNTTST 237 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P D+ L ++G +G+PKEY + L + + ++ GA I E+SLPH Sbjct: 238 RPTEDFTAKLGTGVKGKVIGVPKEYFGEGLDAECKAAIENMLKKMEAEGATIKEVSLPHI 297 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 YA+ +YYII+ AEASSNL+RYDGVRYG R E + + ++Y +RS GFG+EV+ RI++G Sbjct: 298 SYAVSSYYIIATAEASSNLSRYDGVRYGYRSAEARKLFDLYAKSRSEGFGKEVQRRILLG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +YVLS+ YD++Y++A+K+R LI DFTEAF+ DVI +PT P PL N S M Sbjct: 358 SYVLSAGFYDAYYVQAQKVRRLITDDFTEAFKT-CDVIASPTMP--GLPLKCGMNESDPM 414 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D++TV++N+AGLP +SVP + +P+GLQ IG+PF+E L +V + E+ Sbjct: 415 AVYLSDIYTVSLNLAGLPGVSVPCGMA-GGLPVGLQWIGKPFQEADLLAVAEATER 469 >gi|154685163|ref|YP_001420324.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus amyloliquefaciens FZB42] gi|166217642|sp|A7Z267|GATA_BACA2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|154351014|gb|ABS73093.1| GatA [Bacillus amyloliquefaciens FZB42] Length = 485 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/485 (46%), Positives = 325/485 (67%), Gaps = 17/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+I +LVD + I + + ++ A++++ ++ARA A+E D+ + D Sbjct: 8 ITELKQMIHKKEIKISDLVDESYKRIASVDDKVQAFLQLDEERARAYAKELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV ++L AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVERLQAAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKATKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGPDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+G+ + +PKEY + + ++ + L+D GA E+SL Sbjct: 240 SANVEVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEAKESVLAALKVLEDLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TRS GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRSDNADNLIDLYKQTRSEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G E S Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--EKTS 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ND+ T+ VN+AG+P ISVP + +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 DPLTMYANDILTIPVNLAGVPGISVPCGFAD-GLPLGLQIIGKHFDEGTVYRVAHAFEQA 475 Query: 484 AGYFR 488 + + Sbjct: 476 TDHHK 480 >gi|114319329|ref|YP_741012.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Alkalilimnicola ehrlichii MLHE-1] gi|122312678|sp|Q0ACB5|GATA_ALHEH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|114225723|gb|ABI55522.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Alkalilimnicola ehrlichii MLHE-1] Length = 484 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/481 (48%), Positives = 330/481 (68%), Gaps = 10/481 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V+E LR+ + S+ E+ ++++ I+ N NA I ++A AAA+ +D+RI G+A Sbjct: 6 VAEIAAALRAGEFSSREVTEAFLARIDALNPVTNAVITPTPEQALAAADAADQRIAAGEA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F T+G+ T S +LD F Y++TV KL D G VMLGK NMDEFA Sbjct: 66 GPLTGVPLVHKDIFCTQGVRTSCGSRMLDNFTAPYDATVVGKLADAGMVMLGKANMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNETSYYGPV +PW +D+ SSGGS+AAVAG L A+ GTDTGGSIRQPA Sbjct: 126 MGSSNETSYYGPVKNPW-DLDAVPGG----SSGGSAAAVAGRLAPAATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I+FA SLDQ G + RT D A+LL +AG+D D+T V+ Sbjct: 181 ALCGLSGLKPTYGRVSRYGMIAFASSLDQGGPMARTCEDLALLLGGMAGFDTRDSTSVDH 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY L++S++G+ +G+PKE+ + L P + + + I ++ GA+I EISLP+T+ Sbjct: 241 VVPDYTETLNRSVKGLKIGVPKEFFGEGLDPEVRRVVEAAIEVYREEGAEIREISLPNTR 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 +++P YY+I+PAEASSNL+RYDGVRYG R E D+ ++Y+ +R GFG+EVK RI++GT Sbjct: 301 HSVPVYYVIAPAEASSNLSRYDGVRYGYRCEDPSDLEDLYKRSRGEGFGEEVKRRILVGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++YL+A+++R LI+ DFT A Q VDVI+ PT+PT AF +G+ ++ M Sbjct: 361 YALSAGYYDAYYLKAQQVRRLIRDDFTRAL-QAVDVIMGPTSPTVAFNIGERTDDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 +DV+T+AVN+AG+P +S+PA + + P+GLQ+IG F E L +VG ++ + Sbjct: 419 -YLSDVYTLAVNLAGVPGLSIPAGFAQGR-PVGLQIIGDYFDEARLLNVGHKYQQVTDWH 476 Query: 488 R 488 R Sbjct: 477 R 477 >gi|332360521|gb|EGJ38331.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK1056] Length = 488 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/486 (44%), Positives = 307/486 (63%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKERETAVDSFITVSEEEALAQATALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGSFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F EET++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|229176898|ref|ZP_04304294.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus 172560W] gi|228606571|gb|EEK63996.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus 172560W] Length = 485 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/480 (47%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L SK+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNSKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|317127166|ref|YP_004093448.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Bacillus cellulosilyticus DSM 2522] gi|315472114|gb|ADU28717.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cellulosilyticus DSM 2522] Length = 485 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/482 (45%), Positives = 323/482 (67%), Gaps = 15/482 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +++ + L K++S +LV+ I S+++A++ + + ARA A+E D+++ G Sbjct: 8 IADIHELLHKKELSVTDLVNESYNRINQVESKVDAFLHLTEELARAKAKELDEQL--GAI 65 Query: 69 RDLEG----IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + LEG +PIGIKD TKGI T S +L+ F P + +TV KL D A+ +GKLNM Sbjct: 66 QTLEGTLFGLPIGIKDNIVTKGIRTTCASKLLENFEPQHNATVVNKLADARAITIGKLNM 125 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNE S Y +PW PGGSSGGS+A+VA S+G+DTGGSI Sbjct: 126 DEFAMGSSNENSGYKLTRNPWDL-----NRVPGGSSGGSAASVAAGEVLFSLGSDTGGSI 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R+PASF G VG+KPTYGR SR G+++FA SLDQ G ITR V D+A +L+AI+G+D+ D+T Sbjct: 181 REPASFCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNAYVLQAISGHDKMDST 240 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VP + L+ I+G+ V +P EY + +S + + Q + L+ GA E+SL Sbjct: 241 SANVDVPSFTNGLNGDIKGLKVAVPSEYIGEGVSSEVREQVMQALKTLESLGATWEEVSL 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PH++YA AYY+++ +EAS+NLAR+DG+RYG+RVE ++++E Y +RS GFG EVK RIM Sbjct: 301 PHSKYATAAYYLLASSEASANLARFDGIRYGVRVEEENLIETYRKSRSEGFGDEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+ LSS YD++Y +A+++RTLIK+DF FE+ DVI+ PT PT+AF +G++ ++ Sbjct: 361 LGTFALSSGYYDAYYKKAQQVRTLIKQDFENVFEK-YDVIIGPTAPTTAFKIGEKTDDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +M D+ T+ VN+AG+PAISVP+ L +P+GLQ+IG+ F E T++ V E+ Sbjct: 420 TM--YATDILTIPVNLAGVPAISVPSGLA-GGLPVGLQIIGKHFDEATVYRVAYAFEQAT 476 Query: 485 GY 486 + Sbjct: 477 NF 478 >gi|270308501|ref|YP_003330559.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase [Dehalococcoides sp. VS] gi|270154393|gb|ACZ62231.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase [Dehalococcoides sp. VS] Length = 486 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 212/483 (43%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +++S L+ + +S+ EL +++ IE ++ A++ V A + A+ +D Sbjct: 1 MTDLVKLTIAQSHKLLKERKLSSAELTKAHLDRIEKLEPEIKAFMTVCPDSALSQAQAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I G R L GIP+ +KD TKGI T S +L+ F P Y + V KL + GAV+LG Sbjct: 61 EAIKQGHIRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVPPYNAHVVDKLAEEGAVLLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S + +PW + PGGSSGGS+A VA S+G+DT Sbjct: 121 KTNMDEFAMGSSTENSAFFTTRNPWNTAK-----VPGGSSGGSAACVAASEAVFSLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G+KP+YG SR G+++FA SLDQ G T+ V D A+++ AIAG+D+ Sbjct: 176 GGSIRQPASFCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKDVLDCALVMNAIAGFDD 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI- 299 D+T V VPD+ LD I+G +G+PKEY + I + +S L GA + Sbjct: 236 RDSTSVPQTVPDFSSCLDGDIKGFKLGVPKEYFSQNMRADIAEKINDALSVLSGLGASVD 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E+SLPHT YAL YYI++P+EAS+NL+RYDGV+YG + +++ E E TR+ GFG E Sbjct: 296 HEVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGPE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD+ Y++A+K+RTLI ++F AFE+ D ++TPTTP F +G+ Sbjct: 356 VKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEK-YDALITPTTPNLPFSIGE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M D T+ +N+AGLPAIS+PA + +P+GLQ+IG+PF ++T+ + Sbjct: 415 KLSDPFEM--YMCDTCTIPINIAGLPAISIPAGFVD-GLPVGLQIIGKPFADQTIMRIAH 471 Query: 479 IIE 481 + Sbjct: 472 AFQ 474 >gi|262199915|ref|YP_003271124.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Haliangium ochraceum DSM 14365] gi|262083262|gb|ACY19231.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Haliangium ochraceum DSM 14365] Length = 501 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/493 (45%), Positives = 320/493 (64%), Gaps = 11/493 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE ++ +E R+++ ++SA L ++++ IE + + A+++V + A AAA+ D Sbjct: 1 MSETIHLSAAEQARRVKAGELSARALTEAHLARIEARDGAIGAFLKVDREGALAAADAVD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + G D L G+PI +KD T+G+ T A S IL G+ P Y+ T +L GAV+L Sbjct: 61 QAVAAGRDPGPLAGVPIALKDLLVTRGLATTAGSKILGGWVPPYDGTAVARLRAAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLN+DEF MGSSNE S +GP +PW +D + SGGS+AAVA F CAA++GTD Sbjct: 121 GKLNLDEFGMGSSNENSAFGPCRNPW-DLDRVSGGS----SGGSAAAVASFQCAAALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYGR SR G+I+FA S DQ G +TRTV D+A+LL+ IAG D Sbjct: 176 TGGSIRQPAAFCGLVGLKPTYGRVSRYGMIAFASSFDQIGPLTRTVEDAALLLELIAGLD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DA+ ++ PVP Y AL + + G +G+P EY + ++ + GA++ Sbjct: 236 PRDASSIDAPVPAYREALAEGLAGRRIGLPDEYFRGGADAEVLAAVERAAEVFRGLGAEL 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQ 357 V +SLPHT+YALP YY+++PAEASSNLARYDGVR+G R G +L+MY ++R GFG Sbjct: 296 VPVSLPHTKYALPVYYLLAPAEASSNLARYDGVRFGQREAAPGASLLDMYRSSRGAGFGT 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GT+ L + YD++Y +A+K+R LI RDF +AFEQ VD++L+PTTPT+AF LG Sbjct: 356 EVKRRIMLGTFALRAGHYDAYYAKAQKVRALITRDFAQAFEQ-VDLLLSPTTPTAAFRLG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + M D+FT+ N+AGLP +++P +P+G+QL+ E L + Sbjct: 415 EKTQDPVDM--YRADIFTLGCNLAGLPGLNMPCGFTGAGLPIGMQLLAPALGERALIAAA 472 Query: 478 QIIEKEAGYFRPH 490 E+E G H Sbjct: 473 AAYEREVGAIDGH 485 >gi|307266287|ref|ZP_07547827.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|306918665|gb|EFN48899.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter wiegelii Rt8.B1] Length = 488 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/481 (46%), Positives = 325/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A I + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALITITEDFALQKAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + G ++LGK Sbjct: 62 IKKGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG E +D+++MY TRS GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAEKYEDLIDMYMVTRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIIGPTSPTVAFKIGERAN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAFE 472 Query: 482 K 482 + Sbjct: 473 Q 473 >gi|237740450|ref|ZP_04570931.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 2_1_31] gi|229422467|gb|EEO37514.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 2_1_31] Length = 484 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 219/481 (45%), Positives = 321/481 (66%), Gaps = 12/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E RD+ S +ISA E+V+S+ + IE ++ +++ + + A A++ D++ NG Sbjct: 6 LTAKELRDKFLSGEISAEEIVNSFYERIEKIEDKVKSFVSLRKELALEEAKKLDEKRKNG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD +G + +CS IL+ + Y++TV +KL + A++LG NMD Sbjct: 66 EKLGKLAGIPLAIKDNILMEGQKSTSCSKILENYVGIYDATVVKKLKEEDAIILGVTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ +TSY+ +PW +D PGGSSGG++A+VA S+G+DTGGS+R Sbjct: 126 EFAMGSTTKTSYHHKTANPW-DLDRV----PGGSSGGAAASVAAQEVPISLGSDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +TV D AI + IAG D+ DAT Sbjct: 181 QPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDVAICMNVIAGADDYDATV 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY L++ I+G+ VG+PKEY ++ L+P I K ++ LK+ GA+IVE+SLP Sbjct: 241 SKNEVPDYTEFLNKDIKGLKVGLPKEYFIEGLNPEIKKIVDNSVNALKELGAEIVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+P YY+++PAEASSNLAR+DG+RYG R + D+ +Y TR+ GFG EVK RIM Sbjct: 301 HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRTEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLS+ +D+++ +A+K+R LIK+DF + VDVILTP P+ AF L + Sbjct: 361 MGTYVLSAGFFDAYFKKAQKVRNLIKQDFENVLAK-VDVILTPVAPSVAFKLS---DVKT 416 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + D+FT++ N+AG+PAIS+P L + +P+G+Q +G+PF E TL V +E + Sbjct: 417 PIELYLEDIFTISANLAGIPAISLPGGLLD-NLPVGVQFMGRPFDEGTLIKVSSALENKI 475 Query: 485 G 485 G Sbjct: 476 G 476 >gi|254479937|ref|ZP_05093185.1| Amidase, putative [marine gamma proteobacterium HTCC2148] gi|214039499|gb|EEB80158.1| Amidase, putative [marine gamma proteobacterium HTCC2148] Length = 486 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/475 (47%), Positives = 319/475 (67%), Gaps = 10/475 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V++ LR K ++VEL +Y+Q I + NA+I V + A AA +D+R+ +G+A Sbjct: 6 VAQLAQGLRDKSFTSVELTRAYLQRISELDQNYNAFITVNEENALNAARTADQRLASGEA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ KD F T+G+ T S +L F P Y++TV + + GA++LGK N+DEFA Sbjct: 66 TPLTGIPVAHKDIFCTRGMLTSCGSKMLGNFVPPYDATVISRFNEAGAIILGKTNLDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S+YGPV +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQPA Sbjct: 126 MGSSNENSHYGPVKNPWDT-----SLVPGGSSGGSAAAVAAMLAPAATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G G+KPTYGR SRLG+I++A SLDQ G + RT +D A+LL +AG+D D+T Sbjct: 181 AFCGITGLKPTYGRVSRLGMIAYASSLDQGGPLARTAQDCALLLNTMAGHDPLDSTSAVN 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 V DY +L++++QG+ +G+P+EY + L + + + L+ GA +V+ISLP++ Sbjct: 241 AVEDYTLSLNKNLQGLKIGLPREYFGEGLDSATGEQVRAALKELEAQGASLVDISLPNSD 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +PAYYII+PAEAS+NL+R+DGVRYG R + +++ ++Y TR GFG EVK RI++GT Sbjct: 301 LTIPAYYIIAPAEASTNLSRFDGVRYGHRCADPENLHDLYTRTREEGFGDEVKRRILVGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++Y +A++ R LIK DF +AFE+ VD+I PTTP AF LG + ++ +M Sbjct: 361 YALSAGYYDAYYKKAQQARRLIKNDFMDAFER-VDIIAGPTTPGPAFGLGAKSDDPIAM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DV+T+AVN+AGLP +SVPA + K P+GLQLIG F E L +V ++ Sbjct: 419 -YLEDVYTLAVNLAGLPGMSVPAGFVDSK-PVGLQLIGPHFGEAQLLNVAHRFQQ 471 >gi|228937600|ref|ZP_04100238.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970487|ref|ZP_04131138.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977056|ref|ZP_04137459.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis Bt407] gi|228782673|gb|EEM30848.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis Bt407] gi|228789219|gb|EEM37147.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822081|gb|EEM68071.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938093|gb|AEA13989.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus thuringiensis serovar chinensis CT-43] Length = 485 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ N+ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVNDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|257060424|ref|YP_003138312.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cyanothece sp. PCC 8802] gi|256590590|gb|ACV01477.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cyanothece sp. PCC 8802] Length = 482 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/482 (47%), Positives = 321/482 (66%), Gaps = 9/482 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +K+ +AVE+ ++ I + ++ +++ + A +A A+ D++I + Sbjct: 3 SIRELHQQLINKERTAVEITTEALERIAAIDPKVKSFLCITADRALETAKAVDQKIAAKE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIGIKD +TKGI T S IL+ F P YESTVTQKL + GAVM+GK N+DE Sbjct: 63 EIGLLAGIPIGIKDNMSTKGIPTTCGSRILENFIPPYESTVTQKLQEIGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW + PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYQVTANPWDL-----ERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYG SR G++++ SLDQ G RTV D AI+L AIAGYD D+T + Sbjct: 178 PASLCGVVGLKPTYGLVSRFGLVAYGSSLDQIGPFGRTVEDVAIVLGAIAGYDAKDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP+PDY L+ S++G+ +GI +E + L + +T + I L+ GA I IS P Sbjct: 238 KLPIPDYTTFLNPSLKGVKIGIIEETFGEGLDSIVAETVNKAIEQLQALGATIERISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EAS+NLARYD V+YG+R E +LEMY TR+ GFG EVK RIMIG Sbjct: 298 FRYGLPAYYIIAPSEASANLARYDAVKYGIREEAGTLLEMYNKTRAKGFGSEVKRRIMIG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF +AFE VDV++ PT+PT+AF G++ ++ SM Sbjct: 358 TYTLSAGYYDAYYLKAQKVRTLIKQDFDKAFES-VDVLVCPTSPTTAFKAGEKTDDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ T+ VN+AGLP +S+P ++ +P+GLQL+ E LF+VG E+ + Sbjct: 417 --YLSDLMTIPVNLAGLPGMSIPCGFDQQGLPIGLQLVSNVLEEGKLFNVGYAYEQSTEW 474 Query: 487 FR 488 + Sbjct: 475 HK 476 >gi|229083601|ref|ZP_04215930.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-44] gi|228699733|gb|EEL52389.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-44] Length = 485 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/480 (47%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL V +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTVTIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|49481704|ref|YP_034639.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118476070|ref|YP_893221.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus thuringiensis str. Al Hakam] gi|196040101|ref|ZP_03107403.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus NVH0597-99] gi|196045236|ref|ZP_03112468.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus 03BB108] gi|225862358|ref|YP_002747736.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus 03BB102] gi|228983561|ref|ZP_04143766.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229089435|ref|ZP_04220706.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-42] gi|229154073|ref|ZP_04282198.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC 4342] gi|229182702|ref|ZP_04309943.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BGSC 6E1] gi|300118939|ref|ZP_07056650.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus SJ1] gi|81614009|sp|Q6HP81|GATA_BACHK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217643|sp|A0R921|GATA_BACAH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790378|sp|C1EV88|GATA_BACC3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|49333260|gb|AAT63906.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415295|gb|ABK83714.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bacillus thuringiensis str. Al Hakam] gi|196023820|gb|EDX62495.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus 03BB108] gi|196028956|gb|EDX67561.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus NVH0597-99] gi|225788961|gb|ACO29178.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus 03BB102] gi|228600787|gb|EEK58366.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BGSC 6E1] gi|228629353|gb|EEK86055.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC 4342] gi|228693912|gb|EEL47604.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-42] gi|228776157|gb|EEM24518.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|298723555|gb|EFI64286.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus SJ1] Length = 485 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|163938311|ref|YP_001643195.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus weihenstephanensis KBAB4] gi|229009804|ref|ZP_04167024.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus mycoides DSM 2048] gi|229055146|ref|ZP_04195574.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH603] gi|229131308|ref|ZP_04260209.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-ST196] gi|229165286|ref|ZP_04293073.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH621] gi|229485751|sp|A9VRH7|GATA_BACWK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|163860508|gb|ABY41567.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus weihenstephanensis KBAB4] gi|228618111|gb|EEK75149.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH621] gi|228652129|gb|EEL08065.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-ST196] gi|228721222|gb|EEL72751.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH603] gi|228751422|gb|EEM01228.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus mycoides DSM 2048] Length = 485 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/480 (47%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRISDVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL V +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTVTIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDETTIYRVAHAFEQATDY 478 >gi|148239402|ref|YP_001224789.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp. WH 7803] gi|166217725|sp|A5GKM7|GATA_SYNPW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|147847941|emb|CAK23492.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp. WH 7803] Length = 487 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 228/485 (47%), Positives = 316/485 (65%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 MA++E R +L + ++SA EL D ++ IE ++A++EV A++ARA A+ D+ +G Sbjct: 1 MAIAEWRQQLANGEVSARELTDHHLARIEAVEPGIHAFLEVTAERARADADRVDEARASG 60 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIP+ IKD T+G+ T S +L+ F P YESTVT++LW GAV+LGK N+D Sbjct: 61 EDLPPLAGIPLAIKDNLCTRGVRTTCSSRMLEQFVPPYESTVTERLWAAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +GP +PW + PGGSSGGS+AAVA C ASIG+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGPTANPWNP-----EHVPGGSSGGSAAAVASGECLASIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +V D+A LL+ +AG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRISRYGLVAFASSLDQVGPFSHSVADAAELLQVMAGADPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N PVPDY AL + ++G+ VG+ KE + + L P + + L+ GA +V++S Sbjct: 236 LNAPVPDYCAALGRPVEGLKVGLVKECFEQEGLDPQVKASVLAAAQQLQALGADLVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRAEDAASLAAMTARSRAEGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF Q VDV+LTPT P +AF G ++ Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAF-QSVDVLLTPTAPGTAFRNGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +D+ T+ N+AGLPAISVP +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLSDLLTIPANLAGLPAISVPCGFDTGGLPIGVQLIGNVLEEPLLLQVAHQFEQA 472 Query: 484 AGYFR 488 A + Sbjct: 473 ADVMK 477 >gi|307150718|ref|YP_003886102.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cyanothece sp. PCC 7822] gi|306980946|gb|ADN12827.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cyanothece sp. PCC 7822] Length = 482 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/471 (47%), Positives = 309/471 (65%), Gaps = 9/471 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 ++ E +L K+ SAVE+ ++ IE +++++ + A +A A++ D +I Sbjct: 3 SIRELHQQLVKKERSAVEITTEALERIEALEPSLHSFLYITADQALETAKKVDAKIAAKQ 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + LEGIPI IKD T+GI T S IL+ F P YESTVTQKL + G + LGK N+DE Sbjct: 63 EIGLLEGIPIAIKDNMCTQGIPTTCGSKILENFVPPYESTVTQKLKELGTIALGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETS Y +PW PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FAMGSSTETSGYQVTANPWDL-----SRVPGGSSGGSAAAVAAEEAVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+ G VG+KPTYG SR G++++A SLDQ G RTV D+AI L AIAGYD D+T + Sbjct: 178 PASYCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDAAIFLGAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ +PDY + L + + +GI KE + L P + + Q + LK GAKI EIS P Sbjct: 238 NIEIPDYTKFLKPKLSKLKIGIIKETFGEGLDPVVGEAVHQAVEQLKKLGAKIKEISCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y LPAYYII+P+EAS+NLARYD V+YG+R + ++ MY TR+ GFG EVK RIM+G Sbjct: 298 FRYGLPAYYIIAPSEASANLARYDAVKYGIRKDADTLMSMYTGTRASGFGTEVKRRIMLG 357 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A+K+RTLIK+DF +AFE+ VDV++ PT PT+AF G++ ++ SM Sbjct: 358 TYALSAGYYDAYYLKAQKVRTLIKQDFDQAFEE-VDVLVCPTAPTTAFKAGEKTDDPLSM 416 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +D+ T+ VN+ GLP +S+P +P+G+QLI RE+ LF V Sbjct: 417 --YLSDLMTIPVNLGGLPGMSIPCGFDSLGLPIGMQLISNVLREDLLFQVA 465 >gi|148244481|ref|YP_001219175.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Vesicomyosocius okutanii HA] gi|166217727|sp|A5CX65|GATA_VESOH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146326308|dbj|BAF61451.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Candidatus Vesicomyosocius okutanii HA] Length = 480 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/464 (48%), Positives = 309/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L++KD S VEL Y+ I + S++NA+I V + A A+ +D +I G+A L GIP Sbjct: 13 LKNKDFSCVELTQYYLSRI--NQSKLNAFITVTDELALVQAQVADDKIALGNASILTGIP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 KD F TKG+ T A S +LD F Y++TV+QKL VMLGK NMDEFAMGSSNE Sbjct: 71 YAHKDIFCTKGVKTSAGSKMLDTFIAPYDATVSQKLNQMNLVMLGKTNMDEFAMGSSNEN 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+Y V +PW + PGGSSGGS+A+VAG L + GTDTGGSIRQPAS G G Sbjct: 131 SFYNAVKNPWNYLK-----IPGGSSGGSAASVAGGLSCFATGTDTGGSIRQPASLCGITG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR GII++A S DQAGI+T+T +D+AI+L +AG+DE D+T VPDY Sbjct: 186 LKPTYGRISRYGIIAYASSFDQAGIMTKTSQDAAIVLNIMAGFDEKDSTSAEQKVPDYTT 245 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ S+QG+ +G+PKE+ L L + + + GA + E+SLP++ YA+P YY Sbjct: 246 NLNNSLQGLIIGLPKEFFLSGLDNEVANNIMFAVKEFESMGAIVKEVSLPNSVYAIPTYY 305 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 II+ E SSNL+R DGVRYG R E K++ ++Y ++RS GFG+EVK RIMIGTY LS+ Sbjct: 306 IIASCECSSNLSRLDGVRYGYRSKESKNLEDLYLSSRSEGFGEEVKRRIMIGTYALSTGY 365 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R LI DF + FE+ VDVI+ P +PT+AF LG ++ + D++ Sbjct: 366 YDAYYLKAQKVRRLISNDFKKVFEK-VDVIMGPVSPTTAFDLGSVKD---PVSMYLADIY 421 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T++VN+AGLP +S+P + +P+GLQLIG + E L ++ Sbjct: 422 TLSVNLAGLPGMSIPVGFAQ-DLPVGLQLIGNYWSESKLLNIAH 464 >gi|167039199|ref|YP_001662184.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermoanaerobacter sp. X514] gi|300913206|ref|ZP_07130523.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter sp. X561] gi|307723780|ref|YP_003903531.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermoanaerobacter sp. X513] gi|229464484|sp|B0K3S3|GATA_THEPX RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166853439|gb|ABY91848.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter sp. X514] gi|300889891|gb|EFK85036.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter sp. X561] gi|307580841|gb|ADN54240.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter sp. X513] Length = 488 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/481 (46%), Positives = 325/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A + + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALVTITEDFALQKAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + G ++LGK Sbjct: 62 IKKGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG E +D+++MY TRS GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAEKYEDLIDMYMVTRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIIGPTSPTVAFKIGERAN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAFE 472 Query: 482 K 482 + Sbjct: 473 Q 473 >gi|118602376|ref|YP_903591.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166217712|sp|A1AW13|GATA_RUTMC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118567315|gb|ABL02120.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 480 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/464 (48%), Positives = 308/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 + KD S VEL Y+ I+ S+ +NA+I V + A A A+ +D +I +G+A L GIP Sbjct: 13 FKDKDFSCVELTQYYLNRIDQSD--LNAFITVTDELALAQAQVADDKIASGNANILTGIP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 KD F TKG+ T A S +LD F Y++TV+QKL VMLGK NMDEFAMGSSNE Sbjct: 71 YAHKDIFCTKGVKTSAGSRMLDTFVSPYDATVSQKLNQVNLVMLGKTNMDEFAMGSSNEN 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG V +PW + PGGSSGGS+A+VAG L + GTDTGGSIRQPAS G G Sbjct: 131 SFYGAVKNPWNYLK-----IPGGSSGGSAASVAGGLSCFATGTDTGGSIRQPASLCGITG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYGR SR G+I++A SLDQAG +T+T +D+AI+L +AG+DE D+T V VPDY Sbjct: 186 IKPTYGRISRYGMIAYASSLDQAGPMTKTAQDAAIVLNVMAGFDEKDSTSVEQKVPDYTT 245 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ SI+G+ +G+PKE+ L + + + GA + E+SLP+ YA+P YY Sbjct: 246 HLNDSIKGLIIGLPKEFFSSGLDDEVANNIMAAVKEFEAMGAIVKEVSLPNLAYAIPVYY 305 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I++P E SSNL+R DGVRYG R + K++ ++Y +RS GFG+EVK RIMIG Y LS+ Sbjct: 306 IVAPCECSSNLSRLDGVRYGYRAKNVKNLEDLYLRSRSEGFGEEVKRRIMIGAYALSAGY 365 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R LI DF + FEQ +DVI+ P +PT+AF LG ++ + D++ Sbjct: 366 YDAYYLKAQKVRHLISDDFKKVFEQ-IDVIMGPVSPTTAFDLGSVKD---PVSMYLADIY 421 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T++ N+AGLP +S+PA + +P+GLQLIG + E L ++ Sbjct: 422 TLSANLAGLPGMSIPAGFAQ-NLPVGLQLIGNFWSESRLLNIAH 464 >gi|193216378|ref|YP_001997577.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chloroherpeton thalassium ATCC 35110] gi|254790386|sp|B3QYQ7|GATA_CHLT3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|193089855|gb|ACF15130.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chloroherpeton thalassium ATCC 35110] Length = 477 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/483 (44%), Positives = 314/483 (65%), Gaps = 12/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL F + SE R++L SK +S + +Y+ IE ++NA+I V + A A A+ D Sbjct: 1 MSELIFRSYSELREKLLSKKVSCEAVTAAYLNRIEEKK-ELNAFIAVFKETALARAKALD 59 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ +G+A L G+P+ IK+ A +G S IL F Y++T +KL AV L Sbjct: 60 AKLADGNAPGKLFGLPMAIKNNIAIEGERLTCGSKILSKFNSIYDATAIKKLLAEDAVFL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMGSS ETSY+G + S+D T PGGSSGGS+ AVA ++G+D Sbjct: 120 GSANMDEFAMGSSTETSYFG---ATKNSVDPTK--VPGGSSGGSAVAVASDCALVALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF +G+KPTYGR SR G++++ S DQ G++++T D+A++L+ IAG D Sbjct: 175 TGGSVRQPASFCNIIGLKPTYGRVSRFGLVAYGSSFDQIGVLSKTAEDAALVLEVIAGED 234 Query: 240 ECDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T + PV Y + + G+ +GIP E+ D L I+ + + LK GA+ Sbjct: 235 AQDSTTSDEPVKPYVNEVASFKLSGLKIGIPNEFFTDALDKEIEAVVKAKLEALKAGGAE 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 ++ +SLP ++YAL YYI++ AEASSNLAR+DG RYG R E + D++EMY +RS GFG Sbjct: 295 LIPVSLPRSEYALATYYILATAEASSNLARFDGARYGYRSEKQSDLMEMYTASRSEGFGM 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTYVLS+ YD++Y +A+K+R LI+ D+ +AFE VDVI PT+P F LG Sbjct: 355 EVKRRIMLGTYVLSAGYYDAYYRKAQKVRRLIREDYLKAFET-VDVIAGPTSPIPPFTLG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ ++ +M D++TV N++G+PAISVPA ++ +P+G+Q IG+PF E T+ S+ Sbjct: 414 EKMDDPLAM--YLADIYTVTANLSGIPAISVPAGSTKENLPVGIQFIGKPFGEGTILSIA 471 Query: 478 QII 480 + + Sbjct: 472 KAV 474 >gi|42521706|ref|NP_967086.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bdellovibrio bacteriovorus HD100] gi|81618742|sp|Q6MRL7|GATA_BDEBA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|39574236|emb|CAE77740.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bdellovibrio bacteriovorus HD100] Length = 490 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/485 (46%), Positives = 314/485 (64%), Gaps = 15/485 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F ++SE + + ++ ISA E+ +++ IEN N ++NA+ + Q A AE D R Sbjct: 2 DLTFASLSEISEAVNNRSISAKEVTLHFLKRIENLNPKLNAFTSLNPQ-AVQEAEAVDAR 60 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I NG D L G+P GIK+ F TKG+ T A S IL+ F P Y++T +L +G V++GK Sbjct: 61 IANGEDVGLLAGVPFGIKEMFCTKGLTTTAGSKILENFVPPYDATAVARLKKSGIVVMGK 120 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN DEFAMGSSNETS++G V +PW + PGGSSGGS+AA A L A ++GTDTG Sbjct: 121 LNQDEFAMGSSNETSFHGVVKNPWDL-----ERVPGGSSGGSAAAQASRLVAGTLGTDTG 175 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYGR SR GI+++A SLDQAG + +VRD+A+ L+ I+G+D Sbjct: 176 GSIRQPASFCGIVGVKPTYGRVSRYGIVAYASSLDQAGPMVSSVRDAALTLEVISGFDPQ 235 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T VP + + L ++GM +G+ KEY L P + KT + + LK GA+IVE Sbjct: 236 DSTTTQKQVPAWSQNLKADVKGMKIGLMKEYMTGALDPDVQKTVENSVDTLKQLGAEIVE 295 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-----DILEMYENTRSIGFG 356 +S+P T +A+P YY+++ +EASSNL+RYDGV+YG R E K D+ E Y TR FG Sbjct: 296 VSVPMTAFAVPVYYLVAASEASSNLSRYDGVKYGYRAEFKNLSAVDLEEFYSQTRGQAFG 355 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIM+GTY LSS YD+ Y +A ++R LI + EAF++ DVIL+P T AF + Sbjct: 356 AEVKRRIMLGTYCLSSGYYDAFYNKAGQVRRLIMEQYLEAFKK-CDVILSPVTTAPAFKI 414 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G E S + ND+FT + N+AGLP +SVP + +P+G+QL F E+ + +V Sbjct: 415 G--ERVSDPLAMYLNDIFTTSTNLAGLPGMSVPFGQSQSGLPIGIQLTAGHFEEQKMLNV 472 Query: 477 GQIIE 481 +E Sbjct: 473 AFALE 477 >gi|206968285|ref|ZP_03229241.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus AH1134] gi|206737205|gb|EDZ54352.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus AH1134] Length = 485 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L SK+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNSKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|310778395|ref|YP_003966728.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ilyobacter polytropus DSM 2926] gi|309747718|gb|ADO82380.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ilyobacter polytropus DSM 2926] Length = 485 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 218/487 (44%), Positives = 327/487 (67%), Gaps = 12/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + E ++++ + +I AV+++ IE + S++++++ + + A A+ D Sbjct: 1 MDRFYKLTAFEIKEKISTGEIKAVDVIADIFDRIEKTESKIDSFVSLRKEGALEDAKNID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +++ G+A L G+P+ +KD + + +CS ILDG+ Y++TV +K+ ++ A+++ Sbjct: 61 EKVAKGEALGALAGVPVALKDNMVSYNEPSSSCSKILDGYIGVYDATVVKKIKESDAIII 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMD+FAMGSS TS Y +PW + PGGSSGGS++AVA ++G+D Sbjct: 121 GKTNMDQFAMGSSTVTSCYKKTKNPWDL-----ERVPGGSSGGSASAVAAQQAIITLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF GTVG+KPTYGR SR G+++FA SLDQ G T+TV+D+A+ + I+G D Sbjct: 176 TGGSIRQPASFCGTVGLKPTYGRVSRYGLMAFASSLDQIGPFTKTVKDAALCMNVISGSD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D+T ++ VPDY + L ++GM +G+PKEY ++ + P ++K + + ++ GA+I Sbjct: 236 DYDSTVQDVEVPDYTKFLTGDVRGMKIGVPKEYFVEGMKPEVEKAVRDAMVKFQEMGAEI 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 V+ISLPHT+Y + AYYII+PAEASSNLAR+DGVRYG R E K + ++Y +RS GFG E Sbjct: 296 VDISLPHTKYGVSAYYIIAPAEASSNLARFDGVRYGHRSENYKGVEDLYVKSRSEGFGDE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTYVLS+ YD++Y +A+K+R L+K DF +AFE+ VD+ILTPT P++AF L Sbjct: 356 VKRRIMMGTYVLSAGFYDAYYKKAQKVRRLMKEDFEKAFEK-VDIILTPTAPSAAFRLDD 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E+ + DVFT+ VNMAGLP ISVPA + +P+G+QL+G+PF E + Sbjct: 415 EKT---PLEMYLEDVFTIPVNMAGLPGISVPAEIV-NDLPVGIQLVGKPFGEGDILKAAD 470 Query: 479 IIEKEAG 485 EK G Sbjct: 471 AFEKARG 477 >gi|30018559|ref|NP_830190.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus ATCC 14579] gi|228956738|ref|ZP_04118524.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar pakistani str. T13001] gi|229107977|ref|ZP_04237604.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock1-15] gi|229125802|ref|ZP_04254828.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-Cer4] gi|229143103|ref|ZP_04271536.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-ST24] gi|229148708|ref|ZP_04276958.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus m1550] gi|296501134|ref|YP_003662834.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus thuringiensis BMB171] gi|39931465|sp|Q81IN3|GATA_BACCR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|29894100|gb|AAP07391.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC 14579] gi|228634716|gb|EEK91295.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus m1550] gi|228640376|gb|EEK96773.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-ST24] gi|228657659|gb|EEL13471.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-Cer4] gi|228675480|gb|EEL30697.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock1-15] gi|228802926|gb|EEM49758.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322186|gb|ADH05114.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus thuringiensis BMB171] Length = 485 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|254491730|ref|ZP_05104909.1| Amidase, putative [Methylophaga thiooxidans DMS010] gi|224463208|gb|EEF79478.1| Amidase, putative [Methylophaga thiooxydans DMS010] Length = 484 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/474 (47%), Positives = 314/474 (66%), Gaps = 10/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L S +IS+VEL Y+ I N +NA+I V +A A+ +DK + N A L GIP Sbjct: 13 LHSGEISSVELTQHYLDRINTHNKTLNAFISVTDDRALEQAKVADKMLANKTAGTLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F TKG+ T S +LD F Y++TV +K+ G V LGK NMDEFAMGSSNET Sbjct: 73 LAHKDIFCTKGVRTSCGSKMLDKFVAPYDATVVEKIDAAGMVTLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG V +PW TD+ PGGSSGGS+AA+A L + GTDTGGSIRQP+S G Sbjct: 133 SFYGAVKNPW----DTDR-VPGGSSGGSAAAMAARLAPIATGTDTGGSIRQPSSLCNLTG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+FA SLDQAG + + D+A L+ ++G+D+ D+T V VPDY Sbjct: 188 MKPTYGRISRYGMIAFASSLDQAGPMANSAEDAAWLMNVMSGFDKRDSTSVERDVPDYTA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ S++G+T+G+PKEY + L P + T + I + GAK+ EI+LP+T A+P YY Sbjct: 248 TLNDSLEGLTIGLPKEYFGEGLDPKVAATVEAAIKSYESMGAKLKEITLPNTGLAIPTYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAE SSNL+R DGVR+G R E KD+L++Y +R GFG+EVK RIMIGTY LS+ Sbjct: 308 VVAPAECSSNLSRMDGVRFGHRAEDPKDLLDLYTRSRGEGFGEEVKRRIMIGTYALSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A++ R LI DF +AF++ VDVI+ PT PT AF G++ ++ +M D++ Sbjct: 368 YDAYYLKAQQCRRLISNDFQQAFKE-VDVIMGPTAPTPAFRFGEKTDDPVAM--YLEDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ N+AG+P +S+PA + +P+GLQ+IG F E L +V +++ + + Sbjct: 425 TINTNLAGIPGMSIPAGFVD-GLPVGLQIIGNYFDEARLLNVAHRYQQQTDWHK 477 >gi|182416528|ref|ZP_02947955.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium butyricum 5521] gi|237667757|ref|ZP_04527741.1| glutamyl-tRNA(Gln) amidotransferase subunit A 2 (Glu-ADTsubunit A 2) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379600|gb|EDT77082.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium butyricum 5521] gi|237656105|gb|EEP53661.1| glutamyl-tRNA(Gln) amidotransferase subunit A 2 (Glu-ADTsubunit A 2) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 479 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 217/479 (45%), Positives = 309/479 (64%), Gaps = 11/479 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E +++S+++++ ELV Y++ + ++N ++ V+A +A A A+E D RI NG Sbjct: 3 LTLKEMVSKIKSRELTSEELVSYYLKNLLEKEPKVNGFLTVMADEALAKAKEIDNRIANG 62 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPIGIKD T+GI T S +L+ F P Y +TV +KL + AV++GK NMD Sbjct: 63 EKLGALAGIPIGIKDNICTEGIKTTCASRMLEDFVPPYNATVVKKLLEEDAVIIGKTNMD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +P R + PGGSSGGS+A VA +C S+G+DTGGSIR Sbjct: 123 EFAMGSSTENSAFKKTANP-RDLSRV----PGGSSGGSAAVVAADMCPVSLGSDTGGSIR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYG SR G+++F SLDQ G ++ V DSA +L IAG D D+T Sbjct: 178 QPASFCGVVGLKPTYGLVSRFGLVAFGSSLDQIGPFSQNVEDSAYMLNIIAGTDLYDSTS 237 Query: 246 V-NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + L DY +L ++GM +GIP+E+ + L I + ++ I LK+ GA++ SL Sbjct: 238 IRELKHIDYTESLKDGVKGMKIGIPEEFFGEGLDEEIKEAVKKSIEILKENGAEVEMFSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 P + L AYYI+S AEAS+NL+RYDGVRYG R E D + E+ E +R+ GFGQEVK RI Sbjct: 298 PIMKDGLAAYYIMSSAEASTNLSRYDGVRYGYRPEKFDSVDELMEKSRTEGFGQEVKRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 MIGTY LSS YD++Y +A K RT +K D +E F++ D+IL P +P F LG E NS Sbjct: 358 MIGTYALSSGYYDAYYNKADKFRTKLKHDLSETFKK-YDLILGPVSPVLPFKLG--EKNS 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D++T+ VN+AG+PAIS+P + ++ +P+G+QL+G EE +F +E+ Sbjct: 415 DPLAMYLADIYTINVNLAGIPAISIPGGVSKEGLPIGIQLMGDMLCEEKIFKAAYSLEQ 473 >gi|330720566|gb|EGG98840.1| Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium IMCC2047] Length = 484 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/471 (43%), Positives = 306/471 (64%), Gaps = 10/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E L + + S+VE+ SY+ I+ +S N++I V A A A+++D++ G+A Sbjct: 6 IAELSQGLANGEFSSVEITQSYLDRIKRLDSNYNSFITVTEDVALAQAKQADEQRAAGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 DL GIPI KD F T+G+ T S ILD F Y++T+ K + GAV +GK NMDEFA Sbjct: 66 SDLTGIPIAQKDLFCTEGVRTTCASKILDNFIAPYDATIVSKFNEAGAVCVGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S YG V +PW + + G ++ ++ G S G+DTGGSIRQPA Sbjct: 126 MGSSNENSAYGAVKNPWDTNAVPGGSSGGSAAAVAARLAPG-----STGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I++A SLDQAG +T D A++L A+AG+D D+T ++ Sbjct: 181 ALCGVTGLKPTYGRVSRWGMIAYASSLDQAGPFAQTAEDCALMLNAMAGFDSKDSTSIDQ 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPDY L+ S+QG+ +G+PKEY D L + + Q IS + GA + E+SLP ++ Sbjct: 241 PVPDYRAELNNSLQGLKIGLPKEYFTDSLDAGVQQVIQNAISEYEKLGATVKEVSLPRSE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 A+PAYY+I+PAEASSNL+R+DGVR+G R + +D++++Y+ +R+ GFG+EVK RI+ GT Sbjct: 301 LAIPAYYVIAPAEASSNLSRFDGVRFGHRCDNPEDLMDLYKRSRAEGFGREVKRRILAGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS YD++YL+A+++R +IK DF A VDV++ PT+PT AF +G++ + SM Sbjct: 361 YALSEGYYDAYYLKAQRLRRMIKNDFMAALND-VDVLMGPTSPTPAFNIGEKSGDPMSM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 D++T++ N+AG+P IS+P + P+GLQ++G F E L + Sbjct: 419 -YLGDIYTISANLAGIPGISIPCGFVNDR-PVGLQIMGNYFEESRLLNAAH 467 >gi|123968447|ref|YP_001009305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. AS9601] gi|166217699|sp|A2BQY7|GATA_PROMS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|123198557|gb|ABM70198.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. AS9601] Length = 482 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/481 (46%), Positives = 317/481 (65%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R + S + S ELV+ + I++ +S++N+YI A A AE+ DK I N Sbjct: 1 MNFNSLRKEITSNNASVKELVNDFFVKIDHKDSKINSYICTTKDNAIAQAEDIDKLIQNN 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI IKD TKG+ T S++L F YEST + KLW +G + LGK N+D Sbjct: 61 EKLPPLAGMPIAIKDNICTKGVATTCASNMLKNFVAPYESTASSKLWSSGGICLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A+VA CAA+IG+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGVTSNPWDI-----NRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G IT TV D+A +L +I+G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILHSISGKDPFDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP+Y L++SI+G+ +GI KE + L+P + ++ G+ + GA+I+E+ Sbjct: 236 LDKPVPNYLTDLNKSIKGLKIGIIKECFEHPGLNPEVKESVLSGVDRFQALGAEIIEVEC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R EG ++++M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRSNEGSNLIDMTSKSRAEGFGDEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+K+RTLI++DF AF++ VDV+LTPT PT+AF G N+ Sbjct: 356 LIGTYALSAGYSDAYYKKAQKVRTLIRKDFDNAFKK-VDVLLTPTCPTTAFLKGDFVNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM +D+ TV N+AGLPAIS+P K +P+GLQLIG E+ + + I E + Sbjct: 415 LSM--YLSDLLTVPANLAGLPAISIPCGFDTKGLPIGLQLIGNVLEEDRILNAANIFEID 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|158520168|ref|YP_001528038.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfococcus oleovorans Hxd3] gi|229485898|sp|A8ZSP8|GATA_DESOH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|158508994|gb|ABW65961.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfococcus oleovorans Hxd3] Length = 486 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/478 (47%), Positives = 311/478 (65%), Gaps = 10/478 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E+R L K+IS+VEL S IE ++ AYI + + A +AA +D R+ +G Sbjct: 6 LTIHEARQLLDKKEISSVELTRSVFDRIERVEPKVGAYITLARESALSAAAAADTRLQSG 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ +KD T G+ T S +L+ F P Y++TV +KL GAV+ GK+NMDE Sbjct: 66 GIAPLTGIPLAVKDLICTTGLRTTCASRMLETFMPPYDATVIEKLKTQGAVITGKVNMDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S G +PW PGGSSGGS+A+VA +C S+G+DTGGSIRQ Sbjct: 126 FAMGSSTEHSALGSTKNPWNL-----ACIPGGSSGGSAASVAADMCLGSLGSDTGGSIRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VGIKPTYGR SR G+++FA SLDQ G++ + V DSA+LL AI+G+D D+T V Sbjct: 181 PASHCGVVGIKPTYGRVSRYGLVAFASSLDQIGVLAKDVTDSALLLSAISGHDPSDSTSV 240 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPDY + ++ + G+T+G+ +EY + L P + T + I +K GA VE+SLP Sbjct: 241 PREVPDYAASCEKGLSGLTIGVCREYINAEGLDPEVADTVNRSIEHMKAQGAACVEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 H QYA+ AYY+I+PAEASSNLARYDGV+YG R E +LEMY TRS GFG+EV+ RI+ Sbjct: 301 HAQYAVAAYYVIAPAEASSNLARYDGVKYGFRDPEADSLLEMYARTRSRGFGKEVQRRII 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTY LSS YD++Y +A ++R+LI DF +AFE DVI++P PT AF LG + + Sbjct: 361 IGTYCLSSGYYDAYYRKASQVRSLIADDFKKAFET-CDVIVSPVAPTPAFELGAKTEDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M +D+FT++ N+AG+P +SVP +P+G+QLI F E L +E+ Sbjct: 420 TM--YLSDIFTLSANLAGVPGMSVPGGFSSTGLPIGVQLIAGHFNEPALVRCAWNLEQ 475 >gi|326390895|ref|ZP_08212446.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter ethanolicus JW 200] gi|325993043|gb|EGD51484.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter ethanolicus JW 200] Length = 488 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/481 (46%), Positives = 325/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A + + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALVTITEDFALQKAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + G ++LGK Sbjct: 62 IKKGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTFYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG E +D+++MY TRS GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAEKYEDLIDMYMVTRSEGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIIGPTSPTVAFKIGERAN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAFE 472 Query: 482 K 482 + Sbjct: 473 Q 473 >gi|218901511|ref|YP_002449345.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus AH820] gi|228925564|ref|ZP_04088653.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|226709587|sp|B7JMB2|GATA_BACC0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|218536496|gb|ACK88894.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus AH820] gi|228834042|gb|EEM79590.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 485 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|229042203|ref|ZP_04189957.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH676] gi|228727138|gb|EEL78341.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH676] Length = 485 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKVADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|17228548|ref|NP_485096.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nostoc sp. PCC 7120] gi|23821613|sp|Q8YY02|GATA_ANASP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|17130399|dbj|BAB73010.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Nostoc sp. PCC 7120] Length = 486 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/484 (46%), Positives = 319/484 (65%), Gaps = 13/484 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E ++L K+ SAVE+ + I+ ++++++ + AQ+A A D +I G+ Sbjct: 3 SIRELHEQLVKKERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIG+KD TKGI T S IL+ F P YESTVTQKL D GAV++GK N+DE Sbjct: 63 EIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVPPYESTVTQKLLDAGAVVVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW SSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQVTANPWDLSRVPGG-----SSGGSAAAVAAEECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G ++V D+AILLKAIAGYD D+T + Sbjct: 178 PASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAGYDHQDSTSL 237 Query: 247 NLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + +PDY +L ++ + +GI KE + L +++ + I L+ GA++ IS Sbjct: 238 KVEIPDYVASLKPDLKARSKLRIGIIKETFGEGLDSVVEQAVTKAIEQLQRLGAEVHVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 P+ +Y +P+YYII+P+EAS+NLARYDGV+YG R EG ++L MY+ TR+ GFG EVK R Sbjct: 298 CPNFRYGVPSYYIIAPSEASANLARYDGVKYGWRAPEGDNLLSMYKRTRATGFGAEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK+DF AF + VDV+++PT PT+AF G++ + Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKVRTLIKQDFENAF-KNVDVLVSPTAPTTAFKAGEKTAD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM ND+ T+ VN+AGLP +SVP E+ +P+GLQLIG+ RE+ L + E+ Sbjct: 417 PISM--YLNDLMTIPVNLAGLPGLSVPCGFDEQGLPIGLQLIGKVLREDQLLQIAYAYEQ 474 Query: 483 EAGY 486 + Sbjct: 475 STSW 478 >gi|229028162|ref|ZP_04184303.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH1271] gi|229171154|ref|ZP_04298748.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus MM3] gi|228612332|gb|EEK69560.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus MM3] gi|228733110|gb|EEL83951.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH1271] Length = 485 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL V +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTVTIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|309791182|ref|ZP_07685714.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Oscillochloris trichoides DG6] gi|308226744|gb|EFO80440.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Oscillochloris trichoides DG6] Length = 485 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/482 (46%), Positives = 320/482 (66%), Gaps = 9/482 (1%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ + ++ +R L + +++++ L ++ + IE + + A++ V A+ A A A +D Sbjct: 1 MTDLSSLTITSARAALDAGELTSLALTEALLARIEQTEPSVKAFLTVTAELAIAQARAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 L GIP+ IKD AT+G+ T S IL+ F P Y +TV ++L GAVMLG Sbjct: 61 ATRGAATHSPLHGIPLAIKDVIATEGVRTTCSSRILENFAPPYNATVMERLNAAGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMGSS E+S Y +PW PGGSSGGS+AAVA ++GTDT Sbjct: 121 KLNCDEFAMGSSTESSAYQTTGNPWDLAR-----VPGGSSGGSAAAVAAGQALGTLGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ G G+KPTYGR SR G+I++ SLDQ G + TV D A++L+ +AG+D Sbjct: 176 GGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADVALMLQVLAGHDP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T NLPVPDY AL ++G+ VG+P EY ++ + P +++ + I L+D GA+IV Sbjct: 236 RDGTSANLPVPDYSAALTGDLRGLRVGVPSEYFVEGMEPGVEQATRTAIEVLRDLGAEIV 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +SLP+T+YALP YYII+PAEAS+NLAR+DGVRYG R G+ + + E TR FG EV+ Sbjct: 296 PVSLPYTKYALPTYYIIAPAEASANLARFDGVRYGPREPGESMWDQIELTRGHRFGAEVR 355 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++Y RA+++RTLIKRDF +AF Q VD+I PT+P+ AFP+G++ Sbjct: 356 RRIMLGTYALSAGYYDAYYKRAQQVRTLIKRDFEQAFTQ-VDIIAAPTSPSVAFPIGQKT 414 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M +DV T+ +N+AG+P + VP E +P+GLQLIG+PF E TL G Sbjct: 415 DDPLAM--YLSDVCTLPINLAGVPGLVVPCGFSE-NLPVGLQLIGRPFDEATLLRAGDAY 471 Query: 481 EK 482 ++ Sbjct: 472 QR 473 >gi|302879994|ref|YP_003848558.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Gallionella capsiferriformans ES-2] gi|302582783|gb|ADL56794.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Gallionella capsiferriformans ES-2] Length = 482 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 9/464 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR+K IS+VEL SY+ I N NAY+ V + + A A +D+ + G A+ L GIP Sbjct: 13 LRAKKISSVELTQSYLDRIATHNPVYNAYLTVDNKISLAQAAAADQLLATGAAQALTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F KG T S +L F Y++ V ++ GAV LGK NMDEFAMGSSNET Sbjct: 73 IAQKDIFCAKGWRTTCGSKMLADFIAPYDAHVIEQFNRAGAVNLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+GPV +PW K PGGSSGG+++AVA LCAA+ GTDTGGSIRQPA+ G G Sbjct: 133 SYFGPVRNPWNP-----KAVPGGSSGGAASAVAARLCAAATGTDTGGSIRQPAALCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+I+FA SLDQAG + R+ D A++L + G+DE D+T + DY R Sbjct: 188 IKPTYGTVSRYGMIAFASSLDQAGPMARSAEDCALMLNVMTGFDERDSTSLQRDKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ + G+ +G+PKE+ + LS + Q+ I+ + GA IV ISLP+T+ A+P YY Sbjct: 248 DLNKPLAGLRIGLPKEFFAEGLSADVGARVQEAIAEYRKLGATIVGISLPNTRLAVPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+R+DGVRYG R E D+ +MYE +RS GFG+EVK RIMIGTYVLS Sbjct: 308 VLAPAEASSNLSRFDGVRYGYRAPEYTDLTDMYEKSRSQGFGEEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LI +DFT+AF+Q DVI+ PT+P++AF LG++ ++ M +D++ Sbjct: 368 YDAYYLQAQKIRRLIAQDFTDAFQQ-CDVIMGPTSPSTAFNLGEKGDDPVQM--YLSDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+AVN+AGLP +S+P MP+GLQ+IG F E + +V Sbjct: 425 TIAVNLAGLPGMSIPCGFGTNNMPVGLQIIGNYFDEARMLNVAH 468 >gi|302392790|ref|YP_003828610.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acetohalobium arabaticum DSM 5501] gi|302204867|gb|ADL13545.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acetohalobium arabaticum DSM 5501] Length = 485 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 313/482 (64%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E +RL + ++SA E+V+S Q I+ + +YI + +A A+E D+++ NG Sbjct: 6 LTAHELNERLIAGEVSAQEIVESVYQRIDEVEDDVQSYITLTKDEALKQAKEVDEKLANG 65 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD TKG+ T S+IL F P Y +TV KL + VM GK N+D Sbjct: 66 EEVNSLAGIPVAIKDNMCTKGVKTTCASNILHNFEPPYNATVVDKLNEVDTVMTGKTNLD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW +D + PGGSSGGS+AAVA S+G+DTGGSIR Sbjct: 126 EFAMGSSTENSGFFTTKNPW-DLD----YVPGGSSGGSAAAVAAGEAVISLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYG SR G+++FA SLDQ G +R V D A+ L + G+D D+T Sbjct: 181 QPASLCGVVGMKPTYGFVSRYGLVAFASSLDQIGPFSRDVTDCALALNCLCGHDPQDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V VPD+ +L + M +G+PKEY + + +++ Q I L++ GA E+SLP Sbjct: 241 VEREVPDFTESLVDDVSDMKIGVPKEYFGEGIDGEVEEAVQSAIDKLEELGATCEEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIM 364 HT+YALPAYY+I+PAEASSNLARYDGVRYG R E D +++M++ TRS GFG EV+ RIM Sbjct: 301 HTEYALPAYYLIAPAEASSNLARYDGVRYGYRNEEADGLVDMFKLTRSEGFGDEVQRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LSS YD++YL+A+K+RTLIK+DF EAF DV+++PT+PT+AF +G++ ++ Sbjct: 361 LGTYALSSGYYDAYYLKAQKVRTLIKQDFEEAFAD-YDVLISPTSPTTAFKIGEKSDDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ T+ N+AGLP +S+P +P+GLQ++G F EE L V E+ Sbjct: 420 QM--YMSDLCTIPANLAGLPGVSIPCGFDSAGLPIGLQILGDHFAEEKLIQVAYTFEQNT 477 Query: 485 GY 486 + Sbjct: 478 DF 479 >gi|222094078|ref|YP_002528135.1| aspartyl/glutamyl-tRNA amidotransferase subunit a [Bacillus cereus Q1] gi|254790379|sp|B9J1N0|GATA_BACCQ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|221238133|gb|ACM10843.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Q1] Length = 485 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|124023284|ref|YP_001017591.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. MIT 9303] gi|166217697|sp|A2CA16|GATA_PROM3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|123963570|gb|ABM78326.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. MIT 9303] Length = 486 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/487 (46%), Positives = 319/487 (65%), Gaps = 11/487 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 MA++E R +L+ ++SA EL+D + I + ++A+++V A++ARA A+ D+ + G Sbjct: 1 MAIAEWRQQLKLGEVSARELIDHQLARIAVVDPTLHAFLDVTAERARADADRIDEALAAG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++ L G+P+ IKD TKGI T S +L+ F P YESTVT++LW GAV+LGK N+D Sbjct: 61 ESLPPLAGVPLAIKDNLCTKGIRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+AAVA C A++G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGATSNPWDI-----SRVPGGSSGGSAAAVAAGECMAALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G T V D+A LL+ IAG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N+ VPDY AL Q + G+ +G+ +E + + L + T + L+ GA++VE+S Sbjct: 236 LNVAVPDYCSALSQPMSGVRIGLIRECFDQNGLDAQVKSTVLEAAEKLQSLGAELVEVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R EG D L M +R+ GFG EV+ RI Sbjct: 296 PRFSDGIATYYVIAPSEASANLARYDGVKYGYRAEGADALAAMTARSRAEGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI++DF AF Q VDV+LTPT+PT+AF +G ++ Sbjct: 356 LIGTYALSAGYMDAYYKKAQQVRTLIRQDFDAAF-QTVDVLLTPTSPTTAFQVGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ N+AGLPAIS+P + +P+G+QLI E L V E+ Sbjct: 415 LAM--YLADLLTIPANLAGLPAISLPCGFDDDGLPIGVQLIANVLEESRLLQVAFHYEQS 472 Query: 484 AGYFRPH 490 A H Sbjct: 473 ANVMTNH 479 >gi|228963401|ref|ZP_04124562.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar sotto str. T04001] gi|228796295|gb|EEM43742.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar sotto str. T04001] Length = 490 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|312794120|ref|YP_004027043.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181260|gb|ADQ41430.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor kristjanssonii 177R1B] Length = 486 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 218/482 (45%), Positives = 317/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ + ++ K++ E+V+S ++ I+ ++ +YI + ++A A++ D++I G Sbjct: 5 LTAHEAIELIKKKEVKCQEVVESVLERIKQVEDKVKSYITITEEQALENAKKIDEKIAKG 64 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EQVGSLYGLPIALKDNLCTDGIKTTCASKILYNFVPPYDATVVKKLKENNMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTRNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA+ E S+P Sbjct: 240 APIEVPDFTKALKNDVKGLKIGVPREYMEKGVNDEVKKAVEKALELLKSLGAQYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYDDLIDLYKKTRSEGFGAEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF Q DVI+TPT+PT+AF +G+ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAF-QKYDVIITPTSPTTAFKIGERVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P K +P+GLQ+IG+ F E+T+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSKGLPIGLQIIGKAFDEQTILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|295697351|ref|YP_003590589.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus tusciae DSM 2912] gi|295412953|gb|ADG07445.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus tusciae DSM 2912] Length = 494 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 222/478 (46%), Positives = 313/478 (65%), Gaps = 10/478 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V E D++R +++ EL ++ + I ++ ++ A++ + + A E D+ G Sbjct: 7 SVREMADKVRRREVKPSELAEAVLGRIRETDDRVRAFLHIDEDRVLEKAREMDEAAAAGR 66 Query: 68 ARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P +KD T+G+ T S IL + P Y +T +KL D AV++GK NMDE Sbjct: 67 GEGLLFGVPGAVKDNLCTEGVRTTCASKILANYVPPYTATAVRKLEDARAVIVGKTNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 127 FAMGSSTENSAFQQTANPWDL-----GRVPGGSSGGSAAAVAAGQVPFALGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G IT TV D+A +L+AIAG+D D+T Sbjct: 182 PAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITLTVEDAAAVLQAIAGHDPLDSTSA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + VPD+ AL ++GM + +P+EY + P + ++ + L GA++ E+SLPH Sbjct: 242 PVEVPDFSGALTGDVKGMRLAVPREYIGEGTDPGVAAAVKRAVDALAGLGAEVEEVSLPH 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T+YA+ YY+I+PAEASSNLARYDGVRYG+RVEG ++++MY TRS GFG EVK RIM+G Sbjct: 302 TKYAVATYYLIAPAEASSNLARYDGVRYGVRVEGDNLIDMYRRTRSEGFGPEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LSS YD++YLRA+K+RTLI+RDF FE+ D ++ PTTPT AF G++ ++ +M Sbjct: 362 TYALSSGYYDAYYLRAQKVRTLIRRDFDAVFER-FDAVVAPTTPTVAFRFGEKVSDPLTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ND+ T+ VN+AGLPA+SVP L + MP+GLQ+IG+ F E + V E+ A Sbjct: 421 --YLNDILTIPVNLAGLPAVSVPCGLVD-GMPVGLQVIGKAFDEAAVLRVAHAYEQAA 475 >gi|229015701|ref|ZP_04172683.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH1273] gi|229021894|ref|ZP_04178462.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH1272] gi|228739413|gb|EEL89841.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH1272] gi|228745558|gb|EEL95578.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus AH1273] Length = 485 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRISDVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL V +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTVTIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAIS+P MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISIPCGFGANNMPLGLQIIGKHFDESTIYRVAHAFEQATDY 478 >gi|229095023|ref|ZP_04226019.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-29] gi|229101124|ref|ZP_04231890.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-28] gi|229113976|ref|ZP_04243402.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock1-3] gi|228669435|gb|EEL24851.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock1-3] gi|228682252|gb|EEL36363.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-28] gi|228688353|gb|EEL42235.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock3-29] Length = 485 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL V +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTVTIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANSMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|75760018|ref|ZP_00740084.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218235435|ref|YP_002365149.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus B4264] gi|218895427|ref|YP_002443838.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus G9842] gi|228899036|ref|ZP_04063309.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis IBL 4222] gi|228919241|ref|ZP_04082611.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228950862|ref|ZP_04112985.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068061|ref|ZP_04201369.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus F65185] gi|229077665|ref|ZP_04210295.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock4-2] gi|229159457|ref|ZP_04287475.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus R309803] gi|229188576|ref|ZP_04315615.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC 10876] gi|226709588|sp|B7IUX9|GATA_BACC2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226709589|sp|B7H4W2|GATA_BACC4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|74492504|gb|EAO55654.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218163392|gb|ACK63384.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus B4264] gi|218543329|gb|ACK95723.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus G9842] gi|228594765|gb|EEK52545.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC 10876] gi|228624028|gb|EEK80836.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus R309803] gi|228705606|gb|EEL57962.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus Rock4-2] gi|228715069|gb|EEL66936.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus F65185] gi|228808791|gb|EEM55287.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228840348|gb|EEM85619.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228860611|gb|EEN04998.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis IBL 4222] Length = 485 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|15896230|ref|NP_349579.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium acetobutylicum ATCC 824] gi|39931620|sp|Q97EX8|GATA2_CLOAB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A 2; Short=Glu-ADT subunit A 2 gi|15026032|gb|AAK80919.1|AE007794_11 Glutamyl-tRNAGln amidotransferase subunit A [Clostridium acetobutylicum ATCC 824] gi|325510385|gb|ADZ22021.1| Glutamyl-tRNAGln amidotransferase subunit A [Clostridium acetobutylicum EA 2018] Length = 478 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/484 (46%), Positives = 309/484 (63%), Gaps = 11/484 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ M V + R+ + K + + ++V +Y I+ + ++NAYI + A A++ DK+ Sbjct: 2 EILDMTVEQLRNAILDKHLKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAKDVDKK 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I NGD L GIPI IKD T GI T S +L F P Y++TV +KL A+++GK Sbjct: 62 IANGDKVGRLAGIPIAIKDNICTDGIKTTCASKMLYDFVPPYDATVIKKLKAEDAIIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 +NMDEFAMGSS E S + +P D T PGGSSGGS+A VA + S+G+DTG Sbjct: 122 VNMDEFAMGSSTENSAFKITKNPR---DITR--VPGGSSGGSAAVVAAKMAPISLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G+I+FA SLDQ G + +TV+D A LL+ I+G DE Sbjct: 177 GSIRQPAAFCGVVGLKPTYGLVSRFGLIAFASSLDQIGPLGKTVKDCAELLEVISGEDEL 236 Query: 242 DATCVNL-PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T DY +D I+GM +G+PKE+ D L P I K I LK GA++ Sbjct: 237 DNTSSKKHEKEDYLEGIDDGIKGMKIGMPKEFLNDGLDPEIRKCIDDTIEKLKSLGAEVC 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLP T+ L AYYIIS AEASSNLAR+DG+RYG R + +D+ ++ E +RS FG EV Sbjct: 297 EMSLPITEEGLSAYYIISSAEASSNLARFDGIRYGYRPDDFEDVYDLMETSRSEAFGDEV 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTY LSS YD++Y RA K++ IK +F EAFE D+IL+P +P F +G Sbjct: 357 KRRIMLGTYALSSGYYDAYYKRALKLKKKIKNEFKEAFEN-YDLILSPVSPVLPFKIG-- 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + + D++TV +N+AG+PAIS+P ++ ++ +P+GLQL+G F E+ +F + Sbjct: 414 EKKADPLQMYLADIYTVNINLAGIPAISLPCSVSKEGLPIGLQLLGPHFGEKKIFRAARA 473 Query: 480 IEKE 483 +EKE Sbjct: 474 LEKE 477 >gi|239825856|ref|YP_002948480.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Geobacillus sp. WCH70] gi|259647218|sp|C5D4K6|GATA_GEOSW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|239806149|gb|ACS23214.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus sp. WCH70] Length = 486 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/483 (46%), Positives = 321/483 (66%), Gaps = 12/483 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN--G 66 +SE L+ K+IS +LVD + I Q+ A++ + + ARA A+E D ++ Sbjct: 8 ISELHTLLQKKEISVSDLVDESFRRIGEVEEQVQAFLTLNEENARAKAKELDDKLAKEGN 67 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D L G+PIGIKD TKG+ T S IL F P Y++TV ++L + GA+ +GKLNMDE Sbjct: 68 DFGVLFGMPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVMERLNEAGAITIGKLNMDE 127 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 128 FAMGSSTENSGFQLTRNPWDL-----ERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQ 182 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+ IAG D D+T Sbjct: 183 PAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQVIAGLDPMDSTSA 242 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ VP+Y AL I+G+ + +PKEY + ++ + ++ + L+ GA E+SLPH Sbjct: 243 NVEVPNYVEALTGDIKGLKIAVPKEYLGEGVAEEVRQSVLDALKVLEKLGATWEEVSLPH 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL YY+++ +EAS+NLAR+DGVRYG R + K++++MY+ TRS GFG EVK RIM+ Sbjct: 303 SKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKQTRSEGFGNEVKRRIML 362 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LS+ YD++Y +A+++RTLIK+DF + FE+ DVI+ PTTPT AF +G++ ++ + Sbjct: 363 GTFALSAGYYDAYYKKAQQVRTLIKQDFEKVFEK-YDVIIGPTTPTPAFKIGEKTHDPLT 421 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ T+ VN+AG+P ISVP +P+GLQ+IG+ F E T++ V E+ Sbjct: 422 M--YANDILTIPVNLAGVPGISVPCGFV-NGLPVGLQIIGKHFDESTIYRVAHAFEQATD 478 Query: 486 YFR 488 Y + Sbjct: 479 YHK 481 >gi|228989484|ref|ZP_04149469.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus pseudomycoides DSM 12442] gi|228770209|gb|EEM18788.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus pseudomycoides DSM 12442] Length = 485 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 316/480 (65%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D D T N Sbjct: 182 AAYCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAISGVDRMDTTSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY+IS +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLISSSEASANLSRFDGVRYGVRSDNVSNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|75909951|ref|YP_324247.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Anabaena variabilis ATCC 29413] gi|109829568|sp|Q3M6N4|GATA_ANAVT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|75703676|gb|ABA23352.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Anabaena variabilis ATCC 29413] Length = 486 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/484 (46%), Positives = 319/484 (65%), Gaps = 13/484 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E ++L K+ SAVE+ + I+ ++++++ + AQ+A A D +I G+ Sbjct: 3 SIRELHEQLVKKERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIG+KD TKGI T S IL+ F P YESTVTQKL D GAV++GK N+DE Sbjct: 63 EIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVPPYESTVTQKLLDAGAVVVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW SSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQVTANPWDLSRVPGG-----SSGGSAAAVAAEECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G ++V D+AILLKAIAGYD D+T + Sbjct: 178 PASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + +PDY +L ++ + +G+ KE + L +++ + I L+ GA+I IS Sbjct: 238 KVEIPDYVASLKPDLKARGKLRIGVIKETFGEGLDSVVEQAVTKAIEQLQRLGAEIHVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 P+ +Y +P+YYII+P+EAS+NLARYDGV+YG R EG ++L MY+ TR+ GFG EVK R Sbjct: 298 CPNFRYGVPSYYIIAPSEASANLARYDGVKYGWRAPEGDNLLSMYKRTRATGFGAEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK+DF AF + VDV+++PT PT+AF G++ + Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKVRTLIKQDFENAF-KNVDVLVSPTAPTTAFKAGEKTAD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM ND+ T+ VN+AGLP +S+P E+ +P+GLQLIG+ RE+ L V E+ Sbjct: 417 PISM--YLNDLMTIPVNLAGLPGLSLPCGFDEQGLPIGLQLIGKVLREDQLLQVAYAYEQ 474 Query: 483 EAGY 486 + Sbjct: 475 STSW 478 >gi|312134644|ref|YP_004001982.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caldicellulosiruptor owensensis OL] gi|311774695|gb|ADQ04182.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor owensensis OL] Length = 486 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 219/482 (45%), Positives = 318/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ + ++ K++ E+V+S ++ I+ ++ +YI + ++A A++ D++I G Sbjct: 5 LTAHEAIELIKRKEVKCQEVVESVLERIKQVEDKVKSYITITEEQALENAKKIDEKIAKG 64 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EDVGALYGLPIALKDNLCTDGIRTTCASKILYNFVPPYDATVVKKLKENHMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTKNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA+ E S+P Sbjct: 240 APIEVPDFTKALINDVKGLKIGVPREYMEKGVNDEVKKAIEKALELLKSLGAQYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYDDLIDLYKKTRSEGFGAEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF Q DVI+TPT+PT+AF +G++ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAF-QKYDVIITPTSPTTAFKIGEKVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P + +P+GLQ+IG+ F EET+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGVDSNNLPIGLQIIGKAFDEETIIRVAYTFEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|120608995|ref|YP_968673.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidovorax citrulli AAC00-1] gi|120587459|gb|ABM30899.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acidovorax citrulli AAC00-1] Length = 499 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 308/487 (63%), Gaps = 11/487 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L+ + V+E LR K ISAVE ++ I+ ++ + A++ V + A A D Sbjct: 6 SSLHTLGVAELAAALRGKRISAVEAARHFLARIQQ-HTDLGAFVSVNEEATLARARVQDA 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G A L G+PI KD F T+ + A S +L G++ +++TV +L D GAV LGK Sbjct: 65 AIAAGTAGPLAGVPIAHKDIFVTRDFPSTAGSKMLAGYQSPFDATVVTRLADAGAVTLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPV----ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LN DEFAMGS+NE S P+ +P R+ +TD+ PGGSSGGS+ AVA L A G Sbjct: 125 LNCDEFAMGSANENSAVAPLGADAPAPVRNPWATDR-VPGGSSGGSAVAVAARLAPAVTG 183 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL AI G Sbjct: 184 TDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAICG 243 Query: 238 YD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + D+T +++P D+ L SI G+ +GIP E+ + L+P + + + G Sbjct: 244 PDPDRDSTSLDVPAEDFSAKLGDSIDGLRIGIPAEFFGEGLAPDVRAAVDGALKEYEKLG 303 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGF 355 AK+V I+LP T+ ++P YYII+PAEASSNL+R+DGV++G R D+++MY+ TR+ GF Sbjct: 304 AKLVPITLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRARDYTDLVDMYKKTRAEGF 363 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIMIGTYVLS YD++YL+A+KIR +I DF AF D+I P PT A+ Sbjct: 364 GDEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIADDFQNAFRD-CDLIAGPVAPTVAWK 422 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG+ N+ + D+FT+ ++AGLP +SVPA E MP+GLQLIG F+E L + Sbjct: 423 LGEHGND--PLADYLADIFTLPASLAGLPGMSVPAGFGEGGMPVGLQLIGNYFQESRLLN 480 Query: 476 VGQIIEK 482 +++ Sbjct: 481 AAHRLQQ 487 >gi|312876334|ref|ZP_07736319.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor lactoaceticus 6A] gi|311796828|gb|EFR13172.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor lactoaceticus 6A] Length = 486 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 218/482 (45%), Positives = 317/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ + ++ K++ E+V+S ++ I+ ++ +YI + ++A A++ D++I G Sbjct: 5 LTAHEAIELIKKKEVKCQEVVESVLERIKEVEDKVKSYITITEEQALENAKKIDEKIAKG 64 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EQVGSLYGLPIALKDNLCTDGIKTTCASKILYNFVPPYDATVVKKLKENNMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTRNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA+ E S+P Sbjct: 240 APIDVPDFTKALKNDVKGLKIGVPREYMEKGVNDEVKKAVEKALELLKSLGAQYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYDDLIDLYKKTRSEGFGAEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF Q DVI+TPT+PT+AF +G+ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAF-QKYDVIITPTSPTTAFKIGERVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P K +P+GLQ+IG+ F E+T+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSKGLPIGLQIIGKAFDEQTILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|312622942|ref|YP_004024555.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caldicellulosiruptor kronotskyensis 2002] gi|312203409|gb|ADQ46736.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 486 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 219/482 (45%), Positives = 317/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ + ++ K++ E+V+S ++ I+ ++ +YI + Q+A A++ D++I+ G Sbjct: 5 LTAHEAIELIKKKEVKCQEVVESVLERIKQVEDKVKSYITITEQEALENAKKIDEKIVKG 64 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EDVGVLYGLPIALKDNLCTNGIKTTCASKILYNFVPPYDATVVKKLKENDMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTRNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA E S+P Sbjct: 240 APIDVPDFTKALVNDVKGLKIGVPREYMEKGVNDEVKKAVEKALELLKSLGADYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + +D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYEDLIDLYKKTRSEGFGAEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF Q DVI+TPT+PT+AF +G+ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAF-QKYDVIITPTSPTTAFKIGERVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P +P+GLQ+IG+ F E+T+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSNGLPIGLQIIGKAFDEQTILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|57233937|ref|YP_182046.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides ethenogenes 195] gi|109829686|sp|Q3Z6V3|GATA_DEHE1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|57224385|gb|AAW39442.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides ethenogenes 195] Length = 486 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/483 (43%), Positives = 307/483 (63%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +++S L+ + +S+ EL +++ IE ++ A++ V + A A A+ +D Sbjct: 1 MTDLIKLTIAQSHKLLKERKLSSAELTRAHLDRIEKLEPEIKAFMTVCPESALAQAKAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I G R L GIP+ +KD TKGI T S +L+ F P Y + V KL + GAV+LG Sbjct: 61 EAIKQGHIRPLTGIPMALKDVLCTKGIRTTCSSRMLENFVPPYNAHVVDKLAEEGAVLLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S + +PW + PGGSSGGS+A VA S+G+DT Sbjct: 121 KTNMDEFAMGSSTENSAFFTTHNPWNTAK-----VPGGSSGGSAACVAASEAVFSLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G+KP+YG SR G+++FA SLDQ G T+ V D A+++ AIAG+D+ Sbjct: 176 GGSIRQPASFCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKDVLDCALVMNAIAGFDD 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI- 299 D+T V PD+ LD I+G +G+PKEY + I + + L GA + Sbjct: 236 RDSTSVPQTAPDFSSCLDGDIKGFKLGVPKEYFSHNMRADIAEKINDALGVLSGLGASVD 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E+SLPHT YAL YYI++P+EAS+NL+RYDGV+YG + +++ E E TR+ GFG E Sbjct: 296 REVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGPE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD+ Y++A+K+RTLI ++F AFE+ D ++TPTTP F +G+ Sbjct: 356 VKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEK-YDALITPTTPNLPFSIGE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M D T+ +N+AGLPAIS+PA + +P+GLQ+IG+PF ++T+ + Sbjct: 415 KLSDPFEM--YMCDTCTIPINIAGLPAISIPAGFVD-GLPVGLQIIGKPFADQTIMRIAH 471 Query: 479 IIE 481 + Sbjct: 472 AFQ 474 >gi|222528767|ref|YP_002572649.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Caldicellulosiruptor bescii DSM 6725] gi|222455614|gb|ACM59876.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor bescii DSM 6725] Length = 486 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 218/482 (45%), Positives = 316/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ D ++ K++ E+V+S ++ I+ ++ +YI + ++A A++ D++I G Sbjct: 5 LTAHEAIDLIKKKEVKCQEVVESVLERIKQVEDKVKSYITITEEQALENAKKIDEKIAKG 64 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EQVGSLYGLPIALKDNLCTDGIKTTCASKILYNFVPPYDATVVKKLKENNMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTRNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA E S+P Sbjct: 240 APIEVPDFTKALVNDVKGLKIGVPREYMEKGINDEVKKAIEKALELLKSLGADYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + +D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYEDLIDLYKKTRSEGFGAEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF Q DVI+TPT+PT+AF +G+ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAF-QKYDVIITPTSPTTAFKIGERVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P +P+GLQ+IG+ F E+T+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSNNLPIGLQIIGKAFDEQTILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|228906081|ref|ZP_04069970.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis IBL 200] gi|228853490|gb|EEM98258.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis IBL 200] Length = 485 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGIDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + ++L++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLLDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKIDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|304317506|ref|YP_003852651.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779008|gb|ADL69567.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 489 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 228/486 (46%), Positives = 325/486 (66%), Gaps = 11/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ + + E D L++K++SAV++ ++Y++ I+ Q++A I + + A AEE+DK Sbjct: 2 ELHKLKIHELHDLLKNKEVSAVDVTEAYLERIKEVEPQVDALICITEEYALKKAEEADKM 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I +G+ DL GIP+ IKD T+ I T S +L+ F P Y +TV +KL + GAVM+GK Sbjct: 62 IQDGNINDLTGIPVIIKDNMCTENIRTTCASKMLEDFVPPYNATVVEKLNNLGAVMVGKA 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+A+VA CA S+G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAASVAADECAFSLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G +T+ V D AI+L AIAG+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPLTKDVTDCAIVLNAIAGHDPKD 236 Query: 243 ATCVN-LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +T V+ + DY+ L + I+GM +G KE+ L + ++ + + +D GA++ E Sbjct: 237 STSVDKMRKKDYKEFLKEDIKGMKIGYAKEFFRQGLDDGVRESIELALKIFEDLGAEVRE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEVK 360 ISLP+ YAL AYYI+S AEASSNLARYDG+RYG + +D+++MY +RS GFG+EVK Sbjct: 297 ISLPYLDYALAAYYIVSSAEASSNLARYDGIRYGHVATNYEDLIDMYMVSRSEGFGKEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y +A K+RTLIK+D+ +AFE VDVI+ PT+PT+AF +G+ Sbjct: 357 RRIMLGTYALSSGYYDAYYNKALKVRTLIKKDYEKAFED-VDVIVGPTSPTTAFKIGERV 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + +M DV+TV VN+AGLP +S+P L +P+GLQ++G+ F E + + Sbjct: 416 EDPLAM--YLADVYTVPVNIAGLPGLSLPCGL-SNDLPVGLQIVGKHFDEGVVLNAAYAF 472 Query: 481 EKEAGY 486 EK + Sbjct: 473 EKACNF 478 >gi|88808430|ref|ZP_01123940.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. WH 7805] gi|88787418|gb|EAR18575.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. WH 7805] Length = 487 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/485 (46%), Positives = 315/485 (64%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 MA++E R +L + ++SA EL D ++ IE ++A++EV A++ARA A+ D+ R Sbjct: 1 MAIAEWRQQLANGEVSARELTDHHLARIEAVEPGIHAFLEVTAERARADADRVDEARAAG 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+ IKD T+G+ T S +L+ F P YESTVT++LW GAV+LGK N+D Sbjct: 61 EDLPRLAGVPLAIKDNLCTRGVRTTCSSRMLEQFVPPYESTVTERLWAAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +GP +PW + PGGSSGGS+AA+A C ASIG+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGPTANPWNP-----DYVPGGSSGGSAAAMAAGECLASIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G + +V D+A LL+ +AG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFSHSVADAAELLQVMAGADPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N PVPDY AL + ++G+ VG+ +E + + L P + + L+ GA +V++S Sbjct: 236 LNAPVPDYCAALGRPVEGLKVGLVRECFEQEGLDPQVKASVLAAAQQLQALGADLVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRAEDAASLAAMTARSRAEGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF Q VDV+LTPT P +AF G ++ Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAF-QSVDVLLTPTAPGTAFKNGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +D+ T+ N+AGLPAIS+P +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLSDLLTIPANLAGLPAISLPCGFDNGGLPIGVQLIGNVLEEPRLLQVAHQYEQA 472 Query: 484 AGYFR 488 A + Sbjct: 473 ADVMK 477 >gi|52144930|ref|YP_081901.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus E33L] gi|81689697|sp|Q63GR0|GATA_BACCZ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|51978399|gb|AAU19949.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus E33L] Length = 485 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|256752855|ref|ZP_05493694.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter ethanolicus CCSD1] gi|256748257|gb|EEU61322.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacter ethanolicus CCSD1] Length = 488 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 222/481 (46%), Positives = 324/481 (67%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E R+ L+ +++SA+E+ SY++ I+ +++A + + A A+E+D++ Sbjct: 2 ELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALVTITEDFALQKAKEADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ IKD +T+GI T S +L+ + P Y +TV +KL + G ++LGK Sbjct: 62 IKKGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKS 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW PGGSSGGS+AA+A A ++G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----SRVPGGSSGGSAAAIAADEAAFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L I G+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + PDY L + I+G+ +G+ KE+ + + + +T Q+ I L+D GA+I++I Sbjct: 237 STSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 S+P+ +YALPAYYII+ AEASSNLARYDG+RYG E +D+++MY TR GFG+EVK Sbjct: 297 SIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAEKYEDLIDMYMVTRREGFGKEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++Y +A K+RTLIK DF +AFE+ DVI+ PT+PT AF +G+ N Sbjct: 357 RIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEK-CDVIIGPTSPTVAFKIGERAN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M D++TV+VN+AGLP IS+P L + +P+GLQ+IG+ F E + +V E Sbjct: 416 DPLAM--YLADIYTVSVNIAGLPGISIPCGLSD-GLPVGLQIIGRHFDEGKILNVAYAFE 472 Query: 482 K 482 + Sbjct: 473 Q 473 >gi|30260491|ref|NP_842868.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. Ames] gi|49183334|ref|YP_026586.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. Sterne] gi|50196912|ref|YP_052607.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. 'Ames Ancestor'] gi|65317743|ref|ZP_00390702.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Bacillus anthracis str. A2012] gi|165871382|ref|ZP_02216030.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0488] gi|167634172|ref|ZP_02392494.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0442] gi|167640150|ref|ZP_02398417.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0193] gi|170688389|ref|ZP_02879598.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0465] gi|170708753|ref|ZP_02899190.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0389] gi|177653678|ref|ZP_02935817.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0174] gi|190567331|ref|ZP_03020245.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis Tsiankovskii-I] gi|190567577|ref|ZP_03020490.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis Tsiankovskii-I] gi|227812986|ref|YP_002812995.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. CDC 684] gi|228913048|ref|ZP_04076687.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228944116|ref|ZP_04106495.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229119967|ref|ZP_04249222.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus 95/8201] gi|229604414|ref|YP_002864936.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0248] gi|254686704|ref|ZP_05150562.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. CNEVA-9066] gi|254724779|ref|ZP_05186562.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. A1055] gi|254739071|ref|ZP_05196773.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. Western North America USA6153] gi|254742307|ref|ZP_05199993.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. Kruger B] gi|254756083|ref|ZP_05208112.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. Vollum] gi|254761900|ref|ZP_05213749.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus anthracis str. Australia 94] gi|39931472|sp|Q81ZE8|GATA_BACAN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790376|sp|C3PBQ4|GATA_BACAA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790377|sp|C3L559|GATA_BACAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|30253859|gb|AAP24354.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. Ames] gi|49177261|gb|AAT52637.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. Sterne] gi|50082974|gb|AAT70115.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|164712866|gb|EDR18395.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0488] gi|167511961|gb|EDR87340.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0193] gi|167530486|gb|EDR93201.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0442] gi|170126332|gb|EDS95222.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0389] gi|170667721|gb|EDT18475.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0465] gi|172081258|gb|EDT66333.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0174] gi|190561364|gb|EDV15336.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis Tsiankovskii-I] gi|190561458|gb|EDV15429.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis Tsiankovskii-I] gi|227003175|gb|ACP12918.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. CDC 684] gi|228663433|gb|EEL19018.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus 95/8201] gi|228815505|gb|EEM61747.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228846453|gb|EEM91466.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268822|gb|ACQ50459.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus anthracis str. A0248] Length = 485 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/476 (46%), Positives = 316/476 (66%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQ 474 >gi|325688129|gb|EGD30148.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK72] Length = 488 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKERETAVDSFITVSEEEALAQATALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEEVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|123966262|ref|YP_001011343.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. MIT 9515] gi|166217698|sp|A2BWS5|GATA_PROM5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|123200628|gb|ABM72236.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. MIT 9515] Length = 484 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/485 (46%), Positives = 319/485 (65%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R ++S + S EL++ + I++ + ++NAY + + A + +E+ DK I N Sbjct: 1 MNFNSFRKEIKSGNASVKELINEFFLKIDSLDPKINAYTCLTKEIANSQSEQIDKLISNN 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD TKG+ T S +L F YESTV+ KLW +G + LGK N+D Sbjct: 61 EQLPPLAGIPIAIKDNICTKGVVTSCSSKMLQDFVSPYESTVSGKLWSSGGIFLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW + K PGGSSGGS+A+VA LCAASIG+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGTTSNPWDT-----KRVPGGSSGGSAASVAAGLCAASIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+I+FA SLDQ G IT TV D+A +L +++G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLIAFASSLDQIGPITNTVSDAAEILYSMSGKDPLDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP+Y LD+SI+G+ +GI +E + L + + + LK GA+I ++ Sbjct: 236 LDKPVPNYLSDLDKSIKGLKIGIIEECFNHPGLDQEVKLSVLSAVDRLKSLGAEIHDVKC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P EAS+NLARYDGV+YG R +G +++EM +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPCEASANLARYDGVKYGYRSDGDTNLVEMISKSRAEGFGNEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI++DF AF++ VDV+LTPT PT+AF G N+ Sbjct: 356 LIGTYALSAGYSDAYYKKAQRVRTLIRKDFDSAFDK-VDVLLTPTCPTTAFLKGDFINDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM +D+ TV N+AGLPAIS+P +K +P+GLQLIG E + +V I EK+ Sbjct: 415 LSM--YLSDLLTVPANLAGLPAISIPCGFDKKGLPIGLQLIGNVLEEHRILNVANIFEKD 472 Query: 484 AGYFR 488 A + Sbjct: 473 ADVMK 477 >gi|299820614|ref|ZP_07052504.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria grayi DSM 20601] gi|299818109|gb|EFI85343.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria grayi DSM 20601] Length = 483 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 228/483 (47%), Positives = 320/483 (66%), Gaps = 13/483 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E D+L +K+I+A +LV + IE ++ A++E+ ++A + AEE D D Sbjct: 7 SIKELHDKLVNKEITAYDLVKASYDRIEEVEDKVGAFLELNKEQALSVAEELDDA--GFD 64 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A+ L G+PIGIKD TK + T A S +L+ F P Y++TV KL + +GKLNMDE Sbjct: 65 AKHILSGLPIGIKDNIVTKNLRTTAASKMLENFDPIYDATVVSKLKQAETINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETS++ +PW + DK PGGSSGGS+AAVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSHFHKTRNPW----NLDK-VPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G ITRTV D+A LL+AIAG DE D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITRTVEDNAYLLEAIAGVDENDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N P+ Y L I+G+ +G+PKEY D + P + K + + L++ GA E+SLPH Sbjct: 240 NEPITKYTDHLTGDIKGLKIGVPKEYFGDGIEPGVKKAVMEALKKLEELGAVWEEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNLAR+DGVRYG R ++ E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLARFDGVRYGYRTPNAANLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DFT+ F DVI+ PT PT+AF + ++ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKKDFTDVFAD-YDVIIGPTAPTTAFDIDGMIHDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ T+ +N++G+PAISVP + +P+GLQ+IG F E T++ V E+ Sbjct: 419 M--YLNDLLTIPINLSGVPAISVPCGFSD-GLPVGLQIIGNYFDEATIYKVAHAFEQSTS 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|331270351|ref|YP_004396843.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum BKT015925] gi|329126901|gb|AEB76846.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium botulinum BKT015925] Length = 485 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/477 (46%), Positives = 324/477 (67%), Gaps = 11/477 (2%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLE 72 D ++ K+I E+V SY+ I+N + ++ AY+ + +KA A++ D +I G D ++L Sbjct: 13 DMIKDKEIKVEEVVQSYLNRIDNIDEKVGAYLYLSKEKALEQAKKLDDKIKRGEDIKNLC 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPIG+KD + K + S IL+ + Y++TV KL +N +++GKLNMDEFAMGSS Sbjct: 73 GIPIGVKDNISVKNMQNTCASKILENYISPYDATVISKLKENQGIIIGKLNMDEFAMGSS 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 NE S + V +PW + PGGSSGGS+AAVA ++GT+TGGS+RQPAS G Sbjct: 133 NENSAFKVVKNPWDL-----ERIPGGSSGGSAAAVASGEIPLALGTETGGSVRQPASLCG 187 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ SFA +LDQ G + R V D AIL +AI+G+D D+T +N VP+ Sbjct: 188 VVGLKPTYGRISRYGVTSFASTLDQVGTMGRDVTDCAILTEAISGFDHRDSTSLNKYVPN 247 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++ +L + I+G + IPKE+ + L + K+ ++ I L++ GA+I+E SLP Y+L Sbjct: 248 FKESLKRDIKGKKIAIPKEFFEENLDYGVRKSIEEAIGVLRENGAEIIECSLPLMDYSLA 307 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYIIS AEASSNLAR DG+RYG R+E K+ +++Y +R+ GFG+EVK RIM+GTYVLS Sbjct: 308 AYYIISSAEASSNLARIDGIRYGKRIEKVKNDIDIYIQSRNEGFGKEVKRRIMLGTYVLS 367 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 Y+ +Y +A K+R+LIK DF E + DVI+TPT+PT+AFP+G++ N+ SM + Sbjct: 368 KGYYEEYYEKALKVRSLIKNDF-EKILKTCDVIITPTSPTTAFPIGQKTNDILSMYS--S 424 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D++TV +N+AGLPA+SVP +P+GLQ+IG FRE+ LF++G E+ + + Sbjct: 425 DIYTVPINIAGLPAMSVPCGFS-NNLPVGLQIIGNYFREDMLFNIGYSYEQSTNWHK 480 >gi|257083652|ref|ZP_05578013.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis Fly1] gi|256991682|gb|EEU78984.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis Fly1] Length = 489 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/487 (46%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+N+ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQNTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|257080990|ref|ZP_05575351.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis E1Sol] gi|256989020|gb|EEU76322.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis E1Sol] Length = 489 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/487 (46%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 NN +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INNPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|254468013|ref|ZP_05081419.1| glutamyl-tRNA(Gln) amidotransferase subunit A [beta proteobacterium KB13] gi|207086823|gb|EDZ64106.1| glutamyl-tRNA(Gln) amidotransferase subunit A [beta proteobacterium KB13] Length = 484 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/470 (47%), Positives = 310/470 (65%), Gaps = 10/470 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E L SK S+ EL ++ I+ N ++NA+I + +K+ A ++DKRI Sbjct: 4 LSLKELNLGLSSKKFSSEELTRFFLNEIKTFNPKINAFITLDEEKSLQQARDADKRISQD 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + +L GIPI KD F KG T S +LD F Y+S V + +GAV LGK NMDE Sbjct: 64 NMNELTGIPIAQKDIFCAKGWKTTCGSKMLDNFYSPYDSKVIELFNQSGAVNLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNETSYYG V +PW ++D + PGGSSGGS+AAVA + A+ TDTGGSIRQ Sbjct: 124 FAMGSSNETSYYGKVRNPW-NLD----YVPGGSSGGSAAAVASGMAPAATATDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G G+KPTYG SR G+I+FA SLDQAG I ++ D A++LK +A +D D+T + Sbjct: 179 PASLCGLTGLKPTYGLVSRFGMIAFASSLDQAGPIAKSAEDCALMLKVMAAHDTRDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +PDY ++LD I+G T+G+PKE+ D L+ + +Q I + G EISL + Sbjct: 239 KQNIPDYLKSLDNPIKGKTIGLPKEFFNDDLNQEVKIVLEQVIDSYQKMGVNFKEISLSN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 + ++P YY+I+PAEASSNL+RYDGV++G R E KD+ EMY TR GFG+EVK RI++ Sbjct: 299 SHLSIPVYYVIAPAEASSNLSRYDGVKFGYRAKEFKDLEEMYLKTREQGFGEEVKRRILV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLS+ YD++YL+A+KIR LI DF AF++ D+IL P+ P++AF +G + + S Sbjct: 359 GTYVLSAGYYDAYYLKAQKIRRLIADDFKNAFKE-CDLILAPSCPSTAFKIGDKTEDPVS 417 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 M D++T++ N+AGLPAIS PA KMP+G QLIG F E T+ + Sbjct: 418 M--YMQDMYTISTNLAGLPAISSPAGFIN-KMPVGFQLIGNYFDEATILN 464 >gi|33240200|ref|NP_875142.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931407|sp|Q7VCJ0|GATA_PROMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33237727|gb|AAP99794.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 486 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/481 (46%), Positives = 322/481 (66%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 M++++ R +L ++S++EL++ I IE + +++Y+ + +KARA+A + D+ R Sbjct: 1 MSIAKWRQKLNKGEVSSLELINQQINRIEEVENTLHSYLYLNHEKARASAIKIDEARAAG 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P IKD TKGI T S +L+ F P YESTVTQ+LW G ++LGK N+D Sbjct: 61 EELPPLAGVPFAIKDNLCTKGIPTTCSSKMLEEFIPPYESTVTQRLWKAGGILLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +GP +PW D T PGGSSGGS+AAVA LC A++G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGPTKNPW---DITR--VPGGSSGGSAAAVASGLCTAALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+I+FA SLDQ G + V D+A +L+ IAG+D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLIAFASSLDQVGPFSTNVSDAAEILQVIAGHDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +++PVP Y + +SI G+ +G+ KE + + L + K+ + L+ GA+++E+S Sbjct: 236 LDVPVPKYSDHISESISGLRIGLIKECFDQEGLDLEVKKSVLKAADQLQSLGAELIEVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R + D L +M TR+ GFG EV+ RI Sbjct: 296 PRFTDGIATYYVIAPSEASANLARYDGVKYGYRAKEVDNLSDMTAFTRARGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF + VD++LTPT+PT+AF G +N+ Sbjct: 356 LIGTYALSAGYVDAYYRKAQQVRTLIRRDFENAF-KNVDILLTPTSPTTAFKSGAHQNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +D+ T+ N+AGLP+IS+P EK +P+GLQLI E L V E+ Sbjct: 415 LAM--YLSDLLTIPANLAGLPSISLPCGFDEKALPIGLQLIANVLDETRLLQVAHQYEQA 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|146281399|ref|YP_001171552.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas stutzeri A1501] gi|145569604|gb|ABP78710.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas stutzeri A1501] Length = 488 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/478 (47%), Positives = 316/478 (66%), Gaps = 10/478 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + ++ + ++E L K SA EL + + IE + Q+N++I V + A A A+ +D Sbjct: 4 TAMHNLTLAEIARNLAEKRFSAEELTRTLLARIEQLDPQLNSFISVTDELAIAQAKAADA 63 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R G+ L G PIG KD F T+GI T S ILD F+ Y++TV ++L G V LGK Sbjct: 64 RRAAGENGALLGAPIGHKDLFCTQGIRTSCGSKILDSFKAPYDATVVERLAAAGTVTLGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGS+NE+SYYGPV +PW PGGSSGGS+AA+A L A+ GTDTG Sbjct: 124 LNMDEFAMGSANESSYYGPVKNPWDL-----SRVPGGSSGGSAAAIAARLLPAATGTDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T G+KPTYGR SR G++++A SLDQ G + RT D A+LL A+AG+D Sbjct: 179 GSIRQPAALTNLTGLKPTYGRVSRWGMVAYASSLDQGGPMARTAEDCALLLSAMAGFDPK 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V P+ DY AL Q + G+ +G+PKEY L P I + LK GA + + Sbjct: 239 DSTSVEQPLDDYLAALSQPLAGLRIGLPKEYFGAGLDPKIADAVMASVEELKKLGATVKD 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVK 360 ISLP+ Q+A+P+YY+I+PAEASSNL+R+DGVR+G R E D+ ++Y+ +R+ GFG EVK Sbjct: 299 ISLPNMQHAIPSYYVIAPAEASSNLSRFDGVRFGYRCENPVDLTDLYKRSRAEGFGDEVK 358 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A+KIR LIK+DF AFEQ VD+IL PTTP A+ LG E Sbjct: 359 RRIMVGTYALSAGYYDAYYLKAQKIRRLIKQDFVAAFEQ-VDLILGPTTPNLAWKLG--E 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N+ + D++T+ N+AG+P +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 KNADPVSAYLEDIYTITANLAGIPGLSMPAGFID-GLPVGVQLLAPYFQEARLLNVAH 472 >gi|251795125|ref|YP_003009856.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Paenibacillus sp. JDR-2] gi|247542751|gb|ACS99769.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Paenibacillus sp. JDR-2] Length = 486 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 322/488 (65%), Gaps = 13/488 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + + +L +K+++ +LVD+ + I ++ + A++ + + AR A+ DK+++ G Sbjct: 6 LRLQDVHSKLNNKELTVSDLVDASYRRIAETDETIKAFLTLNEENARRQADSLDKQLLEG 65 Query: 67 DARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L G+P G+KD T+G+ T S L + P Y++T KL +V +GKLNMD Sbjct: 66 GERGLLFGLPSGVKDNIVTEGLLTTCASQFLSNYNPIYDATTVSKLKSAQSVTIGKLNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG SNE S Y P +PW ++ PGGSSGGS+A+VA S+G+DTGGSIR Sbjct: 126 EFAMGGSNENSSYYPTRNPWNP-----EYVPGGSSGGSAASVAAGQVYFSLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA++ G VG+KPTYG SR G+++FA SLDQ G +T+ V DSA +L+AIAGYDE D+T Sbjct: 181 QPAAYCGIVGLKPTYGLVSRFGLVAFASSLDQIGPLTKNVEDSAYVLQAIAGYDEKDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 N+ +PDY AL ++G+ +G+P+EY + + P + + Q + + GA E+SLP Sbjct: 241 ANVDIPDYTSALTGDVKGLRIGVPREYLGEGIDPKVKEAVMQALKTFESMGATWEEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT+YA+ YY+++ +EASSNLAR+DGVRYG+R + ++++++Y +RS GFG EVK RIM Sbjct: 301 HTEYAIATYYLLASSEASSNLARFDGVRYGVRADNPENLIDLYRKSRSQGFGPEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LSS YD++YL+A+K+RTLIK+DF F Q D+I+ PT PT+AF +G++ + Sbjct: 361 LGTYALSSGYYDAYYLKAQKVRTLIKQDFDNVFNQ-YDIIIGPTAPTTAFKIGEQVGDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +M ND+ T+ V++AG+PAISVP + MP+GLQ+IG+ F E T+ E++ Sbjct: 420 TM--YLNDICTIPVSLAGIPAISVPCGTAD-GMPIGLQIIGKAFDESTVLRAAHAFEQQT 476 Query: 485 GY--FRPH 490 + RP Sbjct: 477 EFHKLRPQ 484 >gi|315649451|ref|ZP_07902537.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Paenibacillus vortex V453] gi|315275139|gb|EFU38511.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Paenibacillus vortex V453] Length = 485 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 215/482 (44%), Positives = 317/482 (65%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E ++L++K++S +LVD I + ++ A+I + + AR++A+ D ++ GD Sbjct: 8 LTEIHNKLQNKELSVTDLVDQAFTRISETEDRVKAFITLDEEGARSSAKVLDDKLAAGDT 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L G+P+GIKD T+G+ T S L F P Y++TV KL + V +GKLNMDEF Sbjct: 68 RGLLFGLPVGIKDNIVTEGLRTTCASQFLSNFTPVYDATVVGKLRASDTVTIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG SNE S + PV +PW ++D + GGS+ +A A F ++G+DTGGSIRQP Sbjct: 128 AMGGSNENSSFYPVRNPW-NLDRVPGGSSGGSAAAVAAGEAYF----ALGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYG SR G+++FA SLDQ G +T+ V DSA +L+AIAGYD+ D+T Sbjct: 183 ASYCGVVGLKPTYGLVSRFGLVAFASSLDQIGPLTKNVEDSAYVLQAIAGYDQMDSTSAK 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPDY AL I G+ + +PKEY + + + +T + L+ GA E+SLPHT Sbjct: 243 VDVPDYLSALSGDIAGLRIAVPKEYLGEGVDAEVKETVLNALKALEALGATWDEVSLPHT 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIG 366 YA+ YY+++ +EASSNLAR+DGVRYG+R + ++++Y +RS GFG EVK RIM+G Sbjct: 303 DYAVATYYLLASSEASSNLARFDGVRYGVRSDNAGSLIDLYHESRSQGFGDEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LSS YD++YL+A+K RTLIK+DF + FEQ DVI+ PT PT+AF LG + ++ +M Sbjct: 363 TYALSSGYYDAYYLKAQKARTLIKQDFDKVFEQ-YDVIIGPTAPTTAFKLGTQVDDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ V++AG+PA+SVP + +P+G+Q+IG+ F E T+ V E+ + Sbjct: 422 --YLNDILTIPVSLAGVPAVSVPCGFAD-GLPVGMQIIGKAFDESTVLRVAHAYEQNTEH 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|241889700|ref|ZP_04776998.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemella haemolysans ATCC 10379] gi|241863322|gb|EER67706.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemella haemolysans ATCC 10379] Length = 485 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 217/471 (46%), Positives = 306/471 (64%), Gaps = 13/471 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 +L++K+I +LV + I+ ++ ++ ++I V + A AE D G L G Sbjct: 14 KLKNKEIKPSDLVKESLDRIKATDDKVGSFITVTEEVALKQAEALDCAQEEGRVEGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD TK I T S IL+GF P Y++TV KL ++LGKLNMDEFAMG S Sbjct: 74 IPMGIKDNIVTKDIQTTCASKILEGFNPIYDATVMNKLNKENPILLGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSYY +P +D+ PGGSSGGS+ AVA + ++G+DTGGS+RQPAS+ G Sbjct: 134 ETSYYKLTRNP-HDLDAV----PGGSSGGSATAVAAGQVSFTLGSDTGGSVRQPASYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TRTV+D+A +L+ I+G D D T + VP++ Sbjct: 189 VGLKPTYGRVSRFGLVAFASSLDQIGPMTRTVKDNARVLEIISGLDANDMTSAPVEVPEF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G + +PKEY + + + +G+ +L+ GA + E+SLP+T YA+ Sbjct: 249 SKIITGDIKGKKIALPKEYFGAGIDEEVKQAVLEGVKYLESQGAIVEEVSLPNTDYAIST 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEASSNL+R+DG+RYG R ++ E+Y+ TR GFG EVK RIM+GTYVLSS Sbjct: 309 YYIIASAEASSNLSRFDGIRYGYRSPNATNLEEIYKKTRGEGFGAEVKRRIMLGTYVLSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-N 431 YD++Y +A+++RTLIK+DF FE+ DVI+ PT PT AF +G+E G IY N Sbjct: 369 GYYDAYYKKAQQVRTLIKQDFDRVFEE-YDVIIGPTAPTVAFNIGEE---VGDPIKIYAN 424 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ T+ VNMAGLP IS+P + P+G+Q+I +PF E TL+ V E+ Sbjct: 425 DILTIPVNMAGLPGISIPCGF-KGNRPIGMQIIAKPFAESTLYDVAYNFEQ 474 >gi|225018627|ref|ZP_03707819.1| hypothetical protein CLOSTMETH_02577 [Clostridium methylpentosum DSM 5476] gi|224948621|gb|EEG29830.1| hypothetical protein CLOSTMETH_02577 [Clostridium methylpentosum DSM 5476] Length = 487 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/487 (48%), Positives = 313/487 (64%), Gaps = 10/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ +E D+L +K+ SA E+ S I + ++ AY + ++A A A+ D++ Sbjct: 2 ELYQLSAAELHDKLVNKECSAAEITTSVFDRIRAVDGKVKAYNTLCEEQALAQAKAVDQK 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G+A L GIPIG+KD TKG+ T S +L+ F P Y +TV +K +GAV+ GK Sbjct: 62 IADGEAISPLAGIPIGVKDNICTKGVRTTCASKMLENFVPPYNATVMEKFEASGAVLTGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS ETSY +P ++D PGGSSGGS+AAVA C A++G+DTG Sbjct: 122 LNMDEFAMGSSTETSYLNQTANP-HNLDCV----PGGSSGGSAAAVAAGECVAALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYG SR G+++FA SLDQ G + RTVRD A L I G D Sbjct: 177 GSIRQPASFCGIVGLKPTYGSVSRYGLVAFASSLDQIGPMGRTVRDVAALYSVICGQDNR 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT P++ LD +++G+ V +PKEY + + P + ++ L+ GA + E Sbjct: 237 DATSEYRSYPNFADNLDSNLKGLKVALPKEYFGEGIDPAVKQSVLDAAKLLEQNGATLTE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVK 360 ISLP T+YAL AYYIIS AEASSNLAR+DGV+YG R D +++MYE TRS GFG EVK Sbjct: 297 ISLPGTEYALNAYYIISSAEASSNLARFDGVKYGYRTPEYDGLIDMYEKTRSEGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GT+VLSS YD++Y RA+ ++ I +F ++F++ DVILTPT PT+AF G E Sbjct: 357 RRIMLGTFVLSSGYYDAYYKRAKLLQRQITSEFAQSFQE-YDVILTPTVPTTAFKFG--E 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N S + D+ TV VN+AGLP +SVP MP+G+QLIG F E+ L V Sbjct: 414 NTSDPLKMYAGDICTVTVNIAGLPGLSVPCGKDADGMPIGVQLIGNHFSEQKLLGVAHSY 473 Query: 481 EKEAGYF 487 E+ G F Sbjct: 474 EQLVGGF 480 >gi|228995678|ref|ZP_04155341.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus mycoides Rock3-17] gi|229003307|ref|ZP_04161137.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus mycoides Rock1-4] gi|228757925|gb|EEM07140.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus mycoides Rock1-4] gi|228764055|gb|EEM12939.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus mycoides Rock3-17] Length = 485 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/480 (46%), Positives = 316/480 (65%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D D T N Sbjct: 182 AAYCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAISGVDRMDTTSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY+IS +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLISSSEASANLSRFDGVRYGVRSDNVSNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|312128132|ref|YP_003993006.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caldicellulosiruptor hydrothermalis 108] gi|311778151|gb|ADQ07637.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor hydrothermalis 108] Length = 486 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 313/482 (64%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ D ++ K++ E+V S + IE ++ AYI + ++A A++ D++I G Sbjct: 5 LTAHEAIDLIKKKEVKCQEVVQSVLDRIEQVEDKVKAYITITKEEALEDAKKIDEKIAKG 64 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EDVGVLYGLPIALKDNLCTNGIKTTCASKILYNFVPPYDATVVKKLKENDMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTKNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA E S+P Sbjct: 240 APVDVPDFTKALVNDVKGLKIGVPREYMEKGINDEVKKAVEKALELLKSLGADYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYDDLIDLYKKTRSEGFGPEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF Q DVI+TPT+PT+AF +G+ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAF-QKYDVIITPTSPTTAFKIGERVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P +P+GLQ+IG+ F E+T+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSNGLPIGLQIIGKAFDEQTILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|220931081|ref|YP_002507989.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halothermothrix orenii H 168] gi|254790393|sp|B8D125|GATA_HALOH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219992391|gb|ACL68994.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halothermothrix orenii H 168] Length = 477 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 231/483 (47%), Positives = 316/483 (65%), Gaps = 21/483 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDK 61 EL + + E RD LR +++S E++DS+ + I+ ++ AY+ + +AR + A D Sbjct: 2 ELYDLTIHELRDLLRKEEVSPEEVLDSFYKRIDEVEDKVKAYVTLTRDEARNSLASLKDG 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R L GIP+ IKD +T+GI T S IL+ ++P Y++TV ++L + G + LGK Sbjct: 62 R--------LAGIPLAIKDNISTRGIKTTCSSKILNNYKPPYDATVVKRLKEEGGITLGK 113 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + P +PW ++D GSSGGS+AAVA ++G+DTG Sbjct: 114 TNMDEFAMGSSTENSGFYPTHNPW-NLDHAPG----GSSGGSAAAVAAGEAPGALGSDTG 168 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G+++FA SLDQ G IT+ V DSA+LL I+G+D Sbjct: 169 GSIRQPAAFCGVVGLKPTYGCVSRYGLVAFASSLDQIGPITKDVTDSALLLNVISGHDPM 228 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V+ DY L ++GM +G+P+EY LD+ S DK + L+ AGA + Sbjct: 229 DSTSVDREKEDYTTYLKDDVKGMKIGLPEEYFSLDFNSEVKDKVM-SAVKELEKAGAIVE 287 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 E+SLP+ +YAL AYYII+PAEASSNLARYDGVRYG R E G + M+ NTRS GFG EV Sbjct: 288 EVSLPNIEYALAAYYIIAPAEASSNLARYDGVRYGYRSENGDSVRSMFTNTRSEGFGDEV 347 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTYVLSS YD+ YL+A+K+RTLIK DF F+ DV+++PTTPT+AF LG+ Sbjct: 348 KRRIMLGTYVLSSGYYDAFYLKAQKVRTLIKEDFERVFKD-YDVLISPTTPTTAFKLGE- 405 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + +DVFTV VN+AG+PAISVP +P+GLQ++G F E + Sbjct: 406 --MTDPLEMYQSDVFTVPVNIAGIPAISVPCGFDSNNLPIGLQIMGPHFGEGKILQTAYT 463 Query: 480 IEK 482 +E+ Sbjct: 464 LEQ 466 >gi|315172189|gb|EFU16206.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX1346] Length = 489 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/487 (46%), Positives = 317/487 (65%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ V Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKVAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|88608215|ref|YP_506149.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neorickettsia sennetsu str. Miyayama] gi|109891960|sp|Q2GEE7|GATA_NEOSM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|88600384|gb|ABD45852.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neorickettsia sennetsu str. Miyayama] Length = 482 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/485 (47%), Positives = 316/485 (65%), Gaps = 12/485 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++V++ L ++IS++ELV++++ I N+ NA I V ++AR A+ +D Sbjct: 1 MNDLIKLSVAKMHLALARREISSLELVEAHLLQIRERNAHTNALILVTEEEARQRAKLAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R+ G++ + L GIP IKD + TKG+ T A S L F P YESTVT KL D GAVML Sbjct: 61 ERLKRGESVNTLTGIPCVIKDMYCTKGVRTTAASRALRNFVPTYESTVTSKLIDAGAVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSSN +S++GPV +P + D PGGSSGGS+AAVA + S+G+D Sbjct: 121 GKANMDEFAMGSSNTSSFFGPVKNPLKGKKGVD-LVPGGSSGGSAAAVADYYSPFSLGSD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF G VG++PTYGRCSR G+I A SLDQAGI++R V D+A + + I+GYD Sbjct: 180 TGGSVRQPASFCGLVGLRPTYGRCSRWGMIPLANSLDQAGILSRNVEDNAAVFEVISGYD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+TC L Y + D I+ + VGIP+E ++ LS I K W+ + L+ GA+I Sbjct: 240 RKDSTCAKLEPFKYNKNPD--IRHIKVGIPQECKVSGLSSHIVKLWESTANILRQLGAEI 297 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG--LRVEGKDILEMYENTRSIGFGQ 357 +++SLP +Y+L YYII AEASS LARYDG+RY + I E+YE RS+ FG+ Sbjct: 298 IDVSLPCVEYSLMVYYIICSAEASSQLARYDGIRYSPDPSISASTISELYEKYRSVSFGR 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL- 416 EVK R+ +GT+VLSS Y +Y A++++ I +++ FE+ VDVIL PT P AFP+ Sbjct: 358 EVKRRLFMGTHVLSSSGYADYYAAAKELQEEIVNEYSAVFEK-VDVILNPTAPNDAFPID 416 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 GK E + ND+FTV ++A LP IS+P L E MPLG+ L F EE L +V Sbjct: 417 GKLE----PLEMYMNDIFTVPTSVAKLPCISIPVGLSEDDMPLGMHLTANYFAEELLLNV 472 Query: 477 GQIIE 481 ++ Sbjct: 473 ALALQ 477 >gi|262375781|ref|ZP_06069013.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter lwoffii SH145] gi|262309384|gb|EEY90515.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter lwoffii SH145] Length = 492 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/479 (45%), Positives = 320/479 (66%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L + S+ EL Y++ IE ++Q+ AY+ V A++A A A+ +D Sbjct: 1 MTDLHRLSIRELTEGLANAQFSSRELTQHYLKRIEKIDAQVKAYVTVTAEQALAQADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+A L G+PI KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AAIKAGNATALTGVPIAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKGKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY+G +PW ++D PGGSSGGS+A VA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYFGSTKNPW-ALD----HVPGGSSGGSAAVVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQ G + R+ D A L+ +AG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ V DY L+ S++G+ +GIPK+Y ++ L + ++ + L++ GA Sbjct: 236 KDSTSMDKEVDDYVANLNATSVKGLRIGIPKQYFNVEGLDADVKARVEESLKKLEEMGAI 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRAENPVDLMDLYKRSRSEGFGA 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFES-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L SV Sbjct: 415 ADLT---PVEMYLGDIYTLAVNLAGLPAINAPVGFDQNNLPVGLQLIGNYWSESQLLSV 470 >gi|42779431|ref|NP_976678.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus ATCC 10987] gi|206974310|ref|ZP_03235227.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus H3081.97] gi|217957879|ref|YP_002336423.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus AH187] gi|229137146|ref|ZP_04265765.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-ST26] gi|229194694|ref|ZP_04321487.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus m1293] gi|81569972|sp|Q73EK8|GATA_BACC1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226709590|sp|B7HSY0|GATA_BACC7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|42735347|gb|AAS39286.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus ATCC 10987] gi|206747550|gb|EDZ58940.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus H3081.97] gi|217063856|gb|ACJ78106.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus AH187] gi|228588797|gb|EEK46822.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus m1293] gi|228646318|gb|EEL02533.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus BDRD-ST26] gi|324324321|gb|ADY19581.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus thuringiensis serovar finitimus YBT-020] Length = 485 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 316/476 (66%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQ 474 >gi|324993492|gb|EGC25412.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK405] gi|324995198|gb|EGC27110.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK678] gi|327461763|gb|EGF08094.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK1] gi|327489048|gb|EGF20843.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK1058] Length = 488 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAVLDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEEVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGNHFDEATIYQTAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|148242425|ref|YP_001227582.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp. RCC307] gi|166217726|sp|A5GTM0|GATA_SYNR3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|147850735|emb|CAK28229.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Synechococcus sp. RCC307] Length = 485 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/480 (45%), Positives = 312/480 (65%), Gaps = 10/480 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-N 65 M + D LR+ +A E + ++ I + ++ A++ V +ARA AE D+ I Sbjct: 1 MPIGAWSDALRNGSATAKEHSEQALERIAATEPELKAFVNVTGDQARAQAEAVDQAIAAK 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+ IGIKD TKG+ T S +L+ F P YESTVT++LW GAVM+GK N+D Sbjct: 61 QDPGPLAGVTIGIKDNLCTKGVTTTCSSRMLENFVPPYESTVTERLWKAGAVMVGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A VA C ++G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGMTSNPWDP-----GRVPGGSSGGSAACVAAGQCDVALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G +RTV DSA +L+ IAG+D D+T Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPFSRTVADSAAVLQVIAGHDPRDSTS 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++PVPDY AL++ IQG+ +GI +E ++ L P ++ + + L G ++V++S P Sbjct: 236 LDVPVPDYSAALNRPIQGLKIGILQEAFVEGLQPEVEASVRAAAEQLASLGCELVDVSCP 295 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 Q + YY+I+P+EAS+NLARYDGV+YG R + + + M +R+ GFG EV+ RI+ Sbjct: 296 RFQAGIATYYVIAPSEASANLARYDGVKYGYRAADAESLSAMTAKSRAEGFGDEVQRRIL 355 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTY LS+ D++Y +A+++RTLI+++F AFEQ VD++LTPT PT+AF G+ N+ Sbjct: 356 IGTYALSAGYVDAYYKKAQQVRTLIRQEFDRAFEQ-VDLLLTPTAPTTAFTPGEHSNDPL 414 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +M D+ T+ N+AGLPAISVP + +P+GLQL+ +EE L V E+ A Sbjct: 415 AM--YLADLLTIPANLAGLPAISVPCGFDGQGLPIGLQLMAPVLQEERLLQVAHHYEQAA 472 >gi|77457063|ref|YP_346568.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas fluorescens Pf0-1] gi|109891972|sp|Q3KI27|GATA_PSEPF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|77381066|gb|ABA72579.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas fluorescens Pf0-1] Length = 483 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/473 (47%), Positives = 310/473 (65%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++E L K S+ EL + I + Q+N++I + + A A+ +D R NG Sbjct: 4 LTLAEIARGLADKKFSSEELTKVLLARITQLDPQLNSFISLTEELALEQAKAADVRRANG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 ++ L G PI KD F T+GI T S +LD F+ Y++TV KL G V LGK NMDE Sbjct: 64 ESGALLGAPIAHKDLFCTQGIRTSCGSKMLDNFKAPYDATVVSKLAAAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ TDTGGSIRQ Sbjct: 124 FAMGSANESSWYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPAATATDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+FT G+KPTYGR SR G+I++A SLDQ G + RT D AILL+ +AG+D D+T + Sbjct: 179 PAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDPNDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY L+ S+QG+ +G+PKEY L P I Q I L+ GA I EISLP+ Sbjct: 239 DEPVPDYAAGLNGSLQGLRIGVPKEYFGAGLDPRIADLIQNSIKELQKLGAVIKEISLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMI 365 Q+A+PAYY+I+PAEASSNL+R+DGVR+G R + K++ ++Y+ +R GFG EV+ RIM+ Sbjct: 299 MQHAIPAYYVIAPAEASSNLSRFDGVRFGHRCADPKNLEDLYKRSRGEGFGPEVQRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YD++YL+A+KIR L+K DF AF + VD+IL PTTP A+ LG + NS Sbjct: 359 GAYALSAGYYDAYYLKAQKIRRLVKNDFMAAFNE-VDIILGPTTPNPAWKLGAK--NSDP 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 VAAYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|170077646|ref|YP_001734284.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. PCC 7002] gi|229464475|sp|B1XJG8|GATA_SYNP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169885315|gb|ACA99028.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Synechococcus sp. PCC 7002] Length = 485 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/486 (46%), Positives = 324/486 (66%), Gaps = 13/486 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 A+ +L +K+ SAVE++ IE ++ A++ + ++A A A + D +I G+ Sbjct: 3 AIRTLHQQLIAKERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L EGIPI IKD TKGI T S IL+GF P YESTVTQ+L + GA+M+GK N+DE Sbjct: 63 TIGLLEGIPIAIKDNLCTKGIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW D T PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSGYQVTGNPW---DVTR--VPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYG SR G++++A SLDQ G RTV D+AILL+AIAG+D D+T + Sbjct: 178 PASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSL 237 Query: 247 NLPVPDYERALDQSI---QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 ++ +P Y + L + + + +GI +E + L P + + Q+ I+ L++ GA++ IS Sbjct: 238 DVDIPQYSQLLQPELPKDKPLKIGIIQETFGEGLDPEVAEAVQKAIAQLQELGAEVETIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P +Y LPAYYII+P+EAS+NLARYD V+YG R D +++MY TR+ GFG EVK R Sbjct: 298 CPRFRYGLPAYYIIAPSEASANLARYDAVKYGTRNAAADNLVDMYTQTRAAGFGPEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+K+RTLIK+DF +AF + VDV++ PT+P++AF G++ ++ Sbjct: 358 IMLGTYTLSAGYYDAYYLKAQKVRTLIKKDFDQAFAK-VDVLICPTSPSTAFKAGEKTDD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ T+ VN+AGLPA+S+P + +P+G+QLIG RE+ L V + E+ Sbjct: 417 PLSM--YLSDLMTIPVNLAGLPALSLPCGFDAQGLPIGMQLIGNVLREDLLLQVAHVYEQ 474 Query: 483 EAGYFR 488 + + Sbjct: 475 ATAWHQ 480 >gi|304405107|ref|ZP_07386767.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Paenibacillus curdlanolyticus YK9] gi|304345986|gb|EFM11820.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Paenibacillus curdlanolyticus YK9] Length = 485 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 215/484 (44%), Positives = 320/484 (66%), Gaps = 11/484 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + + ++L +K++S EL ++ + I + + A+I + + AR A E DK++ G Sbjct: 6 LRLQDLHNQLNNKELSVAELTEASYKRIAQTEPAVQAFITLNEEGARKQAAELDKQLQEG 65 Query: 67 DARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L G+P GIKD T+G+ T S L + P Y++TVT+KL V +GKLNMD Sbjct: 66 GERGLLFGLPAGIKDNIVTEGLTTTCASQFLRNYDPIYDATVTKKLKAAQTVTIGKLNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG SNE S + +PW + ++ PGGSSGGS+A+VA S+G+DTGGSIR Sbjct: 126 EFAMGGSNENSSFYATRNPWNT-----EYVPGGSSGGSAASVAAGQVYFSLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA++ G VG+KPTYG SR G+++FA SLDQ G +T+ V DSA +L+AIAGYD D+T Sbjct: 181 QPAAYCGIVGLKPTYGLVSRFGLVAFASSLDQIGPLTKNVEDSAYVLQAIAGYDSMDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 N+ +PDY AL ++G+ +G+PKEY + P + + + + GA E+S+P Sbjct: 241 ANVEIPDYTSALTGDVKGLRIGVPKEYLGQGIDPKVKEAVLAALRVYESLGATWEEVSMP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIM 364 HT+YA+ YY+++ +EASSNLAR+DGVRYG+R + D ++++Y +RS GFGQEVK RIM Sbjct: 301 HTEYAVATYYLLASSEASSNLARFDGVRYGVRADNPDNLIDLYRRSRSEGFGQEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LSS YD++YL+A+K+RTLIKRDF +AFE+ DV++ PT PT AF +G++ + Sbjct: 361 LGTYALSSGYYDAYYLKAQKVRTLIKRDFDQAFEK-FDVLIGPTAPTPAFRIGEQVGDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +M ND+ T+ V++AG+PA+S+P L + +P+GLQ+IG+ F E T+ E+ Sbjct: 420 TM--YLNDILTIPVSLAGVPAVSIPCGLAD-GLPVGLQIIGKSFDESTVLRAAHAFEQHT 476 Query: 485 GYFR 488 + + Sbjct: 477 DFHK 480 >gi|192359738|ref|YP_001983278.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cellvibrio japonicus Ueda107] gi|229485865|sp|B3PC08|GATA_CELJU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|190685903|gb|ACE83581.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cellvibrio japonicus Ueda107] Length = 484 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 227/486 (46%), Positives = 313/486 (64%), Gaps = 10/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ ++E LR+KD S+ E+ Y+ I ++ N+YI V A A +DKR+ Sbjct: 1 MHQFTIAELVKGLRNKDFSSTEITQHYLDRIARLDNTYNSYITVTGDVALQQAAAADKRL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G+PI KD F T G+ T S +LD F Y +T+ + G VMLGK N Sbjct: 61 AAGNTSALCGVPIAHKDIFCTAGVRTSCASKMLDKFIAPYNATIVENYLKAGVVMLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETS+YGPV +PW + PGGSSGGS+AAVA L A+ +DTGGS Sbjct: 121 MDEFAMGSSNETSWYGPVKNPWNT-----HCVPGGSSGGSAAAVAAHLAPAATASDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G GIKPTYGR SR G+I+FA SLDQAGI++RT D+A+LL +A YD D+ Sbjct: 176 IRQPAALCGLTGIKPTYGRVSRWGMIAFASSLDQAGILSRTAEDAALLLNDMASYDPKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TC+ VPDY L++ + G+ +G+PKEY + L+P + I + GA I +S Sbjct: 236 TCIERDVPDYTADLNKPLNGLRIGVPKEYFGEGLNPKTAALVEAAIKVYESLGASIHSVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPHT A+PAYY+I+PAE S+NL+R+DGVRYG R E KD++++Y +RS GFG EVK R Sbjct: 296 LPHTHLAVPAYYVIAPAECSANLSRFDGVRYGHRCEDPKDLMDLYMRSRSEGFGAEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ YD++Y +A+K+R LIK+DF +AF VDVIL PT+P+ AF G + + Sbjct: 356 ILVGTYALSAGYYDAYYSKAQKVRRLIKQDFVDAFHH-VDVILGPTSPSPAFEFGSKGKD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D++T+A N+AGLP +S+P L + K P+GLQLIG F E L + ++ Sbjct: 415 PVAM--YLEDIYTIATNLAGLPGLSIPCGLVDDK-PVGLQLIGNFFAEAQLLNAAHQFQQ 471 Query: 483 EAGYFR 488 + + Sbjct: 472 ATDFHQ 477 >gi|317495347|ref|ZP_07953717.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Gemella moribillum M424] gi|316914769|gb|EFV36245.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Gemella moribillum M424] Length = 487 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 215/472 (45%), Positives = 307/472 (65%), Gaps = 13/472 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 +L++K+I +LV + I+ + ++ ++I V + A AE DK +G A L G Sbjct: 14 KLKNKEIKPSDLVKESLDRIKATEEKVGSFITVTEEIALKQAEAMDKLQESGQATGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD TK I T S IL+GF P Y++TV KL +++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIVTKDIQTTCASKILEGFNPIYDATVMNKLNAENPILMGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E SYY +P +D+ PGGSSGGS+ A+A + ++G+DTGGS+RQPAS+ G Sbjct: 134 ENSYYKLTRNP-HDLDAV----PGGSSGGSATAIAAGQVSFTLGSDTGGSVRQPASYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TRTV+D+A +L+ I+G D D T + VP++ Sbjct: 189 VGLKPTYGRVSRFGLVAFASSLDQIGPMTRTVKDNARVLEIISGLDAHDMTSAPVEVPEF 248 Query: 254 ERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + + D ++G + +PKEY + + K G+ +L+ GA + E+SLP+T YA+ Sbjct: 249 SKIITGDIKVKGKKIALPKEYFGAGIDEDVKKAVLDGVKYLESQGAIVEEVSLPNTDYAI 308 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 YYII+ AEASSNL+R+DG+RYG R ++ E+Y+ TR GFG EVK RIM+GTYVL Sbjct: 309 STYYIIASAEASSNLSRFDGIRYGYRSPNATNLEEIYKKTRGEGFGAEVKRRIMLGTYVL 368 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y +A+++RTLIK DF F++ DVI+ PT PT AF +G+E + +M Sbjct: 369 SSGYYDAYYKKAQQVRTLIKEDFDRVFKE-YDVIIGPTAPTVAFNIGEEIGDPVTM--YA 425 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VNMAGLP +S+P K+ P+G+QLI +PF E TL+ V E+ Sbjct: 426 NDILTIPVNMAGLPGLSIPCGFKGKR-PIGMQLIAKPFAESTLYDVAYNFEQ 476 >gi|149923163|ref|ZP_01911577.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Plesiocystis pacifica SIR-1] gi|149816001|gb|EDM75516.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Plesiocystis pacifica SIR-1] Length = 513 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/476 (46%), Positives = 310/476 (65%), Gaps = 23/476 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIINGDARDLEGI 74 +RS + SA EL +Y+ AI + +++Y V A+ A A A+ D +R L G+ Sbjct: 24 VRSGERSARELTQAYLDAIAERDGALHSYRLVDAEGALARADAIDAERSRGATLGPLAGV 83 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD F T + T S +L+G+RP Y + +L D GAV+LGKL MDEFAMGSSNE Sbjct: 84 PVGLKDNFVTADLDTTCGSRMLEGWRPPYAGSHAARLLDAGAVILGKLAMDEFAMGSSNE 143 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + + PV +PW + D+ PGGSSGG+++AVA LCA +G+DTGGSIRQPAS G V Sbjct: 144 NTPFEPVRNPW----ALDR-VPGGSSGGTASAVAAGLCALGLGSDTGGSIRQPASLCGVV 198 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR +R G+I+FA SLDQAG + RTV D+A+ L +AG D DAT + PVPDY Sbjct: 199 GLKPTYGRVTRAGMIAFASSLDQAGPLARTVEDAALGLSVLAGADPRDATSLRAPVPDYL 258 Query: 255 RALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 A+D ++G+ VG+ + + L+ ++ ++ + L + GA++V++ LPH A Sbjct: 259 AAVDAGREGDLKGVKVGVQRSSLGEGLADSVRARFEASLEVLAERGAELVDVELPHFHLA 318 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKD-----ILEMYENTRSIGFGQEVKHRIMI 365 + AYY+++ AEASSNLARYDGVRYG +D ++E+YE TRS FG EVK RI++ Sbjct: 319 VAAYYVVATAEASSNLARYDGVRYGASAAREDSPPSSLVELYERTRSTHFGAEVKRRILL 378 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+VL S Y +Y RA K+RTL+ RD+ AFE+ D+I +PT+P A+ LG++ ++ + Sbjct: 379 GTFVLRSESYADYYGRAMKVRTLLARDYAGAFER-CDLIASPTSPVPAWRLGEKLDDPLA 437 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCE-----KKMPLGLQLIGQPFREETLFSV 476 M +DVFT+ N+AGLPAIS+PA CE ++P+GLQL G+ E TL V Sbjct: 438 M--YLSDVFTIGANLAGLPAISIPAGFCEPCDDCPRLPIGLQLTGRRLDEATLLRV 491 >gi|253680910|ref|ZP_04861713.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Clostridium botulinum D str. 1873] gi|253562759|gb|EES92205.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Clostridium botulinum D str. 1873] Length = 485 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/477 (47%), Positives = 321/477 (67%), Gaps = 11/477 (2%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLE 72 D +R+K+I A E++ SY+ I+ + ++ AY+ + +++ A++ D +I G D + L Sbjct: 13 DMIRNKEIRAEEVMKSYLDRIDTIDKKIGAYLYISKEESLKQAKKLDDKIKRGQDIKGLC 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPIG+KD + K + S IL+ + Y++TV KL N A+++GKLNMDEFAMGSS Sbjct: 73 GIPIGVKDNISVKNMQNTCASKILENYISPYDATVISKLKKNQAIIIGKLNMDEFAMGSS 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 NE S + V +PW K PGGSSGGS+AAVA ++GT+TGGS+RQPA+ G Sbjct: 133 NENSAFKVVKNPWDL-----KRIPGGSSGGSAAAVASCEVPLALGTETGGSVRQPAALCG 187 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ SFA +LDQ G I R VRD AIL + I+G+DE D+T +N VP+ Sbjct: 188 VVGLKPTYGRVSRYGVTSFASTLDQVGTIGRDVRDCAILTEVISGFDERDSTSLNKNVPN 247 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + +L++ I+G + IPKE+ + L + K+ ++ I LK+ GA+I+E SLP Y+L Sbjct: 248 FNESLNKDIRGKKLAIPKEFFQENLEYGVRKSIEEAIKVLKENGAEIIECSLPLIDYSLS 307 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYIIS AEASSNLAR DG+RYG R+E K+ +++Y +RS GFG+EVK RIM+GTYVLS Sbjct: 308 AYYIISSAEASSNLARIDGIRYGKRIEKLKNDIDIYIQSRSKGFGKEVKRRIMLGTYVLS 367 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 Y+ +Y +A K+R+LIK DF + D I+TPT+PT+AF +G++ NN SM + Sbjct: 368 KGYYEDYYEKALKVRSLIKDDFKNIL-KTCDAIITPTSPTTAFEIGEKTNNILSMYS--S 424 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D++TV VN+AGLPAISVP +P+GLQ+IG FRE+ LF++ E+ + + Sbjct: 425 DIYTVPVNIAGLPAISVPCGFSN-NLPVGLQIIGDYFREDMLFNISYSYEQSTNWHK 480 >gi|225848068|ref|YP_002728231.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfurihydrogenibium azorense Az-Fu1] gi|225644210|gb|ACN99260.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Sulfurihydrogenibium azorense Az-Fu1] Length = 485 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 216/469 (46%), Positives = 315/469 (67%), Gaps = 11/469 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-AR 69 E + ++ K+I E+V S+I+ + ++NAYI + + A A+E D+ I D Sbjct: 10 EISNLIKKKEIKPSEVVQSFIERKKQVEPKINAYITDLEELAIKQAKEKDQEITKLDNIP 69 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 DL +PI IKD +TKGI T S IL+ F P Y++TV ++L G ++ GK N+DEFAM Sbjct: 70 DLFAVPIAIKDNISTKGIKTTCASKILENFVPVYDATVIERLNSQGYIITGKTNLDEFAM 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSS E S + +PW + PGGSSGGS+A VA S+G+DTGGSIRQPA+ Sbjct: 130 GSSTENSAFFTTKNPWDL-----ERVPGGSSGGSAAVVAAGAVPLSLGSDTGGSIRQPAA 184 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYGR SR G+++FA SLDQ G +R V D+A+++ I+G D D+T ++P Sbjct: 185 FCGIVGLKPTYGRVSRYGLVAFASSLDQIGPFSRYVEDTALIMNVISGKDSRDSTSKDIP 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +P++ + + ++G+ +G+P+E+ + L+P I + + L+ G + ISLP+++Y Sbjct: 245 LPNFLEEIKKDVKGLKIGLPQEFFTEELNPQIKEIILNAVKQLEKEGMSVEWISLPYSKY 304 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ YYII+P+EASSNLAR+DGVRYG R + KD+ EMY TR GFGQEVK RIM+GTY Sbjct: 305 AIETYYIIAPSEASSNLARFDGVRYGYRTKDYKDLEEMYSKTRDEGFGQEVKRRIMVGTY 364 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS YD++YL+A+K+RTLI +D+ +AFE+ VDVI+TPTTP AF +G++ N+ M Sbjct: 365 ALSSGYYDAYYLKAQKVRTLIYQDYMKAFEK-VDVIITPTTPDVAFKIGEKSNDPIQM-- 421 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +D+FTV++NMA LPA+S+P + +P+G+Q+IG+PF E T+ V Sbjct: 422 YLSDIFTVSINMATLPAVSIPCGFKD-NLPVGMQIIGKPFDESTILKVA 469 >gi|289207517|ref|YP_003459583.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Thioalkalivibrio sp. K90mix] gi|288943148|gb|ADC70847.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thioalkalivibrio sp. K90mix] Length = 483 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 223/470 (47%), Positives = 316/470 (67%), Gaps = 11/470 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++++IS+ EL Y++ IE + Q+N++I V A+ A A A+ +D R+ NG+ L G+ Sbjct: 12 KLQAREISSRELTQLYLERIERLDPQLNSFITVTAESALAQADAADARLANGEQTPLLGV 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ KD F T+G+ T S +LD F Y +TV +++ GAVMLGK NMDEFAMGSSNE Sbjct: 72 PVAQKDIFCTEGVRTSCGSRMLDPFISPYNATVVERMNAAGAVMLGKTNMDEFAMGSSNE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS+YGPV +PW + + PGGSSGGS+AAV L + GTDTGGSIRQPA+F G Sbjct: 132 TSFYGPVRNPWDT-----ERVPGGSSGGSAAAVGARLVPGATGTDTGGSIRQPAAFCGIT 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+FA SLDQ G + T D ++L A+AG+DE D+T V P D+ Sbjct: 187 GLKPTYGRVSRYGMIAFASSLDQGGPMAVTAEDCGLMLNAMAGFDERDSTSVERPAEDFT 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L+Q + G+ +G+PKE+ + L + + LK GA+I E+SLP++ ++PAY Sbjct: 247 AGLNQDLTGLRIGLPKEFFGEGLDEKVRGVIDAAVEVLKGRGAEIREVSLPYSHLSVPAY 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+++PAE SSNLAR+DGVRYG R + +D++++Y +R GFG EVK RIM+GTYVLS+ Sbjct: 307 YVVAPAECSSNLARFDGVRYGHRCDNPEDLMDLYTRSRGEGFGDEVKRRIMVGTYVLSAG 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+K+R +I DF AFE VDV+L PTTP F LG + + + +D+ Sbjct: 367 YYDAYYLKAQKVRRIIADDFRSAFED-VDVLLGPTTPELPFALGAKAD---PVSMYLSDI 422 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +T+A N+AGLPA+S+PA + +P+GLQLIG F E L V ++E Sbjct: 423 YTIAANLAGLPAMSLPAGEID-GLPVGLQLIGNYFDEARLLGVAHQYQQE 471 >gi|171780317|ref|ZP_02921221.1| hypothetical protein STRINF_02105 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281665|gb|EDT47100.1| hypothetical protein STRINF_02105 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 488 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E + L +K+ISAVEL + ++ I+ + ++++I V + A A A+ D++ Sbjct: 3 FNTKSIDELHNLLVNKEISAVELTKATLEDIKEREAAVDSFITVSEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T+GI T A S +L + P +++T +KL+ V++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMVVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYGR SR G+I+F SLDQ G +TV+++A LL IAG+D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFAQTVKENAQLLNVIAGHDAKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + VPD+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSSDREVPDFTGKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYSNLEDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI RDF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+G+QLIG + EET++ E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGFAQ-GLPVGMQLIGPKYSEETIYQAAATFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|146295943|ref|YP_001179714.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409519|gb|ABP66523.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 486 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/482 (45%), Positives = 314/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ D ++ K++ E+V S + IE ++ AYI + ++A A++ D++I G Sbjct: 5 LTAHEAIDLIKKKEVKCQEVVQSVLDRIEQVEDKVKAYITITKEEALENAKKIDEKIAKG 64 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EDVGVLYGLPIALKDNLCTDGIKTTCASKILYNFVPPYDATVVKKLKENDMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTRNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA E S+P Sbjct: 240 APIEVPDFTKALVNDVKGLKIGVPREYMEKGVNDEVKKAVEKALELLKSLGADYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + +D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYEDLIDLYKKTRSEGFGSEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F +AF Q DVI+TPT+PT+AF +G++ N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDQAF-QKYDVIVTPTSPTTAFKIGEKVANPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P +P+GLQ+IG+ F E+T+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSNGLPIGLQIIGKAFDEQTILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|257415295|ref|ZP_05592289.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis AR01/DG] gi|257157123|gb|EEU87083.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis ARO1/DG] Length = 489 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKKDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|302871353|ref|YP_003839989.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor obsidiansis OB47] gi|302574212|gb|ADL42003.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Caldicellulosiruptor obsidiansis OB47] Length = 486 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 217/482 (45%), Positives = 317/482 (65%), Gaps = 10/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E+ + ++ K++ E+V+S + I+ ++ +YI + ++A A++ D++I G Sbjct: 5 LTAHEAIELIKKKEVKCQEVVESVFERIKQVEDKVKSYITITEEQALENAKKIDEKIAKG 64 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI +KD T GI T S IL F P Y++TV +KL +N +LGKLNMD Sbjct: 65 EHVGALYGLPIALKDNLCTDGIRTTCASKILYNFVPPYDATVVKKLKENHMTLLGKLNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 125 EFAMGSSTENSAFHTTKNPWDL-----ERVPGGSSGGSAAAVAADEAFFTLGSDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D A+ + I G+D DAT Sbjct: 180 QPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTKDVEDCALAMNIICGHDPYDATS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPD+ +AL ++G+ +G+P+EY ++ + K ++ + LK GA+ E S+P Sbjct: 240 APIDVPDFTKALKNDVKGLKIGVPREYMEKGVNDEVKKAVEKALELLKSLGAQYEEFSIP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALP YYII+ +EASSNLARYDG++YG R + D++++Y+ TRS GFG EVK RIM Sbjct: 300 IVEYALPTYYIIASSEASSNLARYDGIKYGYRTQNYDDLIDLYKKTRSEGFGAEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y + ++RTLIKR F EAF++ DVI+TPT+PT+AF +G++ +N Sbjct: 360 LGTYALSAGYYDAYYKKGLQVRTLIKRAFDEAFKK-YDVIITPTSPTTAFKIGEKVSNPL 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D+ TV VN+AGLPAIS+P +P+GLQ+IG+ F EET+ V E+ + Sbjct: 419 EM--YMSDICTVPVNIAGLPAISIPCGFDSNNLPIGLQIIGKAFDEETILRVAYTYEQNS 476 Query: 485 GY 486 GY Sbjct: 477 GY 478 >gi|23098220|ref|NP_691686.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Oceanobacillus iheyensis HTE831] gi|39931566|sp|Q8ES78|GATA_OCEIH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|22776445|dbj|BAC12721.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Oceanobacillus iheyensis HTE831] Length = 488 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/476 (46%), Positives = 311/476 (65%), Gaps = 12/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E ++L +K+I+ +LV Q I + +++A++ + +KA A E D+ + Sbjct: 8 IKELEEKLHNKEITVEDLVKESYQRIHEVDQEVHAFLTLDEEKALEKARELDQ--LEDKT 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFR-PHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P GIKD TKG+ T S LD F P Y++TV QKL V +GKLNMDEF Sbjct: 66 GILFGMPGGIKDNIVTKGLRTTCASQFLDNFNDPLYDATVVQKLQKENMVAVGKLNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S Y P +PW + + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 126 AMGSSNENSGYEPTRNPWNT-----EHVPGGSSGGSAAAVAAGEVLFTLGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+++FA SLDQ G +TRTV D+A +L+ IAG+D+ D T N Sbjct: 181 AAFCGVVGMKPTYGRVSRFGLVAFASSLDQIGPVTRTVEDNARVLEVIAGHDQMDTTSAN 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VP Y AL Q ++G+ + +PKEY + +S + + + + GA E+SLPH+ Sbjct: 241 VEVPSYTEALKQDVKGLKIAVPKEYLAEGVSKEVKDAILEALKVYESMGATWEEVSLPHS 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NLAR+DGVRYG+R E D +++M++ +RS GFG+EVK RIM+G Sbjct: 301 KYALATYYLLSSSEASANLARFDGVRYGVRSENADNMIDMFKKSRSEGFGEEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIK DF + E+ DVI+ PTTPT AF +G E S + Sbjct: 361 TFALSSGYYDAYYKKAQKVRTLIKNDFDKILEE-YDVIVGPTTPTPAFKVG--EKTSDPL 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+P IS+P + +P+GLQ+IG F E T++ E+ Sbjct: 418 TMYANDILTIPVNLAGVPGISIPCGFSTEGLPIGLQIIGNYFDESTVYRTAYAYEQ 473 >gi|29375321|ref|NP_814475.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis V583] gi|227554841|ref|ZP_03984888.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis HH22] gi|256761494|ref|ZP_05502074.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T3] gi|257418336|ref|ZP_05595330.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T11] gi|39931501|sp|Q837V3|GATA_ENTFA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|29342781|gb|AAO80545.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis V583] gi|227176010|gb|EEI56982.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis HH22] gi|256682745|gb|EEU22440.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T3] gi|257160164|gb|EEU90124.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T11] gi|315031448|gb|EFT43380.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0017] gi|315166926|gb|EFU10943.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX1341] gi|315575353|gb|EFU87544.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0309B] gi|315581383|gb|EFU93574.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0309A] gi|327534315|gb|AEA93149.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecalis OG1RF] Length = 489 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 227/487 (46%), Positives = 319/487 (65%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + AYYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGIAAYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ++Y D+ TV VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM-YMY-DILTVPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|78485969|ref|YP_391894.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thiomicrospira crunogena XCL-2] gi|109891998|sp|Q31F53|GATA_THICR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78364255|gb|ABB42220.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thiomicrospira crunogena XCL-2] Length = 484 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 215/476 (45%), Positives = 306/476 (64%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ ++V E ++LR+K+I++V L Y+ I+ + ++NAY+ V + A A ++D+ I Sbjct: 1 MHTLSVKEMSEKLRNKEITSVALTQHYLDRIDQYDGELNAYVTVTPELAMEMARQADEMI 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L GIP+ KD F T + T S +LD F Y++ V + G +LGK N Sbjct: 61 AEGKGGLLTGIPVAHKDIFCTLDVKTTCGSKMLDNFIAPYDAKVVEASRALGMPILGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS+E+SYYG +PW K PGGSSGGS+A +A L + G+DTGGS Sbjct: 121 MDEFAMGSSSESSYYGATKNPWDL-----KAVPGGSSGGSAAVIAAGLAPLATGSDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYG SR G+I++A S DQ G +TR+ +SA LL IAG+DE D+ Sbjct: 176 IRQPASFCGITGIKPTYGAVSRYGMIAYASSFDQGGPMTRSAEESAWLLDVIAGFDERDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + P DY L+ I+G+ VG+P EY + L + + I+ L+ GA+IVE+S Sbjct: 236 TSLEQPKQDYVSTLNDDIKGLKVGVPAEYFEEGLDDGVASNIRAAIAELEKLGAEIVEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ A+PAYY+++PAEASSNL+R+DGVRYG R E D+ ++Y +RS GFG EVK R Sbjct: 296 LPNKDLAVPAYYVLAPAEASSNLSRFDGVRYGYRCENPTDLNDLYTRSRSEGFGAEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+K+R +++ DF AFEQ DVI+ P PT AF +G++ ++ Sbjct: 356 IMVGAYALSAGYYDAYYLKAQKLRRMVRDDFVNAFEQ-CDVIVGPVAPTPAFNIGEKSDD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 SM D++T+ VN+AG+PA+SVPA + P+GL L+G E L +V Sbjct: 415 PVSM--YLADLYTIPVNLAGMPAMSVPAGFSNGR-PVGLHLVGPYHSEAKLLNVAH 467 >gi|256959860|ref|ZP_05564031.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis Merz96] gi|293385049|ref|ZP_06630883.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis R712] gi|293389320|ref|ZP_06633781.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis S613] gi|300861750|ref|ZP_07107830.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TUSoD Ef11] gi|312906038|ref|ZP_07765051.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis DAPTO 512] gi|312909384|ref|ZP_07768240.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis DAPTO 516] gi|256950356|gb|EEU66988.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis Merz96] gi|291077727|gb|EFE15091.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis R712] gi|291081342|gb|EFE18305.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis S613] gi|295114062|emb|CBL32699.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Enterococcus sp. 7L76] gi|300848275|gb|EFK76032.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TUSoD Ef11] gi|310628033|gb|EFQ11316.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis DAPTO 512] gi|311290408|gb|EFQ68964.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis DAPTO 516] gi|315145228|gb|EFT89244.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX2141] gi|315161927|gb|EFU05944.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0645] Length = 489 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|149183836|ref|ZP_01862232.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. SG-1] gi|148848450|gb|EDL62704.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. SG-1] Length = 473 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 216/475 (45%), Positives = 317/475 (66%), Gaps = 10/475 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE-GI 74 ++ K++S +LVD + IE ++ A++ + AR A+E D +I +A+ L G+ Sbjct: 2 MQKKEVSVSDLVDESYKRIEAVEGKVKAFLTLDEDNARTKAKELDNKIGTDEAKGLLFGM 61 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PIG+KD TKG+ T S IL+ F P Y++TV KL + V +GKLNMDEFAMGSS E Sbjct: 62 PIGVKDNIVTKGLRTTCASKILENFNPIYDATVVNKLREAETVTIGKLNMDEFAMGSSTE 121 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + +PW ++D+ PGGSSGGS+A+VA S+G+DTGGSIRQPA+FTGTV Sbjct: 122 NSGFQKTSNPW-NLDTV----PGGSSGGSAASVAAGEVPFSLGSDTGGSIRQPAAFTGTV 176 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+++FA SLDQ G ITR V D+A LL+AIAG D D T ++ VP+Y Sbjct: 177 GLKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNAYLLQAIAGVDANDTTSADVEVPNYA 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 AL ++G+ + +PKEY + + ++ + L+ GA + E+SLPH++Y + Y Sbjct: 237 AALTGDVKGLKIAVPKEYLAEGVGEEARQSVMAALKVLESMGATVDEVSLPHSKYGVATY 296 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL+R+DG+RYG R +++L++Y+ TR+ GFG EVK RIM+GT+ LSS Sbjct: 297 YILASSEASSNLSRFDGIRYGYRTPNPENLLDLYKKTRAEGFGDEVKRRIMLGTFALSSG 356 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A++ RTLIK+DF + F DVI+ PTTPT AF +G++ ++ +M ND+ Sbjct: 357 YYDAYYKKAQQARTLIKKDFEDVFAN-YDVIIGPTTPTPAFKIGEKIDDPLTM--YANDI 413 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AG+P ISVP ++ +PLGLQ+IG+ F E T++ V E+ + + Sbjct: 414 LTIPVNLAGVPGISVPCGFSKEGLPLGLQIIGKHFDESTIYRVAHAYEQATDFHK 468 >gi|254515291|ref|ZP_05127352.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [gamma proteobacterium NOR5-3] gi|219677534|gb|EED33899.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [gamma proteobacterium NOR5-3] Length = 489 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/489 (46%), Positives = 317/489 (64%), Gaps = 10/489 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + +++E L + D S+V L ++ + I+ + +N++I V + A A +D Sbjct: 1 MSVTDSRSLTELAQALANGDTSSVALTEAALTRIDALDGALNSFITVDRESALRDATAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 RI +G A L GIPI KD F T+G+ T S +LD F P Y++TV ++L GAV++G Sbjct: 61 ARIADGSAAPLTGIPIAHKDIFCTRGLRTSCGSRMLDNFTPPYDATVVERLRSAGAVVIG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSSNE S+YGP +PW PGGSSGGS+AAVA L AA+ GTDT Sbjct: 121 KTNMDEFAMGSSNENSFYGPCKNPWDL-----NRVPGGSSGGSAAAVAAGLVAAATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G G+KPTYG SRLG+I++A SLDQ G + R+ D A+LL+A+AG+D Sbjct: 176 GGSIRQPAAFCGITGLKPTYGLVSRLGMIAYASSLDQGGPMARSAEDCALLLEAMAGHDP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T PV +Y L QS+ G+ +GIPKEY + L + + + + GA + Sbjct: 236 RDSTSAQRPVANYREQLAQSLDGLRIGIPKEYFGEGLDSGVAAVIEAALKEYESMGATLH 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 EISLP T ++PAYY+I+PAEAS+NL+RYDGVRYG R + KD+ ++Y +R GFG EV Sbjct: 296 EISLPRTALSIPAYYVIAPAEASTNLSRYDGVRYGHRCDNPKDLEDLYTRSREEGFGAEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RI++GTY LSS YD++Y +A+++R I DF AFE VDVI PTTP AF LG + Sbjct: 356 QRRILVGTYALSSGYYDAYYKKAQQVRRFIAGDFASAFES-VDVIAGPTTPGIAFALGSK 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ +M D++T++VN+AGLPA+S+PA + MP+GLQLIGQ F E L Sbjct: 415 TSDPTAM--YLEDIYTLSVNLAGLPAMSLPAGFSQ-GMPVGLQLIGQHFEEARLLGAAHQ 471 Query: 480 IEKEAGYFR 488 ++ + + R Sbjct: 472 FQQRSDWHR 480 >gi|260890547|ref|ZP_05901810.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Leptotrichia hofstadii F0254] gi|260859789|gb|EEX74289.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Leptotrichia hofstadii F0254] Length = 490 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/492 (45%), Positives = 321/492 (65%), Gaps = 16/492 (3%) Query: 1 MSELNFM--AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA-- 56 M ++N SE + +++K+I++ E+ +++ I+ ++ A+ + +KA A Sbjct: 1 MKKMNLYKKTASELAEMIKNKEITSEEVTRNFLDRIKAVEDKVGAFSNIFEEKALEQARK 60 Query: 57 ---EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 E +++ N + L G+P+ +KD +KG T A S IL + Y++TV +KL + Sbjct: 61 IDGENNEEGRKNYENTGLFGVPVALKDNIVSKGDLTTAASQILKNYVGVYDATVVKKLKE 120 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GAV++GK NMDEFAMGSSNE S +PW + PGGSSGGS+AAVA Sbjct: 121 AGAVLVGKANMDEFAMGSSNENSSIKSASNPWDL-----ERVPGGSSGGSAAAVAASEIP 175 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GTDTGGSIRQPAS TGTVGIKPTYGR SR G+++F SLDQ G + ++ +D A +++ Sbjct: 176 VALGTDTGGSIRQPASLTGTVGIKPTYGRVSRYGLMAFGSSLDQIGALAKSSQDLARVMQ 235 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 I+GYDE D T ++ VPDY L+ I G+ +G+PKEY D L +I + + + LK Sbjct: 236 IISGYDENDPTTADVEVPDYLSLLENDITGLKIGLPKEYFSDELDKSIKEVVDKTVETLK 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 GA++ E+SLP+T+YA+ YYIIS AEA+SNL+RYDGVRYG+R ++I EMY +R+ Sbjct: 296 KLGAEVKEVSLPYTKYAISTYYIISSAEAASNLSRYDGVRYGVRKSDENIEEMYVKSRTE 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIMIG YVLSS YD++Y +A ++R LI+ DF+ + VD+ILTP +PT+A Sbjct: 356 GFGDEVKRRIMIGNYVLSSGFYDAYYKKASQVRRLIRDDFSRVLSE-VDLILTPVSPTTA 414 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F G++ + M D+FTV++NMAGLPAISVPA +P+G+QLIG FRE+ L Sbjct: 415 FKKGEKVTDPVQM--YLGDIFTVSINMAGLPAISVPAGFV-NGLPVGIQLIGNYFREDLL 471 Query: 474 FSVGQIIEKEAG 485 F+V EKE G Sbjct: 472 FNVANKFEKERG 483 >gi|255971184|ref|ZP_05421770.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T1] gi|255962202|gb|EET94678.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T1] Length = 489 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 227/487 (46%), Positives = 319/487 (65%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + AYYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGIAAYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFDNVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ++Y D+ TV VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM-YMY-DILTVPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|196034581|ref|ZP_03101989.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus W] gi|195992624|gb|EDX56584.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cereus W] Length = 485 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 315/476 (66%), Gaps = 9/476 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VS +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSALHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S IL F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLLSSSEASANLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQ 474 >gi|134300180|ref|YP_001113676.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfotomaculum reducens MI-1] gi|172044321|sp|A4J6Z8|GATA_DESRM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|134052880|gb|ABO50851.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfotomaculum reducens MI-1] Length = 485 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/475 (47%), Positives = 311/475 (65%), Gaps = 11/475 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGI 74 L K+ISA+++ ++ IE ++ +Y+ + ++A A + D++I G++ L GI Sbjct: 15 LTKKEISALDITEAVYNRIEQVEDKVKSYLTLTREQAEIKARQVDQKIAAGESIGPLAGI 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T+GI T S IL F P Y +T +K++ VM+GK NMDEFAMGSS E Sbjct: 75 PIAIKDNMCTQGIRTTCASKILYNFVPPYSATSVEKVYTADMVMVGKTNMDEFAMGSSTE 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + +PW +D PGGSSGGS+AAVA S+G+DTGGSIRQPA+ G V Sbjct: 135 NSGFHLTHNPW-DLDRV----PGGSSGGSAAAVAAGEAIISLGSDTGGSIRQPAALCGVV 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G++++A SLDQ G TR V D A +L I G+D D+T NL DY Sbjct: 190 GMKPTYGSVSRYGLVAYASSLDQIGPFTRDVTDMAHVLNVICGHDPMDSTSANLKQTDYT 249 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + L I+GM +G+P+EY D + P + + + I L + GA + E S+PHT YA+PAY Sbjct: 250 QFLTNDIKGMKIGVPREYMADGIDPQVREKIKAAIQKLTELGAHVEETSMPHTDYAMPAY 309 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+ AEASSNLARYDGVRYGLRV E +D+++M+ +RS GFG EVK RIM+GTY LS+ Sbjct: 310 YLIATAEASSNLARYDGVRYGLRVEEARDLVDMFMRSRSQGFGDEVKRRIMLGTYSLSAG 369 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A K+RTLIK+DF AFE+ D +L+PT+PT+AF +G+ N+ M DV Sbjct: 370 YYDAYYLKALKVRTLIKQDFDRAFEK-YDALLSPTSPTTAFKIGEMVNDPIQM--YLQDV 426 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AG+PAIS+P L +P+GLQL+G+ F E TL + +E+ Y R Sbjct: 427 CTIPVNLAGIPAISLPCGLA-NNLPVGLQLMGKAFDEGTLLRIAYTLEQNTEYTR 480 >gi|296111687|ref|YP_003622069.1| glutamyl-tRNA amidotransferase, subunit A [Leuconostoc kimchii IMSNU 11154] gi|295833219|gb|ADG41100.1| glutamyl-tRNA amidotransferase, subunit A [Leuconostoc kimchii IMSNU 11154] Length = 488 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/477 (46%), Positives = 314/477 (65%), Gaps = 12/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D+L +K+++A EL + + I ++ Q+NA+I ++A A+++D+ D L Sbjct: 14 HDKLINKELTATELTQATLDNIAQTDDQLNAFISTNQEEALLQAKKTDEVANFSDI--LT 71 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+G+KD AT GI T S IL+GF+P Y++TV KL GA+ +GK NMDEFAMG S Sbjct: 72 GLPVGLKDNLATNGIQTTGASRILEGFKPVYDATVVSKLNTAGAISVGKTNMDEFAMGGS 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSYY + W D+T PGGSSGGS+AAVAG L ++G+DTGGSIRQPA+F G Sbjct: 132 TETSYYKKTTNAW---DATK--VPGGSSGGSAAAVAGGLVPFALGSDTGGSIRQPAAFNG 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ + A SLDQ G TRTV+D+A++L IAG+DE D+T + VPD Sbjct: 187 IVGLKPTYGRVSRWGLFAMASSLDQVGPFTRTVKDNALVLNTIAGFDEKDSTSADRDVPD 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L +++G+ + +PKEY + + P + T + I+ L+ GA + E+SLPHT+Y + Sbjct: 247 FTAKLTGNVKGLKIAVPKEYFGEGIDPKVASTVKAAIAQLEALGATVDEVSLPHTKYGVA 306 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII +EASSNL RYDGVRYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS Sbjct: 307 AYYIIMSSEASSNLQRYDGVRYGFRADDVKNLEDLYIKTRSEGFGDEVKRRIMLGTFSLS 366 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A KIRTL+ DF F DVI+ PT PT A+ +G+E ++ +M Sbjct: 367 AGAYDAFFKKAAKIRTLLIEDFNRVFAD-YDVIVGPTAPTVAYGIGEEIDDPTAM--YLA 423 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D T+ VN+AGLP +SV A + +P+GLQ+IG+PF E T++ G E+ + F Sbjct: 424 DALTIPVNLAGLPGLSVNAGFVD-GLPVGLQIIGKPFDEATVYQTGYAFEQASRLFE 479 >gi|315170708|gb|EFU14725.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX1342] Length = 489 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVQDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|319892943|ref|YP_004149818.1| Aspartyl-tRNA(Asn) / Glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus pseudintermedius HKU10-03] gi|317162639|gb|ADV06182.1| Aspartyl-tRNA(Asn) / Glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus pseudintermedius HKU10-03] gi|323464004|gb|ADX76157.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Staphylococcus pseudintermedius ED99] Length = 486 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/492 (45%), Positives = 316/492 (64%), Gaps = 13/492 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + ++ + ++ I E+V AIE ++ + +++ + + A AEE D Sbjct: 3 IRYESIENLQKMIKDNQIKPSEIVKDIYDAIEETDPTIQSFLALDKENAMKKAEELDTLQ 62 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L GIP+GIKD T+G+ T S +L+GF P YE+TV +KL + +++GK+ Sbjct: 63 AKGEMEGKLFGIPMGIKDNIITEGLETTCASRMLEGFVPIYEATVMKKLHNENGILIGKV 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMG S ETSY+ ++P+ K PGGSSGGS+AAVA L ++GTDTGG Sbjct: 123 NLDEFAMGGSTETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFTLGTDTGG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AIAG DE D Sbjct: 178 SIRQPAAYCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAIAGEDEMD 237 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T D+ + + I+ M + +PKEY + + + + + LK GA + E+ Sbjct: 238 STSAPDVATDFTADIGKDIKDMKIALPKEYIGEGVDEEVKEAVLKAAETLKSLGAIVEEV 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLP T Y +P+YY+I+ AEASSNLAR+DG+RYG E + + E+Y+ +RS GFG+EVK Sbjct: 298 SLPRTAYGIPSYYVIASAEASSNLARFDGIRYGYHSKEAQTLEELYKLSRSEGFGKEVKR 357 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLSS YD++Y +A+K+RTLIK DF F+ DVIL PTTPT AF LG E N Sbjct: 358 RILLGTYVLSSGYYDAYYKKAQKVRTLIKNDFENVFKD-YDVILGPTTPTVAFDLGAEIN 416 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M ND+ T VN+AGLP ISVP L E P+GLQLIG+PF E+TL+ V E Sbjct: 417 DPLTM--YANDLLTTPVNLAGLPGISVPCGLAENGRPIGLQLIGKPFDEKTLYRVAHQYE 474 Query: 482 KEAGYFRPHKWW 493 + F H + Sbjct: 475 TQ---FNLHDQY 483 >gi|196231388|ref|ZP_03130247.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chthoniobacter flavus Ellin428] gi|196224724|gb|EDY19235.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chthoniobacter flavus Ellin428] Length = 483 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 215/484 (44%), Positives = 309/484 (63%), Gaps = 18/484 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++V+ + +LR+K++S + V + I + Q++ Y+ A AE +D Sbjct: 2 ELTSLSVAGLQQKLRAKEVSPADTVRALEARIAQVDPQIHGYLSRDFDAALKLAESADVS 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + L G+PI IKD G A S IL G+R +Y++TV +KL GA+ G+ Sbjct: 62 L------PLGGVPIAIKDVINVTGEPCTAASKILLGYRSNYDATVIRKLRAAGAIPFGRT 115 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S +G +PW + PGGSSGGS+A VA AS+G+DTGG Sbjct: 116 NLDEFAMGSSTENSAFGRTNNPWDT-----SRVPGGSSGGSAAVVASHEAFASLGSDTGG 170 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+ G VG+KPTYGR SR G+I+FA SLDQ G T+TVRD+ +LL I+G D D Sbjct: 171 SIRQPAALCGCVGLKPTYGRVSRFGLIAFASSLDQIGPFTKTVRDAGLLLNVISGRDPQD 230 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++ PVPDY L + ++G+ +G+P+EY ++ + P +D + I + GA+IV++ Sbjct: 231 STSLDEPVPDYTAQLGRDLKGVRLGLPREYFIEGVDPQVDSAVRAAIKHYESLGAEIVDV 290 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLP+T++A+ YYII+ AEAS+NLAR+DGVRYG R + +L+ Y TR GFG EVK Sbjct: 291 SLPNTEHAVGVYYIIATAEASANLARFDGVRYGHRAPDPTGLLDQYGRTREEGFGPEVKR 350 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLSS YD++YLRA+K+RTLI+ DFT+AFE+ D I+ PT+P AF G + Sbjct: 351 RIILGTYVLSSGYYDAYYLRAQKVRTLIRDDFTKAFEK-CDAIVCPTSPEPAFKAGDRSD 409 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQ 478 + M D+FT+A N+AG+ ISVP +++P+GLQ++G+PF E L + Sbjct: 410 DPLKM--YLADIFTIAANLAGICGISVPCGFANVDGRQLPIGLQILGKPFGEAQLLQIAD 467 Query: 479 IIEK 482 E+ Sbjct: 468 AYEQ 471 >gi|220933701|ref|YP_002512600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thioalkalivibrio sp. HL-EbGR7] gi|254790410|sp|B8GL95|GATA_THISH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219995011|gb|ACL71613.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 484 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 215/471 (45%), Positives = 314/471 (66%), Gaps = 10/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E L + S+VEL + +++ IE + +N+++ V A++A A A+ +D R G+A Sbjct: 6 IAELSAALTKGECSSVELTEHFLKRIEALDGGLNSFVTVTAEQALAQAKAADDRRARGEA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F T G+ T S +LD F Y++TV ++ G MLGK NMDEFA Sbjct: 66 GPLTGVPMAQKDIFCTDGVRTTCGSKMLDNFIAPYDATVVERFKAEGCPMLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNETS++GPV +PW + PGGSSGGS+AAVA L ++ GTDTGGSIRQPA Sbjct: 126 MGSSNETSFHGPVKNPWDTAR-----VPGGSSGGSAAAVAARLTPSATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I+FA SLDQ G + T D A+L ++G+D D+T + Sbjct: 181 ALCGITGLKPTYGRVSRWGMIAFASSLDQGGPMAATAEDCALLANVMSGFDPRDSTSIER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P D+ L++ ++G+ +G+P+E+ + L + K + I K GA++ E+ LP++ Sbjct: 241 PAEDFTARLNEPLKGLRIGLPREFFGEGLDAGVAKAVDEAIEQYKQLGAEVKEVGLPNSG 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++PAE SSNLAR+DGVRYG R E KD++++Y +R GFG EVK RIM+GT Sbjct: 301 LSVPAYYVVAPAECSSNLARFDGVRYGYRCENPKDLMDLYTRSRGEGFGAEVKRRIMVGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ +D++YL+A+KIR LI DF AFE+ VDVIL PT+P++AF LG++ ++ +M Sbjct: 361 YALSAGYFDAYYLKAQKIRRLIADDFARAFEE-VDVILGPTSPSTAFRLGEKTDDPVTM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D++T+AVN+AGLP +S+PA + +P+GLQLIG F E L V Sbjct: 419 -YLSDIYTIAVNLAGLPGMSIPAGFSD-GLPVGLQLIGNYFDEARLLGVAH 467 >gi|319654352|ref|ZP_08008440.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. 2_A_57_CT2] gi|317394052|gb|EFV74802.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. 2_A_57_CT2] Length = 486 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 316/482 (65%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 VSE L K+I+ +LV + I ++ A++ + +KAR AA+ D +I +A Sbjct: 9 VSELHQLLHKKEITVTDLVSESYKRIGEVEDKVQAFLTLDEEKAREAAKRMDGKIGTDEA 68 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PIG+KD TKG+ T + S IL+ F P Y++T KL + + +GKLNMDEF Sbjct: 69 KGLLFGMPIGVKDNIVTKGLRTTSASKILENFDPIYDATAASKLHNAETITIGKLNMDEF 128 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW + PGGSSGGS+A+VA S+G+DTGGSIRQP Sbjct: 129 AMGSSNENSGFQVTRNPWNL-----ERVPGGSSGGSAASVAAGEVLFSLGSDTGGSIRQP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYGR SR G+I+FA SLDQ G ITRTV D+A LL+AI+G D D+T N Sbjct: 184 ASYCGVVGLKPTYGRVSRFGLIAFASSLDQIGPITRTVEDNAYLLQAISGVDPMDSTSAN 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VP Y L ++G+ + +PKEY + ++ + ++ + L+ GA E+SLPH+ Sbjct: 244 VEVPSYAENLTGDVKGLRIAVPKEYLAEGVNEEVRQSVLDALKVLEKLGATWEEVSLPHS 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NLAR+DGVRYG R + ++++++Y+ TR+ GFG EVK RIM+G Sbjct: 304 KYALATYYLLSSSEASANLARFDGVRYGYRTADPENLIDLYKKTRAEGFGDEVKRRIMLG 363 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIK+DF FE+ DVI+ PT PT AF +G EN S + Sbjct: 364 TFALSSGYYDAYYKKAQKVRTLIKQDFENVFEK-YDVIIGPTAPTPAFKIG--ENTSDPL 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+P ISVP + +PLGLQ+IG+ F E T++ V E+ + Sbjct: 421 TMYANDILTIPVNLAGVPGISVPCGFAD-GLPLGLQIIGKHFDESTVYRVAHAFEQATEF 479 Query: 487 FR 488 + Sbjct: 480 HK 481 >gi|218289364|ref|ZP_03493598.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alicyclobacillus acidocaldarius LAA1] gi|218240470|gb|EED07651.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alicyclobacillus acidocaldarius LAA1] Length = 484 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/479 (47%), Positives = 315/479 (65%), Gaps = 13/479 (2%) Query: 7 MAVSESRDRLRS---KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 M+ ++ LRS + A + V+ ++AI + ++ A++ V ++A AAA+ D+ Sbjct: 1 MSTPTVKEILRSIAAGETRARDWVEQSLRAIREIDGRLKAFLLVDEEQALAAADRIDRAK 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + +A L G+P KD T+G+ T A S IL+ + P Y +TV KL AVM+GK N Sbjct: 61 MYQNA-PLRGVPYAAKDNIVTRGVRTTAASRILENYIPPYNATVIDKLQQAAAVMVGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS ETS + +P+ + PGGSSGGS+AAVA L ++G+DTGGS Sbjct: 120 MDEFAMGSSTETSAFQKTANPY-----GEDRVPGGSSGGSAAAVAAGLVPFALGSDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FTG G+KPTYGR SR G+I+FA SLDQ G TRT D+A++L AI G+D D+ Sbjct: 175 IRQPAAFTGCFGLKPTYGRVSRYGLIAFASSLDQIGPFTRTAEDAALVLNAICGHDPLDS 234 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T PVP++ +D+ ++G+ VGI + + L P + + + I L+ GA+IVEI Sbjct: 235 TSSRQPVPNFADGIDRGVKGVRVGIVRHLPEEGLEPGVKEAVDRAIRQLEAEGAEIVEID 294 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPH +YA+ YY+I+PAEASSNLARYDGVRYG R E ++EMYE +RS GFG EVK RI Sbjct: 295 LPHMEYAVATYYLIAPAEASSNLARYDGVRYGRRAEASSLIEMYERSRSEGFGMEVKRRI 354 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LSS YD++Y RA+++RTLI++D+ AFE DVI+TPT PT+AF LG++ +N Sbjct: 355 IIGTYALSSGYYDAYYKRAQQMRTLIRQDYERAFE-FCDVIVTPTAPTTAFKLGEKVDNP 413 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M ND++T+ N+AGLP SVP + +P+GLQ+IG+PF E T+ V E+ Sbjct: 414 LQM--YLNDIYTIPANLAGLPGASVPCGFVD-GLPVGLQIIGRPFDEATILRVAHAYEQ 469 >gi|89093932|ref|ZP_01166877.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Oceanospirillum sp. MED92] gi|89081818|gb|EAR61045.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Oceanospirillum sp. MED92] Length = 483 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/471 (46%), Positives = 310/471 (65%), Gaps = 10/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E L++ + S+VEL +Y+ I+ +S+ N++I V ++A A A+ +D+ I G A Sbjct: 6 LAELAQGLKAGEFSSVELTQAYLNRIKAEDSKYNSFITVTEEQALAQAKTADEAIAAGTA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 G+P KD F T+G+ T S +LD F Y +TV +K G VMLGK NMDEFA Sbjct: 66 GAFTGLPFAHKDIFCTQGVRTSCASKMLDNFISPYNATVVEKFNAAGGVMLGKTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE+S+YG +PW + + PGGSSGGS+AAVA L A+ GTDTGGSIRQPA Sbjct: 126 MGSSNESSFYGVAKNPWDT-----ECVPGGSSGGSAAAVAAQLAPAATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G+KPTYGR SR G+I+FA SLDQ G +T+T D+A++L +AG+D+ D+T V+ Sbjct: 181 ALCGITGLKPTYGRVSRFGMIAFASSLDQGGPMTKTAEDAAMMLNVMAGFDKNDSTSVDR 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY L++ + G+T+G+PKE+ +D L I + Q I + GA + E+SLP+T Sbjct: 241 EVPDYTADLNKPLDGLTIGLPKEFFMDDLDSEIAERTQAAIKEFEKLGATVKEVSLPNTA 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYYII+PAEASSNL+R+DGVRYG R E D+ ++Y+ +R GFG EVK RIMIG Sbjct: 301 LSIPAYYIIAPAEASSNLSRFDGVRYGYRCENPVDLEDLYKRSRGEGFGAEVKRRIMIGA 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS YD++Y +A++IR LI+ D+ + + VDVI+ PTTP AF +G E S + Sbjct: 361 YALSEGFYDAYYNKAQQIRRLIRDDYAKVLSE-VDVIMGPTTPHPAFKIG--EKTSDPVA 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 D+FT+++N+AGLP +SVP +P GLQ+IG F E+ L +V Sbjct: 418 MYMEDIFTISLNLAGLPGMSVPCGTV-NGLPTGLQIIGDYFAEQKLLNVAH 467 >gi|56962869|ref|YP_174596.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus clausii KSM-K16] gi|81600996|sp|Q5WJ20|GATA_BACSK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56909108|dbj|BAD63635.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus clausii KSM-K16] Length = 483 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/480 (46%), Positives = 326/480 (67%), Gaps = 11/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++++ + L +K+I+ +LVD + I + +S++ A++ + ++AR A++ D+ + + Sbjct: 7 SLTKLHELLAAKEINVSDLVDVSYKRIADVDSKVKAFLTLDEERARDLAKKLDE-VDASE 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIGIKD TKG+ T S IL+ F P Y++TV KL V +GK+NMDEF Sbjct: 66 KGVLFGMPIGIKDNIVTKGLRTTCSSKILENFDPIYDATVVTKLRGAETVTIGKINMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW + + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 126 AMGSSNENSAFQVTTNPWNT-----DYVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AIAG+ D+T + Sbjct: 181 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLEAIAGHCPADSTSAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPVP Y +L I+G+ +G+P EY D +S + K ++ L+ GA E+SLP++ Sbjct: 241 LPVPPYRESLTGEIKGLRIGVPSEYIGDGVSEEMRKAVFDALNVLEKEGAVWEEVSLPYS 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIG 366 +YAL AYY+I+ +EAS+NLAR+DGVRYG R + D +L+MY+NTR+ GFG EVK RIM+G Sbjct: 301 KYALAAYYVIASSEASANLARFDGVRYGYRTDNADNLLDMYKNTRAEGFGDEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK+DF + F DVI+ PTTPT AF +G + ++ +M Sbjct: 361 TFALSSGYYDAYYKKAQQVRTLIKKDFDDVFTN-YDVIIGPTTPTPAFKIGAKTDDPLTM 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PA+S+P + +PLGLQ+IG+ F E T++ V + EK + Sbjct: 420 --YANDILTIPVNLAGVPALSLPCGF-KDGLPLGLQIIGKHFDEATIYRVADVYEKATNF 476 >gi|332686166|ref|YP_004455940.1| aspartyl-tRNA(Asn) amidotransferase subunit A/ glutamyl-tRNA(Gln) amidotransferase subunit A [Melissococcus plutonius ATCC 35311] gi|332370175|dbj|BAK21131.1| aspartyl-tRNA(Asn) amidotransferase subunit A/ glutamyl-tRNA(Gln) amidotransferase subunit A [Melissococcus plutonius ATCC 35311] Length = 489 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/489 (45%), Positives = 325/489 (66%), Gaps = 11/489 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L +V+E D L SK+I+A +L + I+ ++ +++A+I V +KA A+ D Sbjct: 1 MTKLYDKSVTELHDLLISKEITAQDLTKETLDRIKETDDKIDAFITVSEEKALELAKFVD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K+ I ++ L GIP+G+KD TK I T A S IL F+P+Y++TV K++ + +G Sbjct: 61 KKGIT-ESNFLAGIPVGVKDNIITKDILTTAASKILYNFKPNYDATVMDKMYQADMIPIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S+ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSSETSYFKNTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G ITR V+D+A++L I+GYD+ Sbjct: 175 GGSIRQPAAFNGVVGLKPTYGRISRFGLIAFASSLDQIGPITRNVKDNALVLNTISGYDK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPD+ L I+GM + +PKEY + + + ++ L+D GA + Sbjct: 235 RDSTSAGRSVPDFTEGLTGDIKGMKIALPKEYIGEGVDREVCHAIEKAAETLRDLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++ + YYI++ +EASSNL RYDG+RYG R E KD+ ++Y ++RS GFG EV Sbjct: 295 EVSLPHSKSGVAVYYIVASSEASSNLQRYDGIRYGYRSENSKDLEDLYIHSRSEGFGDEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+ Y +A ++RTLIK+DF + FE+ D+I+ PTTPT AF G + Sbjct: 355 KRRIMLGTFALSASAYDACYKKAGQVRTLIKQDFDKVFEE-YDLIIGPTTPTVAF--GLK 411 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 EN + + +D+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E+T++ Sbjct: 412 ENFNQPISMYMSDILTIPVNLAGLPGMSIPAGFSE-GLPIGLQIIGKHFDEKTMYKAAYA 470 Query: 480 IEKEAGYFR 488 E+ +++ Sbjct: 471 FEQATNFYK 479 >gi|116494560|ref|YP_806294.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus casei ATCC 334] gi|122264014|sp|Q03AC0|GATA_LACC3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116104710|gb|ABJ69852.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus casei ATCC 334] Length = 484 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/481 (46%), Positives = 316/481 (65%), Gaps = 11/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + ++LRS +++ +LVD + I +++++A++ + A A+ A D I Sbjct: 7 SIDQLHEQLRSGKVTSSQLVDETLAGINQLDAEVDAFLALNADGAKEKAAAVDAAGIAD- 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PI IKD TKG+ T A S IL F P Y++TV QKL GA+ +GK NMDEF Sbjct: 66 DQPLAGVPIAIKDNIVTKGVVTTAASKILANFNPIYDATVIQKLDAAGAINVGKTNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + + W D T PGGSSGGS+AAVA A++G+DTGGSIRQP Sbjct: 126 AMGSSTENSAFKTTKNAW---DHTR--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+I+F+ SLDQ G +TR V+D+A LL IAG+DE D+T + Sbjct: 181 AAFNGIVGVKPTYGRVSRWGLIAFSSSLDQIGTLTRHVKDAAQLLNVIAGHDERDSTTAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 PVPD+ + Q I+GM + +PKEY + P + + +D GA + E+SLPHT Sbjct: 241 TPVPDFTAKIGQDIKGMKIALPKEYLGKGVDPAVADKIKAAAKQFEDMGATVTEVSLPHT 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 QYA+P+YYII+ +EASSNL R+DG+RYG R + K+I ++Y +RS GFG EVK RIM+G Sbjct: 301 QYAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVKNIEDVYVRSRSEGFGPEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD+++ +A ++RTLI RDF + F+ D+I+ PTTPT AF +G++ + +M Sbjct: 361 TFSLSAGFYDAYFKKAGQVRTLITRDFEDVFKD-YDLIIGPTTPTVAFKIGEKVTDPVTM 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AGLPA SVPA + MP+GLQLIG+ F E T+F V E + Y Sbjct: 420 --YMNDILTIPVNLAGLPAASVPAGFVD-GMPVGLQLIGKHFDESTIFQVAAAFEAQNDY 476 Query: 487 F 487 Sbjct: 477 L 477 >gi|116513597|ref|YP_812503.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275633|sp|Q04BV7|GATA_LACDB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116092912|gb|ABJ58065.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 480 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/477 (47%), Positives = 307/477 (64%), Gaps = 17/477 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D+L+S +SA +L I I+ ++ ++NA+I V + AE+ D L Sbjct: 12 NDKLKSGAVSADQLAKDTIANIKKTDEKINAFITV--DEDAKPAEDLDFN------NKLA 63 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD T G+ T A SHIL F P YESTV KL A ++GK NMDEFAMGSS Sbjct: 64 GVPIAIKDNIITNGLKTTAASHILYNFEPVYESTVVAKLKAAQATIIGKTNMDEFAMGSS 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSY+G +PW + +K PGGSSGGS+AAVA A++G+DTGGSIRQPASF G Sbjct: 124 TETSYFGDTKNPW----NLNK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNG 178 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 GIKPTYGR SR G+I+FA SLDQ G++++ V+DSA +L IAG D+ DAT VPD Sbjct: 179 IFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAGADDRDATVSEKEVPD 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y LD+ ++G+ V +PKEY D + + K + I L+ GA I E+SLPHT+Y +P Sbjct: 239 YTSFLDKDVKGLRVAVPKEYMSDAVEEGVRKAVEAQIELLRANGAIINEVSLPHTKYVVP 298 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ +EAS+NL RYDG+RYG R E K++ E++ +RS GFG EVK RIM+G++ LS+ Sbjct: 299 TYYIIASSEASANLERYDGIRYGYRAEAKNLDEVFLKSRSEGFGDEVKRRIMLGSFALSA 358 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD +L+A K+RTLI +DF + FE DVI+ P + +AF L E ++ M + ND Sbjct: 359 GAYDKFFLQAAKVRTLICQDFDKIFEDN-DVIVGPVSTETAFDLNSEISDQIKMYN--ND 415 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + T++ NMAG+PA SVPA L E MP+G Q++ + F E +F V IE+ ++ Sbjct: 416 ILTISANMAGIPAASVPAGLSETTGMPVGFQIMAKRFDEGHVFQVADFIERSNKFYE 472 >gi|229546562|ref|ZP_04435287.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis TX1322] gi|229548671|ref|ZP_04437396.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis ATCC 29200] gi|255973808|ref|ZP_05424394.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T2] gi|256617612|ref|ZP_05474458.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis ATCC 4200] gi|256854408|ref|ZP_05559772.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecalis T8] gi|256957405|ref|ZP_05561576.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis DS5] gi|256964438|ref|ZP_05568609.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis HIP11704] gi|257077599|ref|ZP_05571960.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis JH1] gi|257086084|ref|ZP_05580445.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis D6] gi|257089152|ref|ZP_05583513.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis CH188] gi|257420985|ref|ZP_05597975.1| glutamyl-tRNA(Gln) amidotransferase [Enterococcus faecalis X98] gi|294779930|ref|ZP_06745311.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis PC1.1] gi|307269779|ref|ZP_07551109.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX4248] gi|307272539|ref|ZP_07553792.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0855] gi|307274686|ref|ZP_07555858.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX2134] gi|307284513|ref|ZP_07564675.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0860] gi|307296385|ref|ZP_07576209.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0411] gi|312904256|ref|ZP_07763418.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0635] gi|312953110|ref|ZP_07771959.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0102] gi|229306187|gb|EEN72183.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis ATCC 29200] gi|229308307|gb|EEN74294.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecalis TX1322] gi|255966680|gb|EET97302.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis T2] gi|256597139|gb|EEU16315.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis ATCC 4200] gi|256709968|gb|EEU25012.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecalis T8] gi|256947901|gb|EEU64533.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis DS5] gi|256954934|gb|EEU71566.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis HIP11704] gi|256985629|gb|EEU72931.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis JH1] gi|256994114|gb|EEU81416.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis D6] gi|256997964|gb|EEU84484.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecalis CH188] gi|257162809|gb|EEU92769.1| glutamyl-tRNA(Gln) amidotransferase [Enterococcus faecalis X98] gi|294452979|gb|EFG21400.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis PC1.1] gi|306496040|gb|EFM65625.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0411] gi|306503190|gb|EFM72444.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0860] gi|306508615|gb|EFM77713.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX2134] gi|306510824|gb|EFM79841.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0855] gi|306513889|gb|EFM82491.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX4248] gi|310628944|gb|EFQ12227.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0102] gi|310632352|gb|EFQ15635.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0635] gi|315025776|gb|EFT37708.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX2137] gi|315029100|gb|EFT41032.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX4000] gi|315036104|gb|EFT48036.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0027] gi|315146958|gb|EFT90974.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX4244] gi|315153979|gb|EFT97995.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0031] gi|315156743|gb|EFU00760.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0043] gi|315157729|gb|EFU01746.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0312] gi|315578802|gb|EFU90993.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0630] gi|323479921|gb|ADX79360.1| glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis 62] gi|329576883|gb|EGG58368.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Enterococcus faecalis TX1467] Length = 489 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R + LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSDNVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|90415734|ref|ZP_01223668.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [marine gamma proteobacterium HTCC2207] gi|90333057|gb|EAS48227.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [marine gamma proteobacterium HTCC2207] Length = 484 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 218/480 (45%), Positives = 312/480 (65%), Gaps = 10/480 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L+ K S+VEL ++ I ++ NA I V A +A AA +DKR+ Sbjct: 1 MHNLTIAELVKGLQEKAFSSVELTQHFLARIAKLDANYNAVITVTADQALKAAAAADKRL 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 GDA L G+PI KD F T G+ T S +LD F P Y +TV + GAV+LGK N Sbjct: 61 AAGDAPALCGVPILHKDIFCTDGVRTSCGSKMLDNFIPPYNATVVENFEQAGAVVLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNETS+YGPV +PW S + G ++ ++ G + TDTGGS Sbjct: 121 MDEFAMGSSNETSFYGPVKNPWASDSVPGGSSGGSAAAVAARLAPG-----ATATDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G G+KPTYGR SR G+I+FA SLDQ G + RT D AILL +A YD+ D+ Sbjct: 176 IRQPAALCGITGLKPTYGRVSRWGMIAFASSLDQGGPMARTAEDCAILLNCMASYDDKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TC++ VPDY L+ I+G+ +G+P EY + L P +K + ++ + GA++VEIS Sbjct: 236 TCIDREVPDYSATLNDGIKGLKIGVPLEYFSEGLDPETEKAVRTALAEFEAQGAELVEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+T ++PAYY+I+PAEAS+NL R+DGVRYG R E D+ ++Y TR+ GFG EVK R Sbjct: 296 LPNTGLSVPAYYVIAPAEASANLTRFDGVRYGYRCENPSDLNDLYTRTRAEGFGDEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTY LS+ YD++Y +A+++R LI++DF +AF+Q VDVI+ PTTP+ AF G + ++ Sbjct: 356 ILIGTYCLSAGYYDAYYGKAQQVRQLIQQDFEKAFQQ-VDVIMGPTTPSPAFKFGSKGDD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D++T+A N+AGLP +SVP + ++K P+GLQ+IG F E + + ++ Sbjct: 415 PVAM--YLEDIYTIATNLAGLPGMSVPCGMVDEK-PVGLQIIGNYFDEARMLNTAHQFQQ 471 >gi|320355384|ref|YP_004196723.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfobulbus propionicus DSM 2032] gi|320123886|gb|ADW19432.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfobulbus propionicus DSM 2032] Length = 486 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 218/484 (45%), Positives = 317/484 (65%), Gaps = 9/484 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E+R L + ++S+V L +S + IE ++ +Y+ + + A AE++D Sbjct: 2 ELYALPLHEARRLLETGEVSSVALTESVLARIEAVEPKVQSYLTLDREGALRQAEQADIA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ IKD T + T S IL+ F YE+TV KL + G+V++GKL Sbjct: 62 RKNGQGGPLCGIPLAIKDVLCTTTMPTTCGSRILENFVAPYEATVVTKLAEAGSVLVGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 MDEFAMGS++E + +PW+ + GGSSGGS+AAVA C AS+G+DTGG Sbjct: 122 AMDEFAMGSTSENCAFKVPHNPWKL-----GYVAGGSSGGSAAAVAADECFASLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS GTVG+KPTYGR SR G+++FA SLDQ G +T+ VRD A+++ AI+G+D D Sbjct: 177 SIRQPASLCGTVGMKPTYGRVSRYGLVAFASSLDQVGPLTKEVRDCALMMNAISGHDPKD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + L VPD+ +L ++G+ +G+P+EY + L P +D+ + GI L++AGA++VE+ Sbjct: 237 STSIKLDVPDFTASLQDGLKGVKIGLPREYFVQGLDPEVDRAVRDGIRMLQEAGAELVEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKH 361 +LPHT Y + YY+I+PAEASSNLAR+DGVRYG R D ++EMY TRS GFG EVK Sbjct: 297 TLPHTDYCVAVYYLIAPAEASSNLARFDGVRYGYRDRSADSLIEMYNRTRSQGFGDEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI+IGTY LSS YD++Y +A ++RTLIK DF +AF D++++P PT A+ +G + + Sbjct: 357 RILIGTYALSSGYYDAYYKKASQVRTLIKDDFAKAFAH-CDLMVSPVCPTPAWKIGDKAD 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + +D+ T++ N+AG+P +SVP +P+GLQL F EE L +E Sbjct: 416 D--PLALYLSDILTLSANLAGVPGMSVPCGFSSDGLPIGLQLQAAHFNEEILLRAAYNLE 473 Query: 482 KEAG 485 + AG Sbjct: 474 QRAG 477 >gi|261409298|ref|YP_003245539.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Paenibacillus sp. Y412MC10] gi|329928609|ref|ZP_08282476.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Paenibacillus sp. HGF5] gi|261285761|gb|ACX67732.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Paenibacillus sp. Y412MC10] gi|328937725|gb|EGG34134.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Paenibacillus sp. HGF5] Length = 485 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/482 (44%), Positives = 312/482 (64%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE ++L++K++S +LVD I ++ A+I + + AR +A+ D ++ G+ Sbjct: 8 LSEIHNKLQNKELSVTDLVDQAFTRISEREDRVKAFITLDEEGARTSAKALDDKLAAGET 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L G+P+GIKD T+G+ T S L F P Y++TV KL V +GKLNMDEF Sbjct: 68 RGLLFGLPVGIKDNIVTEGLRTTCASQFLSNFTPVYDATVVGKLRAADTVTIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG SNE S + PV +PW +D + GGS+ +A A F ++G+DTGGSIRQP Sbjct: 128 AMGGSNENSSFYPVRNPW-DLDRVPGGSSGGSAAAVAAGEAYF----ALGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYG SR G+++FA SLDQ G +T+ V DSA +L+AIAGYD D+T Sbjct: 183 ASYCGVVGLKPTYGLVSRFGLVAFASSLDQIGPLTKNVEDSAYVLQAIAGYDPMDSTSAK 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPDY AL + G+ + +PKEY + + + +T + L+ GA E+SLPHT Sbjct: 243 VDVPDYLSALSGDVAGLRIAVPKEYLGEGVDAEVKETVLNALKVLESLGATWDEVSLPHT 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIG 366 YA+ YY+++ +EASSNLAR+DGVRYG+R + ++++Y +RS GFG EVK RIM+G Sbjct: 303 DYAVATYYLLASSEASSNLARFDGVRYGVRSDNAGSLIDLYHESRSQGFGDEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LSS YD++YL+A+K RTLIK+DF + FEQ DVI+ PT PT+AF LG + ++ +M Sbjct: 363 TYALSSGYYDAYYLKAQKARTLIKQDFDKVFEQ-YDVIIGPTAPTTAFKLGTQVDDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ V++AG+PA+SVP + +P+G+Q+IG+ F E T+ V E+ + Sbjct: 422 --YLNDILTIPVSLAGVPAVSVPCGFAD-GLPVGMQIIGKAFDESTVLRVAHAYEQNTDH 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|157413279|ref|YP_001484145.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. MIT 9215] gi|166989679|sp|A8G4M8|GATA_PROM2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157387854|gb|ABV50559.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. MIT 9215] Length = 482 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/481 (46%), Positives = 312/481 (64%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R + + + S ELV+ + I++ + ++N+YI A AE DK I N Sbjct: 1 MDFNSLRKEIINNNASVKELVNDFFDKIKHKDPEINSYICTTKDNAIEQAENIDKLIQNK 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD TKG+ T S +L F P YEST + KLW +G + LGK N+D Sbjct: 61 EKLPPLAGIPIAIKDNICTKGVATTCASKMLKSFVPPYESTASSKLWSSGGICLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A+VA CAA+IG+DTGGSIR Sbjct: 121 EFAMGSSTETSLFGVTSNPWDI-----NRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G IT TV D+A +L +I+G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPFDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP+Y L++SI G+ +GI KE + L+ + ++ G+ K GA+I+E+ Sbjct: 236 LDKPVPNYLNDLNKSINGLKIGIIKECFEHPGLNQEVKESVLSGVDRFKALGAEIIEVEC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R EG ++++M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRSKEGSNLVDMTSKSRAKGFGDEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+K+RTLI++DF AF++ VDV+LTPT PT+AF G N+ Sbjct: 356 LIGTYALSAGYSDAYYKKAQKVRTLIRKDFDNAFKK-VDVLLTPTCPTTAFLKGDYVNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM +D+ TV VN+AGLPAIS+P K +P+GLQLIG E + + I E + Sbjct: 415 LSM--YLSDLLTVPVNLAGLPAISIPCGFDTKGLPIGLQLIGNVLEEGKILNAANIFEID 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|313885188|ref|ZP_07818940.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312619879|gb|EFR31316.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 491 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/474 (45%), Positives = 308/474 (64%), Gaps = 10/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L + S+ +LV + IE + +NA+I + ++A AAAE++D+ DA L GIP Sbjct: 15 LAAGKYSSKDLVTAIYADIEQKDEAINAFITLNKEQALAAAEQADQIGYGSDAPVLNGIP 74 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IKD T+G+ T A S +L+ F P Y++TV KL GA+++GK+NMDEFAMG SN+T Sbjct: 75 LAIKDNILTEGLRTTAASKMLENFVPTYDATVIAKLKAAGAIIIGKVNMDEFAMGGSNQT 134 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+GPV +PW + PGGSSGGS+A VA ++GTDTGGS+R PA+F G VG Sbjct: 135 SYFGPVHNPWDL-----ERVPGGSSGGSAAVVASQQVPGALGTDTGGSVRNPAAFNGLVG 189 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SRLG+ISF SLDQ G +T TV D+A+LL+ IAG+DE D+T + D+ Sbjct: 190 MKPTYGTVSRLGVISFGSSLDQVGPLTHTVADNALLLEVIAGHDEGDSTSLPTEQYDFSS 249 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + Q ++GM + PKEY++D ++ I + Q+ + + GA + E+SLPH+ Y + YY Sbjct: 250 KIGQDLKGMKIAFPKEYKVDSINTEIRQRMQEAADFFESQGATVEEVSLPHSVYGINVYY 309 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 II+ +EASSNL RYDG+RYG R E L E+Y +RS GFG EVK RI++GT+ LS+ Sbjct: 310 IIASSEASSNLQRYDGIRYGYRSEAAQTLEEVYVQSRSEGFGDEVKRRIILGTFSLSAGA 369 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN-DV 433 +D ++ +A ++RTLIK++F F+Q D+I+ PTT ++AF +G +E +Y D+ Sbjct: 370 FDLYFKKAAQVRTLIKQEFQAVFDQ-YDLIMGPTTTSTAFLIGGKETKDPV--EMYTADL 426 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 TV N+ GLPAIS+PA L + +P+GLQL+ + E TL+ V E+ Y Sbjct: 427 LTVNSNLTGLPAISIPAGLDQAGLPIGLQLMAKAQDEATLYQVAHAFEQGHDYL 480 >gi|254526276|ref|ZP_05138328.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Prochlorococcus marinus str. MIT 9202] gi|221537700|gb|EEE40153.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Prochlorococcus marinus str. MIT 9202] Length = 482 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/481 (46%), Positives = 312/481 (64%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R + S + S ELV+ + I++ + ++N+YI A A+ DK I N Sbjct: 1 MDFNSLRKEIISNNASVKELVNDFFAKIKHKDPEINSYICTTKDNAIEQADNIDKLIQNK 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD TKG+ T S +L F P YEST + KLW +G + LGK N+D Sbjct: 61 EKLPPLAGIPIAIKDNICTKGVATTCASKMLKSFVPPYESTASSKLWSSGGICLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A+VA CAA+IG+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGVTSNPWDI-----NRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G IT TV D+A +L +I+G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPFDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP+Y L++SI G+ +GI KE + L+ + ++ G+ K GA+I+E+ Sbjct: 236 LDKPVPNYLNDLNKSINGLKIGIIKECFEHPGLNQEVKESVLSGVDRFKALGAEIMEVEC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R EG ++++M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRSNEGSNLVDMTSKSRAKGFGDEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+K+RTLI++DF AF++ VDV+LTPT PT+AF G N+ Sbjct: 356 LIGTYALSAGYSDAYYKKAQKVRTLIRKDFDNAFKK-VDVLLTPTCPTTAFLKGDYVNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM +D+ TV VN+AGLPAIS+P K +P+GLQLIG E + + I E + Sbjct: 415 LSM--YLSDLLTVPVNLAGLPAISIPCGFDTKGLPIGLQLIGNVLEEHKILNAANIFEID 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|258510690|ref|YP_003184124.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477416|gb|ACV57735.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 484 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/479 (47%), Positives = 311/479 (64%), Gaps = 13/479 (2%) Query: 7 MAVSESRDRLRS---KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 M+ ++ LRS + A + V+ ++AI + ++ A++ V ++A AAA+ D+ Sbjct: 1 MSTPTVKEILRSIAAGETRARDWVEQSLRAIREIDGRLKAFLLVDEEQALAAADRIDRAK 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + A L G+P KD T+G+ T A S IL+ + P Y +TV KL AVM+GK N Sbjct: 61 MYQHA-PLRGVPYAAKDNIVTRGVRTTAASRILENYIPPYNATVIDKLQQAAAVMVGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS ETS + +P+ + PGGSSGGS+AAVA L ++G+DTGGS Sbjct: 120 MDEFAMGSSTETSAFQKTANPY-----GEDRVPGGSSGGSAAAVAAGLVPFALGSDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+FTG G+KPTYGR SR G+I+FA SLDQ G TRT D+A++L AI G+D D+ Sbjct: 175 IRQPAAFTGCFGLKPTYGRVSRYGLIAFASSLDQIGPFTRTAEDAALVLNAICGHDPLDS 234 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T PVP++ +D+ ++G+ VGI + + L P + + I L+ GA+IVEI Sbjct: 235 TSSRQPVPNFADGIDRGVKGVRVGIVRHLPEEGLEPGVKAAVDRAIQQLEAEGAEIVEID 294 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPH +YA+ YY+I+PAEASSNLARYDGVRYG R E +LEMYE +RS GFG EVK RI Sbjct: 295 LPHMEYAVATYYLIAPAEASSNLARYDGVRYGRRAEASSLLEMYERSRSEGFGMEVKRRI 354 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LSS YD++Y RA+++RTLI++D+ AFE DVI PT PT+AF LG++ +N Sbjct: 355 IIGTYALSSGYYDAYYKRAQQMRTLIRQDYERAFE-ACDVIAMPTAPTTAFRLGEKLDNP 413 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M ND++T+ N+AGLP SVP + +P+GLQLIG+PF E T+ V E+ Sbjct: 414 LQM--YLNDIYTIPANLAGLPGASVPCGFVD-GLPVGLQLIGRPFDEATILRVAHAYEQ 469 >gi|325980990|ref|YP_004293392.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosomonas sp. AL212] gi|325530509|gb|ADZ25230.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosomonas sp. AL212] Length = 482 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/465 (45%), Positives = 300/465 (64%), Gaps = 9/465 (1%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L K S+ EL ++Q I+ N + NA+I V + + A A+ +DK I G A L GI Sbjct: 12 QLAEKKFSSAELTTQFLQRIKQLNPEYNAFITVNEEISLAQAKAADKMIATGQAGPLTGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F KG T S +L F Y++ V ++ GA+ +GK NMDEFAMGSSNE Sbjct: 72 PIAQKDIFCAKGWLTTCGSRMLSNFVSPYDAGVIERFNQVGAINIGKTNMDEFAMGSSNE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TSYYG V +PW PGGSSGG++ AVA L A+ GTDTGGSIRQPA+ G Sbjct: 132 TSYYGMVKNPWDIAA-----VPGGSSGGAACAVAARLAPAATGTDTGGSIRQPAALCGIS 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYG SR G+I+FA SLDQ G + ++ D A+LL + G+D D+T + DY Sbjct: 187 GIKPTYGLVSRYGMIAFASSLDQGGPMAKSAEDLALLLNVMTGFDPRDSTSLQRDAEDYT 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + L + + G+ +G+PKEY + +S + ++ + + GA+ VE+SLP+T ++P Y Sbjct: 247 QDLQKPLAGLRIGLPKEYFAEGMSRDVANAIEKALIEYRKLGAQTVEVSLPNTSLSIPVY 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+++PAEASSNL+R+DGVRYG R D+ +MY TR+ GFG EVK RI+IGTYVLS Sbjct: 307 YVLAPAEASSNLSRFDGVRYGYRASSYSDLADMYRKTRAQGFGAEVKRRILIGTYVLSHG 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y++A+K+R LI +DFTEA++Q D+I+ PTTPT AF LG++ N+ M +D+ Sbjct: 367 YYDAYYIKAQKLRRLIAQDFTEAYKQ-CDIIMGPTTPTVAFNLGEKSNDPIQM--YLSDI 423 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +T A N+AG+PA+S+P +K P+GL ++G F+E + ++ Sbjct: 424 YTSAANLAGMPAMSIPIGFGDKNRPIGLHIMGNYFKEAQMLNIAH 468 >gi|327479577|gb|AEA82887.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas stutzeri DSM 4166] Length = 488 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/478 (47%), Positives = 315/478 (65%), Gaps = 10/478 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + ++ + ++E L K SA EL + + IE + Q+N++I V + A A A+ +D Sbjct: 4 TAMHNLTLAEIARNLAEKRFSAEELTRTLLARIEQLDPQLNSFISVTDELAIAQAKAADA 63 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R G+ L G PIG KD F T+GI T S ILD F+ Y++TV ++L G V LGK Sbjct: 64 RRAAGENGALLGAPIGHKDLFCTQGIRTSCGSRILDSFKAPYDATVVERLAAAGTVTLGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGS+NE+SYYG V +PW PGGSSGGS+AA+A L A+ GTDTG Sbjct: 124 LNMDEFAMGSANESSYYGAVKNPWDL-----SRVPGGSSGGSAAAIAARLLPAATGTDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T G+KPTYGR SR G++++A SLDQ G + RT D A+LL A+AG+D Sbjct: 179 GSIRQPAALTNLTGLKPTYGRVSRWGMVAYASSLDQGGPMARTAEDCALLLSAMAGFDPK 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V P+ DY AL Q + G+ +G+PKEY L P I + LK GA + + Sbjct: 239 DSTSVEQPLDDYLAALSQPLAGLRIGLPKEYFGAGLDPKIADAVMASVEELKRLGATVKD 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVK 360 ISLP+ Q+A+P+YY+I+PAEASSNL+R+DGVR+G R E D+ ++Y+ +R+ GFG EVK Sbjct: 299 ISLPNMQHAIPSYYVIAPAEASSNLSRFDGVRFGYRCENPVDLTDLYKRSRAEGFGDEVK 358 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A+KIR LIK+DF AFEQ VD+IL PTTP A+ LG E Sbjct: 359 RRIMVGTYALSAGYYDAYYLKAQKIRRLIKQDFVAAFEQ-VDLILGPTTPNLAWKLG--E 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N+ + D++T+ N+AG+P +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 KNADPVSAYLEDIYTITANLAGIPGLSMPAGFID-GLPVGVQLLAPYFQEARLLNVAH 472 >gi|152986893|ref|YP_001350433.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas aeruginosa PA7] gi|166217700|sp|A6VBJ8|GATA_PSEA7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|150962051|gb|ABR84076.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa PA7] Length = 484 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/476 (48%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + ++E L K SA EL + + I + Q+N++I V A A A+ +D+R Sbjct: 2 LHQLTLAEIARALADKRFSAEELTRTLLGRIRQLDPQLNSFISVTDDLAIAQAKAADERR 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+G+ T S +LD F Y++TV +KL G V LGKLN Sbjct: 62 ANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLAAAGTVTLGKLN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSN++S+YG V +PW S+D PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 122 MDEFAMGSSNQSSHYGAVKNPW-SLDRV----PGGSSGGSAAAVAARLLPAATGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T GIKPTYGR SR G+I++A SLDQ G + RT D A++L A+AG+D D+ Sbjct: 177 IRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGAMAGFDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V PV DY AL + + G+ +G+PKEY L I + LK GA + +IS Sbjct: 237 TSVEQPVDDYLAALQKPLSGLRIGLPKEYFGAGLDSRIADAVLAVVEELKKLGATVKDIS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVRYG R + LE +Y+ +R+ GFG EVK+R Sbjct: 297 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRYGYRCDAPQNLEDLYKRSRAEGFGSEVKNR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G E N Sbjct: 357 IMVGTYALSAGYYDAYYLQAQKIRRLIKNDFVNAFAE-VDVILGPTTPNPAWKIG--EKN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 414 DDPVSQYLEDIYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 468 >gi|87124234|ref|ZP_01080083.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. RS9917] gi|86167806|gb|EAQ69064.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. RS9917] Length = 487 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 221/485 (45%), Positives = 313/485 (64%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 MA++E R +L ++S+ EL D ++ I + ++A+++V A++ARA A+ D G Sbjct: 1 MAIAEWRQQLERGEVSSRELTDHHLARIAAVDPSLHAFLDVTAERARADADRIDAARQAG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++ L G+P+ IKD T+G+ T S +L+ F P YESTVT++LW +GAV+LGK N+D Sbjct: 61 ESLPPLAGVPLAIKDNLCTRGVRTTCASRMLEHFVPPYESTVTERLWRSGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +GP +PW + PGGSSGGS+AA+A C A++G+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGPTGNPWNL-----EHVPGGSSGGSAAALAAGECMAALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G T TV D+A LL+ +AG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRISRYGLVAFASSLDQVGPFTSTVADAAALLQVMAGSDPLDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVPDY L I G+ VG+ +E + + L P + + L+ GA +V++S Sbjct: 236 LRAPVPDYSATLADPIDGLRVGLVRECFDQEGLDPEVKASVLAAAEQLQALGADLVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E D L M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRAEDADSLASMTARSRAEGFGAEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI++DF A+ Q VDV+LTPT PT++F G ++ Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRQDFDAAYRQ-VDVLLTPTAPTTSFRRGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ N+AGLPAISVP E +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLADLLTIPANLAGLPAISVPCGFDEAGLPIGVQLIGNVLEEPRLLQVAHQYEQA 472 Query: 484 AGYFR 488 A + Sbjct: 473 AAVMQ 477 >gi|315151573|gb|EFT95589.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0012] Length = 489 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 315/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKALELAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + P + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQPDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|113954926|ref|YP_730836.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. CC9311] gi|123327779|sp|Q0I9N6|GATA_SYNS3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|113882277|gb|ABI47235.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Synechococcus sp. CC9311] Length = 487 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/481 (46%), Positives = 316/481 (65%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 MA++E R +L S ++SA EL D ++ I+ +S ++A++EV A +ARA A+ D+ R Sbjct: 1 MAIAEWRQQLESGEVSARELTDHHLARIKAVDSSVHAFLEVTADRARADADRLDEARAAG 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+PI IKD TKGI T + S +L+ F P YESTVT +LW +GAV++GK N+D Sbjct: 61 EDLPPLAGVPIAIKDNLCTKGIRTTSSSRMLESFVPPYESTVTDRLWRSGAVLIGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +GP +PW + + PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGPTANPWNT-----GYVPGGSSGGSAAAVAAGECMASLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G +V D+A LL+AIAG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFATSVSDAAELLQAIAGEDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVP+Y L +S+ G+ +G+ +E + + + P + + L+ GA++V++S Sbjct: 236 LKAPVPNYREVLGRSVSGLRIGVVRECFDQEGIDPQVKASVLAAAELLQSLGAELVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R E + M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAEDASSLASMTARSRTEGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF VDV+LTPT P++AF G ++ Sbjct: 356 LIGTYALSAGYVDAYYRKAQQVRTLIRRDFETAFAS-VDVLLTPTAPSTAFAAGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ N+AGLPAI+VP + +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLADLLTIPANLAGLPAINVPCGFDSEGLPIGVQLIGNVLEEPLLLQVAHQYEQS 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|191638000|ref|YP_001987166.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus casei BL23] gi|227535463|ref|ZP_03965512.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|229485888|sp|B3WD57|GATA_LACCB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|190712302|emb|CAQ66308.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Lactobacillus casei BL23] gi|227186873|gb|EEI66940.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327382076|gb|AEA53552.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus casei LC2W] gi|327385220|gb|AEA56694.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus casei BD-II] Length = 484 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/481 (46%), Positives = 316/481 (65%), Gaps = 11/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + ++LRS +++ +LVD + I +++++A++ + A A+ A D I Sbjct: 7 SIDQLHEQLRSGKVTSSQLVDETLAGINQLDAEVDAFLALNADGAKEKAAAVDAAGIAD- 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PI IKD TKG+ T A S +L F P Y++TV QKL GA+ +GK NMDEF Sbjct: 66 DQPLAGVPIAIKDNIVTKGVVTTAASKMLANFNPIYDATVMQKLDAAGAINVGKTNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + + W D T PGGSSGGS+AAVA A++G+DTGGSIRQP Sbjct: 126 AMGSSTENSAFKTTKNAW---DHTR--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+I+F+ SLDQ G +TR V+D+A LL IAG+DE D+T + Sbjct: 181 AAFNGIVGVKPTYGRVSRWGLIAFSSSLDQIGTLTRHVKDAAQLLNVIAGHDERDSTTAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 PVPD+ + Q I+GM + +PKEY + P + + +D GA + E+SLPHT Sbjct: 241 TPVPDFTAKIGQDIKGMKIALPKEYLGKGVDPAVADKIKAAAKQFEDMGATVTEVSLPHT 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 QYA+P+YYII+ +EASSNL R+DG+RYG R + K+I ++Y +RS GFG EVK RIM+G Sbjct: 301 QYAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVKNIEDVYVRSRSEGFGPEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD+++ +A ++RTLI RDF + F+ D+I+ PTTPT AF +G++ + +M Sbjct: 361 TFSLSAGFYDAYFKKAGQVRTLITRDFEDVFKD-YDLIIGPTTPTVAFKIGEKVTDPVTM 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AGLPA SVPA + MP+GLQLIG+ F E T+F V E + Y Sbjct: 420 --YMNDILTIPVNLAGLPAASVPAGFVD-GMPVGLQLIGKHFDESTIFQVAAAFEAQNDY 476 Query: 487 F 487 Sbjct: 477 L 477 >gi|291280323|ref|YP_003497158.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Deferribacter desulfuricans SSM1] gi|290755025|dbj|BAI81402.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Deferribacter desulfuricans SSM1] Length = 486 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/470 (46%), Positives = 308/470 (65%), Gaps = 8/470 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + L +K ISA EL Y+ I+N ++++++Y+ + A +KR Sbjct: 8 INELKTLLETKQISAYELNKFYLDRIKNIDTKIDSYLYLNESILDEAKIIDEKRARGEKL 67 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + GIPI IKD TKG+ T S IL+ F Y +TV + L + G ++LGKLNMDEFA Sbjct: 68 PEYAGIPIAIKDNMVTKGMPTTCASKILENFDSPYNATVVELLKEKGFLILGKLNMDEFA 127 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E SYY +PW + PGGSSGGS+AAVA L A++G+DTGGSIRQPA Sbjct: 128 MGSSCENSYYKKTKNPWDL-----ERVPGGSSGGSAAAVAARLAPATLGSDTGGSIRQPA 182 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G+KPTYGR SR G+++FA SLDQ G +T V DSA+LL I +DE D+T Sbjct: 183 SLCNVCGLKPTYGRVSRYGLVAFASSLDQIGPLTHNVEDSALLLSIIGKHDEKDSTSAKF 242 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY L++ I+G+ +G+PKE+ + + P + + + I + G +I EISLPHT+ Sbjct: 243 ESKDYTANLNKDIKGLKIGVPKEFFGEGIQPEVKEKVLEAIKQFESLGCEIKEISLPHTE 302 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 YA+ YYII+ AEASSNLARYDGVRYG R E + +++MYE TRSIGFG EVK RIM+GTY Sbjct: 303 YAVAVYYIIATAEASSNLARYDGVRYGFRAEAEGLIDMYEKTRSIGFGDEVKRRIMLGTY 362 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ YD++YL+A+K+RTLIK D+ AF++ VDVI+TPT+PT+AF +G E +S + Sbjct: 363 VLSAGYYDAYYLKAQKVRTLIKNDYLNAFKE-VDVIITPTSPTTAFKIG--EKSSDPLQM 419 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D++T+++N+ G IS+P +P+GLQ++G F EE + ++ Sbjct: 420 YLSDIYTISLNLFGGCGISIPCGFDNNNLPIGLQIMGNYFEEEKVLNLAH 469 >gi|114778059|ref|ZP_01452959.1| glutamyl-tRNA amidotransferase subunit A [Mariprofundus ferrooxydans PV-1] gi|114551665|gb|EAU54218.1| glutamyl-tRNA amidotransferase subunit A [Mariprofundus ferrooxydans PV-1] Length = 496 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/481 (46%), Positives = 325/481 (67%), Gaps = 12/481 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F ++SE + RL + + +AVE+ Y+ I N +NA++ + A A A+ SD Sbjct: 5 MPFSSLSEIKARLDAGETTAVEIAQLYLDRIATHNEALNAFVHLDADHVLAQAQASDAYR 64 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 R LEG+PI +KD F T+ T+ CS+ILDGF Y++ V +L + GAV++GK N Sbjct: 65 AKHAPRPLEGLPIAVKDIFCTQDGPTRCCSNILDGFNAPYDAHVITRLKEAGAVLVGKTN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS ETS +G +PW PGGSSGGS++AVA L A++GTDTGGS Sbjct: 125 MDEFAMGSSTETSAFGVCRNPWDV-----SRIPGGSSGGSASAVAAALTPAALGTDTGGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G G+KPTYGR SR GII+FA SLDQAG +TR+VRD+A++ A++G+D DA Sbjct: 180 IRQPAALCGITGLKPTYGRVSRRGIIAFASSLDQAGPMTRSVRDAAMVTAAMSGHDSGDA 239 Query: 244 TCV-NLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 T V + P D+ A D++ ++G+ +G PKEY +D + + + + + + GA+IV+ Sbjct: 240 TSVSDAPELDWLAACDKTDMKGLRIGKPKEYFVDGMDAGVRASVEAALKQCEALGAEIVD 299 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 ISLPHT+YA+ YY+I+P+EAS+NL+RYDGVR+G R E +D+L+MY +R GFG EVK Sbjct: 300 ISLPHTEYAVATYYVIAPSEASANLSRYDGVRFGRRCDEPEDLLDMYTRSRDEGFGSEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+ G + LSS YD++YL+A+++RTLI++DF +AFEQ VDVI TPT+P +AF +G++ Sbjct: 360 RRILTGAFALSSGYYDAYYLKAQQVRTLIQQDFLQAFEQ-VDVIATPTSPVTAFAVGEKT 418 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M D+FT+A+N+AGLP +S P + + +P+GLQ I +RE+ L Sbjct: 419 DDPLTM--YLADIFTLALNLAGLPGLSQPCGMVD-GLPVGLQWIAPAWREDVLLGAASAY 475 Query: 481 E 481 E Sbjct: 476 E 476 >gi|325125242|gb|ADY84572.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 480 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/477 (47%), Positives = 307/477 (64%), Gaps = 17/477 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D+L+S +SA +LV I I+ ++ ++NA+I V + AE+ D L Sbjct: 12 NDKLKSGAVSADQLVKDTIANIKKTDEKINAFITV--DEDAKPAEDLDFN------NKLA 63 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD T G+ T A SHIL F P YESTV KL A ++GK NMDEFAMGSS Sbjct: 64 GVPIAIKDNIITNGLKTTAASHILYNFEPVYESTVVAKLKAAQATIIGKTNMDEFAMGSS 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSY+G +PW + +K PGGSSGGS+AAVA A++G+DTGGSIRQPASF G Sbjct: 124 TETSYFGDTKNPW----NLNK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNG 178 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 GIKPTYGR SR G+I+FA SLDQ G++++ V+DSA +L IAG D+ DAT VPD Sbjct: 179 IFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAGADDRDATVSEKEVPD 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y L + ++G+ V +PKEY D + + K + I L+ GA I E+SLPHT+Y +P Sbjct: 239 YTSFLGKDVKGLRVAVPKEYMSDAVEEGVRKAVEAQIELLRANGAIINEVSLPHTKYVVP 298 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ +EAS+NL RYDG+RYG R E K++ E++ +RS GFG EVK RIM+G++ LS+ Sbjct: 299 TYYIIASSEASANLERYDGIRYGYRAEAKNLDEVFLKSRSEGFGDEVKRRIMLGSFALSA 358 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD +L+A K+RTLI +DF + FE DVI+ P + +AF L E ++ M + ND Sbjct: 359 GAYDKFFLQAAKVRTLICQDFDKIFEDN-DVIVGPVSTETAFDLNSEISDQIKMYN--ND 415 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + T++ NMAG+PA SVPA L E MP+G Q++ + F E +F V IE+ ++ Sbjct: 416 ILTISANMAGIPAASVPAGLSETTGMPVGFQIMAKRFDEGHVFQVADFIERSNKFYE 472 >gi|257126971|ref|YP_003165085.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leptotrichia buccalis C-1013-b] gi|257050910|gb|ACV40094.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Leptotrichia buccalis C-1013-b] Length = 487 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/485 (46%), Positives = 319/485 (65%), Gaps = 16/485 (3%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 SE + +++K+I++ E+ +++ I++ ++ A+ + +KA A + D+ N + R Sbjct: 9 SELAEMIKNKEITSEEVTRNFLDRIKSVEDKVGAFSNIFEEKALEQARKIDEEN-NEEGR 67 Query: 70 D------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 L G+P+ +KD +KG T A S IL + Y++TV +KL + GAV++GK N Sbjct: 68 KKYENTGLFGVPVALKDNIVSKGDLTTAASQILKNYVGVYDATVVKKLKEAGAVLVGKAN 127 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +PW + PGGSSGGS+AAVA ++GTDTGGS Sbjct: 128 MDEFAMGSSNENSSIKSASNPWDL-----ERVPGGSSGGSAAAVAAGEVPVALGTDTGGS 182 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPAS TGTVGIKPTYGR SR G+++F SLDQ G + ++ D A +++ I+GYDE D Sbjct: 183 IRQPASLTGTVGIKPTYGRVSRYGLMAFGSSLDQIGALAKSSEDLARIMQIISGYDENDP 242 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ VPDY L++ I+G+ +G+PKEY D L +I + + + LK GA++ E+S Sbjct: 243 TTADVEVPDYVSLLEKDIKGLKIGLPKEYFSDELDKSIKEVVDKTVETLKKLGAEVKEVS 302 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP+T+YA+ YYIIS AEA+SNL+RYDGVRYG+R ++I EMY +R+ GFG EVK RI Sbjct: 303 LPYTKYAISTYYIISSAEAASNLSRYDGVRYGVRKSDENIEEMYVKSRTEGFGDEVKRRI 362 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 MIG YVLSS YD++Y +A ++R LI+ DF + VD+ILTP +PT+AF G++ + Sbjct: 363 MIGNYVLSSGFYDAYYKKASQVRRLIRDDFLRVLSE-VDLILTPVSPTTAFKKGEKVTDP 421 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 M D+FTV++NMAGLPAISVPA +P+G+QLIG FRE+ LF+V EKE Sbjct: 422 VQM--YLGDIFTVSINMAGLPAISVPAGFV-NGLPVGIQLIGNYFREDLLFNVANRFEKE 478 Query: 484 AGYFR 488 G + Sbjct: 479 RGEIK 483 >gi|289548231|ref|YP_003473219.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Thermocrinis albus DSM 14484] gi|289181848|gb|ADC89092.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermocrinis albus DSM 14484] Length = 482 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/482 (43%), Positives = 305/482 (63%), Gaps = 15/482 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V E LR ++ E+V S+ + + ++ AYI + +A A++ D+ Sbjct: 6 SVVEILQLLRKGEVKPSEVVQSFYERFLATEDKVKAYITPLYHEALEVAKKLDQE--KPS 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP+ +KD +G T S IL+ + Y++ V ++L + GA+++GK NMDEF Sbjct: 64 HRPLYGIPVAVKDNINVEGTRTTCASRILENYVSPYDAEVIRRLKEAGAIVVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + P +PW + PGGSSGGS+ AVA S+G+DTGGSIRQP Sbjct: 124 AMGSSTEYSAFFPTRNPWDTGR-----VPGGSSGGSAVAVAVLSAPLSLGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G +G+KPTYGR SR G+++FA SLDQ G R D A++L+ I+GYD D+T Sbjct: 179 ASFCGVLGLKPTYGRVSRYGLVAFASSLDQIGPFARRTEDMALILEVISGYDPKDSTSAP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VP Y + + I+G+ VG+P+E+ + + + + + WL+ G ++ E+SLPH Sbjct: 239 KEVPRYTEEIKKDIKGLKVGVPREFTEYPVEEGVKEIFDNFLRWLEKNGCEVTEVSLPHV 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIG 366 +Y++PAYY+I+P+EASSNLARYDGVRYG R + + I E+Y TR GFG EVK RI++G Sbjct: 299 KYSIPAYYVIAPSEASSNLARYDGVRYGYRAKDYNSIEELYAKTRDEGFGPEVKRRILLG 358 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD++YL+A K+R LI+RDF EAF + VD+I++PT+PT AFP G+ + M Sbjct: 359 TFALSAGYYDAYYLKAMKVRALIRRDFEEAFRK-VDLIVSPTSPTVAFPFGERTQDPIQM 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+FTV+VN+A LP +S+PA + +P+G+QLIG+ F E L V E Y Sbjct: 418 --YLSDIFTVSVNLANLPGLSIPAGMW-NGLPVGVQLIGKAFDEALLLRVSYAWEH---Y 471 Query: 487 FR 488 +R Sbjct: 472 YR 473 >gi|78779237|ref|YP_397349.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Prochlorococcus marinus str. MIT 9312] gi|109891968|sp|Q31B32|GATA_PROM9 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78712736|gb|ABB49913.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Prochlorococcus marinus str. MIT 9312] Length = 480 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/485 (46%), Positives = 315/485 (64%), Gaps = 11/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R ++ +K S ELV+ I++ + ++N+YI A AE DK I N Sbjct: 1 MDFNSLRKKIITKKASVKELVNDIFLKIDSDDPEINSYICTTKDNAIQQAENIDKLIQNE 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI IKD TKG+HT S +L GF YEST + KLW +G + LGK N+D Sbjct: 61 EILPPLAGMPIAIKDNICTKGVHTTCASKMLKGFIAPYESTASDKLWSSGGICLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A+VA LC+A+IG+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGVTSNPWDI-----SRVPGGSSGGSAASVAAGLCSAAIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G IT TV D+A +L +I+G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPLDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP+Y L++SI+ + +GI KE + L+ + + G+ K+ GA+I+E+ Sbjct: 236 LDQPVPNYLINLNKSIKDLKIGIIKECFEHPGLNTEVKDSVLCGVERFKNLGAEIIEVEC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R EG ++++M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRSEEGSNLIDMTSKSRAEGFGDEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+K+RTLI+ DF +AF++ VD++LTPT PT+AF G N+ Sbjct: 356 LIGTYALSAGYSDAYYKKAQKVRTLIRNDFDKAFKK-VDILLTPTCPTTAFLKGDFSNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM +D+ TV N+AGLPAIS+P K +P+GLQLIG E+ + + I E + Sbjct: 415 LSM--YLSDLLTVPANLAGLPAISIPCGFDTKGLPIGLQLIGNVLEEDKILNAAHIFEID 472 Query: 484 AGYFR 488 A + Sbjct: 473 AQVIK 477 >gi|104773606|ref|YP_618586.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122397359|sp|Q1GBF4|GATA_LACDA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|103422687|emb|CAI97300.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 480 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/477 (47%), Positives = 307/477 (64%), Gaps = 17/477 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D+L+S +SA +LV I I+ ++ ++NA+I V + AE+ D L Sbjct: 12 NDKLKSGAVSADQLVKDTIANIKKTDEKINAFITV--DEDAKPAEDLDFN------NKLA 63 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD T G+ T A SHIL F P YESTV KL A ++GK NMDEFAMGSS Sbjct: 64 GVPIAIKDNIITNGLKTTAASHILYNFEPVYESTVVAKLKAAQATIIGKTNMDEFAMGSS 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSY+G +PW + +K PGGSSGGS+AAVA A++G+DTGGSIRQPASF G Sbjct: 124 TETSYFGDTKNPW----NLNK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNG 178 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 GIKPTYGR SR G+I+FA SLDQ G++++ V+DSA +L IAG D+ DAT VPD Sbjct: 179 IFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAGADDRDATVSEKEVPD 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y L + ++G+ V +PKEY D + + K + I L+ GA I E+SLPHT+Y +P Sbjct: 239 YTSFLGKDVKGLRVAVPKEYMSDAVEEGVRKEVEAQIELLRANGAIINEVSLPHTKYVVP 298 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ +EAS+NL RYDG+RYG R E K++ E++ +RS GFG EVK RIM+G++ LS+ Sbjct: 299 TYYIIASSEASANLERYDGIRYGYRAEAKNLDEVFLKSRSEGFGDEVKRRIMLGSFALSA 358 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD +L+A K+RTLI +DF + FE DVI+ P + +AF L E ++ M + ND Sbjct: 359 GAYDKFFLQAAKVRTLICQDFDKIFEDN-DVIVGPVSTETAFDLNSEISDQIKMYN--ND 415 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + T++ NMAG+PA SVPA L E MP+G Q++ + F E +F V IE+ ++ Sbjct: 416 ILTISANMAGIPAASVPAGLSETTGMPVGFQIMAKRFDEGHVFQVADFIERSNKFYE 472 >gi|162452557|ref|YP_001614924.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sorangium cellulosum 'So ce 56'] gi|161163139|emb|CAN94444.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sorangium cellulosum 'So ce 56'] Length = 517 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/482 (46%), Positives = 306/482 (63%), Gaps = 36/482 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++SA E+ + + IE + + A++ V ++A AAA D R G+A L G+PIG+ Sbjct: 21 EVSAEEVARAALSRIEQRDGALGAFLTVQGEQAVAAARALDARRARGEALGPLAGVPIGL 80 Query: 79 KDCFATKGIHTQACSHILD-----------------GFRPHYESTVTQKLWDNGAVMLGK 121 KD T+G T A S IL GFRP +++TV +L + GA++ GK Sbjct: 81 KDALCTEGAPTTAGSKILTRAAAGGDGASRAPDPARGFRPQFDATVVTRLREAGAILPGK 140 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSSNE S +GPV +PW PGGSSGGS+ AVA + S+G+DTG Sbjct: 141 CNMDEFAMGSSNENSAFGPVKNPW-----DPSRIPGGSSGGSAVAVAAGMTPGSLGSDTG 195 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS TG VGIKPTYGR SR G+I+FA SLDQ G + V+ +A LL+ I+G D Sbjct: 196 GSIRQPASLTGVVGIKPTYGRVSRYGLIAFASSLDQIGPFAQDVKGAARLLEVISGRDPR 255 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT ++ PV E A + + G+ +G+P+EY + ++ ++ I L+ G +I Sbjct: 256 DATSLDAPVGACEAACGRDVAGLRIGVPEEYFAKGIDARVEAKVREAIEGLRGLGCEIKP 315 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-----KDILEMYENTRSIGFG 356 + LPHT+YA+ AYYI++ AEASSNLAR+DGVR+GLRVEG D+ +Y TR GFG Sbjct: 316 VRLPHTRYAVAAYYIVATAEASSNLARFDGVRFGLRVEGDRGGKADLQGLYGRTRGEGFG 375 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +EVK RI++GTYVLS+ YD++YLRA+K+RTLI+RDF EAF + VD+I P +PT AF L Sbjct: 376 REVKRRILLGTYVLSAGYYDAYYLRAQKVRTLIRRDFDEAFRE-VDLIAAPVSPTVAFRL 434 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK-----KMPLGLQLIGQPFREE 471 G+ ++ SM DV+T+ +MAGLPAISVP A + +P+GLQLIG E Sbjct: 435 GERVDDPLSM--YLADVYTLPASMAGLPAISVPCATAQAPDGGPPLPVGLQLIGPALEEA 492 Query: 472 TL 473 L Sbjct: 493 RL 494 >gi|89097070|ref|ZP_01169961.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. NRRL B-14911] gi|89088450|gb|EAR67560.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. NRRL B-14911] Length = 485 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 318/482 (65%), Gaps = 11/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 VSE + L K+IS +LV+ + I +SQ+ A++ + ++AR A+ D+++ ++ Sbjct: 8 VSELHELLHKKEISVSDLVEQSFKRIGEVDSQVGAFLTLNEEEARRQAKRLDEKLGTEES 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PIGIKD TKG+ T + S IL+ F P Y +TV L + + +GKLNMDEF Sbjct: 68 KGLLFGMPIGIKDNIVTKGLRTTSASKILEDFDPIYNATVMDHLHNAETITIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 128 AMGSSNENSGFGNVRNPWNL-----EKVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KPTYGR SR G+++FA SLDQ G ITR V D+A LL+AI+G D D+T + Sbjct: 183 ASYCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNAYLLQAISGLDPNDSTSAD 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +PV Y AL ++G+ + +PKEY + + + ++ + L++ GA E+SLPH+ Sbjct: 243 VPVDHYAGALTGDVKGLRIAVPKEYLAEGVDEEVRQSVLDALKVLENLGAVWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL AYY++S +EAS+NLAR+DGVRYG R + + ++E+Y+ +R+ GFG EVK RIM+G Sbjct: 303 KYALAAYYLLSSSEASANLARFDGVRYGYRSPDAETLMELYKKSRAQGFGDEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+K+RTLIK+DF E F Q DVI+ PT PT AF +G EN + Sbjct: 363 TFALSSGYYDAYYKKAQKVRTLIKKDFEEVF-QSYDVIIGPTAPTPAFNIG--ENIDDPL 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG PAISVP MPLGLQ+IG+ F E T++ E+ + Sbjct: 420 TMYANDILTIPVNLAGAPAISVPCGYS-NGMPLGLQIIGKYFDESTIYRTAHAFEQATDF 478 Query: 487 FR 488 + Sbjct: 479 HK 480 >gi|227517691|ref|ZP_03947740.1| possible amidase [Enterococcus faecalis TX0104] gi|227074846|gb|EEI12809.1| possible amidase [Enterococcus faecalis TX0104] Length = 489 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 315/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQSDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|229551871|ref|ZP_04440596.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Lactobacillus rhamnosus LMS2-1] gi|258539289|ref|YP_003173788.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus rhamnosus Lc 705] gi|229314815|gb|EEN80788.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Lactobacillus rhamnosus LMS2-1] gi|257150965|emb|CAR89937.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/480 (46%), Positives = 314/480 (65%), Gaps = 11/480 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + ++LRS +++ +LVD + I+ + ++ A++ + A A+ A D+ I D Sbjct: 8 LDQLHEQLRSGKLTSRQLVDETLAGIDKIDPEVAAFLAINADGAKKQAAAIDEAGI-ADD 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L G+PI IKD TKG+ T A S IL+ F P Y++TV QKL GA+ +GK N+DEFA Sbjct: 67 QPLSGVPIAIKDNIVTKGVVTTAASKILENFNPIYDATVMQKLAAAGAINVGKTNLDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + + W PGGSSGGS+AAVA A++G+DTGGSIRQPA Sbjct: 127 MGSSTENSAFKTTKNAWDH-----SRVPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG KPTYGR SR G+I+F+ SLDQ G +TR V+D+A +L IAG+DE D+T + Sbjct: 182 AFNGIVGFKPTYGRVSRWGLIAFSSSLDQIGTLTRGVKDAAQILNVIAGHDERDSTTADT 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPD+ + QSI+GM + +PKEY + + P + + L+ GA + E+SLPHTQ Sbjct: 242 PVPDFTAKIGQSIKGMKIALPKEYLGEGVDPEVAAKIKAAAKQLEALGATVSEVSLPHTQ 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 YA+P+YYII+ +EASSNL R+DG+RYG R + +I ++Y +RS GFG EVK RIM+GT Sbjct: 302 YAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVHNIEDVYVRSRSEGFGPEVKRRIMLGT 361 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 + LS+ YD+++ +A ++RTLI RDF FE D+I+ PTTPT AF +G++ + +M Sbjct: 362 FSLSAGFYDAYFKKAGQVRTLITRDFEAVFED-YDLIIGPTTPTVAFKIGEKVTDPVTM- 419 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 ND+ T+ VN+AGLPA SVPA + +P+GLQLIG+ F E T+F V E + Y Sbjct: 420 -YMNDILTIPVNLAGLPAASVPAGFVD-GLPVGLQLIGKHFDESTIFQVAAAFEAQNDYL 477 >gi|169831195|ref|YP_001717177.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Desulforudis audaxviator MP104C] gi|229485897|sp|B1I3K2|GATA_DESAP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169638039|gb|ACA59545.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Candidatus Desulforudis audaxviator MP104C] Length = 492 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/478 (47%), Positives = 310/478 (64%), Gaps = 11/478 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDL 71 R+ L +++SA EL S + I+ ++ AY+ + + A A D+ + NG + L Sbjct: 12 RELLLGREVSAAELCRSVLNRIDEVEGRVKAYVTLDREGALRQAAAVDRELQNGRELPPL 71 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP IKD +G+ S IL + P Y++TV +KL D V+LGK NMDEFAMGS Sbjct: 72 AGIPFAIKDNICLRGLPATCSSKILHNWVPPYDATVVEKLKDQQTVILGKTNMDEFAMGS 131 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S + +PW K PGGSSGGS+AAVA ++G+DTGGSIRQPASF Sbjct: 132 STEHSAFFTTRNPW-----DPKRVPGGSSGGSAAAVAAGSAICALGSDTGGSIRQPASFC 186 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYG SR G+++FA SLDQ G +TR V D A+++ AI G+D D+T V VP Sbjct: 187 GVVGMKPTYGLVSRYGLVAFASSLDQIGPLTRDVTDCALVMNAICGHDHRDSTSVPKEVP 246 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 D+ L ++GM +G+P+EY L + + + +S ++ GA + E SLPHT+YAL Sbjct: 247 DFTSFLVDDVKGMRIGLPREYFPAELDDGVRRIVMEAVSVFEERGAYVEETSLPHTEYAL 306 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 P YY+I+PAEASSNLARYDGVRYG R E +D+L+M+ +RS GFG EVK RIM+GTY L Sbjct: 307 PVYYLIAPAEASSNLARYDGVRYGYRAPECEDVLDMFRVSRSRGFGAEVKRRIMLGTYAL 366 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S+ YD++YL+A K+RTLI+RDF EAFE+ DV+L+PT P +AF +G + + M Sbjct: 367 SAGYYDAYYLKALKVRTLIRRDFEEAFEK-FDVLLSPTAPETAFIIGAKTEDPIRM--YL 423 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +D+FT+AVN+AGLP +SVPA +P+G+Q IG+PF E TL +G ++ + R Sbjct: 424 SDIFTLAVNLAGLPGMSVPAGFV-AGLPVGIQFIGKPFAEGTLLRMGYAFQQSTDHHR 480 >gi|15599679|ref|NP_253173.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas aeruginosa PAO1] gi|254238856|ref|ZP_04932179.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa C3719] gi|254244704|ref|ZP_04938026.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa 2192] gi|23821637|sp|Q9HVT8|GATA_PSEAE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|9950721|gb|AAG07871.1|AE004862_5 Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa PAO1] gi|126170787|gb|EAZ56298.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa C3719] gi|126198082|gb|EAZ62145.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa 2192] Length = 484 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/476 (47%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + ++E L K SA EL + + I + Q+N++I + A A A+ +D+R Sbjct: 2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+G+ T S +LD F Y++TV +KL GAV LGKLN Sbjct: 62 ANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSN++S+YG V +PW S+D PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 122 MDEFAMGSSNQSSHYGAVKNPW-SLDRV----PGGSSGGSAAAVAARLLPAATGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T GIKPTYGR SR G+I++A SLDQ G + RT D A++L +AG+D D+ Sbjct: 177 IRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V PV DY AL + + G+ +G+P+EY L I + LK GA + +IS Sbjct: 237 TSVEQPVDDYLAALQKPLSGLRIGLPREYFGAGLDSRIADAVLAVVEELKTLGATVKDIS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVRYG R + LE +Y+ +R+ GFG EVK+R Sbjct: 297 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRYGYRCDAPQNLEDLYKRSRAEGFGSEVKNR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G E N Sbjct: 357 IMVGTYALSAGYYDAYYLQAQKIRRLIKNDFVSAFAE-VDVILGPTTPNPAWKIG--EKN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 414 DDPVSQYLEDIYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 468 >gi|107099932|ref|ZP_01363850.1| hypothetical protein PaerPA_01000953 [Pseudomonas aeruginosa PACS2] Length = 484 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/476 (47%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + ++E L K SA EL + + I + Q+N++I + A A A+ +D+R Sbjct: 2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+G+ T S +LD F Y++TV +KL GAV LGKLN Sbjct: 62 ANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSN++S+YG V +PW S+D PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 122 MDEFAMGSSNQSSHYGAVNNPW-SLDRV----PGGSSGGSAAAVAARLLPAATGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T GIKPTYGR SR G+I++A SLDQ G + RT D A++L +AG+D D+ Sbjct: 177 IRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V PV DY AL + + G+ +G+P+EY L I + LK GA + +IS Sbjct: 237 TSVEQPVDDYLAALQKPLSGLRIGLPREYFGAGLDSRIADAVLAVVEELKTLGATVKDIS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVRYG R + LE +Y+ +R+ GFG EVK+R Sbjct: 297 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRYGYRCDAPQNLEDLYKRSRAEGFGSEVKNR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G E N Sbjct: 357 IMVGTYALSAGYYDAYYLQAQKIRRLIKNDFVSAFAE-VDVILGPTTPNPAWKIG--EKN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 414 DDPVSQYLEDIYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 468 >gi|170723445|ref|YP_001751133.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas putida W619] gi|229485999|sp|B1JDP1|GATA_PSEPW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169761448|gb|ACA74764.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas putida W619] Length = 483 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/476 (47%), Positives = 314/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L K S+ EL + + I+ + Q+N++I V + A A +D R Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIQQLDPQLNSFISVTEELALGQARAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G PI KD F T G+ T S +LD F+ Y++TV KL + G V LGK N Sbjct: 61 AAGETGALLGAPIAHKDLFCTNGVRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPATTGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY L+ S+QG+ +G+PKEY L P I + Q + L+ GA + EIS Sbjct: 236 TSIDEPVPDYSANLNASLQGLRIGLPKEYFGAGLDPRIAELVQASVKELEKLGAVVKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCDEPKDLTDLYKRSRGEGFGAEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++Y++A++IR LIK DF AFE GVD+IL PTTP A+ LG + + Sbjct: 356 IMVGTYALSAGYYDAYYVKAQQIRRLIKNDFMAAFE-GVDLILGPTTPNPAWKLGAK--S 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 413 SDPVAAYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|198283877|ref|YP_002220198.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668161|ref|YP_002426512.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248398|gb|ACH83991.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520374|gb|ACK80960.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 490 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/489 (45%), Positives = 312/489 (63%), Gaps = 9/489 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ ++ E R LR++D S+VEL ++ I N +NA++ V KA AAA +D R Sbjct: 2 ELHEFSLRELRQGLRNRDFSSVELTTVLLKRISALNPALNAFVTVTESKALAAAATADAR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L GIP+ KD F T G+ T S +L+ F Y +TV ++L G VMLGKL Sbjct: 62 RAAGEDGPLLGIPMAHKDIFCTTGVRTTCGSRMLEHFVAPYNATVVERLAAEGMVMLGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNETSY+GPV +PW + SSGGS+AAVA L + GTDTGG Sbjct: 122 NMDEFAMGSSNETSYFGPVRNPWHTGMVPGG-----SSGGSAAAVAAGLVPVATGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+ G GIKPTYGR SR G+I+FA SLDQ G + R D A+LL +A +D D Sbjct: 177 SIRQPAALCGVTGIKPTYGRVSRYGMIAFASSLDQGGTMARNAEDCALLLNVMAAHDPRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T D+ R L++ +QG+ VG+P+E+ L P + Q GI+ L GA + I Sbjct: 237 STSHPAAASDFLRGLERPLQGLRVGVPEEFFGAGLDPEVAAAVQAGIAELARQGAAVQSI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 LP+ +A+ YY+++PAEASSNLAR+DGVRY R D+ E+Y+ +R GFG EV+ Sbjct: 297 RLPNNPHAVSTYYVLAPAEASSNLARFDGVRYTHRAANPADLTELYQQSRYEGFGAEVRR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS+ YD++Y +A+++R+LI+ DF AF + VDVI+ PTTPT AFPLG + Sbjct: 357 RILVGTYVLSAGYYDAYYRKAQQVRSLIREDFRRAFAE-VDVIVGPTTPTPAFPLGAK-- 413 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+ + D++T+AVN+AG+PA+SVP +P+G+QL+G F ++ L +V + Sbjct: 414 NADPVAMYLADIYTIAVNLAGIPALSVPCGFTAAGLPVGMQLMGDYFADDLLLNVAHRYQ 473 Query: 482 KEAGYFRPH 490 +E + R H Sbjct: 474 QETQWHRAH 482 >gi|88800238|ref|ZP_01115806.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Reinekea sp. MED297] gi|88777084|gb|EAR08291.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Reinekea sp. MED297] Length = 428 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 206/425 (48%), Positives = 291/425 (68%), Gaps = 10/425 (2%) Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +DK I +G A L G+PI +KD F T+G+ T S +LD F YEST TQ+L D G V Sbjct: 2 ADKAIADGKAGPLTGLPIAVKDIFCTEGVKTSCGSKMLDNFIAPYESTATQRLKDAGFVT 61 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFAMGSS ETSYYG +PW +TD PGGSSGGS+ AVA + A++GT Sbjct: 62 LGKTNLDEFAMGSSTETSYYGATRNPW----NTDA-VPGGSSGGSAVAVAAGMAPAALGT 116 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+F G G+KPTYGR SR G+++F SLDQ G +T+T D+A+++ IAG+ Sbjct: 117 DTGGSIRQPAAFCGITGLKPTYGRVSRWGMVAFGSSLDQGGPMTQTAEDAAMIMNTIAGF 176 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+T ++ P DY LDQ + G+ +G+PKEY + L I + + + + GA Sbjct: 177 DPRDSTSMDQPTVDYTATLDQPLNGLKIGLPKEYFGEALDDGIRQAIMEAVKQFESLGAT 236 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 + EISLP T+ ++PAYYII+PAEAS+NL+R+DGV++G R + D+++MY TRS GFG Sbjct: 237 VKEISLPRTELSIPAYYIIAPAEASTNLSRFDGVKFGYRCDNPTDLMDMYTRTRSEGFGA 296 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTY LS+ YD++Y +A+++R LIK+DF A VDVI+ P TP++A+ +G Sbjct: 297 EVKRRIMVGTYALSAGYYDAYYRKAQQLRRLIKQDFQAALAD-VDVIMGPATPSTAWNIG 355 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + +M D++T++VN+AGLP +S+P + MP+GLQ+IG F E L ++G Sbjct: 356 EKTQDPVAM--YMEDIYTLSVNLAGLPGMSIPCGF-KDGMPVGLQVIGNYFDEARLLNIG 412 Query: 478 QIIEK 482 ++ Sbjct: 413 HQFQR 417 >gi|256004472|ref|ZP_05429452.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum DSM 2360] gi|255991613|gb|EEU01715.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum DSM 2360] gi|316941298|gb|ADU75332.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum DSM 1313] Length = 486 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/479 (47%), Positives = 310/479 (64%), Gaps = 11/479 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE RL+S++ISA+EL +YI AIE N +NAY+ + A AAE++D+R+ G A Sbjct: 5 ISELAKRLQSREISAMELTKAYIGAIEKLNPTINAYVYLTFDTAMKAAEKADQRLKEGGA 64 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD T G++T CS IL GF+P+Y++TV +KL +GAV+LGK NMDEFA Sbjct: 65 PLLCGIPMALKDNICTDGLNTTCCSKILKGFKPYYDATVWEKLKAHGAVLLGKTNMDEFA 124 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS++ETS YG ++P + + GGSSGGS+AAV L S+G+DTGGSIRQPA Sbjct: 125 MGSTSETSCYGAPLNPRNT-----NYVTGGSSGGSAAAVCANLAVYSLGSDTGGSIRQPA 179 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYG SR G+I++ SLDQ G +T +V+D+AI+ AI G D D T V+ Sbjct: 180 SFCGVVGLKPTYGAVSRYGLIAYGSSLDQIGPMTNSVKDAAIVFDAIKGGDRRDQTSVDY 239 Query: 249 PVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 Y LD+ ++GM +G+ +E+ D ++P I ++ I + GA I I LP Sbjct: 240 DYGSYLAECLDRDVKGMRIGVAEEF-FDGINPEIKSKIEEAIKLFERNGAVIENIRLPAL 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + ALP YYII+ AEASSNL RYDG+RYG R I +M TRS GFG EVK RIM+G Sbjct: 299 KLALPVYYIIACAEASSNLGRYDGIRYGYRTSSYTSIEDMIVKTRSEGFGDEVKRRIMLG 358 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TYVLSS YD++Y +A IR I R+F FE+ DV++ PT P +AFPL + +G + Sbjct: 359 TYVLSSGYYDAYYKKACLIREEINREFDAVFEK-CDVLVAPTAPNTAFPLNYK--GAGPV 415 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +D+ TV VN+AG+PAISVP +P+G+Q+IG+ F E T+ E+ AG Sbjct: 416 EMYLSDICTVPVNIAGVPAISVPCGEDSNGLPVGMQIIGKKFDEATVLQAAHFYEQSAG 474 >gi|269467793|gb|EEZ79551.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [uncultured SUP05 cluster bacterium] Length = 480 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/474 (46%), Positives = 311/474 (65%), Gaps = 13/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+ K+ S+VEL Y+ I + SQ+NA+I V A A+ +D++I + +A L GIP Sbjct: 13 LKDKEFSSVELTQHYLNRI--NQSQLNAFITVTDDLAMKQAQAADEKIASNNANILTGIP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 KD F T+G+ T A S +LD F Y++TV+ +L + VMLGK NMDEFAMGSSNE Sbjct: 71 YAHKDIFCTQGVKTSAGSKMLDNFISPYDATVSHQLNNADLVMLGKSNMDEFAMGSSNEN 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SYYG V +PW D T PGGSSGGS+AAVA L A + GTDTGGSIRQPAS G G Sbjct: 131 SYYGSVKNPW---DVTK--IPGGSSGGSAAAVAARLSAFATGTDTGGSIRQPASLCGITG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I++A SLDQAG +T+T D+A++L ++G+DE D+T V DY Sbjct: 186 LKPTYGRVSRYGMIAYASSLDQAGPMTQTAEDAALVLNVMSGFDEKDSTSAEQDVQDYTA 245 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ SI+G+T+G+PKE+ + L + + + GA + E+SLP++ YA+P YY Sbjct: 246 NLNDSIKGLTIGLPKEFFSEGLDNEVADNVMAAVKEFEAMGATVKEVSLPNSAYAIPTYY 305 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I++P E SSNL+R DGVRYG R E KD+ ++Y +RS FG+EVK RIMIG Y LS+ Sbjct: 306 IVAPCECSSNLSRLDGVRYGYRCEEPKDLEDLYLRSRSEAFGEEVKRRIMIGAYALSAGY 365 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD+ YL+A+K R LI DF +AFE VDVI+ P +PT+AF LG ++ + D++ Sbjct: 366 YDAFYLKAQKTRHLISDDFKKAFEN-VDVIMGPVSPTTAFDLGSVKD---PVSMYLADIY 421 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AGLP +S+PA + +P+GLQLIG + E L ++ +++ + + Sbjct: 422 TLSANLAGLPGMSIPAGFAQ-NLPVGLQLIGNYWSESKLLNIAHQFQQQTDWHQ 474 >gi|170017690|ref|YP_001728609.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Leuconostoc citreum KM20] gi|169804547|gb|ACA83165.1| Glutamyl-tRNA(Gln) amidotransferase, A subunit [Leuconostoc citreum KM20] Length = 489 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/477 (46%), Positives = 312/477 (65%), Gaps = 12/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + L +K +A EL + ++ IE ++ +++A+I + A + AE D++ A L Sbjct: 15 HNALLNKQFTASELTKATLEKIEKTDDKLHAFIMTNPEIALSQAESIDEK--QDFAHVLS 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD ATKGI T S IL+GF+P Y++TV +KL +GA+ +GK NMDEFAMG S Sbjct: 73 GLPLALKDNLATKGIETTGASKILEGFKPVYDATVVEKLNQDGAISVGKANMDEFAMGGS 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSYY + W D T PGGSSGGS+AAVA L ++G+DTGGSIRQPA+F G Sbjct: 133 TETSYYSKTANAW---DQTK--VPGGSSGGSAAAVAAGLVPFALGSDTGGSIRQPAAFNG 187 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ + A SLDQ G TRTV+D+A++L IAG+D D+T VPD Sbjct: 188 IVGMKPTYGRVSRWGLFAMASSLDQVGPFTRTVKDNALVLNTIAGFDIKDSTASKREVPD 247 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L +I+G+ + +PKEY + + P + T + I+ L+ GA + E+SLPHT+Y + Sbjct: 248 FTAQLTGNIKGLKIAVPKEYFGEGIDPKVATTVKAAITQLEAMGATVDEVSLPHTKYGVA 307 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII +EASSNL RYDGVRYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS Sbjct: 308 AYYIIMSSEASSNLQRYDGVRYGYRADDVKNLEDLYVKTRSEGFGDEVKRRIMLGTFSLS 367 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A KIRTL+ DF + F DVI+ PT PT A+ LG+E ++ +M Sbjct: 368 AGAYDAFFKKAAKIRTLLIEDFNKVFAN-YDVIVGPTAPTVAYGLGEEVDDPTAM--YLA 424 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 DV TV VN+AGLP +SV A + +P+GLQ+IG+PF E+T++ G E+ F Sbjct: 425 DVLTVPVNLAGLPGLSVNAGFVD-GLPVGLQIIGKPFDEQTVYQTGYAFEQATRLFE 480 >gi|116052515|ref|YP_792828.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas aeruginosa UCBPP-PA14] gi|218893575|ref|YP_002442444.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas aeruginosa LESB58] gi|296391193|ref|ZP_06880668.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas aeruginosa PAb1] gi|313107070|ref|ZP_07793271.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa 39016] gi|122257478|sp|Q02GV8|GATA_PSEAB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226709594|sp|B7V023|GATA_PSEA8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|115587736|gb|ABJ13751.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa UCBPP-PA14] gi|218773803|emb|CAW29617.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa LESB58] gi|310879773|gb|EFQ38367.1| Glu-tRNA(Gln) amidotransferase subunit A [Pseudomonas aeruginosa 39016] Length = 484 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/476 (47%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + ++E L K SA EL + + I + Q+N++I + A A A+ +D+R Sbjct: 2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR 61 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+ L G PI KD F T+G+ T S +LD F Y++TV +KL GAV LGKLN Sbjct: 62 ANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTLGKLN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSN++S+YG V +PW S+D PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 122 MDEFAMGSSNQSSHYGAVNNPW-SLDRV----PGGSSGGSAAAVAARLLPAATGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T GIKPTYGR SR G+I++A SLDQ G + RT D A++L +AG+D D+ Sbjct: 177 IRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V PV DY AL + + G+ +G+P+EY L I + LK GA + +IS Sbjct: 237 TSVEQPVDDYLAALQKPLSGLRIGLPREYFGAGLDSRIADAVLAVVEELKTLGATVKDIS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVRYG R + LE +Y+ +R+ GFG EVK+R Sbjct: 297 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRYGYRCDAPQNLEDLYKRSRAEGFGSEVKNR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G E N Sbjct: 357 IMVGTYALSAGYYDAYYLQAQKIRRLIKNDFVSAFAE-VDVILGPTTPNPAWKIG--EKN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 414 DDPVSQYLEDIYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 468 >gi|258508014|ref|YP_003170765.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus rhamnosus GG] gi|257147941|emb|CAR86914.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus rhamnosus GG] gi|259649342|dbj|BAI41504.1| aspartyl/glutamyl-tRNA amidotransferase A subunit [Lactobacillus rhamnosus GG] Length = 484 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/480 (46%), Positives = 314/480 (65%), Gaps = 11/480 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + ++LRS +++ +LVD + I+ + ++ A++ + A A+ A D+ I D Sbjct: 8 LDQLHEQLRSGKLTSRQLVDETLAGIDKIDPEVAAFLAINADGAKKQAAVIDEAGI-ADD 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L G+PI IKD TKG+ T A S IL+ F P Y++TV QKL GA+ +GK N+DEFA Sbjct: 67 QPLSGVPIAIKDNIVTKGVVTTAASKILENFNPIYDATVMQKLAAAGAINVGKTNLDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + + W PGGSSGGS+AAVA A++G+DTGGSIRQPA Sbjct: 127 MGSSTENSAFKTTKNAWDH-----SRVPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG KPTYGR SR G+I+F+ SLDQ G +TR V+D+A +L IAG+DE D+T + Sbjct: 182 AFNGIVGFKPTYGRVSRWGLIAFSSSLDQIGTLTRGVKDAAQILNVIAGHDERDSTTADT 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPD+ + QSI+GM + +PKEY + + P + + L+ GA + E+SLPHTQ Sbjct: 242 PVPDFTAKIGQSIKGMKIALPKEYLGEGVDPEVAAKIKAAAKQLEALGATVSEVSLPHTQ 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 YA+P+YYII+ +EASSNL R+DG+RYG R + +I ++Y +RS GFG EVK RIM+GT Sbjct: 302 YAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVHNIEDVYVRSRSEGFGPEVKRRIMLGT 361 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 + LS+ YD+++ +A ++RTLI RDF FE D+I+ PTTPT AF +G++ + +M Sbjct: 362 FSLSAGFYDAYFKKAGQVRTLITRDFEAVFED-YDLIIGPTTPTVAFKIGEKVTDPVTM- 419 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 ND+ T+ VN+AGLPA SVPA + +P+GLQLIG+ F E T+F V E + Y Sbjct: 420 -YMNDILTIPVNLAGLPAASVPAGFVD-GLPVGLQLIGKHFDESTIFQVAAAFEAQNDYL 477 >gi|253581560|ref|ZP_04858785.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium varium ATCC 27725] gi|251836630|gb|EES65165.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium varium ATCC 27725] Length = 485 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 325/488 (66%), Gaps = 14/488 (2%) Query: 5 NFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 NF +S E ++++ +I + ++V + IE + + +++ + +KA A + D++ Sbjct: 3 NFYKLSAVEIKEKISKGEIKSEDVVREIFERIEKIDGNIGSFVHLRKEKALEEARKIDEK 62 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + NG+ L GIP+ IKD ++G + +CS IL+G+ Y++T +KL + A+++G Sbjct: 63 VKNGEKLGALAGIPVSIKDNMVSEGDISTSCSKILEGYTGIYDATAVKKLKEADAIIIGI 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ +TS Y +PW + + PGGSSGG++A++A S+G+DTG Sbjct: 123 TNMDEFAMGSTTKTSCYKKTKNPWDT-----ERVPGGSSGGAAASIAAQEAFISLGSDTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYGR SR G+++FA SLDQ G I + V D A+ + IAG D+ Sbjct: 178 GSIRQPASFCGVVGMKPTYGRVSRYGLMAFASSLDQIGPIAKNVADIALCMNVIAGEDDY 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT VPDY + L + I+GM +G+PKEY +D + + K + + ++ GA+I+E Sbjct: 238 DATVSKKEVPDYTKFLGKDIKGMKIGVPKEYFIDGIKEDVRKIVNEALEKFRELGAEIIE 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 ISLPHT+YA+P YY+++PAEASSNLAR+DGVRYG R + K+I ++Y N+R+ GFG EVK Sbjct: 298 ISLPHTKYAVPTYYVLAPAEASSNLARFDGVRYGYRSKDIKNIDDLYINSRTEGFGDEVK 357 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGTYVLS+ YD+++ +A+K+R LIK DF +AFE VD+I TP +P++AF L + Sbjct: 358 RRIMIGTYVLSAGFYDAYFKKAQKVRKLIKDDFDKAFEN-VDIIFTPVSPSTAFKL---D 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + D+FT++ N+AG+P IS+PA L + +P+G+QL+G+PF E L G Sbjct: 414 DVKTPIELYLEDIFTISANLAGIPGISIPAGLAD-GLPVGIQLLGKPFCEGELIQAGDAF 472 Query: 481 EKEAGYFR 488 EK G ++ Sbjct: 473 EKIRGEWK 480 >gi|121997794|ref|YP_001002581.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halorhodospira halophila SL1] gi|166217673|sp|A1WVR7|GATA_HALHL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|121589199|gb|ABM61779.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Halorhodospira halophila SL1] Length = 484 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/471 (48%), Positives = 327/471 (69%), Gaps = 10/471 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V+E L + +IS+ EL DS ++ IE + ++N+ I V A++ARAAA+ +D R+ G+A Sbjct: 6 VAEISAALHAGEISSRELTDSLLKRIEQFDPRLNSLITVTAEQARAAADAADARLRAGEA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F T G+ T S +L+ FR Y++TV ++L + GAVMLGK NMDEFA Sbjct: 66 GPLTGVPLVHKDIFCTDGVATTCGSRMLEPFRAPYDATVVRRLAEAGAVMLGKANMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNETSY+GPV +PW +D+ + SGGS+AAVA L A+ GTDTGGSIRQPA Sbjct: 126 MGSSNETSYFGPVRNPW-DLDAVPGGS----SGGSAAAVAARLAPAATGTDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + +G G+KPTYGR SR G+++FA SLDQAG RT D A+LL +AG DE D+T V+ Sbjct: 181 ALSGICGLKPTYGRVSRYGMVAFASSLDQAGPFARTAEDLALLLGGMAGLDERDSTSVDH 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY +L++SI+G+ +G+PKE+ + L + + + L+ GA++VE+ LP+ + Sbjct: 241 VVPDYSESLNRSIRGLRIGVPKEFFGEGLDADVRSRVEAALQVLEGEGAELVEVQLPNME 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ALPAYY+I+PAEASSNLAR+DGVR+G R + +D+ ++Y+ +R+ GFG EV+ RI++GT Sbjct: 301 LALPAYYVIAPAEASSNLARFDGVRFGHRCADPQDLEDLYKRSRAEGFGDEVQRRILVGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++Y +A+++R L+ DF +A +Q VDV+ PT+PT AF LG+ ++ M Sbjct: 361 YALSAGYYDAYYRKAQQVRRLVADDFRQALDQ-VDVLAGPTSPTPAFDLGERADDPVQM- 418 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D++T+ VN+AGLP +SVPA + P+GLQLIG F E L +VG Sbjct: 419 -YLSDIYTLGVNLAGLPGLSVPAGFSRGR-PVGLQLIGGYFDEARLLNVGH 467 >gi|241664945|ref|YP_002983305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia pickettii 12D] gi|240866972|gb|ACS64633.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ralstonia pickettii 12D] Length = 495 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 220/482 (45%), Positives = 308/482 (63%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K++SA EL Y+ IE + + +NA+ V A+ A A +D RI G+A L G+ Sbjct: 12 QLAAKEVSAEELARHYLSRIE-AGAHLNAFTHVDAEATLAQARAADARIAAGNAAPLTGV 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +L + +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLGNYTSPFDATVVERLGAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G V +PW + PGGSSGGS+ AVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSAFGAVKNPWNL-----EHVPGGSSGGSAVAVAADLVPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + V Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDPRDSTSLEPGRGGDV 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L Q +Q G+ +G+PKEY + L+ + T + + L+ GA +V+ Sbjct: 246 EDFGRLLGQPLQGADAARPLAGLRIGLPKEYFGEGLADDVRATVRAALGELEKLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY +R+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKSRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF Q DVI+ P PT A+ +G++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQNAFAQ-CDVIMGPVAPTVAWKIGEKS 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPVQM--YLEDIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|291563447|emb|CBL42263.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [butyrate-producing bacterium SS3/4] Length = 491 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 210/481 (43%), Positives = 308/481 (64%), Gaps = 10/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E ++++ +I++ E + + I + ++ AY+ V +K A A+E D I +G Sbjct: 6 LSATELAKKIKAGEITSEEAAKASLAQIAKEDQKIRAYLTVDEEKVLARAKEVDNGIRSG 65 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+PI +KD TK + T S IL+ F P Y++T ++ D G V+LGK NMD Sbjct: 66 KYTGPLAGVPIAVKDNICTKDMRTTCASKILENFVPFYDATAVTRITDAGMVILGKTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ ETS + +PW + + PGGSSGGS AAVA C A++G+DTGGSIR Sbjct: 126 EFAMGSTTETSAFAVTKNPWDT-----EHVPGGSSGGSCAAVAAGECFAALGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QP+S+ G GIKPTYG SR G++++A SLDQ G I + D A LL+ I +DE D+T Sbjct: 181 QPSSYCGVTGIKPTYGTVSRFGLVAYASSLDQIGPIGKNAADCAALLETITSHDEKDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + D+ A+ + I+G+ +GIPKEY D L + +Q ++LK+ GA + L Sbjct: 241 MERTDTDFTSAIGKDIRGIKIGIPKEYLSDGLDDDVRAAIEQCAAYLKECGADVEYFDLG 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +Y +PAYY+I+ AEASSNL R+DGV+YG R E + + +MY+ +RS GFG EVK RIM Sbjct: 301 LMEYTIPAYYVIAAAEASSNLERFDGVKYGYRAKEYEGLHDMYKRSRSEGFGPEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G++VLSS YD++YL+A K+R LIK+ F +AF + D+IL P PT+A +G + S Sbjct: 361 LGSFVLSSGYYDAYYLKALKVRALIKKAFDDAFAK-YDIILGPAAPTAAPKIGT--SLSD 417 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +D++TVAVN+AGLP ++VP ++ EK +P+G+QL+G FRE+TLF+ IE Sbjct: 418 PMKMYLSDIYTVAVNLAGLPGLTVPCSMNEKGLPIGVQLLGDCFREKTLFAAASAIENVR 477 Query: 485 G 485 G Sbjct: 478 G 478 >gi|288554992|ref|YP_003426927.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus pseudofirmus OF4] gi|288546152|gb|ADC50035.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus pseudofirmus OF4] Length = 485 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 217/473 (45%), Positives = 317/473 (67%), Gaps = 11/473 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE-GI 74 L +K++ ELVD + I + ++ A++ + +KAR A+E D+ + +R L G+ Sbjct: 15 LHNKEVKVSELVDESYKRIAEVDDKVGAFLALDEEKARTYAKELDEALGKETSRGLLFGM 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PIG+KD T+ + T S IL+ F P Y++TV QKL D +V +GKLNMDEFAMGSS E Sbjct: 75 PIGVKDNIVTRDLRTTCSSRILENFDPIYDATVVQKLRDAQSVTIGKLNMDEFAMGSSTE 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y +PW ++D + PGGSSGGS+AAVA ++G+DTGGSIRQPA++ G V Sbjct: 135 NSAYKETKNPW-NLD----YVPGGSSGGSAAAVAAGEVPFTLGSDTGGSIRQPAAYCGVV 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+++FA SLDQ G +TR V D+A LL+AI+G D D T + VPD+ Sbjct: 190 GLKPTYGRVSRFGLVAFASSLDQIGPVTRNVEDNAYLLQAISGVDPMDGTSAPVDVPDFL 249 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 AL ++G+ + +PKEY + + + ++ + L+ GA E+SLPH++YAL Y Sbjct: 250 SALTGDVKGLKIAVPKEYLGEGVDENVKQSVLDSLKVLEAQGATWEEVSLPHSKYALATY 309 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y++S +EAS+NL+R+DGVRYG R + D +++MY+ TR+ GFG EVK RIM+GT+ LSS Sbjct: 310 YLLSSSEASANLSRFDGVRYGYRTDNADNLIDMYKQTRAEGFGNEVKRRIMLGTFALSSG 369 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A+++RTLIK+DF + FE DVI+ PTTPT AF +G++ ++ +M ND+ Sbjct: 370 YYDAYYKKAQQVRTLIKQDFDKIFEN-YDVIIGPTTPTPAFKIGEKTDDPLTM--YANDI 426 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 T+ VN+AG+P ISVP + +PLGLQ+IG+ F E T++ V + E+ Y Sbjct: 427 LTIPVNLAGVPGISVPCGF-QDGLPLGLQIIGKHFDESTIYRVAHVFEQATDY 478 >gi|94987327|ref|YP_595260.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Lawsonia intracellularis PHE/MN1-00] gi|166217677|sp|Q1MPY8|GATA_LAWIP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|94731576|emb|CAJ54939.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Lawsonia intracellularis PHE/MN1-00] Length = 485 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 326/482 (67%), Gaps = 13/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++++ + L S++ S E+ + + I + +NA+I + A++A + A++ D+ + Sbjct: 7 LSLAQIHNLLISREKSVEEVTQACLDRIIATEPTINAFITICAEEALSEAKKLDQSTPD- 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIPI +KD TK I T A S +L F P Y++ + Q+L + GA+++GK N+DE Sbjct: 66 PKKPLWGIPIAVKDNILTKNIPTTAASCMLKHFIPQYDAFIIQQLKNAGAIIIGKTNLDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETS++GP +PW + K PGGSSGGS+A+VA F C ++IGTDTGGSIRQ Sbjct: 126 FAMGSSTETSFFGPTYNPWNT-----KCVPGGSSGGSAASVAAFQCFSAIGTDTGGSIRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G +G+KPTYGR SR GII++A SLDQAG ITRTV D+AI+L +A +D D T Sbjct: 181 PAALCGCIGLKPTYGRVSRYGIIAYASSLDQAGPITRTVEDAAIMLSVLAKHDPQDTTSS 240 Query: 247 NLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +Y L Q + G+T+GIPKE+ +++ P I +QQ I K+ GAK +++SLP Sbjct: 241 FKATDNYYINLKKQDLTGITIGIPKEFISEHIDPPILDIYQQAIEQAKELGAKTIDLSLP 300 Query: 306 H-TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 H T +A+ YYII+ AEASSNLAR+DGVRYG R + L E+Y N+R+ GFG+EVK RI Sbjct: 301 HATDHAIATYYIIATAEASSNLARFDGVRYGYRAKNSHTLEELYINSRTKGFGEEVKRRI 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GT+VLS+ Y+++Y +A ++R LI +DF F++ D++LTP +P +A+ +G Sbjct: 361 LLGTHVLSTDYYENYYHKAAQVRYLILQDFLSVFKK-CDILLTPVSPITAWEIGSTIKKP 419 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ H D+FTV++N+AGLP +S+PA L K +P+G+QLIGQ F E TL S+G I+ K Sbjct: 420 ITIYH--KDIFTVSLNLAGLPGLSIPAGLV-KGLPVGIQLIGQAFDESTLLSIGNILHKY 476 Query: 484 AG 485 G Sbjct: 477 LG 478 >gi|254796639|ref|YP_003081475.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neorickettsia risticii str. Illinois] gi|254589876|gb|ACT69238.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neorickettsia risticii str. Illinois] Length = 471 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/471 (48%), Positives = 302/471 (64%), Gaps = 12/471 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L ++IS++ELV++++ I N NA I V ++AR A+ +D+R+ G + + L GI Sbjct: 5 LVRREISSLELVEAHLLQIRERNPHTNALILVTEEEARQRAKLADERLKRGKSINTLTGI 64 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P IKD + TKG+ T A S L F P YESTVT KL D GAVMLGK NMDEFAMGSSN Sbjct: 65 PCVIKDMYCTKGVRTTAASRALRNFVPTYESTVTSKLIDAGAVMLGKANMDEFAMGSSNT 124 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +SY+GPV +P D PGGSSGGS+AAVA + S+G+DTGGS+RQPASF G V Sbjct: 125 SSYFGPVKNPLNGKKGVD-LVPGGSSGGSAAAVADYYSPFSLGSDTGGSVRQPASFCGLV 183 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PTYGRCSR G+I A SLDQAGI +R V D+A + + I+GYD D+TC L Y Sbjct: 184 GLRPTYGRCSRWGMIPLANSLDQAGIFSRNVEDNAAVFEVISGYDRKDSTCAKLEPFKYN 243 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + D I+ + VGIPKE ++ LS I K W+ L+ GA+I+++SLP +Y+L Y Sbjct: 244 KNPD--IRHIRVGIPKECKVSGLSSHIVKLWESTADILRQLGAEIIDVSLPCVEYSLMVY 301 Query: 315 YIISPAEASSNLARYDGVRYG--LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YII AEASS LARYDG+RY + I E+YE RS+ FG+EVK R+ +GT+VLSS Sbjct: 302 YIICSAEASSQLARYDGIRYSPDPSISASTISELYEKYRSVSFGREVKRRLFMGTHVLSS 361 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-GKEENNSGSMGHIYN 431 Y +Y A++++ I +++ FE+ VDVIL PT P AFP+ GK E + N Sbjct: 362 SGYSDYYAAAKELQEEIVSEYSAVFEK-VDVILNPTAPNDAFPIDGKLE----PLEMYMN 416 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+FTV ++A LP IS+P L E MPLG+ L F EE L +V ++ Sbjct: 417 DIFTVPTSVAKLPCISIPVGLSEDDMPLGMHLTANYFAEELLLNVALALQN 467 >gi|147678857|ref|YP_001213072.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pelotomaculum thermopropionicum SI] gi|146274954|dbj|BAF60703.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Pelotomaculum thermopropionicum SI] Length = 533 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/488 (46%), Positives = 310/488 (63%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E + L K+ISA EL + IE ++ A+I + A A D + Sbjct: 50 QLFQLTAHELHELLIKKEISAEELNKAVFDRIEAVEGKIGAFITRTKEHALERARAVDGQ 109 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I NG L GIP+ +KD T GI T A S +L GF P Y +TV +KL GAV++GK Sbjct: 110 IRNGGKISPLSGIPVAVKDNICTCGIPTTAGSRMLSGFVPPYSATVVKKLDAAGAVLVGK 169 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW T++ PGGSSGGS+AAVA ++G+DTG Sbjct: 170 TNMDEFAMGSSTENSAFFITRNPW----DTER-VPGGSSGGSAAAVAAGEAVLALGSDTG 224 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYG SR G+I+FA SLDQ G + R V D A++L AI G+D Sbjct: 225 GSIRQPASFCGVVGMKPTYGAVSRFGLIAFASSLDQIGPLARDVTDCALMLNAICGHDPM 284 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T PDY L ++G+ +G+P+EY + + P + + ++ + + GA + Sbjct: 285 DSTSARFDAPDYTAFLVNDVRGLKIGVPEEYMAEGIEPGVRQAVEEAMKLFESLGALVEY 344 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +LPHT+YALP YY+I+PAEASSNLARYDGVRYG R E +D+++M+ TRS GFG EVK Sbjct: 345 TTLPHTEYALPTYYLIAPAEASSNLARYDGVRYGRRAAEAEDVIDMFMKTRSQGFGSEVK 404 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++YL+A K+RTLIK DF AFE+ D++L+P +PT+AF +G++ Sbjct: 405 RRIMLGTYALSAGYYDAYYLKALKVRTLIKEDFDRAFEK-YDLLLSPVSPTTAFRIGEKT 463 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M +D+ T++VN+AG+P ISVP MP+GLQL+G+PF E L Sbjct: 464 GDPIQM--YLSDICTISVNLAGIPGISVPCGF-SGGMPVGLQLMGRPFDEGLLLRAAYTF 520 Query: 481 EKEAGYFR 488 E+ GY R Sbjct: 521 EQNTGYHR 528 >gi|99034243|ref|ZP_01314306.1| hypothetical protein Wendoof_01000896 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 385 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 207/382 (54%), Positives = 277/382 (72%), Gaps = 4/382 (1%) Query: 104 ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS 163 ESTV+ L +GA MLGKLNMDEFAMGS+N SY+GPV + W +K PGGSSGGS Sbjct: 1 ESTVSDLLLKSGAAMLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGS 60 Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 +A+VAGFLCA ++G+DTGGS+RQPA++ G VGIKPTYGRCSR G+I+FA SLDQAG+ITR Sbjct: 61 AASVAGFLCAGALGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITR 120 Query: 224 TVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK 283 +V DSA++L+AI GYD D+ PVP + ++ ++G +GIPKEYR+D +S I Sbjct: 121 SVSDSALMLEAICGYDTKDSISSEKPVPKFSSFINGDVKGKRIGIPKEYRMDGISEEIVH 180 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 W++ S+LK+ GA++V+++LPHT+YA+P YY+I AE SSNLARYDGVRYG RV+ + Sbjct: 181 NWEKVASYLKENGAEVVDVTLPHTKYAIPVYYLICSAETSSNLARYDGVRYGFRVDADTL 240 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 EMY TR+ GFG+EVK RI+IG Y LSS Y+ +Y +A+ IR LI+ DF +AFE+ +D Sbjct: 241 EEMYSLTRAEGFGKEVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEK-IDY 299 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 IL P+ PT AF L ++ + + NDVFTV ++AGLPAISVP L + +PL LQ+ Sbjct: 300 ILVPSAPTEAFGLNEKPD---PLIMCINDVFTVPASLAGLPAISVPVGLSNEGLPLALQV 356 Query: 464 IGQPFREETLFSVGQIIEKEAG 485 IG + E + +V +IE+ G Sbjct: 357 IGNYYDEAGILNVASVIEQNCG 378 >gi|325693544|gb|EGD35463.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK150] Length = 488 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 214/486 (44%), Positives = 307/486 (63%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F EET++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|300172819|ref|YP_003771984.1| aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A [Leuconostoc gasicomitatum LMG 18811] gi|299887197|emb|CBL91165.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leuconostoc gasicomitatum LMG 18811] Length = 488 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/481 (46%), Positives = 315/481 (65%), Gaps = 14/481 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++L + DIS V+L + ++ IE ++S++ A+I + +A A++ D + + + L Sbjct: 14 HEKLVNNDISTVDLTQATLENIEKTDSELQAFIRTNSDEALLQAKKIDAQ--HDFSNILS 71 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ KD AT GI T SHIL+GF+P Y++TV KL GA+ +GK NMDEFAMG S Sbjct: 72 GLPLAFKDNLATNGIETTGASHILEGFKPVYDATVVSKLSTVGAISVGKTNMDEFAMGGS 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSYY + W D T PGGSSGGS++AVAG ++G+DTGGSIRQPA+F G Sbjct: 132 TETSYYKKTTNAW---DHTK--VPGGSSGGSASAVAGGQIPFALGSDTGGSIRQPAAFNG 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ + A SLDQ G TRTV+D+A++L IAG+DE D+T VPD Sbjct: 187 IVGLKPTYGRVSRWGLFAMASSLDQIGPFTRTVKDNALVLNTIAGFDEKDSTSSKRDVPD 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L ++G+ + +PKEY + + P + T + I+ L+ GA + E+SLPHT+Y + Sbjct: 247 FTSKLTGDVKGLKIAVPKEYFGEGIDPKVATTVKAAIAQLEAMGATVDEVSLPHTKYGVA 306 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII +EASSNL RYDGVRYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS Sbjct: 307 AYYIIMSSEASSNLQRYDGVRYGFRADDVKNLEDLYIKTRSEGFGDEVKRRIMLGTFSLS 366 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A KIRTL+ DF + F DVI+ PT PT A+ LG+E ++ +M Sbjct: 367 AGAYDAFFKKAAKIRTLLIEDFNKVFAD-YDVIVGPTAPTVAYGLGEEIDDPTAM--YLA 423 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF--RP 489 DV T+ VN+AGLP +SV A + +P+GLQ+IG+PF E T++ G E+ + F RP Sbjct: 424 DVLTIPVNLAGLPGLSVNAGFVD-GLPVGLQIIGKPFDEATVYQTGYAFEQASRLFEQRP 482 Query: 490 H 490 + Sbjct: 483 N 483 >gi|125974051|ref|YP_001037961.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Clostridium thermocellum ATCC 27405] gi|125714276|gb|ABN52768.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Clostridium thermocellum ATCC 27405] Length = 486 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 17/482 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE RL+S++ISAVEL +YI AIE N +NAY+ + A AAE++D+R+ G A Sbjct: 5 ISELAKRLQSREISAVELTKAYIGAIEKLNPTINAYVHLTFDTAMKAAEKADQRLKEGGA 64 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD T G+ T CS IL GF+P+Y++TV +KL +GAV+LGK NMDEFA Sbjct: 65 PLLCGIPMALKDNICTDGLSTTCCSKILKGFKPYYDATVWEKLKAHGAVLLGKTNMDEFA 124 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS++ETS YG ++P + + GGSSGGS+AAV L S+G+DTGGSIRQPA Sbjct: 125 MGSTSETSCYGAPLNPRNT-----NYVTGGSSGGSAAAVCANLAVYSLGSDTGGSIRQPA 179 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYG SR G+I++ SLDQ G +T +V+D+AI+ AI G D D T V+ Sbjct: 180 SFCGVVGLKPTYGAVSRYGLIAYGSSLDQIGPMTNSVKDAAIVFDAIKGGDRRDQTSVDY 239 Query: 249 PVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY LD+ ++GM +G+ +E+ D ++P I ++ I + GA I I L Sbjct: 240 ---DYGSSLAECLDRDVKGMRIGVAEEF-FDGINPEIKSKIEEAIKLFERNGAVIENIRL 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 P + ALP YYII+ AEASSNL RYDG+RYG R I +M TRS GFG EVK RI Sbjct: 296 PALKLALPVYYIIACAEASSNLGRYDGIRYGYRTSSYTSIEDMIVKTRSEGFGDEVKRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTYVLSS YD++Y +A IR I R+F FE+ DV++ PT P +AFPL + + Sbjct: 356 MLGTYVLSSGYYDAYYKKACLIREEINREFDAVFEK-CDVLVAPTAPNTAFPLNYK--GA 412 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 G + +D+ TV VN+AG+PAISVP +P+G+Q+IG+ F E T+ E+ Sbjct: 413 GPVEMYLSDICTVPVNIAGVPAISVPCGEDSNGLPVGMQIIGKKFDEATVLQAAHFYEQS 472 Query: 484 AG 485 AG Sbjct: 473 AG 474 >gi|332977670|gb|EGK14438.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Psychrobacter sp. 1501(2011)] Length = 499 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 220/496 (44%), Positives = 319/496 (64%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+ ++V++ D L+S+ S+VEL D +++ I + ++N++I V + AR AA+ +D Sbjct: 1 MSDLHHLSVAQLADGLKSQQFSSVELTDHFLKRINKLDEKINSFITVDEEGARQAAKAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ +GD L G+P+ KD F TKG+ T + S +L F Y++T+ + + GAV LG Sbjct: 61 EKRSSGDTSALLGLPMAHKDLFCTKGLLTTSGSKMLHNFVSPYDATIVTNIRNAGAVCLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SYYG V +PW + PGGSSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYYGAVHNPWDT-----SRVPGGSSGGSAAAVAAGFVPFATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQAG R+ D A LL+ +AG+D Sbjct: 176 GGSIRQPASFCGLTGMKPTYGRVSRFGMIAYASSLDQAGTFGRSSEDCAYLLQPMAGHDP 235 Query: 241 CDATCVNLPVPDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 DAT + VPDY + + Q G+ +G+ KEY + L +D + + Sbjct: 236 RDATSIKRDVPDYVAEMHDAAQKADANKPFTGLRIGVAKEYFGEGLDSEVDSKVRAALKQ 295 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENT 350 +D GA IVE+++ L YY+++PAEASSNL+R+DGVR+G R E KD+ ++Y + Sbjct: 296 YEDLGATIVEVNITDPAITLATYYMLAPAEASSNLSRFDGVRFGYRCEDPKDLADLYTRS 355 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 RS GFG EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ DVI +PT P Sbjct: 356 RSEGFGDEVQRRILMGTYALSAGYFDAYYTKAQKVRRLILEDFIKAFEK-CDVIASPTAP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+A+ LG + + + DV+T+ VN+AGLPAIS+PA E +P+GLQLIG + + Sbjct: 415 TAAYKLGADLD---PVTMYLGDVYTIGVNLAGLPAISMPAGFTESGLPVGLQLIGNHWDD 471 Query: 471 ETLFSVGQIIEKEAGY 486 L S I ++ Y Sbjct: 472 SKLLSTAHIFQQHTDY 487 >gi|307289582|ref|ZP_07569526.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0109] gi|312900321|ref|ZP_07759632.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0470] gi|306499396|gb|EFM68769.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0109] gi|311292509|gb|EFQ71065.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX0470] gi|315164581|gb|EFU08598.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecalis TX1302] Length = 489 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/487 (45%), Positives = 315/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L +++E D L SK+I+AV+L + + I+++ Q+ ++I V +KA A A+ D Sbjct: 1 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I ++ L GIPIGIKD TK I T A S +L F P Y++TV K++ + +G Sbjct: 61 LKGIT-ESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS++AVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSASAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + + + + + K GA + Sbjct: 235 KDGTSAGVSVPDFTADLTGDIKGMKIALPKEYLGEGVQSDVREAVLKAAETFKSLGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R + LE +Y N+RS GFG EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSDNVQNLEDVYVNSRSEGFGTEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+H+ +A ++RTLIK+DF F D+I+ P+TPT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFAD-YDLIIGPSTPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEHTMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|199597356|ref|ZP_03210787.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit [Lactobacillus rhamnosus HN001] gi|199591872|gb|EDY99947.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit [Lactobacillus rhamnosus HN001] Length = 484 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/480 (46%), Positives = 315/480 (65%), Gaps = 11/480 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + ++LRS +++ +LVD + I+ + ++ A++ + A A+ A D+ I D Sbjct: 8 LDQLHEQLRSGKLTSRQLVDETLAGIDKIDPEVAAFLAINADGAKKQAAAIDEAGI-ADD 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L G+PI IKD TKG+ T A S IL+ F P Y++TV QKL GA+ +GK N+DEFA Sbjct: 67 QPLSGVPIAIKDNIVTKGVVTTAASKILENFNPIYDATVMQKLAAAGAINVGKTNLDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + + W PGGSSGGS+AAVA A++G+DTGGSIRQPA Sbjct: 127 MGSSTENSAFKTTKNAWDH-----SRVPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG KPTYGR SR G+I+F+ SLDQ G +TR V+D+A +L IAG+DE D+T + Sbjct: 182 AFNGIVGFKPTYGRVSRWGLIAFSSSLDQIGTLTRGVKDAAQILNVIAGHDERDSTTADT 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPD+ + QSI+GM + +PKEY + + P + + L+ GA + E+SLPHTQ Sbjct: 242 PVPDFAAKIGQSIKGMKIALPKEYLGEGVDPEVAAKIKAAAKQLEALGATVSEVSLPHTQ 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 YA+P+YYII+ +EASSNL R+DG+RYG R + +I ++Y +RS GFG EVK RIM+GT Sbjct: 302 YAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVHNIEDVYVRSRSEGFGPEVKRRIMLGT 361 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 + LS+ YD+++ +A ++RTLI RDF EA + D+I+ PTTPT AF +G++ + +M Sbjct: 362 FSLSAGFYDAYFKKAGQVRTLITRDF-EAVFKDYDLIIGPTTPTVAFKIGEKVTDPVTM- 419 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 ND+ T+ VN+AGLPA SVPA + +P+GLQLIG+ F E T+F V E + Y Sbjct: 420 -YMNDILTIPVNLAGLPAASVPAGFVD-GLPVGLQLIGKHFDESTIFQVAAAFEAQNDYL 477 >gi|325696982|gb|EGD38869.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK160] Length = 488 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 214/486 (44%), Positives = 307/486 (63%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEEVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ V E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFNEATIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|300813138|ref|ZP_07093515.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300495892|gb|EFK31037.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 480 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/477 (47%), Positives = 306/477 (64%), Gaps = 17/477 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D+L+S +SA +L I I+ ++ ++NA+I V + AE+ D L Sbjct: 12 NDKLKSGAVSADQLAKDTIANIKKTDEKINAFITV--DEDAKPAEDLDFN------NKLA 63 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD T G+ T A SHIL F P YESTV KL A ++GK NMDEFAMGSS Sbjct: 64 GVPIAIKDNIITNGLKTTAASHILYNFEPVYESTVVAKLKAAQATIIGKTNMDEFAMGSS 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSY+G +PW + +K PGGSSGGS+AAVA A++G+DTGGSIRQPASF G Sbjct: 124 TETSYFGDTKNPW----NLNK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNG 178 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 GIKPTYGR SR G+I+FA SLDQ G++++ V+DSA +L IAG D+ DAT VPD Sbjct: 179 IFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAGADDRDATVSEKEVPD 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y L + ++G+ V +PKEY D + + K + I L+ GA I E+SLPHT+Y +P Sbjct: 239 YTSFLGKDVKGLRVAVPKEYMSDAVEEGVRKAVEAQIELLRANGAIINEVSLPHTKYVVP 298 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ +EAS+NL RYDG+RYG R E K++ E++ +RS GFG EVK RIM+G++ LS+ Sbjct: 299 TYYIIASSEASANLERYDGIRYGYRAEAKNLDEVFLKSRSEGFGDEVKRRIMLGSFALSA 358 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD +L+A K+RTLI +DF + FE DVI+ P + +AF L E ++ M + ND Sbjct: 359 GAYDKFFLQAAKVRTLICQDFDKIFEDN-DVIVGPVSTETAFDLNSEISDPVKMYN--ND 415 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + T++ NMAG+PA SVPA L E MP+G Q++ + F E +F V IE+ ++ Sbjct: 416 ILTISANMAGIPAASVPAGLSETTGMPVGFQIMAKRFDEGHVFQVADFIERSNKFYE 472 >gi|297539764|ref|YP_003675533.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylotenera sp. 301] gi|297259111|gb|ADI30956.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylotenera sp. 301] Length = 499 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/475 (48%), Positives = 318/475 (66%), Gaps = 18/475 (3%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + L++K IS+VEL +++ I+ N +NAYI + K A A+ +D RI +G+ L G Sbjct: 11 EMLQAKKISSVELTQTFLDRIQQYNPSINAYIALDEAKTLAQAKAADARIADGNVAPLTG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPI KD F KG T S +L F Y++ + + GAV LGK NMDEFAMGSSN Sbjct: 71 IPIAQKDIFCAKGWQTTCGSKMLANFIAPYDAHIITQFDAAGAVNLGKTNMDEFAMGSSN 130 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+G V +PW S D+ PGGSSGGS+AAVA LCAA+ GTDTGGSIRQPAS G Sbjct: 131 ETSYFGGVKNPW----SFDR-VPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGF 185 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPTYG SR G+I+FA SLDQAG + ++ D A+++ +AG+DE D+T +N DY Sbjct: 186 TGLKPTYGAVSRYGMIAFASSLDQAGPMAKSAEDCALMMNVMAGFDERDSTSLNREKEDY 245 Query: 254 ERALDQS-----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 RAL S +QG+ VG+PKEY + L ++ K + I+ K GA+IV+ISLP+T Sbjct: 246 TRALYNSNPTKPLQGLKVGLPKEYFSEGLDASVGKVIEAAIAEYKKLGAEIVDISLPNTG 305 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++P YY+++PAEASSNL+RYDGVRYG R E D+++MY +R+ GFG EVK RI+IGT Sbjct: 306 LSIPVYYVLAPAEASSNLSRYDGVRYGHRAAEYTDLMDMYNKSRAEGFGAEVKRRILIGT 365 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A++IR LI +DF EAF++ DVI+ P P++AF G++ ++ +M Sbjct: 366 YVLSAGYYDAYYLKAQQIRRLIAQDFVEAFKK-CDVIMGPAAPSTAFKAGEKVDDPVAM- 423 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEK----KMPLGLQLIGQPFREETLFSVGQ 478 D++T++ N+AGLP +S+PA + +P+GLQ+IG F E + +V Sbjct: 424 -YLQDIYTISTNLAGLPGMSIPAGFAQSDDGVSLPVGLQIIGNYFDEARMLNVAH 477 >gi|332363360|gb|EGJ41145.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK49] Length = 488 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 214/486 (44%), Positives = 307/486 (63%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N V E D L K+ISAVEL + + I+ + ++++I V ++A A AE D + Sbjct: 3 FNHKTVEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAEALDVKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKG+ T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGMLTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGNHFDEATIYQTAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|238021993|ref|ZP_04602419.1| hypothetical protein GCWU000324_01898 [Kingella oralis ATCC 51147] gi|237866607|gb|EEP67649.1| hypothetical protein GCWU000324_01898 [Kingella oralis ATCC 51147] Length = 482 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/474 (46%), Positives = 306/474 (64%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ + L+SK ISAVEL Y+ AI N +N YI + A A +D RI G+A Sbjct: 6 LTQASNLLQSKKISAVELATEYLNAINARNPSINGYITLNPDATLAEARAADARIAQGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F G T S +LD F Y +TV Q L D G + LG+ NMDEFA Sbjct: 66 HALTGVPIAYKDIFCQTGWRTACASKMLDNFVAPYTATVVQNLLDAGMITLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNETS+YG V +P+ + + GGSSGGS+A VA L A++G+DTGGSIRQPA Sbjct: 126 MGSSNETSFYGAVHNPFNT-----QHVAGGSSGGSAAVVAARLAPAALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G G+KPTYG SR G+I++A S DQAG + +T D A+LL +A +DE D+T ++ Sbjct: 181 SHCGITGLKPTYGIVSRFGMIAYASSFDQAGPMAQTAEDCALLLNQMASFDERDSTSLDR 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY L+Q ++GM +G+PKEY S + + + L+ GA+++E+SLP T+ Sbjct: 241 AREDYTSQLNQPLKGMKIGLPKEYFTQNNSADVQAALENAKALLQAQGAELIEVSLPQTE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R E ++ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLASAEASTNLSRYDGVRYGHRAKEFANLDEMYSNTRAEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF Q D+IL P PT+A LG E N + Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQAAFAQ-CDLILAPAAPTAAPKLG--ELNQDPVQ 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+S+PA L + +P+G+QLIG F E + ++ Sbjct: 418 AYLSDIYTIAVNLAGLPALSLPAGLSAEGLPIGVQLIGNYFAEAKILGAAHQMQ 471 >gi|254432159|ref|ZP_05045862.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cyanobium sp. PCC 7001] gi|197626612|gb|EDY39171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cyanobium sp. PCC 7001] Length = 490 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/482 (47%), Positives = 316/482 (65%), Gaps = 11/482 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 +M ++E R++L ++SA EL D ++ I+ + + A++ V A++ARA A+ D Sbjct: 4 WMGIAEWREQLERGEVSARELTDHHLARIDAVDGSVKAFLTVTAERARADADRIDAARAA 63 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L GIP+ IKD T GI T S +L+ F P YESTVT++LW GAV+LGK N+ Sbjct: 64 GEPLSPLAGIPLAIKDNLCTAGIATTCSSRMLESFVPPYESTVTERLWQAGAVLLGKTNL 123 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS ETS +GP +PW + PGGSSGGS+AAVA C A++G+DTGGSI Sbjct: 124 DEFAMGSSTETSAFGPSHNPW-----DPERVPGGSSGGSAAAVAAGECVAALGSDTGGSI 178 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYGR SR G+++FA SLDQ G TR+V D+A LL+ IAG D D+T Sbjct: 179 RQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFTRSVADAAELLQVIAGPDPRDST 238 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 C+ LPVPDY AL Q + G+ VG+ +E + L + + S L+ G ++V++S Sbjct: 239 CLRLPVPDYRTALRQPVAGLRVGVVRECLEAEGLQAEVKASVLAAASQLEALGCELVDVS 298 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 P + YY+I+P+EAS+NLARYDGV+YG R EG +++ EM +R+ GFG EV+ R Sbjct: 299 CPRFNDGIATYYVIAPSEASANLARYDGVKYGHRAEGVENLAEMTARSRAEGFGDEVQRR 358 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTY LS+ D++Y +A+++RTLI+RDF AFEQ VDV+LTPT+PT+AF G ++ Sbjct: 359 ILIGTYALSAGYVDAYYKKAQQVRTLIRRDFDRAFEQ-VDVLLTPTSPTTAFAFGAHTDD 417 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ NMAG+PAISVP ++ +P+G+Q I E L V E Sbjct: 418 PLAM--YLADLLTIPANMAGVPAISVPCGFDQRGLPIGVQFITNVLEEGRLLQVAHHYEL 475 Query: 483 EA 484 A Sbjct: 476 AA 477 >gi|323141455|ref|ZP_08076344.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phascolarctobacterium sp. YIT 12067] gi|322414035|gb|EFY04865.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phascolarctobacterium sp. YIT 12067] Length = 489 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/488 (45%), Positives = 319/488 (65%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E ++L +K++S+VEL ++ I ++ Q+N+Y+ + + A A A + D + Sbjct: 2 DLYKLTAHELHEKLVNKEVSSVELTNAVIARVDAVEDQVNSYVTLDKENALAQAAKVDAK 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ L GIP IKD +TKG+ T S +L+ F P Y++ V + L + + LGK Sbjct: 62 IAAGEKIAPLAGIPGAIKDNISTKGLRTTCSSKMLENFIPVYDAHVIKNLRADETIFLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGS+ +TS++G +PW ++D PGGSSGGS+AA+A ++G+DTG Sbjct: 122 TNLDEFAMGSTTKTSHFGVTHNPW-NLDRV----PGGSSGGSAAAIAAGEAIWTLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VGIKPTYGR SR G ++FA SLDQ G IT+ V D+A++L I G DE Sbjct: 177 GSIRQPASFNGCVGIKPTYGRVSRYGCVAFASSLDQIGPITKDVTDAALVLNTICGKDEM 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T +++ VPD+ +AL ++G+ +G+PKEY + + + + + K+ GA+IVE Sbjct: 237 DSTSLDVEVPDFTKALVNDVKGLRIGLPKEYFGEGVDAKVKAEIMKAVEKYKELGAEIVE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +SLPHT+YA+ YYII+PAEAS+NLAR+DGVRYG R V+ EM +R+ GFGQEV+ Sbjct: 297 VSLPHTEYAVITYYIIAPAEASANLARFDGVRYGYRNVDATSAPEMTTMSRTEGFGQEVR 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLSS YD++Y +A ++RTLI+RDF AFE+ DV+LTPT+P A+ + E Sbjct: 357 RRIMLGTYVLSSGYYDAYYNKAMQVRTLIRRDFEAAFEK-CDVLLTPTSPVPAYGINDEM 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + DV T+ VNMAGLP IS+P + MP+G+QLIG+ E T+ Sbjct: 416 D---PLTMYMLDVTTIPVNMAGLPGISIPCGFADDGMPIGMQLIGKVLDEATILRAAYTF 472 Query: 481 EKEAGYFR 488 E+ Y + Sbjct: 473 EQATEYHK 480 >gi|284052668|ref|ZP_06382878.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arthrospira platensis str. Paraca] gi|291568099|dbj|BAI90371.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthrospira platensis NIES-39] Length = 487 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 231/480 (48%), Positives = 314/480 (65%), Gaps = 13/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +K+ SAVE+ + I + +++ + A +A A + D +I GD Sbjct: 3 SICELHQQLVNKERSAVEITTEALDRINKLEPTLKSFLCITADRALQQARQVDAKIAAGD 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPI +KD T+GI T S IL F P YESTVT KL + GAV+LGK N+DE Sbjct: 63 EIGLLAGIPIAVKDNMCTEGITTTCGSKILANFVPPYESTVTTKLIEAGAVILGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAFQITANPW---DITR--VPGGSSGGSAAAVAANEAVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G RTV+D+AILL AIAGYD D+T + Sbjct: 178 PASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFGRTVKDAAILLNAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N+ +PDY L S++ + +G+ KE + L P +++ + I L+ GA+I IS Sbjct: 238 NVDIPDYTDFLKPSLKPRSKIKIGVIKETFGEGLDPVVEQAVTKAIEVLQSLGAEIQVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P +Y LP YYII+P+EAS+NLARYDGV+YG R D ++EMY TR+ GFG EVK R Sbjct: 298 CPRFRYGLPTYYIIAPSEASANLARYDGVKYGFRTPDADNLIEMYAKTRAEGFGAEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK+DF AF Q V+V++ PT+PT+AF G++ ++ Sbjct: 358 IMIGTYTLSAGYYDAYYLKAQKVRTLIKQDFDRAFTQ-VEVLVCPTSPTTAFQAGEKTSD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ T+ VN+AGLPAISVP + +P+G+QLIG+ E LF V E+ Sbjct: 417 PLSM--YLSDLMTIPVNLAGLPAISVPCGFDSQGLPIGMQLIGKVLGESRLFEVAHAYEQ 474 >gi|300766629|ref|ZP_07076546.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495729|gb|EFK30880.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 487 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/475 (44%), Positives = 299/475 (62%), Gaps = 13/475 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 L +K ISA EL + + + ++ A++ + ++A A D+ I DA + GI Sbjct: 15 LVAKKISATELAKATFANMNQVDPKLGAFLNLNEEQALQQAAALDQNGI--DANNFFAGI 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKG+ T A S +L+ F P Y +TV KL + A+++GK NMDEFAMG S E Sbjct: 73 PMAVKDNIVTKGLTTTAASKMLENFVPVYNATVVDKLLASNALIVGKTNMDEFAMGGSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS + +PW PGGSSGGS+ AVA + G+DTGGSIRQP+SF G V Sbjct: 133 TSAFHVTRNPWDI-----SRVPGGSSGGSAVAVASGQVPVAFGSDTGGSIRQPSSFNGIV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV+D+A L IAG D D T VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPMTRTVKDNAAALNMIAGNDVHDTTSSKQTVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L I+GM +G+PKEY D + P + + QQ + +D GA + E+SLP+++Y + AY Sbjct: 248 AGLTGDIKGMKIGLPKEYMGDGIDPKVREVIQQAVKQFEDLGATVEEVSLPNSRYGVAAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 308 YIIASSEASSNLQRFDGIRYGFRADDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLSAG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A ++RT+I DF + FE D+I+ P PT AF LG E ++ +M NDV Sbjct: 368 YYDAYFHKAGQVRTMIINDFNKVFED-YDLIMGPVAPTPAFKLGDELSDPITM--YMNDV 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +SVPA + +P+GLQLIG+ F E T++ G E+ ++ Sbjct: 425 LTIPVNLAGLPGMSVPAGFAD-GLPVGLQLIGKAFDESTMYRAGYAFEQATQVYK 478 >gi|237748827|ref|ZP_04579307.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oxalobacter formigenes OXCC13] gi|229380189|gb|EEO30280.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oxalobacter formigenes OXCC13] Length = 483 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 221/478 (46%), Positives = 311/478 (65%), Gaps = 14/478 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE L++K ISA EL +++ I +SQ+NA++ V AE +D+R+ +A Sbjct: 6 LSELSALLQAKQISATELAKLFLKRI--GDSQLNAFLHVDESLTLKQAELADERLARNEA 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F TK + A S IL + + +TV QK D G VMLGKLN DEFA Sbjct: 64 TPLTGVPIAHKDIFVTKDWRSTAGSKILANYTSPFNATVVQKFQDAGMVMLGKLNCDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE SY+GPV++PW + K PGGSSGGS+AAVA L A+ TDTGGSIRQP+ Sbjct: 124 MGSSNENSYFGPVMNPWDT-----KAIPGGSSGGSAAAVAARLTPAATATDTGGSIRQPS 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G GIKPTYGR SR G+I++A SLDQ G I +T D A+LL + G+D D+T V Sbjct: 179 AFCGVSGIKPTYGRVSRFGMIAYASSLDQGGPIAKTAEDCALLLNEMTGFDPRDSTSVER 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R L++ + G+ +G+P+EY + LS +++ + +S + GAK+V+ISL +T Sbjct: 239 KNEDYTRDLNKPLDGLRIGVPREYFSEGLSSEVEQAVRNALSEYEKLGAKLVDISLKNTA 298 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 +P YY+I+PAEASSNL+R+DGVRYG R E D+ +MY TRS GFG+EV+ RI++GT Sbjct: 299 LCIPVYYVIAPAEASSNLSRFDGVRYGFRAENYTDLQDMYRKTRSEGFGEEVQRRILVGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++Y++A++IR LI D+ AF++ DVI+ P +PT A+ LG + +N + Sbjct: 359 YVLSHGYYDAYYIQAQRIRRLIAEDYKNAFKE-CDVIMGPVSPTVAWNLGDKADN--PVA 415 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+FT++ N+AGLP +S+P + K P+GLQL G F E L ++ +K Sbjct: 416 NYLGDIFTLSTNLAGLPGMSIPCGFGQGEHAKRPVGLQLTGNYFDEARLLNIAHQYQK 473 >gi|153856066|ref|ZP_01996957.1| hypothetical protein DORLON_02985 [Dorea longicatena DSM 13814] gi|149751728|gb|EDM61659.1| hypothetical protein DORLON_02985 [Dorea longicatena DSM 13814] Length = 521 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 214/490 (43%), Positives = 301/490 (61%), Gaps = 10/490 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + E ++++K+IS VE V + I IE +N+++ + + A AEE Sbjct: 34 DITSLTAVELGKKIKAKEISVVEAVKASIAQIEKVEKDVNSFVTLDKEGALKRAEEVQTL 93 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G L G+P+ IKD TKG+ T S IL F+P + + + L GAV+LGK Sbjct: 94 IDDGTLTGPLAGVPVAIKDNMCTKGMLTTCSSKILGNFQPMFTAEAVKNLEAAGAVILGK 153 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ ETSY+GP +PW + PGGSSGGS AAVA ++G+DTG Sbjct: 154 TNMDEFAMGSTTETSYFGPTKNPWNL-----EHVPGGSSGGSCAAVAAEEAPYALGSDTG 208 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP+SF G VGIKPTYG SR G+I++ SLDQ G + + V D A +L+ IA YD Sbjct: 209 GSIRQPSSFCGVVGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILETIASYDPK 268 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ AL ++GM +GIPK+Y D L + + Q + L++ GA + E Sbjct: 269 DSTSIKRESYDFTSALVDDVKGMRIGIPKDYFGDGLDAEVKENILQAVKVLEEKGAVVEE 328 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVK 360 L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E + L MY+ +RS GFG EVK Sbjct: 329 FDLSLVKYAIPAYYVIASAEASSNLARFDGVKYGYRTEEYEGLHNMYKKSRSEGFGPEVK 388 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+G++VLSS YD++YL+A K + LIK+ F +AFE+ DVI+ P PT+A LGK Sbjct: 389 RRIMLGSFVLSSGYYDAYYLKALKTKALIKKAFDKAFEK-YDVIVAPAAPTTAPELGKSL 447 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D++T++VN+AGLP I++P K +P+G+QLIG F E + Sbjct: 448 SDPIKM--YLGDIYTISVNLAGLPGITIPVGKDSKGLPVGMQLIGNCFEENKIIQTAYTF 505 Query: 481 EKEAGYFRPH 490 E+ Y P Sbjct: 506 EQTKAYEAPE 515 >gi|28377926|ref|NP_784818.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus plantarum WCFS1] gi|38257521|sp|Q88XP7|GATA_LACPL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|28270760|emb|CAD63665.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus plantarum WCFS1] Length = 487 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/475 (44%), Positives = 301/475 (63%), Gaps = 13/475 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 L +K ISA EL + + + ++ A++ + ++A A D+ I DA ++ GI Sbjct: 15 LVAKKISATELAKATFANMNQVDPKLGAFLNLNEEQALQQAAALDQDGI--DANNVFAGI 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKG+ T A S +L+ F P Y +TV KL + A+++GK NMDEFAMG S E Sbjct: 73 PMAVKDNIVTKGLTTTAASKMLENFVPVYNATVVDKLLASNALIVGKTNMDEFAMGGSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS + +PW PGGSSGGS+ AVA ++G+DTGGSIRQP+SF G V Sbjct: 133 TSAFHVTRNPWDI-----SRVPGGSSGGSAVAVASGQVPVALGSDTGGSIRQPSSFNGIV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV+D+A L IAG D D T VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPMTRTVKDNAAALNMIAGNDVHDTTSSKQTVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L I+GM +G+PKEY D + P + + QQ + +D GA + E+SLP+++Y + AY Sbjct: 248 AGLTGDIKGMKIGLPKEYMGDGIDPKVREVIQQAVKQFEDLGATVEEVSLPNSRYGVAAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 308 YIIASSEASSNLQRFDGIRYGFRADDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLSAG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A ++RT+I DF + FE D+I+ P PT AF LG E ++ +M NDV Sbjct: 368 YYDAYFHKAGQVRTMIINDFNKVFED-YDLIMGPVAPTPAFKLGDELSDPITM--YMNDV 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +SVPA + +P+GLQLIG+ F E T++ G E+ ++ Sbjct: 425 LTIPVNLAGLPGMSVPAGFAD-GLPVGLQLIGKAFDESTMYRAGYAFEQATQVYK 478 >gi|290967940|ref|ZP_06559490.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Megasphaera genomosp. type_1 str. 28L] gi|290782079|gb|EFD94657.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Megasphaera genomosp. type_1 str. 28L] Length = 488 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/478 (46%), Positives = 308/478 (64%), Gaps = 10/478 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + ++L ++++AV L ++Y++ + Q+ A++ ++A A D +I G Sbjct: 4 MTIHALHEKLVQRELTAVALTEAYLKHKDTVEPQIQAFLSDTREEALQTAAAVDAKIKAG 63 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +L GIP IKD +G S +L+ F+ Y +TV +KL + LGK NMD Sbjct: 64 KPVSELAGIPAAIKDNICIRGQQATCASRMLENFKAPYHATVIEKLAAQDYISLGKTNMD 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +P R D + PGGSSGGS+AAV C ++G+DTGGSIR Sbjct: 124 EFAMGSSTENSAFQVTHNP-RHTD----YVPGGSSGGSAAAVGAGECVWALGSDTGGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA++ G VG+KPTYG SR G+I++A SLDQ G +T+ V D AI+L AIAGYDE D+T Sbjct: 179 QPAAYCGVVGMKPTYGLVSRYGLIAYASSLDQIGPLTQDVTDCAIVLNAIAGYDEKDSTS 238 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + DY+ AL + ++GM +GIP E+ D LS + + I K GA+IV + +P Sbjct: 239 IKREHNDYKTALVRDVKGMKIGIPDEFFGDGLSDGCRQALTEAIETYKSLGAEIVHVKMP 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 H +Y L AYYII+PAEASSNLARYDGV +GLRV GK+I++MYE TRS GFG EV+ RI++ Sbjct: 299 HMKYGLAAYYIIAPAEASSNLARYDGVGFGLRVPGKNIVDMYEKTRSAGFGPEVRRRILL 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLS+ YD++YLRA K+RTL+KRD+ EA Q DV+LTPT P +AF +G E+ + Sbjct: 359 GTYVLSAGYYDAYYLRAMKVRTLVKRDYEEALRQ-CDVLLTPTAPGTAFKIG--EHTADP 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + DV TV +N+AGLP IS+P + +P+G+QLIG+ EETL V E+E Sbjct: 416 LAMYLGDVCTVTLNLAGLPGISLPCGH-QDGLPVGMQLIGKALAEETLLRVAYTFEQE 472 >gi|301066106|ref|YP_003788129.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit [Lactobacillus casei str. Zhang] gi|300438513|gb|ADK18279.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit [Lactobacillus casei str. Zhang] Length = 484 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/481 (46%), Positives = 316/481 (65%), Gaps = 11/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + ++LRS +++ +LVD + I +++++A++ + A A+ A D I Sbjct: 7 SIDQLHEQLRSGKVTSSQLVDETLAGINQLDAEVDAFLALNADGAKEKAAAVDAAGIAD- 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PI IKD TKG+ T A S +L F P Y++TV QKL GA+ +GK NMDEF Sbjct: 66 DQPLAGVPIAIKDNIVTKGVVTTAASKMLANFNPIYDATVMQKLDAAGAINVGKTNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + + W D T PGGSSGGS+AAVA A++G+DTGGSIRQP Sbjct: 126 AMGSSTENSAFKTTKNAW---DHTR--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+I+F+ SLDQ G +TR V+D+A LL IAG+DE D+T + Sbjct: 181 AAFNGIVGVKPTYGRVSRWGLIAFSSSLDQIGTLTRHVKDAAQLLNVIAGHDERDSTTAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 PVPD+ + Q I+GM + +PKEY + P I + +D GA + E+SLPHT Sbjct: 241 TPVPDFTAKIGQDIKGMKIALPKEYLGKGVDPAIADKIKAAAKQFEDMGATVTEVSLPHT 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 QYA+P+YYII+ +EASSNL R+DG+RYG R + K+I ++Y +RS GFG EVK RIM+G Sbjct: 301 QYAVPSYYIIASSEASSNLQRFDGIRYGFRAKDVKNIEDVYVRSRSEGFGPEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD+++ +A ++RTLI RDF + F+ D+I+ PTTPT AF +G++ + +M Sbjct: 361 TFSLSAGFYDAYFKKAGQVRTLITRDFEDVFKD-YDLIIGPTTPTVAFKIGEKVTDPVTM 419 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AGLPA SVPA + MP+GLQLIG+ F E T+F V E + Y Sbjct: 420 --YMNDILTIPVNLAGLPAASVPAGFVD-GMPVGLQLIGKHFDESTIFQVAAAFEAQNDY 476 Query: 487 F 487 Sbjct: 477 L 477 >gi|315222435|ref|ZP_07864336.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus anginosus F0211] gi|315188459|gb|EFU22173.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus anginosus F0211] Length = 488 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 312/486 (64%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + E D L K++SAVEL + ++ I++ S ++++I + ++A A A D + Sbjct: 3 LNQKTIEELHDLLVKKELSAVELTKATLEDIKSRESAVDSFITISEEEALAQAAAVDTKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLHEKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W D+T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAW---DTTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G +TV+++A LL IAG D+ D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFAQTVKENAQLLGVIAGNDKKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+G+ + +PKEY + + + + L+ GA + E+S Sbjct: 237 TSSQRTVPDFTSKIGQDIKGLKIALPKEYMGEGIDEKVKERILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRADEIENLEDVYVKSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + ++ Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGTQSHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F EET++ V E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|259047688|ref|ZP_05738089.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Granulicatella adiacens ATCC 49175] gi|259035879|gb|EEW37134.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Granulicatella adiacens ATCC 49175] Length = 485 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/493 (45%), Positives = 321/493 (65%), Gaps = 12/493 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + + E + LR+K+ ++VEL + I ++ A++ + ++A A +D Sbjct: 1 MSIIENKTLVELHEGLRNKEFTSVELTKETFERIHVLEPKVEAFVTLNEEEALKQAAAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ L+G+PIGIKD T+ + T A S +L+ F P Y++ V + L GAV +G Sbjct: 61 EKGY-GEEASLQGLPIGIKDNIVTRDLLTTASSRMLEDFNPIYDAHVMELLKAEGAVNVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ +PW D T PGGSSGGS+AAVA AS+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNPW---DLTK--VPGGSSGGSAAAVASGEVLASLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTG VG+KPTYGR SR G+I+FA SLDQ G TRTV+D+A++L AI+GYD Sbjct: 175 GGSIRQPASFTGIVGMKPTYGRISRYGLIAFASSLDQIGPFTRTVQDNALVLSAISGYDH 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V VP Y + L I+GM + +PKEY + + + + ++ GA + Sbjct: 235 RDSTSVPQEVPAYHKGLTGDIKGMRIALPKEYFAEGVDAQVQAAVLKAADQYREMGAIVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 E+SLPH++Y +PAYYII+ +EASSNL R+DG+RYG R E + + ++Y +RS GFG EV Sbjct: 295 EVSLPHSKYGIPAYYIIASSEASSNLQRFDGIRYGHRSTEAETLEDLYVKSRSEGFGMEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LSS YD+++ +A ++RTLIK+DF + FE D+IL P T ++AF LG+ Sbjct: 355 KRRIMLGTFSLSSGYYDAYFKKAGQVRTLIKQDFAKVFEN-YDLILGPVTTSAAFGLGEH 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ +M D+ TV VN+AGLPAISVPA + +P+G+QLIG F+E+T++ Sbjct: 414 SDDPLAM--YMADLLTVPVNLAGLPAISVPAGFTSEGLPVGIQLIGNYFQEKTIYQAAYA 471 Query: 480 IEKEAGYF--RPH 490 E+ Y+ RP Sbjct: 472 FEQANDYYLRRPQ 484 >gi|299139421|ref|ZP_07032596.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium sp. MP5ACTX8] gi|298598690|gb|EFI54853.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium sp. MP5ACTX8] Length = 484 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/481 (46%), Positives = 312/481 (64%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +++S +R + +SA L + + I + +N+Y+ + ++A A AE D Sbjct: 6 QLETLSLSAARTAVVEGRVSAASLAAEHYERIATVDPAINSYLALSRERAMAQAERVDAA 65 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G A L G+PIGIKD +G A S IL G+ P Y++T KL GAV+LGK Sbjct: 66 AKAGTALGPLAGVPIGIKDVLTMRGAPATAGSLILKGYHPPYDATCVAKLEAAGAVLLGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN DEFAMGSSNE S YGPV +P R++D PGGSSGGS+AAVA LC AS+GTDTG Sbjct: 126 LNCDEFAMGSSNENSAYGPVHNP-RALDRV----PGGSSGGSAAAVAAGLCVASLGTDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+ PTYGR SR G+I+FA SLD+ G TR+V D+A +L +AG D Sbjct: 181 GSIRQPAAFCGVVGVLPTYGRVSRYGLIAFASSLDRVGPFTRSVADAATMLDVLAGPDPL 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT PV +Y + + G+ +G+P+EY + L P I ++ + L+ AG I + Sbjct: 241 DATSSPQPVANYTAEAAKPVAGLRIGVPEEYFGEGLDPEIRAAIEKSLDDLRAAGCSIHK 300 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVK 360 +SLPHT+YA+P YY+I+ AEASSNL+R+DGVRYGLR E + L M+ +R GFG EVK Sbjct: 301 VSLPHTRYAVPTYYVIATAEASSNLSRFDGVRYGLRAEDANTLAAMFRKSRDEGFGAEVK 360 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY LS+ YD++Y +A+++RTL+ RDF AF Q VD I+ P TPT AF LG++ Sbjct: 361 RRILLGTYALSAGYYDAYYRKAQQVRTLLTRDFLSAFTQ-VDAIVCPVTPTPAFKLGEKT 419 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+++VA ++AG+ +SVP + +P+G+Q++G+ F E T+ VG + Sbjct: 420 DDPIQM--YLEDIYSVAASLAGICGMSVPCGTTQAGLPIGVQILGRHFDEGTMLRVGAAV 477 Query: 481 E 481 E Sbjct: 478 E 478 >gi|281418203|ref|ZP_06249223.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum JW20] gi|281409605|gb|EFB39863.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium thermocellum JW20] Length = 486 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/482 (47%), Positives = 311/482 (64%), Gaps = 17/482 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE RL+S++ISA+EL +YI AIE N +NAY+ + A AAE++D+R+ G A Sbjct: 5 ISELAKRLQSREISAMELTKAYIGAIEKLNPTINAYVYLTFDTAMKAAEKADQRLKEGGA 64 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD T G++T CS IL GF+P+Y++TV +KL +GAV+LGK NMDEFA Sbjct: 65 PLLCGIPMALKDNICTDGLNTTCCSKILKGFKPYYDATVWEKLKAHGAVLLGKTNMDEFA 124 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS++ETS YG ++P + + GGSSGGS+AAV L S+G+DTGGSIRQPA Sbjct: 125 MGSTSETSCYGAPLNPRNT-----NYVTGGSSGGSAAAVCANLAVYSLGSDTGGSIRQPA 179 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYG SR G+I++ SLDQ G +T +V+D+AI+ AI G D D T V+ Sbjct: 180 SFCGVVGLKPTYGAVSRYGLIAYGSSLDQIGPMTNSVKDAAIVFDAIKGGDRRDQTSVDY 239 Query: 249 PVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY LD+ ++GM +G+ +E+ D ++P I ++ I + GA I I L Sbjct: 240 ---DYGSSLAECLDRDVKGMRIGVAEEF-FDGINPEIKSKIEEAIKLFERNGAVIENIRL 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 P + ALP YYII+ AEASSNL RYDG+RYG R I +M TRS GFG EVK RI Sbjct: 296 PALKLALPVYYIIACAEASSNLGRYDGIRYGYRTSSYTSIEDMIVKTRSEGFGDEVKRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTYVLSS YD++Y +A IR I R+F FE+ DV++ PT P +AFPL + + Sbjct: 356 MLGTYVLSSGYYDAYYKKACLIREEINREFDAVFEK-CDVLVAPTAPNTAFPLNYK--GA 412 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 G + +D+ TV VN+AG+PAISVP +P+G+Q+IG+ F E T+ E+ Sbjct: 413 GPVEMYLSDICTVPVNIAGVPAISVPCGEDSNGLPVGMQIIGKKFDEATVLQAAHFYEQS 472 Query: 484 AG 485 AG Sbjct: 473 AG 474 >gi|326804255|ref|YP_004322073.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651043|gb|AEA01226.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 483 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/477 (46%), Positives = 314/477 (65%), Gaps = 10/477 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +I+AVELV S I I+ + A++ + + A AAA+ SD++ + D R L+GI Sbjct: 14 QLVDGEITAVELVQSTIDRIKELDETYKAFLTLDEEGALAAAKASDEKGYSTD-RPLQGI 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PIGIKD T+GI T A S IL+GF P Y+S V + L GA+ +GKLN+DEFAMGSS E Sbjct: 73 PIGIKDNIITEGIETTASSKILEGFVPVYQSAVVEALEAAGAITIGKLNLDEFAMGSSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TSY+GP +PW + PGGSSGGS+AAVA AS+G+DTGGSIRQPA++ G V Sbjct: 133 TSYFGPSKNPWDT-----SRVPGGSSGGSAAAVASGEVVASLGSDTGGSIRQPAAYNGIV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV D+A++L AIAG+D D+T ++ VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPMTRTVEDNALVLNAIAGHDHRDSTTADIEVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L SI+G+ + +P+E+ + + + ++ I L+ GA + ++ P +Y +P Y Sbjct: 248 AQLGDSIEGLRIAVPEEFFTNGIEADVQDRVEKAIDQLESMGAIVEKVHFPLLKYGIPVY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL R+DGVRYG R + +D+ ++Y +RS GFG EVK RIM+GT+ LSS Sbjct: 308 YIVASSEASSNLQRFDGVRYGYRADDIQDLEDLYVRSRSEGFGDEVKMRIMLGTFSLSSG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A K+RTLI+++F E FE+ DV+ P T ++AF G++ ++ M D+ Sbjct: 368 YYDAYFKKAGKVRTLIRQEFEELFEK-YDVVAGPVTTSTAFKFGEKSDDPIEM--YLADL 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 TV VN+AGLP+ISVP +P+GLQLIG F E TL+ E+ + H Sbjct: 425 LTVPVNLAGLPSISVPCGFDSDNLPIGLQLIGNYFDEATLYKTAYAYEQATDHHTKH 481 >gi|326692437|ref|ZP_08229442.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leuconostoc argentinum KCTC 3773] Length = 490 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/478 (47%), Positives = 306/478 (64%), Gaps = 14/478 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESDKRIINGDARDL 71 D+L +D+ AVELV + I + ++ A+I + A+ E DK+ + L Sbjct: 14 HDKLVKQDVRAVELVQGALDNIAKVDDKLEAFIMTNPEATLLQAQAEDDKQDFT---QTL 70 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP +KD AT+GI T SHIL+GF+P Y +TV KL GAV +GK NMDEFAMG Sbjct: 71 AGIPFALKDNLATEGIQTTGASHILEGFKPVYNATVVDKLKTVGAVSVGKTNMDEFAMGG 130 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S ETSYY + W D T PGGSSGGS+AAVA L ++G+DTGGSIRQPA+F Sbjct: 131 STETSYYKTTTNAW---DQTK--VPGGSSGGSAAAVAAGLVPFALGSDTGGSIRQPAAFN 185 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+ + A SLDQ G TRTV+D+A++L AI+G+D D+T VP Sbjct: 186 GIVGLKPTYGRVSRWGLFAMASSLDQVGPFTRTVKDNALVLNAISGFDAKDSTSSEREVP 245 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 D+ L ++G+ + +PKEY + + P + T + I+ L+ GA + E+SLPHT+Y + Sbjct: 246 DFTAQLTGDVKGLKIAVPKEYFGEGIDPKVASTVKAAIAQLEALGATVDEVSLPHTKYGV 305 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII +EASSNL RYDGVRYG R + K++ E+Y TRS GFG EVK RIM+GT+ L Sbjct: 306 AAYYIIMSSEASSNLQRYDGVRYGFRADDVKNLEELYIKTRSEGFGDEVKRRIMLGTFSL 365 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S+ YD+ + +A KIRTL+ DF + F DVI+ PT PT A+ LG+E ++ +M Sbjct: 366 SAGAYDAFFKKAAKIRTLLIEDFNKVFAD-YDVIVGPTAPTVAYGLGEEVDDPTAM--YL 422 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 DV T+ VN+AGLP +SV A + +P+GLQ+IG+PF E T++ G E+ + F Sbjct: 423 ADVLTIPVNLAGLPGMSVNAGFVD-GLPVGLQIIGRPFDEATVYQTGYAFEQTSRLFE 479 >gi|260584781|ref|ZP_05852526.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Granulicatella elegans ATCC 700633] gi|260157438|gb|EEW92509.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Granulicatella elegans ATCC 700633] Length = 485 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 221/488 (45%), Positives = 321/488 (65%), Gaps = 10/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + + L K ++ EL + + I+ + ++ A++ + ++A A A+ +D Sbjct: 1 MSLLENQTLVSLHEGLVQKKFTSQELTSATFEKIQAVDDKVGAFLALNEEEAMAQAKAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ + A L+G+PIGIKD T+ + T A S +L+ F P Y++ V L GAV +G Sbjct: 61 EKGYD-SALSLQGLPIGIKDNIVTRDLITTAASRMLEDFNPIYDAHVMDLLKKTGAVNVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S E SY+ +PW D T PGGSSGGS+AAVA A++G+DT Sbjct: 120 KLNMDEFAMGGSTENSYFKKTRNPW---DLTK--VPGGSSGGSAAAVAAGEVLATLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASFTG VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A++L+AI+GYD Sbjct: 175 GGSIRQPASFTGIVGMKPTYGRVSRYGLIAFASSLDQIGPLTRTVKDNALVLEAISGYDH 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VN+PVP+Y + ++ +I+G+ + +P EY D + P I K + + GA + Sbjct: 235 RDSTSVNVPVPNYYQQINGNIKGLKIALPVEYLGDGIDPEIRKAVLKAAEQYRALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 E+SLPH++Y +PAYYII+ +EASSNL R+DG+RYG R E K + ++Y +R+ GFG EV Sbjct: 295 EVSLPHSKYGIPAYYIIASSEASSNLQRFDGIRYGHRSAEAKTLEDLYIMSRTEGFGMEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LSS YD+++ +A ++RTLIK+DF F D+IL P T ++A+ +G Sbjct: 355 KRRIMLGTFSLSSGYYDAYFKKAGQVRTLIKQDFANVFAN-YDLILGPVTTSTAYGIG-- 411 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E N + D+ TV VN+AGLPAISVPA + +P+G+QLIG F+E+T++ Sbjct: 412 ERNDDPIEMYMADLLTVPVNLAGLPAISVPAGFSSEGLPIGIQLIGNYFQEQTIYQAAFA 471 Query: 480 IEKEAGYF 487 E+ Y+ Sbjct: 472 FEQANDYY 479 >gi|300868156|ref|ZP_07112788.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Oscillatoria sp. PCC 6506] gi|300333780|emb|CBN57968.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Oscillatoria sp. PCC 6506] Length = 487 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/480 (47%), Positives = 312/480 (65%), Gaps = 13/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +K+ SAVE+ + + ++ +++ V A KA A + D +I G+ Sbjct: 3 SIRELHQQLVNKERSAVEIAQEALDRVHQLEPKLRSFLHVTADKALEQARKVDAQIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPI +KD T+GI T S IL F P Y++TV KL GAV LGK NMDE Sbjct: 63 NIGLLAGIPIAVKDNMCTQGIPTTCGSRILKDFVPPYDATVVSKLEATGAVCLGKTNMDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETS Y +PW + PGGSSGGS+AAVA C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTETSAYQLTANPWDL-----ERVPGGSSGGSAAAVAARECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G RTV D+AI+L AIAGYD D+T + Sbjct: 178 PASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFGRTVEDAAIMLGAIAGYDSKDSTSL 237 Query: 247 NLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N+ VPDY AL +++ + +G+ KE L ++K + I +++ GA+I IS Sbjct: 238 NVSVPDYLTALRPNLRPKGQIRIGVIKETFGVGLDSVVEKAVTKAIEKMQELGAEIQVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P +Y LP YYII+P+EAS+NLARYDGV+YG R D +LEMY TR+ GFG EVK R Sbjct: 298 CPRFRYGLPTYYIIAPSEASANLARYDGVKYGFRTPDPDNLLEMYAKTRAEGFGTEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK DF +AF Q VD+++ PT PT+AF G++ ++ Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKVRTLIKEDFDKAFAQ-VDILVCPTAPTTAFKAGEKTDD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ T+ VN+AGLPA+S+P E MP+G+Q+IG+ +E LF V E+ Sbjct: 417 PLSM--YLSDLMTIPVNLAGLPALSMPCGFDENGMPIGMQMIGKVLQESRLFEVAYAYEQ 474 >gi|330501856|ref|YP_004378725.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas mendocina NK-01] gi|328916142|gb|AEB56973.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas mendocina NK-01] Length = 483 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/476 (47%), Positives = 306/476 (64%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L +K SA EL S + IE + Q+N++I V A A+ +D R Sbjct: 1 MHQLTLAEIAKGLAAKQFSAEELTRSLLTRIEQLDPQLNSFITVTQDLALQQAKAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G PI KD F T G+ T S IL GF+ Y++TV KL G V LGKLN Sbjct: 61 SAGENGALLGAPIAHKDLFCTNGVLTSCGSKILTGFKAPYDATVVDKLKSAGTVTLGKLN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YGPV +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGPVKNPWDT-----SRVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T GIKPTYGR SR G+I++A SLDQ G + RT D +LL A+AG+D D+ Sbjct: 176 IRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCTLLLGAMAGFDPKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V+ PV DY AL Q + G+ +G+PKEY L I + + LK GA + +IS Sbjct: 236 TSVDQPVDDYLAALAQPLAGLRIGLPKEYFGAGLDARIGEKVMAVVEELKKLGASVKDIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E LE +Y+ +R GFG EVK R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPVNLEDLYKRSRGEGFGAEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++Y++A++IR LIK DF AF VDVIL PTTP A+ +G E Sbjct: 356 IMVGTYALSAGYYDAYYIKAQQIRRLIKNDFVAAFND-VDVILGPTTPNLAWKIG--EKG 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AG+P +S+PA + +P+G+QL+G F+E L +V Sbjct: 413 GDPVSAYLEDIYTITANLAGIPGLSMPAGFVD-GLPVGVQLLGNYFQEGRLLNVAH 467 >gi|323705995|ref|ZP_08117565.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323534609|gb|EGB24390.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 489 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/482 (47%), Positives = 318/482 (65%), Gaps = 11/482 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ + + E + LR K++SAV++ +Y++ I +++A I A AEE+DK Sbjct: 2 ELHELTIHELNELLRKKEVSAVDVTKAYLKRINEVEPKVDALICETEDFALKKAEEADKM 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I +G+ DL GIP+ IKD T+ I T S +L+ F P Y +TV + L + GAVM+GK Sbjct: 62 IKDGNINDLTGIPVVIKDNMCTENIRTTCASKMLEDFVPPYNATVVENLNNLGAVMVGKA 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW + PGGSSGGS+A+VA CA S+G+DTGG Sbjct: 122 NLDEFAMGSSTENSAFKTTKNPWDL-----ERVPGGSSGGSAASVAADECAFSLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+++FA SLDQ G IT+ V D AI+L AIAG+D D Sbjct: 177 SIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPITKDVTDCAIVLNAIAGHDPKD 236 Query: 243 ATCV-NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +T V N+ DY+ L I+GM +G KE+ L + K+ + + ++ GA+I E Sbjct: 237 STSVDNVRKSDYKDFLKDDIKGMKIGYAKEFFRQGLDEGVRKSIEDALKIFEELGAEIRE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 ISL + YAL AYYI++ AEASSNLARYDG+RYG E +D+++MY +RS GFG+EVK Sbjct: 297 ISLKYMDYALAAYYIVASAEASSNLARYDGIRYGHAAEKYEDLIDMYMVSRSEGFGKEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y +A K+RTLIK+D+ AF Q VDVI+ PT+PT+AF +G+ Sbjct: 357 RRIMLGTYALSSGYYDAYYNKALKVRTLIKQDYERAF-QDVDVIIGPTSPTTAFKIGERV 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + +M DV+TV VN+AGLP +S+P L + +P+GLQ++G+ F E T+ + Sbjct: 416 EDPLAM--YLADVYTVPVNIAGLPGLSLPCGLSD-GLPVGLQIVGKHFDEGTILNAAYAF 472 Query: 481 EK 482 EK Sbjct: 473 EK 474 >gi|301118442|ref|XP_002906949.1| glutamyl-tRNA(Gln) amidotransferase subunit, putative [Phytophthora infestans T30-4] gi|262108298|gb|EEY66350.1| glutamyl-tRNA(Gln) amidotransferase subunit, putative [Phytophthora infestans T30-4] Length = 540 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 231/494 (46%), Positives = 310/494 (62%), Gaps = 25/494 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 L S D+SAVEL + I +E + + N ++ ++A A+ SD+R + G + L +GI Sbjct: 36 LASGDVSAVELTQTCIHQVEKTRA-FNMFVSTDFERALQLAKASDERRVAGQSLGLLDGI 94 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PIG+KD F + + T A S IL+ F YEST T++L D GAV LGKLNMDEFAMGS Sbjct: 95 PIGVKDLFCMENVPTTAASKILENFVSPYESTATKRLLDQGAVPLGKLNMDEFAMGSGTL 154 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA-ASIGTDTGGSIRQPASFTGT 193 S +G I+PW S D DK G S G SAA C A++G+DTGGS+RQPA++ G Sbjct: 155 YSKFGATINPW-SKDLRDKAVVAGGSSGGSAAAVASGCCFAALGSDTGGSVRQPAAYCGI 213 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP-- 251 VG+KP+YGR SR G+IS+A SLD GI R+V D+ +L+AIAG D D+TC+ +P Sbjct: 214 VGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDATAVLQAIAGPDHMDSTCMTDALPGN 273 Query: 252 ---DYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + A QS + G+ VG+P EY + L I W +G++WL+DAGA+ V +SL Sbjct: 274 WCTNTVEASQQSKKVDLTGVRVGVPAEYFVKELPEEILNVWDEGVAWLRDAGAQAVSVSL 333 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK---------DIL-EMYENTRSIG 354 P T+ +PAYYI++ AEASSNL+RYDGVRYG R + K D L ++Y TRS G Sbjct: 334 PTTKLCIPAYYILACAEASSNLSRYDGVRYGYRAKDKVLETQEDQSDALHDLYCRTRSEG 393 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSA 413 FG+EV+ RI+ GT+VLS+ +Y R +R I++DF F EQGVDV+LTPTTP+ Sbjct: 394 FGEEVQRRILSGTFVLSAGAMSDYYERGVILRQRIRQDFQRVFEEQGVDVLLTPTTPSGP 453 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 FP+ ++ + NDV TV NMAG+PAISVPAAL + PLGLQL+G EE Sbjct: 454 FPVHNKQAKEDPVSMYLNDVMTVPANMAGVPAISVPAALTSDGDYPLGLQLMGARKTEER 513 Query: 473 LFSVGQIIEKEAGY 486 L V +E+ AG+ Sbjct: 514 LLQVANALEQRAGF 527 >gi|186681771|ref|YP_001864967.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nostoc punctiforme PCC 73102] gi|229485992|sp|B2IYD7|GATA_NOSP7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|186464223|gb|ACC80024.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nostoc punctiforme PCC 73102] Length = 486 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/480 (47%), Positives = 311/480 (64%), Gaps = 13/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L K+ SAVE+ ++ IE ++++++ V A++A A D +I G+ Sbjct: 3 SIRELHQQLVKKERSAVEITQEALERIEALEPKLHSFLCVTAERALEQAGAVDAKIAAGE 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+GIKD TKGI T S IL+ F P YEST TQKL D GAVM+GK N+DE Sbjct: 63 EIGLLAGIPVGIKDNLCTKGIPTTCASRILENFVPPYESTATQKLADAGAVMVGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S Y +PW PGGSSGGS+AAV+ C ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAYQVTANPWNL-----SRVPGGSSGGSAAAVSSQECVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G TV D+AILL AIAG+D D+T + Sbjct: 178 PASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFANTVEDAAILLNAIAGHDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + +P+Y + + + +GI KE + L +++ + + L+ GA+I IS Sbjct: 238 KVAIPNYAASFKPDFKPRGQLRIGIVKETFGEGLDSVVEQAVTKAVDVLQSLGAEIHIIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P +Y LP YYII+P+EAS+NLARYDGV+YG R D +L MY TR+ GFG EVK R Sbjct: 298 CPRFRYGLPTYYIIAPSEASANLARYDGVKYGYRAPDADNLLSMYTRTRATGFGTEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IMIGTY LS+ YD++YL+A+K+RTLIK DF +AF + VDV++ PT+PT+AF G++ + Sbjct: 358 IMIGTYALSAGYYDAYYLKAQKVRTLIKEDFEKAF-RVVDVLVCPTSPTTAFKAGEKTTD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D+ T+ VN+AGLP++S+P ++ +P+GLQLIG RE+ LF V E+ Sbjct: 417 PLSM--YLTDLMTIPVNLAGLPSLSLPCGFDDQGLPIGLQLIGNVLREDQLFQVAYAYEQ 474 >gi|332366169|gb|EGJ43925.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK1059] Length = 488 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGSFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAQHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|118594297|ref|ZP_01551644.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Methylophilales bacterium HTCC2181] gi|118440075|gb|EAV46702.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Methylophilales bacterium HTCC2181] Length = 484 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/483 (46%), Positives = 314/483 (65%), Gaps = 10/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ + +LR K S+ EL ++ I+ N ++NA+I + +++ + A+++D I NG Sbjct: 4 LSLKQLSQQLREKAFSSEELTRFFLDRIKKHNDRLNAFITINEEESLSMAKKADITIANG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + GIPI KD F G T S +L+ F Y +TV Q D GA+ LGK NMDE Sbjct: 64 NQSLFTGIPIAQKDIFCADGWRTTCGSKMLENFVAPYNATVIQNFNDAGAINLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNETSY+G V +PW ++ PGGSSGGS++AVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSSNETSYFGAVKNPWNL-----EYVPGGSSGGSASAVAARLAPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G G+KPTYG SR G+I+FA SLDQAG + + D A++L +A +D D+T + Sbjct: 179 PASLCGFTGLKPTYGLVSRYGMIAFASSLDQAGPMAPSAEDCAMMLNVMASHDIKDSTSL 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P DY +L SI G+ +GIPKE+ + L + K + I + GA+IV+ISLP+ Sbjct: 239 PHPKEDYMTSLGDSIDGLRIGIPKEFFGEGLDSEVQKIIEDAILEYQKMGAEIVDISLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 ++ A+P YY+I+PAEASSNL+RYDGVRYG R E D+++MY TR GFG EVK RI+I Sbjct: 299 SELAIPVYYVIAPAEASSNLSRYDGVRYGYRTKEYDDLMDMYFKTRQEGFGDEVKRRILI 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLS+ YD++YL+A+KIR LI DF +AF Q DVI+ P+ P++AF G+++ + + Sbjct: 359 GTYVLSAGYYDAYYLKAQKIRQLISNDFAQAF-QKCDVIMGPSAPSAAFKAGEKKEDPLA 417 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M D++T++ N+AGLPA+S+PA K +P+GLQLIG F E L +V + Sbjct: 418 M--YLQDIYTISTNLAGLPAMSIPAGFT-KDLPVGLQLIGNYFSEGHLLNVAHQFQLSTE 474 Query: 486 YFR 488 + R Sbjct: 475 WHR 477 >gi|315924262|ref|ZP_07920486.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudoramibacter alactolyticus ATCC 23263] gi|315622423|gb|EFV02380.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudoramibacter alactolyticus ATCC 23263] Length = 483 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/492 (45%), Positives = 311/492 (63%), Gaps = 16/492 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + + E+ D L ++S ++ +Y I++ + Q++A++ +A AA+ D++ Sbjct: 2 DITRLTIHETLDLLNQGELSVFDVAQTYTDRIKSLDGQLDAFLLDHTAQALEAAKTMDQK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+A L GIP +KD T GI T A S IL F P Y + V +L +GAVMLGK+ Sbjct: 62 G-RGNAP-LAGIPYALKDNICTNGIRTTAASKILGNFVPPYNADVYNRLSQSGAVMLGKV 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT--PGGSSGGSSAAVAGFLCAASIGTDT 180 NMDEFAMGSS E S Y +PW FT PGGSSGGS+ AVA + A S+G+DT Sbjct: 120 NMDEFAMGSSTENSAYQTTKNPW-------DFTKVPGGSSGGSAVAVAADMAAFSLGSDT 172 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS G VG+KPTYG SR G+I+FA SLDQ G T+ V D+AI+L AIAG+D Sbjct: 173 GGSIRQPASLCGVVGLKPTYGLVSRYGLIAFASSLDQIGPFTKDVEDAAIVLNAIAGHDT 232 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +N+P DY L +QGM +G+ K D + P + K + + AGA+IV Sbjct: 233 KDSTSLNIPKKDYLAGLKDGVQGMKIGVMKSSFDDGVQPEVQKAVNDALDAYRAAGAEIV 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+ + + AL YYII+ AEASSNLARYDGVRYG+R E D ++MY TR+ GFG+EV Sbjct: 293 EVDFHYLKQALAVYYIIACAEASSNLARYDGVRYGVRAEEYTDYIDMYYQTRTQGFGEEV 352 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTY LSS YD++Y +A ++RTLI DF F Q DV+LTPT+ ++AF +G++ Sbjct: 353 KRRIMLGTYALSSGYYDAYYKKAMQVRTLIVEDFKSVFAQ-CDVMLTPTSASTAFGIGEK 411 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N M ND+FTV +N+AG+P IS+P L + +P+G+QL+G E+ + + Sbjct: 412 IGNPLDM--YLNDIFTVPMNIAGVPGISLPTTLDDAGLPIGIQLVGPVLGEDRILKAAHV 469 Query: 480 IEKEAGYFRPHK 491 +E A FR ++ Sbjct: 470 LE-SAMNFRQYQ 480 >gi|307544498|ref|YP_003896977.1| aspartyl-tRNA amidotransferase subunit A [Halomonas elongata DSM 2581] gi|307216522|emb|CBV41792.1| aspartyl-tRNA amidotransferase subunit A [Halomonas elongata DSM 2581] Length = 486 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/468 (47%), Positives = 319/468 (68%), Gaps = 11/468 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR+ + S+ EL + I+ + ++N++I V A++A AAA+ +D G+A L G+P Sbjct: 13 LRAGEFSSRELTQDLLGRIDRLDGRLNSFITVTAEQALAAADRADAARAAGEAGPLNGLP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F T+G+ T S +LD F Y++ V +KL G V LGK NMDEFAMGSSNE Sbjct: 73 LALKDIFCTRGVKTSCGSRMLDNFAAPYDAGVVEKLTAAGTVSLGKTNMDEFAMGSSNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW + PGGSSGGS+AAVA L A++GTDTGGSIRQPA+F G G Sbjct: 133 SFYGPVKNPWDL-----EAVPGGSSGGSAAAVAAGLVPAAMGTDTGGSIRQPAAFCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I++A SLDQAG + R+ D A LL A+AG+D D+TCV VPDY Sbjct: 188 LKPTYGRVSRYGMIAYASSLDQAGPLARSAADCAQLLGAVAGHDVRDSTCVARGVPDYTA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD + G+ +G+P+EY D LSP ++ ++ I + GA + ++SLPHT YA+PAYY Sbjct: 248 DLDAPLSGLKIGLPREYFGDGLSPEVESAVREAIKVFETLGATVRDVSLPHTHYAIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+RYDGVR+G R E D++++Y+ +R+ GFG+EVK RI+IGT+ LS Sbjct: 308 VIAPAEASSNLSRYDGVRFGHRCEDPADLIDLYKRSRAEGFGEEVKRRILIGTHTLSEGF 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D++Y +A+++R LI++DF +AF++ VDV++ P +PT AF LG N + D++ Sbjct: 368 FDAYYKKAQQVRRLIRQDFLDAFDE-VDVLMGPASPTPAFDLGA---NKDPVSMYLQDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+AVN+AG+P ISVPA + P+GLQ++G F E L +V ++ Sbjct: 424 TIAVNLAGIPGISVPAGFAGNR-PVGLQVLGTHFAEARLLNVAHQFQQ 470 >gi|254556110|ref|YP_003062527.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus plantarum JDM1] gi|254045037|gb|ACT61830.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus plantarum JDM1] Length = 487 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/475 (44%), Positives = 301/475 (63%), Gaps = 13/475 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 L +K ISA EL + + + ++ A++ + ++A A D+ I DA ++ GI Sbjct: 15 LVAKKISATELAKATFANMNQVDPKLGAFLNLNEEQALQQAAALDQNGI--DANNVFAGI 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKG+ T A S +L+ F P Y +TV KL + A+++GK NMDEFAMG S E Sbjct: 73 PMAVKDNIVTKGLTTTAASKMLENFVPVYNATVVDKLLASNALIVGKTNMDEFAMGGSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS + +PW PGGSSGGS+ AVA ++G+DTGGSIRQP+SF G V Sbjct: 133 TSAFHVTRNPWDI-----SRVPGGSSGGSAVAVASGQVPVALGSDTGGSIRQPSSFNGIV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV+D+A L IAG D D T VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPMTRTVKDNAAALNMIAGNDVHDTTSSKQTVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L I+GM +G+PKEY + + P + + QQ + +D GA + E+SLP+++Y + AY Sbjct: 248 AGLTGDIKGMKIGLPKEYMGEGIDPKVREVIQQAVKQFEDLGATVEEVSLPNSRYGVAAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 308 YIIASSEASSNLQRFDGIRYGFRADDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLSAG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A ++RT+I DF + FE D+I+ P PT AF LG E ++ +M NDV Sbjct: 368 YYDAYFHKAGQVRTMIINDFNKVFED-YDLIMGPVAPTPAFKLGDELSDPITM--YMNDV 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +SVPA + +P+GLQLIG+ F E T++ G E+ ++ Sbjct: 425 LTIPVNLAGLPGMSVPAGFAD-GLPVGLQLIGKAFDESTMYRAGYAFEQATQVYK 478 >gi|125717430|ref|YP_001034563.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus sanguinis SK36] gi|166217722|sp|A3CLF8|GATA_STRSV RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|125497347|gb|ABN44013.1| Glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Streptococcus sanguinis SK36] Length = 488 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEEVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGNHFDEATIYQTAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|88704050|ref|ZP_01101765.1| Amidase [Congregibacter litoralis KT71] gi|88701877|gb|EAQ98981.1| Amidase [Congregibacter litoralis KT71] Length = 499 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/476 (47%), Positives = 312/476 (65%), Gaps = 13/476 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L + S+V L ++ + I+ + +N++I V A+ A A E+D RI GDA L GIP Sbjct: 25 LAQGETSSVALTEAALARIDALDGGLNSFITVDAEGALREAREADARIARGDAGPLTGIP 84 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T+G+ T S +LDGF P Y++TV + + GAV++GK NMDEFAMGSSNE Sbjct: 85 IAHKDIFCTRGLRTSCGSRMLDGFAPPYDATVVARFREAGAVLIGKTNMDEFAMGSSNEN 144 Query: 136 SYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S+YG +PW RS PGGSSGGS+AA+AG L AA+ GTDTGGSIRQPA+F G Sbjct: 145 SFYGACANPWDRSR------VPGGSSGGSAAAIAGGLVAAATGTDTGGSIRQPAAFCGIT 198 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SRLG+I++A SLDQ G + R+ D A+LL A+A +D D+T V P DY Sbjct: 199 GLKPTYGLVSRLGMIAYASSLDQGGPMARSAEDCALLLGAMAAHDPRDSTSVQRPPQDYV 258 Query: 255 RALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L Q S++G+ +G+P+EY + L+ + + + GA + EISLP T ++PA Sbjct: 259 GGLQQHSMEGLRIGVPREYFGEGLNNDVAAVIDAALKEFEAMGATLKEISLPRTALSIPA 318 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+PAEAS+NL+RYDGVRYG R + D+ ++Y +R GFG EV+ RI++GTY LSS Sbjct: 319 YYVIAPAEASTNLSRYDGVRYGHRCQDPVDLEDLYTRSREEGFGDEVQRRILVGTYALSS 378 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +A+++R LI DF AFE VD+I PTTP AF LG + ++ +M D Sbjct: 379 GYYDAYYKKAQQVRRLIAGDFATAFES-VDIIAGPTTPGVAFKLGAKTSDPTAM--YLED 435 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ++T++VN+AGLPA+S+PA + +P+GLQLIGQ F E L + + + + R Sbjct: 436 IYTLSVNLAGLPAMSLPAGFSD-HLPVGLQLIGQHFDEARLLAAAHQFQLRSDWHR 490 >gi|318041278|ref|ZP_07973234.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. CB0101] Length = 486 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/481 (47%), Positives = 312/481 (64%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E R++L+ ++SA EL D ++ IE ++AY EV A++ARA A+ D G Sbjct: 1 MGIAEWREQLKRGEVSARELTDQHLSRIEAVEPSIHAYTEVTAERARADADRIDAARAAG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ IKD TKG+ T S +L+ F P YESTVT +LW GAV+LGK N+D Sbjct: 61 EQLPPLAGVPLAIKDNLCTKGVRTTCSSRMLEEFVPPYESTVTGRLWGAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +GP +PW +TDK PGGSSGGS+AAVA C S+G+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGPSRNPW----NTDK-VPGGSSGGSAAAVAAGECVGSLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G VG+KPTYGR SR G+++FA SLDQ G V D+A LL+ IAG D D+TC Sbjct: 176 QPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFANNVADAAELLQVIAGEDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVPDY AL Q + G+ VGI +E + + L P + + + L+ G ++VE+S Sbjct: 236 LKAPVPDYTAALQQPVAGLKVGIVRECFEAEGLDPEVKASVMAAANQLEALGCELVEVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R + + EM +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRAADAASLAEMTSRSRAEGFGDEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF VDV+LTPT+PT+AF G + Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDRAF-GSVDVLLTPTSPTTAFGFGAHAEDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ NMAGLPAIS+P +P+G+QLI +EE L V E+ Sbjct: 415 LAM--YLADLLTIPANMAGLPAISLPCGFDGAGLPIGVQLITGVLQEERLLQVAWHYEQA 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|229916720|ref|YP_002885366.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Exiguobacterium sp. AT1b] gi|259647216|sp|C4L690|GATA_EXISA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229468149|gb|ACQ69921.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Exiguobacterium sp. AT1b] Length = 480 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/480 (45%), Positives = 316/480 (65%), Gaps = 11/480 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V++ L+ +++ +LV IE ++ Q+ A++ + + A A+ D+ D Sbjct: 8 VAKLHTLLKEGEVTVTDLVKESFDRIEATDDQIGAFL-TLNEDAFEQAKRMDELAKMSD- 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PIG+KD TKG+ T S L+ F P +++TV ++L D GA+ +GKLNMDEFA Sbjct: 66 NPLFGMPIGVKDNIVTKGMRTTCASTFLENFVPAHDATVVERLHDAGALTIGKLNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S + PV +PW D T PGGSSGGS+A+VA S+G+DTGGSIRQPA Sbjct: 126 MGSSNENSAFKPVRNPW---DPTR--VPGGSSGGSAASVAAGQVLFSLGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ G VG+KPTYG SR G+++FA SLDQ G +TRTV D+A LL IAG+ + D+T + Sbjct: 181 AYCGVVGMKPTYGLVSRFGLVAFASSLDQIGPLTRTVEDNAYLLNTIAGHCDMDSTSAEV 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY AL+Q + GM +P+E+ + ++P + + ++ I LK GA I +S+P + Sbjct: 241 EVPDYTAALNQDLTGMKFALPEEFMAEGVAPGVREQIEKAIETLKSLGATIETVSIPSVK 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 YAL AYY+++ +EASSNLAR+DG+RYG R E + E++ +R GFG EVK RIM+GTY Sbjct: 301 YALSAYYLLASSEASSNLARFDGIRYGRRAEADTLDEVFTYSREQGFGDEVKRRIMLGTY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS YD+ Y +A+++RTL+K+DF + FE+ D I+ PT PT+AF LG++ ++ +M Sbjct: 361 ALSSGYYDAFYKKAQQVRTLMKQDFAKVFEE-YDAIVGPTAPTTAFKLGEQLDDPLTM-- 417 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ND+ T+ VN+ G+PAISVPA L E +P+GLQ+IG F E TL+ V E+ G F+ Sbjct: 418 YANDIMTIPVNLVGIPAISVPAGLSE-GLPVGLQIIGNYFDESTLYRVAHAFEQANGGFK 476 >gi|327473500|gb|EGF18920.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK408] Length = 488 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREVAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDGKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ + E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAVFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|327438555|dbj|BAK14920.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Solibacillus silvestris StLB046] Length = 487 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/486 (46%), Positives = 322/486 (66%), Gaps = 13/486 (2%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 ++ ++ L+S +++ +L IE + + A++ + ++A A A E D+ + Sbjct: 9 AQLQESLKSGELTIADLTKEAFDRIEKLDGDVQAFLALNKEQATAKAAELDQVPFE-ERG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PIG+KD T+G+ T S IL+GF P Y++T+ +KL D G + +GKLNMDEFAM Sbjct: 68 PLFGMPIGVKDNIVTEGLETTCASKILEGFMPIYDATIVKKLRDAGMITVGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSSNE S Y +PW PGGSSG S+AAVA S+G+DTGGSIRQPA+ Sbjct: 128 GSSNENSAYKTTKNPWNL-----SHVPGGSSGASAAAVAAGEVPFSLGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 + G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A+LL+AI+G DE D+T ++P Sbjct: 183 YCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALLLEAISGVDEMDSTSADVP 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VP+Y ALD +I+G+ + +PKE+ + + ++ + LK GA + E+SLPH++Y Sbjct: 243 VPNYAAALDGNIKGLKIAVPKEFLGEGVGEAAKQSVLDALEVLKGLGATVEEVSLPHSKY 302 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTY 368 AL AYYI+S +EASSNL+R+DG+RYG R E K++LE+Y+ +R+ GFG EVK RIM+GTY Sbjct: 303 ALAAYYILSSSEASSNLSRFDGIRYGYRSENAKNLLELYKQSRAEGFGDEVKRRIMLGTY 362 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A++ RTLIK D+ + FE DVI+ PT PT AF +G N M Sbjct: 363 SLSAGTYDAYYKKAQQARTLIKADYDKVFEN-YDVIIGPTAPTPAFAIGA--NIDDPMTM 419 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ND+ T+ +N+AG+PAISVP E +PLGLQ+IG+ F EETL+ V E++ + + Sbjct: 420 YANDILTIPINLAGVPAISVPCGF-ENGLPLGLQIIGKHFDEETLYRVAYAYEQQTDFAK 478 Query: 489 --PHKW 492 P W Sbjct: 479 QTPALW 484 >gi|27468503|ref|NP_765140.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus epidermidis ATCC 12228] gi|38372360|sp|Q8CRU3|GATA_STAES RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|27316050|gb|AAO05184.1|AE016749_130 glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus epidermidis ATCC 12228] gi|319399865|gb|EFV88112.1| glutamyl-tRNA [Staphylococcus epidermidis FRI909] gi|329726900|gb|EGG63358.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus epidermidis VCU144] Length = 485 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 325/483 (67%), Gaps = 13/483 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F ++ + + +++K+I ++V AIE ++ + +++ + + A AEE D+ + Sbjct: 3 IRFESIEKLTELIKNKEIKPSDVVKDIYAAIEETDPTIKSFLALDKENAIKKAEELDE-L 61 Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 D D L GIP+GIKD TK + T S +L+GF P YESTV KL D AV++GK Sbjct: 62 QAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHDENAVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTG Sbjct: 122 LNMDEFAMGGSTETSYFKKTLNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS+ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AI+G D Sbjct: 177 GSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDAN 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ + + I+G+ + +PKEY + +S + + ++ + LK GA++ E Sbjct: 237 DSTSAPVDDVDFTSDIGKDIKGLKIALPKEYLGEGVSEEVKTSVKEAVETLKSLGAEVDE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG+EVK Sbjct: 297 VSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGEEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI +GT+ LSS YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF +G+E Sbjct: 357 RRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFES-YDVVVGPTAPTTAFNIGEEI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M ND+ T VN+AGLP ISVP + P+GLQLIG+PF E+TL+ V Sbjct: 416 DDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQLIGKPFDEKTLYRVAYQF 472 Query: 481 EKE 483 E + Sbjct: 473 ETQ 475 >gi|30250012|ref|NP_842082.1| amidase:glutamyl-tRNA(Gln) amidotransferase A subunit [Nitrosomonas europaea ATCC 19718] gi|39931474|sp|Q820J1|GATA_NITEU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|30139119|emb|CAD85983.1| Amidase:Glutamyl-tRNA(Gln) amidotransferase A subunit [Nitrosomonas europaea ATCC 19718] Length = 486 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/461 (45%), Positives = 297/461 (64%), Gaps = 9/461 (1%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K IS+ EL ++ I+ N +NA+I + +K+ A +DK I G + L GIPI Sbjct: 16 KKISSTELTSEFLSRIKALNPDLNAFITIDEEKSLDQANVADKMIAAGRSTPLTGIPIAQ 75 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F +G T S +L F Y++TV ++ G V LGK NMDEFAMGSSNETSYY Sbjct: 76 KDIFCARGWLTTCGSKMLSNFVSPYDATVVERFDQAGMVNLGKTNMDEFAMGSSNETSYY 135 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GPV +PW + PGGSSGGS+ AVA L A+ G+DTGGSIRQPA+ G GIKP Sbjct: 136 GPVKNPWDRLA-----VPGGSSGGSACAVAARLAPAATGSDTGGSIRQPAALCGISGIKP 190 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+I+FA SLDQ G + ++ D A+LL + G+DE D+T + +Y + L+ Sbjct: 191 TYGLVSRYGMIAFASSLDQGGPMAKSAEDLALLLNTMVGFDERDSTSLQRAEENYTQDLE 250 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + G+ +G+PKE+ + +S + + ++ + GA VE+SLP+++ A+P YY+++ Sbjct: 251 KPVNGLRIGLPKEFFAEGMSSDVSNVIEAALAEYRKLGATFVEVSLPNSKLAVPVYYVLA 310 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 PAEASSNL+R+DGVRYG R LE +Y TR+ GFG+EVK RI+IGTYVLS YD+ Sbjct: 311 PAEASSNLSRFDGVRYGYRTAQYSSLEDLYTKTRAEGFGEEVKRRILIGTYVLSHGYYDA 370 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +YL+A+K+R LI DF +AFEQ D+I+ PTTPT AF +G++ ++ M +D++T Sbjct: 371 YYLQAQKLRRLIAEDFRKAFEQ-CDLIMGPTTPTVAFNIGEKCDDPIQM--YLSDIYTST 427 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++AGLP +S+PA K P+GL +IG FRE + +V Sbjct: 428 ASLAGLPGMSIPAGFGSKNRPVGLHIIGNYFREAQMLNVAH 468 >gi|308180107|ref|YP_003924235.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045598|gb|ADN98141.1| glutamyl-tRNA amidotransferase, subunit A [Lactobacillus plantarum subsp. plantarum ST-III] Length = 487 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/475 (44%), Positives = 301/475 (63%), Gaps = 13/475 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 L +K ISA EL + + + ++ A++ + ++A A D+ I DA ++ GI Sbjct: 15 LVAKKISATELAKATFANMNQVDPKLGAFLNLNEEQALQQAAALDQDGI--DANNVFAGI 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKG+ T A S +L+ F P Y +TV KL + A+++GK NMDEFAMG S E Sbjct: 73 PMAVKDNIVTKGLTTTAASKMLENFVPVYNATVVDKLLASNALIVGKTNMDEFAMGGSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS + +PW PGGSSGGS+ AVA ++G+DTGGSIRQP+SF G V Sbjct: 133 TSAFHVTRNPWDI-----SRVPGGSSGGSAVAVASGQVPVALGSDTGGSIRQPSSFNGIV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV+D+A L IAG D D T VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPMTRTVKDNAAALNMIAGNDVHDTTSSKQTVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L I+GM +G+PKEY + + P + + QQ + +D GA + E+SLP+++Y + AY Sbjct: 248 AGLTGDIKGMKIGLPKEYMGEGIDPKVREVIQQAVKQFEDLGATVEEVSLPNSRYGVAAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 308 YIIASSEASSNLQRFDGIRYGFRADDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLSAG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A ++RT+I DF + FE D+I+ P PT AF LG E ++ +M NDV Sbjct: 368 YYDAYFHKAGQVRTMIINDFNKVFED-YDLIMGPVAPTPAFKLGDELSDPITM--YMNDV 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +SVPA + +P+GLQLIG+ F E T++ G E+ ++ Sbjct: 425 LTIPVNLAGLPGMSVPAGFAD-GLPVGLQLIGKAFDESTMYRAGYAFEQATQVYK 478 >gi|313123180|ref|YP_004033439.1| glutamyl-tRNA(gln) amidotransferase subunit a [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279743|gb|ADQ60462.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684647|gb|EGD26802.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 480 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/475 (47%), Positives = 305/475 (64%), Gaps = 17/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+S +SA +L I I+ ++ ++NA+I V + AE+ D L G+ Sbjct: 14 KLKSGAVSADQLAKDTIANIKKTDEKINAFITV--DEDAKPAEDLDFN------NKLAGV 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL F P YESTV KL A ++GK NMDEFAMGSS E Sbjct: 66 PIAIKDNIITNGLKTTAASHILYNFEPVYESTVVAKLKAAQATIIGKTNMDEFAMGSSTE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TSY+G +PW + +K PGGSSGGS+AAVA A++G+DTGGSIRQPASF G Sbjct: 126 TSYFGATKNPW----NLNK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+FA SLDQ G++++ V+DSA +L IAG D+ DAT VPDY Sbjct: 181 GIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAGADDRDATVSEKEVPDYT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L + ++G+ V +PKEY D + + K + I L+ GA I E+SLPHT+Y +P Y Sbjct: 241 SFLGKDVKGLRVAVPKEYMSDAVEEGVRKAVEAQIELLRANGAIINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 YII+ +EAS+NL RYDG+RYG R E K++ E++ +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASANLERYDGIRYGYRAEAKNLDEVFLKSRSEGFGDEVKRRIMLGSFALSAGA 360 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD +L+A K+RTLI +DF + FE DVI+ P + +AF L E ++ M + ND+ Sbjct: 361 YDKFFLQAAKVRTLICQDFDKIFEDN-DVIVGPVSTETAFDLNSEISDQIKMYN--NDIL 417 Query: 435 TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ NMAG+PA SVPA L E MP+G Q++ + F E +F V IE+ ++ Sbjct: 418 TISANMAGIPAASVPAGLSETTGMPVGFQIMAKRFDEGHVFQVADFIERNNKFYE 472 >gi|241896423|ref|ZP_04783719.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Weissella paramesenteroides ATCC 33313] gi|241870403|gb|EER74154.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Weissella paramesenteroides ATCC 33313] Length = 485 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/488 (45%), Positives = 318/488 (65%), Gaps = 13/488 (2%) Query: 4 LNFMA--VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +NF+ + + ++L +K+I++V+LV + I ++++ +A++ +++KA A A D+ Sbjct: 1 MNFLHTDIEKLHEQLVNKEITSVDLVKETLANIAQTDAKYDAFLATMSEKALAEAAAIDE 60 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ D L GIP GIKD TK + T A S IL+ F+P Y++TV +L + GAV +GK Sbjct: 61 AGIDPD-NVLSGIPYGIKDNLITKDVPTTAASKILEDFKPIYDATVVSRLREQGAVGVGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGS+ ETSYY + W D T PGGSSGGS+ +VA ++GTDTG Sbjct: 120 LNMDEFAMGSTTETSYYKQTKNAW---DQTK--VPGGSSGGSAVSVAAGQVPFALGTDTG 174 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G+ TR V+D+A +L A+AG+D+ Sbjct: 175 GSIRQPAAFNGIVGMKPTYGRVSRWGVIAFASSLDQVGVFTRRVKDNATVLAAMAGHDDH 234 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + VPD+ LD I G+ + +P EY + +I +T + GI L++ GA + E Sbjct: 235 DQTSSDQAVPDFTAHLDGDISGLKIAVPTEYFGAGVDDSIKETIRAGIDQLRELGATVDE 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 +SLPHT+Y + AYYI++ AEASSNL R+DG+RYG R E K + ++Y TR+ GFG EVK Sbjct: 295 VSLPHTKYGVAAYYILASAEASSNLQRFDGIRYGFRPENVKSLEDLYVQTRTQGFGDEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD+ + +A ++RTL+ DF + F D+I+ PTTP A+ G + Sbjct: 355 RRIMLGTYSLSAGSYDAFFKKAAQVRTLMNDDFQKVFAD-YDLIVAPTTPNVAYDFGANQ 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ NDV T+ VNMAGLP +SVPA + +P+G+QLI ++EET++ V Sbjct: 414 DDPEVT--YMNDVLTIPVNMAGLPGMSVPAGFVD-GLPVGMQLIANRYQEETIYRVAYAF 470 Query: 481 EKEAGYFR 488 E+ F Sbjct: 471 EQATRLFE 478 >gi|327458856|gb|EGF05204.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK1057] gi|328945669|gb|EGG39820.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK1087] Length = 488 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLTDIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEEVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|332363921|gb|EGJ41700.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK355] Length = 488 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|312898545|ref|ZP_07757935.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Megasphaera micronuciformis F0359] gi|310620464|gb|EFQ04034.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Megasphaera micronuciformis F0359] Length = 487 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/476 (47%), Positives = 302/476 (63%), Gaps = 10/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-D 67 + E +L + ISAVEL YI + S S + A++ + A A A + DK+I G D Sbjct: 6 IHELHKKLVNGQISAVELTQRYIDRKDKSESDIQAFLSDSREAALAVAAQVDKKIAAGED 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 DL GIP IKD KG S +L ++ Y++TV +KL D + LGK NMDEF Sbjct: 66 IADLAGIPGAIKDNICIKGQQATCASKMLASYQSPYDATVIEKLKDLDFISLGKTNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW + PGGSSGGS+AAVA ++G+DTGGS+RQP Sbjct: 126 AMGSSTENSAFKITHNPWNK-----DYVPGGSSGGSAAAVAAGEVVWALGSDTGGSVRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G +G+KPTYG SR G+I+F+ SLDQ G T V D AI+L IAGYD+ D+T V Sbjct: 181 AAYCGRIGLKPTYGLVSRYGLIAFSSSLDQIGTFTNDVEDCAIVLNGIAGYDKKDSTSVP 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY +AL ++G+ +GIP+E+ + L K + I K GA IV + +P+ Sbjct: 241 QIQKDYRKALVADVKGLRIGIPEEFFAEGLDADCRKALDEAIETYKKLGAHIVSVKMPNM 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +Y L AYYII+PAEASSNL RYDGV +GLRV GKDI++MY TRS GFG EVK RI++GT Sbjct: 301 KYGLAAYYIIAPAEASSNLGRYDGVGFGLRVPGKDIVDMYIKTRSEGFGPEVKRRILLGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YLRA K+RTL+++D+ +AFE DV+LTPT P +AF +G +N+ + Sbjct: 361 YVLSAGYYDAYYLRAMKVRTLVRQDYDKAFES-CDVLLTPTAPDTAFKIG--QNSEDPLA 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 DV TV VN+AGLPAIS+P + +P+G+QLIG+ EETL E+E Sbjct: 418 MYLGDVCTVTVNLAGLPAISLPCGF-KNGLPVGMQLIGKALDEETLLRAAYTFERE 472 >gi|253997616|ref|YP_003049680.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylotenera mobilis JLW8] gi|253984295|gb|ACT49153.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylotenera mobilis JLW8] Length = 494 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/468 (48%), Positives = 313/468 (66%), Gaps = 13/468 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K+IS+VEL +++ I+ N +NAYI + K A A+ +D RI G+A L GIP Sbjct: 13 LANKEISSVELTQTFLNRIDALNPAINAYIALDQDKTLAQAKAADVRIAAGNATPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F G T S +L+ F Y++ V + GAV LGK NMDEFAMGSSNET Sbjct: 73 IAQKDIFCAVGWKTTCGSKMLENFIAPYDAHVITQFDQAGAVNLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G V +PW PGGSSGGS+AAVA LCAA+ GTDTGGSIRQPAS G G Sbjct: 133 SYFGGVKNPWDF-----SRVPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGFTG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQAG + ++ D A+++ +AG+DE D+T +N DY R Sbjct: 188 LKPTYGVVSRYGMIAFASSLDQAGPMAKSAEDCALMMNVMAGFDERDSTSLNREKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ +QG+ +G+PKE+ + L + K + I+ K GA+IVEISLP+T ++P YY Sbjct: 248 DLNKPLQGLRIGLPKEFFAEGLDAGVGKVIEDAIAEYKKLGAEIVEISLPNTGLSIPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+RYDGVRYG R E D+++MY +R+ GFG EVK RI+IGTYVLS+ Sbjct: 308 VLAPAEASSNLSRYDGVRYGHRASEYTDLMDMYCKSRAEGFGAEVKRRILIGTYVLSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A++IR LI +DF EAF++ DVI+ P P++AF G++ ++ +M D++ Sbjct: 368 YDAYYLKAQQIRRLIAQDFEEAFKK-CDVIMGPAAPSTAFKAGEKVDDPVAM--YLQDIY 424 Query: 435 TVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREETLFSVGQ 478 T++ N+AGLP +SVPA K +P+GLQ+IG F E + +V Sbjct: 425 TISTNLAGLPGMSVPAGFSTSADGKALPVGLQIIGNYFDEARMLNVAH 472 >gi|327398250|ref|YP_004339119.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Hippea maritima DSM 10411] gi|327180879|gb|AEA33060.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Hippea maritima DSM 10411] Length = 472 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 307/476 (64%), Gaps = 21/476 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E D + ++ A ++ +S + I + Q+NAY+ + + EE N Sbjct: 7 LHELIDLVDKGEVQAEDVYESVLDRINQKDKQINAYVTIFDE-----FEE------NPTG 55 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L+ +PI IKD +G T S IL+ F +++T +KL +NGAV +GK N+DEFA Sbjct: 56 GILKNLPIAIKDNMHIEGKRTTCSSKILNNFIAIFDATAVKKLEENGAVFIGKTNLDEFA 115 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS ETSY+G +PW + PGGSSGGS+AAVA A++G+DTGGSIRQPA Sbjct: 116 MGSSTETSYFGTTKNPWDTAR-----IPGGSSGGSAAAVACGEAIAALGSDTGGSIRQPA 170 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR G+++FA SLDQ G ITR V D+AIL+ I+G+DE D+T + Sbjct: 171 SFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRDVEDAAILMNIISGHDEHDSTSAFV 230 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPD+ + L+Q I+GM +G + D + K + I LK+ G +I + LP + Sbjct: 231 DVPDFTQYLNQDIKGMKIGFYDKTLQD-CDSDVQKAMDESIKILKNLGCEIESVDLPSAK 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 YA+ YYII+PAEASSNLARYDGV+YG R E KD+ +MY TRS GFG EVK RIM+GT Sbjct: 290 YAVSDYYIIAPAEASSNLARYDGVKYGFRADEYKDLKDMYLKTRSEGFGDEVKRRIMLGT 349 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLSS YD++YL+A+K+R LIK+DF +AFE+ D I++PTTPT AF +G++ + M Sbjct: 350 YVLSSGYYDAYYLKAQKLRGLIKQDFDKAFEK-FDCIISPTTPTEAFKVGEKADKPLQM- 407 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +D+FT+ N+ +PAIS+P L + +PLGLQ++ FRE+ +F V EKE Sbjct: 408 -YLSDIFTIPANLTAIPAISIPNGLSDNGLPLGLQIMANAFREDVIFKVASAFEKE 462 >gi|327469119|gb|EGF14591.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK330] Length = 488 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 305/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREGAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|126696250|ref|YP_001091136.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. MIT 9301] gi|166217695|sp|A3PCR0|GATA_PROM0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|126543293|gb|ABO17535.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. MIT 9301] Length = 482 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/481 (46%), Positives = 310/481 (64%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-IN 65 M + R + S + S ELV+ I++ + ++N+YI A A AE DK I Sbjct: 1 MNFNSLRKEIFSNNASVKELVNDIFTNIDHKDPEINSYICTTKDNAIAQAENIDKLIQFK 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+PI IKD TKG+ T S +L F YEST + KLW +G + LGK N+D Sbjct: 61 EKLPPLAGMPIAIKDNICTKGVATTCASKMLKNFVAPYESTASSKLWSSGGICLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A+VA CAA+IG+DTGGSIR Sbjct: 121 EFAMGSSTETSLFGVTSNPWDI-----NRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G IT TV D+A +L +I+G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPFDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP+Y L++SI+G+ +GI KE + L+P + ++ G+ + GA+I+E+ Sbjct: 236 LDKPVPNYLTHLNKSIKGLKIGIIKECFEHPGLNPEVKESVLSGVDRFQALGAEIIEVEC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R +G ++++M +R+ GFG EV+ RI Sbjct: 296 PRFNDGIATYYVIAPSEASANLARYDGVKYGYRSNDGSNLIDMTSKSRAEGFGDEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+K+RTLI++DF AF + VDV+LTPT PT+AF G N+ Sbjct: 356 LIGTYALSAGYSDAYYKKAQKVRTLIRKDFDNAFNK-VDVLLTPTCPTTAFLKGDFVNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM +D+ TV N+AGLPAIS+P K +P+G+QLIG E+ + + I E + Sbjct: 415 LSM--YLSDLLTVPANLAGLPAISIPCGFDTKGLPIGMQLIGNVLEEDRILNAANIFEID 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|331702037|ref|YP_004398996.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus buchneri NRRL B-30929] gi|329129380|gb|AEB73933.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus buchneri NRRL B-30929] Length = 487 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 311/482 (64%), Gaps = 11/482 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++S +L +K+ISA +L + I++ ++ +NA+I V + A A + D + I+ D Sbjct: 7 SLSSIHKQLVNKEISAKDLTQKTLDNIKSFDNDINAFITVNDEGALKKAADVDAKGIDAD 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI IKD TKG+ T A S IL+ F+P Y++T KL G + +GK NMDEF Sbjct: 67 NL-LSGMPIAIKDNMVTKGLTTTAASKILENFKPIYDATAVDKLNKLGTITVGKTNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S + +PW D+T PGGSSGGS+AAVA A++G+DTGGSIRQP Sbjct: 126 AMGGSTENSAFKITHNPW---DTTK--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYGR SR G+I+F SLDQ G ITR V D+A ++ AIAG+DE D T Sbjct: 181 ASFNGVVGMKPTYGRVSRWGLIAFGSSLDQIGPITRNVSDNATIMNAIAGHDEHDLTSST 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPD+ L++ ++GM +GIP E+ L I +T K GA + E+SLPHT Sbjct: 241 KEVPDFTSTLNKGVKGMKIGIPTEFMAQGLDDDIKQTVLDTAETFKKLGATVEEVSLPHT 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +Y + AYYIIS +EASSNL R+DG+RYG R + KD+ ++Y +RS GFG EVK RIM+G Sbjct: 301 KYGVAAYYIISSSEASSNLQRFDGIRYGRRAKDVKDLEDLYVKSRSEGFGDEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD+++ +A ++RTL+ DFT F+ D+IL PT PT A+ +G E+ S M Sbjct: 361 TFSLSAGFYDAYFKKAAQVRTLMINDFTNVFKD-YDLILAPTAPTPAYGIG--EDVSDPM 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 NDV T+ VN+AGLP +S+PA K +P+G+QLIG+P+ E T++ G E+E + Sbjct: 418 TMYMNDVLTLPVNLAGLPGMSIPAGFS-KGLPVGVQLIGRPYDELTVYQAGSAFEQETDF 476 Query: 487 FR 488 + Sbjct: 477 AK 478 >gi|319939803|ref|ZP_08014159.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus anginosus 1_2_62CV] gi|319811016|gb|EFW07331.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus anginosus 1_2_62CV] Length = 488 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 312/486 (64%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + E D L K++SAVEL + ++ +++ S ++++I + ++A A A D + Sbjct: 3 LNQKTIEELHDLLVKKELSAVELTKATLEDMKSRESAVDSFITISEEEAVAQAAAVDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFDATSVEKLYSKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W D+T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAW---DATK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G +RTV+++A LL IAG D+ D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSRTVKENAQLLGVIAGNDKKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V D+ + Q I+G+ + +PKEY + + + + L+ GA + E+S Sbjct: 237 TSSQRTVSDFTSKIGQEIKGLKIALPKEYMGEGIDEKVKERILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEEIENLEDVYVKSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + ++ Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGTQSHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F EET++ V E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|332703261|ref|ZP_08423349.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfovibrio africanus str. Walvis Bay] gi|332553410|gb|EGJ50454.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfovibrio africanus str. Walvis Bay] Length = 493 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/486 (45%), Positives = 318/486 (65%), Gaps = 13/486 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + + R L ++ ++A E V + + IE + ++ A + V A+ A A AE D Sbjct: 5 MTELTRKTLVDIRGLLAARQVAAREAVQACLARIEATEPKVQALLHVDAEGALATAEAMD 64 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K I ++ L G+P+ +KD TKG+ T S +L+ F P +++T KL D GA++L Sbjct: 65 K-IGPDTSKPLWGVPVIVKDVLTTKGLPTTCGSRMLENFVPPFDATAVAKLKDAGAIILA 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y P +PW PGGSSGGS A VA A++GTDT Sbjct: 124 KANMDEFAMGSSTENSAYHPTRNPWDL-----GRVPGGSSGGSGACVAAGQAFAALGTDT 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P+SF G VGIKPTYGR SR G++++ SLDQ G +TR V D+A +L+AI+G+D Sbjct: 179 GGSIRLPSSFCGGVGIKPTYGRVSRYGLVAYGSSLDQIGPMTRNVADAATVLQAISGHDP 238 Query: 241 CDATCVNLPVPDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++LPVPDY A+D + ++G+ +G+PKEY L ++ +Q + K GA+ Sbjct: 239 RDSTSMDLPVPDYLAAVDSADGLKGLRIGMPKEYWGQGLDQEVETLCKQAMDTAKSLGAE 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +V +SLPHT+YA+ YYII+ AEASSNLAR+DGVRYG R + +L+MY+ +R+ GFG Sbjct: 299 LVPVSLPHTEYAIATYYIIAMAEASSNLARFDGVRYGFRDKQATSLLDMYKQSRTKGFGD 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+ GTYVLSS YD++Y +A ++R LI++DF +A+ Q DVI P PT AFPLG Sbjct: 359 EVQRRIITGTYVLSSGYYDAYYRKAAQVRRLIRQDFEQAYSQ-CDVICGPACPTVAFPLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSV 476 + + M D+FT+++N+AGLP +S+P L + MP+GLQ++G + EE + SV Sbjct: 418 DKTADPLQM--YLMDIFTISLNLAGLPGLSLPVGLGKDSGMPVGLQILGPAWGEEKILSV 475 Query: 477 GQIIEK 482 + +EK Sbjct: 476 ARSLEK 481 >gi|323353265|ref|ZP_08087798.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis VMC66] gi|322121211|gb|EFX92974.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis VMC66] Length = 488 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 305/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P + +T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFNATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|194476713|ref|YP_002048892.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Paulinella chromatophora] gi|171191720|gb|ACB42682.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Paulinella chromatophora] Length = 490 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/481 (45%), Positives = 316/481 (65%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E R+++ +ISA EL D ++ I+ + +++A++E+ A++AR+ A D+ G Sbjct: 1 MGIAEWREQMERGEISARELTDQHLARIQEVDPKIHAFLEITAERARSDANRIDELRATG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD TK I T S +L+ F P YESTVTQ+LW GA+++GK N+D Sbjct: 61 ETLPPLAGIPIAIKDNICTKDIRTTCSSRMLETFVPPYESTVTQRLWQAGAILIGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW + PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGASANPWDL-----QRVPGGSSGGSAAAVASGECVASLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G T +V D+A LL+ IAG D DATC Sbjct: 176 QPASFCGLVGLKPTYGRVSRWGLVAFASSLDQIGSFTTSVDDAAELLQVIAGEDYQDATC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + +PVP+Y+ + + ++G+ VG+ KE + + + + L+ G ++ ++S Sbjct: 236 LRVPVPNYKSMIRKPLEGLRVGLIKECFNQKGIDYQVAAAVDIAAAKLESLGCELEQVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH + YY+I+P+EAS+NLARYDGV+YG RVEG + ++EM +R+ GFG EV+ RI Sbjct: 296 PHFNEGIATYYVIAPSEASANLARYDGVKYGYRVEGAETLMEMISRSRAEGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ +++Y +A+++RTLI+RDF AF + VDV+LTPT P++AF +G N+ Sbjct: 356 LIGTYALSAGYVEAYYKKAQQVRTLIRRDFDAAFSK-VDVLLTPTAPSTAFEVGAHTNDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ D+ T+ N+AGLPAISVP +P+GLQLIG E + + E Sbjct: 415 LTL--YLADLLTIPANLAGLPAISVPCGFDNSGLPIGLQLIGNVLDEGRILQIAHHYESS 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|251809896|ref|ZP_04824369.1| possible amidase [Staphylococcus epidermidis BCM-HMP0060] gi|282874550|ref|ZP_06283435.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus epidermidis SK135] gi|293367786|ref|ZP_06614435.1| glutamyl-tRNA(Gln) amidotransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|251806561|gb|EES59218.1| possible amidase [Staphylococcus epidermidis BCM-HMP0060] gi|281296689|gb|EFA89198.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus epidermidis SK135] gi|291318125|gb|EFE58522.1| glutamyl-tRNA(Gln) amidotransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|329734751|gb|EGG71057.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus epidermidis VCU045] gi|329734819|gb|EGG71124.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus epidermidis VCU028] Length = 485 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 324/483 (67%), Gaps = 13/483 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + + +++K+I ++V AIE ++ + +++ + + A AEE D+ + Sbjct: 3 IRFETIEKLTELIKNKEIKPSDVVKDIYAAIEETDPTIKSFLALDKENAIKKAEELDE-L 61 Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 D D L GIP+GIKD TK + T S +L+GF P YESTV KL D AV++GK Sbjct: 62 QAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHDENAVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTG Sbjct: 122 LNMDEFAMGGSTETSYFKKTLNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS+ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AI+G D Sbjct: 177 GSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDAN 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ + + I+G+ + +PKEY + +S + + ++ + LK GA++ E Sbjct: 237 DSTSAPVDDVDFTSDIGKDIKGLKIALPKEYLGEGVSEEVKTSVKEAVETLKSLGAEVDE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG+EVK Sbjct: 297 VSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGEEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI +GT+ LSS YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF +G+E Sbjct: 357 RRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFES-YDVVVGPTAPTTAFNIGEEI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M ND+ T VN+AGLP ISVP + P+GLQLIG+PF E+TL+ V Sbjct: 416 DDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQLIGKPFDEKTLYRVAYQF 472 Query: 481 EKE 483 E + Sbjct: 473 ETQ 475 >gi|82701456|ref|YP_411022.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosospira multiformis ATCC 25196] gi|82409521|gb|ABB73630.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nitrosospira multiformis ATCC 25196] Length = 497 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/472 (44%), Positives = 306/472 (64%), Gaps = 9/472 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L ++ IS+VEL +++ N + NA+I + + + A A+ +D I +G + L G+P Sbjct: 27 LAARKISSVELTSEFLKRSRALNPEYNAFITLDERTSLAQAQAADILIGSGRGQPLTGVP 86 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F TKG T S +L F Y++ V + GAV +GK NMDEFAMGSSNET Sbjct: 87 IAQKDIFCTKGWLTTCGSKMLSNFISPYDAHVIGRFNAVGAVNIGKTNMDEFAMGSSNET 146 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW + PGGSSGGS+ AVA + A+ GTDTGGSIRQPA+ G G Sbjct: 147 SFYGPVKNPWDTAA-----VPGGSSGGSACAVAARMAPAATGTDTGGSIRQPAALCGISG 201 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQ G + ++ D ++L +AG+D D+T + DY R Sbjct: 202 LKPTYGLVSRYGMIAFASSLDQGGPMAKSAEDLGLMLNVMAGFDARDSTSLEREPEDYTR 261 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ + G+ +G+PKEY + ++ + + + I + GA+ VE+SLP+T+ ++P YY Sbjct: 262 DLEKPLDGLRIGLPKEYFVKEIAEDVARAVEAAIGQYRKLGAETVEVSLPNTKLSVPVYY 321 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+R+DGVRYG R + D+ +MY TR+ GFG EVK RI+IGTYVLS Sbjct: 322 VLAPAEASSNLSRFDGVRYGYRAPDYLDLNDMYRKTRAQGFGSEVKRRILIGTYVLSHGY 381 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y++A+K+R L+ +DF EAF++ D+I+ PT+PT AF LG E +S + +D + Sbjct: 382 YDAYYIQAQKLRRLMAQDFAEAFKE-CDIIMGPTSPTVAFDLG--ERSSDPVQMYLSDAY 438 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 T+AVN+AGLPA+S+P K P+GL +IG F E + +V + E+ + Sbjct: 439 TIAVNLAGLPAMSIPVGFGHKNRPVGLHIIGNYFAEAQMLNVAHQYQLESDW 490 >gi|206900742|ref|YP_002250888.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dictyoglomus thermophilum H-6-12] gi|206739845|gb|ACI18903.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dictyoglomus thermophilum H-6-12] Length = 483 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/467 (45%), Positives = 295/467 (63%), Gaps = 13/467 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +K+ + E+V+SY++ I+ +NA++ + + +E + + N Sbjct: 4 LREIKKIYENKEANVKEVVESYLEKIKEWEPYINAFLHIPYEDIEKQVKELESKSPN--- 60 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI IKD TK I T S IL+ F P Y++TV ++L +NGA+++GK N+DEFA Sbjct: 61 LPLYGIPIAIKDNILTKNIKTTCASKILENFIPPYDATVVKRLKENGAIIIGKTNLDEFA 120 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S +GP +PW + PGGSSGGS+A V+ S+G+DTGGSIR PA Sbjct: 121 MGSSCENSAFGPTKNPWDI-----ERVPGGSSGGSAACVSAGEVPVSLGSDTGGSIRLPA 175 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SFTG +G+KPTYG SR G+++FA SLDQ G RTV D AI L+ IAG+D D+T Sbjct: 176 SFTGVIGLKPTYGLVSRFGLVAFASSLDQIGPFGRTVEDIAITLQIIAGHDPMDSTSSPY 235 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +P+Y L +S++ VGIPKE +S + KT + K+ G I EISLP + Sbjct: 236 EIPNYLEGLGKSVKNWRVGIPKELWYKGVSEEVLKTLENSFDVFKEMGVTIEEISLPSLE 295 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 YALP YYIIS +EASSNLARYDGV+YG R +DI+ MY+ TR GFG EVK RI++GT Sbjct: 296 YALPVYYIISTSEASSNLARYDGVKYGYRDFTAEDIISMYKQTRGKGFGSEVKRRIILGT 355 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ YD++YL+A K+R LI+ +F EAF++ VD+I +PT+P F LG E S + Sbjct: 356 YALSAGYYDAYYLKATKVRRLIRMEFEEAFKK-VDIIASPTSPVLPFKLG--ERISDPLQ 412 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 D+ T+ VN+AG+PAIS+PA +P+G+Q + F E+ L Sbjct: 413 MYLTDIMTIPVNLAGIPAISMPAGFY-NNLPVGIQFMSSFFTEDKLL 458 >gi|160895801|ref|YP_001561383.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Delftia acidovorans SPH-1] gi|160361385|gb|ABX32998.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Delftia acidovorans SPH-1] Length = 498 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 216/487 (44%), Positives = 305/487 (62%), Gaps = 12/487 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+ + VS LR + + AVE ++ A ++ + A++ + + A A +D Sbjct: 6 TDLHTLGVSALSALLRERKLGAVEAAQHFL-ARAQAHQNLGAFVSIDEEATLAQARAADA 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+PI KD F T+ T A S +L G+R +++TV +L + GAV LGK Sbjct: 65 LIAQGKGGRLAGVPIAHKDIFVTRDFPTTASSKMLAGYRSPFDATVVTRLAEAGAVTLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPV----ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LN DEFAMGS+NE S PV +P R+ +TD+ PGGSSGGS+ AVA L A G Sbjct: 125 LNCDEFAMGSANENSAIAPVGFDAPAPVRNPWNTDR-VPGGSSGGSAVAVAAGLAPAVTG 183 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + ++ D A+LL + G Sbjct: 184 TDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMGKSAEDCALLLSEMCG 243 Query: 238 YD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + D+T +++P D+ L+ I+G+ +GIP E+ + LS + + + G Sbjct: 244 PDLDRDSTSLDVPAEDFTARLNDGIEGLRIGIPAEFFGEGLSADVRAAVDGALKEYEKLG 303 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGF 355 A++V ISLP T+ ++P YYI++PAEASSNL+R+DGV++G R + D+++MY+ TR+ GF Sbjct: 304 ARLVPISLPRTELSIPVYYILAPAEASSNLSRFDGVKFGHRAKNYTDLVDMYKKTRAEGF 363 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIMIG YVLS YD++YL+A+KIR +I DF AF+Q DVI P PT A+ Sbjct: 364 GDEVKRRIMIGAYVLSEGYYDAYYLQAQKIRRMIADDFQAAFQQ-CDVIAGPAAPTVAWQ 422 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG S + + D+FT+ ++AGLP +SVPA E MP+GLQLIG F+E L + Sbjct: 423 LG---GKSDPLANYLADIFTLPASLAGLPGMSVPAGFGEAGMPVGLQLIGNYFKEGQLLN 479 Query: 476 VGQIIEK 482 ++ Sbjct: 480 AAHRFQQ 486 >gi|57867372|ref|YP_189007.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus epidermidis RP62A] gi|71152063|sp|Q5HN34|GATA_STAEQ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|57638030|gb|AAW54818.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus epidermidis RP62A] Length = 485 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 324/483 (67%), Gaps = 13/483 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F ++ + + +++K+I ++V AIE ++ + +++ + + A AEE D+ + Sbjct: 3 IRFESIEKLTELIKNKEIKPSDVVKDIYAAIEETDPTIKSFLALDKENAIKKAEELDE-L 61 Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 D D L GIP+GIKD TK + T S +L+GF P YESTV KL D AV++GK Sbjct: 62 QAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHDENAVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTG Sbjct: 122 LNMDEFAMGGSTETSYFKKTLNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS+ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AI+G D Sbjct: 177 GSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDAN 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ + + I+G+ + +PKEY + +S + + ++ + LK GA++ E Sbjct: 237 DSTSAPVDDVDFTSDIGKDIKGLKIALPKEYLGEGVSEEVKTSVKEAVETLKSLGAEVDE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP+T+Y +P+YY+I+ +EAS NLAR+DG+RYG E + + E+Y+ +RS GFG+EVK Sbjct: 297 VSLPNTKYGIPSYYVIASSEASVNLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGEEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI +GT+ LSS YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF +G+E Sbjct: 357 RRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFES-YDVVVGPTAPTTAFNIGEEI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M ND+ T VN+AGLP ISVP + P+GLQLIG+PF E+TL+ V Sbjct: 416 DDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQLIGKPFDEKTLYRVAYQF 472 Query: 481 EKE 483 E + Sbjct: 473 ETQ 475 >gi|325690283|gb|EGD32287.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK115] Length = 488 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKG+ T A S IL ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGMLTTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|109891961|sp|Q2YC91|GATA_NITMU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 483 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/472 (44%), Positives = 306/472 (64%), Gaps = 9/472 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L ++ IS+VEL +++ N + NA+I + + + A A+ +D I +G + L G+P Sbjct: 13 LAARKISSVELTSEFLKRSRALNPEYNAFITLDERTSLAQAQAADILIGSGRGQPLTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F TKG T S +L F Y++ V + GAV +GK NMDEFAMGSSNET Sbjct: 73 IAQKDIFCTKGWLTTCGSKMLSNFISPYDAHVIGRFNAVGAVNIGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW + PGGSSGGS+ AVA + A+ GTDTGGSIRQPA+ G G Sbjct: 133 SFYGPVKNPWDT-----AAVPGGSSGGSACAVAARMAPAATGTDTGGSIRQPAALCGISG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQ G + ++ D ++L +AG+D D+T + DY R Sbjct: 188 LKPTYGLVSRYGMIAFASSLDQGGPMAKSAEDLGLMLNVMAGFDARDSTSLEREPEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ + G+ +G+PKEY + ++ + + + I + GA+ VE+SLP+T+ ++P YY Sbjct: 248 DLEKPLDGLRIGLPKEYFVKEIAEDVARAVEAAIGQYRKLGAETVEVSLPNTKLSVPVYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++PAEASSNL+R+DGVRYG R + D+ +MY TR+ GFG EVK RI+IGTYVLS Sbjct: 308 VLAPAEASSNLSRFDGVRYGYRAPDYLDLNDMYRKTRAQGFGSEVKRRILIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y++A+K+R L+ +DF EAF++ D+I+ PT+PT AF LG E +S + +D + Sbjct: 368 YDAYYIQAQKLRRLMAQDFAEAFKE-CDIIMGPTSPTVAFDLG--ERSSDPVQMYLSDAY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 T+AVN+AGLPA+S+P K P+GL +IG F E + +V + E+ + Sbjct: 425 TIAVNLAGLPAMSIPVGFGHKNRPVGLHIIGNYFAEAQMLNVAHQYQLESDW 476 >gi|320547445|ref|ZP_08041732.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus equinus ATCC 9812] gi|320447922|gb|EFW88678.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus equinus ATCC 9812] Length = 488 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 305/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E + L +K+ISAVEL + ++ I+ ++++I V + A A A D++ Sbjct: 3 FNTKSIDELHNLLVNKEISAVELTKATLEDIKEREVAVDSFITVSEEAALAQAAAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T+GI T A S +L + P +++T +KL+ V++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMVVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYGR SR G+I+F SLDQ G +TV+++A LL IAG+D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFAQTVKENAQLLNVIAGHDAKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + + GA + E+S Sbjct: 237 TSSDREVSDFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILKAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYSNLEDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI RDF + F D+IL PT P+ AF L ++ Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFAD-YDLILGPTAPSVAFGLDTLNHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D+ T+ VN+AGLP IS+PA + +P+G+QLIG + EET++ E Sbjct: 416 PVSM--YLADILTIPVNLAGLPGISIPAGFAQ-GLPVGMQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|15605793|ref|NP_213170.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Aquifex aeolicus VF5] gi|6225408|sp|O66610|GATA_AQUAE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254574883|pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574886|pdb|3H0L|D Chain D, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574889|pdb|3H0L|G Chain G, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574892|pdb|3H0L|J Chain J, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574895|pdb|3H0L|M Chain M, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574898|pdb|3H0L|P Chain P, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574901|pdb|3H0L|S Chain S, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574904|pdb|3H0L|V Chain V, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574907|pdb|3H0M|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574910|pdb|3H0M|D Chain D, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574913|pdb|3H0M|G Chain G, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574916|pdb|3H0M|J Chain J, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574919|pdb|3H0M|M Chain M, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574922|pdb|3H0M|P Chain P, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574925|pdb|3H0M|S Chain S, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574928|pdb|3H0M|V Chain V, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574931|pdb|3H0R|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574934|pdb|3H0R|D Chain D, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574937|pdb|3H0R|G Chain G, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574940|pdb|3H0R|J Chain J, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574943|pdb|3H0R|M Chain M, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574946|pdb|3H0R|P Chain P, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574949|pdb|3H0R|S Chain S, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|254574952|pdb|3H0R|V Chain V, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus gi|2982954|gb|AAC06569.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Aquifex aeolicus VF5] Length = 478 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/481 (45%), Positives = 313/481 (65%), Gaps = 15/481 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++SE R+ L+ ++S E+V+S+ + ++ AYI + KA AE +R + Sbjct: 6 SLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKEREL--- 62 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI +KD +G T S IL+ F Y++TV ++L GA+++GK N+DEF Sbjct: 63 --PLFGIPIAVKDNILVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEF 120 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + P +PW + PGGSSGGS+A+VA S+G+DTGGSIRQP Sbjct: 121 AMGSSTEYSAFFPTKNPWDL-----ERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIRQP 175 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G +GIKPTYGR SR G+++FA SLDQ G+ R D A++L+ I+G+DE D+T Sbjct: 176 ASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDSTSAK 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +PVP++ + + ++G+ +G+PKE+ L P + + ++ I L+ G +I E+SLPH Sbjct: 236 VPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEKEGFEIKEVSLPHV 295 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y++P YYII+P+EASSNLARYDGVRYG R E KDI EMY TR GFG EVK RIM+G Sbjct: 296 KYSIPTYYIIAPSEASSNLARYDGVRYGYRAKEYKDIFEMYARTRDEGFGPEVKRRIMLG 355 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD++YL+A+K+R LI DF +AFE+ VDVI +PTTPT F G+ N M Sbjct: 356 TFALSAGYYDAYYLKAQKVRRLITNDFLKAFEE-VDVIASPTTPTLPFKFGERLENPIEM 414 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ TV N+AGLPAIS+P A + +P+G QLIG+ + E TL + + E++ + Sbjct: 415 --YLSDILTVPANLAGLPAISIPIA-WKDGLPVGGQLIGKHWDETTLLQISYLWEQKFKH 471 Query: 487 F 487 + Sbjct: 472 Y 472 >gi|209524885|ref|ZP_03273431.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Arthrospira maxima CS-328] gi|209494764|gb|EDZ95073.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Arthrospira maxima CS-328] Length = 488 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/480 (47%), Positives = 313/480 (65%), Gaps = 13/480 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E +L +K+ SAVE+ + I + +++ + A +A A + D +I GD Sbjct: 3 SICELHQQLVNKERSAVEITTEALDRINKLEPTLKSFLCITADRALEQARQVDAKIAAGD 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPI +KD T+GI T S IL F P YESTVT KL + GAV+LGK N+DE Sbjct: 63 EIGLLAGIPIAVKDNMCTEGITTTCGSKILANFVPPYESTVTTKLIEAGAVILGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAFQITANPW---DITR--VPGGSSGGSAAAVAANQAVVALGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G++++A SLDQ G RTV D+AILL AIAGYD D+T + Sbjct: 178 PASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFGRTVEDAAILLNAIAGYDPKDSTSL 237 Query: 247 NLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N+ +P+Y L S++ + +G+ KE + L P +++ + I L+ GA+I IS Sbjct: 238 NVEIPNYSDFLKPSLKPRSKIKIGVIKETFGEGLDPVVEQAVTKAIDVLQSLGAEIQVIS 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHR 362 P +Y LP YYII+P+EAS+NLARYDGV+YG R D ++EMY TR+ GFG EVK R Sbjct: 298 CPRFRYGLPTYYIIAPSEASANLARYDGVKYGFRTPDADNLIEMYAKTRAEGFGAEVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++YL+A+K+RTLIK+DF AF Q V+V++ PT+PT+AF G++ ++ Sbjct: 358 IMVGTYTLSAGYYDAYYLKAQKVRTLIKQDFDRAFTQ-VEVLVCPTSPTTAFKAGEKTSD 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ T+ VN+AGLPAISVP + +P+G+QLIG+ E LF V E+ Sbjct: 417 PLSM--YLSDLMTIPVNLAGLPAISVPCGFDSQGLPIGMQLIGKVLGESRLFEVAHAYEQ 474 >gi|116074619|ref|ZP_01471880.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. RS9916] gi|116067841|gb|EAU73594.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. RS9916] Length = 487 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/481 (47%), Positives = 310/481 (64%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 MA++E R +L S +SA EL D ++ I+ ++AY+EV A +ARA A+ D G Sbjct: 1 MAIAEWRQQLESGQVSARELTDHHLARIDAVEPTLHAYLEVTADRARADADRIDAARSAG 60 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+ IKD TKG+ T S +L+GF P YESTVT KLWD GAV+LGK N+D Sbjct: 61 EDLPPLAGVPLAIKDNLCTKGVTTTCASRMLEGFVPPYESTVTSKLWDAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +GP +PW PGGSSGGS+AA+A C AS+G+DTGGSIR Sbjct: 121 EFAMGGSTETSAFGPTANPWNV-----DHVPGGSSGGSAAALAAGECMASLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G T V D+A LL+ +AG+D D+T Sbjct: 176 QPASFCGVVGLKPTYGRISRYGLVAFASSLDQVGPFTSNVADAAALLQVMAGHDPRDSTS 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVPDY AL + I G+ VG+ +E + + L + + L+ GA++V++S Sbjct: 236 LKAPVPDYSAALGKPITGLKVGLVRECFEQEGLDAEVKASVMAAAQQLQALGAELVDVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R + + L M ++R+ GFG EV+ RI Sbjct: 296 PRFTDGIATYYVIAPSEASANLARYDGVKYGFRADDAESLAAMTASSRAQGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF A+ Q VDV+LTPT PT++F G ++ Sbjct: 356 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAY-QTVDVLLTPTAPTTSFRNGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ N+AGLPAISVP +P+G+QLIG E L V E+ Sbjct: 415 LAM--YLADLLTIPANLAGLPAISVPCGFNSAGLPIGVQLIGNVLDEARLLQVAHQYEQS 472 Query: 484 A 484 A Sbjct: 473 A 473 >gi|227498768|ref|ZP_03928910.1| glutamyl-tRNA(Gln) amidotransferase [Acidaminococcus sp. D21] gi|226904222|gb|EEH90140.1| glutamyl-tRNA(Gln) amidotransferase [Acidaminococcus sp. D21] Length = 488 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/482 (46%), Positives = 309/482 (64%), Gaps = 12/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V + ++L K+IS+VEL + I+ + AYI + + A A E D++I G+A Sbjct: 8 VHDLHEKLTKKEISSVELTEKVFDRIDKVEDSVKAYITLDKEGALKKAREVDQKIAAGEA 67 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L GIP IKD + KG+ S IL+ F+P Y++ V + L + V +GK NMDEF Sbjct: 68 IKPLTGIPGAIKDNISLKGMRLTCASKILENFQPVYDAHVIENLRKDDTVFIGKTNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGS+ ETSY+ +PW D T PGGSSGGS+AA+A S+G+DTGGSIRQP Sbjct: 128 AMGSTTETSYFKATSNPW---DLTR--VPGGSSGGSAAAIAAGEAIWSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VGIKPTYGR SR G I+FA SLDQ G IT+ V D+AI+L I G D D+T N Sbjct: 183 ASFNGCVGIKPTYGRVSRYGCIAFASSLDQIGPITKDVTDAAIVLNTICGVDAHDSTSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +PVPD+ +AL Q ++ M +G+PKE+ P + + + ++ GAK+VE+SLPHT Sbjct: 243 VPVPDFTKALKQDVKDMVIGLPKEFFGKGTDPKVAEQIKLTAKKYEELGAKVVEVSLPHT 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +YA+ YYII+PAEAS+NL R+DGVRYG R + K EM TR+ GFG+EV+ RIM+G Sbjct: 303 EYAVITYYIIAPAEASANLGRFDGVRYGFRDLSAKSAPEMMAATRTEGFGEEVRRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TYVLSS YD++Y +A ++RTLI++D+ +AFE D++LTPT+P A+ L + + + Sbjct: 363 TYVLSSGYYDAYYNKAMQVRTLIRQDYQKAFET-CDLLLTPTSPVVAYSLDAKMD---PL 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 DV T+ VNMAGLP +S+P + MP+G QLIG+P EETL E+ + Sbjct: 419 TVYMLDVTTIPVNMAGLPGMSIPCGFVD-GMPVGAQLIGKPLGEETLLRAAYTFEQATEF 477 Query: 487 FR 488 + Sbjct: 478 HK 479 >gi|114331581|ref|YP_747803.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosomonas eutropha C91] gi|122313633|sp|Q0AFP4|GATA_NITEC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|114308595|gb|ABI59838.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nitrosomonas eutropha C91] Length = 486 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/461 (45%), Positives = 296/461 (64%), Gaps = 9/461 (1%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K IS+ EL ++ I+ N +NA+I + +K+ A +D+ I G + L GIPI Sbjct: 16 KKISSTELTGEFLARIKALNPDLNAFITMDEEKSLDQARTADEMIATGQSTLLTGIPIAQ 75 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F G T S +L F Y++TV ++ G V LGK NMDEFAMGSSNETSYY Sbjct: 76 KDIFCANGWLTTCGSKMLSNFISPYDATVVKQFDQVGMVNLGKTNMDEFAMGSSNETSYY 135 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GPV +PW + PGGSSGGS+ AVA L A+ GTDTGGSIRQPA+ G GIKP Sbjct: 136 GPVKNPWDRLA-----VPGGSSGGSACAVAARLAPAATGTDTGGSIRQPAALCGISGIKP 190 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+I+FA SLDQAG + R+ D A+LL + G+DE D+T + DY + L+ Sbjct: 191 TYGLVSRYGMIAFASSLDQAGPMARSAEDLALLLNVMVGFDERDSTSLQREKEDYTQDLE 250 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + G+ +G+PKE+ + +S + + ++ + GA VE+SLP+++ A+P YY+++ Sbjct: 251 KPVSGLRIGLPKEFFAEGMSSDVSSAVEAALAEYRKLGATFVEVSLPNSKLAVPVYYVLA 310 Query: 319 PAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 PAEASSNL+R+DGVRYG R + ++ ++Y TR+ GFG EVK RI+IGTYVLS YD+ Sbjct: 311 PAEASSNLSRFDGVRYGHRAAQYANLEDLYAKTRAEGFGDEVKRRILIGTYVLSHGYYDA 370 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +YL+A+K+R LI DF +AFEQ D+I+ PT+PT AF +G+ N+ M +D++T A Sbjct: 371 YYLQAQKLRRLIAEDFKKAFEQ-CDLIMGPTSPTVAFNIGERCNDPIQM--YLSDIYTSA 427 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++AGLP +S+P K P+GL +IG FRE + + Sbjct: 428 ASLAGLPGMSIPVGFGSKNRPVGLHIIGNYFREAQMLNAAH 468 >gi|152974139|ref|YP_001373656.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189045141|sp|A7GKK3|GATA_BACCN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|152022891|gb|ABS20661.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus cytotoxicus NVH 391-98] Length = 485 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/480 (46%), Positives = 317/480 (66%), Gaps = 9/480 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLNEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD TKG+ T S +L F P Y++TV QKL + + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTKGLRTTCASKMLANFDPIYDATVVQKLNEADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++ PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPWNL-----EYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGVDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + V +Y L ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 242 IEVGNYLAGLTGDVKGLRIAVPKEYLGEGVGEEARESVLAALKVLEGMGATWEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY+IS +EASSNL+R+DGVRYG+R + +++++Y+NTRS GFG EVK RIM+G Sbjct: 302 KYALATYYLISSSEASSNLSRFDGVRYGVRSDNVNNLMDLYKNTRSEGFGDEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ +M Sbjct: 362 TFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKIDDPMTM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Y Sbjct: 421 --YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQATDY 478 >gi|166030612|ref|ZP_02233441.1| hypothetical protein DORFOR_00278 [Dorea formicigenerans ATCC 27755] gi|166029614|gb|EDR48371.1| hypothetical protein DORFOR_00278 [Dorea formicigenerans ATCC 27755] Length = 488 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 218/492 (44%), Positives = 303/492 (61%), Gaps = 12/492 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ AV E ++++K+IS E +Y+ IE + +++Y+ + + A AEE Sbjct: 1 MDIMSLTAV-ELGKKIKAKEISVTEATQAYLDQIEKVENDVHSYVTIDKEGALKRAEEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I +G L G+P+ IKD TKG T S IL+ F P + S L GAV++ Sbjct: 60 KMIDDGTLLSPLAGVPVAIKDNMCTKGTRTTCSSKILENFVPTFTSEAVLNLEKAGAVII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETSYYG +PW PGGSSGGS AAVA CA ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSYYGVTRNPWNL-----GHVPGGSSGGSCAAVAAGECAYALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G I + V D A +L+ IA +D Sbjct: 175 TGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILETIASHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V D+ AL ++GM +GIP++Y D LS + + + L++ GA + Sbjct: 235 VKDSTSVEREY-DFTSALTDDVKGMKIGIPRDYFGDGLSADVKEQILNAVKILEEKGAVV 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E L +YA+PAYYII+ AEASSNLAR+DGV+YG R E + L MY+ TRS GFG E Sbjct: 294 EEFDLSLVKYAIPAYYIIADAEASSNLARFDGVKYGYRTEEYEGLHNMYKKTRSEGFGAE 353 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK+ F +AF + D+I+ P PT+A LGK Sbjct: 354 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDKAFAK-YDMIVAPAAPTTAPELGK 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + S M +D++T++VN+AGLP IS+P K +P+G+QLIG F+E+ + Sbjct: 413 --SLSDPMKMYLSDIYTISVNLAGLPGISIPVGKDSKGLPVGMQLIGDCFQEKKIIQAAY 470 Query: 479 IIEKEAGYFRPH 490 E+ Y P Sbjct: 471 TFEQTRTYEAPQ 482 >gi|78184875|ref|YP_377310.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. CC9902] gi|109891995|sp|Q3AVK4|GATA_SYNS9 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78169169|gb|ABB26266.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Synechococcus sp. CC9902] Length = 491 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/481 (46%), Positives = 319/481 (66%), Gaps = 11/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +S R +L++ DIS+ ELVD +I+ +E + ++ Y E+ ++ARA A+ D G Sbjct: 6 MTISAWRQQLQNGDISSRELVDQHIERLETAEPSLSVYNEITVERARADADRIDAARAAG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++ L G+P+ IKD T+G+ T S +L+ F P YEST T++LW G V++GK N+D Sbjct: 66 ESLGPLAGLPLAIKDNLCTRGVRTTCSSRMLEHFVPPYESTATERLWQAGGVLVGKTNLD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +G +PW ++D PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 126 EFAMGGSTETSAFGATHNPW-NLD----HVPGGSSGGSAAAVASGSCIASLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G +V D+A LL+ IAG D D+TC Sbjct: 181 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFATSVADAAELLQVIAGPDPRDSTC 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N+ VPDY L+QSI+G+ VG+ KE + L ++ + + + L+ GA++VE+S Sbjct: 241 LNVEVPDYSAGLNQSIKGLKVGVIKECFDAKGLDGEVNASVRAAAAQLEALGAELVEVSC 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R + + + M ++R+ GFG+EV+ RI Sbjct: 301 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAADAESLATMTSSSRAEGFGEEVQRRI 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF Q VDV+LTPT P+ AF G +++ Sbjct: 361 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAF-QSVDVLLTPTAPSPAFKAGAHKDDP 419 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ VN+AGLPAISVP + +P+G+QLIG E L V E+ Sbjct: 420 LAM--YLADLLTIPVNLAGLPAISVPCGFSQTGLPIGVQLIGNVLDEARLLQVAHQYEQA 477 Query: 484 A 484 A Sbjct: 478 A 478 >gi|322433929|ref|YP_004216141.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium sp. MP5ACTX9] gi|321161656|gb|ADW67361.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium sp. MP5ACTX9] Length = 477 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/445 (49%), Positives = 297/445 (66%), Gaps = 10/445 (2%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGF 99 +N+++ + +A A A D G+ L G+PIGIKD A +G A S IL+G+ Sbjct: 38 INSFLSLSRDRAMAQAAHIDALAAKGEPLPPLAGMPIGIKDVLAMQGAPATAGSKILEGY 97 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 RP Y++TV QKL GAV+LGKLN DEFAMGSSNE S YGPV +P R++D PGGS Sbjct: 98 RPPYDATVVQKLEAAGAVLLGKLNCDEFAMGSSNENSAYGPVKNP-RALD----HVPGGS 152 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS+AAVA C AS+GTDTGGSIRQPA+F G VGI PTYGR SR G+I+FA SLD+ G Sbjct: 153 SGGSAAAVAAGFCVASLGTDTGGSIRQPAAFCGVVGILPTYGRVSRFGLIAFASSLDRVG 212 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + V D+A +L IAG+D DAT PV DY AL Q I G+ VG+P EY + L Sbjct: 213 PLAANVTDAATVLGIIAGHDPLDATSSVRPVDDYAAALTQPIAGLRVGVPDEYFGEGLDT 272 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-V 338 I ++ + LK G +IV+I+LPHT+YA+P YY+I+ AEASSNL+R+DGVR+GLR Sbjct: 273 EIRAAVERTLEGLKRQGCEIVKITLPHTKYAVPTYYVIATAEASSNLSRFDGVRFGLRSA 332 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 E K + MY TR GFG EVK RI++GTY LS+ YD++Y +A+++RTL+ RDF AFE Sbjct: 333 ESKTLSNMYRKTREEGFGPEVKRRILLGTYALSAGYYDAYYKKAQQVRTLLARDFLTAFE 392 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 DVI+ P TPT F LG++ ++ SM D++TVA ++AG+ +SVP +P Sbjct: 393 S-CDVIVGPMTPTPPFKLGEKTDDPVSM--YLADIYTVAASLAGICGMSVPCGETSGGLP 449 Query: 459 LGLQLIGQPFREETLFSVGQIIEKE 483 +G+Q++G+ F E T+ +G +E + Sbjct: 450 IGVQIMGRHFDESTMLRIGLAVENQ 474 >gi|227893044|ref|ZP_04010849.1| possible amidase [Lactobacillus ultunensis DSM 16047] gi|227865157|gb|EEJ72578.1| possible amidase [Lactobacillus ultunensis DSM 16047] Length = 479 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/474 (47%), Positives = 311/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S ++SA +L + I++++ ++NA+I V+ A + K L GI Sbjct: 14 KLASGELSADKLAKDTVANIKDTDKKLNAWITVLDDAKPAENLDYSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TVT KL + GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVTSKLKNAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V IPKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAIPKEY-MEAVSGEMREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGTEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFDIGSEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|309389837|gb|ADO77717.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Halanaerobium praevalens DSM 2228] Length = 480 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/477 (46%), Positives = 311/477 (65%), Gaps = 14/477 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E + +L +I+ E+ DSY++ I Q+ +YI V + A +E + + Sbjct: 6 LTIHELKAKLNKGEITPTEIKDSYLKRINQVEDQVQSYITVTEELANKQLKEYENK---K 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 DA L GIPI +KD +T+G+ T S +L+ + P Y +TV +KL GA+ +GK NMDE Sbjct: 63 DAL-LAGIPIAVKDNMSTEGVKTTCASKMLENYEPPYNATVVEKLNQAGALTMGKTNMDE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+ E S + +PW ++D PGGSSGGS+AAVA CAA++G+DTGGSIRQ Sbjct: 122 FAMGSTTENSAFFVSRNPW-NLD----HAPGGSSGGSAAAVAAGECAAALGSDTGGSIRQ 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+ G VG+KPTYG SR G+++FA SLDQ G IT+ V DSAI++ I+GYD D+T + Sbjct: 177 PASYCGVVGLKPTYGMVSRYGLVAFASSLDQIGPITKDVEDSAIMMNVISGYDPKDSTSI 236 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 DY + L Q + GM +GIP EY + P + + I LK+AGA++ ++ + Sbjct: 237 ADKKEDYTKYLKQDVSGMKIGIPAEYFELKIDPEVKASVLSAIEKLKEAGAEVEKVHMTD 296 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMI 365 YAL AYY+I+PAEASSNLARYDGVRYGLR E DI +M+ NTR GFG EVK RI+I Sbjct: 297 ASYALAAYYVIAPAEASSNLARYDGVRYGLRSEKADDINQMFTNTRLEGFGDEVKRRIVI 356 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++YL+A+K+RTLIK DF F++ D+I+TPT P++A L E++ Sbjct: 357 GTYALSSGYYDAYYLKAQKVRTLIKDDFDRIFKE-FDLIVTPTAPSTALNLESEKD---P 412 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + D+FTV VN+AG+PA+S+P + +MP+GLQLIG F E + +EK Sbjct: 413 LEMYHTDIFTVPVNIAGVPAMSIPCGFNDNQMPIGLQLIGPHFGEGKIIQAAYTLEK 469 >gi|160933303|ref|ZP_02080691.1| hypothetical protein CLOLEP_02148 [Clostridium leptum DSM 753] gi|156867180|gb|EDO60552.1| hypothetical protein CLOLEP_02148 [Clostridium leptum DSM 753] Length = 483 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 215/478 (44%), Positives = 310/478 (64%), Gaps = 10/478 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V+E ++LRS+ +SA E +Y+ +E ++ AY+ V + A A + D++ + G Sbjct: 8 MTVTELSEKLRSRKLSAEEAAKAYLGQMEKREPEVGAYLTVTREAALETARKVDQKRMKG 67 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP GIKD TKG+ T S +L+ F P Y++ V ++L D V+LGKLNMD Sbjct: 68 EELHPLAGIPTGIKDNICTKGVKTTCASRMLENFVPPYDAAVIERLKDCHIVVLGKLNMD 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ E SYY +P R + PGGSSGG++A VA A +IG+DTGGSIR Sbjct: 128 EFAMGSTTENSYYQITKNP-RDLTRV----PGGSSGGAAACVAAQEAACAIGSDTGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G VG+KPTYG SR G+++FA SLDQ G +T+ V D+A+++ AIAG D DAT Sbjct: 183 QPAAFCGVVGMKPTYGAVSRYGLVAFASSLDQIGPLTKNVADNALVMNAIAGKDFRDATS 242 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ D+ L++ ++G+ + +PK+Y + +SP + + + GA + E LP Sbjct: 243 LDRAWGDFAGELNKGVKGLKIALPKQYFGEGISPEVKGAVLEAAKRYEALGAFVEEADLP 302 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +YALPAYY+IS AEASSNLAR+DGV+YG R E +DI ++Y TR+ GFG+EVK RIM Sbjct: 303 ALEYALPAYYVISSAEASSNLARFDGVKYGFRAEDYEDIDQLYLATRTQGFGKEVKRRIM 362 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G++VLS+ YD++Y +A ++RTLI+R+F A E G D+IL P PT+A+ +G E S Sbjct: 363 LGSFVLSAGYYDAYYKKALQVRTLIQREFDRALE-GRDLILAPVAPTTAYRIG--EKTSD 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + DV TV VN+AGLPA+S+P +P+G+QLIG+ +RE L+ G E+ Sbjct: 420 PLQMYSGDVCTVPVNIAGLPALSLPCGEDRDGLPVGMQLIGKAYREALLYRAGYAFEQ 477 >gi|330466194|ref|YP_004403937.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Verrucosispora maris AB-18-032] gi|328809165|gb|AEB43337.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Verrucosispora maris AB-18-032] Length = 491 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/497 (45%), Positives = 312/497 (62%), Gaps = 17/497 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L ++ E + S SAVE+ +++ I + Q+NA++ V ++ A AAA E D Sbjct: 1 MSDLTKLSAVEIAGLVASGQTSAVEVTQAHLDRIAAVDGQINAFLHVDSEGALAAAREVD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R L G+P+ +KD TKG+ T S IL+G+RP Y+ST+ Q+L G VML Sbjct: 61 AQRAAGAQLGPLAGVPVAVKDVLTTKGVPTTVGSKILEGWRPPYDSTIVQRLQAAGTVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW TD+ PGGS GGS+AA+A + +IG+D Sbjct: 121 GKTNMDEFAMGSSTEYSAYGPTRNPW----DTDRI-PGGSGGGSAAALAAYEAPLAIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G+++F+ SLD G RTV D+A+L +AI G+D Sbjct: 176 TGGSIRQPGAVTGTVGAKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEAIGGHD 235 Query: 240 ECDATCVNLPVPDYERALD----QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVPD A + G+ +GI E+ + P + + + + L Sbjct: 236 PRDSTSIAAPVPDVVAAAKLGATGDLSGVRLGIVTEFAGEGAEPGVMAAFHEAVDTLTKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRS 352 GA+IVE+S PH +YALPAYY+I+P+E SSNLAR+DGVR+GLRV + + E+ TR Sbjct: 296 GAEIVEVSCPHFKYALPAYYLIAPSECSSNLARFDGVRFGLRVGDDGNRSLEEVMSLTRE 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTY LSS YD++Y +A+K+RTLI RDFT AFEQ VD +++PTTP Sbjct: 356 AGFGPEVKRRIMIGTYALSSGYYDAYYGQAQKVRTLITRDFTAAFEQ-VDALISPTTPFV 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AFPLG ++ M D+FT+ N+ G P ISVP L + +P+GLQ++ ++ Sbjct: 415 AFPLGARTSDPYQM--YLADLFTIPTNLYGGPGISVPCGLAD-GLPVGLQVMAPTMADDR 471 Query: 473 LFSVGQIIEKEAGYFRP 489 ++ V +E G P Sbjct: 472 MYRVAAALESAVGTLTP 488 >gi|314934065|ref|ZP_07841428.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus caprae C87] gi|313653176|gb|EFS16935.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus caprae C87] Length = 485 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/479 (46%), Positives = 320/479 (66%), Gaps = 19/479 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + + +++K+I E+V AIE ++ + +++ + + A AEE D Sbjct: 3 IRYESVEKLTEMIKNKEIKPSEVVKDIYAAIEETDPTIKSFLALDKENAIKKAEELD--- 59 Query: 64 INGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 N A+D L GIP+GIKD TK + T S +L+GF P YESTV KL D AV+ Sbjct: 60 -NLQAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHDENAVL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GKLNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+ Sbjct: 119 IGKLNMDEFAMGGSTETSYFKKTLNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+AI+L+ I+G Sbjct: 174 DTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAIVLETISGV 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+T + D+ + + I+G+ V +PKEY + +S + + ++ + LK GA+ Sbjct: 234 DANDSTSAPVEDVDFTSDIGKDIKGLKVALPKEYLGEGVSEEVKASVKEAVETLKSLGAE 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 + E+SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG Sbjct: 294 VGEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGA 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI +GT+ LSS YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG Sbjct: 354 EVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFET-YDVVVGPTAPTTAFNLG 412 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 +E ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 413 EEIDDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|326315170|ref|YP_004232842.1| glutamyl-tRNA(gln) amidotransferase subunit A [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372006|gb|ADX44275.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 501 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/487 (45%), Positives = 309/487 (63%), Gaps = 11/487 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L+ + V+E LR K +SAVE ++ ++ ++ + A++ + + A A D Sbjct: 6 SPLHTLGVAELAAALRGKQVSAVETARHFLARVQQ-HTGLGAFVSINEEATLAQARAQDA 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G A L G+PI KD F T+ + A S +L G++ +++TV +L D GAV LGK Sbjct: 65 AIAAGTAGPLAGVPIAHKDIFVTRDFPSTAGSKMLAGYQSPFDATVVTRLADAGAVTLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPV----ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LN DEFAMGS+NE S P+ +P R+ +T + PGGSSGGS+ AVA L A G Sbjct: 125 LNCDEFAMGSANENSAVAPLGADAPAPVRNPWATGR-VPGGSSGGSAVAVAARLAPAVTG 183 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL AI G Sbjct: 184 TDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAICG 243 Query: 238 YD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + D+T +++P D+ L SI G+ +GIP E+ + L+P + + + G Sbjct: 244 PDPDRDSTSLDVPAEDFTAKLGDSIDGLRIGIPAEFFGEGLAPDVRAAVDGALKEYEKLG 303 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGF 355 AK+V I+LP T+ ++P YYII+PAEASSNL+R+DGV++G R D+++MY+ TR+ GF Sbjct: 304 AKLVPITLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRARDYTDLVDMYKKTRAEGF 363 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIMIGTYVLS YD++YL+A+KIR +I DF AF++ D+I P PT A+ Sbjct: 364 GDEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIADDFQNAFKE-CDLIAGPVAPTVAWK 422 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG+ N+ + D+FT+ ++AGLP +SVPA E MP+GLQLIG F+E L + Sbjct: 423 LGEHGND--PLADYLADIFTLPASLAGLPGMSVPAGFGEGGMPVGLQLIGNYFQEGRLLN 480 Query: 476 VGQIIEK 482 +++ Sbjct: 481 AAHRLQQ 487 >gi|257869256|ref|ZP_05648909.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus gallinarum EG2] gi|257803420|gb|EEV32242.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus gallinarum EG2] Length = 490 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/487 (45%), Positives = 320/487 (65%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ E L SK+ISAV+L + I+ + +++++I + A A A+ D Sbjct: 1 MTELVSKSLEELHGMLVSKEISAVDLTAETFEQIKATEPKVDSFITLNESNAMALAKAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK + T A S IL F P Y++TV +K++ + +G Sbjct: 61 EKGIS-ESNVLAGIPIGIKDNIVTKDLLTTAASKILANFEPIYDATVMEKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG+S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGASTETSYFKKTKNAW---DHTK--VPGGSSGGSAAAVAAGQVPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G VG+KPTYGR SR G+I+FA SLDQ G +TR+V+D+A+ L AI+G+D Sbjct: 175 GGSIRQPASFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRSVKDNALALSAISGFDA 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + VPD+ L I+GM V +PKEY + + P + + + + GA + Sbjct: 235 KDSTSAGVAVPDFAAGLTGDIKGMKVALPKEYMGEGIQPGVREAVLKAAETFRALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVSVYYIIASSEASSNLQRFDGIRYGYRSENVKNLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIK+DF + F D+I+ P +PT AF LG+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKQDFDKVFAD-YDLIIGPASPTVAFGLGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +SVPA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YMNDILTIPVNLAGLPGMSVPAGFSE-GLPVGLQIIGKHFDEATMYQAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|295400454|ref|ZP_06810432.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294977357|gb|EFG52957.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 447 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 218/451 (48%), Positives = 302/451 (66%), Gaps = 12/451 (2%) Query: 41 MNAYIEVVAQKARAAAEESDKRIIN--GDARDLEGIPIGIKDCFATKGIHTQACSHILDG 98 M A++ + + ARA A+E D ++ D L GIPIGIKD TKG+ T S IL Sbjct: 1 MQAFLTLNEENARAKAKELDDKLSKEENDFGVLFGIPIGIKDNIVTKGLRTTCASKILYN 60 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 F P Y++TV ++L + GA+ +GKLNMDEFAMGSS E S + +PW + PGG Sbjct: 61 FDPIYDATVMERLNEAGAITVGKLNMDEFAMGSSTENSGFQLTRNPWDL-----ERVPGG 115 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS+AAVA ++G+DTGGSIRQPA+F G VG+KPTYGR SR G+++FA SLDQ Sbjct: 116 SSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQI 175 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 G ITRTV D+A LL+ IAG D D+T N+ VP+Y AL I+G+ + +PKEY + ++ Sbjct: 176 GPITRTVEDNAYLLQVIAGLDPMDSTSANVEVPNYVEALTGDIKGLKIAVPKEYLGEGVA 235 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 + ++ + L+ GA E+SLPH++YAL YY+++ +EAS+NLAR+DGVRYG R Sbjct: 236 EEVRQSVLDALKVLEKLGATWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGYRA 295 Query: 339 E-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 + K++++MY+ TRS GFG EVK RIM+GT+ LSS YD++Y +A+K+RTLIK+DF + F Sbjct: 296 DNAKNLIDMYKQTRSEGFGNEVKRRIMLGTFALSSGYYDAYYKKAQKVRTLIKQDFEKVF 355 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 E+ DVI+ PTTPT AF +G E S + ND+ T+ VN+AG+P ISVP + Sbjct: 356 EK-YDVIVGPTTPTPAFKIG--EKTSDPLTMYANDILTIPVNLAGVPGISVPCGFV-NGL 411 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 P+GLQ+IG+ F E T++ V E+ Y + Sbjct: 412 PVGLQIIGKHFDESTVYRVAHAFEQATDYHK 442 >gi|163789375|ref|ZP_02183814.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Carnobacterium sp. AT7] gi|159875229|gb|EDP69294.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Carnobacterium sp. AT7] Length = 484 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 315/482 (65%), Gaps = 12/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E D L K+++A E+V + I + ++ A+I + ++A A + D+ I+ Sbjct: 8 VEELHDMLVKKEVTAQEVVKAVFARINETEEKIGAFITLTEEEALEQARKVDEEGID-ST 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPIGIKD T G T A S IL+ F P Y++TVT+K+ + + +GKLNMDEFA Sbjct: 67 NVLSGIPIGIKDNIITDGTRTTAASKILEDFIPIYDATVTKKIKEATMIPVGKLNMDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MG S ETSYY +PW + DK PGGSSGGS+AAVA S+GTDTGGSIRQPA Sbjct: 127 MGGSTETSYYKKTRNPW----NLDK-VPGGSSGGSAAAVAAGQIPVSLGTDTGGSIRQPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +FTG VG+KPTYGR SR G+I+F SLDQ G TRTV+D+A++L AI+G+D D+ Sbjct: 182 AFTGIVGMKPTYGRVSRFGLIAFGSSLDQIGPFTRTVKDNALVLNAISGHDANDSMSYEG 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPD+ ++ ++GM +G+P EY + L + + + I K GA + E+SLPH+ Sbjct: 242 AVPDFTAGIEAGVKGMKIGVPTEYLNEKGLEVGVKEAVLKAIETFKSLGAIVEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y +PAYYII+ +EASSNL R+DGVRYG R E K + E++ +R+ GFG EVK RIM+G Sbjct: 302 KYGVPAYYIIASSEASSNLQRFDGVRYGYRSTEAKTLEEVFVKSRTEGFGMEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD+H+ +A + RTLI++DF F++ D+IL PTTPT+AF +G++ ++ +M Sbjct: 362 TFSLSSGFYDAHFKKAGQTRTLIRQDFDNVFKE-YDLILGPTTPTTAFGIGEQIDDPIAM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ TV VN+AG+PAIS+P +P+GLQLIG+ F E+T++ E+ + Sbjct: 421 --YLSDILTVPVNLAGVPAISIPCGFS-NDLPVGLQLIGKHFDEQTIYKAAYAFEQATDF 477 Query: 487 FR 488 + Sbjct: 478 HK 479 >gi|304436315|ref|ZP_07396293.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370720|gb|EFM24367.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 488 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 218/463 (47%), Positives = 303/463 (65%), Gaps = 10/463 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIINGDARDL 71 D L +ISA EL + + ++ + AY+ + A A A+ D KR L Sbjct: 12 HDMLARSEISARELTEDVLSRMDAVEGDVGAYLLETREGALAQADAVDAKRAAGEKIPFL 71 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP +KD T G+ T A S IL+ F P Y++TV KL AV+LGK N+DEFAMG Sbjct: 72 AGIPGAVKDNICTIGVRTTAASKILEHFVPPYDATVMTKLHAEDAVILGKTNLDEFAMGG 131 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPASF Sbjct: 132 STENSAFQPTHNPWDTAR-----VPGGSSGGSAAAVASGTAIWALGSDTGGSIRQPASFC 186 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G++++A SLDQ G +TR V D+A LL IAG+D D+T VP Sbjct: 187 GIVGLKPTYGRVSRYGLMAYASSLDQIGPLTRDVTDAAHLLNVIAGHDPMDSTASRANVP 246 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 DY +AL ++G+ +G+PKEY +D ++ ++ + ++ I+ ++ GA++ EISLPHT YA+ Sbjct: 247 DYTQALRADVKGLKIGLPKEYFIDGMNQEVEASVRKAIADMEAMGAEVREISLPHTDYAV 306 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+I+PAEA++NL RYDGV YG RV+G+D+++M TR+ FG EVK RI+IG Y LS Sbjct: 307 STYYLIAPAEAATNLERYDGVSYGARVDGEDLVDMMTRTRTEKFGAEVKRRILIGNYALS 366 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD++YL+A K+RTLI++DFT AFEQ VDV++TPT PT A+ +G+ + + Sbjct: 367 AGYYDAYYLKALKVRTLIQQDFTRAFEQ-VDVVMTPTAPTPAYRIGE---MTSPLQMYLQ 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 D+ TV +N+AGLP ISVP +P+GLQ+IG+P EET+ Sbjct: 423 DISTVPLNLAGLPGISVPCGFTAAGLPIGLQIIGRPLAEETIL 465 >gi|328957916|ref|YP_004375302.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Carnobacterium sp. 17-4] gi|328674240|gb|AEB30286.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Carnobacterium sp. 17-4] Length = 484 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 315/482 (65%), Gaps = 12/482 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E + L K+++A E+V + I + ++ A+I + ++A A + D+ I+ + Sbjct: 8 VEELHELLVKKEVTAQEIVKAVFARISETEDKIGAFITLTEEEALEQARKVDEEGIDPN- 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPIGIKD T G T A S IL+ F P Y++TVT+K+ + + +GKLNMDEFA Sbjct: 67 NVLSGIPIGIKDNIVTNGTRTTAASKILEDFVPIYDATVTKKVKEAKMISVGKLNMDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MG S ETSYY +PW + DK PGGSSGGS+AAVA S+GTDTGGSIRQPA Sbjct: 127 MGGSTETSYYKKTRNPW----NLDK-VPGGSSGGSAAAVAAGQIPVSLGTDTGGSIRQPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG+KPTYGR SR G+I+F SLDQ G TRTV+D+A++L AI+G+D D+ Sbjct: 182 AFNGIVGMKPTYGRVSRFGLIAFGSSLDQIGPFTRTVKDNALVLNAISGHDASDSMSYEG 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPD+ ++ ++GM +G+P EY + L + + + I K GA + E+SLPH+ Sbjct: 242 EVPDFTAGIESGVKGMKIGVPTEYLNEKGLEEGVKEAVLKAIDTFKSLGAIVEEVSLPHS 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y +PAYYII+ +EASSNL R+DGVRYG R E K + E+Y +R+ GFG EVK RIM+G Sbjct: 302 KYGVPAYYIIASSEASSNLQRFDGVRYGYRSPEAKTLDEVYVKSRTEGFGMEVKRRIMLG 361 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD+H+ +A + RTLI++DF F++ D+IL PTTPT+AF +G++ ++ +M Sbjct: 362 TFSLSSGFYDAHFKKAGQARTLIRQDFDNVFKE-FDLILGPTTPTTAFGIGEQIDDPIAM 420 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D+ TV VN+AG+PAIS+P +P+GLQLIG+ F EET++ E+ + Sbjct: 421 --YLSDILTVPVNLAGVPAISIPCGFS-NDLPVGLQLIGKHFDEETIYKAAYAFEQATDF 477 Query: 487 FR 488 + Sbjct: 478 HK 479 >gi|69246829|ref|ZP_00604138.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium DO] gi|257878460|ref|ZP_05658113.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,230,933] gi|257882879|ref|ZP_05662532.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,502] gi|257889343|ref|ZP_05668996.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,410] gi|257894355|ref|ZP_05674008.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,408] gi|258616018|ref|ZP_05713788.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecium DO] gi|260560047|ref|ZP_05832225.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium C68] gi|293559997|ref|ZP_06676505.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium E1162] gi|294621042|ref|ZP_06700234.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecium U0317] gi|314937825|ref|ZP_07845142.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133a04] gi|314941629|ref|ZP_07848509.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133C] gi|314948876|ref|ZP_07852245.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0082] gi|314951006|ref|ZP_07854073.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133A] gi|314993007|ref|ZP_07858403.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133B] gi|314996454|ref|ZP_07861497.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133a01] gi|68195062|gb|EAN09524.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium DO] gi|257812688|gb|EEV41446.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,230,933] gi|257818537|gb|EEV45865.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,502] gi|257825703|gb|EEV52329.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,410] gi|257830734|gb|EEV57341.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,408] gi|260073882|gb|EEW62206.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium C68] gi|291599356|gb|EFF30381.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Enterococcus faecium U0317] gi|291606085|gb|EFF35511.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium E1162] gi|313589436|gb|EFR68281.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133a01] gi|313592530|gb|EFR71375.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133B] gi|313596861|gb|EFR75706.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133A] gi|313599520|gb|EFR78363.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133C] gi|313642856|gb|EFS07436.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0133a04] gi|313644666|gb|EFS09246.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium TX0082] Length = 490 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/489 (45%), Positives = 321/489 (65%), Gaps = 11/489 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTELHNRSLEELHHMLVSKEITVQDLTKTTFERIKETEPEVEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNVLAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DPTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEKEAGYFR 488 E+ + + Sbjct: 471 FEQATEFHK 479 >gi|261207464|ref|ZP_05922150.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium TC 6] gi|289565875|ref|ZP_06446316.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium D344SRF] gi|260078355|gb|EEW66060.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium TC 6] gi|289162335|gb|EFD10194.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium D344SRF] Length = 490 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/489 (45%), Positives = 321/489 (65%), Gaps = 11/489 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTELHNRSLEELHHMLVSKEITVQDLTKATFERIKETEPEVEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNVLAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DPTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEKEAGYFR 488 E+ + + Sbjct: 471 FEQATEFHK 479 >gi|295426517|ref|ZP_06819167.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus amylolyticus DSM 11664] gi|295063885|gb|EFG54843.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus amylolyticus DSM 11664] Length = 479 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/478 (46%), Positives = 313/478 (65%), Gaps = 20/478 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S +ISA +L + I++++ ++NA+I V A+ A ++ L GI Sbjct: 14 KLASGEISADQLAKDTVANIKDTDKKLNAWI-TVEDDAKPAEN------LDFSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PIGIKD T G+ T A SHILD F P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIGIKDNIVTNGVKTTAASHILDNFMPMYDATVISKLKAAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQP++F G Sbjct: 127 HSYFGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPSAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F+ SLDQ G++++ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFSSSLDQIGVMSKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY +D + + + Q+ I LK+ GA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MDAVDGDMREAIQKQIDLLKENGAIITEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGTEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + FE DVI+ P T T AF +G+E ++ M + ND+ Sbjct: 361 SYDKFFRQAAKVRTLICNDFDKIFENN-DVIVGPVTTTPAFGIGEEVSDPVKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF--RP 489 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F +E+ ++ RP Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQIMAKRFDEGNVFKTADFVERNNRFYEKRP 474 >gi|262282067|ref|ZP_06059836.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sp. 2_1_36FAA] gi|262262521|gb|EEY81218.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sp. 2_1_36FAA] Length = 488 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 212/486 (43%), Positives = 305/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREGAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLEILGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|284802199|ref|YP_003414064.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes 08-5578] gi|284995341|ref|YP_003417109.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes 08-5923] gi|284057761|gb|ADB68702.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes 08-5578] gi|284060808|gb|ADB71747.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes 08-5923] Length = 483 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/483 (46%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLAEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP E +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSE-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|323467077|gb|ADX70764.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus helveticus H10] Length = 479 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/474 (47%), Positives = 310/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I VV A + K L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVVDDAKPAENLDFSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SH+L + P Y++TV KL GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHMLYNYMPMYDATVISKLKKAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVAG A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGGDEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGEMREVIQKQIDALKDAGAIINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R E K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAEDTKNLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICNDFDKIFAEN-DVIVGPTTTEPAFDIGSEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|224370235|ref|YP_002604399.1| GatA2 [Desulfobacterium autotrophicum HRM2] gi|259647212|sp|C0QKZ5|GATA_DESAH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|223692952|gb|ACN16235.1| GatA2 [Desulfobacterium autotrophicum HRM2] Length = 490 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 215/487 (44%), Positives = 322/487 (66%), Gaps = 14/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ + + +R L S +IS+ +L + I+ ++ + A+I V A A AA +D+R Sbjct: 2 ELHELTLEGARALLLSGEISSKDLTTCLLDRIKTHDADLGAFITVDAAGALEAATAADER 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+ L GIP+ +KD T G+ T S IL+ F P Y++T L GAV++GK Sbjct: 62 IARGEDAPLLGIPLALKDLLCTSGVRTTCASKILENFVPTYDATAVTLLKQAGAVIVGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEF MGSS E S + +PW ++D PGGSSGGS+AAVA +C A++GTDTGG Sbjct: 122 NLDEFGMGSSTENSAFHLTRNPW-NLDHV----PGGSSGGSAAAVAARMCTAALGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KP+YGR SR G++++A SLDQ G ITRTV+D+A+++ I+G+D D Sbjct: 177 SIRQPASHCGVVGLKPSYGRVSRFGMVAYASSLDQIGPITRTVKDAALMMNVISGHDPKD 236 Query: 243 ATCVNLPVPDYERAL----DQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGA 297 +T + PD+ +A + + GM GIP+EY + L P ++++++ L+D G Sbjct: 237 STSAAIDKPDFTQAFAGFDAKGLAGMKAGIPREYIGMKGLDPEVERSFKNACKVLEDLGV 296 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFG 356 +++++SLPHT +A+ AYY+++P+EAS+NL+RYDGV+YG R G D+++MY+ TRS GFG Sbjct: 297 EVIDVSLPHTNFAVAAYYVLAPSEASANLSRYDGVKYGFRQTGCDDLMDMYKQTRSSGFG 356 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTY LS+ YD +Y RA ++RTLI DF++AF+Q D+IL+P PT AF + Sbjct: 357 PEVKRRIIMGTYALSAGYYDEYYGRASRVRTLIMADFSKAFDQ-CDIILSPVAPTPAFKI 415 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G EN + D+FT++ NMAG+P +SVP A+ +P+GLQ++G+ F E ++ Sbjct: 416 G--ENVDDPLTMYLGDIFTLSANMAGIPGLSVPCAMSTTGLPIGLQILGRRFDEMSVLKA 473 Query: 477 GQIIEKE 483 G +E+ Sbjct: 474 GYGLEQR 480 >gi|324990751|gb|EGC22687.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis SK353] Length = 488 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 212/486 (43%), Positives = 304/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S IL ++P + +T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKILYNYKPIFNATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E ++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEAIIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|323341296|ref|ZP_08081541.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus ruminis ATCC 25644] gi|323091290|gb|EFZ33917.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus ruminis ATCC 25644] Length = 487 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 212/474 (44%), Positives = 314/474 (66%), Gaps = 11/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +KD SA EL + I+ +++A+I + ++A A D + I+ + L+GIP Sbjct: 15 LVNKDFSAEELAKETFETIKKREEKIDAFITLDEERAMEKARAVDAKGID-EGNVLDGIP 73 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +GIKD TKG+ T A S +L+ F P Y +TV KL + G + +GKLNMDEFAMGSS ET Sbjct: 74 VGIKDNIVTKGLKTTAASKMLENFNPIYNATVMDKLDEKGMITVGKLNMDEFAMGSSTET 133 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + + W D T PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G VG Sbjct: 134 SAFKKTKNAW---DQTK--VPGGSSGGSAAAVASGEVIAALGSDTGGSIRQPAAFNGIVG 188 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+FA S+DQ G +TR+V D+A++L AI+G+D D T + VPD+ + Sbjct: 189 LKPTYGRVSRYGLIAFASSMDQIGPLTRSVYDNALMLNAISGHDFRDFTSSSKEVPDFTK 248 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 +D+ ++GM + +PKEY + + + + + I ++ GA + E+SLPHT+Y +P YY Sbjct: 249 GIDEGVKGMRIAVPKEYFAEGVDADVQQAVKDAIKKFEELGATVDEVSLPHTKYGVPVYY 308 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 II+ +EASSNL R+DG+RYG R E K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 309 IIASSEASSNLQRFDGIRYGFRAEDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLSAGT 368 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD+ + +A ++RTLI RD+ FE D+IL PT PT+A+ +G++ ++ +M ND+ Sbjct: 369 YDAFFKKAAQVRTLICRDYENVFENH-DLILGPTAPTTAYGIGEKIDDPVTM--YMNDIL 425 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +S+PA + +P+G+QL+ FRE+TL+ G E+ + + Sbjct: 426 TIPVNLAGLPGMSLPAGFSD-GLPIGMQLVAPRFREDTLYKAGFAFEQATDFHK 478 >gi|224826067|ref|ZP_03699170.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lutiella nitroferrum 2002] gi|224601704|gb|EEG07884.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lutiella nitroferrum 2002] Length = 483 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/469 (47%), Positives = 303/469 (64%), Gaps = 9/469 (1%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K +S+ EL Y+ I N +NA+I V K A A +D G A L G+ Sbjct: 12 QLAAKAVSSEELAGLYLDRIAALNPTLNAFISVDRDKTLAEARAADALRAAGQAGPLTGV 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F +G T S +LD F Y++ V ++ G V LG+ NMDEFAMGSSNE Sbjct: 72 PIAHKDIFCQQGWKTSCGSKMLDNFVSPYDAHVIEQCRAAGLVTLGRTNMDEFAMGSSNE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S+YGPV +PW PGGSSGGS+AAVA L + GTDTGGSIRQPAS G Sbjct: 132 NSFYGPVKNPWDL-----AAIPGGSSGGSAAAVAARLAPIATGTDTGGSIRQPASHCGVT 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYG SR G++++A SLDQ G + +T D A+LL +AG+D+ D+T + DY Sbjct: 187 GIKPTYGVVSRYGMVAYASSLDQGGPLAQTAEDCALLLNVMAGFDQRDSTSLERAKEDYS 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R L+ + G+ +G+P+EY + LS + I+ LK GA++VEISLP+TQ ++PAY Sbjct: 247 RDLNAPLSGLKIGLPREYFAEGLSADVAGVVDGAIAELKKLGAEVVEISLPNTQLSIPAY 306 Query: 315 YIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+PAEAS+NL+RYDGVRYG R E KD+++MYE TR+ GFG EVK RIM+GTYVLS Sbjct: 307 YVIAPAEASTNLSRYDGVRYGHRAAEYKDLVDMYEKTRAEGFGAEVKRRIMVGTYVLSHG 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+KIR LI DF AFEQ DVIL P PT+AF +G++ ++ M +D+ Sbjct: 367 YYDAYYLKAQKIRRLIANDFKAAFEQ-CDVILGPVAPTAAFNIGEKSDDPVQM--YLSDI 423 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +T++VN+AGLP +SVPA P+GLQ+IG F E + +V ++ Sbjct: 424 YTLSVNLAGLPGMSVPAGFAANGRPVGLQIIGNYFGEAKMLNVAHQFQQ 472 >gi|255318767|ref|ZP_05359993.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Acinetobacter radioresistens SK82] gi|255304023|gb|EET83214.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Acinetobacter radioresistens SK82] Length = 492 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/479 (47%), Positives = 323/479 (67%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L++ S+ EL Y+ IE ++Q+N+Y+ V A++A A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLKTAQFSSRELTQHYLNRIEKIDAQVNSYVTVTAEQALAQADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G A L G+PI KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AAIKTGTATVLTGVPIAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKGKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E S+YG +PW PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSENSFYGATKNPWNL-----SCVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQ G + R+ D A L+ +AG+DE Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDE 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T +N V DY L+ S++G+ VGIPK+Y ++D L+ + ++ + L++ GA Sbjct: 236 KDSTSMNQEVDDYVANLNTASVKGLRVGIPKQYFQVDGLNAEVKARVEESLKKLEEMGAI 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPVDLMDLYKRSRSEGFGT 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFEQ VDVI P+ PT+A+ LG Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEQ-VDVIAAPSAPTTAYQLG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ ++ D++T+AVN+AGLPAI+ P ++P+GLQLIG + E L SV Sbjct: 415 AAQD---TVAMYLGDIYTLAVNLAGLPAINAPIGFDANQLPVGLQLIGNYWSESQLLSV 470 >gi|242241738|ref|ZP_04796183.1| possible amidase [Staphylococcus epidermidis W23144] gi|242234828|gb|EES37139.1| possible amidase [Staphylococcus epidermidis W23144] Length = 485 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 219/483 (45%), Positives = 324/483 (67%), Gaps = 13/483 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F ++ + + +++K+I ++V AIE ++ + +++ + + A AEE D+ + Sbjct: 3 IRFESIEKLTELIKNKEIKPSDVVKDIYAAIEETDPTIKSFLALDKENAIKKAEELDE-L 61 Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 D D L GIP+GIKD TK + T S +L+GF P YESTV KL D AV++GK Sbjct: 62 QAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHDENAVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTG Sbjct: 122 LNMDEFAMGGSTETSYFKKTLNPF---DHT--AVPGGSSGGSAAAVAAGLVPFSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS+ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AI+G D Sbjct: 177 GSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDAN 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ + + I+ + + +PKEY + +S + + ++ + LK GA++ E Sbjct: 237 DSTSAPVDDVDFTSDIGKDIKDLKIALPKEYLGEGVSEEVKTSVKEAVETLKSLGAEVDE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG+EVK Sbjct: 297 VSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGEEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI +GT+ LSS YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF +G+E Sbjct: 357 RRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFES-YDVVVGPTAPTTAFNIGEEI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ +M ND+ T VN+AGLP ISVP + P+GLQLIG+PF E+TL+ V Sbjct: 416 DDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQLIGKPFDEKTLYRVAYQF 472 Query: 481 EKE 483 E + Sbjct: 473 ETQ 475 >gi|325956256|ref|YP_004286866.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus acidophilus 30SC] gi|325332821|gb|ADZ06729.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus acidophilus 30SC] gi|327183072|gb|AEA31519.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus amylovorus GRL 1118] Length = 479 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/474 (47%), Positives = 311/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A + K L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDDAKPAENLDYSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL G ++GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGVTLVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVAG A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGEMREVIQKQIDTLKDAGAIINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGTEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICNDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQIMAKRFDEGNVFKTADFIERSNKFY 470 >gi|71736291|ref|YP_276296.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. phaseolicola 1448A] gi|109891970|sp|Q48E92|GATA_PSE14 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|71556844|gb|AAZ36055.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322513|gb|EFW78606.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. glycinea str. B076] gi|320330018|gb|EFW86005.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. glycinea str. race 4] gi|330987071|gb|EGH85174.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. lachrymans str. M301315] Length = 483 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----QCVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+S Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAVVKEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + N+ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTND 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|329769735|ref|ZP_08261136.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemella sanguinis M325] gi|328838097|gb|EGF87715.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemella sanguinis M325] Length = 485 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 215/470 (45%), Positives = 307/470 (65%), Gaps = 11/470 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 +L++K+I +LV + I+ + ++ ++I V + A AEE D+R GD L G Sbjct: 14 KLKNKEIKPSDLVKESLDRIKATEDKIGSFITVTEEVALKQAEELDRRQEAGDVEGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD TK I T S IL+GF P Y +TV KL +++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIVTKDIQTTCASKILEGFNPIYSATVMDKLNAENPILMGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSYY +P +D+ PGGSSGGS+ +VA + ++G+DTGGS+RQPAS+ G Sbjct: 134 ETSYYKLTRNP-HDLDAV----PGGSSGGSATSVAAGQVSFALGSDTGGSVRQPASYCGI 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TRTV+D+A +L+ I+G D D T + VP++ Sbjct: 189 VGLKPTYGRVSRFGLVAFASSLDQIGPMTRTVKDNARVLEIISGLDAHDMTSAPVEVPEF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G + +PKEY + + K G+ +L+ GA + E+SLP T + + Sbjct: 249 SKIITGDIKGKKIALPKEYFGAGIDEDVKKAVLDGVKYLESQGAIVEEVSLPSTDHVIST 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ AEASSNL+R+DG+RYG R ++ E+Y+ TR GFG EVK RIM+GTYVLSS Sbjct: 309 YYVIASAEASSNLSRFDGIRYGYRSPNATNLEEIYKKTRGEGFGAEVKRRIMLGTYVLSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +A+++RTLIK+DF FE+ DVI+ PT PT AF +G+E ++ +M ND Sbjct: 369 GYYDAYYKKAQQVRTLIKQDFDRVFEE-YDVIIGPTAPTVAFNIGEEIDDPVTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T+ VNMAGLP IS+P K+ P+G+Q+I +PF E TL+ V E+ Sbjct: 426 ILTIPVNMAGLPGISIPCGFKGKR-PIGMQIIAKPFAESTLYDVAYNFEQ 474 >gi|42519592|ref|NP_965522.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus johnsonii NCC 533] gi|81667537|sp|Q74I52|GATA_LACJO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|41583881|gb|AAS09488.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus johnsonii NCC 533] Length = 479 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/475 (46%), Positives = 313/475 (65%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V ++A+ A ++ + L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDEEAKPAEN------LDFNKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILYNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGETHNPW----NLDK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPDY Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEQEVPDYT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ V +PKEY +D + + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRVAVPKEY-MDAVDGEMREVIQKQIDVLKDAGAIINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + FE+ DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFEEN-DVIVGPTTTEPAFGIGEEISDPIKMYN--NDL 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E +F V IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPAGLQIMAKRFDEGNVFKVADFIERNNKFYE 471 >gi|330937962|gb|EGH41749.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. pisi str. 1704B] Length = 483 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/473 (46%), Positives = 310/473 (65%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L K S+ EL + I + Q+N++I + A A+ +D R G Sbjct: 4 MTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK NMDE Sbjct: 64 ENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YGPV +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSANESSHYGPVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+T + Sbjct: 179 PAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+SLP+ Sbjct: 239 DEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVSLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ RIM+ Sbjct: 299 LQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + N+ Sbjct: 359 GAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAD-VDVILGPTTPNPAWKIGAKTND--P 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 IAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|224476956|ref|YP_002634562.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus carnosus subsp. carnosus TM300] gi|254790402|sp|B9DMT8|GATA_STACT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|222421563|emb|CAL28377.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus carnosus subsp. carnosus TM300] Length = 485 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 219/486 (45%), Positives = 323/486 (66%), Gaps = 19/486 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + + +++K+I E+V AIE ++ + +++ + + A AEE D+ Sbjct: 3 IRYESVEKLSEMIKNKEIKPSEVVKDIYDAIEETDPTIKSFLALDKENAMKKAEELDEL- 61 Query: 64 INGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 A+D L GIP+GIKD T+G+ T S +L+GF P YESTV KL D AV+ Sbjct: 62 ---QAKDQMEGKLFGIPMGIKDNIITEGLETTCASKMLEGFVPIYESTVMNKLHDENAVL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GKLNMDEFAMG S ETSYY ++P+ D T PGGSSGGS+AAVA L S+G+ Sbjct: 119 IGKLNMDEFAMGGSTETSYYKKTVNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+ I G Sbjct: 174 DTGGSIRQPAAYCGIVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLETIVGE 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T + D+ + + I+GM + +PKEY + ++ + + + + L+ GA Sbjct: 234 DKHDSTSAPVADNDFTSDIGKDIRGMKIALPKEYLGEGVNDEVKEAVRNAVEILEGEGAI 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQ 357 + E+SLP+T Y +P+YY+I+ +EASSNL+R+DG+RYG + + L E+Y+ +RS GFG+ Sbjct: 294 VEEVSLPNTGYGIPSYYVIASSEASSNLSRFDGIRYGFHSKEANTLDELYKLSRSEGFGK 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++GT+ LSS YD++Y +++K+RTLI++DF FE DV++ PTTPT AF LG Sbjct: 354 EVKRRILLGTFALSSGYYDAYYKKSQKVRTLIRQDFERVFED-YDVVVGPTTPTPAFNLG 412 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E N+ +M ND+ T VN+AGLP IS+P + P+GLQ IG+PF E+TL+ V Sbjct: 413 EEINDPLTM--YANDLLTTPVNLAGLPGISIPCGQTNDR-PIGLQFIGKPFDEKTLYRVA 469 Query: 478 QIIEKE 483 E++ Sbjct: 470 YQFEQQ 475 >gi|293381900|ref|ZP_06627868.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus crispatus 214-1] gi|290921547|gb|EFD98581.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus crispatus 214-1] Length = 479 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/474 (47%), Positives = 313/474 (66%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A+ +D ++ L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDD-----AKPADN--LDYSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGELREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|298674976|ref|YP_003726726.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanohalobium evestigatum Z-7303] gi|298287964|gb|ADI73930.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanohalobium evestigatum Z-7303] Length = 475 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/480 (44%), Positives = 310/480 (64%), Gaps = 18/480 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++S+ ++ + S+ E+++SY++ I + S+MN Y V +A A + DK NG Sbjct: 5 MSISKIKNEIAK--TSSEEVLNSYLEKI--NKSKMNGY-STVYDEAVEEARDIDK---NG 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P+ +KD +T GI T CS IL+G+ P Y++ V ++L GA+++GK NMDE Sbjct: 57 HNGILAGVPVAVKDNISTDGIPTTCCSRILEGYTPPYDAHVVERLKSEGAIVIGKTNMDE 116 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG+S ETS YGP ++PW T K PGGSSGGS+A +A S+G+DTGGS+R Sbjct: 117 FAMGTSTETSCYGPTLNPW----DTGKV-PGGSSGGSAAVIAADEAPVSLGSDTGGSVRC 171 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+ G VG+KPTYG SR G+IS+A SL+Q G + V D AI++ I G+D D+T V Sbjct: 172 PASYCGVVGLKPTYGTVSRYGLISYANSLEQIGPLANNVSDVAIMMDVIGGHDTRDSTSV 231 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + +Y+ AL + G+ +GIP+EY + + P ++++ I +D GA ++S+P+ Sbjct: 232 SQKT-NYQNALKDDVNGLKIGIPEEYFGEGIYPEVEESVWNAIHKFEDMGATWEKVSMPN 290 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T YAL AYYII+ +EASSNLAR+DG RYG R +G + M TR+ GFG EV+ RI++G Sbjct: 291 TSYALSAYYIIAMSEASSNLARFDGTRYGYRADGDNWHVMASRTRAQGFGTEVQRRILLG 350 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD +YL+A K+RTL+K+DF A VDV++TPT PT+AF LG++ + S+ Sbjct: 351 TYALSAGYYDKYYLKALKVRTLVKQDFENALSN-VDVLMTPTMPTTAFKLGEKIKDPLSL 409 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 DV TV VN+AG+P+ISVP + +P+GLQ+IG+ F E T+ E+ Y Sbjct: 410 --YLADVNTVPVNLAGVPSISVPCGFSD-GLPIGLQIIGKHFNESTILQAAYSFEQNTDY 466 >gi|257898305|ref|ZP_05677958.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium Com15] gi|257836217|gb|EEV61291.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium Com15] Length = 490 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 319/483 (66%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTKLHNRSLEELHHMLVSKEITVQDLTKATFERIKETEPEIEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNILAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSTGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|217967553|ref|YP_002353059.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dictyoglomus turgidum DSM 6724] gi|217336652|gb|ACK42445.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dictyoglomus turgidum DSM 6724] Length = 483 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 211/476 (44%), Positives = 302/476 (63%), Gaps = 15/476 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +D ++K++S E+V+ YI I+ + A++ V ++ +K+ D+ Sbjct: 4 IKEIKDLYKNKEVSIKEVVEYYINKIKEWEPYIKAFLYVPYDNIEEQVKDLEKK----DS 59 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PI IKD TK I T S IL+ F P Y++TV ++L +NGA+++GK N+DEF Sbjct: 60 KLPLYGVPIAIKDNILTKDIRTTCASKILENFIPPYDATVIKRLKENGAIIIGKTNLDEF 119 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S +GP +PW + PGGSSGGS+A V+ S+G+DTGGSIR P Sbjct: 120 AMGSSCENSAFGPTKNPWDI-----ERVPGGSSGGSAACVSAGEVPVSLGSDTGGSIRLP 174 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASFTG +G+KPTYG SR G+++FA SLDQ G RTV D AI+L+ IAG+D D+T Sbjct: 175 ASFTGVIGLKPTYGLVSRFGLVAFASSLDQIGPFGRTVEDIAIVLQVIAGHDPMDSTSSP 234 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +P+Y +L +S++ VGIPKE +S + ++ K+ G K+ EISLP Sbjct: 235 YEIPNYLESLGKSVKDWKVGIPKELWQKGVSEEVLIILEKSFDVFKEMGVKVEEISLPSL 294 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +YALP YYIIS +EASSNLARYDGV+YG R +D++ MY+ TR GFG EVK RI++G Sbjct: 295 EYALPVYYIISTSEASSNLARYDGVKYGYRDFWAEDLISMYKQTRGKGFGSEVKRRIILG 354 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++YL+A K+R LI+ +F EAF++ VD+I +PT+P F LG E S + Sbjct: 355 TYALSAGYYDAYYLKATKVRRLIRMEFEEAFKK-VDIIASPTSPVLPFKLG--ERISDPL 411 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ T+ VN+AG+PAIS+PA +P+G+Q + F E+ L I ++ Sbjct: 412 QMYLTDIMTIPVNLAGIPAISMPAGFY-NNLPVGIQFMSPFFTEDRLLQFAYIYQQ 466 >gi|294614137|ref|ZP_06694058.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium E1636] gi|291592987|gb|EFF24575.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium E1636] Length = 490 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 319/483 (66%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTKLHNRSLEELHHMLVSKEITVQDLTKATFERIKETEPEIEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNILAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|262047043|ref|ZP_06020002.1| glutamyl-tRNAGln amidotransferase subunit A [Lactobacillus crispatus MV-3A-US] gi|312984358|ref|ZP_07791699.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus crispatus CTV-05] gi|260572620|gb|EEX29181.1| glutamyl-tRNAGln amidotransferase subunit A [Lactobacillus crispatus MV-3A-US] gi|310894252|gb|EFQ43333.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus crispatus CTV-05] Length = 479 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/474 (47%), Positives = 313/474 (66%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A+ +D ++ L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDD-----AKPADN--LDYSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGEMREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|257482245|ref|ZP_05636286.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011514|gb|EGH91570.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 483 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----QCVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+S Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAVVKEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + N+ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTND 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PVAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|168704720|ref|ZP_02736997.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Gemmata obscuriglobus UQM 2246] Length = 487 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/412 (47%), Positives = 275/412 (66%), Gaps = 9/412 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD TKG+ T S +L F P Y++ ++L AV+ GK NMDEFAMG Sbjct: 72 LAGVPVAVKDVLCTKGVRTTCSSKMLANFVPPYDADAVERLKGADAVVFGKTNMDEFAMG 131 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS E S + +PW + PGGSSGGS+A VAG S+GTDTGGSIRQPA+ Sbjct: 132 SSTENSAFQATRNPWDV-----ERIPGGSSGGSAAVVAGCQAPLSLGTDTGGSIRQPAAL 186 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+I+FA SLDQ G T V D A++++AIAG+D D+T V PV Sbjct: 187 CGIVGLKPTYGRVSRYGLIAFASSLDQVGPFTHDVTDCALMMEAIAGHDARDSTSVAEPV 246 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 P Y R ++ ++G+ +G+PKE+ L P ++ + + + GA +V++SLPH+ YA Sbjct: 247 PHYTRTVNDPVKGLRIGVPKEFFGQGLDPEVEAAVRGALKEYEKLGATLVDVSLPHSPYA 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTYV 369 L AYYI++PAEASSNLAR+DG+ YG R K D++ Y +R GFG EV+ RI++GTYV Sbjct: 307 LAAYYIVAPAEASSNLARFDGMHYGHRTATKGDLIATYSKSRGEGFGPEVQRRIILGTYV 366 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS D++YL+A K+R L+K+DF EAF+ DV++ PTTPT+AF G++ ++ + Sbjct: 367 LSSGYKDAYYLKALKVRRLVKKDFDEAFKT-CDVVMGPTTPTAAFKAGEKSDD--PLALY 423 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +DV+TV+ N+AG+P +S+P + +P+GLQL+G PF EE L V ++ E Sbjct: 424 LSDVYTVSCNLAGIPGLSMPCGFTQAGLPIGLQLLGAPFEEEKLLRVARMYE 475 >gi|26987667|ref|NP_743092.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas putida KT2440] gi|39931528|sp|Q88PB9|GATA_PSEPK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|24982351|gb|AAN66556.1|AE016284_4 glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas putida KT2440] Length = 483 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 310/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L K S+ EL + + I+ + Q+N++I V A A +D R Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISVTEDLALGQARAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G PI KD F T G+ T S +LD F+ Y++TV KL + G V LGK N Sbjct: 61 AAGETSALLGAPIAHKDLFCTNGVRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPATTGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + PVPDY +L+ S+QG+ +G+PKEY L P I Q + L+ GA + EIS Sbjct: 236 TSIEEPVPDYSASLNASLQGLRIGLPKEYFGAGLDPRIADLVQASVKELEKLGAVVKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEEPKDLTDLYKRSRGEGFGVEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++Y++A++IR LIK DF AF VD+IL PTTP A+ LG + + Sbjct: 356 IMVGTYALSAGYYDAYYVKAQQIRRLIKNDFMAAFND-VDLILGPTTPNPAWKLGAK--S 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 413 SDPVAAYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|293557125|ref|ZP_06675679.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium E1039] gi|291600694|gb|EFF30992.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium E1039] Length = 490 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 319/483 (66%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTKLHNRSLEELHHMLISKEITVQDLTKATFERIKETEPEIEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNILAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|260102791|ref|ZP_05753028.1| glutamyl-tRNA(Gln) amidotransferase [Lactobacillus helveticus DSM 20075] gi|260083395|gb|EEW67515.1| glutamyl-tRNA(Gln) amidotransferase [Lactobacillus helveticus DSM 20075] gi|328462074|gb|EGF34247.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus helveticus MTCC 5463] Length = 479 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/474 (47%), Positives = 309/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I VV A + K L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVVDDAKPAENLDFSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SH+L + P Y++TV KL GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHMLYNYMPMYDATVISKLKKAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVAG A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGGDEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGEMREVIQKQIDALKDAGAIINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R E K +L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAEDTKSLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICNDFDKIFAEN-DVIVGPTTTEPAFDIGSEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|330877212|gb|EGH11361.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963989|gb|EGH64249.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. actinidiae str. M302091] Length = 483 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIAQLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+S Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + N+ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTND 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|255026041|ref|ZP_05298027.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes FSL J2-003] Length = 483 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/483 (46%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKSLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDLSR-----VPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDVNDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP E +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSE-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|310826561|ref|YP_003958918.1| glutamyl-tRNA(Gln) amidotransferase [Eubacterium limosum KIST612] gi|308738295|gb|ADO35955.1| glutamyl-tRNA(Gln) amidotransferase [Eubacterium limosum KIST612] Length = 487 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 212/486 (43%), Positives = 293/486 (60%), Gaps = 10/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ + V E + K++S E+ + + I+ +++ Y+ + + A AEE D Sbjct: 2 ELSQLTVHEINGLIEKKEVSVKEVTQAAVDRIDAVEDKVDGYLCLTTETAMKEAEELDGL 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +D LEGIP +KD T GI T S IL F P Y S V +L ++LGK Sbjct: 62 IAKEGRKDVLEGIPYALKDNMCTDGIQTTCASKILGDFVPPYNSEVYDRLLAQKGILLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW D T PGGSSGGS+ VA + S+G+DTG Sbjct: 122 ANMDEFAMGSSTENSAFKVTKNPW---DLTR--VPGGSSGGSAVVVASDMAYYSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G+++FA SLDQ G T+ V D AI+L AIAG+D Sbjct: 177 GSIRQPAAFCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVEDCAIVLSAIAGHDPK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + + DY + L + +GM +G+ + + + L P + I + GA+IV+ Sbjct: 237 DSTSLKVDKKDYTQNLKEGAKGMKIGVAQAFMGEGLQPEVRAAIDSAIDTYRAMGAEIVD 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 +S + YAL AYY+IS AEASSNLARYDG+RYG+R E D+++MY TR+ GFG EVK Sbjct: 297 VSFEYLDYALSAYYLISSAEASSNLARYDGIRYGVRAEEYADLVDMYRKTRTQGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y +A ++RTLI DF F+ DV+LTPTT +AF +G++ Sbjct: 357 RRIMLGTYALSSGYYDAYYKKAMQVRTLIMDDFKNVFDS-CDVLLTPTTAKTAFGIGEKT 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N M D++TV VN+AG+P IS+P MP+G+QL+G EE + Sbjct: 416 GNPLEM--YLTDIYTVPVNIAGIPGISIPCGFDNDGMPIGMQLLGPVLSEEKILQAAYAF 473 Query: 481 EKEAGY 486 E+E + Sbjct: 474 ERETAF 479 >gi|227889456|ref|ZP_04007261.1| Glu-tRNAGln amidotransferase subunit A [Lactobacillus johnsonii ATCC 33200] gi|227849934|gb|EEJ60020.1| Glu-tRNAGln amidotransferase subunit A [Lactobacillus johnsonii ATCC 33200] Length = 479 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/475 (46%), Positives = 313/475 (65%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V ++A+ A ++ + L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDEEAKPAEN------LDFNKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILYNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGETHNPW----NLDK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPDY Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEQEVPDYT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ V +PKEY +D + + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRVAVPKEY-MDAVDGEMREVIQKQIDVLKDAGAIINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + FE+ DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFEEN-DVIVGPTTTEPAFGIGEEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E +F V IE+ ++ Sbjct: 418 LTISANLAGIPAGSVPAGLVD-GMPAGLQIMAKRFDEGNVFKVADFIERNNKFYE 471 >gi|47092908|ref|ZP_00230690.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Listeria monocytogenes str. 4b H7858] gi|226224358|ref|YP_002758465.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes Clip81459] gi|259647219|sp|C1KW54|GATA_LISMC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|47018734|gb|EAL09485.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Listeria monocytogenes str. 4b H7858] gi|225876820|emb|CAS05529.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328466507|gb|EGF37650.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes 1816] Length = 483 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LSGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSNSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP + +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|226943391|ref|YP_002798464.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Azotobacter vinelandii DJ] gi|259647204|sp|C1DQ37|GATA_AZOVD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226718318|gb|ACO77489.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Azotobacter vinelandii DJ] Length = 483 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/464 (47%), Positives = 307/464 (66%), Gaps = 10/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K+ S+VEL ++ + I + +N++I V A++A A +D R G++ L G P Sbjct: 13 LAAKEFSSVELSEALLARIAELDPGLNSFITVTAEQALEQARAADARRAAGESGALLGAP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F TKG+ T S ILD F Y++TV ++L G V LGKLNMDEFAMGS++E+ Sbjct: 73 IAHKDLFCTKGVRTSCASKILDDFIAPYDATVVERLAAAGCVSLGKLNMDEFAMGSASES 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW + + PGGSSGGS+AAVA L A+ G+DTGGSIRQPA+ T G Sbjct: 133 SHYGPVRNPWNT-----ECVPGGSSGGSAAAVAARLVPAATGSDTGGSIRQPAALTNLTG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I++A SLDQ G + R+ D A+LL A+AG+D D+TCV+ PV DY Sbjct: 188 LKPTYGRVSRWGMIAYASSLDQGGPLARSAEDCALLLSAMAGFDPKDSTCVDQPVDDYLA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL + + G+ +G+P+EY L P + + LK GA + EI LP Q+A+PAYY Sbjct: 248 ALHRPLAGLRIGLPREYFGAGLDPRLSDAVMACVEELKKLGATVKEIGLPSMQHAIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+R+DGVR+G R E LE +Y+ +R GFG EVK RIM+GTY LS+ Sbjct: 308 VIAPAEASSNLSRFDGVRFGYRCENPQSLEDLYKRSRGEGFGAEVKRRIMVGTYALSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LI+ DF AF++ VD+IL PTTP A+ LG E + D++ Sbjct: 368 YDAYYLKAQKIRRLIRSDFIGAFQE-VDLILGPTTPNPAWKLG--EKGDDPVAAYLEDIY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+ N+AG+P +S+PA + +P+G+QL+ F+E L +V Sbjct: 425 TITANLAGIPGLSMPAGFVD-GLPVGVQLLAPYFQESRLLNVAH 467 >gi|291541008|emb|CBL14119.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Roseburia intestinalis XB6B4] Length = 489 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/487 (44%), Positives = 301/487 (61%), Gaps = 12/487 (2%) Query: 4 LNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +N M+++ E R+++K+IS E V + + AIE +N+++ V + A A+E K Sbjct: 5 MNIMSLTAVELGKRIKAKEISVEEAVTAALDAIEKKEKLVNSFVTVDREGALKRAKEVQK 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I +G L G+P+ IKD TK + T S IL F P Y + L GAV+LG Sbjct: 65 QIDDGTLTGPLAGVPVAIKDNMCTKDLLTTCSSKILYNFIPTYTAEAVLNLEKAGAVILG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+ ETS YG +PW + + PGGSSGGS AAVA C ++G+DT Sbjct: 125 KTNMDEFAMGSTTETSAYGETKNPWNT-----EHVPGGSSGGSCAAVAAEECVFALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G + + V D A +L+AIA YD Sbjct: 180 GGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILEAIASYDT 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V D+ RAL + GM +GIP++Y + L P + Q LK GA + Sbjct: 240 KDSTSVKREDYDFTRALVDDVAGMKIGIPRDYFGEGLEPEVKTAVLQAAEELKKKGAIVE 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E + + MY+ +RS GFG EV Sbjct: 300 EFDLSLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTKEYEGLHNMYKKSRSEGFGPEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G++VLSS YD++YL+A + + LIK+ F +AFE+ DVIL P PT+A LG+ Sbjct: 360 KRRIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDKAFEK-YDVILGPAAPTTAPKLGQS 418 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D++T++VN+AGLP IS+P + +P+GLQLIG F E+ + Sbjct: 419 LSDPIKM--YLGDIYTISVNLAGLPGISLPCGKDKNGLPIGLQLIGNCFEEKKIIRAAYA 476 Query: 480 IEKEAGY 486 E+ Y Sbjct: 477 FEQTRTY 483 >gi|315037781|ref|YP_004031349.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus amylovorus GRL 1112] gi|312275914|gb|ADQ58554.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus amylovorus GRL 1112] Length = 479 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/474 (47%), Positives = 310/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A + K L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDDAKPAENLDYSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL G +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGVTFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVAG A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGEMREVIQKQIDTLKDAGAIINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGTEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICNDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQIMAKRFDEGNVFKTADFIERSNKFY 470 >gi|322386764|ref|ZP_08060388.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus cristatus ATCC 51100] gi|321269046|gb|EFX51982.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus cristatus ATCC 51100] Length = 488 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 211/486 (43%), Positives = 305/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E L K+ISAVEL + + I+ + ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHALLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W S PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDSSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R EG + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|313497300|gb|ADR58666.1| GatA [Pseudomonas putida BIRD-1] Length = 483 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 310/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L K S+ EL + + I+ + Q+N++I V A A +D R Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGTLLARIKQLDPQINSFISVTEDLALGQARAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G PI KD F T G+ T S +LD F+ Y++TV KL + G V LGK N Sbjct: 61 AAGETGALLGAPIAHKDLFCTNGVRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGSVKNPWNL-----EHVPGGSSGGSAAAVAARLLPATTGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + PVPDY +L+ S+QG+ +G+PKEY L P I Q + L+ GA + EIS Sbjct: 236 TSIEEPVPDYSASLNASLQGLRIGLPKEYFGAGLDPRIADLVQASVKELEKLGAVVKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEEPKDLTDLYKRSRGEGFGVEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++Y++A++IR LIK DF AF VD+IL PTTP A+ LG + + Sbjct: 356 IMVGTYALSAGYYDAYYVKAQQIRRLIKNDFMAAFND-VDLILGPTTPNPAWKLGAK--S 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 413 SDPVAAYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|289627548|ref|ZP_06460502.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646976|ref|ZP_06478319.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. aesculi str. 2250] gi|330868261|gb|EGH02970.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 483 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----QCVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + L+ GA + E+S Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHDSVKELEKLGAVVQEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + N+ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTND 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|293569135|ref|ZP_06680442.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium E1071] gi|294618095|ref|ZP_06697692.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium E1679] gi|291588182|gb|EFF20023.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium E1071] gi|291595667|gb|EFF26963.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium E1679] Length = 490 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 319/483 (66%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTELHNRSLEELHHMLVSKEITVQDLTKATFERIKETEPEVEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNVLAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DPTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VP++ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPNFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|262038775|ref|ZP_06012129.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Leptotrichia goodfellowii F0264] gi|261747186|gb|EEY34671.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Leptotrichia goodfellowii F0264] Length = 487 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/488 (45%), Positives = 315/488 (64%), Gaps = 14/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA-----E 57 EL SE + ++SK+I++ E+ +++ I ++ A+ V+ +KA +A + Sbjct: 2 ELYKKTASEIAEMIKSKEITSEEVTKHFLERINLLEDKIGAFSSVLEEKALESAKIYDND 61 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++++ N D L G+P+ +KD +KG T A S IL + Y++TV ++L G Sbjct: 62 NNEEKRKNYDNTSLFGVPVALKDNILSKGDLTTASSKILANYEGIYDATVVERLKKAGVP 121 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK NMDEFAMGSSNE S V +PW + PGGSSGGS+AAVA + ++G Sbjct: 122 IVGKANMDEFAMGSSNENSAIKSVSNPWDL-----ERVPGGSSGGSAAAVAAQMIPIALG 176 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPA TGTVGIKPTYGR SR G+++F SLDQ G + ++ D A ++K IAG Sbjct: 177 TDTGGSIRQPACLTGTVGIKPTYGRVSRYGLMAFGSSLDQIGALAKSTEDLARIMKIIAG 236 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 YDE D T ++ VPDY ++++ I+G+ +G+PKEY + L I + + + LK GA Sbjct: 237 YDEKDPTTADVEVPDYLKSINNDIKGLRIGLPKEYFAEGLDKNIKEVVNKAVEQLKGLGA 296 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 +I E+SLP+ +YA+ YYIIS AEA+SNL+RYDGVRYG+R + +MY +RS GFG Sbjct: 297 EIKEVSLPYVEYAISTYYIISSAEAASNLSRYDGVRYGVRKSDDSVEDMYVKSRSEGFGP 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIG YVLSS YD++Y +A ++R LIK DF + VD+ILTPT+PT+AF G Sbjct: 357 EVKRRIMIGNYVLSSGFYDAYYKKASQVRRLIKDDFERVLTE-VDIILTPTSPTAAFKKG 415 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N+ + D++TV++NMAG+PAI VPA + +P+G+QLIG F+E+ LF+ Sbjct: 416 --EKNTDPVQMYLADIYTVSINMAGVPAICVPAGFVD-GLPVGIQLIGNYFKEDLLFNAS 472 Query: 478 QIIEKEAG 485 E+ G Sbjct: 473 HKFEEVRG 480 >gi|229542661|ref|ZP_04431721.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus coagulans 36D1] gi|229327081|gb|EEN92756.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bacillus coagulans 36D1] Length = 485 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 218/480 (45%), Positives = 316/480 (65%), Gaps = 11/480 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE + L +K++ ELVD Q I ++ ++ A++ + ++AR A E D +I + +A Sbjct: 8 ISELHEFLHNKEVKVSELVDEAYQKISETDDKVKAFLTLDEERARKTAAELDGKIGSPEA 67 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+PIGIKD TK + T S IL+ F P Y++TV +KL + +GKLNMDEF Sbjct: 68 ENVLFGMPIGIKDNIVTKDLRTTCASKILENFDPIYDATVMEKLHKEKTITIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW ++D+ PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 128 AMGSSTENSAFQITRNPW-NLDTV----PGGSSGGSAAAVAAGEVPFALGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D D+T + Sbjct: 183 AAFCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRHDSTSAD 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VP+Y AL ++G+ + +PKEY + +S + + L+ GA E+SLPH+ Sbjct: 243 VEVPNYVEALKGDVKGLKIAVPKEYLGEGVSEEARQAVLNALKVLEKLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y + YY+++ +EASSNLAR+DGVRYG R ++ E+Y+ TRS GFG EVK RIM+G Sbjct: 303 KYGVATYYLLASSEASSNLARFDGVRYGYRSPNATNLEELYKKTRSEGFGDEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD++Y +A++ RTLIK+DF + E+ DVI+ PTTPT AF +G++ + +M Sbjct: 363 TFALSAGYYDAYYKKAQQARTLIKKDFDDVLEK-YDVIIGPTTPTPAFKIGEKIEDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ VN+AG+P ISVP +PLGLQ+IG+ F E T++ V E+ + Sbjct: 422 --YANDILTIPVNLAGVPGISVPCGFA-GGLPLGLQIIGKHFDESTVYRVAHAFEQATDF 478 >gi|268319973|ref|YP_003293629.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Lactobacillus johnsonii FI9785] gi|262398348|emb|CAX67362.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Lactobacillus johnsonii FI9785] Length = 479 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/475 (46%), Positives = 313/475 (65%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V ++A+ A ++ + L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDEEAKPAEN------LDFNKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILYNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGETHNPW----NLDK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPDY Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEQEVPDYT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ V +PKEY +D + + + Q+ I LKDAGA + E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRVAVPKEY-MDAVDGEMREVIQKQIDVLKDAGAIVNEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + FE+ DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFEEN-DVIVGPTTTEPAFGIGEEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E +F V IE+ ++ Sbjct: 418 LTISANLAGIPAGSVPAGLVD-GMPAGLQIMAKRFDEGNVFKVADFIERNNKFYE 471 >gi|161507071|ref|YP_001577025.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus helveticus DPC 4571] gi|172048196|sp|A8YTZ6|GATA_LACH4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|160348060|gb|ABX26734.1| Glu-tRNAGln amidotransferase subunit A [Lactobacillus helveticus DPC 4571] Length = 479 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/474 (47%), Positives = 309/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I VV A + K L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVVDDAKPAENLDFSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SH+L + P Y++TV KL GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHMLYNYMPMYDATVISKLKKAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVAG A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGVTHNPW----NLDK-VPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGGDEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ +S + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVSGEMREVIQKQIDALKDAGAIINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R E K +L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAEDTKSLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICNDFDKIFAEN-DVIVGPTTTEPAFDIGSEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|262378968|ref|ZP_06072125.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter radioresistens SH164] gi|262300253|gb|EEY88165.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter radioresistens SH164] Length = 492 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/479 (46%), Positives = 323/479 (67%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L++ S+ EL Y+ IE ++Q+N+Y+ V A++A A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLKTAQFSSRELTQHYLNRIEKIDAQVNSYVTVTAEQALAQADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+A L G+PI KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AAIKTGNATVLTGVPIAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKGKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E S+YG +PW PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSENSFYGATKNPWNL-----SCVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQ G + R+ D A L+ +AG+DE Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDE 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T +N V DY L+ S++ + +GIPK+Y ++D L+ + ++ + L++ GA Sbjct: 236 KDSTSMNQEVDDYVANLNTASVKSLRIGIPKQYFQVDGLNAEVKARVEESLKKLEEMGAI 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPVDLMDLYKRSRSEGFGT 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFEQ VDVI P+ PT+A+ LG Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEQ-VDVIAAPSAPTTAYQLG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ ++ D++T+AVN+AGLPAI+ P ++P+GLQLIG + E L SV Sbjct: 415 AAQD---TVAMYLGDIYTLAVNLAGLPAINAPIGFDANQLPVGLQLIGNYWSESQLLSV 470 >gi|16803795|ref|NP_465280.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes EGD-e] gi|47095681|ref|ZP_00233288.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Listeria monocytogenes str. 1/2a F6854] gi|224499526|ref|ZP_03667875.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes Finland 1988] gi|224503319|ref|ZP_03671626.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes FSL R2-561] gi|254829492|ref|ZP_05234179.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL N3-165] gi|254900740|ref|ZP_05260664.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes J0161] gi|254913775|ref|ZP_05263787.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes J2818] gi|254938162|ref|ZP_05269859.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes F6900] gi|20454916|sp|Q8Y6D2|GATA_LISMO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|16411209|emb|CAC99833.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria monocytogenes EGD-e] gi|47015966|gb|EAL06892.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Listeria monocytogenes str. 1/2a F6854] gi|258601907|gb|EEW15232.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL N3-165] gi|258610775|gb|EEW23383.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes F6900] gi|293591791|gb|EFG00126.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes J2818] Length = 483 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLAEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFINVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP + +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|118444948|ref|YP_878902.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium novyi NT] gi|166217664|sp|A0Q2Q0|GATA_CLONN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118135404|gb|ABK62448.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium novyi NT] Length = 485 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/461 (45%), Positives = 297/461 (64%), Gaps = 11/461 (2%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIH 88 YI E + ++ AY+ + + A A+ D++I G+ + L G+P+GIKD + G+ Sbjct: 29 YIARTECIDEKIGAYLYLSKESALKEAKLLDEKIQRGEKLKGLWGVPVGIKDNISVSGMQ 88 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 S IL+ + Y++TV +L +N ++LGKLNMDEFAMGSSNE S + V +PW Sbjct: 89 NTCASKILENYISPYDATVISRLKENNGIILGKLNMDEFAMGSSNENSAFKIVRNPWDL- 147 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 + PGGSSGGS+AAVA S+G++TGGS+RQPA+ G VG+KPTYGR SR G+ Sbjct: 148 ----ERIPGGSSGGSTAAVASREIPLSLGSETGGSVRQPAALCGVVGLKPTYGRISRYGV 203 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 ISFA +LDQ G I R V D AIL + I+G+D+ D+T + VP+Y+ +L + + G+ +G+ Sbjct: 204 ISFASTLDQVGTIGRDVTDCAILTEVISGFDKRDSTSARVAVPNYKESLKKDLTGIRIGL 263 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 PKE+ + L +I K + I L+ GA+I SLP +Y+L AYYIIS AEASSNLAR Sbjct: 264 PKEFFKEDLDESIRKQIEDAIKILEKNGAEIKICSLPLAEYSLSAYYIISTAEASSNLAR 323 Query: 329 YDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 DG+RYG R+ D E +Y +R+ GFG+EVK RIM+GTYVLS CY+ +Y +A K+RT Sbjct: 324 IDGIRYGRRINTLDKHEDIYIQSRNEGFGEEVKKRIMLGTYVLSKGCYEKYYEKALKVRT 383 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 LIK DF ++ VD I+TPT+ +AF G+ SM +D +TV ++AGLPAIS Sbjct: 384 LIKEDFKRVLKE-VDAIITPTSKVTAFKFGERTKEVLSMYS--SDEYTVPASIAGLPAIS 440 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +P K +P+G QLIG FRE+ LF++G E+ + + Sbjct: 441 IPCGFS-KGLPVGFQLIGDYFREDILFNIGYSYEQSTDFHK 480 >gi|33862921|ref|NP_894481.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prochlorococcus marinus str. MIT 9313] gi|39931400|sp|Q7V7T6|GATA_PROMM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33634838|emb|CAE20823.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus str. MIT 9313] Length = 486 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/487 (46%), Positives = 316/487 (64%), Gaps = 11/487 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 MA++E R +L+ ++SA EL D + I + ++A++++ A +ARA A+ D+ + G Sbjct: 1 MAIAEWRQQLKLGEVSARELTDHQLARIAVVDPTLHAFLDITADRARADADRIDEALAAG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++ L G+P+ IKD TKGI T S +L+ F P YESTVT++LW GAV+LGK N+D Sbjct: 61 ESLPPLAGVPLAIKDNLCTKGIRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+AAVA C A++G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGATSNPWDI-----SRVPGGSSGGSAAAVAAGECMAALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G T V D+A LL+ IAG D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N+ VPDY AL Q + G+ +G+ +E + + L + +T L+ GA++VE+S Sbjct: 236 LNVAVPDYCSALSQPMSGVRIGLIRECFDQNGLDAQVKRTVLTAAEKLQSLGAELVEVSC 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R EG D L M +R+ GFG EV+ RI Sbjct: 296 PRFSDGIATYYVIAPSEASANLARYDGVKYGYRAEGADALAAMTARSRAEGFGSEVQRRI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI++DF AF Q VDV+LTPT+PT+AF G ++ Sbjct: 356 LIGTYALSAGYMDAYYKKAQQVRTLIRQDFDAAF-QTVDVLLTPTSPTTAFKAGAHADDP 414 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ N+AGLPAIS+P + +P+G+QLI E L V E+ Sbjct: 415 LAM--YLADLLTIPANLAGLPAISLPCGFDDDGLPIGVQLIANVLEESRLLQVAFHYEQA 472 Query: 484 AGYFRPH 490 A H Sbjct: 473 ANVMANH 479 >gi|116873188|ref|YP_849969.1| glutamyl-tRNA(Gln) amidotransferase; subunit A [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458533|sp|A0AJK8|GATA_LISW6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116742066|emb|CAK21190.1| glutamyl-tRNA(Gln) amidotransferase; subunit A [Listeria welshimeri serovar 6b str. SLCC5334] Length = 483 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 309/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIESVEDKVGSFITLNKEAAFDVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDNLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y+ TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNAHTLEELYKKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE+ DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEK-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP E +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSE-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|302542304|ref|ZP_07294646.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces hygroscopicus ATCC 53653] gi|302459922|gb|EFL23015.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces himastatinicus ATCC 53653] Length = 497 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 323/487 (66%), Gaps = 14/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E ++ S +++AVE+ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDLIRLTAAEIAAKVASGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F TKGI T S IL+G+ P Y++TVTQ+L D ++L Sbjct: 61 EKRARGEELGPLAGVPLALKDIFTTKGIPTTVGSKILEGWIPPYDATVTQRLRDADVIVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSA++A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSASLASFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S++GM VG+ KE+ + + + +++ + L++ GA+ Sbjct: 236 PLDSTSIDAPVPAVVEAARNGSVRGMRVGVVKEFAGEGYQAGVMQRFEESVELLRELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGF 355 IVEIS P AL AYY+I+P+E SSNLAR+D +RYGLR K E+ TR+ GF Sbjct: 296 IVEISCPSFDKALAAYYLIAPSECSSNLARFDAMRYGLRAGDDGSKSAEEVTALTRAEGF 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIM+GTY LSS YD++Y A+K+RTLI RDF +AFEQ VDV+++PTTPT+AFP Sbjct: 356 GAEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFEKAFEQ-VDVLVSPTTPTTAFP 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +E L+ Sbjct: 415 IGERADD--PMAMYLADLCTIPANLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMADERLY 472 Query: 475 SVGQIIE 481 VG +E Sbjct: 473 RVGAAVE 479 >gi|46907985|ref|YP_014374.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes serotype 4b str. F2365] gi|254826000|ref|ZP_05231001.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL J1-194] gi|254853665|ref|ZP_05243013.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes FSL R2-503] gi|254932799|ref|ZP_05266158.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes HPB2262] gi|254992260|ref|ZP_05274450.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes FSL J2-064] gi|255521022|ref|ZP_05388259.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes FSL J1-175] gi|300765951|ref|ZP_07075923.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes FSL N1-017] gi|67460867|sp|Q71YR3|GATA_LISMF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|46881255|gb|AAT04551.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Listeria monocytogenes serotype 4b str. F2365] gi|258607044|gb|EEW19652.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes FSL R2-503] gi|293584352|gb|EFF96384.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes HPB2262] gi|293595239|gb|EFG03000.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL J1-194] gi|300513337|gb|EFK40412.1| glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes FSL N1-017] gi|328473897|gb|EGF44719.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes 220] gi|332312195|gb|EGJ25290.1| Glutamyl-tRNA(Gln) amidotransferase [Listeria monocytogenes str. Scott A] Length = 483 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LSGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP + +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|254832500|ref|ZP_05237155.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes 10403S] Length = 483 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNVQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLAEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFINVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP + +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|146329478|ref|YP_001209858.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dichelobacter nodosus VCS1703A] gi|166217668|sp|A5EY31|GATA_DICNV RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|146232948|gb|ABQ13926.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dichelobacter nodosus VCS1703A] Length = 487 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/490 (46%), Positives = 320/490 (65%), Gaps = 12/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+ V+E L +K +S+VEL ++ I+ N ++NAYI A +A A A+ SD Sbjct: 1 MSDLHHKTVAELATLLHNKTLSSVELTQHFLSRIQQYNPKLNAYICTTADRALADAKASD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G A L+GIP+G KD F TKGI T A S +L+ F P Y +TV +L G+V+ Sbjct: 61 ERRQKGAAHSPLDGIPMGHKDLFCTKGIATTAGSKMLERFIPSYTATVVARLEAAGSVLT 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL+MDEFAMGSSNE SY+G V +PW ++ PGGSSGGS+AAVA L + G+D Sbjct: 121 GKLSMDEFAMGSSNERSYFGAVYNPW-----DEQRIPGGSSGGSAAAVAARLIPYATGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPA++ G GIKPTYG CSR G+I++A SLDQAG++ +T +D A++L +AG+D Sbjct: 176 TGGSVRQPAAYCGITGIKPTYGTCSRWGMIAYASSLDQAGVLAKTAQDCALILNEMAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + ++ L++ + G+T+G+P Y L L I + QQ + + GA I Sbjct: 236 PKDSTSNPKALTQFDHELNRDLDGITIGLPSNY-LAGLDAKIAEKLQQTAALYEKLGATI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 EI+L T A+ +YY+IS AEASSNL R+DGV YG R KD+ ++YE +RS GFG E Sbjct: 295 KEITLSATDVAIASYYLISSAEASSNLERFDGVHYGYRCANPKDLSDLYERSRSEGFGAE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTY LS+ YD++Y +AR+ R I F +AF++ DVIL PTTPT+A+PLG Sbjct: 355 VKRRIMIGTYALSAGYYDAYYEQARRGRRAILNSFLQAFKE-CDVILGPTTPTTAYPLGS 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ +M D++TV+ N+AGLPA+S PA + +P+G QLIG F E L ++ Sbjct: 414 KVDDPVAM--FLGDLYTVSANLAGLPALSHPAGFID-GLPVGCQLIGAHFSEPQLLNLAH 470 Query: 479 IIEKEAGYFR 488 ++E + + Sbjct: 471 RFQQETDFHQ 480 >gi|329119743|ref|ZP_08248422.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria bacilliformis ATCC BAA-1200] gi|327464138|gb|EGF10444.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria bacilliformis ATCC BAA-1200] Length = 482 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 229/467 (49%), Positives = 304/467 (65%), Gaps = 10/467 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK ISAVEL Y++AI N +NAYI + +K A A +D RI G A L G+P Sbjct: 13 LQSKQISAVELAGEYLKAIAAHNPALNAYITLDEEKTLAEARAADARIAAGSATALTGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F G + S +LD F Y +TV Q L D G V LG++NMDEFAMGS NE Sbjct: 73 IAYKDIFCQTGWRSACASKMLDNFVSPYTATVVQNLLDEGMVTLGRVNMDEFAMGSCNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SYYG +PW + PGGSSGGS+AAVA L A++G+DTGGSIRQPAS G G Sbjct: 133 SYYGATRNPWNT-----AHVPGGSSGGSAAAVAARLAPAALGSDTGGSIRQPASHCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I++A SLDQAG + +T D AILL IAG+DE D+T + DY R Sbjct: 188 LKPTYGTVSRFGMIAYASSLDQAGPMAQTAEDCAILLNTIAGFDERDSTSIERAKEDYTR 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ ++G+ +G+PKEY D + Q I+ L++ GA+ VE+SLP T ++PAYY Sbjct: 248 DLNRPLKGLRIGLPKEYFADGADEGVQAALQNTIALLREQGAQTVEVSLPQTALSIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ AEAS+NL+RYDGVRYG R + ++ EMY +R+ GFG EVK RIMIGTYVLS Sbjct: 308 VIASAEASTNLSRYDGVRYGHRAAQFANLDEMYSRSRAEGFGSEVKRRIMIGTYVLSHGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R L+ +DF AFEQ D+IL P PT+A +G ++S + +D++ Sbjct: 368 YDAYYLKAQKLRRLVAQDFQTAFEQ-CDLILAPAAPTAAPIIG---SSSDPVQTYLSDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+AVN+AGLPA+S+PA +P+G QLIG F E L I+ Sbjct: 424 TIAVNLAGLPALSLPAGFAANSLPIGAQLIGNHFTEARLLGAAHQIQ 470 >gi|238926773|ref|ZP_04658533.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Selenomonas flueggei ATCC 43531] gi|238885305|gb|EEQ48943.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Selenomonas flueggei ATCC 43531] Length = 475 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/468 (46%), Positives = 304/468 (64%), Gaps = 10/468 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L +ISA EL + + ++ + AY+ + A A A+ D + G+ L GI Sbjct: 2 LARSEISARELTEDVLSRMDAVEGDVGAYLLETREGALAQADAVDAKRAAGEKIPFLAGI 61 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD T G+ T A S IL+ F P Y++TV KL AV+LGK N+DEFAMG S E Sbjct: 62 PGAVKDNICTIGVRTTAASKILENFVPPYDATVMTKLHAEDAVILGKTNLDEFAMGGSTE 121 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPASF G V Sbjct: 122 NSAFQPTHNPWDTAR-----VPGGSSGGSAAAVASGTAIWALGSDTGGSIRQPASFCGIV 176 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G++++A SLDQ G +TR V D+A LL IAG+D D+T VPDY Sbjct: 177 GLKPTYGRVSRYGLMAYASSLDQIGPLTRDVTDAAHLLNVIAGHDPMDSTASRANVPDYT 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL ++G+ +G+PKEY +D + ++ + ++ I+ ++ GA++ EISLPHT YA+ Y Sbjct: 237 QALRADVKGLKIGLPKEYFIDGMDQEVEASVRKAIADMEAMGAEVREISLPHTDYAVSTY 296 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 Y+I+PAEA++NL RYDGV YG+RV+G+D+++M TR+ FG EVK RI+IG Y LS+ Sbjct: 297 YLIAPAEAATNLERYDGVSYGVRVDGEDLVDMMTRTRTEKFGAEVKRRILIGNYALSAGY 356 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A K+RTLI++DF AFE+ VDVI+TPT PT A+ +G+ + + D+ Sbjct: 357 YDAYYLKALKVRTLIQQDFMRAFEE-VDVIMTPTAPTPAYKIGE---MTSPLQMYLQDIS 412 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 TV +N+AGLP ISVP +P+GLQ+IG+P EET+ E+ Sbjct: 413 TVPLNLAGLPGISVPCGFTAAGLPIGLQIIGRPLAEETILRAAYAYEQ 460 >gi|330506575|ref|YP_004383003.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanosaeta concilii GP-6] gi|328927383|gb|AEB67185.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanosaeta concilii GP-6] Length = 472 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 220/469 (46%), Positives = 303/469 (64%), Gaps = 22/469 (4%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 SA E + + IE ++NA+ + + A A+ D+ N L G+PI IK+C Sbjct: 13 SAEEYLSQLYERIERG--KLNAFTTLARETALREAKSFDQ---NPGKGLLAGVPIAIKEC 67 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 +TKGI + S IL G+ P Y++ V ++L GA+++GK NMDEFAMG+S ETS +GP Sbjct: 68 ISTKGIESNCSSRILQGYIPPYDAHVIERLRAEGAIIMGKTNMDEFAMGTSTETSAFGPT 127 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +PW +D PGGSSGGS+A VAG S+G+DTGGS+R PASF G VG+KPTYG Sbjct: 128 RNPW-DIDCV----PGGSSGGSAACVAGGEAPCSLGSDTGGSVRCPASFCGIVGLKPTYG 182 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP--VPDYERALDQ 259 SR G+I++A SL+Q G +TRTV+D+A+LL+ IAG+D D+T +PD LD+ Sbjct: 183 LVSRYGLIAYANSLEQIGPLTRTVKDTALLLEVIAGHDWRDSTSAEKSSYLPD----LDR 238 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 I GM +GIPKEY + ++ ++K+ IS L+ GA E+SLPHTQYAL AYY+I+ Sbjct: 239 GIYGMKIGIPKEYFGEGVNEKVEKSVWDAISVLEGLGASWQEVSLPHTQYALAAYYVIAM 298 Query: 320 AEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 +EASSNLAR+DG+RYGLR G +D + RS GFG EVK RI++GTY LS+ Y Sbjct: 299 SEASSNLARFDGLRYGLRQAGEDRDWHTTFSEIRSKGFGPEVKRRILLGTYALSAGYYGR 358 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +YL+A K+RTLIK DF +AF+Q VD++ +PT P AF +G+ N+ S+ D+FTV Sbjct: 359 YYLKALKVRTLIKEDFLQAFKQ-VDLLASPTMPIPAFRIGERINDPLSL--YKADIFTVP 415 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +N+AG+PAIS+P ++P+GLQLIG F E + Q E Y Sbjct: 416 INLAGVPAISLPCGFA-GQLPIGLQLIGPHFGEAAVLQAAQAFEAATPY 463 >gi|116491662|ref|YP_811206.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Oenococcus oeni PSU-1] gi|290891275|ref|ZP_06554337.1| hypothetical protein AWRIB429_1727 [Oenococcus oeni AWRIB429] gi|122276156|sp|Q04DD1|GATA_OENOB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116092387|gb|ABJ57541.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Oenococcus oeni PSU-1] gi|290479239|gb|EFD87901.1| hypothetical protein AWRIB429_1727 [Oenococcus oeni AWRIB429] Length = 487 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 215/478 (44%), Positives = 311/478 (65%), Gaps = 12/478 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L K+ISA EL + ++S S++NA+I + + A A E D I+ D L GI Sbjct: 15 KLVDKEISATELTKEALNKSKSSQSEINAFITIDDEGALKRAAEIDAVGIDPD-NILSGI 73 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P IKD TKG+ T A SHILD F P Y++TV +KL + G V +GK NMDEFAMG S E Sbjct: 74 PFAIKDNIVTKGLKTTAASHILDNFVPVYDATVIEKLNELGIVTIGKTNMDEFAMGGSTE 133 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TSY+G + W D T PGGSSGGS+++VA + ++G+DTGGSIRQPA+F G V Sbjct: 134 TSYFGKTANAW---DHTK--VPGGSSGGSASSVASGVIPVALGSDTGGSIRQPAAFNGIV 188 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV D+A +L AI+G D+ D T + VPD+ Sbjct: 189 GLKPTYGRVSRWGLIAFGSSLDQIGPLTRTVEDNARVLAAISGKDQRDTTTEDQSVPDFT 248 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + + ++ + +G+PKEY + + ++ I+ + GAK+ E+SLPH++Y + AY Sbjct: 249 KGIKKGVKDLRIGVPKEYFAKGIDEGVKDVVKKAIAKYESLGAKVDEVSLPHSKYGIAAY 308 Query: 315 YIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YI++ +EASSNL R+DG+RYG R +G+ + ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 309 YILASSEASSNLERFDGIRYGFSARQDGQTLEDLYVRTRSEGFGDEVKRRIMLGTFALSA 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++ +A ++RTLI DF + FE D+IL PTT + AF LG E ++ M ND Sbjct: 369 GFYDAYFKKAAQVRTLIVNDFAKVFENH-DIILGPTTTSPAFDLGSENDDPVKM--YMND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 + T+ +N+AGLP +S+ A + +P+GLQ+IG+ F E T++ E+++ F H Sbjct: 426 LLTIPLNLAGLPGMSINAGFTD-GLPVGLQIIGKRFDESTIYKTAYAFEQDSQLFTKH 482 >gi|238923549|ref|YP_002937065.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Eubacterium rectale ATCC 33656] gi|259647215|sp|C4ZHB9|GATA_EUBR3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|238875224|gb|ACR74931.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Eubacterium rectale ATCC 33656] Length = 503 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 212/484 (43%), Positives = 303/484 (62%), Gaps = 11/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ AV E ++++K+++ E V + I +I+ ++N+++ + + A A E Sbjct: 1 MDLMSLTAV-ELGKKIQAKEVTVEEAVKAAIASIKAKEEKINSFVTIDEEGALKKAAEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +I G+ + L G+P+ IKD T+G+ T S IL F P Y + ++L D G V++ Sbjct: 60 AKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKILYNFIPTYTAEAVKRLEDAGCVIV 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +G +PW + + PGGSSGGS AAVA ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGATKNPWNT-----EHVPGGSSGGSCAAVAAEEVPFALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G I + V D AI+L+AIA YD Sbjct: 175 TGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCAIILEAIASYD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T VN + AL ++GM +GIPK+Y D L P + LK GA + Sbjct: 235 TKDSTSVNRDDLKFTEALVDDVKGMKIGIPKDYLGDGLDPEVKSAILAAADELKKKGAVV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E D+ MY+ +RS GFG E Sbjct: 295 EEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTKEYTDLHNMYKKSRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A +++ LIK+ F +AF + DVIL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRVKALIKKAFDDAFAK-YDVILGPAAPTTAPKLG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E+ S + D++T++VN+AGLP IS+P + + +P+GLQLIG F+E+ + Sbjct: 413 -ESLSDPIQMYLGDIYTISVNLAGLPGISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAY 471 Query: 479 IIEK 482 EK Sbjct: 472 SFEK 475 >gi|217964097|ref|YP_002349775.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Listeria monocytogenes HCC23] gi|290893411|ref|ZP_06556396.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL J2-071] gi|254790394|sp|B8DFG8|GATA_LISMH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|217333367|gb|ACK39161.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Listeria monocytogenes HCC23] gi|290557062|gb|EFD90591.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL J2-071] gi|307571335|emb|CAR84514.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Listeria monocytogenes L99] gi|313608264|gb|EFR84268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria monocytogenes FSL F2-208] Length = 483 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+IS +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKSLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP + +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|292670867|ref|ZP_06604293.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Selenomonas noxia ATCC 43541] gi|292647488|gb|EFF65460.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Selenomonas noxia ATCC 43541] Length = 475 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/468 (46%), Positives = 303/468 (64%), Gaps = 10/468 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGI 74 L K+ISA EL + + ++ AY+ A A A+ D +I G+ + L GI Sbjct: 2 LTRKEISAHELTEDVFARMNAVEGEVGAYLLETRDTALAEADRVDAKIAAGEEIQFLAGI 61 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD TKGI T A S IL+ F P Y++TV KL + AV++GK N+DEFAMG S E Sbjct: 62 PGAVKDNICTKGIRTTAGSKILEKFVPPYDATVMCKLNASDAVIIGKANLDEFAMGGSTE 121 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPASF G V Sbjct: 122 NSAFHPTRNPWDV-----ERVPGGSSGGSAAAVASGTAVWALGSDTGGSIRQPASFCGIV 176 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G++++A SLDQ G +TR V D+A ++ IAG+D D+T VPDY Sbjct: 177 GLKPTYGRVSRYGLMAYASSLDQIGPLTRNVTDAAHIMNIIAGHDVMDSTASKAAVPDYT 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 AL ++G+ +G+PKEY + + ++ ++ I + GA++ EISLPHT YA+ Y Sbjct: 237 AALRGDVKGLKIGMPKEYFVAGMDSEVEAAIRKAIEDFETMGAEVREISLPHTDYAVSTY 296 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 Y+I+PAEA++NL RYDGV YG RV+G+D+++M TR+ FG EVK RI+IG Y LS+ Sbjct: 297 YLIAPAEAATNLERYDGVSYGARVDGEDLVDMMTRTRTEKFGAEVKRRILIGNYALSAGY 356 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A K+RTLI+RDF +AFE VD+I+TPT PT+A+ +G+ + + D+ Sbjct: 357 YDAYYLKALKVRTLIQRDFMQAFED-VDIIMTPTAPTAAYKIGE---MTSPLQMYLQDIS 412 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 TV VN+AGLP IS+P +P+GLQ+IG+P EET+ S E+ Sbjct: 413 TVPVNLAGLPGISIPCGFTSSGLPIGLQIIGRPLAEETILSAAYAYEQ 460 >gi|313618393|gb|EFR90419.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria innocua FSL S4-378] Length = 483 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIEAVEDKVGSFITLNKETALGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S ILD F P Y++TV KL + + +GKLNMDE Sbjct: 66 N-NILAGLPIGIKDNIVTKNLRTTAASKILDNFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF + F + DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVDVF-KNYDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP E +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSE-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|329667839|gb|AEB93787.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus johnsonii DPC 6026] Length = 479 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/475 (46%), Positives = 313/475 (65%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V ++A+ A ++ + L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDEEAKPAEN------LDFNKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILYNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGETHNPW----NLDK-VPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPDY Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEKEVPDYT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ V +PKEY +D + + + Q+ I LK+AGA I E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRVAVPKEY-MDAVDGEMREVIQKQIDVLKNAGAIINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + FE+ DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFEEN-DVIVGPTTTEPAFGIGEEISDPIKMYN--NDL 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E +F V IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPAGLQIMAKRFDEGNVFKVADFIERNNKFYE 471 >gi|315282733|ref|ZP_07871073.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria marthii FSL S4-120] gi|313613620|gb|EFR87424.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria marthii FSL S4-120] Length = 483 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE+ ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVSESFNRIESVEDKVGSFITLNKEAAFGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKSLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLAEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP + +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|313623347|gb|EFR93574.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria innocua FSL J1-023] Length = 483 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIEAVEDKVGSFITLNKETALGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSNSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF + F + DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVDVF-KNYDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP E +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSE-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|118586786|ref|ZP_01544222.1| Glu-tRNA amidotransferase, A subunit [Oenococcus oeni ATCC BAA-1163] gi|118432779|gb|EAV39509.1| Glu-tRNA amidotransferase, A subunit [Oenococcus oeni ATCC BAA-1163] Length = 521 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/478 (45%), Positives = 311/478 (65%), Gaps = 12/478 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L K+ISA EL + ++S S++NA+I + + A A E D I+ D L GI Sbjct: 49 KLVDKEISATELTKEALNKSKSSQSEINAFITIDDEGALKRAAEIDAVGIDPD-NILSGI 107 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P IKD TKG+ T A SHILD F P Y++TV +KL + G V +GK NMDEFAMG S E Sbjct: 108 PFAIKDNIVTKGLKTTAASHILDNFVPVYDATVIEKLNELGIVTIGKTNMDEFAMGGSTE 167 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TSY+G + W D T PGGSSGGS+++VA + ++G+DTGGSIRQPA+F G V Sbjct: 168 TSYFGKTANAW---DHTK--VPGGSSGGSASSVASGVVPVALGSDTGGSIRQPAAFNGIV 222 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G +TRTV D+A +L AI+G D+ D T + VPD+ Sbjct: 223 GLKPTYGRVSRWGLIAFGSSLDQIGPLTRTVEDNARVLAAISGKDQRDTTTEDQSVPDFT 282 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + + ++ + +GIPKEY + + ++ I+ + GAK+ E+SLPH++Y + AY Sbjct: 283 KGIKKGVKDLRIGIPKEYFAKGIDEGVKDVVKKAIAKYESLGAKVDEVSLPHSKYGIAAY 342 Query: 315 YIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YI++ +EASSNL R+DG+RYG R +G+ + ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 343 YILASSEASSNLERFDGIRYGFSARQDGQTLEDLYVRTRSEGFGDEVKRRIMLGTFALSA 402 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++ +A ++RTLI DF + FE D+IL PTT + AF LG E ++ M ND Sbjct: 403 GFYDAYFKKAAQVRTLIVNDFAKVFENH-DIILGPTTTSPAFDLGSENDDPVKM--YMND 459 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 + T+ +N+AGLP +S+ A + +P+GLQ+IG+ F E T++ E+++ F H Sbjct: 460 LLTIPLNLAGLPGMSINAGFTD-GLPVGLQIIGKRFDESTIYKTAYAFEQDSQLFTKH 516 >gi|295702480|ref|YP_003595555.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A [Bacillus megaterium DSM 319] gi|294800139|gb|ADF37205.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Bacillus megaterium DSM 319] Length = 485 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/476 (46%), Positives = 313/476 (65%), Gaps = 11/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE L K++ ELVD + I + ++ A++ + ARA A+E D+ + D Sbjct: 8 LSELHSLLHKKEVRVQELVDESYKRINEVDDKVGAFLALNEDNARAYAKELDEALQTKDE 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD TK + T S IL F P Y++TV QKL AV +GKLNMDEF Sbjct: 68 FGLLFGMPIGVKDNIVTKDLRTTCSSKILANFDPIYDATVVQKLQAAEAVTIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 128 AMGSSTENSGLQLTRNPW-NLD----YVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G IT +V D+A LL+AI+G D D+T N Sbjct: 183 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITNSVEDNAYLLQAISGVDPMDSTSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPDY AL ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 243 VDVPDYVSALTGDVKGLKIAVPKEYLGEGVGEEARQSVLDALKVLEGLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG R + ++++EMY+ +RS GFG EVK RIM+G Sbjct: 303 KYALATYYLLSSSEASANLSRFDGVRYGYRTDNAENLIEMYKQSRSEGFGNEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK+DF FE DVI+ PTTPT +F +G++ ++ +M Sbjct: 363 TFALSSGYYDAYYKKAQQVRTLIKQDFESVFEN-YDVIIGPTTPTPSFKIGEKTDDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+P ISVP L +PLGLQ+IG+ F E T++ V E+ Sbjct: 422 --YANDILTIPVNLAGVPGISVPCGLS-NGLPLGLQIIGKHFDESTIYRVAHAFEQ 474 >gi|291536652|emb|CBL09764.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Roseburia intestinalis M50/1] Length = 489 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/487 (44%), Positives = 301/487 (61%), Gaps = 12/487 (2%) Query: 4 LNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +N M+++ E R+++K+IS E V + + AIE +N+++ V + A A+E K Sbjct: 5 MNIMSLTAVELGKRIKAKEISVEEAVTAALDAIEKKEKLVNSFVTVDREGALKRAKEVQK 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I +G L G+P+ IKD TK + T S IL F P Y + L GAV+LG Sbjct: 65 QIDDGTLTGPLAGVPVAIKDNMCTKDLLTTCSSKILYNFIPTYTAEAVLNLEKAGAVILG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+ ETS YG +PW + + PGGSSGGS AAVA C ++G+DT Sbjct: 125 KTNMDEFAMGSTTETSAYGETKNPWNT-----EHVPGGSSGGSCAAVAAEECVFALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G + + V D A +L+AIA YD Sbjct: 180 GGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILEAIASYDT 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V D+ +AL + GM +GIP++Y + L P + Q LK GA + Sbjct: 240 KDSTSVKREDYDFTKALVDDVAGMKIGIPRDYFGEGLEPEVKTAVLQAAEELKKKGAIVE 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E + + MY+ +RS GFG EV Sbjct: 300 EFDLSLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTKEYEGLHNMYKKSRSEGFGPEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G++VLSS YD++YL+A + + LIK+ F +AFE+ DVIL P PT+A LG+ Sbjct: 360 KRRIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDKAFEK-YDVILGPAAPTTAPKLGQS 418 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D++T++VN+AGLP IS+P + +P+GLQLIG F E+ + Sbjct: 419 LSDPIKM--YLGDIYTISVNLAGLPGISLPCGKDKNGLPIGLQLIGNCFEEKKIIRAAYA 476 Query: 480 IEKEAGY 486 E+ Y Sbjct: 477 FEQTRTY 483 >gi|294054939|ref|YP_003548597.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Coraliomargarita akajimensis DSM 45221] gi|293614272|gb|ADE54427.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Coraliomargarita akajimensis DSM 45221] Length = 488 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/492 (44%), Positives = 317/492 (64%), Gaps = 17/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+F ++E L + + ++V + + I + ++ A++ A+ A A A+ SD Sbjct: 1 MSDLHFKTIAELAAMLAAGETTSVAITQAVIDRTAAVDDKVKAFLSSDAEDALAQAKASD 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G A L +GIP+GIKD A K + S +L+ + +++T KL + GAV+ Sbjct: 61 ERRAAGKALGLLDGIPVGIKDTLAVKDQPLRCASKMLENYVSPFDATCIAKLREAGAVIY 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+LNMDEFAMGSS E S Y +PW + PGGSSGGS+AA+A A++GTD Sbjct: 121 GRLNMDEFAMGSSTENSAYQTTANPWDL-----ETIPGGSSGGSAAAMAAGEAIATLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G VG+KPTYG SR G+++FA SLDQ G RTV D+AIL++A+ G D Sbjct: 176 TGGSIRQPAALCGVVGMKPTYGLISRYGLVAFASSLDQVGPFARTVEDAAILMEAMLGKD 235 Query: 240 ECDATCVNLPVP----DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P +Y L + +G+P+E+ + + P + +Q I W K Sbjct: 236 DLDSTSI---APQGETNYAELLKEKKGPWKLGVPREFFGEGIDPEVKANIEQAIDWYKSQ 292 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIG 354 G +IV+ISLPH+ A+P YYI++ AEASSNLAR+DGVRY R E D L ++ +R G Sbjct: 293 GCEIVDISLPHSDLAVPVYYIVATAEASSNLARFDGVRYSHRSPEANDALSLFTKSRGEG 352 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTYVLSS YD++YLRA+K+RTLI++DF +AFEQ VD ILTPT+PT AF Sbjct: 353 FGDEVKRRIILGTYVLSSGYYDAYYLRAQKVRTLIRQDFEQAFEQ-VDAILTPTSPTPAF 411 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G+ ++ +M +D++T++VN+AGLPAISVP+ E +P+GLQ+IG+ F E +F Sbjct: 412 KRGERSDDPLAM--YLSDIYTISVNLAGLPAISVPSGFTESGLPIGLQVIGKAFGEADMF 469 Query: 475 SVGQIIEKEAGY 486 +V E+ Y Sbjct: 470 AVAHAFEQAHDY 481 >gi|309803822|ref|ZP_07697907.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 11V1-d] gi|312870778|ref|ZP_07730884.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 3008A-a] gi|312873074|ref|ZP_07733133.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 2062A-h1] gi|308164056|gb|EFO66318.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 11V1-d] gi|311091307|gb|EFQ49692.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 2062A-h1] gi|311093654|gb|EFQ51992.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 3008A-a] Length = 479 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 209/474 (44%), Positives = 302/474 (63%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++K+I+A +L + I+ ++NA I V+ AE D + +L GI Sbjct: 14 KLKNKEITAEQLTQDTLAKIKELEPKLNAMITVIDDAK--PAENLDF------SNELAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T + T A SHIL + P Y++TV KL ++GK NMDEFAMGSS+E Sbjct: 66 PIAVKDNIITNNVKTTAASHILYNYMPVYDATVVSKLKAAKMTIIGKTNMDEFAMGSSSE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW T + G ++ + V A++GTDTGGSIRQPA+F G Sbjct: 126 NSYFGAPKNPWDLTKVTGGSSGGSAAAVAGGEVI-----AALGTDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L ++G D+ DAT VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVQDSAKILNVLSGADDHDATVSEREVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL+Q ++G+ V +P+EY + +S + ++ I LKD GA I ++SLPHT+Y +P Y Sbjct: 241 KALNQDVKGLRVAVPEEYFGEGISEKVKALIKEQIKVLKDHGAIINKVSLPHTKYVIPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRFDGIRYGYRSKDAKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI RDF + FE+ DVI+ PTTPT AF L + + M ND+ Sbjct: 361 SYDRFFRQAAKVRTLICRDFEKIFEEN-DVIVGPTTPTPAFGLNSKTKDPLEM--YANDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T+A N+AG+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTIAANLAGVPAASVPAGLVD-GMPVGLQIMAKRFDEESIFRVADFIERSNKFY 470 >gi|284049093|ref|YP_003399432.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidaminococcus fermentans DSM 20731] gi|283953314|gb|ADB48117.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidaminococcus fermentans DSM 20731] Length = 488 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/480 (45%), Positives = 304/480 (63%), Gaps = 12/480 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-R 69 E D+L K+IS+VEL + I+ Q+ AYI + + A A A + DK I +G+ + Sbjct: 10 ELHDKLVKKEISSVELTKAVYDRIDEVEDQVKAYITLDKENALAQAAKVDKMIADGETIK 69 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP IKD + KG+ S IL+ F P Y++ V + L + + LGK NMDEFAM Sbjct: 70 PLAGIPGAIKDNISVKGVRMTCASKILENFVPVYDAHVIENLRKDETIFLGKTNMDEFAM 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ ETS++ +PW PGGSSGGS+A++A S+G+DTGGSIRQPA Sbjct: 130 GSTTETSHFQITHNPWDL-----SRVPGGSSGGSAASIAAGEAIWSLGSDTGGSIRQPAF 184 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYGR SR G ++FA SLDQ G I R V D+A++L I+G D D+T + P Sbjct: 185 FNGCVGLKPTYGRVSRYGCVAFASSLDQVGPIARDVTDAALVLNTISGLDAHDSTSYDAP 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VPDY +AL Q ++ +T+G+PKEY + P + + ++ GA ++E+SLPHT+Y Sbjct: 245 VPDYTKALRQDVKDLTIGLPKEYFGEGTDPKVAAQIKLAAKKFEELGAHVIEVSLPHTEY 304 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ YYII+PAEAS+NL R+DGVRYG R + + EM TR+ GFG+EV+ RIM+GTY Sbjct: 305 AVITYYIIAPAEASANLGRFDGVRYGFRELAAESAPEMMRKTRTEGFGKEVRRRIMLGTY 364 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLSS YD++Y +A ++RTLI++DF AFE+ D++LTPT+P A+PL + + + Sbjct: 365 VLSSGYYDAYYNKAMQVRTLIRQDFANAFEK-CDLLLTPTSPVVAYPLDAKMD---PLTV 420 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 DV T+ VNMAGLP IS+P + MP+G QLIG+ EETL E+ + + Sbjct: 421 YMLDVTTIPVNMAGLPGISIPCGFVD-NMPVGAQLIGKALGEETLLRAAYTFEQATDFHK 479 >gi|330718852|ref|ZP_08313452.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leuconostoc fallax KCTC 3537] Length = 486 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/475 (46%), Positives = 309/475 (65%), Gaps = 12/475 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K+ +A ELV + + I+ ++ Q+NA+I + A AA+ DK +A L GI Sbjct: 14 QLVNKETTATELVQATLDNIKATDDQLNAFITTNPESALEAAKALDKAGQFDNA--LAGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD ATKGI T A S IL F+P Y +T KL GA+ +GK NMDEFAMG S E Sbjct: 72 PLGLKDNMATKGIQTSAASRILKDFKPVYTATAVDKLNAAGAISVGKANMDEFAMGGSTE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TSYY + W D T PGGSSGGS+AAVAG ++G+DTGGSIRQPA+F G V Sbjct: 132 TSYYKTTTNAW---DHTK--VPGGSSGGSAAAVAGGQVPFALGSDTGGSIRQPAAFNGIV 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+ + A SLDQ G TRTV+D+A++L I+G+D+ D+T VPD+ Sbjct: 187 GMKPTYGRVSRWGLFAMASSLDQIGPFTRTVKDNALVLNTISGHDQRDSTSATREVPDFT 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L ++G+ + +PKEY + + + T + I+ L+ GA + E+SLPHT+Y + AY Sbjct: 247 SKLTGDVKGLRIAVPKEYFGEGIDERVSVTVRAAIAQLEALGATVDEVSLPHTKYGVAAY 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII +EASSNL RYDGV+YG R + K++ ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 307 YIIMSSEASSNLQRYDGVKYGFRADDVKNLEDLYVKTRSEGFGDEVKRRIMLGTFSLSAG 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+ + +A KIRTLI DF + FE DVI+ PT PT A+ +G+E ++ +M DV Sbjct: 367 AYDAFFKKAAKIRTLIIEDFNKVFED-YDVIVGPTAPTVAYGIGEEIDDPTAM--YLADV 423 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +SV A + +P+GLQ+IG+PF E T++ G E+ + F Sbjct: 424 LTIPVNLAGLPGMSVNAGFVD-NLPVGLQIIGKPFDESTVYQTGYAFEQASRLFE 477 >gi|218662699|ref|ZP_03518629.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium etli IE4771] Length = 304 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/304 (66%), Positives = 246/304 (80%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R +LR+K+I+A+EL D+YI AI+ +N ++NAY++V AR A +SD Sbjct: 1 MSELTSLTIAEARRKLRAKEITALELTDAYIAAIDAANERLNAYVKVTPDLARVMARKSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI G A +LEGIP+GIKD FAT G+HTQACSHILDGF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIAAGTAGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGSSNETSYYGPVI+PWR+ S + PGGSSGGS+AAVA LCA + TDT Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRAEGSNQQLVPGGSSGGSAAAVAAHLCAGATATDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+FTGTVGIKPTYGRCSR G ++FA SLDQAG I R VRD+AILLK++A D Sbjct: 181 GGSIRQPAAFTGTVGIKPTYGRCSRWGTVAFASSLDQAGPIARDVRDAAILLKSMASVDA 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+LPVPDYE L QS++GM +GIP EYR+D + I+ W+QGI+WLKDAGA+IV Sbjct: 241 KDTTSVDLPVPDYEAVLGQSLKGMKIGIPNEYRVDGMPEEIETLWRQGIAWLKDAGAEIV 300 Query: 301 EISL 304 +ISL Sbjct: 301 DISL 304 >gi|294631535|ref|ZP_06710095.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces sp. e14] gi|292834868|gb|EFF93217.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces sp. e14] Length = 497 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/488 (45%), Positives = 326/488 (66%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ + +E+ +++ S +++AVE+ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDIIKLTAAETAEKIASGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+G+ T S IL+G+ P Y++T+T++L V+L Sbjct: 61 EKRARGEKLGPLAGVPLALKDIFTTEGVPTTVGSKILEGWIPPYDATLTKRLKAADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+ GM VG+ K++R + P + + + + + LK+ GA+ Sbjct: 236 PMDSTSIDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQPGVMQCFDESVELLKELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+DG+RYGLR G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDGLRYGLRT-GDDGTHSAEEVTSLTREAG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS YD++Y A+K+RTLIK+DF +AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLIKQDFDKAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 414 PIGERADD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPVMKDDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|167031953|ref|YP_001667184.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas putida GB-1] gi|189045257|sp|B0KQG0|GATA_PSEPG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166858441|gb|ABY96848.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas putida GB-1] Length = 483 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/464 (47%), Positives = 304/464 (65%), Gaps = 10/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L K S+ EL + + I+ + Q+N++I V A A +D R G+ L G P Sbjct: 13 LADKSFSSEELTRALLARIKQLDPQINSFISVTEDLALGQARAADARRAAGETGALLGAP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T G+ T S +LD F+ Y++TV KL + G V LGK NMDEFAMGS+NE+ Sbjct: 73 IAHKDLFCTNGVRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANES 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQPA+ T G Sbjct: 133 SHYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+T + PVPDY Sbjct: 188 LKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDSTSIEEPVPDYSA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ S+QG+ +G+PKEY L P I + Q + L+ GA + EISLP+ Q+A+PAYY Sbjct: 248 NLNASLQGLRIGLPKEYFGAGLDPRIAELVQASVKELEKLGAVVKEISLPNMQHAIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ RIM+GTY LS+ Sbjct: 308 VIAPAEASSNLSRFDGVRFGYRCEEPKDLTDLYKRSRGEGFGVEVQRRIMVGTYALSAGY 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y++A++IR LIK DF AF VD+IL PTTP A+ LG + +S + DV+ Sbjct: 368 YDAYYVKAQQIRRLIKNDFMAAFND-VDLILGPTTPNPAWKLGAK--SSDPVAAYLEDVY 424 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 425 TINANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|228476309|ref|ZP_04061010.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Staphylococcus hominis SK119] gi|228269592|gb|EEK11098.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Staphylococcus hominis SK119] Length = 485 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/496 (44%), Positives = 323/496 (65%), Gaps = 22/496 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + +++K+I E+V AIE ++ + +++ + + A A+E D+ Sbjct: 3 IRYESVETLSEMIKNKEIKPSEVVKDIYDAIEETDPTIKSFLALDKENAIKKAKELDEL- 61 Query: 64 INGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 A+D L GIP+GIKD TK + T S +L+GF P YESTV KL AV+ Sbjct: 62 ---QAKDQFEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHQENAVL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GKLNMDEFAMG S ETSY+ ++P+ + PGGSSGGS+AAVA L S+G+ Sbjct: 119 IGKLNMDEFAMGGSTETSYFKKTVNPFDH-----QAVPGGSSGGSAAAVAAGLVPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AIAG Sbjct: 174 DTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAMVLEAIAGV 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T + D+ + + I+G+ + +PKEY + ++ + + +Q + LK GA+ Sbjct: 234 DKNDSTSAPVEDVDFTSEIGKDIKGLKIALPKEYLGEGVNEEVKTSVKQAVETLKSLGAE 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 + E+SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG Sbjct: 294 VDEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQTLEELYKMSRSEGFGD 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI +GT+ LSS YD+ Y +++K+RTLIK DF + FE DV++ PT PT+AF LG Sbjct: 354 EVKRRIFLGTFALSSGYYDAFYNKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLG 412 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 413 EEIDDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVA 469 Query: 478 QIIEKEAGYFRPHKWW 493 E + F H + Sbjct: 470 YQYETQ---FNLHDAY 482 >gi|16800933|ref|NP_471201.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria innocua Clip11262] gi|20454918|sp|Q92AQ3|GATA_LISIN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|16414368|emb|CAC97097.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Listeria innocua Clip11262] Length = 483 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/483 (45%), Positives = 308/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIEAVEDKVGSFITLNKETALGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF + F + DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVDVF-KNYDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N+AG+PAISVP E +P+GLQ+IG F E L+ V E+E Sbjct: 419 M--YSNDILTVPINLAGVPAISVPCGFSE-GLPVGLQIIGNYFEESLLYKVAHAFEQETT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|314936046|ref|ZP_07843395.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus hominis subsp. hominis C80] gi|313655863|gb|EFS19606.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus hominis subsp. hominis C80] Length = 485 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/496 (44%), Positives = 323/496 (65%), Gaps = 22/496 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + +++K+I E+V AIE ++ + +++ + + A A+E D+ Sbjct: 3 IRYESVETLSEMIKNKEIKPSEVVKDIYDAIEETDPTIKSFLALDKENAIKKAKELDEL- 61 Query: 64 INGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 A+D L GIP+GIKD TK + T S +L+GF P YESTV KL AV+ Sbjct: 62 ---QAKDQFEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHQENAVL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GKLNMDEFAMG S ETSY+ ++P+ + PGGSSGGS+AAVA L S+G+ Sbjct: 119 IGKLNMDEFAMGGSTETSYFKKTVNPFDH-----QAVPGGSSGGSAAAVAAGLVPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AIAG Sbjct: 174 DTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAMVLEAIAGA 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T + D+ + + I+G+ + +PKEY + ++ + + +Q + LK GA+ Sbjct: 234 DKNDSTSAPVEDVDFTSEIGKDIKGLKIALPKEYLEEGVNEEVKTSVKQAVETLKSLGAE 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 + E+SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG Sbjct: 294 VDEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQTLEELYKMSRSEGFGD 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI +GT+ LSS YD+ Y +++K+RTLIK DF + FE DV++ PT PT+AF LG Sbjct: 354 EVKRRIFLGTFALSSGYYDAFYNKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLG 412 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 413 EEIDDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVA 469 Query: 478 QIIEKEAGYFRPHKWW 493 E + F H + Sbjct: 470 YQYETQ---FNLHDAY 482 >gi|240146776|ref|ZP_04745377.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseburia intestinalis L1-82] gi|257201061|gb|EEU99345.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseburia intestinalis L1-82] Length = 489 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/487 (44%), Positives = 300/487 (61%), Gaps = 12/487 (2%) Query: 4 LNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +N M+++ E R+++K+IS E V + + AIE +N+++ V + A A+E K Sbjct: 5 MNIMSLTAVELGKRIKAKEISVEEAVTAALDAIEKKEKLVNSFVTVDREGALKRAKEVQK 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I +G L G+P+ IKD TK + T S IL F P Y + L GAV+LG Sbjct: 65 QIDDGTLTGPLAGVPVAIKDNMCTKDLLTTCSSKILYNFIPTYTAEAVLNLEKAGAVILG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+ ETS YG +PW + + PGGSSGGS AAVA C ++G+DT Sbjct: 125 KTNMDEFAMGSTTETSAYGETKNPWNT-----EHVPGGSSGGSCAAVAAEECVFALGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G + + V D A +L+AIA YD Sbjct: 180 GGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILEAIASYDT 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V D+ AL + GM +GIP++Y + L P + Q LK GA + Sbjct: 240 KDSTSVKREDYDFTSALVDDVAGMKIGIPRDYFGEGLDPEVKAAVLQAAEELKKKGAIVE 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E + + MY+ +RS GFG EV Sbjct: 300 EFDLSLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTKEYEGLHNMYKKSRSEGFGSEV 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G++VLSS YD++YL+A + + LIK+ F +AFE+ DVIL P PT+A LG+ Sbjct: 360 KRRIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDKAFEK-YDVILGPAAPTTAPKLGQS 418 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D++T++VN+AGLP IS+P + +P+GLQLIG F E+ + Sbjct: 419 LSDPIKM--YLGDIYTISVNLAGLPGISLPCGKDKNGLPIGLQLIGNCFEEKKIIRAAYA 476 Query: 480 IEKEAGY 486 E+ Y Sbjct: 477 FEQTRTY 483 >gi|302185333|ref|ZP_07262006.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. syringae 642] Length = 483 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/473 (46%), Positives = 309/473 (65%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L K S+ EL + I + Q+N++I + A A+ +D R G Sbjct: 4 MTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK NMDE Sbjct: 64 ENSPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+T + Sbjct: 179 PAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+SLP+ Sbjct: 239 DEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVSLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ RIM+ Sbjct: 299 LQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + N+ Sbjct: 359 GAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAD-VDVILGPTTPNPAWKIGAKTND--P 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 IAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|58336859|ref|YP_193444.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus acidophilus NCFM] gi|227903418|ref|ZP_04021223.1| possible amidase [Lactobacillus acidophilus ATCC 4796] gi|75433012|sp|Q5FLL1|GATA_LACAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|58254176|gb|AAV42413.1| Glu-tRNAGln amidotransferase subunit A [Lactobacillus acidophilus NCFM] gi|227868894|gb|EEJ76315.1| possible amidase [Lactobacillus acidophilus ATCC 4796] Length = 479 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/474 (47%), Positives = 312/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S ++SA +L + I+ ++ ++NA+I V+ A + K L GI Sbjct: 14 KLASGELSADKLAKDTVANIKETDKKLNAWITVLDDAKPAENLDYSKS-------KLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SH+L + P Y++TV KL GA +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGVKTTAASHMLYNYMPMYDATVISKLKKAGATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVAG A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGGDEHDSTVSVREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY +D +S + + Q+ I LKDAGA I E+SLPHT+YA+P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MDAVSGEMREVIQKQIDTLKDAGAIINEVSLPHTKYAVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG E+K RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGTEIKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E ++F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQIMAKRFDEGSIFKTADFIERTNKFY 470 >gi|34499810|ref|NP_904025.1| Glu-tRNA(Gln) amidotransferase subunit A [Chromobacterium violaceum ATCC 12472] gi|39931349|sp|Q7NPY7|GATA_CHRVO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|34105660|gb|AAQ62014.1| Glu-tRNA(Gln) amidotransferase, subunit A [Chromobacterium violaceum ATCC 12472] Length = 483 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/469 (47%), Positives = 305/469 (65%), Gaps = 9/469 (1%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K +S+VEL Y+ IE N Q+NA + V +K A A +D R+ GDAR L G+ Sbjct: 12 QLAAKQVSSVELASQYLDRIEALNPQLNAIVTVDREKTLAEARAADARLAAGDARALTGV 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ KD F +G T S +LD F Y + V ++ G V LG+ NMDEFAMGSSNE Sbjct: 72 PLVHKDLFCQQGWKTSCGSRMLDNFVSPYSAHVVEQCAAAGMVTLGRANMDEFAMGSSNE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S+YG V +PW PGGSSGGS+AAVA L + TDTGGSIRQPAS G Sbjct: 132 NSFYGAVKNPWDL-----NAIPGGSSGGSAAAVAARLAPVATATDTGGSIRQPASHCGVT 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYG SR G++++A SLDQ G I +T D A++L +AG+D D+T + DY Sbjct: 187 GIKPTYGVVSRYGMVAYASSLDQGGPIAQTAEDCALMLNVMAGFDARDSTSLERAKEDYA 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R L+QS+ G+ VG+PKEY L + + ++ LK GA+ VEISLP+T+ ++PAY Sbjct: 247 RDLNQSLSGLKVGLPKEYFAAGLDADVARAVDNAVAELKKLGAEAVEISLPNTELSIPAY 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+PAEAS+NL+RYDGVRYG R + KD+++MYE TR+ GFG EVK RI++G+YVLS Sbjct: 307 YVIAPAEASTNLSRYDGVRYGHRAKDYKDLVDMYEKTRAEGFGDEVKRRILVGSYVLSHG 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+KIR LI DF AFEQ DVIL P PT+AF +G++ + M +D+ Sbjct: 367 YYDAYYLKAQKIRRLIANDFKAAFEQ-CDVILGPVAPTAAFNIGEKSGDPVQM--YLSDI 423 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +T++VN+AGLP +SVPA P+GLQ+IG F E + +V ++ Sbjct: 424 YTLSVNLAGLPGMSVPAGFAANGRPIGLQIIGNYFAEARMLNVAHQFQQ 472 >gi|223044026|ref|ZP_03614066.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Staphylococcus capitis SK14] gi|222442569|gb|EEE48674.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Staphylococcus capitis SK14] Length = 485 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/476 (46%), Positives = 319/476 (67%), Gaps = 13/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + + +++K+I E+V AIE ++ + +++ + + A AEE D + Sbjct: 3 IRYESVEKLTEMIKNKEIKPSEVVKDIYAAIEETDPTIKSFLALDKENAIKKAEELDD-L 61 Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 D D L GIP+GIKD TK + T S +L+GF P YESTV KL AV++GK Sbjct: 62 QAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHGENAVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTG Sbjct: 122 LNMDEFAMGGSTETSYFKKTLNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+AI+L+ I+G D Sbjct: 177 GSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAIVLETISGVDAN 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ + + I+G+ V +PKEY + +S + + ++ + LK GA++ E Sbjct: 237 DSTSAPVEDVDFTSDIGKDIKGLKVALPKEYLGEGVSEEVKTSVKEAVETLKSLGAEVGE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG EVK Sbjct: 297 VSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI +GT+ LSS YD++Y +++K+RTLIK DF + FE+ DV++ PT PT+AF LG+E Sbjct: 357 RRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFEE-YDVVVGPTAPTTAFNLGEEI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 416 DDPLTM--YANDLLTTPVNLAGLPGISVPCGQFNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|257887198|ref|ZP_05666851.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,141,733] gi|257823252|gb|EEV50184.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,141,733] Length = 490 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/483 (45%), Positives = 318/483 (65%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ ++ E L SK+I+ +L + + I+ + ++ A+I + KA A+ D Sbjct: 1 MTKIHNRSLEELHRMLVSKEITVQDLTKATFERIKETEPEIEAFITLNEVKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNILAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++P + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVAPGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|73662200|ref|YP_300981.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|109891988|sp|Q49YU4|GATA_STAS1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|72494715|dbj|BAE18036.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 485 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/494 (44%), Positives = 324/494 (65%), Gaps = 19/494 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + +++K+I+ ++V AIE ++ + +++ + + A A+E D+ Sbjct: 3 IRYESVENLINLIKNKEITPSKVVSDIYDAIEETDPTIKSFLALDKENAIKKAQELDEL- 61 Query: 64 INGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 A+D L GIP+GIKD T+G+ T S +L+GF P YESTV KL + AV+ Sbjct: 62 ---QAKDQMEGKLFGIPMGIKDNIITEGVETTCASKMLEGFVPIYESTVMNKLRNEQAVL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GKLNMDEFAMG S ETSYY ++P+ D T PGGSSGGS+AAVA L S+G+ Sbjct: 119 IGKLNMDEFAMGGSTETSYYKKTVNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G +TRTV+D+A++L+AI G Sbjct: 174 DTGGSIRQPAAYCGIVGLKPTYGRVSRFGLVAFASSLDQIGPLTRTVKDNALVLEAITGV 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DE D+T + DY + + I+G+ + +P EY + +S + + ++ + L+ GA Sbjct: 234 DENDSTSAPVEDADYTSDIGKDIKGLKIALPSEYLGEGVSDEVKASVKEAVETLRGLGAT 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 + E+SLP+T+Y +P+YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+ Sbjct: 294 VEEVSLPNTKYGIPSYYVIASSEASSNLSRFDGIRYGYHSPEANSLEELYKMSRSEGFGE 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI +GT+ LSS YD+ Y +++K+RTLIK DF FE DV++ PTTPT+AF LG Sbjct: 354 EVKRRIFLGTFALSSGYYDAFYKKSQKVRTLIKDDFNRIFEN-YDVVVGPTTPTTAFNLG 412 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 413 DEIDDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVA 469 Query: 478 QIIEKEAGYFRPHK 491 E + + ++ Sbjct: 470 YQYETKFNFHNEYE 483 >gi|148546214|ref|YP_001266316.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas putida F1] gi|166217703|sp|A5VZ22|GATA_PSEP1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148510272|gb|ABQ77132.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pseudomonas putida F1] Length = 483 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/476 (46%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L K S+ EL + + I+ + Q+N++I + A A A +D R Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISITDDLALAQARAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G PI KD F T G+ T S +LD F+ Y++TV KL + G V LGK N Sbjct: 61 AAGETGVLLGAPIAHKDLFCTNGVRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPATTGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + PVPDY +L+ S+QG+ +G+PKEY L P I Q + L+ GA + EIS Sbjct: 236 TSIEEPVPDYSASLNASLQGLRIGLPKEYFGAGLDPRIADLVQASVKELEKLGAVVKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEEPKDLTDLYKRSRGEGFGVEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++Y++A++IR LIK DF AF VD+IL PTTP A+ LG + + Sbjct: 356 IMVGTYALSAGYYDAYYVKAQQIRRLIKNDFMAAFND-VDLILGPTTPNPAWKLGAK--S 412 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + DV+T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 413 SDPVAAYLEDVYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|92114364|ref|YP_574292.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chromohalobacter salexigens DSM 3043] gi|122419659|sp|Q1QVB5|GATA_CHRSD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91797454|gb|ABE59593.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chromohalobacter salexigens DSM 3043] Length = 486 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/468 (47%), Positives = 316/468 (67%), Gaps = 11/468 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR+ + S+ EL S + I+ + +N++I V A++A A A+ +D+ +GDA L G+P Sbjct: 13 LRAGEFSSRELCQSALDRIQRLDGDLNSFISVTAEQALADADAADQARASGDAAALAGLP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F T+G+ T S +LD F Y++TV +K+ G V LGK NMDEFAMGSSNE Sbjct: 73 LALKDIFCTQGVRTSCGSKMLDSFVAPYDATVVEKIRQAGGVSLGKTNMDEFAMGSSNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW SSGGS+AAVA L A++GTDTGGSIRQPA+F G G Sbjct: 133 SFYGPVKNPWDLSAVPGG-----SSGGSAAAVAAGLVPAALGTDTGGSIRQPAAFCGITG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G++++A SLDQ G + RT D A+LL+ IAG+D D+T V VPDY Sbjct: 188 LKPTYGRVSRYGMVAYASSLDQGGPMARTAADCALLLETIAGHDVRDSTSVARVVPDYSA 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD S+ G+ +G+PKEY D L P ++ ++ I + GAK+ E+SLPHT A+PAYY Sbjct: 248 ELDTSLAGLKIGLPKEYFGDGLDPEVETAVREAIKVYESLGAKVCEVSLPHTHLAIPAYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+RYDGVR+G R E D+ ++Y+ TR+ GFG+EVK RI+IGT+ LS Sbjct: 308 VIAPAEASSNLSRYDGVRFGHRCEDPTDLEDLYKRTRAEGFGEEVKRRILIGTHTLSEGF 367 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D++YL+A+++R LI++DF +AF++ VDV++ PT PT AF LG +++ + D++ Sbjct: 368 FDAYYLKAQQVRRLIRQDFLDAFDE-VDVLMGPTAPTPAFDLGAQKD---PVSMYLQDIY 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+AVN+AG+P ISVPA + P+GLQ++ F E L V ++ Sbjct: 424 TIAVNLAGIPGISVPAGFAGNR-PVGLQVLAPHFAEAQLLGVAHQFQQ 470 >gi|294651327|ref|ZP_06728648.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Acinetobacter haemolyticus ATCC 19194] gi|292822799|gb|EFF81681.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Acinetobacter haemolyticus ATCC 19194] Length = 492 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/479 (46%), Positives = 320/479 (66%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L+ S+ EL + Y++ I ++++ +Y+ V A++A A+ +D Sbjct: 1 MTDLHRLSIRELSEGLKQAQFSSRELTEHYLKRIAKIDAKVKSYVTVTAEQALVEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I +G+A L GIP+ KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AAIKSGNAHALAGIPLAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKAKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY+G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYFGATGNPW-ALD----HVPGGSSGGSAAAVAADLAPIATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I+FA SLDQ G + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAFASSLDQGGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V+ V DY L+ +++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVDKEVDDYVANLNGIAVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E KDIL++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPKDILDLYKRSRSEGFGA 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|330981108|gb|EGH79211.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 483 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/473 (46%), Positives = 309/473 (65%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L K S+ EL + I + Q+N++I + A A+ +D R G Sbjct: 4 MTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK NMDE Sbjct: 64 ENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+T + Sbjct: 179 PAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+SLP+ Sbjct: 239 DEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVSLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ RIM+ Sbjct: 299 LQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + N+ Sbjct: 359 GAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAD-VDVILGPTTPNPAWKIGAKTND--P 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 IAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|291549446|emb|CBL25708.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ruminococcus torques L2-14] Length = 496 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/476 (43%), Positives = 303/476 (63%), Gaps = 11/476 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L A+ E +++++K+++ E VD+ I I+ + S++++++ + + A A AEE Sbjct: 1 MDLLKLTAL-ELGEKIKAKEVTVREAVDAVIGQIKEAESEIHSFVTIDEEGAYAQAEEIQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K+I G+ L G+P+ +KD +G T S IL F+P Y + + L GAV++ Sbjct: 60 KKIDAGELTGPLAGVPVAVKDNMCIEGQLTTCSSKILSNFKPTYTAEAVENLRKAGAVII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETSYYGP +P + PGGSSGGS AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSYYGPTRNPHNTA-----HVPGGSSGGSCAAVAASECYYALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G VG+KPTYG SR G+I++ SLDQ G + + V D A +L+AIA +D Sbjct: 175 TGGSIRQPSSFCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPVAKDVSDCAAILEAIASHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T ++ D+ AL ++G+ +GIP++Y + L P ++ + L++ GA + Sbjct: 235 PKDSTSMDRDDCDFTEALVDDVKGLRIGIPRDYMGEGLDPEVNDAVMKAAKVLEEKGAIV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 L +YA+PAYY I+ AEASSNL R+DGV+YG R + D L MY+ TRS GFG E Sbjct: 295 EAFDLRLVKYAIPAYYTIADAEASSNLERFDGVKYGYRTKDYDGLHNMYKKTRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK++F AF + D+IL P PT+A LGK Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKKEFDRAF-RNYDIILGPAAPTTAPELGK 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + S M D++T++VN+AGLP +SVP K +P+G+QLIG F E+TL Sbjct: 414 --SLSDPMKMYLGDIYTISVNLAGLPGMSVPVGKDSKGLPIGMQLIGNVFEEKTLI 467 >gi|302524945|ref|ZP_07277287.1| glutamyl-tRNA(Gln) amidotransferase [Streptomyces sp. AA4] gi|302433840|gb|EFL05656.1| glutamyl-tRNA(Gln) amidotransferase [Streptomyces sp. AA4] Length = 505 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/487 (46%), Positives = 321/487 (65%), Gaps = 18/487 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + +E ++ ++++SAVE+ +++ I + ++A++ V + A AA+ D Sbjct: 1 MSELVKLTAAELAAKIHAREVSAVEVAQAHLDRIAAVDDHVHAFLHVDTEGALGAAKAVD 60 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +++ G+ A L G+P+ +KD TKG+ T S L+G+ P Y++TVT+KL + G V+ Sbjct: 61 EQLAAGEQPASPLAGVPLALKDVLTTKGVPTTCGSRTLEGWLPPYDATVTRKLREAGVVI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YGP +PW PGGS GGSSAA++ F A +IGT Sbjct: 121 LGKTNMDEFAMGSSTENSAYGPTHNPWDHAR-----IPGGSGGGSSAAISAFEAALAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQP + TGTVG+KPTYG SR G+++F+ SLDQAG RTV D+A+L +AIAGY Sbjct: 176 DTGGSIRQPGAVTGTVGVKPTYGGVSRYGLVAFSSSLDQAGPCARTVLDAALLHEAIAGY 235 Query: 239 DECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T +N PVP A + + G+ VG+ KE+ D + ++++ + L+ Sbjct: 236 DPMDSTSINAPVPPVVAAAREGAKGDLSGVRVGVVKEFGGDGYQTGVLRSFEAAVEQLRA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR 351 GA++VE+S PH YALPAYY+I+P+EASSNLAR+D +RYGLRV E+ TR Sbjct: 296 LGAEVVEVSCPHFTYALPAYYLIAPSEASSNLARFDAMRYGLRVSDDGEHSAEEVMSLTR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RIM+GTY LSS YD++Y A+K+RTLI RDFT+AFE+ VDV+++PTTPT Sbjct: 356 EKGFGAEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFTQAFEK-VDVLVSPTTPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF LG+ ++ M D+ T+ N+AG A+SVP+ L E +P+GLQ++ + Sbjct: 415 TAFKLGERVDD--PMAMYLADLCTIPSNLAGNAAMSVPSGLSDEDGLPVGLQIMAPALAD 472 Query: 471 ETLFSVG 477 + L+ VG Sbjct: 473 DRLYRVG 479 >gi|70726053|ref|YP_252967.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus haemolyticus JCSC1435] gi|109891987|sp|Q4L7L4|GATA_STAHJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|68446777|dbj|BAE04361.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Staphylococcus haemolyticus JCSC1435] Length = 485 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/492 (44%), Positives = 319/492 (64%), Gaps = 14/492 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + + +++ +I E+V AIE ++ + +++ + A A+E D+ Sbjct: 3 IRYESVEKLSEMIKNNEIKPSEVVKDIYDAIEETDPTIKSFLALDKDNAIKKAKELDELQ 62 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+GIKD TK + T S +L+GF P YESTV KL D A+++GKL Sbjct: 63 AKGQMEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLHDENAILIGKL 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTGG Sbjct: 123 NMDEFAMGGSTETSYFKQTVNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGSDTGG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+AI+L+ I+G D D Sbjct: 178 SIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAIVLETISGVDRND 237 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + D+ + + I+G+ V +PKEY + ++ + + + + LK GA++ E+ Sbjct: 238 STSAPVEDVDFTSEIGKDIKGLKVALPKEYLGEGINEDVKEAVKNAVETLKSLGAEVDEV 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG EVK Sbjct: 298 SLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGAEVKR 357 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI +GT+ LSS YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG E + Sbjct: 358 RIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGDEID 416 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V E Sbjct: 417 DPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVAYQYE 473 Query: 482 KEAGYFRPHKWW 493 + F H + Sbjct: 474 TQ---FNLHDAY 482 >gi|294497115|ref|YP_003560815.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A [Bacillus megaterium QM B1551] gi|294347052|gb|ADE67381.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Bacillus megaterium QM B1551] Length = 485 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 220/476 (46%), Positives = 313/476 (65%), Gaps = 11/476 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE L K++ +LVD + I + ++ A++ + ARA A+E D+ + D Sbjct: 8 LSELHSLLHKKEVRVQDLVDESYKRINEVDDKVGAFLALNEDNARAYAKELDEALQTKDE 67 Query: 69 RDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD TK + T S IL F P Y++TV QKL AV +GKLNMDEF Sbjct: 68 FGLLFGMPIGVKDNIVTKDLRTTCSSKILANFDPIYDATVVQKLQAAEAVTIGKLNMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 128 AMGSSTENSGLQLTRNPW-NLD----YVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G IT +V D+A LL+AI+G D D+T N Sbjct: 183 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITNSVEDNAYLLQAISGVDPMDSTSAN 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VPDY AL ++G+ + +PKEY + + ++ + L+ GA E+SLPH+ Sbjct: 243 VDVPDYVSALTGDVKGLKIAVPKEYLGEGVGEEARQSVLDALKVLEGLGATWEEVSLPHS 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL YY++S +EAS+NL+R+DGVRYG R + ++++EMY+ +RS GFG EVK RIM+G Sbjct: 303 KYALATYYLLSSSEASANLSRFDGVRYGYRTDNAENLIEMYKQSRSEGFGNEVKRRIMLG 362 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A+++RTLIK+DF FE DVI+ PTTPT +F +G++ ++ +M Sbjct: 363 TFALSSGYYDAYYKKAQQVRTLIKQDFESVFEN-YDVIIGPTTPTPSFKIGEKTDDPLTM 421 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ VN+AG+P ISVP L +PLGLQ+IG+ F E T++ V E+ Sbjct: 422 --YANDILTIPVNLAGVPGISVPCGLS-NGLPLGLQIIGKHFDESTIYRVAHAFEQ 474 >gi|256850557|ref|ZP_05555983.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus crispatus MV-1A-US] gi|256712580|gb|EEU27575.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus crispatus MV-1A-US] Length = 479 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/474 (46%), Positives = 311/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A+ +D ++ L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDD-----AKPADN--LDYSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL G +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGVTFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+A+VA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAASVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ + + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVDGKMREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|227877016|ref|ZP_03995108.1| possible amidase [Lactobacillus crispatus JV-V01] gi|227863387|gb|EEJ70814.1| possible amidase [Lactobacillus crispatus JV-V01] Length = 479 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/474 (46%), Positives = 311/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A+ +D ++ L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDD-----AKPADN--LDYSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL G +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGVTFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ + + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVDGKMREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|242371791|ref|ZP_04817365.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus epidermidis M23864:W1] gi|242350492|gb|EES42093.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus epidermidis M23864:W1] Length = 485 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/480 (45%), Positives = 318/480 (66%), Gaps = 19/480 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +V + + +++K+I ++V AIE ++ + +++ + A AEE D+ Sbjct: 3 IRYESVEKLTEMIKNKEIKPSDVVKDIYAAIEETDPTIKSFLALDKDNAIKKAEELDEL- 61 Query: 64 INGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 A+D L GIP+GIKD TK + T S +L+GF P YESTV KL+D AV+ Sbjct: 62 ---QAKDQMEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIYESTVMNKLYDENAVL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GKLNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+ Sbjct: 119 IGKLNMDEFAMGGSTETSYFKKTLNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+ I+G Sbjct: 174 DTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLETISGV 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+T + D+ + + I+G+ + PKEY + +S + + I L+ GA+ Sbjct: 234 DANDSTSAPVEDVDFTSDIGKDIKGLKIAFPKEYVSEGISEEVKDAVKNAIETLRSLGAE 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 + ++SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG Sbjct: 294 VEQVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGD 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI +GT+ LSS YD+ Y +++K+RTLIK DF + FE+ DV++ PTTPT+AF +G Sbjct: 354 EVKRRIFLGTFALSSGYYDAFYKKSQKVRTLIKNDFDKVFEE-YDVVVGPTTPTTAFNIG 412 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 413 EEIDDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVA 469 >gi|302133796|ref|ZP_07259786.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 483 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/476 (45%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIAQLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + ++S Sbjct: 236 TSIDEPVPDYSPSLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKQVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + ++ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTHD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAQYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|309808907|ref|ZP_07702788.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 01V1-a] gi|309809419|ref|ZP_07703281.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners SPIN 2503V10-D] gi|312873432|ref|ZP_07733483.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 2052A-d] gi|308167905|gb|EFO70042.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 01V1-a] gi|308170330|gb|EFO72361.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners SPIN 2503V10-D] gi|311091116|gb|EFQ49509.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 2052A-d] Length = 479 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/474 (43%), Positives = 302/474 (63%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++K+I+A +L + I+ ++NA I V+ AE D + +L GI Sbjct: 14 KLKNKEITAEQLTQDTLAKIKELEPKLNAMITVIDDAK--PAENLDF------SNELAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T + T A SHIL + P Y++TV KL ++GK NMDEFAMGSS+E Sbjct: 66 PIAVKDNIITNNVKTTAASHILYNYMPVYDATVVSKLKAAKMTIIGKTNMDEFAMGSSSE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW T + G ++ + V A++GTDTGGSIRQPA+F G Sbjct: 126 NSYFGAPKNPWDLTKVTGGSSGGSAAAVAGGEVI-----AALGTDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L ++G D+ DAT VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVQDSAKILNVLSGADDHDATVSEREVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL+Q ++G+ V +P+EY + +S + ++ I L+D GA I ++SLPHT+Y +P Y Sbjct: 241 KALNQDVKGLRVAVPEEYFGEGISEKVKALIKEQIKVLEDNGAIINKVSLPHTKYVIPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRFDGIRYGYRSKDAKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI RDF + FE+ DVI+ PTTPT AF L + + M ND+ Sbjct: 361 SYDRFFRQAAKVRTLICRDFEKIFEEN-DVIVGPTTPTPAFGLNSKTKDPLEM--YANDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T+A N+AG+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTIAANLAGVPAASVPAGLVD-GMPVGLQIMAKRFDEESIFRVADFIERSNKFY 470 >gi|301057112|ref|ZP_07198252.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [delta proteobacterium NaphS2] gi|300448793|gb|EFK12418.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [delta proteobacterium NaphS2] Length = 486 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 209/475 (44%), Positives = 302/475 (63%), Gaps = 16/475 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 LR ++S+ E+ +S + I+ + +NA+I + A A+ +D++ G D L GI Sbjct: 20 LRRGEVSSREITESVFKRIDEREASINAFITTTREIALKQADLADEKFSKGGDLPLLTGI 79 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKGI T S IL+ F P Y +T QKL D GAV++GK NMDEFAMGSS E Sbjct: 80 PVAVKDVLCTKGIKTTCGSKILENFVPTYNATAFQKLQDAGAVIVGKANMDEFAMGSSTE 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S GP +P D T ++ + + A +GTDTGGSIRQP +F G Sbjct: 140 NSIAGPTRNPN---DITKVAGGSSGGSAAAVSSGESILA--LGTDTGGSIRQPCAFCGVT 194 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I++A SLDQ G I +TV D A++L I+G+D D T + PD+ Sbjct: 195 GIKPTYGRVSRYGLIAYASSLDQIGAIGKTVSDCAMMLDVISGHDPLDTTSSQVEKPDFL 254 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL + I G+ +GIP+E+ + L P I + ++ L+ GA+++ I+LPH+ +A+ AY Sbjct: 255 KALSKGIDGVRIGIPQEFFAEGLDPKIKEKVLDAVTLLEKNGAQVISINLPHSPFAIGAY 314 Query: 315 YIISPAEASSNLARYDGVRYGLRV--EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y+I+ AEASSNLAR+DGV+YG R + D L MY TR+ GFG EVK RIM+GTYVLS+ Sbjct: 315 YLIATAEASSNLARFDGVKYGYRKSEDDGDCLAMYHKTRTTGFGTEVKRRIMLGTYVLSA 374 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++YL+A+K R +IK+DF EAF + VD I+TP +P F LG++ + M + D Sbjct: 375 GYYDAYYLKAQKARAMIKKDFDEAFRE-VDCIMTPVSPCLPFALGEKMTDPLQMYLV--D 431 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG----QIIEKE 483 ++TV++N+AGLP +S+P + +P+GLQ+IG+PF E + G Q++EK+ Sbjct: 432 IYTVSLNLAGLPGMSLPCGTID-GLPVGLQIIGKPFDEGMVLRAGAAYEQLVEKQ 485 >gi|295692393|ref|YP_003601003.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Lactobacillus crispatus ST1] gi|295030499|emb|CBL49978.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus crispatus ST1] Length = 479 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/474 (46%), Positives = 311/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A+ +D ++ L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDD-----AKPADN--LDYSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL G +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYSYMPMYDATVISKLKKAGVTFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ + + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVDGKMREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|28871609|ref|NP_794228.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas syringae pv. tomato str. DC3000] gi|213966632|ref|ZP_03394783.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas syringae pv. tomato T1] gi|301383142|ref|ZP_07231560.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. tomato Max13] gi|302063730|ref|ZP_07255271.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. tomato K40] gi|39931522|sp|Q87WR9|GATA_PSESM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|28854861|gb|AAO57923.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213928482|gb|EEB62026.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas syringae pv. tomato T1] gi|331016666|gb|EGH96722.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 483 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/476 (45%), Positives = 312/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIAQLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + ++S Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKQVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + ++ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTHD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAQYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|309804553|ref|ZP_07698618.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 09V1-c] gi|309805827|ref|ZP_07699862.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 03V1-b] gi|325913332|ref|ZP_08175700.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus iners UPII 60-B] gi|329920381|ref|ZP_08277113.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus iners SPIN 1401G] gi|308165945|gb|EFO68163.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 09V1-c] gi|308167736|gb|EFO69880.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LactinV 03V1-b] gi|325477435|gb|EGC80579.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus iners UPII 60-B] gi|328936057|gb|EGG32510.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus iners SPIN 1401G] Length = 479 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/474 (43%), Positives = 302/474 (63%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++K+I+A +L + I+ ++NA I V+ AE D + +L GI Sbjct: 14 KLKNKEITAEQLTQDTLAKIKELEPKLNAMITVIDDAK--PAENLDF------SNELAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T + T A SHIL + P Y++TV KL ++GK NMDEFAMGSS+E Sbjct: 66 PIAVKDNIITNNVKTTAASHILYNYMPVYDATVVSKLKAAKMTIIGKTNMDEFAMGSSSE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW T + G ++ + V A++GTDTGGSIRQPA+F G Sbjct: 126 NSYFGAPKNPWDLTKVTGGSSGGSAAAVAGGEVI-----AALGTDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L ++G D+ DAT VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVQDSAKILNVLSGADDHDATVSEREVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL+Q ++G+ V +P+EY + +S + ++ I L+D GA I ++SLPHT+Y +P Y Sbjct: 241 KALNQDVKGLRVAVPEEYFGEGISEKVKALIKEQIKVLEDHGAIINKVSLPHTKYVIPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRFDGIRYGYRSKDAKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI RDF + FE+ DVI+ PTTPT AF L + + M ND+ Sbjct: 361 SYDRFFRQAAKVRTLICRDFEKIFEEN-DVIVGPTTPTPAFGLNSKTKDPLEM--YANDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T+A N+AG+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTIAANLAGVPAASVPAGLVD-GMPVGLQIMAKRFDEESIFRVADFIERSNKFY 470 >gi|291528242|emb|CBK93828.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Eubacterium rectale M104/1] Length = 503 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 211/484 (43%), Positives = 302/484 (62%), Gaps = 11/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ AV E ++++K+++ E V + I +I+ ++N+++ + + A A E Sbjct: 1 MDLMSLTAV-ELGKKIQAKEVTVEEAVKAAIASIKAKEEKINSFVTIDEEGALKKAAEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +I G+ + L G+P+ IKD T+G+ T S IL F P Y + ++L D G V++ Sbjct: 60 AKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKILYNFIPTYTAEAVKRLEDAGCVIV 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +G +PW + + PGGSSGGS AAVA ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGATKNPWNT-----EHVPGGSSGGSCAAVAAEEVPFALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G I + V D A +L+AIA YD Sbjct: 175 TGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILEAIASYD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T VN + AL ++GM +GIPK+Y D L P + LK GA + Sbjct: 235 TKDSTSVNRDDLKFTEALVDDVKGMKIGIPKDYLGDGLDPEVKSAILAAADELKKKGAVV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E D+ MY+ +RS GFG E Sbjct: 295 EEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTKEYTDLHNMYKKSRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A +++ LIK+ F +AF + DVIL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRVKALIKKAFDDAFAK-YDVILGPAAPTTAPKLG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E+ S + D++T++VN+AGLP IS+P + + +P+GLQLIG F+E+ + Sbjct: 413 -ESLSDPIQMYLGDIYTISVNLAGLPGISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAY 471 Query: 479 IIEK 482 EK Sbjct: 472 SFEK 475 >gi|157149892|ref|YP_001449752.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus gordonii str. Challis substr. CH1] gi|189045265|sp|A8AVE2|GATA_STRGC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157074686|gb|ABV09369.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 488 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 210/486 (43%), Positives = 303/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + + I+ ++++I V ++A A A D + Sbjct: 3 FNHKTIEELHDLLVKKEISAVELTQATLADIKEREGAVDSFITVSEEEALAKAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L ++P +++T +KL+ +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYKPIFDATSVEKLYGKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S+E SY+ + W PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSSENSYFKTTKNAWDGSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D D+ Sbjct: 177 IRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VPD+ + Q I+GM + +PKEY + + + +T L+ GA + E+S Sbjct: 237 TSSQEAVPDFTNKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y +RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDIENLEDVYVKSRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + FE+ D+IL PT PT A+ LG + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEK-YDLILGPTAPTVAYDLGSQNQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG F E T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGLQLIGNHFDEATIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|24380184|ref|NP_722139.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus mutans UA159] gi|39931557|sp|Q8DSG5|GATA_STRMU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|24378188|gb|AAN59445.1|AE015009_5 putative glutamyl-tRNA(Gln) amidotransferase A subunit [Streptococcus mutans UA159] Length = 488 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 307/486 (63%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E D L +K++SA+EL + ++ I+ + ++I V ++A A A D++ Sbjct: 3 FNHKSIDELHDLLVNKEVSALELTKATLEDIKEREETVGSFITVTQEEALAQAAAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TK I T A S +L ++P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTKNILTTAASKMLYNYKPIFDATSVEKLYGRDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S E SY+ + W + GGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTENSYFKLTKNAWNQ-----EKVAGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VGIKPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D+ D+ Sbjct: 177 IRQPAAFNGVVGIKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDKKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + VPD+ + + + I+GM + +PKEY + + +T + L+ GA + E+S Sbjct: 237 TSSQVKVPDFTQFIGKDIKGMKIALPKEYIGQGIDEKVKETILKAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + + L ++Y NTRS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTDDYENLDDVYVNTRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PT PT A+ L + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMEDFKKVFAN-YDLILGPTAPTVAYDLDSQHQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA E +P+G+QLIG+PF E+T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFVE-GLPVGMQLIGKPFAEQTIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 STDYHK 478 >gi|256847804|ref|ZP_05553249.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus coleohominis 101-4-CHN] gi|256715493|gb|EEU30469.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus coleohominis 101-4-CHN] Length = 490 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/490 (44%), Positives = 313/490 (63%), Gaps = 12/490 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N +++ ++L + ++SA EL + I+N+ + A++ + + A A D+ Sbjct: 3 FNETNITDLHNQLVNGEVSATELTKESFKQIKNTEDDVQAFLTLNEEAALKQAAALDQSG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I D + L GIP KD +TKG+ T A S IL F+P Y +TV + L G++ +GK N Sbjct: 63 IQDD-QILAGIPFATKDMISTKGLRTTAASKILKDFKPIYNATVIENLNHAGSINVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +DEFAMGSS E S + P +PW D T PGGSSGGS+AAVA A++GTDTGGS Sbjct: 122 LDEFAMGSSTENSGFKPTKNPW---DLTR--VPGGSSGGSAAAVAAGDVLAALGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+I+FA S DQ G +T+ V+D+A+L++AI+G D D Sbjct: 177 IRQPASFNGIVGMKPTYGRVSRWGVIAFASSFDQVGWLTKNVKDNALLMEAISGVDHHDM 236 Query: 244 TCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T N PVP + LDQ S++G+ + +P+EY D + + + Q + + GA I + Sbjct: 237 TSANRPVPHWAANLDQASVKGLKIAVPEEYVSDAIDEDVREVVQAALKHYESLGATIDTV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 SLPHT+Y + AYYI++ +EASSNL RYDG+RYG R + K++ ++Y TR+ GFG+EVK Sbjct: 297 SLPHTKYGVSAYYILASSEASSNLQRYDGIRYGFRADDFKNLEDVYVRTRTEGFGEEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GT+ LS+ YD+++ +A K+R LI DF + FE DVI+ T ++AFP G + Sbjct: 357 RIMLGTFSLSAGFYDAYFNKAAKVRRLIADDFNKVFED-YDVIMGATDASTAFPFGDKIT 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQII 480 + M NDV T+ VNMAGLPA+S+PA +K MP+GLQ+IG+PF E+T++ Sbjct: 416 DPTKM--YMNDVLTIPVNMAGLPAMSLPAGFSKKDGMPVGLQIIGKPFDEQTIYDAAYAF 473 Query: 481 EKEAGYFRPH 490 E+ + + + Sbjct: 474 EQTTDFHKKN 483 >gi|242279035|ref|YP_002991164.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfovibrio salexigens DSM 2638] gi|259647211|sp|C6BSE9|GATA_DESAD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|242121929|gb|ACS79625.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio salexigens DSM 2638] Length = 487 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 215/486 (44%), Positives = 311/486 (63%), Gaps = 13/486 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L +++E L +K+++A E V + ++ I S + A + + +A AEE D Sbjct: 1 MSALIEKSLTEIHAMLMTKEVTATEAVKACLEQIAKSEPETKALLHICNDEALKQAEEMD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + ++ L G+P+ IKD AT GI T A S IL+GF P Y+ST KL + GA+++G Sbjct: 61 AAGPDA-SKPLWGVPVVIKDALATNGIPTTAGSKILEGFTPFYDSTAVAKLKEAGAIIVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+ E S Y +PW + PGGSSGGS A VA C A++GTDT Sbjct: 120 KANMDEFAMGSTTENSAYQTTTNPWDA-----SRVPGGSSGGSGATVAAGQCYAALGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PASF G VG+KPTYGR SR G+I++ SLDQ G +TRTV D+A +L I G+D+ Sbjct: 175 GGSIRLPASFCGCVGVKPTYGRVSRYGMIAYGSSLDQIGPMTRTVEDAARVLNVIGGHDQ 234 Query: 241 CDATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T P+ D+ AL++ + G+T+G+P+EY + LS + + + I+ ++ GAK Sbjct: 235 RDSTSAEQPMEDFVAALEERKDLSGLTIGLPEEYWGEGLSKEVSEACRAAIAKAEELGAK 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 V + L T+YA+ YYII+ AEASSNL+R+DGVRYG R E K++ E+Y +R+ FG Sbjct: 295 TVPVKLSMTEYAIATYYIIAMAEASSNLSRFDGVRYGHRTEDPKELAELYTKSRTEAFGD 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTYVLS+ YD++Y +A +IR L++ DF +AFE D+I +P PT+AFP+G Sbjct: 355 EVQRRIIIGTYVLSAGYYDAYYRKAAQIRRLLREDFNKAFES-CDIIASPACPTTAFPVG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSV 476 E S + D+FT+++N+ G+P +S+P A E MP+GLQ + F E+T+ Sbjct: 414 --ELTSDPLQMYLQDIFTISLNLVGMPGMSLPVAFGKETNMPVGLQFMAPAFDEKTMLQA 471 Query: 477 GQIIEK 482 ++EK Sbjct: 472 AHVLEK 477 >gi|87307702|ref|ZP_01089845.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Blastopirellula marina DSM 3645] gi|87289316|gb|EAQ81207.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Blastopirellula marina DSM 3645] Length = 513 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 210/495 (42%), Positives = 302/495 (61%), Gaps = 36/495 (7%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 +L S +I++VEL + + I+ ++ Q+ A+++V+++ A AE D R G+ L G Sbjct: 14 QLESGEITSVELTKACLAQIDVADKQVGAFLKVMSESALEQAESVDTRRKKGEKLGRLAG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD TKG T S +L+ F P Y++TV KL AV++GK NMDEFAMG S Sbjct: 74 VPVAIKDLLCTKGETTTCASKMLENFVPPYDATVIAKLKAADAVLIGKTNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S G +PW K PGGSSGG++A +A + SIGTDTGGSIRQPASF G Sbjct: 134 ENSALGVTRNPWDL-----KCVPGGSSGGAAACLAASMAPLSIGTDTGGSIRQPASFCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+I+FA SLDQ G + RT D+AILL+AIAGYD D+T N+ P Y Sbjct: 189 VGLKPTYGVVSRFGLIAFASSLDQIGPMARTAEDAAILLEAIAGYDPHDSTSANVKTPAY 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +++ Q ++G+ +G+ KE+ D L +++ ++ I+ K GA + ++SLPH++Y + Sbjct: 249 SQSVKQPLKGLRLGVVKEHFGDGLDSEVEQATREAINVYKSLGATVTDVSLPHSKYGIAV 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILE---------------------------M 346 YYII+P+EASSNLAR+DG YG R +LE M Sbjct: 309 YYIIAPSEASSNLARFDGAHYGHRTNEAAMLEQLAQERAALEAAGDEVGLAKLDTSLVRM 368 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 Y +R+ GFG EVK RIM+GTY LS+ YD++YL+A K+R LI++D+ AF+ VD+++ Sbjct: 369 YRQSRAEGFGPEVKRRIMLGTYTLSAGYYDAYYLKALKVRRLIRQDYDAAFKD-VDLVIG 427 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PT PT +F G + ++ SM D++TV N+AG+ IS+P + +P+GLQL G Sbjct: 428 PTAPTPSFAAGTKTDDPLSM--YLGDLYTVTANLAGIGGISIPCGFSKAGLPIGLQLQGP 485 Query: 467 PFREETLFSVGQIIE 481 P EE L + + Sbjct: 486 PLAEERLLQAAHMFQ 500 >gi|116620200|ref|YP_822356.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Solibacter usitatus Ellin6076] gi|116223362|gb|ABJ82071.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Solibacter usitatus Ellin6076] Length = 477 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 214/476 (44%), Positives = 303/476 (63%), Gaps = 10/476 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + R L S++ SA EL ++ EN N + NAY+ ++A AAA D + G Sbjct: 6 LTIDRVRQGLFSREFSATELAAEALRFAENENPKTNAYLHFSPERALAAAGRVDAAVARG 65 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+ +KD T+G+ T S +L+ + P Y++T ++ + G V+LGK N D Sbjct: 66 EDPGALAGVPVAVKDVIVTQGVKTTCGSRLLEHYIPPYDATAVIRIEEAGGVILGKTNCD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S + PV +P + PGGSSGGS+AAVA S+G+DTGGSIR Sbjct: 126 EFAMGSSNENSAFRPVRNPV-----ALERVPGGSSGGSAAAVAQGTAVVSLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+ PTYGR SR G+ +FA SLD G R V+D+A LL+ +AG D D+T Sbjct: 181 QPASFCGIVGVTPTYGRVSRYGLTAFASSLDHIGPFARNVKDAATLLRVMAGRDLRDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PVPDY L+++++G+ +G+P EY L +L+ + +G+ LK G ++ EISLP Sbjct: 241 APAPVPDYSADLNKNVKGLKLGLPVEY-LRHLTSETGEPLNRGLEVLKALGCEVREISLP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 T YA+ YYII+ AEASSNLARYDGVRY R G+ + +MY NTR GFG E K RIM+ Sbjct: 300 ATDYAIACYYIIATAEASSNLARYDGVRYTTRSGGETLADMYRNTRGEGFGAECKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLS+ YD++YL+A+K+R LI RDF AF + VD I+ P +P AFPLG++ ++ + Sbjct: 360 GTYVLSAGYYDAYYLKAQKVRALIARDFANAFGE-VDAIVAPVSPFPAFPLGEKVDDPLA 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 M +D+FT+ ++AG+P +SVP +P+G+Q++ + F E T+F + E Sbjct: 419 M--YLSDIFTITGSLAGIPCMSVPCGNTAAGLPVGMQILTKHFDESTMFRLADAFE 472 >gi|330950289|gb|EGH50549.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae Cit 7] Length = 483 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/476 (46%), Positives = 311/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + EIS Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF VDVI+ PTTP A+ +G + N+ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAD-VDVIVGPTTPNPAWKIGAKTND 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|313893272|ref|ZP_07826847.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313442168|gb|EFR60585.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 486 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 220/475 (46%), Positives = 304/475 (64%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I ++AY+ +A A A+ D+ I G+A Sbjct: 4 IHELHKKLVNKEISAVELTNAIIAHKAKVEPTVHAYLSDSHDRALATAKTVDELIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y +TV ++L DN + LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDEPATCASKMLENFVPPYNATVIERLQDNHYISLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW + PGGSSGGS+AAVA ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTTNPWNT-----DCVPGGSSGGSAAAVASSTAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G ITR V D+A++L AI+GYD D+T + Sbjct: 179 ASFCGVVGLKPTYGNVSRYGLIAFASSLDQVGPITRDVTDAALVLNAISGYDSKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY AL ++ + +G+PKE+ + L+ + K ++ I K GA+IVE+SLP++ Sbjct: 239 GARVDYTTALVNDVKNLKIGVPKEFFGEGLNSEVRKAMEEAIETYKKLGAEIVEVSLPNS 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YG+RV +++EM TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGMRVAADNLVEMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R LIK +F EAF + VD+ILTPT P +++ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRLIKNEFDEAFSK-VDLILTPTAPNTSYKFGEKANDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+G+QL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSSNLPIGMQLLGPAMGEETLLRAAFTFEQ 470 >gi|238854173|ref|ZP_04644520.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus gasseri 202-4] gi|238833249|gb|EEQ25539.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus gasseri 202-4] Length = 479 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/475 (46%), Positives = 308/475 (64%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V A+ A ++ L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDDDAKPAEN------LDFAKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILYNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATRNPWDL-----EKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEKEVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ V +PKEY +D + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRVAVPKEY-MDAVDGEMRDAIQKQIDVLKDAGAVINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + FE+ DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFEEN-DVIVGPTTTEPAFGIGEEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E T+F V IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPAGLQIMAKRFDEGTVFKVADFIERNNKFYE 471 >gi|197302921|ref|ZP_03167972.1| hypothetical protein RUMLAC_01649 [Ruminococcus lactaris ATCC 29176] gi|197298002|gb|EDY32551.1| hypothetical protein RUMLAC_01649 [Ruminococcus lactaris ATCC 29176] Length = 498 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/476 (43%), Positives = 300/476 (63%), Gaps = 11/476 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L A+ R ++++ +++ E V + I+ + +N+Y+ + + A A A+E Sbjct: 3 MDLLKLTALELGR-KIKAGEVTVREAVRAVIEQAKEVEPTINSYVTLDEEVAYAQADEIQ 61 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K+I G+ L G+P+ IKD +G T S IL GF+P Y + + L + GAV+L Sbjct: 62 KKIDAGELTGPLAGVPVAIKDNMCIEGQLTTCSSKILSGFKPTYTAQAVENLKNAGAVIL 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETSYYGP +P + PGGSSGGS AAVA C ++G+D Sbjct: 122 GKTNMDEFAMGSTTETSYYGPTKNPHNTA-----HVPGGSSGGSCAAVAACECYYALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G VG+KPTYG SR G++++ SLDQ G + + V D A +L+ IA +D Sbjct: 177 TGGSIRQPSSFCGVVGLKPTYGTVSRYGLVAYGSSLDQIGPVAKDVADCAAILEVIASHD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E D+T + D+ AL + ++G+ +GIP++Y + L P +++ Q L++ GA + Sbjct: 237 EKDSTSIERDDCDFTEALVEDVKGLRIGIPRDYMGEGLDPEVNQAVMQAAKVLEEKGAVV 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 L +YA+PAYY I+ AEASSNL R+DGV+YG R E + + MY+ TRS GFG E Sbjct: 297 EAFDLGLVKYAIPAYYTIAAAEASSNLERFDGVKYGYRTKEYEGLHNMYKKTRSEGFGAE 356 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIKR+F FE+ D+IL P PT+A LGK Sbjct: 357 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKREFDRVFEK-YDLILGPAAPTTAPELGK 415 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ M D++T++VN+AGLP +S+P K +P+G+QLIG F E+TL Sbjct: 416 SLDD--PMKMYLGDIYTISVNLAGLPGMSIPVGKDSKGLPVGMQLIGNVFDEKTLI 469 >gi|227551666|ref|ZP_03981715.1| possible amidase [Enterococcus faecium TX1330] gi|257895734|ref|ZP_05675387.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium Com12] gi|293377657|ref|ZP_06623846.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium PC4.1] gi|293571850|ref|ZP_06682866.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium E980] gi|227179229|gb|EEI60201.1| possible amidase [Enterococcus faecium TX1330] gi|257832299|gb|EEV58720.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium Com12] gi|291608104|gb|EFF37410.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus faecium E980] gi|292643657|gb|EFF61778.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Enterococcus faecium PC4.1] Length = 490 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/483 (45%), Positives = 318/483 (65%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTKIHNRSLEELHRMLVSKEITVQDLTKATFERIKETEPEIEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNILAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I+GM + +PKEY + ++ + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDIKGMKIALPKEYLGEGVASGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|148652230|ref|YP_001279323.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Psychrobacter sp. PRwf-1] gi|172048469|sp|A5WCI2|GATA_PSYWF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148571314|gb|ABQ93373.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Psychrobacter sp. PRwf-1] Length = 499 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/496 (43%), Positives = 316/496 (63%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+ +++++ D L+++ S+VEL D +++ I + ++N++I + + AR AA+++D Sbjct: 1 MSDLHHLSIAKLVDGLQNQHFSSVELTDHFLKRINTLDKKVNSFITIDEEGARQAAQQAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R GD L G+P+ KD F TKG+ T + S IL F Y++T+ + + GAV LG Sbjct: 61 DRRSAGDNSVLLGLPMAHKDLFCTKGLLTTSGSKILHNFVSPYDATIVSNIREAGAVCLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SYYG V +PW PGGSSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYYGAVHNPWDL-----SRVPGGSSGGSAAAVAAGFVPFATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG R+ +D A LL+ +AG+D Sbjct: 176 GGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGTFGRSAQDCAYLLQPMAGHDA 235 Query: 241 CDATCVNLPVPDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 DAT + VPDY L D+ G+ +G+ KEY L +D + + Sbjct: 236 RDATSIKRDVPDYVADLQSAAAQADADKPFSGLRIGVAKEYFGKGLDAEVDANVRAALKQ 295 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENT 350 ++ GA IVE+++ + L YY+++PAEASSNL+R+DGVR+G R E KD+ ++Y + Sbjct: 296 YEELGATIVEVNITDPEITLATYYMLAPAEASSNLSRFDGVRFGYRCEDPKDLADLYTRS 355 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 RS GFG EV+ RI++GTY LS+ +D++Y +A+K+R LI +DF AFE+ DVI +PT P Sbjct: 356 RSEGFGVEVQRRILMGTYALSAGYFDAYYTKAQKVRRLILQDFKNAFEK-CDVIASPTAP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+A+ L + + DV+T+ VN+AGLPAIS+PA E +P+GLQLIG + + Sbjct: 415 TAAYKLDAALD---PVTMYLGDVYTIGVNLAGLPAISMPAGFTESGLPIGLQLIGNHWDD 471 Query: 471 ETLFSVGQIIEKEAGY 486 L S I ++ + Sbjct: 472 SKLLSTAHIFQQHTDH 487 >gi|259501111|ref|ZP_05744013.1| glutamyl-tRNA(Gln) amidotransferase [Lactobacillus iners DSM 13335] gi|302190441|ref|ZP_07266695.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners AB-1] gi|312875422|ref|ZP_07735426.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 2053A-b] gi|259167805|gb|EEW52300.1| glutamyl-tRNA(Gln) amidotransferase [Lactobacillus iners DSM 13335] gi|311089085|gb|EFQ47525.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus iners LEAF 2053A-b] Length = 479 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/474 (43%), Positives = 302/474 (63%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++K+I+A +L + I+ ++NA I V+ AE D + +L GI Sbjct: 14 KLKNKEITAEQLTQDTLAKIKELEPKLNAMITVIDDAK--PAENLDF------SNELAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T + T A SHIL + P Y++TV KL ++GK NMDEFAMGSS+E Sbjct: 66 PIAVKDNIITNNVKTTAASHILYNYVPVYDATVVSKLKAAKMTIIGKTNMDEFAMGSSSE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW T + G ++ + V A++GTDTGGSIRQPA+F G Sbjct: 126 NSYFGAPKNPWDLTKVTGGSSGGSAAAVAGGEVI-----AALGTDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L ++G D+ DAT VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVQDSAKILNVLSGADDHDATVSEREVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL+Q ++G+ V +P+EY + +S + ++ I L+D GA I ++SLPHT+Y +P Y Sbjct: 241 KALNQDVKGLRVAVPEEYFGEGISEKVKALIKEQIKVLEDHGAIINKVSLPHTKYVIPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRFDGIRYGYRSKDAKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI RDF + FE+ DVI+ PTTPT AF L + + M ND+ Sbjct: 361 SYDRFFRQAAKVRTLICRDFEKIFEEN-DVIVGPTTPTPAFGLNSKTKDPLEM--YANDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T+A N+AG+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTIAANLAGVPAASVPAGLVD-GMPVGLQIMAKRFDEESIFRVADFIERSNKFY 470 >gi|225405474|ref|ZP_03760663.1| hypothetical protein CLOSTASPAR_04694 [Clostridium asparagiforme DSM 15981] gi|225042996|gb|EEG53242.1| hypothetical protein CLOSTASPAR_04694 [Clostridium asparagiforme DSM 15981] Length = 499 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 211/491 (42%), Positives = 304/491 (61%), Gaps = 17/491 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ A+ R ++R+ +S E V + ++ I +NA++ V +A A +RI Sbjct: 5 LDLTALELGR-QIRAGAVSVPEAVQAALERIAQVEPDLNAFVTVDGDRAMEQAGRVQRRI 63 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+ L G+P+ +KD TKG+ T S IL+ F P Y + +KL + GAV+LGK Sbjct: 64 ESGELTGPLAGVPVAVKDNLCTKGLKTTCSSRILENFVPAYTAQAVRKLEEAGAVILGKT 123 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGS+ ETSY+G +PW PGGSSGGS AAVA C ++G+DTGG Sbjct: 124 NMDEFAMGSTTETSYFGQTRNPWNR-----DHVPGGSSGGSCAAVAAGECFLALGSDTGG 178 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQP+SF G GIKPTYG SR G+I++ SLDQ G + + D A L+AI+G+D D Sbjct: 179 SIRQPSSFCGVTGIKPTYGTVSRWGLIAYGSSLDQVGPVAGNISDCAAALEAISGHDPRD 238 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++ D+ AL I+G+ VG+P++Y + L P + K + L++ GA + E Sbjct: 239 STSMDRKDCDFTAALQDDIRGLRVGLPRDYFGEGLDPEVQKAVLEAAQTLREKGASVEEF 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 L +YA+PAYY+I+ AEASSNL+R+DGV+YG R + +D+ MY+ TRS GFG EVK Sbjct: 299 DLGLVEYAIPAYYVIASAEASSNLSRFDGVKYGYRTPDYEDLHGMYKRTRSEGFGPEVKR 358 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+G++VLSS YD++YL+A + + LIK +F +AF++ DVIL PT P +A LG + Sbjct: 359 RIMLGSFVLSSGYYDAYYLKALRTKALIKAEFDKAFKR-FDVILGPTAPGTAPLLGSSLS 417 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M D++T++ N+AGLPA+S+P L K +P+G+QL G FRE+ +II Sbjct: 418 DPLKM--YLGDIYTISANLAGLPAVSLPCGLDSKGLPIGVQLTGDCFREK------EIIR 469 Query: 482 KEAGYFRPHKW 492 Y R W Sbjct: 470 AAYAYERTRTW 480 >gi|20093308|ref|NP_619383.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina acetivorans C2A] gi|23821598|sp|Q8THJ1|GATA_METAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|19918666|gb|AAM07863.1| glutamyl-tRNA (Gln) amidotransferase, subunit A [Methanosarcina acetivorans C2A] Length = 476 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 205/481 (42%), Positives = 307/481 (63%), Gaps = 18/481 (3%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 +M+V++ +D++ K+ SA E+ Y++ IE S ++N YI V + A E++ K + Sbjct: 5 WMSVAQVKDKI--KESSAEEVTAGYLEVIEKS--KINGYITV----SDKALEQAKKIDVE 56 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G+PI IKD + G+ S IL+G+ P + + V +KL D GAV+LGK N+D Sbjct: 57 GHEGPLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPFNAHVIEKLLDAGAVILGKTNLD 116 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETSYYGP +PW + PGGSSGGS+A VA ++G+DTGGS+R Sbjct: 117 EFAMGSSTETSYYGPTANPWDL-----ERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVR 171 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G VG+KPTYG SR G++++A SL+Q G + V D AIL+ IAGYD D+T Sbjct: 172 CPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAGYDRRDSTS 231 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ +Y++AL ++G+ +G+PKE+ + + P ++K I + GA E+S+P Sbjct: 232 IDSKT-EYQKALVDDVKGLKIGVPKEFFGEGIHPGVEKAVWNAIHKFESLGATRQEVSMP 290 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + YAL +YYII+ +EASSNLAR+DG RYG R G++ M TR+ GFG EVK RI++ Sbjct: 291 NINYALASYYIIAMSEASSNLARFDGTRYGFRANGENWHAMVSKTRAEGFGTEVKRRILL 350 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ +D +YL+A K+RTL+K+DF +A VD+++ PT P AF +G++ + + Sbjct: 351 GTYALSAGYHDKYYLKALKVRTLVKQDFDKALST-VDLLMAPTMPNPAFRIGEKIEDPLT 409 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + +DV T +N+AG+P++SVP + +P+GLQ++G+PF E T+ EK Sbjct: 410 L--YLSDVNTCPINLAGVPSVSVPCGFTD-GLPVGLQIMGKPFDEPTVLRAAYTFEKNTD 466 Query: 486 Y 486 Y Sbjct: 467 Y 467 >gi|118404870|ref|NP_001072779.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Xenopus (Silurana) tropicalis] gi|123914819|sp|Q0VFI5|QRSL1_XENTR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|110645405|gb|AAI18817.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Xenopus (Silurana) tropicalis] Length = 524 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/500 (42%), Positives = 297/500 (59%), Gaps = 24/500 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++ E+ LR I EL + I+ + S +NAYI V A A E+D+R I G Sbjct: 4 MSLREAAAALRLGQIKPTELCQKCLSFIKET-SFLNAYITVTEDFALKQAAEADERFIQG 62 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 DL+GIPI IKD F+T GI T S +L G+ Y +TV QKL+D GAV +GK N+D Sbjct: 63 KPLGDLDGIPIAIKDNFSTAGIETTCASRMLKGYIAPYNATVVQKLFDQGAVFMGKTNLD 122 Query: 126 EFAMGSSNETSYYGPVISPWR---------------SMDSTDKFTPGGSSGGSSAAVAGF 170 EFAMGS + S +GPV +PW + D +D GGSSGGS+ AV+ Sbjct: 123 EFAMGSGSTDSIFGPVKNPWSYSRSYIDKTSLSHHAAKDDSDWVITGGSSGGSACAVSAG 182 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 C +IG+DTGGS R PAS G VG+KPTYG SR G+I S+D GI+TR V D+A Sbjct: 183 TCYLAIGSDTGGSTRNPASHCGVVGLKPTYGLVSRHGLIPLVNSMDVPGIVTRCVDDAAT 242 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +L +AG+D D+T + P + ++ + +GIPKEY LS I W + Sbjct: 243 VLGVLAGHDPYDSTTIQDPFQPFSLPEKVDVRNVCIGIPKEYHAPGLSAEILSLWSETAD 302 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYEN 349 L++AGAK+VE+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R + D E +Y Sbjct: 303 LLENAGAKVVEVSLPHTPYSIVCYHVLCTAEVASNMARFDGLEYGHRSDIDDSTEALYAA 362 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GF + V+ RI+ G Y L R Y+ ++++A+K+R LI DF + F GV V+LTPTT Sbjct: 363 TRREGFNEVVRGRILSGNYFLLKRNYEKYFVKAQKVRRLIADDFVKVFNSGVHVLLTPTT 422 Query: 410 PTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A P +E+N + S DVFT NMAGLPA++VPAAL + +PLGLQ IG+ Sbjct: 423 LGDAAPYLEFIQEDNRTRSA---QEDVFTQCANMAGLPAVTVPAALSSRGLPLGLQFIGR 479 Query: 467 PFREETLFSVGQIIEKEAGY 486 F E+ L ++ + EK+ + Sbjct: 480 AFCEQQLLTIAKWFEKQIDF 499 >gi|227530248|ref|ZP_03960297.1| possible amidase [Lactobacillus vaginalis ATCC 49540] gi|227349837|gb|EEJ40128.1| possible amidase [Lactobacillus vaginalis ATCC 49540] Length = 490 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/478 (46%), Positives = 314/478 (65%), Gaps = 14/478 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +S+ D L++K ISA EL I+ + Q+ A+I + + A A E D++ I+ D Sbjct: 8 LSQLHDDLKNKKISATELTKETFDHIKKNEDQVKAFITLNEEAAMKKAAEIDQQGISEDQ 67 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 GIP+ +KD TKG+ T A S IL+ F P Y++TV +KL +NG + +GK N+DEFA Sbjct: 68 L-TSGIPLAVKDNILTKGLKTTAASKILENFNPVYDATVVEKLNNNGFINVGKTNLDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + +PW D T PGGSSGGS+AAVA ++GTDTGGSIR PA Sbjct: 127 MGSSTENSAFFTTHNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR GII+F S DQ G +TRTV+D+A+L + I+G DE D T Sbjct: 182 SFNGIVGMKPTYGRVSRWGIIAFGSSFDQVGWLTRTVKDNALLTQMISGNDEHDMTSSLK 241 Query: 249 PVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 VP++ L D +++G+ + +PKEY + ++ + + + + L+ GA I E+SLPH Sbjct: 242 EVPNWAAQLNDDTNVKGLRIAVPKEY-FEGINDDVHEVIKNALDHLESLGAVIDEVSLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 T+Y +PAYYI++ +EASSNL RYDG+RYG R + K+I ++Y +R+ GFG+EVK RIM+ Sbjct: 301 TKYGVPAYYILASSEASSNLQRYDGIRYGFRAKDVKNIEDVYVRSRTEGFGEEVKRRIML 360 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LS+ YD+++ +A K+R LI +DF F+ DVIL T ++AF +G E ++ + Sbjct: 361 GTFSLSAGFYDAYFNKAAKVRRLIAQDFDNVFKDH-DVILGATGASTAFKIGAEIDDPQT 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 M NDV TV VNMAGLPA+SVPA K MP+GLQ+IG+PF E+T+++ + E+ Sbjct: 420 M--YMNDVLTVPVNMAGLPAMSVPAGFSAKNGMPVGLQIIGKPFDEQTVYNTAYVFEQ 475 >gi|257884414|ref|ZP_05664067.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,501] gi|257820252|gb|EEV47400.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Enterococcus faecium 1,231,501] Length = 490 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/483 (45%), Positives = 317/483 (65%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ ++ E L SK+I+ +L + + I+ + ++ A+I + +KA A+ D Sbjct: 1 MTKIHNRSLEELHRMLVSKEITVQDLTKATFERIKETEPEIEAFITLNEEKALEQAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I+ ++ L GIPIGIKD TK I T A S IL F P Y++TV K++ + +G Sbjct: 61 EKGID-ESNILAGIPIGIKDNIVTKDILTTAASKILYNFEPIYDATVMDKIYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG S ETSY+ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSAAAVAAGQIPVSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A+ L AI+GYDE Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRTVKDNALALTAISGYDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + VPD+ L I GM + +PKEY + ++ + + + + GA + Sbjct: 235 KDGTSSGVSVPDFAEGLTGDINGMKIALPKEYLGEGVASGVKEAVLKAAETFRSLGAVVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVKSLDDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIKRDF + F D+I+ P++PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKRDFEKVFAD-YDLIIGPSSPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M +D+ T+ VN+AGLP +SVPA L E +P+GLQ+IG F E+T++ Sbjct: 414 INDPITM--YMSDILTIPVNLAGLPGMSVPAGLSE-GLPVGLQIIGNYFDEKTMYQAAYA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|225869154|ref|YP_002745102.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus equi subsp. zooepidemicus] gi|259647226|sp|C0ME97|GATA_STRS7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225702430|emb|CAX00309.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus equi subsp. zooepidemicus] Length = 488 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L +KDISAVEL + ++ I+ + ++I + + A A D + Sbjct: 3 FNHHTIEELHELLVAKDISAVELTKATLEDIKAREEAVGSFITIACEAALKQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T +D +++GK N Sbjct: 63 IDPD-NVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVANAYDKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWDH-----SRVPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TVR++A LL IAG D D+ Sbjct: 177 IRQPAAFNGVVGLKPTYGAVSRYGLIAFGSSLDQIGPFAPTVRENAQLLSVIAGSDRKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + Q I+GM + +PKEY + + P I +T + GA I E+S Sbjct: 237 TSAPVQIADYTSKIGQDIKGMKIALPKEYLGEGIDPKIKETILAAAQHFEKLGAIIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K + ++Y TRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAADAKSLEDIYVKTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PT PT+AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPTAAFEL--DTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLPAIS+PA + +P+GLQLIG + EE ++ V E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPAISIPAGFAD-GLPVGLQLIGPKYSEEVIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|307326511|ref|ZP_07605706.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces violaceusniger Tu 4113] gi|306887919|gb|EFN18910.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces violaceusniger Tu 4113] Length = 497 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/487 (45%), Positives = 325/487 (66%), Gaps = 14/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E R+ S +++AVE+ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDLTRLTAAEIAARIASGEVTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F TKGI T S IL+G+ P Y++TVTQ+L D ++L Sbjct: 61 EKRERGEELGPLAGVPLALKDIFTTKGIPTTVGSKILEGWIPPYDATVTQRLRDADVIIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +GP +PW D T PGGS GGSSA++A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAFGPTGNPW---DLTR--IPGGSGGGSSASLASFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S++GM +G+ KE+ + + + + + + L++ GA+ Sbjct: 236 PMDSTSIDEPVPAVVEAARNGSVRGMRIGVVKEFAGEGYQAGVMQRFNESVELLRELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGF 355 I EIS P AL AYY+I+P+E SSNLAR+D +RYGLRV +G K E+ TR+ GF Sbjct: 296 IEEISCPSFDKALAAYYLIAPSECSSNLARFDAMRYGLRVGDDGTKSAEEVTALTRAEGF 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK R+M+GTY LSS YD++Y A+K+RTLIKRDF +AFE+ VDV+++PTTPT+AFP Sbjct: 356 GAEVKRRVMLGTYALSSGYYDAYYGSAQKVRTLIKRDFEKAFER-VDVLISPTTPTTAFP 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I ++ L+ Sbjct: 415 IGERADD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMADDRLY 472 Query: 475 SVGQIIE 481 VG +E Sbjct: 473 KVGAAVE 479 >gi|226951650|ref|ZP_03822114.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter sp. ATCC 27244] gi|226837631|gb|EEH70014.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter sp. ATCC 27244] Length = 492 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/479 (46%), Positives = 320/479 (66%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L+ S+ EL + Y++ I ++++ +Y+ V A++A A+ +D Sbjct: 1 MTDLHRLSIRELSEGLKQAQFSSRELTEHYLKRIAKIDAKVKSYVTVTAEQALVEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I +G+A L GIP+ KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AAIKSGNAHALAGIPLAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKAKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY+G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYFGATGNPW-ALD----HVPGGSSGGSAAAVAADLAPIATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQ G + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V+ V DY L+ +++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVDKEVDDYVANLNGTAVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E KDIL++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPKDILDLYKRSRSEGFGA 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|315303632|ref|ZP_07874167.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria ivanovii FSL F6-596] gi|313627995|gb|EFR96593.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria ivanovii FSL F6-596] Length = 483 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/483 (45%), Positives = 307/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIEAVEDKVGSFITLNKETALGVAEELGDAGIDS 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGLPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y+ TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYKKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N++G+PAISVP + +P+GLQ+IG F E L+ V E+ Sbjct: 419 M--YSNDILTVPINLSGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQATT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|329731495|gb|EGG67858.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus 21193] Length = 485 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 215/464 (46%), Positives = 310/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + K Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKKAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|325570047|ref|ZP_08145972.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus ATCC 12755] gi|325156875|gb|EGC69046.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus ATCC 12755] Length = 490 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/487 (44%), Positives = 314/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ E L SK+I+A +L I+ + +++A++ + +KA A A+ D Sbjct: 1 MTELYNKSLEELHSLLVSKEITATDLTSETFARIKETEPKVDAFLALNEEKAHALAQAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I ++ L GIPIGIKD TK + T A S IL F P Y++TV K++ + +G Sbjct: 61 QKGIT-ESNVLAGIPIGIKDNIVTKDLRTTAASKILGNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG+S ETS++ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGASTETSFFKKTKNAW---DETK--VPGGSSGGSAAAVAAGQIPLSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+AI L AI+G+D Sbjct: 175 GGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPMTRGVKDNAIALNAISGFDA 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPD+ L I+GM V +PKEY + + + + + + GA + Sbjct: 235 KDSTSAGAAVPDFTAGLTGDIKGMKVALPKEYLGEGIQAGVREAILKAADTFRALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRSENVSNLEDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIK+DF + F Q D+I+ P +PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKQDFDKVFSQ-YDLIIGPASPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YLNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEATMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|289550382|ref|YP_003471286.1| Aspartyl-tRNA(Asn) amidotransferase subunit A/Glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus lugdunensis HKU09-01] gi|315660152|ref|ZP_07913009.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus lugdunensis M23590] gi|289179914|gb|ADC87159.1| Aspartyl-tRNA(Asn) amidotransferase subunit A/Glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus lugdunensis HKU09-01] gi|315494833|gb|EFU83171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus lugdunensis M23590] Length = 485 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/476 (45%), Positives = 315/476 (66%), Gaps = 13/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + ++ + ++ K + ++V AIE ++ + +++ + + A A+E D + Sbjct: 3 IRYESIENLQQLIKDKKVKPSDIVKDIYDAIEETDPTIKSFLTLDKENAVKKAQELD-HL 61 Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + D D L GIP+GIKD T+G+ T S +L+GF P YESTV KL AV++GK Sbjct: 62 QDKDQMDGKLFGIPMGIKDNIITEGVETTCASKMLEGFVPIYESTVMNKLKHENAVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMG S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTG Sbjct: 122 LNMDEFAMGGSTETSYFKKTVNPF---DHT--AVPGGSSGGSAAAVAAGLVPFSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A++L+AI+G D Sbjct: 177 GSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDAH 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + D+ + + I+G+ V +PKEY + +S + + + + LK GA++ E Sbjct: 237 DSTSAPVDDVDFTSDIGKDIKGLKVALPKEYLGEGVSEDVKSSVKNAVETLKSLGAEVEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP+T+Y +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG EVK Sbjct: 297 VSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQTLEELYKMSRSEGFGAEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI +GT+ LSS YD++Y +++K+RTLIK DF FE DVI+ PT PT+AF LG E Sbjct: 357 RRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDRVFED-YDVIVGPTAPTTAFNLGDEL 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ +M ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 416 DDPLTM--YANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|49484141|ref|YP_041365.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MRSA252] gi|257426032|ref|ZP_05602454.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 55/2053] gi|257428705|ref|ZP_05605100.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 65-1322] gi|257431315|ref|ZP_05607691.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 68-397] gi|257434033|ref|ZP_05610384.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus E1410] gi|257436937|ref|ZP_05612979.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus M876] gi|282904531|ref|ZP_06312416.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus C160] gi|282906304|ref|ZP_06314156.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus Btn1260] gi|282909220|ref|ZP_06317036.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911525|ref|ZP_06319325.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus WBG10049] gi|282914698|ref|ZP_06322483.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus M899] gi|282919735|ref|ZP_06327467.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus C427] gi|282925139|ref|ZP_06332799.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus C101] gi|283958661|ref|ZP_06376107.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|293507775|ref|ZP_06667617.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 58-424] gi|293510277|ref|ZP_06668983.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus M809] gi|293539332|ref|ZP_06672011.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus M1015] gi|295428482|ref|ZP_06821109.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590046|ref|ZP_06948686.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus MN8] gi|56749014|sp|Q6GFF7|GATA_STAAR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|49242270|emb|CAG40977.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MRSA252] gi|257271175|gb|EEV03332.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 55/2053] gi|257274349|gb|EEV05861.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 65-1322] gi|257277964|gb|EEV08620.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 68-397] gi|257280959|gb|EEV11103.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus E1410] gi|257283726|gb|EEV13851.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus M876] gi|282313097|gb|EFB43495.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus C101] gi|282316373|gb|EFB46750.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus C427] gi|282321412|gb|EFB51738.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus M899] gi|282324534|gb|EFB54846.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus WBG10049] gi|282326788|gb|EFB57085.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330501|gb|EFB60018.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus Btn1260] gi|282595087|gb|EFC00054.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus C160] gi|283471171|emb|CAQ50382.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Staphylococcus aureus subsp. aureus ST398] gi|283789701|gb|EFC28523.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|290919867|gb|EFD96936.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus M1015] gi|291094838|gb|EFE25106.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus 58-424] gi|291466641|gb|EFF09161.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus M809] gi|295127464|gb|EFG57103.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577174|gb|EFH95888.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus MN8] gi|312437633|gb|ADQ76704.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus TCH60] gi|315193430|gb|EFU23827.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus CGS00] Length = 485 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 311/464 (67%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADANDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|163782808|ref|ZP_02177804.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenivirga sp. 128-5-R1-1] gi|159881929|gb|EDP75437.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenivirga sp. 128-5-R1-1] Length = 480 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/462 (46%), Positives = 305/462 (66%), Gaps = 13/462 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ ++ E V+S+ + E++ ++ A+I + ++ A+E +K G L G+P Sbjct: 14 MKKGELKPTEAVESFFKRFEDTEEKVKAFITPLYEEGIERAKELEKGKPEGK---LFGLP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD K T S IL+ F Y++TV ++L GA+ +GK NMDEFAMGSS E Sbjct: 71 VAVKDNILIKDGRTTCASRILENFVSPYDATVIERLRREGAIFVGKTNMDEFAMGSSTEH 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + P +PW D+ PGGSSGGS+A+VA ++G+DTGGSIRQPASF G +G Sbjct: 131 SAFFPTRNPW----DRDR-VPGGSSGGSAASVAVGSSPVALGSDTGGSIRQPASFCGVIG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYGR SR G+++FA SLDQ G+ R D A+LL+ I+G+D D+T +PVP++ + Sbjct: 186 IKPTYGRVSRYGLVAFASSLDQIGVFARRTEDVALLLEVISGHDPKDSTSARVPVPEFGK 245 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L + I+G+ +G+PKE+ + + + +Q + L+ G + VE+SLPH +YA+PAYY Sbjct: 246 ELGKEIKGLRIGLPKEFFEFEVQDEVRERFQGFVDELESLGCEFVEVSLPHIKYAIPAYY 305 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I++P+EASSNLARYDGVRYG R E +D+LEMY TR GFG EVK RIM+GT+ LS+ Sbjct: 306 IVAPSEASSNLARYDGVRYGHRAEKYRDLLEMYSKTRDEGFGAEVKRRIMLGTFALSAGY 365 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+K+R LI DF +AFE+ VD+I +PTTPT F LG+ N M +DV Sbjct: 366 YDAYYLKAQKVRRLIYDDFMKAFER-VDLIASPTTPTLPFKLGERLENPIEM--YLSDVL 422 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 TV VN+AGLP ISVP + + +P+G QLIG+P+ E TL V Sbjct: 423 TVPVNLAGLPGISVPIGMAQ-GLPVGGQLIGKPWDEATLLRV 463 >gi|291525652|emb|CBK91239.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Eubacterium rectale DSM 17629] Length = 503 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 210/484 (43%), Positives = 302/484 (62%), Gaps = 11/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ AV E ++++K+++ E V + I +I+ ++N+++ + + A A E Sbjct: 1 MDLMSLTAV-ELGKKIQAKEVTVEEAVKAAIASIKAKEEKINSFVTIDEEGALKKAAEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +I G+ + L G+P+ IKD T+G+ T S IL F P Y + ++L D G V++ Sbjct: 60 AKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKILYNFIPTYTAEAVKRLEDAGCVIV 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +G +PW + + PGGSSGGS AAVA ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGATKNPWNT-----EHVPGGSSGGSCAAVAAEEVPFALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G I + V D A +L+AIA YD Sbjct: 175 TGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILEAIASYD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T VN + AL ++GM +GIP++Y D L P + LK GA + Sbjct: 235 TKDSTSVNRDDLKFTEALVDDVKGMKIGIPRDYLGDGLDPEVKSAILAAADELKKKGAVV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E D+ MY+ +RS GFG E Sbjct: 295 EEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTKEYTDLHNMYKKSRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A +++ LIK+ F +AF + DVIL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRVKALIKKAFDDAFAK-YDVILGPAAPTTAPKLG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E+ S + D++T++VN+AGLP IS+P + + +P+GLQLIG F+E+ + Sbjct: 413 -ESLSDPIQMYLGDIYTISVNLAGLPGISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAY 471 Query: 479 IIEK 482 EK Sbjct: 472 SFEK 475 >gi|116630133|ref|YP_815305.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Lactobacillus gasseri ATCC 33323] gi|282851214|ref|ZP_06260579.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus gasseri 224-1] gi|311110270|ref|ZP_07711667.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus gasseri MV-22] gi|122272930|sp|Q041K5|GATA_LACGA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116095715|gb|ABJ60867.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus gasseri ATCC 33323] gi|282557182|gb|EFB62779.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus gasseri 224-1] gi|311065424|gb|EFQ45764.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus gasseri MV-22] Length = 479 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/475 (46%), Positives = 308/475 (64%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V A+ A ++ L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDDDAKPAEN------LDFAKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILCNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATRNPWDL-----EKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEKEVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ V +PKEY +D + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRVAVPKEY-MDAVDGEMRDAIQKQIDVLKDAGAVINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + FE+ DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFEEN-DVIVGPTTTEPAFGIGEEISDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E T+F V IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPAGLQIMAKRFDEGTVFKVADFIERNNKFYE 471 >gi|291520975|emb|CBK79268.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coprococcus catus GD/7] Length = 490 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/490 (43%), Positives = 314/490 (64%), Gaps = 11/490 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + E R+++ +++ E V + ++ I+ +S N Y+ V+ ++A A E K+ Sbjct: 2 EITALTALELGKRIKAGEVTVEEAVKAQLEKIKERDSVYNCYVTVMEEEALKRAAEVQKQ 61 Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+ +D L G+P+ IKD TKG+ T S IL+ F+P Y++TV +KL GAV++G Sbjct: 62 IDAGELKDSPLAGVPVAIKDNICTKGVLTTCSSKILNNFKPPYDATVIEKLEAAGAVIIG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS+ ETSY+GP +PW + PGGSSGG++AAVA ++G+DT Sbjct: 122 KLNMDEFAMGSTTETSYFGPTKNPWNI-----ERVPGGSSGGAAAAVAAEEVWYALGSDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP+SF G G+KPTYG SR G+I++A SLDQ G I R V D A + +AIAGYD Sbjct: 177 GGSIRQPSSFCGVTGLKPTYGSVSRYGLIAYASSLDQIGPIARNVSDCAAVFEAIAGYDV 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V + + AL ++G+ +GIPK Y + L P + + L+ GA + Sbjct: 237 KDSTSVKMDDYHFTEALVDDVKGLRIGIPKGYLGEGLDPEVKEAVLAAAKTLEAKGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 + YA+PAYY+I+ AEASSNL+R+DGV+YG R + +D+ ++Y+ TR GFG EV Sbjct: 297 MFDMDMVDYAIPAYYVIASAEASSNLSRFDGVKYGYRTPDFEDLQDVYKKTRDEGFGMEV 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K R+MIG +VLSS YD++Y++A +++ LIK+ F +AF + D+IL PT PT+A +G Sbjct: 357 KRRMMIGAFVLSSGYYDAYYIKALQVKALIKKGFDDAFAK-YDIILGPTAPTTALKMG-- 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 EN S + D++TV+VN+AGLP IS+P + +P+G+Q+IGQ F E+TL Sbjct: 414 ENLSDPLKMYLGDIYTVSVNLAGLPGISLPCGIDSSGLPIGVQMIGQAFSEKTLIRAAYS 473 Query: 480 IEKEAGYFRP 489 +E+ Y RP Sbjct: 474 LEQTRSYERP 483 >gi|146305889|ref|YP_001186354.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas mendocina ymp] gi|166217702|sp|A4XQK6|GATA_PSEMY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|145574090|gb|ABP83622.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pseudomonas mendocina ymp] Length = 483 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/473 (47%), Positives = 306/473 (64%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L +K SA EL + + I + Q+N++I V A A+ +D R G Sbjct: 4 MTLAEIAKGLEAKQFSAEELSRALLARIAQLDPQLNSFITVTEDLAIEQAKAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G PI KD F T G+ T S IL GF+ Y++TV +KL G V LGKLNMDE Sbjct: 64 ENGALLGAPIAHKDLFCTNGVLTSCGSKILTGFKAPYDATVVEKLKAAGTVTLGKLNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSANESSHYGAVKNPWDT-----SRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ T GIKPTYGR SR G+I++A SLDQ G + R D A+LL A+AG+D D+T V Sbjct: 179 PAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARDAFDCALLLGAMAGFDAKDSTSV 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PV DY AL Q + G+ +G+PKEY L I + + LK GA + +ISLP+ Sbjct: 239 DQPVDDYLAALAQPLAGLRIGLPKEYFGAGLDARIGEKVMAVVEELKKLGATVKDISLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMI 365 Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E LE +Y+ +R GFG EVK RIM+ Sbjct: 299 MQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPVNLEDLYKRSRGEGFGAEVKRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++Y++A++IR LIK DF AF+ VDVIL PTTP A+ LG E N+ Sbjct: 359 GTYALSAGYYDAYYIKAQQIRRLIKNDFVAAFKD-VDVILGPTTPNLAWKLG--EKNADP 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AG+P +S+PA + +P+G+QL+G F+E L +V Sbjct: 416 VSAYLEDIYTITANLAGIPGLSMPAGFVD-GLPVGVQLLGNYFQEGRLLNVAH 467 >gi|225375174|ref|ZP_03752395.1| hypothetical protein ROSEINA2194_00798 [Roseburia inulinivorans DSM 16841] gi|225212984|gb|EEG95338.1| hypothetical protein ROSEINA2194_00798 [Roseburia inulinivorans DSM 16841] Length = 482 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 208/474 (43%), Positives = 296/474 (62%), Gaps = 10/474 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 ++++K+++ E V + + AIE ++N+++ V + A AEE K I +G L G Sbjct: 11 KIKAKEVTVTEAVTAALDAIEAKEKKVNSFVTVDREGALKRAEEVQKMIDDGTLTGPLAG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD TK + T S IL F+P Y + + L GAV++GK NMDEFAMGS+ Sbjct: 71 VPVAIKDNMCTKDLLTTCSSKILYNFKPTYTAEAVENLEKAGAVIIGKTNMDEFAMGSTT 130 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETS YG +PW + PGGSSGGS AAVA C+ ++G+DTGGSIRQP+SF G Sbjct: 131 ETSAYGATKNPWN-----EAHVPGGSSGGSCAAVAAEECSYALGSDTGGSIRQPSSFCGV 185 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 GIKPTYG SR G+I++ SLDQ G I + V D A +L+AIA YD+ D+T + + Sbjct: 186 TGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILEAIASYDKKDSTSIARDDLKF 245 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 AL ++G+ +GIP++Y + L P + + L++ GA + E L +YA+PA Sbjct: 246 TDALVDDVKGLKIGIPRDYFGEGLDPEVKEAVLNAAKVLEEKGAVVEEFDLSLVEYAIPA 305 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ AEASSNLAR+DGV+YG R E + + MY+ TRS GFG EVK RIM+G++VLSS Sbjct: 306 YYVIACAEASSNLARFDGVKYGYRAKEYEGLHNMYKKTRSEGFGTEVKRRIMLGSFVLSS 365 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++YL+A + + LIK+ F EAF + DVIL P PT+A LG E+ S + D Sbjct: 366 GYYDAYYLKALRTKALIKKAFDEAFAK-YDVILGPAAPTTAPKLG--ESLSDPIKMYLGD 422 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ++T++VN+AGLP IS+P +P+GLQLIG F+E+ + E+ Y Sbjct: 423 IYTISVNLAGLPGISLPCGKDSNGLPIGLQLIGDCFKEKKIIRAAYAFEQTREY 476 >gi|134102610|ref|YP_001108271.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Saccharopolyspora erythraea NRRL 2338] gi|291004705|ref|ZP_06562678.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Saccharopolyspora erythraea NRRL 2338] gi|133915233|emb|CAM05346.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Saccharopolyspora erythraea NRRL 2338] Length = 509 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/489 (45%), Positives = 318/489 (65%), Gaps = 17/489 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E RL + ++S+VE+ +++ I ++A++ V + A AAA ++D+ Sbjct: 8 SELTGLTAAELAGRLSAGEVSSVEVTQAHLDRIAAVEPVVHAFLHVDSDGALAAARKADE 67 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R A L G+P+ +KD AT + T S +L+ + P Y++TVT++L + G V+LG Sbjct: 68 DRAAGRAASPLAGVPLALKDVLATSDMPTTCGSKMLENWTPPYDATVTRRLREAGIVVLG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YGP +PW +TD+ PGGS GGSSA++A F +IGTDT Sbjct: 128 KTNMDEFAMGSSTENSAYGPTRNPW----NTDRI-PGGSGGGSSASLAAFEAPLAIGTDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L +AIAG+D Sbjct: 183 GGSIRQPGAVTGTVGVKPTYGGVSRYGLVAFSSSLDQPGPCARTVLDAALLHEAIAGHDP 242 Query: 241 CDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T ++ PVP A + ++G+ VG+ +E+ D P + +++Q + L G Sbjct: 243 MDSTSIDQPVPQVVAAAREGASGDLKGVRVGVVREFSGDGYQPGVQRSFQAAVDQLAALG 302 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSI 353 A++VE+S PH YALPAYY+I+P+EASSNLAR+D +RYGLRV + E+ TR Sbjct: 303 AEVVEVSCPHFDYALPAYYLIAPSEASSNLARFDAMRYGLRVGDDSTRSAEEVMSLTREA 362 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LSS YD++Y +A+K+RTLI RDF AF Q VDV+++PTTPT+A Sbjct: 363 GFGPEVKRRIMLGTYALSSGYYDAYYGQAQKVRTLITRDFDAAFAQ-VDVLVSPTTPTTA 421 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F +G ++ M D+ T+ N+AG A+SVP+ L E +P+GLQ++ ++ Sbjct: 422 FEIGARVDD--PMAMYLADLCTIPANLAGNAAMSVPSGLSDEDGLPVGLQIMAPTLADDR 479 Query: 473 LFSVGQIIE 481 L+ VG E Sbjct: 480 LYRVGAAYE 488 >gi|300361110|ref|ZP_07057287.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus gasseri JV-V03] gi|300353729|gb|EFJ69600.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus gasseri JV-V03] Length = 479 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/475 (46%), Positives = 308/475 (64%), Gaps = 18/475 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+ +I+A +L ++ I+ ++ ++NA+I V A+ A + ++ L GI Sbjct: 14 KLQDGEITAEDLAKETVKNIKETDKKINAWI-TVDDDAKPAED------LDFAKNKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T G+ T A SHIL + P Y++TV KL A +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGMKTTAASHILYNYMPVYDATVISKLKKAQATFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPWNL-----EKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++++ V+DSA +L IAG DE DAT VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMSKRVKDSAEVLNVIAGPDEHDATVSEKEVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L Q ++G+ + +PKEY +D + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 SFLGQDVKGLRIAVPKEY-MDAVDGEMRDVVQKQIDVLKDAGAVINEVSLPHTKYVVPTY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YI++ +EASSNL RYDG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIVASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A ++RTLI RDF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 AYDEFFKKAAQVRTLICRDFEKIFAEN-DVIVGPTTTEPAFGIGEELSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T++ N+AG+PA SVPA L + MP GLQ++ + F E T+F V IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPAGLQIMAKRFDEGTVFKVADFIERNNKFYE 471 >gi|302554319|ref|ZP_07306661.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces viridochromogenes DSM 40736] gi|302471937|gb|EFL35030.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces viridochromogenes DSM 40736] Length = 497 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/488 (45%), Positives = 325/488 (66%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ + +E+ R+ S +++AV++ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDIIKLTAAETAARIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+G+ T S +L+G+ P Y++TVTQ+L V+L Sbjct: 61 EKRARGEKLGPLAGVPLALKDIFTTEGVPTTVGSKMLEGWIPPYDATVTQRLKAADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTK--IPGGSGGGSSAALASFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+QGM VG+ K++R + + + + + + L++ GA+ Sbjct: 236 PLDSTSIDEPVPAVVEAARNGSVQGMRVGVVKQFRGEGYQAGVIQRFDESVELLRELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+DG+RYGLRV G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDGLRYGLRV-GDDGTHSAEEVTSLTREAG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS YD++Y A+K+RTLIK+DF +AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLIKQDFDKAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 414 AIGERADD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPVMKDDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|57652121|ref|YP_186785.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus COL] gi|87161785|ref|YP_494533.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195799|ref|YP_500609.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222050|ref|YP_001332872.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus str. Newman] gi|161510123|ref|YP_001575782.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140353|ref|ZP_03564846.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451034|ref|ZP_05699070.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A5948] gi|262049944|ref|ZP_06022804.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus D30] gi|262052806|ref|ZP_06024993.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus 930918-3] gi|282923239|ref|ZP_06330920.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A9765] gi|294849449|ref|ZP_06790191.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A9754] gi|304379088|ref|ZP_07361835.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|71152062|sp|Q5HEM2|GATA_STAAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109891985|sp|Q2FFJ5|GATA_STAA3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|122539112|sp|Q2FWY9|GATA_STAA8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|172048960|sp|A6QIC8|GATA_STAAE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189045264|sp|A8Z2R4|GATA_STAAT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|57286307|gb|AAW38401.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus COL] gi|87127759|gb|ABD22273.1| Aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203357|gb|ABD31167.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374850|dbj|BAF68110.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus str. Newman] gi|160368932|gb|ABX29903.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861276|gb|EEV84088.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A5948] gi|259159299|gb|EEW44356.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus 930918-3] gi|259161952|gb|EEW46534.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus D30] gi|269941372|emb|CBI49769.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus TW20] gi|282593150|gb|EFB98149.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A9765] gi|294823586|gb|EFG40013.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A9754] gi|298695240|gb|ADI98462.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus ED133] gi|302333565|gb|ADL23758.1| Aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus JKD6159] gi|302751773|gb|ADL65950.1| Aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342323|gb|EFM08215.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196229|gb|EFU26584.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus CGS01] gi|320139719|gb|EFW31588.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MRSA131] gi|320142364|gb|EFW34178.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MRSA177] gi|323439842|gb|EGA97558.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus O11] gi|323443005|gb|EGB00626.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus O46] gi|329314577|gb|AEB88990.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus T0131] gi|329728581|gb|EGG65011.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus 21189] Length = 485 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 311/464 (67%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|283771050|ref|ZP_06343941.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus H19] gi|283459644|gb|EFC06735.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus H19] Length = 485 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/465 (45%), Positives = 311/465 (66%), Gaps = 13/465 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADANDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + + + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLDEGVADDVKEAVKNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFEEKTLYRVA 469 >gi|258422977|ref|ZP_05685876.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A9635] gi|257846764|gb|EEV70779.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A9635] Length = 485 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 311/464 (67%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSDIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|225569279|ref|ZP_03778304.1| hypothetical protein CLOHYLEM_05361 [Clostridium hylemonae DSM 15053] gi|225162078|gb|EEG74697.1| hypothetical protein CLOHYLEM_05361 [Clostridium hylemonae DSM 15053] Length = 500 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/470 (44%), Positives = 297/470 (63%), Gaps = 10/470 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E ++++ ++SA E V++ IE + ++ ++ + ++A A + +I G Sbjct: 6 MTAVELGKKIKAGELSAEEAVEAAFLRIEKTEKDVHGFLALDKERALKRARQVQIQIKEG 65 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P GIKD T G+ T S +L+ F P Y + ++L G +++GK NMD Sbjct: 66 TMTAPLAGVPAGIKDNLCTAGMKTTCASRMLENFIPAYTAEAVRRLEQCGVIVIGKTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ ETSY+G +PW PGGSSGGS AAVA C+ ++G+DTGGSIR Sbjct: 126 EFAMGSTTETSYFGVTRNPWNL-----HHVPGGSSGGSCAAVAAAECSFALGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QP+SF G GIKPTYG SR G+I++A SLDQ G + R V D A++L+AIAGYD+ D+T Sbjct: 181 QPSSFCGVTGIKPTYGTVSRSGLIAYASSLDQIGPVARDVTDCAVILEAIAGYDKKDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + AL ++G+ +GIP++Y L+ + +T + L++ GA + E L Sbjct: 241 MAREHYGFAEALTDDVKGLRIGIPRDYLGKGLNAEVKETVLRAAEVLEERGAHVEEFDLS 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 T+YA+PAYY+I+ AEASSNLAR+DGV+YG R EG + MY+ TRS GFG EVK RIM Sbjct: 301 LTEYAIPAYYVIASAEASSNLARFDGVKYGYRSPEGGGLHSMYKKTRSEGFGAEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G++VLSS YD++YL+A +++ LIK+ F AF Q DVIL P +P +A LG + Sbjct: 361 LGSFVLSSGYYDAYYLKALRVKALIKQAFDRAFGQ-YDVILGPASPATAPELGSSLGDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 M D++TV+VN+AGLP ISVPA K +P+G+QLIG FRE+ + Sbjct: 420 KM--YLGDIYTVSVNLAGLPGISVPAGHDSKGLPIGVQLIGDCFREDNII 467 >gi|284024947|ref|ZP_06379345.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus 132] Length = 485 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 310/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y ++ K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSHKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|227512907|ref|ZP_03942956.1| possible amidase [Lactobacillus buchneri ATCC 11577] gi|227523035|ref|ZP_03953084.1| possible amidase [Lactobacillus hilgardii ATCC 8290] gi|227083907|gb|EEI19219.1| possible amidase [Lactobacillus buchneri ATCC 11577] gi|227089853|gb|EEI25165.1| possible amidase [Lactobacillus hilgardii ATCC 8290] Length = 487 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/475 (45%), Positives = 305/475 (64%), Gaps = 11/475 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +KDIS EL + I+ + +NA++ + + A A + D++ I+ D L G+ Sbjct: 14 QLVNKDISVEELTKQTLDNIKAVDGDINAFLTLDEEGALKQANKLDEKGIDSDNL-LSGM 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKG+ T A S IL+ F P Y++T +K+ + G + +GK NMDEFAMG S E Sbjct: 73 PVAVKDNIVTKGLKTTAASKILENFTPIYDATAAEKIKNLGTITVGKTNMDEFAMGGSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + +PW D T PGGSSGGS+AAVA A++G+DTGGSIRQPASF G V Sbjct: 133 NSAFKITHNPW---DKTK--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPASFNGVV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G ITR V D+A LL AIAG+D+ D T VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPITRNVSDNATLLNAIAGHDDHDLTSSTKEVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L++ ++G+ +GIP E+ L + K K GA + E+SLPHT+Y + AY Sbjct: 248 STLNKGVKGLRIGIPSEFMSQGLDEDVKKVVNDTAETFKKLGATVGEVSLPHTKYGVAAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YIIS +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 308 YIISSSEASSNLQRFDGIRYGRRAKDVKNLDDLYIKSRSEGFGDEVKRRIMLGTFSLSAG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A ++RTL+ DFT F+ D+IL PT PT A+ +G E+ S M NDV Sbjct: 368 FYDAYFKKAAQVRTLMINDFTNVFKD-YDLILAPTAPTPAYGIG--EDVSDPMTMYMNDV 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +S+PA K +P+G+QLIG+P+ E T++ G EK+ + + Sbjct: 425 LTLPVNLAGLPGMSIPAGFS-KGLPVGVQLIGRPYDELTVYQAGSAFEKDTDFAK 478 >gi|313889657|ref|ZP_07823300.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313121954|gb|EFR45050.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 488 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 212/486 (43%), Positives = 296/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN ++E D L K+ISA EL + I+ I+ ++++I + A A+ D + Sbjct: 3 LNTKNLAELHDLLVKKEISAKELTVATIEDIKKREDSISSFITISEDSALVQAQAIDDKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP +KD +TKGI T A S +L + P + +T +++GK N Sbjct: 63 IDADNL-LSGIPFAVKDNISTKGILTTAASKMLYNYEPIFNATAIDNALAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DQTR--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G I++TV ++A LL AIAG DE D+ Sbjct: 177 IRQPAAFNGVVGMKPTYGTVSRYGLIAFGSSLDQIGPISQTVSENAYLLNAIAGPDEKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V DY + Q I+GM + +PKEY + + P I + + + GA + E+S Sbjct: 237 TSAPVRVADYTSKIGQDIKGMKIALPKEYLGEGIDPQIKENILEAAKQFEKLGALVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y TRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAENAKSLDDIYVQTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTP+ AF L ++ Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFAKVFAN-YDLILGPTTPSVAFGLDTLNHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D+ T+ VN+AGLP IS+P+ + +P+GLQLIG + EET++ E Sbjct: 416 PVSM--YLADLLTIPVNLAGLPGISIPSGFAD-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 STDYHK 478 >gi|222151880|ref|YP_002561040.1| glutamyl-tRNAGln amidotransferase subunit A [Macrococcus caseolyticus JCSC5402] gi|254790395|sp|B9E826|GATA_MACCJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|222121009|dbj|BAH18344.1| glutamyl-tRNAGln amidotransferase subunit A [Macrococcus caseolyticus JCSC5402] Length = 481 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 215/491 (43%), Positives = 318/491 (64%), Gaps = 16/491 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++ +++K I EL++ IE ++ +N+++ + + A A+ D Sbjct: 3 LRYESIESLSQMIQNKTIRPSELIEDTFVNIEKDDTVINSFLALDKEAALEKAKTMDNET 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G L GIP+GIKD TK + T S IL+GF Y++TV KL +++GKLN Sbjct: 63 PSGK---LFGIPMGIKDNIVTKDVETTCASKILEGFNSVYDATVMNKLNAENGILVGKLN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S E S+Y ++P+ K PGGSSGGS+AAVA L S+G+DTGGS Sbjct: 120 MDEFAMGGSTENSFYKKTVNPFDH-----KAVPGGSSGGSAAAVAASLVPFSLGSDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPAS+ G VG+KPTYGR SR G+++FA SLDQ G ITR V+D+A +L+ I+G D D+ Sbjct: 175 IRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNATVLEVISGLDPHDS 234 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + D+ +D+ I+G+ V +PKEY + +S + + Q I L+ GA + E+S Sbjct: 235 TSAPVDNVDFTSQIDKDIKGLRVAVPKEYLGEGVSEEVKASVQAAIKALEKMGATVEEVS 294 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+++Y + YYI+S +EAS+NLAR+DG+RYG + EG +++ E+Y+ TR GFG EVK R Sbjct: 295 LPNSKYGVATYYILSSSEASANLARFDGIRYGYQAEGAQNLEELYKKTRQEGFGDEVKRR 354 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LSS YD++Y +A+K+RTLIK+DF FE D+I+ PT PT+AF +G + N+ Sbjct: 355 IMLGTYALSSGYYDAYYKKAQKVRTLIKQDFERVFEN-YDIIVGPTAPTTAFDIGAQIND 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M ND+ T+ +N+AGLP++S+P + P+GLQLIG+PF E+TL++V E+ Sbjct: 414 PLTM--YANDILTIPINLAGLPSMSIPCGESNGR-PIGLQLIGKPFDEKTLYNVAYNYEQ 470 Query: 483 EAGYFRPHKWW 493 F H+ + Sbjct: 471 ---IFNMHERY 478 >gi|332522643|ref|ZP_08398895.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus porcinus str. Jelinkova 176] gi|332313907|gb|EGJ26892.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus porcinus str. Jelinkova 176] Length = 488 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/490 (42%), Positives = 296/490 (60%), Gaps = 11/490 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++E D L K+ISA EL + I+ I+ + ++I + A A A+ D + Sbjct: 3 FNTKDLTELHDLLVKKEISAKELTAATIEDIKKREDSIGSFITISEDSALAQAQAIDDKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP +KD +TKGI T A S +L + P + +T +++GK N Sbjct: 63 IDADNL-LSGIPFAVKDNISTKGILTTAASKMLYNYEPIFNATAIDNALAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G I++TV ++A +L IAG DE D+ Sbjct: 177 IRQPAAFNGVVGMKPTYGAVSRYGLIAFGSSLDQIGPISQTVSENAYMLNVIAGPDEKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + Q I+GM + +PKEY + + P I + + + GA++ E+S Sbjct: 237 TSAPVKIADYTSKIGQEIKGMKIALPKEYLGEGIDPQIKENILEAAKQFEKLGARVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K + ++Y TRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAENAKSLDDIYVQTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTP+ AF L ++ Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFAKVFAN-YDLILGPTTPSVAFGLDTLNHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D+ T+ VN+AGLP IS+P+ + +P+GLQLIG + EET++ E Sbjct: 416 PVSM--YLADLLTIPVNLAGLPGISIPSGFAD-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFRPHKW 492 Y + + Sbjct: 473 STDYHKQQPF 482 >gi|295836376|ref|ZP_06823309.1| glutamyl-tRNA amidotransferase, A subunit [Streptomyces sp. SPB74] gi|197698662|gb|EDY45595.1| glutamyl-tRNA amidotransferase, A subunit [Streptomyces sp. SPB74] Length = 497 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/488 (45%), Positives = 323/488 (66%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + +++ +++ S +++AVE+ ++++ IE + +++A++ V Q A A A D Sbjct: 1 MTEIIRLTAAQTAEKIASGELTAVEVTEAHLARIEAVDEKVHAFLHVDRQGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+G+ T S IL+G+ P Y++TVT++L D V+L Sbjct: 61 EKRARGEKLGPLAGVPLALKDIFTTEGVPTTVGSKILEGWIPPYDATVTRRLKDADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V+ PVP E A S+ GM VG+ K++R + + + + + + L++ GA+ Sbjct: 236 PLDSTSVDAPVPPVVEAARGGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLRELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTAITRGEG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK R+++GTY LSS YD++Y A+K+RTLI +DF AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRVILGTYALSSGYYDAYYGSAQKVRTLITQDFARAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ++ ++E L Sbjct: 414 PIGERSDD--PMAMYLADLCTIPANLAGNAAMSLPCGLAPEDGLPVGLQIVAPAMKDERL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|66047392|ref|YP_237233.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. syringae B728a] gi|75500717|sp|Q4ZNS7|GATA_PSEU2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|63258099|gb|AAY39195.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Pseudomonas syringae pv. syringae B728a] Length = 483 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/473 (46%), Positives = 309/473 (65%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L K S+ EL + I + Q+N++I + A A+ +D R G Sbjct: 4 MTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK NMDE Sbjct: 64 ENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+T + Sbjct: 179 PAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+SLP+ Sbjct: 239 DEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVRELEKLGAIVKEVSLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ RIM+ Sbjct: 299 LQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + ++ Sbjct: 359 GAYALSAGYYDAYYLQAQKIRRLIKNDFMNAFAD-VDVILGPTTPNPAWKIGAKTHD--P 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 IAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|257462342|ref|ZP_05626757.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. D12] gi|317060008|ref|ZP_07924493.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. D12] gi|313685684|gb|EFS22519.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. D12] Length = 485 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/487 (43%), Positives = 314/487 (64%), Gaps = 12/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ M E S + SAVE+V+++ Q IE ++N+++ + +K A++ D Sbjct: 1 MKKIYEMTAKELHQSFLSGEYSAVEIVEAFFQRIEAVEKKINSFVSLRKEKVFEEAKKLD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR L G+ + IKD +G + A S IL+ + Y++TV KL + A+++ Sbjct: 61 EKRAAGKTLGSLAGVVVAIKDNMVFQGEKSTAASKILENYEGIYDATVVAKLKEADALLV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMG + +TS+Y +P+ D T PGGSSGG+++++A A S+G+D Sbjct: 121 GSTNMDEFAMGGTTKTSHYKMTANPY---DITR--VPGGSSGGAASSIAAQQVALSLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYGR SR G+++FA SLDQ G + + V D A + +AG D Sbjct: 176 TGGSIRQPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGPLAKNVEDIAYAMNVLAGSD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DAT + VPDY L + I+GM +G+PKEY ++ + + + + I L+ GA+I Sbjct: 236 DYDATVEEVEVPDYTSFLGKDIRGMKIGVPKEYFIEGIREEVKEIILKAIDSLRALGAEI 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 V+ISLPHT+YA+P YY+++PAEASSNLAR+DGVRYG R E +I E+Y N+R+ GFG E Sbjct: 296 VDISLPHTKYAVPTYYVLAPAEASSNLARFDGVRYGYRSENSSNIEELYVNSRTEGFGDE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD+++ +A+++R LI+ DF +AFE VDVI+TP P++AF L + Sbjct: 356 VKRRIMIGTYVLSAGFYDAYFKKAQRVRRLIQEDFIKAFET-VDVIVTPVAPSTAFQLSE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ + D+FT+ N+AG+P +SVPA + +P+G+Q +G+ F E L VG Sbjct: 415 QKT---PIELYLEDIFTIPANLAGIPGLSVPAGMT-GGLPVGIQFLGKAFHEGELLQVGS 470 Query: 479 IIEKEAG 485 EK G Sbjct: 471 AFEKARG 477 >gi|182414176|ref|YP_001819242.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Opitutus terrae PB90-1] gi|177841390|gb|ACB75642.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Opitutus terrae PB90-1] Length = 487 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 232/492 (47%), Positives = 318/492 (64%), Gaps = 17/492 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + ++E L +K++S+ EL+ + I + +++A+ A A A SD R Sbjct: 4 ELWYQPITELAAALEAKELSSRELIQAVIARTKAVEPRVHAFNSFDESDALAQAAASDAR 63 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G AR L+GIPIG+KD A +G A S +L F Y++TVT +L GAV G+ Sbjct: 64 RAAGQARGTLDGIPIGLKDVIAVEGQPLTASSKMLANFVSPYDATVTTRLKAAGAVCWGR 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S +G +PW D T PGGSSGGS+AA+A A++G+DTG Sbjct: 124 LNMDEFAMGSSTENSGFGSSHNPW---DLTR--VPGGSSGGSAAALAAGEAIATLGSDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ G VG+KP+YG SR G+I+FA SLDQ G RTV D A +L+ I+G+D Sbjct: 179 GSIRQPAALCGVVGMKPSYGLVSRYGLIAFASSLDQIGPFGRTVEDVATVLQTISGHDLR 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V + VPDY L + +GIPKEY + L P I +Q I++ + G ++ E Sbjct: 239 DSTSVKIEVPDYRAELAKRRGPWKLGIPKEYFGEGLDPEIGAAVEQAIAFYRRQGCEVKE 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 +SLPHT+Y L YYII+ AEASSNLARYDG+RYG R + KDI+++Y +R+ GFG EVK Sbjct: 299 VSLPHTRYCLDTYYIIATAEASSNLARYDGIRYGHRSSKAKDIVDLYFQSRAEGFGPEVK 358 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLSS YD++YLRA+K+RTLI++DF +A+EQ VD ++TPT+P AF +G++ Sbjct: 359 RRIILGTYVLSSGYYDAYYLRAQKVRTLIRQDFLKAYEQ-VDALITPTSPVPAFKIGEK- 416 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S + DV+T+ VN+AGLP ISVP + +P+G+QLIGQPF+E L ++ Sbjct: 417 --SDPLAMYLLDVYTIGVNLAGLPGISVPCGFTKSGLPIGVQLIGQPFKEADLLAIAH-- 472 Query: 481 EKEAGYFRPHKW 492 Y R H W Sbjct: 473 ----AYDRAHDW 480 >gi|257466393|ref|ZP_05630704.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium gonidiaformans ATCC 25563] gi|315917549|ref|ZP_07913789.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium gonidiaformans ATCC 25563] gi|313691424|gb|EFS28259.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium gonidiaformans ATCC 25563] Length = 485 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 211/487 (43%), Positives = 316/487 (64%), Gaps = 12/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ M E + + AVE+V+++ Q IE S++N+++ + +K A++ D Sbjct: 1 MKKIYEMTAKELHQSFLAGEYRAVEIVEAFFQRIEAVESKINSFVSLRKEKVLEEAKQLD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ ++G + L G+ + +KD +G A S IL+ + Y++TV KL + A++L Sbjct: 61 EKKLSGKELGSLAGVVVALKDNMLCQGEKVTAASKILENYEGIYDATVVSKLKEADALIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMG + +TSY+ +P+ D T PGGSSGG+++++A ++G+D Sbjct: 121 GFTNMDEFAMGGTTKTSYHKMTANPY---DITR--VPGGSSGGAASSIAAQQVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KP+YGR SR G+++FA SLDQ G + + V D A + IAG D Sbjct: 176 TGGSIRQPASFCGVVGLKPSYGRVSRYGLMAFASSLDQIGPLAKNVEDIAYAMNVIAGTD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DAT + VPDY L + I+GM +G+PKEY ++ + + + + I LK GA+I Sbjct: 236 DYDATVKEVEVPDYTSFLGKEIRGMKIGVPKEYFIEGIRAEVKEIIMKSIDMLKSLGAEI 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 +EISLPHT+YA+P YY+++PAEASSNLAR+DGVRYG R E ++I ++Y N+R+ GFG E Sbjct: 296 IEISLPHTKYAVPTYYVLAPAEASSNLARFDGVRYGYRSENSQNIEDLYINSRTEGFGDE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD+++ +A+K+R LI+ DF +AFE VDVI+TP P+ AF L + Sbjct: 356 VKRRIMIGTYVLSAGFYDAYFKKAQKVRRLIQEDFIKAFET-VDVIVTPVAPSPAFQLSE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ + D+FT+ N+AG+P +SVPA L +P+G+Q +G+ F E L VG Sbjct: 415 QKT---PIELYLEDIFTIPANLAGIPGLSVPAGLA-GGLPVGIQFLGKAFHEGDLLQVGS 470 Query: 479 IIEKEAG 485 EK G Sbjct: 471 AFEKARG 477 >gi|227509974|ref|ZP_03940023.1| possible amidase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190580|gb|EEI70647.1| possible amidase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 487 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/475 (45%), Positives = 305/475 (64%), Gaps = 11/475 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +KDIS EL + I+ + +NA++ + + A A + D++ I+ D L G+ Sbjct: 14 QLVNKDISVEELTKQTLDNIKMVDGDINAFLTLDEEGALKQANKLDEKGIDSDNL-LSGM 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD TKG+ T A S IL+ F P Y++T +K+ + G + +GK NMDEFAMG S E Sbjct: 73 PVAVKDNIVTKGLKTTAASKILENFTPIYDATAAEKIKNLGTITVGKTNMDEFAMGGSTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + +PW D T PGGSSGGS+AAVA A++G+DTGGSIRQPASF G V Sbjct: 133 NSAFKITHNPW---DKTK--VPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPASFNGVV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+I+F SLDQ G ITR V D+A LL AIAG+D+ D T VPD+ Sbjct: 188 GMKPTYGRVSRWGLIAFGSSLDQIGPITRNVSDNATLLNAIAGHDDHDLTSSTKEVPDFT 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L++ ++G+ +GIP E+ L + K K GA + E+SLPHT+Y + AY Sbjct: 248 STLNKGVKGLRIGIPSEFMSQGLDDDVKKVVNDTAETFKKLGATVGEVSLPHTKYGVAAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YIIS +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 308 YIISSSEASSNLQRFDGIRYGRRAKDVKNLDDLYIKSRSEGFGDEVKRRIMLGTFSLSAG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD+++ +A ++RTL+ DFT F+ D+IL PT PT A+ +G E+ S M NDV Sbjct: 368 FYDAYFKKAAQVRTLMINDFTNVFKD-YDLILAPTAPTPAYGIG--EDVSDPMTMYMNDV 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +S+PA K +P+G+QLIG+P+ E T++ G EK+ + + Sbjct: 425 LTLPVNLAGLPGMSIPAGFS-KGLPVGVQLIGRPYDELTVYQAGSAFEKDTDFAK 478 >gi|254445153|ref|ZP_05058629.1| Amidase, putative [Verrucomicrobiae bacterium DG1235] gi|198259461|gb|EDY83769.1| Amidase, putative [Verrucomicrobiae bacterium DG1235] Length = 490 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/496 (44%), Positives = 327/496 (65%), Gaps = 20/496 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYI---QAIENSNSQMNAYIEVVAQKARAAAEES 59 EL++ + SE + L K++SAVEL+ + I +A+E+ + N+Y E A K AE S Sbjct: 4 ELHYKSASELSELLGKKELSAVELMKATIARTKAVEDKVAAFNSYDEADALKQ---AEAS 60 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D R G+A L+GIP+GIKD A G S +L+ F Y++T +KL GAV+ Sbjct: 61 DARRAAGEALGPLDGIPVGIKDNLAVNGQPLTCSSKMLEKFVSPYDATCIEKLKTEGAVL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G+LN+DEFAMGSS E S + +PW + PGGSSGGS+AA A A ++G+ Sbjct: 121 WGRLNLDEFAMGSSTENSAFKTTSNPWNL-----ECIPGGSSGGSAAATAAGQAAMTLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPAS G VG+KPTYGR SR G+ +FA SLDQ G +TR V+D+A+LL+AI+G+ Sbjct: 176 DTGGSIRQPASHCGVVGVKPTYGRVSRYGLAAFASSLDQIGPVTRNVKDAALLLQAISGH 235 Query: 239 DECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DE D+T + P++ +++ Q + T+G+PKEY + S + + I + + G Sbjct: 236 DERDSTSYRISEPNFLASMEKQRGRKWTLGLPKEYFANAASTPAMEPVLKAIEFYRSLGC 295 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRSIG 354 ++ E+SLPHT YA+ YYII+ AEASSNLARYDG+RY R E KD +++Y +R+ G Sbjct: 296 EVKEVSLPHTDYAVATYYIIATAEASSNLARYDGIRYTHRAEKFDTKDSVDIYCQSRAEG 355 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG+EVK R+++GTYVLSS YD++YL+A+K+RTLI++DF +AFE+ VD +LTPT+PT AF Sbjct: 356 FGEEVKRRVILGTYVLSSGYYDAYYLKAQKVRTLIRQDFEKAFEE-VDALLTPTSPTPAF 414 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G E +S + +D++T++ N+AG+P +S+P + +P+GLQ++G+PF+E+ + Sbjct: 415 KKG--EKSSDPLSMYLSDIYTISANLAGIPGMSLPCGYSD-GLPVGLQILGKPFQEDEML 471 Query: 475 SVGQIIEKEAGYFRPH 490 S+ E G+ H Sbjct: 472 SIANEFEAAHGFKDQH 487 >gi|315653831|ref|ZP_07906747.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus iners ATCC 55195] gi|315488527|gb|EFU78173.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus iners ATCC 55195] Length = 479 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/474 (43%), Positives = 301/474 (63%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++K+I+A +L + I+ ++NA I V+ AE D + +L GI Sbjct: 14 KLKNKEITAEQLTQDTLAKIKELEPKLNAMITVIDDAK--PAENLDF------SNELAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T + T A SHIL + P Y++TV KL ++GK NMDEFAMGSS+E Sbjct: 66 PIAVKDNIITNNVKTTAASHILYNYMPVYDATVVSKLKAAKMTIIGKTNMDEFAMGSSSE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW T + G ++ + V A++GTDTGGSIRQPA+F G Sbjct: 126 NSYFGAPKNPWDLTKVTGGSSGGSAAAVAGGEVI-----AALGTDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L ++G D+ DAT VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVQDSAKILNVLSGADDHDATVSEREVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL+Q ++G+ V +P+EY + +S + ++ I L+D GA I ++SLPHT+Y +P Y Sbjct: 241 KALNQDVKGLRVAVPEEYFGEGISEKVKALIKEQIKVLEDNGAIINKVSLPHTKYVIPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRFDGIRYGYRSKDAKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + FE+ DVI+ PTTPT AF L + + M ND+ Sbjct: 361 SYDRFFRQAAKVRTLICHDFEKIFEEN-DVIVGPTTPTPAFGLNSKTKDPLEM--YANDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T+A N+AG+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTIAANLAGVPAASVPAGLVD-GMPVGLQIMAKRFDEESIFRVADFIERSNKFY 470 >gi|195977533|ref|YP_002122777.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|229464469|sp|B4U197|GATA_STREM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|195974238|gb|ACG61764.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatC [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 488 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/487 (42%), Positives = 295/487 (60%), Gaps = 13/487 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L +KDISAVEL + ++ I+ + ++I + + A A D + Sbjct: 3 FNHHTIEELHELLVAKDISAVELTKATLEDIKAREEAVGSFITIAEEAALKQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T +D +++GK N Sbjct: 63 IDPD-NVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVANAYDKDMIIIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 MDEFAMG S ETSY+ + W RS PGGSSGGS+ AVA S+G+DTGG Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWDRSR------VPGGSSGGSATAVASGQVRLSLGSDTGG 175 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+F G VG+KPTYG SR G+I+F SLDQ G TVR++A LL IAG D D Sbjct: 176 SIRQPAAFNGVVGLKPTYGAVSRYGLIAFGSSLDQIGPFAPTVRENAQLLTVIAGSDRKD 235 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + + DY + Q I+GM + +PKEY + + P I +T + GA I E+ Sbjct: 236 STSAPVQIADYTSKIGQDIKGMKIALPKEYLGEGIDPKIKETVLAAAKHFEKLGAIIEEV 295 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLPH++Y + YYII+ +EASSNL R+DG+RYG R + K + ++Y TRS GFG EVK Sbjct: 296 SLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAADAKSLEDIYVKTRSQGFGDEVKR 355 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PT PT+AF L + Sbjct: 356 RIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPTAAFEL--DTL 412 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N + D+ T+ VN+AGLPAIS+PA + +P+GLQLIG + EE ++ E Sbjct: 413 NHDPVAMYLADLLTIPVNLAGLPAISIPAGFAD-GLPVGLQLIGPKYSEEVIYQAAAAFE 471 Query: 482 KEAGYFR 488 Y + Sbjct: 472 ATTDYHK 478 >gi|289435092|ref|YP_003464964.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171336|emb|CBH27878.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 483 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/483 (45%), Positives = 307/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIEAVEDKVGSFITLNKETALGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGMPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y+ TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYKKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N++G+PAISVP + +P+GLQ+IG F E L+ V E+ Sbjct: 419 M--YSNDILTVPINLSGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQATT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|325911375|ref|ZP_08173787.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus iners UPII 143-D] gi|325476725|gb|EGC79879.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus iners UPII 143-D] Length = 479 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/474 (43%), Positives = 301/474 (63%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L++K+I+A +L + I+ ++NA I V+ AE D + +L GI Sbjct: 14 KLKNKEITAEQLTQDTLAKIKELEPKLNAMITVIDDAK--PAENLDF------SNELAGI 65 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T + T A SHIL + P Y++TV KL ++GK NMDEFAMGSS+E Sbjct: 66 PIAVKDNIITNNVKTTAASHILYNYMPVYDATVVSKLKAAKMTIIGKTNMDEFAMGSSSE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SY+G +PW T + G ++ + V A++GTDTGGSIRQPA+F G Sbjct: 126 NSYFGAPKNPWDLTKVTGGSSGGSAAAVAGGEVI-----AALGTDTGGSIRQPAAFNGIF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L ++G D+ DAT VPD+ Sbjct: 181 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVQDSAKILNVLSGADDHDATVSEREVPDFT 240 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +AL+Q ++G+ V +P+EY + +S + ++ I L+D GA I ++SLPHT+Y +P Y Sbjct: 241 KALNQDVKGLRVAVPEEYFGEGISEKVKALIKEQIKVLEDHGAIINKVSLPHTKYVIPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL R+DG+RYG R + K++L++Y +RS GFG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRFDGIRYGYRSKDAKNLLDVYVKSRSEGFGDEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + FE+ DVI+ PTTPT AF L + + M ND+ Sbjct: 361 SYDRFFRQAAKVRTLICHDFEKIFEEN-DVIVGPTTPTPAFGLNSKTKDPLEM--YANDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T+A N+AG+PA SVPA L + MP+GLQ++ + F EE++F V IE+ ++ Sbjct: 418 LTIAANLAGVPAASVPAGLVD-GMPVGLQIMAKRFDEESIFRVADFIERSNKFY 470 >gi|299783518|gb|ADJ41516.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus fermentum CECT 5716] Length = 487 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/477 (45%), Positives = 315/477 (66%), Gaps = 14/477 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K +SA EL + I+ ++ Q+ A++ + + A A E D+ I D L GIP Sbjct: 15 LVAKKVSATELTKAAFDRIKATDDQVGAFLALNEEAALKQAAELDQAGIAEDQL-LAGIP 73 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD TKG+ T A S IL+ F+P Y++TV +KL GA+ +GK+N+DEFAMGSS E Sbjct: 74 LAVKDNIVTKGLTTTAASKILENFKPVYDATVVEKLNAAGAINVGKVNLDEFAMGSSTEN 133 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIR PASFTGTVG Sbjct: 134 SAFKTTKNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGSDTGGSIRMPASFTGTVG 188 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+F S DQ G +T++V+D+AIL+ AIAG D+ D T N PVPD+ Sbjct: 189 MKPTYGRVSRWGLIAFGSSFDQIGWLTQSVKDNAILMSAIAGKDDRDMTSANQPVPDFAA 248 Query: 256 AL-DQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L DQ+ I+GM + +P+EY ++ L + + + + L+ GA I E+SLPHT+Y +PA Sbjct: 249 GLNDQADIKGMKIAVPREY-MECLDDDVQEVIEASLKHLESLGATIDEVSLPHTKYGVPA 307 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYI++ +EASSNL R+DG+RYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 308 YYILASSEASSNLQRFDGIRYGFRADDVKNLEDVYVKTRSQGFGDEVKLRIMLGTFSLSA 367 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++ +A K+R LI +DF + + D+I+ PT ++AF +G E + M +ND Sbjct: 368 GFYDAYFNKAAKVRRLIAQDFDDVLKDH-DLIVGPTGTSTAFKIGSEIADPKQM--YFND 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 V TV +NMAGLP +S+PA + MP+GLQ+IG+ F E T++ G + E+ + + Sbjct: 425 VLTVTLNMAGLPGMSIPAGFSKDNGMPIGLQMIGKRFDEATIYKAGYVFEQTTDFHK 481 >gi|239638043|ref|ZP_04679002.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus warneri L37603] gi|239596326|gb|EEQ78864.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus warneri L37603] Length = 485 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/484 (45%), Positives = 318/484 (65%), Gaps = 22/484 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD----- 70 +++K+I ++V AIE ++ + +++ + + A A+E D+ A+D Sbjct: 15 IKNKEIKPSQIVSDIYDAIEETDPTIKSFLALDKENAMKKAQELDEL----QAKDQMEGK 70 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+GIKD TK + T S +L+GF P YESTV KL + AV++GKLNMDEFAMG Sbjct: 71 LFGIPMGIKDNIITKDLETTCASKMLEGFVPIYESTVMNKLHNENAVLIGKLNMDEFAMG 130 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ETSY+ ++P+ D T PGGSSGGS+AAVA L S+G+DTGGSIRQPAS+ Sbjct: 131 GSTETSYFKKTVNPF---DHTA--VPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPASY 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+++FA SLDQ G +TR V+D+A++L+AI+G D D+T + Sbjct: 186 CGIVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNALVLEAISGIDPNDSTSAPVDD 245 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D+ + + I+G+ V +PKEY + +S + + + + LK GA++ E+SLP+T+Y Sbjct: 246 VDFTSDIGKDIKGLKVALPKEYLGEGVSEDVKASVKNAVETLKSLGAEVEEVSLPNTKYG 305 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG EVK RI +GT+ Sbjct: 306 IPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGDEVKRRIFLGTFA 365 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD+ Y +++K+RTLIK DF + FE+ D+++ PT PT+AF LG E ++ +M Sbjct: 366 LSSGYYDAFYKKSQKVRTLIKNDFDKIFEK-YDIVVGPTAPTTAFDLGDEIDDPLTM--Y 422 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V E + F Sbjct: 423 ANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVAYQYETQ---FNL 478 Query: 490 HKWW 493 H + Sbjct: 479 HDAY 482 >gi|290579840|ref|YP_003484232.1| putative glutamyl-tRNA(Gln) amidotransferase A subunit [Streptococcus mutans NN2025] gi|254996739|dbj|BAH87340.1| putative glutamyl-tRNA(Gln) amidotransferase A subunit [Streptococcus mutans NN2025] Length = 488 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E D L +K++SA+EL + ++ I+ + ++I V ++A A A D++ Sbjct: 3 FNHKSIDELHDLLVNKEVSALELTKATLEDIKEREETVGSFITVTQEEALAQAAAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TK I T A S +L ++P +++T +KL+ +++GK N Sbjct: 63 IDVD-NVMSGIPLAVKDNISTKNILTTAASKMLYNYKPIFDATSVEKLYGRDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S E SY+ + W + GGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTENSYFKLTKNAWNQ-----EKVAGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VGIKPTYGR SR G+I+F SLDQ G ++TV+++A LL I+G D+ D+ Sbjct: 177 IRQPAAFNGVVGIKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDKKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + VPD+ + + + I+GM + +PKEY + + +T L+ GA + E+S Sbjct: 237 TSSQVKVPDFTQFIGKDIKGMKIALPKEYIGQGIDEKVKETILTAAKHLESLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + + L ++Y NTRS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTDDYENLDDVYVNTRSEGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PT PT A+ L + + Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIMEDFKKVFAN-YDLILGPTAPTVAYDLDSQHQD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA E +P+G+QLIG+PF E+T++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFVE-GLPVGMQLIGKPFAEQTIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 STDYHK 478 >gi|281356615|ref|ZP_06243106.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Victivallis vadensis ATCC BAA-548] gi|281316742|gb|EFB00765.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Victivallis vadensis ATCC BAA-548] Length = 482 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/486 (45%), Positives = 307/486 (63%), Gaps = 20/486 (4%) Query: 1 MSELNFM--AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE 58 M+ELN + + E L +K+ SA ELV +Y + + ++ A++++ ++A AAE Sbjct: 1 MAELNLVNRPIHELAAGLAAKEFSAAELVAAYADRVAAKDGEIKAFLKLDREQALKAAEA 60 Query: 59 SDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 +D R G D +GIP+GIKDC +G S IL + Y+ST +L G + Sbjct: 61 ADARRAAGKPLSDYDGIPVGIKDCIVAEGETCSCASKILAPVKSPYDSTAVARLRAQGFI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 G+LNMDEFAMGSS E S + +P PGGSSGGS+A VA A++G Sbjct: 121 PFGRLNMDEFAMGSSCENSAFQKTANPCDV-----SRVPGGSSGGSAACVAASFAPAALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGSIRQPA+F G VG+KPTYGR SR G+++FA SLDQ G +T D+ ILL AIAG Sbjct: 176 SDTGGSIRQPAAFCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTHDALDAGILLDAIAG 235 Query: 238 YDECDATCVNLPVP-----DYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISW 291 D D+T +LP P D R S++GM +G+PKEY L+ ++ QQ I Sbjct: 236 GDPMDST--SLPNPAGGFADAVRNSSGSLKGMKIGLPKEYFTGSGLASGVETITQQAIEK 293 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 ++ GA++VE+SLPHT+YA+ YYII+ AEAS+NLAR+DG+RYG R EG+D+++ Y TR Sbjct: 294 VRSLGAELVEVSLPHTRYAVAVYYIIATAEASANLARFDGIRYGDRKEGRDLVDTYFKTR 353 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GTYVLSS YD++YLRA+K+RTLI+RDF EA+++ D++LTP TPT Sbjct: 354 GEGFGDEVKRRILLGTYVLSSGYYDAYYLRAQKVRTLIRRDFEEAYKR-CDLMLTPVTPT 412 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 AF G E S + +D+FT+A+N++G ISVPA E MP+G+Q + E Sbjct: 413 VAFKFG--EKTSDPLQMYLSDIFTIALNLSGNCGISVPAGRDPETGMPVGIQFLAPALDE 470 Query: 471 ETLFSV 476 L V Sbjct: 471 ARLLQV 476 >gi|167761365|ref|ZP_02433492.1| hypothetical protein CLOSCI_03773 [Clostridium scindens ATCC 35704] gi|167661031|gb|EDS05161.1| hypothetical protein CLOSCI_03773 [Clostridium scindens ATCC 35704] Length = 516 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/497 (42%), Positives = 301/497 (60%), Gaps = 22/497 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E ++RSK+IS E V + + IE + ++++++ V + A AE+ K++ G Sbjct: 6 MTAVEIGKKIRSKEISVAEAVKASLSQIEKAEEKIHSFVTVDREGALKRAEKIQKQLEEG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P+ IKD TK + T S IL+ F+P + + + L GAV++GK NMD Sbjct: 66 SLTGPLAGVPVAIKDNLCTKDMLTTCSSKILENFKPTFTAEAVRNLEKAGAVIIGKTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ ETSY+G +PW K PGGSSGGS AVA CA ++GTDTGGSIR Sbjct: 126 EFAMGSTTETSYFGETRNPWNL-----KHVPGGSSGGSCTAVAAEECAFALGTDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QP+S+ G VGIKPTYG SR G++++ SLDQ G I + V D A +L+AIA +D D+T Sbjct: 181 QPSSYCGVVGIKPTYGTVSRYGLVAYGSSLDQVGPIAKDVTDCAAILEAIASHDPKDSTS 240 Query: 246 VN------------LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 ++ + D+ AL ++GM +GIP++Y + L + + + + L+ Sbjct: 241 IDRDAYTYPGKEEGIKGYDFTGALVDDVKGMRIGIPQDYFGEGLDKEVKEQILRAVKVLE 300 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRS 352 + GA + L QYA+PAYY+I+ AEASSNL+R+DGV+YG R E K + MY+ TRS Sbjct: 301 EKGAIVEAFDLSLVQYAVPAYYVIASAEASSNLSRFDGVKYGYRTEEYKGLHNMYKKTRS 360 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIM+G++ LSS YD++YL+A K + LIK F +AFE+ DVI+ P PT+ Sbjct: 361 EGFGSEVKRRIMLGSFALSSGYYDAYYLKALKTKALIKNAFDKAFEK-YDVIVAPAAPTT 419 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A LGK + S M DV+TV+ N+AGLP ISVP K +P+G+QL+G F E Sbjct: 420 APELGK--SLSDPMKMYLADVYTVSANLAGLPGISVPVGQDSKGLPVGMQLLGNCFEEHK 477 Query: 473 LFSVGQIIEKEAGYFRP 489 + E+ Y RP Sbjct: 478 ILRAAYAYEQTRPYERP 494 >gi|15924890|ref|NP_372424.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus Mu50] gi|15927474|ref|NP_375007.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus N315] gi|156980216|ref|YP_001442475.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus Mu3] gi|255006687|ref|ZP_05145288.2| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus Mu50-omega] gi|54037150|sp|P63489|GATA_STAAN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|54041248|sp|P63488|GATA_STAAM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217715|sp|A7X427|GATA_STAA1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|112490471|pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ gi|112490490|pdb|2DQN|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Asn gi|112490675|pdb|2G5H|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab gi|112490680|pdb|2G5I|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Adp-Alf4 gi|269914490|pdb|3IP4|A Chain A, The High Resolution Structure Of Gatcab gi|13701693|dbj|BAB42986.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus subsp. aureus N315] gi|14247672|dbj|BAB58062.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus subsp. aureus Mu50] gi|156722351|dbj|BAF78768.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus subsp. aureus Mu3] Length = 485 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 310/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|21283570|ref|NP_646658.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MW2] gi|49486719|ref|YP_043940.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MSSA476] gi|148268373|ref|YP_001247316.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus JH9] gi|150394435|ref|YP_001317110.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus JH1] gi|253316909|ref|ZP_04840122.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729678|ref|ZP_04863843.1| possible amidase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734990|ref|ZP_04869155.1| possible amidase [Staphylococcus aureus subsp. aureus TCH130] gi|257793746|ref|ZP_05642725.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9781] gi|258408888|ref|ZP_05681170.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9763] gi|258421008|ref|ZP_05683939.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9719] gi|258430020|ref|ZP_05688390.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9299] gi|258443462|ref|ZP_05691804.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8115] gi|258445320|ref|ZP_05693511.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A6300] gi|258447884|ref|ZP_05696018.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A6224] gi|258453317|ref|ZP_05701302.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A5937] gi|269203553|ref|YP_003282822.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus ED98] gi|282894567|ref|ZP_06302795.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8117] gi|282928073|ref|ZP_06335680.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A10102] gi|295407281|ref|ZP_06817080.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8819] gi|296275668|ref|ZP_06858175.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MR1] gi|297208930|ref|ZP_06925334.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246194|ref|ZP_06930045.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8796] gi|300913013|ref|ZP_07130451.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus TCH70] gi|23821579|sp|Q8NVT3|GATA_STAAW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56748960|sp|Q6G833|GATA_STAAS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189045262|sp|A6U305|GATA_STAA2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189045263|sp|A5IU67|GATA_STAA9 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|21205011|dbj|BAB95706.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus subsp. aureus MW2] gi|49245162|emb|CAG43628.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus MSSA476] gi|147741442|gb|ABQ49740.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus JH9] gi|149946887|gb|ABR52823.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus JH1] gi|253726564|gb|EES95293.1| possible amidase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727172|gb|EES95901.1| possible amidase [Staphylococcus aureus subsp. aureus TCH130] gi|257787718|gb|EEV26058.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9781] gi|257840335|gb|EEV64797.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9763] gi|257842956|gb|EEV67374.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9719] gi|257849614|gb|EEV73582.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A9299] gi|257851347|gb|EEV75287.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8115] gi|257855838|gb|EEV78762.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A6300] gi|257858816|gb|EEV81685.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A6224] gi|257864525|gb|EEV87268.1| glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus A5937] gi|262075843|gb|ACY11816.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus subsp. aureus ED98] gi|282590137|gb|EFB95218.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A10102] gi|282763054|gb|EFC03186.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8117] gi|285817581|gb|ADC38068.1| Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus 04-02981] gi|294967856|gb|EFG43886.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8819] gi|296886420|gb|EFH25349.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176901|gb|EFH36158.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus A8796] gi|300885791|gb|EFK80998.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus TCH70] gi|312830273|emb|CBX35115.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129290|gb|EFT85284.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus CGS03] gi|329724787|gb|EGG61291.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus aureus subsp. aureus 21172] Length = 485 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 310/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|225869894|ref|YP_002745841.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus equi subsp. equi 4047] gi|254790403|sp|C0M7E8|GATA_STRE4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225699298|emb|CAW92653.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus equi subsp. equi 4047] Length = 488 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L +KDISAVEL + ++ I+ + ++I + + A A D + Sbjct: 3 FNHHTIEELHELLVAKDISAVELTKATLEDIKAREEAVGSFITIACEAALKQAAALDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T +D +++GK N Sbjct: 63 IDPD-NVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVANAYDKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWDH-----SRVPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TVR++A LL IAG D D+ Sbjct: 177 IRQPAAFNGVVGLKPTYGAVSRYGLIAFGSSLDQIGPFAPTVRENAQLLSVIAGSDRKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + Q I+GM + +PKEY + + P I +T + GA I E+S Sbjct: 237 TSAPVQIADYTIKIGQDIKGMKIALPKEYLGEGIDPKIKETVLAAAKHFEKLGAIIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K + ++Y TRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAADAKSLEDIYVKTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PT PT+AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPTAAFEL--DTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLPAIS+PA + +P+GLQLIG + EE ++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPAISIPAGFAD-GLPVGLQLIGPKYSEEVIYQVAVAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|21227329|ref|NP_633251.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina mazei Go1] gi|23821593|sp|Q8PXJ1|GATA_METMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|20905684|gb|AAM30923.1| Glutamyl-tRNA(Gln) amidotransferase, subunit A [Methanosarcina mazei Go1] Length = 476 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/482 (42%), Positives = 310/482 (64%), Gaps = 18/482 (3%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 +M+V++ ++++ K+ SA E+ Y++ I+ S ++N Y+ ++ KA A++ DK Sbjct: 4 KWMSVAQVKEKI--KESSAEEVTSRYLEVIKKS--KINGYL-TISDKALEQAKKIDKE-- 56 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L G+PI IKD + G+ S IL+G+ P + + V +KL GAV+LGK NM Sbjct: 57 -GHEGPLAGVPIAIKDNISVVGLPNSCGSKILEGYVPPFNAHVIEKLLSAGAVILGKTNM 115 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS ETS++GP +PW + PGGSSGGS+A VA ++G+DTGGS+ Sbjct: 116 DEFAMGSSTETSHFGPTANPWDL-----ERVPGGSSGGSAAVVAAGEAPFALGSDTGGSV 170 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF G VG+KPTYG SR G++++A SL+Q G + V D A+L+ IAGYD D+T Sbjct: 171 RCPASFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDRRDST 230 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ +Y++AL ++G+ +G+PKE+ + + P ++K I + GA E+S+ Sbjct: 231 SIDSKT-EYQKALVDDVKGLKIGVPKEFFGEGIHPDVEKAVWDAIHKCESLGATWEEVSM 289 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PH +YAL +YYII+ +EASSNLAR+DG RYG R G++ M TR+ GFG EVK RI+ Sbjct: 290 PHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRRIL 349 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ +D +YL+A K+RTL+K+DF +A + VD+++ PT P AF +G++ + Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSK-VDLLMAPTMPNPAFKIGEKIEDPL 408 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ++ +D+ T +N+AG+P+ISVP + +P+GLQ++G+PF EET+ EK Sbjct: 409 TL--YLSDINTCPINLAGVPSISVPCGFTD-GLPIGLQIMGKPFDEETVLRAAYTFEKNT 465 Query: 485 GY 486 Y Sbjct: 466 DY 467 >gi|300783595|ref|YP_003763886.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Amycolatopsis mediterranei U32] gi|299793109|gb|ADJ43484.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Amycolatopsis mediterranei U32] Length = 505 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 318/487 (65%), Gaps = 18/487 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E ++ S+++SAVE+ +++ I + ++A++ V + A AAA+ D Sbjct: 1 MTELIKLTAAELAGKIHSREVSAVEVTQAHLDRIAEVDDHIHAFLHVDTEGALAAAKAVD 60 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + +G A L G+P+ +KD T+G+ T S L+G+ P Y++TVT+KL + G V+ Sbjct: 61 EGLADGKAPASPLAGVPLALKDVLTTEGVPTTCGSKTLEGWLPPYDATVTRKLREAGVVI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YGP +PW PGGS GGSSA++A F A +IGT Sbjct: 121 LGKTNMDEFAMGSSTENSAYGPTHNPWDHAR-----IPGGSGGGSSASIAAFEAAIAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQP S TGTVG+KPTYG SR G+++F+ SLDQAG RTV D+A+L + IAGY Sbjct: 176 DTGGSIRQPGSVTGTVGVKPTYGGVSRYGLVAFSSSLDQAGPCARTVLDAALLHEVIAGY 235 Query: 239 DECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T ++ PVP A Q ++G+ VG+ KE+ D P + +++Q + L+ Sbjct: 236 DPRDSTSIDTPVPPVVAAARQGMTGDLKGVKVGVVKEFGGDGYQPGVLRSFQAAVEQLRA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR 351 GA +VE+S P+ YALPAYY+I+P+E SSNLAR+D +RYGLRV E+ TR Sbjct: 296 LGADVVEVSCPNFVYALPAYYLIAPSECSSNLARFDAMRYGLRVADDGTHSAEEVMSLTR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RIM+GTY LSS YD++Y A+K+RTLI RDF AFEQ VDV+++PTTPT Sbjct: 356 EKGFGAEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFDAAFEQ-VDVLVSPTTPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF +G+ ++ M D+ T+ N+AG A+SVP+ L E +P+GLQ++ + Sbjct: 415 TAFKIGERVDD--PMAMYLADLCTIPSNLAGNAAMSVPSGLSDEDGLPVGLQIMAPALAD 472 Query: 471 ETLFSVG 477 + L+ VG Sbjct: 473 DRLYRVG 479 >gi|256830659|ref|YP_003159387.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfomicrobium baculatum DSM 4028] gi|256579835|gb|ACU90971.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfomicrobium baculatum DSM 4028] Length = 488 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/486 (45%), Positives = 321/486 (66%), Gaps = 15/486 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L ++++ RD LR+ +I+A E S + I + +++A + V ++A A A+ D Sbjct: 1 MSQLFHHSLTQIRDLLRAGEITAREATASCLDRIAATEPRLDALLHVAGEEALAQAKSMD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 DA+ L G+P+ IKD AT G+ T S IL+ F P Y++ +L + GA++L Sbjct: 61 AH--GPDAKKPLWGVPVIIKDVLATVGMPTTCGSKILENFVPVYDADCVTRLKEAGAIIL 118 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K NMDEFAMGSS E S + +PW D T PGGSSGGS+A+VA C ASIGTD Sbjct: 119 AKANMDEFAMGSSTENSAFKVTKNPW---DVTR--VPGGSSGGSAASVAAGQCFASIGTD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KP+YGR SR G+I++ SLDQAG +TRTV D+A +L+ IAG+D Sbjct: 174 TGGSIRQPASFCGIVGVKPSYGRVSRRGLIAYGSSLDQAGPMTRTVADAAEILQVIAGHD 233 Query: 240 ECDATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ PVPDY +AL++ S++G+ +G+P++Y + LS +D + + GA Sbjct: 234 PKDSTSVDTPVPDYLKALNRGGSLKGLRLGMPEQYWGEGLSTEVDAACRSAVELAVSLGA 293 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +IV +SLPHT+YA+ YYI++ AEASSNLAR+DGVRYG R + +D+ MY +RS GFG Sbjct: 294 QIVPVSLPHTEYAIATYYILAMAEASSNLARFDGVRYGRRSSQTQDLATMYTRSRSEGFG 353 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +EV RIM+GTYVLS+ YD++Y +A ++R LI++DF A ++ D+I P PT+AF + Sbjct: 354 EEVMRRIMLGTYVLSAGYYDAYYRKAAQVRRLIRQDFLNALDK-CDLICGPACPTTAFAI 412 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFS 475 G EN + + D+FT+++N++GLP +S+P L + MP+GLQL E +L S Sbjct: 413 G--ENTADPLQMYLTDIFTISLNLSGLPGLSLPVGLGKDTGMPVGLQLFAGNMDEASLLS 470 Query: 476 VGQIIE 481 Q +E Sbjct: 471 AAQTLE 476 >gi|282917247|ref|ZP_06325002.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus D139] gi|282318874|gb|EFB49229.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Staphylococcus aureus subsp. aureus D139] Length = 485 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/464 (45%), Positives = 311/464 (67%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADANDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + + + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVKNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|157882112|pdb|2F2A|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Gln Length = 486 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/464 (46%), Positives = 310/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|167465164|ref|ZP_02330253.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Paenibacillus larvae subsp. larvae BRL-230010] Length = 485 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/484 (44%), Positives = 312/484 (64%), Gaps = 11/484 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + + RL D+S +LV+ + IE + ++ A +++ + AR A D+R G Sbjct: 6 LRLQDIHKRLSEGDLSVTDLVEESYRRIEEVDGKVRALLKLDEENARRTATVLDERRREG 65 Query: 67 DARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L G+P+GIKD TKG+ T S L F P Y++TV +L + AV +GKLNMD Sbjct: 66 GERGLLFGLPVGIKDNIVTKGVTTTCGSQFLSDFEPIYDATVVTRLQEAQAVPIGKLNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG SNE S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIR Sbjct: 126 EFAMGGSNENSSFHPTYNPWNL-----EHVPGGSSGGSAAAVAAGEVYFALGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA++ G VG+KPTYG SR G+++FA SLDQ G +T+ V DSA +L+AIAG+D+ D+T Sbjct: 181 QPAAYCGIVGLKPTYGLVSRFGLVAFASSLDQIGPLTKNVEDSAYVLQAIAGHDKMDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P+PDY AL ++G+ + +PKEY + + P + + + + L+ GA E+SLP Sbjct: 241 AQAPIPDYLSALTGDVKGLRIAVPKEYLGEGIDPKVKEAVLEALKVLEGLGASWEEVSLP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIM 364 H++YA+ AYY+++ +EASSNLAR+DG+RYG R E +LE+Y +RS GFG EVK RIM Sbjct: 301 HSRYAVAAYYLLASSEASSNLARFDGIRYGKRTENASGLLELYTYSRSEGFGSEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LSS YD++YL+A+K+RTLIK+DF + F DVIL PT PT AF +G + + Sbjct: 361 LGTYALSSGYYDAYYLKAQKVRTLIKQDFDQVFAD-YDVILGPTAPTPAFKIGAQVGDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +M ND+ T+ V++AG+PAISVP + +P+GLQ+IG+ E T+ V E+ Sbjct: 420 TM--YLNDILTIPVSLAGIPAISVPCGFAD-DLPVGLQIIGKGLDESTVLRVAHAFEQHT 476 Query: 485 GYFR 488 + + Sbjct: 477 EHHK 480 >gi|256844673|ref|ZP_05550158.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus crispatus 125-2-CHN] gi|256613214|gb|EEU18418.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus crispatus 125-2-CHN] Length = 479 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/474 (46%), Positives = 310/474 (65%), Gaps = 18/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S D+SA +L + I++++ ++NA+I V+ A+ +D ++ L GI Sbjct: 14 KLASGDLSADKLAKDTVANIKDTDKKLNAWITVLDD-----AKPADN--LDYSKSKLAGI 66 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD T GI T A SHIL + P Y++TV KL G +GK NMDEFAMGSS E Sbjct: 67 PIAIKDNIITNGIKTTAASHILYNYMPMYDATVISKLKKAGVTFVGKTNMDEFAMGSSTE 126 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 SYYG +PW + DK PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 127 HSYYGATHNPW----NLDK-VPGGSSGGSAAAVASGQVVAALGSDTGGSIRQPAAFNGIF 181 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPTYGR SR G+I+F SLDQ G++T+ V+DSA +L IAG DE D+T VPD+ Sbjct: 182 GIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGADEHDSTVSTREVPDFT 241 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + Q ++G+ V +PKEY ++ + + + Q+ I LKDAGA I E+SLPHT+Y +P Y Sbjct: 242 KFIGQDVKGLRVAVPKEY-MEAVDGKMREVIQKQIDALKDAGAVINEVSLPHTKYVVPDY 300 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ +EASSNL RYDG+RYG R + K++L++Y +RS FG EVK RIM+G++ LS+ Sbjct: 301 YIIASSEASSNLQRYDGIRYGYRAKDTKNLLDVYVKSRSECFGAEVKRRIMLGSFALSAG 360 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD + +A K+RTLI DF + F + DVI+ PTT AF +G+E ++ M + ND+ Sbjct: 361 SYDRFFRQAAKVRTLICDDFDKIFAEN-DVIVGPTTTEPAFGIGEEVSDPIKMYN--NDI 417 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T++ N+AG+PA SVPA L + MP+GLQ++ + F E +F IE+ ++ Sbjct: 418 LTISANLAGIPAASVPAGLVD-GMPVGLQVMAKRFDEGNVFKTADFIERTNKFY 470 >gi|257865966|ref|ZP_05645619.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC30] gi|257872299|ref|ZP_05651952.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC10] gi|257799900|gb|EEV28952.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC30] gi|257806463|gb|EEV35285.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC10] Length = 490 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/487 (44%), Positives = 314/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ E L SK+I+A +L I+ + +++A++ + +KA+ A+ D Sbjct: 1 MTELYKKSLEELHSLLVSKEITATDLTSETFARIKETEPKVDAFLALNEEKAQELAQAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I ++ L GIPIGIKD TK + T A S IL F P Y++TV K++ + +G Sbjct: 61 QKGIT-ESNVLAGIPIGIKDNIVTKDLRTTAASKILGNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG+S ETS++ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGASTETSFFKKTKNAW---DETK--VPGGSSGGSAAAVAAGQVPLSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A L AI+G+D Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRGVKDNAFALNAISGFDA 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPD+ L I+GM V +PKEY + + + + + + GA + Sbjct: 235 KDSTSAGAAVPDFTAGLTGDIKGMKVALPKEYLGEGIQAGVREAILKAADTFRALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRSENVNNLEDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIK+DF + F Q D+I+ P +PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKQDFDKVFSQ-YDLIIGPASPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YLNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKHFDEATMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|226322860|ref|ZP_03798378.1| hypothetical protein COPCOM_00632 [Coprococcus comes ATCC 27758] gi|225208646|gb|EEG91000.1| hypothetical protein COPCOM_00632 [Coprococcus comes ATCC 27758] Length = 496 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/481 (43%), Positives = 299/481 (62%), Gaps = 10/481 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E ++++K+++ E V++ I+ ++N+++ + + A AEE K Sbjct: 2 DLKGLTAVELGKKIQAKEVTVKEAVEACFAQIDKVEKEVNSFVSLQKEAALKRAEEVQKL 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G L G+P+ IKD T+G+ T S IL F P + + L GAV++GK Sbjct: 62 IDDGTLTGPLAGVPVAIKDNMCTEGVTTTCSSKILSNFVPTFSAEAVLNLEKAGAVVIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ ETSYYG +PW + PGGSSGGS AAVA ++G+DTG Sbjct: 122 TNMDEFAMGSTTETSYYGETKNPWNL-----EHVPGGSSGGSCAAVATLEVPYALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP+S+ G VGIKPTYG SR G+I++ SLDQ G + R V D A +L+ IA +D Sbjct: 177 GSIRQPSSYCGIVGIKPTYGTVSRYGLIAYGSSLDQIGPVARDVTDCATVLETIASHDVK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V D+ AL ++GM +GIPK+Y + L + K + LK+AGA+I E Sbjct: 237 DSTSVERQDTDFTSALVNDVKGMKIGIPKDYFGEGLDEEVKKPILEAAEVLKNAGAEIEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 L +YA+PAYY+I+ AEASSNL+R+DGV+YG R + +++ +MY+ TRS GFG EVK Sbjct: 297 FDLGLVKYAIPAYYVIASAEASSNLSRFDGVKYGYRTKDYEELHQMYKKTRSEGFGPEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+G++VLSS YD++YL+A + + LIK+ F AF + D+IL P PT+A LG Sbjct: 357 RRIMLGSFVLSSGYYDAYYLKALRTKALIKKAFDSAFAK-YDMILAPAAPTTAPKLGASL 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D++T++VN+AGLP IS+P K +P+G+QLIG F+E+ LF Sbjct: 416 SDPIKM--YLGDIYTISVNLAGLPGISIPVGRDAKGLPVGMQLIGDCFQEKKLFQAAYTY 473 Query: 481 E 481 E Sbjct: 474 E 474 >gi|257452526|ref|ZP_05617825.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_5R] gi|317059067|ref|ZP_07923552.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_5R] gi|313684743|gb|EFS21578.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fusobacterium sp. 3_1_5R] Length = 485 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 211/487 (43%), Positives = 316/487 (64%), Gaps = 12/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ M E + + AVE+V+++ Q IE S++N+++ + +K A++ D Sbjct: 1 MKKIYEMTAKELHQSFLAGEYRAVEIVEAFFQRIEAVESKINSFVSLRKEKVLEEAKQLD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ ++G + L G+ + +KD +G A S IL+ + Y++TV KL + A++L Sbjct: 61 EKKLSGKELGSLAGVVVALKDNMLCQGEKVTAASKILENYEGIYDATVVSKLKEADALIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMG + +TSY+ +P+ D T PGGSSGG+++++A ++G+D Sbjct: 121 GFTNMDEFAMGGTTKTSYHKMTANPY---DITR--VPGGSSGGAASSIAAQQVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KP+YGR SR G+++FA SLDQ G + + V D A + IAG D Sbjct: 176 TGGSIRQPASFCGVVGLKPSYGRVSRYGLMAFASSLDQIGPLAKNVEDIAYAMNVIAGTD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DAT + VPDY L + I+GM +G+PKEY ++ + + + + I LK GA+I Sbjct: 236 DYDATVEEVEVPDYTSFLGKEIRGMKIGVPKEYFIEGIRAEVKEIIMKSIDTLKSLGAEI 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 +EISLPHT+YA+P YY+++PAEASSNLAR+DGVRYG R E ++I ++Y N+R+ GFG E Sbjct: 296 IEISLPHTKYAVPTYYVLAPAEASSNLARFDGVRYGYRSENSQNIEDLYINSRTEGFGDE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIGTYVLS+ YD+++ +A+K+R LI+ DF +AFE VDVI+TP P+ AF L + Sbjct: 356 VKRRIMIGTYVLSAGFYDAYFKKAQKVRRLIQEDFIKAFET-VDVIVTPVAPSPAFQLSE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ + D+FT+ N+AG+P +SVPA L +P+G+Q +G+ F E L VG Sbjct: 415 QKT---PIELYLEDIFTIPANLAGIPGLSVPAGLA-GGLPVGIQFLGKAFHEGDLLQVGS 470 Query: 479 IIEKEAG 485 EK G Sbjct: 471 AFEKARG 477 >gi|257875593|ref|ZP_05655246.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC20] gi|257809759|gb|EEV38579.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC20] Length = 490 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/487 (44%), Positives = 313/487 (64%), Gaps = 11/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ E L SK+I+A +L I+ + +++A++ + +KA+ A+ D Sbjct: 1 MTELYKKSLEELHSLLVSKEITATDLTSETFARIKETEPKVDAFLALNEEKAQELAQAID 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ I ++ L GIPIGIKD TK + T A S IL F P Y++TV K++ + +G Sbjct: 61 QKGIT-ESNVLAGIPIGIKDNIVTKDLRTTAASKILGNFDPIYDATVMDKVYQADMIPVG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMG+S ETS++ + W D T PGGSSGGS+AAVA S+G+DT Sbjct: 120 KLNMDEFAMGASTETSFFKKTKNAW---DETK--VPGGSSGGSAAAVAAGQVPLSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V+D+A L AI+G+D Sbjct: 175 GGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFASSLDQIGPMTRGVKDNAFALNAISGFDA 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T VPD+ L I+GM V +PKEY + + + + + + GA + Sbjct: 235 KDSTSAGAAVPDFTAGLTGDIKGMKVALPKEYLGEGIQAGVREAILKAADTFRALGATVE 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPH++Y + YYII+ +EASSNL R+DG+RYG R E LE +Y N+RS GFG+EV Sbjct: 295 EVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRSENVSNLEDVYVNSRSEGFGEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD+++ +A ++RTLIK+DF + F Q D+I+ P +PT AF +G+ Sbjct: 355 KRRIMLGTFSLSAGYYDAYFKKAGQVRTLIKQDFDKVFSQ-YDLIIGPASPTVAFGIGEN 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M ND+ T+ VN+AGLP +S+PA E +P+GLQ+IG+ F E T++ Sbjct: 414 INDPITM--YLNDILTIPVNLAGLPGMSIPAGFSE-GLPVGLQIIGKQFDEATMYKAAYA 470 Query: 480 IEKEAGY 486 E+ + Sbjct: 471 FEQATDF 477 >gi|329936843|ref|ZP_08286522.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces griseoaurantiacus M045] gi|329303768|gb|EGG47652.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces griseoaurantiacus M045] Length = 497 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/488 (45%), Positives = 325/488 (66%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + +E+ ++ S +++AVE+ ++++ IE + +++A++ V + A A A D Sbjct: 1 MSDIIKLTAAETAAKIASGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+GI T S IL+G+ P Y++T+T++L D V+L Sbjct: 61 EKRARGEELGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATLTKRLKDADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A + +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALAAHMAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S++GM VG+ K++R + + + + + ++ LK+ GA+ Sbjct: 236 PLDSTSIDAPVPPVVEAARNGSVEGMRVGVVKQFRGEGYQAGVIQRFDESVALLKELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+DG+RYG R G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDGLRYGRRT-GDDGSHSAEEVTSLTREAG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS YD++Y A+K+RTLIK+DF +AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLIKQDFEKAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 414 AIGERADD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPALKDDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|322383061|ref|ZP_08056889.1| aspartyl/glutamyl-tRNA amidotransferase subunit A-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152830|gb|EFX45455.1| aspartyl/glutamyl-tRNA amidotransferase subunit A-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 478 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/476 (45%), Positives = 309/476 (64%), Gaps = 11/476 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE-G 73 RL D+S +LV+ + IE + ++ A +++ + AR A D+R G R L G Sbjct: 7 RLSEGDLSVTDLVEESYRRIEEVDGKVRALLKLDEENARRTATVLDERRREGGERGLLFG 66 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+GIKD TKG+ T S L F P Y++TV +L + AV +GKLNMDEFAMG SN Sbjct: 67 LPVGIKDNIVTKGVTTTCGSQFLSDFEPIYDATVVTRLQEAQAVPIGKLNMDEFAMGGSN 126 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S + P +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPA++ G Sbjct: 127 ENSSFHPTYNPWNL-----EHVPGGSSGGSAAAVAAGEVYFALGSDTGGSIRQPAAYCGI 181 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+++FA SLDQ G +T+ V DSA +L+AIAG+D+ D+T P+PDY Sbjct: 182 VGLKPTYGLVSRFGLVAFASSLDQIGPLTKNVEDSAYVLQAIAGHDKMDSTSAQAPIPDY 241 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 AL ++G+ + +PKEY + + P + + + + L+ GA E+SLPH++YA+ A Sbjct: 242 LSALTGDVKGLRIAVPKEYLGEGIDPKVKEAVLEALKVLEGLGASWEEVSLPHSRYAVAA 301 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+++ +EASSNLAR+DG+RYG R E +LE+Y +RS GFG EVK RIM+GTY LSS Sbjct: 302 YYLLASSEASSNLARFDGIRYGKRTENASGLLELYTYSRSEGFGSEVKRRIMLGTYALSS 361 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++YL+A+K+RTLIK+DF + F DVIL PT PT AF +G + + +M ND Sbjct: 362 GYYDAYYLKAQKVRTLIKQDFDQVFAD-YDVILGPTAPTPAFKIGAQVGDPLTM--YLND 418 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + T+ V++AG+PAISVP + +P+GLQ+IG+ E T+ V E+ + + Sbjct: 419 ILTIPVSLAGIPAISVPCGFAD-DLPVGLQIIGKGLDESTVLRVAHAFEQHTEHHK 473 >gi|2589195|gb|AAB83964.1| Glu-tRNAGln amidotransferase subunit A [Bacillus subtilis subsp. subtilis str. 168] Length = 486 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/467 (46%), Positives = 309/467 (66%), Gaps = 18/467 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+I +LVD + I+ + ++ A++ + ++ARA A+E D+ + D Sbjct: 8 ITELKQLIHKKEIKISDLVDESYKRIQAVDDKVQAFLALDEERARAYAKELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV Q+L D AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKLTKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDST 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ +L I+G+ + +PKEY + + ++ + L+ GA E+SL Sbjct: 240 SANVDVPDFLSSLTGDIKGLKIAVPKEYLGEGVGKEARESVLAALKVLEGLGATWEEVSL 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRI 363 PH++YAL YY++S +EAS+NLAR+DG+RYG R + D ++++Y+ TR+ GFG EVK RI Sbjct: 300 PHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQTRAEGFGNEVKRRI 359 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+K+RTLIK+DF + FE+ DVI+ PTTPT AF +G EN Sbjct: 360 MLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEK-YDVIVGPTTPTPAFKIG--ENTK 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + ND+ T+ VN+A A +PLGLQ+IG+ F E Sbjct: 417 DPLTMYANDILTIPVNLAAYRESG--AMRLADGLPLGLQIIGKHFDE 461 >gi|86609068|ref|YP_477830.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. JA-2-3B'a(2-13)] gi|109891993|sp|Q2JL51|GATA_SYNJB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|86557610|gb|ABD02567.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 510 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/475 (46%), Positives = 304/475 (64%), Gaps = 11/475 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 +L +K+ SA E+ Y++ + Q+ ++I V + A A D RI G+A L G Sbjct: 10 QLVTKERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQARAVDARIRAGEAIGPLAG 69 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ +KD T+GI T S +L+GF P YESTVT +L G V +GK N+DEFAMGSS Sbjct: 70 IPLAVKDNLCTQGIRTTCASRMLEGFIPPYESTVTARLAAAGMVTVGKTNLDEFAMGSST 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIRQPA+F G Sbjct: 130 ENSAFQRTANPW---DLTR--VPGGSSGGSAAAVAADQAVVALGSDTGGSIRQPAAFCGV 184 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+++FA SLDQ G RTV D A+LL+ IAG+D D+T + + +PDY Sbjct: 185 VGLKPTYGLVSRYGLVAFASSLDQVGPFGRTVEDVALLLQGIAGHDPMDSTSLKVDIPDY 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +AL I+G +G+ ++ + Q I L++ GA+I+EI P +Y L Sbjct: 245 SQALIPDIKGFKIGVIRDLLGEGCGEETRAAVQAAIQHLQELGAEILEIDCPSFRYGLAT 304 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YYII+P+EAS+NLARYDGV+YGLR +L MY TR+ GFG EVK RIMIGTY LSS Sbjct: 305 YYIIAPSEASANLARYDGVKYGLREPADSLLSMYGKTRAHGFGPEVKRRIMIGTYALSSG 364 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+K+RTLIK+DF +AFE+ VDV+++PTTPT AF LG+ E+ + D+ Sbjct: 365 YYDAYYLKAQKVRTLIKQDFLKAFEK-VDVLVSPTTPTPAFKLGERED---PLSMYLCDL 420 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +S+P + +P+GLQ++G +E + V E+ + + Sbjct: 421 MTIPVNLAGLPGLSLPCGFAD-GLPIGLQIVGNALQESKVLRVAYAYEQSTDWHK 474 >gi|172058516|ref|YP_001814976.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Exiguobacterium sibiricum 255-15] gi|229485880|sp|B1YM01|GATA_EXIS2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|171991037|gb|ACB61959.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Exiguobacterium sibiricum 255-15] Length = 480 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/472 (45%), Positives = 311/472 (65%), Gaps = 11/472 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ ++ ELV I+ + ++ A++ + + A A+ D+ I +A L G+P Sbjct: 15 VKDGEVKVSELVQESFDRIDRVDGKIGAFLSL-NEDAFEQAKRMDE-IAKHEANPLFGLP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 IG+KD TKG+ T S L+ F P +++TV ++L + GA+ +GKLNMDEFAMGSSNE Sbjct: 73 IGVKDNIVTKGMTTTCGSKFLENFVPAHDATVVERLHEAGAITIGKLNMDEFAMGSSNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S Y PV +PW + K PGGSSGGS+AAVA S+G+DTGGSIRQPA++ G VG Sbjct: 133 SAYKPVRNPWNT-----KHVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+++FA SLDQ G +TRTV D+A LL AIAG+ + D+T N+ DY + Sbjct: 188 LKPTYGLVSRYGLVAFASSLDQIGPLTRTVEDNAYLLSAIAGHCDMDSTSANVNPTDYTQ 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL I+G+ + +PKEY + +S + + + I L+ GA + E+SLP+++YAL YY Sbjct: 248 ALTGDIKGLKIAVPKEYFGEGISEGVKENIRAAIKKLESLGATVDEVSLPNSKYALATYY 307 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 +++ +EASSNLAR+DG+RYG+R E + ++++ +R+ GFG EVK RIM+GTY LSS Y Sbjct: 308 LLASSEASSNLARFDGIRYGVRAEADALEDVFKYSRAQGFGDEVKRRIMLGTYALSSGYY 367 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 D++Y +A++ RTLIK DF + DVI+ PT PT AF LG + ++ +M ND+ T Sbjct: 368 DAYYKKAQQARTLIKHDFDQVLAN-YDVIIGPTAPTPAFELGAQNDDPVTM--YANDILT 424 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 + +N+AG+PAISVPA L + +P+GLQ+IG+ F E T++ E G F Sbjct: 425 IPINLAGVPAISVPAGLVD-GLPVGLQIIGKHFDEATIYRAAHAFELATGGF 475 >gi|116510995|ref|YP_808211.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactococcus lactis subsp. cremoris SK11] gi|123125925|sp|Q032T3|GATA_LACLS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116106649|gb|ABJ71789.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactococcus lactis subsp. cremoris SK11] Length = 486 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/485 (44%), Positives = 311/485 (64%), Gaps = 11/485 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N ++ E + L +K+ISA+EL + + I+ Q++A+++V +KA A D R I Sbjct: 4 NNKSIKELHELLVNKEISALELTKATLSDIQAREPQIDAFLKVTEEKALKEAAAIDARGI 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D +GI IG+KD T+GI T A S IL G+ P Y +TV KL +G + +GKLNM Sbjct: 64 NPDVV-TDGISIGVKDNIVTEGIETTAASKILGGWIPPYNATVANKLSQSGLITIGKLNM 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG S E S P + W D T PGGSS GS+A+VA S+G+DTGGSI Sbjct: 123 DEFAMGGSGENSSIKPTKNVW---DQTK--VPGGSSSGSAASVASGEVRLSLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +T TV ++A LL I+G+D+ D+T Sbjct: 178 RQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTPTVEENAQLLNVISGFDKNDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ + Q I+GM + +PKEY + + + + L+ GA + E+SL Sbjct: 238 SSNVSVPDFTSKIGQDIKGMKIALPKEYFGEGIDEKVKEQILAAAKHLEKLGAIVEEVSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 PH++Y + YYII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EV+ RI Sbjct: 298 PHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDIKNLEDLYVKSRSEGFGPEVQRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LS+ YD H+ +A ++RTLI DF + FE+ D+IL PTTPT+A+ LG ++ Sbjct: 358 MLGTFSLSAGSYDKHFKKAGQVRTLIINDFAKVFEK-YDLILGPTTPTAAWDLGARVDDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM D+ T+ VN+AGLP IS+PA + +P+G+QLIG+ + EET++ V E Sbjct: 417 ISM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGMQLIGKRYDEETIYQVAAAFEAT 473 Query: 484 AGYFR 488 + + Sbjct: 474 TDFHK 478 >gi|12052882|emb|CAB66614.1| hypothetical protein [Homo sapiens] Length = 528 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 208/493 (42%), Positives = 301/493 (61%), Gaps = 27/493 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKAKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPWR---------------SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +GPV +PW + +D GGS GGS+AAV+ F C A++G+D Sbjct: 132 DGVFGPVKNPWSYSKRYREKRKQNPHSENEDSDWLITGGSPGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L A+AG D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPD 251 Query: 240 ECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ P+ P +L + + +GIPKEY + LS + W + + GA Sbjct: 252 PRDSTTVHEPINKPFMLPSL-ADVSKLCIGIPKEYLVPELSSEVQSLWSKAADLFESEGA 310 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFG 356 K++E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 KVIEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDIDVSTEAMYAATRREGFN 370 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 V+ RI+ G + L Y++++++A+K+R LI DF AF GVDV+LTPTT + A P Sbjct: 371 DVVRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPY 430 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L Sbjct: 431 LEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQL 487 Query: 474 FSVGQIIEKEAGY 486 +V + EK+ + Sbjct: 488 LTVAKWFEKQVQF 500 >gi|82751554|ref|YP_417295.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus RF122] gi|109891986|sp|Q2YU51|GATA_STAAB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|82657085|emb|CAI81522.1| glutamyl-tRNA amidotransferase subunit A [Staphylococcus aureus RF122] Length = 485 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/465 (45%), Positives = 311/465 (66%), Gaps = 13/465 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDVYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+ F P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEEFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSY+ ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSYFKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T ++ D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSASVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVA 469 >gi|262281195|ref|ZP_06058977.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter calcoaceticus RUH2202] gi|262257426|gb|EEY76162.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter calcoaceticus RUH2202] Length = 492 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 224/479 (46%), Positives = 316/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y+Q I +SQ+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLQRIAKLDSQVKSYVTVTPEQALRDADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S ILD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKILDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERAL-DQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L + S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLSNTSVKGLRIGIPKQYFNVVGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGHRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|330969667|gb|EGH69733.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. aceris str. M302273PT] Length = 483 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/473 (45%), Positives = 309/473 (65%), Gaps = 10/473 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L K S+ EL + I + Q+N++I + A A+ +D R G Sbjct: 4 MTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK NMDE Sbjct: 64 ENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQ Sbjct: 124 FAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+T + Sbjct: 179 PAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSI 238 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+SLP+ Sbjct: 239 DEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVSLPN 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 ++A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ RIM+ Sbjct: 299 LRHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + ++ Sbjct: 359 GAYALSAGYYDAYYLQAQKIRRLIKNDFMNAFAD-VDVILGPTTPNPAWKIGAKTHD--P 415 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 416 IAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 467 >gi|299535241|ref|ZP_07048565.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lysinibacillus fusiformis ZC1] gi|298729362|gb|EFI69913.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lysinibacillus fusiformis ZC1] Length = 487 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/489 (45%), Positives = 315/489 (64%), Gaps = 15/489 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + E + +++ ++S +L + I + + A++ +KA A A E DK + + Sbjct: 7 SAKELQAEIKAGNLSIADLTKEAYERIAKLDGDVQAFLASNEEKATAQAAEMDK--VPFE 64 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 R L G+PIG+KD T+G+ T S IL+GF P Y++TV KL + G + +GKLNMDE Sbjct: 65 KRGPLFGLPIGVKDNIVTEGLETTCASKILEGFMPIYDATVVNKLREAGMITVGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNE SYY +PW PGGSSG S+AAVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSNENSYYKTTKNPWNL-----NHVPGGSSGASAAAVAAGEVPFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA++ G VG+KPTYGR SR G+++FA SLDQ G ITR V D+A+LL+AIAG D D+T Sbjct: 180 PAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNALLLEAIAGLDPNDSTSA 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ VP+Y AL ++G+ + +PKE+ + + ++ + LK GA + E+SLPH Sbjct: 240 NVEVPNYAAALTGDVKGLRIAVPKEFLGEGVGEAARQSVLAALEVLKGLGATVEEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 ++YAL AYYI+S +EASSNL+R+DG+RYG R E +++++Y+ TR+ GFG EVK RIM+ Sbjct: 300 SKYALAAYYILSSSEASSNLSRFDGIRYGFRAENVTNLMDLYKETRAQGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++Y +A++ RTLIK D+ + FE DVI+ PT PT AF +G EN Sbjct: 360 GTYSLSAGTYDAYYKKAQQARTLIKADYDKVFED-FDVIIGPTAPTPAFKIG--ENVDDP 416 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ T+ +N+AG+PAIS+P E +PLGLQ+IG+ F E T++ V E+ Sbjct: 417 MTMYANDILTIPMNLAGVPAISIPCGF-ENGLPLGLQIIGKYFDEATIYRVAHAFEQATE 475 Query: 486 YFR--PHKW 492 + + P W Sbjct: 476 FHKEVPQMW 484 >gi|125623053|ref|YP_001031536.1| amidase [Lactococcus lactis subsp. cremoris MG1363] gi|166217676|sp|A2RHP5|GATA_LACLM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|124491861|emb|CAL96782.1| amidase [Lactococcus lactis subsp. cremoris MG1363] gi|300069800|gb|ADJ59200.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactococcus lactis subsp. cremoris NZ9000] Length = 486 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/485 (44%), Positives = 310/485 (63%), Gaps = 11/485 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N ++ E + L +K+ISA+EL + + I+ Q++A+++V +KA A D R I Sbjct: 4 NNKSIKELHELLVNKEISALELTKATLSDIQAREPQIDAFLKVTEEKALKEAAAIDARGI 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D +GI IG+KD T+GI T A S IL G+ P Y +TV KL +G + +GKLNM Sbjct: 64 NPDVV-TDGISIGVKDNIVTEGIETTAASKILGGWIPPYNATVANKLSQSGLITIGKLNM 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG S E S P + W D T PGGSS GS+A+VA S+G+DTGGSI Sbjct: 123 DEFAMGGSGENSSIKPTKNAW---DQTK--VPGGSSSGSAASVASGEVRLSLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +T TV ++A LL I+G+D+ D+T Sbjct: 178 RQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTPTVEENAQLLNVISGFDKNDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ + Q I+GM + +PKEY + + + + L+ GA + E+SL Sbjct: 238 SSNVAVPDFTSKIGQDIKGMKIALPKEYFGEGIDEKVKEQILAAAKHLEKLGAIVEEVSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 PH++Y + YYII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EV+ RI Sbjct: 298 PHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDIKNLEDLYVKSRSEGFGPEVQRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LS+ YD H+ +A ++RTLI DF + FE+ D+IL PTTPT A+ LG ++ Sbjct: 358 MLGTFSLSAGSYDKHFKKAGQVRTLIINDFAKVFEK-YDLILGPTTPTPAWDLGARVDDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM D+ T+ VN+AGLP IS+PA + +P+G+QLIG+ + EET++ V E Sbjct: 417 ISM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGMQLIGKRYDEETIYQVAAAFEAT 473 Query: 484 AGYFR 488 + + Sbjct: 474 TDFHK 478 >gi|260662795|ref|ZP_05863689.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus fermentum 28-3-CHN] gi|260552876|gb|EEX25875.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus fermentum 28-3-CHN] Length = 487 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/477 (45%), Positives = 315/477 (66%), Gaps = 14/477 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K +SA EL + I+ ++ Q+ A++ + + A A E D+ I D L GIP Sbjct: 15 LVAKKVSATELTKAAFDRIKATDDQVGAFLALNGEAALKQAAELDQVGIAEDQL-LAGIP 73 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD TKG+ T A S IL+ F+P Y++TV +KL GA+ +GK+N+DEFAMGSS E Sbjct: 74 LAVKDNIVTKGLTTTAASKILENFKPVYDATVVEKLNAAGAINVGKVNLDEFAMGSSTEN 133 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIR PASFTGTVG Sbjct: 134 SAFKTTKNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGSDTGGSIRMPASFTGTVG 188 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+F S DQ G +T++V+D+AIL+ AIAG D+ D T N PVPD+ Sbjct: 189 MKPTYGRVSRWGLIAFGSSFDQIGWLTQSVKDNAILMSAIAGKDDRDMTSANQPVPDFAA 248 Query: 256 AL-DQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L DQ+ I+GM + +P+EY ++ L + + + + L+ GA I E+SLPHT+Y +PA Sbjct: 249 GLNDQADIKGMKIAVPREY-MEGLDDDVQEVIEASLKHLESLGATIDEVSLPHTKYGVPA 307 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYI++ +EASSNL R+DG+RYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 308 YYILASSEASSNLQRFDGIRYGFRADDVKNLEDVYVKTRSQGFGDEVKLRIMLGTFSLSA 367 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++ +A K+R LI +DF + + D+I+ PT ++AF +G E + M +ND Sbjct: 368 GFYDAYFNKAAKVRRLIAQDFDDVLKDH-DLIVGPTGTSTAFKIGAEIADPKQM--YFND 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 V TV +NMAGLP +++PA + MP+GLQ+IG+ F E T++ G + E+ + + Sbjct: 425 VLTVTLNMAGLPGMAIPAGFSKDNGMPIGLQMIGKRFDEVTIYKAGYVFEQTTDFHK 481 >gi|227515530|ref|ZP_03945579.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus fermentum ATCC 14931] gi|227086143|gb|EEI21455.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus fermentum ATCC 14931] Length = 487 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/477 (45%), Positives = 315/477 (66%), Gaps = 14/477 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K +SA EL + I+ ++ Q+ A++ + + A A E D+ I D L GIP Sbjct: 15 LVAKKVSATELTKAAFDRIKATDDQVGAFLALNEEAALKQAAELDQAGIAEDQL-LAGIP 73 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD TKG+ T A S IL+ F+P Y++TV +KL GA+ +GK+N+DEFAMGSS E Sbjct: 74 LAVKDNIVTKGLTTTAASKILENFKPVYDATVVEKLNAAGAINVGKVNLDEFAMGSSTEN 133 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIR PASFTGTVG Sbjct: 134 SAFKTTKNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGSDTGGSIRIPASFTGTVG 188 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+F S DQ G +T++V+D+AIL+ AIAG D+ D T N PVPD+ Sbjct: 189 MKPTYGRVSRWGLIAFGSSFDQIGWLTQSVKDNAILMSAIAGKDDRDMTSANQPVPDFAA 248 Query: 256 AL-DQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L DQ+ I+GM + +P+EY ++ L + + + + L+ GA I E+SLPHT+Y +PA Sbjct: 249 GLNDQADIKGMKIAVPREY-MECLDDDVQEVIEASLKHLESLGATIDEVSLPHTKYGVPA 307 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYI++ +EASSNL R+DG+RYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 308 YYILASSEASSNLQRFDGIRYGFRADDVKNLEDVYVKTRSQGFGDEVKLRIMLGTFSLSA 367 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++ +A K+R LI +DF + + D+I+ PT ++AF +G E + M +ND Sbjct: 368 GFYDAYFNKAAKVRRLIAQDFDDVLKDH-DLIVGPTGTSTAFKIGAEIADPKQM--YFND 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 V TV +NMAGLP +S+PA + MP+GLQ+IG+ F E T++ G + E+ + + Sbjct: 425 VLTVTLNMAGLPGMSIPAGFSKDNGMPIGLQMIGKRFDEATIYKAGYVFEQTTDFHK 481 >gi|297156983|gb|ADI06695.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces bingchenggensis BCW-1] Length = 497 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/488 (45%), Positives = 321/488 (65%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE-S 59 M++L S +++ S +++AVE+ ++++ IE + +++A++ V + A A A Sbjct: 1 MADLTKFTASGIAEKIASGEVTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 DKR + L G+P+ +KD F TKGI T S IL+G+ P Y++T+ +L D V+L Sbjct: 61 DKRARGEELGPLAGVPLALKDIFTTKGIPTTVGSKILEGWIPPYDATLVTRLKDADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSA++A F A +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTNNPW---DLTR--IPGGSGGGSSASLASFQAALAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S++GM +G+ KE+ + + + + + + L++ GA+ Sbjct: 236 PLDSTSIDAPVPPVVEAARNGSVRGMRIGVVKEFSGEGYQAGVVQRFNESVELLRELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 +VE+S P AL AYY+I+P+E SSNLAR+DG+RYGLRV G D E+ TR+ G Sbjct: 296 VVELSCPSFDKALAAYYLIAPSECSSNLARFDGLRYGLRV-GDDGSRSAEDVTALTRAEG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS YD++Y A+K+RTLI +DF AFEQ VDV+++PTTPT+AF Sbjct: 355 FGAEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLITQDFQRAFEQ-VDVLVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I ++ L Sbjct: 414 PIGERVDD--PMAMYLADLCTIPANLAGNAAMSLPCGLAPEDGLPVGLQIIAPALADDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|298528463|ref|ZP_07015867.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298512115|gb|EFI36017.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 489 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 311/475 (65%), Gaps = 13/475 (2%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 +R L+ K+I A E+V+ Y+ I + + A + + ++A A E D++ + + + L Sbjct: 11 TRLLLQKKEIKASEVVEEYLDNIRQTEPGIRAMLHIREEEALEEAREMDRQGPDNE-KPL 69 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ IKD T+G T S IL+ F P Y++T+ Q+L GA++LGK NMDEFAMGS Sbjct: 70 WGVPMTIKDVICTRGTPTTCGSRILENFTPGYDATLVQRLRQAGAIILGKTNMDEFAMGS 129 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S +PW PGGSSGGS+A++A SIGTDTGGSIRQPASF Sbjct: 130 STENSALQTTSNPWDL-----SRVPGGSSGGSAASMAAGQSLGSIGTDTGGSIRQPASFC 184 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+++F SLDQAG +T +V DSA +L I+G+D D+T + PVP Sbjct: 185 GVVGMKPTYGRVSRYGLVAFGSSLDQAGPMTLSVPDSAAVLNVISGHDPLDSTSSSAPVP 244 Query: 252 DYERALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY AL+ + + G+ +G+P++Y + +SP +D ++ + +++AGA+ V + LPH Q+ Sbjct: 245 DYLDALEKRKDLHGLRIGLPRQYWEEKMSPEVDSACKKVLETIREAGARTVPVDLPHVQH 304 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 + AYYII+ AEASSNLARYDGVRYG R E +++L+MY TRS G+EV+ RIMIGTY Sbjct: 305 GVAAYYIIAMAEASSNLARYDGVRYGYRDQEARELLDMYRRTRSRALGEEVQRRIMIGTY 364 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ YD++Y +A +IR LI RDF +AFE D++ +P P++AF LG EN + Sbjct: 365 VLSAGYYDAYYKKAAQIRRLIHRDFMQAFED-CDLLCSPVVPSTAFRLG--ENVDDPLQM 421 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+FT ++N+AGLP IS+PA L E +P+G+Q +G F EE L I+E+ Sbjct: 422 YLTDIFTTSLNLAGLPGISIPAGLGHETGLPVGIQFMGPAFGEELLLQAAGILEQ 476 >gi|90962317|ref|YP_536233.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus salivarius UCC118] gi|122448660|sp|Q1WSH9|GATA_LACS1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|90821511|gb|ABE00150.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus salivarius UCC118] Length = 487 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/477 (44%), Positives = 311/477 (65%), Gaps = 11/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D L +K S EL S I+ + ++ A++++ ++A A + D+R + D+ L+ Sbjct: 12 HDDLVNKKYSVEELTKSTFDNIKKVDKEIEAFLKLDEERALEKARKIDERGVKADSI-LD 70 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GI IGIKD TK + T A S +L+ F P Y +TV KL D G + +GKLNMDEFAMGSS Sbjct: 71 GIGIGIKDNIVTKDLTTTAASKMLENFEPIYNATVMDKLNDAGMITVGKLNMDEFAMGSS 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + + W D+T PGGSSGGS+AAVA AS+G+DTGGSIRQPA+F G Sbjct: 131 TENSAFKITKNVW---DTTK--VPGGSSGGSAAAVASGQVLASLGSDTGGSIRQPAAFNG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A++L AI+G+D D T + VPD Sbjct: 186 IVGVKPTYGRVSRYGLIAFASSLDQIGPLTRTVKDNALVLNAISGHDAHDFTSSSREVPD 245 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + + ++ ++GM + +PKEY + + + K + + + GA + EISLPH++Y +P Sbjct: 246 FTKGIEDGVKGMRIAVPKEYFGEGVDEDVAKAVKDAVKTFESLGATVDEISLPHSKYGVP 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYII+ +EASSNL RYDG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS Sbjct: 306 VYYIIASSEASSNLQRYDGIRYGFRAKDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLS 365 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A ++RTLI +DF ++ D+IL PT+PT+A+ +G+E N+ +M N Sbjct: 366 AGSYDAFFKKAAQVRTLICQDFENVYKD-YDLILAPTSPTTAYGIGEEINDPVTM--YMN 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D+ T+ VN+AGLP +S+PA +P+GLQLI F E T++ G E+ + + Sbjct: 423 DILTIPVNLAGLPGMSLPAGFS-NGLPIGLQLIAPRFAESTMYRAGYAFEQSTDFHK 478 >gi|260219775|emb|CBA26644.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Curvibacter putative symbiont of Hydra magnipapillata] Length = 505 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 210/494 (42%), Positives = 311/494 (62%), Gaps = 23/494 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++V E + K +SA EL ++ +++ + A++++ A A A+ +D RI G Sbjct: 13 LSVQELVQAIADKQVSATELAQHFLDR-SQAHANLAAFVDLNADATLAQAKAADARIAAG 71 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A LEG+P+ KD F T+ T A S +L G+R +++TV KL + GA+ LGK+N DE Sbjct: 72 TAGALEGLPLAHKDIFVTRDFATTAGSRMLKGYRSPFDATVVSKLAEAGAITLGKVNCDE 131 Query: 127 FAMGSSNETS--------YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 FAMGSSNE + PV++PW + PGGSSGGS+A VA L A+ GT Sbjct: 132 FAMGSSNENTAVAAVGSDTVAPVLNPWDT-----SRIPGGSSGGSAAVVAARLAPAATGT 186 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+F G GIKPTYGR SR G+++FA SLDQAG + R+ D A+LL A+ G Sbjct: 187 DTGGSIRQPAAFCGITGIKPTYGRASRYGMVAFASSLDQAGPMARSAEDCALLLSAMCGP 246 Query: 239 D-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + D+T ++ P ++ R L+ SI+G+ +G+PKE+ D LS + + + GA Sbjct: 247 DPDRDSTSLDAPAENFTRKLNDSIEGLRIGVPKEFFGDGLSDDVRSAVDAALKQYEQLGA 306 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFG 356 K+V I+LP T+ ++P YYII+PAEASSNL+R+DGV++G R + D+ +MY+ TR+ GFG Sbjct: 307 KLVPIALPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRAKNYGDLADMYKKTRAEGFG 366 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIMIGTYVLS YD++YL+A+KIR +I DF AF++ DVI P PT A+ + Sbjct: 367 DEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIADDFQNAFKE-CDVIAGPVAPTVAWKI 425 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL----CEKKMPLGLQLIGQPFREET 472 G++ ++ + + D+FT++ ++AGLP +S+P +K +P+G+QL+G E Sbjct: 426 GEKSDD--PVANYLADIFTLSGSLAGLPGMSIPVGFAKSEADKGLPIGMQLLGNYLDEAR 483 Query: 473 LFSVGQIIEKEAGY 486 L + ++ Y Sbjct: 484 LLNAAHRFQQATDY 497 >gi|312194889|ref|YP_004014950.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Frankia sp. EuI1c] gi|311226225|gb|ADP79080.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Frankia sp. EuI1c] Length = 499 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 222/468 (47%), Positives = 309/468 (66%), Gaps = 16/468 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++SAVE + + I + ++A++ V + A A A D R G+ L G+P+ + Sbjct: 24 ELSAVEATQAALDRIAKVDDAVHAFLHVDVEGALATAAGVDTRRAAGEQLGPLAGVPLAL 83 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD KG T S IL+G+ P Y++TVT +L V+LGK NMDEFAMGSS E S Y Sbjct: 84 KDVLTAKGQPTTCGSRILEGWYPPYDATVTARLRAADVVILGKANMDEFAMGSSTENSAY 143 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW PGGSSGGSSAAVA F +IGTDTGGSIRQPA+ G VG+KP Sbjct: 144 GATRNPWDL-----SRIPGGSSGGSSAAVAAFEAPLAIGTDTGGSIRQPAAVCGLVGVKP 198 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERAL 257 TYG SR G+++F+ SLDQAG + RTV D+A+L AIAG+D CD+T V+ PVP E A+ Sbjct: 199 TYGGVSRYGLVAFSSSLDQAGPLARTVTDAALLHAAIAGHDPCDSTSVDRPVPPVVEAAV 258 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ +G+ +E D P + + + ++ L + GA+IVE+S PH YAL AYY+I Sbjct: 259 RREVRGLRIGVVRELSGDGYEPGVQARFDEAVALLAELGAEIVEVSCPHFDYALAAYYLI 318 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDIL----EMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +P+E SSNLAR+D +R+GLR+ G D L E+ TR+ GFG EVK RI++GTY LSS Sbjct: 319 APSECSSNLARFDAMRFGLRL-GDDGLAGAEEVMSRTRAAGFGPEVKRRIILGTYALSSG 377 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A+K+RTLI RDFT AFEQ VDV+++PTTPT AFP+G + ++ +M ND+ Sbjct: 378 YYDAYYGQAQKVRTLISRDFTAAFEQ-VDVLVSPTTPTVAFPIGAKVDDPIAM--YLNDL 434 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+ N+AG+PA+SVPA L + +P+G Q++ F +E L+ VG +E Sbjct: 435 CTIPANLAGVPAMSVPAGLSD-GLPVGFQIMAPAFADERLYEVGGALE 481 >gi|33861503|ref|NP_893064.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931391|sp|Q7V1D0|GATA_PROMP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33634080|emb|CAE19405.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 484 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 229/482 (47%), Positives = 312/482 (64%), Gaps = 13/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R + S + S ELV+ + I++ N ++NAY + + A + +E DK I N Sbjct: 1 MNFNSFRKEIYSGNASVKELVNEFFLKIDSLNPKINAYTCLTKKIANSQSENIDKLITNN 60 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIPI IKD TKG+ T S +L F YES+ + KLW G + LGK N+D Sbjct: 61 QKLPSLAGIPIAIKDNICTKGVVTSCSSKMLKDFVSPYESSASGKLWSLGGICLGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +G +PW PGGSSGGS+A+VA LC A+IG+DTGGSIR Sbjct: 121 EFAMGSSTETSVFGTTSNPWDV-----NRVPGGSSGGSAASVAAGLCLAAIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+I+FA SLDQ G IT TV D+A +L +I+G D D+TC Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLIAFASSLDQIGPITNTVSDAAEILYSISGKDNLDSTC 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGAKIVEIS 303 ++ PVP+Y LD+SI+G+ +GI +E D+ L P + ++ + + GA+I +I Sbjct: 236 LDKPVPNYLSDLDKSIKGIKIGIIEEC-FDHPGLDPEVKESVLSSVERFRSLGAEIHDIK 294 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHR 362 P + YY+I+P EAS+NLARYDGV+YG R EG+ ++LEM +R+ GFG EV+ R Sbjct: 295 CPRFNDGIATYYVIAPCEASANLARYDGVKYGYRSEGESNLLEMICKSRAEGFGDEVQRR 354 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTY LS+ D++Y +A+++RTLI+ DF AF + VDV+LTPT PT+AF G N+ Sbjct: 355 ILIGTYALSAGYSDAYYKKAQRVRTLIRSDFDNAFNE-VDVLLTPTCPTTAFLKGDFVND 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM +D+ TV VN+AGLPAIS+P +K +P+GLQLIG E + +V I EK Sbjct: 414 PLSM--YLSDLLTVPVNLAGLPAISIPCGFDKKGLPIGLQLIGNVLEEHRILNVANIFEK 471 Query: 483 EA 484 +A Sbjct: 472 DA 473 >gi|301299730|ref|ZP_07205980.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus salivarius ACS-116-V-Col5a] gi|300214968|gb|ADJ79384.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Lactobacillus salivarius CECT 5713] gi|300852661|gb|EFK80295.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus salivarius ACS-116-V-Col5a] Length = 487 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 212/477 (44%), Positives = 311/477 (65%), Gaps = 11/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D L +K S EL S I+ + ++ A++++ ++A A + D+R + D+ L+ Sbjct: 12 HDDLVNKKYSVEELTKSTFDNIKKVDKEIEAFLKLDEERALEKARKIDERGVKADSI-LD 70 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GI IGIKD TK + T A S +L+ F P Y +TV KL D G + +GKLNMDEFAMGSS Sbjct: 71 GIGIGIKDNIVTKDLTTTAASKMLENFEPIYNATVMDKLNDAGMITVGKLNMDEFAMGSS 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + + W D+T PGGSSGGS+AAVA AS+G+DTGGSIRQPA+F G Sbjct: 131 TENSAFKITKNVW---DTTK--VPGGSSGGSAAAVASGQVLASLGSDTGGSIRQPAAFNG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A++L AI+G+D D T + VPD Sbjct: 186 IVGVKPTYGRVSRYGLIAFASSLDQIGPLTRTVKDNALVLNAISGHDAHDFTSSSREVPD 245 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + + ++ ++GM + +PKEY + + + K + + + GA + E+SLPH++Y +P Sbjct: 246 FTKGIEDGVKGMRIAVPKEYFGEGVDEDVAKAVKDAVKTFESLGATVDEVSLPHSKYGVP 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYII+ +EASSNL RYDG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS Sbjct: 306 VYYIIASSEASSNLQRYDGIRYGFRAKDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLS 365 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A ++RTLI +DF + + D+IL PT+PT+A+ +G+E N+ +M N Sbjct: 366 AGSYDAFFKKAAQVRTLICQDFENVY-KNYDLILAPTSPTTAYGIGEEINDPVTM--YMN 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D+ T+ VN+AGLP +S+PA +P+GLQLI F E T++ G E+ + + Sbjct: 423 DILTIPVNLAGLPGMSLPAGFS-NGLPIGLQLIAPRFAESTMYRAGYAFEQSTDFHK 478 >gi|222153628|ref|YP_002562805.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus uberis 0140J] gi|254790406|sp|B9DVG6|GATA_STRU0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|222114441|emb|CAR43253.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus uberis 0140J] Length = 488 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + E L SK+ISA EL + + I+ + ++I + +KA + AE D R Sbjct: 3 LNHKTIDELHTLLLSKEISAKELTQATLDDIKAREDAVGSFITLAEEKALSQAEAIDARG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ + + GIP +KD +T+GI T A S +L + P + +T +K + +++GK N Sbjct: 63 IDPN-NVMSGIPFAVKDNISTEGILTTAASKMLYNYEPIFNATAIEKAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWDHSK-----VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL IAG D+ D+ Sbjct: 177 IRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAGSDDKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY A+ + I+GM + +PKEY + + P I + + + GA + E+S Sbjct: 237 TSAPVQIADYTSAIGKDIKGMKIALPKEYLGEGIDPKIKENILEAAKQFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K + E+Y NTRS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDAKTLEEIYVNTRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+I+ PT PT AF L ++ Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLIIGPTAPTVAFGLDTLNHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D+ T+ VN+AGLP IS+P+ + +P+GLQLIG + EE ++ E Sbjct: 416 PVSM--YLADLLTIPVNLAGLPGISIPSGFVD-GLPVGLQLIGPKYSEERIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|93005306|ref|YP_579743.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Psychrobacter cryohalolentis K5] gi|109891974|sp|Q1QDJ4|GATA_PSYCK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|92392984|gb|ABE74259.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Psychrobacter cryohalolentis K5] Length = 498 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 212/499 (42%), Positives = 313/499 (62%), Gaps = 18/499 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ ++ + L+ K S++EL D YI+ I +S++N++I ++ ARA A+ +D Sbjct: 1 MSELHLLSTQQLITGLQDKQFSSLELTDHYIKRINALDSKINSFITHTSETARAQAKAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + GD R L G+P+ KD F T+G+ T S +L F Y++T+ + G + LG Sbjct: 61 EMRVQGDKRPLLGVPMAHKDIFCTQGVLTTCGSKMLHNFISPYDATIVTNIDKAGMISLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SYYG V +PW SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYYGAVHNPWNIAHVPGG-----SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG + R+ D A LL+ + G+D Sbjct: 176 GGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGSMGRSAMDCAFLLQPMIGHDP 235 Query: 241 CDATCVNLPVPDYERAL--------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 DAT + +PDY + L D+ G+ +G+ KEY L +++ + + Sbjct: 236 RDATSIKYDMPDYVQDLNDAAASAGDKPFAGLRIGVAKEYFSKGLDTEVEQAARAALKKY 295 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTR 351 ++ GA IVE+++ + L YY+++PAEASSNL+R+DGVR+G R E KD++++Y +R Sbjct: 296 EELGATIVEVTITDPEITLATYYMLAPAEASSNLSRFDGVRFGYRCENPKDLIDLYTRSR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S GFG EV+ RI+ GTY LS+ +D++Y +A+K+R +I +DF +AF DVI +PT PT Sbjct: 356 SEGFGPEVQRRILSGTYALSAGYFDAYYTKAQKVRRIIIKDFEDAFAN-CDVIASPTAPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A+ LG E+ + +M DV+T+ VN+AGLPA+S P L +P+GLQLIGQ ++E Sbjct: 415 AAYKLG-EDLDPATM--YLGDVYTIGVNLAGLPALSQPVGLTSAGLPIGLQLIGQYWQES 471 Query: 472 TLFSVGQIIEKEAGYFRPH 490 L S + ++ + H Sbjct: 472 KLLSTAHLFQQHTDHHLQH 490 >gi|313632852|gb|EFR99803.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria seeligeri FSL N1-067] Length = 483 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/483 (45%), Positives = 306/483 (63%), Gaps = 11/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +V E D+L K+I+ +LV IE ++ ++I + + A AEE I+ Sbjct: 6 FSVKELHDKLVKKEITPFDLVTESFNRIEAVEDKVGSFITLNKETALGVAEELGDAGIDP 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDE Sbjct: 66 NNM-LAGMPIGIKDNIVTKNLRTTAASKILENFDPIYDATVVSKLKNAQTINIGKLNMDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQ Sbjct: 125 FAMGSSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQ 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T + Sbjct: 180 PAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSI 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N PV + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH Sbjct: 240 NQPVERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPH 299 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 ++Y + +YYI++ +EASSNL+R+DGVRYG R L E+Y+ TRS GFG EVK RIM+ Sbjct: 300 SEYGVASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYKKTRSEGFGDEVKRRIML 359 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A++ RTLIK+DF FE DV + P++PT+AF + N+ + Sbjct: 360 GTYALSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVXIGPSSPTTAFKIDGMINDPIT 418 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M ND+ TV +N++G+PAISVP + +P+GLQ+IG F E L+ V E+ Sbjct: 419 M--YSNDILTVPINLSGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQATT 475 Query: 486 YFR 488 + + Sbjct: 476 FHK 478 >gi|71065051|ref|YP_263778.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Psychrobacter arcticus 273-4] gi|109891973|sp|Q4FUG4|GATA_PSYA2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|71038036|gb|AAZ18344.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Psychrobacter arcticus 273-4] Length = 498 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 212/499 (42%), Positives = 313/499 (62%), Gaps = 18/499 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ ++ + L+ K S++EL D YI+ I +S++N++I ++ AR A+ +D Sbjct: 1 MSELHLLSTQQLITGLQDKQFSSLELTDHYIKRINALDSKINSFITHTSETARTQAKAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + GD R L G+P+ KD F T+G+ T S +L F Y++T+ + G + LG Sbjct: 61 EMRVQGDKRPLLGVPMAHKDIFCTQGVLTTCGSKMLHNFISPYDATIVTNIDKAGMISLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SYYG V +PW SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYYGAVHNPWNIGHVPGG-----SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG + R+ D A LL+ + G+D Sbjct: 176 GGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGSMGRSAMDCAYLLQPMIGHDP 235 Query: 241 CDATCVNLPVPDYERAL--------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 DAT + +PDY + L D+ G+ +G+ KEY L +++ + + Sbjct: 236 RDATSIKYDMPDYVQDLNDAAASAGDKPFAGLRIGVAKEYFSKGLDTEVEQAARAALKKY 295 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTR 351 ++ GA IVE+++ + L YY+++PAEASSNL+R+DGVR+G R E KD++++Y +R Sbjct: 296 EELGATIVEVTITDPEITLATYYMLAPAEASSNLSRFDGVRFGYRCENPKDLIDLYTRSR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S GFG EV+ RI+ GTY LS+ +D++Y++A+K+R LI +DF +AF DVI +PT PT Sbjct: 356 SEGFGPEVQRRILSGTYALSAGYFDAYYIKAQKVRRLIVKDFEDAFAN-CDVIASPTAPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A+ LG E+ + +M DV+T+ VN+AGLPA+S P L +P+GLQLIGQ ++E Sbjct: 415 AAYKLG-EDLDPATM--YLGDVYTIGVNLAGLPALSQPVGLTSAGLPIGLQLIGQYWQES 471 Query: 472 TLFSVGQIIEKEAGYFRPH 490 L S + ++ + H Sbjct: 472 KLLSTAHLFQQHTDHHLQH 490 >gi|269123152|ref|YP_003305729.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptobacillus moniliformis DSM 12112] gi|268314478|gb|ACZ00852.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptobacillus moniliformis DSM 12112] Length = 479 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/485 (45%), Positives = 313/485 (64%), Gaps = 13/485 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ + +E + ++ K IS+ + S + I+ ++ A+ V + A AA+++D Sbjct: 1 MNKIYTLTATEIANLIKDKKISSEDATRSILNRIDEMEDKIGAFASVNKENAMEAAKKAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + I L G+PI +KD + G T + S IL G+ Y++TV ++L + V++G Sbjct: 61 ETEITSL---LHGVPIALKDNIVSLGELTTSASKILSGYYGTYDATVVKRLKEADVVLVG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSSNE S V +PW + PGGSSGGS+AAVA ++GTDT Sbjct: 118 KANMDEFAMGSSNENSSIKVVSNPWDL-----ERVPGGSSGGSAAAVASLEVPIALGTDT 172 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPA+ TGTVG+KPTYGR SR G+++F SLDQ GII RT D A L+ IAG D Sbjct: 173 GGSVRQPAALTGTVGLKPTYGRVSRYGLMAFGSSLDQVGIIARTSEDVAKTLEIIAGEDI 232 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T ++ VP Y LD+ I G+ +GI K++ + LS I ++ + + L GA IV Sbjct: 233 YDPTTSDVEVPKYSELLDKDINGLKIGIDKKF-FEGLSNEIKESIENALDTLVKMGAVIV 291 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +ISL + +Y++P YYIIS AEASSNL+RYDG+RYG R E ++ ++Y +R+ GFG+EVK Sbjct: 292 DISLDYAKYSIPTYYIISSAEASSNLSRYDGIRYGHRAEADNVEDVYIKSRTEGFGKEVK 351 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIG+YVLSS YD++Y +A ++R LIK D+ +AFE VDVI+TPTTP AF G++ Sbjct: 352 RRIMIGSYVLSSGFYDAYYKKASQVRRLIKNDYQKAFEN-VDVIITPTTPNVAFKKGEKS 410 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 NN M +D++TV+V++AGLPAISVP K+P+G+Q+I FRE+ L +V Sbjct: 411 NNPIEM--YLSDIYTVSVSLAGLPAISVPVGFV-NKLPVGMQIISNYFREDLLLNVTHKY 467 Query: 481 EKEAG 485 E E G Sbjct: 468 EMERG 472 >gi|297570605|ref|YP_003691949.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfurivibrio alkaliphilus AHT2] gi|296926520|gb|ADH87330.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfurivibrio alkaliphilus AHT2] Length = 484 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/468 (45%), Positives = 302/468 (64%), Gaps = 10/468 (2%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 + +S+ E ++ + IE + Q+NAYI V + A A AE +D+R+ G+A L G+PI + Sbjct: 18 RKLSSREATEAVLARIEATGEQVNAYITVDREGALADAEAADRRLAAGEAPTLCGVPIAV 77 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD TKG+ T S IL+ F P Y +T +KL + GAV++GK +DEFAMGSSNE Sbjct: 78 KDLLCTKGLRTTGGSKILENFVPPYSATAVEKLREAGAVLVGKTTLDEFAMGSSNEHCPL 137 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 +PW + D G S G ++A A C ++GTDTGGSIRQPAS G VG+KP Sbjct: 138 AVPHNPW----NLDHICGGSSGGSAAAVAAD-QCMGALGTDTGGSIRQPASHCGVVGVKP 192 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGR SR G+++FA SLDQ G +T+ VRD+A+LL AI G+D D+T V PV D+ L Sbjct: 193 TYGRVSRYGVLAFASSLDQVGPLTKDVRDAALLLNAICGHDPRDSTSVREPVADFSAELG 252 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + G+ G+P+EY L + K ++ L++AGA+I EISLP T+Y + AYY+I+ Sbjct: 253 RPLAGLRFGLPREYFEVGLDEDVKKAVMTAVNRLQEAGAEIREISLPRTEYGVAAYYLIA 312 Query: 319 PAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 PAEASSNL+RYDGVRYG R E +++L++Y +RS GFG+EVK RI+IGTY LSS Y++ Sbjct: 313 PAEASSNLSRYDGVRYGYRDQEARELLDLYRRSRSRGFGREVKRRIIIGTYALSSGYYEA 372 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +Y +A ++R LI DF AFE+ D+I++P TPT A+PLG + S + D+ T+ Sbjct: 373 YYGKASQVRALIIDDFRRAFEE-CDLIISPVTPTPAWPLG---DKSDPLSMYLTDILTIP 428 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+AGLP +S+P K +P+GLQL FRE+ L IE++ G Sbjct: 429 TNLAGLPGMSLPCGFSSKGLPIGLQLQAPHFREDLLLRAAAAIEEQQG 476 >gi|116070440|ref|ZP_01467709.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. BL107] gi|116065845|gb|EAU71602.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. BL107] Length = 491 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/489 (46%), Positives = 321/489 (65%), Gaps = 13/489 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +S R +L++ DIS+ ELVD +I ++++ ++ Y E+ ++ARA A+ D G Sbjct: 6 MTISAWRQQLQNGDISSRELVDQHIDRLKSAEPALSVYNEITVERARADADRIDAARAAG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++ L G+P+ IKD T+G+ T S +L+ F P YEST T++LW G V++GK N+D Sbjct: 66 ESLGPLAGLPLAIKDNLCTRGVRTTCSSRMLEHFVPPYESTATERLWQAGGVLVGKTNLD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETS +G +PW ++D PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 126 EFAMGGSTETSAFGATHNPW-NLD----HVPGGSSGGSAAAVASGSCIASLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR G+++FA SLDQ G TV D+A LL+ IAG D D+TC Sbjct: 181 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFATTVADAAELLQVIAGPDPRDSTC 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N+ VPDY L+QSI+G+ VG+ KE + L + + Q + L+ GA++VE+S Sbjct: 241 LNVDVPDYSAGLNQSIKGLKVGVIKECFDAKGLDGEVKASVQAAAAQLEALGAELVEVSC 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRI 363 P + YY+I+P+EAS+NLARYDGV+YG R + + + M ++R+ GFG+EV+ RI Sbjct: 301 PRFNDGIATYYVIAPSEASANLARYDGVKYGFRAADAESLATMTSSSRAEGFGEEVQRRI 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +IGTY LS+ D++Y +A+++RTLI+RDF AF Q VDV+LTPT P++AF G +++ Sbjct: 361 LIGTYALSAGYVDAYYKKAQQVRTLIRRDFDAAF-QSVDVLLTPTAPSTAFKAGAHKDDP 419 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D+ T+ VN+AGLPAISVP + +P+G+QLIG E L V E+ Sbjct: 420 LAM--YLADLLTIPVNLAGLPAISVPCGFSQAGLPIGVQLIGNVLDEARLLQVAHQYEQA 477 Query: 484 AGYF--RPH 490 A RP Sbjct: 478 ADVLSQRPQ 486 >gi|330685573|gb|EGG97219.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Staphylococcus epidermidis VCU121] Length = 485 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/484 (44%), Positives = 313/484 (64%), Gaps = 22/484 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD----- 70 +++K+I ++V AIE ++ + +++ + + A A+E D+ A+D Sbjct: 15 IKNKEIKPSQIVSDIYDAIEETDPTIKSFLALDKENAMKKAQELDEL----QAKDQMEGK 70 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+GIKD TK + T S +L+GF P YESTV KL + AV++GKLNMDEFAMG Sbjct: 71 LFGIPMGIKDNIITKDLETTCASKMLEGFVPIYESTVMNKLHNENAVLIGKLNMDEFAMG 130 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ETSY+ ++P+ SSGGS+AAVA L S+G+DTGGSIRQPAS+ Sbjct: 131 GSTETSYFKKTVNPFDHSAVPGG-----SSGGSAAAVAAGLVPFSLGSDTGGSIRQPASY 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+++FA SLDQ G +TR V+D+A++L+AI+G D D+T + Sbjct: 186 CGIVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNALVLEAISGLDANDSTSAPVDD 245 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D+ + + I+G+ V +PKEY + +S + + + + LK GA++ E+SLP+T+Y Sbjct: 246 VDFTSEIGKDIKGLKVALPKEYLGEGVSEDVKASVKNAVETLKSLGAEVEEVSLPNTKYG 305 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P+YY+I+ +EAS+NLAR+DG+RYG E + + E+Y+ +RS GFG EVK RI +GT+ Sbjct: 306 IPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGDEVKRRIFLGTFA 365 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD+ Y +++K+RTLIK DF + FE+ D+++ PT PT+AF LG E ++ +M Sbjct: 366 LSSGYYDAFYKKSQKVRTLIKNDFDKIFEK-YDIVVGPTAPTTAFDLGDEIDDPLTM--Y 422 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 ND+ T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V E + F Sbjct: 423 ANDLLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRVAYQYETQ---FNL 478 Query: 490 HKWW 493 H + Sbjct: 479 HDAY 482 >gi|184155948|ref|YP_001844288.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus fermentum IFO 3956] gi|229485889|sp|B2GDS6|GATA_LACF3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|183227292|dbj|BAG27808.1| glutamyl-tRNA amidotransferase subunit A [Lactobacillus fermentum IFO 3956] Length = 487 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/477 (45%), Positives = 314/477 (65%), Gaps = 14/477 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K +SA EL + I+ ++ Q+ A++ + + A A E D+ I D L GIP Sbjct: 15 LVAKKVSATELTKAAFDRIKATDDQVGAFLALNEEAALKQAAELDQAGIAEDQL-LAGIP 73 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD TKG+ T A S IL+ F+P Y++TV +KL G + +GK+N+DEFAMGSS E Sbjct: 74 LAVKDNIVTKGLTTTAASKILENFKPVYDATVVEKLNAAGVINVGKVNLDEFAMGSSTEN 133 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIR PASFTGTVG Sbjct: 134 SAFKTTKNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGSDTGGSIRIPASFTGTVG 188 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+F S DQ G +T++V+D+AIL+ AIAG D+ D T N PVPD+ Sbjct: 189 MKPTYGRVSRWGLIAFGSSFDQIGWLTQSVKDNAILMSAIAGKDDRDMTSANQPVPDFAA 248 Query: 256 AL-DQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L DQ+ I+GM + +P+EY ++ L + + + + L+ GA I E+SLPHT+Y +PA Sbjct: 249 GLNDQADIKGMKIAVPREY-MEGLDDDVQEVIEASLKHLESLGATIDEVSLPHTKYGVPA 307 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYI++ +EASSNL R+DG+RYG R + K++ ++Y TRS GFG EVK RIM+GT+ LS+ Sbjct: 308 YYILASSEASSNLQRFDGIRYGFRADDVKNLEDVYVKTRSQGFGDEVKLRIMLGTFSLSA 367 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++ +A K+R LI +DF + + D+I+ PT ++AF +G E + M +ND Sbjct: 368 GFYDAYFNKAAKVRRLIAQDFDDVLKDH-DLIVGPTGTSTAFKIGAEIADPKQM--YFND 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 V TV +NMAGLP +S+PA + MP+GLQ+IG+ F E T++ G + E+ + + Sbjct: 425 VLTVTLNMAGLPGMSIPAGFSKDNGMPIGLQMIGKRFDEATIYKAGYVFEQTTDFHK 481 >gi|291531793|emb|CBK97378.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Eubacterium siraeum 70/3] gi|291556673|emb|CBL33790.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Eubacterium siraeum V10Sc8a] Length = 482 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 288/480 (60%), Gaps = 8/480 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + R+ L +K ISA EL Y +I+ +S + YI V +A AE++ + Sbjct: 2 ELKKQTLGSLREMLDTKQISAAELCKEYSDSIKAKDSDVLGYITVTEDEALKNAEKAQEI 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+A+ L GIP+ IKD T GI T S +L+ F P Y++ V +KL V+LGK Sbjct: 62 IDKGEAKALTGIPLAIKDNICTDGIRTTCASKMLENFVPPYDANVIEKLKAENYVLLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +MDEFAMG S +TS + +P+ PGGSSGGS+A V+ L A++G+DTGG Sbjct: 122 SMDEFAMGGSTQTSAFAKTRNPFDL-----SRVPGGSSGGSAAVVSAGLAPAALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G G+KPTYGR SR G+++FA SLDQ G I + D +L I G D D Sbjct: 177 SIRQPASFCGVTGLKPTYGRVSRYGLVAFASSLDQIGPIANSAVDCGTILNVICGKDSRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 AT N P D+ + + I+GM + +PKE+ D + ++ GA +V+ Sbjct: 237 ATSANKPAEDFNAKVGKDIKGMKIALPKEFFADSTDDEVKNAVLAAAKKYEEMGATLVDC 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 S+ +YA+ AYY+++ AEA+SNL+R+DG++YGLR EG+ EM ++R+ GFG EVK R Sbjct: 297 SMKSLKYAVSAYYLVASAEAASNLSRFDGIKYGLRGEGRTFDEMIRDSRTRGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++G Y LSS YD++YL+A ++ I +++ E FE DVILTPT PT A+ +G++E + Sbjct: 357 ILLGNYALSSGYYDAYYLKALALKQQIIKEYNEIFENA-DVILTPTAPTVAYKIGEQETD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D+ TV VN+A LPAISVP MP+G+ L+G+ + E TL EK Sbjct: 416 PVKM--YLADICTVTVNIASLPAISVPCGYNADGMPIGMSLVGRKWDEATLIQTADAFEK 473 >gi|238019228|ref|ZP_04599654.1| hypothetical protein VEIDISOL_01092 [Veillonella dispar ATCC 17748] gi|237863927|gb|EEP65217.1| hypothetical protein VEIDISOL_01092 [Veillonella dispar ATCC 17748] Length = 486 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 303/475 (63%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I ++AY+ +A A A+ D+ I G+A Sbjct: 4 IHELHKKLVNKEISAVELTNAVIAHKAKVEPTVHAYLSDSHDRALATAKLVDEAIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V + L DN + LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDEPATCASKMLENFVPPYNASVIECLQDNHYISLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW + PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTTNPWNA-----DCVPGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AI+G+D D+T + Sbjct: 179 ASFCGVVGLKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAISGHDAKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY AL ++ M +G+PKE+ D L+ + K ++ I K GA+IVE+SLP++ Sbjct: 239 GARVDYTTALVNDVKNMKIGVPKEFFGDGLNSEVRKAIEEAIETYKKLGAEIVEVSLPNS 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YG+RV ++++M TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGMRVPADNLVDMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R LIK +F EAF + VD+ILTPT P +++ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRLIKNEFDEAFSK-VDLILTPTAPNTSYKFGEKANDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSSNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|139473213|ref|YP_001127928.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes str. Manfredo] gi|166217720|sp|A2RCV7|GATA_STRPG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|134271459|emb|CAM29680.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes str. Manfredo] Length = 488 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLHNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|330958034|gb|EGH58294.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. maculicola str. ES4326] Length = 483 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/476 (45%), Positives = 309/476 (64%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q+N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLADKKFSSEELTRVLLSRIAQLDPQLNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLATAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+S Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAVVKEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 296 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK D AF VDVIL PTTP A+ +G + ++ Sbjct: 356 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDLMSAFAD-VDVILGPTTPNPAWKIGAKTHD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA +P+G+QL+ F+E L +V Sbjct: 415 --PIAEYLEDFYTITANLAGLPGLSMPAGFV-GGLPVGVQLLAPYFQEGRLLNVAH 467 >gi|320159727|ref|YP_004172951.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Anaerolinea thermophila UNI-1] gi|319993580|dbj|BAJ62351.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Anaerolinea thermophila UNI-1] Length = 496 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 206/491 (41%), Positives = 303/491 (61%), Gaps = 17/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + ++VSE +R D SAVE+ ++++ IE ++ I + A AE++D Sbjct: 1 MSRIPDLSVSELLAGMRRGDFSAVEVTRAFLEVIERLEPSLHTLITFTPELALRMAEDAD 60 Query: 61 KRIINGDARD---------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 +R D L GIP+ +KD KG+ S IL F P Y +T Q+L Sbjct: 61 RRYRAWRRADSPAEEALPPLLGIPLMVKDVLCLKGVPCTCGSRILQDFIPPYTATAVQRL 120 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 D G V+LGK N DEFAMGSS E S +G +PW PGGSSGGS++AVA + Sbjct: 121 LDAGVVVLGKTNTDEFAMGSSTENSAFGATRNPW-----NPAHVPGGSSGGSASAVAARM 175 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 A++G+DTGGSIRQPA++ G GIKPTYGR SR G++++ SLD G+ R+ ++A+ Sbjct: 176 TPAALGSDTGGSIRQPAAYCGVTGIKPTYGRVSRYGLVAYGSSLDTVGVFARSAAETALF 235 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +AG+D D+T V + +++G+ +G+P+EY + +S +++ + I+ Sbjct: 236 FSLMAGHDPLDSTSAREAVSPITLPDEPALKGLRIGVPQEYFIPGMSAEVEQAVRAAIAQ 295 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L+ GA + + LPHT+YALP YY+I+PAEAS+NLARYDGVR+GLR + + EM++ TR Sbjct: 296 LEHLGATVQMVRLPHTEYALPVYYLIAPAEASANLARYDGVRFGLRAPAERLWEMFDRTR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RIM+GTY LS+ YD++Y +A+K+RTLI++DF +AF+Q VDVI P PT Sbjct: 356 GSGFGAEVKRRIMLGTYALSAGYYDAYYAQAQKVRTLIRQDFLDAFQQ-VDVIACPVAPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 AF LG+ ++ +M D+FT+ N+AG+P ++ PA +P+G+QL+ PFREE Sbjct: 415 PAFRLGEHTDDPLAM--YLEDIFTLPANLAGVPGLAFPAGFSAAGLPIGIQLMSAPFREE 472 Query: 472 TLFSVGQIIEK 482 LF ++ Sbjct: 473 ILFQTAHAYQQ 483 >gi|306826771|ref|ZP_07460073.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus pyogenes ATCC 10782] gi|304431060|gb|EFM34067.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus pyogenes ATCC 10782] Length = 488 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALRQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLSNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|294793795|ref|ZP_06758932.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Veillonella sp. 3_1_44] gi|294455365|gb|EFG23737.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Veillonella sp. 3_1_44] Length = 486 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/475 (45%), Positives = 304/475 (64%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I ++AY+ +A A A+ D+ I GDA Sbjct: 4 IHELHKKLVNKEISAVELTNAVIAHKAKVEPTVHAYLSDSHDRALATAKLVDEAIAKGDA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V ++L DN + LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDEPATCASKMLENFVPPYNASVIERLQDNHYISLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW + PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTSNPWNA-----DCVPGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AI+G+D D+T + Sbjct: 179 ASFCGVVGLKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAISGHDAKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY AL ++ + +G+PKE+ + L+ + K ++ I K GA+IVE+SLP++ Sbjct: 239 GTRVDYTTALVNDVKNLKIGVPKEFFGEGLNSEVRKAVEEAIETYKKLGAEIVEVSLPNS 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YG+RV ++++M TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGMRVPADNLVDMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R LIK +F EAF + VD+ILTPT P +++ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRLIKNEFDEAFSK-VDLILTPTAPNTSYKFGEKANDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSNNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|255524358|ref|ZP_05391315.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium carboxidivorans P7] gi|296187483|ref|ZP_06855878.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium carboxidivorans P7] gi|255511915|gb|EET88198.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium carboxidivorans P7] gi|296048005|gb|EFG87444.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium carboxidivorans P7] Length = 486 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 206/484 (42%), Positives = 303/484 (62%), Gaps = 11/484 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ M E + + ++ E+V + I+ + ++ AYI + ++A +A+ D++ Sbjct: 2 EIQAMTAFEIKKGIEEGKFTSEEIVKKLFERIKEVDPKVEAYITLCEEEAIKSAKVVDEK 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + NG+ G+PI IKD T GI T S +L F P Y++TV +KL AV++GK Sbjct: 62 VKNGEKLGKFAGVPIAIKDNICTDGIKTTCASKMLGDFIPPYDATVIKKLKAEDAVIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW K PGGSSGGS+A VA + S+G+DTG Sbjct: 122 TNMDEFAMGSSTENSAFMKTKNPWDF-----KRVPGGSSGGSAAVVAAGIAPVSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG+KPTYG SR G+++FA SLDQ G +TV D A+ L+ I+GYD+ Sbjct: 177 GSIRQPAAFCGVVGLKPTYGLISRFGLVAFASSLDQIGPFGKTVEDCAMTLEVISGYDKM 236 Query: 242 DATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V DY ALD S++G+ +G+PKE+ L+ I + ++ + LK+ GA + Sbjct: 237 DSTSSRKEVETDYLSALDGSVKGLKIGVPKEFFGKGLNEEIKASLEKVMGKLKEMGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E ++P T+ L +YYIIS AEASSNL RYDG+RYG R + + + ++ TR+ GFG+EV Sbjct: 297 ETTMPITEEGLSSYYIISSAEASSNLDRYDGIRYGYRAKDYESVDDLMAQTRTEGFGKEV 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTY LSS YD++Y RA+K+R I+R F E E+ D+IL+PT+P F G++ Sbjct: 357 KRRIMLGTYALSSGYYDAYYNRAQKLRKEIRRQFKETLEK-YDLILSPTSPVLPFLSGEK 415 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N M D++TV +N+AG+PA+S+P ++ +P+G+Q+IG F E+ + Sbjct: 416 SEN--PMEMYLADIYTVNINLAGVPALSLPCGFSKEGLPIGIQIIGPHFGEKKILKAAYA 473 Query: 480 IEKE 483 +EKE Sbjct: 474 LEKE 477 >gi|251783229|ref|YP_002997534.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391861|dbj|BAH82320.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 488 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 295/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F+G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFSGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|167751117|ref|ZP_02423244.1| hypothetical protein EUBSIR_02102 [Eubacterium siraeum DSM 15702] gi|167655832|gb|EDR99961.1| hypothetical protein EUBSIR_02102 [Eubacterium siraeum DSM 15702] Length = 482 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 287/480 (59%), Gaps = 8/480 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + R+ L +K ISA EL Y +I+ +S + YI V +A AE++ + Sbjct: 2 ELKKQTLGSLREMLDTKQISAAELCKEYSDSIKAKDSDVLGYITVTEDEALKNAEKAQEI 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+A+ L GIP+ IKD T GI T S +L+ F P Y++ V +KL V+LGK Sbjct: 62 IDKGEAKALTGIPLAIKDNICTDGIRTTCASKMLENFVPPYDANVIEKLKAENYVLLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +MDEFAMG S +TS + +P+ PGGSSGGS+A V+ L A++G+DTGG Sbjct: 122 SMDEFAMGGSTQTSAFAKTRNPFDL-----SRVPGGSSGGSAAVVSAGLAPAALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G G+KPTYGR SR G+++FA SLDQ G I D +L I G D D Sbjct: 177 SIRQPASFCGVTGLKPTYGRVSRYGLVAFASSLDQIGPIANNAVDCGTILNVICGKDSRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 AT N P D+ + + I+GM + +PKE+ D + ++ GA +V+ Sbjct: 237 ATSANKPAEDFNAKVGKDIKGMKIALPKEFFADSTDDEVKNAVLAAAKKYEEMGATLVDC 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 S+ +YA+ AYY+++ AEA+SNL+R+DG++YGLR EG+ EM ++R+ GFG EVK R Sbjct: 297 SMKSLKYAVSAYYLVASAEAASNLSRFDGIKYGLRGEGRTFDEMIRDSRTRGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++G Y LSS YD++YL+A ++ I +++ E FE DVILTPT PT A+ +G++E + Sbjct: 357 ILLGNYALSSGYYDAYYLKALALKQQIIKEYNEIFENA-DVILTPTAPTVAYKIGEQETD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D+ TV VN+A LPAISVP MP+G+ L+G+ + E TL EK Sbjct: 416 PVKM--YLADICTVTVNIASLPAISVPCGYNADGMPIGMSLVGRKWDEATLIQTADAFEK 473 >gi|154483459|ref|ZP_02025907.1| hypothetical protein EUBVEN_01162 [Eubacterium ventriosum ATCC 27560] gi|149735711|gb|EDM51597.1| hypothetical protein EUBVEN_01162 [Eubacterium ventriosum ATCC 27560] Length = 491 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 209/491 (42%), Positives = 302/491 (61%), Gaps = 14/491 (2%) Query: 4 LNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVA-QKARAAAEESD 60 +N M+++ E +++S ++ V+ V++ IE +N+Y+ V ++ AE Sbjct: 1 MNLMSLTAVELGKKIKSGEVRVVDAVNAAFDQIEAVEKDINSYVTVYKKEEVLEKAEHIQ 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I G L G+P+ IKD T+ T S IL F P Y + L GAV++ Sbjct: 61 KLIDEGQLTGPLAGVPVAIKDNMCTRDKLTTCSSKILGNFYPTYSAEAVINLEKAGAVII 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS+YGP +PW + PGGSSGGS AAVA C+ ++G+D Sbjct: 121 GKTNMDEFAMGSTTETSFYGPTKNPWNK-----EHVPGGSSGGSCAAVAAEECSYALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G + + V D +L+ IA YD Sbjct: 176 TGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCTTILETIASYD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V ++ AL + ++G+ +GIPK+Y + L P + + + + LKD GA + Sbjct: 236 SKDSTSVKRDDYNFTEALVEDVKGLKIGIPKDYFGEGLEPEVKEAILKAVDVLKDKGAIV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E L +YA+PAYY+I+ AEASSNL+R+DGV+YG R E + L MY+ TRS GFG+E Sbjct: 296 EEFDLSLVEYAIPAYYVIASAEASSNLSRFDGVKYGYRTEEYNGLHNMYKKTRSEGFGEE 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK+ F EAF + DVI+ P PT+A LG Sbjct: 356 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKKAFDEAFAK-YDVIIGPAAPTTAPKLG- 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ S + D++T++VN+AGLP ISVP +P+G+Q+IG F+E+ + Sbjct: 414 -DSLSDPIKMYLGDIYTISVNLAGLPGISVPCGQDSNGLPIGMQIIGDCFKEKNIIRAAY 472 Query: 479 IIEK-EAGYFR 488 E+ + GY R Sbjct: 473 TFEQAKNGYDR 483 >gi|160878796|ref|YP_001557764.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium phytofermentans ISDg] gi|189045244|sp|A9KJ26|GATA_CLOPH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|160427462|gb|ABX41025.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium phytofermentans ISDg] Length = 494 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 224/498 (44%), Positives = 308/498 (61%), Gaps = 18/498 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + E +++ K++S E V + AI+ ++YI V ++A A + Sbjct: 2 EITKLTAIELSKKIKQKELSVEEAVKATFSAIKKREPYYHSYITVNEEEALEQASKIQIA 61 Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G D L G+PI IKD KG+ T S IL+ F P Y ++V ++L D GA++LG Sbjct: 62 IEAGKFADSPLAGVPIAIKDNICVKGMRTTCASKILEDFIPPYNASVIERLKDAGAIILG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+ ETSY+G +PW + PGGSSGGS+AAVA ++GTDT Sbjct: 122 KTNMDEFAMGSTTETSYFGATKNPWNI-----ECIPGGSSGGSAAAVAAEEAFIALGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP++F G GIKPTYG SR G++++A SLDQ G I R+V D A L+ I+G D+ Sbjct: 177 GGSIRQPSAFCGVTGIKPTYGTVSRYGLVAYASSLDQIGPIARSVSDCAATLQVISGADD 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+TCV DY AL ++G+ +GIP+ Y + L + K + ++ K+ GA + Sbjct: 237 KDSTCVKAASYDYVSALRSDVRGLRIGIPRGYFSEGLDAEVKKHVLEAAAFFKEQGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEV 359 E L YA PAYY+I+ AEASSNL+RYDGV+YG R D L E+Y+ TRS GFG+EV Sbjct: 297 EFDLEAVDYATPAYYVIASAEASSNLSRYDGVKYGYRTADFDGLQELYKKTRSEGFGEEV 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K R+MIG++VLSS YD++Y +A K+R LIK+ F AFE+ D+IL PTTP +A LG+ Sbjct: 357 KRRMMIGSFVLSSGYYDAYYNKALKVRALIKQSFDRAFER-FDIILGPTTPAAARKLGQS 415 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-------MPLGLQLIGQPFREET 472 N M D++TV+VN+AGLPAIS+P L E+ MP+GLQLIG+PF E+ Sbjct: 416 LFNPVKM--FLGDIYTVSVNLAGLPAISLPCGLSEESSSDKSAGMPIGLQLIGKPFGEKD 473 Query: 473 LFSVGQIIEKEAGYFRPH 490 + +E+ Y RP Sbjct: 474 IIRAAYTLEQTKIYQRPK 491 >gi|104780288|ref|YP_606786.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas entomophila L48] gi|166217701|sp|Q1IED3|GATA_PSEE4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|95109275|emb|CAK13972.1| glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pseudomonas entomophila L48] Length = 483 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/476 (45%), Positives = 310/476 (65%), Gaps = 10/476 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E L K S+ EL + + I+ + Q+N++I V ++A A +D R Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLSRIKQLDPQLNSFITVTEEQALHQARAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G PI KD F T+G+ T S +LD F Y++TV KL + G V LGK N Sbjct: 61 AAGETGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFTAPYDATVVAKLAEAGMVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----EHVPGGSSGGSAAAVAARLLPATTGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDSKDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V PVP++ L+ S+QG+ +G+PKEY L P I + Q + L+ GA + EIS Sbjct: 236 TSVEEPVPNFSADLNASLQGLRIGLPKEYFGAGLDPRIAERVQASVKELEKLGAVVKEIS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+ AYY+I+PAEASSNL+R+DGVR+G R + KD+ ++Y+ +R GFG EV+ R Sbjct: 296 LPNMQHAIAAYYVIAPAEASSNLSRFDGVRFGHRCADPKDLTDLYKRSRGEGFGVEVQRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ YD++Y++A++IR LIK DF AF VDVI+ PTTP A+ +G + + Sbjct: 356 IMVGTYALSAGYYDAYYVKAQQIRRLIKNDFVAAFND-VDVIIGPTTPNPAWKIGAKAGD 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L ++ Sbjct: 415 --PIAEYLEDLYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNIAH 467 >gi|302558230|ref|ZP_07310572.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces griseoflavus Tu4000] gi|302475848|gb|EFL38941.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces griseoflavus Tu4000] Length = 498 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/482 (45%), Positives = 320/482 (66%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E+ ++ S +++AVE+ ++++ IE + +++A++ V + A A A D++ G Sbjct: 8 LTAAETAAKIASGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRARG 67 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD F T+GI T S IL+G+ P Y++T+T++L V+LGK NMD Sbjct: 68 EKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATLTKRLKAADVVILGKTNMD 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTDTGGSIR Sbjct: 128 EFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFQAPLAIGTDTGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T Sbjct: 183 QPAAVTGTVGVKPTYGSVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPMDSTS 242 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S+ GM VG+ K++R + + + + + ++ LK+ GA+I+E+ Sbjct: 243 IDAPVPAVVEAARNGSVTGMRVGVVKQFRGEGYQSGVIQRFDESVALLKELGAEIIELDC 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVK 360 P AL AYY+I+P+E SSNLAR+DG+RYGLR G D E+ TR GFG EVK Sbjct: 303 PSFDLALSAYYLIAPSECSSNLARFDGLRYGLRT-GDDGSHSAEEVTSLTREAGFGPEVK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y A+K+RTLIK++F AFEQ VDVI++PTTPT+AFP+G+ Sbjct: 362 RRIMLGTYALSSGYYDAYYGSAQKVRTLIKQEFERAFEQ-VDVIVSPTTPTTAFPIGERA 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 421 DD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPAMKDDRLYKVGAA 478 Query: 480 IE 481 +E Sbjct: 479 VE 480 >gi|300088139|ref|YP_003758661.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527872|gb|ADJ26340.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 487 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 205/477 (42%), Positives = 301/477 (63%), Gaps = 10/477 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E+ LR K++SAVEL +Y+ IE Q+ A + V + A A+ +D+ I G Sbjct: 8 LTIVEAGKMLREKEVSAVELTRAYLDRIEAVEPQVQALMTVCRETALEQAKSADEAIAVG 67 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P+ +KD +TKGI T S +L+ + P Y++ V ++L GAV++ K NMDE Sbjct: 68 QGSILTGVPVILKDVISTKGIRTTCSSRMLENYVPPYDAGVVEQLKAQGAVIIAKANMDE 127 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + G ++ ++ L G+DTGGSIRQ Sbjct: 128 FAMGSSTENSAFFTTHNPWDLERVPGGSSGGSAAAVAAGEAPAAL-----GSDTGGSIRQ 182 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G+KPTYG SR G+I+FA SLDQ G +TR V DSA++L AIAG+D D+T V Sbjct: 183 PASFCSVTGLKPTYGLVSRYGLIAFASSLDQIGPLTRDVADSAVMLNAIAGHDPRDSTSV 242 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P DY L +S++GM +G+PKEY +S + + + + ++ G I E SLP Sbjct: 243 PQPEEDYYGCLGRSVKGMKLGVPKEYFAQGVSAEVTEAVKAALKVYEELGCSIEECSLPT 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMI 365 T YAL YYII+P+EAS+NLARYDGV+YG D + E E TR +GFG EVK RIM+ Sbjct: 303 TSYALAVYYIIAPSEASANLARYDGVKYGFSYRETDSMWEAMEKTRGLGFGPEVKRRIML 362 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD+ Y++A+K+RT+I+R+F AFE+ D ++TPT PT F +G++ + S Sbjct: 363 GTYALSAGYYDAWYVKAQKVRTVIRREFDAAFEK-YDALVTPTAPTVPFKIGEKAADPFS 421 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M +D+ T+ +N+AGLPA+++P +++P+GLQLIG+PF E+T+ ++G ++ Sbjct: 422 M--YLSDICTIPINIAGLPALALPGGFA-RELPIGLQLIGKPFSEKTILNLGHAYQQ 475 >gi|19746723|ref|NP_607859.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS8232] gi|39931599|sp|Q8NZM0|GATA_STRP8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|19748949|gb|AAL98358.1| putative Glutamyl-tRNA Gln amidotransferase subunit A [Streptococcus pyogenes MGAS8232] Length = 488 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|296393555|ref|YP_003658439.1| glutamyl-tRNA(gln) amidotransferase subunit A [Segniliparus rotundus DSM 44985] gi|296180702|gb|ADG97608.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Segniliparus rotundus DSM 44985] Length = 498 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 219/498 (43%), Positives = 312/498 (62%), Gaps = 19/498 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + + + +RSK++S+VE+V +++ I + +++A++ V +A A A D+ Sbjct: 7 EITTSSAAHLAELIRSKELSSVEVVQAHLGRIGEVDERLHAFLHVAGDEALATARSVDES 66 Query: 63 IINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L G+P+ +KD F TKG+ T A S ILDG+R Y++TVT+KL G +LG Sbjct: 67 LARGEAPASPLAGVPVALKDIFTTKGMPTTAGSKILDGWRSPYDATVTEKLRRAGLPILG 126 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N DEFAMGSS E S YGP +PW TPGGS GG+SAA+A F ++GTDT Sbjct: 127 KTNTDEFAMGSSTENSAYGPTRNPWDLAR-----TPGGSGGGNSAALAAFEAPLAVGTDT 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D Sbjct: 182 GGSIRQPAALTGTVGVKPTYGTVSRYGMIACASSLDQGGPGARTVLDAALLHEVIAGHDP 241 Query: 241 CDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D T VP A ++G+ VG+ KE P ++ + ++ G Sbjct: 242 KDGTSTKRAVPSVVEAAKAGAAGDLKGLKVGVVKELHGYGYQPGAYAAFEAAVRQVQALG 301 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGK-DILEMYENTRSI 353 A+ VE+S PH +A+PAYY+I P+E SSNLAR+DGVRYG RV +G+ D+ + +RS Sbjct: 302 AEAVEVSCPHFPFAMPAYYLILPSEVSSNLARFDGVRYGARVGDDGRADVASVMTASRSS 361 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK R++IGTY LS+ YD+ Y +A+K+R L+ +DF A+E+ VDVIL PTTPT+A Sbjct: 362 GFGPEVKRRVIIGTYALSAGYYDAFYGQAQKVRALVAQDFDRAYER-VDVILAPTTPTTA 420 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREET 472 FPLG+ ++ +M D+ T+ N+AG P +SVPA + +P+GLQ++ ++ Sbjct: 421 FPLGERVDDPVAMYRF--DLCTIPTNLAGHPGMSVPAGFSADDGLPVGLQILAPALADDR 478 Query: 473 LFSVGQIIEKEAGYFRPH 490 L+ VG E G PH Sbjct: 479 LYRVGAAYEAARGPL-PH 495 >gi|294790559|ref|ZP_06755717.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Scardovia inopinata F0304] gi|294458456|gb|EFG26809.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Scardovia inopinata F0304] Length = 509 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/478 (44%), Positives = 307/478 (64%), Gaps = 18/478 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ S+ D+L + ++S+ +LV+++++ I + ++A+++V +A A A+E+D+R G Sbjct: 4 LSASQMADKLAAGEVSSRQLVEAHMEVINAAEGDIHAFLKVSEDQAYAQADEADRRRATG 63 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI IKD TKGI T A S IL+G+ P Y++TV +K+ G +LGK N+D Sbjct: 64 EQDGPLAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKIKKVGMPILGKTNLD 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS E S +GP +PW + + PGGS GGS+AAVA F ++GTDTGGSIR Sbjct: 124 EFAQGSSTEHSAFGPTYNPWDT-----QRVPGGSGGGSAAAVAAFEAPLALGTDTGGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV D+A+L + I GYD D+T Sbjct: 179 QPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDAALLQEIIGGYDPKDSTS 238 Query: 246 VNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + PVP Q ++GM +G+ KE D ++ + + + L D GA +VE Sbjct: 239 IPQPVPALSEQARQGQKMDLKGMRIGLIKELSGDGFQKGVEDRFNESVQLLTDMGADVVE 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----EGKDILEMYENTRSIGFG 356 ISLPH +YAL AYY+I P+E SSNLARYDG+RYGLRV E + M TR GFG Sbjct: 299 ISLPHAEYALAAYYVIMPSEVSSNLARYDGMRYGLRVMPPDDEPQTAANMMAYTREAGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE VDV+++PT+P++AF Sbjct: 359 DEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFET-VDVLVSPTSPSTAFKF 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G++ +N M ND T+ N+AG+PA+S+P L + +P+G Q I ++ ++ Sbjct: 418 GEKMDNPLEM--YINDTATIPANLAGVPAMSIPCGLSDDGLPVGFQFIAHQMQDHKMY 473 >gi|269798058|ref|YP_003311958.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Veillonella parvula DSM 2008] gi|269094687|gb|ACZ24678.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Veillonella parvula DSM 2008] Length = 486 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 305/475 (64%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I ++AY+ +A A+ D+ I G+A Sbjct: 4 IHELHKKLVNKEISAVELTNAVIAHKAKVEPTVHAYLSDSHDRALTIAKVVDEAIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V ++L DN + LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDELATCASKMLENFVPPYNASVIERLQDNHYISLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW ++D PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTTNPW-NIDCV----PGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AI+GYD D+T + Sbjct: 179 ASFCGVVGLKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAISGYDAKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY AL ++ + +G+PKE+ + L+ + K ++ I K GA+IVEISLP++ Sbjct: 239 GARVDYTTALVNDVKNLKIGVPKEFFGEGLNSEVRKAMEEAIETYKKLGAEIVEISLPNS 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YG+RV ++++M TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGMRVPADNLVDMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R LIK +F EAF + VD+ILTPT P +++ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRLIKNEFDEAFSK-VDLILTPTAPNTSYKFGEKANDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSNSNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|169825832|ref|YP_001695990.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lysinibacillus sphaericus C3-41] gi|229485893|sp|B1HTW9|GATA_LYSSC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|168990320|gb|ACA37860.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lysinibacillus sphaericus C3-41] Length = 487 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/488 (44%), Positives = 314/488 (64%), Gaps = 13/488 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + E + +++ ++S +L + I + + A++ +KA A A E DK + Sbjct: 7 SAKELQAEIKAGNLSIADLTKEAYERIAKLDGDVQAFLASNEEKATAQAAEMDKVPFE-E 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T+G+ T S IL+GF P Y++TV KL + G + +GKLNMDEF Sbjct: 66 RGPLFGLPIGVKDNIVTEGLETTCASKILEGFMPIYDATVVNKLREAGMITVGKLNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SYY +PW PGGSSG S+A+VA S+G+DTGGSIRQP Sbjct: 126 AMGSSNENSYYKTTKNPWNL-----NHVPGGSSGASAASVAAGEVPFSLGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITR V D+A+LL+AIAG D D+T + Sbjct: 181 AAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNALLLEAIAGLDPNDSTSAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VP+Y AL ++G+ + +PKE+ + + ++ + LK GA + E+SLPH+ Sbjct: 241 VEVPNYAAALTGDVKGLRIAVPKEFLGEGVGEAARQSVLAALEVLKGLGATVEEVSLPHS 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL AYYI+S +EASSNL+R+DG+RYG R E +++++Y+ TR+ GFG EVK RIM+G Sbjct: 301 KYALAAYYILSSSEASSNLSRFDGIRYGFRAENVTNLMDLYKETRAQGFGDEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++Y +A++ RTLIK D+ + FE DVI+ PT+PT AF +G EN M Sbjct: 361 TYSLSAGTYDAYYKKAQQARTLIKADYDKVFED-FDVIIGPTSPTPAFKIG--ENVDDPM 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ +N+AG+PAIS+P + +PLGLQ+IG+ F E T++ V E+ + Sbjct: 418 TMYANDILTIPMNLAGVPAISIPCGF-DNGLPLGLQIIGKYFDEATIYRVAHAFEQATEF 476 Query: 487 FR--PHKW 492 + P W Sbjct: 477 HKQVPQMW 484 >gi|227892261|ref|ZP_04010066.1| possible amidase [Lactobacillus salivarius ATCC 11741] gi|227865902|gb|EEJ73323.1| possible amidase [Lactobacillus salivarius ATCC 11741] Length = 487 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 211/477 (44%), Positives = 310/477 (64%), Gaps = 11/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D L +K S EL S I+ + ++ A++++ ++A A + D+R + D+ L+ Sbjct: 12 HDDLVNKKYSVEELTKSTFDNIKKVDKEIEAFLKLDEERALEKARKIDERGVKADSI-LD 70 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GI IGIKD TK + T A S +L+ F P Y +TV KL D G + +GKLNMDEFAMGSS Sbjct: 71 GIGIGIKDNIVTKDLTTTAASKMLENFEPIYNATVMDKLNDAGMITVGKLNMDEFAMGSS 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + + W D+T PGGSSGGS+AAVA AS+G+DTGGSIRQPA+F G Sbjct: 131 TENSAFKITKNVW---DTTK--VPGGSSGGSAAAVASGQVLASLGSDTGGSIRQPAAFNG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+I+FA SLDQ G +TRTV+D+A++L AI+G+D D T + VPD Sbjct: 186 IVGVKPTYGRVSRYGLIAFASSLDQIGPLTRTVKDNALVLNAISGHDAHDFTSSSREVPD 245 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + + ++ ++GM + +PKEY + + + + + + GA + E+SLPH++Y +P Sbjct: 246 FTKGIEDGVKGMRIAVPKEYFGEGVDEDVANAVKDAVKTFESLGATVDEVSLPHSKYGVP 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYII+ +EASSNL RYDG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS Sbjct: 306 VYYIIASSEASSNLQRYDGIRYGFRAKDVKNLEDVYVRSRSEGFGDEVKRRIMLGTFSLS 365 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD+ + +A ++RTLI +DF ++ D+IL PT+PT+A+ +G+E N+ +M N Sbjct: 366 AGSYDAFFKKAAQVRTLICQDFENVYKD-YDLILAPTSPTTAYGIGEEINDPVTM--YMN 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D+ T+ VN+AGLP +S+PA +P+GLQLI F E T++ G E+ + + Sbjct: 423 DILTIPVNLAGLPGMSLPAGFS-NGLPIGLQLIAPRFAESTMYRAGYAFEQSTDFHK 478 >gi|308234787|ref|ZP_07665524.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gardnerella vaginalis ATCC 14018] gi|311113952|ref|YP_003985173.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gardnerella vaginalis ATCC 14019] gi|310945446|gb|ADP38150.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gardnerella vaginalis ATCC 14019] Length = 513 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/484 (45%), Positives = 312/484 (64%), Gaps = 20/484 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ ++ +++K++S+ ELV++++ IE + ++ A++ V A A A+ DK+ Sbjct: 6 DLVKLSAADMAKAVKAKEVSSRELVEAHLAVIEAAEPEIKAFLHVSADVALEQADAFDKK 65 Query: 63 IINGDAR---DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 NG+A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 66 NANGEAEGLPELAGVPIAIKDMIVTKGIPTTAASKILEGWVPPYDATVIEKLKAAGMPIL 125 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 126 GKTNLDEFAQGSSTEHSAYQTTCNPWDT-----ERVPGGSGGGSAAAVAAFEAPIALGTD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G D Sbjct: 181 TGGSIRQPGALTGTVGAKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQETIGGND 240 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVP +A + ++G+ VG+ KE + P ++ + + + LKD Sbjct: 241 RRDSTSIPAPVPPMAQAAREGARRDLKGLKVGLVKELSGEGFQPGVEARFNEAVQLLKDM 300 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----EGKDILEMYENT 350 GA++ E+S PH Y+L AYYII P+E SSNLARYDG+RYGLRV + + M T Sbjct: 301 GAEVTEVSCPHFPYSLAAYYIIMPSEVSSNLARYDGMRYGLRVMPPADKPQTAANMMAAT 360 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI RDF EAF + VDV+++PT+P Sbjct: 361 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFEEAFNK-VDVLVSPTSP 419 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+AF G++ N+ SM ND+ T+ NMAG+PA+S+PA L + +P+G+Q+I + Sbjct: 420 TTAFKFGEKMNDPLSM--YMNDIATIPANMAGVPALSLPAGLSDDGLPVGIQIIAPQCHD 477 Query: 471 ETLF 474 E ++ Sbjct: 478 EKMY 481 >gi|322412606|gb|EFY03514.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 488 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDIKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|326405738|gb|ADZ62809.1| aspartyl-tRNA Asn/glutamyl-tRNA Gln amidotransferase subunit A [Lactococcus lactis subsp. lactis CV56] Length = 488 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/485 (44%), Positives = 308/485 (63%), Gaps = 11/485 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N ++ E + L +K+ISA+EL + + I Q++A++++ +KA A D R I Sbjct: 4 NNKSIKELHELLVNKEISALELTKATLSDISAREPQIDAFLKITEEKALQDAAAIDARGI 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D +GI I +KD T+GI T A S IL G+ P Y +TV KL ++G + +GKLNM Sbjct: 64 NPDVV-TDGISIAVKDNIVTEGIETTAASKILGGWIPPYSATVANKLSESGLITIGKLNM 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG S E S P + W D T PGGSS GS+A+VA S+G+DTGGSI Sbjct: 123 DEFAMGGSGENSSVKPTKNAW---DQTK--VPGGSSSGSAASVASGQVRLSLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYGR SR G+I+FA SLDQ G + TV ++A LL I+G+D+ D+T Sbjct: 178 RQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLAPTVEENAQLLNVISGFDKNDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ + Q I+GM + +PKEY + + + + L+ GA + E+SL Sbjct: 238 SSNVAVPDFTSKIGQDIKGMKIALPKEYFGEGIDEKVKEQILAAAKHLEKLGAIVEEVSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 PH++Y + YYII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RI Sbjct: 298 PHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDIKNLEDLYVKSRSEGFGSEVKRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LS+ YD H+ +A ++RTLI DF + FE+ D+IL PTTPT A+ LG ++ Sbjct: 358 MLGTFSLSAGSYDKHFKKAGQVRTLIINDFAKVFEK-YDLILGPTTPTPAWDLGARVDDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM D+ T+ VN+AGLP IS+PA + +P+G+QLIG+ + EET++ V E Sbjct: 417 LSM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGMQLIGKRYDEETIYQVAAAFEAT 473 Query: 484 AGYFR 488 + + Sbjct: 474 TDFHK 478 >gi|37521097|ref|NP_924474.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gloeobacter violaceus PCC 7421] gi|39931344|sp|Q7NKF0|GATA_GLOVI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|35212093|dbj|BAC89469.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gloeobacter violaceus PCC 7421] Length = 489 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 219/487 (44%), Positives = 319/487 (65%), Gaps = 16/487 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING- 66 ++ + R ++ SK+ SAVE+ Y++ E +++++A++ + ++A AAAE D +I G Sbjct: 3 SIGQLRSQVASKERSAVEVARQYLERAERLDTEVHAFLRLTPERALAAAEAVDAKIARGE 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D L G+P+ +KD GI T S IL+ +RP YESTVT++L + GA+++GK N+DE Sbjct: 63 DPGLLAGVPVAVKDNLCMVGIPTTCASKILENYRPPYESTVTRRLEEQGALIIGKTNLDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S +GP +PW PGGSSGGS+AAVA AS+G+DTGGSIRQ Sbjct: 123 FAMGSSTENSAFGPTRNPWDL-----GRVPGGSSGGSAAAVAACEAVASLGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G+I+FA SLDQ G TRTV D+A++L+AIAG+D D+T + Sbjct: 178 PASFCGVVGLKPTYGLVSRYGLIAFASSLDQIGPFTRTVEDAALVLQAIAGHDPLDSTSL 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + VPDY +AL ++G+ VG KE+ + L P + + I ++D GA+I E+S P Sbjct: 238 AVNVPDYRQALISDLKGVKVGFVKEFFAEGLDPDVADAVFEAIEVMRDLGAQIQEVSCPR 297 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMI 365 L YYII+ +EAS+NLARYDGV+YGLR E ++ MY TR GFG EVK RIM+ Sbjct: 298 FARGLSTYYIIATSEASANLARYDGVKYGLRDREADALVPMYGRTREEGFGSEVKRRIML 357 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++YL+A+K+RTLIK+D+ +AF + VDV++ PT PT+AF G + ++ S Sbjct: 358 GTYALSAGYYDAYYLKAQKVRTLIKQDYLDAFAK-VDVLVGPTAPTTAFAFGDKVSDPLS 416 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D++T+ +N+AG+ S+P K +P+G Q++ E G+++ Sbjct: 417 M--YLSDIYTIPLNLAGVAGASIPCGFDAKGLPIGFQIMANALEE------GKLLRAAYA 468 Query: 486 YFRPHKW 492 Y + +W Sbjct: 469 YEQATEW 475 >gi|20454936|sp|Q9RF07|GATA_STAAU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|6578924|gb|AAF18136.1|AF205033_2 glutamyl-tRNAGln amidotransferase subunit A [Staphylococcus aureus] Length = 485 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/464 (45%), Positives = 309/464 (66%), Gaps = 13/464 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEG 73 ++ K I ++V AIE ++ + +++ + + A A+E D+ + D D L G Sbjct: 15 IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE-LQAKDQMDGKLFG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+GIKD T G+ T S +L+GF P YESTV +KL + AV++GKLNMDEFAMG S Sbjct: 74 IPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETS ++P+ K PGGSSGGS+AAVA L S+G+DTGGSIRQPA++ G Sbjct: 134 ETSISKKTVNPFDH-----KAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D D+T + D+ Sbjct: 189 VGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADANDSTSAPVDDVDF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + + I+G+ V +PKEY + ++ + + Q + LK GA + E+SLP+T++ +P+ Sbjct: 249 TSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPS 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ +EASSNL+R+DG+RYG E + E+Y+ +RS GFG+EVK RI +GT+ LSS Sbjct: 309 YYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +++K+RTLIK DF + FE DV++ PT PT+AF LG+E ++ +M ND Sbjct: 369 GYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGEEIDDPLTM--YAND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + T VN+AGLP ISVP + P+GLQ IG+PF E+TL+ V Sbjct: 426 LLTTPVNLAGLPGISVPCGQSNGR-PIGLQFIGKPFDEKTLYRV 468 >gi|188587642|ref|YP_001919831.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum E3 str. Alaska E43] gi|229485871|sp|B2UZ26|GATA_CLOBA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|188497923|gb|ACD51059.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum E3 str. Alaska E43] Length = 485 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 211/492 (42%), Positives = 321/492 (65%), Gaps = 12/492 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M N+ A E +D + K++S E+ ++++ ++N ++++NA++ + ++A A+ D Sbjct: 1 MDFTNYKA-HELKDLISKKEVSVEEVTKAHLENVKNIDAKVNAFLYIAEEEALNDAKALD 59 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +++ G D L G P+GIKD + K + S IL+G+ Y++TV++ + G V+L Sbjct: 60 EKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVIL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSS E S Y +PW +D PGGSSGGS+AAVA ++GTD Sbjct: 120 GKLNMDEFAMGSSTENSAYKITRNPW-DLDRV----PGGSSGGSAAAVASKEVPLALGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF G VG+KPTYGR SR G++++ +LDQ G + R V+D A+L + I+G D Sbjct: 175 TGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVKDCALLTQVISGVD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T N+ VP+YE +L ++I+G + +PKE+ D L P + K+ + K GA+I Sbjct: 235 HRDFTTANINVPNYENSLSENIKGKKIALPKEFFKDGLDPKVQKSIYDALEVFKANGAEI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 E+SLP YA+ AYY+++ AEASSNLAR+DGVRYG R E +D +++Y +RS FG+E Sbjct: 295 TEVSLPLADYAISAYYLLACAEASSNLARFDGVRYGHRSESVEDAVDVYFKSRSEAFGKE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTY LS+ YD++Y +A K+R LIK +F F+ D I++PT PT A+ +G+ Sbjct: 355 VKKRIMLGTYALSAGYYDAYYKKALKVRNLIKGEFENIFKD-FDAIISPTAPTPAYKIGE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N+ M D++TV VN+AG+PAIS+P + + +P+GLQ++G F+E+TLF++ Sbjct: 414 KTENALEM--YLGDIYTVPVNIAGIPAISLPCGVAD-GLPVGLQIMGNYFKEDTLFNLAY 470 Query: 479 IIEKEAGYFRPH 490 E+ + H Sbjct: 471 SYEQSTKWHEMH 482 >gi|50914847|ref|YP_060819.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS10394] gi|73919623|sp|Q5XAC7|GATA_STRP6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|50903921|gb|AAT87636.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus pyogenes MGAS10394] Length = 488 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALRQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|283782618|ref|YP_003373372.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gardnerella vaginalis 409-05] gi|283441703|gb|ADB14169.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gardnerella vaginalis 409-05] Length = 513 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/484 (45%), Positives = 313/484 (64%), Gaps = 20/484 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ ++ +++K++S+ ELV++++ IE + ++ A++ V A A A+ DK+ Sbjct: 6 DLVKLSAADMAKAVKAKEVSSRELVEAHLAVIEAAEPEIKAFLHVSADVALEQADAFDKK 65 Query: 63 IINGDAR---DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 NG+A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 66 NANGEAEGLPELAGVPIAIKDMIVTKGIPTTAASKILEGWVPPYDATVIEKLKAAGMPIL 125 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 126 GKTNLDEFAQGSSTEHSAYQTTCNPWDT-----ERVPGGSGGGSAAAVAAFEAPIALGTD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G D Sbjct: 181 TGGSIRQPGALTGTVGAKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGND 240 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVP +A + ++G+ VG+ KE D P ++ + + + LKD Sbjct: 241 RRDSTSIPAPVPPMAQAAREGARRDLKGLKVGLVKELSGDGFQPGVEARFNEAVQLLKDM 300 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----EGKDILEMYENT 350 GA++ E+S PH Y+L AYYII P+E SSNLARYDG+RYGLRV + + M T Sbjct: 301 GAEVTEVSCPHFPYSLAAYYIIMPSEVSSNLARYDGMRYGLRVMPPADKPQTAANMMAAT 360 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI RDF EAF++ VDV+++PT+P Sbjct: 361 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFEEAFKK-VDVLISPTSP 419 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+AF G++ ++ SM ND+ T+ NMAG+PA+S+PA L + +P+G+Q+I + Sbjct: 420 TTAFKFGEKMDDPLSM--YMNDIATIPANMAGVPALSLPAGLSDDGLPVGIQIIAPQCHD 477 Query: 471 ETLF 474 E ++ Sbjct: 478 EKMY 481 >gi|182419364|ref|ZP_02950616.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium butyricum 5521] gi|237666559|ref|ZP_04526544.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376695|gb|EDT74267.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium butyricum 5521] gi|237657758|gb|EEP55313.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 485 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 210/490 (42%), Positives = 322/490 (65%), Gaps = 11/490 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E + E ++ + K+ S E+ +++ IEN +S+++A++ V ++A A+E D++ Sbjct: 2 EFSNYKAHELKEIIAKKEASVEEVTKAHLDKIENIDSKVDAFLYVAKEEALIQAKELDEK 61 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G D L G+P+G+KD + KG+ S IL+G+ Y+STV++ + G V++GK Sbjct: 62 LSKGEDLGVLGGVPLGVKDNISVKGMQNTCASKILEGYISPYDSTVSEMIKSEGGVIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFAMGSS E S + +PW +D PGGSSGGS+AAVA + ++GTDTG Sbjct: 122 LNMDEFAMGSSTENSAFKKTRNPW-DLDRV----PGGSSGGSAAAVAAKEVSIALGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPASF G VG+KPTYGR SR G++++ +LDQ G + R V+D A+L +AIAG D Sbjct: 177 GSVRQPASFCGIVGLKPTYGRVSRNGVVAYGSTLDQVGTLGRDVKDCAMLTQAIAGMDNR 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T ++ VP+Y +L+ +I+G + +P E+ + L + K + + GA++ E Sbjct: 237 DFTTADIKVPNYFDSLNTNIKGKKIAVPTEFFKEGLDENVKKAVYDALKVFEANGAEVKE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 +SLP YA+ AYY+++ AEASSNLAR+DGVRYG R + +D +E+Y +RS GFG+EVK Sbjct: 297 VSLPLADYAISAYYLVACAEASSNLARFDGVRYGKRAKDIEDSVELYFKSRSEGFGKEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LS+ YD++Y +A K+R LIK DF + F + D I++PT PT+A+ +G++ Sbjct: 357 KRIMLGTYALSAGYYDAYYKKALKVRNLIKGDFDKIFGE-FDAIISPTAPTTAYKIGEKT 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +N+ M D++TV VN+AG+PAIS+P L + +P+GLQ++G FRE+TLF++ Sbjct: 416 DNALEM--YLGDIYTVPVNIAGIPAISLPCGLAD-GLPVGLQIMGNYFREDTLFNLAYSY 472 Query: 481 EKEAGYFRPH 490 E+ + H Sbjct: 473 EQSTNWHEMH 482 >gi|294791932|ref|ZP_06757080.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Veillonella sp. 6_1_27] gi|294457162|gb|EFG25524.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Veillonella sp. 6_1_27] Length = 486 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/475 (45%), Positives = 304/475 (64%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I ++AY+ +A A A+ D+ I G+A Sbjct: 4 IHELHKKLVNKEISAVELTNAVIAHKAKVEPTVHAYLSDSHDRALATAKLVDEAIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V ++L DN + LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDEPATCASKMLENFVPPYNASVIERLQDNHYISLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW + PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTTNPWNA-----DCVPGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AI+G+D D+T + Sbjct: 179 ASFCGVVGLKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAISGHDTKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY AL ++ + +G+PKE+ + L+ + K ++ I K GA+I+E+SLP++ Sbjct: 239 GTRVDYTTALVNDVKNLKIGVPKEFFGEGLNSEVRKAVEEAIETYKKLGAEIIEVSLPNS 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YG+RV ++++M TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGMRVPADNLVDMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R LIK +F EAF + VD+ILTPT P +++ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRLIKNEFDEAFSK-VDLILTPTAPNTSYKFGEKANDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSNNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|297202538|ref|ZP_06919935.1| glutamyl-tRNA amidotransferase subunit A [Streptomyces sviceus ATCC 29083] gi|197709934|gb|EDY53968.1| glutamyl-tRNA amidotransferase subunit A [Streptomyces sviceus ATCC 29083] Length = 500 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 219/482 (45%), Positives = 322/482 (66%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E+ +++ S +++AV++ ++++ IE + +++A++ V + A A A D++ G Sbjct: 10 LTAAETAEKIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRERG 69 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD F T+GI T S IL+G+ P Y++T+T++L V+LGK NMD Sbjct: 70 EKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATLTKRLKAADVVILGKTNMD 129 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D T PGGS GGSSAA+A + +IGTDTGGSIR Sbjct: 130 EFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALAAHMAPLAIGTDTGGSIR 184 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T Sbjct: 185 QPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTS 244 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S++GM VG+ K++R + + + + + ++ LK+ GA+IVE+ Sbjct: 245 IDAPVPAVVEAARNGSVEGMRVGVVKQFRGEGYQAGVIQRFDESVALLKELGAEIVELDC 304 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVK 360 P AL AYY+I+P+E SSNLAR+DG+RYG R G D E+ TR+ GFG EVK Sbjct: 305 PSFDLALSAYYLIAPSECSSNLARFDGLRYGRRT-GDDGTHSAEEVTSLTRAEGFGPEVK 363 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y A+K+RTLI RDF +AFEQ VDVI++PTTPT+AFP+G+ Sbjct: 364 RRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFEKAFEQ-VDVIVSPTTPTTAFPIGERA 422 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 423 DD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPALKDDRLYKVGAA 480 Query: 480 IE 481 +E Sbjct: 481 VE 482 >gi|94994963|ref|YP_603061.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS10750] gi|166217719|sp|Q1J569|GATA_STRPF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|94548471|gb|ABF38517.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus pyogenes MGAS10750] Length = 488 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 293/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYTEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|71904158|ref|YP_280961.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS6180] gi|109891990|sp|Q48RQ4|GATA_STRPM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|71803253|gb|AAX72606.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS6180] gi|323127954|gb|ADX25251.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 488 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 293/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|303325577|ref|ZP_07356020.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio sp. 3_1_syn3] gi|302863493|gb|EFL86424.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio sp. 3_1_syn3] Length = 488 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 228/495 (46%), Positives = 318/495 (64%), Gaps = 15/495 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ ++++ L+ K+ISAVE + + +E + ++ A + V A+ A A A E D Sbjct: 1 MTEICSLSLTAVAGALQKKEISAVEAAQACLTRMEATEPRIAAMLRVDAEGALARARELD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + A+ L G+P+ +KD +TKG+ T A S IL GF P Y++ +KL GAV+LG Sbjct: 61 AAGPD-PAQALWGVPVTVKDALSTKGLPTTAGSRILAGFVPIYDAFAVEKLRRAGAVLLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMGS E S Y +PW + PGGSSGGS+A+VA C AS+GTDT Sbjct: 120 KANLDEFAMGSGTENSAYQKTRNPWNTAK-----VPGGSSGGSAASVAAGQCFASLGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G VG+KPTYGR SR G+I++ SLDQ G +TR+V D A +L IAG+D Sbjct: 175 GGSIRQPASFCGCVGLKPTYGRVSRYGLIAYGSSLDQIGPLTRSVEDCARVLSVIAGHDP 234 Query: 241 CDATCVNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D TC PV DY AL Q+ ++G+ +G+PKE+ D L+P + + I+ ++ GA Sbjct: 235 RDGTCDPRPVEDYAAALPQNSADLKGVRLGLPKEFFGDGLAPEVRAACEAAIARARELGA 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFG 356 + VE+SLPHT A+ YYII+ AEASSNLAR+DGVRYG R + K++ E+Y +RS GFG Sbjct: 295 EPVEVSLPHTDAAIATYYIIAMAEASSNLARFDGVRYGRRAPDVKNLEELYVKSRSEGFG 354 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 QEVK RIM+G YVLSS YD++Y +A ++R LI+ ++ A EQ DV+ P +P +A+ L Sbjct: 355 QEVKRRIMLGAYVLSSGYYDAYYRKAAQVRRLIRDEYLAALEQ-CDVLCAPVSPVTAWDL 413 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFS 475 G + + D +T+++N+AGLP +S+P L E KMP+GLQLIG F E L Sbjct: 414 GSHAAD--PLQAYLMDAYTLSLNLAGLPGLSLPVGLGAESKMPVGLQLIGPAFGETRLLG 471 Query: 476 VGQIIEKE-AGYFRP 489 +G +E+ G RP Sbjct: 472 IGHALERALPGIGRP 486 >gi|169333736|ref|ZP_02860929.1| hypothetical protein ANASTE_00120 [Anaerofustis stercorihominis DSM 17244] gi|169259585|gb|EDS73551.1| hypothetical protein ANASTE_00120 [Anaerofustis stercorihominis DSM 17244] Length = 486 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 210/482 (43%), Positives = 310/482 (64%), Gaps = 20/482 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E R+ L K++SA E+++SYI IE +++++A++ A+ A+ES++RI+ G+ Sbjct: 8 IYELRELLDKKEVSASEVLNSYIDRIEAVDTKLDAFLTKTFDLAKKNAKESEERILKGET 67 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L+GIP +KD TK I T S +LD F P Y +TV +KL +GAV+LGK++MDEF Sbjct: 68 LSVLDGIPYALKDNMCTKDIRTTCSSKLLDNFIPPYSATVYKKLQKSGAVLLGKVDMDEF 127 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S Y V +PW + PGGSSG + +V+ A S+G+DTGGSIR P Sbjct: 128 AMGSSNENSAYHIVKNPWDT-----SRVPGGSSGACAVSVSAGEAAFSLGSDTGGSIRTP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G G+KPTYGR SR G+++FA SLDQ G + ++D A +L IAG+DE D+T + Sbjct: 183 AAFCGVTGLKPTYGRVSRYGLVAFASSLDQIGPFGKDIKDVASVLNVIAGHDENDSTSMK 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRL---DYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + VPDY L + I+GM VG+ +Y L + + + ++ I K+ GA+IV+IS Sbjct: 243 VDVPDYTSFLSEDIKGMKVGV--DYALLDENKIDKDVVYNIRKAIDKFKEMGAEIVDISF 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 YA+P YY+IS +EASSNL+R+DG+RYG+R EG+ + ++ N+R+ GFG+EVK RI+ Sbjct: 301 DCFDYAIPVYYLISSSEASSNLSRFDGIRYGVREEGETLEDIIINSRTKGFGEEVKRRIL 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD +Y +A K+R LIK + + F++ D++LTPTTP AF +G++ + Sbjct: 361 LGTYALSAGYYDMYYNKALKVRKLIKDLYNDIFKK-CDIVLTPTTPGEAFKIGEKTTDQT 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M D+FTV N+ G+PA S+P + E MP+GLQ+ F E G+II+ Sbjct: 420 QM--YLADIFTVTANLVGIPAASIPCGMSENGMPIGLQISANVFDE------GKIIKAAY 471 Query: 485 GY 486 Y Sbjct: 472 NY 473 >gi|283781969|ref|YP_003372724.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pirellula staleyi DSM 6068] gi|283440422|gb|ADB18864.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pirellula staleyi DSM 6068] Length = 512 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 215/520 (41%), Positives = 303/520 (58%), Gaps = 43/520 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ A + D L ++ +S+ EL IE +S++ A++ + A A A+ D Sbjct: 1 MSNLHKSATELAAD-LAARRVSSAELTAEVFARIEAVDSRVGAFLSTDREGALATAKSID 59 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+PI +KD TKG T S +L F P Y+STV KL AV++ Sbjct: 60 DRRARGEKLGLLAGLPIAVKDVLCTKGQKTTCASKMLANFVPPYDSTVVAKLRAADAVIV 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMG S E S G +PW PGGSSGG++A +A + SIGTD Sbjct: 120 GKTNMDEFAMGGSTENSALGKTANPWDL-----SRVPGGSSGGAAACLAASMVPLSIGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G G+KPTYGR SR G+++FA SLDQ G + T D+A+LL+AIAG+D Sbjct: 175 TGGSIRQPAALCGVTGLKPTYGRVSRYGLVAFASSLDQVGPMAWTAADNALLLEAIAGHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T ++PVP Y +++D+ + G+ +G+ +E+ + LS ID ++ + + GAK+ Sbjct: 235 PLDSTSTDIPVPAYSQSVDKPLAGLKLGLVREHFGEGLSSEIDSAIREAMRVYESLGAKV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--------------- 344 E+SL H +Y + YYII+P EASSNLARYDGV YG R + K +L Sbjct: 295 EEVSLLHAKYGIAVYYIIAPCEASSNLARYDGVHYGYRTDEKTMLAELAEEREKLEKSGD 354 Query: 345 ------------EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 +Y TR+ GFG EVK RIM+GTY LS+ YD++YL+A K+R LI+ D Sbjct: 355 RAAIAALDSPLVRLYRKTRAEGFGSEVKRRIMLGTYALSAGYYDAYYLKALKVRRLIRGD 414 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 + AF + VD I+ PTTP AF L ++ + SM D++TV N+AG+ +SVP L Sbjct: 415 YDAAFAK-VDFIVGPTTPNPAFKLAEKTGDPLSM--YLEDLYTVTANLAGIGGMSVPCGL 471 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P+GLQ+ +PF EE ++++ A Y R W Sbjct: 472 TSSGLPIGLQIQCRPFDEE------RLLQAAAMYQRATDW 505 >gi|282850285|ref|ZP_06259664.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Veillonella parvula ATCC 17745] gi|282579778|gb|EFB85182.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Veillonella parvula ATCC 17745] Length = 486 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/475 (45%), Positives = 304/475 (64%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I ++AY+ +A A+ D+ I G+A Sbjct: 4 IHELHKKLVNKEISAVELTNAVIAHKAKVEPTVHAYLSDSHDRALTIAKVVDEAIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V ++L DN + LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDEPATCASKMLENFVPPYNASVIERLQDNHYISLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW ++D PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTTNPW-NIDCV----PGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AI+GYD D+T + Sbjct: 179 ASFCGVVGLKPTYGNVSRYGLIAFASSLDQIGPVTRNVTDAALVLNAISGYDAKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY L ++ + +G+PKE+ + L+ + K ++ I K GA+IVEISLP++ Sbjct: 239 GARVDYTTTLINDVKNLKIGVPKEFFGEGLNSEVRKAMEEAIETYKKLGAEIVEISLPNS 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YG+RV ++++M TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGMRVPADNLVDMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R LIK +F EAF + VD+ILTPT P +++ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRLIKNEFDEAFSK-VDLILTPTAPNTSYKFGEKANDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSSNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|73668422|ref|YP_304437.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina barkeri str. Fusaro] gi|109891955|sp|Q46E35|GATA_METBF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|72395584|gb|AAZ69857.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanosarcina barkeri str. Fusaro] Length = 475 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 201/482 (41%), Positives = 306/482 (63%), Gaps = 18/482 (3%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 +M+V++ ++++ K+ SA E+ Y+ I S++N YI V + A E++ K + Sbjct: 3 KWMSVAQVKEKI--KESSAEEVTAQYLDTI--GKSKVNGYITV----SEKALEQAKKIDV 54 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L G+PI IKD + G+ S IL+ + P + + V +KL GAV+LGK NM Sbjct: 55 EGHNGPLAGVPIAIKDNISVVGLPNSCGSKILEDYIPPFNAYVIEKLLAAGAVILGKTNM 114 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS ETSY+GP +PW + PGGSSGGS+A VA ++G+DTGGS+ Sbjct: 115 DEFAMGSSTETSYFGPTANPWDL-----ERVPGGSSGGSAAVVAAGEAPFALGSDTGGSV 169 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G VG+KPTYG SR G++++A SL+Q G + V D A+L+ IAGYD D+T Sbjct: 170 RCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDIAVLMDVIAGYDRKDST 229 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ +Y++AL + ++G+ +G+PKE+ + + P ++K I +D GA E+S+ Sbjct: 230 SIDSKT-EYQKALIEDVKGLKIGVPKEFFGEGIHPDVEKAVWNAIHKCEDLGASWEEVSM 288 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PH +YAL +YYII+ +EASSNLAR+DG RYG R G++ M TR+ GFG EVK RI+ Sbjct: 289 PHIKYALASYYIIAMSEASSNLARFDGTRYGYRASGENWHAMVSKTRAEGFGTEVKRRIL 348 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ +D +YL+A K+RTL+K+DF +A + VDV++ PT P AF +G++ + Sbjct: 349 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSK-VDVLMAPTMPNPAFKIGEKIEDPL 407 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ++ +DV T +N+AG+P++SVP + +P+GLQ++G+PF E + E+ Sbjct: 408 TL--YLSDVNTCPINLAGVPSLSVPCGFTD-GLPIGLQIMGKPFDEPAVLRAAYTFEQNT 464 Query: 485 GY 486 Y Sbjct: 465 DY 466 >gi|21911076|ref|NP_665344.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS315] gi|28895238|ref|NP_801588.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes SSI-1] gi|39931590|sp|Q8K617|GATA_STRP3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|21905285|gb|AAM80147.1| putative glutamyl-tRNA Gln amidotransferase subunit A [Streptococcus pyogenes MGAS315] gi|28810484|dbj|BAC63421.1| putative glutamyl-tRNA Gln amidotransferase subunit A [Streptococcus pyogenes SSI-1] Length = 488 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 293/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDSDNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL +A D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVVASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYTEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|259502574|ref|ZP_05745476.1| glutamyl-tRNA(Gln) amidotransferase [Lactobacillus antri DSM 16041] gi|259169464|gb|EEW53959.1| glutamyl-tRNA(Gln) amidotransferase [Lactobacillus antri DSM 16041] Length = 490 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 223/484 (46%), Positives = 310/484 (64%), Gaps = 14/484 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +S+ D L +K ISA EL + I+ ++ Q+ A++ + + A A+ D+ I+ D Sbjct: 8 LSQLHDDLVNKKISATELTRETLDHIKGNDDQVKAFLTLDEEGAMKQAQAVDEAGISADQ 67 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD TKG+ T A S +L+ F P Y++TV +KL G V +GK N+DEFA Sbjct: 68 L-LAGIPLAVKDNILTKGLRTTAASKMLENFTPVYDATVVEKLKQAGYVNVGKTNLDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + +PW D T PGGSSGGS+AAVA ++GTDTGGSIR PA Sbjct: 127 MGSSTENSAFFTTHNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR GII+F S DQ G +TR+V+D+A L IAG DE D T Sbjct: 182 SFNGIVGMKPTYGRVSRWGIIAFGSSFDQVGWLTRSVKDNAYLTALIAGNDEHDTTSSLK 241 Query: 249 PVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 VPD+ L+ SI+G+ + +PKEY D L + + + L+ GA + E+SLPH Sbjct: 242 EVPDWAAQLNDSTSIKGLKIAVPKEY-YDGLRADVKAVIKAALDHLESLGATVDEVSLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 T +PAYYI++ +EASSNL RYDG+RYG R E K++ E+Y +RS GFG EVK RIM+ Sbjct: 301 THDGVPAYYILASSEASSNLQRYDGIRYGYRAPEAKNLEEVYVKSRSQGFGDEVKRRIML 360 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LS+ YD+++ +A K+R LI DFT+ F+ D+I+ T ++AF +G E ++ + Sbjct: 361 GTFSLSAGFYDAYFNKAAKVRRLISDDFTKVFKD-YDLIVGATGASTAFKIGAEIDDPKT 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M NDV TV VNMAGLPA+S+PA E MP+GLQLIG+PF E+T+++ G + E+ Sbjct: 420 M--YMNDVLTVPVNMAGLPAMSLPAGFSAEDGMPVGLQLIGKPFDEQTIYNTGYVFEQTT 477 Query: 485 GYFR 488 + + Sbjct: 478 DFHQ 481 >gi|302522067|ref|ZP_07274409.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces sp. SPB78] gi|318059493|ref|ZP_07978216.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces sp. SA3_actG] gi|318076488|ref|ZP_07983820.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces sp. SA3_actF] gi|302430962|gb|EFL02778.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces sp. SPB78] Length = 497 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/488 (44%), Positives = 322/488 (65%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ + + + +++ S +++AV++ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDIIRLTAARTAEKIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+G+ T S IL+G+ P Y++TVT++L D V+L Sbjct: 61 EKRARGEKLGPLAGVPLALKDIFTTEGVPTTVGSKILEGWIPPYDATVTRRLKDADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + + GM VG+ K++R + + + + + + LK+ GA+ Sbjct: 236 PLDSTSIDAPVPPVVEAARNGGVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLKELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTAITRGEG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK R+++GTY LSS YD++Y A+K+RTLI +DF AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRVILGTYALSSGYYDAYYGSAQKVRTLITQDFARAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ++ ++E L Sbjct: 414 PIGERSDD--PMAMYLADLCTIPANLAGNAAMSLPCGLAPEDGLPVGLQIVAPAMKDERL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|320104448|ref|YP_004180039.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Isosphaera pallida ATCC 43644] gi|319751730|gb|ADV63490.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Isosphaera pallida ATCC 43644] Length = 505 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/486 (44%), Positives = 309/486 (63%), Gaps = 23/486 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL E RDR+ D+SAVE+ +++ IE ++A++ + A A D+ Sbjct: 5 SELTRAGALELRDRIARGDVSAVEVARAHLDRIERFEPSIHAFLHRDPEATLAQARAIDQ 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G+ L G+PI +KD T+G+ T S +L +RP +++TV +KL + GAV++G Sbjct: 65 ARAAGEPLGRLAGVPIALKDVLCTRGVPTTCGSRMLANYRPPFDATVVRKLNEAGAVIVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGSS E S++GP +PW + TPGGSSGGS+AAVA ++GTDT Sbjct: 125 KVNMDEFAMGSSTENSHFGPTHNPWDL-----ERTPGGSSGGSAAAVAAGFAPLALGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG+KP+YGR SR G+++FA SLDQ G ++R+V D+A+LL IAG D Sbjct: 180 GGSIRQPAAFCGIVGLKPSYGRVSRFGLVAFASSLDQIGPMSRSVADAALLLNVIAGADP 239 Query: 241 CDATCVNLPVPDYERALDQSI---QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DATCV+ PVPDY L+ I + + VG E+ D L I Q + ++ GA Sbjct: 240 RDATCVDRPVPDYLAGLNDPIGPDRPLKVGYVPEFLTDGLDDRIKTAVDQALQTYRELGA 299 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----------EGKDILEM 346 +I E+ LPHT+ + AYYI++P EASSNLARYDG +G R E + M Sbjct: 300 EIREVHLPHTRIGIAAYYIVAPCEASSNLARYDGTIFGHRAADWSPASPGEEELSPTVRM 359 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 +R+ GFG EVK RIM+GT+ LS+ D +Y +A K+R LI++DF +AFEQ VDVI+ Sbjct: 360 MMASRAEGFGAEVKRRIMLGTFALSAGYADQYYNKALKVRRLIRQDFDQAFEQ-VDVIVG 418 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PTTPT AF LG++ ++ +M +DV+T+ N+AG+P +S+P L +++P+G+QL+ + Sbjct: 419 PTTPTPAFRLGEKTDDPLAM--YLSDVYTITANLAGIPGLSLPFGLTTERLPIGVQLLAK 476 Query: 467 PFREET 472 PF E T Sbjct: 477 PFDEPT 482 >gi|312868860|ref|ZP_07729046.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus oris PB013-T2-3] gi|311095600|gb|EFQ53858.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Lactobacillus oris PB013-T2-3] Length = 490 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 222/484 (45%), Positives = 310/484 (64%), Gaps = 14/484 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +S+ D L +K ISA EL I+ ++ Q+ A++ + + A A+ D+ I+ D Sbjct: 8 LSQLHDDLVNKKISATELTKETFDHIKANDDQVKAFLTLDEEGAMKQAQAVDEAGISADQ 67 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + GIP+ +KD TKG+ T A S +L+ F P Y++TV +KL G V +GK N+DEFA Sbjct: 68 L-VAGIPLAVKDNILTKGLRTTAASKMLENFNPVYDATVVEKLKQAGYVNVGKTNLDEFA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + +PW D T PGGSSGGS+AAVA ++GTDTGGSIR PA Sbjct: 127 MGSSTENSAFFTTHNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR GII+F S DQ G +TR+V+D+A L IAG DE D T Sbjct: 182 SFNGIVGMKPTYGRVSRWGIIAFGSSFDQVGWLTRSVKDNAYLTALIAGNDEHDTTSSLK 241 Query: 249 PVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 VPD+ L+ SI+G+ + +PKEY D L + + + + L+ GA + E+SLPH Sbjct: 242 AVPDWAAQLNDSTSIKGLKIAVPKEY-YDGLRADVKEVIKAALDHLESLGATVDEVSLPH 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 T +PAYYI++ +EASSNL RYDG+RYG R E K++ E+Y +RS GFG EVK RIM+ Sbjct: 301 THDGVPAYYILASSEASSNLQRYDGIRYGYRAPEAKNLEEVYVKSRSQGFGDEVKRRIML 360 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ LS+ YD+++ +A K+R LI DFT+ F+ D+I+ T ++AF +G E ++ + Sbjct: 361 GTFSLSAGFYDAYFNKAAKVRRLISDDFTKVFKD-YDLIVGATGASTAFKIGAEIDDPKT 419 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M NDV TV VNMAGLPA+S+PA E MP+GLQLIG+PF E+T+++ G + E+ Sbjct: 420 M--YMNDVLTVPVNMAGLPAMSLPAGFSAEDGMPVGLQLIGKPFDEQTIYNTGYVFEQTT 477 Query: 485 GYFR 488 + + Sbjct: 478 DFHK 481 >gi|257092324|ref|YP_003165965.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044848|gb|ACV34036.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 490 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 222/481 (46%), Positives = 304/481 (63%), Gaps = 15/481 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K+IS+VEL Y+ I N Q+NA+I V + A A +D+R+ G+ L GIP Sbjct: 13 LATKEISSVELTRLYLDRISRHNPQLNAFITVDPAISLAQARAADERLARGEGGPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD F +G T S +L F Y++ V + GAV+LGK NMDEFAMGSSNET Sbjct: 73 LAHKDIFCAQGWLTTCGSRMLSNFVSPYDAAVIARFKAAGAVLLGKTNMDEFAMGSSNET 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPA+ G Sbjct: 133 SFYGPVRNPWEL-----NCVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALCNLTG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQAG + R+ D A+LL A+AG+DE D+T + P DY R Sbjct: 188 MKPTYGVVSRYGMIAFASSLDQAGPLARSAADCAVLLNAMAGFDERDSTSLERPTEDYGR 247 Query: 256 AL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + D+ + G+ +G+P E+ D SP + + I+ + GA+ V +SLP + Sbjct: 248 DINTATADKPLAGLRIGLPAEFFGDGGSPEVMQLVDAAIADYRRLGAETVAVSLPSMSLS 307 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + AYY+I+PAEASSNLAR+DGVRYG R + +D+ +MY +R+ GFG EVK R++IGTYV Sbjct: 308 VAAYYVIAPAEASSNLARFDGVRYGHRAPQYRDLDDMYSKSRAQGFGAEVKRRLLIGTYV 367 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS YD++YL+A++IR LI DF AF Q DVI+ PT+P++AF LG++ + M Sbjct: 368 LSHGYYDAYYLQAQRIRRLIASDFAAAFRQ-CDVIIGPTSPSTAFRLGEKAADPVQM--Y 424 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +D++T+AVN+AGLP IS+P +P+GLQLIG F E L ++ + Sbjct: 425 LSDIYTIAVNLAGLPGISIPCGFA-GGLPVGLQLIGNYFDEARLLGTAHRYQQATTWHLQ 483 Query: 490 H 490 H Sbjct: 484 H 484 >gi|320108682|ref|YP_004184272.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Terriglobus saanensis SP1PR4] gi|319927203|gb|ADV84278.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Terriglobus saanensis SP1PR4] Length = 482 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/484 (44%), Positives = 309/484 (63%), Gaps = 14/484 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNS----QMNAYIEVVAQKARAAAEES 59 L + + + LRS + +A L + I+ + ++N+++ + ++A AE+ Sbjct: 3 LKTLTIDVTLAALRSGETTASALAQLHFDKIKTEDQVPGKEINSFLSLAEERAMQQAEKI 62 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D + G+ L G+PIGIKD +G + A S IL + P Y++T +KL GAV+ Sbjct: 63 DGMLKAGENLPVLAGVPIGIKDVLTMQGAPSTAGSKILKNYHPPYDATAVRKLEAAGAVL 122 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLN DEFAMG SNE S YGPV +P R++D PGGSSGGS+AAVA C AS+GT Sbjct: 123 LGKLNCDEFAMGGSNENSAYGPVRNP-RALDRV----PGGSSGGSAAAVAAGFCVASLGT 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G G+ PTYGR SR G+I+FA SLD+ G +TR+VRD+A +L ++G Sbjct: 178 DTGGSVRQPAAFCGVTGLLPTYGRISRYGLIAFASSLDRVGPVTRSVRDTATMLSVLSGP 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D DAT PV DY A + G+ +GIP EY + L P I ++ + LK AG Sbjct: 238 DPMDATASQTPVEDYVAATKAPVAGLKIGIPAEYFGEGLEPEIRAAVERTLDQLKAAGCT 297 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 ISL HT+YA+P YY+++ AEASSNL+R+DGVR+G RV+ K++ E+Y+ +R GFG Sbjct: 298 THPISLAHTKYAVPTYYVLATAEASSNLSRFDGVRFGHRVDHPKNLSELYKESREEGFGP 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++GTY LSS YD++Y +A+++RTL+ RDF AF + VD I+TP TPT + LG Sbjct: 358 EVKRRILLGTYSLSSGYYDAYYRKAQQVRTLLARDFLAAFAE-VDAIVTPITPTPPWKLG 416 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + SM D++TVA ++AG+ ISVP + +P+G+Q++ F+E L V Sbjct: 417 EKTEDPLSM--YLADIYTVAASLAGISGISVPVGETAEHLPIGVQVLAGHFQEAKLLRVA 474 Query: 478 QIIE 481 Q IE Sbjct: 475 QAIE 478 >gi|239928774|ref|ZP_04685727.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces ghanaensis ATCC 14672] gi|291437095|ref|ZP_06576485.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces ghanaensis ATCC 14672] gi|291339990|gb|EFE66946.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces ghanaensis ATCC 14672] Length = 497 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/488 (45%), Positives = 324/488 (66%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ + +E+ +++ S +++AVE+ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDIIRLTAAETAEKIASGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+GI T S +L+G+ P Y++T+T++L V+L Sbjct: 61 EKRARGEKLGPLAGVPLALKDIFTTEGIPTTVGSKMLEGWIPPYDATLTRRLKAADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+ G+ VG+ K++R + + + + + + L+ GA+ Sbjct: 236 PLDSTSIDEPVPPVVEAARNGSVAGLRVGVVKQFRGEGYQAGVIQRFDESVELLEGLGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+DG+RYGLR G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDGLRYGLRT-GDDGAHSAEEVTSLTREAG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS YD++Y A+K+RTLIK+DF +AFEQ VDVI++PTTPT+AF Sbjct: 355 FGDEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLIKQDFDKAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 414 PIGERADD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPVMKDDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|255038207|ref|YP_003088828.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dyadobacter fermentans DSM 18053] gi|254950963|gb|ACT95663.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dyadobacter fermentans DSM 18053] Length = 481 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 195/476 (40%), Positives = 301/476 (63%), Gaps = 10/476 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++ ++E + LR + ++ V+LVD Y++ IE +N +NA++EV ++A+ AA D +I N Sbjct: 4 YLTLTEIQRDLREEGLTCVKLVDHYLEKIE-ANKHLNAFVEVYTEEAKKAALAVDAKIAN 62 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L G+ IG+KD + G QA S IL + Y +T Q+L D A+++G+ N D Sbjct: 63 GTAGKLAGMVIGLKDVLSLTGHGLQAGSQILQNYTAPYTATAVQRLLDEDAIIIGRQNCD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S +GPV++ + PGGSSGGS+ AV LC AS+G+DTGGS+R Sbjct: 123 EFAMGSSNENSSFGPVLNAINNAK-----VPGGSSGGSAVAVQAGLCHASLGSDTGGSVR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G +G+KP+YGR SR G+I++A S D G IT++V D+A+LL+ ++G D+ D+T Sbjct: 178 QPAAFCGVIGVKPSYGRISRYGLIAYASSFDCIGPITKSVADAALLLEVMSGADDFDSTV 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PVP Y L+ + I + ++P I + + + L+ G ++ I +P Sbjct: 238 SERPVPAYTAGLEWKGKAKIGYIRSAVENEAIAPEIRRQTSEVLDRLRAEGHEVTAIDMP 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 LP YYI++ AEASSNL+R+DGVRYG R E D+ MY+ TR+ GFG EV+ RI+ Sbjct: 298 LLDSLLPTYYILTTAEASSNLSRFDGVRYGYRSPESVDLESMYKKTRTEGFGDEVRRRIL 357 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+VLS+ YD++Y +A+++R L++ + FEQ D +++P TPT+AF LG++ + Sbjct: 358 LGTFVLSANYYDAYYTKAQRVRRLVREETNRFFEQ-FDFLISPVTPTTAFTLGEKTEDPL 416 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 M D+FTV N+ G PA+S+P L ++ MP+G+Q++ F EE + + + Sbjct: 417 QM--YLADIFTVQANVVGNPAVSIPNGLDDQGMPIGIQIMAPYFGEEKMLAFANYL 470 >gi|86606088|ref|YP_474851.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Synechococcus sp. JA-3-3Ab] gi|109891992|sp|Q2JUM6|GATA_SYNJA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|86554630|gb|ABC99588.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Synechococcus sp. JA-3-3Ab] Length = 509 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 301/475 (63%), Gaps = 11/475 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 +L +K+ SA E+ Y++ + Q+ ++I V + A A+ D RI G+ L G Sbjct: 10 QLVTKERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQAKAVDARIRAGEEIGPLAG 69 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ +KD T+GI T S +L+GF P YESTVT +L G V +GK N+DEFAMGSS Sbjct: 70 IPLAVKDNLCTQGIRTTCASRMLEGFIPPYESTVTARLAAAGMVTVGKTNLDEFAMGSST 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S + +PW D T PGGSSGGS+AAVA ++G+DTGGSIRQPA+F G Sbjct: 130 ENSAFQRTANPW---DLTR--VPGGSSGGSAAAVAADQAVVALGSDTGGSIRQPAAFCGV 184 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+++FA SLDQ G RTV D A+LL+ IAG+D D+T + + +PDY Sbjct: 185 VGLKPTYGLVSRYGLVAFASSLDQVGPFGRTVEDVALLLQGIAGHDPLDSTSLKVEIPDY 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +AL I+G +G+ ++ + Q I L++ GA+I+EI P +Y L Sbjct: 245 SQALIPEIKGFKIGVIRDLLGEGCGEETRAAVQAAIQHLEELGAEILEIDCPSFRYGLAT 304 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YYII+P+EASSNLARYDGV+YGLR +L MY TR+ GFG EVK RIMIGTY LS+ Sbjct: 305 YYIIAPSEASSNLARYDGVKYGLREPADSLLAMYGKTRARGFGPEVKRRIMIGTYALSAG 364 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+K+RTLIK+DF AFE+ VDV+++PTTPT AF G+ E+ + D+ Sbjct: 365 YYDAYYLKAQKVRTLIKQDFLRAFEK-VDVLVSPTTPTPAFKAGERED---PLSMYLCDL 420 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T+ VN+AGLP +S+P +P+GLQ+IG +E + V E+ + + Sbjct: 421 MTIPVNLAGLPGLSLPCGFA-NGLPIGLQIIGNVLQESKVLRVAYAYEQSTDWHK 474 >gi|239982454|ref|ZP_04704978.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces albus J1074] gi|291454301|ref|ZP_06593691.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces albus J1074] gi|291357250|gb|EFE84152.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces albus J1074] Length = 498 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 315/482 (65%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIIN 65 + +E+ ++ S +++AVE+ ++++ IE + +++A++ V + A A A D KR Sbjct: 8 LTAAETAAKIASGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDAKRAAG 67 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P+ +KD F T+GI T S IL+G+ P Y++TVT++L D V+LGK NMD Sbjct: 68 EKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATVTKRLKDADVVILGKTNMD 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTDTGGSIR Sbjct: 128 EFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALAAFEAPLAIGTDTGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L +AIAG+D D+T Sbjct: 183 QPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIAGHDPLDSTS 242 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S+ GM VG+ K++R + + + + + + L+ GA +VE+ Sbjct: 243 IDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLRKLGATVVELDC 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVK 360 P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E TR GFG EVK Sbjct: 303 PSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEEVTAITREEGFGDEVK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+++GTY LSS YD++Y A+K+RTLI RDF AFE+ VDVI++PTTPT+AFP+G+ Sbjct: 362 RRVILGTYALSSGYYDAYYGSAQKVRTLITRDFERAFEE-VDVIVSPTTPTTAFPIGERA 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 421 DD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLYKVGAA 478 Query: 480 IE 481 +E Sbjct: 479 VE 480 >gi|29829287|ref|NP_823921.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces avermitilis MA-4680] gi|39931488|sp|Q82JL0|GATA_STRAW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|29606394|dbj|BAC70456.1| putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptomyces avermitilis MA-4680] Length = 501 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/482 (45%), Positives = 318/482 (65%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E ++ S +++AV++ ++++ I+ + +++A++ V + A A A D++ G Sbjct: 11 LTAAEIAAKVASGELTAVQVTEAHLARIDAVDEKVHAFLHVDREGALAQARAVDEKRERG 70 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD F T+GI T S IL+G+ P Y++T+T+KL V+LGK NMD Sbjct: 71 EKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATLTKKLKAADVVILGKTNMD 130 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW PGGS GGSSAA+A F +IGTDTGGSIR Sbjct: 131 EFAMGSSTENSAYGPTGNPWDL-----SRIPGGSGGGSSAALASFEAPLAIGTDTGGSIR 185 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T Sbjct: 186 QPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTS 245 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S++GM VG+ K++R + + + + + ++ LK+ GA+IVE+ Sbjct: 246 IDAPVPPVVEAARNGSVEGMRVGVVKQFRGEGYQAGVLQRFDESVALLKELGAEIVELDC 305 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVK 360 P AL AYY+I+P+E SSNLAR+DG+RYG+RV G D E TR GFG EVK Sbjct: 306 PSFDLALSAYYLIAPSECSSNLARFDGLRYGVRV-GDDGTRSAEEVTALTREAGFGDEVK 364 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y A+K+RTLI RDF ++FEQ VDVI++PTTPT+AFP+G+ Sbjct: 365 RRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFEKSFEQ-VDVIVSPTTPTTAFPIGERA 423 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 424 DD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPALKDDRLYKVGAA 481 Query: 480 IE 481 +E Sbjct: 482 VE 483 >gi|296161381|ref|ZP_06844188.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia sp. Ch1-1] gi|295888367|gb|EFG68178.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia sp. Ch1-1] Length = 495 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 225/494 (45%), Positives = 316/494 (63%), Gaps = 22/494 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ IE +NS +NA+I+V A A +D + G Sbjct: 5 SLTELRAALTAKECSAVELAQLYLKRIEAANS-LNAFIQVDPDLTLAQARAADALLHTGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F TKG + A S +L + +++TV +L + G V +GK NMDEF Sbjct: 64 AGPLVGLPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVARLQNAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+GPV +PW K PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGPVQNPWDV-----KAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+T + Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCAMLLDAMAGFDERDSTSLV 238 Query: 248 LPVPDYERALDQ---------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DY R L Q + G+ +G+PKEY L+ + + + + GA Sbjct: 239 RDDEDYTRYLGQPWKEDGAGKPLAGLRIGLPKEYFGAGLADDVRASIDAALKQYEVLGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +V++SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG Sbjct: 299 LVDVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGP 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF+Q DVI+ P PT A+ LG Sbjct: 359 EVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKQ-CDVIMGPVAPTVAWDLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLF 474 + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 AKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARML 475 Query: 475 SVGQIIEKEAGYFR 488 V ++ + R Sbjct: 476 QVADAFQRATDWHR 489 >gi|256380027|ref|YP_003103687.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinosynnema mirum DSM 43827] gi|255924330|gb|ACU39841.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinosynnema mirum DSM 43827] Length = 506 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/492 (44%), Positives = 316/492 (64%), Gaps = 20/492 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++ ++ S+++SAVE+ +++ I+ + ++A++ V + A AAA D Sbjct: 1 MNDLTRSTAADLAAKIASREVSAVEVAQAHLDRIDAVDGAVHAFLHVDREGALAAARRVD 60 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + G+A L G+P+ +KD F T+G+ T S +L+G+RP Y++TVT++L + G V+ Sbjct: 61 EAVAAGEAPASPLAGVPLALKDVFTTEGVPTTVGSKMLEGWRPPYDATVTRRLKEAGVVV 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YGP +PW D+ PGGS GGSSAA+A F +IGT Sbjct: 121 LGKTNMDEFAMGSSTENSAYGPTRNPW----DLDRI-PGGSGGGSSAALAAFEAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQP S TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+ Sbjct: 176 DTGGSIRQPGSVTGTVGVKPTYGSVSRYGLVAFSSSLDQGGPCARTVLDAALLHEVIAGH 235 Query: 239 DECDATCVN----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T +N V L + G+ VG+ ++ D P + ++++ ++ LK Sbjct: 236 DPLDSTSINAPVPPVVAAAREGLSGDLTGVRVGVVTQFSGDGYQPGVLRSFEAAVAQLKQ 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA+IVE+S P YALPAYY+I+P+EASSNLAR+D +RYGLRV G D E+ T Sbjct: 296 LGAEIVEVSCPSFDYALPAYYLIAPSEASSNLARFDAMRYGLRV-GDDGTRSAEEVMSMT 354 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RIMIGTY LSS YD++Y A+K+RTLI RDF A+ VDV+++PTTP Sbjct: 355 REAGFGAEVKRRIMIGTYALSSGYYDAYYGSAQKVRTLITRDFEAAYAT-VDVLVSPTTP 413 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFR 469 T+AF +G E M D+ T+ N+AG A+SVP+ L E+ +P+GLQ++ + Sbjct: 414 TTAFKIG--ERTGDPMAMYKADLCTIPANLAGNAALSVPSGLSEEDGLPVGLQIMAPALQ 471 Query: 470 EETLFSVGQIIE 481 + ++ V E Sbjct: 472 DHRMYRVAAAYE 483 >gi|195953825|ref|YP_002122115.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hydrogenobaculum sp. Y04AAS1] gi|195933437|gb|ACG58137.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hydrogenobaculum sp. Y04AAS1] Length = 477 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 212/482 (43%), Positives = 308/482 (63%), Gaps = 13/482 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M S L K I E+++S+ + E + A++ + +A A+ D + G Sbjct: 1 MLYKNSVSWLLEKKIKPSEILESFKKRKEAFEPTIKAFVTDLYDQAYETAKALDNQTPKG 60 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPI IKD G T S +L + Y++TV ++L GA+++GK NMDE Sbjct: 61 K---LFGIPIAIKDNINVDGFPTTCSSRMLQNYISVYDATVIKRLKQEGAIIVGKTNMDE 117 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW ++ PGGSSGGS+++V + S+G+DTGGSIRQ Sbjct: 118 FAMGSSTEYSAFFQTKNPWNI-----EYVPGGSSGGSASSVGASMVPLSLGSDTGGSIRQ 172 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G +G+KPTYGR SR G+++FA SLDQ G R +D A+LL+ I+GYD D+T V Sbjct: 173 PASFCGVIGLKPTYGRVSRYGLVAFASSLDQIGPFGRYTKDVALLLEVISGYDPKDSTSV 232 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+ VP + + L + + VGIPKE+ + ++++++ + +L++ A I EISLPH Sbjct: 233 NVEVPSFSKNLKPRTE-LRVGIPKEFMAYKIGKEVEESFKNFVKFLEENKATIKEISLPH 291 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 +YA+P YYII+PAEASSNLAR+DGVRYG R + +D+ E+Y TR GFG EVK RIM+ Sbjct: 292 IEYAIPVYYIIAPAEASSNLARFDGVRYGYRAKDFQDLFELYAKTRDEGFGPEVKRRIML 351 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLSS Y+++Y +A ++ LIKR+F EA + VDVIL+PT+PT F G++ N+ S Sbjct: 352 GTYVLSSGYYEAYYGKAIAVKNLIKREFQEAL-KDVDVILSPTSPTPPFKFGEKLNDPIS 410 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D+FTV+VN+A LPAIS+P+ + +P+G+Q+IG+ F E+TL V E+ Sbjct: 411 M--YLSDIFTVSVNLAELPAISIPSGFTKDGLPIGVQIIGRAFDEQTLLDVSYAWEQHFH 468 Query: 486 YF 487 ++ Sbjct: 469 HY 470 >gi|239944480|ref|ZP_04696417.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces roseosporus NRRL 15998] gi|239990939|ref|ZP_04711603.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces roseosporus NRRL 11379] gi|291447946|ref|ZP_06587336.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces roseosporus NRRL 15998] gi|291350893|gb|EFE77797.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces roseosporus NRRL 15998] Length = 500 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 223/487 (45%), Positives = 320/487 (65%), Gaps = 14/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S + + +E ++ S +++AVE+ ++++ I+ + +++A++ + + A A A D Sbjct: 4 ISTIIKLTAAEIAGKIASGELTAVEVTEAHLARIDAVDEKVHAFLHIDREGALAQARAVD 63 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR L G+P+ +KD F TK + T S IL+G+ P Y++T+TQKL D V+L Sbjct: 64 AKREAGEKLGPLAGVPLALKDIFTTKDMPTTVGSKILEGWVPPYDATLTQKLRDADVVIL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A + +IGTD Sbjct: 124 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASYEAPLAIGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L +AIAG+D Sbjct: 179 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIAGHD 238 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+QGM VG+ K++R + + + + + + LK GA Sbjct: 239 PLDSTSIDAPVPPVVEAARNGSVQGMRVGVVKQFRGEGYQAGVLQRFDESVELLKSLGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGF 355 IVE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV +G K E+ TR GF Sbjct: 299 IVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRVGDDGTKSAEEVTALTREAGF 358 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LSS YD++Y A+K+RTLI +DF +AFEQ VDVI++PTTPT+AFP Sbjct: 359 GDEVKRRIILGTYALSSGYYDAYYGSAQKVRTLITQDFEKAFEQ-VDVIVSPTTPTTAFP 417 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ Sbjct: 418 IGERADD--PMAMYLADLCTIPTNLAGNSAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLY 475 Query: 475 SVGQIIE 481 VG +E Sbjct: 476 KVGSAVE 482 >gi|302865769|ref|YP_003834406.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Micromonospora aurantiaca ATCC 27029] gi|302568628|gb|ADL44830.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Micromonospora aurantiaca ATCC 27029] Length = 491 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 221/497 (44%), Positives = 312/497 (62%), Gaps = 17/497 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L ++ E + S + SAVE+ +++ I + +++A++ V + A AAA D Sbjct: 1 MSDLTKLSAVEIAGLVASGETSAVEVTRAHLDRIGAVDDRVHAFLHVDTEGALAAARVVD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G + L G+P+ +KD TKG+ T S IL+G+RP Y+ST+ ++L D G VML Sbjct: 61 ERRAAGAELGPLAGVPVAVKDVLTTKGVPTTVGSKILEGWRPPYDSTIVERLRDAGTVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW TD+ PGGS GGS+AA+A + SIG+D Sbjct: 121 GKTNMDEFAMGSSTEYSAYGPTRNPW----DTDRI-PGGSGGGSAAALAAYEAPLSIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G+++F+ SLD G RTV D+A+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGAKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHQVIGGHD 235 Query: 240 ECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + +PVPD A + G+ +G+ E+ + P + ++ L Sbjct: 236 PRDSTSIPVPVPDVVAAARLGATGDLTGVKLGVVTEFTGEGAEPGVMAAFRDAAEALAKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRS 352 GA+IVE+S P+ +YALPAYY+I+P+E SSNLAR+DGVR+GLRV + + E+ TR Sbjct: 296 GAEIVEVSCPNFKYALPAYYLIAPSECSSNLARFDGVRFGLRVGDDGNRSLEEVMSLTRE 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIM+GTY LSS YD++Y +A+K+RTLI RDFT AFEQ VD +++PTTP Sbjct: 356 AGFGPEVKRRIMLGTYALSSGYYDAYYGQAQKVRTLITRDFTSAFEQ-VDALISPTTPFV 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AFP+G + M D+FT+ N+ G PAISVP L + +P+G Q++ ++ Sbjct: 415 AFPIGSRTADPYQM--YLADLFTIPTNLYGGPAISVPCGLSD-GLPVGFQIMAPTMADDR 471 Query: 473 LFSVGQIIEKEAGYFRP 489 ++ V +E G P Sbjct: 472 MYRVAAALENAVGTLTP 488 >gi|317121149|ref|YP_004101152.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermaerobacter marianensis DSM 12885] gi|315591129|gb|ADU50425.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermaerobacter marianensis DSM 12885] Length = 488 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 224/483 (46%), Positives = 305/483 (63%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA-EES 59 M EL F RL + +ISA EL +++ I+ + + AY+ V A+ A A A EE Sbjct: 1 MEELWFEPAHRLARRLEAGEISARELARAFLDRIQELDGTVGAYLTVTAELALAQAREED 60 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 DKR L GIP+ IKD +G+ T A S +L G+RP Y +T ++L GAV+L Sbjct: 61 DKRRRGEPVGPLSGIPVAIKDNLCIQGVPTTAASKLLAGYRPPYTATAVERLRKAGAVVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S + +PW + PGGSSGGS+AAVA AA++G+D Sbjct: 121 GKTNMDEFAMGSSTENSAFRITRNPW-----DPQRVPGGSSGGSAAAVAAGEAAAALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G +TR V D+A+L++AIAG+D Sbjct: 176 TGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPLTRDVTDAALLMEAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT +PVP + AL + G+ +G+P+E+ + + P + + + L GA Sbjct: 236 PADATSAPVPVPSWRDALTGEVAGVRIGLPREFYGEAVEPEVAGAVRAAVERLVADGAVA 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E SLP ++ALPAYY+I+ AEASSNLARYDGVRYG R + ++ +MY TR FG EV Sbjct: 296 DETSLPSAEHALPAYYLIATAEASSNLARYDGVRYGYRADAGNLADMYLETRK-NFGPEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GT+ L YD++Y +A ++R LIK DF F DV++TPT+P AFPLG Sbjct: 355 KRRILLGTFALREGYYDAYYRKALQVRRLIKDDFDRLFAT-FDVLITPTSPVVAFPLGAR 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + +M D+ T+ VN+AGLPA+SVP +P+GLQ+IG+PF E+ + V Sbjct: 414 TADPLAM--YAADICTLPVNLAGLPAVSVPCGFA-GGLPVGLQIIGRPFAEDMVLRVAYA 470 Query: 480 IEK 482 IE+ Sbjct: 471 IEQ 473 >gi|324999189|ref|ZP_08120301.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudonocardia sp. P1] Length = 499 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/488 (44%), Positives = 311/488 (63%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L M +E ++ S+++SAVE +++ I + ++A++ V A+ A A+A D Sbjct: 1 MSDLVRMTAAELAGKIHSREVSAVEAAQAHLDRIAAVDDGVHAFLHVGAESALASAGRVD 60 Query: 61 KRIING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + +G L G+P+ +KD F T + T S IL+G++P Y++TVT++L G + Sbjct: 61 AALADGAVPVSPLAGVPLALKDVFTTSDMPTTCGSKILEGWQPPYDATVTERLRAAGITI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YG +PW + PGGS GGS+AA+A + +IGT Sbjct: 121 LGKTNMDEFAMGSSTEHSAYGVTRNPWDT-----SRVPGGSGGGSAAALAAYEAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+FTGTVG+KPTYG+ SR G+++ A SLDQ G RTV D+A+L + I G+ Sbjct: 176 DTGGSIRQPAAFTGTVGVKPTYGQVSRYGLVACASSLDQGGPCARTVLDAALLHEVIGGH 235 Query: 239 DECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T ++ PVPD A Q + G+ VG+ +E + P + + + L+ Sbjct: 236 DPRDSTSIDRPVPDVVAAARQGATGDLSGLKVGVVRELGGEGYQPGVRAAYDASLRRLEK 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSI 353 GA++VE+S PH +Y + AYY+I P+E SSNLAR+D +RYGLR EG+ E+ NTR Sbjct: 296 LGAELVEVSCPHFEYGMAAYYLILPSEVSSNLARFDAMRYGLRAAEGRSAEEVMANTREQ 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LSS YD++Y +A+K+RTLI RDF AFEQ DV+++PTTPT Sbjct: 356 GFGPEVKRRIMLGTYALSSGYYDAYYGQAQKVRTLISRDFAAAFEQ-ADVLVSPTTPTVP 414 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 FP+G + ++ +M ND+ T+ N+AG+ +SVP+ L E +P GLQ++ E + Sbjct: 415 FPIGDKVDDPLAM--YLNDLATIPTNLAGVAGMSVPSGLSE-GLPTGLQVMAPALGEAVM 471 Query: 474 FSVGQIIE 481 + VG E Sbjct: 472 YRVGAAFE 479 >gi|15672145|ref|NP_266319.1| Glu-tRNA amidotransferase subunit A [Lactococcus lactis subsp. lactis Il1403] gi|13878510|sp|Q9CJ43|GATA_LACLA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|12723014|gb|AAK04261.1|AE006254_2 Glu-tRNA amidotransferase subunit A [Lactococcus lactis subsp. lactis Il1403] Length = 486 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 214/485 (44%), Positives = 308/485 (63%), Gaps = 11/485 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N ++ E + L +K+ISA+EL + + I Q++A++++ +KA A D R I Sbjct: 4 NNKSIKELHELLVNKEISALELTKATLSDISAREPQIDAFLKITEEKALQDAAAIDARGI 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D +GI I +KD T+GI T A S IL G+ P Y +TV KL ++G + +GKLNM Sbjct: 64 NPDVV-TDGISIAVKDNIVTEGIETTAASKILGGWIPPYNATVANKLSESGLITIGKLNM 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG S E S P + W D T PGGSS GS+A+VA S+G+DTGGSI Sbjct: 123 DEFAMGGSGENSSVKPTKNAW---DQTK--VPGGSSSGSAASVASGQVRLSLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYGR SR G+I+FA SLDQ G + TV ++A LL I+G+D+ D+T Sbjct: 178 RQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLAPTVEENAQLLNVISGFDKNDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ + Q I+GM + +PKEY + + + + L+ GA + E+SL Sbjct: 238 SSNVAVPDFTSKIGQDIKGMKIALPKEYFGEGIDEKVKEQILAAAKHLEKLGAIVEEVSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 PH++Y + YYII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EV+ RI Sbjct: 298 PHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDIKNLEDLYVKSRSEGFGPEVQRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LS+ YD H+ +A ++RTLI DF + FE+ D+IL PTTPT A+ LG ++ Sbjct: 358 MLGTFSLSAGSYDKHFKKAGQVRTLIINDFAKVFEK-YDLILGPTTPTPAWDLGARVDDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM D+ T+ VN+AGLP IS+PA + +P+G+QLIG+ + EET++ V E Sbjct: 417 LSM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGMQLIGKRYDEETIYKVAAAFEAT 473 Query: 484 AGYFR 488 + + Sbjct: 474 TDFHK 478 >gi|21223855|ref|NP_629634.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces coelicolor A3(2)] gi|256785049|ref|ZP_05523480.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces lividans TK24] gi|289768942|ref|ZP_06528320.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces lividans TK24] gi|6225417|sp|Q9Z580|GATA_STRCO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|4467250|emb|CAB37575.1| probable Glu-tRNA Gln amidotransferase subunit [Streptomyces coelicolor A3(2)] gi|289699141|gb|EFD66570.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces lividans TK24] Length = 497 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 223/488 (45%), Positives = 320/488 (65%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + +E ++ S +++AV++ ++++ IE + +++A++ V + A A A D Sbjct: 1 MSDIIKLTAAEIAAKIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+GI T S IL+G+ P Y++TVT++L V+L Sbjct: 61 EKRERGEKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATVTKRLKAADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTK--IPGGSGGGSSAALAAFQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPASVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+ GM VG+ K++R + + + + + + LK GA+ Sbjct: 236 PMDSTSIDAPVPAVVEAARNGSVDGMRVGVVKQFRGEGYQAGVVQRFDESVELLKSLGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+DG+RYG RV G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDGLRYGARV-GDDGTHSAEEVTSLTREAG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS YD++Y A+K+RTLIK++F AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLIKQEFERAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 414 AIGERADD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPAMKDDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|94991084|ref|YP_599184.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS10270] gi|166217718|sp|Q1JFB9|GATA_STRPD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|94544592|gb|ABF34640.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus pyogenes MGAS10270] Length = 488 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 292/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKG T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGTLTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFET 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|295110403|emb|CBL24356.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ruminococcus obeum A2-162] Length = 491 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 205/488 (42%), Positives = 300/488 (61%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL M E +++ + I V+ V + IE+ ++AY+++ ++A A A+E +K Sbjct: 2 ELETMTALELAAKIKQRQIHVVDGVKAVFDQIESKEGTVHAYLDLYKKEAYARAKEVEKG 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G L G+PI IKD KG T S IL+ F P Y + V +L G +++GK Sbjct: 62 IADGTYTGPLAGVPIAIKDNICIKGKKTTCASRILENFVPQYNAEVIDRLEKAGMIIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ ETS YG +PW + + PGGSSGGS AAVA ++G+DTG Sbjct: 122 TNMDEFAMGSTTETSAYGVTRNPWNT-----EHVPGGSSGGSCAAVAAGETFMALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP+SF G GIKPTYG SR G++++A SLDQ G + + V D A LL+ IAG+D Sbjct: 177 GSIRQPSSFCGVTGIKPTYGTVSRYGLVAYASSLDQIGPVGKNVADCAALLEVIAGHDPK 236 Query: 242 DATCVNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T ++ D+ ++L D+ + GM G+PKE+ L P + ++ + L + GA + Sbjct: 237 DSTSLDRQDLDFSKSLEDKKLLGMKFGVPKEFLAKGLEPEVKDSFMNVLKTLTEQGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 S+ +Y +PAYYII+ AEASSNL R+DGV+YG R E + + +MY+ TR+ FG+EV Sbjct: 297 FFSVETMEYMIPAYYIIASAEASSNLERFDGVKYGYRAAEYEGLHDMYKKTRTEAFGEEV 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G++VLSS YD++YL+A + + LIK++F +AFE+ DVIL P P +A +G Sbjct: 357 KRRIMLGSFVLSSGYYDAYYLKALRTKALIKKEFDQAFEK-YDVILAPAAPYTAPKIG-- 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E+ + D++TVAVN+ GLP I+VP + + MP+G+Q+IG F E+ + Sbjct: 414 ESLKDPLAMYLGDIYTVAVNLCGLPGITVPCGMDKAGMPIGIQMIGDCFAEKKILRAAAA 473 Query: 480 IEKEAGYF 487 E G F Sbjct: 474 YEAVRGAF 481 >gi|291546777|emb|CBL19885.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ruminococcus sp. SR1/5] Length = 490 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/476 (42%), Positives = 295/476 (61%), Gaps = 10/476 (2%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLE 72 ++++ IS ++ V IE +++AY++ ++A A A+E K I +G L Sbjct: 13 EKIKQHQISVLDGVKYVFNQIEAKEDKVHAYLDTYKKEAYARAKEVQKGIEDGTYTGPLA 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD KG T S IL+ F P Y + V +L G V++GK NMDEFAMGS+ Sbjct: 73 GVPIAIKDNICIKGKTTTCASKILENFVPQYNAEVIDRLEQAGLVIIGKTNMDEFAMGST 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETS YG +PW + PGGSSGGS AAVA ++G+DTGGSIRQP+S+ G Sbjct: 133 TETSAYGVTRNPWDL-----EHVPGGSSGGSCAAVAAGETYLALGSDTGGSIRQPSSYCG 187 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 GIKPTYG SR G++++A SLDQ G + + V D A LL+ IAG+D D+T + D Sbjct: 188 VTGIKPTYGTVSRYGLVAYASSLDQIGPVGKDVADCAALLEIIAGHDAKDSTSMKRENLD 247 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++ I GM G+PKEY + L+P + + + + L + GA + S+ T+Y +P Sbjct: 248 FSASMTDKIVGMKFGVPKEYLSEGLNPEVKEAFMNTLKSLTEMGAVVEFFSMKTTEYMIP 307 Query: 313 AYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII+ AEASSNL R+DGV+YG R E + + +MY+ TR+ GFG+EVK RIM+G++VLS Sbjct: 308 AYYIIASAEASSNLERFDGVKYGFRAKEYEGLHDMYKKTRTEGFGEEVKRRIMLGSFVLS 367 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++YL+A + + LIK++F +AF + DV+L P +P +A LG+ + +M Sbjct: 368 SGYYDAYYLKALRTKALIKKEFDQAFSK-YDVLLAPASPFTAPKLGESLKDPLAM--YLG 424 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 D++TVAVN+ GLP I+VP +P+G+Q+IG F+E LF EK+ G F Sbjct: 425 DIYTVAVNLCGLPGITVPCGKDAAGLPIGIQMIGDCFKENNLFRAAHAYEKKRGDF 480 >gi|124265278|ref|YP_001019282.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methylibium petroleiphilum PM1] gi|124258053|gb|ABM93047.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methylibium petroleiphilum PM1] Length = 496 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 212/492 (43%), Positives = 304/492 (61%), Gaps = 21/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+ + V++ RL +K +S E V S++ A ++ + A++ + A A +D+ Sbjct: 3 TELHQLGVADLSARLAAKTVSTAE-VTSHLLARVAAHEHLGAFLCTDVELALQQARAADE 61 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+ L+G+P+ KD F T + A S +L G+R +++TV KL G V LG Sbjct: 62 RRARGETLGALDGVPLAHKDIFVTTDFPSTAASKMLAGYRSPFDATVVAKLKAAGTVTLG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN DEFAMG SNE S PV +PW + + PGGSSGGS+ AVA L A+ GTDT Sbjct: 122 KLNCDEFAMGGSNENSAIRPVRNPWDA-----ERIPGGSSGGSAVAVAARLVPATTGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPAS +G GIKPTYGRCSR G+I+FA SLDQAG I ++ D A+LL A++G+DE Sbjct: 177 GGSVRQPASLSGVTGIKPTYGRCSRYGMIAFASSLDQAGPIAKSAEDCALLLGAMSGFDE 236 Query: 241 CDATCVNLPVPDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 DAT PVPD+ L + + G+ +G+P+E+ ++ + + + ++ Sbjct: 237 RDATSAQQPVPDFAALLRAPRDGASAGRPLHGLRIGLPREFFGAGVAGDVTQAVRAALAE 296 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENT 350 ++ GA +V++SLP T+ ++P YYII+PAEASSNL R+DGVRYG R + D+L+MY + Sbjct: 297 VEKLGATLVDVSLPRTELSIPVYYIIAPAEASSNLGRFDGVRYGHRAAQYGDLLDMYRKS 356 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 RS GFG EVK RIMIGTYVLS YD++YL+A+K+R +I DF AF D+I P P Sbjct: 357 RSEGFGAEVKRRIMIGTYVLSHGYYDAYYLQAQKLRRMIADDFQAAFAH-CDLIAGPVAP 415 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T A LG + + + D+FT+ ++AGLP +S PA E +P+GLQLIG ++E Sbjct: 416 TVARRLGSQTD---PVAEYLADIFTLPASLAGLPGMSAPAGFGEGGLPVGLQLIGNYWQE 472 Query: 471 ETLFSVGQIIEK 482 L ++ Sbjct: 473 AQLLHAAHSFQQ 484 >gi|126649597|ref|ZP_01721838.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. B14905] gi|126593922|gb|EAZ87845.1| glutamyl-tRNA amidotransferase subunit A [Bacillus sp. B14905] Length = 487 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/488 (44%), Positives = 314/488 (64%), Gaps = 13/488 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + E + +++ ++ +L + I + + A++ +KA A E DK + Sbjct: 7 SAKELQAEIKAGNLLIADLTKEAYERIAKLDGDVQAFLASNEEKATVQAAEMDKVPFE-E 65 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T+G+ T S IL+GF P Y++TV KL + G + +GKLNMDEF Sbjct: 66 RGPLFGLPIGVKDNIVTEGLETTCASKILEGFMPIYDATVVNKLREAGMITVGKLNMDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SYY +PW PGGSSG S+A+VA S+G+DTGGSIRQP Sbjct: 126 AMGSSNENSYYKTTKNPWNL-----NHVPGGSSGASAASVAAGEVPFSLGSDTGGSIRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITR V D+A+LL+AIAG D D+T + Sbjct: 181 AAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNALLLEAIAGLDPNDSTSAD 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + VP+Y AL I+G+ + +PKE+ + + ++ + + LK GA + E+SLPH+ Sbjct: 241 VEVPNYAAALTGDIKGLRIAVPKEFLGEGVGEAARQSVLEALEVLKGLGATVEEVSLPHS 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL AYYI+S +EASSNL+R+DG+RYG R + +++++Y+ TR+ GFG EVK RIM+G Sbjct: 301 KYALAAYYILSSSEASSNLSRFDGIRYGFRADNVTNLMDLYKETRAQGFGDEVKRRIMLG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++Y +A++ RTLIK D+ + FE DVI+ PT+PT AF +G EN M Sbjct: 361 TYSLSAGTYDAYYKKAQQARTLIKADYDKVFED-FDVIIGPTSPTPAFKIG--ENVDDPM 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ND+ T+ +N+AG+PAIS+P L + +PLGLQ+IG+ F E T++ V E+ + Sbjct: 418 TMYANDILTIPMNLAGVPAISIPCGL-DNGLPLGLQIIGKYFDEATIYRVAHAFEQATEF 476 Query: 487 FR--PHKW 492 + P W Sbjct: 477 HKQVPQMW 484 >gi|71911320|ref|YP_282870.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS5005] gi|71854102|gb|AAZ52125.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus pyogenes MGAS5005] Length = 488 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL + ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQATLEDIKSREEAVGSFITVSEEVALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TK I T A S +L + P + +T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKEILTTAASKMLYNYEPIFNATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLASVKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|291288328|ref|YP_003505144.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885488|gb|ADD69188.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Denitrovibrio acetiphilus DSM 12809] Length = 486 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 213/482 (44%), Positives = 305/482 (63%), Gaps = 11/482 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS LN + E D L KD S+ ELV Y+ I+ +S++ A+ + + A AE D Sbjct: 1 MSFLN-KNLKELTDGLAGKDFSSKELVQFYLDRIKKYDSEIQAF-NYINENALKQAEAID 58 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + G+ G+P+ +KD TK + T S L+GF+P + T L + G + L Sbjct: 59 AKRLKGETLPAYAGVPVALKDLLITKDMPTTCSSKFLEGFKPPFNGTAVSLLEEAGFINL 118 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL+MDEFAMGSSNE + + +PW D+T PGGSSGGS+A+VA L ++G+D Sbjct: 119 GKLSMDEFAMGSSNENAAFKKTRNPW---DTTK--VPGGSSGGSAASVAAGLAPVTLGSD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS G VG+KPTYGR SR G+++FA SLDQ G + ++ D A +L I +D Sbjct: 174 TGGSIRQPASLCGVVGMKPTYGRVSRFGLVAFASSLDQIGPMGKSAFDLASILSVIGKHD 233 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T N+ DY + L ++GM +GIPKEY + L+P + I D G ++ Sbjct: 234 SKDSTSANVDQKDYTKDLTDDVRGMKIGIPKEYFAEGLAPDVKSAVADAIKKYTDLGCEM 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V+ISLPHT YAL YYII+ AEASSNL RYDGVR+G R E ++ +MY N+R+ GFG+EV Sbjct: 294 VDISLPHTDYALATYYIIATAEASSNLGRYDGVRFGRRAEADNLRDMYFNSRTEGFGEEV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTYVLS+ YD++YL+A+++RTLIK+DF EAF+ VD I+ PT+PT+AF G + Sbjct: 354 KRRIMLGTYVLSAGYYDAYYLKAQRVRTLIKQDFVEAFKT-VDAIICPTSPTTAFKAGAK 412 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + M +D++T+++N+ G +S+P + MP+G+QL+G F E + ++ Sbjct: 413 TEDPLQM--YLSDIYTLSLNLFGGCGLSLPCGFDKDGMPIGVQLMGNYFEEGKILNLAHA 470 Query: 480 IE 481 E Sbjct: 471 FE 472 >gi|260548909|ref|ZP_05823131.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter sp. RUH2624] gi|260408077|gb|EEX01548.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter sp. RUH2624] Length = 492 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 222/479 (46%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + + +Y+ V ++A A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPLVKSYVTVTPEQALAEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S ILD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKILDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNGTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPTDLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|54297650|ref|YP_124019.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella pneumophila str. Paris] gi|81601798|sp|Q5X4H5|GATA_LEGPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|53751435|emb|CAH12853.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella pneumophila str. Paris] Length = 483 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 212/479 (44%), Positives = 307/479 (64%), Gaps = 18/479 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +++ S+VEL I I+ SN +NA+I + +A A+ +D + NG+ + L GIP Sbjct: 13 LHNREFSSVELTQHCINKIQ-SNKDLNAFISLDEDQALKEAQSADLVLKNGEGKPLTGIP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F TK ++T S +L F+ Y++T+ K NGA+++GK NMDEFAMGSSNE Sbjct: 72 MALKDLFCTKRLNTTCASKMLANFQAPYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNEN 131 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G V +PW + PGGSSGGS+AAVAG L +IG+DTGGSIRQPA+F G G Sbjct: 132 SYFGSVKNPWDR-----ERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISG 186 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+++FA SLDQAG ++ D A++L IAG+D D+T V+ +PDY Sbjct: 187 IKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVIPDYSA 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + + + +G+P + + I + ++ GA+I+EI L + +P YY Sbjct: 247 EIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHNAVKLFENLGAEIIEIDLKLQPFWVPCYY 306 Query: 316 IISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ AEASSNL+RYDG+R+G R + ++E+ N+RS GFG EVK RI+ GT+VLSS Sbjct: 307 VIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVLSSGF 366 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D++YL A+K+R LI+ + VDVIL PTTPT+AF LG++ N+ + + DVF Sbjct: 367 FDAYYLHAQKVRRLIRDELITTL-NSVDVILGPTTPTTAFKLGEKIND--PIQNYLADVF 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 TVA N+AGLPAIS+P E K+P+GLQL+G+ F E L ++ A +++ H W Sbjct: 424 TVAANLAGLPAISIPTGF-ENKLPIGLQLMGKHFSESRLLAI-------AHHYQQHTNW 474 >gi|222109451|ref|YP_002551715.1| aspartyl/glutamyl-tRNA amidotransferase subunit a [Acidovorax ebreus TPSY] gi|221728895|gb|ACM31715.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidovorax ebreus TPSY] Length = 500 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/491 (44%), Positives = 306/491 (62%), Gaps = 11/491 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL+ + +++ LRSK +SAVE ++ A + + AY+ + A A D Sbjct: 7 SELHDLGIAQLTSALRSKQVSAVEAAQHFL-ARARQHLNLGAYVAMNEDATLAQARAQDA 65 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G A L G+PI KD F T+ + A S +L G++ +++TV +L D G V LGK Sbjct: 66 ALAAGTAAPLAGVPIAHKDIFVTRDFPSTAGSKMLAGYQSPFDATVVTRLADAGCVTLGK 125 Query: 122 LNMDEFAMGSSNETSYYGPV----ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LN DEFAMGS+NE S PV +P R+ T + PGGSSGGS+ AV+ L A G Sbjct: 126 LNCDEFAMGSANENSAVAPVGYDAPAPVRNPWDTSRI-PGGSSGGSAVAVSARLAPAVTG 184 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL A+ G Sbjct: 185 TDTGGSIRQPASFCGVTGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAMCG 244 Query: 238 YD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + D+T +++P D+ L+ SI G+ +GIP E+ D L+ + + + G Sbjct: 245 PDPDRDSTSLDVPAEDFSAKLNDSIDGLRIGIPAEFFGDGLAGDVRAAVDAALKEYEKLG 304 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGF 355 AK+V ISLP T+ ++P YYII+PAEASSNL+R+DGV++G R + D+++MY+ TR+ GF Sbjct: 305 AKLVPISLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRAKDYADLVDMYKKTRAEGF 364 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIMIGTYVLS YD++YL+A+KIR +I DF AF+ D+I P P+ A+ Sbjct: 365 GDEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIADDFQNAFKD-CDLIAGPVAPSVAWK 423 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG+ N+ + D+FT+ ++AGLP +SVPA MP+GLQLIG F+E L + Sbjct: 424 LGEHGND--PLADYLADIFTLPASLAGLPGMSVPAGFGAGGMPVGLQLIGNYFQEGRLLN 481 Query: 476 VGQIIEKEAGY 486 +++ + Sbjct: 482 AAHRLQQATDF 492 >gi|121592671|ref|YP_984567.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidovorax sp. JS42] gi|120604751|gb|ABM40491.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acidovorax sp. JS42] Length = 500 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/491 (44%), Positives = 305/491 (62%), Gaps = 11/491 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL+ + +++ LRSK +SAVE ++ A + + AY+ + A A D Sbjct: 7 SELHDLGIAQLTSALRSKQVSAVEAAQHFL-ARARQHQNLGAYVAMNEDATLAQARAQDA 65 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G A L G+PI KD F T+ + A S +L G+ +++TV +L D G V LGK Sbjct: 66 ALAAGTAAPLAGVPIAHKDIFVTRDFPSTAGSKMLAGYHSPFDATVVTRLADAGCVTLGK 125 Query: 122 LNMDEFAMGSSNETSYYGPV----ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LN DEFAMGS+NE S PV +P R+ T + PGGSSGGS+ AV+ L A G Sbjct: 126 LNCDEFAMGSANENSAVAPVGCDAPAPVRNPWDTSRI-PGGSSGGSAVAVSARLAPAVTG 184 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL A+ G Sbjct: 185 TDTGGSIRQPASFCGVTGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAMCG 244 Query: 238 YD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + D+T +++P D+ L+ SI G+ +GIP E+ D L+ + + + G Sbjct: 245 PDPDRDSTSLDVPAEDFSAQLNDSIDGLRIGIPAEFFGDGLAGDVRAAVDAALKEYEKLG 304 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGF 355 AK+V ISLP T+ ++P YYII+PAEASSNL+R+DGV++G R + D+++MY+ TR+ GF Sbjct: 305 AKLVPISLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRAKDYADLVDMYKKTRAEGF 364 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIMIGTYVLS YD++YL+A+KIR +I DF AF+ D+I P P+ A+ Sbjct: 365 GDEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIADDFQNAFKD-CDLIAGPVAPSVAWK 423 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG+ N+ + D+FT+ ++AGLP +SVPA MP+GLQLIG F+E L + Sbjct: 424 LGEHGND--PLADYLADIFTLPASLAGLPGMSVPAGFGAGGMPVGLQLIGNYFQEGRLLN 481 Query: 476 VGQIIEKEAGY 486 +++ + Sbjct: 482 AAHRLQQATDF 492 >gi|209559884|ref|YP_002286356.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes NZ131] gi|229464473|sp|B5XHZ9|GATA_STRPZ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|209541085|gb|ACI61661.1| Aspartyl-tRNA(Asn) amidotransferase subunit A [Streptococcus pyogenes NZ131] Length = 488 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 292/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TK I T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKSILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYTEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|303231504|ref|ZP_07318234.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Veillonella atypica ACS-049-V-Sch6] gi|302513847|gb|EFL55859.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Veillonella atypica ACS-049-V-Sch6] Length = 486 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 302/475 (63%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I +++AY+ + A A+A+ D+ I G+A Sbjct: 4 IHELHTKLVNKEISAVELTNAVISHKAKVEPEVHAYLSDSHELALASAKAVDEAIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V ++L N V LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDQPATCASKMLEHFIPPYNASVIERLHANHLVSLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW + PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTANPWNL-----ECVPGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AIAG+D D+T + Sbjct: 179 ASFCGVVGMKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAIAGHDPKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY +AL ++ + +G+PKE+ D L+ + K + I K GA+IVE+SLP T Sbjct: 239 GERVDYTKALVNDVKNLKIGVPKEFFGDGLNVEVRKAIDEAIETYKKLGAEIVEVSLPST 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YGLRV +++EM TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGLRVPADNLVEMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R +IK +F AF + VD++L PT P +A+ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRVIKNEFDAAFSK-VDLLLAPTAPNTAYKFGEKINDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSDNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|188585103|ref|YP_001916648.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Natranaerobius thermophilus JW/NM-WN-LF] gi|229486005|sp|B2A5W7|GATA_NATTJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|179349790|gb|ACB84060.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Natranaerobius thermophilus JW/NM-WN-LF] Length = 491 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 215/487 (44%), Positives = 305/487 (62%), Gaps = 11/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + E + L D S+ ELV S IE + + AYI + ++A A ++E D + Sbjct: 2 KLHELTLMEVKRGLEQGDFSSEELVTSVYDRIEETEDHIKAYITLTKEQALAQSKEIDSQ 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ L GIP+ IKD TK + T S IL+ F P Y +TV KL + GA+++GK Sbjct: 62 RAKGEELGPLAGIPVAIKDNICTKDVTTSCASKILEDFVPPYNATVISKLAEAGAIIVGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S + +PW + + PGGSSGGS+A+VA ++G+DTG Sbjct: 122 TNMDEFAMGSSTENSAFFVTSNPWDT-----ERVPGGSSGGSAASVASAQVPLALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G VG+KPTYGR SR G+++FA SLDQ G +++ V D+A+ L I+G+D Sbjct: 177 GSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPLSKNVEDTALALDIISGHDHM 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T V+L VP++ L+Q I +T+GIPKEY + + + + + ++ + Sbjct: 237 DSTSVDLEVPNHTDFLNQDIDELTIGIPKEY-YELVDNDVKSLVESSLQSIEPEAGNYRQ 295 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP T++AL AYY+I+PAEASSNLAR+DGVRYG R D+ MY TR GFG EVK Sbjct: 296 VSLPTTEHALSAYYLIAPAEASSNLARFDGVRYGQRFATDDLKTMYNQTRKEGFGNEVKQ 355 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+M+GTY LS+ YD+ YL+A K+R+LIK++F + F + DV++ PTTPT F G EN Sbjct: 356 RVMLGTYALSAGYYDALYLKALKVRSLIKQEFEQVFSE-CDVLIAPTTPTVPFREG--EN 412 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + ND+ T VN+AGLP+IS+P +P+GLQ+IG+ F E + V IE Sbjct: 413 VDDPLTMYKNDICTAPVNLAGLPSISIPCGFS-NGLPVGLQVIGKAFDEGKVIQVAHKIE 471 Query: 482 KEAGYFR 488 + F+ Sbjct: 472 QMLQVFK 478 >gi|94989139|ref|YP_597240.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS9429] gi|94993032|ref|YP_601131.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes MGAS2096] gi|166217716|sp|Q1JA74|GATA_STRPB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217717|sp|Q1JKC7|GATA_STRPC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|94542647|gb|ABF32696.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus pyogenes MGAS9429] gi|94546540|gb|ABF36587.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus pyogenes MGAS2096] Length = 488 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 291/486 (59%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + PKEY + + P I +T + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIAFPKEYLGEGIDPKIKETVLAAAKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI DF + F D+IL PTTP AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPAVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|220929837|ref|YP_002506746.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Clostridium cellulolyticum H10] gi|254790388|sp|B8I601|GATA_CLOCE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|220000165|gb|ACL76766.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium cellulolyticum H10] Length = 486 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/484 (43%), Positives = 298/484 (61%), Gaps = 20/484 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E+R L +++ISA+EL +Y+ I + ++ +Y+ V A AE++ I G Sbjct: 6 LTIKEARKLLDNREISALELTRTYLDRINTLDGKVESYLSVTEDMALKQAEQAQNLIDYG 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ IKD +G T S +L+ F Y +T KL+ + AV+LGK N+DE Sbjct: 66 KASLLTGIPLSIKDNICIEGTKTTCASKMLEDFVSPYTATAVDKLFADNAVILGKTNLDE 125 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG S E S + +P+ D T PGGSSGGS+A V+ L S+G+DTGGS+RQ Sbjct: 126 FAMGGSTENSAFKITKNPF---DLTR--VPGGSSGGSAACVSASLALGSLGSDTGGSVRQ 180 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G+++FA S DQ G I +TV D AI+L +I G D DAT + Sbjct: 181 PASFCGVVGMKPTYGLVSRYGLVAFASSFDQIGPIAKTVEDCAIILDSICGNDPKDATSL 240 Query: 247 NLPVPDYER------ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 YE ++ I+G G+PKEY + L+ + ++ + I L+ GAKI Sbjct: 241 K-----YENDSSYSSSVSGDIKGFKFGLPKEYLTEGLNAEVKESLYKSIDKLESMGAKIE 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E S+P ++A+PAYY++S AEASSNL+RYDGV+YG R + K E+ +R+ GFG+EV Sbjct: 296 EFSMPVLKHAVPAYYLMSSAEASSNLSRYDGVKYGYRADNCKSFNELIGKSRAEGFGKEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GTY L+S YD++Y +A K+RTLI F EAF + DV+L PTTP +AF +G+ Sbjct: 356 KRRILLGTYSLASGYYDAYYKKALKLRTLISNGFNEAFTK-YDVVLHPTTPETAFKIGQN 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N+ +M D++TVAVN+AGLP+IS+P +P+GL G+P E+ +F Sbjct: 415 SNSPLAM--YLADIYTVAVNIAGLPSISLPCGYDSNGLPIGLSFTGKPLGEKDIFRAAAS 472 Query: 480 IEKE 483 E E Sbjct: 473 FEAE 476 >gi|312866418|ref|ZP_07726636.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus downei F0415] gi|311098112|gb|EFQ56338.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus downei F0415] Length = 488 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/479 (42%), Positives = 294/479 (61%), Gaps = 11/479 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N V E + L K+ISA EL + ++ I + + ++I V ++A + A+ D+ Sbjct: 3 FNNQTVEELHNLLVKKEISATELTQATLEDISSREETVGSFITVAQEEALSQAKALDEEG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +TKGI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTKGILTTAASKMLCNYEPIFDATAVANAKQKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DQTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A +L AIA D+ D+ Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQVLNAIASEDKKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + Q I+GM + +PKEY + + P I + + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGQDIKGMKIALPKEYLGEGIDPQIKENILAAAQQFEKLGAVVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + ++Y TRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADEATSLEDIYVKTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PT+PT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLILGPTSPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + D+ T+ VN+AGLP IS+P+ + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISLPSGFVD-GLPVGLQLIGPKYGEETIYQAAAAFE 471 >gi|94263756|ref|ZP_01287563.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [delta proteobacterium MLMS-1] gi|93455856|gb|EAT06019.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [delta proteobacterium MLMS-1] Length = 487 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 225/491 (45%), Positives = 318/491 (64%), Gaps = 12/491 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ M + + L +D S++E ++ + +E ++NAYI V ARAAA +D++ Sbjct: 2 DLSAMTIGQLAQGLARRDFSSLEATEAVLARLETVGKKVNAYITVDGDGARAAAAAADRQ 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+A L G+P+ +KD T+G+ T S IL+ F P Y++TV +L GAV++GK Sbjct: 62 RASGEAPPLGGVPLALKDVLCTRGMRTTCGSRILENFVPPYDATVVARLRRAGAVLIGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 MDEFAMGS+NE +PW ++D + GGSSGGS+AAVA LCA ++GTDTGG Sbjct: 122 TMDEFAMGSANENCALAVPHNPW-NLD----YICGGSSGGSAAAVAADLCAGALGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D+A+LL +AG+D D Sbjct: 177 SIRQPASHCGVVGLKPTYGRISRYGLLAFASSLDQIGPLTKDVYDAALLLNLLAGHDRRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + PVPDY AL ++G+ +G+P+EY L + K + I L++AGA++ EI Sbjct: 237 STSMAEPVPDYTAALADGVRGLKIGLPREYFAIGLDDEVKKLTEAAIKQLEEAGAELCEI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKH 361 SLPHT+Y + AYYII+PAEASSNLARYDGVR+G R E D +L MYE +RS GFG EVK Sbjct: 297 SLPHTEYGVAAYYIIAPAEASSNLARYDGVRFGHRDEQADELLAMYERSRSQGFGMEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI+IGTY LSS Y+++Y +A ++R LI D+ AF D+I++P TPT+A+PL + Sbjct: 357 RIIIGTYALSSGYYEAYYRKASQVRALIIEDYRRAFAD-CDLIVSPVTPTTAWPL---NS 412 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S + +D+ T+ N+AGLP +S+P +P+GLQL FRE+ L +E Sbjct: 413 KSDPLSVYLSDILTIPANLAGLPGLSLPCGFSGAGLPVGLQLQANHFREDLLLRAAAELE 472 Query: 482 KE--AGYFRPH 490 + G RP Sbjct: 473 RRLAGGQRRPE 483 >gi|303228983|ref|ZP_07315793.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Veillonella atypica ACS-134-V-Col7a] gi|302516397|gb|EFL58329.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Veillonella atypica ACS-134-V-Col7a] Length = 486 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/475 (45%), Positives = 302/475 (63%), Gaps = 9/475 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +K+ISAVEL ++ I +++AY+ + A A+A+ D+ I G+A Sbjct: 4 IHELHTKLVNKEISAVELTNAVISHKAKVEPEVHAYLSDSHELALASAKAVDEAIAKGEA 63 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP IKD K S +L+ F P Y ++V ++L N V LGKLNMDEF Sbjct: 64 ISPLAGIPGAIKDNICIKDQPATCASKMLEYFIPPYNASVIERLHANHLVSLGKLNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG S E S +PW + PGGSSGGS+AAV+ ++G+DTGGSIRQP Sbjct: 124 AMGGSTENSALAKTANPWNL-----ECVPGGSSGGSAAAVSSGSAIWALGSDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYG SR G+I+FA SLDQ G +TR V D+A++L AIAG+D D+T + Sbjct: 179 ASFCGVVGMKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAIAGHDPKDSTSIP 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY +AL ++ + +G+PKE+ D L+ + K + I K GA+IVE+SLP T Sbjct: 239 GERVDYTKALVNDVKNLKIGVPKEFFGDGLNAEVRKAIDEAIETYKKLGAEIVEVSLPST 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +YAL AYYII+ AEASSNLARYDGV YGLRV +++EM TR+ GFG EV+ RI++GT Sbjct: 299 KYALSAYYIIALAEASSNLARYDGVSYGLRVPADNLVEMSTKTRTEGFGPEVQRRILLGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++YL+A K+R +IK +F AF + VD++L PT P +A+ G++ N+ +M Sbjct: 359 YVLSAGYYDAYYLKALKVRRVIKNEFDAAFSK-VDLLLAPTAPNTAYKFGEKINDPLAM- 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+AG+P IS+PA + +P+GLQL+G EETL E+ Sbjct: 417 -YLEDICTVPANLAGIPGISIPAGMSSDNLPIGLQLLGPAMGEETLLRAAFTFEQ 470 >gi|218887923|ref|YP_002437244.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758877|gb|ACL09776.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 501 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 211/483 (43%), Positives = 306/483 (63%), Gaps = 13/483 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++++E RDRL ++++A ++ + + I + + A + + A A A D + Sbjct: 11 LSLAEVRDRLARRELTAEQVTAACLDRITATEPAIAALLVTRGEGALAEARALDAAGPD- 69 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A+ L G+P+ +KD T G T S IL F PHY++ KL + GAV+LGK NMDE Sbjct: 70 PAKPLWGVPLTVKDALTTAGTRTTCGSRILGDFTPHYDAFAVGKLREAGAVILGKTNMDE 129 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S +GP +PW PGGSSGGS+A+VA C S+GTDTGGSIRQ Sbjct: 130 FAMGSSTENSAFGPTRNPWNVAR-----VPGGSSGGSAASVAAGQCFGSLGTDTGGSIRQ 184 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG+KPTYGR SR G++++ SLDQ G +TRTV D+A+LL IAG+D DAT Sbjct: 185 PASLCGCVGLKPTYGRVSRFGLVAYGSSLDQIGPLTRTVEDAALLLSVIAGHDPRDATSA 244 Query: 247 NLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 LPV DY AL + + G+ +G+P+E+R + + P + + + + GA IV++ L Sbjct: 245 TLPVDDYMGALASRKDLSGVRIGVPREFRGEGIDPEVSAACEAALDTARGLGATIVDVEL 304 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 PHT Y++ AYYII+PAEASSNLAR+DGVRYG R E +D+ ++Y +R+ GFG EV+ RI Sbjct: 305 PHTPYSIAAYYIIAPAEASSNLARFDGVRYGRRAESPRDLADLYVRSRAEGFGDEVQRRI 364 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTYVLSS YD++Y +A ++R LI+ D+ +A + DV+ P +P +A+ LG E S Sbjct: 365 MLGTYVLSSGYYDAYYRKAAQVRRLIREDYEKALSR-CDVLCGPASPVTAWGLG--ELTS 421 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + DVFT+++N+AGLP + +P + + MP+GLQ++G+ F E L + ++ Sbjct: 422 DPLKMYMMDVFTLSLNLAGLPGLCIPVGMGSRSGMPVGLQMLGRAFGEGDLLAAANVLSG 481 Query: 483 EAG 485 G Sbjct: 482 ALG 484 >gi|323484766|ref|ZP_08090123.1| hypothetical protein HMPREF9474_01874 [Clostridium symbiosum WAL-14163] gi|323691835|ref|ZP_08106091.1| hypothetical protein HMPREF9475_00953 [Clostridium symbiosum WAL-14673] gi|323401872|gb|EGA94213.1| hypothetical protein HMPREF9474_01874 [Clostridium symbiosum WAL-14163] gi|323504117|gb|EGB19923.1| hypothetical protein HMPREF9475_00953 [Clostridium symbiosum WAL-14673] Length = 494 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/473 (44%), Positives = 290/473 (61%), Gaps = 10/473 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEG 73 +++ K +S E V++ I S ++A+I + +KA AEE RI G + L G Sbjct: 14 QIKEKKVSVKEAVEASFSRIRESEETVHAFITLEEEKALKNAEEVQARIDAGVLSGPLAG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ +KD T+G+ T S IL F P Y + L GAV++GK NMDEFAMGS+ Sbjct: 74 VPMAVKDNICTEGMKTTCGSRILYNFVPAYSAQAVTNLKKAGAVIVGKTNMDEFAMGSTT 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETS++GP +PW K PGGSSGGS AAVA ++G+DTGGSIRQP+SF G Sbjct: 134 ETSWFGPTANPW-----NKKHVPGGSSGGSCAAVASGEVFYALGSDTGGSIRQPSSFCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 GIKPTYG SR G+I++ SLDQ G + R D A +L+ +A +D+ D+T V ++ Sbjct: 189 TGIKPTYGTVSRYGLIAYGSSLDQIGPVARDTADCAAVLEILASHDKKDSTSVPRKDYNF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 AL +GM +GIP +Y + L I QG LK GA++ L +YA+PA Sbjct: 249 TEALTGEAKGMKIGIPSDYLGEGLDDEIRTAVLQGAELLKSQGAEVEFFDLGMVEYAIPA 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ AEASSNL+R+DGV+YG R E +D+ EMY+ +RS GFG EVK RIM+G++VLSS Sbjct: 309 YYVIASAEASSNLSRFDGVKYGYRTGEYEDLHEMYKKSRSEGFGTEVKRRIMLGSFVLSS 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++YL+A + + LIK+ F AFE+ D+IL P P++A +G E+ + D Sbjct: 369 GYYDAYYLKALRTKALIKQAFDRAFEK-YDIILGPAAPSTAPAMG--ESLCDPLKMYLGD 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++TV+VN+AGLP ISVP EK +P+GLQ+I F E+ LF EK G Sbjct: 426 IYTVSVNLAGLPGISVPCKTDEKGLPIGLQMIAGCFEEKKLFRAASAYEKARG 478 >gi|261855845|ref|YP_003263128.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Halothiobacillus neapolitanus c2] gi|261836314|gb|ACX96081.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halothiobacillus neapolitanus c2] Length = 490 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 215/479 (44%), Positives = 297/479 (62%), Gaps = 10/479 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++S R L + SA EL Y+ + + +NA+I + A AAA ++D+R+ Sbjct: 5 LQSLSHLRAGLDAGAFSARELTQYYLDRMTRFDGALNAFITPTPELALAAATQADQRLAA 64 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G+ L GIP KD F T G+ T S +L + Y++TV QKL GAVMLGK NMD Sbjct: 65 GERGPLLGIPYAHKDIFCTAGVRTTCASKMLGDWVAPYDATVHQKLSTAGAVMLGKTNMD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S +G V +PW SSGGS+AAVA L + GTDTGGSIR Sbjct: 125 EFAMGSSNENSAFGAVKNPWDHAAVPGG-----SSGGSAAAVAARLVPVATGTDTGGSIR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA++ G GIKPTYGR SR G+I++A SLDQ G++ + D A++L+A+AG+D D+T Sbjct: 180 QPAAYCGITGIKPTYGRVSRFGMIAYASSLDQGGVLAGSAEDCALMLQAMAGHDPRDSTS 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 N PVPDY LDQ + G+ +G+P+++ L + + I+ L+ GA+ V+I LP Sbjct: 240 ANQPVPDYVTELDQPLVGLRLGVPRQWFTAGLDSVVAARIETAIAELESMGAQRVDIDLP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 + AL AYY+I+PAEASSNL+R+DGVR+G R E +D+ ++YE +RS GFG+EV+ RI+ Sbjct: 300 DAELALAAYYLIAPAEASSNLSRFDGVRFGYRCAEPRDLNDLYERSRSEGFGEEVQRRIL 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTY LS+ YD+ Y RA+K R I +F AF DVI P PT AF LG ++ Sbjct: 360 IGTYALSAGYYDAFYGRAQKARRQIAANFEAAFRD-CDVIAGPVAPTVAFDLGAHVSDPA 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M D++T+ VN+AGLP +SVP + P+G+QLIG PF E L +V ++ Sbjct: 419 TM--YLEDIYTIPVNLAGLPGMSVPVGFSGSR-PVGMQLIGSPFTEGRLLAVAHQYQQR 474 >gi|281490650|ref|YP_003352630.1| aspartyl/glutamyl-tRNa amidotransferase subunit A [Lactococcus lactis subsp. lactis KF147] gi|161702241|gb|ABX75702.1| Aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactococcus lactis subsp. lactis KF147] Length = 486 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 213/485 (43%), Positives = 308/485 (63%), Gaps = 11/485 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N ++ E + L +K+ISA+EL + + I Q++A++++ +KA A D R I Sbjct: 4 NNKSIKELHELLVNKEISALELTKATLSDISAREPQIDAFLKITEEKALQDAAAIDARGI 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D +GI I +KD T+GI T + S IL G+ P Y +TV KL ++G + +GKLNM Sbjct: 64 NPDVV-TDGISIAVKDNIVTEGIETTSASKILGGWIPPYNATVANKLSESGLITIGKLNM 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG S E S P + W D T PGGSS GS+A+VA S+G+DTGGSI Sbjct: 123 DEFAMGGSGENSSVKPTKNAW---DQTK--VPGGSSSGSAASVASGQVRLSLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYGR SR G+I+FA SLDQ G + TV ++A LL I+G+D+ D+T Sbjct: 178 RQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLAPTVEENAQLLNVISGFDKNDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N+ VPD+ + Q I+GM + +PKEY + + + + L+ GA + E+SL Sbjct: 238 SSNVAVPDFTSKIGQDIKGMKIALPKEYFGEGIDEKVKEQILAAAKHLEKLGAIVEEVSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 PH++Y + YYII+ +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EV+ RI Sbjct: 298 PHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDIKNLEDLYVKSRSEGFGPEVQRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LS+ YD H+ +A ++RTLI DF + FE+ D+IL PTTPT A+ LG ++ Sbjct: 358 MLGTFSLSAGSYDKHFKKAGQVRTLIINDFAKVFEK-YDLILGPTTPTPAWDLGARVDDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM D+ T+ VN+AGLP IS+PA + +P+G+QLIG+ + EET++ V E Sbjct: 417 LSM--YLADLLTIPVNLAGLPGISIPAGFAD-GLPVGMQLIGKRYDEETIYQVAAAFEAT 473 Query: 484 AGYFR 488 + + Sbjct: 474 TDFHK 478 >gi|237746690|ref|ZP_04577170.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oxalobacter formigenes HOxBLS] gi|229378041|gb|EEO28132.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oxalobacter formigenes HOxBLS] Length = 483 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/474 (45%), Positives = 302/474 (63%), Gaps = 14/474 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE L++K ISA EL +++ I +S++NA++ V A +D+R+ +A Sbjct: 6 LSELSALLQTKQISATELARLFLKRI--GDSELNAFLHVDETLTLKQAAAADERLAKNEA 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI KD F TK + A S IL + + +TV QKL D G V LGKLN DEFA Sbjct: 64 HPLTGVPIAHKDIFVTKDWRSTAGSKILANYTSPFNATVVQKLQDAGMVHLGKLNCDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE SY+GPV +PW PGGSSGGS+AAVA L A+ TDTGGSIRQPA Sbjct: 124 MGSSNENSYFGPVRNPWDP-----DAVPGGSSGGSAAAVAARLTPAATATDTGGSIRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G GIKPTYG SR G+I++A SLDQ G I +T D A+LL + G+D D+T + Sbjct: 179 AFCGVTGIKPTYGLVSRYGMIAYASSLDQGGPIAKTAEDCALLLNEMTGFDPKDSTSLEK 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY L++ ++G+ +GIP+EY D LSP +++ + + + GAK+V+ISL +T Sbjct: 239 SPEDYTGCLNRPLEGLRIGIPREYFSDGLSPEVEQPIRNALKEYEKLGAKLVDISLKNTA 298 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 +PAYY+I+PAEASSNL+R+DGVRYG R E D+ +MY TRS GFG EV+ RI++GT Sbjct: 299 LCIPAYYVIAPAEASSNLSRFDGVRYGFRAENYTDLQDMYRKTRSEGFGDEVQRRILVGT 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++Y++A+KIR LI D+ AF + +VI+ P +PT A+ LG + ++ + Sbjct: 359 YVLSHGYYDAYYIQAQKIRRLIAEDYKNAFRE-CEVIMGPVSPTVAWNLGDKADD--PVA 415 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQ 478 + D+FT++ N+AGLP +S+P + P+GLQL G F E L ++ Sbjct: 416 NYLGDIFTLSTNLAGLPGMSIPCGFGQGNHASRPVGLQLTGNYFDETRLLNIAH 469 >gi|298253223|ref|ZP_06977015.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Gardnerella vaginalis 5-1] gi|297532618|gb|EFH71504.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Gardnerella vaginalis 5-1] Length = 513 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/484 (44%), Positives = 312/484 (64%), Gaps = 20/484 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ ++ +++K++S+ ELV++++ IE++ ++ A++ V A A A+ D + Sbjct: 6 DLVKLSAADMAKAVKAKEVSSRELVEAHLAVIESAEPEIKAFLHVSADIALEQADAFDAK 65 Query: 63 IINGDAR---DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 NG+ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 66 NANGETEGLPELAGVPIAIKDMIVTKGIPTTAASKILEGWVPPYDATVIEKLKAAGMPIL 125 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 126 GKTNLDEFAQGSSTEHSAYQTTCNPWDT-----ERVPGGSGGGSAAAVAAFEAPIALGTD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G D Sbjct: 181 TGGSIRQPGALTGTVGAKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGND 240 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVP +A + ++G+ VG+ KE D P ++ + + + LKD Sbjct: 241 RRDSTSIPAPVPPMAQAAREGARRDLKGLKVGLVKELSGDGFQPGVEARFNEAVQLLKDM 300 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----EGKDILEMYENT 350 GA++ E+S PH Y+L AYYII P+E SSNLARYDG+RYGLRV + + M T Sbjct: 301 GAEVTEVSCPHFPYSLAAYYIIMPSEVSSNLARYDGMRYGLRVMPPADKPQTAANMMAAT 360 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI RDF EAF++ VDV+++PT+P Sbjct: 361 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFEEAFKK-VDVLISPTSP 419 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+AF G++ ++ SM ND+ T+ NMAG+PA+S+PA L + +P+G+Q+I + Sbjct: 420 TTAFKFGEKMDDPLSM--YMNDIATIPANMAGVPALSLPAGLSDDGLPVGIQIIAPQCHD 477 Query: 471 ETLF 474 E ++ Sbjct: 478 EKMY 481 >gi|313903502|ref|ZP_07836893.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermaerobacter subterraneus DSM 13965] gi|313466323|gb|EFR61846.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermaerobacter subterraneus DSM 13965] Length = 489 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/483 (44%), Positives = 298/483 (61%), Gaps = 11/483 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL F RL ++S+ EL ++ I+ + + AY+ V A+ A A A E D Sbjct: 2 MEELWFEPAHRLAQRLAKGEVSSRELTRLFLDRIQELDGTVGAYLTVTAELALAQAREED 61 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+A L G+P+ +KD +G+ T A S +L G+RP Y +T ++L GAV+L Sbjct: 62 EKRRRGEAAGPLAGVPVAVKDNLCIQGVPTTAASRLLAGYRPPYTATAVERLRRAGAVIL 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S + +PW SSGGS+AAVA A++G+D Sbjct: 122 GKTNMDEFAMGSSTENSAFRITRNPWDPQRVPGG-----SSGGSAAAVAAGEAPAALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYGR SR G+I+FA SLDQ G + R V D+A+LL+AIAG D Sbjct: 177 TGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPLARDVTDAALLLEAIAGQD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT +PV + AL ++G+ +G+P+E+ + + P + + + + L GA Sbjct: 237 PADATSAPVPVAAWRDALTGEVEGLRIGLPREFYGEAVEPPVAEAVRAAVERLLADGAVA 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E SLP ++ALPAYY+I+ AEASSNLARYDGVRYG R E D+ MY TR FG EV Sbjct: 297 EETSLPSAEHALPAYYLIATAEASSNLARYDGVRYGFRAEAGDLAGMYLETRK-NFGPEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GT+ L YD++Y +A ++R LIK DF F DV++TPT+P AFPLG Sbjct: 356 KRRILLGTFALREGYYDAYYRKALQVRRLIKDDFDRLFAT-FDVLITPTSPVVAFPLGAR 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + +M D+ T+ VN+AGLPA+SVP +P+GLQ+IG+PF E+ + V Sbjct: 415 TEDPLAM--YAADICTLPVNLAGLPAVSVPCGFA-GGLPVGLQIIGRPFAEDAVLRVAYA 471 Query: 480 IEK 482 IE+ Sbjct: 472 IEQ 474 >gi|254390815|ref|ZP_05006027.1| glutamyl-tRNA amidotransferase subunit A [Streptomyces clavuligerus ATCC 27064] gi|294815253|ref|ZP_06773896.1| Glutamyl-tRNA Gln amidotransferase subunit A [Streptomyces clavuligerus ATCC 27064] gi|326443608|ref|ZP_08218342.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces clavuligerus ATCC 27064] gi|197704514|gb|EDY50326.1| glutamyl-tRNA amidotransferase subunit A [Streptomyces clavuligerus ATCC 27064] gi|294327852|gb|EFG09495.1| Glutamyl-tRNA Gln amidotransferase subunit A [Streptomyces clavuligerus ATCC 27064] Length = 497 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 215/468 (45%), Positives = 313/468 (66%), Gaps = 14/468 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIINGDARDLEGIPIGI 78 D++AVE+ ++++ IE + +++A++ V + A A A D KR G L G+P+ + Sbjct: 20 DLTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDAKRAAGGKLGPLAGVPLAL 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T+G+ T S IL+G+ P Y++T+ +KL + V+LGK NMDEFAMGSS E S + Sbjct: 80 KDIFTTEGVPTTVGSKILEGWIPPYDATLVRKLKEADVVILGKTNMDEFAMGSSTENSAF 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW D T PGGS GGSSAA+A + +IGTDTGGSIRQPA+ TGTVG+KP Sbjct: 140 GPTGNPW---DLTR--IPGGSGGGSSAALAAYEAPLAIGTDTGGSIRQPAAVTGTVGVKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERAL 257 TYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T V+ PVP E A Sbjct: 195 TYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTSVDAPVPPVVEAAR 254 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + S+ GM VG+ +++R ++ + + + + ++ L++ GA+IVE+ P AL AYY+I Sbjct: 255 NGSVAGMRVGVVQQFRGEHYQAGVMQRFDESVALLRELGAEIVELDCPSFDLALSAYYLI 314 Query: 318 SPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +P+E SSNLAR+D +RYGLRV + E+ TR GFG EVK R+++GTY LSS Sbjct: 315 APSECSSNLARFDAMRYGLRVGDDGSRSAEEVTALTREAGFGDEVKRRVILGTYALSSGY 374 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y A+K+RTLIK+DF AFEQ VDVI++PTTPT+AFP+G+ ++ M D+ Sbjct: 375 YDAYYGSAQKVRTLIKQDFDAAFEQ-VDVIVSPTTPTTAFPIGERADD--PMAMYLADLC 431 Query: 435 TVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+ N+AG A+S+P L E +P+GLQ+I +++ L++VG +E Sbjct: 432 TIPTNLAGNAAMSLPCGLAPEDNLPVGLQIIAPAMQDDRLYTVGAAVE 479 >gi|290957201|ref|YP_003488383.1| glutamyl tRNA(Gln) amidotransferase subunit A [Streptomyces scabiei 87.22] gi|260646727|emb|CBG69824.1| putative glutamyl tRNA(Gln) amidotransferase subunit A [Streptomyces scabiei 87.22] Length = 498 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/468 (46%), Positives = 313/468 (66%), Gaps = 14/468 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +++AV++ ++++ IE + +++A++ V + A A A D++ G+ L G+P+ + Sbjct: 21 ELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKKARGEKLGPLAGVPLAL 80 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T GI T S IL+G+ P Y++T+T++L D V+LGK NMDEFAMGSS E S Y Sbjct: 81 KDIFTTVGIPTTVGSKILEGWIPPYDATLTKRLKDADVVILGKTNMDEFAMGSSTENSAY 140 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW D T PGGS GGSSA++A + +IGTDTGGSIRQPA+ TGTVG+KP Sbjct: 141 GPTGNPW---DLTR--IPGGSGGGSSASLASYQAPLAIGTDTGGSIRQPAAVTGTVGVKP 195 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERAL 257 TYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T ++ PVP E A Sbjct: 196 TYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTSIDAPVPPVVEAAR 255 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + S+ GM VG+ K++R + + + + + + LK+ GA+IVE+ P AL AYY+I Sbjct: 256 NGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLKELGAEIVELDCPSFDLALAAYYLI 315 Query: 318 SPAEASSNLARYDGVRYGLRV--EGKDILEMYEN-TRSIGFGQEVKHRIMIGTYVLSSRC 374 +P+E SSNLAR+DG+RYGLR +G + E + TR GFG EVK RIM+GTY LSS Sbjct: 316 APSECSSNLARFDGLRYGLRTGDDGSNSAETVTSLTREAGFGPEVKRRIMLGTYALSSGY 375 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y A+K+RTLI RDF ++FEQ VDVI++PTTPT+AFP+G+ ++ M D+ Sbjct: 376 YDAYYGSAQKVRTLITRDFEKSFEQ-VDVIVSPTTPTTAFPIGERADD--PMAMYLADLC 432 Query: 435 TVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG +E Sbjct: 433 TIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPALKDDRLYKVGAAVE 480 >gi|297191905|ref|ZP_06909303.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces pristinaespiralis ATCC 25486] gi|197721116|gb|EDY65024.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces pristinaespiralis ATCC 25486] Length = 498 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/482 (45%), Positives = 317/482 (65%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E ++ + +++AVE+ +++ IE + +++A++ V + A A A D++ G Sbjct: 8 LTAAEIATKIAAGELTAVEVTQAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRAKG 67 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD F T+GI T S IL+G+ P Y++TVT++L V+LGK NMD Sbjct: 68 EKLGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATVTRRLKAADVVILGKTNMD 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D T PGGS GGSSAA+A + +IGTDTGGSIR Sbjct: 128 EFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALAAYEAPLAIGTDTGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ T TVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T Sbjct: 183 QPAAVTATVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTS 242 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S+ GM VG+ K++R + + + + + + LK+ GA+IVE+ Sbjct: 243 IDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLKELGAEIVELDC 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVK 360 P AL AYY+I+P+E SSNLAR+D +RYGLRV G D + E+ TR GFG EVK Sbjct: 303 PSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTKSAEDVTALTREAGFGDEVK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTY LSS YD++Y A+K+RTLI RDF +AFEQ VDVI++PTTPT+AFP+G+ Sbjct: 362 RRIMLGTYALSSGYYDAYYGSAQKVRTLITRDFEKAFEQ-VDVIVSPTTPTTAFPIGERA 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 421 DD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLYKVGAA 478 Query: 480 IE 481 +E Sbjct: 479 VE 480 >gi|319745582|gb|EFV97883.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus agalactiae ATCC 13813] Length = 488 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 307/486 (63%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ + D L K+ISA EL + ++ I + ++I + + A A AEE D + Sbjct: 3 FNNQSIDQLHDLLVKKEISATELTKATLEDIHAREQAVGSFITISDEMAIAQAEEIDDKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKAN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTNNAWDHSK-----VPGGSSGGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+ +F SLDQ G +++TV+++A LL I+G+D D+ Sbjct: 177 IRQPASFNGIVGMKPTYGRVSRFGLFAFGSSLDQIGPMSQTVKENAQLLTVISGHDVRDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V D+ + Q IQGM + +PKEY + ++P + +T + L+ GA I E+S Sbjct: 237 TSSERTVGDFTAKIGQDIQGMKIALPKEYLGEGIAPGVKETIIKAAKHLEKLGAVIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYKNLDDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++R+LI +DF + F D+IL PT PT+AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRSLIIQDFEKVFAD-YDLILGPTAPTTAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA ++ +P+G+QLIG F EET++ V E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGF-DQGLPVGMQLIGPKFSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|150391126|ref|YP_001321175.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alkaliphilus metalliredigens QYMF] gi|166989675|sp|A6TTJ8|GATA_ALKMQ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|149950988|gb|ABR49516.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alkaliphilus metalliredigens QYMF] Length = 491 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 224/487 (45%), Positives = 308/487 (63%), Gaps = 15/487 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + R K + ++V YI I+ + ++NA+I + + A A D+++ G Sbjct: 6 MTIMDIRKGYVQKQFTVKDVVQGYIDRIKELDGKINAFITLCEESALMEAAVLDEKLSRG 65 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD T+GI T S +L F P Y++T+ +KL GA+++GK NMD Sbjct: 66 EEIGLLGGIPVAIKDNMCTQGIKTSCASEMLADFIPPYDATIVKKLRAAGAIIIGKTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW D T PGGSSGGS+AA+A +IG+DTGGSIR Sbjct: 126 EFAMGSSTENSAFKVTKNPW---DLTK--VPGGSSGGSAAALAAGFAPLTIGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F GTVG+KPTYG SR G+I+FA SLDQ G T+TV+D A+ L+ + G D D+T Sbjct: 181 QPAAFCGTVGLKPTYGLVSRFGLIAFASSLDQIGPFTKTVKDCALSLQVMQGNDPLDSTS 240 Query: 246 VNL-PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + P+ DY + LD+ ++G+ VGIPKE+ + L+ I + ++ I L+ GA + E SL Sbjct: 241 IQQEPMDDYVKDLDKGVKGLKVGIPKEFFQEGLNIEISDSIKEAIKVLEQLGAVVEEFSL 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKH 361 P T L AYYIIS AEASSNLARYDGVRYG R EG I EM N+RS GFG+EVK Sbjct: 301 PVTDSGLSAYYIISSAEASSNLARYDGVRYGHRAAVYEG--IEEMMLNSRSEGFGKEVKR 358 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTYVLSS YD++Y +A R + F +AFE DVILTPT+P F +G++ Sbjct: 359 RIMLGTYVLSSGYYDAYYKKAMDFRKKTRNVFKKAFES-YDVILTPTSPVLPFTIGEKTG 417 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M D++TV VN+AG+PAIS+P ++K+P+GLQLIG + E+ L +E Sbjct: 418 DPLEM--YLADIYTVNVNIAGVPAISIPCGFSKEKLPIGLQLIGDHYSEKKLLQAAYGLE 475 Query: 482 KEAGYFR 488 +E G F+ Sbjct: 476 QELGIFK 482 >gi|91781450|ref|YP_556656.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia xenovorans LB400] gi|123169133|sp|Q146Y5|GATA_BURXL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91685404|gb|ABE28604.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia xenovorans LB400] Length = 495 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 224/494 (45%), Positives = 314/494 (63%), Gaps = 22/494 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +++ SAVEL Y++ IE +NS +NA+I+V A A+ +D + G Sbjct: 5 SLTELRAALTARECSAVELAQLYLKRIEAANS-LNAFIQVDPDLTLAQAKAADALLHTGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F TKG + A S +L + +++TV +L + G V +GK NMDEF Sbjct: 64 AGPLVGLPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVARLQNAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+GPV +PW K PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGPVQNPWDV-----KAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + R+ D A LL A+AG+D D+T + Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCATLLNAMAGFDGRDSTSLV 238 Query: 248 LPVPDYERALDQ---------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DY R L Q + G+ +G+PKEY L+ + + + + GA Sbjct: 239 RDDEDYTRYLGQPWKEDGAGKPLAGLRIGLPKEYFGAGLADDVRASIDAALKQYEALGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +VE+SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG Sbjct: 299 LVEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGP 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF Q DVI+ P PT A+ LG Sbjct: 359 EVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFRQ-CDVIMGPVAPTVAWDLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLF 474 + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 AKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARML 475 Query: 475 SVGQIIEKEAGYFR 488 V ++ + R Sbjct: 476 QVADAFQRATDWHR 489 >gi|253579109|ref|ZP_04856380.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850052|gb|EES78011.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 489 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 201/487 (41%), Positives = 299/487 (61%), Gaps = 10/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + ++++ + +S ++ V + + IE +S+++AY++ ++A AEE K Sbjct: 2 ELEKLTALQLGEKIKQRQVSVLDGVKTVFEQIEKQDSEVHAYLDTYKEEAYKRAEEVQKG 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G L G+PI IKD G T S IL+ F P Y + V +L G V++GK Sbjct: 62 IEDGTYTSPLAGVPIAIKDNICINGKKTTCASKILENFVPQYNAEVIDRLEKAGLVIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ ETS YG +PW + PGGSSGGS AAVA ++G+DTG Sbjct: 122 TNMDEFAMGSTTETSAYGITRNPWNL-----EHVPGGSSGGSCAAVAAGETYLALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP+S+ G GIKPTYG SR G++++A SLDQ G + + V D A LL+ IAG+D Sbjct: 177 GSIRQPSSYCGVTGIKPTYGTVSRYGLVAYASSLDQIGPVGKDVSDCAALLEIIAGHDTK 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + + + L I+GM G+P+EY + L P + ++ + LK+ GA++ Sbjct: 237 DSTSMKREDLQFSKELTGDIKGMKFGVPEEYLAEGLDPEVKASFMGVLDTLKELGAEVEF 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 S+ +Y +PAYYII+ AEASSNL R+DGV+YG R E + + +MY+ TR+ GFG+EVK Sbjct: 297 FSIKTMEYMIPAYYIIASAEASSNLERFDGVKYGFRAAEYEGLHDMYKKTRTAGFGEEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+G++VLSS YD++YL+A + + LIK++F +AF + DV+L P +P +A +G E Sbjct: 357 RRIMLGSFVLSSGYYDAYYLKALRTKALIKKEFDQAFGK-YDVLLAPASPFTAPKIG--E 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + D++TVAVN+ GLP I+VP K +P+G+Q+IG F E+ + Sbjct: 414 SLKDPLAMYLGDIYTVAVNLCGLPGITVPCGKDSKGLPIGIQMIGDCFMEKKILRAAHAY 473 Query: 481 EKEAGYF 487 E G F Sbjct: 474 ETSRGSF 480 >gi|291541530|emb|CBL14640.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ruminococcus bromii L2-63] Length = 484 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/488 (45%), Positives = 308/488 (63%), Gaps = 13/488 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + + L SK+ S EL SY+ IE ++ ++NAY+ V ++A AE D++I +G+ Sbjct: 3 SIEKIHEMLVSKECSCTELTKSYLDEIEKADGELNAYVNVTGEEALKTAEAVDRKIASGE 62 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 LEG+P+ +KD +TKGI T CS IL G++P Y +TV + L AVMLGK NMDE Sbjct: 63 EIGMLEGVPMTLKDNISTKGIETTCCSKILTGYKPIYNATVWETLAGENAVMLGKTNMDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS ETSY+G ++P+ S + GGSSGG ++AV + A +G+DTGGSIRQ Sbjct: 123 FAMGSSCETSYFGGAMNPFDS-----NYVSGGSSGGVASAVGANIAAYGLGSDTGGSIRQ 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYG SR G+I++A SLDQ G IT++V D+AI+ AI+ DE D+T Sbjct: 178 PASFCGIVGLKPTYGAVSRYGLIAYASSLDQIGPITKSVEDAAIVFDAISKRDEKDSTSK 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 V D L+ I+GM +GI KEY L+ + + + + K GA+IV LP Sbjct: 238 GF-VGDTYSKLNNDIKGMKIGIAKEY-LEGVRDDVKEAVLKAADIYKSMGAEIVYFDLPE 295 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMI 365 ++ALP YYII+ AEASSNL RYDG+R+G + E + +M TRS GFG+EVK RI++ Sbjct: 296 LKFALPVYYIIACAEASSNLGRYDGIRFGYKTEHYNGTHDMVCRTRSEGFGEEVKRRILL 355 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTYVLS+ YD++Y +A+ +R I + F AFE+ DVIL PT P +AF G S Sbjct: 356 GTYVLSAGYYDAYYKKAQNLRGTIVKAFNNAFEK-CDVILAPTVPMTAFEKGHAV--SDP 412 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE-ETLFSVGQIIEKEA 484 + D+ TV VN+AGLP +SVP K MP+G+QLIG+ F E E L + + + A Sbjct: 413 IETYLTDICTVPVNIAGLPGVSVPCGFNAKGMPIGMQLIGKSFGEAEILNAAYKYQQAAA 472 Query: 485 GYFRPHKW 492 F+ KW Sbjct: 473 ENFKDTKW 480 >gi|299768905|ref|YP_003730931.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter sp. DR1] gi|298698993|gb|ADI89558.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter sp. DR1] Length = 492 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 221/479 (46%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + + +Y+ V ++A A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPLVKSYVTVTPEQALAEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S ILD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKILDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V +Y L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDNYVANLNGTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|25011752|ref|NP_736147.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus agalactiae NEM316] gi|77414362|ref|ZP_00790518.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae 515] gi|39931561|sp|Q8E3P4|GATA_STRA3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|24413292|emb|CAD47371.1| Unknown [Streptococcus agalactiae NEM316] gi|77159597|gb|EAO70752.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae 515] Length = 488 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ + D L K+ISA EL + ++ I + ++I + A A A+E D + Sbjct: 3 FNNQSIDQLHDLLVKKEISATELTKATLEDIHAREQAVGSFITISDDMAIAQAKEIDDKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKAN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTNNAWDHSK-----VPGGSSGGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+ +F SLDQ G +++TV+++A LL I+G+D D+ Sbjct: 177 IRQPASFNGIVGMKPTYGRVSRFGLFAFGSSLDQIGPMSQTVKENAQLLTVISGHDVRDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V D+ + Q IQGM + +PKEY + ++P + +T + L+ GA I E+S Sbjct: 237 TSSERTVGDFTAKIGQDIQGMKIALPKEYLGEGIAPGVKETIIKAAKHLEKLGAVIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYKNLDDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++R+LI +DF + F D+IL PT PT+AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRSLIIQDFEKVFAD-YDLILGPTAPTTAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA +K +P+G+QLIG F EET++ V E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGF-DKGLPVGMQLIGPKFSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|295675144|ref|YP_003603668.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia sp. CCGE1002] gi|295434987|gb|ADG14157.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia sp. CCGE1002] Length = 495 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 222/494 (44%), Positives = 319/494 (64%), Gaps = 22/494 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ +NS +NA+I+V + A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIDAANS-LNAFIQVDPELTLAQAKAADALLHTGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F TKG + A S +L + +++TV +L + G V +GK NMDEF Sbjct: 64 AGPLVGLPIAHKDVFVTKGWRSTAGSKMLANYESPFDATVVARLQNAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+G V +PW K PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGAVQNPWDR-----KAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + ++ D A LL A+AG+DE D+T ++ Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCATLLNAMAGFDERDSTSLS 238 Query: 248 LPVPDYERALDQS---------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DY R L +S + G+ +G+PKEY L+ + + + + GA Sbjct: 239 HEPEDYTRYLGKSWRDGGAEKPLAGLRIGLPKEYFGAGLADEVRASIDAALKQYEALGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +VE+SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG Sbjct: 299 LVEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGP 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+Q DVI+ P P+ A+ +G Sbjct: 359 EVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKQ-CDVIMGPVAPSVAWDIG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLF 474 + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 AKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARML 475 Query: 475 SVGQIIEKEAGYFR 488 V ++ + R Sbjct: 476 QVADAFQRATDWHR 489 >gi|313891672|ref|ZP_07825279.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Dialister microaerophilus UPII 345-E] gi|313119950|gb|EFR43135.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Dialister microaerophilus UPII 345-E] Length = 483 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 214/475 (45%), Positives = 304/475 (64%), Gaps = 11/475 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +KDISAVEL I N + +++A++ ++A AAE D +I +G+ Sbjct: 6 IHELHKKLVNKDISAVELTKKMIANRNNVDGKIHAFLSTNDERALQAAERVDNKIKSGEV 65 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 ++ GIP IKD KG+ A S +L+ F P Y +TV ++L V LGK N+DEF Sbjct: 66 ISEIAGIPGAIKDNICIKGLPCTAASKMLENFIPPYNATVIEQLEKQDYVSLGKTNLDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S +G ++P + ++ PGGSSGGS+AAVA ++G+DTGGS+RQP Sbjct: 126 AMGSSTENSAFGKTLNPLNT-----EYVPGGSSGGSAAAVAANEVVWALGSDTGGSVRQP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASFTG VG+KPTYG SR G+++FA SLDQ G IT+ V D+AI+L +IA YD+ D+T + Sbjct: 181 ASFTGLVGLKPTYGLVSRYGLLAFASSLDQIGPITKDVTDAAIVLNSIAAYDKKDSTSIP 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY++AL ++G+ +G+ KE+ + + ++ +S+ + GA+IV+ISLPH Sbjct: 241 QEKKDYKKALISDVKGLRIGVAKEFFGKGIKEETKEAIKKALSFYEKEGAEIVDISLPHI 300 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + YYII+PAEASSNL+RYDGV YG R GK+++EMY NTRS GFG+EVK RIM+GT Sbjct: 301 SACVSIYYIIAPAEASSNLSRYDGVGYGYRKPGKNLIEMYINTRSSGFGEEVKRRIMLGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD+ YL+A K+RTL+K +F EA++ DVI+ P +AF G ++ + Sbjct: 361 YVLSAGYYDAFYLKALKVRTLLKNEFEEAYKT-CDVIVAPAASGTAFKFGAFKD---PLS 416 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+ G PAIS+P + MPLG+QLIG EET+ E+ Sbjct: 417 LYMEDICTVPANLIGAPAISIPVGY-KDGMPLGMQLIGPALGEETILRAAYTFEQ 470 >gi|187934869|ref|YP_001884646.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium botulinum B str. Eklund 17B] gi|229485872|sp|B2TIZ9|GATA_CLOBB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|187723022|gb|ACD24243.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum B str. Eklund 17B] Length = 485 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 210/492 (42%), Positives = 318/492 (64%), Gaps = 12/492 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M N+ A E ++ + K+ S E+ ++++ ++N + ++NA++ + ++A A+ D Sbjct: 1 MDFTNYKA-HELKNLISKKEASVEEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALD 59 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +++ G D L G P+GIKD + K + S IL+G+ Y++TV++ + G V+L Sbjct: 60 EKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVIL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSS E S Y +PW +D PGGSSGGS+AAVA ++GTD Sbjct: 120 GKLNMDEFAMGSSTENSAYKITRNPW-DLDRV----PGGSSGGSAAAVASKEVPLALGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF G VG+KPTYGR SR G++++ +LDQ G + R V+D A+L + I+G D Sbjct: 175 TGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVKDCALLTQVISGVD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T N+ VP+YE +L ++I+G + +PKE+ D L P + K + K GA+I Sbjct: 235 HRDFTTANINVPNYENSLSENIKGKKIALPKEFFKDGLDPKVQKAIYDALEVFKANGAEI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 E+SLP YA+ AYY+++ AEASSNLAR+DGVRYG R E +D +++Y +RS FG+E Sbjct: 295 TEVSLPLADYAISAYYLLACAEASSNLARFDGVRYGHRSESVEDAVDVYFKSRSEAFGKE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTY LS+ YD++Y +A K+R LIK +F F+ D I++PT PT A+ +G+ Sbjct: 355 VKKRIMLGTYALSAGYYDAYYKKALKVRNLIKGEFENIFKD-FDAIISPTAPTPAYKIGE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N+ M D++TV VN+AG+PAIS+P + + +P+GLQ++G F+E+TLF++ Sbjct: 414 KTENALEM--YLGDIYTVPVNIAGIPAISLPCGVAD-GLPVGLQIMGNYFKEDTLFNLAY 470 Query: 479 IIEKEAGYFRPH 490 E+ + H Sbjct: 471 SYEQSTKWHEMH 482 >gi|15675615|ref|NP_269789.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pyogenes M1 GAS] gi|20454931|sp|Q99YC0|GATA_STRP1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|13622822|gb|AAK34510.1| putative Glutamyl-tRNA Gln amidotransferase subunit A [Streptococcus pyogenes M1 GAS] Length = 488 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 206/486 (42%), Positives = 293/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L +K+ISA EL + ++ I++ + ++I V + A A D + Sbjct: 3 FNHKTIEELHDLLVAKEISATELTQATLEDIKSREEAVGSFITVSEEVALKQAAAIDAKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TK I T A S +L + P + +T + +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTKEILTTAASKMLYNYEPIFNATSVANAYAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DA Sbjct: 177 IRQPAAFNSVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + DY + + I+GM + +PKEY + + P I +T + + GA + E+S Sbjct: 237 TSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLASVKQFEALGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PTTPT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFAD-YDLILGPTTPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYAEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 VTDYHK 478 >gi|332969145|gb|EGK08177.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Kingella kingae ATCC 23330] Length = 482 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/474 (45%), Positives = 300/474 (63%), Gaps = 9/474 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + ++ + L++K ISAVEL Y+ AI+ N+ +N YI + K A AE +D +I G+A Sbjct: 6 LKQASELLQTKQISAVELATEYLNAIDAQNATINGYITLERDKTLAEAEAADAKIAAGNA 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD F G T S +LD F Y +TV Q L D G V LG+ NMDEFA Sbjct: 66 HALTGVPVAFKDIFCQTGWRTACASKMLDNFIAPYTATVVQNLLDVGMVTLGRTNMDEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE S+YG V +P+ SSGGS+A V L ++G+DTGGSIRQPA Sbjct: 126 MGSTNENSFYGAVHNPFNHGHVAGG-----SSGGSAAVVGARLAPVALGSDTGGSIRQPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G G+KPTYG SR G+I++A S DQAG + +T D AILL +A +DE D+T + Sbjct: 181 SHCGITGLKPTYGMVSRFGMIAYASSFDQAGPMAQTAEDCAILLNQMASFDERDSTSLER 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R L+Q ++G+ VG+PKEY + S + + + L+ GA++VE+SLP T+ Sbjct: 241 EREDYTRDLNQPLKGLKVGLPKEYFTNNNSADVQAALENAKTLLQQQGAELVEVSLPQTE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+++ AEAS+NL+RYDGVRYG R + ++ EMY NTR+ GFG EVK RIMIGT Sbjct: 301 LSIPAYYVLTSAEASTNLSRYDGVRYGHRAAQFGNLDEMYSNTRTEGFGSEVKRRIMIGT 360 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+K+R L+ DF AF + DVIL P PT+A L N + Sbjct: 361 YVLSHGYYDAYYLKAQKLRRLVANDFQAAFAK-CDVILAPNAPTAAPALNSL--NQDPVQ 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D++T+AVN+AGLPA+S+PA + +P+G+QLIG F E + ++ Sbjct: 418 AYLSDIYTIAVNLAGLPALSLPAGMGADGLPIGVQLIGNYFSEAKILGTAHQMQ 471 >gi|329122127|ref|ZP_08250735.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dialister micraerophilus DSM 19965] gi|327466934|gb|EGF12450.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dialister micraerophilus DSM 19965] Length = 484 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 214/475 (45%), Positives = 304/475 (64%), Gaps = 11/475 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +L +KDISAVEL I N + +++A++ ++A AAE D +I +G+ Sbjct: 7 IHELHKKLVNKDISAVELTKKMIANRNNVDGKIHAFLSTNDERALQAAERVDNKIKSGEV 66 Query: 69 -RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 ++ GIP IKD KG+ A S +L+ F P Y +TV ++L V LGK N+DEF Sbjct: 67 ISEIAGIPGAIKDNICIKGLPCTAASKMLENFIPPYNATVIEQLEKQDYVSLGKTNLDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S +G ++P + ++ PGGSSGGS+AAVA ++G+DTGGS+RQP Sbjct: 127 AMGSSTENSAFGKTLNPLNT-----EYVPGGSSGGSAAAVAANEVVWALGSDTGGSVRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASFTG VG+KPTYG SR G+++FA SLDQ G IT+ V D+AI+L +IA YD+ D+T + Sbjct: 182 ASFTGLVGLKPTYGLVSRYGLLAFASSLDQIGPITKDVTDAAIVLNSIAAYDKKDSTSIP 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY++AL ++G+ +G+ KE+ + + ++ +S+ + GA+IV+ISLPH Sbjct: 242 QEKKDYKKALISDVKGLRIGVAKEFFGKGIKEETKEAIKKALSFYEKEGAEIVDISLPHI 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + YYII+PAEASSNL+RYDGV YG R GK+++EMY NTRS GFG+EVK RIM+GT Sbjct: 302 SACVSIYYIIAPAEASSNLSRYDGVGYGYRKPGKNLIEMYINTRSSGFGEEVKRRIMLGT 361 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD+ YL+A K+RTL+K +F EA++ DVI+ P +AF G ++ + Sbjct: 362 YVLSAGYYDAFYLKALKVRTLLKNEFEEAYKT-CDVIVAPAASGTAFKFGAFKD---PLS 417 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+ G PAIS+P + MPLG+QLIG EET+ E+ Sbjct: 418 LYMEDICTVPANLIGAPAISIPVGY-KDGMPLGMQLIGPALGEETILRAAYTFEQ 471 >gi|149277486|ref|ZP_01883627.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pedobacter sp. BAL39] gi|149231719|gb|EDM37097.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pedobacter sp. BAL39] Length = 472 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 200/475 (42%), Positives = 291/475 (61%), Gaps = 10/475 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 + ++SE + + K + EL+D Y + IE ++ +NA+ EV ARA AE +++ Sbjct: 3 KYNSLSEIQSLIAQKKVRLTELLDHYFKQIE-THQHLNAFNEVFFYSARAQAEAVQEKLD 61 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G A L G+ IGIKD +G A S +L+GF Y +TV ++L A+++G+LN Sbjct: 62 QGTAGKLAGMVIGIKDNICYQGHEVTASSKMLEGFVSPYSATVVERLLAEDAIIIGRLNC 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG SNETSYYGPV + + GGSSGGS+ AV +C +++GTDTGGS+ Sbjct: 122 DEFAMGGSNETSYYGPVKNA-----ANPALVAGGSSGGSAVAVQADMCLSALGTDTGGSV 176 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G +G+KPTYGR SR G+I++A S DQ G IT +V D+A LL+ +AG DE D+T Sbjct: 177 RQPAAFCGAIGMKPTYGRISRYGVIAYASSFDQVGTITSSVSDAATLLEVLAGADEADST 236 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 LPVP+Y L S + + + L P I K + K G + +S Sbjct: 237 VSRLPVPEYNLGLQLSSPKKIAVLKETLESEALDPEIKKAILAAVERFKSQGHTVEYVSF 296 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRI 363 Y +PAYY+++ AEASSNL+RYDGV YG R +E K + ++Y+ +R+ GFG+EVK RI Sbjct: 297 DLLDYLVPAYYVLTTAEASSNLSRYDGVHYGHRNLEAKQLNDLYKMSRTEGFGEEVKRRI 356 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GT+VLS+ YD++Y +A+++R LI R+ EA DV+L+P TPT F +G EN Sbjct: 357 LLGTFVLSAGYYDAYYQKAQQVRRLI-REKMEAMLMDYDVVLSPVTPTPPFKIG--ENIE 413 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D+FTV ++ G+PAI++P +PL LQL+ + F E+ LFS+ Sbjct: 414 DPLVMYMADIFTVLASLTGIPAIAIPLGNNSAGLPLSLQLMAKHFGEQELFSLSH 468 >gi|317506704|ref|ZP_07964489.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Segniliparus rugosus ATCC BAA-974] gi|316255003|gb|EFV14288.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Segniliparus rugosus ATCC BAA-974] Length = 500 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 217/500 (43%), Positives = 308/500 (61%), Gaps = 19/500 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E+ + + S+++S+ E+V +++ I + +++A++ V ++A A+A D Sbjct: 7 MEEITTSTAAALAGLIHSRELSSAEVVQAHLDRIGAVDERLHAFLHVAGEEALASARAVD 66 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + G+A L G+PI +KD F T + T A S L+G+R Y++TVT +L G + Sbjct: 67 ESLARGEAPASPLAGVPIALKDIFTTTDMPTTAGSKFLEGWRSPYDATVTARLRAAGLPI 126 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N DEFAMGSS E S YGP +PW TPGGS GG+SAA+A F ++GT Sbjct: 127 LGKTNTDEFAMGSSTENSAYGPTRNPWDL-----SRTPGGSGGGNSAALAAFEAPLAVGT 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ TGTVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+ Sbjct: 182 DTGGSIRQPAALTGTVGVKPTYGTVSRYGMIACASSLDQGGPGARTVLDAALLHEVIAGH 241 Query: 239 DECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D T VP A ++G+ VGI KE D P ++ + ++ Sbjct: 242 DPKDGTSTKRTVPSVVEAARAGATGDLKGLKVGIVKELHGDGYQPGAYAAFEAAVKQVQA 301 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGK-DILEMYENTR 351 GA+ VE+S PH +A+PAYY+I P+E SSNLAR+DG+RYG RV +G+ D+ + +R Sbjct: 302 LGAEAVEVSCPHFPFAMPAYYLILPSEVSSNLARFDGIRYGNRVGDDGRADVAAVMTASR 361 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S GFG EVK RI+IGTY LS+ YD+ Y +A+K+R L+ RDF A+EQ VDVIL PTTPT Sbjct: 362 SAGFGPEVKRRIIIGTYALSAGYYDAFYGQAQKVRALVARDFERAYEQ-VDVILAPTTPT 420 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 +AFPLG+ ++ +M D+ T+ N+AG P +SVPA + +P+GLQ++ + Sbjct: 421 TAFPLGERADDPVAMYRF--DLCTIPTNLAGHPGMSVPAGFSSDDGLPVGLQILAPALAD 478 Query: 471 ETLFSVGQIIEKEAGYFRPH 490 + L+ VG E G PH Sbjct: 479 DRLYRVGAAYEAARGAL-PH 497 >gi|94264763|ref|ZP_01288542.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [delta proteobacterium MLMS-1] gi|93454809|gb|EAT05062.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [delta proteobacterium MLMS-1] Length = 487 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 224/491 (45%), Positives = 317/491 (64%), Gaps = 12/491 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ M + + L +D S++E ++ + +E ++NAYI V ARAAA +D++ Sbjct: 2 DLSAMTIGQLAQGLARRDFSSLEATEAVLARLETVGKKVNAYITVDGDGARAAAAAADRQ 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+A L G+P+ +KD T+G+ T S IL+ F P Y++TV +L GAV++GK Sbjct: 62 RASGEAPPLGGVPLALKDVLCTRGMRTTCGSRILENFVPPYDATVVARLRRAGAVLIGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 MDEFAMGS+NE +PW +D + GGSSGGS+AAVA LCA ++GTDTGG Sbjct: 122 TMDEFAMGSANENCALAVPHNPW-DLD----YICGGSSGGSAAAVAADLCAGALGTDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYGR SR G+++FA SLDQ G +T+ V D+A+LL +AG+D D Sbjct: 177 SIRQPASHCGVVGLKPTYGRISRYGLLAFASSLDQIGPLTKDVYDAALLLTLLAGHDRRD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + PVPDY AL ++G+ +G+P+EY L + K + I L++AGA++ EI Sbjct: 237 STSMAEPVPDYTAALADGVRGLKIGLPREYFAIGLDDEVKKLTEAAIKQLEEAGAELCEI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKH 361 SLPHT+Y + AYYII+PAEASSNLARYDGVR+G R E D +L MYE +RS GFG EVK Sbjct: 297 SLPHTEYGVAAYYIIAPAEASSNLARYDGVRFGHRDEQADELLAMYERSRSQGFGMEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI+IGTY LSS Y+++Y +A ++R LI D+ AF D++++P TPT+A+PL + Sbjct: 357 RIIIGTYALSSGYYEAYYRKASQVRALIIEDYRRAFAD-CDLLVSPVTPTTAWPL---NS 412 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S + +D+ T+ N+AGLP +S+P +P+GLQL FRE+ L +E Sbjct: 413 KSDPLSVYLSDILTIPANLAGLPGLSLPCGFSGAGLPVGLQLQANHFREDLLLRAAAELE 472 Query: 482 KE--AGYFRPH 490 + G RP Sbjct: 473 RRLAGGQRRPE 483 >gi|189219704|ref|YP_001940345.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Methylacidiphilum infernorum V4] gi|229485876|sp|B3DWT4|GATA_METI4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189186562|gb|ACD83747.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Methylacidiphilum infernorum V4] Length = 494 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/482 (44%), Positives = 313/482 (64%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++V E R L K++S +E+V++ + I + ++ AYI + ++A A++++D + Sbjct: 6 LSVKELRRLLVQKEVSPLEVVENLLCRIAEVDPKIFAYIYLNHERALEASKKADISL--- 62 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P+ IKD G + S IL+G+ Y+STV +KL GA++LG+ NMDE Sbjct: 63 ---PLGGVPVAIKDNINVLGEPCRCASRILEGYLAPYDSTVIEKLKKAGAILLGRTNMDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S G +PW + + PGGSSGGS+AAVA ++G+DTGGSIRQ Sbjct: 120 FAMGSSTENSSVGITRNPWNT-----ERVPGGSSGGSAAAVAAHEAFCALGSDTGGSIRQ 174 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+ +FA SLDQ G IT+TV D+A+LL+ I+G+D D T Sbjct: 175 PAAFCGCVGLKPTYGRVSRYGLTAFASSLDQIGPITKTVEDAALLLEVISGFDPFDNTSE 234 Query: 247 NLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 LPVP + L+ + ++ +GIPKEY ++ + + + Q I + G KI E+SLP Sbjct: 235 KLPVPRFSELLENRPLKDFVLGIPKEYFIEGIDGEVRQALSQVIGHYEKLGVKIEEVSLP 294 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT YA+ YYI++ AEAS+NLAR+DG+RYG R + D+++ Y TR GFG EVK RI+ Sbjct: 295 HTPYAVATYYILATAEASANLARFDGIRYGKRAKNYNDLIDYYGKTRDEGFGSEVKRRIL 354 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTYVLSS YD++YLRA K++ IK+DF+ AF Q +LTPT+P AF +G E S Sbjct: 355 LGTYVLSSGYYDAYYLRALKVKEKIKQDFSLAF-QKCQALLTPTSPFCAFRIG--EKTSD 411 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + D+FT+AVN+AG+ A+S+P + +P+G QLIG ++EET+ ++G I +K Sbjct: 412 PLQMYLADIFTIAVNLAGICALSIPCGRSTEGLPIGFQLIGPAWKEETILALGYIYQKTT 471 Query: 485 GY 486 G+ Sbjct: 472 GW 473 >gi|302387682|ref|YP_003823504.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium saccharolyticum WM1] gi|302198310|gb|ADL05881.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium saccharolyticum WM1] Length = 498 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 199/478 (41%), Positives = 299/478 (62%), Gaps = 10/478 (2%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 ++++S ++++VE V + + I+ +N+Y+ + + A A++ K+I NG+ L Sbjct: 16 EKIKSGEVTSVEAVKAALGQIKAMEPVLNSYVTIAEEDALRQAKDVQKQIENGELTGPLA 75 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD +G+ T S IL F P Y ++ + L GAV+LGK NMDEFAMGS+ Sbjct: 76 GVPVAVKDNICIQGMKTTCGSKILSDFVPSYTASAVENLKKAGAVILGKTNMDEFAMGST 135 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETS YG +PW PGGSSGGS AAVA C ++G+DTGGSIRQPASF G Sbjct: 136 TETSAYGVTRNPWNP-----DHVPGGSSGGSCAAVAAAECFYALGSDTGGSIRQPASFCG 190 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPTYG SR G+I++ SLDQ G + + V D A +L+ +A +DE D+T V D Sbjct: 191 VTGLKPTYGTISRYGLIAYGSSLDQIGPVAKDVTDCAAILEVLASHDEKDSTSVERNDCD 250 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + +AL + ++GM +GIP +Y L P + + + L + GA + L +YA+P Sbjct: 251 FTQALKEDVKGMRIGIPADYLGQGLDPEVKEAVLKAAGVLVEKGAIVETFDLGMVEYAIP 310 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLS 371 AYY+I+ AEASSNL+R+DGV+YG R + + L MY+ +RS GFG EVK RIM+G++VLS Sbjct: 311 AYYVIASAEASSNLSRFDGVKYGYRAKDYEGLHGMYKKSRSQGFGPEVKRRIMLGSFVLS 370 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++YL+A + + LIK+ F +AF DVIL P +P++A LG E+ S + Sbjct: 371 SGYYDAYYLKALRTKALIKKAFDQAFSV-YDVILGPASPSTAPKLG--ESLSDPLKMYLG 427 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 D++T++VN+AGLP ++VP + + +P+G+Q IG F+E+ + G +E+ Y P Sbjct: 428 DIYTISVNLAGLPGLTVPWSRDTRGLPIGVQFIGDCFKEKNIIKAGFALEQSRSYEMP 485 >gi|317132070|ref|YP_004091384.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ethanoligenens harbinense YUAN-3] gi|315470049|gb|ADU26653.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ethanoligenens harbinense YUAN-3] Length = 486 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 219/481 (45%), Positives = 301/481 (62%), Gaps = 9/481 (1%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + E+ L +++ISA EL D+ + IE + + AY+ V + A A + +R Sbjct: 2 ELWKLGAREAGRLLAAREISAPELTDALLTRIEGVDGKTGAYVTVCPELAEKQAAAAQER 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + +G++ L G+P GIKD T G T S +L+ F P Y++TV +KL GAV LGKL Sbjct: 62 LDDGESGALLGVPGGIKDNICTSGATTTCSSKMLEHFTPPYDATVVEKLGAAGAVTLGKL 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMG S ETSY+ +PW D T PGGSSGG++ AVA ++G+DTGG Sbjct: 122 NMDEFAMGGSTETSYFKKTANPW---DLTR--VPGGSSGGAAVAVAAGEAPFALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA+F G VG+KPTYG SR G+++FA SLDQ G ITR V D+A++L AI G D D Sbjct: 177 SIRQPAAFCGVVGLKPTYGAVSRYGLVAFASSLDQIGPITRNVEDTAVVLDAICGRDAHD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + P Y L + I+GM + +PKEY D L+P++ L+ GA E+ Sbjct: 237 STSADYAHPSYTATLGKGIKGMKIALPKEYLGDGLAPSVKHAILAAAKELEKLGAVCEEV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 SLP T+YA+PAYY+IS AEASSNLARYDGV+YG +G K + ++ TR GFG+EVK Sbjct: 297 SLPATEYAVPAYYLISSAEASSNLARYDGVKYGFAADGCKTLAQLVTRTRDEGFGREVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTY LS+ YD++Y +A ++R +IK F F D+IL PT PT+A+ LG++ Sbjct: 357 RIILGTYALSAGYYDAYYKKALQVRRIIKNGFDSVFAD-YDLILGPTAPTTAYKLGEKSG 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + SM D++TV VN+AGLPA+S+ E +P+G+QLIG F E L E Sbjct: 416 DPLSM--YLGDIYTVPVNIAGLPALSINCGYDEDGLPIGMQLIGPAFGEPALLQAAYAYE 473 Query: 482 K 482 + Sbjct: 474 Q 474 >gi|294786704|ref|ZP_06751958.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Parascardovia denticolens F0305] gi|315226319|ref|ZP_07868107.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Parascardovia denticolens DSM 10105] gi|294485537|gb|EFG33171.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Parascardovia denticolens F0305] gi|315120451|gb|EFT83583.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Parascardovia denticolens DSM 10105] Length = 512 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 216/482 (44%), Positives = 307/482 (63%), Gaps = 18/482 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ S+ D+L + ++S+ ELVD++ IE + ++A++ V ++A A+ +DKR Sbjct: 10 ELVQLSASQMADKLAAGEVSSRELVDAHFDVIEAAEGDIHAFLTVSKEQAYGQADAADKR 69 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G D L G+PI IKD T+GI T A S IL G+ P Y++TV +KL G +LGK Sbjct: 70 RAAGEDLAPLTGVPIAIKDMIVTQGIETTAASKILKGWVPPYDATVIEKLKKAGMPILGK 129 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFA GSS E S +GP +PW TD+ PGGS GGS+AAV F ++GTDTG Sbjct: 130 TNLDEFAQGSSTEYSAFGPTKNPW----DTDR-VPGGSGGGSAAAVGAFEAPLALGTDTG 184 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G +TRTV D+A+L + I GYD Sbjct: 185 GSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVTRTVMDAALLQEVIGGYDPK 244 Query: 242 DATCVNLPVPDYE----RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T + PVP + + GM +G+ KE P ++ + + + L+ GA Sbjct: 245 DSTSIPRPVPALSAQAAEGRRRDLTGMRIGLVKELGGGGFQPGVEARFNEAVDELRAMGA 304 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-----EMYENTRS 352 ++ E+SLPH +YAL AYY+I P+E SSNLARYDG+RYGLRV D + M TR Sbjct: 305 EVTEVSLPHAEYALAAYYVIMPSEVSSNLARYDGMRYGLRVMPPDDVRQTSANMMAYTRE 364 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AF+Q VDV+++PT+P++ Sbjct: 365 AGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFDQ-VDVLVSPTSPST 423 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AF G++ +N M ND+ T+ N+AG+PA+S+P L + +P+G Q I +++ Sbjct: 424 AFKFGEKMDNPLEM--YVNDIATIPANLAGVPAMSIPCGLSDDGLPVGFQFISHQMQDDV 481 Query: 473 LF 474 ++ Sbjct: 482 MY 483 >gi|171912451|ref|ZP_02927921.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Verrucomicrobium spinosum DSM 4136] Length = 482 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 309/488 (63%), Gaps = 19/488 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++ R +L SK+I+ ++V + +IE + + AY+ V A++A A A +D Sbjct: 3 LAAQSIASLRKQLLSKEITPTDIVKDVLASIEKQDPTLKAYLSVDAERALADAANADI-- 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKL 122 ++ L GIPIGIKD KG S L + + Y +T +L GA+ LG+L Sbjct: 61 ----SKPLGGIPIGIKDNINVKGAPCTCASKFLAENYTSPYNATCVNQLHAAGALTLGRL 116 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS E S + +PW + + PGGSSGGS++AV G + A++G+DTGG Sbjct: 117 NMDEFAMGSSTENSAFFASRNPWDT-----ERVPGGSSGGSASAVGGDIAIAALGSDTGG 171 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQP++F G VG+KPTYGR SR G+++FA SLDQ G IT+TV D+A++L + G D D Sbjct: 172 SIRQPSAFCGCVGLKPTYGRVSRYGLVAFASSLDQIGPITKTVEDAALVLNHLCGKDGRD 231 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++ VPD+ L Q I+G+ G+PKEY +D + I + I+ ++ G + EI Sbjct: 232 STSLDATVPDFTTGLGQDIKGLRFGLPKEYLVDGVDARIRSAVETAITHIQGLGGIVEEI 291 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 SLPHT + YY+I+PAEAS+NL+R+DGVRYG R E D+L+ Y TR+ GFG EVK Sbjct: 292 SLPHTDVGIATYYVIAPAEASTNLSRFDGVRYGHRAENTTDVLDHYLTTRAEGFGPEVKR 351 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLSS YD++Y++A+K RTLI++DF EAF++ VD++L+PTTP F LG + Sbjct: 352 RILLGTYVLSSGYYDAYYVKAQKARTLIRKDFDEAFKK-VDIVLSPTTPELPFKLGAHSD 410 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK---KMPLGLQLIGQPFREETLFSVGQ 478 + S+ D+FT+ N+AGLP ISVP E +P+GLQ++G+ E TL Sbjct: 411 DPLSI--YLADLFTIPANLAGLPGISVPCGFVEDGGTALPVGLQMVGRALDEVTLLRAAH 468 Query: 479 IIEKEAGY 486 E+ + Sbjct: 469 AYEQSTSW 476 >gi|256390519|ref|YP_003112083.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Catenulispora acidiphila DSM 44928] gi|256356745|gb|ACU70242.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Catenulispora acidiphila DSM 44928] Length = 502 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/473 (45%), Positives = 308/473 (65%), Gaps = 16/473 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +R+ +++A ++ +++ I + +++A++ V A+ A A A E D ++ G+ L G+ Sbjct: 21 IRNGEVTATDVAQAHLDRIAKVDEKVHAFLHVDAEGALAKAAEVDAKLARGERLGPLAGV 80 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F TKG+ T S IL G+ P Y++TVT++L + V+LGK NMDEFAMGSS E Sbjct: 81 PLALKDVFTTKGVPTTCGSKILQGWVPPYDATVTRRLREADIVILGKTNMDEFAMGSSTE 140 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S YG +PW D T PGGS GGSSA++A F +IGTDTGGSIRQPAS TGTV Sbjct: 141 NSAYGVTHNPW---DLTR--IPGGSGGGSSASLAAFEAPLAIGTDTGGSIRQPASVTGTV 195 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G+++F+ SLDQ G RTV D+A+L IAG+D D+T ++LPVPD Sbjct: 196 GVKPTYGGVSRYGLVAFSSSLDQGGPCARTVLDAALLHAVIAGHDPMDSTSIDLPVPDVV 255 Query: 255 RALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A +++GM +G+ K++ + + + + + + L+D GA +VE+ P YALPA Sbjct: 256 GAAKLANVEGMRIGVVKQFDGEGYQEGVRQRFHEAVQTLRDLGATVVEVDCPSFDYALPA 315 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYV 369 YY+I+P+E SSNLAR+D +RYGLRV G D + E+ TR GFG EVK RIM+GTY Sbjct: 316 YYLIAPSECSSNLARFDAMRYGLRV-GDDGVNGVEEVMALTREAGFGPEVKRRIMLGTYA 374 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD++Y A+++RTLI RDF AF VDV+++PTTPT+AF +G+ ++ M Sbjct: 375 LSSGYYDAYYGSAQQVRTLIMRDFDRAFAD-VDVLVSPTTPTTAFKIGERADD--PMAMY 431 Query: 430 YNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 D+ T+ NMAG +SVP L E +P+GLQ+I ++ L+ VG +E Sbjct: 432 LADLCTIPTNMAGNAGMSVPVGLAPEDGLPVGLQIIAPAMADDRLYRVGAAVE 484 >gi|28211983|ref|NP_782927.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium tetani E88] gi|39931529|sp|Q891I1|GATA_CLOTE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|28204426|gb|AAO36864.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium tetani E88] Length = 485 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 208/482 (43%), Positives = 318/482 (65%), Gaps = 11/482 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + E + ++ +K++ E+V SY+ IE +S++ A++ +++A A+E D + Sbjct: 2 ELYNLTAHELKTKIDNKEVKVEEVVQSYLNRIEKVDSKVGAFLYTGSEEAIKKAKELDNK 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G++ + L GIP+ IKD + KG+ S +L+G++ Y++ V +K+ + ++LGK Sbjct: 62 ISKGESLKALGGIPVSIKDNISVKGMQNTCASKMLEGYKSPYDAHVIEKIKNEDGIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 +NMDEFAMGSS E S Y +PW +D PGGSSGGS+AAVA ++GTDTG Sbjct: 122 VNMDEFAMGSSTENSAYKKTRNPW-DLDRV----PGGSSGGSAAAVAAMETPLALGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPA+F G VG+KPTYGR SR G I+F +LDQ G++++ V D A+L K IAG D Sbjct: 177 GSVRQPAAFCGLVGLKPTYGRTSRYGAIAFGSTLDQVGMLSKDVEDCALLTKNIAGLDHR 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T ++ VPDY + L + ++G +GIP+E + L ++ K + + LK+ GA+I E Sbjct: 237 DFTTADIKVPDYTQFLKKDLKGKKIGIPRECFGEGLDESVRKAINEALQVLKENGAEIEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 SLP YAL AYYIIS AEASSNLAR+DG+RYG R + D +++Y +R GFG+E K Sbjct: 297 FSLPSLDYALAAYYIISSAEASSNLARFDGIRYGHRTKDYTDAVDIYFKSRDEGFGKEAK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS YD++Y +A K+R LIK+++ F++ I++PT+PT AF +G++ Sbjct: 357 RRIMLGTYVLSEGYYDAYYKKALKVRNLIKKEYENVFKR-YHAIISPTSPTPAFKIGEKI 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+ +M I D +TV V++AGLPA+S+P + + +P+GLQ+IG ++E+ +F++ Sbjct: 416 NDILAMYLI--DAYTVPVSVAGLPAMSIPCGMVD-GLPIGLQIIGNYYKEDDIFNIAYSY 472 Query: 481 EK 482 E+ Sbjct: 473 EQ 474 >gi|315502325|ref|YP_004081212.1| glutamyl-tRNA(gln) amidotransferase, a subunit [Micromonospora sp. L5] gi|315408944|gb|ADU07061.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Micromonospora sp. L5] Length = 491 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 218/497 (43%), Positives = 308/497 (61%), Gaps = 17/497 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + E + S + SAVE+ +++ I + +++A++ V + A AAA D Sbjct: 1 MTDLTKLTAVEIAGLVASGETSAVEVTQAHLDRIGAVDDRVHAFLHVDTEGALAAARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G+ L G+P+ +KD TKG+ T S IL+G+RP Y+ST+ ++L D G VML Sbjct: 61 ERRAAGEELGPLAGVPVAVKDVLTTKGVPTTVGSKILEGWRPPYDSTIVERLRDAGTVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW + PGGS GGS+AA+A + SIG+D Sbjct: 121 GKTNMDEFAMGSSTEYSAYGPTRNPWDL-----ERIPGGSGGGSAAALAAYEAPLSIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G+++F+ SLD G RTV D+A+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGAKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHQVIGGHD 235 Query: 240 ECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVPD A + G+ +G+ E+ + P + ++ L Sbjct: 236 PRDSTSIPAPVPDVVAAARLGATGDLTGVKLGVVTEFTGEGAEPGVMAAFRDAAEALAKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRS 352 GA+IVE+S P+ +YALPAYY+I+P+E SSNLAR+DGVR+GLRV + + E+ TR Sbjct: 296 GAEIVEVSCPNFKYALPAYYLIAPSECSSNLARFDGVRFGLRVGDDGNRSLEEVMSLTRE 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIM+GTY LSS YD++Y +A+K+RTLI RDFT AFEQ VD +++PTTP Sbjct: 356 AGFGPEVKRRIMLGTYALSSGYYDAYYGQAQKVRTLITRDFTSAFEQ-VDALISPTTPFV 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AFP+G + M D+FT+ N+ G PAISVP L + +P+G Q++ ++ Sbjct: 415 AFPIGSRTADPYQM--YLADLFTIPTNLYGGPAISVPCGLSD-GLPVGFQIMAPTMADDR 471 Query: 473 LFSVGQIIEKEAGYFRP 489 ++ V +E G P Sbjct: 472 MYRVAAALENAVGMLTP 488 >gi|145593771|ref|YP_001158068.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Salinispora tropica CNB-440] gi|189045261|sp|A4X490|GATA_SALTO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|145303108|gb|ABP53690.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Salinispora tropica CNB-440] Length = 491 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 217/497 (43%), Positives = 309/497 (62%), Gaps = 17/497 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E + + SAVE+ +++ I + +++A++ V + A AA + D Sbjct: 1 MTDLTSFSAAELAGLVARGESSAVEVTQAHLDRISAVDDRVHAFLHVDTEGALDAARDVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+P+ +KD TKG+ T A S IL +RP Y+ST+ ++L G VML Sbjct: 61 SRRAAGEPLGPLAGVPVAVKDVLTTKGVPTTAGSKILADWRPPYDSTIVRRLRAAGTVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +GP +PW PGGS GGSSAA+A + SIG+D Sbjct: 121 GKTNMDEFAMGSSTEYSAFGPTHNPWDL-----SRIPGGSGGGSSAALAAYETPLSIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G+++F+ SLD G RTV D+A+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEVIGGHD 235 Query: 240 ECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVPD A + G+ +G+ +E+ + P + + + L Sbjct: 236 PLDSTSIPAPVPDVVAAARLGASGDLTGVRLGVVREFAGEGAEPGVLAAFHAAVETLTKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRS 352 GA++VE+S PH QYALPAYY+I+P+E SSNLAR+DGVR+GLRV +G + + E+ TR Sbjct: 296 GAEVVEVSCPHFQYALPAYYLIAPSECSSNLARFDGVRFGLRVGDDGIRSLEEVMSATRE 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK R+M+GTY LSS YD++Y +A+K+RTLI RDFT AFEQ VD +++PTTP Sbjct: 356 AGFGPEVKRRVMLGTYALSSGYYDAYYGQAQKVRTLISRDFTTAFEQ-VDALISPTTPFV 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AFP+G + M D+FT+ N+ G P ISVP L + +P+GLQ++ ++ Sbjct: 415 AFPVGARTADPYQM--YLADLFTIPSNLYGGPGISVPCGLAD-GLPVGLQVMAPTMADDR 471 Query: 473 LFSVGQIIEKEAGYFRP 489 ++ V +E G F P Sbjct: 472 MYRVAAALESVVGPFTP 488 >gi|148235233|ref|NP_001080891.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Xenopus laevis] gi|82177180|sp|Q8AVG9|QRSL1_XENLA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|27503894|gb|AAH42285.1| Qrsl1-prov protein [Xenopus laevis] Length = 524 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 210/500 (42%), Positives = 291/500 (58%), Gaps = 24/500 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++ E+ LR + EL + I+ + S +NAYI + A A E+DKR G Sbjct: 4 MSLREAAAVLRLGQVKPTELCQKCLSLIKET-SFLNAYITITEDIALKQAAEADKRFAQG 62 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +L+GIPI IKD F+T GI T S +L G+ Y +TV QKL+D GAV++GK N+D Sbjct: 63 KPLGELDGIPIAIKDNFSTAGIETTCASRMLKGYVAPYNATVVQKLFDQGAVLMGKTNLD 122 Query: 126 EFAMGSSNETSYYGPVISPWR---------------SMDSTDKFTPGGSSGGSSAAVAGF 170 EF MGS + S +GPV +PW + D +D GGSSGGS+ AV+ Sbjct: 123 EFGMGSGSTDSIFGPVRNPWSYSRSYIEKRPISHHAAKDDSDWVIAGGSSGGSACAVSAG 182 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 C +IG+DTGGS R PAS G VG+KPTYG SR G+I S+D GI+TR V D+A Sbjct: 183 TCYLAIGSDTGGSTRNPASHCGVVGLKPTYGLVSRHGLIPLVNSMDIPGILTRCVDDAAT 242 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +L +AG+D D+T V P + + + +GIPKEY LS I W + Sbjct: 243 VLGMLAGHDLYDSTTVQDPFQPFSLPETIDLSNLCIGIPKEYHAPGLSTEILSLWSKTAD 302 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYEN 349 L+ AGAK++E+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R + D E MY Sbjct: 303 LLEKAGAKVMEVSLPHTPYSIVCYHVLCTAEVASNMARFDGLEYGHRSDIDDSTEAMYAA 362 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GF V+ RI+ G Y L + Y+ ++++A+K+R LI DF + F GV V+LTPTT Sbjct: 363 TRREGFNDVVRGRILSGNYFLLKQNYEKYFVKAQKVRRLIADDFVKVFNSGVHVLLTPTT 422 Query: 410 PTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A P +E+N + S DVFT NMAGLPA++VPA L + +PLGLQ IG+ Sbjct: 423 LGDAAPYLEFIQEDNRTRSA---EEDVFTQCTNMAGLPAVTVPAGLSSRGLPLGLQFIGR 479 Query: 467 PFREETLFSVGQIIEKEAGY 486 F E L +V + EK+ + Sbjct: 480 AFCERQLLTVAKWCEKQMDF 499 >gi|168334877|ref|ZP_02692999.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 472 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 210/475 (44%), Positives = 310/475 (65%), Gaps = 10/475 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 VSE L+ K IS+VE+ Y+ I+ + ++ A++ V ++A AA+ +D I G+A Sbjct: 4 VSELSKMLKDKKISSVEVTTEYLAKIDAKDKEIEAFLLVTKEEAMEAAKLADATIAAGNA 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP IKD TKGI T S +L+ F P Y++ V +KL VMLGKLNMDEFA Sbjct: 64 TTLTGIPCAIKDNMCTKGIRTTCGSKMLEDFIPEYDAFVIKKLKAAETVMLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S++ +P ++++ PGGSSGGS+AAVA + ++G+DTGGSIRQPA Sbjct: 124 MGSSNENSHFHITKNP-KNLERV----PGGSSGGSAAAVAADMAVFTLGSDTGGSIRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYG SR G+++FA S DQ G +T TV+DSA++L AI G+D+ D+T Sbjct: 179 SFCGVVGMKPTYGSISRNGLVAFASSFDQIGPLTHTVKDSAMVLNAIVGHDKGDSTSRVY 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY + L++ ++G + +PKEY D + + + I + GA + ++S+P Sbjct: 239 KYEDYTKDLEKGVRGXKLAVPKEYLEGDAIQAEVKEAIVAAIKEYEKMGAVVKKVSMPSL 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + ALPAYY+IS AEASSNL+R+DGVRYG R + ++I ++Y+ +RS GFG EVK RIM+G Sbjct: 299 KLALPAYYVISSAEASSNLSRFDGVRYGYRTDDYENIEDLYKKSRSEGFGAEVKRRIMLG 358 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LS+ YD++Y +A ++R LIK++F E F+ I++P PT+A+ LG++ N M Sbjct: 359 TFALSAGYYDAYYKKAVEVRALIKQEFDEVFKDS-SAIISPVAPTTAYKLGQKTKNPLEM 417 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 D+++V VN+AG+PAIS+P + +++P+G+QLIG F E L+ + E Sbjct: 418 --YMGDIYSVPVNIAGVPAISIPCGVDSEELPIGMQLIGNMFSEALLYQIANAYE 470 >gi|266622511|ref|ZP_06115446.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium hathewayi DSM 13479] gi|288865766|gb|EFC98064.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium hathewayi DSM 13479] Length = 527 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 209/506 (41%), Positives = 302/506 (59%), Gaps = 29/506 (5%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ AV + +++ K+++ E + + IE S ++ Y+ + +KA A E K+I Sbjct: 7 LSLTAVQLGK-KIKEKEVTCEEALTAVFAQIERQESSLHCYVTLEKEKALKQAREIQKKI 65 Query: 64 INGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G A L G+P +KD +G+ T S IL+ F P Y + + L GAV++GK Sbjct: 66 DEGQLAGPLAGVPAAVKDNMCIEGMRTTCSSKILENFVPTYTAEAVENLRKAGAVIIGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGS+ ETS +G +PW +TD PGGSSGGS AAVA C ++G+DTGG Sbjct: 126 NMDEFAMGSTTETSAFGVTRNPW----NTD-HVPGGSSGGSCAAVAANECFYALGSDTGG 180 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQP+SF G G+KPTYG SR G+I++ SLDQ G + + V D A++L+A+A +D D Sbjct: 181 SIRQPSSFCGVTGLKPTYGTISRYGLIAYGSSLDQIGPVAKDVTDCAVILEALASHDAKD 240 Query: 243 ATCVNLPV------------------PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 +T V+ D+ AL + GM +GIP +Y + L P + + Sbjct: 241 STSVDREAVMRQKMEQGAAGWTSNGGCDFTSALVDDVTGMRIGIPGDYLGEGLDPEVKEA 300 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 + L++ GA + E L +YA+PAYY+I+ AEASSNL+R+DGV+YG R + D L Sbjct: 301 VLKAAEVLREKGASVEEFDLGMAEYAIPAYYVIASAEASSNLSRFDGVKYGFRAKEYDGL 360 Query: 345 -EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 +MY+ +RS GFG EVK RIM+G++VLSS YD++YL+A + + LIK+ F AFE+ DV Sbjct: 361 HDMYKKSRSQGFGPEVKRRIMLGSFVLSSGYYDAYYLKALRTKALIKKAFDRAFEK-YDV 419 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 IL P +P +A LG E+ S + D++T++VN+AGLP ISVP +P+GLQL Sbjct: 420 ILGPASPATAPKLG--ESLSDPLKMYLGDIYTISVNLAGLPGISVPCGKDSGGLPIGLQL 477 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 IG F+E+ + G E+ Y P Sbjct: 478 IGDCFQEKNIIRAGYAFERSRSYEMP 503 >gi|251779645|ref|ZP_04822565.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083960|gb|EES49850.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 485 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 210/492 (42%), Positives = 317/492 (64%), Gaps = 12/492 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M N+ A E +D + K+ S E+ ++++ ++N ++++NA++ + ++A A+ D Sbjct: 1 MDFTNYKA-HELKDLISKKEASVEEVTKAHLENVKNIDAKVNAFLYIAEEEALNDAKVLD 59 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +++ G D L G P+GIKD + K + S IL+G+ Y++TV++ + G V+L Sbjct: 60 EKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVIL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNMDEFAMGSS E S Y +PW +D PGGSSGGS+AAVA ++GTD Sbjct: 120 GKLNMDEFAMGSSTENSAYKITRNPW-DLDRV----PGGSSGGSAAAVASKEVPLALGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPASF G VG+KPTYGR SR G++++ +LDQ G + R V+D A+L + I+G D Sbjct: 175 TGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVKDCALLTQVISGVD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T N+ VP+YE +L ++I+G + +PKE+ D L P + K + K GA+I Sbjct: 235 HRDFTTANINVPNYENSLSENIKGKKIALPKEFFKDGLDPKVQKAIYDALEVFKANGAEI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 E+SLP YA+ AYY+++ AEASSNLAR+DGVRYG R E +D +++Y +RS FG+E Sbjct: 295 TEVSLPLADYAISAYYLLACAEASSNLARFDGVRYGHRSESVEDAVDVYFKSRSEAFGKE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTY LS+ YD++Y +A K+R LIK +F F+ D I++PT PT A+ +G+ Sbjct: 355 VKKRIMLGTYALSAGYYDAYYKKALKVRNLIKGEFENIFKD-FDAIISPTAPTPAYKIGE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N+ M D++TV VN+AG+PAIS+P + + +P+GLQ++G F E+ LF++ Sbjct: 414 KTENALEM--YLGDIYTVPVNIAGIPAISLPCGVAD-GLPVGLQIMGNYFEEDILFNLAY 470 Query: 479 IIEKEAGYFRPH 490 E+ + H Sbjct: 471 SYEQSTKWHEMH 482 >gi|260557237|ref|ZP_05829453.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter baumannii ATCC 19606] gi|260409343|gb|EEX02645.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Acinetobacter baumannii ATCC 19606] Length = 492 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 220/479 (45%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + Q+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AVLKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|50084037|ref|YP_045547.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter sp. ADP1] gi|81613313|sp|Q6FDY3|GATA_ACIAD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|49530013|emb|CAG67725.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter sp. ADP1] Length = 492 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 219/479 (45%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E + L S+ EL Y+ I+ ++Q+ +Y+ V ++A A A+ +D Sbjct: 1 MTDLHRLSVRELAEGLGQAQFSSRELTQHYLNRIDKIDAQVKSYVTVTHEQALAQADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G+A L G+P+ KD F TKGI T A S +LD F Y +TV +K G V LG Sbjct: 61 ALRQAGNAGFLTGVPLAHKDIFCTKGIKTTAGSKMLDNFISPYNATVVEKANAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS++E+SY+G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KLNMDEFAMGSTSESSYFGATCNPW-ALDRV----PGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQ G + R+ D A L+ +AG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQS-IQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ + ++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKDVDDYVANLNATALKGLRIGIPKQYFNVAGLDAEVKARVEESLKKLEEMGAV 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLSMTESYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPVDLMDLYKRSRSEGFGA 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P L +P+GLQLIG + E L S+ Sbjct: 415 ADLT---PVEMYLGDIYTLAVNLAGLPAINAPVGLDSNNLPVGLQLIGNYWSESQLLSI 470 >gi|113866142|ref|YP_724631.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia eutropha H16] gi|122947219|sp|Q0KFF8|GATA_RALEH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|113524918|emb|CAJ91263.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferase subunit A [Ralstonia eutropha H16] Length = 501 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/495 (45%), Positives = 312/495 (63%), Gaps = 27/495 (5%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L ++ +SA EL Y+ IE + + +NA+I V A++ A A +D+R G+A L G Sbjct: 16 DALAARSVSAEELAREYLARIEQA-AALNAFIHVDAERTLAQARAADERRARGEAAPLTG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI KD F T+G A S +L + +++TV +++ G V LGK NMDEFAMGSSN Sbjct: 75 VPIAHKDVFVTRGWRATAGSKMLANYESPFDATVVERMAAAGMVTLGKTNMDEFAMGSSN 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S++GPV +PW + SSGGS+AAVA L A+ GTDTGGSIRQP+SF+G Sbjct: 135 ENSHFGPVRNPWDTSRVPGG-----SSGGSAAAVAAGLAPAATGTDTGGSIRQPSSFSGI 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV--- 250 GIKPTYGR SR G+I+FA SLDQAG + + D A+LL A+AG+D D+T + P Sbjct: 190 TGIKPTYGRVSRYGMIAFASSLDQAGPMAHSAEDCALLLNAMAGFDPRDSTSIT-PAQGG 248 Query: 251 --PDYERALDQ---------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DY R L Q + G+ +G+PKEY LS +++ + ++ + GA + Sbjct: 249 VDEDYTRLLGQPRAGATTERPLAGLRIGLPKEYFGKGLSADVEQAVRAALAEYEKLGATL 308 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQE 358 VE++LP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ GFG E Sbjct: 309 VEVTLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRAEGFGAE 368 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTYVLS YD++YL+A+KIR +I DF AF Q DVI+ P PT A+ LG+ Sbjct: 369 VKRRIMVGTYVLSHGYYDAYYLQAQKIRRIIADDFQRAFAQ-CDVIMGPVAPTVAWKLGE 427 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M D+FT++ ++AGLP +SVP E MP+GLQLIG F E L Sbjct: 428 KTSDPVQM--YLADIFTLSTSLAGLPGMSVPCGFGEAGMPVGLQLIGNYFDEARLLQTAH 485 Query: 479 IIEKEAGYF--RPHK 491 ++ + RP K Sbjct: 486 AFQQATDWHLRRPGK 500 >gi|281207325|gb|EFA81508.1| glutamyl-tRNA amidotransferase A subunit [Polysphondylium pallidum PN500] Length = 507 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 203/494 (41%), Positives = 301/494 (60%), Gaps = 26/494 (5%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKRII-- 64 ++S+ R L +++ +L+ + I+ + + NAYI + +K A+ESDKR+ Sbjct: 3 SLSQVRSLLVGGRVTSRQLIIDSLNRID-ATKKFNAYITLEDREKLLNDADESDKRLQHQ 61 Query: 65 -----NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +G R+LEGIPI +KD F+T + T S IL+ + P +++TV +L + GA+++ Sbjct: 62 QQQQQSGVKRELEGIPIAVKDNFSTSKLKTTCASKILENYIPSFDATVVSRLKEAGAIIV 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS T ++G I+P+ S D+ + GGSSGGS+ AV +A+IG+D Sbjct: 122 GKTNMDEFAMGSSTSTGHFGASINPY-SRDAGESLVAGGSSGGSAVAVKLNTVSAAIGSD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPA++ G +G KPTYG SR G+I+FA SLD G D+AILL + G D Sbjct: 181 TGGSVRQPAAYCGLLGFKPTYGSISRYGMIAFASSLDTPGFFVHNAVDAAILLDVLVGRD 240 Query: 240 ECDATCVNLPVPDY------ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D+T + P+ R +Q ++G+ GIP +Y + + P I W++ + ++ Sbjct: 241 CNDSTSIEHPMQKKFQQYLNSRDNNQDMKGLVFGIPTDYLVKEMDPEIINLWRETVDLIE 300 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRS 352 AG K+V + LPHT+YALPAYYI++ +EASSNLARYDG+RYG G K + + Y TRS Sbjct: 301 QAGGKVVAVDLPHTKYALPAYYILATSEASSNLARYDGIRYGASTSGAKSLKQQYMETRS 360 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPT 411 GFG EVK RI++GT LS YD++Y +A++IR L+ DF + F Q VD+++TPTTP+ Sbjct: 361 EGFGAEVKRRILLGTMSLSRGSYDNYYNKAQQIRRLVSDDFNQVFNRQSVDILITPTTPS 420 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-----MPLGLQLIGQ 466 F LG +N + ND+ T+ ++AGLP+ S+P A + PL LQLIG Sbjct: 421 GPFKLG---DNQDPIDMYINDIMTIPASLAGLPSASIPLAHSQSNNKSTPTPLSLQLIGN 477 Query: 467 PFREETLFSVGQII 480 ++ + Q I Sbjct: 478 RLQDHKVLEAIQKI 491 >gi|257054929|ref|YP_003132761.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Saccharomonospora viridis DSM 43017] gi|256584801|gb|ACU95934.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Saccharomonospora viridis DSM 43017] Length = 503 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 219/498 (43%), Positives = 324/498 (65%), Gaps = 23/498 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++ +E +++ S+++SA E+ +++ I +S++NA++ V A+ A AAA D Sbjct: 1 MTDLTRLSAAELAEKIHSREVSAEEVTKAHLDRITEVDSEINAFLHVDAEGALAAARAVD 60 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + NG+ A L G+P+ +KD F T+G+ T S L+ + P Y++TVT+KL + G + Sbjct: 61 ASLANGEQPASPLAGVPLALKDAFTTRGMPTTCGSRTLENWVPPYDATVTRKLREAGVPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S +GP ++PW D T GS GGS+A++A F +IGT Sbjct: 121 LGKTNMDEFAMGSSTENSAFGPTLNPW---DLTRVSG--GSGGGSAASLAAFEAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+ Sbjct: 176 DTGGSIRQPAALTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEIIAGH 235 Query: 239 DECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYR----LDYLSPTIDKTWQQGIS 290 D D+T +++PVP A Q + G+ VG+ +E R Y P + +++ ++ Sbjct: 236 DPLDSTSIDVPVPALAEAARQGGRGDLSGVKVGVVRELRELGGASY-QPGVVASFEAAVA 294 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGK-DILEMY 347 L++ GA++VEIS PH Y+L AYY+I+P+E SSNLAR+D +RYGLRV +G+ E+ Sbjct: 295 QLRELGAEVVEISCPHFPYSLSAYYLIAPSECSSNLARFDAMRYGLRVADDGEHSAEEVM 354 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 +R GFG EVK RIM+GTY LS+ Y+++Y A+K+RTL+ RDF AFEQ VDV+++P Sbjct: 355 AASREAGFGPEVKLRIMLGTYALSAGYYEAYYGSAQKVRTLVARDFMNAFEQ-VDVLVSP 413 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 TTPT+AF LG+ + D+ T+ N+AG A+SVP+ L + +P+GLQ++ Sbjct: 414 TTPTTAFRLGERAE---PLEMYLADLCTIPTNLAGNTAMSVPSGLSDDGLPVGLQIMAPA 470 Query: 468 FREETLFSVGQIIEKEAG 485 EE L+ VG E G Sbjct: 471 LAEERLYRVGAAYEAARG 488 >gi|300313942|ref|YP_003778034.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Herbaspirillum seropedicae SmR1] gi|300076727|gb|ADJ66126.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit protein [Herbaspirillum seropedicae SmR1] Length = 488 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 212/484 (43%), Positives = 313/484 (64%), Gaps = 17/484 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E +L+++ ISA EL ++ I+ S+ +NA++ V + A A+ +D R+ + Sbjct: 4 LTLKELSAQLQARKISATELATLFLDRIDASD--LNAFLHVDRELTLAQAKVADSRLSDN 61 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 +A L G+PI KD F T+G T A S +LD + +++TV ++ G V LGKLN DE Sbjct: 62 NAGQLTGVPIAHKDIFVTRGWRTTAGSRMLDNYVSPFDATVVEQFNAAGMVTLGKLNCDE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS NE SY+GP ++PW + PGGSSGGS+AAVA L A+ TDTGGSIRQ Sbjct: 122 FAMGSGNENSYFGPTLNPW-----DKRAVPGGSSGGSAAAVAARLAPAATATDTGGSIRQ 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G GIKPTYG SR G+I+FA SLDQ G I +T D +LL A+ G+DE D+T + Sbjct: 177 PASLCGVTGIKPTYGSVSRYGMIAFASSLDQGGPIAKTAEDCGLLLNAMTGFDERDSTSL 236 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P D+ R+L+ S+QG+ +G+PKE+ L+ ++ + +S + GA++VEISLP Sbjct: 237 QRPKEDFTRSLNDSLQGLRIGVPKEFFGAGLAADVEAAVRAALSEFEKLGAQLVEISLPK 296 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMI 365 T+ ++P YY+I+PAEASSNL+R+DGVRYG R + ++ +MY +R+ GFG+EVK RI++ Sbjct: 297 TELSIPVYYVIAPAEASSNLSRFDGVRYGHRAADYGNLDDMYRKSRAEGFGEEVKRRILV 356 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---EQGVDVILTPTTPTSAFPLGKEENN 422 G+YVLS YD++YL+A+KIR LI +DF A + DVI+ P +PT A+ LG + N+ Sbjct: 357 GSYVLSHGYYDAYYLQAQKIRRLIAQDFQNALAGANRQCDVIMGPVSPTVAWDLGDKTND 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREETLFSVGQ 478 + + D+FT++ ++AGLP +S+P + K P+GLQ+IG F E L +V Sbjct: 417 --PVANYLADIFTLSTSLAGLPGMSIPCGFGQGEKNGKRPVGLQIIGNYFDEARLLNVAH 474 Query: 479 IIEK 482 ++ Sbjct: 475 QFQQ 478 >gi|302874887|ref|YP_003843520.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium cellulovorans 743B] gi|307690496|ref|ZP_07632942.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium cellulovorans 743B] gi|302577744|gb|ADL51756.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium cellulovorans 743B] Length = 487 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 221/480 (46%), Positives = 299/480 (62%), Gaps = 11/480 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+ E R + K +A E+V I+ ++NAYI + + A AEE D+++ G Sbjct: 6 MSAEEIRRGIIDKLFTAKEIVTLLFDRIKAVEPKVNAYITICEEAALKRAEEIDEKVKTG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI IKD T GI T S +L+ F P Y +TV KL A+++GKLNMD Sbjct: 66 EPLGKLAGVPIAIKDNICTDGIKTTCASKMLEDFVPPYNATVINKLLKEDAIIIGKLNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S + +PW D T GSSGGS+AAVA + S+G+DTGGSIR Sbjct: 126 EFAMGSSTENSAFKNTCNPW---DLTRVPG--GSSGGSAAAVAAGIAPISLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G VG+KPTYG SR G+I+F SLDQ G +++TV DS + L+ I G D+ D+T Sbjct: 181 QPAAFCGVVGLKPTYGLVSRFGLIAFGSSLDQIGPLSKTVSDSVLALEVIEGDDDLDSTT 240 Query: 246 VNLPV-PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 V DY L + GM VG+PKE+ L P I++ I LK GA + EISL Sbjct: 241 YKDYVKKDYFSTLKDGVAGMKVGVPKEFFQSGLDPEINEAINNAIDKLKSLGAIVEEISL 300 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P T L AYYIIS AEASSNLAR+DGVRYG R E D+ E+ +R+ FG+EVK RI Sbjct: 301 PITSEGLSAYYIISSAEASSNLARFDGVRYGYRPNEFADVDELMLKSRTEAFGREVKRRI 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTY LSS YD++Y RA K++ IK +F E F++ D+I++P TPT AF +G EN+ Sbjct: 361 MLGTYALSSGYYDAYYNRAHKLKKKIKDEFIETFKK-YDLIISPVTPTPAFKIG--ENSG 417 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + D++T+ +N+AGLPA+S+P A+ + +P+G+QLIG F EET+F +E+E Sbjct: 418 DPLKMYLEDIYTINLNLAGLPAMSLPCAMSKSGLPIGIQLIGAHFAEETIFKAAYALEQE 477 >gi|182435811|ref|YP_001823530.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776436|ref|ZP_08235701.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces cf. griseus XylebKG-1] gi|178464327|dbj|BAG18847.1| putative glutamyl-tRNA amidotransferase subunit A [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656769|gb|EGE41615.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces cf. griseus XylebKG-1] Length = 500 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 220/487 (45%), Positives = 319/487 (65%), Gaps = 14/487 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S + + +E ++ S +++AVE+ ++++ I+ + +++A++ + + A A A D Sbjct: 4 ISTIIKLTAAEIAGKIASGELTAVEVTEAHLARIDAVDEKVHAFLHIDREGALAQARAVD 63 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR L G+P+ +KD F TK + T S IL+G+ P Y++T+T+KL V+L Sbjct: 64 AKREAGEKLGPLAGVPLALKDIFTTKDMPTTVGSKILEGWVPPYDATLTRKLRAADVVIL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A + +IGTD Sbjct: 124 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASYEAPLAIGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L +AIAG+D Sbjct: 179 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIAGHD 238 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+QGM VG+ K++R + + + + + + LK GA Sbjct: 239 PLDSTSIDAPVPPVVEAARNGSVQGMRVGVVKQFRGEGYQAGVLQRFDESVELLKSLGAD 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGF 355 +VE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV +G K E+ TR GF Sbjct: 299 VVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRVGDDGTKSAEEVTALTREAGF 358 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LSS YD++Y A+K+RTLI +DF +AFEQ VDVI++PTTPT+AFP Sbjct: 359 GDEVKRRIILGTYALSSGYYDAYYGSAQKVRTLITQDFEKAFEQ-VDVIVSPTTPTTAFP 417 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 +G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ Sbjct: 418 IGERADD--PMAMYLADLCTIPTNLAGNSAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLY 475 Query: 475 SVGQIIE 481 VG +E Sbjct: 476 KVGAAVE 482 >gi|311748056|ref|ZP_07721841.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Algoriphagus sp. PR1] gi|126575040|gb|EAZ79398.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Algoriphagus sp. PR1] Length = 475 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 198/476 (41%), Positives = 292/476 (61%), Gaps = 10/476 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F++ E + L K+ +V Y+ I+ + + +NA++EV Q A + A+ D+++ Sbjct: 4 FISFDEIKKSLEKKETDCRSIVQYYLTNIQ-TKAHLNAFVEVYEQSALSQADLIDQKLEE 62 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L G+ IGIKD +G + A S IL+ F + +T Q+L D A++LG+LN D Sbjct: 63 GKAGKLAGMVIGIKDVLCYEGHESNASSKILENFESQFTTTAIQRLIDEDAIILGRLNCD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGSSNE S +G V++ + + PGGSSGGS+ AV LC AS+GTDTGGS+R Sbjct: 123 EFGMGSSNENSAHGKVLNA-----ADESRVPGGSSGGSAVAVQANLCTASLGTDTGGSVR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+FTG +G+KPTY R SR G+I++A S D GI ++TV+D+A+LL+ +AG+DE D+T Sbjct: 178 QPAAFTGVIGMKPTYSRISRWGLIAYASSFDTIGIFSKTVKDNALLLEIMAGHDENDSTS 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y + L + + + L P I + LK G ++ E+ P Sbjct: 238 SRKPVFPYSQLLHFDKKAKVAFLKETLESPALQPEIKANTLAILEKLKSEGHEVKEVEFP 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIM 364 Y LP YYI++ AEASSNL+R+DGV+YG R LE MY+ TRS GFG EVK RIM Sbjct: 298 LLDYLLPTYYILTTAEASSNLSRFDGVKYGYRTPNAHNLESMYKLTRSEGFGDEVKRRIM 357 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+VLS+ +D+++ +A+K+R LIK ++TE D I+ PTTP++AF G+ + Sbjct: 358 LGTFVLSASYHDAYFTKAQKVRRLIK-EYTENLLNDFDYIIIPTTPSTAFKFGEHSGDPV 416 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +M D+FTV +++G+PAIS+P + MP+GLQ+I F+E LF+ + Sbjct: 417 AM--YLEDLFTVQASVSGVPAISIPNGKDAQGMPIGLQVICNSFKEAELFAFSNYL 470 >gi|319946382|ref|ZP_08020620.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus australis ATCC 700641] gi|319747535|gb|EFV99790.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus australis ATCC 700641] Length = 488 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/486 (43%), Positives = 296/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNHKTIEELHDLLVSKEISATELTQATLDDIKAREEAVNAFVTVAEEVALAQAKVIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDADNL-LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKSKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYGP + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGPTKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNVIASEDVKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|283852169|ref|ZP_06369442.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio sp. FW1012B] gi|283572395|gb|EFC20382.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio sp. FW1012B] Length = 488 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 213/484 (44%), Positives = 309/484 (63%), Gaps = 13/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ ++++E RD L + +I A E V + + IE + ++ A + + A+ A A D Sbjct: 1 MSEIVRLSLTEVRDTLAATEIKAEEAVAACLARIEATEPKLRAILHLGAESALEKARAMD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + A+ L G+P+ IKD T S IL+ F P Y++T +KL GA++LG Sbjct: 61 AAGPD-PAKRLWGVPVLIKDAICVADAPTTCASKILENFVPFYDATCVEKLKAAGAILLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW + PGGSSGGS+AAV+ C A++GTDT Sbjct: 120 KANMDEFAMGSSTENSAYAVTANPWDT-----SRVPGGSSGGSAAAVSAGQCFAALGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F GTVGIKPTYGR SR G++++ SLDQ G +TRT D+A +L I+G+D Sbjct: 175 GGSIRQPAAFCGTVGIKPTYGRVSRYGLVAYGSSLDQIGPLTRTADDAAAMLTVISGHDP 234 Query: 241 CDATCVNLPVPDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T P PD+E L + ++G+T+G+P EY + + + Q+ + K GA Sbjct: 235 RDSTSAPRPAPDFEALLAGAGDLRGLTIGLPDEYWGEGVDDEVRAGCQEAVDAAKALGAT 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 +V +SLPHT YA+ YYI++ AEASSNLAR+DGVRYG R E + E+YE +RS GFG Sbjct: 295 VVPVSLPHTPYAVATYYIVAMAEASSNLARFDGVRYGYRAPEAVTLEELYELSRSKGFGP 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTYVLS+ YD++Y +A ++R LI++DF +AF + DVI PT+P +AFP+G Sbjct: 355 EVRRRIVIGTYVLSAGYYDAYYRKAAQVRRLIRQDFLDAFAK-CDVICGPTSPFAAFPIG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSV 476 + + M +D+FT+++N+AGLP +S+P L + +P+G+QL G F E + Sbjct: 414 QMSGDPLQM--YLSDIFTISLNLAGLPGLSMPVGLGKDSGLPIGMQLFGPAFDEAAILRT 471 Query: 477 GQII 480 +++ Sbjct: 472 AKVL 475 >gi|187922335|ref|YP_001893977.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia phytofirmans PsJN] gi|229485864|sp|B2T1M4|GATA_BURPP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|187713529|gb|ACD14753.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia phytofirmans PsJN] Length = 495 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/494 (44%), Positives = 316/494 (63%), Gaps = 22/494 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ +NS +NA+I+V A A+ +D + G Sbjct: 5 SLTELRAALTAKECSAVELAQLYLKRIDAANS-LNAFIQVDPDLTLAQAKAADALLHTGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F TKG + A S +L + +++TV +L + G V +GK NMDEF Sbjct: 64 AGPLVGLPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVARLQNAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+GPV +PW K PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGPVQNPWDV-----KAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + ++ D A LL A+AG+DE D+T + Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCATLLNAMAGFDERDSTSLV 238 Query: 248 LPVPDYERALD---------QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DY R L + + G+ +G+PKEY L+ + + + + GA Sbjct: 239 RDDEDYTRYLGKPWKEESAAKPLAGLRIGLPKEYFGAGLADDVRASVDAALKQYEALGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +V++SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG Sbjct: 299 LVDVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGP 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF+Q DVI+ P P+ A+ LG Sbjct: 359 EVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKQ-CDVIMGPVAPSVAWDLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLF 474 + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 AKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARML 475 Query: 475 SVGQIIEKEAGYFR 488 V ++ + R Sbjct: 476 QVADAFQRATDWHR 489 >gi|269794384|ref|YP_003313839.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sanguibacter keddieii DSM 10542] gi|269096569|gb|ACZ21005.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sanguibacter keddieii DSM 10542] Length = 503 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/486 (45%), Positives = 313/486 (64%), Gaps = 17/486 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + +E L + D+S+VE+ +++ I ++ ++A++ V A +A A A + D Sbjct: 1 MSDLTRKSAAELAAHLVAGDVSSVEVTQAHLDRISAVDTDVHAFLHVSADEALATARDID 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G D L G+PI +KD TKG+ T A S IL+G+ P Y++T+ +K+ G +L Sbjct: 61 ARRAAGEDLHPLAGVPIAVKDVVVTKGLPTTAGSKILEGWIPPYDATLVEKIKAAGLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG +PW D+ PGGS GGS+AAVA F +IGTD Sbjct: 121 GKTNMDEFAMGSSTEHSAYGNTRNPW----DLDRI-PGGSGGGSAAAVAAFEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G+I+ A SLDQAG +TRTV DSA+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGGVSRYGLIAMASSLDQAGPVTRTVLDSALLHELIGGHD 235 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T ++ PVP A Q + G+ VG+ KE + + +++ + LK A Sbjct: 236 PRDSTSLDEPVPTLVDAARQGALGDLTGVRVGVVKELSGEGYQAGVSARFEESLELLKAA 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA++VE+S PH AL AYY+I PAEASSNLA++DG+R+GLRVE + + TR Sbjct: 296 GAEVVEVSCPHFVNALAAYYLIMPAEASSNLAKFDGMRFGLRVEPTEGPVTAERVMSATR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK R+++GTY LS+ YD++Y A+K+RTLI+RDF AFE+ DV+++PT+PT Sbjct: 356 GAGFGDEVKRRVILGTYALSAGYYDAYYGSAQKVRTLIQRDFAAAFEK-ADVLVSPTSPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +AF G++ ++ +M NDV T+ N+AG+P IS+P L + +P+G Q++ +E Sbjct: 415 TAFKFGEKLDDPLAM--YLNDVATIPANLAGVPGISLPNGLSDDGLPVGFQILAPARADE 472 Query: 472 TLFSVG 477 L+ VG Sbjct: 473 RLYRVG 478 >gi|94501801|ref|ZP_01308314.1| glutamyl-tRNA amidotransferase subunit A [Oceanobacter sp. RED65] gi|94426109|gb|EAT11104.1| glutamyl-tRNA amidotransferase subunit A [Oceanobacter sp. RED65] Length = 454 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 205/463 (44%), Positives = 304/463 (65%), Gaps = 13/463 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++ + ++E L + + ++VE+ + I+ ++ + +N++I V ++A A A+ +D Sbjct: 1 MHNLTLAEISKGLETGEFTSVEVTQHFLDRIKQLDQGENGLNSFITVCEEQALADAKAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G+A G+P KD F T G+ T S +L F P Y++T+ +K GAV LG Sbjct: 61 ERRAAGNATPWTGVPFAHKDIFCTDGVLTTCASKMLSNFVPPYDATIVEKFKQQGAVCLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSSNE+S++G V +PW K PGGSSGGS+AAVA L A+ GTDT Sbjct: 121 KTNMDEFAMGSSNESSFFGEVKNPWNQ-----KAIPGGSSGGSAAAVAARLAPAATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP++ T G+KPTYGRCSR G+I+FA SLDQAG + +T D+A++L +AG+DE Sbjct: 176 GGSIRQPSALTNLTGLKPTYGRCSRWGMIAFASSLDQAGPMAQTAEDAAMMLNVMAGFDE 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V P D+ L+ I+G +G+PKE+ + L + ++ I+ + G + Sbjct: 236 KDSTSVEQPDTDFTANLNDDIKGKVIGLPKEFFPESLDGEMASKMREAIAEFEKLGCTVK 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 EI LP T A+PAYY+++PAE S+NL+R DGVR+G R + KD+ ++Y+ +R GFG EV Sbjct: 296 EIDLPSTDLAIPAYYVVAPAECSANLSRMDGVRFGYRCNDPKDVEDLYKRSRGEGFGDEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+ LS+ YD++Y++A+KIR LIK DF +AFE VD I+ PTTP+ AF +G++ Sbjct: 356 KRRIMVGTFALSTGFYDAYYVKAQKIRRLIKNDFVKAFED-VDYIMGPTTPSPAFNIGEK 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 ++ SM D FT++ N+AGLP +S+PA +P+GLQ Sbjct: 415 NDDPVSM--YMEDKFTLSCNLAGLPGMSIPAGQI-NGLPVGLQ 454 >gi|269127762|ref|YP_003301132.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermomonospora curvata DSM 43183] gi|268312720|gb|ACY99094.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermomonospora curvata DSM 43183] Length = 498 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/469 (47%), Positives = 302/469 (64%), Gaps = 16/469 (3%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 +SAVE+ +++ I + ++ A++ V A+ A A A D R G+ L G+PI K Sbjct: 22 VSAVEVTQAHLDRIAEVDGRIGAFLHVDAEVALAQARAVDSRRAAGEELGPLAGVPIAHK 81 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D F T + T A S IL+G+RP Y++TVT +L G V+LGK N+DEFAMGSS E S YG Sbjct: 82 DVFTTVDMPTTAGSKILEGWRPPYDATVTARLRAAGLVILGKTNLDEFAMGSSTENSAYG 141 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 P +PW + PGGSSGGSSAAVA + + GTDTGGSIRQPA+ TG VG KPT Sbjct: 142 PTRNPWDL-----ERVPGGSSGGSSAAVASYQAPLATGTDTGGSIRQPAAVTGIVGTKPT 196 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERALD 258 YG SR G+I+FA SLD G RTV D+A+L +A +G+D D+T ++ PVP E A Sbjct: 197 YGGSSRYGLIAFASSLDTPGPFGRTVLDAALLHEAFSGHDPMDSTSIDRPVPPVVEAARR 256 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + G+ +G+ KE + P + + + + L+ GAK+ E+S PH YALPAYY+I+ Sbjct: 257 ADVAGLRIGVVKELGGEGYQPGVLARFNEAVELLESLGAKVAEVSCPHFAYALPAYYLIA 316 Query: 319 PAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P+E SSNLAR+D +RYGLRV G D E+ TR+ GFG EVK RIM+GTY LSS Sbjct: 317 PSECSSNLARFDAMRYGLRV-GDDGTRSAEEVMALTRAQGFGPEVKRRIMLGTYALSSGY 375 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y +A+++RTLI RDF AFEQ VDV+++PTTPT+AFPLG ++ M D+ Sbjct: 376 YDAYYGKAQQVRTLIIRDFEAAFEQ-VDVLVSPTTPTTAFPLGDRVDD--PMAMYLADLA 432 Query: 435 TVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+ N+AG PAISVP L E +P+GLQ++ ++ ++ VG +E+ Sbjct: 433 TIPSNLAGTPAISVPCGLADEDDLPVGLQVMAPVLADDRVYRVGAAVER 481 >gi|116753498|ref|YP_842616.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanosaeta thermophila PT] gi|116664949|gb|ABK13976.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanosaeta thermophila PT] Length = 471 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 222/475 (46%), Positives = 309/475 (65%), Gaps = 18/475 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 +D +RS SA E + + IE S++NA+ + + A AA E D R G L Sbjct: 6 KDEIRSG--SAEEYLHRLFERIE--RSRLNAFTTLAKESALEAAREFDARPWGG---ALA 58 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+ IKD T+GI T S IL GF P Y++ V ++L GA+++GK NMDEFAMG+S Sbjct: 59 GIPVAIKDNICTRGIETTCSSRILKGFIPPYDAHVIERLRAEGAIIIGKTNMDEFAMGTS 118 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETS +GP +PW + PGGSSGGS+AAVA ++G+DTGGS+R PASF G Sbjct: 119 TETSCFGPTRNPWDL-----ERVPGGSSGGSAAAVAAGEAPCALGSDTGGSVRCPASFCG 173 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 TVG+KPTYG SR G+I++A SL+Q G IT+TV D+A+LL IAG+D D+T + + Sbjct: 174 TVGMKPTYGLVSRYGLIAYANSLEQIGPITKTVEDAALLLDVIAGHDPRDSTSIA-SEGN 232 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y ++ + I+G+ +G+P+EY + + P +++ +S L+ GA +ISLPHT+YALP Sbjct: 233 YLSSIGRDIRGICIGVPEEYFGEGVDPGVERAVWDAVSVLEGLGASWRKISLPHTKYALP 292 Query: 313 AYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII+ +EASSNLAR+DG+RYGLRV E KD + R++GFG+E K RI++GTY LS Sbjct: 293 AYYIIAMSEASSNLARFDGLRYGLRVGEDKDWHTTFSEIRAMGFGKETKRRILLGTYALS 352 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + Y +YL+A K+RTLIKRDF A + VD+I +PT P AF +G+ + S+ + Sbjct: 353 AGYYGRYYLKALKVRTLIKRDFEHALNK-VDIIASPTMPFPAFKIGERITDPLSL--YMS 409 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 DVFTV +N+AG+PAISVP + +P+GLQL+ +PF E L V E+ Y Sbjct: 410 DVFTVPINLAGIPAISVPCGFSD-GLPVGLQLMARPFDEALLLRVANAYEQATPY 463 >gi|119896464|ref|YP_931677.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Azoarcus sp. BH72] gi|166217641|sp|A1K1T5|GATA_AZOSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|119668877|emb|CAL92790.1| glutamyl-tRNA(GLN) amidotransferase subunit A [Azoarcus sp. BH72] Length = 487 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 222/481 (46%), Positives = 312/481 (64%), Gaps = 14/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE R L ++ +S+VEL ++ I N +NA+I + + A AAA +D RI G Sbjct: 5 SVSELRRALDTRQVSSVELATLFLDRIAERNPALNAFITIDREGALAAARAADARIAAGT 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L GIP+ KD F T+G+ T S +L F Y++ V +L D GAV LGK NMDEF Sbjct: 65 AGPLTGIPLAHKDLFCTEGVLTTCGSKMLADFVSPYDAHVVSRLKDAGAVSLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE+S+YG V +PW D+T PGGSSGGS+AAVA L + G+DTGGS+RQP Sbjct: 125 AMGSSNESSHYGAVRNPW---DTTR--IPGGSSGGSAAAVAARLVPLATGSDTGGSVRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS TG GIKPTYG SR G+I++A SLDQ G + D A+LL A+AG+D D+TC++ Sbjct: 180 ASHTGVTGIKPTYGVVSRYGMIAYASSLDQGGAFGASAEDCALLLTAMAGFDPRDSTCLD 239 Query: 248 LPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P DY AL + + G+ +G+P+E+ + ++ + + + GA VE+ Sbjct: 240 RPAEDYAAALAPTAGGKPLAGLRIGLPREFFAEGMADDVRAAVDAALDQYRALGAVTVEV 299 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLP+ + A+PAYY+I+PAEASSNL+R+DGVRYG R E D+ +MY +R+ GFG EVK Sbjct: 300 SLPNAKLAVPAYYVIAPAEASSNLSRFDGVRYGHRAAEYGDLNDMYCKSRAEGFGAEVKR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS YD++YL+A+K+R LI +DF AF Q DVI PT+PT+A+ +G++ + Sbjct: 360 RILVGTYVLSHGYYDAYYLQAQKLRRLIAQDFQAAFAQ-CDVIAGPTSPTTAWAIGEKAD 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D++T+AVN+AGLP +S P ++P+GLQLIG F E L + + Sbjct: 419 DPVQM--YLSDIYTIAVNLAGLPGLSHPCGFGAGRLPVGLQLIGNYFGESRLLATAHQYQ 476 Query: 482 K 482 + Sbjct: 477 Q 477 >gi|54294624|ref|YP_127039.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella pneumophila str. Lens] gi|81601316|sp|Q5WVW0|GATA_LEGPL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|53754456|emb|CAH15940.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella pneumophila str. Lens] Length = 483 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 212/479 (44%), Positives = 305/479 (63%), Gaps = 18/479 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +++ S+VEL I I+ SN +NA+I + +A A+ +D + NG+ + L GIP Sbjct: 13 LHNREFSSVELTQHCINKIQ-SNKDLNAFISLDEDQALKEAQSADLVLKNGEGKPLTGIP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F TK ++T S +L F+ Y++T+ K NGA+++GK NMDEFAMGSSNE Sbjct: 72 MALKDLFCTKRLNTTCASKMLANFQAPYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNEN 131 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G V +PW + PGGSSGGS+AAVAG L +IG+DTGGSIRQPA+F G G Sbjct: 132 SYFGSVKNPWDR-----ERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCGISG 186 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+++FA SLDQAG ++ D A++L IAG+D D+T + +PDY Sbjct: 187 IKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSADRVIPDYST 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + + + +G+P + + I + ++ GA+I+EI L +P YY Sbjct: 247 EIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLWVPCYY 306 Query: 316 IISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ AEASSNL+RYDG+R+G R + ++E+ N+RS GFG EVK RI+ GT+VLSS Sbjct: 307 VIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVLSSGF 366 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D++YL A+K+R LI RD VDVIL PTTPT+AF LG++ ++ + + DVF Sbjct: 367 FDAYYLHAQKVRRLI-RDELITILNSVDVILGPTTPTTAFKLGEKIDD--PIQNYLADVF 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 TVA N+AGLPAIS+P E K+P+GLQL+G+ F E L ++ A +++ H W Sbjct: 424 TVAANLAGLPAISIPTGF-ENKLPIGLQLMGKHFSENRLLAI-------AHHYQQHTNW 474 >gi|284992465|ref|YP_003411019.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geodermatophilus obscurus DSM 43160] gi|284065710|gb|ADB76648.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Geodermatophilus obscurus DSM 43160] Length = 512 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/489 (45%), Positives = 317/489 (64%), Gaps = 25/489 (5%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + +E RL + + S+VEL +Y+ I + + AY+ V A+ A A A E D Sbjct: 7 TDLTQLDAAELGRRLAAGETSSVELTRAYLDRIAAQDDVLGAYLHVDAEAALARAGEVDA 66 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + L G+P+ +KD F T+G+ T + S IL+G+RP Y++TVT +L G V+LG Sbjct: 67 ARAAGAELGPLAGLPVALKDVFVTEGVPTTSGSRILEGWRPPYDATVTARLKAAGTVLLG 126 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y P +PW D+ PGGSSGGSS AVAG L ++GTDT Sbjct: 127 KTNMDEFAMGSSTENSAYRPTRNPW----DPDRI-PGGSSGGSSTAVAGGLAPWALGTDT 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TG VG KPTYG SR G+I+F+ SLDQAG + RTV D+A+L + I G+D Sbjct: 182 GGSIRQPAAMTGLVGHKPTYGSVSRYGLIAFSSSLDQAGPMARTVLDAAVLHEVIGGHDR 241 Query: 241 CDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLD-----YLSPTIDKTWQQGISW 291 CD+T +N PVP R++ + + G+ VG+ +E D Y + +D+ ++ + Sbjct: 242 CDSTSINAPVPVLVRSVQEGARGELAGLRVGVVRELGGDGHTDGYDAGVLDRV-RETVDL 300 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMY 347 L+ GA++ E+S P ALPAYY+I+P+EASSNLAR++G+R+GLRV G D + E+ Sbjct: 301 LEGMGAEVREVSCPAFDLALPAYYLIAPSEASSNLARFEGMRFGLRV-GDDGSHSLEEVM 359 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 TR GFG EVK RI++GTY LS+ YD++Y +A+K+RTLI RDFT AF+ VDV+++P Sbjct: 360 SLTREQGFGPEVKRRIVLGTYALSAGYYDAYYGQAQKVRTLITRDFTSAFDD-VDVLVSP 418 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T+PT A+P+G ++ +M D+ T+ ++AGLPAISVP L E +P+G Q++ Sbjct: 419 TSPTVAWPIGARVDDPLAM--YAADLCTLPASLAGLPAISVPCGLSE-GLPVGFQVMAPA 475 Query: 468 FREETLFSV 476 ++ + V Sbjct: 476 LADDRCYRV 484 >gi|256832936|ref|YP_003161663.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Jonesia denitrificans DSM 20603] gi|256686467|gb|ACV09360.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Jonesia denitrificans DSM 20603] Length = 504 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 212/490 (43%), Positives = 313/490 (63%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + +E +L++ DI++ + +++ I + +NA++ V A+ A A A + D Sbjct: 1 MSDITRLTAAELAQKLQAGDITSEQATQAHLDRIAAVDPTINAFVTVTAEDALATARDVD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G+ L G+PI IKD T G+ T A S +L+G+ P Y++T+ +K+ + +L Sbjct: 61 ERRARGEQLHPLAGVPIAIKDVVVTDGVQTTAGSKMLEGWIPPYDATLVEKIKEARLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG ++PW + PGGS GGS+AA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTEHSAYGNTLNPWDI-----ERIPGGSGGGSAAALAAFEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G+I+ A SLDQAG +TRTV D+A+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGSVSRYGLIAMASSLDQAGPVTRTVLDAALLHELIGGHD 235 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + P Y +A + + G+ VGI KE + P + + + ++ L+DA Sbjct: 236 PKDSTSLPQPATGYVKAAQEGALGDLTGVRVGIVKELTGEGYQPGVQARFDESVALLRDA 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA +VE+S P AL AYY+I PAEASSNLA++DG+R+GLRVE D + TR Sbjct: 296 GATVVEVSCPSFTTALAAYYLIMPAEASSNLAKFDGMRFGLRVEPTDGPLTAERVMAATR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI+IGTY LSS YD++Y A+K+RTLI+RDFT AFEQ DV+++PT+PT Sbjct: 356 GQGFGDEVKRRIIIGTYALSSGYYDAYYGSAQKVRTLIQRDFTAAFEQ-ADVLVSPTSPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +AF G++ ++ +M ND+ T+ N+AG+P +S+P + + MP+G Q++ + Sbjct: 415 TAFKFGEKLDDPLAM--YLNDIATIPANLAGVPGMSLPNGVSDDGMPVGFQILAPISEDA 472 Query: 472 TLFSVGQIIE 481 ++ +G +E Sbjct: 473 RMYRIGAALE 482 >gi|238063196|ref|ZP_04607905.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Micromonospora sp. ATCC 39149] gi|237885007|gb|EEP73835.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Micromonospora sp. ATCC 39149] Length = 491 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 222/498 (44%), Positives = 311/498 (62%), Gaps = 19/498 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + E + + SAVE+ +++ I ++NA++ V A+ A AAA D Sbjct: 1 MTDLTKLTAVEIAGLVAGGETSAVEVTRAHLDRIAAVEDRVNAFLHVDAEGALAAARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G+ L G+P+ +KD TKG+ T S IL+G+RP Y++T+ ++L G VML Sbjct: 61 ERRAAGEELGPLAGVPVAVKDVLTTKGVPTTVGSKILEGWRPPYDATIVERLRAAGTVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW TD+ PGGS GGS+AA+A + +IG+D Sbjct: 121 GKTNMDEFAMGSSTEYSAYGPTRNPW----DTDRI-PGGSGGGSAAALAAYEAPLAIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G+++F+ SLD G RTV D+A+L AI G+D Sbjct: 176 TGGSIRQPGAVTGTVGAKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHAAIGGHD 235 Query: 240 ECDATCVNLPVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVPD R + G+ +G+ E+ + P + ++ + L Sbjct: 236 PRDSTSIPQPVPDVVAAARRGATGDLTGVKLGVVTEFSGEGAEPGVAAAFRDSVDALAKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+S PH YALPAYY+I+P+E SSNLAR+DGVR+GLR EG D + E+ TR Sbjct: 296 GAEIVEVSCPHFSYALPAYYLIAPSECSSNLARFDGVRFGLR-EGDDGNRSLEEVMSLTR 354 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RIM+GTY LSS YD++Y +A+K+RTLI RDFT AFE+ VD +++PTTP Sbjct: 355 DAGFGPEVKRRIMLGTYALSSGYYDAYYGQAQKVRTLITRDFTAAFER-VDALISPTTPF 413 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 AFP+G ++ M D++T+ N+ G P ISVP L E +P+GLQ++ ++ Sbjct: 414 VAFPIGARTSDPYQM--YLADLYTIPTNLYGGPGISVPCGLSE-GLPVGLQIMAPTMADD 470 Query: 472 TLFSVGQIIEKEAGYFRP 489 ++ V +E G F P Sbjct: 471 RMYRVAAALESAVGTFTP 488 >gi|297243156|ref|ZP_06927094.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Gardnerella vaginalis AMD] gi|296889367|gb|EFH28101.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Gardnerella vaginalis AMD] Length = 513 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/484 (44%), Positives = 311/484 (64%), Gaps = 20/484 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ ++ +++K++S+ ELV++++ IE++ ++ A++ V A A A+ D + Sbjct: 6 DLVKLSAADMAKAVKAKEVSSRELVEAHLAVIESAEPEIKAFLHVSADIALEQADAFDAK 65 Query: 63 IINGDAR---DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G+ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 66 NAKGETEGLPELAGVPIAIKDMIVTKGIPTTAASKILEGWVPPYDATVIEKLKAAGMPIL 125 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 126 GKTNLDEFAQGSSTEHSAYQTTCNPWDT-----ERVPGGSGGGSAAAVAAFEAPIALGTD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G D Sbjct: 181 TGGSIRQPGALTGTVGAKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGND 240 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVP +A + ++G+ VG+ KE + P ++ + + + LKD Sbjct: 241 RRDSTSIPAPVPPMAQAAREGARRDLKGLKVGLVKELSGEGFQPGVEARFNEAVQLLKDM 300 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----EGKDILEMYENT 350 GA++ E+S PH Y+L AYYII P+E SSNLARYDG+RYGLRV + + M T Sbjct: 301 GAEVTEVSCPHFPYSLAAYYIIMPSEVSSNLARYDGMRYGLRVMPPADKPQTAANMMAAT 360 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI RDF EAF++ VDV+++PT+P Sbjct: 361 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFEEAFKK-VDVLVSPTSP 419 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+AF G++ ++ SM ND+ T+ NMAG+PA+S+PA L + +P+G+Q+I + Sbjct: 420 TTAFKFGEKMDDPLSM--YMNDIATIPANMAGVPALSLPAGLSDDGLPVGIQIIAPQCHD 477 Query: 471 ETLF 474 E ++ Sbjct: 478 EKMY 481 >gi|262371805|ref|ZP_06065084.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter junii SH205] gi|262311830|gb|EEY92915.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter junii SH205] Length = 492 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/479 (46%), Positives = 319/479 (66%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L+ S+ EL + Y++ I ++++ +Y+ V A++A A A+ +D Sbjct: 1 MTDLHRLSIRELSEGLKQAQFSSRELTEHYLKRIAKIDAKVKSYVTVTAEQALAEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G A L GIP+ KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AALKAGHAHALAGIPLAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKAKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY+G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYFGATGNPW-ALD----HVPGGSSGGSAAAVAADLAPIATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR G+I++A SLDQ G + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V+ V DY L+ +++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVDKEVDDYVANLNGTAVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E KDIL++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPKDILDLYKRSRSEGFGA 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P+ PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPSAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|227503900|ref|ZP_03933949.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium striatum ATCC 6940] gi|227199523|gb|EEI79571.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium striatum ATCC 6940] Length = 494 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/487 (44%), Positives = 318/487 (65%), Gaps = 22/487 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +E +++ S+++++ E+ ++ IE ++ ++NA++ V A++A A A+ DK + G Sbjct: 14 MTAAELAEKIHSRELTSREVTQGFLDRIEETDGELNAFLYVGAEQALATADAVDKALDAG 73 Query: 67 D--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + A L G+P+ +KD T T A S +L+G+ Y++T+ KL + G +LGK N+ Sbjct: 74 EKPASALAGVPLALKDLLVTTDAPTTAASKMLEGWMSPYDATLVTKLREAGIPILGKTNL 133 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNE S YGPV +P+ TD+ TPGGS GG++AA+A IGTDTGGSI Sbjct: 134 DEFAMGSSNENSAYGPVHNPY----DTDR-TPGGSGGGTAAALAAGQAPLGIGTDTGGSI 188 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG+D DAT Sbjct: 189 RQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPTARTVLDTALLHEIIAGHDSFDAT 248 Query: 245 CVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V+ PV A + + G+ VG+ K++ D P + + + + LK GA+IV Sbjct: 249 SVDKPVAPVVAAAREGANGDLSGVKVGLIKQFERDGWQPGVMEAYHAAVEQLKAQGAEIV 308 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFG 356 E+ PH AL AYY+I P E SSNLAR+DG+RYGLR EG D E+ +R+ GFG Sbjct: 309 EVDCPHFDDALAAYYLIMPCEVSSNLARFDGMRYGLR-EGDDGTHSAEEVMSLSRAKGFG 367 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIM+GTY LS YD++YL+A+++RTLI +DFT+AFEQ VDV+++PTTPT+AF L Sbjct: 368 PEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLIAQDFTKAFEQ-VDVLVSPTTPTTAFKL 426 Query: 417 GKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 G++ + +M YN D+ T+ +N+AG+ +SVP+ L + +P GLQ++ F ++ L+ Sbjct: 427 GEKVEDPMAM---YNFDLCTLPLNLAGVCGMSVPSGLASDTNLPTGLQIMAPAFADDRLY 483 Query: 475 SVGQIIE 481 VG E Sbjct: 484 KVGAAYE 490 >gi|322391464|ref|ZP_08064933.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus peroris ATCC 700780] gi|321145547|gb|EFX40939.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus peroris ATCC 700780] Length = 488 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 295/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I+ +NA++ + +A A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLEDIKAREEAINAFVTIAEDQALAQAKAIDETG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKSKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYGP + W PGGSS GS+ +VA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGPAKNAWDHSK-----VPGGSSSGSAVSVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLSEGIDPEVKDTILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|322373558|ref|ZP_08048094.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. C150] gi|321278600|gb|EFX55669.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. C150] Length = 488 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 296/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNHKTIEELHDLLVSKEISATELTQATLDDIKAREEAVNAFVTVAEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYGP + W PGGSS GS+A+VA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGPAKNAWDHSK-----VPGGSSSGSAASVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|320008423|gb|ADW03273.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces flavogriseus ATCC 33331] Length = 500 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/488 (44%), Positives = 318/488 (65%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S + + +E R+ S +++AVE+ ++++ I+ + +++A++ + + A A A D Sbjct: 4 ISTIIKLTAAEIAARIASGELTAVEVTEAHLARIDAIDEKVHAFLHIDREGALAQARAVD 63 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR + L G+P+ +KD F T+ + T S IL+G+ P Y++T+T+KL V+L Sbjct: 64 AKREAGEELGPLAGVPLALKDIFTTQDMPTTVGSKILEGWVPPYDATLTKKLKAADVVIL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 124 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFEAPLAIGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 179 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 238 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+QGM VG+ K++ + + + +++ + LK GA Sbjct: 239 PLDSTSIDAPVPPVVEAARNGSVQGMRVGVVKQFSGEGYQAGVVQRFEESVELLKSLGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 +VE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR G Sbjct: 299 VVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTALTREAG 357 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTY LSS YD++Y A+K+RTLI +DF +AFEQ VDVI++PTTPT+AF Sbjct: 358 FGDEVKRRIILGTYALSSGYYDAYYGSAQKVRTLITQDFEKAFEQ-VDVIVSPTTPTTAF 416 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 417 PIGERADD--PMAMYLADLCTIPTNLAGNSAMSLPCGLAPEDGLPVGLQIIAPAMKDDRL 474 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 475 YKVGAAVE 482 >gi|323700749|ref|ZP_08112661.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio sp. ND132] gi|323460681|gb|EGB16546.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio desulfuricans ND132] Length = 485 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 209/485 (43%), Positives = 315/485 (64%), Gaps = 13/485 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ +SE L++ D+ VE+V+ + IE + ++ A I V+ +A AE D Sbjct: 1 MSELHTKTLSEIAALLQAGDVKVVEVVEHCLARIEATEPKVRALITVMGDEALKQAEALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + ++ L G+P+ +KD TKG+ T S IL+ F P Y++T +L + GAV +G Sbjct: 61 AAGPD-PSKPLWGVPMVLKDLLTTKGVRTTCGSRILENFVPFYDATAVARLKEAGAVFIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S + +PW + PGGSSGGS A VA C ++GTDT Sbjct: 120 KANMDEFAMGSSTENSAFFMTANPWDV-----ERVPGGSSGGSGATVAAGQCFGALGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P+SF G VG+KPTYGR SR G+I++ SLDQ G +TR+V D+A LL+ +AG+D Sbjct: 175 GGSIRTPSSFCGIVGLKPTYGRISRFGLIAYGSSLDQIGPMTRSVEDAARLLQVMAGHDP 234 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V++ VPDY AL + ++G+ +G+P+EY + L + + + ++ ++ GA Sbjct: 235 KDSTSVDVEVPDYLAALGREDLKGVRIGLPEEYWGEGLDAEVKEACRAAVAEMEKLGAVT 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQE 358 V + L T+YA+ YYII+ AEASSNL+R+DGVR+G R + +++++MY +R+ GFG E Sbjct: 295 VPVKLALTEYAIATYYIIAMAEASSNLSRFDGVRFGYRNKKAEELIDMYTASRTEGFGDE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V+ RI++GTYVLSS YD++Y +A K+R L+++DF +AFEQ D+I P PT+AF G Sbjct: 355 VQRRIIMGTYVLSSGYYDAYYNKAAKVRRLLRQDFDKAFEQ-CDLIAGPVCPTTAFVTG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVG 477 + + + D+FT++ N+AG+PA+S+P L + MP+GLQL+G F E+ + SV Sbjct: 413 --DKADPLQMYLMDIFTISANLAGIPAMSLPVGLGRDSHMPVGLQLMGPAFSEQAMLSVA 470 Query: 478 QIIEK 482 + +E+ Sbjct: 471 ERLER 475 >gi|302330563|gb|ADL20757.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium pseudotuberculosis 1002] Length = 494 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/492 (44%), Positives = 318/492 (64%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++ +E ++ S+++++ E+ +++ I + +NA++ V ++A AAA+E D Sbjct: 9 SGLTSLSAAELAQKIHSRELTSREVTQAHLDRIAEVDPTLNAFLHVGVEEALAAADEVDA 68 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L G+PI +KD FAT T S +L+G+ Y++TVT+KL G +L Sbjct: 69 ALDRGEAPASALAGVPIALKDVFATTDAPTTCASKMLEGYVAPYDATVTKKLRAAGIPIL 128 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D+ TPGGS GG+SAA+A IGTD Sbjct: 129 GKTNMDEFAMGSSTENSAYGPTRNPW----DIDR-TPGGSGGGTSAALASGEAPLGIGTD 183 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 184 TGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHD 243 Query: 240 ECDATCVNLPV-PDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + DAT V+ PV P E A + + + G+ +G+ K++ D P + + + + L Sbjct: 244 KYDATSVDRPVAPVVEAAREGANGDLSGVKIGVVKQFDRDGYQPGVLEQFHVSVEQLTSQ 303 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR EG D E+ +R Sbjct: 304 GAEIVEVDCPHFDDALAAYYLILPCEVSSNLARFDGMRYGLR-EGDDGSHSADEVMSLSR 362 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++YL+A+++RTLI +DF A+E+ DV+++PTTPT Sbjct: 363 AAGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIAQDFAAAYEK-CDVLVSPTTPT 421 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFR 469 +AF LG++ ++ +M YN D+ T+ +N+AGL +SVPA L + +P+GLQ++ F Sbjct: 422 TAFKLGEKTSDPLAM---YNFDLCTLPLNLAGLCGMSVPAGLAKDTGLPVGLQIMAPAFC 478 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 479 DDRLYKVGAAFE 490 >gi|148359281|ref|YP_001250488.1| glutamyl/tRNA (Gln) amidotransferase subunit A [Legionella pneumophila str. Corby] gi|296107326|ref|YP_003619026.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella pneumophila 2300/99 Alcoy] gi|166217678|sp|A5ICP2|GATA_LEGPC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148281054|gb|ABQ55142.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella pneumophila str. Corby] gi|295649227|gb|ADG25074.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella pneumophila 2300/99 Alcoy] gi|307610433|emb|CBX00003.1| glutamyl-tRNA(Gln) amidotransferase [Legionella pneumophila 130b] Length = 483 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 209/479 (43%), Positives = 306/479 (63%), Gaps = 18/479 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +++ S+VEL I I+ SN +NA+I + +A A+ +D + NG+ + L GIP Sbjct: 13 LHNREFSSVELTQHCINKIQ-SNKDLNAFISLDEDQALKEAQSADLVLKNGEGKPLTGIP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F TK ++T S +L F+ Y++T+ K NGA+++GK NMDEFAMGSSNE Sbjct: 72 MALKDLFCTKRLNTTCASKMLANFQAPYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNEN 131 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G V +PW + PGGSSGGS+AAVAG L +IG+DTGGSIRQPA+F G G Sbjct: 132 SYFGSVKNPWDR-----ERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISG 186 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+++FA SLDQAG ++ D A++L IAG+D D+T V+ +PDY Sbjct: 187 IKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVIPDYSA 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + + + +G+P + + I + ++ GA+I+EI L +P YY Sbjct: 247 EIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLWVPCYY 306 Query: 316 IISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ AEASSNL+RYDG+R+G R + ++E+ N+RS GFG EVK RI+ GT+VLS+ Sbjct: 307 VIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVLSTGF 366 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 ++++YL A+K+R LI+ + VDVI+ PTTPT+AF LG++ N+ + + DVF Sbjct: 367 FNAYYLHAQKVRRLIRDELITTL-NSVDVIIGPTTPTTAFKLGEKIND--PIQNYLADVF 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 TVA N+AGLPAIS+P E K+P+GLQL+G+ F E L ++ A +++ H W Sbjct: 424 TVAANLAGLPAISIPTGF-ENKLPIGLQLMGKHFSESRLLAI-------AHHYQQHTNW 474 >gi|260424686|ref|ZP_05732961.2| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dialister invisus DSM 15470] gi|260402845|gb|EEW96392.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dialister invisus DSM 15470] Length = 485 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 215/476 (45%), Positives = 304/476 (63%), Gaps = 11/476 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDL 71 ++L +KDIS+VEL I +++A++ + + A A E DK+I +G+ +L Sbjct: 10 HEKLVNKDISSVELTKKIIAHRNLVEGEIHAFLSMSDETALERAAEVDKKIASGERISEL 69 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP IKD KG A S +L+ F Y +TV +KL + LGKLNMDEFAMGS Sbjct: 70 AGIPGAIKDNMCIKGQPCTAASKMLENFIAPYNATVIEKLESCDYISLGKLNMDEFAMGS 129 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E SY+GP +PW + PGGSSGGS+AAVA ++G+DTGGSIRQPASFT Sbjct: 130 STECSYFGPTHNPWNL-----ESVPGGSSGGSAAAVAANEAIWTLGSDTGGSIRQPASFT 184 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYG SR G+++FA SLDQ G +T+ V D+AI+L AIAGYD D+T + + Sbjct: 185 GIVGLKPTYGLVSRYGLLAFASSLDQIGPLTKDVTDAAIVLNAIAGYDHRDSTSIRMEKK 244 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 DY++AL + ++G +G+P+E+ + + + + +++ + GA+IV++S+PH + Sbjct: 245 DYKKALIKDVKGFRIGVPREFFGEGIGEETKEAIKSALAYYEKEGAEIVDVSIPHITSGV 304 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYII+PAEASSNLARYDGV +G R GKDI++MY +RS GFG+EVK RIMIG YVLS Sbjct: 305 DVYYIIAPAEASSNLARYDGVGFGYRASGKDIVDMYIKSRSTGFGEEVKRRIMIGNYVLS 364 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD++YL A K+RTL+KR+F +AFE+ D++ P+ +AF K + S + Sbjct: 365 AGYYDAYYLTALKVRTLLKREFEKAFER-CDILAAPSASGTAF---KFDAFSDPLALYME 420 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 D+ TV VN+ G P+IS+P + MPLG+QLIG EE + E++ F Sbjct: 421 DICTVPVNLIGAPSISIPVGF-KDGMPLGMQLIGPTLGEEKILQAAYTFEQDHPEF 475 >gi|153813416|ref|ZP_01966084.1| hypothetical protein RUMOBE_03836 [Ruminococcus obeum ATCC 29174] gi|149830508|gb|EDM85599.1| hypothetical protein RUMOBE_03836 [Ruminococcus obeum ATCC 29174] Length = 491 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/488 (41%), Positives = 299/488 (61%), Gaps = 11/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL M E ++R +++S ++ V IE+ +++AY++ ++A A A+E +K Sbjct: 2 ELESMTALELAAKIRQREVSVLDGVKEVFDQIESKEDKVHAYLDTYKKEAYARAKEVEKG 61 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G L G+PI +KD KG T S IL+ F P Y + V +L G +++GK Sbjct: 62 IQDGTYTGPLAGVPIAVKDNICIKGKKTTCASKILENFVPQYNAEVIDRLEKAGMIIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ ETS YG +PW + PGGSSGGS AAVA ++G+DTG Sbjct: 122 TNMDEFAMGSTTETSAYGVTRNPWNL-----EHVPGGSSGGSCAAVAAGETFMALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP+SF G GIKPTYG SR G++++A SLDQ G + + V D A LL+ I+G+D Sbjct: 177 GSIRQPSSFCGVTGIKPTYGTVSRYGLVAYASSLDQIGPVGKNVADCAALLEVISGHDPK 236 Query: 242 DATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T ++ + R++++ + GM G+PKE+ L P + +++ + L + GA + Sbjct: 237 DSTSLDRTDLTFSRSVEEKKLLGMKFGVPKEFLARGLDPEVKESFMNTLKTLTEQGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 S+ +Y +PAYYII+ AEASSNL R+DGV+YG R E + + +MY+ TR+ GFG+EV Sbjct: 297 FFSVETMEYMIPAYYIIASAEASSNLERFDGVKYGYRAAEYEGLHDMYKKTRTEGFGEEV 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G++VLSS YD++YL+A + + LIK++F +AFE+ DVIL P P +A +G Sbjct: 357 KRRIMLGSFVLSSGYYDAYYLKALRTKALIKQEFDQAFEK-YDVILAPAAPYTAPKIG-- 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E+ + D++TVAVN+ GLP I+VP + MP+G+Q+IG F E + Sbjct: 414 ESLKDPLAMYLGDIYTVAVNLCGLPGITVPCGQDKAGMPIGIQMIGDCFGEHKILRAAAA 473 Query: 480 IEKEAGYF 487 E G F Sbjct: 474 YEAVRGAF 481 >gi|116788242|gb|ABK24804.1| unknown [Picea sitchensis] gi|224284540|gb|ACN40003.1| unknown [Picea sitchensis] Length = 538 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 212/481 (44%), Positives = 313/481 (65%), Gaps = 20/481 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NGDARDL 71 R L S++ +AVE+ + Y+ ++ + + +++ V+ K A AEE D+R+ N D L Sbjct: 53 RKSLLSRERTAVEVAEEYLTRLQQTEPYVKSFL-YVSDKVLADAEEIDRRLRRNEDVGPL 111 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ +KD T+ + + S IL+G+RP +++T KL +GA+++GK N+DEF MGS Sbjct: 112 VGVPVAVKDNLCTRDMPSTGGSRILEGYRPPFDATAVTKLRQSGALLIGKTNLDEFGMGS 171 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E S + +PW S PGGSSGGSSAAVA CA S+G+DTGGSIRQPASF Sbjct: 172 TTEGSAFQVTSNPWDS-----SRVPGGSSGGSSAAVAARQCAVSLGSDTGGSIRQPASFC 226 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G++++A SLD G + +V D+AILL A+AG+D+ DAT VP Sbjct: 227 GVVGMKPTYGRVSRFGLMAYASSLDVIGCLGSSVMDAAILLGAMAGHDKLDATSSKTEVP 286 Query: 252 DYE------RALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY ALD + ++G+ +G+ +E D + + + Q L++ GA + E+SL Sbjct: 287 DYAAKLVPIEALDSKPLKGIKIGVIRETMGDGVDSGVISSIQASALRLEELGAALTEVSL 346 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 LPAYY+++P+EASSNLARYDG+RYG +V D+ MY ++RS GFGQEVK RI+ Sbjct: 347 SSFPLGLPAYYVLAPSEASSNLARYDGIRYGSQVPADDLESMYGSSRSNGFGQEVKRRIL 406 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y RA+++RTLI+RDF++A + G D++++P PT+A+ +G + N+ Sbjct: 407 MGTYALSAGYYDAYYKRAQQVRTLIQRDFSKALD-GNDILISPAAPTAAYKIGDKVNDPL 465 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALC---EKKMPLGLQLIGQPFREETLFSVGQIIE 481 SM D+ TV VN+AGLPA+ VP E+ +P+GLQ+I F E L VG I + Sbjct: 466 SM--YAGDIMTVNVNLAGLPALVVPCGFVKVGERDLPVGLQMISAAFEEGRLLQVGHIFQ 523 Query: 482 K 482 + Sbjct: 524 Q 524 >gi|73539780|ref|YP_294300.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia eutropha JMP134] gi|109891975|sp|Q477H7|GATA_RALEJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|72117193|gb|AAZ59456.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ralstonia eutropha JMP134] Length = 501 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/494 (44%), Positives = 310/494 (62%), Gaps = 25/494 (5%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L ++ +SA EL +Y+ IE + + +NA+ V A++ A A E+D R G+A L G Sbjct: 16 DALAARSVSAEELARTYLARIEQAGA-LNAFTHVDAERTLAQAREADARRARGEATLLTG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ KD F T+G A S +L + +++TV +++ G V LGK NMDEFAMGSSN Sbjct: 75 VPVAHKDVFVTRGWRATAGSKMLANYESPFDATVVERMAAAGMVTLGKTNMDEFAMGSSN 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S++G V +PW TD+ G S G ++A AG AA+ GTDTGGSIRQP+SF+G Sbjct: 135 ENSFFGAVRNPW----DTDRVPGGSSGGSAAAVAAGLAPAAT-GTDTGGSIRQPSSFSGI 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV--- 250 GIKPTYGR SR G+I+FA SLDQ G + T D A+LL A+AG+D D+T + Sbjct: 190 TGIKPTYGRVSRYGMIAFASSLDQGGPMAHTAEDCALLLNAMAGFDAKDSTSIPPEQGGV 249 Query: 251 -PDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ R L Q + G+ +G+P+EY LSP +++T + + + GA +V Sbjct: 250 DEDFARYLGQPRAGASESQPLAGLRIGLPREYFGKGLSPDVEETVRAALRQYEQLGATLV 309 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 E+SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ GFG EV Sbjct: 310 EVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRAEGFGAEV 369 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTYVLS YD++YL+A+KIR +I DF AF Q DVI+ P PT A+ LG++ Sbjct: 370 KRRIMVGTYVLSHGYYDAYYLQAQKIRRIIADDFQRAFAQ-CDVIMGPVAPTVAWKLGEK 428 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+FT++ ++AGLP +SVP + MP+GLQLIG F E L Sbjct: 429 TSDPVQM--YLADIFTLSTSLAGLPGMSVPCGFGDGNMPVGLQLIGNYFDEARLLQTAHA 486 Query: 480 IEKEAGYF--RPHK 491 ++ + RP K Sbjct: 487 FQQATDWHLRRPAK 500 >gi|22537808|ref|NP_688659.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus agalactiae 2603V/R] gi|76787557|ref|YP_330282.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus agalactiae A909] gi|76799135|ref|ZP_00781320.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae 18RS21] gi|77406581|ref|ZP_00783629.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae H36B] gi|77408283|ref|ZP_00785026.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae COH1] gi|77411890|ref|ZP_00788222.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae CJB111] gi|39931559|sp|Q8DY25|GATA_STRA5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109891989|sp|Q3JZM1|GATA_STRA1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|22534701|gb|AAN00532.1|AE014267_15 glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae 2603V/R] gi|76562614|gb|ABA45198.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae A909] gi|76585506|gb|EAO62079.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae 18RS21] gi|77162050|gb|EAO73029.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae CJB111] gi|77173141|gb|EAO76267.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae COH1] gi|77174806|gb|EAO77627.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus agalactiae H36B] Length = 488 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 210/486 (43%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ + D L K+ISA EL + ++ I + ++I + + A A A+E D + Sbjct: 3 FNNQSIDQLHDFLVKKEISATELTKATLEDIHAREQAVGSFITISDEMAIAQAKEIDDKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKAN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTNNAWDHSK-----VPGGSSGGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G VG+KPTYGR SR G+ +F SLDQ G +++TV+++A LL I+G+D D+ Sbjct: 177 IRQPASFNGIVGMKPTYGRVSRFGLFAFGSSLDQIGPMSQTVKENAQLLTVISGHDVRDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V D+ + Q IQGM + +PKEY + ++ + +T + L+ GA I E+S Sbjct: 237 TSSERTVGDFTAKIGQDIQGMKIALPKEYLGEGIAQGVKETIIKAAKHLEKLGAVIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYI++ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIVASSEASSNLQRFDGIRYGYRTENYKNLDDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++R+LI +DF + F D+IL PT PT+AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRSLIIQDFEKVFAD-YDLILGPTAPTTAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA ++ +P+G+QLIG F EET++ V E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGF-DQGLPVGMQLIGPKFSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|17544776|ref|NP_518178.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia solanacearum GMI1000] gi|39931609|sp|Q8Y3C3|GATA_RALSO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|17427065|emb|CAD13585.1| probable glutamyl-trna(gln) amidotransferase subunit a (glu-adtsubunit a) protein [Ralstonia solanacearum GMI1000] Length = 495 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/482 (45%), Positives = 310/482 (64%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K++SAVEL Y+ IE + + +NA+I V + A A+ +D R+ GDA L GI Sbjct: 12 QLAAKEVSAVELARHYLARIE-ARADLNAFIHVDPEATLAQAQAADARLAAGDAGPLAGI 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +LD + +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLDSYVSPFDATVVERLAAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S++GPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSHFGPVKNPWDVAR-----VPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARDSTSLEPGRGGDA 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L + ++ G+ +G+P+EY L+ + + ++ L+ GA +V+ Sbjct: 246 EDFGRLLGRPLEGADAARPLAGLRIGLPQEYFGAGLADDVRTAVRAALAELETLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R +D+ +MY TR+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAAYRDLADMYRKTRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF Q DVI+ P PT A+ LG++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQNAFGQ-CDVIMGPVAPTVAWKLGEKT 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPLQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|255505923|ref|ZP_05348905.3| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bryantella formatexigens DSM 14469] gi|255265092|gb|EET58297.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bryantella formatexigens DSM 14469] Length = 498 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 206/481 (42%), Positives = 293/481 (60%), Gaps = 18/481 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 ++R+ ++SA E + ++ I+ ++AY+ V + A AEE K+I G+ L G Sbjct: 22 KIRAGEVSAPEAARAALEQIKRLEGTVHAYVTVDEEGALKQAEEVQKKIEAGELTGPLAG 81 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD TKG+ T S IL+ F P Y + + L G V+LGK NMDEFAMGS+ Sbjct: 82 VPAAIKDNMCTKGLLTTCSSRILENFVPTYTAQAVENLEAAGVVVLGKTNMDEFAMGSTT 141 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETS YG +PW + PGGSSGGS AAVA C+ ++G+DTGGSIRQP+SF G Sbjct: 142 ETSAYGVTRNPWNP-----EHVPGGSSGGSCAAVAANECSFALGSDTGGSIRQPSSFCGV 196 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 GIKPTYG SR G+I++ SLDQ G + + V D A +L+ IA +D D+T + D+ Sbjct: 197 TGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVSDCAAILEVIASWDRKDSTSIKRDDCDF 256 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI----SWLKDAGAKIVEISLPHTQY 309 AL ++GM +GIP+ DYL +D +Q I L++ GA++ E L +Y Sbjct: 257 TSALTDDVKGMKIGIPR----DYLGSGLDVEVKQAILAAAEVLREKGAEVEEFDLSLVEY 312 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+PAYY I+ AEASSNL+R+DG++YG R E + + +MY+ +RS GFG EVK RIM+G++ Sbjct: 313 AIPAYYTIASAEASSNLSRFDGIKYGYRAKEYEGLHQMYKKSRSEGFGPEVKRRIMLGSF 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLSS YD++YL+A + + LIK+ F AF + DVIL P P +A LG+ +N M Sbjct: 373 VLSSGYYDAYYLKALRTKALIKQAFDRAFAK-YDVILGPAAPATAPKLGESLSNPLQM-- 429 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D++T++ N+AG+P ISVP K +P+GLQL+G F+E+ + E Y Sbjct: 430 YLGDIYTISANLAGIPGISVPCGRDSKGLPIGLQLLGDCFQEKKIIRAAYSFECSRTYEA 489 Query: 489 P 489 P Sbjct: 490 P 490 >gi|188590846|ref|YP_001795446.1| aspartyl/glutamyl-tRNA amidotransferase subunit a [Cupriavidus taiwanensis LMG 19424] gi|229485896|sp|B2AG25|GATA_CUPTR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|170937740|emb|CAP62724.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Cupriavidus taiwanensis LMG 19424] Length = 501 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 223/495 (45%), Positives = 310/495 (62%), Gaps = 27/495 (5%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L ++ +SA EL Y+ IE + + +NA+I V A+ A A +D+R G+A L G Sbjct: 16 DALAARTVSAEELAREYLARIEQA-AALNAFIHVDAELTLAQARAADERRARGEAAPLTG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ KD F T+G A S +L + +++TV +++ G V LGK NMDEFAMGSSN Sbjct: 75 VPVAHKDVFVTRGWRATAGSKMLGNYESPFDATVVERMAAAGMVTLGKTNMDEFAMGSSN 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S++GPV +PW + SSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 135 ENSHFGPVRNPWDAGRVPGG-----SSGGSAAAVAAGLAPAATGTDTGGSIRQPASFSGI 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV--- 250 GIKPTYGR SR G+I+FA SLDQ G + T D A+LL A+AG+D D+T + P Sbjct: 190 TGIKPTYGRVSRYGMIAFASSLDQGGPMAHTAEDCALLLNAMAGFDPKDSTSIP-PAQGG 248 Query: 251 --PDYERALDQ---------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DY R L Q + G+ +G+P+EY LS +++ + ++ + GA + Sbjct: 249 VDEDYTRLLGQPRAGATAERPLAGLRIGLPREYFGKGLSADVEQAVRAALAEYEKLGATL 308 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQE 358 VE+SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ TR+ GFG E Sbjct: 309 VEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKTRAEGFGAE 368 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI++GTYVLS YD++YL+A+KIR +I DF AF Q DVI+ P PT A+ LG+ Sbjct: 369 VKRRILVGTYVLSHGYYDAYYLQAQKIRRIIADDFQRAFAQ-CDVIMGPVAPTVAWKLGE 427 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M D+FT++ ++AGLP +SVP E MP+GLQLIG F E L Sbjct: 428 KTSDPVQM--YLADIFTLSTSLAGLPGMSVPCGFGEGNMPVGLQLIGNYFDEARLLQAAH 485 Query: 479 IIEKEAGYF--RPHK 491 ++ + RP K Sbjct: 486 AFQQATDWHLRRPAK 500 >gi|303247464|ref|ZP_07333736.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio fructosovorans JJ] gi|302491160|gb|EFL51052.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio fructosovorans JJ] Length = 488 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/484 (43%), Positives = 309/484 (63%), Gaps = 13/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ ++++E RD+L + +I A E V + + IE + ++ A + + A+ A A+ D Sbjct: 1 MSEICRLSLTEVRDKLAAGEIKAEEAVAACLSRIEATEPRIKAILTLTAETALERAKAMD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + R L G+P+ IKD T S IL+ F P Y++ KL D GA++LG Sbjct: 61 AAGPDAGKR-LWGVPVLIKDAICVADAPTTCASKILENFVPFYDAACIAKLRDAGAIILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S + +PW + PGGSSGGS+AAVA C A++GTDT Sbjct: 120 KANMDEFAMGSSTENSAFKVTANPWDT-----SRVPGGSSGGSAAAVASGQCFAALGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F GT+GIKPTYGR SR G++++ SLDQ G +TR D+A +L I+G+D Sbjct: 175 GGSIRQPAAFCGTLGIKPTYGRVSRYGLVAYGSSLDQIGPLTRNAADAAAMLTVISGHDP 234 Query: 241 CDATCVNLPVPDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T VPD+E A+ ++ + G+T+G+P EY + + + + + + GA Sbjct: 235 RDSTSAPREVPDFEAAIAEAKDLTGLTIGLPDEYWGEGVDEEVRAACRSAVDTAQKLGAN 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 +V +SLPHT YA+ YYI++ AEASSNLAR+DGVRYG R + + E+YE +RS GFG Sbjct: 295 VVPVSLPHTPYAVATYYIVAMAEASSNLARFDGVRYGYRAPDANSLEELYELSRSRGFGH 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+IGTYVLS+ YD++Y +A ++R LI++DF +AF + DVI PT+P +AFP+G Sbjct: 355 EVKRRIVIGTYVLSAGYYDAYYRKAAQVRRLIRQDFLDAFTK-CDVICGPTSPFAAFPIG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSV 476 + + M +D+FT+++N+AGLP +S+P L + MP+G+QL G F E T+ Sbjct: 414 QMSGDPLKM--YLSDIFTISLNLAGLPGLSMPVGLGKDSHMPIGMQLFGPAFDETTILRT 471 Query: 477 GQII 480 +++ Sbjct: 472 AKVL 475 >gi|329909904|ref|ZP_08275146.1| Aspartyl-tRNA(Asn) amidotransferase subunit A [Oxalobacteraceae bacterium IMCC9480] gi|327546373|gb|EGF31386.1| Aspartyl-tRNA(Asn) amidotransferase subunit A [Oxalobacteraceae bacterium IMCC9480] Length = 485 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 207/468 (44%), Positives = 303/468 (64%), Gaps = 15/468 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+SK +SA EL ++ I +S+ +NA++ V + A +D R+ + D L GIP Sbjct: 13 LQSKQVSATELAQHFLARIGSSD--LNAFLHVDPELTLQQAAAADLRLASEDHTPLTGIP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T+ A S +L + +++TV ++L + G V LGKLN DEFAMGSSN+ Sbjct: 71 IAHKDIFVTRDWRATAGSKMLANYTSPFDATVVERLGNAGMVTLGKLNCDEFAMGSSNQN 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S++GPV +PW SSGGS+AA+A L A+ GTDTGGSIRQPA+ G G Sbjct: 131 SFFGPVKNPWDKSAIPGG-----SSGGSAAAIAARLAPAATGTDTGGSIRQPAAMCGVTG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+D D+T + P DY R Sbjct: 186 IKPTYGRVSRFGMIAFASSLDQGGPMAQSAEDCALLLSAMAGFDARDSTSLQRPDEDYSR 245 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L + ++G+ +G+P+EY L+ +++ + ++ GA +V+ISLP+T+ ++PAYY Sbjct: 246 DLGKDLRGLRIGVPREYFGTGLAADVEQAVRAALAEYVKLGATLVDISLPNTELSIPAYY 305 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+R+DGVRYG R E D+ EMY+ TR+ GFG+EVK RI++G YVLS Sbjct: 306 VIAPAEASSNLSRFDGVRYGHRAENYSDLTEMYKRTRAEGFGEEVKLRILVGAYVLSHGY 365 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D++YL+A+KIR LI +DF +AF DVI+ P +PT A+ LG + ++ + + D++ Sbjct: 366 FDAYYLKAQKIRRLIAQDFQQAFTS-CDVIMGPVSPTVAWNLGDKADD--PVANYLADIY 422 Query: 435 TVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREETLFSVGQ 478 T++ ++AGLP +SVP + K P+GLQLIG F E L ++ Sbjct: 423 TLSTSLAGLPGMSVPCGFGQGEVNGKRPVGLQLIGNYFEEAKLLNIAH 470 >gi|94308994|ref|YP_582204.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cupriavidus metallidurans CH34] gi|166217704|sp|Q1LSE1|GATA_RALME RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|93352846|gb|ABF06935.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferase subunit A [Cupriavidus metallidurans CH34] Length = 499 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/483 (44%), Positives = 301/483 (62%), Gaps = 23/483 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L ++ +SA EL Y+ IE + +NA++ V + A A +D+R G A L G Sbjct: 16 DALAARSVSAEELAREYLARIEAGRA-LNAFVAVDPELTLAQARAADERRAQGQATPLTG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI KD F T+G + A S +L + +++TV ++L G V LGK NMDEFAMGSSN Sbjct: 75 VPIAHKDVFVTRGWKSTAGSKMLANYESPFDATVVERLAAAGMVTLGKTNMDEFAMGSSN 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S++GPV +PW + SSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 135 ENSFFGPVSNPWDTSRVPGG-----SSGGSAAAVAAGLAPAATGTDTGGSIRQPASFSGI 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV--- 250 GIKPTYGR SR G+I+FA SLDQ G + + D A+LL +AG+D D+T + + Sbjct: 190 TGIKPTYGRVSRYGMIAFASSLDQGGPMAHSAEDCALLLNGMAGFDPKDSTSLTPELGGV 249 Query: 251 -PDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ R L Q + G+ +G+P+EY LS +++ + ++ + GA +V Sbjct: 250 TEDFTRLLGQPRAGATASQPLAGLRIGLPREYFGKGLSADVEQALRAALAEYEKLGATLV 309 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEV 359 +++LP T+ ++P YYII+PAEASSNL+R+DGVRYG R + D+L+MY+ +R+ GFG EV Sbjct: 310 DVTLPKTELSIPVYYIIAPAEASSNLSRFDGVRYGHRAAQYGDLLDMYKKSRAEGFGPEV 369 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTYVLS YD++YL+A+KIR +I DF AF Q DVI+ P PT A+ LG++ Sbjct: 370 KRRIMVGTYVLSHGYYDAYYLQAQKIRRIIADDFQRAFTQ-CDVIMGPVAPTVAWKLGEK 428 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + M D+FT++ ++AGLP +SVP E MP+GLQLIG F E L Sbjct: 429 TADPVQM--YLADIFTLSTSLAGLPGMSVPCGFGEGNMPVGLQLIGNYFDEAQLLQTAHA 486 Query: 480 IEK 482 ++ Sbjct: 487 FQQ 489 >gi|108803673|ref|YP_643610.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rubrobacter xylanophilus DSM 9941] gi|122381984|sp|Q1AXT0|GATA_RUBXD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|108764916|gb|ABG03798.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rubrobacter xylanophilus DSM 9941] Length = 481 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 215/447 (48%), Positives = 293/447 (65%), Gaps = 12/447 (2%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +N++I + A A D+R+ G+ R E +PI +KD +T+G+ T S IL+ F Sbjct: 38 LNSFITGTPELALERAARVDERLRRGEEVRPWECVPIAVKDVLSTRGVRTTCGSRILENF 97 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 P YE++ + +M+GK NMDEFAMGSS E S YGP +PW PGGS Sbjct: 98 EPVYEASALLSFGPD-PIMVGKANMDEFAMGSSTENSAYGPTRNPW-----DLSRVPGGS 151 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS+AAVA ++GTDTGGS+RQPASF G VG+KPTYGR SR G+I+FA SLDQ G Sbjct: 152 SGGSAAAVAAGQGWWALGTDTGGSVRQPASFCGLVGLKPTYGRVSRYGLIAFASSLDQIG 211 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLS 278 +TR VRD+A+LL+AIAG+D D+T + VPDY L++ ++G+ VGI +E + + Sbjct: 212 PMTRDVRDAALLLQAIAGHDPKDSTSAGVEVPDYLSGLERGVEGLRVGIVRELVEAEGVE 271 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 + + + L++AGA++ E+SLPH Y LPAYYII+PAE SSNLARYDGVRYGLRV Sbjct: 272 GEVREISLRTARALEEAGARVGEVSLPHAGYGLPAYYIIAPAEVSSNLARYDGVRYGLRV 331 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + EMY TR GFG EVK RIM+GTY LS+ Y+++Y +A+K+RT I DF AF Sbjct: 332 PADGVHEMYRRTRERGFGDEVKRRIMLGTYALSAGYYEAYYGQAQKVRTRIIEDFRNAF- 390 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G DV+L+PT PT+AF LG++ ++ +M ND+ V ++AG+PAISVP L +P Sbjct: 391 SGYDVLLSPTCPTTAFGLGEKVDDPLAM--YANDICAVPASLAGIPAISVPGGLS-GGLP 447 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAG 485 +G+QL+G F E TL + E+ +G Sbjct: 448 VGVQLMGDYFSEPTLLRAARAAEQASG 474 >gi|148544654|ref|YP_001272024.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus reuteri DSM 20016] gi|184154007|ref|YP_001842348.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus reuteri JCM 1112] gi|227363777|ref|ZP_03847884.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus reuteri MM2-3] gi|227543581|ref|ZP_03973630.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus reuteri CF48-3A] gi|300909390|ref|ZP_07126851.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus reuteri SD2112] gi|325682988|ref|ZP_08162504.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus reuteri MM4-1A] gi|166989678|sp|A5VLG3|GATA_LACRD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485890|sp|B2G8T6|GATA_LACRJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148531688|gb|ABQ83687.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus reuteri DSM 20016] gi|183225351|dbj|BAG25868.1| glutamyl-tRNA amidotransferase A subunit [Lactobacillus reuteri JCM 1112] gi|227071134|gb|EEI09450.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus reuteri MM2-3] gi|227186421|gb|EEI66492.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus reuteri CF48-3A] gi|300893255|gb|EFK86614.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus reuteri SD2112] gi|324977338|gb|EGC14289.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus reuteri MM4-1A] Length = 490 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/485 (44%), Positives = 311/485 (64%), Gaps = 14/485 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++S+ D L +K ISA EL I+ + Q+ A+I + +A A E D + I+ D Sbjct: 7 SLSQLHDDLVNKKISATELTKETFDHIKGNEDQVKAFISLNEDQALKRAAEIDAKGISAD 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +KD TKG+ T A S +L+ F P Y++TV +KL + +GK N+DEF Sbjct: 67 QL-TAGVPLAVKDNILTKGLTTTAASKMLENFNPVYDATVVEKLNAADYINVGKTNLDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW D T PGGSSGGS+AAVA ++GTDTGGSIR P Sbjct: 126 AMGSSTENSAFFTTHNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYGR SR GII+F S DQ G +T+ V+D+A+L I+G DE D T Sbjct: 181 ASFNGVVGMKPTYGRVSRWGIIAFGSSFDQVGWLTQNVKDNALLTALISGNDERDMTSSL 240 Query: 248 LPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPD+ L++ +++G+ + +PKEY D L + + + + L+ GA + E+SLP Sbjct: 241 KEVPDWAAQLNENTNVKGLRIAVPKEY-FDGLDEDVQEVIKAALDHLESLGAIVDEVSLP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 HT+Y +PAYYI++ +EASSNL RYDG+RYG R + K++ ++Y +RS GFG+EVK RIM Sbjct: 300 HTKYGVPAYYILASSEASSNLQRYDGIRYGFRAADVKNLEDVYVRSRSEGFGEEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+ LS+ YD+++ +A K+R LI +DF + F+ DVI+ T ++AF +G E ++ Sbjct: 360 LGTFSLSAGFYDAYFNKAAKVRRLIAQDFEDVFKDH-DVIVGATGASTAFKIGAEIDDPQ 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKE 483 +M NDV TV VNMAGLPA+S+PA K MP+GLQ+IG+ F E+T+++ G + E+ Sbjct: 419 TM--YMNDVLTVPVNMAGLPAMSIPAGFSAKNGMPVGLQIIGKAFDEQTVYNTGYVFEQT 476 Query: 484 AGYFR 488 + + Sbjct: 477 TDFHK 481 >gi|120603212|ref|YP_967612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfovibrio vulgaris DP4] gi|166217667|sp|A1VFG9|GATA_DESVV RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|120563441|gb|ABM29185.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfovibrio vulgaris DP4] Length = 489 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/486 (44%), Positives = 314/486 (64%), Gaps = 13/486 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ ++++ RD L +++ A + V + IE + +++A + + A+ A A D Sbjct: 1 MSALHTLSLAAIRDALARREVRAEDAVLDCLARIETTEPRIDALLHLRAEAAIEEARALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +R L G+P+ +KD T G T A S IL+ F P Y++ Q+L + GA++LG Sbjct: 61 AAGPDA-SRPLWGVPVTVKDALTTAGTPTTAGSRILEDFVPFYDAFAVQRLREAGAIILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y P +PW + PGGSSGGS+A+VA C AS+GTDT Sbjct: 120 KNNMDEFAMGSSTENSAYKPTRNPWDT-----ARVPGGSSGGSAASVAAGQCFASLGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS G VG+KPTYGR SR G+I++ SLDQ G +TRTV D+AI++ IAG+D+ Sbjct: 175 GGSIRQPASLCGCVGLKPTYGRVSRFGLIAYGSSLDQIGPMTRTVEDAAIVMGVIAGHDK 234 Query: 241 CDATCVNLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+TC + PV D+ AL + G+ +G+P E+ + LSP + + + + +D GA Sbjct: 235 RDSTCADRPVEDFAAALASRHDLAGVRIGVPAEFWGEGLSPEVATSCRAALDAARDLGAT 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 IV+++LPHT ++ AYYI++ AEASSNLARYDGVRYG R +D++++Y +RS G G Sbjct: 295 IVDVALPHTPQSIAAYYIVASAEASSNLARYDGVRYGKRAHAPEDLMDLYVRSRSEGLGD 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RIM+GTYVLSS YD++Y +A ++R I D+ AF DVI P +P +A+PLG Sbjct: 355 EVQRRIMLGTYVLSSGYYDAYYRKAAQVRRRILEDYRNAFAT-CDVICGPVSPVTAWPLG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSV 476 + M DVFT+++N+AGLP +S+P L E MP+G+QL+G+ F E TL SV Sbjct: 414 ALTADPLQM--YLMDVFTLSLNLAGLPGLSLPVGLGTESGMPVGIQLLGRSFDEATLLSV 471 Query: 477 GQIIEK 482 G ++ + Sbjct: 472 GNVLSR 477 >gi|254383204|ref|ZP_04998557.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces sp. Mg1] gi|194342102|gb|EDX23068.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces sp. Mg1] Length = 498 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/482 (44%), Positives = 320/482 (66%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E+ +++ S +++AVE+ ++++ I+ ++ +++A++ V + A A A D + NG Sbjct: 8 LTAAETAEKIASGELTAVEVTEAHLARIDATDEKVHAFLHVDREGALAQARAVDAKRANG 67 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD F T G+ T S IL+G+ P Y++T+T+KL + V+LGK NMD Sbjct: 68 EKLGPLAGVPLALKDIFTTVGVPTTVGSKILEGWIPPYDATLTRKLKEADVVILGKTNMD 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D T PGGS GGS+AA+A F +IGTDTGGSIR Sbjct: 128 EFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSAAALAAFQAPLAIGTDTGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D D+T Sbjct: 183 QPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLDSTS 242 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S+ GM VG+ K++ + + + + + + LK+ GA+IVE+ Sbjct: 243 IDAPVPPVVEAARNGSVAGMRVGVVKQFAGEGYQAGVVQRFNESVELLKELGAEIVELDC 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVK 360 P A+ AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR GFG EVK Sbjct: 303 PSFDLAMAAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTALTREAGFGDEVK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+++GTY LSS YD++Y A+K+RTLI +DF ++FEQ VDVI++PTTPT+AF +G+ Sbjct: 362 RRVILGTYALSSGYYDAYYGSAQKVRTLITKDFEKSFEQ-VDVIVSPTTPTTAFAIGERT 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ +M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 421 DDPLAM--YLADLCTIPTNLAGNSAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLYKVGAA 478 Query: 480 IE 481 +E Sbjct: 479 VE 480 >gi|89902684|ref|YP_525155.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodoferax ferrireducens T118] gi|109891977|sp|Q21RH9|GATA_RHOFD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|89347421|gb|ABD71624.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodoferax ferrireducens T118] Length = 493 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/486 (45%), Positives = 312/486 (64%), Gaps = 14/486 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI---EVVAQKARAAAEE 58 + L+ + V++ LR++ +SA+E ++ A +N+ + A++ E V + AA+ Sbjct: 5 TALHDLTVAQLASLLRARKVSALETAQHFL-ARAQANASLGAFLDFNEEVTLRQARAADL 63 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + G L G+P+ KD F T+ + A S +L G+R +++TV KL G V Sbjct: 64 ALAADSGGATPTLLGVPMAHKDIFVTRDFISTAGSRMLAGYRSPFDATVVSKLAAQGVVT 123 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLN DEFAMGS+NE S +GPV +PW D T TPGGSSGGS+AAVA L A+ GT Sbjct: 124 LGKLNCDEFAMGSANENSAFGPVRNPW---DLTR--TPGGSSGGSAAAVAARLLPAATGT 178 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPASF G GIKPTYGR SR G+++FA SLDQAG + RT +D A+LL A+ G Sbjct: 179 DTGGSIRQPASFCGVTGIKPTYGRASRYGMVAFASSLDQAGPMARTAQDCALLLSAMCGP 238 Query: 239 D-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + D+T ++LP D+ R+L +SI+G+ +G+P E+ + L+ + + L+ GA Sbjct: 239 DPDRDSTSLDLPAEDFTRSLTESIEGLRIGVPAEFFGEGLADDVRAAVDGALKELEKLGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 ++V ISLP T+ ++P YYII+PAEASSNL+R+DGV++G R + D+ +MY+ TR+ GFG Sbjct: 299 RLVPISLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRAAQYADLTDMYKKTRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIMIGTYVLS YD++YL+A+KIR +I DF +A+ Q DVI P PT A+ L Sbjct: 359 DEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIADDFQQAYLQ-CDVIAGPVAPTVAWKL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G N+ + D+FT+ ++AGLP +S+P MP+GLQLIG +E L +V Sbjct: 418 GGHGND--PLADYLADIFTLPGSLAGLPGMSLPVGFGANHMPVGLQLIGNYLQEAKLLNV 475 Query: 477 GQIIEK 482 ++ Sbjct: 476 AHRFQQ 481 >gi|319951543|ref|ZP_08025347.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dietzia cinnamea P4] gi|319434791|gb|EFV90107.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dietzia cinnamea P4] Length = 484 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/490 (43%), Positives = 313/490 (63%), Gaps = 14/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL +E R+ ++++S+ E+ +++ I+ + ++NA++ V A +A AAA + D Sbjct: 1 MTELTTATAAELAGRIAAREVSSEEVTRAHLDRIDEVDGEINAFLHVGADEALAAARDVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ G+ L G+PI +KD F T T S IL+G+R Y++TVT +L + G +L Sbjct: 61 SRLAAGEELGPLAGVPIALKDVFTTTDAPTTCGSRILEGYRSPYDATVTGRLREAGIPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW TPGGS GGS+AA+A +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTRNPWDP-----SRTPGGSGGGSAAALASHQAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCGRTVEDTALLHQVIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T +++ +PD A + + G+ VG+ E+ + P ++ +++ + L++ Sbjct: 236 PRDSTSLDVAIPDVVGAAREGAKGDLTGLRVGVVSEFSGEGYQPGVEASFRAAVDTLREL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA+IVE+ P+ +YALPAYY+I P+E SSNLAR+D +RYGLR ++ +R GF Sbjct: 296 GAEIVEVYCPNFRYALPAYYLILPSEVSSNLARFDAMRYGLRTGEGSADQVMAASREAGF 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIM+GTY LS+ YD+ Y +A+K+RTLI RDF A+E+ VDV+++PTTPT+AFP Sbjct: 356 GPEVKRRIMLGTYALSAGYYDAFYGQAQKVRTLIARDFDAAYEK-VDVLVSPTTPTTAFP 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG + + +M D+ T+ +N+AG +SVP+ L + +P GLQ++ ++ L+ Sbjct: 415 LGDKVEDPVAMYQF--DLCTLPLNLAGHCGMSVPSGLVD-GLPAGLQIMAPALADDRLYR 471 Query: 476 VGQIIEKEAG 485 VG E G Sbjct: 472 VGAAYEAARG 481 >gi|323524442|ref|YP_004226595.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Burkholderia sp. CCGE1001] gi|323381444|gb|ADX53535.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia sp. CCGE1001] Length = 495 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/494 (44%), Positives = 311/494 (62%), Gaps = 22/494 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ IE + S +NA+I+V A A+ +D + G Sbjct: 5 SLTELRAALTAKECSAVELAQLYLKRIEAA-SGLNAFIQVDPDLTLAQAKAADALLHAGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F TKG + A S +L + +++TV ++L + G V +GK NMDEF Sbjct: 64 GGPLTGVPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVERLSNAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+G V +PW SSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGAVKNPWDRQAVPGG-----SSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+T + Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCALLLNAMAGFDERDSTSLV 238 Query: 248 LPVPDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DY R L Q Q G+ +G+PKEY L+ + + + + GA Sbjct: 239 RDDEDYTRYLGQPWQQGEAAKPLAGLRIGLPKEYFGAGLADDVRASIDAALKQYEALGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +VE+SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG Sbjct: 299 LVEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGP 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+G YVLS YD++YL+A+KIR +I +DF +AF++ DVI+ P P+ A+ LG Sbjct: 359 EVKRRIMVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQQAFKE-CDVIMGPVAPSVAWDLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLF 474 + ++ M DV+T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 AKGDDPVQM--YLADVYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARML 475 Query: 475 SVGQIIEKEAGYFR 488 V ++ + R Sbjct: 476 QVADAFQRATDWHR 489 >gi|326204191|ref|ZP_08194051.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium papyrosolvens DSM 2782] gi|325985702|gb|EGD46538.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium papyrosolvens DSM 2782] Length = 486 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/474 (42%), Positives = 290/474 (61%), Gaps = 10/474 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + + E+R L +K+ISAVEL Y+ I + ++ +Y+ V A A ++ Sbjct: 2 DITRLTIKEARGLLDNKEISAVELTRMYLDRINLLDGKVESYLSVTEDMAMENAHQAQNI 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I +G + L GIP+ IKD +G T S +L+ F Y +T KL + AV+LGK Sbjct: 62 IDSGKSSLLTGIPLSIKDNICIEGTKTTCASKMLEDFVSPYTATAVNKLLADNAVILGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMG S E S + +P+ PGGSSGGS+A V+ L S+G+DTGG Sbjct: 122 NLDEFAMGGSTENSAFKTTKNPFDL-----SRVPGGSSGGSAACVSASLALGSLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPASF G VG+KPTYG SR G+++FA S DQ G I +TV D AI+L +I G D D Sbjct: 177 SVRQPASFCGVVGMKPTYGLVSRYGLVAFASSFDQIGPIAKTVEDCAIILDSICGNDSKD 236 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT + + I+G +G+P+EY + L+ + + + I L+ GAKI E Sbjct: 237 ATSLKYKNDSSYSSSVSGDIKGFKIGLPQEYLTEGLNAEVKTSLYKSIDKLESMGAKIEE 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 S+P ++A+PAYY++S AEASSNL+RYDGV+YG R + K E+ +R+ FG+EVK Sbjct: 297 FSMPVLKHAVPAYYLMSSAEASSNLSRYDGVKYGYRADNCKTFNELIGKSRAEAFGKEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY L+S YD++Y +A K+RTLI F EAF + DV+L PT P +AF +G+ Sbjct: 357 RRILLGTYALASGYYDAYYKKALKLRTLISNGFNEAFSK-YDVVLHPTAPETAFKIGQNT 415 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 NN +M D++TVAVN+AGLP+ISVP + +P+GL G+P E+ +F Sbjct: 416 NNPLTM--YLADIYTVAVNIAGLPSISVPCGYDSQGLPIGLSFTGKPLGEKDIF 467 >gi|74316276|ref|YP_314016.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thiobacillus denitrificans ATCC 25259] gi|109891999|sp|Q3SM39|GATA_THIDA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|74055771|gb|AAZ96211.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Thiobacillus denitrificans ATCC 25259] Length = 485 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/465 (46%), Positives = 290/465 (62%), Gaps = 9/465 (1%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K +S+ EL Y+ I N +NA+I V +K A A +D I G A L G+PI Sbjct: 16 KQVSSRELAQQYLDRIAALNPTINAFITVDPEKTLAEAAAADALIAGGAAGPLTGVPIAH 75 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T G T S +L F Y++ V ++ G LGK NMDEFAMGSSNETS++ Sbjct: 76 KDIFCTDGWLTTCGSKMLANFVAPYDAHVIERCKAAGMPSLGKTNMDEFAMGSSNETSFF 135 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G V +PW + + PGGSSGG++A VA + A+ GTDTGGSIRQPA+ G G+KP Sbjct: 136 GAVKNPWNA-----GYVPGGSSGGAAACVAARMAPAATGTDTGGSIRQPAALCGITGLKP 190 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+I+FA SLDQAG + + D A LL I G+D D+T + DY R LD Sbjct: 191 TYGLVSRYGMIAFASSLDQAGPMAPSAEDCARLLNVITGFDPKDSTSLEREKEDYTRDLD 250 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + G+ VG+P E+ + L+ + ++ LK GA VEISL +++ A+P YY+++ Sbjct: 251 LPLTGLRVGLPCEFFAEGLNNEVAAAVDAAVNELKKLGATTVEISLANSRLAIPVYYVLA 310 Query: 319 PAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 PAEASSNL+R+DGVRYG R E D+ +MY TR+ GFG EVK RIMIGTYVLS YD+ Sbjct: 311 PAEASSNLSRFDGVRYGYRAPEYADLNDMYAKTRAQGFGAEVKRRIMIGTYVLSHGYYDA 370 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +YL+A+KIR LI DF EAF+ DVIL PT P +AF LG++ ++ M ND++T+ Sbjct: 371 YYLQAQKIRRLIAHDFAEAFKT-CDVILGPTAPGTAFKLGEKSDDPVEM--YLNDLYTIP 427 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 N+AGLP +S+P + +P+GLQL+G F E + +V ++ Sbjct: 428 ANLAGLPGMSLPCGFDSQGLPIGLQLVGDYFSEAKMLNVAHQYQR 472 >gi|300856836|ref|YP_003781820.1| glutamyl-tRNA amidotransferase subunit A [Clostridium ljungdahlii DSM 13528] gi|300436951|gb|ADK16718.1| glutamyl-tRNA amidotransferase, subunit A [Clostridium ljungdahlii DSM 13528] Length = 485 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/484 (41%), Positives = 311/484 (64%), Gaps = 11/484 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E R+ L++K+IS E+V SY+ I ++ + AY+ V + A A++ DK+I +G Sbjct: 3 LTAHEIRNMLKNKEISVEEIVRSYLNRINKFDTILGAYLYVEKEGALKRAKDLDKKIKHG 62 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD + KG+ S +L G+ Y+++V +++ +++GK NMD Sbjct: 63 EKMGGLFGIPISIKDNISVKGMQNSCASKMLQGYISPYDASVIKRIEAEDGIIIGKANMD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S + +PW D + PGGSSGGS+ +V+ S+GTDTGGS+R Sbjct: 123 EFAMGSSNEKSAFKLARNPW---DLSR--VPGGSSGGSAVSVSAGESVMSLGTDTGGSVR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA G VG+KPTYGR SR G ++FA +LDQ G+++ + D A L + IAG D+ D T Sbjct: 178 QPACLCGVVGLKPTYGRVSRYGAVAFASTLDQIGLMSADIEDCACLTQCIAGSDKNDFTT 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V++ VPDY ++L + I+GM +GIPKEY D L I K+ ++ + LK GA++ E S+P Sbjct: 238 VDMKVPDYSKSLTKDIKGMKIGIPKEYFEDGLDDRIRKSIEEAVDVLKANGAEVKECSIP 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +Y++ YY+I+ AE SSNLAR+DG+RYG R + KD ++Y +RS G EVK RIM Sbjct: 298 LVKYSMAVYYVIASAEVSSNLARFDGIRYGYRSKNFKDYRDLYFKSRSEALGMEVKRRIM 357 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY+LS YD +Y +A K+R LIK F E ++ D ++ PT+PT+AF +G+++ N+ Sbjct: 358 LGTYMLSKGYYDEYYEKALKVRNLIKNQFEEVMKE-FDALIAPTSPTTAFKIGEKKKNAL 416 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 SM +DV+ + N++G+PAISVP + + +P+G Q++ +RE+T+F++ E+ Sbjct: 417 SM--YLSDVYVLPANVSGMPAISVPCGMVD-GLPVGFQIMTNYYREDTIFNIAYSFEQST 473 Query: 485 GYFR 488 + + Sbjct: 474 NWHK 477 >gi|168019542|ref|XP_001762303.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686381|gb|EDQ72770.1| predicted protein [Physcomitrella patens subsp. patens] Length = 558 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 208/481 (43%), Positives = 313/481 (65%), Gaps = 20/481 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDL 71 R+ L ++ SAVE+ ++Y+ + + +++ V ++KA A+E D+R+ G + L Sbjct: 74 RESLVRREKSAVEVTEAYLVKLREQEPHVRSFLHV-SEKALQDAQELDRRVAEGREIGPL 132 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+G+KD T+ + + S IL G+ P Y++T KL +GA+++GK NMDEF MGS Sbjct: 133 AGVPLGVKDNLCTRDMPSTGGSRILQGYYPPYDATAVAKLRSSGAILVGKTNMDEFGMGS 192 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S Y +PW PGGSSGGS+AAVA CA ++G+DTGGSIRQPASF Sbjct: 193 STEGSAYQVTANPWDL-----SRVPGGSSGGSAAAVAAGQCAGALGSDTGGSIRQPASFC 247 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KP+YGR SR G++++A SLD G +V D+AILL+AIAG D+ D+TC VP Sbjct: 248 GVVGLKPSYGRVSRFGLMAYASSLDVVGCFGNSVMDAAILLEAIAGADKNDSTCSPQDVP 307 Query: 252 DYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY L + + G+ GI E D + + +Q ++ L+ GA + E+++ Sbjct: 308 DYTSNLLPIDDLGSKPLAGIRFGIISETIADGVVEDVLSAVKQAVTHLESLGASVREVAM 367 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P+ LPAYY+++ +EASSNLARYDGVRYG R G++++ MY N+R++GFG EVK RI+ Sbjct: 368 PNFSLGLPAYYVLATSEASSNLARYDGVRYGPRAHGEEVMSMYANSRALGFGPEVKRRIL 427 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD+ Y +A+++RT+I++DF A E+ VD++++P TPT+A+ +G++ N+ Sbjct: 428 MGTYALSAGYYDAFYKKAQQVRTVIQQDFKNALEE-VDLLISPVTPTAAYKIGEKVNDPL 486 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIE 481 +M D+ TV VN+AGLPA+ VP L + +P+GLQ+IG FREE++ G I E Sbjct: 487 AM--YVGDLMTVNVNLAGLPALVVPCGLAKGGTSGLPVGLQMIGPAFREESILRPGHIFE 544 Query: 482 K 482 + Sbjct: 545 Q 545 >gi|300858290|ref|YP_003783273.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium pseudotuberculosis FRC41] gi|300685744|gb|ADK28666.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium pseudotuberculosis FRC41] gi|302206010|gb|ADL10352.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium pseudotuberculosis C231] gi|308276245|gb|ADO26144.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium pseudotuberculosis I19] Length = 494 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 217/492 (44%), Positives = 317/492 (64%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++ +E ++ S+++++ E+ +++ I + +NA++ V ++A AAA+E D Sbjct: 9 SGLTSLSAAELAQKIHSRELTSREVTQAHLDRIAEVDPTLNAFLHVGVEEALAAADEVDA 68 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L G+PI +KD F T T S +L+G+ Y++TVT+KL G +L Sbjct: 69 ALDRGEAPASALAGVPIALKDVFVTTDAPTTCASKMLEGYVAPYDATVTKKLRAAGIPIL 128 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D+ TPGGS GG+SAA+A IGTD Sbjct: 129 GKTNMDEFAMGSSTENSAYGPTRNPW----DIDR-TPGGSGGGTSAALASGEAPLGIGTD 183 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 184 TGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHD 243 Query: 240 ECDATCVNLPV-PDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + DAT V+ PV P E A + + + G+ +G+ K++ D P + + + + L Sbjct: 244 KYDATSVDRPVAPVVEAAREGANGDLSGVKIGVVKQFDRDGYQPGVLEQFHVSVEQLTSQ 303 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR EG D E+ +R Sbjct: 304 GAEIVEVDCPHFDDALAAYYLILPCEVSSNLARFDGMRYGLR-EGDDGSHSADEVMSLSR 362 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++YL+A+++RTLI +DF A+E+ DV+++PTTPT Sbjct: 363 AAGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIAQDFAAAYEK-CDVLVSPTTPT 421 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFR 469 +AF LG++ ++ +M YN D+ T+ +N+AGL +SVPA L + +P+GLQ++ F Sbjct: 422 TAFKLGEKTSDPLAM---YNFDLCTLPLNLAGLCGMSVPAGLAKDTGLPVGLQIMAPAFC 478 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 479 DDRLYKVGAAFE 490 >gi|170693996|ref|ZP_02885152.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia graminis C4D1M] gi|170141068|gb|EDT09240.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia graminis C4D1M] Length = 495 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/501 (43%), Positives = 313/501 (62%), Gaps = 25/501 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E N ++E R L +K+ SAVEL Y++ I+ + +NA+I+V A A+ +D Sbjct: 1 MHEKN---LTELRAALAAKECSAVELAQLYLKRIDAARG-LNAFIQVDPDLTLAQAKAAD 56 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +G L G+PI KD F TKG + A S +L + +++TV ++L G V +G Sbjct: 57 ALLHSGHGGPLTGVPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVERLQSAGMVCVG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSSNE SY+GPV +PW SSGGS+AAVA L A+ GTDT Sbjct: 117 KTNMDEFAMGSSNENSYFGPVQNPWDRQAVPGG-----SSGGSAAAVAARLAPAATGTDT 171 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF+G GIKPTYGR SR G+I+FA SLDQ G + ++ D A LL A+AG+D+ Sbjct: 172 GGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCATLLNAMAGFDQ 231 Query: 241 CDATCVNLPVPDYERALDQS---------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 D+T + DY R L Q+ + G+ +G+PKEY L+ + + + Sbjct: 232 RDSTSLVRDDEDYTRYLGQAWKQDGAGKPLDGLRIGLPKEYFGAGLADDVRASVDAALKQ 291 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENT 350 + GA +V++SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ + Sbjct: 292 YEALGATLVDVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKS 351 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RIM+G YVLS YD++YL+A+KIR +I +DF EAF+Q DVI+ P P Sbjct: 352 RAEGFGPEVKRRIMVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKQ-CDVIMGPVAP 410 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQP 467 + A+ LG + ++ M D++T++V++AGLP +SVP + P+GLQ+IG Sbjct: 411 SVAWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGTNAQRPVGLQIIGNY 468 Query: 468 FREETLFSVGQIIEKEAGYFR 488 F E + V ++ + R Sbjct: 469 FNEARMLQVADAFQRATDWHR 489 >gi|78067928|ref|YP_370697.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia sp. 383] gi|109829651|sp|Q39BW3|GATA_BURS3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|77968673|gb|ABB10053.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia sp. 383] Length = 496 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/495 (44%), Positives = 308/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ IE + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIEAAR-DLNAFVHVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F T+G H+ A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 GGALTGLPIAHKDVFVTRGWHSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY D L+ + T + + GA Sbjct: 239 REDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGDGLADDVRATIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++G YVLS YD++YL+A+KIR +I DF EAF+ DVI+ P +PT A+ L Sbjct: 359 PEVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDVIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F E + Sbjct: 418 GSKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|116334210|ref|YP_795737.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit [Lactobacillus brevis ATCC 367] gi|122269107|sp|Q03Q16|GATA_LACBA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116099557|gb|ABJ64706.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Lactobacillus brevis ATCC 367] Length = 489 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/474 (44%), Positives = 304/474 (64%), Gaps = 13/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K ISA EL + I+ +++Q++A++ + A A + D++ + D + L GIP Sbjct: 15 LVAKKISARELTQATFDNIKTTDAQVDAFLTLNEDAALKQATKIDEQGVATD-QPLAGIP 73 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD TKG+ T A S +L F P Y++TVT+KL + +GK N+DEFAMG S E Sbjct: 74 VALKDNIVTKGLKTTAASKMLANFNPVYDATVTEKLAQAQMITVGKTNLDEFAMGGSTEN 133 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S + + W D T PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G VG Sbjct: 134 SAFKTTKNAW---DYTK--VPGGSSGGSAAAVASGQVLAALGSDTGGSIRQPAAFNGIVG 188 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I+F SLDQ G +TR+V+D+A +L AIAG+DE D T PVPD+ Sbjct: 189 LKPTYGRVSRWGLIAFGSSLDQIGPMTRSVKDNATMLSAIAGHDEHDLTSSTQPVPDFAA 248 Query: 256 ALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L S++GM +G+PKE+ D ++ + + + GA + E+SLPH +Y + A Sbjct: 249 DLTDATSVKGMRIGLPKEFLADGVADDVKQAILAAADTYRQLGATVDEVSLPHNKYGVAA 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII +EASSNL R+DG+RYG R + K++ ++Y +RS GFG EVK RIM+GT+ LS+ Sbjct: 309 YYIIGSSEASSNLQRFDGIRYGHRADDVKNLEDVYVKSRSEGFGDEVKRRIMLGTFSLSA 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD+++L+A K+RT+I DF +A + D I+ P PT AF +G E + +M ND Sbjct: 369 GFYDAYFLKAAKVRTVIMNDF-KAVLKDHDFIMGPVAPTPAFGIGDEIKDPITM--YMND 425 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 V T+ VN+AGLP +S+PA + +P+G+QLIG+PF E TL+ G E+ + Sbjct: 426 VLTIPVNLAGLPGLSLPAGFSQ-GLPVGMQLIGRPFDESTLYKAGYAFEQNTDF 478 >gi|194466909|ref|ZP_03072896.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus reuteri 100-23] gi|194453945|gb|EDX42842.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lactobacillus reuteri 100-23] Length = 490 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/485 (44%), Positives = 311/485 (64%), Gaps = 14/485 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++S+ D L +K ISA EL I+ + Q+ A+I + +A A E D + I+ D Sbjct: 7 SLSQLHDDLVNKKISATELTKETFDHIKGNEDQVKAFISLNEDQALKRAAEIDAKGISAD 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +KD TKG+ T A S +L+ F P Y++TV +KL + +GK N+DEF Sbjct: 67 QL-TAGVPLAVKDNILTKGLITTAASKMLENFNPVYDATVVEKLNAADYINVGKTNLDEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S + +PW D T PGGSSGGS+AAVA ++GTDTGGSIR P Sbjct: 126 AMGSSTENSAFFTTHNPW---DLTR--VPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYGR SR GII+F S DQ G +T+ V+D+A+L I+G DE D T Sbjct: 181 ASFNGVVGMKPTYGRVSRWGIIAFGSSFDQVGWLTQNVKDNALLTALISGNDERDMTSSL 240 Query: 248 LPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VPD+ L++ +++G+ + +PKEY D L + + + + L+ GA + E+SLP Sbjct: 241 KEVPDWAAQLNENTNVKGLRIAVPKEY-FDGLDEDVQEVIKAALDHLESLGAIVDEVSLP 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 HT+Y +PAYYI++ +EASSNL RYDG+RYG R + K++ ++Y +RS GFG+EVK RIM Sbjct: 300 HTKYGVPAYYILASSEASSNLQRYDGIRYGFRAADVKNLEDVYVRSRSEGFGEEVKRRIM 359 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+ LS+ YD+++ +A K+R LI +DF + F+ DVI+ T ++AF +G E ++ Sbjct: 360 LGTFSLSAGFYDAYFNKAAKVRRLIAQDFEDVFKDH-DVIVGATGASTAFKIGAEIDDPQ 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKE 483 +M NDV TV VNMAGLPA+S+PA K MP+GLQ+IG+ F E+T+++ G + E+ Sbjct: 419 TM--YMNDVLTVPVNMAGLPAMSIPAGFSAKNGMPVGLQIIGKAFDEQTVYNTGYVFEQT 476 Query: 484 AGYFR 488 + + Sbjct: 477 TDFHK 481 >gi|50842602|ref|YP_055829.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes KPA171202] gi|81611727|sp|Q6A8P5|GATA_PROAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|50840204|gb|AAT82871.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Propionibacterium acnes KPA171202] gi|315105718|gb|EFT77694.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL030PA1] Length = 501 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 308/488 (63%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQVYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|46579221|ref|YP_010029.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfovibrio vulgaris str. Hildenborough] gi|81567066|sp|Q72DX1|GATA_DESVH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|46448634|gb|AAS95288.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio vulgaris str. Hildenborough] gi|311233052|gb|ADP85906.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio vulgaris RCH1] Length = 489 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/486 (44%), Positives = 314/486 (64%), Gaps = 13/486 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ ++++ RD L +++ A + V + IE + +++A + + A+ A A D Sbjct: 1 MSALHTLSLAAIRDALARREVRAEDAVLDCLARIETTEPRIDALLHLRAEAAIEEARALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +R L G+P+ +KD T G T A S IL+ F P Y++ Q+L + GA++LG Sbjct: 61 AAGPDA-SRPLWGVPVTVKDALTTAGTPTTAGSRILEDFVPFYDAFAVQRLREAGAIILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y P +PW + PGGSSGGS+A+VA C AS+GTDT Sbjct: 120 KNNMDEFAMGSSTENSAYKPTRNPWDT-----ARVPGGSSGGSAASVAAGQCFASLGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS G VG+KPTYGR SR G+I++ SLDQ G +TRTV D+AI++ IAG+D+ Sbjct: 175 GGSIRQPASLCGCVGLKPTYGRVSRYGLIAYGSSLDQIGPMTRTVEDAAIVMGVIAGHDK 234 Query: 241 CDATCVNLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+TC + PV D+ AL + G+ +G+P E+ + LSP + + + + +D GA Sbjct: 235 RDSTCADRPVEDFAAALASRHDLAGVRIGVPAEFWGEGLSPEVATSCRAALDAARDLGAT 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 IV+++LPHT ++ AYYI++ AEASSNLARYDGVRYG R +D++++Y +RS G G Sbjct: 295 IVDVALPHTPQSIAAYYIVASAEASSNLARYDGVRYGKRAHAPEDLMDLYVRSRSEGLGD 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RIM+GTYVLSS YD++Y +A ++R I D+ AF DVI P +P +A+PLG Sbjct: 355 EVQRRIMLGTYVLSSGYYDAYYRKAAQVRRRILEDYRNAFAT-CDVICGPVSPVTAWPLG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSV 476 + M DVFT+++N+AGLP +S+P L E MP+G+QL+G+ F E TL SV Sbjct: 414 ALTADPLQM--YLMDVFTLSLNLAGLPGLSLPVGLGTESGMPVGIQLLGRSFDEATLLSV 471 Query: 477 GQIIEK 482 G ++ + Sbjct: 472 GNVLSR 477 >gi|328950487|ref|YP_004367822.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Marinithermus hydrothermalis DSM 14884] gi|328450811|gb|AEB11712.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Marinithermus hydrothermalis DSM 14884] Length = 478 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/484 (43%), Positives = 317/484 (65%), Gaps = 13/484 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E R+R+ ++S VE+ Y++ + + N ++NAYI + +A + AE +R+ G Sbjct: 1 MHAHEIVRRVRAGEMSPVEVTRRYLERVTDLNPKLNAYI-TINPEALSEAEAVAERMRQG 59 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 +A L G+P+ +KD T+G+ T S L+ F P Y++TV Q+L + GAV+LGK N+DE Sbjct: 60 EALPLAGVPVAVKDNIVTRGLRTTCASKSLERFVPPYDATVIQRLREAGAVILGKTNLDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S++G +PW + PGGSSGGS+AAVA L ++G+DTGGS+RQ Sbjct: 120 FAMGSSCEYSHFGATRNPWDL-----ERVPGGSSGGSAAAVAADLAPVALGSDTGGSVRQ 174 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+FTG +G KPTYGR SR G+++FA SLDQ G R+ RD A+L+ IAG D DAT + Sbjct: 175 PAAFTGVLGFKPTYGRVSRYGLVAFASSLDQIGPFARSTRDLALLMDVIAGPDPRDATSL 234 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +P P + AL+ ++G+T+G+ KE +P + + ++ + ++ G + VE+SLP Sbjct: 235 EVP-PRFVEALEARVEGLTIGMVKEALEAGNTPGVLEAVERFRTVMEGLGVRFVEVSLPS 293 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL AYY+++ +EASSNLARYDG + R EG+D++E+ +R+ GFG EV+ R+++G Sbjct: 294 LEYALAAYYLVATSEASSNLARYDGTLFSYRSEGEDLVEVMMRSRAEGFGPEVRRRVLMG 353 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+ LSS YD++Y +A K R I +DF AF Q DV+LTPT+PT AF LG++ + +M Sbjct: 354 TFALSSGYYDAYYGKALKARRRIYQDFEAAFAQA-DVLLTPTSPTPAFKLGEKTQDPLAM 412 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK--EA 484 +D TVAVN+AGLP +S+PA E +P+ +QLIG+ +E LF++ E+ +A Sbjct: 413 --YLSDTNTVAVNLAGLPGLSLPAG-NEDGLPVAVQLIGRALEDERLFTLSMAFERATDA 469 Query: 485 GYFR 488 Y + Sbjct: 470 AYLQ 473 >gi|171057197|ref|YP_001789546.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leptothrix cholodnii SP-6] gi|170774642|gb|ACB32781.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Leptothrix cholodnii SP-6] Length = 497 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 219/501 (43%), Positives = 305/501 (60%), Gaps = 23/501 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI---EVVAQKARAAAE 57 M+EL+ + ++E L + +S+VEL + + S + A++ E VA AA+ Sbjct: 1 MTELHQLDITELAALLDAGKVSSVELTRHQLARVAVHES-LGAFLCVDEDVALAQAGAAD 59 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 R I G A L G+PI KD F T+ + A S +L+G+R +++TV +L GAV Sbjct: 60 AWRARGIGGAAHRLLGVPIAHKDIFVTRDFPSTAGSKMLEGYRSPFDATVVSRLSAAGAV 119 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGKLN DEFAMG SNE S + P +PW + T + G ++ ++ V G + G Sbjct: 120 TLGKLNCDEFAMGGSNENSAWFPARNPWDTGRITGGSSGGSAAAVAARLVPG-----ATG 174 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGS+RQPASF G GIKPTYGRCSR G+I+FA SLDQAG + R+ D A LL+A++G Sbjct: 175 TDTGGSVRQPASFCGITGIKPTYGRCSRYGMIAFASSLDQAGPMARSALDCAHLLQAMSG 234 Query: 238 YDECDATCVNLPVPDY---ERAL------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 +D DAT VPD+ AL D+ + G+ +G+PKE+ D ++ + + Sbjct: 235 FDPRDATSAEQAVPDFVAQTTALREGATADRPLAGLRIGLPKEFFGDGVAADVLAATRAA 294 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMY 347 ++ L+ GA +V++SLP T+ ++P YYII+PAEASSNL+R+DGVRYG R E KD+ EMY Sbjct: 295 LAELEKLGATLVDVSLPRTELSIPVYYIIAPAEASSNLSRFDGVRYGHRAEQYKDLSEMY 354 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 +RS GFG EVK RIMIG YVLS YD++YL+A+K+R +I DF AF Q D+I P Sbjct: 355 SKSRSEGFGAEVKRRIMIGAYVLSHGYYDAYYLQAQKLRRMIADDFQAAFTQ-CDLIAGP 413 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 PT A PLG + S + D+FT+ ++AGLP ISVPA E +P+GLQLIG Sbjct: 414 VAPTVARPLGSQ---SDPVAEYLADIFTLPASLAGLPGISVPAGSGEAGLPVGLQLIGNY 470 Query: 468 FREETLFSVGQIIEKEAGYFR 488 +RE L G ++ + R Sbjct: 471 WREGALLHAGHAFQQATDWHR 491 >gi|111225212|ref|YP_716006.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Frankia alni ACN14a] gi|111152744|emb|CAJ64487.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Frankia alni ACN14a] Length = 519 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/478 (45%), Positives = 313/478 (65%), Gaps = 16/478 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++SAVE + + I + ++A++ V + A AAA D+R G+ L G+P+ + Sbjct: 44 ELSAVEATQAALDRIAKVDDTIHAFLHVDTEGALAAARSVDERRAAGERLGPLAGVPLAL 103 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD +G+ T S IL+G+ Y++TV +L V+LGK+NMDEFAMGSS E S Y Sbjct: 104 KDVLTARGMPTTCGSRILEGWHAPYDATVVGRLRAADVVLLGKVNMDEFAMGSSTENSAY 163 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW D+T PGGSSGGS+AAVA F +IGTDTGGSIRQPA+ G VG+KP Sbjct: 164 GPTRNPW---DTTR--IPGGSSGGSAAAVAAFEAPLAIGTDTGGSIRQPAAVCGLVGVKP 218 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERAL 257 TYG SR G+++F+ SLDQAG + RTV D+A+L AIAG+D D+T V++PVP E A Sbjct: 219 TYGGVSRYGLVAFSSSLDQAGPLARTVTDAALLHAAIAGHDPLDSTSVDVPVPAVVEAAG 278 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + I+G+ +G+ +E + P + + + L + GA++VE+S PH YAL AYY+I Sbjct: 279 RRDIRGLRIGVVRELAGEGYDPGVQAAFAAAVETLTELGAEVVEVSCPHFTYALAAYYLI 338 Query: 318 SPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +P+E SSNLAR+D +R+GLRV G D E+ TR GFG EVK RI++GTY LSS Sbjct: 339 APSECSSNLARFDAMRFGLRV-GDDGQAGAEEVMSRTREAGFGPEVKRRIILGTYALSSG 397 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A+K+RTLI RDF A+E+ VDV+++PTTPT AFPLG + ++ +M +D+ Sbjct: 398 YYDAYYGQAQKVRTLISRDFAAAYER-VDVLVSPTTPTPAFPLGSKVDDPVAM--YLSDL 454 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 T+ N+AG PA+S+PA L + +P+G+Q++ PF ++ L+ VG +E+ R H Sbjct: 455 CTIPSNLAGGPAMSLPAGLAD-GLPVGIQIMAPPFADDRLYLVGGALEEALDAQRGHS 511 >gi|319945176|ref|ZP_08019438.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lautropia mirabilis ATCC 51599] gi|319741746|gb|EFV94171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lautropia mirabilis ATCC 51599] Length = 503 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 207/482 (42%), Positives = 308/482 (63%), Gaps = 24/482 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII----NGD-ARD 70 L++ D+SA EL + + A S+ +NA+++V + A A+E+D R+ +G+ A Sbjct: 20 LQAGDVSARELAEHCLAAAAASD--INAFVDVQPELTLAQADEADARLAAARQSGERASP 77 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD F T+G + A S +L ++ +++TV +K+ + GAV +GKLN DEFAMG Sbjct: 78 LLGVPMAHKDVFVTRGWKSTAGSKMLADYQSPFDATVVRKVREAGAVCVGKLNCDEFAMG 137 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S NE S++GPV +PW SSGGS+AAVA L S GTDTGGS+RQPA+ Sbjct: 138 SGNENSFFGPVKNPWDPSRVAGG-----SSGGSAAAVAAGLVPVSTGTDTGGSVRQPAAM 192 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV---- 246 G GIKPTYGR SR G+I+FA SLDQAG+ R+ D A+LL A+AG+DE DAT + Sbjct: 193 CGVTGIKPTYGRVSRYGMIAFASSLDQAGVFARSAADCALLLSAMAGFDERDATSLRAPA 252 Query: 247 ----NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +P D+ D ++G+ VG+P E+ + L+P + + ++ + GA +V + Sbjct: 253 DDLATVPAADWGGNADMPLKGLRVGVPDEFLGESLAPAVRDAVRAALARFEALGATLVPV 312 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLPHT+ ++PAYY+I+PAEASSNLAR+DGVRYG R + D+ +Y N+R+ GFG EVK Sbjct: 313 SLPHTELSIPAYYVIAPAEASSNLARFDGVRYGHRSADASDLKSLYMNSRAEGFGPEVKR 372 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIMIGTYVLS YD++Y +A+++R +I DFT F VDVI P +P +A+P+G++ + Sbjct: 373 RIMIGTYVLSHGYYDAYYRKAQQLRRMIADDFTRVFAD-VDVIAGPVSPETAWPIGQQTD 431 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + + D++T+ ++AGLP +S+P +P+GLQL+G E L S+G + Sbjct: 432 D--PVRNYLADIYTLPASLAGLPGLSLPCGFDAAGLPVGLQLVGPALTEARLLSIGHTYQ 489 Query: 482 KE 483 + Sbjct: 490 QH 491 >gi|313837812|gb|EFS75526.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL037PA2] gi|314927307|gb|EFS91138.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL044PA1] gi|314972463|gb|EFT16560.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL037PA3] gi|328907396|gb|EGG27162.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium sp. P08] Length = 501 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 307/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E R+ ++ IS+ E+ +++ I++ + + A++ V A A D Sbjct: 1 MNELLTLTAAELGKRIAARQISSEEVTRAHLDRIDDVDGDIRAFLLVNHDGALDTARRID 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F KG+ T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEYLGPLAGVPLAVKDLFCAKGLATTASSRMLEGWVPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHEAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T ++ P P A Q+ + GM VG+ E D P ++ + + + L DAGA+ Sbjct: 236 AMDQTTIDQPTPTVVEAARQADVTGMRVGVVTELAGDGYDPQVEARFHEAVEMLTDAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLR+ +G+ E + TR GF Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRINDDGEHSAEQVMRATRGAGF 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RIM+GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIMLGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QTCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 LG E + M +D+ T+ NMAG PA S P L MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTIPANMAGGPAGSFPIGLSGADGMPVGMQVMAPVMADDRVY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|152980171|ref|YP_001351884.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Janthinobacterium sp. Marseille] gi|166217675|sp|A6SUD7|GATA_JANMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|151280248|gb|ABR88658.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Janthinobacterium sp. Marseille] Length = 485 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 15/468 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L SK ISA EL ++ I S+ +NA++ V A +D+R+ +GD L GIP Sbjct: 13 LHSKQISATELAQLFLDRIAQSD--LNAFLHVDPALTLKEAALADQRLASGDTTVLTGIP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I KD F T+ + A S +L+ + +++TV ++ G V LGKLN DEFAMGSSNE Sbjct: 71 IAHKDIFVTRDWRSTAGSKMLENYVSPFDATVVEQFKQAGMVHLGKLNCDEFAMGSSNEN 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G V +PW SSGGS+AA+A L AS TDTGGSIRQPA+ G G Sbjct: 131 SYFGAVKNPWDKAAIPGG-----SSGGSAAAIAARLTPASTATDTGGSIRQPAALCGVTG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+I+FA SLDQ G I +T D +LL A+ G+D D+T + D+ R Sbjct: 186 IKPTYGSVSRFGMIAFASSLDQGGPIAKTAEDCGLLLNAMTGFDPRDSTSIERDKEDFTR 245 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+Q +QG+ +G+P+EY L+ +++ + + + GA +V+ISLP T+ ++P YY Sbjct: 246 DLNQPLQGLKIGLPREYFGAGLAADVEQAVRAALKEYEKLGATLVDISLPKTELSIPTYY 305 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+R+DGVRYG R + D+ +MY TR+ GFG+EVK RI++G YVLS Sbjct: 306 VIAPAEASSNLSRFDGVRYGYRAKDYTDLSDMYRKTRAEGFGEEVKRRILVGAYVLSHGY 365 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LI +DF +AF Q DVI+ P PT A+ LG + ++ + + D+F Sbjct: 366 YDAYYLQAQKIRRLIAQDFQQAFTQ-CDVIMGPVCPTVAWDLGDKADD--PIANYLADIF 422 Query: 435 TVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREETLFSVGQ 478 T++ ++AGLP +S+P + K P+GLQ+IG F E L +V Sbjct: 423 TLSTSLAGLPGMSIPCGFGQGEKNSKRPVGLQIIGNYFAEAKLLNVAH 470 >gi|322390133|ref|ZP_08063667.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus parasanguinis ATCC 903] gi|321143164|gb|EFX38608.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus parasanguinis ATCC 903] Length = 488 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNHKTIEELHDLLVSKEISATELTQATLDDIKAREEAINAFVTVAEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-MSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYGP + W PGGSS GS+A+VA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGPTKNAWDQSK-----VPGGSSSGSAASVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENAQLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|145590197|ref|YP_001156794.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048603|gb|ABP35230.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 505 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/487 (43%), Positives = 304/487 (62%), Gaps = 29/487 (5%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 ++S+ EL ++ IE + + NAY++V A + A ++D+ I +G+A L GIP+ K Sbjct: 19 EVSSTELTQHFLGRIE-AGKRWNAYLDVNAHLSLEQASKADQLIYSGNAGKLTGIPVAHK 77 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKL--------WDNGAVMLGKLNMDEFAMGS 131 D F T+G + A S IL G++ +++TV L G V LGK NMDEFAMGS Sbjct: 78 DVFVTRGWKSTAASKILVGYQSPFDATVVANLGIPDENNPHGAGMVCLGKTNMDEFAMGS 137 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 SNE S +GPV++PW + SSGGS+AAVA L + GTDTGGSIRQPA+F Sbjct: 138 SNENSAFGPVLNPWNAAHVAGG-----SSGGSAAAVAAGLAPIATGTDTGGSIRQPAAFC 192 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G GIKP+YGR SR G+I++A SLDQAG + +T D A+LL A++ +D D+T + Sbjct: 193 GLTGIKPSYGRVSRYGMIAYASSLDQAGPMGKTAEDCALLLSAMSSHDPRDSTSLADSGE 252 Query: 252 DYERALDQ-----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DY R L+Q ++G+ VG+PKE+ + L+ + K+ + L++ GA +V Sbjct: 253 DYGRYLNQYWQEGSANPAKPLEGLRVGLPKEFFAEGLASDVAKSVNEAAKLLENLGATLV 312 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+SLP T+ ++P YY+++PAEASSNL+R+DGVRYG R E +D+ +MY +R+ GFG EV Sbjct: 313 EVSLPKTKLSIPVYYVLAPAEASSNLSRFDGVRYGYRAKEYRDLGDMYSKSRTEGFGAEV 372 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIMIGTYVL YD++YL+A+KIR +I DF AF Q DVIL P P A+ LG++ Sbjct: 373 KRRIMIGTYVLCHGYYDAYYLQAQKIRRIIAADFQAAFNQ-CDVILGPVAPDVAWRLGEK 431 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + M D++T++ N+AGLPA+SVP +P+G+QLIG F E L V Sbjct: 432 SKDPVQM--YLEDIYTLSTNLAGLPAMSVPCGFNANNLPIGMQLIGNYFSEARLLQVAHQ 489 Query: 480 IEKEAGY 486 ++ + + Sbjct: 490 YQQASDW 496 >gi|331695644|ref|YP_004331883.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudonocardia dioxanivorans CB1190] gi|326950333|gb|AEA24030.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudonocardia dioxanivorans CB1190] Length = 501 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/486 (44%), Positives = 313/486 (64%), Gaps = 18/486 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + +E ++ S+++SAVE +++ I + +++A++ V A+ A A+A D Sbjct: 1 MSELTRLTAAELAQKIHSREVSAVEAAQAHLDRIAAVDERVHAFLHVGAEAALASAALVD 60 Query: 61 KRIINGD---ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 + + + D A L G+P+ +KD T + T S IL+G+RP Y++TVT KL G Sbjct: 61 ESL-DADTPPASPLAGVPLALKDVLTTTDMPTTVGSRILEGWRPPYDATVTAKLRAAGVT 119 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK NMDEFAMGSS E S YGP +PW + D+ PGGS GGS+AA+A F +IG Sbjct: 120 ILGKTNMDEFAMGSSTEYSAYGPTHNPW----NLDRI-PGGSGGGSAAALAAFEAPLAIG 174 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPA+ TGTVG+KPTYG SR G+++ A SLDQAG RTV D+A+L + IAG Sbjct: 175 TDTGGSIRQPAAMTGTVGVKPTYGGVSRYGLVACASSLDQAGPCARTVLDAALLHEVIAG 234 Query: 238 YDECDATCVNLPVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +D D+T ++ PVP R + + G+ VG+ +E + + + + + L+ Sbjct: 235 HDPLDSTSIDAPVPAVVEAARRGAEGDLHGLRVGVVRELTGEGYQAGVQENFDAALRELE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRS 352 GA++VE+S PH QY L AYY+I P+E SSNLAR+D +RYGLRV+ G E+ TR Sbjct: 295 KLGAEVVEVSAPHFQYGLAAYYLILPSEVSSNLARFDAMRYGLRVDKGASAEEVMAATRE 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LSS YD++Y +A+K+RTLI RDF AFEQ DV+++PT PT+ Sbjct: 355 AGFGPEVKRRIILGTYALSSGYYDAYYGQAQKVRTLISRDFAAAFEQA-DVLVSPTAPTT 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 AFP+G + ++ +M ND+ T+ N+AG A+SVP+ + E +P GLQ++ E Sbjct: 414 AFPIGDKVDDPLAM--YLNDLATIPTNLAGTTAMSVPSGVAAEDGLPTGLQIMAPALGEA 471 Query: 472 TLFSVG 477 ++ VG Sbjct: 472 VMYRVG 477 >gi|307728162|ref|YP_003905386.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Burkholderia sp. CCGE1003] gi|307582697|gb|ADN56095.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia sp. CCGE1003] Length = 495 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/494 (43%), Positives = 309/494 (62%), Gaps = 22/494 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +++ SAVEL Y++ I+ + + +NA+I+V + A A+ +D + +G Sbjct: 5 SLTELRAALAARECSAVELAQLYLKRIDAA-AGLNAFIQVDPELTLAQAKAADALLHSGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ KD F TKG + A S +L + +++TV ++L G V +GK NMDEF Sbjct: 64 GGPLTGVPVAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVERLQTAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+GPV +PW SSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGPVKNPWDRQAVPGG-----SSGGSAAAVAARLVPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + ++ D A LL A+AG+D D+T + Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCATLLNAMAGFDSRDSTSLV 238 Query: 248 LPVPDYERALDQ---------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DY R L + + G+ +G+PKEY L+ + + + GA Sbjct: 239 RDDEDYTRYLGEPWKQGDAGKPLAGLRIGLPKEYFGAGLADDVRAAIDAALKQYEALGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 +VE+SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG Sbjct: 299 LVEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGP 358 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+G YVLS YD++YL+A+KIR +I +DF +AF Q DVI+ P P+ A+ LG Sbjct: 359 EVKRRIMVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQQAFTQ-CDVIMGPVAPSVAWDLG 417 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLF 474 + ++ M DV+T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 AKGDDPVQM--YLADVYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARML 475 Query: 475 SVGQIIEKEAGYFR 488 V ++ + R Sbjct: 476 QVADAFQRATDWHR 489 >gi|306834213|ref|ZP_07467333.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus bovis ATCC 700338] gi|304423786|gb|EFM26932.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus bovis ATCC 700338] Length = 488 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E + L +K+ISAVEL + ++ I+ + ++++I V + A A A D++ Sbjct: 3 FNTKSIDELHNLLVNKEISAVELTKATLEDIKEREAAVDSFITVSEEAALAQAAAVDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T+GI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA ++G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWNHSK-----VPGGSSGGSAAAVASGQVRLALGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL IAG+D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAGHDAKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + + GA + E+S Sbjct: 237 TSSDREVADFTAKIGQDIKGMKIALPKEYLGEGIDPEVKETILKAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYNNLEDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI RDF + F D+IL PT P+ AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFAD-YDLILGPTAPSVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP +S+PA + +P+G+QLIG + EET++ E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGLSIPAGFAQ-GLPVGMQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|325979026|ref|YP_004288742.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178954|emb|CBZ48998.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 488 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E + L +K++SAVEL + ++ I+ + ++++I V + A A A D++ Sbjct: 3 FNTKSIDELHNLLVNKEVSAVELTKATLEDIKEREAAVDSFITVSEEAALAQAAAVDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T+GI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA ++G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWNHSK-----VPGGSSGGSAAAVASGQVRLALGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL IAG+D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAGHDTKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + + GA + E+S Sbjct: 237 TSSDREVADFTAKIGQDIKGMKIALPKEYLGEGIDPEVKETILKAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYNNLEDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI RDF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+G+QLIG + EET++ E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGFAQ-GLPVGMQLIGSKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|289428348|ref|ZP_06430035.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes J165] gi|295130682|ref|YP_003581345.1| glutamyl-tRNA(Gln) and/aspartyl-tRNA(Asn) amidotransferase, A subunit [Propionibacterium acnes SK137] gi|289158497|gb|EFD06713.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes J165] gi|291376353|gb|ADE00208.1| glutamyl-tRNA(Gln) and/aspartyl-tRNA(Asn) amidotransferase, A subunit [Propionibacterium acnes SK137] gi|313772260|gb|EFS38226.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL074PA1] gi|313792045|gb|EFS40146.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL110PA1] gi|313802006|gb|EFS43240.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL110PA2] gi|313807617|gb|EFS46104.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL087PA2] gi|313810125|gb|EFS47846.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL083PA1] gi|313812847|gb|EFS50561.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL025PA1] gi|313815895|gb|EFS53609.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL059PA1] gi|313818654|gb|EFS56368.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL046PA2] gi|313820424|gb|EFS58138.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL036PA1] gi|313822770|gb|EFS60484.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL036PA2] gi|313825296|gb|EFS63010.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL063PA1] gi|313830454|gb|EFS68168.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL007PA1] gi|314915348|gb|EFS79179.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL005PA4] gi|314920178|gb|EFS84009.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL050PA3] gi|314925116|gb|EFS88947.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL036PA3] gi|314931701|gb|EFS95532.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL067PA1] gi|314955603|gb|EFT00005.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL027PA1] gi|314958000|gb|EFT02103.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL002PA1] gi|314960432|gb|EFT04534.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL002PA2] gi|314962700|gb|EFT06800.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL082PA1] gi|314967434|gb|EFT11533.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL037PA1] gi|314973455|gb|EFT17551.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL053PA1] gi|314976135|gb|EFT20230.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL045PA1] gi|314978605|gb|EFT22699.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL072PA2] gi|314983844|gb|EFT27936.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL005PA1] gi|314988023|gb|EFT32114.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL005PA2] gi|314989834|gb|EFT33925.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL005PA3] gi|315077917|gb|EFT49968.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL053PA2] gi|315084213|gb|EFT56189.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL027PA2] gi|315085557|gb|EFT57533.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL002PA3] gi|315088389|gb|EFT60365.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL072PA1] gi|315096002|gb|EFT67978.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL038PA1] gi|315098631|gb|EFT70607.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL059PA2] gi|315101366|gb|EFT73342.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL046PA1] gi|327326282|gb|EGE68072.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Propionibacterium acnes HL096PA2] gi|327331842|gb|EGE73579.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Propionibacterium acnes HL096PA3] gi|327443620|gb|EGE90274.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL013PA2] gi|327445824|gb|EGE92478.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL043PA2] gi|327448194|gb|EGE94848.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL043PA1] gi|327450685|gb|EGE97339.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL087PA3] gi|327453237|gb|EGE99891.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL092PA1] gi|327453976|gb|EGF00631.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL083PA2] gi|328753233|gb|EGF66849.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL025PA2] gi|328754104|gb|EGF67720.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL087PA1] gi|328760758|gb|EGF74324.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Propionibacterium acnes HL099PA1] gi|332675526|gb|AEE72342.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Propionibacterium acnes 266] Length = 501 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 308/488 (63%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|149175394|ref|ZP_01854015.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase [Planctomyces maris DSM 8797] gi|148845662|gb|EDL60004.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase [Planctomyces maris DSM 8797] Length = 485 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/476 (42%), Positives = 299/476 (62%), Gaps = 10/476 (2%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 SE ++ + ++S+ E+ + +Q I + +NA++ + + A AA D++ G+ Sbjct: 9 SELLAKMNAGEVSSEEITAACLQEIARRDDSINAFLSLQGETALEAARAVDRKRKAGEPL 68 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD KG T S +L+ F P Y++ + ++L AV++GK N+DEFA Sbjct: 69 GKLAGIPVALKDNICAKGATTTCASKMLEAFTPPYDAHIVEQLRAADAVLIGKTNLDEFA 128 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S + +PW + K GGSSGGS+AAV+ S+G+DTGGSIRQPA Sbjct: 129 MGSSTENSAFKTTANPWNT-----KCAAGGSSGGSAAAVSAGFAPLSLGSDTGGSIRQPA 183 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR G+++FA SLDQ G R V D+A+LL+ IAG D+ D T ++ Sbjct: 184 SFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPFARDVTDAALLLETIAGKDQRDTTSLDA 243 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VP Y + L+Q ++ + VG + + L + QQ + K GA+++ + LPH + Sbjct: 244 DVPSYTKNLEQPLKNLKVGYIEHLHEEGLHEDVKAATQQALEVYKSLGAELIPVELPHAK 303 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKHRIMIGT 367 Y + YYII+P+EASSNLARYDGV YG R + D +++MY +R FG EVK RIM+GT Sbjct: 304 YCVATYYIIAPSEASSNLARYDGVHYGHRAKQFDNMIDMYAASRGEAFGDEVKRRIMLGT 363 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LSS YD++YL+A K+R LI+ DF +AF Q VD+I +P TPT AF +G+ ++ +M Sbjct: 364 YALSSGYYDAYYLKALKVRRLIRNDFEQAF-QKVDIIASPVTPTPAFEIGELVDDPLAM- 421 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D+FT + N++G+P +S+PA + + ++P+GLQL+ P E L ++ E+E Sbjct: 422 -YLADIFTTSANLSGIPGVSIPAGMSQNQLPIGLQLLAPPLEEARLLRAARMFERE 476 >gi|296122528|ref|YP_003630306.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Planctomyces limnophilus DSM 3776] gi|296014868|gb|ADG68107.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Planctomyces limnophilus DSM 3776] Length = 501 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 209/468 (44%), Positives = 299/468 (63%), Gaps = 10/468 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L S ++ ++V+S + AI+ + + A++ V ++A AAE SD R G+ R L+G+ Sbjct: 27 LNSGTTTSRQIVESCLNAIDQRDGSIGAFLHVDRERALQAAEASDLRRSTGEVRGPLDGL 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD G S IL+G+ Y +TV +L GA+ LG++N+DEFAMGSS+E Sbjct: 87 PISIKDAICEAGQPATCASRILEGYVSPYSATVIDRLHAAGAIPLGRVNLDEFAMGSSSE 146 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y +PW D T TPGGSS GS+A+VA + S+G+DTGGSIRQPAS G V Sbjct: 147 NSAYQLTHNPW---DLTR--TPGGSSSGSAASVAARMVPGSLGSDTGGSIRQPASLCGVV 201 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+++FA SL+Q G + V +A LL+ IAG+D D+TCVN P DY Sbjct: 202 GLKPTYGRVSRYGLVAFASSLEQIGPFSLDVFGAAALLQTIAGHDPHDSTCVNTPAEDYL 261 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + LD + + +G+PKEY + L P + ++ ++ GAK+V + LPH++Y++ Y Sbjct: 262 QTLDTPLADLRIGVPKEYFGEGLDPEVQNIVEEALAVYTQHGAKLVPVELPHSKYSVATY 321 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+P+EASSNLAR+DG+ YG R D+ +Y +R GFG EVK RIM+GTY LS+ Sbjct: 322 YIIAPSEASSNLARFDGIHYGYRSPNFTDLESLYAASRGEGFGPEVKRRIMLGTYALSAG 381 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 D +Y++A +IR LI++DF AF+Q DVI P TPT AF LG+ ++ +M +D+ Sbjct: 382 YADKYYVKALQIRRLIRQDFDAAFQQ-CDVIAGPVTPTPAFKLGELADDPLAM--YLSDI 438 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +T+A N+AG+PAIS+PA +P+GLQL G F E L +++E Sbjct: 439 YTIAANLAGIPAISIPAGWTASGLPVGLQLQGPVFTESRLLRAARMLE 486 >gi|313677418|ref|YP_004055414.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Marivirga tractuosa DSM 4126] gi|312944116|gb|ADR23306.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Marivirga tractuosa DSM 4126] Length = 474 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/465 (41%), Positives = 284/465 (61%), Gaps = 11/465 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 + L+ + S +V+ Y++ IE Q+N +++V +A A A++ ++ +G L Sbjct: 11 QQELKQEKYSLNSVVEHYLKQIE-EQKQLNVFLDVYETEALAKADQLQMKLKDGKPLGKL 69 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+ IGIKD + ++ S IL GF + T Q+L D A+++G N DEFAMGS Sbjct: 70 FGLVIGIKDVLVHQNHEVRSASEILKGFESQFTGTAVQRLLDEDAIIIGAQNCDEFAMGS 129 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 SNE S +GP ++ + PGGSSG S+ AV LC AS+GTDTGGS+RQPA+F Sbjct: 130 SNENSAFGPTLNA-----ADHSRVPGGSSGASAVAVQAGLCMASLGTDTGGSVRQPAAFC 184 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VGIKPTY R SR G+I+FA S D GI + + D+A +L+ IAGYDE D+T VP Sbjct: 185 GVVGIKPTYSRVSRYGLIAFASSFDCIGIFSNNIEDNARILEVIAGYDEYDSTVSTEEVP 244 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 DY L + + + + + L+ I + + WLK G ++ E++ PH Y L Sbjct: 245 DYASNLHINKKLKIAYVKETIENEALNSEIKEATISKLEWLKKEGHQVEEVTFPHLDYVL 304 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 P YYI++ AEAS+NL+R+DGVRYG R E ++ MY+ +RS GFG+EVK RIM+GT+VL Sbjct: 305 PTYYILTTAEASTNLSRFDGVRYGYRAPEAHNMESMYKLSRSQGFGEEVKRRIMLGTFVL 364 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S+ +D++Y +A+K+R +I RD T D I+ PTTPT+AF LG +N M Sbjct: 365 SASYFDAYYTKAQKVRRII-RDETREMLSEYDFIIMPTTPTTAFQLGTNRDNPAEM--YL 421 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 D+FTV N++G+PAIS+P + + +P+GLQ++ F+E L++ Sbjct: 422 EDIFTVQANVSGIPAISIPNGVDAQNLPIGLQIMTDVFKEIELYA 466 >gi|169632546|ref|YP_001706282.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii SDF] gi|229485757|sp|B0VS13|GATA_ACIBS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169151338|emb|CAP00054.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter baumannii] Length = 492 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 221/479 (46%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E L S+ EL + Y++ I + Q+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAKGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALCEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GAK Sbjct: 236 KDSTSVKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDAEVKARVEESLKKLEEMGAK 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|313764357|gb|EFS35721.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL013PA1] Length = 501 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 308/488 (63%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVTRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|160893123|ref|ZP_02073911.1| hypothetical protein CLOL250_00669 [Clostridium sp. L2-50] gi|156865206|gb|EDO58637.1| hypothetical protein CLOL250_00669 [Clostridium sp. L2-50] Length = 488 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 203/485 (41%), Positives = 289/485 (59%), Gaps = 10/485 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E ++++ +IS +E + I+ I+ + + N +I V + A AEE K+I +G Sbjct: 4 MTAVELGKKIKAGEISVMEATKACIENIKTYDKEYNCFITVDEEGAFKQAEEIQKKINSG 63 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+PI IKD G+ T S IL F P Y S KL + GAV++GK NMD Sbjct: 64 ELTSPLAGVPIAIKDNMCQNGVLTTCASKILSNFVPTYTSDAVVKLMEAGAVIVGKTNMD 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ ETSYYG +PW D+ ++ A CA +G+DTGGSIR Sbjct: 124 EFAMGSTTETSYYGETKNPW---DTNKVPGGSSGGSAAAVAAEEVPCA--LGSDTGGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G GIKPTYGR SR G++++ SLDQ G + + V D A +L+ I+ YD+ D+T Sbjct: 179 QPAAFCGVTGIKPTYGRVSRYGLVAYGSSLDQIGPLAKDVTDCATILEIISRYDKKDSTS 238 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V D+ AL ++GM +G+PK+Y + L P I LK+ GA + E L Sbjct: 239 VERTDNDFTSALKDDVKGMRIGLPKDYFTEGLDPEIKDAVYHVAEVLKEKGAIVEEFDLG 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +YA+PAYYII+ AEASSNL R+DGV+YG R E D+ MY+ TRS GFG EVK RIM Sbjct: 299 MVEYAIPAYYIIASAEASSNLERFDGVKYGYRTAEYTDLHNMYKKTRSEGFGAEVKRRIM 358 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G++ LSS YD++Y++A K++ LIK+ + +AF + D+IL P PT+A +G E+ S Sbjct: 359 LGSFTLSSGYYDAYYVKALKVKALIKQAYDKAFAK-YDIILGPVAPTTALTMG--ESLSD 415 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + DV+TV VN+AGLP IS+P + MP+G+Q++G F E+ + E+ Sbjct: 416 PIKMYLGDVYTVPVNLAGLPGISLPCGYDKDGMPIGVQMVGDAFNEKAIIQAAYAFEQTR 475 Query: 485 GYFRP 489 Y +P Sbjct: 476 EYKQP 480 >gi|159036758|ref|YP_001536011.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Salinispora arenicola CNS-205] gi|189045260|sp|A8M5E6|GATA_SALAI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157915593|gb|ABV97020.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Salinispora arenicola CNS-205] Length = 491 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/497 (43%), Positives = 309/497 (62%), Gaps = 17/497 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++ +E + + SA E+ +++ I + +++A++ V + A AA D Sbjct: 1 MTDLTSLSAAELAGLVARGESSAAEVTQAHLDRITAVDDRVHAFLHVDTEGALDAARAVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+P+ +KD TKGI T A S IL G+RP Y+ST+ ++L G VML Sbjct: 61 ARRAAGEPLGPLAGVPVAVKDVLTTKGIPTTAGSRILAGWRPPYDSTIVRRLRAAGTVML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +GP +PW PGGS GGS+AA+A + SIG+D Sbjct: 121 GKTNMDEFAMGSSTEYSAFGPTHNPWDL-----SRIPGGSGGGSAAALAAYETPLSIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G+++F+ SLD G RTV D+A+L +AI G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGGTSRYGLVAFSSSLDTPGPCARTVLDAALLHEAIGGHD 235 Query: 240 ECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVPD A + G+ +G+ +E+ + P + ++ + L Sbjct: 236 PSDSTSIPAPVPDVVAAARLGASGDLAGVRLGVVREFAGEGAEPGVLAAFRAAVDTLTKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRS 352 GA++VE+S PH QYALPAYY+I+P+E SSNLAR+DGVR+GLRV + + E+ TR Sbjct: 296 GAEVVEVSCPHFQYALPAYYLIAPSECSSNLARFDGVRFGLRVGDDGNRSLEEVMSATRE 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK R+++GTY LSS YD++Y +A+K+RTLI RDFT AFEQ VD +++PTTP Sbjct: 356 AGFGPEVKRRVVLGTYALSSGYYDAYYGQAQKVRTLITRDFTTAFEQ-VDALVSPTTPFV 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AFP+G + M D+FT+ N+ G P ISVP L + +P+GLQ++ ++ Sbjct: 415 AFPVGARTADPYQM--YLADLFTIPSNLYGGPGISVPCGLAD-GLPVGLQVMAPTMADDR 471 Query: 473 LFSVGQIIEKEAGYFRP 489 ++ V +E G F P Sbjct: 472 MYRVAAALESAVGPFTP 488 >gi|117927905|ref|YP_872456.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidothermus cellulolyticus 11B] gi|166217640|sp|A0LSR0|GATA_ACIC1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|117648368|gb|ABK52470.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acidothermus cellulolyticus 11B] Length = 505 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 221/488 (45%), Positives = 311/488 (63%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L E + ++++SA E+ +++ I + ++A++ V A A AA D Sbjct: 1 MSDLIRRTAVELAAMIAAREVSAEEVTRAHLDRIAAVDPAVHAFLYVDADGALTAARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ G+ L G+P+ +KD F T+G+ T S IL+G+ P Y++TV QK+ D G V+L Sbjct: 61 ARLAAGERLGPLAGVPLALKDVFTTRGMPTTCGSKILEGWIPPYDATVVQKIRDAGIVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +GP +PW PGGSSGGS+AAVA F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAFGPTRNPWDL-----SRIPGGSSGGSAAAVAAFEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TG VG KPTYG SR G+++F+ SLDQAG RTV D+A L AIAG+D Sbjct: 176 TGGSIRQPAAVTGIVGTKPTYGGVSRYGLVAFSSSLDQAGPFARTVLDAAYLHAAIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DAT ++ PVPD A + ++G+ +G+ +E D P + + Q + L D GA Sbjct: 236 PRDATSIDAPVPDVVAAARNGDVRGLRIGVVRELDGDGYDPGVRHQFHQAVKLLADLGAD 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 + E+S PH +YAL AYY+I+P+E SSNLAR+D +RYGLR+ G D E+ TR+ G Sbjct: 296 VGEVSCPHFEYALAAYYLIAPSECSSNLARFDAMRYGLRL-GDDGTRTAEDVMALTRAAG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIM+GTY LSS Y+++Y A+K+RTLI +DF AFE+ DV+++PTTPT+AF Sbjct: 355 FGAEVKRRIMLGTYALSSGYYEAYYGSAQKVRTLIIQDFAAAFEK-FDVLISPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 PLG+ ++ M D+ T+ VN+AG A+SVP + +P+GLQ++ ++ L Sbjct: 414 PLGERVDDPLKM--YLADLDTIPVNLAGNAAMSVPIGCSPDDGLPVGLQIMAPVLADDRL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YRVGAALE 479 >gi|315080541|gb|EFT52517.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL078PA1] Length = 501 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 307/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + + A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIRAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|306832101|ref|ZP_07465255.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425540|gb|EFM28658.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 488 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 306/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E + L +K+ISAVEL + ++ I+ + ++++I V + A A A D++ Sbjct: 3 FNTKSIDELHNLLVNKEISAVELTKATLEDIKEREAAVDSFITVSEEAALAQAAAVDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T+GI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA ++G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWDHSK-----VPGGSSGGSAAAVASGQVRLALGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL IAG+D DA Sbjct: 177 IRQPAAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAGHDTKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + + GA + E+S Sbjct: 237 TSSDREVADFTAKIGQDIKGMKIALPKEYLGEGIDPEVKETILKAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYNNLEDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI RDF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+G+QLIG + EET++ E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGFAQ-GLPVGMQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|325180202|emb|CCA14603.1| glutamyltRNA(Gln) amidotransferase subunit putative [Albugo laibachii Nc14] Length = 527 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/490 (43%), Positives = 299/490 (61%), Gaps = 19/490 (3%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E+ + L IS+ EL I+ I++S +NA++ ++ + E+D R G + Sbjct: 25 EASEALTQGRISSAELTKLCIEQIKSSK-HLNAFVYTDFDRSIRLSREADLRRKFGKSIG 83 Query: 71 -LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+GIPIG+KD F + + T ACS +L F YEST T +L D GA+ +GKLNMDEF M Sbjct: 84 ILDGIPIGVKDNFCMENVPTTACSKMLSDFVSPYESTATNRLLDAGAIPMGKLNMDEFGM 143 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA-ASIGTDTGGSIRQPA 188 GS S +GP +PW S+D ++ G S G SAA C A++G+DTGGS+RQPA Sbjct: 144 GSGTLYSEFGPTKNPW-SLDWDEQAVVAGGSSGGSAAAVASGCCFAALGSDTGGSVRQPA 202 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ G VG+KP+YGR SR G+IS+A SLD G++ +TV D+A++L+AI+G D DAT + Sbjct: 203 AYCGIVGLKPSYGRVSRHGLISYASSLDTVGVLAKTVGDAAVMLEAISGPDGRDATALQT 262 Query: 249 PVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P D+ D + VGIP EY + LSP I W QGI WL+ AGAK+V+ISLP T Sbjct: 263 EGPSDWS---DDKWSDLVVGIPAEYHVTELSPEIIDVWNQGIEWLRRAGAKVVDISLPTT 319 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR----------VEGKDILEMYENTRSIGFGQ 357 + LP+YYII+ AEASSNL+RYDGVR+G R + + ++Y TRS GFG+ Sbjct: 320 KLCLPSYYIIACAEASSNLSRYDGVRFGHRATYPADATTGLPSATLHDLYSRTRSEGFGK 379 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI++GTY+LSS+ +Y RA +R I DF F GVD++LTPTT + F + Sbjct: 380 EVQRRILLGTYMLSSKAVQGYYDRAWDLRQRICSDFQRIFANGVDLLLTPTTTSVPFSML 439 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLFSV 476 + + M NDV TVA N+A +PAIS+PA + + +PLGLQL+ E L Sbjct: 440 RVREENDGMTMYLNDVMTVAANLARIPAISIPAHISRTESLPLGLQLMSAMNNEHKLLQG 499 Query: 477 GQIIEKEAGY 486 +++E + Sbjct: 500 ARMLENAVAF 509 >gi|86742325|ref|YP_482725.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Frankia sp. CcI3] gi|109829733|sp|Q2J6U6|GATA_FRASC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|86569187|gb|ABD12996.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Frankia sp. CcI3] Length = 508 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 225/476 (47%), Positives = 313/476 (65%), Gaps = 16/476 (3%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 +SAVE + + I + ++A++ V A A AAA D R G+ L G+P+ +K Sbjct: 34 LSAVEATRAALDRIAKVDETVHAFLHVDADGALAAARSVDDRRAAGERLGPLAGVPLALK 93 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D F T+G+ T S IL+G+ P Y++TV +L V+LGK NMDEFAMGSS E S +G Sbjct: 94 DVFTTRGMPTTCGSRILEGWHPPYDATVVSRLRAADVVLLGKANMDEFAMGSSTENSAFG 153 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 P +PW D T PGGSSGGS+AAVA F ++GTDTGGSIRQPA+ G VG+KPT Sbjct: 154 PTRNPW---DVTR--IPGGSSGGSAAAVAAFEAPLALGTDTGGSIRQPAALCGLVGVKPT 208 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YG SR G+++F+ SLDQAG + RTV D+A+L AIAG+D D+T V+ PVP A Q Sbjct: 209 YGGVSRYGLVAFSSSLDQAGPLARTVTDAALLHAAIAGHDPLDSTSVDAPVPAVVAAARQ 268 Query: 260 -SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 I+GM VG+ +E+ D P ++ + + L GA++VE+S PH YALPAYY+I+ Sbjct: 269 RDIRGMRVGVVREFAGDGYDPGVEAAFAAAVEALTGLGAQVVEVSCPHFSYALPAYYLIA 328 Query: 319 PAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P+E SSNLAR+D +R+GLR+ G D E+ TR GFG EVK RI++GTY LSS Sbjct: 329 PSECSSNLARFDAMRFGLRI-GDDGRAGAEEVMSRTREAGFGPEVKRRIILGTYALSSGY 387 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y +A+K+RTLI RDFT AFEQ VDV+++PTTPT AFPLG + ++ +M +D+ Sbjct: 388 YDAYYGQAQKVRTLISRDFTAAFEQ-VDVLVSPTTPTPAFPLGAKVDDPVAM--YLSDLC 444 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 T+ N+AG PA+S+P+ L + +P+G+Q++ PF ++ L+ VG +E+ R H Sbjct: 445 TIPSNLAGGPAMSLPSGLVD-GLPVGIQIMAPPFADDRLYRVGGALEEALDVGRGH 499 >gi|296198913|ref|XP_002746922.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Callithrix jacchus] Length = 526 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 201/491 (40%), Positives = 293/491 (59%), Gaps = 25/491 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFLCAASIGTD 179 +GPV +PW + K P SG S + F C A++G+D Sbjct: 132 DGVFGPVKNPWSYSKQYREKRKQNPHSESGDSDWLITGGSSGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRYVDDAAIVLGVLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V + P +L + + + +GIPKEY + LS I W + + GAK+ Sbjct: 252 PKDSTTVPINKPLVLSSL-EDVSKLCIGIPKEYLVPELSSEIQSLWSRAADLFESEGAKV 310 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 +E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 IEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDIDVSTEAMYAATRREGFNDV 370 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 V+ RI+ G + L Y++++++A+K+R LI DF AF GVDV+LTPTT + A P Sbjct: 371 VRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPYLE 430 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 KE+N + S +D+FT AVNMAGLPA+++P AL + +P+GLQ IG+ F ++ L + Sbjct: 431 FIKEDNRTRSA---QDDIFTQAVNMAGLPAVNIPIALSNQGLPIGLQFIGRAFCDQQLLT 487 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 488 VAKWFEKQVQF 498 >gi|328885214|emb|CCA58453.1| Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces venezuelae ATCC 10712] Length = 498 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/482 (44%), Positives = 314/482 (65%), Gaps = 16/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E ++ + +++AVE+ ++++ IE + +++A++ V + A A A D++ G Sbjct: 8 LTAAEIAGKIAAGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRARG 67 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD F T G+ T S IL+G+ P Y++T+ + L V+LGK NMD Sbjct: 68 EKLGPLAGVPLALKDIFTTAGMPTTVGSKILEGWIPPYDATLVKNLKAADVVILGKTNMD 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D T PGGS GGSSAA+A + +IGTDTGGSIR Sbjct: 128 EFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALAAYEAPLAIGTDTGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L +AIAG+D D+T Sbjct: 183 QPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIAGHDPLDSTS 242 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + S+ GM VG+ K++R + + + + + + LK GA+IVE+ Sbjct: 243 IDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLKSLGAEIVELDC 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVK 360 P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR GFG EVK Sbjct: 303 PTFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTALTREAGFGDEVK 361 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY LSS YD++Y A+K+RTLI R+F +AFE VDVI++PTTPT+AFP+G+ Sbjct: 362 RRIILGTYALSSGYYDAYYGSAQKVRTLITREFEKAFED-VDVIVSPTTPTTAFPIGERA 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L+ VG Sbjct: 421 DD--PMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLYKVGAA 478 Query: 480 IE 481 +E Sbjct: 479 VE 480 >gi|313838828|gb|EFS76542.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL086PA1] Length = 501 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 308/488 (63%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVIRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMCRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|312863920|ref|ZP_07724158.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus vestibularis F0396] gi|322516182|ref|ZP_08069115.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus vestibularis ATCC 49124] gi|311101456|gb|EFQ59661.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus vestibularis F0396] gi|322125358|gb|EFX96713.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus vestibularis ATCC 49124] Length = 488 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNNKTIEELHDLLVSKEISATELTQATLDDIKEREEAVNAFVTVAEETALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+A+VA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAASVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G + TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSPTVKENAQLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGNEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|186474825|ref|YP_001856295.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia phymatum STM815] gi|229485863|sp|B2JJW2|GATA_BURP8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|184191284|gb|ACC69249.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia phymatum STM815] Length = 497 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 223/496 (44%), Positives = 317/496 (63%), Gaps = 24/496 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K SAVEL +Y++ IE+ + +NA++ V AQ+ A A+ +D I G+ Sbjct: 5 SLTELRAALDAKQCSAVELAQTYLKRIEDRKA-LNAFVHVDAQQTLAQAQAADALIAAGN 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F T+ + A S +L+ + +++TV +L G V +GK NMDEF Sbjct: 64 AGPLTGLPIAHKDVFVTRNWRSTAGSKMLENYTSPFDATVVDRLAQAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE SY+GPV +PW K PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSYFGPVQNPWDR-----KAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G GIKPTYGR SR G+I+FA SLDQ G + +T D A+LL A+ G+DE D+T + Sbjct: 179 ASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQTAADCALLLNAMGGFDERDSTSLT 238 Query: 248 LPVPDYERAL-----------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 DY R L D+ + G+ VG+PKEY L+ + + + + G Sbjct: 239 HDHEDYTRYLGQDWSGAGNARDKPLAGLRVGLPKEYFGAGLADDVRASIDAALKQYEALG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGF 355 A +VE+SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ GF Sbjct: 299 ATLVEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRAEGF 358 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF DVI+ P P+ A+ Sbjct: 359 GPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFRH-CDVIMGPVAPSVAWD 417 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREET 472 +G + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E Sbjct: 418 IGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEAR 475 Query: 473 LFSVGQIIEKEAGYFR 488 + V ++ + R Sbjct: 476 MLQVADAFQRATDWHR 491 >gi|291545266|emb|CBL18375.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ruminococcus sp. 18P13] Length = 488 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/483 (43%), Positives = 303/483 (62%), Gaps = 14/483 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +++ R L SK ISA EL D+Y++ I + + +YI V ++A A AE++ R Sbjct: 2 DLQNTTLTQLRQLLDSKSISAAELTDAYLERIRAVDGSLLSYITVTPEEAHAQAEQAQAR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+A L GIP+ +KD T G+ T S +L+ F P Y++TV +KL +MLGK Sbjct: 62 IDAGNAAPLTGIPMAMKDNLCTDGVRTTCSSRMLEDFVPPYDATVVEKLKAQNYIMLGKA 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +MDEFAMGSSN+TS + +P+ + PGGSSGGS+AAV+ LCAA++G+DTGG Sbjct: 122 SMDEFAMGSSNQTSAFAKTRNPYDT-----SCVPGGSSGGSAAAVSAGLCAAALGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G G+KPTYGR SR G+++FA SLDQ G I R RD +L AIAG D D Sbjct: 177 SIRQPASFCGVTGLKPTYGRVSRYGLVAFASSLDQIGPIARCARDCGTVLSAIAGQDPHD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 AT VPD+ + +S++G+ + +PKE+ D + + + + GA++V+ Sbjct: 237 ATSAPQSVPDFNEKVGKSLKGLKIALPKEFFGDAVDDEVKEAVLAAAREYQSMGAELVDC 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 S+ +YA+ AYY+I+ AEA+SNLAR+DG++YGLR EG +M ++RS GFG EVK R Sbjct: 297 SISTLKYAVAAYYLIASAEAASNLARFDGIKYGLRGEGNSFDKMIRDSRSRGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---QGVDVILTPTTPTSAFPLGKE 419 I++G Y LSS YD++Y +A +K+DF + ++ Q D+ILTPT PT A+P+GK+ Sbjct: 357 ILLGNYALSSGYYDAYYRKA----LALKQDFIKEYDRIFQNADIILTPTAPTVAYPIGKQ 412 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E++ M D+ TV VN+A LPAIS MP+G+ LIG+ F E T+ Sbjct: 413 EHDPVKM--YTGDICTVTVNIACLPAISTTCGYSRTGMPIGMSLIGRRFDEATIIQAADA 470 Query: 480 IEK 482 E+ Sbjct: 471 FEQ 473 >gi|317125497|ref|YP_004099609.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Intrasporangium calvum DSM 43043] gi|315589585|gb|ADU48882.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Intrasporangium calvum DSM 43043] Length = 508 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/491 (44%), Positives = 316/491 (64%), Gaps = 20/491 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + +E + L SK IS+VE+ +Y+ I + Q++AY+ V A+ A A D Sbjct: 3 TDLTRASAAELAEGLASKSISSVEVTQAYLDRIAAVDGQVHAYLHVDAEGALTTARAVDA 62 Query: 62 RIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+ L G+PI +KD T+G+ T S +L+G+ P Y++TV + L D G +LG Sbjct: 63 RRAAGERLATLAGVPIAVKDVMTTRGLPTTCGSRMLEGWVPPYDATVVRHLKDAGMPILG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YGP +PW + PGGS GGSSAAVA F + GTDT Sbjct: 123 KTNMDEFAMGSSTEHSAYGPSRNPWDL-----ERIPGGSGGGSSAAVASFQAPLATGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVG KPTYG SR G+++ A SLDQAG RTV D+A+L + + G+D Sbjct: 178 GGSIRQPAAVTGTVGTKPTYGGVSRYGLVALASSLDQAGPCARTVLDTALLHEVMGGHDP 237 Query: 241 CDATCVNLPVP---DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T ++ PVP D R D + G+ +G+ KE + P + + +++ ++ L + GA Sbjct: 238 LDSTSIDAPVPPVVDAARRAD--VTGLRIGVVKELGGEGYQPGVRERFEESVALLVEQGA 295 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDIL---EMYENTRS 352 ++VE+S P YAL AYY+I P+EASSNLA++D +RYG+RV EG D ++ TR Sbjct: 296 EVVEVSCPSFDYALAAYYLILPSEASSNLAKFDAMRYGMRVLPEGVDAPTAEQVMAATRD 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LSS YD++Y A+K+R+LI +DF A+E+ VDV+L+PT PT+ Sbjct: 356 AGFGPEVKRRIILGTYALSSGYYDAYYGSAQKVRSLIAQDFERAYEK-VDVLLSPTAPTT 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREE 471 AF LG + ++ M ND+ T+ N+AG+P +S+P+ L E+ +P G+Q++ ++E Sbjct: 415 AFKLGDKLDD--PMAMYLNDIATIPANLAGVPGMSIPSGLAEEDGLPTGIQILAPAMKDE 472 Query: 472 TLFSVGQIIEK 482 L+SVG +E+ Sbjct: 473 RLYSVGAALEQ 483 >gi|148996839|ref|ZP_01824557.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP11-BS70] gi|168576845|ref|ZP_02722695.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae MLV-016] gi|307067081|ref|YP_003876047.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A-like amidase [Streptococcus pneumoniae AP200] gi|147757414|gb|EDK64453.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP11-BS70] gi|183577489|gb|EDT98017.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae MLV-016] gi|306408618|gb|ADM84045.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase [Streptococcus pneumoniae AP200] gi|332202342|gb|EGJ16411.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA41317] Length = 488 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 301/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ + D+ + Q I+GM + +PKEY + ++P + +T Q + GA + E+S Sbjct: 237 TSAHVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETIQSAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|296875908|ref|ZP_06899968.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus parasanguinis ATCC 15912] gi|296433070|gb|EFH18857.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus parasanguinis ATCC 15912] Length = 488 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNHKTIEELHDLLVSKEISATELTQATLDDIKAREEAVNAFVTVAEEVALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYGP + W PGGSS GS+A+VA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGPTKNAWDHSK-----VPGGSSSGSAASVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + A + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLEATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|317132012|ref|YP_004091326.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ethanoligenens harbinense YUAN-3] gi|315469991|gb|ADU26595.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ethanoligenens harbinense YUAN-3] Length = 484 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/473 (45%), Positives = 303/473 (64%), Gaps = 11/473 (2%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIG 77 K SAVE+ ++++ IE + ++ A++ V ++A A A E D+++ G+ L G+P+ Sbjct: 18 KKASAVEIAEAHLARIEAVDERVGAFLTVTKEEALARAAEQDRKLAAGEPLGALSGVPVA 77 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD TKG+ T S +L F P Y++TV KL + GAVM+GK NMDEFAMGSS ETS+ Sbjct: 78 VKDNICTKGVRTTCASKMLHNFTPPYDATVADKLREAGAVMVGKTNMDEFAMGSSCETSH 137 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 + +P R ++ PGGSSGGS+AAVA ++G+DTGGSIRQPA+ G VG+K Sbjct: 138 FKKTHNP-RDLECV----PGGSSGGSAAAVAAGEVPLALGSDTGGSIRQPAALCGVVGLK 192 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYG SR G+++FA SLDQ G RT D+A+LL AI G D DAT + L Sbjct: 193 PTYGAVSRYGLVAFASSLDQIGPFARTADDTALLLDAIKGRDTHDATSAHREQAPVAGTL 252 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 D +++G+ +GIP+ Y D + + L+ AGA +V++SL T+YALP YYI+ Sbjct: 253 DGNVKGLRIGIPQAYYGDGVDDAVKTQVLDTARALEQAGAALVDVSLSSTRYALPTYYIL 312 Query: 318 SPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + AEASSNLAR+DGV+YG R E D+L +YEN+RS GFG EVK RIM+GT+VLSS YD Sbjct: 313 ACAEASSNLARFDGVKYGYRTEHYDDLLSLYENSRSEGFGDEVKRRIMLGTFVLSSGYYD 372 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 ++Y +A+ + LI+ ++ AF DVILTPT+P +AF +G E + + D+ TV Sbjct: 373 AYYHKAKLTQNLIRGEYDAAF-GACDVILTPTSPVTAFKIG--ERTADPLQMYAADICTV 429 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VN+AGLPA+S+P + +P+GLQ IG+ F E T+ + + +E+ G P Sbjct: 430 PVNIAGLPAVSLPCGEVD-GLPVGLQFIGRKFEERTILNAAKAVEQICGTAVP 481 >gi|212704305|ref|ZP_03312433.1| hypothetical protein DESPIG_02360 [Desulfovibrio piger ATCC 29098] gi|212672267|gb|EEB32750.1| hypothetical protein DESPIG_02360 [Desulfovibrio piger ATCC 29098] Length = 486 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/484 (44%), Positives = 314/484 (64%), Gaps = 12/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + ++ D L+ K+I A E + + I + ++ A + V A+ A A A + D Sbjct: 1 MNEICSLNLTALADALQKKEIGAEEATRACLDRIAATEERVGALLHVDAEGALARARQLD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + ++ L G+P+ +KD +T+G+ T A S IL+G+ P Y++ Q+L + GAV+LG Sbjct: 61 AQGPDA-SQPLWGVPVTVKDALSTQGMPTTAGSRILEGYIPVYDAFAVQRLREAGAVILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMGS+ E S Y +PW + PGGSSGGS+A+VA C AS+G+DT Sbjct: 120 KNNLDEFAMGSTTENSAYKTTHNPWDL-----QRVPGGSSGGSAASVAACQCFASLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS G GIKPTYGR SR G+I++ SLDQ G + R+V D A +L IAG+D+ Sbjct: 175 GGSIRQPASLCGCTGIKPTYGRVSRYGLIAYGSSLDQIGPLGRSVADCARVLGVIAGHDQ 234 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DATC PV DY+ A S++G +G+PKE+ + L+P + ++ I + GA+I Sbjct: 235 RDATCDPRPVDDYDAAAAAPSLKGARLGLPKEFYAEGLAPEVRAVCEKAIETARAEGAEI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQE 358 VE+SLPHT A+ YYII+ AEASSNLAR+DGVRYG R + K + E+Y +RS GFGQE Sbjct: 295 VEVSLPHTNAAIATYYIIAMAEASSNLARFDGVRYGHRAADVKQLAELYVRSRSEGFGQE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI++GTYVLSS YD+++ +A ++R LI+ ++ A EQ D +L P +P +A+ +G Sbjct: 355 VKRRILLGTYVLSSGYYDAYFRKAAQVRRLIRDEYLAALEQ-CDALLAPVSPVTAWEMGC 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVG 477 + M D +T+++N+AGLP +S+P + E KMP+G+QLIG+ F E LF +G Sbjct: 414 HSADPLQM--YLMDAYTLSLNLAGLPGLSLPVGMAAESKMPVGMQLIGKAFDEAGLFRLG 471 Query: 478 QIIE 481 +E Sbjct: 472 AGLE 475 >gi|167585097|ref|ZP_02377485.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia ubonensis Bu] Length = 496 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 219/495 (44%), Positives = 309/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAAQ-DLNAFVHVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 AGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +GPV +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGPVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL +AG+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCALLLNVMAGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY D L+ + + + GA Sbjct: 239 RADEDFTRHLGQPWAPGNDAGKPLAGLRIGLPNEYFGDGLAADVRAAVDAALKAYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI+IGTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT A+ + Sbjct: 359 PEVKRRILIGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTVAWDI 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F E + Sbjct: 418 GAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|317154026|ref|YP_004122074.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Desulfovibrio aespoeensis Aspo-2] gi|316944277|gb|ADU63328.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio aespoeensis Aspo-2] Length = 485 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/486 (43%), Positives = 312/486 (64%), Gaps = 13/486 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ +S L+ +I+ + V + + IE + + A I V+ +AR+ AE D Sbjct: 1 MSELHTETLSRLAGLLQGGEITVAQAVTACLDRIEATEPSVRALITVMVDEARSEAEAMD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + ++ L G+P+ +KD T+G+ T S IL+ F P Y++T +L + GAV++G Sbjct: 61 A-LGPDPSKPLWGVPVVLKDLLTTRGVRTTCGSKILEDFVPFYDATTVTRLREAGAVIIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW + PGGSSGGS A+VA C A++GTDT Sbjct: 120 KANMDEFAMGSSTENSAYFQTANPWDT-----ARVPGGSSGGSGASVAAGQCFAALGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PASF G VG+KPTYGR SR G+I++ SLDQ G +TR+V D+A +L+ IAG+D Sbjct: 175 GGSIRLPASFCGIVGVKPTYGRVSRYGLIAYGSSLDQIGPMTRSVEDAARVLQVIAGHDP 234 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V+ PVPDY L + S+ G+T+G+P+EY + + + + ++ + GAK Sbjct: 235 RDSTSVDTPVPDYLAGLGRDSLAGVTIGLPREYWGEGIDAEVAGACRAAVARAEALGAKT 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQE 358 V +SL T YA+ YYII+ AEASSNL+R+DGVR+G R + +++++MY +R+ GFG E Sbjct: 295 VPLSLSLTDYAIATYYIIAMAEASSNLSRFDGVRFGHRSQKAEELIDMYTASRTEGFGDE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V+ RI++GTYVLSS YD++Y +A K+R L+++DF A Q D+I P PT+AF G Sbjct: 355 VQRRIIMGTYVLSSGYYDAYYNKAAKVRRLLRQDFDAALSQ-CDLIAGPVCPTTAFKAGA 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVG 477 + + + D+FT+++N+AGLP +S+P L + MP+GLQL+G+PF E + SV Sbjct: 414 KAD---PLQMYLMDIFTISLNLAGLPGMSLPVGLGADSGMPVGLQLMGRPFEEAAMLSVA 470 Query: 478 QIIEKE 483 +E+ Sbjct: 471 DCLERH 476 >gi|333024266|ref|ZP_08452330.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces sp. Tu6071] gi|332744118|gb|EGJ74559.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces sp. Tu6071] Length = 497 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/488 (44%), Positives = 322/488 (65%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ + + + +++ S +++AV++ ++++ IE + +++A++ V + A A A D Sbjct: 1 MTDIIRLTAARTAEKIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+ L G+P+ +KD F T+G+ T S IL+G+ P Y++TVT++L D V+L Sbjct: 61 EKRARGEKLGPLAGVPLALKDIFTTEGVPTTVGSKILEGWIPPYDATVTRRLKDADVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + + GM VG+ K++R + + + + + + LK+ GA+ Sbjct: 236 PLDSTSIDAPVPPVVEAARNGGVVGMRVGVVKQFRGEGYQAGVVQRFDESVELLKELGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 IVE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR G Sbjct: 296 IVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTAITRGEG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK R+++GTY LSS YD++Y A+K+RTLI +DF AFEQ VDVI++PTTPT+AF Sbjct: 355 FGPEVKRRVILGTYALSSGYYDAYYGSAQKVRTLITQDFARAFEQ-VDVIVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ++ ++E L Sbjct: 414 PIGERSDD--PMAMYLADLCTIPANLAGNAAMSLPCGLAPEDGLPVGLQIVAPAMKDERL 471 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 472 YKVGAAVE 479 >gi|167768561|ref|ZP_02440614.1| hypothetical protein CLOSS21_03120 [Clostridium sp. SS2/1] gi|167710085|gb|EDS20664.1| hypothetical protein CLOSS21_03120 [Clostridium sp. SS2/1] gi|291560522|emb|CBL39322.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [butyrate-producing bacterium SSC/2] Length = 490 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 220/491 (44%), Positives = 302/491 (61%), Gaps = 11/491 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L AV E +++ K+I+ VE + ++ I+ S ++ Y+ + A AEE Sbjct: 1 MSILELTAV-ELGKKIKDKEITVVEATKAALEQIKAVESDVHGYVSYDEESALKRAEEVQ 59 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I +G L G+P+ IKD TKG T S IL+ F P Y + + L G V L Sbjct: 60 KGIDDGTYTGPLAGVPMAIKDNICTKGYTTTCSSKILENFVPTYSAQAVENLIKEGVVFL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS YG +PW DK PGGSSGGS+AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAYGVTKNPW----DLDK-VPGGSSGGSAAAVAANECFMALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS+ G GIKPTYG SR G+I++ SLDQ G + + V D A LL+AIA +D Sbjct: 175 TGGSIRQPASYCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPLAKDVTDCATLLEAIASHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E D+T V L D+ AL ++GM +GIPK+Y + L + + L++ GA + Sbjct: 235 EKDSTSVRLESYDFTSALKDDVKGMKIGIPKDYFGEGLDEEVKEAVLAAAKTLEEKGAIV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E L +YA+PAYY+I+ AEASSNL+R+DGV+YG R + + L MY+ TRS GFG E Sbjct: 295 EEFDLGLVEYAIPAYYVIAAAEASSNLSRFDGVKYGYRAKDYEGLHNMYKKTRSEGFGAE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK++F +AFE+ DVIL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKKEFDKAFEK-YDVILGPVAPTTAPKLG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ S + D++T++VN+AGLP IS+P + MP+GLQLIG F E+ + Sbjct: 413 -DSLSDPIKMYLGDIYTISVNLAGLPGISLPCGKDKNGMPIGLQLIGDCFNEKKIIQAAY 471 Query: 479 IIEKEAGYFRP 489 E+ Y P Sbjct: 472 TFEQTRAYEAP 482 >gi|239625353|ref|ZP_04668384.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519583|gb|EEQ59449.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 498 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/476 (43%), Positives = 290/476 (60%), Gaps = 13/476 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +SEL + + ++ ++AVE V + ++ I+ ++AY+ V + A A E Sbjct: 3 LSELTALELGR---HIKEGRVTAVEAVQAALERIKALEPSIHAYVTVDEEGALKRASEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI G + G+P+ +KD TKG+ T S IL F P Y + L GAV+L Sbjct: 60 GRIEAGTLTGPVAGVPMAVKDNMCTKGLKTTCSSRILYNFIPTYTAQAVLNLEQAGAVIL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +G +PW + PGGSSGGS AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGVTRNPWNP-----EHVPGGSSGGSCAAVAAGECFYALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP+SF G GIKPTYG SR G+I++ SLDQ G + + V D A +L+ +AG+D Sbjct: 175 TGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVSDCAAILETLAGHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V D+ AL ++GM +G+P+ Y + L P + + + LK+ GA + Sbjct: 235 PKDSTSVRRDSYDFTSALVDDVKGMRIGVPESYLGEGLDPEVREAVLEAARVLKEKGAVV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 L YA+PAYY+I+ AEASSNL+R+DGV+YG R D L MY+ +RS GFG E Sbjct: 295 ETFDLKLVDYAIPAYYVIASAEASSNLSRFDGVKYGYRTPDYDGLHSMYKKSRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK++F AFE+ DVIL P +P +A LG+ Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKQEFDRAFER-FDVILAPASPDTAPRLGE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + M D++T++VN+AGLP ISVP K +P+GLQLIG F+E+ + Sbjct: 414 SLRDPLKM--YLGDIYTISVNLAGLPGISVPCGRDSKGLPIGLQLIGDCFKEKDII 467 >gi|313637422|gb|EFS02885.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Listeria seeligeri FSL S4-171] Length = 418 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 203/419 (48%), Positives = 278/419 (66%), Gaps = 10/419 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PIGIKD TK + T A S IL+ F P Y++TV KL + + +GKLNMDEFAMG Sbjct: 4 LAGMPIGIKDNIVTKNLRTTAASKILENFDPIYDATVISKLKNAQTINIGKLNMDEFAMG 63 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS ETSY+ +PW PGGSSGGS++AVA S+G+DTGGSIRQPA+F Sbjct: 64 SSTETSYFHKTHNPWDL-----SRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAF 118 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+I+FA SLDQ G IT+ V D+A LL+AI+G D D+T +N PV Sbjct: 119 CGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPV 178 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + +L I+G+ +G+PKEY + + P + + + L+ GA E+SLPH++Y Sbjct: 179 ERFSDSLTGDIKGLRIGVPKEYLGEGVDPGVKQAVLDALKTLEKLGATWDEVSLPHSEYG 238 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYV 369 + +YYI++ +EASSNL+R+DGVRYG R L E+Y+ TRS GFG EVK RIM+GTY Sbjct: 239 VASYYILASSEASSNLSRFDGVRYGYRSPNATTLEELYKKTRSEGFGDEVKRRIMLGTYA 298 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD++Y +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ +M Sbjct: 299 LSSGYYDAYYKKAQQARTLIKQDFVNVFEN-YDVIIGPSSPTTAFKIDGMINDPITM--Y 355 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ND+ TV +N++G+PAISVP + +P+GLQ+IG F E L+ V E+ + + Sbjct: 356 SNDILTVPINLSGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQATTFHK 413 >gi|239502365|ref|ZP_04661675.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii AB900] gi|332853446|ref|ZP_08434765.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Acinetobacter baumannii 6013150] gi|332728652|gb|EGJ60020.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Acinetobacter baumannii 6013150] Length = 492 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 220/479 (45%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + Q+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|306825783|ref|ZP_07459122.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432144|gb|EFM35121.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 488 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 206/486 (42%), Positives = 300/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A A+ D+ Sbjct: 3 FNHKTIEELHNLLVSKEISATELTQTTLEDIKSREEDLNSFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGLIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGVVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETIIKAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDASNLDEIYINSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|126310783|ref|XP_001378493.1| PREDICTED: similar to Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Monodelphis domestica] Length = 683 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/500 (43%), Positives = 299/500 (59%), Gaps = 24/500 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E L+ IS VEL + I + +NAYI V KA AEES+KR G Sbjct: 161 LSLREVSAALKQGQISPVELCRKCLSRIRETRF-LNAYITVSEDKALKQAEESEKRYEKG 219 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A L+GIPI IKD F+T GI T SH+L G+ P Y +TV QKL D GAV+LGK N+D Sbjct: 220 RALGILDGIPIAIKDNFSTAGIETTCASHMLKGYIPPYNATVVQKLLDQGAVLLGKTNLD 279 Query: 126 EFAMGSSNETSYYGPVISPW---------------RSMDSTDKFTPGGSSGGSSAAVAGF 170 EFAMGS + +GPV +PW R + ++ GGSSGGS+AAV+ F Sbjct: 280 EFAMGSGSTDGIFGPVRNPWSYSRQYREKRKPNHHRVDEDSNWLITGGSSGGSAAAVSAF 339 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 C A++G+DTGGS R PA+ G VG+KPTYG SR G+I S+D GI+TR V D+AI Sbjct: 340 TCFAALGSDTGGSTRNPAALCGLVGLKPTYGLVSRYGLIPLVNSMDVPGILTRCVDDAAI 399 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +L +AG+D D+T PV + + + + + +GIPKEY LS W + Sbjct: 400 VLGILAGHDVKDSTTTQDPVGPFILPILRDVSKLCIGIPKEYHTPGLSSETQALWSKAAD 459 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYEN 349 + GAK+VE+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R E MY Sbjct: 460 LFESKGAKVVEVSLPHTSYSIVCYHVLCTAEVASNMARFDGLEYGHRCNVNVSTEAMYAA 519 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GF V+ RI+ G + L YD ++++A+K+R LI DF + F GVD++LTPTT Sbjct: 520 TRREGFNDVVRGRILSGNFFLLKENYDDYFVKAQKVRRLIANDFVKVFNSGVDILLTPTT 579 Query: 410 PTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + A P KE+N + S D+FT +VNMAGLPAI+VP AL + +P+GLQLIG+ Sbjct: 580 LSDAVPYVEFIKEDNRTRSA---QGDIFTQSVNMAGLPAINVPMALSSQGLPVGLQLIGR 636 Query: 467 PFREETLFSVGQIIEKEAGY 486 F ++ L +V + E++ + Sbjct: 637 AFSDQQLLTVARWFEEQVQF 656 >gi|289425319|ref|ZP_06427096.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes SK187] gi|289154297|gb|EFD02985.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes SK187] Length = 501 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 307/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTL +RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLTQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|84498246|ref|ZP_00997043.1| glutamyl-tRNA amidotransferase subunit A [Janibacter sp. HTCC2649] gi|84381746|gb|EAP97629.1| glutamyl-tRNA amidotransferase subunit A [Janibacter sp. HTCC2649] Length = 507 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 217/489 (44%), Positives = 307/489 (62%), Gaps = 16/489 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + SE D L + S+VE+ ++ + + +S ++AY+ V A A+A + D+ Sbjct: 3 TDLTRASASELADLLTKGETSSVEVTEALLARTDAVDSDVHAYLHVARDSALASARDIDE 62 Query: 62 RIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+ L G+PI +KD ATKG+ T S IL+G+ P Y++TV +L G +LG Sbjct: 63 RRGRGEQLHQLAGVPIAVKDVMATKGLPTTCGSKILEGWIPPYDATVVTRLRQAGMPILG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YGP +PW D+ PGGS GGSSA VA F +IGTDT Sbjct: 123 KTNMDEFAMGSSTEHSAYGPTRNPW----DLDRI-PGGSGGGSSAVVASFQAPLAIGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVG KPTYG SR G+++ A SLDQAG TR V D+A+L + + G+D Sbjct: 178 GGSIRQPAAVTGTVGTKPTYGGVSRYGLVALASSLDQAGPCTRNVLDAALLHEVMGGHDP 237 Query: 241 CDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +N PVP E A ++GM +GI +E + + + + + L DAGA++ Sbjct: 238 MDSTSINAPVPPVVEAARRADVKGMRIGIVRELTGEGFQAGVQARFDESVQHLVDAGAEV 297 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKD---ILEMYENTRSIG 354 VE+S P AL AYY+I P+EASSNLA++D +R+GLRV EG D ++ TR G Sbjct: 298 VEVSCPSFTAALAAYYLILPSEASSNLAKFDAMRFGLRVLPEGIDDPSAEQVMAATRDAG 357 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTY LSS YD++Y A+K+R LI DFT+AFE DV+++PT PT+AF Sbjct: 358 FGDEVKRRIILGTYALSSGYYDAYYGSAQKVRRLIADDFTKAFEV-ADVLVSPTAPTTAF 416 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 G + ++ M ND+ T+ N+AG+P +S+P+ L E +P G Q++ +E L Sbjct: 417 KFGDKMDD--PMAMYLNDIATIPANLAGVPGMSLPSGLADEDGLPAGFQILAPAAADERL 474 Query: 474 FSVGQIIEK 482 ++VG +E+ Sbjct: 475 YAVGAALEQ 483 >gi|306835910|ref|ZP_07468903.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium accolens ATCC 49726] gi|304568184|gb|EFM43756.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium accolens ATCC 49726] Length = 495 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/492 (42%), Positives = 321/492 (65%), Gaps = 22/492 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E D++ ++++++ E+ +++ I +N ++N+++ V ++A AAA+ DK + Sbjct: 11 LTSLTAAELADKIHAREVTSREVTQAFLDRIAETNPELNSFLHVGQEEALAAADAVDKAL 70 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ A L G+P+ +KD T T A S +L+G+ Y++TVT++L + G +LGK Sbjct: 71 DAGEKPASALAGVPLALKDLLVTTDAPTTAASKMLEGYMSPYDATVTKRLREAGIPILGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSSNE S +GPV +P+ + + TPGGS GG++AA+A IGTDTG Sbjct: 131 TNLDEFAMGSSNENSAFGPVHNPYDT-----ERTPGGSGGGTAAALASGQAPLGIGTDTG 185 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG+D Sbjct: 186 GSIRQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPCGRTVLDTALLHEVIAGHDAF 245 Query: 242 DATCVNLP-VPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT V+ P P E A + + + G+ VG+ K++ D + + + + L++ GA Sbjct: 246 DATSVDKPAAPVVEAAREGANGDLSGVKVGLIKQFERDGWQDGVMENYHAAVEQLREQGA 305 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 +IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D ++ +R+ Sbjct: 306 EIVEVDCPHFDEALAAYYLIMPCEVSSNLARFDGMRYGLRA-GDDGSHSAEQVMSQSRAE 364 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LS YD++YL+A+++RTL+ +DF AFEQ VDV+++PTTPT+A Sbjct: 365 GFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLVAQDFARAFEQ-VDVLVSPTTPTTA 423 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 F LG++ + +M YN D+ T+ +N+AGL +SVP+ + + +P GLQ++ F+++ Sbjct: 424 FKLGEKAEDPMAM---YNFDLCTLPLNLAGLCGMSVPSGMAADTNLPTGLQIMAPAFQDD 480 Query: 472 TLFSVGQIIEKE 483 L+ VG E + Sbjct: 481 RLYKVGAAYEAK 492 >gi|229485759|sp|A3M8F1|GATA_ACIBT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|193078235|gb|ABO13195.2| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter baumannii ATCC 17978] Length = 492 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 219/479 (45%), Positives = 316/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + Q+ +Y+ V +++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTSEQALREADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNGTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E++ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EIQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|78356067|ref|YP_387516.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109829695|sp|Q313S5|GATA_DESDG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78218472|gb|ABB37821.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 487 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/489 (43%), Positives = 313/489 (64%), Gaps = 13/489 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ ++E+ L ++A E V + I IE + ++A + ++A A A D Sbjct: 1 MAQIYAQTLTETAAALAQGTLTAEEAVRACIDRIEATEPAVHALLATRCEEALAEARAMD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + A+ L G+P+ +KD +T G+ T S IL+ + P +++ +L D GAV+L Sbjct: 61 AAGYD-PAKPLWGVPVTVKDVLSTSGVATTCGSRILENYVPFFDAAAVSRLKDAGAVILA 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S + +PW + PGGSSGGS+A+VA C AS+GTDT Sbjct: 120 KTNMDEFAMGSSTEKSAFKTTHNPWDL-----QRVPGGSSGGSAASVAAGQCFASLGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPASF G VG+KPTYGR SR G++++ SLDQ G +TR+V D+A +L IAG+D Sbjct: 175 GGSVRQPASFCGCVGLKPTYGRVSRYGLVAYGSSLDQIGPVTRSVEDAARVLAVIAGHDA 234 Query: 241 CDATCVNLPVPDYERALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D TC + PV DY AL + G+ +G+P EY + LS +D ++ + ++ GA Sbjct: 235 RDTTCSDRPVDDYLAALGSRSDLAGLRIGVPAEYWGEGLSGEVDSCCREALKKAEELGAT 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQ 357 +V+ISLP++++A+ YYI++ AEASSNLAR+DGVR+G R + L E+Y N+RS GFG Sbjct: 295 LVDISLPNSRHAIAVYYIVAMAEASSNLARFDGVRFGHRSDNAASLPELYINSRSEGFGD 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RIM+GTYVLSS YD++Y +A ++R LI +DF +AFEQ DVI P +P +A+ G Sbjct: 355 EVQRRIMLGTYVLSSGYYDAYYRKAAQVRRLILQDFEKAFEQ-CDVICGPASPVTAWKHG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSV 476 + +M + D+FT+++N+AGLP +S+P E MP+GLQ++G+ F E TL SV Sbjct: 414 AMSGDPLTMYLL--DIFTISLNLAGLPGLSLPVGTGTESGMPVGLQILGKAFDEATLLSV 471 Query: 477 GQIIEKEAG 485 ++E+ G Sbjct: 472 AHVLEQRIG 480 >gi|227501731|ref|ZP_03931780.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium accolens ATCC 49725] gi|227077756|gb|EEI15719.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium accolens ATCC 49725] Length = 495 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/492 (43%), Positives = 321/492 (65%), Gaps = 22/492 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E D++ ++++++ E+ +++ I +N ++N+++ V +A AAA+ DK + Sbjct: 11 LTSLTAAELADKIHAREVTSREVTQAFLDRIAETNPELNSFLHVGQVEALAAADAVDKAL 70 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ A L G+P+ +KD T T A S +L+G+ Y++TVT++L + G +LGK Sbjct: 71 DAGEKPASALAGVPLALKDLLVTTDAPTTAASKMLEGYMSPYDATVTKRLREAGIPILGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSSNE S +GPV +P+ + + TPGGS GG++AA+A IGTDTG Sbjct: 131 TNLDEFAMGSSNENSAFGPVHNPYDT-----ERTPGGSGGGTAAALASGQAPLGIGTDTG 185 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG+D Sbjct: 186 GSIRQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPCGRTVLDTALLHEVIAGHDAF 245 Query: 242 DATCVNLPV-PDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT V+ PV P E A + + + G+ VG+ K++ D + + + + L++ GA Sbjct: 246 DATSVDKPVAPVVEAAREGANGDLSGVKVGLIKQFERDGWQDGVMENYHAAVEQLREQGA 305 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 +IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D ++ +R+ Sbjct: 306 EIVEVDCPHFDEALAAYYLIMPCEVSSNLARFDGMRYGLRA-GDDGSHSAEQVMSQSRAE 364 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LS YD++YL+A+++RTL+ +DF AFEQ VDV+++PTTPT+A Sbjct: 365 GFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLVAQDFARAFEQ-VDVLVSPTTPTTA 423 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 F LG++ + +M YN D+ T+ +N+AGL +SVP+ + + +P GLQ++ F+++ Sbjct: 424 FKLGEKAEDPMAM---YNFDLCTLPLNLAGLCGMSVPSGMAADTNLPTGLQIMAPAFQDD 480 Query: 472 TLFSVGQIIEKE 483 L+ VG E + Sbjct: 481 RLYKVGAAYEAK 492 >gi|169794871|ref|YP_001712664.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii AYE] gi|184159354|ref|YP_001847693.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii ACICU] gi|215482419|ref|YP_002324601.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Acinetobacter baumannii AB307-0294] gi|301511195|ref|ZP_07236432.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii AB058] gi|332874205|ref|ZP_08442127.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Acinetobacter baumannii 6014059] gi|226709584|sp|B7GXC5|GATA_ACIB3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485756|sp|B2HY00|GATA_ACIBC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485758|sp|B0VEN3|GATA_ACIBY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169147798|emb|CAM85661.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter baumannii AYE] gi|183210948|gb|ACC58346.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter baumannii ACICU] gi|213988259|gb|ACJ58558.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Acinetobacter baumannii AB307-0294] gi|322509266|gb|ADX04720.1| gatA [Acinetobacter baumannii 1656-2] gi|323519294|gb|ADX93675.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii TCDC-AB0715] gi|332737564|gb|EGJ68469.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Acinetobacter baumannii 6014059] Length = 492 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 220/479 (45%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + Q+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAA 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|229817086|ref|ZP_04447368.1| hypothetical protein BIFANG_02342 [Bifidobacterium angulatum DSM 20098] gi|229784875|gb|EEP20989.1| hypothetical protein BIFANG_02342 [Bifidobacterium angulatum DSM 20098] Length = 512 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/485 (44%), Positives = 310/485 (63%), Gaps = 19/485 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +++L ++ +E ++ ++S+ ELVD+++ IE + + A+++V A +AR A+ D Sbjct: 4 VADLVKLSAAEMGAAIKKGEVSSRELVDAHLDVIEAAEPSVQAFLKVSADEAREQADAFD 63 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G + Sbjct: 64 AKSAEEKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWIPPYDATVIEKLKAAGMPI 123 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFA GSS E S Y +PW TD+ PGGS GGS++AVA F ++GT Sbjct: 124 LGKTNLDEFAQGSSTEHSAYKTTHNPW----DTDR-VPGGSGGGSASAVAAFEAPLALGT 178 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G +RTV DSA+L + I G+ Sbjct: 179 DTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDSALLQEIIGGH 238 Query: 239 DECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+ D+T + P P A + + ++G+ VG+ KE D P ++ + +G+ L++ Sbjct: 239 DKRDSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGDGFQPGVEARFNEGVKKLEE 298 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-----EMYEN 349 GA++ E+SLPH Y+L AYYII P+E SSNLARYDG+RYGLRV D + M Sbjct: 299 MGAEVTEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPDNVPQTAANMMAY 358 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE+ VDV++ PT+ Sbjct: 359 TREAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEK-VDVLVGPTS 417 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P +AF G++ + +M I D+ T+ N+AG+PA+S+PA L + +P+G Q I R Sbjct: 418 PVTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQR 475 Query: 470 EETLF 474 +E ++ Sbjct: 476 DEVMY 480 >gi|311898482|dbj|BAJ30890.1| putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Kitasatospora setae KM-6054] Length = 497 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/469 (45%), Positives = 307/469 (65%), Gaps = 16/469 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARDLEGIPIGI 78 +++AVE+ +++ I+ + ++NA++ V + AA KR + L G+P+ + Sbjct: 20 EVTAVEVAQAHLDRIDAVDKKVNAFLHVDHEGALAAARAVDAKRASGAELGPLAGVPLAL 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F TKG+ T S IL+G+ P Y++T+T++L D V+LGK NMDEFAMGSS E S Y Sbjct: 80 KDVFTTKGMPTTCGSKILEGWVPPYDATLTKRLKDADVVILGKTNMDEFAMGSSTENSAY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW PGGS GGS+AA+A F +IGTDTGGSIRQP + TGTVG+KP Sbjct: 140 GPTGNPWDL-----GRIPGGSGGGSAAALAAFEAPLAIGTDTGGSIRQPGAVTGTVGVKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+++F+ SLDQ G RTV D+A+L +AIAG+D D+T ++ PVPD A Sbjct: 195 TYGSVSRYGLVAFSSSLDQGGPCARTVLDTALLHEAIAGHDPLDSTSIDAPVPDVVAAAR 254 Query: 259 -QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++GM +G+ KE+ + + + +++ + L++ GA++VE+S P A+PAYY+I Sbjct: 255 MRDVRGMRIGVVKEFAGEGYQAGVMQRFEESVELLRELGAEVVEVSCPSFTLAMPAYYLI 314 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVKHRIMIGTYVLSSR 373 +P+EASSNLAR+D +RYGLRV G D E TR GFG EVK RI++GTY LSS Sbjct: 315 APSEASSNLARFDAMRYGLRV-GDDGTRSAEQVTALTREAGFGAEVKRRIILGTYALSSG 373 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y A+K+RTLI RDF AF GVDV+++PTTPT+AFPLG+ ++ +M D+ Sbjct: 374 YYDAYYGSAQKVRTLISRDFDAAF-AGVDVLVSPTTPTTAFPLGERTDDPLAM--YLADL 430 Query: 434 FTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+ N+AG A+S+P L E +P+GLQ+I ++ L+ VG +E Sbjct: 431 CTIPSNLAGNAAMSLPCGLAPEDNLPVGLQIIAPAMADDRLYRVGGAVE 479 >gi|328753375|gb|EGF66991.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL020PA1] Length = 501 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 307/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGARIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNL+RYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLSRYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|327330353|gb|EGE72102.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Propionibacterium acnes HL097PA1] Length = 501 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/488 (44%), Positives = 307/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLARISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQIDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERIADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|291455971|ref|ZP_06595361.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium breve DSM 20213] gi|291382380|gb|EFE89898.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium breve DSM 20213] Length = 513 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/479 (44%), Positives = 305/479 (63%), Gaps = 19/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E ++ D+++ ELV+++++ IE + + A+++V A A+ D + Sbjct: 11 LSAAEQAAAIKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAED 70 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +LGK N+ Sbjct: 71 KAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNL 130 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTDTGGSI Sbjct: 131 DEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTDTGGSI 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D+ D+T Sbjct: 186 RQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRDST 245 Query: 245 CV-NLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P P A + + ++GM VG+ KE D P ++ + + + LK+ GA++V Sbjct: 246 SIPEGPRPMVAAAREGAKRDLKGMKVGLIKELGGDGFQPGVEARFNEAVDKLKEMGAEVV 305 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGF 355 E+S PH Y+L AYYII P+E SSNLARYDG+RYGLRV + M TR GF Sbjct: 306 EVSCPHIGYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYTREAGF 365 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFEQ VDV+++PT+P++AF Sbjct: 366 GDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFKKAFEQ-VDVLISPTSPSTAFK 424 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G++ N+ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+E ++ Sbjct: 425 FGEKMNDPLAM--YVNDIATIPANLAGMPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY 481 >gi|312868314|ref|ZP_07728514.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus parasanguinis F0405] gi|311096059|gb|EFQ54303.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus parasanguinis F0405] Length = 488 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNHKTIEELHALLVSKEISATELTQATLDDIKAREEAVNAFVTVAEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ + L GIP+ +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDAENL-LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYGP + W PGGSS GS+A+VA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGPTKNAWDHSK-----VPGGSSSGSAASVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|309799762|ref|ZP_07693975.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus infantis SK1302] gi|308116611|gb|EFO54074.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus infantis SK1302] Length = 488 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 295/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + + I+ +NA++ + +A A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLDDIKAREEAINAFVTIAEDQALAQAKAIDESG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVVNAKSKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|282861260|ref|ZP_06270325.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces sp. ACTE] gi|282563918|gb|EFB69455.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces sp. ACTE] Length = 500 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/488 (44%), Positives = 315/488 (64%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S + + ++ +++ S +++AVE+ ++++ I+ + +++A++ + + A A A D Sbjct: 4 ISTIIKLTAAQIAEKIASGELTAVEVTEAHLARIDAVDEKVHAFLHIDREGALAQARAVD 63 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR L G+P+ +KD F TK + T S IL+G+ P Y++T+T KL V+L Sbjct: 64 AKREAGEKLGPLAGVPLALKDIFTTKDMPTTVGSKILEGWVPPYDATLTTKLKAADVVIL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D T PGGS GGSSAA+A F +IGTD Sbjct: 124 GKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSSAALASFEAPLAIGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L +AI G+D Sbjct: 179 TGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIGGHD 238 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T ++ PVP E A + S+ GM VG+ K++ + + + + + + LK GA Sbjct: 239 PMDSTSIDAPVPPVVEAARNGSVTGMRVGVVKQFSGEGYQAGVVQRFNESVELLKSLGAT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIG 354 +VE+ P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR G Sbjct: 299 VVELDCPSFDLALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEDVTALTREAG 357 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK R+++GTY LSS YD++Y A+K+RTLI +DF +AFEQ VDVI++PTTPT+AF Sbjct: 358 FGDEVKRRVILGTYALSSGYYDAYYGSAQKVRTLITQDFEKAFEQ-VDVIVSPTTPTTAF 416 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 P+G+ ++ M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ L Sbjct: 417 PIGERADD--PMAMYLADLCTIPTNLAGNSAMSLPCGLAPEDGLPVGLQIIAPAMKDDRL 474 Query: 474 FSVGQIIE 481 + VG +E Sbjct: 475 YKVGAAVE 482 >gi|124486688|ref|NP_001074523.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Mus musculus] gi|81881109|sp|Q9CZN8|QRSL1_MOUSE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|12849037|dbj|BAB28181.1| unnamed protein product [Mus musculus] gi|148673078|gb|EDL05025.1| mCG12257, isoform CRA_a [Mus musculus] Length = 525 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/489 (43%), Positives = 302/489 (61%), Gaps = 23/489 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ ++ EL + + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGQVTPTELCKNCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTTGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW--------RSM----DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +GPV +PW RS D + GGSSGGS+AAVA F C A++G+DTGG Sbjct: 132 DGVFGPVRNPWTYSKQYRERSRQDAGDDSHWLITGGSSGGSAAAVAAFTCFAALGSDTGG 191 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D D Sbjct: 192 STRNPAAHCGIVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDTAIVLGTLAGHDPKD 251 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V P + + +GIPKEY + LS + W Q + GAK++E+ Sbjct: 252 STTVRNPAQPASVPGGMDVSRLCIGIPKEYLVPELSSEVRSLWSQAADLFESEGAKVIEV 311 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVK 360 SLPHT Y++ Y+++ +E +SN+AR+DG++YG R G D+ MY TR GF V+ Sbjct: 312 SLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHR-SGVDVSTEAMYAATRQEGFNDVVR 370 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LG 417 RI+ G + L Y++++++A+K+R LI +DF + FE GVDV+LTPTT T A P Sbjct: 371 GRILSGNFFLLKENYENYFVKAQKVRRLIVKDFVDVFESGVDVLLTPTTLTEAVPYLEFI 430 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 KE+N + S +D+FT AVNMAGLPA+SVP AL + +P+GLQLIG+ F ++ L +V Sbjct: 431 KEDNRTRSA---QDDIFTQAVNMAGLPAVSVPVALSNQGLPIGLQLIGRAFCDQQLLTVA 487 Query: 478 QIIEKEAGY 486 + EK+ + Sbjct: 488 KWFEKQVQF 496 >gi|47125496|gb|AAH70459.1| Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Mus musculus] Length = 525 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/489 (43%), Positives = 302/489 (61%), Gaps = 23/489 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ ++ EL + + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGQVTPTELCKNCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTTGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW--------RSM----DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +GPV +PW RS D + GGSSGGS+AAVA F C A++G+DTGG Sbjct: 132 DGVFGPVRNPWTYSKQYRERSRQDAGDDSHWLITGGSSGGSAAAVAAFTCFAALGSDTGG 191 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D D Sbjct: 192 STRNPAAHCGIVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDTAIVLGTLAGHDPKD 251 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V P + + +GIPKEY + LS + W Q + GAK++E+ Sbjct: 252 STTVRNPAQPASVPGGMDVSRLCIGIPKEYLVPELSSEVRSLWSQAADLFESEGAKVIEV 311 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVK 360 SLPHT Y++ Y+++ +E +SN+AR+DG++YG R G D+ MY TR GF V+ Sbjct: 312 SLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHR-SGVDVSTEAMYAATRQEGFNDVVR 370 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LG 417 RI+ G + L Y++++++A+K+R LI +DF + FE GVDV+LTPTT T A P Sbjct: 371 GRILSGNFFLLKENYENYFVKAQKVRRLIVKDFVDVFESGVDVLLTPTTLTEAVPYLEFI 430 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 KE+N + S +D+FT AVNMAGLPA+SVP AL + +P+GLQLIG+ F ++ L +V Sbjct: 431 KEDNRTRSA---QDDIFTQAVNMAGLPAVSVPVALSNQGLPIGLQLIGRAFCDQQLLTVA 487 Query: 478 QIIEKEAGY 486 + EK+ + Sbjct: 488 KWFEKQVQF 496 >gi|288906062|ref|YP_003431284.1| aspartyl-/glutamyl-tRNA amidotransferase, subunit A [Streptococcus gallolyticus UCN34] gi|288732788|emb|CBI14364.1| Putative aspartyl-/glutamyl-tRNA amidotransferase, subunit A [Streptococcus gallolyticus UCN34] Length = 488 Score = 368 bits (945), Expect = e-99, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 305/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N ++ E + L +K+ISAVEL + ++ I+ + ++++I V + A A A D++ Sbjct: 3 FNTKSIDELHNLLVNKEISAVELTKATLEDIKEREAAVDSFITVSEEAALAQAAAVDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +T+GI T A S +L + P +++T +KL+ +++GK N Sbjct: 63 IDAD-NVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSY+ + W PGGSSGGS+AAVA ++G+DTGGS Sbjct: 122 MDEFAMGGSTETSYFKKTKNAWDHSK-----VPGGSSGGSAAAVASGQVRLALGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYGR SR G+I+F SLDQ G ++TV+++A LL IAG+D D Sbjct: 177 IRQPAAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAGHDTKDV 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + + GA + E+S Sbjct: 237 TSSDREVADFTAKIGQDIKGMKIALPKEYLGEGIDPEVKETILKAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E + LE +Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYNNLEDIYVNTRSEGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI RDF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+G+QLIG + EET++ E Sbjct: 414 HDPVAMYLADILTIPVNLAGLPGISIPAGFAQ-GLPVGMQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|237650350|ref|ZP_04524602.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae CCRI 1974] gi|237822038|ref|ZP_04597883.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae CCRI 1974M2] Length = 488 Score = 368 bits (945), Expect = e-99, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 300/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T Q + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETIQSAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|71905760|ref|YP_283347.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Dechloromonas aromatica RCB] gi|109829683|sp|Q47JV4|GATA_DECAR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|71845381|gb|AAZ44877.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Dechloromonas aromatica RCB] Length = 485 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 218/465 (46%), Positives = 304/465 (65%), Gaps = 11/465 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K +S+VEL ++ IE N +NA++ V +K+ A ++D RI G A L GIP Sbjct: 13 LAAKKVSSVELSSLFLDRIERLNPTLNAFVTVDREKSLQMARDADARIAAGTAGPLTGIP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW-DNGAVMLGKLNMDEFAMGSSNE 134 I KD F +G + S +L F Y++TV +K+ + G V LGK NMDEFAMGSSNE Sbjct: 73 IAQKDIFCAEGWLSTCGSKMLANFVSPYDATVIRKMHAEAGLVSLGKTNMDEFAMGSSNE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS++G V +PW + + PGGSSGGS+AAVA L A+ GTDTGGSIRQPA+ Sbjct: 133 TSFFGSVRNPWDT-----QRVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALCNLT 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G+I+FA SLDQ G + + D A+LL + G+DE D+T + PV DY Sbjct: 188 GLKPTYGVVSRYGMIAFASSLDQGGPMAASAEDCALLLNTMVGFDERDSTSLERPVEDYA 247 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R LD+ + G+ +G+PKE+ + + + I+ + GA VEISLP++ ++PAY Sbjct: 248 RDLDKPLDGLRIGLPKEFFGEGCDAEVMAAVRAAIAEYEKLGATCVEISLPNSHLSVPAY 307 Query: 315 YIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+PAEASSNL+R+DGVRYG R E ++ +MY TR+ GFG EVK RI+IG YVLS Sbjct: 308 YVIAPAEASSNLSRFDGVRYGYRAPEYGNLDDMYMKTRAQGFGAEVKRRILIGAYVLSHG 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A++IR LI DF EAF+ DVI++PT+P++AF LG++ + M +D+ Sbjct: 368 YYDAYYLQAQRIRRLIANDFVEAFKH-CDVIMSPTSPSTAFKLGEKAADPVQM--YLSDI 424 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +T+AVN+AGLP +S+P +P+GLQLIG F E L +V Sbjct: 425 YTIAVNLAGLPGMSIPCGFV-GGLPVGLQLIGNYFAENRLLNVAH 468 >gi|315103668|gb|EFT75644.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL050PA2] Length = 501 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 213/488 (43%), Positives = 309/488 (63%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ +S+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQVSSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARCID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSRMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQADVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDIL-EMYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ ++ TR +G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAGQVMRATRGVGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGGPAGSFPIGLSETDGMPVGMQVMAPLMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|148988188|ref|ZP_01819651.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP6-BS73] gi|147926652|gb|EDK77725.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP6-BS73] Length = 488 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 300/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNDKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 GY + Sbjct: 473 TTGYHK 478 >gi|74212991|dbj|BAE41646.1| unnamed protein product [Mus musculus] Length = 525 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 211/489 (43%), Positives = 302/489 (61%), Gaps = 23/489 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ ++ EL + + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGQVTPTELCKNCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTTGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW--------RSM----DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +GPV +PW RS D + GGSSGGS+AAVA F C A++G+DTGG Sbjct: 132 DGVFGPVRNPWTYSKQYRERSRQDAGDDSHWLITGGSSGGSAAAVAAFTCFAALGSDTGG 191 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D D Sbjct: 192 STRNPAAHCGIVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDTAIVLGTLAGHDPKD 251 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V P + + +GIPKEY + LS + W Q + GAK++E+ Sbjct: 252 STTVRNPAQPASVPGGMDVSRLCIGIPKEYLVPELSSEVRSLWSQAADLFESEGAKVIEV 311 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVK 360 SLPHT Y++ Y+++ +E +SN+AR+DG++YG R G D+ MY TR GF V+ Sbjct: 312 SLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHR-SGVDVSTEAMYAATRQEGFNGVVR 370 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LG 417 RI+ G + L Y++++++A+K+R LI +DF + FE GVDV+LTPTT T A P Sbjct: 371 GRILSGNFFLLKENYENYFVKAQKVRRLIVKDFVDVFESGVDVLLTPTTLTEAVPYLEFI 430 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 KE+N + S +D+FT AVNMAGLPA+SVP AL + +P+GLQLIG+ F ++ L +V Sbjct: 431 KEDNRTRSA---QDDIFTQAVNMAGLPAVSVPVALSNQGLPIGLQLIGRAFCDQQLLTVA 487 Query: 478 QIIEKEAGY 486 + EK+ + Sbjct: 488 KWFEKQVQF 496 >gi|224048359|ref|XP_002195925.1| PREDICTED: glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Taeniopygia guttata] Length = 524 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 205/491 (41%), Positives = 291/491 (59%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L+ ++ EL + I+ + +NAYI V + A AEES+KR G L+GI Sbjct: 13 LKDGRVTPTELCQRCLALIKTTKF-LNAYITVAEETALKQAEESEKRYKRGQPLGILDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F T GI T S++L G+ Y +TV QKL D GAV+LGK N+DEFAMGS + Sbjct: 72 PIAVKDNFNTAGIETTCASNMLKGYISPYNATVVQKLLDQGAVLLGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPWR-SMDSTDKFTPGGSSGGSSA--------------AVAGFLCAASIGTD 179 +GPV +PW S DK P S + AV+ F C A++G+D Sbjct: 132 DGVFGPVRNPWSYSKQYKDKSVPKSHSEDEESNWVITGGSSGGSAAAVSSFTCFAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KPTYG SR G+I S+D GI+TR V D+A+LL ++AG+D Sbjct: 192 TGGSTRNPAAHCGVVGLKPTYGLISRHGLIPLVNSMDVPGILTRCVDDAAVLLGSLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + +E +++GIPKEY LS I W + K+AGAK+ Sbjct: 252 PKDSTTIQDDFKPFEIPNLTDFSKLSIGIPKEYHAPGLSSEILALWSKAADLFKNAGAKV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 VE+SLPHT+Y++ Y+++ AE +SN+AR+DG+ YG R + KD E MY TR GF Sbjct: 312 VEVSLPHTRYSIVCYHVLCTAEVASNMARFDGLEYGHRSDMKDSTESMYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA---FP 415 V+ RI+ G Y L + Y+ ++++A+K+R LI DF + F GVD++LTPTT + A Sbjct: 372 VRGRILSGNYFLLKQNYEKYFVKAQKVRRLIANDFVKVFRSGVDILLTPTTLSDAALYTE 431 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +E+N + S +D+ T A NMAGLPAI+VP AL E+ +P+GLQ IG+ F+E+ L + Sbjct: 432 FIQEDNRTRSA---QDDILTQAANMAGLPAINVPTALSERGLPVGLQFIGRSFQEKQLLT 488 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 489 VAKWFEKQVQF 499 >gi|55821602|ref|YP_140044.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus thermophilus LMG 18311] gi|55823530|ref|YP_141971.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus thermophilus CNRZ1066] gi|81559031|sp|Q5LYE9|GATA_STRT1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|81560225|sp|Q5M312|GATA_STRT2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|55737587|gb|AAV61229.1| glutamyl-tRNA Gln amidotransferase subunit A [Streptococcus thermophilus LMG 18311] gi|55739515|gb|AAV63156.1| glutamyl-tRNA Gln amidotransferase subunit A [Streptococcus thermophilus CNRZ1066] Length = 488 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 208/486 (42%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + I I+ +NA++ V + A A A+ D++ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATIDDIKAREEAVNAFVTVAEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-LSGIPFAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILDAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|225164184|ref|ZP_03726460.1| Amidase [Opitutaceae bacterium TAV2] gi|224801193|gb|EEG19513.1| Amidase [Opitutaceae bacterium TAV2] Length = 492 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 228/497 (45%), Positives = 303/497 (60%), Gaps = 24/497 (4%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++ L +K IS+VEL + I ++NA+ A A A SD R + Sbjct: 3 FKTITALSAALAAKQISSVELTQAVIDRTNAVEPKVNAFNSTDPSDALAQAAASDARRAS 62 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G AR L+GIPI IKD A K A S IL + Y++TV QKL GAV+ G+LN+ Sbjct: 63 GHARGPLDGIPIAIKDVIAVKDQPLTASSKILANYISPYDATVIQKLRHAGAVIWGRLNL 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DE AMGSS E S + +P+ ++D PGGSSGGS+AAVA A++G+DTGGSI Sbjct: 123 DELAMGSSTENSAFKTTSNPY-NLDCV----PGGSSGGSAAAVAAGEAIATLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+ VG+KPTYG SR G+ +FA SLDQ G RTV D+AILL+ IAG+D D+T Sbjct: 178 RQPAALCNVVGMKPTYGLVSRYGLAAFASSLDQIGPFARTVEDAAILLQTIAGHDPHDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTV--------GIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 + +PDY AL V GIPKEY D L P + +Q I+ K G Sbjct: 238 SCQVAIPDYRAALHAKHNFHAVPPPPPRRLGIPKEYFGDGLDPEVGAAVEQAIAHYKKLG 297 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGF 355 +I ++SLPHT++ L YYIIS AE SSNLAR DG+RYG R D +++Y TR+ GF Sbjct: 298 YEIRDVSLPHTEHCLSVYYIISTAECSSNLARLDGIRYGYRSPNATDAVDIYSKTRAEGF 357 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK R+++GTYVLSS YD++YLRA+K+RTLI++DF +AFEQ VD I+TPT+PT AF Sbjct: 358 GPEVKRRVILGTYVLSSGFYDAYYLRAQKVRTLIRQDFQKAFEQ-VDAIVTPTSPTPAFR 416 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G+ N M +D++T+ N+AG+P IS+P + +P+GLQL+GQP +E LF+ Sbjct: 417 KGERSEN--LMAMYLSDIYTIGANLAGIPGISIPCGFSKAGLPIGLQLLGQPLKETDLFT 474 Query: 476 VGQIIEKEAGYFRPHKW 492 + Y H W Sbjct: 475 IAH------DYDAAHDW 485 >gi|314923319|gb|EFS87150.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL001PA1] gi|314966667|gb|EFT10766.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL082PA2] gi|314981396|gb|EFT25490.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL110PA3] gi|315092062|gb|EFT64038.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL110PA4] gi|315092811|gb|EFT64787.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL060PA1] gi|327327492|gb|EGE69268.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Propionibacterium acnes HL103PA1] Length = 501 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 213/488 (43%), Positives = 309/488 (63%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ +S+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQVSSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARCID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSRMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQADVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDIL-EMYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ ++ TR +G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAGQVMRATRGVGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGGPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|307710567|ref|ZP_07647002.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus mitis SK564] gi|307618675|gb|EFN97816.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus mitis SK564] Length = 488 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 206/486 (42%), Positives = 301/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ + +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSRETAINAFVTIAEEQAIAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T + G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKEKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W D T PGGSS GS++AVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAW---DQTK--VPGGSSSGSASAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFENVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|134297283|ref|YP_001121018.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia vietnamiensis G4] gi|166217654|sp|A4JIT0|GATA_BURVG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|134140440|gb|ABO56183.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia vietnamiensis G4] Length = 496 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 216/499 (43%), Positives = 312/499 (62%), Gaps = 23/499 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + Sbjct: 1 MHAKSLTELRAALAAKECSAVELAQLYLKRIDAAR-DLNAFVHVDADLTLAQAKAADAEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI KD F T+G + A S +L+ ++ +++TV +L G V LGK N Sbjct: 60 ARGAGGPLTGVPIAHKDVFVTRGWRSTAGSKMLENYQSPFDATVVARLQAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGAVKNPWDT-----HAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + D+ R L Q + G+ +G+P EY L+ + T + + Sbjct: 235 TSLERDDEDFTRHLGQPWTAGSDAARPLAGLRIGLPNEYFGAGLADDVRATIDAALKQYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ LG + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFN 471 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + V ++ + + Sbjct: 472 EARMLQVADAFQRATDWHK 490 >gi|282853924|ref|ZP_06263261.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes J139] gi|282583377|gb|EFB88757.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes J139] Length = 501 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 212/488 (43%), Positives = 306/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ +S+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQVSSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARCID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSRMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVFDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQADVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV ++ TR +G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAGQVMRATRGVGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGGPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|121608581|ref|YP_996388.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Verminephrobacter eiseniae EF01-2] gi|121553221|gb|ABM57370.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Verminephrobacter eiseniae EF01-2] Length = 500 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 218/492 (44%), Positives = 307/492 (62%), Gaps = 21/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+ + V+E LR + + AVE+ ++ A + + AY+ + + A A +D Sbjct: 7 AALHDLGVAELATALRQRRVCAVEVARHFL-ARAKARHDLGAYVALNEELTLAQARAADA 65 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 RI G A LEG+P+ KD F T+G+ + A S +L G++ +++TV ++L GAV LGK Sbjct: 66 RIAAGSAAPLEGVPLAHKDIFVTRGLPSSAGSKMLAGYQSPFDATVVRQLAQAGAVTLGK 125 Query: 122 LNMDEFAMGSSNETSYYGP--------VISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLC 172 LN DEFAMGSSNE S P V +PW RS PGGSSGGS+ AVA L Sbjct: 126 LNCDEFAMGSSNENSAVAPWGHPGPAPVRNPWDRSR------IPGGSSGGSAVAVAARLA 179 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A+ GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ +D A+LL Sbjct: 180 PAATGTDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMARSAQDCALLL 239 Query: 233 KAIAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 A+ G D + D+T ++ P D+ RAL++ I G+ +G+P E+ L+ + + Sbjct: 240 SAMCGPDPDRDSTSLDRPAEDFSRALNEPIAGLRIGLPAEFFGAGLAADVRAAVDAALGE 299 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENT 350 + GA++V ISLP T+ ++P YYII+PAEASSNL+R+DGV++G R D+ +MY T Sbjct: 300 YEKLGARLVPISLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRARDYTDLADMYCKT 359 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RIMIGTYVLS YD++YL+A+KIR +I DF AF D+I P P Sbjct: 360 RAEGFGAEVKRRIMIGTYVLSHGYYDAYYLQAQKIRRMIVDDFQNAFRH-CDLIAGPVAP 418 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + A+ LG+ N+ + + D+FT+ ++AGLP +S+PA MP+GLQLIG F E Sbjct: 419 SVAWKLGEHGND--PLANYLADIFTLPASLAGLPCMSLPAGFGAAGMPVGLQLIGNYFGE 476 Query: 471 ETLFSVGQIIEK 482 L + +++ Sbjct: 477 AGLLNAAHRLQQ 488 >gi|317498682|ref|ZP_07956974.1| amidase [Lachnospiraceae bacterium 5_1_63FAA] gi|316894024|gb|EFV16214.1| amidase [Lachnospiraceae bacterium 5_1_63FAA] Length = 490 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 218/491 (44%), Positives = 301/491 (61%), Gaps = 11/491 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L AV E +++ K+I+ VE + ++ I+ S ++ Y+ + A AEE Sbjct: 1 MSILELTAV-ELGKKIKDKEITVVEATKAALEQIKAVESDVHGYVSYDEESALKRAEEVQ 59 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I +G L G+P+ IKD TKG T S IL+ F P Y + + L G V L Sbjct: 60 KGIDDGTYTGPLAGVPMAIKDNICTKGYTTTCSSKILENFVPTYSAQAVENLIKEGVVFL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS YG +PW + PGGSSGGS+AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAYGVTKNPWDL-----EKVPGGSSGGSAAAVAANECFMALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS+ G GIKPTYG SR G+I++ SLDQ G + + V D A LL+AIA +D Sbjct: 175 TGGSIRQPASYCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPLAKDVTDCATLLEAIASHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E D+T V L D+ AL ++GM +GIPK+Y + L + + L++ GA + Sbjct: 235 EKDSTSVRLESYDFTSALKDDVKGMKIGIPKDYFGEGLDEEVKEAVLAAAKTLEEKGAIV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E L +YA+PAYY+I+ AEASSNL+R+DGV+YG R + + L MY+ TRS GFG E Sbjct: 295 EEFDLGLVEYAIPAYYVIAAAEASSNLSRFDGVKYGYRAKDYEGLHNMYKKTRSEGFGAE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK++F +AFE+ DVIL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKKEFDKAFEK-YDVILGPVAPTTAPKLG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ S + D++T++VN+AGLP IS+P + MP+GLQLIG F E+ + Sbjct: 413 -DSLSDPIKMYLGDIYTISVNLAGLPGISLPCGKDKNGMPIGLQLIGDCFNEKKIIQAAY 471 Query: 479 IIEKEAGYFRP 489 E+ Y P Sbjct: 472 TFEQTRAYEAP 482 >gi|302537081|ref|ZP_07289423.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces sp. C] gi|302445976|gb|EFL17792.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces sp. C] Length = 499 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 218/489 (44%), Positives = 326/489 (66%), Gaps = 16/489 (3%) Query: 1 MSELNF--MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE 58 M++ N + +++ +++ S +++AVE+ ++++ IE ++ ++NA++ V + A A A Sbjct: 1 MADTNIIKLTAAQTAEKIASGELTAVEVTEAHLARIEATDEKVNAFLYVDREGALAQAAA 60 Query: 59 SDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D + G+ L G+P+ +KD F T G+ T S IL+G+ P Y++T+T+KL + G V Sbjct: 61 VDAKRAAGEKLGPLAGVPLALKDIFTTVGVPTTVGSKILEGWIPPYDATLTRKLKEAGVV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK NMDEFAMGSS E S YGP +PW D T PGGS GGS+AA+A F +IG Sbjct: 121 IIGKTNMDEFAMGSSTENSAYGPTGNPW---DLTR--IPGGSGGGSAAALAAFQAPLAIG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPA+ TGTVG+KPTYG SR G+++F+ SLDQ G RTV D+A+L + IAG Sbjct: 176 TDTGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAG 235 Query: 238 YDECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 +D D+T ++ PVP E A + S+ GM VG+ K++ + + + + + + LK+ G Sbjct: 236 HDPLDSTSIDAPVPPVVEAARNGSVAGMRVGVVKQFAGEGYQAGVVQRFNESVELLKELG 295 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSI 353 A+IVE+ P A+ AYY+I+P+EASSNLAR+D +RYGLRV +G K E+ TR Sbjct: 296 AEIVELDCPSFDLAMAAYYLIAPSEASSNLARFDAMRYGLRVGDDGTKSAEEVTALTREA 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GTY LSS YD++Y A+K+RTLI +DF ++FEQ VDVI++PTTPT+A Sbjct: 356 GFGDEVKRRIILGTYALSSGYYDAYYGSAQKVRTLITKDFEKSFEQ-VDVIVSPTTPTTA 414 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F +G+ ++ +M D+ T+ N+AG A+S+P L E +P+GLQ+I +++ Sbjct: 415 FAIGERTDDPLAM--YLADLCTIPTNLAGNSAMSLPCGLAPEDGLPVGLQIIAPAMKDDR 472 Query: 473 LFSVGQIIE 481 L+ VG +E Sbjct: 473 LYKVGAAVE 481 >gi|228477205|ref|ZP_04061843.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus salivarius SK126] gi|228251224|gb|EEK10395.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus salivarius SK126] Length = 488 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 209/486 (43%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L SK+ISA EL + + I+ +NA++ V + A A A+ D++ Sbjct: 3 FNNKTIEELHDLLVSKEISATELTQATLDDIKAREEVVNAFVTVAEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G + TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSPTVKENAQLLNIIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + V D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|213157802|ref|YP_002320600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acinetobacter baumannii AB0057] gi|301344937|ref|ZP_07225678.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii AB056] gi|301594361|ref|ZP_07239369.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii AB059] gi|226709585|sp|B7I7N2|GATA_ACIB5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|213056962|gb|ACJ41864.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acinetobacter baumannii AB0057] Length = 492 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 219/479 (45%), Positives = 315/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + Q+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V + DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKELDDYVANLNNTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAA 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|160936243|ref|ZP_02083616.1| hypothetical protein CLOBOL_01139 [Clostridium bolteae ATCC BAA-613] gi|158441053|gb|EDP18777.1| hypothetical protein CLOBOL_01139 [Clostridium bolteae ATCC BAA-613] Length = 506 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 202/478 (42%), Positives = 288/478 (60%), Gaps = 10/478 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E R++S DI+AV+ ++ + I+ ++A++ V +K A + I G Sbjct: 6 MTALELGRRIQSGDITAVQAAEASLARIKAMEPSVHAFVTVNEEKTMEQAGKVQADIEAG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ IKD TKG+ T S IL F P Y + L GAV+LGK NMD Sbjct: 66 RLKGPLAGVPVAIKDNMCTKGMRTTCSSRILGNFIPTYTAQAVSNLEQAGAVILGKTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ ETS +G +PW + PGGSSGGS AAVA C ++G+DTGGSIR Sbjct: 126 EFAMGSTTETSAFGVTRNPWNL-----EHVPGGSSGGSCAAVAAGECFYALGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QP+SF G GIKPTYG SR G+I++ SLDQ G + + V D A +L+ +A +D D+T Sbjct: 181 QPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVSDCAAVLEVLASHDPKDSTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + D+ AL + ++GM +GIP+ Y L + + L + GA + L Sbjct: 241 MERRDCDFTSALSEDVRGMRIGIPESYFGQGLDQEVKDAVLEAARVLGEKGAIVETFDLK 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +YA+PAYY+I+ AEASSNL+R+DGV+YG R E + + MY+ +RS+GFG EVK RIM Sbjct: 301 LAEYAIPAYYVIASAEASSNLSRFDGVKYGYRAPEYEGLHSMYKKSRSLGFGPEVKRRIM 360 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G++VLSS YD++YL+A + + LIK++F AF DVIL P P++A LG+ + Sbjct: 361 LGSFVLSSGYYDAYYLKALRTKALIKKEFDRAFAS-YDVILAPAAPSTAPRLGQSLGDPL 419 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D++T++VN+AGLP IS+P L K +P+GLQLIG F+E+ + EK Sbjct: 420 KM--YLGDIYTISVNLAGLPGISLPCGLDSKGLPIGLQLIGDCFKEKNIIRAAYAYEK 475 >gi|311065009|ref|YP_003971735.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit A GatA [Bifidobacterium bifidum PRL2010] gi|310867329|gb|ADP36698.1| GatA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bifidobacterium bifidum PRL2010] Length = 514 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 210/484 (43%), Positives = 312/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++ ++S+ ELV++++ I+ + + A+++V A +A A+ D Sbjct: 7 TELVKLSAAEMAAKVKTGEVSSRELVEAHLAVIDAAEPSIKAFLKVSADQALDQADAFDA 66 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 67 KSADDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 126 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTD Sbjct: 127 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTD 181 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D Sbjct: 182 TGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHD 241 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A L + ++G+ VG+ KE D P ++ + + + L++ Sbjct: 242 KRDSTSIPEGPRPMAAAAREGLKRDLKGLKVGLIKELGGDGYQPGVEARFNEAVKKLEEM 301 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA++VE+S PH +Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 302 GAEVVEVSCPHFEYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYT 361 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI +DF AFE+ DV+++PT+P Sbjct: 362 RETGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIQDFHNAFEK-ADVLVSPTSP 420 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++AF G++ N+ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+ Sbjct: 421 STAFKFGEKMNDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRD 478 Query: 471 ETLF 474 E ++ Sbjct: 479 EVMY 482 >gi|315108584|gb|EFT80560.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL030PA2] Length = 501 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 214/488 (43%), Positives = 307/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TK I T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKEIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|330814882|ref|XP_003291458.1| hypothetical protein DICPUDRAFT_39055 [Dictyostelium purpureum] gi|325078346|gb|EGC32002.1| hypothetical protein DICPUDRAFT_39055 [Dictyostelium purpureum] Length = 510 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 204/496 (41%), Positives = 311/496 (62%), Gaps = 20/496 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI-ENSNSQMNAYIEVVA-QKARAAAEE 58 M L + + R+ L + +I +L+ + I ++ + +N ++ V + E Sbjct: 1 MKNLKSTTIKQIRNHLLNGEIKVQDLIKNTFNNINKDGENYLNTFVTVESLDNLEKQINE 60 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 S +R NG + L+G+PI IKD F TKGI T S+IL + P +++TV +KL D GA++ Sbjct: 61 SQERYANGTNKKLDGLPIAIKDNFTTKGIKTTCGSNILSNYIPTFDATVCKKLKDEGAII 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +GK NMDEF MGSS+ SYYG VI+PW + D + + GGSSGGS+AA+A C ++G Sbjct: 121 IGKTNMDEFGMGSSSTNSYYGSVINPWSKKGDQNELYVAGGSSGGSAAAIAAGYCMGALG 180 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGSIR PAS+ G VG KP+YG SR G++++A SLD AG++T D+A LL + G Sbjct: 181 SDTGGSIRLPASYCGVVGYKPSYGIISRYGLVAYASSLDTAGVLTNNCDDAAELLDVLVG 240 Query: 238 YD-ECDATCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 D E D+T ++ + +Y+ L ++I+ + GIP +Y + L P I + WQQ +S + Sbjct: 241 KDTENDSTSISFGKDILKEYKNKLSTKTIKDLVFGIPTDYLVKELDPDILELWQQVVSEI 300 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE------GKDILEM 346 + G K+V + LPHT+YALPAYY+++ +EASSNL+R+DGVRYG R E G + +M Sbjct: 301 ELHGGKVVAVDLPHTRYALPAYYLLATSEASSNLSRFDGVRYGYRHELHSEDVGLGLKDM 360 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVIL 405 Y TR+ GFG+EVK RI++G+ LS YD+ Y +A+KIR L+ DF F Q VDV++ Sbjct: 361 YTKTRTEGFGEEVKKRIILGSMSLSRTQYDNFYTKAQKIRRLVSDDFKSVFGNQKVDVLI 420 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 TP P+ AF ++N H+Y ND+ T+ +++AG+PA+SVP L ++ +P+ +QL+ Sbjct: 421 TPVAPSPAF----KQNQKLDPIHVYINDIMTIPISLAGVPAVSVPLKLSKENLPISVQLV 476 Query: 465 GQPFREETLFSVGQII 480 ++TL ++ Sbjct: 477 SDRLNDDTLLFAANLL 492 >gi|299068368|emb|CBJ39592.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Ralstonia solanacearum CMR15] Length = 495 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 222/482 (46%), Positives = 311/482 (64%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K++SAVEL Y+ IE + + +NA+I V + A A+ +D R+ GDA L GI Sbjct: 12 QLAAKEVSAVELARHYLARIE-ARADLNAFIHVDPEATLAQAQAADARLAAGDAGPLAGI 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +LD + +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLDSYVSPFDATVVERLAAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S++GPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSHFGPVKNPWDVAR-----VPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARDSTSLEPGRGGDA 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L + ++ G+ +G+P+EY L+ + + ++ L+ GA +V+ Sbjct: 246 EDFGRLLGRPLEGADAARPLAGLRIGLPQEYFGAGLADDVRAAVRAALAELETLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY TR+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKTRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF Q DVI+ P PT A+ LG++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQNAFGQ-CDVIMGPVAPTVAWKLGEKT 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPLQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|322377041|ref|ZP_08051533.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. M334] gi|321281754|gb|EFX58762.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. M334] Length = 488 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 206/486 (42%), Positives = 300/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ + +NA+I + ++A A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLEDIKSRETAINAFITIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NILSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAN-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP +S+PA + +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGLSIPAGFSQ-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|224283602|ref|ZP_03646924.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium bifidum NCIMB 41171] gi|313140753|ref|ZP_07802946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium bifidum NCIMB 41171] gi|313133263|gb|EFR50880.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium bifidum NCIMB 41171] Length = 512 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 210/484 (43%), Positives = 312/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++ ++S+ ELV++++ I+ + + A+++V A +A A+ D Sbjct: 5 TELVKLSAAEMAAKVKAGEVSSRELVEAHLAVIDAAEPSIKAFLKVSADQALDQADAFDA 64 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 65 KSADDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 124 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTD Sbjct: 125 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D Sbjct: 180 TGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHD 239 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A L + ++G+ VG+ KE D P ++ + + + L++ Sbjct: 240 KRDSTSIPEGPRPMAAAAREGLKRDLKGLKVGLIKELGGDGYQPGVEARFNEAVKKLEEM 299 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA++VE+S PH +Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 300 GAEVVEVSCPHFEYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYT 359 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI +DF AFE+ DV+++PT+P Sbjct: 360 RETGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIQDFHNAFEK-ADVLVSPTSP 418 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++AF G++ N+ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+ Sbjct: 419 STAFKFGEKMNDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRD 476 Query: 471 ETLF 474 E ++ Sbjct: 477 EVMY 480 >gi|310288136|ref|YP_003939395.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bifidobacterium bifidum S17] gi|309252073|gb|ADO53821.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bifidobacterium bifidum S17] Length = 512 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 210/484 (43%), Positives = 312/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++ ++S+ ELV++++ I+ + + A+++V A +A A+ D Sbjct: 5 TELVKLSAAEMAAKVKTGEVSSRELVEAHLAVIDAAEPSIKAFLKVSADQALDQADAFDA 64 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 65 KSADDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 124 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTD Sbjct: 125 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D Sbjct: 180 TGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHD 239 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A L + ++G+ VG+ KE D P ++ + + + L++ Sbjct: 240 KRDSTSIPEGPRPMAAAAREGLKRDLKGLKVGLIKELGGDGYQPGVEARFNEAVKKLEEM 299 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA++VE+S PH +Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 300 GAEVVEVSCPHFEYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYT 359 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI +DF AFE+ DV+++PT+P Sbjct: 360 RETGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIQDFHNAFEK-ADVLVSPTSP 418 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++AF G++ N+ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+ Sbjct: 419 STAFKFGEKMNDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRD 476 Query: 471 ETLF 474 E ++ Sbjct: 477 EVMY 480 >gi|291166517|gb|EFE28563.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Filifactor alocis ATCC 35896] Length = 485 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 207/487 (42%), Positives = 307/487 (63%), Gaps = 10/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +++ ++ L+ + S EL+ S IE + ++ A+I + + + + K+ Sbjct: 2 DLKNISIQDANCMLKKGECSVSELLTSSYDRIEKIDEEVKAFITLSKDVSEEQSLVAQKK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L GIP +KD +TKG+ T S +L+ + P Y++TV +KL + +M+GK+ Sbjct: 62 FEEKTDTLLTGIPYSVKDNISTKGVKTTCASKMLENYIPIYDATVIEKLNTHMPIMVGKV 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMG S E S + P +P+ TD + PGGSSGGS+ +VA S+G+DTGG Sbjct: 122 NMDEFAMGGSTEKSAFFPTKNPF----DTD-YVPGGSSGGSAVSVASGEVLFSLGSDTGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPAS+ G VG+KPTYGR SR G+++F SLDQ GI+T+ V DSAI+L AI+G D D Sbjct: 177 SVRQPASYCGIVGVKPTYGRISRYGLVAFGSSLDQVGILTKNVADSAIVLNAISGKDSMD 236 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T ++ V +Y LD +I+G+ +GI K+ D + + Q I ++ GA + Sbjct: 237 STSADIQVDEYLNQLDGNIKGLRIGIIKDLFEDGIDVDVKGAVQNAIEKFEELGAICEIV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 L H ++++ YYII+P+EASSNL+R+DGV+YG R E D+ EMY NTRS GFG EVK Sbjct: 297 DLKHIRHSIETYYIIAPSEASSNLSRFDGVKYGYRTENYSDLEEMYINTRSEGFGDEVKR 356 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GT+ LS+ YD++Y +A K+RTLIK+DF AF++ D++L+PT P AF G++ N Sbjct: 357 RILLGTFTLSAGYYDAYYQKALKVRTLIKQDFVNAFKK-YDLLLSPTAPNVAFRCGEKTN 415 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + SM D+ T+ VN+AGLPAIS+P + K+P+GLQLIG F+E T+ E Sbjct: 416 DPLSM--YLEDLCTIPVNLAGLPAISIPCGR-KGKLPIGLQLIGNYFKEGTMLKAADAFE 472 Query: 482 KEAGYFR 488 K Y + Sbjct: 473 KNTDYHK 479 >gi|91200832|emb|CAJ73886.1| strongly similar to glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Kuenenia stuttgartiensis] Length = 486 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 206/488 (42%), Positives = 311/488 (63%), Gaps = 11/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L+F A+ R ++ S++I A ++V+ + I +S + +++ + + A AEE D Sbjct: 1 MKFLSFTALQIKR-KILSEEIRATDIVNMLFERIFKIDSNIQSFLTLDEENAFKKAEEID 59 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K++ N ++ L GIPI +KD TK + T S IL F P Y++ V ++L + ++++ Sbjct: 60 KKVANHESVGLLAGIPIAVKDNICTKDLTTTCASKILKTFIPPYDAFVVKRLKEEDSIII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S Y +P+ F PGGSSGGSSAAV+ L ++G++ Sbjct: 120 GKTNLDEFAMGSSTENSSYKITRNPYNQ-----NFVPGGSSGGSSAAVSADLAFMALGSE 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G VG+KPTYGR SR G+++F+ SLDQ G IT+ V D+A+LL IAG D Sbjct: 175 TGGSIRQPAALCGVVGLKPTYGRVSRFGLVAFSSSLDQIGPITKDVSDAALLLSVIAGKD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D TC ++ VPDY + ++G+ +GIP+EY + L + + + GAK+ Sbjct: 235 KNDTTCADINVPDYLNGIGGGVKGIKIGIPREYFAEGLDADVRTAVDNSLKIYERLGAKL 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQE 358 VE+SLPHT+YA+ YYI++ AEASSNL+R+DGVRYG R K I EMY +RS GFG E Sbjct: 295 VEVSLPHTEYAVAVYYIVANAEASSNLSRFDGVRYGFRANNIKGIDEMYCRSRSEGFGNE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK R+M+G Y LSS Y+++YL+A K+R LIK+DF FE+ VD I+ PT+P AF + + Sbjct: 355 VKRRVMLGNYALSSGYYEAYYLKASKVRNLIKKDFDTVFEK-VDCIVCPTSPVPAFKIAE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +N M +D++T+ N++G+P+IS+P ++ +P+GLQ++ F E + + Sbjct: 414 RIDNPLEM--YLSDIYTIPANLSGIPSISIPCGFSKEGLPIGLQILTNYFEEAKMLQIAY 471 Query: 479 IIEKEAGY 486 E++ + Sbjct: 472 SFERDTDF 479 >gi|225860460|ref|YP_002741969.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae Taiwan19F-14] gi|298229394|ref|ZP_06963075.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254602|ref|ZP_06978188.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502232|ref|YP_003724172.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae TCH8431/19A] gi|254790409|sp|C1CPU7|GATA_STRZT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225728337|gb|ACO24188.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae Taiwan19F-14] gi|298237827|gb|ADI68958.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae TCH8431/19A] gi|327390845|gb|EGE89185.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA04375] gi|332077722|gb|EGI88183.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA41301] Length = 488 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 299/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKHSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 GY + Sbjct: 473 TTGYHK 478 >gi|62078799|ref|NP_001014056.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Rattus norvegicus] gi|81882909|sp|Q5FWT5|QRSL1_RAT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|58400799|gb|AAH89213.1| Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Rattus norvegicus] Length = 525 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 209/496 (42%), Positives = 300/496 (60%), Gaps = 22/496 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E L+ I+ EL + I+ + +NAYI V + A AEES+KR G + Sbjct: 6 LREVSSALKQGHITPTELCKKCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQS 64 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 DL+GIP+ +KD F+T GI T S++L G+ P Y +TV Q+L D GA+++GK N+DEF Sbjct: 65 LGDLDGIPVAVKDNFSTSGIETTCASNMLKGYLPPYNATVVQRLLDQGALLMGKTNLDEF 124 Query: 128 AMGSSNETSYYGPVISPWR------------SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 AMGS + +GPV +PW + + + GGSSGGS+AAVA F C A+ Sbjct: 125 AMGSGSTDGVFGPVKNPWTYSKQYRERSRQDAQEDSHWLITGGSSGGSAAAVAAFTCFAA 184 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G+DTGGS R PA+ GTVG KP+YG SR G+I S+D GI TR V D+AI+L + Sbjct: 185 LGSDTGGSTRNPAAHCGTVGFKPSYGLVSRHGLIPLVNSMDVPGIFTRCVDDTAIVLGVL 244 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG+D D+T VN PV + G+ +GIPKEY + LS I W Q + Sbjct: 245 AGHDPKDSTTVNDPVKPTTLPSVPDVSGLCIGIPKEYLVPELSSEIRSLWSQAADLFEAE 304 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSI 353 GA+++E+ LPHT Y++ Y+++ +E +SN+AR+DG++YG R V+ +Y TR Sbjct: 305 GARVIEVCLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHRSAVDMSSTEALYAATRQE 364 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GF VK RI+ G + L Y++++++A+K+R LI DF F GVDV+LTPTT T A Sbjct: 365 GFNDVVKGRILSGNFFLLKENYENYFVKAQKVRRLIVNDFVNVFGSGVDVLLTPTTLTQA 424 Query: 414 FP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P KE+N + S +D+FT AVNMAGLPA++VP AL + +P+GLQLIG+ F + Sbjct: 425 VPYLEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVNVPVALSSQGLPIGLQLIGRAFCD 481 Query: 471 ETLFSVGQIIEKEAGY 486 + L +V + EK+ + Sbjct: 482 QQLLTVAKWFEKQVQF 497 >gi|169630422|ref|YP_001704071.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium abscessus ATCC 19977] gi|229485879|sp|B1MDU8|GATA_MYCA9 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|169242389|emb|CAM63417.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (GatA) [Mycobacterium abscessus] Length = 492 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 215/480 (44%), Positives = 306/480 (63%), Gaps = 19/480 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGI 74 + S ++S+VE+ +++ I +++ A++ V ++A AAA++ D I G L G+ Sbjct: 16 IHSGEVSSVEVTRAHLDQIASTDETYRAFLHVAGEQALAAAKDVDDAIAAGSVPSGLAGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F T+ + T S IL+ + P Y++TVT +L G +LGK NMDEFAMGSS E Sbjct: 76 PLALKDVFTTRDMPTTCGSKILENWVPPYDATVTARLRGAGIPILGKTNMDEFAMGSSTE 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S YGP +PW + PGGS GGS+AA+A F +IGTDTGGSIRQPA+ T TV Sbjct: 136 NSAYGPTRNPWDV-----ERVPGGSGGGSAAALAAFQAPLAIGTDTGGSIRQPAALTATV 190 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ PVPD Sbjct: 191 GVKPTYGTVSRFGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDEPVPDVV 250 Query: 255 RA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 A ++G+ VG+ + R D P + ++ + L GA +VE+S PH +YA Sbjct: 251 AAARAGASGDLKGVRVGVVTQLRGDGYQPGVMASFDAAVEQLTALGADVVEVSCPHFEYA 310 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIG 366 LPAYY+I P+E SSNLAR+D +RYG+RV G D E+ TR+ GFG EVK RIMIG Sbjct: 311 LPAYYLILPSEVSSNLARFDAMRYGMRV-GDDGTHSAEEVMALTRAAGFGPEVKRRIMIG 369 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY LS+ YD++Y RA+K+RTLIKRD A+EQ VDV++TP TPT+AF LG++ ++ +M Sbjct: 370 TYALSAGYYDAYYGRAQKVRTLIKRDLERAYEQ-VDVLVTPATPTTAFRLGEKVDDPLAM 428 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 429 YQF--DLCTLPLNLAGHCGMSVPSGLSADDGLPVGLQIMAPALADDRLYRVGAAYETARG 486 >gi|293610983|ref|ZP_06693282.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826635|gb|EFF85001.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 492 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 222/479 (46%), Positives = 314/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y+Q I + + +Y+ V ++A A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLQRIAKIDPLVKSYVTVTPEQALAEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S ILD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKILDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQS-IQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ + ++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNGTPVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|239622604|ref|ZP_04665635.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514601|gb|EEQ54468.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 513 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 210/479 (43%), Positives = 305/479 (63%), Gaps = 19/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E ++ D+++ ELV+++++ IE + + A+++V A A+ D + Sbjct: 11 LSAAEQAAAIKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAED 70 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +LGK N+ Sbjct: 71 KAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNL 130 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTDTGGSI Sbjct: 131 DEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTDTGGSI 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D+ D+T Sbjct: 186 RQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRDST 245 Query: 245 CV-NLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P P A + + ++GM VG+ KE D P ++ + + + LK+ GA++V Sbjct: 246 SIPEGPRPMVAAAREGAKRDLKGMKVGLIKELGGDGFQPGVEARFNEAVDKLKEMGAEVV 305 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGF 355 E+S+PH Y+L AYYII P+E SSNLARYDG+RYGLRV + M TR GF Sbjct: 306 EVSVPHIGYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYTREAGF 365 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFEQ VDV++ PT+P++AF Sbjct: 366 GDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFKKAFEQ-VDVLVAPTSPSTAFK 424 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G++ ++ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+E ++ Sbjct: 425 FGEKMDDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY 481 >gi|332870571|ref|ZP_08439313.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Acinetobacter baumannii 6013113] gi|332732131|gb|EGJ63400.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Acinetobacter baumannii 6013113] Length = 492 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 219/479 (45%), Positives = 314/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + Q+ +Y+ V ++A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S +LD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ V V DY L+ S++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSISVKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 ASLD---PVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSI 470 >gi|257454017|ref|ZP_05619291.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Enhydrobacter aerosaccus SK60] gi|257448495|gb|EEV23464.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Enhydrobacter aerosaccus SK60] Length = 498 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 207/494 (41%), Positives = 306/494 (61%), Gaps = 22/494 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ +V++ L++K+ S+ EL ++ I + +N++I V ++A A A +D Sbjct: 1 MSELHTFSVAQLAAGLKNKEFSSTELTQHFLNRIAQHDKAINSFITVTPEQALAQAAAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K + G DL G+P+ KD F T+G+ T S +L+ F Y +T+ + + G VMLG Sbjct: 61 KLLAEGKGADLTGVPLAHKDIFCTQGVLTTCGSKMLENFVAPYNATIVENCQNAGLVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K +MDEFAMGS NE+SY+G V +PW SSGGS+AAVA + G+DT Sbjct: 121 KTSMDEFAMGSDNESSYFGAVHNPWDVSRVPGG-----SSGGSAAAVAAGFAPFATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G++++A S DQAG +T D A LL ++G+D Sbjct: 176 GGSIRQPASFCGLTGIKPTYGRVSRYGMVAYASSFDQAGSFGKTAEDCAYLLSVLSGHDS 235 Query: 241 CDATCVNLPVPDYERAL----------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 D+T N VPD+ +L D+ +QG+ +G+P EY D L+ + + + + Sbjct: 236 KDSTSANKEVPDFVASLTSKRQANASHDKPLQGLRIGVPSEYFADGLNSEVKASVEAALK 295 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYEN 349 + GA +V+++L + L YY+++PAEASSNL+RYDGVRYG R + K++ ++Y Sbjct: 296 QYQALGASLVDVNLTKPEITLATYYLLAPAEASSNLSRYDGVRYGYRCDSPKNLEDLYTR 355 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 +RS GFG EV+ RI++GTY LS+ +D++Y++A+K+R LI +DF +AFE DVI TPT Sbjct: 356 SRSEGFGAEVQRRILMGTYALSAGYFDAYYIKAQKVRRLISQDFAKAFES-CDVIATPTA 414 Query: 410 PTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT+A+ +G S S IY DV+T+ VN+AGLP++S P +P+GLQLI + + Sbjct: 415 PTTAYKIGA----SLSPAEIYMGDVYTIGVNLAGLPSLSHPVGFDGDNLPVGLQLIAKAW 470 Query: 469 REETLFSVGQIIEK 482 EETL ++ Sbjct: 471 DEETLLQTADAYQQ 484 >gi|116669868|ref|YP_830801.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arthrobacter sp. FB24] gi|116609977|gb|ABK02701.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Arthrobacter sp. FB24] Length = 525 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 222/498 (44%), Positives = 318/498 (63%), Gaps = 25/498 (5%) Query: 1 MSELNFM---AVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARA 54 M+E N + + ++ +L + ++++VE+ +Y I A++ ++A++ V ++A A Sbjct: 1 MTENNVLIRLSAAQLASKLAAGEVTSVEVTQAYLDRIAAVDGGPRGVHAFLHVNTEEALA 60 Query: 55 AAEESDK-RIINGDA----RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ 109 A E D R G A +L G+PI +KD T G T A S IL+G+ Y++TV + Sbjct: 61 VAAEVDAIRAAGGTAAAELHELAGVPIAVKDLIVTIGQPTTAGSRILEGWHSPYDATVVK 120 Query: 110 KLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAG 169 +L D +LGK N+DEFAMGSS E S YGP +PW D+ PGGS GGS+AAVA Sbjct: 121 RLRDAKMPILGKTNLDEFAMGSSTEHSAYGPTRNPW----DLDRI-PGGSGGGSAAAVAA 175 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 F ++GTDTGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA Sbjct: 176 FEAPLALGTDTGGSIRQPGAVTGTVGVKPTYGSVSRYGAIAMASSLDQIGPVSRTVLDSA 235 Query: 230 ILLKAIAGYDECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 +L + I G+D D+T + P+ D A ++ GM +GI KE + ++ + + Sbjct: 236 LLHQVIGGHDPHDSTSLPDPLEDLVAAARTGNVDGMKIGIIKELHGEGYQAGVENRFNES 295 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----IL 344 + LK AGA+IVE+S P+ +YAL AYY+I P+EASSNLA++DGVRYGLRV KD I Sbjct: 296 LELLKQAGAEIVEVSCPNFKYALGAYYLIMPSEASSNLAKFDGVRYGLRVLPKDAPLTIE 355 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 + TR+ GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AF Q DV+ Sbjct: 356 RVMGATRAAGFGDEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEAAFAQ-ADVL 414 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQL 463 ++PT PT+AF LG++ N+ +M NDV T+ NMAG+P +S+P L E +P+G+QL Sbjct: 415 ISPTAPTTAFKLGEKLNDPLAM--YLNDVATIPANMAGVPGLSLPGGLADEDGLPVGIQL 472 Query: 464 IGQPFREETLFSVGQIIE 481 + ++ L+ VG ++E Sbjct: 473 LAPARQDARLYRVGAVLE 490 >gi|23335640|ref|ZP_00120874.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Bifidobacterium longum DJO10A] gi|23465001|ref|NP_695604.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum NCC2705] gi|189440068|ref|YP_001955149.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum DJO10A] gi|227545721|ref|ZP_03975770.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312133406|ref|YP_004000745.1| gata [Bifidobacterium longum subsp. longum BBMN68] gi|317482758|ref|ZP_07941770.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Bifidobacterium sp. 12_1_47BFAA] gi|322688403|ref|YP_004208137.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. infantis 157F] gi|322690422|ref|YP_004219992.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. longum JCM 1217] gi|39931589|sp|Q8G768|GATA_BIFLO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485753|sp|B3DU32|GATA_BIFLD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|23325602|gb|AAN24240.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium longum NCC2705] gi|189428503|gb|ACD98651.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Bifidobacterium longum DJO10A] gi|227213837|gb|EEI81676.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. infantis ATCC 55813] gi|291517539|emb|CBK71155.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bifidobacterium longum subsp. longum F8] gi|311772633|gb|ADQ02121.1| GatA [Bifidobacterium longum subsp. longum BBMN68] gi|316915793|gb|EFV37203.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Bifidobacterium sp. 12_1_47BFAA] gi|320455278|dbj|BAJ65900.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. longum JCM 1217] gi|320459739|dbj|BAJ70359.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. infantis 157F] Length = 513 Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 210/479 (43%), Positives = 305/479 (63%), Gaps = 19/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E ++ D+++ ELV+++++ IE + + A+++V A A+ D + Sbjct: 11 LSAAEQAAAVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAED 70 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +LGK N+ Sbjct: 71 KAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNL 130 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTDTGGSI Sbjct: 131 DEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTDTGGSI 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D+ D+T Sbjct: 186 RQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRDST 245 Query: 245 CV-NLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P P A + + ++GM VG+ KE D P ++ + + + LK+ GA++V Sbjct: 246 SIPEGPRPMVAAAREGAKRDLKGMKVGLIKELGGDGFQPGVEARFNEAVDKLKEMGAEVV 305 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGF 355 E+S+PH Y+L AYYII P+E SSNLARYDG+RYGLRV + M TR GF Sbjct: 306 EVSVPHIGYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYTREAGF 365 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFEQ VDV++ PT+P++AF Sbjct: 366 GDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFKKAFEQ-VDVLVAPTSPSTAFK 424 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G++ ++ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+E ++ Sbjct: 425 FGEKMDDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY 481 >gi|83721575|ref|YP_440706.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia thailandensis E264] gi|167617479|ref|ZP_02386110.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia thailandensis Bt4] gi|257140646|ref|ZP_05588908.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia thailandensis E264] gi|109829655|sp|Q2T293|GATA_BURTA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|83655400|gb|ABC39463.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia thailandensis E264] Length = 496 Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 219/493 (44%), Positives = 313/493 (63%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 AKGEAGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKTWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 TLGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|221201877|ref|ZP_03574914.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2M] gi|221207617|ref|ZP_03580625.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2] gi|221172463|gb|EEE04902.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2] gi|221178297|gb|EEE10707.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2M] Length = 496 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 215/499 (43%), Positives = 309/499 (61%), Gaps = 23/499 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V + A A+ +D + Sbjct: 1 MHAKSLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVHVEPELTLAQAKAADAEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ARGAGGPLTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + D+ R L Q + G+ +G+P EY D L+ + + + Sbjct: 235 TSLERDDEDFTRHLGQPWAAGNDAAKPLAGLRIGLPNEYFGDGLADDVRAAIDAALKQYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ LG + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFN 471 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + V ++ + + Sbjct: 472 EARMLQVADAFQRATDWHK 490 >gi|326793290|ref|YP_004311111.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Clostridium lentocellum DSM 5427] gi|326544054|gb|ADZ85913.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium lentocellum DSM 5427] Length = 486 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 211/480 (43%), Positives = 303/480 (63%), Gaps = 10/480 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E R+ L K+I++VEL Y+ I+ + Q+++YI V ++A AAE++DKRI G++ Sbjct: 10 ELREMLDQKEITSVELTKYYLDRIKQLDDQIDSYITVCEEEAIKAAEKADKRIAEGNSNL 69 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIPI IKD T+GI T S +L F P Y +TV +KL AV+LGK++MDEFAMG Sbjct: 70 LTGIPISIKDNICTEGILTTCASKMLYNFVPPYNATVIKKLLAEDAVILGKVSMDEFAMG 129 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +TSYY +P+ D T PGGSSGGS+AAVA L ++G+DTGGSIRQPA+F Sbjct: 130 GSTQTSYYKKTKNPY---DITR--VPGGSSGGSAAAVAAKLSVVALGSDTGGSIRQPAAF 184 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPTYG SR G+++F SLDQ G I ++ ++ A LLK I+GYD D T + + Sbjct: 185 CGVTGMKPTYGTVSRFGLVAFGSSLDQIGPIAQSAKECAALLKVISGYDGHDGTSSHKEI 244 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D+ LD I+G+ + +PKE+ + + + ++ + I + GA+IVE+S+P +YA Sbjct: 245 -DFSSQLDMDIKGLKIAVPKEFFGEGIDEEVKESVLEAIKKYESLGAEIVEVSMPSLKYA 303 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + AYY++S AEASSNL+RYDG+++G + K E TR GFG EVK RI++GTY Sbjct: 304 IAAYYLLSSAEASSNLSRYDGIKFGYCTPKAKTYEERITRTRKEGFGNEVKRRILLGTYA 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD++Y +A IR IK+++ E F + DV++TPT PT+A+ +G EN+ M Sbjct: 364 LSSGYYDAYYKKALYIRQKIKQEYEEIF-KSCDVMITPTAPTTAYKIGAIENDPVKM--Y 420 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 D+ TV VN+AGLPAI+ MP+G+ ++G+ F + + V EKE P Sbjct: 421 LADICTVTVNIAGLPAINTTCGYDSDGMPIGMSIVGKAFDDAKVIGVANAFEKEFTRIDP 480 >gi|315655580|ref|ZP_07908478.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus curtisii ATCC 51333] gi|315489644|gb|EFU79271.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus curtisii ATCC 51333] Length = 507 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 217/491 (44%), Positives = 308/491 (62%), Gaps = 17/491 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD- 60 +EL ++ E +L +K++++ ELV + + IE+ ++A++ V + A A++ D Sbjct: 4 TELYLLSAHELAAKLAAKEVTSEELVRIFAERIEHLEKDVHAFLFVDVEGALQTAKKVDT 63 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+PI IKD +G T S IL+G+ P Y++T+ KL + G +LG Sbjct: 64 DRAAGKKLHPFAGVPIAIKDNMVQRGKPTTCASKILEGWLPPYDATIVLKLQEAGLPILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S +GP +PW + PGGS GGS+AAVA F+ ++G+DT Sbjct: 124 KTNMDEFAMGSSTEHSAFGPTRNPWDL-----QRIPGGSGGGSAAAVAAFMVPWALGSDT 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG KPTYG SR G+I+ SLDQ G +TR VRD+A L I G+D Sbjct: 179 GGSIRQPGAVTGTVGAKPTYGAVSRYGLIAMGSSLDQIGPVTRDVRDAAALQMIIGGHDP 238 Query: 241 CDATCVNLPVPDYERALDQ---SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T ++ PVPD AL + G+ VG+ K+ + + + + +QQ + L++AGA Sbjct: 239 LDSTSLDEPVPDITGALAKIGTDATGLRVGVVKQLQGEGYQAGVLQRFQQAVERLQEAGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTRSI 353 +VE+ P +YAL AYY+I PAE SSNLAR+DGVRYGLRV EG+ E M TR Sbjct: 299 NVVEVDCPSFEYALAAYYLIMPAEVSSNLARFDGVRYGLRVLPQEGEVTTERMMAATREA 358 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GT+VLS+ YD++Y A+K+RTL++RD AFEQ DV+LTPT PT+A Sbjct: 359 GFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLLQRDLAAAFEQ-CDVLLTPTAPTTA 417 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F G + ++ SM NDV T+ NMAG+P ISVPA + E +P+G+Q++ + T Sbjct: 418 FKFGDKLDDPMSM--YLNDVATIPANMAGIPGISVPAGVAPEDGLPVGVQILAPARGDVT 475 Query: 473 LFSVGQIIEKE 483 ++ V +E + Sbjct: 476 MYEVAARMEAQ 486 >gi|15902438|ref|NP_357988.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae R6] gi|116516449|ref|YP_815907.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae D39] gi|168485570|ref|ZP_02710078.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC1087-00] gi|221231300|ref|YP_002510452.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae ATCC 700669] gi|39931555|sp|Q8DR10|GATA_STRR6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|122279207|sp|Q04M41|GATA_STRP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790405|sp|B8ZLK1|GATA_STRPJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|15457956|gb|AAK99198.1| Glu-tRNAGln amidotransferase subunit A [Streptococcus pneumoniae R6] gi|116077025|gb|ABJ54745.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus pneumoniae D39] gi|183571151|gb|EDT91679.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC1087-00] gi|220673760|emb|CAR68259.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae ATCC 700669] Length = 488 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKHSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 GY + Sbjct: 473 TTGYHK 478 >gi|288919117|ref|ZP_06413456.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Frankia sp. EUN1f] gi|288349461|gb|EFC83699.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Frankia sp. EUN1f] Length = 517 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 221/477 (46%), Positives = 309/477 (64%), Gaps = 16/477 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++SA E + + I + ++A++ V A+ A A A D R G+ L G+P+ + Sbjct: 42 ELSAEEATLAALDRIAKVDDAVHAFLHVDAEGALATARAVDARRAAGERLGPLAGVPLAL 101 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F +G+ T S IL+G+RP Y++TV +L V+LGK+NMDEFAMGSS E S Y Sbjct: 102 KDVFTARGMPTTCGSRILEGWRPPYDATVVSRLRAADVVILGKVNMDEFAMGSSTENSAY 161 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW D T PGGSSGGS+AAVA F SIGTDTGGSIRQPA+ G VG+KP Sbjct: 162 GPTRNPW---DLTR--IPGGSSGGSAAAVAAFEAPLSIGTDTGGSIRQPAAVCGLVGVKP 216 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERAL 257 TYG SR G+++F+ SLDQAG ITRTV D+A+L AIAG+D D+T V LPVP E A Sbjct: 217 TYGGVSRYGLVAFSSSLDQAGPITRTVADAALLHAAIAGHDPLDSTSVELPVPPVVEAAA 276 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + I+GM VG+ +E + P + + ++ L GA++VE+S PH YA+ AYY+I Sbjct: 277 RRDIRGMRVGVVRELAGEGYDPGVQAAFDAAVAELAGLGAEVVEVSCPHFTYAMAAYYLI 336 Query: 318 SPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +P+E SSNLAR+D +R+GLR G D E+ TR +GFG EVK R+M+GTY LSS Sbjct: 337 APSECSSNLARFDAMRFGLRA-GDDGRAGAEEVMSRTRDVGFGAEVKRRVMLGTYALSSG 395 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A+K+RTLI RDF A+EQ DV+++PTTPT AFP+G + ++ +M +D+ Sbjct: 396 YYDAYYGQAQKVRTLISRDFAAAYEQ-ADVLVSPTTPTPAFPIGDKVDDPVAM--YLSDL 452 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 T+ N+AG PA+S+P+ L +P+G+Q++ F ++ L+ VG +E R H Sbjct: 453 CTIPSNLAGGPAMSLPSGLV-AGLPVGIQIMAPAFADDRLYLVGGALEAALDARRGH 508 >gi|319940714|ref|ZP_08015056.1| glutamyl-tRNA(Gln) amidotransferase [Sutterella wadsworthensis 3_1_45B] gi|319805865|gb|EFW02632.1| glutamyl-tRNA(Gln) amidotransferase [Sutterella wadsworthensis 3_1_45B] Length = 484 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 303/486 (62%), Gaps = 11/486 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F +V E RL +++ISAVEL Y++ IE + +NA+++V ++ AE +D R+ Sbjct: 5 FDSVGELSRRLHNREISAVELARGYLERIE-AKKNLNAFLDVRPEETLKQAEAADARLSA 63 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIPI KD F TK + A S +L G+ +++TV ++L + G V LGKLN D Sbjct: 64 GTAGPLTGIPIAHKDIFVTKEWSSTAASRMLKGYMSPFDATVVRQLKNAGMVCLGKLNCD 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS NE S +G V +PW M++ + GGS+ +A +A + GTDTGGSIR Sbjct: 124 EFAMGSGNENSAFGRVHNPW-DMNAVPGGSSGGSAAAVAAGLAPIVT----GTDTGGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +PASFTG G+KPTYGR SRLG+I+FA SLD AG++ + D A +L A+ G+D D+T Sbjct: 179 EPASFTGVTGVKPTYGRPSRLGMIAFASSLDTAGLLGHSAEDCAAVLGAMVGHDPWDSTS 238 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VN+P D+ R L + I+GM +G+P + + L P + K+ + + + + GA+IV+I L Sbjct: 239 VNMPTEDFTRDLAKPIKGMRIGVPYSWMGEGLDPEVRKSIDEVLDFYRREGAEIVDIELK 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 + +P YY+++ AEASSNL+R+DGVRYG R E DIL+M + +R GFG E K RIM Sbjct: 299 MARLGVPVYYVVACAEASSNLSRFDGVRYGHRAAEYTDILDMMKRSRDEGFGPEPKRRIM 358 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTYVLS YD++YL+A+++R LI +F + F+ VD I P T +A+ G N+ Sbjct: 359 IGTYVLSHGYYDAYYLKAQRVRRLIANEFHDVFKT-VDAIALPVTTGTAYDFG---TNAD 414 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + +D++TV ++AGLP +++P + P+GLQL+G+ F E L + ++ Sbjct: 415 PVSAYLSDLYTVPASLAGLPGVAMPCGIHSNGRPIGLQLLGEHFTEARLLQLAAQWQRST 474 Query: 485 GYFRPH 490 + H Sbjct: 475 DWHLRH 480 >gi|229823249|ref|ZP_04449318.1| hypothetical protein GCWU000282_00547 [Catonella morbi ATCC 51271] gi|229787415|gb|EEP23529.1| hypothetical protein GCWU000282_00547 [Catonella morbi ATCC 51271] Length = 488 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 214/475 (45%), Positives = 309/475 (65%), Gaps = 9/475 (1%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++ L + ++ +LV + + IE +++Q+ A++ + A AAA ++D R DA L Sbjct: 12 KEGLAAGKFTSQDLVRAAFERIEATDAQVAAFLALNKDLALAAAAQADARGYGADAPILN 71 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPIG+KD TKG+ T A S +L+ F P Y++TV +KL GA+++GKLNMDEFAMG+S Sbjct: 72 GIPIGVKDNIVTKGLVTTAASRMLEDFVPTYDATVVEKLHQAGAIIVGKLNMDEFAMGAS 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + +PW PGGSSGGS+AAVA AS+GTDTGGSIRQPA+FTG Sbjct: 132 CERSAFKTTRNPWDL-----NRVPGGSSGGSAAAVAARQVPASLGTDTGGSIRQPAAFTG 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYG SR G+I+F SLDQ G +T TV D+A++L+AIAG+D D+T + + Sbjct: 187 LVGMKPTYGLVSRYGLIAFGSSLDQIGPMTLTVADNALVLEAIAGHDAKDSTSLPEIDTN 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y + Q + G+ +G P +YR + ++ I + Q ++ + GA+IVEISLPH++Y + Sbjct: 247 YSAKIGQPLAGLKIGFPVDYRSEAINQEIRERMDQAAAYFESQGAEIVEISLPHSKYGIN 306 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYII+ +EASSNL R+DG+RYG R + L E+Y +R+ GFG EV+ RIM+GT+ LS Sbjct: 307 VYYIIASSEASSNLQRFDGIRYGYRSQSAQTLEEVYVQSRTEGFGPEVQRRIMLGTFSLS 366 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD+++ +A ++RTLI +DF +AF Q DVI+ P T ++AF +G + M Sbjct: 367 SGYYDAYFKKAAQVRTLIIQDFEQAF-QACDVIMGPATTSTAFEIGGRIQDPIEM--YVA 423 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D+ TV N+AGLPA+SVPA L + +P+GLQL+ +P E T++ V E Y Sbjct: 424 DLLTVPANLAGLPALSVPAGLDQAGLPIGLQLMAKPLDEATIYQVAANFEAGHDY 478 >gi|294496612|ref|YP_003543105.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanohalophilus mahii DSM 5219] gi|292667611|gb|ADE37460.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanohalophilus mahii DSM 5219] Length = 473 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 205/461 (44%), Positives = 293/461 (63%), Gaps = 16/461 (3%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 SA E+V SY+ IE S+ +NA+ VA+ A A+++D I G L G+PI IKD Sbjct: 16 SAEEVVASYLDRIEKSD--INAFT-CVAEDAIDQAKKADSLNIEGP---LAGVPIAIKDN 69 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 +T+G+ T S IL+G+ P Y++ V ++L GAV++GK NMDEF MG+S ETS YGP Sbjct: 70 ISTRGLPTTCSSAILNGYVPPYDAHVIERLRKAGAVIIGKSNMDEFGMGTSTETSTYGPT 129 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 ++PW + + G ++ ++ V S+G+DTGGS+R PA+F GTVG+KPTYG Sbjct: 130 LNPWDTERVAGGSSGGSAAAVAAGQVP-----VSLGSDTGGSVRCPAAFCGTVGLKPTYG 184 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 SR G++S+A SL+Q G + V D A L+ I YD D+TCVN Y AL + Sbjct: 185 AVSRYGLVSYANSLEQIGPLANRVEDIATLMDVIGTYDNRDSTCVNHDA-GYTDALQDDV 243 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 +G+ +G+P+EY + + + K I +D GA+ ++S+P+T YAL AYYII+ +E Sbjct: 244 EGLKIGVPEEYFGEGIDDNVQKLVWDAIGKFEDMGAEYTKVSMPNTPYALAAYYIIAMSE 303 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 ASSNLAR+DG RYG R EG++ M TR FG EVK RI+IGTY LS+ +D +YL+ Sbjct: 304 ASSNLARFDGTRYGTRSEGENWHMMASKTRQEKFGAEVKRRILIGTYALSAGYHDKYYLK 363 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 A K+RTL+K+DF AFE VDV++ PT PT AF +G++ ++ S+ +DV TV +N+A Sbjct: 364 ALKVRTLVKQDFERAFED-VDVLMAPTMPTPAFKIGEKMDDPLSL--YLSDVNTVPINLA 420 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 G+P+ISVP E +P+GLQ+IG+ F E T+ EK Sbjct: 421 GVPSISVPCGFSE-GLPVGLQVIGKYFDEATILKAANAFEK 460 >gi|161526274|ref|YP_001581286.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia multivorans ATCC 17616] gi|189349012|ref|YP_001944640.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia multivorans ATCC 17616] gi|229485862|sp|A9AC51|GATA_BURM1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|160343703|gb|ABX16789.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans ATCC 17616] gi|189333034|dbj|BAG42104.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Burkholderia multivorans ATCC 17616] Length = 499 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 215/499 (43%), Positives = 309/499 (61%), Gaps = 23/499 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V + A A+ +D + Sbjct: 1 MHAKSLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVHVEPELTLAQAKAADAEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ARGAGGPLTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + D+ R L Q + G+ +G+P EY D L+ + + + Sbjct: 235 TSLERDDEDFARHLGQPWAPGNDAGKPLAGLRIGLPNEYFGDGLADDVRAAIDAALKQYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ LG + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFN 471 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + V ++ + + Sbjct: 472 EARMLQVADAFQRATDWHK 490 >gi|167579378|ref|ZP_02372252.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia thailandensis TXDOH] Length = 496 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 219/493 (44%), Positives = 313/493 (63%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 AKGEAGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKTWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|107024039|ref|YP_622366.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia cenocepacia AU 1054] gi|116691126|ref|YP_836749.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia cenocepacia HI2424] gi|170734457|ref|YP_001766404.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia cenocepacia MC0-3] gi|123371175|sp|Q1BSL2|GATA_BURCA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217648|sp|A0KBH9|GATA_BURCH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485860|sp|B1K0H7|GATA_BURCC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|105894228|gb|ABF77393.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia cenocepacia AU 1054] gi|116649215|gb|ABK09856.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia cenocepacia HI2424] gi|169817699|gb|ACA92282.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia cenocepacia MC0-3] Length = 496 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 216/495 (43%), Positives = 307/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVHVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 GGALTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY L+ + T + + GA Sbjct: 239 RDDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGAGLADDVRATIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTYVLS YD++YL+A+KIR +I DF EAF+ DVI+ P +PT A+ L Sbjct: 359 PEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDVIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F E + Sbjct: 418 GAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|293364857|ref|ZP_06611574.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus oralis ATCC 35037] gi|307703106|ref|ZP_07640053.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus oralis ATCC 35037] gi|291316307|gb|EFE56743.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus oralis ATCC 35037] gi|307623499|gb|EFO02489.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus oralis ATCC 35037] Length = 488 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 206/486 (42%), Positives = 301/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ + +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSREAAINAFVTIAEEQALAQAKTIDETG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W D T PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAW---DQTK--VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDASNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|298345131|ref|YP_003717818.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus curtisii ATCC 43063] gi|304390718|ref|ZP_07372670.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235192|gb|ADI66324.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus curtisii ATCC 43063] gi|304325601|gb|EFL92847.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 507 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 217/491 (44%), Positives = 308/491 (62%), Gaps = 17/491 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD- 60 +EL ++ E +L +K++++ ELV + + IE+ ++A++ V + A A++ D Sbjct: 4 AELYLLSAHELAAKLVAKEVTSEELVRIFAERIEHLEKDVHAFLFVDVEGALQTAKQVDA 63 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+PI IKD +G T S IL+G+ P Y++T+ KL + G +LG Sbjct: 64 DRAAGKKLHPFAGVPIAIKDNMVQRGKPTTCASKILEGWLPPYDATIVLKLQEAGLPILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S +GP +PW + PGGS GGS+AAVA F+ ++G+DT Sbjct: 124 KTNMDEFAMGSSTEHSAFGPTRNPWDL-----ERIPGGSGGGSAAAVAAFMVPWALGSDT 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG KPTYG SR G+I+ SLDQ G +TR VRD+A L I G+D Sbjct: 179 GGSIRQPGAVTGTVGAKPTYGAVSRYGLIAMGSSLDQIGPVTRDVRDAAALQMIIGGHDP 238 Query: 241 CDATCVNLPVPDYERALDQ---SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T ++ PVPD AL + G+ VG+ K+ + + + + +QQ + L++AGA Sbjct: 239 LDSTSLDEPVPDITGALAKIGTDATGLRVGVVKQLQGEGYQAGVLQRFQQAVERLQEAGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTRSI 353 +VE+ P +YAL AYY+I PAE SSNLAR+DGVRYGLRV EG+ E M TR Sbjct: 299 NVVEVDCPSFEYALAAYYLIMPAEVSSNLARFDGVRYGLRVLPQEGEVTTERMMAATREA 358 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GT+VLS+ YD++Y A+K+RTL++RD AFEQ DV+LTPT PT+A Sbjct: 359 GFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLLQRDLAAAFEQ-CDVLLTPTAPTTA 417 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F G + ++ SM NDV T+ NMAG+P ISVPA + E +P+G+Q++ + T Sbjct: 418 FKFGDKLDDPMSM--YLNDVATIPANMAGIPGISVPAGVAPEDGLPVGVQILAPARGDVT 475 Query: 473 LFSVGQIIEKE 483 ++ V +E + Sbjct: 476 MYEVAARMEAQ 486 >gi|213691179|ref|YP_002321765.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790380|sp|B7GTU6|GATA_BIFLI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|213522640|gb|ACJ51387.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457236|dbj|BAJ67857.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 513 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 210/479 (43%), Positives = 305/479 (63%), Gaps = 19/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E ++ D+++ ELV+++++ IE + + A+++V A A+ D + Sbjct: 11 LSAAEQAAAIKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAED 70 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +LGK N+ Sbjct: 71 KAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNL 130 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTDTGGSI Sbjct: 131 DEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTDTGGSI 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D+ D+T Sbjct: 186 RQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRDST 245 Query: 245 CV-NLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P P A + + ++GM VG+ KE + P ++ + + + LKD GA++V Sbjct: 246 SIPEGPRPMVAAAREGAKRDLKGMKVGLIKELGGEGFQPGVEARFGEAVDKLKDMGAEVV 305 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGF 355 E+S PH Y+L AYYII P+E SSNLARYDG+RYGLRV + M TR GF Sbjct: 306 EVSCPHIGYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYTREAGF 365 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFEQ VDV+++PT+P++AF Sbjct: 366 GDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFKKAFEQ-VDVLISPTSPSTAFK 424 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G++ ++ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+E ++ Sbjct: 425 FGEKMDDPLAM--YVNDIATIPANLAGMPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY 481 >gi|149006426|ref|ZP_01830138.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP18-BS74] gi|307126652|ref|YP_003878683.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae 670-6B] gi|147762203|gb|EDK69165.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP18-BS74] gi|306483714|gb|ADM90583.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae 670-6B] gi|332076881|gb|EGI87343.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA17545] Length = 488 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGSFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|312797577|ref|YP_004030499.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia rhizoxinica HKI 454] gi|312169352|emb|CBW76355.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC 6.3.5.-) [Burkholderia rhizoxinica HKI 454] Length = 497 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 211/490 (43%), Positives = 305/490 (62%), Gaps = 24/490 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K +SA+EL ++Q IE + ++NA+I+V Q AA +D+R+ G+ Sbjct: 5 SLTELRAALDTKQVSALELAQHFLQRIEAAR-ELNAFIDVNPQLTLDAARAADQRLARGE 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ KD F T+G + A S +L + +++TV ++L G V LGK NMDEF Sbjct: 64 RGPLLGLPVAHKDVFVTRGWKSSAGSRMLADYVSAFDATVVERLAAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S++GPV +PW SSGGS+AAVA L + GTDTGGSIRQP Sbjct: 124 AMGSSNENSFFGPVRNPWDRNAVPGG-----SSGGSAAAVAAGLAPVATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS TG GIKPTYGR SR G+I+FA SLDQ G + R+ D A++L A++G+D D+T + Sbjct: 179 ASLTGITGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALVLGAMSGFDPRDSTSLQ 238 Query: 248 LPVPDYERALDQSIQ-----------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 DY R L + Q G+ +G+P+EY LS + + ++ G Sbjct: 239 RDAEDYTRWLGKPWQDTGALAGRPLAGLRIGLPREYFGAGLSGDVQAAIDVALRQYEELG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGF 355 A V++SLP T ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +RS G Sbjct: 299 ATRVDVSLPKTALSIPVYYVIAPAEASSNLSRFDGVRYGHRASEYRDLLDMYKKSRSEGL 358 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTYVLS YD++YL+A+KIR +I +DF AF Q DVI+ P +P+ A+ Sbjct: 359 GAEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQNAFAQ-CDVIMGPVSPSVAWN 417 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREET 472 LG++ ++ M D++T++ ++AGLP +SVP P+GLQ+IG F E Sbjct: 418 LGEKSDDPIQM--YLADIYTLSTSLAGLPGMSVPCGFGTGANATRPVGLQIIGNYFNEAR 475 Query: 473 LFSVGQIIEK 482 + V ++ Sbjct: 476 MLQVADAFQR 485 >gi|300692933|ref|YP_003753928.1| glutamyl-tRNA(Gln) amidotransferase subunit A (glu-ADT subunit A) [Ralstonia solanacearum PSI07] gi|299079993|emb|CBJ52669.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Ralstonia solanacearum PSI07] Length = 495 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 223/482 (46%), Positives = 311/482 (64%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K++SA EL Y+ IE + + +NA+I V + A A +D R+ GDA L GI Sbjct: 12 QLAAKEVSAEELARHYLARIE-ARADLNAFIHVDPEATLAQARAADARLAAGDAGPLAGI 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +LDG+ +++ V ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLDGYVSPFDAAVVERLAAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S++GPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSHFGPVKNPWDV-----GHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARDSTSLEPGRGGDA 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L Q ++ G+ +G+PKEY + L+ + + ++ L+ GA +V+ Sbjct: 246 EDFSRLLGQPLEGADAARPLAGLRIGLPKEYFSEGLADDVRAAVRAALAELEKLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY TR+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKTRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF+Q DVI+ P PT A+ LG++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFRNAFQQ-CDVIMGPVAPTVAWKLGEKT 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPLQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|146318010|ref|YP_001197722.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus suis 05ZYH33] gi|146320193|ref|YP_001199904.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus suis 98HAH33] gi|253751221|ref|YP_003024362.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis SC84] gi|253753122|ref|YP_003026262.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis P1/7] gi|253754944|ref|YP_003028084.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis BM407] gi|166217721|sp|A4VZG5|GATA_STRS2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217723|sp|A4VT83|GATA_STRSY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|145688816|gb|ABP89322.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Streptococcus suis 05ZYH33] gi|145690999|gb|ABP91504.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Streptococcus suis 98HAH33] gi|251815510|emb|CAZ51090.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis SC84] gi|251817408|emb|CAZ55146.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis BM407] gi|251819367|emb|CAR44769.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis P1/7] gi|292557786|gb|ADE30787.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Streptococcus suis GZ1] gi|319757496|gb|ADV69438.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus suis JS14] Length = 488 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 210/486 (43%), Positives = 303/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISAVEL + ++ I++ ++A++ + A A A D++ Sbjct: 3 FNNKTIDELHDLLVKKEISAVELTKATLEDIKSREGAVDAFLTITEDAALAQAAALDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + + +++GK N Sbjct: 63 IDAD-NVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVAQAYAKDMIIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG SNE S + P + W D T PGGSSGGS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSNENSAFKPTKNAW---DQTK--VPGGSSGGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL I+G+D DA Sbjct: 177 IRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGHDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + D+ + Q I+GM + +PKEY + + P + +T + L+ GA I E+S Sbjct: 237 TSTINEIADFTSKIGQDIKGMKIALPKEYMGEGIDPQVKETILKAAKHLESLGAIIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y TRS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDATNLDEIYVKTRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PT PT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP +S+PA E +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGLSIPAGFVE-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|327538554|gb|EGF25216.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopirellula baltica WH47] Length = 499 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 216/490 (44%), Positives = 305/490 (62%), Gaps = 19/490 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + SE +L S +++AVE++ + AI S +NA+ V + A AAE D G Sbjct: 4 SASEILKQLDSGEVTAVEVIGQSLAAIRASQPSINAFTHVAEETAMQAAEAVDADRKAGK 63 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+P+ IKD T + T S +L+GF P Y++TV +L GA+++GK NMDE Sbjct: 64 ALGPLAGLPVAIKDVLCTSDMPTTCSSKMLEGFVPPYDATVVARLKSAGAIVVGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG+S ETS G +PW D+T TPGGSSGG++AAV S+GTDTGGSIRQ Sbjct: 124 FAMGASTETSAMGVTGNPW---DTTK--TPGGSSGGAAAAVVAGTVPLSLGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G G+KPTYGR SR G+++FA SLDQAG + +V D AI L+A+AGYD D+T V Sbjct: 179 PAAFCGITGLKPTYGRVSRYGLVAFASSLDQAGPMGWSVDDVAIGLQAMAGYDPRDSTSV 238 Query: 247 NLPVPDYERAL-DQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N VPD+ A+ + ++GM +G+ +E D +SP + S ++ GA+IVE+ L Sbjct: 239 NAEVPDFTPAMAAEDVRGMRIGVLREGLDQDGISPAVRDALATAESVFREQGAEIVEVEL 298 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-------LE-MYENTRSIGFG 356 PH++Y +P YY+I+P EASSNL+R+DG YG RV +I LE MY +R+ GFG Sbjct: 299 PHSKYWVPTYYVIAPCEASSNLSRFDGAHYGYRVADAEIAAADSGPLEAMYSLSRAGGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIM+GTY LS YD++Y +A K+R LI+ D+ AF+Q VD++L P TP+ AF L Sbjct: 359 SEVKRRIMVGTYALSEGYYDAYYNQALKVRRLIRNDYDAAFQQ-VDLMLGPVTPSPAFAL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ ++ +M D+FTV N+AG+PAIS+P +P+G+QL E L Sbjct: 418 NEKTDDPIAM--YLCDLFTVGANLAGVPAISLPGGFDADGLPVGVQLQAPVMEETRLLRA 475 Query: 477 GQIIEKEAGY 486 G + + + + Sbjct: 476 GNVFQMASDF 485 >gi|254246881|ref|ZP_04940202.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia cenocepacia PC184] gi|124871657|gb|EAY63373.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia cenocepacia PC184] Length = 496 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 215/495 (43%), Positives = 308/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA+++V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVQVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 GGALTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY L+ + T + + GA Sbjct: 239 RDDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGAGLADDVRATIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTYVLS YD++YL+A+KIR +I DF EAF+ D+I+ P +PT A+ L Sbjct: 359 PEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDLIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F E + Sbjct: 418 GAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|134093455|ref|YP_001098530.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Herminiimonas arsenicoxydans] gi|166217674|sp|A4G1L4|GATA_HERAR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|133737358|emb|CAL60401.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Herminiimonas arsenicoxydans] Length = 485 Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 202/475 (42%), Positives = 291/475 (61%), Gaps = 15/475 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E L++K ISA EL +++ + S +NA++ V A +D+RI +G+A Sbjct: 6 IKELSALLQTKKISATELAQLFLKRM--GASDLNAFLHVDEALTLQQAAAADQRIASGNA 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F T+ + A S +L+ + +++TV + G V LGKLN DEFA Sbjct: 64 GVLTGIPIAHKDIFVTRNWRSTAGSKMLENYVSPFDATVVENFNQAGMVTLGKLNCDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE SY+G V +PW D T ++ A L AS TDTGGSIRQPA Sbjct: 124 MGSSNENSYFGAVKNPW---DKTAIPGGSSGGSAAAIAAR--LTPASTATDTGGSIRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G GIKPTYGR SR G+I+FA SLDQ G I +T D +LL A+ +DE D+T V Sbjct: 179 ALCGVTGIKPTYGRVSRFGMIAFASSLDQGGPIAKTAEDCGLLLNAMVSFDERDSTSVER 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D+ R L+ ++G+ +GIP+EY LS +++ + + + GA +V+ISLP T+ Sbjct: 239 DKEDFTRDLNAPLEGLKIGIPREYFGAGLSADVEQAVRAALGEYEKLGATLVDISLPKTE 298 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 ++P YY+I+PAEASSNL+R+DGVRYG R + D+ +MY TR+ GFG+EVK RI++G Sbjct: 299 LSIPTYYVIAPAEASSNLSRFDGVRYGFRAKDYTDLSDMYCKTRAEGFGEEVKRRILVGA 358 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++YL+A+KIR LI +DF +AF DVI+ P P+ A+ LG + ++ + Sbjct: 359 YVLSHGYYDAYYLQAQKIRRLIAQDFQQAFTL-CDVIMGPVAPSVAWDLGDKADD--PVA 415 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREETLFSVGQ 478 + D+FT++ ++AGLP +S+P + K P+GLQ+IG F E L +V Sbjct: 416 NYLADIFTLSTSLAGLPGMSIPCGFGQGEKNAKRPVGLQIIGNYFAEAKLLNVAH 470 >gi|315656505|ref|ZP_07909394.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493064|gb|EFU82666.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 507 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 217/491 (44%), Positives = 307/491 (62%), Gaps = 17/491 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ E +L +K++++ ELV + + IE+ ++A++ V + A A++ D Sbjct: 4 AELYLLSAHELAAKLVAKEVTSEELVRIFAERIEHLEKDVHAFLFVDVEGALQTAKQVDA 63 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+PI IKD +G T S IL+G+ P Y++T+ KL + G +LG Sbjct: 64 DRAAGKKLHPFAGVPIAIKDNMVQRGKPTTCASKILEGWLPPYDATIVLKLQEAGLPILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S +GP +PW PGGS GGS+AAVA F+ ++G+DT Sbjct: 124 KTNMDEFAMGSSTEHSAFGPTRNPWDLAR-----IPGGSGGGSAAAVAAFMVPWALGSDT 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG KPTYG SR G+I+ SLDQ G +TR VRD+A L I G+D Sbjct: 179 GGSIRQPGAVTGTVGAKPTYGAVSRYGLIAMGSSLDQIGPVTRDVRDAAALQMIIGGHDP 238 Query: 241 CDATCVNLPVPDYERALDQ---SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T ++ PVPD AL + G+ VG+ K+ + + + + +QQ + L++AGA Sbjct: 239 LDSTSLDEPVPDITGALAKIGTDATGLRVGVVKQLQGEGYQAGVLQRFQQAVERLQEAGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTRSI 353 +VE+ P +YAL AYY+I PAE SSNLAR+DGVRYGLRV EG+ E M TR Sbjct: 299 NVVEVDCPSFEYALAAYYLIMPAEVSSNLARFDGVRYGLRVLPQEGEVTTERMMAATREA 358 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GT+VLS+ YD++Y A+K+RTL++RD AFEQ DV+LTPT PT+A Sbjct: 359 GFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLLQRDLAAAFEQ-CDVLLTPTAPTTA 417 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F G + ++ SM NDV T+ NMAG+P ISVPA + E +P+G+Q++ + T Sbjct: 418 FKFGDKLDDPMSM--YLNDVATIPANMAGIPGISVPAGVAPEDGLPVGVQILAPARGDVT 475 Query: 473 LFSVGQIIEKE 483 ++ V +E + Sbjct: 476 MYEVAARMEAQ 486 >gi|126439126|ref|YP_001057225.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 668] gi|166217653|sp|A3N4F4|GATA_BURP6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|126218619|gb|ABN82125.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 668] Length = 496 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 217/493 (44%), Positives = 311/493 (63%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ANGEAGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + SSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDTSAVPGG-----SSGGSSAAVAAGLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|53717830|ref|YP_106816.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei K96243] gi|76809892|ref|YP_331782.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 1710b] gi|126455152|ref|YP_001064466.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 1106a] gi|134284062|ref|ZP_01770756.1| glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 305] gi|167822202|ref|ZP_02453673.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 9] gi|167843796|ref|ZP_02469304.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei B7210] gi|167900790|ref|ZP_02487995.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei NCTC 13177] gi|167909014|ref|ZP_02496105.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 112] gi|217424989|ref|ZP_03456485.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 576] gi|226194640|ref|ZP_03790235.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei Pakistan 9] gi|237810363|ref|YP_002894814.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Burkholderia pseudomallei MSHR346] gi|242314853|ref|ZP_04813869.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1106b] gi|254188159|ref|ZP_04894671.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei Pasteur 52237] gi|254196681|ref|ZP_04903105.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei S13] gi|254259939|ref|ZP_04950993.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1710a] gi|254295728|ref|ZP_04963185.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 406e] gi|81608159|sp|Q63YJ9|GATA_BURPS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109829643|sp|Q3JXC1|GATA_BURP1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217652|sp|A3NQ45|GATA_BURP0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|52208244|emb|CAH34175.1| glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei K96243] gi|76579345|gb|ABA48820.1| glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 1710b] gi|126228794|gb|ABN92334.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1106a] gi|134244514|gb|EBA44618.1| glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 305] gi|157805819|gb|EDO82989.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 406e] gi|157935839|gb|EDO91509.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei Pasteur 52237] gi|169653424|gb|EDS86117.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei S13] gi|217392009|gb|EEC32035.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 576] gi|225933341|gb|EEH29333.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei Pakistan 9] gi|237502723|gb|ACQ95041.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Burkholderia pseudomallei MSHR346] gi|242138092|gb|EES24494.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1106b] gi|254218628|gb|EET08012.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1710a] Length = 496 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 217/493 (44%), Positives = 311/493 (63%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ANGEAGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + SSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDTSAVPGG-----SSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|219856403|ref|YP_002473525.1| hypothetical protein CKR_3060 [Clostridium kluyveri NBRC 12016] gi|254790389|sp|B9DWL8|GATA_CLOK1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219570127|dbj|BAH08111.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 494 Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 203/483 (42%), Positives = 307/483 (63%), Gaps = 13/483 (2%) Query: 4 LNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +N+M ++ + +D +++++IS E+ +Y+ ++ + ++ AY+ V ++ A+E DK Sbjct: 1 MNYMTITAHKLKDMIKNREISVEEIARTYLDRVDEVDGKLGAYLYVASEGLLQKAKELDK 60 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+ L GIPI +KD + + + S +L G+ Y++ V +K+ + +++G Sbjct: 61 KISRGEILGKLFGIPISVKDNISVENMQNTCASRMLTGYISPYDAHVVEKIKFHQGIIIG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S +PW PGGSSGGS+ +VA A SIGTDT Sbjct: 121 KTNMDEFAMGSSTENSSIKLSRNPWDL-----NRVPGGSSGGSAISVAAGEAALSIGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G VG+KPTYGR SR G ++F +LDQ G I V D A+L + I+G D+ Sbjct: 176 GGSIRQPASFCGVVGLKPTYGRISRYGAVAFGSTLDQIGTIAADVEDCALLTECISGMDK 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T ++ VP Y ++L + I+GM +GIPKEY + L+ + K+ ++ I LK+ GA+I Sbjct: 236 RDFTTADMEVPKYSKSLSKDIKGMRIGIPKEYFGEGLNDKVRKSVEEAILVLKENGAQIK 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E S+P ++YAL AYYII+ AEASSNLAR+DG+RYG R + KD +++Y +RS G G EV Sbjct: 296 ECSIPLSEYALAAYYIIASAEASSNLARFDGIRYGYRSKNFKDAVDIYFKSRSEGLGSEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GTYVLS YD +Y +A K+R LI+ F + ++ I++PT PT+AF + + Sbjct: 356 KRRIVLGTYVLSEGYYDDYYKKALKVRKLIRNQFEDIMKE-FHAIISPTCPTTAFKI--D 412 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E M +D++TV N+ G+PAIS+P + + +P+GLQ++ FRE LF+V Sbjct: 413 EKKEDVMAMYLSDIYTVPANITGIPAISIPCGMVD-GLPVGLQIMSGYFRENILFNVAYS 471 Query: 480 IEK 482 E+ Sbjct: 472 FEQ 474 >gi|223934114|ref|ZP_03626060.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus suis 89/1591] gi|302023380|ref|ZP_07248591.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus suis 05HAS68] gi|223897223|gb|EEF63638.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus suis 89/1591] Length = 488 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 209/486 (43%), Positives = 303/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISA+EL + ++ I++ ++A++ + A A A D++ Sbjct: 3 FNNKTIDELHDLLVKKEISALELTKATLEDIKSREGAVDAFLTITEDAALAQAAALDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + + +++GK N Sbjct: 63 IDAD-NVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVSQAYAKDMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG SNE S + P + W D T PGGSSGGS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSNENSAFKPTKNAW---DQTK--VPGGSSGGSAAAVAAGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL I+G+D DA Sbjct: 177 IRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGHDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + D+ + Q I+GM + +PKEY + + P + +T + L+ GA I E+S Sbjct: 237 TSTINEIADFTSKIGQDIKGMKIALPKEYMGEGIDPQVKETILKAAKHLESLGAIIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y TRS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDATNLEEIYVKTRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+++ +A ++RTLI +DF + F D+IL PT PT AF G + N Sbjct: 357 IMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP +S+PA E +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGLSIPAGFVE-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|115353214|ref|YP_775053.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia ambifaria AMMD] gi|122321946|sp|Q0BAV4|GATA_BURCM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|115283202|gb|ABI88719.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Burkholderia ambifaria AMMD] Length = 496 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 215/495 (43%), Positives = 309/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIDAAR-DLNAFVHVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 GGALTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A++G+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY D L+ + + + + GA Sbjct: 239 REDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGDGLADDVRASIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT A+ L Sbjct: 359 PEVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP---AALCEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP A K P+GLQ+IG F E + Sbjct: 418 GSKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGASANAKRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|319761102|ref|YP_004125039.1| glutamyl-tRNA(gln) amidotransferase, a subunit [Alicycliphilus denitrificans BC] gi|317115663|gb|ADU98151.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Alicycliphilus denitrificans BC] Length = 496 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 216/489 (44%), Positives = 302/489 (61%), Gaps = 20/489 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ M V++ LR +SAVE ++ A S+ + AY+ + A A D I Sbjct: 6 LHDMGVAQLAAALRGGQVSAVEAAQHFL-ARAKSHQHLGAYVALNEDATLAQARAQDASI 64 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G A L G+PI KD F T+ T A S +L G+R +++TV +L + G V LGKLN Sbjct: 65 AAGTAAPLAGVPIAHKDIFVTRDFPTTAASRMLAGYRSPFDATVVARLAEAGCVTLGKLN 124 Query: 124 MDEFAMGSSNETSYYGPV--------ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 DEFAMG +NE S PV +PW PGGSSGGS+AAVA L A Sbjct: 125 CDEFAMGGTNENSAVAPVGFDAPRPVRNPWDGAR-----VPGGSSGGSAAAVAARLAPAV 179 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL A+ Sbjct: 180 TGTDTGGSIRQPASFCGVTGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAM 239 Query: 236 AGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 G D + D+T ++ P D+ RAL S++G+ +G+P E+ + L+ + + + Sbjct: 240 CGPDPDRDSTSLDRPAEDFGRALGDSLEGLRIGVPAEFFGEGLAADVHAAVDAALKEYEK 299 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GA++V I+LP T ++P YYI++PAEASSNL+R+DGVRYG R + D+L+MY+ TR+ Sbjct: 300 LGARLVPITLPRTDLSVPVYYILAPAEASSNLSRFDGVRYGYRAKDYADLLDMYKKTRAQ 359 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIMIGTYVLS YD++YL+A+K+R +I DF AF++ D+I P PT+A Sbjct: 360 GFGDEVKRRIMIGTYVLSEGYYDAYYLQAQKLRRMIADDFQAAFKE-CDLIAGPVAPTTA 418 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + LG + + + + D++T+ ++AGLP +SVPA E +P+GLQLIG F+E L Sbjct: 419 WRLGSQND---PVANYLADIYTLPASLAGLPGMSVPAGFGESGLPVGLQLIGNYFQEARL 475 Query: 474 FSVGQIIEK 482 + +++ Sbjct: 476 LNAAHRLQQ 484 >gi|52841963|ref|YP_095762.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81603310|sp|Q5ZUQ7|GATA_LEGPH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|52629074|gb|AAU27815.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 483 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 206/479 (43%), Positives = 303/479 (63%), Gaps = 18/479 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +++ S+VEL I I+ SN +NA+I + +A A+ +D + +G+ + L GIP Sbjct: 13 LHNREFSSVELTQHCINKIQ-SNKDLNAFISLDEDQALKEAQSADLVLKSGEGKPLTGIP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F TK ++T S +L F+ Y++T+ K NGA+++GK NMDEFAMGSSNE Sbjct: 72 MALKDLFCTKRLNTTCASKMLANFQAPYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNEN 131 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G V +PW + GGSSGGS+AAVAG L +IG+DTGGSIRQPA+F G G Sbjct: 132 SYFGSVKNPWDR-----ERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISG 186 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+++FA SLDQAG ++ D A++L +AG+D D+T V+ +PDY Sbjct: 187 IKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGFDSKDSTSVDRVIPDYSA 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + + +G+P + + I + ++ GA+I+EI L +P YY Sbjct: 247 EIKNPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLWVPCYY 306 Query: 316 IISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ AEASSNL+RYDG+R+G R + ++E+ N+RS GFG EVK RI+ GT+VLSS Sbjct: 307 VIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVLSSGF 366 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D++YL A+K+R LI+ + VDVIL PTTPT+AF LG++ ++ + + DVF Sbjct: 367 FDAYYLHAQKVRRLIRDELITTL-NSVDVILGPTTPTTAFKLGEKIDD--PIQNYLADVF 423 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 TVA N+AGLPA+S+P E K+P+GLQL+ + F E L ++ A +++ H W Sbjct: 424 TVAANLAGLPAVSIPTGF-ENKLPIGLQLMSKHFSENRLLAI-------AHHYQQHTNW 474 >gi|302771097|ref|XP_002968967.1| hypothetical protein SELMODRAFT_440512 [Selaginella moellendorffii] gi|300163472|gb|EFJ30083.1| hypothetical protein SELMODRAFT_440512 [Selaginella moellendorffii] Length = 979 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 216/475 (45%), Positives = 305/475 (64%), Gaps = 20/475 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD- 67 +S + +LR K+ISAVE+V Y+ + + +++ + + A A E D R+ GD Sbjct: 24 ISRLQTQLRKKEISAVEIVTEYLDRLREKEPDVKSFLHI-SSSALDEAAEIDGRLARGDD 82 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI IKD T+G+ + S ILDG+RP Y++T ++L ++GAV++GK N+DEF Sbjct: 83 PGPLAGIPIAIKDNLCTQGMPSTGGSRILDGYRPPYDATAVKRLKESGAVLIGKTNLDEF 142 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 MGSS E+S Y +PW D + PGGSSGGS+AAVA CA ++G+DTGGSIRQP Sbjct: 143 GMGSSTESSAYQVTSNPW---DLSR--VPGGSSGGSAAAVAAGQCACALGSDTGGSIRQP 197 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G VG+KPTYGR SR G++++A SLD G + +V D ++LL AIAG+D DAT + Sbjct: 198 ASFCGVVGLKPTYGRVSRFGLMAYASSLDVVGCLGTSVDDVSLLLNAIAGHDPADATSSS 257 Query: 248 LPVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 VP+Y +AL + GM GI KE + + P + + + + L+ GA + Sbjct: 258 KVVPNYLKALVPAKELPGNPLAGMKFGIIKETIGEGVEPAVAQVVKNAVVHLEKLGAVVQ 317 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLP LPAYY+++ +EASSNL+RYDG+RYG RV ++ MY +R GFG EVK Sbjct: 318 EVSLPTFSLGLPAYYVLAASEASSNLSRYDGIRYGPRVVADELNAMYGASRGQGFGAEVK 377 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY LS+ YD+ Y RA+++RTLI++DF +A E G ++L+P P+ AF +G++ Sbjct: 378 RRILMGTYALSAGYYDAFYKRAQQVRTLIQQDFKKALEDG-HILLSPVAPSPAFKIGEKV 436 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREET 472 + SM D+ TV VNMAGLPA+S+P L E K+P+GLQLIG F E T Sbjct: 437 LDPLSM--YLGDLMTVNVNMAGLPALSLPCGLIEDEGSKLPVGLQLIGNAFEEAT 489 >gi|221214689|ref|ZP_03587659.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD1] gi|221165579|gb|EED98055.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD1] Length = 496 Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 215/499 (43%), Positives = 309/499 (61%), Gaps = 23/499 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V + A A+ +D + Sbjct: 1 MHAKSLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVHVEPELTLAQAKAADAEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ARGAGGPLTGLPIAHKDVFVTRGWRSTAGSKMLADYESPFDATVVARLQAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + D+ R L Q + G+ +G+P EY D L+ + + + Sbjct: 235 TSLERDDEDFARHLGQPWAPGNDAAKPLAGLRIGLPNEYFGDGLADDVRAAIDAALKQYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ LG + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFN 471 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + V ++ + + Sbjct: 472 EARMLQVADAFQRATDWHK 490 >gi|189054472|dbj|BAG37245.1| unnamed protein product [Homo sapiens] Length = 528 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 201/493 (40%), Positives = 293/493 (59%), Gaps = 27/493 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFLCAASIGTD 179 +GPV +PW + K P + S + F C A++G+D Sbjct: 132 DGVFGPVKNPWSYSKQYREKRKQNPHSENEDSDWLITGGSSGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L A+AG D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVNDAAIVLGALAGPD 251 Query: 240 ECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ P+ P +L + + +GIPKEY + LS + W + + GA Sbjct: 252 PRDSTTVHEPISKPFMLPSL-ADVSKLCIGIPKEYLVPELSSEVQSLWSKAADLFESEGA 310 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFG 356 K++E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 KVIEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDIDVSTEAMYAATRREGFN 370 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 V+ RI+ G + L Y++++++A+K+R LI DF AF GVDV+LTPTT + A P Sbjct: 371 DVVRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPY 430 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L Sbjct: 431 LEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQL 487 Query: 474 FSVGQIIEKEAGY 486 +V + EK+ + Sbjct: 488 LTVAKWFEKQVQF 500 >gi|163815777|ref|ZP_02207148.1| hypothetical protein COPEUT_01957 [Coprococcus eutactus ATCC 27759] gi|158448918|gb|EDP25913.1| hypothetical protein COPEUT_01957 [Coprococcus eutactus ATCC 27759] Length = 487 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 213/487 (43%), Positives = 297/487 (60%), Gaps = 10/487 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E ++ +S V+ + + +IE N+++ V + A A AEE K+I G Sbjct: 3 MTAVELGKAIKDGQVSVVQATQACLDSIEACEKDYNSFVTVDREGALAQAEEVQKKIDAG 62 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + + L G+PI IKD G+ T S IL F P Y + KL + GAV++G NMD Sbjct: 63 ELSGPLAGVPIAIKDNMCQAGVQTSCSSKILSNFVPTYTAEAVVKLQEAGAVIVGHTNMD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ ETSY+G +PW PGGSSGGS+AAVAG ++G+DTGGSIR Sbjct: 123 EFAMGSTTETSYFGETRNPWDI-----NRVPGGSSGGSAAAVAGEEVPCALGSDTGGSIR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G GIKPTYGR SR G+I++ SLDQ G + + V D A +L+ I+ YD+ D+T Sbjct: 178 QPASFCGVTGIKPTYGRVSRYGLIAYGSSLDQIGPLAKNVEDCATILEVISQYDKKDSTS 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VN D+ AL ++G+ +G+P++Y + L P I + LK GA + E L Sbjct: 238 VNRDDNDFTSALVDDVKGLKIGLPRDYFTEGLEPEIKEAVYGVAEALKAKGAIVEEFDLG 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +YA+PAYYII+ AEASSNL R+DGV+YG R E D+ MY+ +RS GFG EVK RIM Sbjct: 298 MVEYAIPAYYIIASAEASSNLERFDGVKYGYRTSEYTDLHNMYKKSRSEGFGPEVKRRIM 357 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G++VLSS YD++Y++A K + LIK+ + +AFE+ D+IL P PT+A +G E+ S Sbjct: 358 LGSFVLSSGYYDAYYVKALKAKALIKQAYDKAFEK-YDIILGPVAPTTALKMG--ESLSD 414 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + DV+TV VN+AGLP IS+P + MP+G+Q++G F E+T+ EK Sbjct: 415 PIKMYLGDVYTVPVNLAGLPGISLPCGTDKDGMPIGVQMVGNAFEEKTIIRAAYAFEKTR 474 Query: 485 GYFRPHK 491 Y RP + Sbjct: 475 EYKRPAQ 481 >gi|258651693|ref|YP_003200849.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Nakamurella multipartita DSM 44233] gi|258554918|gb|ACV77860.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nakamurella multipartita DSM 44233] Length = 519 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 216/499 (43%), Positives = 311/499 (62%), Gaps = 32/499 (6%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA----- 68 D + S ++S+ E+ +++ I + ++A++ V + A A A+ D+ I GD Sbjct: 15 DMIASGEVSSREVTQAHLDRIAAVDGSVHAFLHVSGELALAQADAVDRAIAAGDGPGAGA 74 Query: 69 ---------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 L G+P+ +KD +G+ T A S IL+G+RP Y++TVT +L D G V+L Sbjct: 75 GVGAAGAPLSPLAGVPLALKDIVVQRGVPTTAGSKILEGWRPPYDATVTTRLLDAGVVIL 134 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S YGP +PW PGGS GGS+AA+A F +IGTD Sbjct: 135 GKTNLDEFAMGSSTENSAYGPTRNPWDL-----SRIPGGSGGGSAAALAAFEAPLAIGTD 189 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D Sbjct: 190 TGGSIRQPAAVTGTVGTKPTYGGVSRYGLIALASSLDQVGPCARTVLDTALLHEVIAGHD 249 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PVP +A+ + I G+ VG+ K+ R + P + ++ ++ L A Sbjct: 250 PRDSTSIPSPVPSVVQAVRRGQTDGIAGLRVGVVKQLRGEGYQPGVLASFDAAVATLTAA 309 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL---EMYENTRS 352 GA+IVE+ PH QYAL AYY+I P+E SSNLAR+D +RYGLRV I E+ TR Sbjct: 310 GAEIVEVDCPHFQYALAAYYLILPSECSSNLARFDAMRYGLRVGDNGIASAEEVMSKTRG 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LS+ +D++Y A+K+RTLI+RDF AF Q DV+++P++P + Sbjct: 370 QGFGAEVKRRIILGTYALSAGYFDAYYGSAQKVRTLIRRDFENAF-QSADVLISPSSPVT 428 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 AFP+G++ N+ M ND+ T+ ++AG+PA+SVP+ + + +P+GLQ++G EE Sbjct: 429 AFPIGEKVND--PMAMYLNDLATIPGSLAGIPAMSVPSGIATDTGLPVGLQIMGPALGEE 486 Query: 472 TLFSVGQIIEKEAGYFRPH 490 ++ V E+ Y H Sbjct: 487 QIYRVAAAF--ESAYLAEH 503 >gi|330822960|ref|YP_004386263.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Alicycliphilus denitrificans K601] gi|329308332|gb|AEB82747.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Alicycliphilus denitrificans K601] Length = 496 Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 216/489 (44%), Positives = 302/489 (61%), Gaps = 20/489 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ M V++ LR +SAVE ++ A S+ + AY+ + A A D I Sbjct: 6 LHDMGVAQLAAALRGGQVSAVEAAQHFL-ARAKSHQHLGAYVALNEDATLAQARAQDASI 64 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G A L G+PI KD F T+ T A S +L G+R +++TV +L + G V LGKLN Sbjct: 65 AAGTAAPLAGVPIAHKDIFVTRDFPTTAASRMLAGYRSPFDATVVARLAEAGCVTLGKLN 124 Query: 124 MDEFAMGSSNETSYYGPV--------ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 DEFAMG +NE S PV +PW PGGSSGGS+AAVA L A Sbjct: 125 CDEFAMGGTNENSAVAPVGFDAPRPVRNPWDGAR-----VPGGSSGGSAAAVAARLAPAV 179 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL A+ Sbjct: 180 TGTDTGGSIRQPASFCGVTGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAM 239 Query: 236 AGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 G D + D+T ++ P D+ RAL S++G+ +G+P E+ + L+ + + + Sbjct: 240 CGPDPDRDSTSLDRPAEDFGRALGDSLEGLRIGVPAEFFGEGLAADVHAAVDAALKEYEK 299 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GA++V I+LP T ++P YYI++PAEASSNL+R+DGVRYG R + D+L+MY+ TR+ Sbjct: 300 LGARLVPITLPRTDLSVPVYYILAPAEASSNLSRFDGVRYGYRAKDYADLLDMYKKTRAQ 359 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIMIGTYVLS YD++YL+A+K+R +I DF AF++ D+I P PT+A Sbjct: 360 GFGDEVKRRIMIGTYVLSEGYYDAYYLQAQKLRRMIADDFQAAFKE-CDLIAGPVAPTTA 418 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + LG + + + + D++T+ ++AGLP +SVPA E +P+GLQLIG F+E L Sbjct: 419 WRLGSQND---PVANYLADIYTLPASLAGLPGMSVPAGFGEGGLPVGLQLIGNYFQEARL 475 Query: 474 FSVGQIIEK 482 + +++ Sbjct: 476 LNAAHRLQQ 484 >gi|312278941|gb|ADQ63598.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus thermophilus ND03] Length = 488 Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 207/486 (42%), Positives = 293/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + I I+ +NA++ V + A A A+ D++ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATIDDIKAREEAVNAFVTVAEEAALAQAKAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-LSGIPFAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGSTKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+ M + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKSMKIALPKEYLGEGIDPEVKETILDAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|258404438|ref|YP_003197180.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfohalobium retbaense DSM 5692] gi|257796665|gb|ACV67602.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfohalobium retbaense DSM 5692] Length = 489 Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 211/477 (44%), Positives = 302/477 (63%), Gaps = 13/477 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 RD LR DISA V++ + I + + A + A+ A A D + + D L Sbjct: 10 RDALRCGDISAENAVNTCLDRIRTTEPVVQALVHTDAENALNTARSLDAQGPSADM-PLW 68 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI +KD ATKG T CS +L+ F P Y + V +L GA++L K NMDEFAMGSS Sbjct: 69 GVPIILKDLLATKGQPTTCCSKMLENFTPFYNAHVVDRLQQAGAIVLAKSNMDEFAMGSS 128 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S +PW D+T GSSGGS+AAVA ++GTDTGGSIRQPA F G Sbjct: 129 TENSAVQQTKNPW---DTTRVPG--GSSGGSAAAVAAGQAPGALGTDTGGSIRQPAGFCG 183 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G++++ SLDQ G +TR V DSA +L+AIAG+D D+T V + VPD Sbjct: 184 IVGLKPTYGRVSRYGLVAYGSSLDQIGPMTRCVADSAAILQAIAGHDPKDSTSVAIEVPD 243 Query: 253 YERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y AL+Q+ + G +G+P+EY D LS + +T + + ++ GA++V++SLPHT+YA Sbjct: 244 YTAALEQTTDLSGWRIGVPREYWGDGLSDEVAETCRAFLDQAREHGAELVDVSLPHTKYA 303 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + YYI+ AEASSNL+R+DGVRYG R + +++EMY +RS GFG+EV+ RI++GTY Sbjct: 304 IATYYILVMAEASSNLSRFDGVRYGHRADDAANLMEMYSKSRSQGFGREVQRRILLGTYA 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ YD++Y +A ++R LI+ D+ +AF D++ P PT+AF LG++ ++ M Sbjct: 364 LSAGYYDAYYKKAAQVRRLIRDDYLQAFAS-CDLLCGPVAPTTAFGLGEKTDDPLQM--Y 420 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 D+FT +N+ GLP +S+PA + +P+G+QL G F E L G ++E+ G Sbjct: 421 LTDIFTNPLNLTGLPGLSLPAGIGRTSGLPVGVQLFGPAFGESALLQAGHVLEQARG 477 >gi|271969276|ref|YP_003343472.1| amidase [Streptosporangium roseum DSM 43021] gi|270512451|gb|ACZ90729.1| Amidase [Streptosporangium roseum DSM 43021] Length = 496 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 219/470 (46%), Positives = 301/470 (64%), Gaps = 16/470 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGI 78 ++SAVE+ +++ I Q+NA++ V A+ A D R G D L G+PI Sbjct: 19 EVSAVEVAQAHLDRIAAVEPQVNAFLHVDAETTLGQARAVDARRAAGEDLGPLAGVPIAH 78 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T + T A S IL+G+RP Y++TVT++L + G V+LGK N+DEFAMGSS E S Y Sbjct: 79 KDVFTTVDMPTTAGSKILEGYRPPYDATVTRRLREAGLVILGKTNLDEFAMGSSTENSAY 138 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW PGGSSGGSSAAVA + S GTDTGGSIRQPA+ TG VG+KP Sbjct: 139 GPTRNPWDL-----SRIPGGSSGGSSAAVAAYEAPLSTGTDTGGSIRQPAAVTGIVGMKP 193 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD-YERAL 257 TYG SR G+I+FA SLD G R V D+A+L +A +G+D D+T ++ PVP E A Sbjct: 194 TYGGSSRYGLIAFASSLDTPGPFARNVMDAALLHEAFSGHDAMDSTSIDAPVPSVVEAAR 253 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + G+ +G+ KE+ D + + + + L+ GAK+VE+S P ALPAYY+I Sbjct: 254 NGDVAGLRIGVVKEFGGDGYQAGVLARFHETVELLESLGAKVVEVSCPSFSTALPAYYLI 313 Query: 318 SPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +P+EASSNLAR+D +RYGLRV G D E+ TR+ GFG EVK RI++GTY LSS Sbjct: 314 APSEASSNLARFDAMRYGLRV-GDDGTRSAEEVMALTRAAGFGPEVKRRIILGTYALSSG 372 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A+K+RTLI RDF AF Q VDV+++PTTPT+AFP+G+ ++ M D+ Sbjct: 373 YYDAYYGQAQKVRTLIARDFEAAFHQ-VDVLVSPTTPTTAFPIGERADD--PMAMYLADL 429 Query: 434 FTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+ N+AG AISVP L E +P+GLQ++ ++ + VG +E+ Sbjct: 430 CTIPTNLAGNAAISVPCGLADEDGLPVGLQVMAPVLGDDRCYRVGAAVER 479 >gi|167892295|ref|ZP_02479697.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 7894] gi|167917052|ref|ZP_02504143.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei BCC215] Length = 496 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 217/493 (44%), Positives = 311/493 (63%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ANGEAGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + SSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDTSAVPGG-----SSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 VLGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|225026152|ref|ZP_03715344.1| hypothetical protein EUBHAL_00393 [Eubacterium hallii DSM 3353] gi|224956532|gb|EEG37741.1| hypothetical protein EUBHAL_00393 [Eubacterium hallii DSM 3353] Length = 491 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 211/485 (43%), Positives = 305/485 (62%), Gaps = 12/485 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEES 59 M +++ AV E ++++ ++S +E ++ + AI+ + N Y+ V + A +A AEE Sbjct: 1 MGLMDYTAV-ELGKKIKAGEVSVLEAANAAMDAIDALEDKFNCYVTVQERAAVQAKAEEL 59 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 K+I +G L G+P+ +KD TKG T S IL+ F P Y + L GA++ Sbjct: 60 QKKIDDGTLTGPLAGVPVAVKDNMCTKGTRTTCSSKILENFEPAYTAEAVLNLEKAGALI 119 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK NMDEFAMGS+ ETS+YG +PW + + PGGSSGGS+AAVA C+ ++G+ Sbjct: 120 IGKTNMDEFAMGSTTETSHYGVTKNPWNA-----EHVPGGSSGGSAAAVAAGECSYALGS 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPAS+ G VG+KPTYG SR G+I++ SLDQ G + + V D A +L+ IA + Sbjct: 175 DTGGSIRQPASYCGIVGMKPTYGTVSRYGLIAYGSSLDQIGPMAKDVTDCATILETIASH 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+T V D+ AL ++GM +GIP++Y + L + L++ GA Sbjct: 235 DPKDSTSVKREDYDFTSALTDDVKGMRIGIPRDYMGEGLDEEVKAAVLDAAKKLEEKGAI 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQ 357 + E L QYA+PAYY+I+ AEASSNLAR+DGV+YG R E + L MY+ TRS GFG Sbjct: 295 VEEFDLSLVQYAIPAYYVIASAEASSNLARFDGVKYGYRTESYEGLHNMYKKTRSEGFGP 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+G++VLSS YD++YL+A + + LIK+ F +AF + DVIL P PT+A LG Sbjct: 355 EVKRRIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDKAFAK-YDVILGPAAPTTAPKLG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E+ S + D++T++VN+AGLP ISVP +L K +P+G+Q IG F+E+ + Sbjct: 414 --ESLSDPIKMYLGDIYTISVNLAGLPGISVPGSLDSKGLPIGIQFIGDCFKEKNIIRAA 471 Query: 478 QIIEK 482 E+ Sbjct: 472 YAFEQ 476 >gi|325123301|gb|ADY82824.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter calcoaceticus PHEA-2] Length = 492 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 221/479 (46%), Positives = 314/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I + + +Y+ V ++A A A+ +D Sbjct: 1 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPLVKSYVTVTPEQALAEADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+A L GIP+ KD F TKGI T A S ILD F Y++TV +K G V LG Sbjct: 61 AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKILDNFISPYDATVVEKTKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E+SY G +PW ++D PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSESSYVGATSNPW-ALD----HVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KPTYGR SR GII++A SLDQAG + R+ D A L+ IAG+D Sbjct: 176 GGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDA 235 Query: 241 CDATCVNLPVPDYERALDQS-IQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ + ++G+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVKKEVDDYVANLNGTPVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGP 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFEN-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L S+ Sbjct: 415 A---NLSPTEMYLGDIYTLAVNLAGLPAINAPVGFDKDSLPVGLQLIGNYWSESQLLSI 470 >gi|307706083|ref|ZP_07642902.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus mitis SK321] gi|307618483|gb|EFN97631.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus mitis SK321] Length = 488 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 299/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ + +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIQSRETAINAFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NALSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVSNAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|167747870|ref|ZP_02419997.1| hypothetical protein ANACAC_02599 [Anaerostipes caccae DSM 14662] gi|167652692|gb|EDR96821.1| hypothetical protein ANACAC_02599 [Anaerostipes caccae DSM 14662] Length = 490 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 210/492 (42%), Positives = 303/492 (61%), Gaps = 11/492 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L+ A+ R ++++K+I++VE V + ++ I + ++AY+ + A AEE Sbjct: 1 MGILDLTALELGR-KIKAKEITSVEAVQAVLEQIRKTEPAVHAYVSYDEESALKRAEEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K+I +G L G+P+ +KD TKG T S IL+ F P Y + + L G V++ Sbjct: 60 KQIDDGTLTGPLAGVPMAVKDNICTKGYKTTCSSRILENFVPTYAAQAVENLIAAGVVII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +GP +PW + PGGSSGGS+AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGPTKNPWNQ-----EHVPGGSSGGSAAAVAAGECFMALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G G+KPTYG SR G+I++ SLDQ G + + V D A LL+ +A YD Sbjct: 175 TGGSIRQPASFCGITGMKPTYGTISRYGLIAYGSSLDQIGPMAKDVSDCAALLETVASYD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D+T + D+ AL ++GM +GIPK+Y + L + + L++ GA I Sbjct: 235 KKDSTSIERDEYDFTSALVDDVKGMKIGIPKDYFGEGLDSEVREAVMNAARTLEEKGAVI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E L YA+PAYY+I+ AEASSNL+R+DG++YG R +G + L MY+ TRS GFG E Sbjct: 295 EEFDLGLVDYAIPAYYVIAAAEASSNLSRFDGIKYGYRAKGAEGLHAMYKKTRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A + + LIK++F +AF D+IL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRTKALIKQEFDKAFAS-YDLILGPAAPTTAPKLG- 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ S + D++T++ N+AGLP ISVP K +P+GLQL+G F+E+ L Sbjct: 413 -DSLSDPIKMYLGDIYTISANLAGLPGISVPCGKDSKGLPIGLQLLGDCFQEKKLIRAAY 471 Query: 479 IIEKEAGYFRPH 490 E+ Y P Sbjct: 472 AFEQTRSYEAPE 483 >gi|254251093|ref|ZP_04944411.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia dolosa AUO158] gi|124893702|gb|EAY67582.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia dolosa AUO158] Length = 496 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 214/499 (42%), Positives = 310/499 (62%), Gaps = 23/499 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A+ +D + Sbjct: 1 MHAKSLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVHVEPDLTLAQAKAADAEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ARGAGGPLTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW + + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGAVKNPWDT-----RAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + D+ R L Q + G+ +G+P EY D L+ + + + Sbjct: 235 TSLERDDEDFTRHLGQPWAPGNDAAKPLAGLRIGLPNEYFGDGLADDVRAAIDAALKQYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ LG + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F Sbjct: 414 AWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + V ++ + + Sbjct: 472 EARMLQVADAFQRATDWHK 490 >gi|218132402|ref|ZP_03461206.1| hypothetical protein BACPEC_00261 [Bacteroides pectinophilus ATCC 43243] gi|217992740|gb|EEC58742.1| hypothetical protein BACPEC_00261 [Bacteroides pectinophilus ATCC 43243] Length = 479 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 207/481 (43%), Positives = 300/481 (62%), Gaps = 11/481 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ AV R ++++K+++ E V + I+ +++N Y+ + A A A+E +I Sbjct: 1 MSLTAVELGR-KIKAKEVTVREAVLAAYDKIDEKEAELNCYVTTTKEAALAKADEVQAKI 59 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L G+P+ IKD TKG+ T S IL+ F P + + L GAV+LGK Sbjct: 60 DAGELTGPLAGVPVAIKDNMCTKGVLTTCGSRILENFVPTFTAEAVINLEKAGAVILGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGS+ ETS+YG +PW + K PGGSSGGS+AAVA C+ ++G+DTGG Sbjct: 120 NMDEFAMGSTTETSHYGATKNPWNT-----KHVPGGSSGGSAAAVAADECSFALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQP+S+ G G+KPTYG SR G+I++ SLDQ G I + V D A +L+ IA YD D Sbjct: 175 SIRQPSSYCGVTGMKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCAAILETIASYDPKD 234 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T + D+ AL ++GM +GIPK+Y ++ L+P + L++ GA + E Sbjct: 235 STSIRRDDYDFTSALVDDVKGMKIGIPKDYLIEGLNPEVKAAIMNAAHKLEEKGAVVEEF 294 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 L +YA+PAYY+I+ AEASSNLAR+DGV+YG R E ++ EMY+ TRS GFG EVK Sbjct: 295 DLSLVEYAIPAYYVIACAEASSNLARFDGVKYGYRTPEYNELHEMYKKTRSEGFGPEVKR 354 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+G++VLSS YD++YL+A + + LIK+ F +AF + DVIL P PT+A +G Sbjct: 355 RIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDKAFSK-YDVILGPVAPTTAPEIGSSLA 413 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M D++T++VN+AGLP ISVP K +P+G+Q+IG F E+ + E Sbjct: 414 DPIKM--YLGDIYTISVNLAGLPGISVPGGFDSKGLPIGVQMIGNCFEEKKIIRTAYAFE 471 Query: 482 K 482 + Sbjct: 472 Q 472 >gi|124002668|ref|ZP_01687520.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microscilla marina ATCC 23134] gi|123991896|gb|EAY31283.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microscilla marina ATCC 23134] Length = 467 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 189/469 (40%), Positives = 281/469 (59%), Gaps = 10/469 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + L+ ++ +LV+ Y++ I+ + +NA++E + +AR A+ D++I A L Sbjct: 5 QQELQGGSLTCSQLVEHYLENIDK-KADLNAFLETYSDEARQQAQVVDQKIAENRAGKLA 63 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+ IGIKD + Q S ILDGF + +T Q+L + +++G+ N DEFAMGSS Sbjct: 64 GMVIGIKDVLCYQNHSLQCSSKILDGFESQFTATAVQRLLNEDVIIIGRQNCDEFAMGSS 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 NE S +G V + + PGGSSGGS+ AV +C S+G+DTGGS+RQPA+F G Sbjct: 124 NENSAFGVVRNA-----ANPAHVPGGSSGGSAVAVQADMCLVSLGSDTGGSVRQPAAFCG 178 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KP+YGR SR G+ ++A S D GI + + D A++L+ +AG DE D T VP+ Sbjct: 179 VVGLKPSYGRISRYGLAAYASSFDCIGIFGKNIADVALVLEIMAGADEFDTTVSKKSVPE 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 Y +AL + + + + L P + + Q + +LK G + + P Y LP Sbjct: 239 YSKALSFDRKAKVAYLKETLESEGLHPEVKQATQATLDFLKTEGHTVESVDFPLLDYILP 298 Query: 313 AYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YYI++ AEASSNL+RYDGVRYG R +D+ +MY TR+ GFG EVK RI++GTYVLS Sbjct: 299 TYYILTTAEASSNLSRYDGVRYGFRSTSAEDLQQMYTQTRTEGFGAEVKRRILLGTYVLS 358 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + YD++Y +A+K+R LIK + FEQ D I+ PTTP +AF +G +N M Sbjct: 359 ASYYDAYYTQAQKVRRLIKDATDKLFEQ-YDFIVLPTTPNTAFEVGAHNDNLVEM--YLE 415 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 D+FTV N+ G+PAIS+P +P+GLQ++ ++E+ L S Q + Sbjct: 416 DLFTVQANVVGVPAISIPNGRATNGLPIGLQVMAATYQEDDLLSFSQYL 464 >gi|313827589|gb|EFS65303.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL063PA2] Length = 501 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 213/488 (43%), Positives = 306/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TK I T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKEIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 +VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 VVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 G E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 QG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|172062086|ref|YP_001809738.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia ambifaria MC40-6] gi|229485859|sp|B1YPV8|GATA_BURA4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|171994603|gb|ACB65522.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia ambifaria MC40-6] Length = 496 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 214/495 (43%), Positives = 308/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIDAAR-DLNAFVHVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 GGALTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A++G+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY D L+ + + + + GA Sbjct: 239 REDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGDGLADDVRASIDAALKAYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT A+ L Sbjct: 359 PEVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F E + Sbjct: 418 GAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|206558886|ref|YP_002229646.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia cenocepacia J2315] gi|229485861|sp|B4E7X6|GATA_BURCJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|198034923|emb|CAR50795.1| glutamyl-tRNA amidotransferase subunit A [Burkholderia cenocepacia J2315] Length = 496 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 215/495 (43%), Positives = 307/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAAR-DLNAFVHVDADLTLAQAKAADAELARGA 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 GGALTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+DE D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERDSTSLE 238 Query: 248 LPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ R L Q + G+ +G+P EY L+ + T + + GA Sbjct: 239 RDDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGAGLADDVRATIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTYVLS YD++YL+A+KIR +I DF EAF+ DVI+ P +PT A+ L Sbjct: 359 PEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIANDFQEAFKS-CDVIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 GAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|222831590|ref|NP_060762.3| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Homo sapiens] gi|114608701|ref|XP_518663.2| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog isoform 2 [Pan troglodytes] gi|167016573|sp|Q9H0R6|QRSL1_HUMAN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|7023375|dbj|BAA91941.1| unnamed protein product [Homo sapiens] gi|10435462|dbj|BAB14592.1| unnamed protein product [Homo sapiens] gi|13543878|gb|AAH06084.1| Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Homo sapiens] gi|15680110|gb|AAH14389.1| Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Homo sapiens] gi|55664377|emb|CAH72093.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Homo sapiens] gi|119568792|gb|EAW48407.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, isoform CRA_a [Homo sapiens] gi|325463343|gb|ADZ15442.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [synthetic construct] Length = 528 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 201/493 (40%), Positives = 293/493 (59%), Gaps = 27/493 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFLCAASIGTD 179 +GPV +PW + K P + S + F C A++G+D Sbjct: 132 DGVFGPVKNPWSYSKQYREKRKQNPHSENEDSDWLITGGSSGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L A+AG D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPD 251 Query: 240 ECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ P+ P +L + + +GIPKEY + LS + W + + GA Sbjct: 252 PRDSTTVHEPINKPFMLPSL-ADVSKLCIGIPKEYLVPELSSEVQSLWSKAADLFESEGA 310 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFG 356 K++E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 KVIEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDIDVSTEAMYAATRREGFN 370 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 V+ RI+ G + L Y++++++A+K+R LI DF AF GVDV+LTPTT + A P Sbjct: 371 DVVRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPY 430 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L Sbjct: 431 LEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQL 487 Query: 474 FSVGQIIEKEAGY 486 +V + EK+ + Sbjct: 488 LTVAKWFEKQVQF 500 >gi|331266949|ref|YP_004326579.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus oralis Uo5] gi|326683621|emb|CBZ01239.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus oralis Uo5] Length = 488 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 205/486 (42%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSREKAINAFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ IKD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAIKDNISTDGILTTAASKMLYNYEPIFDATAVANAKSKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILSAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRADDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSIAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|296453423|ref|YP_003660566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium longum subsp. longum JDM301] gi|296182854|gb|ADG99735.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium longum subsp. longum JDM301] Length = 513 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 209/479 (43%), Positives = 304/479 (63%), Gaps = 19/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E ++ D+++ ELV+++++ IE + + A+++V A A+ D + Sbjct: 11 LSAAEQAAAIKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAED 70 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 A +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +LGK N+ Sbjct: 71 KAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNL 130 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS E S Y +PW + + PGGS GGS++AVA F ++GTDTGGSI Sbjct: 131 DEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSASAVAAFEAPIALGTDTGGSI 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D+ D+T Sbjct: 186 RQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRDST 245 Query: 245 CV-NLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P P A + + ++GM VG+ KE D P ++ + + + LK+ GA++V Sbjct: 246 SIPEGPRPMVAAAREGAKRDLKGMKVGLIKELGGDGFQPGVEARFNEAVDKLKEMGAEVV 305 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGF 355 E+S+PH Y+L AYYII P+E SSNLARYDG+RYGLRV + M TR GF Sbjct: 306 EVSVPHIGYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYTREAGF 365 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ YD+ Y A+K+RTLI RDF AFE+ DV++ PT+P++AF Sbjct: 366 GDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFHNAFEK-ADVLVAPTSPSTAFK 424 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G++ ++ +M ND+ T+ N+AG+PA+S+PA L + +P+G Q I R+E ++ Sbjct: 425 FGEKMDDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY 481 >gi|225619959|ref|YP_002721216.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brachyspira hyodysenteriae WA1] gi|259647205|sp|C0R074|GATA_BRAHW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|225214778|gb|ACN83512.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brachyspira hyodysenteriae WA1] Length = 482 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 302/480 (62%), Gaps = 12/480 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEES 59 ELN + + + R++L++K+I A LVDS I+ IE N ++ AY+E+ ++A A+++ Sbjct: 2 ELNELTIIQIREKLKNKEIDAPTLVDSIIKNIEEDNKRDDKIYAYLEIFKEEALEQAKKA 61 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +RI NG+ L G+P+ IKD K A S +L+G++ Y + Q+L DNGA+++ Sbjct: 62 QERINNGEDLPLLGVPLAIKDNLCYKDHLMTASSKMLEGYKAPYTAPTVQRLIDNGAIII 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ NMDEFAMG + ETS YG +P PGGSSGGS+AAVA ++G+D Sbjct: 122 GRTNMDEFAMGGTTETSNYGVTRNPKNR-----AHVPGGSSGGSAAAVAANFAFGALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYGR RLG I+ A SLDQ G +T+ V+D+A++ K IAG+D Sbjct: 177 TGGSIRQPASFCGIVGVKPTYGRVPRLGCIAMASSLDQVGPLTKDVKDAALMTKIIAGFD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAK 298 ++T +N+PVPDY ALD +I+GM +G+ KE Y D ++ + + I LKD GA+ Sbjct: 237 PKESTTLNIPVPDYVAALDGNIKGMKIGLAKEYYDTDLIAADVKENVMDAIGKLKDQGAE 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 IV+ISLP+ +Y Y + E +SN+ RYDG+RYG +G ++ E Y +RS+G Sbjct: 297 IVDISLPNAKYGSRVYTAVMDVEVASNMGRYDGIRYGYHPKGDFNLDEYYYTSRSVGLAF 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E + RI+ GT + R + SHY A K+R L++ DF AF + VDVI++PT+P +A LG Sbjct: 357 ETRARILFGTLMTGKRFFYSHYQHALKVRKLMQMDFDNAF-KNVDVIVSPTSPVTAGLLG 415 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ + D + +N+ GLPA+SVP + + MP+G+Q I + F E +F + Sbjct: 416 TRDQTDSALSFL-ADSYVSNINLVGLPAMSVPCGVDKNNMPIGIQFITKQFNEVDMFRMA 474 >gi|326576195|gb|EGE26110.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis CO72] Length = 492 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 212/496 (42%), Positives = 306/496 (61%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV + I++ + Q+N++I A AE +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSQELVKHFASRIDSLDGQINSFITKDFDNALKHAELAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD T+G+ T A S IL F Y +TV + + + G V LG Sbjct: 61 KLRAEGDTRPLLGVPMAHKDNLCTQGVLTSAGSKILSNFVSPYNATVVENIANAGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW + PGGSSGGS+AA A + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPWDTAR-----VPGGSSGGSAAAAAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + GYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTFGKSALDCAYLLAPMTGYDP 235 Query: 241 CDATCVNLPVPDY------ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT ++ P DY + + + G +GI + Y L ++K+ + ++ ++ Sbjct: 236 KDATSISRPSEDYVADILATKTDGKPLAGKKIGIAQAYFGAGLDDEVEKSIRAALAKYEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GA+IVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAEIVEVDITDPAVTLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSE 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT+A Sbjct: 356 GFGAEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTAA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLIG+ + E Sbjct: 415 YKLGESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQA-NGLPVGLQLIGKHWAESE 469 Query: 473 LFSVGQIIEKEAGYFR 488 L I + + + Sbjct: 470 LLKTAHIYQSHTDFHQ 485 >gi|284039348|ref|YP_003389278.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Spirosoma linguale DSM 74] gi|283818641|gb|ADB40479.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Spirosoma linguale DSM 74] Length = 479 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 201/481 (41%), Positives = 296/481 (61%), Gaps = 35/481 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L + ++ +LV+ Y+ I+ N +NA+ EV A +AR AE D+++ G A L G+ Sbjct: 14 LSNGSLTCQQLVEQYLVRIDE-NRHLNAFTEVYATEARQQAEAIDQKLAAGTAGRLAGMV 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +GIKD + G +A S ILD F + +T Q+L D +++G+ N DEFAMGSSNE Sbjct: 73 VGIKDVLSYTGHGVRAGSKILDNFTAQFTATAVQRLLDEDVIIIGRQNCDEFAMGSSNEN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S +GPV++ + D++ PGGSSGGS+ AV LC ASIG+DTGGS+RQPA+F G VG Sbjct: 133 SSFGPVLN---AADTSR--VPGGSSGGSAVAVQAGLCLASIGSDTGGSVRQPAAFCGVVG 187 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR G+I++A S D G I TV D+A+LL+ +AG D D+T + PV Y + Sbjct: 188 LKPTYGRISRWGLIAYASSFDCIGPIANTVDDAALLLEIMAGPDAFDSTVSSQPVSAYSQ 247 Query: 256 ALDQSIQGMTVGIP-KEYRLDYL---------SPTIDKTWQQGISWLKDAGAKIVEISLP 305 A +P + R+ YL P+I + Q I L+ AG + + + Sbjct: 248 AT----------LPDRPLRIAYLRDGIESSGVDPSIREATQAKIDALRKAGHTVEPVDIS 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-----VEGKDILEMYENTRSIGFGQEVK 360 +Y LP YYI++ AEASSNL+R+DGVRYG R D+L +Y+ +R+ GFG EV+ Sbjct: 298 LIKYLLPTYYILTTAEASSNLSRFDGVRYGYRSLSNDTPALDLLSLYKKSRTEGFGAEVR 357 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GT+ LS+ YD++Y +A+++R LI+++ + FEQ D +L+PTTPT AF LG++ Sbjct: 358 KRILLGTFALSASYYDAYYTKAQQVRRLIRQEAEQLFEQ-YDFLLSPTTPTPAFRLGEKT 416 Query: 421 NNSGS---MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 S + + D+FTV N+ G PAIS+PA +P+G+QL+ PF EE L ++ Sbjct: 417 GGSANDDPLQMYLADIFTVQANVVGYPAISIPAGTDANGLPIGIQLMAPPFAEEALVALA 476 Query: 478 Q 478 + Sbjct: 477 R 477 >gi|294102356|ref|YP_003554214.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Aminobacterium colombiense DSM 12261] gi|293617336|gb|ADE57490.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Aminobacterium colombiense DSM 12261] Length = 489 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 215/468 (45%), Positives = 297/468 (63%), Gaps = 11/468 (2%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 SA E+ S + E Q++A + + + A A+ D+ + +G L G+P +K Sbjct: 20 FSASEVFLSCLARAEVLEPQISAMLTITEESGMAQAKAVDEAVASGKKLPPLAGVPFVVK 79 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D TKGI T S +L ++P Y +TV + L + GAV++GK N+DEFAMG + E S YG Sbjct: 80 DNMCTKGIPTTCASKMLMQWKPPYNATVIELLAEAGAVLMGKTNLDEFAMGGTTEHSVYG 139 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW+ +D PGGSSGGS+A+V+ S+G+DTGGSIRQPA+F G G KPT Sbjct: 140 ATSNPWK-LDCV----PGGSSGGSAASVSAGYVPFSLGSDTGGSIRQPAAFCGIYGFKPT 194 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD- 258 YG SR G+ +FA SLDQ G RTV D A++L AI+ DE D+TC P PDY +AL+ Sbjct: 195 YGLVSRRGLAAFASSLDQIGPFARTVEDLALVLNAISQKDELDSTCSCRPRPDYTKALNA 254 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-HTQYALPAYYII 317 +S++G VG+ KE + + P + K + Q + + + GA+IVEI+LP +Y LP YYI+ Sbjct: 255 ESLKGRRVGVIKEIQEYAIDPEVRKAFDQTLKFCERQGAEIVEITLPTMVEYGLPCYYIL 314 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 + AEASSNLAR+DGVRYGL + + +L++Y TR+ GFG EVK RI++GTYVLSS YD+ Sbjct: 315 ALAEASSNLARFDGVRYGLSTDAESLLDLYTKTRAQGFGLEVKRRILVGTYVLSSGYYDA 374 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +YL A+K R LIK++F +AF VD IL PT P+ AF G+ N+ M D+FT+ Sbjct: 375 YYLVAQKARQLIKQEFVKAF-GSVDTILLPTAPSPAFKKGELINDPIQM--YMADIFTLP 431 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 VN+AGLPA+S+ A PLG+Q IGQ + EE L S + EK G Sbjct: 432 VNLAGLPALSLNAGFSADGRPLGVQFIGQWWDEEGLLSTASLHEKTFG 479 >gi|53724970|ref|YP_102003.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia mallei ATCC 23344] gi|67642472|ref|ZP_00441228.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei GB8 horse 4] gi|121599232|ref|YP_994079.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia mallei SAVP1] gi|124384976|ref|YP_001028258.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia mallei NCTC 10229] gi|126450573|ref|YP_001081902.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia mallei NCTC 10247] gi|167001943|ref|ZP_02267733.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei PRL-20] gi|254176837|ref|ZP_04883494.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei ATCC 10399] gi|254203683|ref|ZP_04910043.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei FMH] gi|254208659|ref|ZP_04915007.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei JHU] gi|254360286|ref|ZP_04976556.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei 2002721280] gi|81605678|sp|Q62MR4|GATA_BURMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217649|sp|A3MNR6|GATA_BURM7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217650|sp|A2S8I9|GATA_BURM9 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217651|sp|A1V776|GATA_BURMS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|52428393|gb|AAU48986.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei ATCC 23344] gi|121228042|gb|ABM50560.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei SAVP1] gi|124292996|gb|ABN02265.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei NCTC 10229] gi|126243443|gb|ABO06536.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei NCTC 10247] gi|147745195|gb|EDK52275.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei FMH] gi|147750535|gb|EDK57604.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei JHU] gi|148029526|gb|EDK87431.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei 2002721280] gi|160697878|gb|EDP87848.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei ATCC 10399] gi|238523633|gb|EEP87070.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei GB8 horse 4] gi|243062351|gb|EES44537.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia mallei PRL-20] Length = 496 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 217/493 (44%), Positives = 311/493 (63%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ANGEAGPLAGLPIVHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + SSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDTSAVPGG-----SSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|220905416|ref|YP_002480728.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254790391|sp|B8J405|GATA_DESDA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|219869715|gb|ACL50050.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 486 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 216/494 (43%), Positives = 316/494 (63%), Gaps = 15/494 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ ++++ L+ K++SAV++ + + I + + A + V A+ A A A D Sbjct: 1 MTDICSLSLTAVAQALQKKELSAVDVTTACLDRITATEPHLAALLYVNAENALARATTLD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + AR L G+P+ +KD F+T+G+ T A S +L+G+ P Y++ QKL + GAV+LG Sbjct: 61 SEGPDA-ARPLWGVPVTLKDAFSTRGMPTTAGSRMLEGYTPFYDAFAVQKLHEAGAVILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMGSS E S + +PW + +K PGGSSGGS+A+V C AS+GTDT Sbjct: 120 KTNLDEFAMGSSTENSAFKVTRNPW----NLNK-VPGGSSGGSAASVTAGQCFASLGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G VG+KPTYGR SR G+I++ SLDQ G +TR+V D A +L AIAGYD Sbjct: 175 GGSIRQPASFCGCVGLKPTYGRVSRYGVIAYGSSLDQVGPLTRSVEDCARVLTAIAGYDS 234 Query: 241 CDATCVNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D TC P DY L + ++G +GIP+E+ LS + + I ++ A++ Sbjct: 235 RDNTCDPRPAEDYAATLSSRPLKGARLGIPREFYGQGLSDEVRAACEAAIQAARNQDAEL 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQE 358 VE+SLPHT A+ YYII+ AEASSNLAR+DGVR+G R + K++ ++Y ++R+ GFG E Sbjct: 295 VEVSLPHTDAAIATYYIIAMAEASSNLARFDGVRFGHRSADIKNLDDLYVHSRTEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G YVLSS YD++Y +A ++R LI+ + A Q D +L P +P +A LG Sbjct: 355 VKRRIMLGAYVLSSGYYDAYYRKAAQVRRLIRDELLAALGQ-CDALLAPVSPVTARDLG- 412 Query: 419 EENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSV 476 N+ IY D +T+++N+AGLP +S+P L K MP+G+Q+IG+PF E + ++ Sbjct: 413 --GNTADPLQIYLMDAYTLSLNLAGLPGLSLPVGLGAKSGMPVGMQIIGKPFEETQVLAL 470 Query: 477 GQIIEKE-AGYFRP 489 G +E+ G RP Sbjct: 471 GHSLEQALPGIGRP 484 >gi|296270787|ref|YP_003653419.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermobispora bispora DSM 43833] gi|296093574|gb|ADG89526.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermobispora bispora DSM 43833] Length = 499 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 221/481 (45%), Positives = 311/481 (64%), Gaps = 27/481 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 + S+++SAVE+V +++ I + +++A++ V A+ A A A D+RI G+ L G+ Sbjct: 15 IASREVSAVEVVQAHLDRIAEVDGEIHAFLHVDAEAALAQARAVDERIARGERLGPLAGV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T + T A S IL+G+RP Y++TVT++L + G V++GK N+DEFAMGSS E Sbjct: 75 PIAHKDVFTTVDMPTTAGSKILEGWRPPYDATVTRRLREAGLVIIGKTNLDEFAMGSSTE 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S YGP +PW + PGGSSGGSSAAVA + + GTDTGGSIRQPA+ TG V Sbjct: 135 NSAYGPTRNPWDT-----SRVPGGSSGGSSAAVAAYEVPLATGTDTGGSIRQPAAVTGIV 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G+I+FA SLD G RTV D+A+L +A +G+D D+T ++ PVP Sbjct: 190 GMKPTYGGSSRYGLIAFASSLDTPGPFARTVLDAALLHEAFSGHDPLDSTSIDAPVPPVV 249 Query: 255 RALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQG--------ISWLKDAGAKIVEISLP 305 A Q+ + G+ +G+ KE L + +Q+G + L+ GAKIVE+S P Sbjct: 250 EAARQADVSGVRIGVVKE-----LGGEGGEGYQRGVLARFTEAVELLESLGAKIVEVSCP 304 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKHR 362 YALPAYY+I+P+E SSNLAR+D +RYGLRV + E+ TR+ GFG EVK R Sbjct: 305 AFTYALPAYYLIAPSECSSNLARFDAMRYGLRVGDDGSRSAEEVMALTRAAGFGPEVKRR 364 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LSS YD++Y +A+K+RTLI RDF AF+Q DV+++PTTPT+AFP+G+ ++ Sbjct: 365 IMLGTYALSSGYYDAYYGQAQKVRTLIMRDFEAAFQQA-DVLVSPTTPTTAFPIGERVDD 423 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 M D+ T+ N+AG AISVP L E +P+GLQ++ ++ + V +E Sbjct: 424 --PMAMYLADLCTIPSNLAGNAAISVPCGLADEDDLPVGLQIMAPVLSDDRCYRVAAALE 481 Query: 482 K 482 K Sbjct: 482 K 482 >gi|149012186|ref|ZP_01833295.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP19-BS75] gi|147763788|gb|EDK70722.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP19-BS75] Length = 488 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKHSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|332204462|gb|EGJ18527.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA47901] Length = 488 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPATFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|149023723|ref|ZP_01836203.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP23-BS72] gi|147929660|gb|EDK80652.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP23-BS72] Length = 488 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQTTLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|15900355|ref|NP_344959.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae TIGR4] gi|111657910|ref|ZP_01408621.1| hypothetical protein SpneT_02000919 [Streptococcus pneumoniae TIGR4] gi|225854009|ref|YP_002735521.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae JJA] gi|20454927|sp|Q97SE6|GATA_STRPN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790407|sp|C1CCK0|GATA_STRZJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|14971907|gb|AAK74599.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus pneumoniae TIGR4] gi|225722454|gb|ACO18307.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae JJA] Length = 488 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 297/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWNHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|189499411|ref|YP_001958881.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlorobium phaeobacteroides BS1] gi|229485868|sp|B3EM22|GATA_CHLPB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189494852|gb|ACE03400.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlorobium phaeobacteroides BS1] Length = 477 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 213/482 (44%), Positives = 302/482 (62%), Gaps = 12/482 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + R RL S++IS +V Y++ I N + N YI V +A A+E D+++ Sbjct: 1 MYFSSYQNLRKRLLSREISCETVVLDYLERIRK-NHERNVYITVFNDQALQRAKELDRKL 59 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L G+P+ +KD + K S IL+G+ Y +T ++L AV LGK+ Sbjct: 60 EAGEQPGRLFGLPMAVKDNLSVKDASLTCASKILEGYTAVYNATAVERLLKEDAVFLGKV 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S +GPV +P+ D PGGSSGGS+AAVAG L ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAFGPVPNPY-----DDSRVPGGSSGGSAAAVAGDLAMVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F VG+KPTYGR SR G+++F S DQ GI++R D+A++L IAG D D Sbjct: 175 SVRQPAGFCNVVGLKPTYGRISRYGLVAFGSSFDQIGILSRNCDDAALVLGVIAGKDAAD 234 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 T VPDY + S++GM +G+P+EY + L P + + + L+DAGA++V+ Sbjct: 235 TTSSQHVVPDYLSEMGSVSLKGMKIGVPEEYFPETLDPGVALAVRNRLEELRDAGAELVD 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 I+LP + +A+ AYYI++ AEASSNLAR+DG RYG R + D+ MY N+RS GFG EVK Sbjct: 295 IALPESDHAIAAYYILTTAEASSNLARFDGARYGYRSGDASDLSGMYVNSRSEGFGGEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R + + EA + VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRVFLDRYKEALAK-VDVIAGPTSPFPPFGIGDKM 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M DVFTV ++AGLPA+SVPA +P+GLQLIG F E L + + I Sbjct: 414 DEPLEM--YLADVFTVPASIAGLPALSVPAGFDRSGLPVGLQLIGDFFDEGKLLGIAREI 471 Query: 481 EK 482 ++ Sbjct: 472 QR 473 >gi|148983831|ref|ZP_01817150.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP3-BS71] gi|168482676|ref|ZP_02707628.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC1873-00] gi|168490650|ref|ZP_02714793.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC0288-04] gi|168495041|ref|ZP_02719184.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC3059-06] gi|194397146|ref|YP_002037115.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae G54] gi|225856165|ref|YP_002737676.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae P1031] gi|229464470|sp|B5E1P7|GATA_STRP4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790408|sp|C1CIT8|GATA_STRZP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|147923978|gb|EDK75090.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP3-BS71] gi|172043804|gb|EDT51850.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC1873-00] gi|183574845|gb|EDT95373.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC0288-04] gi|183575088|gb|EDT95616.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae CDC3059-06] gi|194356813|gb|ACF55261.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Streptococcus pneumoniae G54] gi|225724360|gb|ACO20212.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae P1031] gi|301799533|emb|CBW32081.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae OXC141] gi|332203607|gb|EGJ17674.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA47368] Length = 488 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|290965817|gb|ADD70306.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Zonotrichia albicollis] Length = 524 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 205/491 (41%), Positives = 290/491 (59%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L+ ++ EL + I+ S +NAYI V + A AEES++R G L+GI Sbjct: 13 LKEGRVAPTELCQRCLALIK-STKFLNAYITVAEETAMKQAEESEERYKKGQPLGILDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F T GI T S++L G+ Y +TV QKL D GAV+LGK N+DEFAMGS + Sbjct: 72 PIAVKDNFNTAGIETTCASNMLKGYISPYNATVVQKLLDQGAVLLGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPWR-SMDSTDKFTPGGSSGGSSA--------------AVAGFLCAASIGTD 179 +GPV +PW S +K P + AVA F C A++G+D Sbjct: 132 DGVFGPVRNPWSYSKQYKEKSGPKSHPEDEESNWVITGGSSGGSAAAVASFTCFAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KPTYG SR G+I S+D GI+TR V D+A+LL ++AG+D Sbjct: 192 TGGSTRNPAAHCGVVGLKPTYGLISRHGLIPLVNSMDVPGILTRCVDDAAVLLGSLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + +E + +++GIPKEY LS I W + K+AGAK+ Sbjct: 252 PKDSTTIQDDFMPFELHNLADVSKLSIGIPKEYHAPGLSSEILALWSKAADLFKNAGAKV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 VE+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R + KD E +Y TR GF Sbjct: 312 VEVSLPHTPYSIVCYHVLCTAEVASNMARFDGLEYGHRSDMKDSTESLYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 V+ RI+ G Y L + Y+ ++++A+K+R LI DF + F GVD++LTPTT A P Sbjct: 372 VRGRILSGNYFLLKQNYEKYFVKAQKVRRLIANDFVKVFRSGVDILLTPTTLRDAAPYTE 431 Query: 418 --KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +E+N + S +D+ T A NMAGLPAISVP AL E+ +P+GLQ IG+ F+E+ L + Sbjct: 432 FIQEDNRTRSA---QDDILTQAANMAGLPAISVPTALSERGLPVGLQFIGRSFQEKQLLT 488 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 489 VAKWFEKQVQF 499 >gi|307704285|ref|ZP_07641204.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus mitis SK597] gi|307622196|gb|EFO01214.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus mitis SK597] Length = 488 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 299/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ + +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSRETAINAFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVTNAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVCISDFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|187736269|ref|YP_001878381.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Akkermansia muciniphila ATCC BAA-835] gi|229485749|sp|B2UMP4|GATA_AKKM8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|187426321|gb|ACD05600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Akkermansia muciniphila ATCC BAA-835] Length = 470 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 217/481 (45%), Positives = 307/481 (63%), Gaps = 25/481 (5%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +++ RDRLR K++S ELV+ AIE ++ NAYI + A AA +D + Sbjct: 8 LAQWRDRLRRKELSPAELVNLTADAIE-ADRTTNAYISFDREAALHAAAGADI------S 60 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI +KD G T+ S +L + Y++T + L + G + LG+ NMDEFA Sbjct: 61 SPLAGIPIAVKDNINVLGQPTRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFA 120 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MG+S E S YG +P ++ D+ PGGSS GS+AAVA A++G+DTGGSIRQPA Sbjct: 121 MGASGENSAYGITRNP----EAPDRI-PGGSSSGSAAAVASATAIAALGSDTGGSIRQPA 175 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG+KPTYGR SR G+++FA SLDQ G +TRTV D+AILL+AI+G+D D+T N Sbjct: 176 GHCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANC 235 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPD+E AL + ++G+ VGIP EY P I + Q + L+ GA++VE++LPH Sbjct: 236 PVPDFEAALGRDVKGLKVGIPSEYFTSGNHPGISEAVQNTVKQLESLGAELVEVNLPHAD 295 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGT 367 + AYYII+ AEASSNL+R+DGVRYG R E ++E++ TR GFG EVK RI++GT Sbjct: 296 AVVAAYYIIACAEASSNLSRFDGVRYGKRAEDAAGLVELFSRTREEGFGPEVKRRIILGT 355 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLSS YD++Y RA+K+R+L+ RDF EAF + VD+I+ PT+P A +G ++ Sbjct: 356 YVLSSGYYDAYYSRAQKVRSLVARDFAEAFSR-VDIIVGPTSPAPAPKIGDS-----ALD 409 Query: 428 HIYN---DVFTVAVNMAGLPAISVPAALCEK---KMPLGLQLIGQPFREETLFSVGQIIE 481 H+ D++T+ N+AGLPA+S+P + ++P+G Q++ FRE+ L G + Sbjct: 410 HLQTYLADIYTIPANLAGLPAMSIPCGTVRESGMELPVGFQMMAPHFREDLLLKTGFALG 469 Query: 482 K 482 K Sbjct: 470 K 470 >gi|50744632|ref|XP_419807.1| PREDICTED: similar to Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Gallus gallus] Length = 587 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 201/491 (40%), Positives = 292/491 (59%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + A+ S +NAYI V + A AEES+KR G +L+GI Sbjct: 76 LKEGQITPTELCQRCL-ALVRSTQFLNAYITVAEETALKQAEESEKRYQRGQPLGELDGI 134 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F T GI T S++L G+ Y +TV QKL D GAV+LGK N+DEFAMGS + Sbjct: 135 PIAVKDNFNTAGIETTCASNMLKGYISPYNATVVQKLLDQGAVLLGKTNLDEFAMGSGST 194 Query: 135 TSYYGPVISPWR-SMDSTDKFTPGGSSGGSSA--------------AVAGFLCAASIGTD 179 +GPV +PW S +K P S ++ AV+ F C A++G+D Sbjct: 195 DGVFGPVRNPWSYSRQYKEKSIPRSDSEPENSNWVIAGGSSGGSAAAVSAFTCFAALGSD 254 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KPTYG SR G+I S+D GI+TR V D+A++L ++AG+D Sbjct: 255 TGGSTRNPAAHCGVVGLKPTYGLISRHGLIPLVNSMDVPGILTRCVDDAAVVLGSLAGHD 314 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V + + +++GIPKEY + LS I W + K+AGAK+ Sbjct: 315 PKDSTTVQDIFQPFALPTLTDVSKLSIGIPKEYHVPGLSSEILAVWSKAADLFKNAGAKV 374 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 +E+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R + + E MY TR GF Sbjct: 375 IEVSLPHTHYSIVCYHVLCTAEVASNMARFDGLEYGHRSDMNESTESMYAATRREGFSDV 434 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 V+ RI+ G Y L + Y+ ++++A+K+R LI DF + F G+D++LTP T + A P Sbjct: 435 VRGRILSGNYFLLKQNYEDYFVKAQKVRRLIANDFVKVFGSGIDILLTPITLSDAVPYVE 494 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 KE+N + S +D+ T A NMAGLPA++VP AL E+ +P+GLQ IG+ F+E+ L + Sbjct: 495 FIKEDNRTRS---TQDDILTQAANMAGLPAVNVPTALSERGLPIGLQFIGRSFQEKQLLT 551 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 552 VAKWFEKQVQF 562 >gi|254496605|ref|ZP_05109472.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella drancourtii LLAP12] gi|254354173|gb|EET12841.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella drancourtii LLAP12] Length = 481 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 209/494 (42%), Positives = 313/494 (63%), Gaps = 21/494 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L+ +S++ L +S+VEL Y IE ++NA+I + ++A A+++D Sbjct: 1 MEQLSLKELSQA---LHQGKLSSVELTQYYFAQIEKYK-ELNAFISLDEEQALLDAQQAD 56 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K + G + L GIP+ +KD F T+ ++T S +L F+ YE+T+ KL + G +++G Sbjct: 57 KELQEGKGKVLTGIPMALKDLFCTQRMNTTCGSKMLANFKAPYEATLASKLKEQGTILVG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSSNE SY+G V +PW + PGGSSGGS+AAVA L +IG+DT Sbjct: 117 KTNMDEFAMGSSNENSYFGAVKNPW-----AKERVPGGSSGGSAAAVAAGLIPFTIGSDT 171 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ G GIKPTYG SR G++++A SLDQAG + R+ D A++L AIAG+D+ Sbjct: 172 GGSIRQPAALCGISGIKPTYGLISRYGMVAYASSLDQAGPMARSAEDLALVLHAIAGFDD 231 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + +PDY L++ + + +G+P + + P I + + + GA+I+ Sbjct: 232 KDSTSADSFIPDYVAELNKPLSTVRIGLPSCFFQPQVEPEIQQAILTAVRVFEHLGAQII 291 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEV 359 + L +P YY+++ AEASSNL+RYDG+R+G R L E+ +RS GFG EV Sbjct: 292 NLDLALQPLWVPCYYVVACAEASSNLSRYDGLRFGHRSRKASCLNELIRYSRSEGFGNEV 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + RI+ GT+VLSS +D++YL+A+KIR LI+ + A + VD+IL PTTPT+AF LG++ Sbjct: 352 QRRILTGTHVLSSGYFDAYYLQAQKIRRLIQEELLTAL-KSVDIILGPTTPTTAFKLGEK 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N + + DVFTVA N+AGLPAIS+PA + + +P+G+QL+G+ F E L +V Sbjct: 411 IAN--PIQNYLADVFTVAANLAGLPAISIPAGMGQ-GLPIGMQLMGKHFSESRLLNV--- 464 Query: 480 IEKEAGYFRPHKWW 493 A +++ H W Sbjct: 465 ----AHHYQQHTDW 474 >gi|239906369|ref|YP_002953110.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfovibrio magneticus RS-1] gi|259647213|sp|C4XQ59|GATA_DESMR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|239796235|dbj|BAH75224.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Desulfovibrio magneticus RS-1] Length = 488 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 218/484 (45%), Positives = 311/484 (64%), Gaps = 13/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ ++++ RD+L K++SAVE + + IE + +++A + A+ A AAA+ D Sbjct: 1 MSDITTLSLTALRDKLARKELSAVEAASACLARIEATEPKIHALLHCDAEAALAAAKALD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 N D R L G+P+ +KD K T S IL+ F P Y+++ +K+ GAV+LG Sbjct: 61 AAGPNPDQR-LWGVPVLVKDAICVKDAPTTCGSKILENFTPFYDASCIEKMRAAGAVILG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW PGGSSGGS+AAVA C A++GTDT Sbjct: 120 KANMDEFAMGSSTENSAYKVTANPWDLGK-----VPGGSSGGSAAAVAAGQCFAALGTDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F GTVGIKPTYGR SR G++++ SLDQ G +TRT D+A +L IAG D Sbjct: 175 GGSIRQPAAFCGTVGIKPTYGRVSRYGLVAYGSSLDQIGPLTRTADDAAAVLGVIAGPDP 234 Query: 241 CDATCVNLPVPDYE--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+TC VPD+E A + G+T+G+P EY + + + + + K GA Sbjct: 235 KDSTCAPRDVPDFEAALAGAADLAGLTIGLPDEYWGEGVDAEVRDACRAAVDTAKSLGAN 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 +V +SLPHT YA+ YYI++ AEASSNLAR+DGVRYG R E + + E+YE +RS GFG Sbjct: 295 VVPVSLPHTPYAVATYYIVAMAEASSNLARFDGVRYGYRAPEAQSLEELYELSRSKGFGP 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IG YVLS+ YD++Y +A ++R LI++DF AFE+ DVI PT+P +AF +G Sbjct: 355 EVQRRIVIGAYVLSAGYYDAYYRKAAQVRRLIRQDFLNAFEK-CDVICGPTSPFAAFTIG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSV 476 + ++ M +D+FT+++N+AGLP +S+P L MP+G+QL G+ F E T+ Sbjct: 414 QMSDDPLQM--YLSDIFTISLNLAGLPGLSMPVGLGTTSAMPIGMQLFGRAFDEATILRT 471 Query: 477 GQII 480 +++ Sbjct: 472 AKVL 475 >gi|169833059|ref|YP_001693941.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae Hungary19A-6] gi|229464471|sp|B1I9M8|GATA_STRPI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|168995561|gb|ACA36173.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae Hungary19A-6] Length = 488 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L ++ Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDLNSLNHD 415 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 416 PVAM--YLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|225352567|ref|ZP_03743590.1| hypothetical protein BIFPSEUDO_04191 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156761|gb|EEG70155.1| hypothetical protein BIFPSEUDO_04191 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 509 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 212/485 (43%), Positives = 310/485 (63%), Gaps = 19/485 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL ++ +E ++++K++S+ ELV+++++ IE + + A+++V +A A+ D Sbjct: 1 MSELVKLSAAEMAAKIKAKEVSSRELVEAHLEVIEAAEPSIKAFLKVSGDQALEQADAFD 60 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + A+ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G + Sbjct: 61 AKSDEEKAQLPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GT Sbjct: 121 LGKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSAAAVAAFEAPLALGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQP S TGTVG+KPTYG SR G I+ A SLDQ G +RTV D+A+L + I G+ Sbjct: 176 DTGGSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDAALLQEVIGGH 235 Query: 239 DECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+ D+T + P P A + + ++G+ VG+ KE + P + + +G+ L++ Sbjct: 236 DKRDSTSIPESPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYEN 349 GA++ E+SLPH Y+L AYYII P+E SSNLARYDG+RYGLRV + M Sbjct: 296 MGAEVTEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAY 355 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE+ VDV++ PT+ Sbjct: 356 TREAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEK-VDVLVGPTS 414 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P +AF G++ + +M I D+ T+ N+AG+PA+S+PA L + +P+G Q + R Sbjct: 415 PVTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQR 472 Query: 470 EETLF 474 +E ++ Sbjct: 473 DEAMY 477 >gi|182683401|ref|YP_001835148.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae CGSP14] gi|303255414|ref|ZP_07341480.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS455] gi|303259509|ref|ZP_07345486.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP-BS293] gi|303262372|ref|ZP_07348315.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP14-BS292] gi|303264790|ref|ZP_07350707.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS397] gi|303266629|ref|ZP_07352514.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS457] gi|303268862|ref|ZP_07354649.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS458] gi|229464472|sp|B2ILX8|GATA_STRPS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|182628735|gb|ACB89683.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae CGSP14] gi|301801346|emb|CBW34029.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae INV200] gi|302597659|gb|EFL64739.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS455] gi|302636471|gb|EFL66963.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP14-BS292] gi|302639443|gb|EFL69901.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP-BS293] gi|302641643|gb|EFL72003.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS458] gi|302643873|gb|EFL74135.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS457] gi|302645657|gb|EFL75887.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae BS397] Length = 488 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLEDIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|297678804|ref|XP_002817250.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Pongo abelii] Length = 528 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 201/493 (40%), Positives = 292/493 (59%), Gaps = 27/493 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFLCAASIGTD 179 +GPV +PW + K P + S + F C A++G+D Sbjct: 132 DGVFGPVKNPWSYSKQYREKRKQNPHSKNEDSDWLITGGSSGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L A+AG D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPD 251 Query: 240 ECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ P+ P +L + + +GIPKEY + LS + W + + GA Sbjct: 252 PRDSTTVHDPINKPFMLPSL-ADVSKLCIGIPKEYLVPELSSEVQSLWSKAADLFESEGA 310 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFG 356 K++E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 KVIEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDIDVSTEAMYAATRREGFN 370 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 V+ RI+ G Y L Y++++++A+K+R LI DF F GVDV+LTPTT + A P Sbjct: 371 DVVRGRILSGNYFLLKENYENYFVKAQKVRRLIANDFVNVFNSGVDVLLTPTTLSEAVPY 430 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L Sbjct: 431 LEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQL 487 Query: 474 FSVGQIIEKEAGY 486 +V + EK+ + Sbjct: 488 LTVAKWFEKQVEF 500 >gi|187930755|ref|YP_001901242.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia pickettii 12J] gi|309780249|ref|ZP_07675000.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia sp. 5_7_47FAA] gi|229486000|sp|B2U7V7|GATA_RALPJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|187727645|gb|ACD28810.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ralstonia pickettii 12J] gi|308920952|gb|EFP66598.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia sp. 5_7_47FAA] Length = 499 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 218/485 (44%), Positives = 307/485 (63%), Gaps = 25/485 (5%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K++SA EL Y+ IE + + +NA+ V A+ A A +D RI G+A L G+ Sbjct: 12 QLAAKEVSAEELARHYLSRIE-AGAHLNAFTHVDAEATLAQARAADARIAAGNAAPLTGV 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +L + +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLGNYVSPFDATVVERLGAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSAFGAVKNPWNL-----EHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + V Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDPRDSTSLEPGRGGDV 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L Q +Q G+ +G+PKEY + L+ + T + ++ L+ GA +V+ Sbjct: 246 EDFGRLLGQPLQGADAARPLAGLRIGLPKEYFGEGLADDVRTTVRAALAELEKLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY +R+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKSRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---EQGVDVILTPTTPTSAFPLG 417 RI++G YVLS YD++YL+A+KIR +I +DF + DVI+ P PT A+ LG Sbjct: 366 RRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQNVLAGANRQCDVIMGPVAPTVAWKLG 425 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 426 EKTSDPVQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIA 483 Query: 478 QIIEK 482 ++ Sbjct: 484 HAFQQ 488 >gi|109072213|ref|XP_001089760.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog isoform 3 [Macaca mulatta] Length = 528 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 200/493 (40%), Positives = 293/493 (59%), Gaps = 27/493 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFLCAASIGTD 179 +GPV +PW + K P + S + F C A++G+D Sbjct: 132 DGIFGPVKNPWSYSKQYREKRKQNPHSKNEDSDWLITGGSSGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L A+AG D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPD 251 Query: 240 ECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ P+ P +L + + +GIPKEY + LS + W + + GA Sbjct: 252 PKDSTTVHDPINKPFMLPSL-ADVSKLCIGIPKEYLIPELSSEVRSLWSKAADLFESEGA 310 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFG 356 K++E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 KVLEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDINVSTEAMYAATRREGFN 370 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 V+ RI+ G + L Y++++++A+K+R LI DF AF GVDV+LTPTT + A P Sbjct: 371 DVVRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPY 430 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L Sbjct: 431 LEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQL 487 Query: 474 FSVGQIIEKEAGY 486 +V + EK+ + Sbjct: 488 LTVAKWFEKQVQF 500 >gi|154488132|ref|ZP_02029249.1| hypothetical protein BIFADO_01703 [Bifidobacterium adolescentis L2-32] gi|154083605|gb|EDN82650.1| hypothetical protein BIFADO_01703 [Bifidobacterium adolescentis L2-32] Length = 511 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 212/484 (43%), Positives = 311/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++K++S+ ELV++++ IE++ + A+++V A +A A+ D Sbjct: 4 TELVKLSAAEMAAKIKAKEVSSRELVEAHLAVIESAEPSVKAFLKVSADQALEQADAFDA 63 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + A+ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 64 KSDEDKAQMPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 124 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSAAAVAAFEAPLALGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP S TGTVG+KPTYG SR G I+ A SLDQ G +RTV DSA+L + I G+D Sbjct: 179 TGGSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDSALLQEVIGGHD 238 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A + + ++G+ VG+ KE + P + + +G+ L++ Sbjct: 239 KRDSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEEM 298 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA+++E+SLPH Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 299 GAEVIEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYT 358 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE+ VDV++ PT+P Sbjct: 359 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEK-VDVLVGPTSP 417 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ + +M I D+ T+ N+AG+PA+S+PA L + +P+G Q + R+ Sbjct: 418 VTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQRD 475 Query: 471 ETLF 474 E ++ Sbjct: 476 EVMY 479 >gi|313833825|gb|EFS71539.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL056PA1] Length = 501 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 213/488 (43%), Positives = 305/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G RTV D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AG + Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGGE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 E+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 GGEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|264676413|ref|YP_003276319.1| GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Comamonas testosteroni CNB-2] gi|262206925|gb|ACY31023.1| GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Comamonas testosteroni CNB-2] Length = 496 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 212/491 (43%), Positives = 306/491 (62%), Gaps = 20/491 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+ ++V+E +LR+K +SA E ++ A + + A++ + A A+ +D Sbjct: 4 TELHQLSVAELAAQLRAKQVSATEAAQHFL-ARAKQHQNLGAFVAINEDATLAQAKAADA 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+PI KD F TK T A S +L+G++ +++TV +KL ++G V LGK Sbjct: 63 LIAEGKGGKLAGVPIAHKDIFVTKDFPTTAASKMLEGYQSPFDATVVRKLAESGVVTLGK 122 Query: 122 LNMDEFAMGSSNETSYYGPV--------ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 LN DEFAMG +NE S PV +PW ++ PGGSSGGS+AAVA L Sbjct: 123 LNCDEFAMGGANENSAVAPVGFDAAQPVRNPW-----NNERVPGGSSGGSAAAVAARLAP 177 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL Sbjct: 178 AVTGTDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMGRSAEDCALLLS 237 Query: 234 AIAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 + G D + D+T ++ P D+ L+ SI+G+ +G+P E+ + LS + K + Sbjct: 238 EMCGPDLDRDSTSLDYPAEDFTAKLNNSIEGLRIGVPAEFFGEGLSDDVRKAVDAALKEY 297 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTR 351 + GAK+V +SLP T+ ++P YYI++PAEASSNL+R+DGV++G R +D+ +MY+ TR Sbjct: 298 EKLGAKLVPVSLPRTELSVPVYYILAPAEASSNLSRFDGVKFGHRAAKYEDLNDMYKKTR 357 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RIMIG YVLS YD++YL+A+KIR +I DF AF+ DVI PT Sbjct: 358 AEGFGDEVKRRIMIGAYVLSEGYYDAYYLQAQKIRRMIADDFQAAFKD-CDVIAGAAAPT 416 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A+ +G + + + + D+FT+ ++AGLP +S+PA + MP+GLQLIG F E Sbjct: 417 TAWAIGGKAD---PVSNYLADIFTLPASLAGLPGLSLPAGFGDGGMPVGLQLIGNYFSEA 473 Query: 472 TLFSVGQIIEK 482 L + ++ Sbjct: 474 KLLNAAHRFQQ 484 >gi|322387223|ref|ZP_08060833.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus infantis ATCC 700779] gi|321141752|gb|EFX37247.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus infantis ATCC 700779] Length = 488 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 297/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ + +N+++ + +A A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLEDIKSRETALNSFVTIAEDQALAQAKAIDETG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T G+ T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGLLTTAASKMLYNYEPIFDATAVANAKSKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIACEDVKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + + + GA + E+S Sbjct: 237 TSAPIRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKEVILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFENVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVQ-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|32472928|ref|NP_865922.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopirellula baltica SH 1] gi|39931388|sp|Q7UT33|GATA_RHOBA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|32397607|emb|CAD73608.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopirellula baltica SH 1] Length = 499 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 216/490 (44%), Positives = 305/490 (62%), Gaps = 19/490 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIING 66 + SE +L S +++AVE++ + AI S +NA+ V + A AAE D R Sbjct: 4 SASEILKQLDSGEVTAVEVIAQSLAAIRASQPTINAFTHVAEETAMQAAEAVDADRKAGK 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P+ IKD T + T S +L+GF P Y++TV +L GA+++GK NMDE Sbjct: 64 TLGPLAGLPVAIKDVLCTSDMPTTCSSKMLEGFVPPYDATVVARLKSAGAIVVGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG+S ETS G +PW D+T TPGGSSGG++AAVA S+GTDTGGSIRQ Sbjct: 124 FAMGASTETSAMGVTGNPW---DTTK--TPGGSSGGAAAAVAAGAVPLSLGTDTGGSIRQ 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G G+KPTYGR SR G+++FA SLDQAG + +V D AI L+A+AGYD D+T V Sbjct: 179 PAAFCGITGLKPTYGRVSRYGLVAFASSLDQAGPMGWSVDDVAIGLQAMAGYDPRDSTSV 238 Query: 247 NLPVPDYERAL-DQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 N VPD+ A+ + ++GM +G+ +E D +SP + S ++ GA+IVE+ L Sbjct: 239 NAEVPDFTPAMAAEDVRGMRIGVLREGLDQDGISPAVRDALATAESVFREQGAEIVEVEL 298 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-------LE-MYENTRSIGFG 356 PH++Y +P YY+I+P EASSNL+R+DG YG RV +I LE MY +R+ GFG Sbjct: 299 PHSKYWVPTYYVIAPCEASSNLSRFDGAHYGYRVADAEIAAADSGPLEAMYSLSRAGGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIM+GTY LS YD++Y +A K+R LI+ D+ AF+Q VD++L P TP+ AF L Sbjct: 359 SEVKRRIMVGTYALSEGYYDAYYNQALKVRRLIRNDYDAAFQQ-VDLMLGPVTPSPAFAL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ ++ +M D+FTV N+AG+PAIS+P +P+G+QL E L Sbjct: 418 NEKTDDPIAM--YLCDLFTVGANLAGVPAISLPGGFDAVGLPVGVQLQAPVMEETRLLRA 475 Query: 477 GQIIEKEAGY 486 G + + + + Sbjct: 476 GNVFQMASDF 485 >gi|311244242|ref|XP_003121371.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog isoform 1 [Sus scrofa] Length = 526 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 198/491 (40%), Positives = 289/491 (58%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKEGHSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVAG------------FLCAASIGTD 179 +GPV +PW + + G S+ + G F C A++G+D Sbjct: 132 DGIFGPVKNPWSYSKQYRGKKQQKTHGEDEDSNWLITGGSSGGSAAAVSAFTCFAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D Sbjct: 192 TGGSTRNPAAHCGVVGLKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGVLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V PV + + + VGIPKEY LS + W + + GAK+ Sbjct: 252 PKDSTTVQDPVKPFMLPSLTDVSKLCVGIPKEYLTPELSSEVQSLWSKAADLFESEGAKV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 +E+SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF Sbjct: 312 IEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLEYGHRCDVDVSTEAMYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 V+ RI+ G + L Y++++++A+K+R LI DF F+ GVDV+LTPTT + A P Sbjct: 372 VRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNVFKSGVDVLLTPTTLSEAVPYLE 431 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L + Sbjct: 432 FIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPMALSSQGLPVGLQFIGRAFCDQQLLT 488 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 489 VAKWFEKQVQF 499 >gi|309812167|ref|ZP_07705925.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dermacoccus sp. Ellin185] gi|308433854|gb|EFP57728.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dermacoccus sp. Ellin185] Length = 516 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 208/483 (43%), Positives = 303/483 (62%), Gaps = 15/483 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIIN 65 ++ +E +L +++VEL +++ I + ++A++ V A++A A A + D R Sbjct: 21 LSAAEMASKLADGSLTSVELTQAHLDRIAAVDGDVHAFLRVNAEEALATAAQVDADRAAG 80 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P+ +KD TKG T A S +L+G+ P Y++T+ KL G +LGK NMD Sbjct: 81 KTLHPLAGVPVAVKDVVTTKGQPTTAGSKMLEGWIPPYDATIVTKLRAAGMPILGKTNMD 140 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW + PGGS GGS+AAVA F ++GTDTGGSIR Sbjct: 141 EFAMGSSTEHSAYGPTHNPWDL-----ERIPGGSGGGSAAAVAAFEAPLAVGTDTGGSIR 195 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS TGTVG KPTYG SR G+I+ A SLDQAG TR+V D+A+L + G+D D+T Sbjct: 196 QPASVTGTVGTKPTYGGISRYGLIAMASSLDQAGPCTRSVLDAALLHDVMGGHDGMDSTS 255 Query: 246 VNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PVP E A + GM +GI ++ + + + + ++ L DAGA++V +S Sbjct: 256 IDAPVPPVVEAAKRGDVSGMKIGIIEQLDGEGYQSGVKARFDEAVAALVDAGAEVVTVSC 315 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-----VEGKDILEMYENTRSIGFGQEV 359 P + AL AYY++ P+E SSNLA++D +RYGLR VE ++ +R GFG EV Sbjct: 316 PSFEQALAAYYLVMPSEVSSNLAKFDAMRYGLRVSPEGVEAPSAEQVMAASRDAGFGSEV 375 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GTY LSS YD++Y +A+K+RTLI RDF +AFE DV+++PT PT+AF LG++ Sbjct: 376 KRRIILGTYALSSGYYDAYYGQAQKVRTLIARDFAKAFET-ADVLVSPTCPTTAFKLGEK 434 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + M NDV T+ N+AGLP +S+PA L + +P+G Q++ ++E ++ VG Sbjct: 435 LED--PMAMYLNDVATIPANLAGLPGMSLPAGLSDDGLPVGFQILAPATKDERMYEVGAA 492 Query: 480 IEK 482 +EK Sbjct: 493 LEK 495 >gi|75076808|sp|Q4R7R9|QRSL1_MACFA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|67967611|dbj|BAE00288.1| unnamed protein product [Macaca fascicularis] gi|67968994|dbj|BAE00853.1| unnamed protein product [Macaca fascicularis] Length = 528 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 200/493 (40%), Positives = 293/493 (59%), Gaps = 27/493 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR NG + DL+GI Sbjct: 13 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFLCAASIGTD 179 +GPV +PW + K P + S + F C A++G+D Sbjct: 132 DGIFGPVKNPWSYSKQYREKRKQNPHSKNEDSDWLITGGSSGGSAAAVSAFTCYAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L A+AG D Sbjct: 192 TGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPD 251 Query: 240 ECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T V+ P+ P +L + + +GIPKEY + LS + W + + GA Sbjct: 252 PKDSTTVHDPINKPFMLPSL-ADVSKLCIGIPKEYLIPELSSEVRSLWSKAADLFESEGA 310 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFG 356 K++E+SLPHT Y++ Y+++ +E +SN+AR+DG++YG R + E MY TR GF Sbjct: 311 KVLEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLQYGHRCDINVSTEAMYAATRREGFN 370 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 V+ RI+ G + L Y++++++A+K+R LI DF AF GVDV+LTPTT + A P Sbjct: 371 DVVRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPY 430 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 KE+N + S +D+FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L Sbjct: 431 LEFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQL 487 Query: 474 FSVGQIIEKEAGY 486 +V + EK+ + Sbjct: 488 LTVAKWFEKQVQF 500 >gi|289168499|ref|YP_003446768.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus mitis B6] gi|288908066|emb|CBJ22906.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus mitis B6] Length = 488 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ + +NA+I + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSRETAINAFITIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T I T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTNSILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|153956068|ref|YP_001396833.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium kluyveri DSM 555] gi|146348926|gb|EDK35462.1| GatA [Clostridium kluyveri DSM 555] Length = 491 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 201/472 (42%), Positives = 300/472 (63%), Gaps = 11/472 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 +D +++++IS E+ +Y+ ++ + ++ AY+ V ++ A+E DK+I G+ L Sbjct: 9 KDMIKNREISVEEIARTYLDRVDEVDGKLGAYLYVASEGLLQKAKELDKKISRGEILGKL 68 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD + + + S +L G+ Y++ V +K+ + +++GK NMDEFAMGS Sbjct: 69 FGIPISVKDNISVENMQNTCASRMLTGYISPYDAHVVEKIKFHQGIIIGKTNMDEFAMGS 128 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S +PW PGGSSGGS+ +VA A SIGTDTGGSIRQPASF Sbjct: 129 STENSSIKLSRNPWDL-----NRVPGGSSGGSAISVAAGEAALSIGTDTGGSIRQPASFC 183 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G ++F +LDQ G I V D A+L + I+G D+ D T ++ VP Sbjct: 184 GVVGLKPTYGRISRYGAVAFGSTLDQIGTIAADVEDCALLTECISGMDKRDFTTADMEVP 243 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 Y ++L + I+GM +GIPKEY + L+ + K+ ++ I LK+ GA+I E S+P ++YAL Sbjct: 244 KYSKSLSKDIKGMRIGIPKEYFGEGLNDKVRKSVEEAILVLKENGAQIKECSIPLSEYAL 303 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEASSNLAR+DG+RYG R + KD +++Y +RS G G EVK RI++GTYVL Sbjct: 304 AAYYIIASAEASSNLARFDGIRYGYRSKNFKDAVDIYFKSRSEGLGSEVKRRIVLGTYVL 363 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S YD +Y +A K+R LI+ F + ++ I++PT PT+AF + +E M Sbjct: 364 SEGYYDDYYKKALKVRKLIRNQFEDIMKE-FHAIISPTCPTTAFKI--DEKKEDVMAMYL 420 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D++TV N+ G+PAIS+P + + +P+GLQ++ FRE LF+V E+ Sbjct: 421 SDIYTVPANITGIPAISIPCGMVD-GLPVGLQIMSGYFRENILFNVAYSFEQ 471 >gi|262368933|ref|ZP_06062262.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter johnsonii SH046] gi|262316611|gb|EEY97649.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Acinetobacter johnsonii SH046] Length = 492 Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 220/479 (45%), Positives = 312/479 (65%), Gaps = 12/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ +++ E + L S+ EL + Y++ I ++Q+ +Y+ V A++A A A+ +D Sbjct: 1 MTDLHRLSIRELSEGLAGAKFSSRELTEHYLKRIAKLDTQVKSYVTVTAEQALAQADAAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G A L G+PI KD F T+GI T A S +LD F Y++TV K G V LG Sbjct: 61 AAIKAGTATALTGVPIAHKDIFCTQGIKTTAGSKMLDNFISPYDATVVAKGKAAGLVTLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+NMDEFAMGS++E S+YG +PW PGGSSGGS+AAVA L + GTDT Sbjct: 121 KVNMDEFAMGSTSENSFYGATANPWNL-----GHVPGGSSGGSAAAVAADLAPFATGTDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G G+KP+YGR SR G+I++A SLDQ G + R+ D A L+ +AG+D Sbjct: 176 GGSIRQPASFCGLTGLKPSYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDA 235 Query: 241 CDATCVNLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T V V DY L+ +IQG+ +GIPK+Y + L + ++ + L++ GA Sbjct: 236 KDSTSVEKDVDDYVANLNGTAIQGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAT 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 +VEI L T+ +P YY+I+PAEASSNL+RYDGVRYG R E D++++Y+ +RS GFG Sbjct: 296 LVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRAESPVDLMDLYKRSRSEGFGA 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ RI+IGTY LS+ YD++Y++A+K+R LI++DF +AFE VDVI P PT+A+ +G Sbjct: 356 EVQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFES-VDVIAAPAAPTTAYKIG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N + D++T+AVN+AGLPAI+ P + +P+GLQLIG + E L SV Sbjct: 415 A---NLSPVEMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSV 470 >gi|284032784|ref|YP_003382715.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Kribbella flavida DSM 17836] gi|283812077|gb|ADB33916.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kribbella flavida DSM 17836] Length = 501 Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 213/489 (43%), Positives = 308/489 (62%), Gaps = 18/489 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L E + + + ++S+VE+ +++ I + ++A++ V ++ A A A D Sbjct: 1 MSDLTRKTAVELSELMTAGEVSSVEITQAHLDRIGAVDGAVHAFLHVDSEGALAQAAAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+P+ +KD G+ T A S +L+G+RP Y++TV ++L G V+L Sbjct: 61 SRRAAGEELGPLAGVPLALKDVLTQDGVPTTAGSKMLEGWRPPYDATVVRRLKAAGVVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG +PW PGGS GGSSAA+A + +IGTD Sbjct: 121 GKTNMDEFAMGSSTENSAYGTTHNPWDL-----NRIPGGSGGGSSAALAAYEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP +FTGTVG+KPTYG SR G+I+ A SLD G RT D+A+L + IAG+D Sbjct: 176 TGGSIRQPGAFTGTVGVKPTYGGTSRYGLIALASSLDTPGPCARTTLDAALLHEVIAGHD 235 Query: 240 ECDATCVNLPVP---DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T ++ PVP D R D + G+ +G+ KE + P ++ + + + L G Sbjct: 236 PMDSTSIDQPVPAVVDAARRAD--VAGLRIGVVKELGGEGYQPGVEARFHEAVELLTKLG 293 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSI 353 A++VE+S PH +YALPAYY+I P+EASSNLA++D +RYGLRV G++ E + TR Sbjct: 294 AEVVEVSCPHFEYALPAYYLILPSEASSNLAKFDAMRYGLRVGDNGENSAEKVMSLTREA 353 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GT+ LSS YD++Y +A+K+RTLI RDFT A+EQ VDV+++P TPT+A Sbjct: 354 GFGAEVKRRIMLGTHALSSGYYDAYYGQAQKVRTLIARDFTRAYEQ-VDVLVSPATPTTA 412 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F +G ++ +M ND+ T+ N+AG A S P L E +P+G ++ R++ Sbjct: 413 FAIGDRIDDPIAM--YKNDLCTIPSNLAGNAAASFPCGLADEDGLPVGFHVMAPVMRDDL 470 Query: 473 LFSVGQIIE 481 L+ VG +E Sbjct: 471 LYQVGGALE 479 >gi|51893959|ref|YP_076650.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Symbiobacterium thermophilum IAM 14863] gi|81610384|sp|Q67KJ2|GATA_SYMTH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|51857648|dbj|BAD41806.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Symbiobacterium thermophilum IAM 14863] Length = 488 Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 210/466 (45%), Positives = 296/466 (63%), Gaps = 12/466 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR--DLEGIPIG 77 ++SAVE+ +S + I + A+I V A A++ D R GD L G+PI Sbjct: 15 ELSAVEIAESALSRIAQVEPAVGAFITVAADHVIERAKKLDARRKAGDTELGPLAGVPIA 74 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD T G+ T S IL G+ +++TV ++L GA+++GK NMDEFAMGSS E+S Sbjct: 75 VKDNICTSGMETTCASRILKGYVSPFDATVVERLRAAGAMIIGKANMDEFAMGSSGESSA 134 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW + PGGSS GS+AAVA ++GTDTGGSIRQPA+FTG VG+K Sbjct: 135 FGVTRNPWDL-----ERVPGGSSSGSAAAVAAGEAPLALGTDTGGSIRQPAAFTGIVGLK 189 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYG SR G+++FA SLDQ G + R V D A L + IAG D DAT P + Sbjct: 190 PTYGYVSRYGVVAFASSLDQVGPMGRDVEDVARLFEVIAGPDRRDATNAGRTPPALKFGG 249 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + S+ G+ +G+PKE + P + ++ I+ L++ GA + E SLP T+YAL AYY+I Sbjct: 250 EPSLSGVRLGVPKELLGPGIDPGVKARVEEAIAQLEELGATVEECSLPSTEYALSAYYVI 309 Query: 318 SPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + AEASSNLAR+DGVRYG R + + EMY TR GFG EVK RIM+GTYVLS+ YD Sbjct: 310 AVAEASSNLARFDGVRYGYRAAQAGGLHEMYSKTRGEGFGTEVKRRIMLGTYVLSAGHYD 369 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 ++Y RA+++RTL+ RDF AFE+ D ++TPTTP +A+ +G++ ++ SM D+ T+ Sbjct: 370 AYYRRAQQVRTLVVRDFERAFER-YDALVTPTTPFTAWKIGEKVDDPVSM--YLGDICTI 426 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 VN+AGLPA+SVP + +P+G+QLIG+PF + + + +K Sbjct: 427 PVNLAGLPAVSVPCGFVD-GLPVGMQLIGKPFADTQILQIAWAYQK 471 >gi|330832191|ref|YP_004401016.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis ST3] gi|329306414|gb|AEB80830.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus suis ST3] Length = 488 Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 209/486 (43%), Positives = 302/486 (62%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E D L K+ISA+EL + ++ I++ ++A++ + A A A D++ Sbjct: 3 FNNKTIDELHDLLVKKEISALELTKATLEDIKSREGAVDAFLTITEDAALAQAAALDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D + GIP+ +KD +TKGI T A S +L + P +++T + + +++GK N Sbjct: 63 IDAD-NVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVSQAYAKDMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG SNE S + P + W D T PGGSSGGS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSNENSAFKPTKNAW---DQTK--VPGGSSGGSAAAVAAGQSRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL I+G+D DA Sbjct: 177 IRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGHDVKDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + D+ + Q I+GM + +PKEY + + P + +T + L+ GA I E+S Sbjct: 237 TSTINEIADFTSKIGQDIKGMKIALPKEYMGEGIDPQVKETILKAAKHLESLGAIIEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y TRS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDATNLEEIYVKTRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD+ + +A ++RTLI +DF + F D+IL PT PT AF G + N Sbjct: 357 IMLGTFSLSSGYYDACFKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPTVAF--GLDTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP +S+PA E +P+GLQLIG + EET++ V E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGLSIPAGFVE-GLPVGLQLIGPKYSEETIYQVAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|297566610|ref|YP_003685582.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Meiothermus silvanus DSM 9946] gi|296851059|gb|ADH64074.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Meiothermus silvanus DSM 9946] Length = 499 Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 208/466 (44%), Positives = 293/466 (62%), Gaps = 11/466 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R++ S E+ + Y++ I +SQ+ A++ A A + ++R+ G+ L G+P Sbjct: 29 VRNRSTSPTEVTEHYLKRITRLDSQIQAFLRT-NPAALEEARQVERRMAAGEDLPLAGVP 87 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD T+G+ T S +L+ F P Y +TV Q+L GAV+LGK N+DEFAMGSS E Sbjct: 88 IALKDNICTRGLETTCASRMLEHFVPPYSATVAQRLCSAGAVILGKTNLDEFAMGSSTEF 147 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S +GP +PW PGGSSGGS+AAVA L ++G+DTGGS+RQPA+ G G Sbjct: 148 SAFGPTRNPWDLGR-----VPGGSSGGSAAAVAADLAPLALGSDTGGSVRQPAALCGVYG 202 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KPTYGR SR G+++FA SLDQ G + R+VRD A+L+ I YD D+T + P + Sbjct: 203 FKPTYGRVSRYGLVAFASSLDQIGPLGRSVRDVALLMDVIGSYDRMDSTSLEAQ-PHFTA 261 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL+ QG T+GI KE + + K ++ L+ G + VE+S+P +YAL YY Sbjct: 262 ALEAHPQGFTIGIVKEAIQVGNTEGVVKALERFREVLEGQGVRFVEVSIPSLEYALATYY 321 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 ++ +EASSNLARYDG YGLRVEG DI E TR+ GFG EVK RI++GT+ LSS Y Sbjct: 322 LVCTSEASSNLARYDGTLYGLRVEGADITETMMKTRAAGFGPEVKRRILMGTFALSSGYY 381 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 D++Y RA + R +K DF AF Q DV+LTPT+P AFPLG + + +M +D+ T Sbjct: 382 DAYYGRALRARARLKADFEMAFAQA-DVLLTPTSPFPAFPLGAKLEDPIAM--YLSDIDT 438 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 VA+N+ GLPA+S+PA E +P+G+QL+G+ +E LF++ E Sbjct: 439 VAINLVGLPALSIPAGF-ESGLPVGVQLVGKALEDERLFTLANAFE 483 >gi|171321049|ref|ZP_02910033.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia ambifaria MEX-5] gi|171093684|gb|EDT38832.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia ambifaria MEX-5] Length = 523 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 213/499 (42%), Positives = 309/499 (61%), Gaps = 23/499 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A+ +D + Sbjct: 1 MHAKSLTELRAALAAKECSAVELAQLYLKRIDAAR-DLNAFVHVDPDLTLAQAKAADAEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ARGAGGALTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +G V +PW + PGGSSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGAVKNPWDT-----NAVPGGSSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A++G+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSGFDERDS 234 Query: 244 TCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + D+ R L Q + G+ +G+P EY D L+ + + + + Sbjct: 235 TSLEREDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGDGLADDVRASIDAALKQYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ LG + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFN 471 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + V ++ + + Sbjct: 472 EARMLQVADAFQRATDWHK 490 >gi|119026476|ref|YP_910321.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium adolescentis ATCC 15703] gi|118766060|dbj|BAF40239.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium adolescentis ATCC 15703] Length = 511 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 211/484 (43%), Positives = 311/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++K++S+ ELV++++ IE++ + A+++V A +A A+ D Sbjct: 4 TELVKLSAAEMAAKIKAKEVSSRELVEAHLAVIESAEPSVKAFLKVSADQALEQADAFDA 63 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + ++ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 64 KSDEDKSQMPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 124 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSAAAVAAFEAPLALGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP S TGTVG+KPTYG SR G I+ A SLDQ G +RTV DSA+L + I G+D Sbjct: 179 TGGSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDSALLQEVIGGHD 238 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A + + ++G+ VG+ KE + P + + +G+ L++ Sbjct: 239 KRDSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEEM 298 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA+++E+SLPH Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 299 GAEVIEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYT 358 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE+ VDV++ PT+P Sbjct: 359 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEK-VDVLVGPTSP 417 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ + +M I D+ T+ N+AG+PA+S+PA L + +P+G Q + R+ Sbjct: 418 VTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQRD 475 Query: 471 ETLF 474 E ++ Sbjct: 476 EVMY 479 >gi|261338706|ref|ZP_05966590.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium gallicum DSM 20093] gi|270276260|gb|EFA22114.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bifidobacterium gallicum DSM 20093] Length = 510 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 211/479 (44%), Positives = 300/479 (62%), Gaps = 19/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD--KRII 64 + ++ D +R+K++S+ ELVD+++ IE + + A+++V A++AR A+ D + Sbjct: 8 LTAAQMGDMVRNKEVSSRELVDAHLDVIEAAEPSVQAFLKVAAKEAREQADAYDALRDEE 67 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + L G+PI IKD TKGI T A S IL+G+ P Y++TV ++L +LGK N+ Sbjct: 68 KAELPALAGVPIAIKDMIVTKGIETTAASRILEGWVPPYDATVIERLKAAHMPLLGKTNL 127 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS E S Y +PW + PGGS GGS+AAVA F ++GTDTGGSI Sbjct: 128 DEFAQGSSTEHSAYHNTNNPWDL-----ERVPGGSGGGSAAAVAAFEAPLALGTDTGGSI 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G D D+T Sbjct: 183 RQPGALTGTVGVKPTYGGVSRYGAIAMASSLDQIGPVSRTVLDSALLQEIIGGNDRRDST 242 Query: 245 CVNLP----VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P V + + ++G+ VG+ K+ + + P + + + + L+ GA++V Sbjct: 243 SIPEPPRPMVAAAREGMKRDLKGLKVGLIKQLQGEGFQPGVQARFDEAVKLLEAMGAEVV 302 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYEN----TRSIGF 355 E+S PH +YAL AYYII P+E SSNLARYDG+RYGLRV D+ + N TR GF Sbjct: 303 EVSCPHLEYALGAYYIIMPSEVSSNLARYDGMRYGLRVMPPVDVPQTAANMMSYTREAGF 362 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ YD+ Y A+K+RTLI DF AF+Q DV+++PT+PT+AF Sbjct: 363 GDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFNNAFKQA-DVLVSPTSPTTAFK 421 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G E M NDV T+ N+AG+PA+S+PA L + +P+G Q I R+E ++ Sbjct: 422 FG--EKTEDPMAMYLNDVATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY 478 >gi|326564488|gb|EGE14714.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis 46P47B1] Length = 491 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 217/496 (43%), Positives = 309/496 (62%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A AE +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAELAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y +TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYHATVVDNIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW D+T GSSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPW---DTTRVPG--GSSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + GYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGAFGKSALDCAYLLAPMTGYDP 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT ++ P DY A D + + G +GI + Y L ++K+ + ++ + Sbjct: 236 KDATSISRPSEDYVADILATATDGKPLAGKKIGIAQAYFGAGLDDEVEKSIRAALATYEA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRYENPKDLHDLYTRSRSD 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT+A Sbjct: 356 GFGEEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTAA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLIG+ + E Sbjct: 415 YKLGESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQA-NGLPVGLQLIGKHWAESE 469 Query: 473 LFSVGQIIEKEAGYFR 488 L + I + + + Sbjct: 470 LLTTAHIYQANTKFHK 485 >gi|270293304|ref|ZP_06199513.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. M143] gi|270278153|gb|EFA24001.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. M143] Length = 488 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 204/486 (41%), Positives = 296/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLISKEISATELTQATLEDIKSREKAINAFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKSKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFENVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + + +GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLSVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|212715381|ref|ZP_03323509.1| hypothetical protein BIFCAT_00276 [Bifidobacterium catenulatum DSM 16992] gi|212661687|gb|EEB22262.1| hypothetical protein BIFCAT_00276 [Bifidobacterium catenulatum DSM 16992] Length = 509 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 212/485 (43%), Positives = 310/485 (63%), Gaps = 19/485 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL ++ +E +++SK++S+ ELV+++++ IE + + A+++V ++A A+ D Sbjct: 1 MSELVKLSAAEMAAKIKSKEVSSRELVEAHLEVIEAAEPSIKAFLKVSGEQALEQADAFD 60 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G + Sbjct: 61 SKSDEEKSALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GT Sbjct: 121 LGKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSAAAVAAFEAPLALGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQP S TGTVG+KPTYG SR G I+ A SLDQ G +RTV D+A+L + I G+ Sbjct: 176 DTGGSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDAALLQEVIGGH 235 Query: 239 DECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+ D+T + P P A + + ++G+ VG+ KE + P + + +G+ L++ Sbjct: 236 DKRDSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYEN 349 GA+I E+SLPH Y+L AYYII P+E SSNLARYDG+RYGLRV + M Sbjct: 296 MGAEITEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAY 355 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AF++ VDV++ PT+ Sbjct: 356 TREAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFDK-VDVLVGPTS 414 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P +AF G++ + +M I D+ T+ N+AG+PA+S+PA L + +P+G Q + R Sbjct: 415 PVTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQR 472 Query: 470 EETLF 474 +E ++ Sbjct: 473 DEVMY 477 >gi|254182232|ref|ZP_04888829.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1655] gi|184212770|gb|EDU09813.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia pseudomallei 1655] Length = 496 Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 216/493 (43%), Positives = 310/493 (62%), Gaps = 23/493 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + Sbjct: 1 MHAKSLTELRAALDAKECSAVELAQHYLKRIDAAR-DLNAFVHVDAELTLAQAKAADAAL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG+A L G+PI KD F T+G + A S +L + +++TV +L G V LGK N Sbjct: 60 ANGEAGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSSNE S +GPV +PW + SSGGSSAAVA L A+ GTDTGGS Sbjct: 120 MDEFAMGSSNENSAFGPVKNPWDTSAVPGG-----SSGGSSAAVAARLAPAATGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPASF G GIKPTYG SR G+I+FA SLDQ G + R+ D A+LL A+AG+DE D+ Sbjct: 175 IRQPASFAGVTGIKPTYGCVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERDS 234 Query: 244 TCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 T + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 235 TSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRAAIDAALKTYE 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ Sbjct: 295 ALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ P +PT Sbjct: 355 EGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIMGPASPTV 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFR 469 A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F Sbjct: 414 AWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFD 471 Query: 470 EETLFSVGQIIEK 482 E + V ++ Sbjct: 472 EARMLQVADAFQR 484 >gi|83748647|ref|ZP_00945665.1| probable Glu-tRNA (Gln) amidotransferase subunit A [Ralstonia solanacearum UW551] gi|207741936|ref|YP_002258328.1| glutamyl-trna(gln) amidotransferase subunit a (glu-adtsubunit a) protein [Ralstonia solanacearum IPO1609] gi|83724691|gb|EAP71851.1| probable Glu-tRNA (Gln) amidotransferase subunit A [Ralstonia solanacearum UW551] gi|206593322|emb|CAQ60249.1| glutamyl-trna(gln) amidotransferase subunit a (glu-adtsubunit a) protein [Ralstonia solanacearum IPO1609] Length = 495 Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 224/482 (46%), Positives = 313/482 (64%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +KD+SAVEL Y+ IE + + +NA++ V A+ A A+ +D RI G A L GI Sbjct: 12 QLAAKDVSAVELARHYLSRIE-ARADLNAFVHVDAEATLAQAQAADARIAAGGAGPLAGI 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +LDG+ +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLDGYVSPFDATVVERLAAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S++GPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSHFGPVKNPWNV-----GHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARDSTSLEPGRGGDA 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L Q ++ G+ +G+P+EY L+ + + ++ L+ GA +V+ Sbjct: 246 EDFGRLLGQPLEGADAARPLAGLRIGLPQEYFGAGLADDVRAAVRAALAELEKLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY +R+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKSRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF+Q DVI+ P PT A+ LG++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFRNAFQQ-CDVIMGPVAPTVAWKLGEKT 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPLQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEETRMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|326565671|gb|EGE15834.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis 12P80B1] Length = 492 Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 216/489 (44%), Positives = 306/489 (62%), Gaps = 19/489 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A AE +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAELAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y++TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFISPYDATVVDNIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW D+T SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPW---DTTRVPGG--SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + GYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGAFGKSALDCAYLLAPMTGYDP 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT ++ P DY A D + + G +GI + Y L ++K+ + ++ + Sbjct: 236 KDATSISRPSEDYVADILATATDGKPLAGKKIGIAQAYFGAGLDDEVEKSIRAALATYEA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRYENPKDLHDLYTRSRSD 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT+A Sbjct: 356 GFGEEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTAA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLIG+ + E Sbjct: 415 YKLGESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQA-NGLPVGLQLIGKHWAESE 469 Query: 473 LFSVGQIIE 481 L I + Sbjct: 470 LLKTAHIYQ 478 >gi|312144159|ref|YP_003995605.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halanaerobium sp. 'sapolanicus'] gi|311904810|gb|ADQ15251.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halanaerobium sp. 'sapolanicus'] Length = 480 Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 221/481 (45%), Positives = 300/481 (62%), Gaps = 22/481 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRI 63 + + E +D+L + + E+ ++ I ++ +YI + +A+K+ A EE +++ Sbjct: 6 LTIHELKDKLNKGETTVAEIRKAFDDRIAAVEDKVKSYITLTDDLAEKSAAKYEEKKEQL 65 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 L GIPI +KD +T+ I T S +L ++P + +TV KL D GA+++GK N Sbjct: 66 -------LAGIPIAVKDNISTEAIKTSCASKVLKNYKPPFNATVIDKLDDAGALIIGKTN 118 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGSS E S + +PW PGGSSGGS+AAVA CAA++G+DTGGS Sbjct: 119 MDEFAMGSSTENSAFFNTNNPWNL-----NHAPGGSSGGSAAAVAAGECAAALGSDTGGS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPAS+ G VG+K TYG SR G+++FA SLDQ G IT+ V D AI+ I GYDE D+ Sbjct: 174 IRQPASYCGVVGLKLTYGMVSRYGLVAFASSLDQIGPITKDVEDCAIMTNVITGYDEKDS 233 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T V DY + L + + GM +GIP+EY LD+ D + L+ AGA++ ++ Sbjct: 234 TSVEDKAEDYRKYLKKDVSGMKIGIPEEYFNLDFDQEVKDSVL-AAVKELEKAGAEVEKV 292 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 + YAL AYYII PAEASSNLARYDGVRYGLR E D+ M+ NTRS GFG EVK Sbjct: 293 HITDAAYALAAYYIIGPAEASSNLARYDGVRYGLRSEEADDVKTMFFNTRSEGFGDEVKR 352 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI+IGTY LSS YD++YL+A+K+RTLIK DF F D+I+TPT PT+A LG + Sbjct: 353 RIVIGTYALSSGYYDAYYLKAQKVRTLIKDDFDRIFND-FDLIVTPTAPTTAIELGTK-- 409 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S + Y D+FTV +N+AG+PA+S+P MP+GLQLIG F E + +E Sbjct: 410 -SDPLEMYYTDIFTVPINIAGVPAMSIPCGFDSNNMPIGLQLIGPHFGEGKIIQAAYTLE 468 Query: 482 K 482 K Sbjct: 469 K 469 >gi|322374845|ref|ZP_08049359.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. C300] gi|321280345|gb|EFX57384.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptococcus sp. C300] Length = 488 Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 297/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSREKAINAFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRADDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFENVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|296127394|ref|YP_003634646.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brachyspira murdochii DSM 12563] gi|296019210|gb|ADG72447.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brachyspira murdochii DSM 12563] Length = 482 Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 202/480 (42%), Positives = 304/480 (63%), Gaps = 12/480 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEES 59 EL +++ + R++L++K+I A LV+S I+ IE + +++AY+EV +A A+++ Sbjct: 2 ELQQLSIIQIREKLKNKEIDAPTLVESIIKRIEEDDKREDKIHAYLEVFKDEALEQAKKA 61 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +RI NG+ L G+P+ IKD K A S +L+G++ Y + Q+L DNGA+++ Sbjct: 62 QERINNGEDLPLLGVPLAIKDNLCYKDHLMTASSKMLEGYKAPYTAPTVQRLIDNGAIII 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ NMDEFAMG + ETS YG +P + PGGSSGGS+AAVA A++G+D Sbjct: 122 GRTNMDEFAMGGTTETSNYGITRNPRNR-----AYVPGGSSGGSAAAVAADFAFAALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYGR RLG I+ A SLDQ G +T+ V+D+A++ K IAG+D Sbjct: 177 TGGSIRQPASFCGIVGVKPTYGRVPRLGCIAMASSLDQVGPLTKDVKDAALMTKIIAGFD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAK 298 ++T +N+PVPDY ALD +I+GM +G+ KE Y D ++ + + I LKD GA+ Sbjct: 237 PKESTTLNIPVPDYLSALDGNIKGMKIGLAKEYYDTDLIASDVKENIMNAIGRLKDQGAE 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 IV+ISLP+ +Y Y + E +SN+ RYDG+RYG +G ++ E Y +RS+G Sbjct: 297 IVDISLPNAKYGSRVYTAVMTVEVASNMGRYDGIRYGYHPKGDFNLDEYYYTSRSVGLAF 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E + RI+ GT + R + SHY A K+R L++ DF AF + VDVI++P++P +A LG Sbjct: 357 ETRARILFGTLMTGKRFFYSHYQHALKVRKLMQMDFDNAF-KNVDVIISPSSPVTAGLLG 415 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ + D +T +N+ GLPA+SVP + MP+G+Q I + F E +F + Sbjct: 416 TRDQTDSALSFL-ADSYTSNINLVGLPAMSVPCGYDKNNMPIGIQFITKQFNETDMFRMA 474 >gi|296484127|gb|DAA26242.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Bos taurus] Length = 526 Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 205/491 (41%), Positives = 296/491 (60%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGQITPTELCQRCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKKGHSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW---------RSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +GPV +PW R +S ++ GGSSGGS+AAV+ F C A++G+D Sbjct: 132 DGIFGPVKNPWSYSKQYREKRKQNSHSENEDSNWLITGGSSGGSAAAVSAFTCFAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KP+YG SR G+I S+D GI+TR V D+A +L +AG+D Sbjct: 192 TGGSTRNPAAHCGVVGLKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAATVLGVLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + PV + + + +GIPKEY LS + W + + + GAK+ Sbjct: 252 PKDSTTIQDPVKPFTLPSLTDVSKLCIGIPKEYLTPELSSEVQSLWSKAANLFESEGAKV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E+SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF Sbjct: 312 TEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLEYGHRCDSDVSTEAMYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 V+ RI+ G + L Y++++++A+K+R LI DF F GVDV+LTPTT + A P Sbjct: 372 VRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNVFNSGVDVLLTPTTLSEAVPYTE 431 Query: 418 --KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 KE+N + S +D+FT AVNMAGLPA+SVP AL + +P+GLQ IG+ F ++ L Sbjct: 432 FIKEDNRTRSA---QDDIFTQAVNMAGLPAVSVPVALSSQGLPIGLQFIGRAFCDQQLLI 488 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 489 VAKWFEKQVQF 499 >gi|296113802|ref|YP_003627740.1| aspartyl/glutamyl(asn/Gln)-tRNA amidotransferase subunit A [Moraxella catarrhalis RH4] gi|295921496|gb|ADG61847.1| aspartyl/glutamyl(asn/Gln)-tRNA amidotransferase subunit A [Moraxella catarrhalis RH4] Length = 492 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 216/489 (44%), Positives = 305/489 (62%), Gaps = 19/489 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A AE +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAELAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y +TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYHATVVDNIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW D+T SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPW---DTTRVPGG--SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + GYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGAFGKSALDCAYLLAPMTGYDP 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT ++ P DY A D + + G +GI + Y L ++K+ + ++ + Sbjct: 236 KDATSISRPSEDYVADILATATDGKPLAGKKIGIAQAYFGAGLDDEVEKSIRAALATYEA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSD 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT+A Sbjct: 356 GFGEEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTAA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLIG+ + E Sbjct: 415 YKLGESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQA-NGLPVGLQLIGKHWAESE 469 Query: 473 LFSVGQIIE 481 L I + Sbjct: 470 LLKTAHIYQ 478 >gi|148993978|ref|ZP_01823348.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP9-BS68] gi|168488126|ref|ZP_02712325.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae SP195] gi|225858288|ref|YP_002739798.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae 70585] gi|254790404|sp|C1C5H2|GATA_STRP7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|147927567|gb|EDK78594.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP9-BS68] gi|183573189|gb|EDT93717.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae SP195] gi|225722029|gb|ACO17883.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Streptococcus pneumoniae 70585] gi|301793675|emb|CBW36060.1| glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae INV104] gi|332075280|gb|EGI85750.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Streptococcus pneumoniae GA17570] Length = 488 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 202/486 (41%), Positives = 297/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ +N+++ + ++A A+ D+ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ + L GIP+ +KD +T GI T A S +L + P +++T G +++GK N Sbjct: 63 IDAN-NVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDTKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|319790984|ref|YP_004152624.1| glutamyL-tRNA(gln) amidotransferase, a subunit [Variovorax paradoxus EPS] gi|315593447|gb|ADU34513.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Variovorax paradoxus EPS] Length = 497 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 214/490 (43%), Positives = 310/490 (63%), Gaps = 20/490 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ M V L + +SAVE +++ ++ S + +++V + A A ++D Sbjct: 6 QLHQMGVVALAKALAERKVSAVEASQAFLGRMKAHES-LGTFVDVNEEVTLAQARKADAL 64 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + G+A L G+PI KD F T T A S +L G+R +++TV ++L + GAV LGKL Sbjct: 65 LAAGNAPALAGVPIAHKDIFVTTDFATTAGSKMLAGYRSPFDATVVRRLAEAGAVTLGKL 124 Query: 123 NMDEFAMGSSNETSYYG--------PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 + DEFAMGS+NE PV +PW + D+ PGGSSG S+AAVA L A Sbjct: 125 SCDEFAMGSANENVAVPAVGHDKAVPVRNPW----NRDRI-PGGSSGASAAAVAARLAPA 179 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + GTDTGGSIRQPASF G GIKPTYGR SR G+++FA SLDQAG + R+ D A+LL A Sbjct: 180 ATGTDTGGSIRQPASFCGVTGIKPTYGRASRYGMVAFASSLDQAGPMARSAEDCALLLSA 239 Query: 235 IAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 G D + D+T ++ P D+ RAL+ S++G+ +G+PKE+ + ++P + ++ + Sbjct: 240 FCGPDLDRDSTSIDKPAEDFGRALNDSLEGLRIGVPKEFFGEGVAPGVRAAIDAALAQYE 299 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRS 352 GAK VE+SLP T+ ++P YYI++ AEASSNL+R+DGV++G R + KD+ +MYE TR+ Sbjct: 300 KLGAKRVEVSLPRTELSIPVYYILAAAEASSNLSRFDGVKFGHRAKQYKDLSDMYEKTRA 359 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTYVLS YD++YL+A+K+R +I DF +A +Q DVI P PT+ Sbjct: 360 EGFGDEVKRRIMIGTYVLSHGYYDAYYLQAQKVRRMIADDFQQALKQ-CDVIAGPAAPTT 418 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A+ +G E+ + D+FT+ ++AGLP +SVPA + MP+GLQLIG F E Sbjct: 419 AWKIG--EHGDDPVADYLADIFTLPASLAGLPGMSVPAGF-DGGMPVGLQLIGNYFGEAK 475 Query: 473 LFSVGQIIEK 482 L + ++ Sbjct: 476 LLNAAHRFQQ 485 >gi|315612612|ref|ZP_07887525.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis ATCC 49296] gi|315315593|gb|EFU63632.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sanguinis ATCC 49296] Length = 488 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 202/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + + + L SK+ISA EL + ++ I++ + +NA++ + ++A A A+ D+ Sbjct: 3 FNNKTIEDLHNLLVSKEISATELTQATLEDIKSRETAINAFVTIAEEQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T I T A S +L + P +++T G +++GK N Sbjct: 63 IDAD-NVLSGIPLAVKDNISTDSILTTAASKMLYNYEPIFDATAVANAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAV+ S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHNK-----VPGGSSSGSAAAVSSGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+G+ + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGIKIALPKEYLGEGIDPEVKETILSAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAN-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|114052448|ref|NP_001039801.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Bos taurus] gi|122135298|sp|Q29RP9|QRSL1_BOVIN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog; AltName: Full=Glutaminyl-tRNA synthase-like protein 1 gi|88954303|gb|AAI14079.1| Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Bos taurus] Length = 526 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 205/492 (41%), Positives = 296/492 (60%), Gaps = 24/492 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 L+ I+ EL + I+ + +NAYI V + A AEES+KR G + DL+G Sbjct: 12 ELKQGQITPTELCQRCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKKGHSLGDLDG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 71 IPIAVKDNFSTSGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGS 130 Query: 134 ETSYYGPVISPW---------RSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GPV +PW R +S ++ GGSSGGS+AAV+ F C A++G+ Sbjct: 131 TDGIFGPVKNPWSYSKQYREKRKQNSHSENEDSNWLITGGSSGGSAAAVSAFTCFAALGS 190 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS R PA+ G VG+KP+YG SR G+I S+D GI+TR V D+A +L +AG+ Sbjct: 191 DTGGSTRNPAAHCGVVGLKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAATVLGVLAGH 250 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+T + PV + + + +GIPKEY LS + W + + + GAK Sbjct: 251 DPKDSTTIQDPVKPFTLPSLTDVSKLCIGIPKEYLTPELSSEVQSLWSKAANLFESEGAK 310 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQ 357 + E+SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF Sbjct: 311 VTEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLEYGHRCDSDVSTEAMYAATRREGFND 370 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 V+ RI+ G + L Y++++++A+K+R LI DF F GVDV+LTPTT + A P Sbjct: 371 VVRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVNVFNSGVDVLLTPTTLSEAVPYT 430 Query: 418 ---KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 KE+N + S +D+FT AVNMAGLPA+SVP AL + +P+GLQ IG+ F ++ L Sbjct: 431 EFIKEDNRTRSA---QDDIFTQAVNMAGLPAVSVPVALSSQGLPIGLQFIGRAFCDQQLL 487 Query: 475 SVGQIIEKEAGY 486 V + EK+ + Sbjct: 488 IVAKWFEKQVQF 499 >gi|38233674|ref|NP_939441.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium diphtheriae NCTC 13129] gi|81564879|sp|Q6NHQ1|GATA_CORDI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|38199935|emb|CAE49603.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium diphtheriae] Length = 494 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 206/492 (41%), Positives = 318/492 (64%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++ +E +++ S+++++ E+ +++ I + + ++A++ V ++A AAA+ D+ Sbjct: 9 SGLTSLSAAELAEKIHSREVTSREVTQAHLDRINDVDGTLHAFLHVGVEEALAAADAVDE 68 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L G+P+ +KD F T T S +L+G+ Y++TVT+K+ + G +L Sbjct: 69 SLDKGEAPASALAGVPLALKDVFVTTDAPTTCASKMLEGYVAPYDATVTKKIREAGIPIL 128 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP ++PW + TPGGS GG+SAA+A IGTD Sbjct: 129 GKTNMDEFAMGSSTENSAYGPTLNPWDI-----ERTPGGSGGGTSAALASGEAPLGIGTD 183 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 184 TGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHD 243 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + DAT VN V A + ++G +G+ K++ + P + + + + + L Sbjct: 244 KYDATSVNRAVAPVVAAAREGARGDLKGTKIGVVKQFDREGYQPGVLEQFHKSVEQLTAQ 303 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR EG D E+ +R Sbjct: 304 GAEIVEVDCPHFDDALAAYYLILPCEVSSNLARFDGMRYGLR-EGDDGTHSAEEVMSLSR 362 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++YL+A+++RTLI +DF A+++ DV+++PTTPT Sbjct: 363 AAGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIAQDFAVAYDK-CDVLVSPTTPT 421 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFR 469 +AF LG++ ++ +M YN D+ T+ +N+AGL +S+P+ L + ++P GLQ++ F+ Sbjct: 422 TAFKLGEKVSDPLAM---YNFDLCTLPLNLAGLCGMSLPSGLAPDSQLPTGLQIMAPAFQ 478 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 479 DDRLYKVGAAFE 490 >gi|325261862|ref|ZP_08128600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5] gi|324033316|gb|EGB94593.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5] Length = 491 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 197/437 (45%), Positives = 272/437 (62%), Gaps = 10/437 (2%) Query: 40 QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDG 98 ++++Y+ + + A A E K+I G+ L G+P+ +KD +G T S IL Sbjct: 39 EIHSYVTLDEEGAMRQAAEVQKQIETGNLTGPLAGVPVAVKDNLCIEGQLTTCSSRILSD 98 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 F+P Y + L GAV++GK NMDEFAMGS+ ETS+YGP +P PGG Sbjct: 99 FKPVYTAEAVMNLQKAGAVIIGKTNMDEFAMGSTTETSFYGPTKNPHNP-----AHVPGG 153 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS AAVA C ++G+DTGGSIRQP+SF G VG+KPTYG SR G+I++ SLDQ Sbjct: 154 SSGGSCAAVAAQECWYALGSDTGGSIRQPSSFCGVVGLKPTYGTVSRYGLIAYGSSLDQI 213 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 G + + V D A +++AIA +D D+T V D+ AL ++G+ +GIP +Y + L Sbjct: 214 GPVAKDVSDCAAVMEAIASHDPKDSTSVKRKDYDFCSALVDDVKGLKIGIPADYMGEGLD 273 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 + + LK+ GA + L QYA+PAYY+I+ AEASSNL R+DGV+YG R Sbjct: 274 KEVKDAVLKAADVLKERGAVVETFDLSLVQYAIPAYYVIASAEASSNLERFDGVKYGYRT 333 Query: 339 EGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 + D L MY+ TRS GFG EVK RIM+G++VLSS YD++YL+A + + LIK+ F AF Sbjct: 334 QDYDGLHNMYKKTRSEGFGAEVKRRIMLGSFVLSSGYYDAYYLKALRTKALIKQAFDRAF 393 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 E DVIL P PT+A LGK ++ M D++TVAVN+AGLP +SVP + + Sbjct: 394 EN-YDVILGPAAPTTAPELGKSLSDPLKM--YLGDIYTVAVNLAGLPGMSVPVGKDSRGL 450 Query: 458 PLGLQLIGQPFREETLF 474 P+G+QLI F+E+TL Sbjct: 451 PIGMQLIASCFQEKTLL 467 >gi|171742051|ref|ZP_02917858.1| hypothetical protein BIFDEN_01155 [Bifidobacterium dentium ATCC 27678] gi|283456822|ref|YP_003361386.1| aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium dentium Bd1] gi|171277665|gb|EDT45326.1| hypothetical protein BIFDEN_01155 [Bifidobacterium dentium ATCC 27678] gi|283103456|gb|ADB10562.1| GatA Aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium dentium Bd1] Length = 511 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 210/484 (43%), Positives = 311/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++K++S+ ELV++++ IE + + A+++V ++A A+ D Sbjct: 4 TELVKLSAAEMAAKVKAKEVSSRELVEAHLDVIEAAEPSVKAFLKVSGEQALEQADAFDA 63 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + A+ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 64 KSDDEKAQLPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 124 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSAAAVAAFEAPLALGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP S TGTVG+KPTYG SR G I+ A SLDQ G +RTV D+A+L + I G+D Sbjct: 179 TGGSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDAALLQEVIGGHD 238 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A + + ++G+ VG+ KE + P + + +G+ L++ Sbjct: 239 KRDSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEEM 298 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA++ E+SLPH+ Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 299 GAEVTEVSLPHSPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYT 358 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE+ VDV++ PT+P Sbjct: 359 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEK-VDVLVGPTSP 417 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ + +M I D+ T+ N+AG+PA+S+PA L + +P+G Q + R+ Sbjct: 418 VTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQRD 475 Query: 471 ETLF 474 E ++ Sbjct: 476 EAMY 479 >gi|326330722|ref|ZP_08197026.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nocardioidaceae bacterium Broad-1] gi|325951563|gb|EGD43599.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nocardioidaceae bacterium Broad-1] Length = 498 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 218/494 (44%), Positives = 315/494 (63%), Gaps = 17/494 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L ++ D L + + ++VEL +++ I + ++A++ + A+ A + A SD Sbjct: 1 MSDLILKTAAQLADALAAGETTSVELTQAHLDRIAAVDGDVHAFLHIDAEGALSQAAASD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R NGDA L+G+PI +KD T G+ T S IL+G+ P Y++TV +K+ G +L Sbjct: 61 ARRANGDALHALDGVPIAVKDVLTTTGLPTTCGSKILEGWVPPYDATVVKKIKGAGLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW+ D+ PGGS GGS+AAVA F ++GTD Sbjct: 121 GKTNMDEFAMGSSTEHSAYGPTKNPWK----LDRI-PGGSGGGSAAAVAAFEAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G+++ A SLDQ G +TRTV DSA+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGSVSRYGLVALANSLDQVGPVTRTVLDSALLHELIGGHD 235 Query: 240 ECDATCVNLPVP---DYERA-LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T PV D RA ++G+ VG+ KE + +P + + + + L Sbjct: 236 PLDSTSTTTPVTGLVDAARAGATGDLKGVKVGVIKELAGEGWAPDVMAKFNESVDILTKL 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRS 352 GA +VE+S P ++A+ AYY+I PAE SSNLA++D +RYGLRV +G E + + +R Sbjct: 296 GADVVEVSTPSFKHAMAAYYLILPAECSSNLAKFDAMRYGLRVTPDGDPSAEDVMKASRD 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LSS YD++Y +A+KIRTLI DF +AFEQ VDV+++PT+P++ Sbjct: 356 AGFGDEVKRRIILGTYALSSGYYDAYYGQAQKIRTLIIEDFKKAFEQ-VDVLVSPTSPST 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREE 471 AFPLG + ++ +M D+ T+ N+AG P ISVPA + + +P+G+QL+ + Sbjct: 415 AFPLGAKLDDPLAM--YMQDLATIPANLAGTPGISVPAGVSDVDGLPVGVQLLAPVLEDA 472 Query: 472 TLFSVGQIIEKEAG 485 L+ VG +E G Sbjct: 473 RLYRVGAALEGAIG 486 >gi|116628318|ref|YP_820937.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus thermophilus LMD-9] gi|122267087|sp|Q03J81|GATA_STRTD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116101595|gb|ABJ66741.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Streptococcus thermophilus LMD-9] Length = 488 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 209/486 (43%), Positives = 294/486 (60%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + I I+ +NA++ V + A A AE D++ Sbjct: 3 FNNKTIEELHNLLVSKEISATELTQATIDDIKAREEAVNAFVTVAEEAALAQAEAIDEKG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP +KD +T GI T A S +L + P +++T +++GK N Sbjct: 63 IDADNL-LSGIPFAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETSYYG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSYYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A LL IA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + + P + +T + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILDAAKHFEKLGATVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R E K++ ++Y NTRS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ AF L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAFDL--DTLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFAQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|306828969|ref|ZP_07462161.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus mitis ATCC 6249] gi|304429147|gb|EFM32235.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus mitis ATCC 6249] Length = 488 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 203/486 (41%), Positives = 298/486 (61%), Gaps = 11/486 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N + E + L SK+ISA EL + ++ I++ + +NA++ + ++A A A+ D+ Sbjct: 3 FNHKTIEELHNLLVSKEISATELTQATLEDIQSRETAINAFVTIAEKQALAQAKAIDEAG 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+ D L GIP+ +KD +T I T A S +L + P +++T G +++GK N Sbjct: 63 IDVD-NVLSGIPLAVKDNISTDSILTTAASKMLYNYEPIFDATAVANAKAKGMIVVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMG S ETS+YG + W PGGSS GS+AAVA S+G+DTGGS Sbjct: 122 MDEFAMGGSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+F G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+ Sbjct: 177 IRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDS 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + + D+ + Q I+GM + +PKEY + ++P + +T + + GA + E+S Sbjct: 237 TSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIAPEVKETIIKAAKHFEKLGAIVEEVS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 LPH++Y + YYII+ +EASSNL R+DG+RYG R + ++ E+Y N+RS GFG EVK R Sbjct: 297 LPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRADDATNLDEIYVNSRSQGFGDEVKRR 356 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GT+ LSS YD++Y +A ++RTLI +DF F D+IL PT P+ A+ L + N Sbjct: 357 IMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFENVFTD-YDLILGPTAPSVAYDL--DSLN 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Sbjct: 414 HDPVAMYLADLLTIPVNLAGLPGISIPAGFVQ-GLPVGLQLIGPKYSEETIYQAAAAFEA 472 Query: 483 EAGYFR 488 Y + Sbjct: 473 TTDYHK 478 >gi|226365936|ref|YP_002783719.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodococcus opacus B4] gi|226244426|dbj|BAH54774.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodococcus opacus B4] Length = 493 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 208/493 (42%), Positives = 319/493 (64%), Gaps = 17/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++ ++ S+++S+VE+ +++ I + ++NA++ V ++A +A+E D Sbjct: 3 ADLTTLDAADLASKIHSREVSSVEVTQAHLDRIAAVDGELNAFLHVAGEQALVSAKEVDS 62 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + GDA L G+P+ +KD F T + T S IL+G+ Y++T+T+KL D G +L Sbjct: 63 SLAAGDAPASPLAGVPLALKDIFTTTDMPTTCASKILEGWIAPYDATLTKKLRDAGIPIL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S YGP +PW D+T PGGS GGS+AA+A +IGTD Sbjct: 123 GKTNLDEFAMGSSTENSAYGPTRNPW---DTTR--IPGGSGGGSAAALASRQAPLAIGTD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 178 TGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVIAGHD 237 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T ++ PV A + +++G+ VG+ KE D P + ++ ++ L + Sbjct: 238 PRDSTSIDAPVRPVVAAAREGAGGNLKGVKVGVVKELHSDSYQPGVISSFDAAVAQLTEL 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSI 353 GA++VE+S P+ +YAL +YY+I P+E SSNLAR+D +RYGLR++ D+ ++ TR+ Sbjct: 298 GAEVVEVSCPNFEYALASYYLILPSEVSSNLARFDAMRYGLRIDQGDMSADQVMAATRAA 357 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIMIGTY LSS YD++Y +A K+RTLI RDF +A+E+ VDV+++PT+P + Sbjct: 358 GFGPEVKRRIMIGTYALSSGYYDAYYGQALKVRTLIARDFDKAYEK-VDVLVSPTSPFTP 416 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREET 472 + LG++ + +M +D+ T+ N+AG A+SVP+ L + +P+GLQ++ +E Sbjct: 417 WKLGEKVGDPLAM--YLSDLCTLPTNLAGHCAMSVPSGLSADDGLPVGLQIMAPALADER 474 Query: 473 LFSVGQIIEKEAG 485 L+ VG E G Sbjct: 475 LYRVGAAYEAARG 487 >gi|326568372|gb|EGE18452.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis BC7] Length = 492 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 216/496 (43%), Positives = 306/496 (61%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A AE +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAELAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y +TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYHATVVDNIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW D+T SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPW---DTTRVPGG--SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + GYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGAFGKSALDCAYLLAPMTGYDP 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT ++ P DY A D + + G +GI K Y L ++K+ + ++ ++ Sbjct: 236 KDATSISRPSEDYVADILATATDGKPLAGKKIGIAKAYFGAGLDDEVEKSIRAALATYEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSD 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT A Sbjct: 356 GFGEEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTVA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + L + + + IY DV+T+ VN+AGLPA+S P +P+GLQLIG+ + E Sbjct: 415 YKLSESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQAN-GLPVGLQLIGKHWAESE 469 Query: 473 LFSVGQIIEKEAGYFR 488 L I + + + Sbjct: 470 LLKTAHIYQSHTDFHQ 485 >gi|306824232|ref|ZP_07457602.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium dentium ATCC 27679] gi|309801759|ref|ZP_07695879.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium dentium JCVIHMP022] gi|304552435|gb|EFM40352.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium dentium ATCC 27679] gi|308221701|gb|EFO77993.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium dentium JCVIHMP022] Length = 511 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 211/484 (43%), Positives = 310/484 (64%), Gaps = 19/484 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL ++ +E ++++K++S+ ELV++++ IE + + A+++V ++A A+ D Sbjct: 4 TELVKLSAAEMAAKVKAKEVSSRELVEAHLDVIEAAEPSVKAFLKVSGEQALEQADAFDA 63 Query: 62 RIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + A+ +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL G +L Sbjct: 64 KSDDEKAQLPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPLL 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFA GSS E S Y +PW + + PGGS GGS+AAVA F ++GTD Sbjct: 124 GKTNLDEFAQGSSTEHSAYQTTHNPWDT-----ERVPGGSGGGSAAAVAAFEAPLALGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP S TGTVG+KPTYG SR G I+ A SLDQ G +RTV D+A+L + I G+D Sbjct: 179 TGGSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDAALLQEVIGGHD 238 Query: 240 ECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D+T + P P A + + ++G+ VG+ KE + P + + +G+ L++ Sbjct: 239 KRDSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEEM 298 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-----GKDILEMYENT 350 GA++ E+SLPH Y+L AYYII P+E SSNLARYDG+RYGLRV + M T Sbjct: 299 GAEVTEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYT 358 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF +AFE+ VDV++ PT+P Sbjct: 359 REAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEK-VDVLVGPTSP 417 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ + +M I D+ T+ N+AG+PA+SVPA L + +P+G Q + R+ Sbjct: 418 VTAFKFGEKTEDPMAMYAI--DITTIPANLAGVPAMSVPAGLSDDGLPVGFQFLAPQQRD 475 Query: 471 ETLF 474 E ++ Sbjct: 476 EAMY 479 >gi|239813300|ref|YP_002942210.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Variovorax paradoxus S110] gi|239799877|gb|ACS16944.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Variovorax paradoxus S110] Length = 495 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 215/490 (43%), Positives = 305/490 (62%), Gaps = 20/490 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ M V++ L + +SAVE ++ ++ S + +++V A A +D Sbjct: 4 ELHQMGVADLAKALAERKVSAVEASQVFLGRMKAHES-LGTFVDVNEDVTLAQARAADAL 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G+A L G+PI KD F T T A S +L G+R +++TV ++L + GAV LGKL Sbjct: 63 IAKGNAPALAGVPIAHKDIFVTTDFATTAGSKMLAGYRSPFDATVVRRLAEAGAVTLGKL 122 Query: 123 NMDEFAMGSSNETSYYG--------PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 + DEFAMGS+NE PV +PW + PGGSSG S+AAVA L A Sbjct: 123 SCDEFAMGSANENVAVPAVGHDKAVPVQNPWNR-----ERIPGGSSGASAAAVAARLAPA 177 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + GTDTGGSIRQPASF G GIKPTYGR SR G+++FA SLDQAG + R+ D A+LL A Sbjct: 178 ATGTDTGGSIRQPASFCGITGIKPTYGRASRYGMVAFASSLDQAGPMARSAEDCALLLSA 237 Query: 235 IAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 G D + D+T ++ P D+ R+L S++G+ +G+PKE+ + ++P + + + Sbjct: 238 FCGPDLDRDSTSLDKPAEDFGRSLGDSLEGLRIGVPKEFFGEGVAPGVRAAIDAALVQYE 297 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRS 352 GAK VE+SLP T+ ++P YYI++ AEASSNL+R+DGV++G R + KD+ EMYE TR+ Sbjct: 298 KLGAKRVEVSLPLTELSIPVYYILAAAEASSNLSRFDGVKFGHRAKQYKDLAEMYERTRA 357 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTYVLS YD++YL+A+K+R +I DF +AF Q D+I P PT+ Sbjct: 358 EGFGDEVKRRIMIGTYVLSHGYYDAYYLQAQKVRRMIADDFQQAFRQ-CDLIAGPAAPTT 416 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A+ +G E+ + D+FT+ ++AGLP +SVPA + MP+GLQLIG F E Sbjct: 417 AWKIG--EHGGDPVADYLADIFTLPASLAGLPGMSVPAGF-DAGMPVGLQLIGNYFGEAK 473 Query: 473 LFSVGQIIEK 482 L + ++ Sbjct: 474 LLNAAHRFQQ 483 >gi|289644230|ref|ZP_06476319.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Frankia symbiont of Datisca glomerata] gi|289505953|gb|EFD26963.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Frankia symbiont of Datisca glomerata] Length = 495 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 219/478 (45%), Positives = 312/478 (65%), Gaps = 18/478 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++SA+E+ + + I + ++NA++ V A A AAA + D+R G+ L G+P+ + Sbjct: 20 ELSALEVTQAALDRIAKVDDRINAFLHVDADGALAAARDVDQRRALGETLGPLAGVPLAL 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F +G+ T S IL+G+ P Y++TV KL G +++GK NMDEFAMGSS E S Y Sbjct: 80 KDVFTARGMPTTCGSRILEGWYPPYDATVVAKLRAAGVIIIGKANMDEFAMGSSTENSAY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW TD+ PGGSSGGS+AAVA F ++GTDTGGSIRQPA+ G VG+KP Sbjct: 140 GPTRNPW----DTDRI-PGGSSGGSAAAVAAFETPIALGTDTGGSIRQPAAVCGLVGVKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL-PVPDYERAL 257 TYG SR G+++F+ SLDQAG + RTV D+A+L AIAG+D D T V L P P A Sbjct: 195 TYGGVSRYGLVAFSSSLDQAGPLARTVTDAALLHAAIAGHDPLDTTSVELAPPPVVAAAA 254 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ +G+ +E D + + + L GA++VE+S PH YALPAYY+I Sbjct: 255 SRDLRGVRIGVVRELSGDGYDIGVRARFSDTLEVLVGLGAEVVEVSCPHFTYALPAYYLI 314 Query: 318 SPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +P+E SSNLAR+D +R+GLRV G D E+ TR IGFG EVK RI++GTY LSS Sbjct: 315 APSECSSNLARFDAMRFGLRV-GDDGEASAEEVMSRTRGIGFGPEVKRRIILGTYALSSG 373 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A+K+RTLI +DF A+E+ VDV+++PTTPT AF LG++ ++ SM +D+ Sbjct: 374 YYDAYYGQAQKVRTLISQDFAAAYER-VDVLVSPTTPTVAFRLGEKVDDPVSM--YLSDL 430 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK--EAGYFRP 489 T+ N+AG PA+S+P L + +P+G Q++ F ++ L+ VG +E EA RP Sbjct: 431 CTIPSNLAGGPAMSLPVGLAD-GLPVGFQIMAPAFADDRLYRVGGALEAALEARRGRP 487 >gi|257069039|ref|YP_003155294.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Brachybacterium faecium DSM 4810] gi|256559857|gb|ACU85704.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Brachybacterium faecium DSM 4810] Length = 501 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 212/467 (45%), Positives = 307/467 (65%), Gaps = 13/467 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++S+ EL +++ I + + A++ V + A ++ E D R G+ L G+P+ + Sbjct: 20 EVSSEELTRAHLDRIAAVDGDLGAFLHVDEEAALTSSREVDSRRAAGEELPALAGVPVAV 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD T+G T A S IL+G+ P Y++T+ QKL G +LGK NMDEFAMGSS ETS + Sbjct: 80 KDVVVTEGQPTTAGSKILEGWIPPYDATLVQKLRAAGLPILGKTNMDEFAMGSSTETSAF 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW D+ PGGS GGS+AAV + +IGTDTGGSIRQP + TGTVG+KP Sbjct: 140 GPTRNPW----DRDRI-PGGSGGGSAAAVGAYEAPLAIGTDTGGSIRQPGAATGTVGVKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY-ERAL 257 TYG SR G+I+ A SLDQAG +TRTV D+A+L + IAG+D D+T + PV + E A Sbjct: 195 TYGSVSRYGLIAMASSLDQAGPVTRTVEDAALLHELIAGHDPLDSTSLPEPVGGFAEAAR 254 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ VG+ +E + +P + + + ++ L+ AGA+IV IS P+ QYAL AYY+I Sbjct: 255 HRDVKGLRVGVIEELEGEGFAPEVRARFTESLAQLEQAGAEIVRISCPNFQYALGAYYLI 314 Query: 318 SPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P+EASSNLA++DG+R+GLRV E + + TR GFG EVK RI++GTY LS+ Sbjct: 315 MPSEASSNLAKFDGMRFGLRVVPEESPTAESVMKATRGAGFGDEVKRRILLGTYALSAGY 374 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y A+K+RTL++RDF AFEQ VDV+ +PT+PT AF LG++ ++ +M ND+ Sbjct: 375 YDAYYGSAQKVRTLVQRDFAAAFEQ-VDVLASPTSPTVAFRLGEKIDDPTAM--YMNDIA 431 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T+ N+AG+P IS+P+ L E +P G+Q + +E L+ VG +E Sbjct: 432 TIPANLAGVPGISLPSGLAEDGLPAGIQFLAPARADERLYRVGGALE 478 >gi|149636140|ref|XP_001512042.1| PREDICTED: similar to Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Ornithorhynchus anatinus] Length = 733 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 207/491 (42%), Positives = 292/491 (59%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L+ +S +EL + I+ + +NAYI V ++A A ES+KR G L+GI Sbjct: 13 LKQGQVSPIELCQRCLSRIKETKF-LNAYITVTEERALKQAAESEKRYEKGQELGVLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD F+T GI T S++L G+ P Y +TV QKL D GAV++GK N+DEFAMGS + Sbjct: 72 PFSVKDNFSTAGIETTCASNMLKGYVPPYNATVVQKLLDQGAVLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPWR-SMDSTDKFTPGGSS--------------GGSSAAVAGFLCAASIGTD 179 +GPV +PW S K +P S GGS+AAVA F C ++G+D Sbjct: 132 DGVFGPVRNPWSYSKQYRGKGSPDSSQEDQEPQWLVAGGSSGGSAAAVAAFTCFVALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KPTYG SR G+I S+D GI+TR V D+AI+L+ +AG+D Sbjct: 192 TGGSTRNPAAHCGVVGLKPTYGLVSRHGLIPLVNSMDVPGILTRCVEDAAIILEVLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V V I + +GIPKEYR + LS W + + AGA++ Sbjct: 252 PKDSTTVQDLVSPLALPSSVDISKLCIGIPKEYRAEGLSCETQAFWTRAADLFQSAGARV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 +E+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R E MY TR GF Sbjct: 312 IEVSLPHTSYSIDCYHVLCTAEVASNMARFDGLEYGHRCNRDVSTEAMYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 V+ RI+ G + L Y+ ++++A+K+R LI DF F GVDV+LTPTT + A P Sbjct: 372 VRGRILSGNFFLLKENYNDYFIKAQKVRRLIANDFIHVFSSGVDVLLTPTTLSDAVPYLE 431 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 KE+N++ S +DVFT AVNMAGLPA++VPAA ++ +P+GLQ IG+ F E+ L + Sbjct: 432 FIKEDNSTRSA---QDDVFTQAVNMAGLPAVTVPAARSKRGLPVGLQFIGRAFCEQQLLT 488 Query: 476 VGQIIEKEAGY 486 V + E+E + Sbjct: 489 VAKWFEQEVRF 499 >gi|293188966|ref|ZP_06607700.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces odontolyticus F0309] gi|292822101|gb|EFF81026.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces odontolyticus F0309] Length = 501 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 212/491 (43%), Positives = 313/491 (63%), Gaps = 18/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + E D L + I++VEL + + I+ ++NA+I V + A A A + D Sbjct: 1 MNELLKKSALELADMLAAGQITSVELTQACLDRIDAIEDRVNAFITVDREGALATAADVD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+PI +KD T+G+ T S IL ++P Y++TVT K+ + G ++ Sbjct: 61 ARRAAGETLHRLAGVPIAVKDNVVTRGLRTTCASKILGDWKPPYDATVTAKIKEAGLPIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +G +PW T++ PGGS GGS+AAVA ++ ++G+D Sbjct: 121 GKTNMDEFAMGSSTEHSAFGATKNPW----DTERI-PGGSGGGSAAAVAAYMVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA TGTVG KPTYG SR G+++ A SLDQ G +TRTV D+A L + I GYD Sbjct: 176 TGGSIRQPAFVTGTVGAKPTYGAVSRFGLVAMASSLDQIGPVTRTVADAAALTELIGGYD 235 Query: 240 ECDATCVNLPVPDYERALDQ-----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+T +N PVP A++ S++G+ VG+ KE + + + + L++ Sbjct: 236 PNDSTSLNEPVPALTEAVESVAAQGSMKGLKVGVVKELSGEGYQKDVIDAFNATVEKLRE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 AGA+IVE+S PH +Y+L AYY+I PAE SSNLAR+DG+RYG+RVE + + T Sbjct: 296 AGAEIVEVSCPHLEYSLGAYYLIMPAEVSSNLARFDGMRYGIRVEPTEGPVTAERVMAAT 355 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GT+VLS+ YD++Y A+K+RTLI+RDF FEQ VDV+++PT P Sbjct: 356 REAGFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLIQRDFDAVFEQ-VDVLVSPTAP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ ++ +M ++Y DV T+ N+AG+P ++VP A+ +P+G Q++ + Sbjct: 415 ETAFKFGEKTSDPLAM-YLY-DVATIPANLAGIPGVNVPNAVSSAGLPIGFQVLAPARGD 472 Query: 471 ETLFSVGQIIE 481 ++ V ++E Sbjct: 473 LVMYKVASLVE 483 >gi|300705539|ref|YP_003747142.1| glutamyl-tRNA(gln) amidotransferase subunit A [Ralstonia solanacearum CFBP2957] gi|299073203|emb|CBJ44561.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Ralstonia solanacearum CFBP2957] Length = 495 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 224/482 (46%), Positives = 312/482 (64%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +KD+SAVEL Y+ IE + + +NA+I V A+ A A+ +D RI G A L GI Sbjct: 12 QLAAKDVSAVELARHYLSRIE-ARADLNAFIHVDAEATLAQAQAADARIAAGGAGPLAGI 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +LD + +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLDSYVSPFDATVVERLAGAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S++GPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSHFGPVKNPWNV-----GHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARDSTSLEPGRGGDA 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L Q ++ G+ +G+P+EY L+ + + ++ L+ GA +V+ Sbjct: 246 EDFGRLLGQPLEGADAARPLAGLRIGLPQEYFGAGLADDVRAAVRAALAELEKLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY +R+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKSRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF+Q DVI+ P PT A+ LG++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFRNAFQQ-CDVIMGPVAPTVAWKLGEKT 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPLQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|89897481|ref|YP_520968.1| hypothetical protein DSY4735 [Desulfitobacterium hafniense Y51] gi|89336929|dbj|BAE86524.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 491 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 209/492 (42%), Positives = 308/492 (62%), Gaps = 13/492 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V + L K++S++EL +Y++ I + ++ A++ V ++A A A D++ Sbjct: 2 QLHTLTVHQLSQLLADKEVSSLELTQAYLERIRQKDHELQAFVTVTGEQALAQARLVDEQ 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L GIP+ ++D T G+ T S +L + P ++TV +L G+V++GK Sbjct: 62 RLGGEELFALAGIPMAVQDNICTAGVKTTCASRMLSHYIPPADATVMGRLRKAGSVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEF +GSS S +P+ + PGGS GG++AAVA A ++G+DTG Sbjct: 122 ANLDEFGIGSSTGHSACPDTRNPFDL-----RAVPGGSGGGAAAAVAAGEAAFALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 G IRQPA+F G +G+KPTYG R G+IS+A SLDQ G R ++D A++LK I G+D Sbjct: 177 GDIRQPAAFCGVIGLKPTYGYVPRTGLISYASSLDQIGPFARDLKDLALILKTICGHDAG 236 Query: 242 DATCVNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T L V D+ +L I+G+ +G+PKEY +SP + Q+ I+ L++ GA+ Sbjct: 237 DSTSALLEVSDFRESLSNDSNDIKGLKIGLPKEYFAAGVSPGVAARLQEAITKLEELGAR 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 VE++LPHT+ A A+Y +S AEASSNLARYDGVRYGLRVEG+D+ M+ TR GFG Sbjct: 297 CVEVTLPHTEVAAAAHYALSCAEASSNLARYDGVRYGLRVEGEDVQNMFMKTRGQGFGSA 356 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK IM+GT+VLSS YD +Y +A K+RTL +DF +AFEQ VD +LTP T T+A K Sbjct: 357 VKRSIMLGTHVLSSAHYDDYYTQALKVRTLNSQDFAQAFEQ-VDCLLTPATLTTAPQ--K 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + S+ +++ T+ N+AGLPA+S+P L E MP+GLQLIG+ F E+TL V Sbjct: 414 SDLAGDSLALVHSHRCTLPANLAGLPALSLPYGLSE-GMPVGLQLIGRHFDEQTLLRVAY 472 Query: 479 IIEKEAGYFRPH 490 +E+ RP Sbjct: 473 TLEQNTDQTRPQ 484 >gi|2492834|sp|Q49091|GATA_MORCA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|1224069|gb|AAA92125.1| glutamyl-tRNAGln amidotransferase subunit A [Moraxella catarrhalis] gi|326567108|gb|EGE17230.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis BC1] Length = 492 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 212/496 (42%), Positives = 303/496 (61%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A A+ +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAKLAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y++TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYDATVVDSIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPWDVQRVPGG-----SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL +AGYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTFGKSALDCAYLLAPMAGYDP 235 Query: 241 CDATCVNLPVPDY------ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT +N P DY + + + G +G+ K Y L ++K+ + ++ ++ Sbjct: 236 KDATSINRPSEDYVADILATKTDGKPLAGKKIGVAKAYFGAGLDSEVEKSIRTALAKYEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSE 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT A Sbjct: 356 GFGAEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTPA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLI + + E Sbjct: 415 YKLGESLDPAS----IYLLDVYTIGVNLAGLPALSHPVGQAN-GLPVGLQLISKHWAESE 469 Query: 473 LFSVGQIIEKEAGYFR 488 L I + + + Sbjct: 470 LLKTAHIYQSHTDFHQ 485 >gi|296128971|ref|YP_003636221.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cellulomonas flavigena DSM 20109] gi|296020786|gb|ADG74022.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cellulomonas flavigena DSM 20109] Length = 505 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 215/491 (43%), Positives = 316/491 (64%), Gaps = 19/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E +RL ++++++VE +++ I+ ++A++ V +A A A + D Sbjct: 1 MTDLTRLTAAELAERLTAREVTSVEATQAHLDRIDAVEPAVHAFLHVADTEALATAADVD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+PI +KD T+G+ T A S IL+G+ P Y++T+ +++ G +L Sbjct: 61 ARRAAGEELHPLAGVPIAVKDVVVTRGLPTTAGSRILEGWVPPYDATLVERIKAAGLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG +PW + PGGS GGS+AAVA + +IGTD Sbjct: 121 GKTNMDEFAMGSSTEHSGYGNTHNPWDL-----ERIPGGSGGGSAAAVAAYEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG+KPTYG SR G+++ A SLDQAG TRTV DSA+L + I G+D Sbjct: 176 TGGSIRQPAAVTGTVGVKPTYGSVSRYGLVALASSLDQAGPCTRTVLDSALLHELIGGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + P Y A + ++G+ VG+ +E + + P + +++ + L+ A Sbjct: 236 PRDSTSLTDPATGYVAAAREGAAGDLRGVRVGVIRELQGEGYQPGVIARFEESLDALRTA 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TR 351 GA IVE+S P YAL AYY+I PAEASSNLA++DG+R+GLRVE + E TR Sbjct: 296 GADIVEVSCPSFAYALAAYYLILPAEASSNLAKFDGMRFGLRVEPSEGPVTAERVMAATR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AFEQ DV+++PT PT Sbjct: 356 GQGFGDEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFAAAFEQ-TDVLVSPTAPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +AF LG++ ++ +M NDV T+ N+AG+P +S+P L + +P+G Q++ P RE+ Sbjct: 415 TAFKLGEKLDDPLAM--YLNDVATIPANLAGVPGMSLPNGLSDDGLPVGFQILA-PARED 471 Query: 472 T-LFSVGQIIE 481 L+ VG +E Sbjct: 472 ARLYRVGAALE 482 >gi|183602745|ref|ZP_02964108.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium animalis subsp. lactis HN019] gi|219683155|ref|YP_002469538.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium animalis subsp. lactis AD011] gi|241191489|ref|YP_002968883.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196894|ref|YP_002970449.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183217983|gb|EDT88631.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bifidobacterium animalis subsp. lactis HN019] gi|219620805|gb|ACL28962.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bifidobacterium animalis subsp. lactis AD011] gi|240249881|gb|ACS46821.1| aspartyl/glutamyl-tRNA amidotransferase subunitA [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251448|gb|ACS48387.1| aspartyl/glutamyl-tRNA amidotransferase subunitA [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177614|gb|ADC84860.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bifidobacterium animalis subsp. lactis BB-12] gi|295794481|gb|ADG34016.1| aspartyl/glutamyl-tRNA amidotransferase subunitA [Bifidobacterium animalis subsp. lactis V9] Length = 514 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 211/486 (43%), Positives = 312/486 (64%), Gaps = 25/486 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ + + LRSK++S+ +LV++ ++ I+ + + A+++V + AA E++D Sbjct: 8 ELVKLSAVQMAELLRSKEVSSRDLVNAELEVIDAAEPTIKAFLKVAGE---AALEQADAF 64 Query: 63 IINGDAR-----DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 DA +L G+PI IKD TKGI T A S IL+G+ P Y++TV +KL Sbjct: 65 DNLSDAEKAELPELAGVPIAIKDMIVTKGIETTAASRILEGWVPPYDATVIEKLKAAHMP 124 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK N+DEFA GSS E S Y +PW + PGGS GGS+AAV+ F ++G Sbjct: 125 LLGKTNLDEFAQGSSTEHSAYQHTANPWDV-----ERVPGGSGGGSAAAVSAFEAPLALG 179 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G Sbjct: 180 TDTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGG 239 Query: 238 YDECDATCV-NLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +D+ D+T + P P + A +++ ++GM +G+ KE + P ++ + + + L+ Sbjct: 240 HDKRDSTSIPQGPRPMAKAAREGMNRDLKGMRIGLVKELGGEGFQPGVEARFNEAVKKLE 299 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYEN--- 349 GA++VE+S P +YAL AYYII P+E SSNLARYDG+RYGLRV KD+ + N Sbjct: 300 AMGAEVVEVSCPRFKYALGAYYIIMPSEVSSNLARYDGMRYGLRVMPPKDVAQTAANMMA 359 Query: 350 -TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 TR GFG EVK RI++GTY LS+ YD+ Y A+K+RTLI DF AF+Q DV+++PT Sbjct: 360 YTREAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFENAFKQA-DVLISPT 418 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 +P++AF G++ ++ +M ND+ T+ N+AG+PA+S+PA L + +P+G+Q I Sbjct: 419 SPSTAFKFGEKMDDPLAM--YMNDIATIPANLAGVPAMSIPAGLSDDGLPVGIQFIAPQQ 476 Query: 469 REETLF 474 R+E ++ Sbjct: 477 RDEVMY 482 >gi|21673107|ref|NP_661172.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlorobium tepidum TLS] gi|39931592|sp|Q8KFQ4|GATA_CHLTE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|21646180|gb|AAM71514.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlorobium tepidum TLS] Length = 481 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 206/481 (42%), Positives = 302/481 (62%), Gaps = 12/481 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + R RL S +++ +++ Y+Q I++S N + V +A A A E D ++ Sbjct: 1 MQFHGYEDLRSRLLSGELTCEQVISDYLQRIDSSRDD-NIFTVVFHDEAMARARELDSKL 59 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+A L G+PI IKD A KG S IL G+ Y++TV +++ A+ +G+ Sbjct: 60 QRGEAPGVLFGMPIAIKDNIAMKGAPLSCASKILAGYESVYDATVIKRMQAEDAIFVGRT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S GPV +P+ D T PGGSSGGS+AAVA L ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAIGPVPNPY---DKTR--VPGGSSGGSAAAVANDLAMVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F +G+KPTYGR SR G+++FA S DQ G++ D+A++L IAG DE D Sbjct: 175 SVRQPAGFCNIIGLKPTYGRISRYGLVAFASSFDQIGLLAANCDDAALVLGVIAGKDEHD 234 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT + VP+Y+ A+D S+ G+ +G+P+ + + L+ + + G+ L++AGA++VE Sbjct: 235 ATSSHHDVPEYDTAMDHVSVDGLRIGVPRAFFPESLNADVAGVVKAGLKKLEEAGAELVE 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 I LP + YA+ AYYI+ AEASSNLAR+DG RYG R + D+ MY N+R+ GFG EVK Sbjct: 295 IDLPESDYAIAAYYILVTAEASSNLARFDGARYGYRSPDSPDLSSMYVNSRTEGFGAEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R + + + EAFE+ VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRVFQDKYREAFEK-VDVIFGPTSPFPPFGIGDKM 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +N M DVFTV ++ G+PAISVP +P+G LI F E + + + + Sbjct: 414 DNPLEM--YLADVFTVPASIVGMPAISVPVGFDSLGLPVGAHLICNFFEEGKMLGIARHL 471 Query: 481 E 481 + Sbjct: 472 Q 472 >gi|221069479|ref|ZP_03545584.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Comamonas testosteroni KF-1] gi|220714502|gb|EED69870.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Comamonas testosteroni KF-1] Length = 496 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 213/487 (43%), Positives = 305/487 (62%), Gaps = 12/487 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+ ++V+E +LR+K +SA E ++ A + + A++ + A A+ +D Sbjct: 4 TELHQLSVAELAAQLRAKQVSATEAAQHFL-ARAKQHQNLGAFVAINEDATLAQAKAADA 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+PI KD F TK T A S +L+G++ +++TV +KL D G V LGK Sbjct: 63 LIAEGKGGKLAGVPIAHKDIFVTKDFPTTAASKMLEGYQSPFDATVVKKLADAGMVTLGK 122 Query: 122 LNMDEFAMGSSNETSYYGPV----ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LN DEFAMG +NE S PV P R+ +T++ PGGSSGGS+AAVA L A G Sbjct: 123 LNCDEFAMGGANENSAVPPVGFDAAQPVRNPWNTER-VPGGSSGGSAAAVAARLAPAVTG 181 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL + G Sbjct: 182 TDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMGRSAEDCALLLSEMCG 241 Query: 238 YD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + D+T ++ P D+ L SI+G+ +G+P E+ + LS + + + G Sbjct: 242 PDLDRDSTSLDYPAEDFTARLGDSIEGLRIGVPAEFFGEGLSDDVRTAVDAALKEYEKLG 301 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGF 355 AK+V +SLP T+ ++P YYI++PAEASSNL+R+DGV++G R +D+ +MY+ TR+ GF Sbjct: 302 AKLVPVSLPRTELSVPVYYILAPAEASSNLSRFDGVKFGHRAAKYEDLNDMYKKTRAEGF 361 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RIMIG YVLS YD++YL+A+KIR +I DF AF+ DVI PT+A+ Sbjct: 362 GDEVKRRIMIGAYVLSEGYYDAYYLQAQKIRRMIADDFQAAFKD-CDVIAGAAAPTTAWA 420 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +G + + + + D+FT+ ++AGLP +S+PA + MP+GLQLIG F E L + Sbjct: 421 IGGKAD---PVSNYLADIFTLPASLAGLPGLSLPAGFGDGGMPVGLQLIGNYFGEAKLLN 477 Query: 476 VGQIIEK 482 ++ Sbjct: 478 AAHRFQQ 484 >gi|168046765|ref|XP_001775843.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672850|gb|EDQ59382.1| predicted protein [Physcomitrella patens subsp. patens] Length = 506 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 205/481 (42%), Positives = 309/481 (64%), Gaps = 20/481 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDL 71 R+ L + + SAVE+ ++Y++ ++ + +++ V ++KA A+E D+RI G + L Sbjct: 20 RESLVTGEKSAVEITETYLEKLKEREPHVRSFLHV-SEKALQDAQELDRRIAEGGEVGPL 78 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+G+KD T+ + + S IL G+ P Y++T KL +GA+++GK NMDEF MGS Sbjct: 79 AGVPLGVKDNLCTRDMPSTGGSQILRGYCPPYDATAVAKLRSSGAILVGKTNMDEFGMGS 138 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S Y +PW PGGSSGGS+AAVA CA ++G+DTGGSIRQPASF Sbjct: 139 STEGSAYQVTSNPWDL-----SRVPGGSSGGSAAAVAAGQCAGALGSDTGGSIRQPASFC 193 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KP+YGR SR G++++A SLD G +V D+AILL+AIAG D+ D+TC VP Sbjct: 194 GVVGLKPSYGRVSRFGLMAYASSLDVVGCFGNSVMDAAILLEAIAGADKNDSTCSPQGVP 253 Query: 252 DYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY L + + G+ GI E D + + +Q + L+ GA + E+++ Sbjct: 254 DYTSKLLPVDNLDSRPLAGIRFGIITETVGDGVDEDVVSAIRQAAAHLESLGASVREVAM 313 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P+ LPAYY+++ +EASSNLARYDGVRYG R G++++ MY N+R+ GFG EVK RI+ Sbjct: 314 PNFSLGLPAYYVLATSEASSNLARYDGVRYGPRAHGEEVMSMYGNSRAQGFGSEVKRRIL 373 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD+ Y +A+++RT+I++DF A ++ VD++++P PT A+ + ++ N+ Sbjct: 374 MGTYALSAGYYDAFYKKAQQVRTVIQQDFKNALQE-VDLLISPVAPTPAYKIDEKMNDPL 432 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEK---KMPLGLQLIGQPFREETLFSVGQIIE 481 +M D+ TV VN+AGLPA+ VP L + +P+GLQ+IG F E+ L +G I E Sbjct: 433 AM--YVGDLMTVNVNLAGLPALVVPCGLAKGGTCGLPVGLQMIGPAFGEDNLLRLGHIFE 490 Query: 482 K 482 + Sbjct: 491 Q 491 >gi|314918096|gb|EFS81927.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Propionibacterium acnes HL050PA1] Length = 501 Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 212/488 (43%), Positives = 304/488 (62%), Gaps = 14/488 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + +E +R+ ++ IS+ E+ +++ I + ++A++ V A AA D Sbjct: 1 MNELLTLTAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI +G+ L G+P+ +KD F TKGI T A S +L+G+ P Y+ST+ + D G V+L Sbjct: 61 ARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIPPYDSTIVTRCKDAGMVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS ETS +GP +PW + PGGS GGS+A++A F ++GTD Sbjct: 121 GKTNLDEFAMGSSTETSAFGPTHNPWDL-----ERVPGGSGGGSAASLASFQAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVGIKPTYG SR G+I+ A SLD G D+A+L +AIAG+D Sbjct: 176 TGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCAFFCLDAALLHQAIAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T +N P P A Q+ + G+ +G+ E P ++ + + + L +AGA+ Sbjct: 236 AMDQTTINQPTPAVVEAARQTDVSGVRIGVVTELSGQGYDPQVEARFHEAVEMLIEAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGF 355 VE+S P+ ALPAYY+I PAE SSNLARYD +RYGLRV +G+ E + TR G Sbjct: 296 GVEVSCPNFDLALPAYYLIQPAEVSSNLARYDAMRYGLRVNDDGEHSAEQVMRATRGAGL 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++GTY LS+ YD++Y A+K+RTLI+RDF +A+ Q DV+++P TPT+AF Sbjct: 356 GAEAKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFEKAW-QMCDVLVSPATPTTAFR 414 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 LG E + M +D+ TV NMAG PA S P L E MP+G+Q++ ++ ++ Sbjct: 415 LG--ERTADPMAMYRSDLCTVPANMAGSPAGSFPIGLSETDGMPVGMQVMAPIMADDRIY 472 Query: 475 SVGQIIEK 482 VG +E+ Sbjct: 473 RVGAALER 480 >gi|111023435|ref|YP_706407.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhodococcus jostii RHA1] gi|110822965|gb|ABG98249.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus jostii RHA1] Length = 493 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 208/493 (42%), Positives = 319/493 (64%), Gaps = 17/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + ++ ++ S+++S+VE+ +++ I + +NA++ V ++A +A+E D Sbjct: 3 AELTTLDAADLASKIHSREVSSVEVTQAHLDRIAAVDGDLNAFLHVAGEQALVSAKEVDS 62 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L G+P+ +KD F T + T S IL+G+ Y++T+T+KL + G +L Sbjct: 63 SLAAGNAPASPLAGVPLALKDIFTTTDMPTTCASKILEGWIAPYDATLTKKLREAGIPIL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S YGP +PW D+T PGGS GGS+AA+A +IGTD Sbjct: 123 GKTNLDEFAMGSSTENSAYGPTRNPW---DTTR--IPGGSGGGSAAALASRQAPLAIGTD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 178 TGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVIAGHD 237 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T ++ PV A + +++G+ VG+ KE D P + ++ ++ L + Sbjct: 238 PRDSTSIDAPVRPVVAAAREGAGGNLKGVKVGVVKELHSDSYQPGVISSFDAAVAQLTEL 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSI 353 GA++VE+S P+ +YAL +YY+I P+E SSNLAR+DG+RYGLR++ D+ ++ TR+ Sbjct: 298 GAEVVEVSCPNFEYALASYYLILPSEVSSNLARFDGMRYGLRIDEGDMSADQVMAATRAA 357 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIMIGTY LSS YD++Y +A K+RTLI RDF +A+E+ VDV+++PT+P + Sbjct: 358 GFGPEVKRRIMIGTYALSSGYYDAYYGQALKVRTLIARDFEKAYEK-VDVLVSPTSPFTP 416 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREET 472 + LG++ + +M +D+ T+ N+AG A+SVP+ L + +P+GLQ++ +E Sbjct: 417 WKLGEKVGDPLAM--YLSDLCTLPTNLAGHCAMSVPSGLSADDGLPVGLQIMAPALADER 474 Query: 473 LFSVGQIIEKEAG 485 L+ VG E G Sbjct: 475 LYRVGAAYEAARG 487 >gi|150016997|ref|YP_001309251.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clostridium beijerinckii NCIMB 8052] gi|149903462|gb|ABR34295.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium beijerinckii NCIMB 8052] Length = 479 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 204/479 (42%), Positives = 311/479 (64%), Gaps = 11/479 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + E ++++S+++++ LV SYI+ I + S +NA++ + ++A A A+E D ++ G Sbjct: 3 MNIKEMVEKIKSRELTSEALVQSYIEEITKNESTINAFLTLTCEEALAKAKEIDAKVKAG 62 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++ L GIPI IKD T+G++T S +L+ F P Y++TV +KL A+++GK NMD Sbjct: 63 ESLGRLAGIPIAIKDNICTEGVNTTCASKMLEDFIPPYDATVIKKLLAEDAIIIGKTNMD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S + ++P D+T PGGSSGGS+AAVA S+G+DTGGSIR Sbjct: 123 EFAMGSSNENSAFKKTLNPR---DTTR--VPGGSSGGSAAAVAAKFAPVSLGSDTGGSIR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G VG+KPTYG SR G+I+F SLDQ G + +V DSA +L I+G DE D+T Sbjct: 178 QPAAFCGVVGLKPTYGLVSRFGLIAFGSSLDQIGPFSNSVEDSAYILNIISGTDEYDSTS 237 Query: 246 V-NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + +L DY +L I+GM +G+P+E+ + L I ++ + + LK+ GA++ SL Sbjct: 238 IRDLKEIDYTASLQDGIKGMKIGVPEEFFGEGLDEEIKESVKNSLEKLKELGAEVETFSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 P + L AYYI+S AEAS+NL RYDG+RYG + ++ E+ EN+R+ GFG EVK RI Sbjct: 298 PIIKDGLAAYYIMSSAEASTNLDRYDGIRYGYKTPNYTNLDELVENSRTEGFGAEVKRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GTY L+S YD++Y +A R ++ D + FE+ D+I+ P +P F +G+++ + Sbjct: 358 MLGTYALASGYYDAYYKKADAFRRKLRYDLKKTFEK-YDLIVGPVSPVLPFKIGEKKADP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SM D++T+ VN+AG PAIS+PA ++ +P+G+QL+G EE +F +E+ Sbjct: 417 LSM--YLADIYTINVNLAGNPAISIPAGKSKEGLPIGIQLMGDMLCEEKIFKAAYSLEQ 473 >gi|54026229|ref|YP_120471.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nocardia farcinica IFM 10152] gi|81602526|sp|Q5YRT4|GATA_NOCFA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|54017737|dbj|BAD59107.1| putative glutamyl-tRNA amidotransferase subunit A [Nocardia farcinica IFM 10152] Length = 490 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 219/496 (44%), Positives = 313/496 (63%), Gaps = 20/496 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L +E ++ +++IS+VE+ +++ I + ++NA++ V ++A AA D Sbjct: 1 MSDLTTRTAAELAQQIHAREISSVEVTQAHLDRIAEVDGELNAFLHVAGERALEAAAAVD 60 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + G+A L G+P+ +KD F T + T S IL+G+ Y++TVT KL G + Sbjct: 61 AALAAGEAPASPLAGVPLALKDVFTTTDMPTTCASKILEGWMSPYDATVTTKLRAAGIPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YGP +PW D+T PGGS GGS+AA+A +IGT Sbjct: 121 LGKTNMDEFAMGSSTENSAYGPTRNPW---DTTR--IPGGSGGGSAAALASRQAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + IAGY Sbjct: 176 DTGGSIRQPAAVTATVGTKPTYGTVSRYGLVACASSLDQGGPCGRTVLDTALLHEVIAGY 235 Query: 239 DECDATCVNLPVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T ++PVP R ++G+ VG+ KE D P + ++ ++ LKD Sbjct: 236 DPRDSTSRDVPVPPVVEAARRGAAGDLRGVKVGVVKELHSDSYQPGVLASFDAAVAVLKD 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----T 350 GA++VE+S PH +Y LP+YY++ P+E SSNLAR+D +RYGLRV G D E T Sbjct: 296 LGAEVVEVSCPHFEYGLPSYYLVMPSEVSSNLARFDAMRYGLRV-GDDGTHSAEQVMAMT 354 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RIMIGTY LS+ YD +Y +A K+RTLI RDF A+EQ VDV+++PT+P Sbjct: 355 RAAGFGPEVKRRIMIGTYALSAGYYDEYYGQALKVRTLIARDFDRAYEQ-VDVLVSPTSP 413 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFR 469 + + LG++ ++ +M +D+ T+ N+AG PA+SVP+ L + MP+GLQ++ Sbjct: 414 FTPWKLGEKVDDPLAM--YLSDLCTLPTNLAGHPAMSVPSGLSKDDGMPVGLQIMAPALA 471 Query: 470 EETLFSVGQIIEKEAG 485 ++ L+ VG E G Sbjct: 472 DDRLYRVGAAYEAARG 487 >gi|237785834|ref|YP_002906539.1| glutamyl-tRNA(gln) amidotransferase subunit A [Corynebacterium kroppenstedtii DSM 44385] gi|237758746|gb|ACR17996.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Corynebacterium kroppenstedtii DSM 44385] Length = 503 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 207/481 (43%), Positives = 308/481 (64%), Gaps = 24/481 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDL 71 +++ S D+S+VE +++ I + ++A++ V A +A AAA++ D I G+ + L Sbjct: 25 EKIHSGDVSSVEATQAHLDRISQIDGDIHAFLHVSADEALAAAKKVDDSIARGEKPSSPL 84 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ +KD F T T S IL+G+ Y++TVT++L + G ++GK NMDEFAMGS Sbjct: 85 AGVPLALKDVFTTTDAPTTCASKILEGYMSPYDATVTKRLREAGIPIVGKTNMDEFAMGS 144 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S E S YGP +PW TPGGS GGS+AA+A + +IGTDTGGSIRQPA+ T Sbjct: 145 STENSAYGPTHNPWDL-----ARTPGGSGGGSAAALASGMAPLAIGTDTGGSIRQPAALT 199 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAGYD D+T VN PV Sbjct: 200 NTVGVKPTYGTVSRYGLVACASSLDQGGPTGRTVLDTALLHEVIAGYDPHDSTSVNRPVA 259 Query: 252 DYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +A + + G+ VG+ K+ D + +++ + ++ L GA++V++ PH Sbjct: 260 PVVQAAREGAKGDLSGLKVGVVKQLAGDGYQDGVLESYNEAVATLSRLGAEVVDVDCPHF 319 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV------EGKDILEMYENTRSIGFGQEVKH 361 AL AYY+I P E SSNLAR+DG+RYGLRV D++E+ +R GFG EVK Sbjct: 320 DDALSAYYLILPCEVSSNLARFDGMRYGLRVGDDGHHSANDVMEL---SREEGFGSEVKR 376 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTY LS YD++YL+A+++R LI RDF +A+E+ VDV+++PTTPT+AF LG + + Sbjct: 377 RIILGTYALSVGYYDAYYLQAQRVRALIARDFAKAYEK-VDVLVSPTTPTTAFKLGTKVD 435 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQII 480 + SM D+ T+ +N+AGL +SVP+ L + +P+GLQ++ +++ L+ VG Sbjct: 436 DPISMYRF--DLCTLPLNLAGLCGMSVPSGLASDTNLPVGLQIMAPAHQDDRLYRVGAAY 493 Query: 481 E 481 E Sbjct: 494 E 494 >gi|326566240|gb|EGE16392.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis 103P14B1] gi|326572273|gb|EGE22268.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis BC8] gi|326574871|gb|EGE24801.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis 101P30B1] Length = 492 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 212/496 (42%), Positives = 305/496 (61%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A A+ +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAKLAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y++TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFISPYDATVVDSIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPWDVQRVPGG-----SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + G+D Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTFGKSALDCAYLLAPMTGHDP 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT +N P DY A D + + G +G+ K Y L ++K+ + ++ ++ Sbjct: 236 KDATSINRPSEDYVADILATATDGKPLTGKKIGVAKAYFGAGLDDEVEKSIRAALATYEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSD 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT+A Sbjct: 356 GFGEEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTAA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLI + + E Sbjct: 415 YKLGESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQAN-GLPVGLQLISKHWAESE 469 Query: 473 LFSVGQIIEKEAGYFR 488 L I + + + Sbjct: 470 LLKTAHIYQSHTDFHQ 485 >gi|145295386|ref|YP_001138207.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glutamicum R] gi|166217665|sp|A4QDK8|GATA_CORGB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|140845306|dbj|BAF54305.1| hypothetical protein [Corynebacterium glutamicum R] Length = 497 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 211/492 (42%), Positives = 314/492 (63%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL +E + S+++++ E+ +++ I + ++A++ V ++A AA++ DK Sbjct: 12 NELTTKTAAELAGLIHSREVTSREVTQAHLDRIAAVDGDIHAFLHVGQEEALNAADDVDK 71 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ G+A L G+P+ +KD F T T A S +L+G+ Y++TVT+K+ + G +L Sbjct: 72 RLDAGEAPASALAGVPLALKDVFTTTDAPTTAASKMLEGYMSPYDATVTRKIREAGIPIL 131 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW ++ T + GGSS +A A +IGTD Sbjct: 132 GKTNMDEFAMGSSTENSAYGPTHNPW-DLERTAGGSGGGSSAALAAGQAPL----AIGTD 186 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D Sbjct: 187 TGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQGGPTARTVLDTALLHEVIAGHD 246 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT VN PV +A + ++GM VG+ K++ D P + + + + ++ Sbjct: 247 GFDATSVNRPVAPVVQAAREGANGDLKGMKVGVVKQFDRDGYQPGVLEAFHASVEQMRSQ 306 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D E+ TR Sbjct: 307 GAEIVEVDCPHFDDALGAYYLILPCEVSSNLARFDGMRYGLRA-GDDGTRSADEVMAYTR 365 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++YL+A+++RTLI +DF +A+EQ VD++++PTTPT Sbjct: 366 AQGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIAQDFAKAYEQ-VDILVSPTTPT 424 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFR 469 +AF LG++ + M YN D+ T+ +N+AGL +S+P+ L + +P+GLQL+ F+ Sbjct: 425 TAFKLGEKVTDPLEM---YNFDLCTLPLNLAGLAGMSLPSGLASDTGLPVGLQLMAPAFQ 481 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 482 DDRLYRVGAAFE 493 >gi|224372737|ref|YP_002607109.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nautilia profundicola AmH] gi|223588728|gb|ACM92464.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Nautilia profundicola AmH] Length = 451 Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 193/453 (42%), Positives = 290/453 (64%), Gaps = 17/453 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESD--KRIINGDARDL-EGIPIGIKDCFATKGIH 88 +A++ S ++ + +KA+ E ++ + D D+ +G+PI IKD KG Sbjct: 6 EALKLSKEELKDLKAEINKKAKENKELGGYVEQFLGKDLSDMGDGVPIAIKDNINVKGWE 65 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 S IL G+ Y +TV K+ + G G+ NMDEFAMGSS ETSYYG ++P + Sbjct: 66 VTCSSKILQGYVSPYNATVIDKMLEAGLSPFGRCNMDEFAMGSSTETSYYGKTLNPHDA- 124 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 PGGSSGGS+A V L A++G+DTGGSIRQPA+F G VG+KPTYGR SRLG+ Sbjct: 125 ----NRVPGGSSGGSAAVVGAGLAVAALGSDTGGSIRQPAAFCGVVGMKPTYGRVSRLGL 180 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 ++F+ SLDQ G IT+ V D+AIL +AG+D D+T PV + + ++++ + + + + Sbjct: 181 VAFSSSLDQIGPITQNVEDAAILYNILAGHDPKDSTSA--PVENKKIEINEN-RKLKIAV 237 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 Y +D I I+ L+ G I+ +L +++Y + YY+++ AEASSNLAR Sbjct: 238 IDNY-IDEADEDIKNRLNDIIAELEKEGHTIIHKTLMNSKYDVATYYVVATAEASSNLAR 296 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 +DG+RYG R+EGKD+ E Y+ TR+ FG EVK RIM+GT+VLSS YD++YL+A+K+R L Sbjct: 297 FDGMRYGNRIEGKDLKETYKLTRA-QFGDEVKRRIMLGTFVLSSGYYDAYYLKAQKVRHL 355 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 IK +F + F + D++LTP TP++AF G +++ + +D++T++VN+AG+PAIS+ Sbjct: 356 IKNEFDKLFAEA-DLVLTPVTPSTAFEFGSKKD---PLEMYLSDIYTISVNLAGVPAISL 411 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 P + MP+GLQLI + F E+TLF +I+E Sbjct: 412 PVGKDKNNMPIGLQLIAKHFDEQTLFDGAKIVE 444 >gi|193213405|ref|YP_001999358.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlorobaculum parvum NCIB 8327] gi|229485867|sp|B3QQF5|GATA_CHLP8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|193086882|gb|ACF12158.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlorobaculum parvum NCIB 8327] Length = 481 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 204/481 (42%), Positives = 300/481 (62%), Gaps = 12/481 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + R +L S++++ +++ Y+Q I +S N + V + A A E D ++ Sbjct: 1 MQFRRYEDLRSKLLSRELTCEQVISEYLQRI-DSKKDDNIFTAVFHEAALERARELDAKL 59 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L G+PI IKD + KG S ILDG+ Y++T +++ A+ +G+ Sbjct: 60 ERGEEPGVLFGMPIAIKDNISMKGAPLSCASKILDGYESVYDATAIERMVAEDAIFVGRT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S GPV +P+ D T PGGSSGGS+AAVA LC ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAIGPVPNPF---DKTR--VPGGSSGGSAAAVANDLCMVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQP F VG+KPTYGR SR G+++FA S DQ G++ D+A++L IAG D+ D Sbjct: 175 SVRQPGGFCNVVGLKPTYGRISRYGLVAFASSFDQIGVLAANCDDAALVLGVIAGQDDRD 234 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT + VPDYE +D S++G+ VG+P + + L+ + + G+ L+DAGA++VE Sbjct: 235 ATSSHHEVPDYESTMDHVSLEGLRVGVPSAFFPENLNADVAGVVKAGLKKLEDAGAELVE 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 I LP + YA+ AYYI+ AEASSNLAR+DG RYG R + D+ MY N+R+ GFG EVK Sbjct: 295 IELPESDYAIAAYYILVTAEASSNLARFDGARYGYRSPDSPDLSSMYVNSRTEGFGAEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R + + + EAFE+ VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRVFQEKYREAFEK-VDVIAGPTSPFPPFGIGDKM 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +N M DVFTV ++ G+PA+SVP +P+G+ LI F E + + + + Sbjct: 414 DNPLEM--YLADVFTVPASIVGMPAVSVPVGFDSLGLPVGVHLICNFFEEGKMLGIARNL 471 Query: 481 E 481 + Sbjct: 472 Q 472 >gi|317486127|ref|ZP_07944972.1| amidase [Bilophila wadsworthia 3_1_6] gi|316922612|gb|EFV43853.1| amidase [Bilophila wadsworthia 3_1_6] Length = 473 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 211/486 (43%), Positives = 313/486 (64%), Gaps = 17/486 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L +++E R RL D+SA + + + I + ++A I V Q A EE+ Sbjct: 1 MSDLIQASLAEIRARLAGGDVSAEAVAKACLDRIAETEPSIHALITVREQ----ALEEAR 56 Query: 61 KRIING-DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 G DA + L G+P+ +KD TKG T A S IL GF P Y++ V ++L + GAV+ Sbjct: 57 ALDAQGPDASKPLWGVPVTVKDAIVTKGTRTTAGSKILGGFNPFYDAFVVERLKEAGAVI 116 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK NMDEFAMGSS E S +GP +P + PGGSSGGS+A+VA C AS+GT Sbjct: 117 IGKNNMDEFAMGSSTENSAFGPTRNP-----RDPERIPGGSSGGSAASVAANQCYASLGT 171 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ G VG+KPTYGR SR G+I++ SLDQ G +TRTV D+A++L IAG+ Sbjct: 172 DTGGSIRQPAALCGCVGLKPTYGRVSRYGVIAYGSSLDQVGPLTRTVEDAALVLSVIAGH 231 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T PV Y ++G+ +G+P+E+ + L + K Q ++ +D GA+ Sbjct: 232 DKRDSTSSPRPVDGYADFSRSDLKGVRLGVPREFMAEGLDGPVAKACQDALARARDLGAE 291 Query: 299 IVEISLPH-TQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V++SLPH T++A+ AYYI++ AEASSNL+R+DGVRYG R E K++ ++Y +RS GFG Sbjct: 292 LVDVSLPHATRHAIAAYYIVAMAEASSNLSRFDGVRYGYRAAEPKNLDDLYCRSRSEGFG 351 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 QEV+ RI++GTYVLS+ YD++Y +A ++R LI++D+ A D + P +P +A+ L Sbjct: 352 QEVQRRILLGTYVLSAGYYDAYYKKAAQVRRLIRQDYLNALGS-CDALFGPVSPVTAWKL 410 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G ++ M D++TV++N+AGLP +S P + +P+G+QLIG+ F E + + Sbjct: 411 GSIIDDPLKM--YLMDIYTVSLNLAGLPGLSFPVGEAD-GLPVGMQLIGKDFDEAGILGI 467 Query: 477 GQIIEK 482 G ++ K Sbjct: 468 GNVLSK 473 >gi|325675874|ref|ZP_08155558.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus equi ATCC 33707] gi|325553845|gb|EGD23523.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus equi ATCC 33707] Length = 494 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 214/493 (43%), Positives = 312/493 (63%), Gaps = 17/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + S+ ++ S++IS+VE +++ I + +++A++ V ++A AA+E D Sbjct: 3 TDLTRLDASDLASKIHSREISSVEATQAHLDRIAKVDGELHAFLHVAGEQALVAAKEVDS 62 Query: 62 RIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I GD L G+PI +KD F T + T S IL+ + Y++T+T KL + G +L Sbjct: 63 AIAAGDKPVSALAGVPIALKDVFTTTDMPTTCASKILENWVSPYDATLTTKLREAGIPIL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D+T PGGS GGS+AA+A + +IGTD Sbjct: 123 GKTNMDEFAMGSSTENSAYGPTRNPW---DTTR--IPGGSGGGSAAALASYQAPLAIGTD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + IAGYD Sbjct: 178 TGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVIAGYD 237 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T VN PV A Q ++G+ VG+ KE D P + ++ + L Sbjct: 238 PRDSTSVNEPVRPVVEAARQGATGDLKGVRVGVVKELHSDSYQPGVIASFDAAVEQLTAL 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSI 353 GA++VE+S P+ +AL AYY+I P+E SSNLAR+D +RYGLRV+ ++ ++ TR+ Sbjct: 298 GAEVVEVSCPNFLHALAAYYLILPSEVSSNLARFDAMRYGLRVDDGNMSAEQVMAATRAA 357 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EVK RIMIGTY LSS YD++Y A K+RTLI RDF A+E+ VDV+++PT+P + Sbjct: 358 GFGKEVKRRIMIGTYALSSGYYDAYYGSALKVRTLIARDFDAAYEK-VDVLVSPTSPFTP 416 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA-ALCEKKMPLGLQLIGQPFREET 472 + LG++ ++ +M +D+ T+ N+AG A+SVP+ A + +P+GLQ++ +E Sbjct: 417 WKLGEKVDDPLAM--YLSDLCTLPTNLAGHCAMSVPSGASADDGLPVGLQIMAPALADER 474 Query: 473 LFSVGQIIEKEAG 485 L+ VG E G Sbjct: 475 LYRVGAAYEAARG 487 >gi|300676867|gb|ADK26739.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Zonotrichia albicollis] Length = 524 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 203/491 (41%), Positives = 289/491 (58%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L+ ++ EL + I+ S +NAYI V + A AEES++R G L+GI Sbjct: 13 LKEGRVAPTELCQRCLALIK-STKFLNAYITVAEETAMKQAEESEERYKKGQPLGILDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F T GI T S++L G+ Y +TV QKL D GAV+LGK N+DEFAMGS + Sbjct: 72 PIAVKDNFNTAGIETTCASNMLKGYISPYNATVVQKLLDQGAVLLGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPWR-SMDSTDKFTPGGSSGGSSA--------------AVAGFLCAASIGTD 179 +GPV +PW S +K P + AVA F C A++G+D Sbjct: 132 DGVFGPVRNPWSYSKQYKEKSGPKSHPEDEESNWVITGGSSGGSAAAVASFTCFAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KPTYG SR G+I S+D GI+TR V D+A+LL ++AG+D Sbjct: 192 TGGSTRNPAAHCGVVGLKPTYGLISRHGLIPLVNSMDVPGILTRCVDDAAVLLGSLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + +E + +++GIPKEY LS + W + K+AGAK+ Sbjct: 252 PKDSTTIQDDFMPFELHNLADVSKLSIGIPKEYHAPGLSSEMLALWSKAADLFKNAGAKV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 VE+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R + KD E +Y TR GF Sbjct: 312 VEVSLPHTPYSIVCYHVLCTAEVASNMARFDGLEYGHRSDMKDSTESLYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 V+ RI+ G Y L + Y+ ++++A+K+R LI DF + F GVD++LT TT A P Sbjct: 372 VRGRILSGNYFLLKQNYEKYFVKAQKVRRLIANDFVKVFRSGVDILLTTTTLRDAAPYTE 431 Query: 418 --KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +E+N + S +D+ T A NMAGLPAISVP AL E+ +P+GLQ IG+ F+E+ L + Sbjct: 432 FIQEDNRTRSA---QDDILTQAANMAGLPAISVPTALSERGLPVGLQFIGRSFQEKQLLT 488 Query: 476 VGQIIEKEAGY 486 V + EK+ + Sbjct: 489 VAKWFEKQVQF 499 >gi|149722851|ref|XP_001503993.1| PREDICTED: similar to Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Equus caballus] Length = 527 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 202/491 (41%), Positives = 296/491 (60%), Gaps = 24/491 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGHITPTELCQKCLSIIKKTKF-LNAYITVSEEVALKQAEESEKRYKKGHSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PIAVKDNFSTSGIETTCASNMLRGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPWR---------------SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +GPV +PW + ++ GGSSGGS+AAV+ F C A++G+D Sbjct: 132 DGVFGPVKNPWSYSKQYREKRKQKSHCENEDSNWLITGGSSGGSAAAVSAFTCFAALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG+KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D Sbjct: 192 TGGSTRNPAAHCGLVGLKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGVLAGHD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T + PV + + + +GIPKEY LS + W + + + GAK+ Sbjct: 252 PKDSTTIQDPVKPFVLPSLTDVSKLCIGIPKEYLTPELSSEVRSLWSKAANLFESEGAKV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 +E+SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF Sbjct: 312 IEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLEYGHRCDIDVSTEAMYAATRREGFNDV 371 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 V+ RI+ G + L Y++++++A+K+R LI DF F GVDV+LTPTT + A P Sbjct: 372 VRGRILSGNFFLLKENYENYFVKAQKVRRLIANDFVTVFNSGVDVLLTPTTLSEAVPYTE 431 Query: 418 --KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 KE+N + S +D+FT A NMAGLPA+SVP AL + +P+GLQ IG+ F ++ L + Sbjct: 432 FIKEDNRTRSA---QDDIFTQAANMAGLPAVSVPMALSNQGLPIGLQFIGRAFCDQELLT 488 Query: 476 VGQIIEKEAGY 486 + + EK+ + Sbjct: 489 IAKWFEKQVQF 499 >gi|294338603|emb|CAZ86932.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Thiomonas sp. 3As] Length = 506 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 215/493 (43%), Positives = 302/493 (61%), Gaps = 30/493 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L ++ +S+ EL + + I +++ + A++ V A A +A+ +D GD R L G+P Sbjct: 20 LAARQVSSAELTRAALDRIA-AHADLGAFLHVDADGAMKSAQAADAARAAGDTRPLLGVP 78 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-------GAVMLGKLNMDEFA 128 + KD F T+ + A S +L G+ +++TV +L G V +GK NMDEFA Sbjct: 79 VAHKDVFVTRTLPATAGSRMLVGYVSPFDATVVARLGSGADDFAGAGMVTVGKTNMDEFA 138 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE S YGPV +PW SSGGS+AAVA L A+ GTDTGGSIRQPA Sbjct: 139 MGSANENSAYGPVRNPWDLASIPGG-----SSGGSAAAVAARLVPAATGTDTGGSIRQPA 193 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G GIKPTYG CSR G+I+FA SLDQAG + +T D A LL A+ G+D DAT V Sbjct: 194 AMCGITGIKPTYGLCSRYGMIAFASSLDQAGPMAQTAWDCAALLTAMTGFDPRDATSVER 253 Query: 249 PVPDYERALD---------QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 VPDY ALD Q ++G+ +G+P+EY L+ ++ + + ++ GA + Sbjct: 254 AVPDYVAALDQPLPGATAAQPLKGLRIGLPREYFGTGLAADVESAVRTALKTIESLGATL 313 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 V++SLP T+ ++PAYYII+PAEASSNL+R+DGVR+G R + KD+ EMY +R+ GFG E Sbjct: 314 VDVSLPLTELSIPAYYIIAPAEASSNLSRFDGVRFGHRTAQYKDLAEMYGKSRTEGFGPE 373 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIMIG YVLS YD++YL+A+KIR LI DF AF Q DVI P +PT A+ G Sbjct: 374 VKRRIMIGAYVLSHGYYDAYYLQAQKIRRLIADDFARAFTQ-CDVIAGPVSPTVAWNRGD 432 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLFS 475 + + + + D++T++ ++AGLP +SVPA + P+GLQLIG F EE L Sbjct: 433 KAD---PLANYLADIYTLSASLAGLPGMSVPAGFGAGANARRPVGLQLIGPHFAEERLLR 489 Query: 476 VGQIIEKEAGYFR 488 V ++ + + R Sbjct: 490 VAHQFQQASDWHR 502 >gi|194333246|ref|YP_002015106.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Prosthecochloris aestuarii DSM 271] gi|229485997|sp|B4S4W1|GATA_PROA2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|194311064|gb|ACF45459.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Prosthecochloris aestuarii DSM 271] Length = 477 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 208/482 (43%), Positives = 307/482 (63%), Gaps = 12/482 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + R++L ++++S +V +Y+Q IE + + N YI V +A A D+++ Sbjct: 1 MQFSSYRDLREKLLAREMSCEAVVTAYLQRIEATRDR-NIYISVFYDEALRQARSLDRKL 59 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L G+P+ IKD + +G S IL + Y++TV ++L + AV LGK+ Sbjct: 60 DAGETPGKLFGMPMAIKDNISIEGTGLTCASKILSNYTAVYDATVIRRLKEEDAVFLGKV 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S +GPV +P+ DST PGGSSGGS+AAVAG L ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSSFGPVPNPY---DSTK--VPGGSSGGSAAAVAGDLALVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F VG+KPTYGR SR G+++F S DQ GI+++ D+A +L IAG D D Sbjct: 175 SVRQPAGFCNVVGLKPTYGRISRYGVVAFGSSFDQIGILSKNADDAAAVLGVIAGNDGSD 234 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT + VPDY ++ S++G+ +GIPKEY + L+ + Q+ + L+ GA+++ Sbjct: 235 ATSSHNQVPDYAAEMEGVSLRGLKIGIPKEYFPESLNSDVASVIQERLDLLRSLGAEMIP 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVK 360 I+LP + YA+ AYYI++ AEASSNLAR+DG RYG R E D+ +MY N+R+ GFG+EVK Sbjct: 295 ITLPESDYAIAAYYILTTAEASSNLARFDGARYGYRSEKSSDLTDMYVNSRTEGFGEEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R + + EA VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRVFLNRYREALAN-VDVIAGPTSPFPPFGIGDKM 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M DVFTV ++AG+PA+SVP +P+G+QLIG F E L + + Sbjct: 414 DDPLEM--YLADVFTVPASIAGIPALSVPVGFDSSGLPVGMQLIGNFFEEGKLLGTARAV 471 Query: 481 EK 482 + Sbjct: 472 QN 473 >gi|303256313|ref|ZP_07342329.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderiales bacterium 1_1_47] gi|330999008|ref|ZP_08322733.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Parasutterella excrementihominis YIT 11859] gi|302861042|gb|EFL84117.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderiales bacterium 1_1_47] gi|329575750|gb|EGG57276.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Parasutterella excrementihominis YIT 11859] Length = 485 Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 195/479 (40%), Positives = 292/479 (60%), Gaps = 11/479 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL +V+E L K++SA E+ +Y+ IE+ S +NA+++V + AE +D Sbjct: 1 MKELTHASVAELSALLSKKEVSAKEIAQAYLDKIEDKKS-LNAFLDVRPEVTLKEAEAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++I G A L G+PI KD F T+ + A S +L+ + +++TV +++ + G V LG Sbjct: 60 RKIAEGTASPLTGVPIAHKDIFVTRNWASTAASKMLENYMSPFDATVVERIQEAGLVCLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N DEFAMGS+ S YG +PW + PGGSSGGS++ VA L A+ TDT Sbjct: 120 KTNCDEFAMGSTTANSAYGKTFNPW-----NEHVVPGGSSGGSASCVAARLTPAATATDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G GIKPTYGR SR G+I+FA SLD AG+I +T D A++L + G+D+ Sbjct: 175 GGSIRQPAAFCGVTGIKPTYGRPSRWGMIAFASSLDTAGVIAQTAEDCALVLSQMIGFDK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + LP D L+ ++G+ +G+P+ + +D +P + + + +D GA +V Sbjct: 235 RDSTSIELPPEDLTIGLNDGVKGLRIGVPRAW-IDKAAPALRDSIYAALKVYEDLGAVLV 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 +I L +P YYII+PAEASSNL R+DGVRYG R + D+L+M + +R GFG E Sbjct: 294 DIKLEKADLGVPVYYIIAPAEASSNLGRFDGVRYGHRAQNYTDLLDMIKKSRDEGFGPEP 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI+IGTYVLS YD++Y++A+++R LI +F F + DVI P + +AF + Sbjct: 354 KRRILIGTYVLSHGYYDAYYIKAQQVRRLIAEEFDHIFAENCDVIAAPVSTDAAF---RF 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ S + +D++TV ++AGLP++SVP + +P GLQLI +E L Sbjct: 411 DDKSDPLSLYLSDLYTVPGSLAGLPSMSVPCGMSPDNLPFGLQLIAPKCKEARLLRTAH 469 >gi|299533739|ref|ZP_07047111.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Comamonas testosteroni S44] gi|298718288|gb|EFI59273.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Comamonas testosteroni S44] Length = 496 Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 211/491 (42%), Positives = 304/491 (61%), Gaps = 20/491 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+ ++V+E +LR+K +SA E ++ A + + A++ + A A+ +D Sbjct: 4 TELHQLSVAELAAQLRAKQVSATEAAQHFL-ARARQHQNLGAFVAINEDATLAQAKAADA 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+PI KD F TK T A S +L+G++ +++TV +KL ++G V LGK Sbjct: 63 LIAEGKGGKLAGVPIAHKDIFVTKDFPTTAASKMLEGYQSPFDATVVRKLAESGVVTLGK 122 Query: 122 LNMDEFAMGSSNETSYYGPV--------ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 LN DEFAMG +NE S PV +PW ++ PGGSSGGS+AAVA L Sbjct: 123 LNCDEFAMGGANENSAVAPVGFDAAQPVRNPW-----NNERVPGGSSGGSAAAVAARLAP 177 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL Sbjct: 178 AVTGTDTGGSIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMGRSAEDCALLLS 237 Query: 234 AIAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 + G D + D+T ++ P D+ L SI+G+ +G+P E+ + LS + + Sbjct: 238 EMCGPDLDRDSTSLDYPAEDFAARLGDSIEGLRIGVPAEFFGEGLSDDVRAAVDAALKEY 297 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTR 351 + GAK+V +SLP T+ ++P YYI++PAEASSNL+R+DGV++G R +D+ +MY+ TR Sbjct: 298 EKLGAKLVPVSLPRTELSVPVYYILAPAEASSNLSRFDGVKFGHRAAKYEDLNDMYKKTR 357 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RIMIG YVLS YD++YL+A+KIR +I DF AF+ DVI PT Sbjct: 358 AEGFGDEVKRRIMIGAYVLSEGYYDAYYLQAQKIRRMIADDFQAAFKD-CDVIAGAAAPT 416 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A+ +G + + + + D+FT+ ++AGLP +S+PA + MP+GLQLIG F E Sbjct: 417 TAWAIGGKAD---PVSNYLADIFTLPASLAGLPGLSLPAGFGDGGMPVGLQLIGNYFSEA 473 Query: 472 TLFSVGQIIEK 482 L + ++ Sbjct: 474 KLLNAAHRFQQ 484 >gi|56808110|ref|ZP_00365900.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Streptococcus pyogenes M49 591] Length = 420 Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 190/419 (45%), Positives = 262/419 (62%), Gaps = 10/419 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 + GIP+ +KD +TKGI T A S +L + P +++T + +++GK NMDEFAMG Sbjct: 1 MSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTNMDEFAMG 60 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ETSY+ + W D T PGGSSGGS+ AVA S+G+DTGGSIRQPA+F Sbjct: 61 GSTETSYFKKTKNAW---DHTK--VPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAF 115 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYG SR G+I+F SLDQ G TV+++A LL IA D DAT + + Sbjct: 116 NGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDATSAPVRI 175 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 DY + + I+GM + +PKEY + + P I +T + GA + E+SLPH++Y Sbjct: 176 ADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAAKQFEALGATVEEVSLPHSKYG 235 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + YYII+ +EASSNL R+DG+RYG R + K++ E+Y NTRS GFG EVK RIM+GT+ Sbjct: 236 VAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRRIMLGTFS 295 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD+++ +A ++RTLI DF + F D+IL PTTPT AF G + N + Sbjct: 296 LSSGYYDAYFKKAGQVRTLIIEDFDKVFAD-YDLILGPTTPTVAF--GLDTLNHDPVAMY 352 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Y + Sbjct: 353 LADLLTIPVNLAGLPGISIPAGFVD-GLPVGLQLIGPKYTEETIYQAAAAFEAVTDYHK 410 >gi|56477145|ref|YP_158734.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Aromatoleum aromaticum EbN1] gi|81598810|sp|Q5P4D0|GATA_AZOSE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|56313188|emb|CAI07833.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Aromatoleum aromaticum EbN1] Length = 490 Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 219/481 (45%), Positives = 307/481 (63%), Gaps = 14/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L ++ IS+VEL ++ IE ++ +NA+I V A AA +D RI GD Sbjct: 5 SLTELRAALDARKISSVELATLFLDRIERLDASLNAFITVDRDGALEAARAADARIAAGD 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L GIP+ KD F T+G+ T S +L F Y++ V L GAV LGK NMDEF Sbjct: 65 AGPLTGIPLAHKDVFCTEGVLTTCGSKMLANFVSPYDAHVVSLLKTAGAVSLGKTNMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S++GP +PW D+T PGGSSGGS+AAVA L + GTDTGGS+RQP Sbjct: 125 AMGSSNENSHFGPAKNPW---DTTR--IPGGSSGGSAAAVAARLVPIATGTDTGGSVRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ TG GIKPTYG SR G+I++A SLDQ G + D A LL A+AG+D D+T + Sbjct: 180 AALTGVTGIKPTYGVVSRYGMIAYASSLDQGGAFGASAADCAQLLTAMAGFDPRDSTSLE 239 Query: 248 LPVPDYER-----ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P DY R A + + G+ +G+PKE+ ++ + + + + GA V++ Sbjct: 240 RPAEDYSRELAAPAAARPLAGLRIGLPKEFFGAGMADDVRAAVEAALDGYRALGATTVDV 299 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLP+ Q A+PAYY+I+PAEASSNL+R+DGVRYG R E +D+ EMY +R+ GFG EVK Sbjct: 300 SLPNAQLAIPAYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLAEMYSKSRAEGFGAEVKR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS YD++YL+A+K+R LI +DF A G DVI PT+PT+A+ +G++ + Sbjct: 360 RILVGTYVLSHGYYDAYYLQAQKLRRLIAQDFQAAL-AGCDVIAGPTSPTTAWTIGEKSD 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M +D++T+AVN+AGLP +S P ++P+GLQL+G F E L + + Sbjct: 419 DPVQM--YLSDIYTIAVNLAGLPGLSHPCGFGAGELPVGLQLVGDYFSEARLLNAAHRFQ 476 Query: 482 K 482 + Sbjct: 477 Q 477 >gi|302816675|ref|XP_002990016.1| hypothetical protein SELMODRAFT_269599 [Selaginella moellendorffii] gi|300142327|gb|EFJ09029.1| hypothetical protein SELMODRAFT_269599 [Selaginella moellendorffii] Length = 554 Score = 358 bits (920), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 210/468 (44%), Positives = 296/468 (63%), Gaps = 20/468 (4%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFAT 84 +V Y+ + + +++ + + A A E D R+ GD L GIPI IKD T Sbjct: 91 IVTEYLDRLREKEPDVKSFLHI-SSSALDEAAEIDGRLARGDDPGPLAGIPIAIKDNLCT 149 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 +G+ + S ILDG+RP Y++T ++L ++GAV++GK N+DEF MGSS E+S Y +P Sbjct: 150 RGMPSTGGSRILDGYRPPYDATAVKRLKESGAVLIGKTNLDEFGMGSSTESSAYQVTSNP 209 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 W PGGSSGGS+AAVA CA ++G+DTGGSIRQPASF G VG+KPTYGR S Sbjct: 210 WDL-----SRVPGGSSGGSAAAVAAGQCACALGSDTGGSIRQPASFCGVVGLKPTYGRVS 264 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL------- 257 R G++++A SLD G + +V D ++LL AIAG+D DAT + VP+Y +AL Sbjct: 265 RFGLMAYASSLDVVGCLGTSVDDVSLLLTAIAGHDPADATSSSKVVPNYLKALVPAKELP 324 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + GM GI KE + + P + + + + L+ GA + E+SLP LPAYY++ Sbjct: 325 GNPLAGMKFGIIKETIGEGVEPAVAQVVKNAVVHLEKLGAVVQEVSLPTFSLGLPAYYVL 384 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 + +EASSNL+RYDG+RYG RV ++ MY +R GFG EVK RI++GTY LS+ YD+ Sbjct: 385 AASEASSNLSRYDGIRYGPRVVADELNAMYGASRGQGFGAEVKRRILMGTYALSAGYYDA 444 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 Y RA+++RTLI++DF +A E G ++++P P+ AF +G++ + SM D+ TV Sbjct: 445 FYKRAQQVRTLIQQDFKKALEDG-HILVSPVAPSPAFKIGEKVLDPLSM--YLGDLMTVN 501 Query: 438 VNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIEK 482 VNMAGLPA+S+P L E K+P+GLQLIG F EE L VG I E+ Sbjct: 502 VNMAGLPALSLPCGLIEDEGSKLPVGLQLIGNAFEEEELLRVGHIFEQ 549 >gi|326574615|gb|EGE24555.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis O35E] Length = 477 Score = 358 bits (920), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 214/487 (43%), Positives = 301/487 (61%), Gaps = 19/487 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A A+ +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAKLAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y++TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYDATVVDSIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPWDVQRVPGG-----SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL +AGYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTFGKSALDCAYLLAPMAGYDP 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT +N P DY A D + + G +G+ K Y L ++K+ + ++ ++ Sbjct: 236 KDATSINRPSEDYVADILATATDGKPLAGKKIGVAKAYFGAGLDSEVEKSIRTALAKYEE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSE 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT A Sbjct: 356 GFGAEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTPA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLI + + E Sbjct: 415 YKLGESLDPAS----IYLLDVYTIGVNLAGLPALSHPVGQAN-GLPVGLQLISKHWAESE 469 Query: 473 LFSVGQI 479 L I Sbjct: 470 LLKTAHI 476 >gi|19552468|ref|NP_600470.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glutamicum ATCC 13032] gi|62390134|ref|YP_225536.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glutamicum ATCC 13032] gi|39931594|sp|Q8NR17|GATA_CORGL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|21324014|dbj|BAB98640.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Corynebacterium glutamicum ATCC 13032] gi|41325470|emb|CAF19950.1| PROBABLE GLU-TRNA (GLN) AMIDOTRANSFERASE (SUBUNIT A) [Corynebacterium glutamicum ATCC 13032] Length = 497 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 210/492 (42%), Positives = 314/492 (63%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL +E + S+++++ E+ +++ I + ++A++ V ++A AA++ DK Sbjct: 12 NELTTKTAAELAGLIHSREVTSREVTQAHLDRIAAVDGDIHAFLHVGQEEALNAADDVDK 71 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ G+A L G+P+ +KD F T T A S +L+G+ Y++TVT+K+ + G +L Sbjct: 72 RLDAGEAPASALAGVPLALKDVFTTTDAPTTAASKMLEGYMSPYDATVTRKIREAGIPIL 131 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW ++ T + GGSS +A A +IGTD Sbjct: 132 GKTNMDEFAMGSSTENSAYGPTHNPW-DLERTAGGSGGGSSAALAAGQAPL----AIGTD 186 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D Sbjct: 187 TGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQGGPTARTVLDTALLHEVIAGHD 246 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT VN PV +A + ++G+ VG+ K++ D P + + + + ++ Sbjct: 247 AFDATSVNRPVAPVVQAAREGANGDLKGVKVGVVKQFDRDGYQPGVLEAFHASVEQMRSQ 306 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D E+ TR Sbjct: 307 GAEIVEVDCPHFDDALGAYYLILPCEVSSNLARFDGMRYGLRA-GDDGTRSADEVMAYTR 365 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++YL+A+++RTLI +DF +A+EQ VD++++PTTPT Sbjct: 366 AQGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIAQDFAKAYEQ-VDILVSPTTPT 424 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFR 469 +AF LG++ + M YN D+ T+ +N+AGL +S+P+ L + +P+GLQL+ F+ Sbjct: 425 TAFKLGEKVTDPLEM---YNFDLCTLPLNLAGLAGMSLPSGLASDTGLPVGLQLMAPAFQ 481 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 482 DDRLYRVGAAFE 493 >gi|312130300|ref|YP_003997640.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Leadbetterella byssophila DSM 17132] gi|311906846|gb|ADQ17287.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leadbetterella byssophila DSM 17132] Length = 467 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 202/477 (42%), Positives = 307/477 (64%), Gaps = 12/477 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M SE R+RL + + + E+VD++++ I+ S +N +++V ++AR A+E ++I NG Sbjct: 1 MQYSEYRERLFAGEWNLSEVVDTFLERIK-SYKHLNVFLDVYEEEARQKAKEISEKIKNG 59 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 +A L G+ IG+KD A K Q S ILDGF+ + +T Q+L + A+++G+ N DE Sbjct: 60 NAGRLAGMVIGLKDILAYKDHGLQCGSKILDGFQSQFTATAVQRLLNEDAIIIGRQNCDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSSNE S +GP ++ W + PGGSSG S+ AVA LC ASIG+DTGGS+RQ Sbjct: 120 FGMGSSNENSAFGPTLNFW-----NENKVPGGSSGASAVAVAAGLCHASIGSDTGGSVRQ 174 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P++F GTVG+KPTYGR SR G+ ++A S D G IT +V D+A+LL+ +AG DE D+T Sbjct: 175 PSAFNGTVGLKPTYGRISRWGLAAYASSFDCIGPITSSVADAALLLEVMAGKDEYDSTAS 234 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + P+ +++ +G KE + L + + I L+ G +IVE+ P Sbjct: 235 PI-APELYSDFTSNLEKKRIGYFKEALHSEGLDEGVKQATISKIEQLRSQGHEIVELDFP 293 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +Y LP YY ++ AEASSNL RYDGVRYG R + K++ E+Y+ TR GFG+EVK RI+ Sbjct: 294 ELKYLLPVYYTLTMAEASSNLNRYDGVRYGHRAKDAKNLEELYKKTRGEGFGKEVKRRIL 353 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT++LS+ YD++Y +A+++RTLI + + F++ VD IL+PTTP+ AF LG+ +N S Sbjct: 354 LGTFILSAEYYDAYYAKAQRVRTLIIQKTNDYFKE-VDFILSPTTPSPAFDLGR-KNVSA 411 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + ++ D++TV N+ G+PAIS+P + +P GLQ++ F E+ L + + IE Sbjct: 412 TEAYL-EDIYTVHANVCGIPAISIPNGKSPEGLPYGLQILAPSFAEKDLLNFAKHIE 467 >gi|315606215|ref|ZP_07881242.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Actinomyces sp. oral taxon 180 str. F0310] gi|315312103|gb|EFU60193.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Actinomyces sp. oral taxon 180 str. F0310] Length = 501 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 210/491 (42%), Positives = 314/491 (63%), Gaps = 18/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + + D L + DI++VEL + + I+ + ++ A+I V + A A A + D Sbjct: 1 MNDLLKKSALDLADMLAAGDITSVELTRACLDRIDAIDDRVRAFITVDREGALATAADVD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G D L G+PI IKD T+G+ T S IL ++P Y++TVT K+ + G ++ Sbjct: 61 ARRAAGEDLHRLAGVPIAIKDNIVTRGLRTTCASKILGDWKPPYDATVTAKIKEVGLPIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +G +PW + PGGS GGS+AAVA F+ ++G+D Sbjct: 121 GKTNMDEFAMGSSTEHSAFGATKNPWDL-----ERIPGGSGGGSAAAVAAFMVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA TGTVG KPTYG SR G+++ A SLDQ G +TRTV D+A L + I G+D Sbjct: 176 TGGSIRQPAFVTGTVGAKPTYGAVSRFGLVAMASSLDQIGPVTRTVADAAALTELIGGFD 235 Query: 240 ECDATCVNLPVPDYERALDQ-----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+T +N PVP +A++ S++G+ VG+ KE + + + + L++ Sbjct: 236 PNDSTSLNEPVPALTQAVESVAAQGSMKGLKVGVVKELSGEGYQKDVIDAFNATVEKLRE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 AGA+IV++S PH +Y+L AYY+I PAE SSNLAR+DG+RYG+RVE + + T Sbjct: 296 AGAEIVQVSCPHLEYSLGAYYLIMPAEVSSNLARFDGMRYGIRVEPTEGPVTAERVMAAT 355 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GT+VLS+ YD++Y A+K+RTLI+RDF FEQ VDV+++PT P Sbjct: 356 REAGFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLIQRDFDAVFEQ-VDVLVSPTAP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ ++ +M ++Y DV T+ N+AG+P ++VP A+ + +P+G Q++ + Sbjct: 415 ETAFKFGEKTSDPLAM-YLY-DVATIPANLAGIPGVNVPNAVSSQGLPIGFQVLAPARGD 472 Query: 471 ETLFSVGQIIE 481 ++ V ++E Sbjct: 473 LVMYKVASLVE 483 >gi|88855222|ref|ZP_01129887.1| glutamyl-tRNA amidotransferase subunit A [marine actinobacterium PHSC20C1] gi|88815750|gb|EAR25607.1| glutamyl-tRNA amidotransferase subunit A [marine actinobacterium PHSC20C1] Length = 504 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 208/490 (42%), Positives = 299/490 (61%), Gaps = 17/490 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL M+ SE RL S ++S+VE +++ I + Q+NA++ V AA ++ Sbjct: 5 NELTRMSASELAGRLSSGEVSSVEATQAHLDRISAVDGQVNAFLHVSTDALANAARIDER 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R +L G+PI IKD T + T A S IL+G+ P Y++T KL G + LGK Sbjct: 65 RAAGESLGELAGVPIAIKDVLCTIDMPTTAGSKILEGWVPPYDATPVAKLRAAGLIALGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S YGP +PW PGGS GGS+AAV+ F ++G+DTG Sbjct: 125 TNMDEFAMGSSTEHSAYGPTKNPWDL-----GRIPGGSGGGSAAAVSAFEAPLALGSDTG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS TG+VG+KPTYG SR G I+ A SLDQ G ++RTV D+A+L I G+D Sbjct: 180 GSIRQPASVTGSVGVKPTYGGVSRYGAIALASSLDQVGPVSRTVLDAAMLHDVIGGHDPR 239 Query: 242 DATCVNLPVPDY-----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T +N P + A +S++G+ VG+ K+ + + + + + L D G Sbjct: 240 DSTSLNEQWPSFAAAARAGAAAESLKGLRVGVIKQLDSPGFQAGVSQRFHEALQLLTDFG 299 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSI 353 A+IVE+ PH +YA+ AYY+I PAEASSNLA++D VR+GLRV G + ++ TR Sbjct: 300 AEIVEVDAPHFEYAVAAYYLILPAEASSNLAKFDSVRFGLRVTPEGGGTVEDVMAATREA 359 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AFE+ DV+++P+ PT+A Sbjct: 360 GFGPEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFAAAFEK-ADVLVSPSAPTTA 418 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F G++ + M NDV T+ N+AG+P + +P L E +P G Q++ + Sbjct: 419 FKFGEKLED--PMAMYLNDVTTIPANLAGVPGMGLPMGLAPEDGLPTGFQIMAPARGDAR 476 Query: 473 LFSVGQIIEK 482 L+ +G +E+ Sbjct: 477 LYELGATLER 486 >gi|207727545|ref|YP_002255939.1| glutamyl-trna(gln) amidotransferase subunit a (glu-adtsubunit a) protein [Ralstonia solanacearum MolK2] gi|206590782|emb|CAQ56394.1| glutamyl-trna(gln) amidotransferase subunit a (glu-adtsubunit a) protein [Ralstonia solanacearum MolK2] Length = 495 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 222/482 (46%), Positives = 312/482 (64%), Gaps = 23/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L +K++SAVEL Y+ IE + + +NA++ V A+ A A+ +D RI G A L GI Sbjct: 12 QLAAKEVSAVELARHYLSRIE-ARADLNAFVHVDAEATLAQAQAADARIAAGGAGPLAGI 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T+G A S +LD + +++TV ++L G V LGK NMDEFAMGSSNE Sbjct: 71 PIAHKDVFVTRGWRATAGSKMLDSYVSPFDATVVERLAAAGMVTLGKTNMDEFAMGSSNE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S++GPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPASF+G Sbjct: 131 NSHFGPVKNPWNV-----GHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGIT 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL----PV 250 GIKPTYGR SR G+I+FA SLDQ G + RT D A+LL A+AG+D D+T + Sbjct: 186 GIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARDSTSLEPGRGGDA 245 Query: 251 PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ R L Q ++ G+ +G+P+EY L+ + + ++ L+ GA +V+ Sbjct: 246 EDFGRLLGQPLEGADAARPLAGLRIGLPQEYFGAGLADDVRAAVRAALAELEKLGATLVD 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+ +MY +R+ GFG EVK Sbjct: 306 ISLPKTELSIPTYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLADMYRKSRAEGFGWEVK 365 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS YD++YL+A+KIR +I +DF AF+Q DVI+ P PT A+ LG++ Sbjct: 366 RRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFRNAFQQ-CDVIMGPVAPTVAWKLGEKT 424 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M D+FT++ ++AGLP +SVPA +P+GLQ+IG F E + + Sbjct: 425 DDPLQM--YLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQIIGNYFEEARMLQIAHAF 482 Query: 481 EK 482 ++ Sbjct: 483 QQ 484 >gi|297172138|gb|ADI23119.1| Asp-tRNAAsn/glu-tRNAGln amidotransferase A subunit and related amidases [uncultured gamma proteobacterium HF0770_09E07] Length = 475 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 202/477 (42%), Positives = 277/477 (58%), Gaps = 12/477 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M R+ RSK ISA E I + ++N +I +A AE D Sbjct: 1 MNFKLQRENFRSKKISAKEATQEAIDRAKKD--KLNIFINHFENEALLKAEHIDNNFDKF 58 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+PI KD F TK I T S +L+ F P YESTVT+ G++M+ K NMDE Sbjct: 59 KDLPLSGVPIAHKDIFCTKNITTTCGSKMLENFVPPYESTVTENCNAAGSIMIAKTNMDE 118 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSSNETS++G V +PW PGGSSGGS+A VA + + S GTDTGGSIRQ Sbjct: 119 FAMGSSNETSFFGSVSNPWGK-----NLVPGGSSGGSAACVAANITSISTGTDTGGSIRQ 173 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G G+KPTYG SR G+I+F S+DQAG R A LL A+A YD D+TC Sbjct: 174 PAALCGVTGMKPTYGLVSRWGMIAFCSSMDQAGPFARDAFGCAALLDAMASYDTKDSTCT 233 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +E++LD++ + +G+ K ++ I ++ L+ G ++ EI Sbjct: 234 KRKEICFEKSLDKNFGNLKIGVIKNIDDLGINKDILNAYENSKIALQGLGHQLSEIDFSE 293 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI 365 + +YY+I+PAE SSNL+R+DGV++G R E KDI ++Y TRS GFG EVK RI+I Sbjct: 294 LSSGICSYYVIAPAECSSNLSRFDGVKFGHRSKEQKDISDLYMQTRSEGFGDEVKKRILI 353 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+VLS+ YD++YLRA+K+R +IK F E F++ VD+I PTT AF +E ++ Sbjct: 354 GTHVLSAGFYDAYYLRAQKVRRMIKNKFEEIFKE-VDLIFMPTTLDQAFEKNRESSDPNR 412 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D+ T+ N+AGLPAIS P L + +P+G QLI F E+ L + I++ Sbjct: 413 M--YKEDLLTIPANLAGLPAISFPNGL-KNNLPIGGQLIANYFGEDLLLNTTNKIQE 466 >gi|158312939|ref|YP_001505447.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Frankia sp. EAN1pec] gi|158108344|gb|ABW10541.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Frankia sp. EAN1pec] Length = 518 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 207/425 (48%), Positives = 283/425 (66%), Gaps = 15/425 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD +G+ T S IL+G+RP Y++TV +L V+LGK+NMDEFAMG Sbjct: 95 LAGVPLALKDVLTARGMPTTCGSRILEGWRPPYDATVVSRLRAADVVILGKVNMDEFAMG 154 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS E S YGP +PW D T PGGSSGGS+AAVA F SIGTDTGGSIRQPA+ Sbjct: 155 SSTENSAYGPTRNPW---DLTR--IPGGSSGGSAAAVAAFEAPLSIGTDTGGSIRQPAAV 209 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYG SR G+++F+ SLDQAG + RTV D+A+L AIAG+D D+T V+LPV Sbjct: 210 CGLVGVKPTYGGVSRYGLVAFSSSLDQAGPLARTVGDAALLHAAIAGHDPLDSTSVDLPV 269 Query: 251 PD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P E A + I+G+ VG+ +E + P + + + L GA++VE+S PH Y Sbjct: 270 PPVVEAAARRDIRGLRVGVVRELSGEGYDPGVQAAFDAAVQELAGLGAEVVEVSCPHFTY 329 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMI 365 AL AYY+I+P+E SSNLAR+D +R+GLR G D E+ +TR +GFG EVK R+M+ Sbjct: 330 ALAAYYLIAPSECSSNLARFDAMRFGLRA-GDDGRAGAEEVMSHTRDVGFGAEVKRRVML 388 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LSS YD++Y +A+K+RTLI RDF A+E+ DV+++PTTPT AFPLG + ++ S Sbjct: 389 GTYALSSGYYDAYYGQAQKVRTLISRDFAAAYEK-ADVLVSPTTPTPAFPLGDKVDDPVS 447 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M +D+ T+ N+AG PA+S+PA L +P G+Q++ F ++ L+ VG +E Sbjct: 448 M--YLSDLCTIPSNLAGGPAMSLPAGLV-GGLPAGIQIMAPAFADDRLYLVGGALEAALE 504 Query: 486 YFRPH 490 R H Sbjct: 505 ARRGH 509 >gi|332799843|ref|YP_004461342.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Tepidanaerobacter sp. Re1] gi|332697578|gb|AEE92035.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Tepidanaerobacter sp. Re1] Length = 491 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 207/496 (41%), Positives = 310/496 (62%), Gaps = 19/496 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V+++ + L+ K+I + EL + I++++ Q+ AY+ + +A A +D++ Sbjct: 2 KLHELTVNKANELLKKKEIKSEELTSALFNRIDSTDGQIKAYVTLDKDRALETARLADEK 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + L GIP+ +KD TK + T CS +L+ F P Y++TV KL D AV+LGK Sbjct: 62 A--DFMQPLTGIPMAVKDNICTKDLKTTCCSKMLENFVPPYDATVISKLKDVNAVILGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSS E+S++ +PW + PGGSSGGS+AAVA ++G+DTGG Sbjct: 120 NMDEFAMGSSTESSFFQVTKNPWNL-----ECVPGGSSGGSAAAVAADESLYALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPA++ G VG+KPTYGR SR G+ + A ++D G IT+ V D AI+L AIAG D D Sbjct: 175 SIRQPAAYCGVVGLKPTYGRVSRFGVSALASTMDAIGPITKDVTDCAIVLSAIAGIDSFD 234 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK----TWQQGISWLKDAGAK 298 T ++ V DY + L + G+ +GIPKE+ LD + IDK + + G Sbjct: 235 PTSSDISVSDYLKCLHDELNGIKIGIPKEF-LD--NAVIDKDVKDAFLNAAKIYEKLGCV 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 EISL + +YAL AY+I AE+SS L +YDG+RYG R + +D+ ++Y+ +R GFG Sbjct: 292 CEEISLANAEYALWAYHITVAAESSSELGQYDGIRYGHRAAKYEDLKDLYKKSRGEGFGT 351 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI++GTY+ ++ YD +YL+A+KIRTLIK+DF AF + D+++TPT PT+AF +G Sbjct: 352 EVKRRIILGTYLSDAQNYDKYYLKAQKIRTLIKKDFENAFNK-YDLLITPTVPTTAFKIG 410 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ ++ M ND++T VN+AGLPAIS+P + +P+GLQ+IG+ F E ++ Sbjct: 411 EKIDDPLKM--YMNDLYTTPVNLAGLPAISIPCGFSD-GLPIGLQIIGKAFDEASILRAA 467 Query: 478 QIIEKEAGYFRPHKWW 493 E+ Y W Sbjct: 468 YAFEQNTSYHEKRIKW 483 >gi|326562147|gb|EGE12475.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella catarrhalis 7169] Length = 492 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 215/496 (43%), Positives = 304/496 (61%), Gaps = 19/496 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++V E D L++K S+ ELV+ + I + Q+N++I A A AE +D Sbjct: 1 MTDLHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAELAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K GD R L G+P+ KD TKG+ T A S +L F Y +TV + ++G V LG Sbjct: 61 KLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYHATVVDNIANSGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLNMDEFAMGS NE+SY+G V +PW D+T SSGGS+AAVA + G+DT Sbjct: 121 KLNMDEFAMGSDNESSYFGAVHNPW---DTTRVPGG--SSGGSAAAVAAGFVPVATGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG ++ D A LL + GYD Sbjct: 176 GGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGAFGKSALDCAYLLAPMTGYDA 235 Query: 241 CDATCVNLPVPDY-----ERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DAT ++ P DY A D + + G +GI + Y L ++K+ + ++ + Sbjct: 236 KDATSISRPSEDYVADILATATDGKPLAGKKIGIAQAYFGAGLDDEVEKSIRAALATYEA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 GAKIVE+ + L YY+++PAEASSNL+RYDGVR+G R E KD+ ++Y +RS Sbjct: 296 LGAKIVEVDITDPAITLATYYLLAPAEASSNLSRYDGVRFGYRCENPKDLHDLYTRSRSE 355 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EV+ RI++GTY LS+ +D++Y +A+K+R LI DF +AFE+ D+I +PT PT A Sbjct: 356 GFGAEVQRRIIMGTYALSAGYFDAYYTKAQKVRRLIVDDFKKAFEK-CDIIASPTAPTVA 414 Query: 414 FPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + LG+ + + IY DV+T+ VN+AGLPA+S P +P+GLQLI + + E Sbjct: 415 YKLGESLDPAS----IYLGDVYTIGVNLAGLPALSHPVGQAN-GLPVGLQLISKHWAESE 469 Query: 473 LFSVGQIIEKEAGYFR 488 L I + + + Sbjct: 470 LLKTAHIYQSHTDFHQ 485 >gi|187250490|ref|YP_001874972.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Elusimicrobium minutum Pei191] gi|186970650|gb|ACC97635.1| Glutamyl-tRNA(Gln) amidotransferase, A subunit [Elusimicrobium minutum Pei191] Length = 474 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 208/470 (44%), Positives = 297/470 (63%), Gaps = 11/470 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIIN 65 M E ++ ++AVE + ++ I+ N ++NA++EV Q+A A+E D K+ Sbjct: 1 MKAFEIVQAVKQGKLTAVEAARASLKIIKEKNPKINAFVEVFEQEALQRAKEIDAKKAAG 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + +L G+P+GIKD KG S +L Y TV QKL D A+++G+LNMD Sbjct: 61 KELGELAGVPVGIKDNLLYKGHKVTCASKMLLNHTAAYTGTVVQKLIDADAIIIGRLNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+ E S YGP +P +D T GSSGGS+AAVA + ++G+DTGGSIR Sbjct: 121 EFAMGSTTENSVYGPTKNP---IDHTRVAG--GSSGGSAAAVAAGMVPLTLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYGR SR GI++FA S DQ G + V+D+A+L K IA +DE D+T Sbjct: 176 QPASFCGIVGMKPTYGRVSRYGIVAFASSADQIGPLAGDVKDAALLFKVIADFDEKDSTV 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + PVPD +L +++G+ VGIP ++ D L+P I ++ + LK GA++ EISLP Sbjct: 236 SSAPVPDVLASLKNTLEGVKVGIPVDF-FDNLNPEIKDSFDRAKEILKSLGAELKEISLP 294 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIM 364 +Y+ P YY+I+ AEASSNL+R+DGVRYG ++ E+Y TR GFG EVK RIM Sbjct: 295 FAKYSAPCYYMITGAEASSNLSRFDGVRYGYSTPVPANLDEVYSKTRMEGFGMEVKRRIM 354 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IG YVLS Y++ ++A+++R+LI+++F +AF + VD+ILTPT+PT A G + Sbjct: 355 IGHYVLSREKYETCLVKAKEVRSLIRKNFKDAF-KNVDIILTPTSPTVATKQGAAVLD-- 411 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D++T NMA LP ISVPA ++ +P+GLQ F+E+ LF Sbjct: 412 QVNTYLADLYTCPGNMANLPGISVPAGNNKEGLPIGLQFYTDEFKEDVLF 461 >gi|226355750|ref|YP_002785490.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Deinococcus deserti VCD115] gi|259647210|sp|C1D1L2|GATA_DEIDV RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226317740|gb|ACO45736.1| putative Glutamyl-tRNA (Gln) amidotransferase subunit A [Deinococcus deserti VCD115] Length = 487 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 204/476 (42%), Positives = 286/476 (60%), Gaps = 24/476 (5%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATK 85 L+D + E + S +NA + + Q AAE S +R+ G+A L G+P+ +KD Sbjct: 24 LLDQAVARAEAA-STLNALVSLNEQAGAQAAEVS-RRLAGGEALPLAGVPVIVKDNINVS 81 Query: 86 GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW 145 G T S IL + Y +T Q+L D GAV++GK NMDEFAMGSS E+S GP ++PW Sbjct: 82 GTRTTCGSRILATYVSPYTATAAQRLIDAGAVIVGKANMDEFAMGSSTESSASGPTLNPW 141 Query: 146 RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 PGGSSGGS+ AVA L S+G+DTGGS+RQPA+ TG G+KPTYGR SR Sbjct: 142 DL-----SRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALTGVYGLKPTYGRVSR 196 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMT 265 G++++A SLDQ G R+ D A+L+ +AG+D DAT + P ++ + ++G+ Sbjct: 197 YGLVAYASSLDQIGPFARSAADLALLMNVVAGHDPRDATSLEAPA-RFQAGAPEDLKGLR 255 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSN 325 VG+ +E L + +D + L+ GA E+S+P +A+ AYY+I+ EASSN Sbjct: 256 VGVIRE-SLGGNTSAVDAALNTTLEALRAGGATTGEVSIPDLSHAIAAYYLIAMPEASSN 314 Query: 326 LARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI 385 LARYDG+ YG R G D+ E+ TR GFG+EV+ RIMIGTY LSS YD++Y +A K+ Sbjct: 315 LARYDGMVYGQRAPGSDVSEVMTLTREHGFGREVQRRIMIGTYALSSGYYDAYYSKAMKV 374 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 R LI ++F+ AF++ DV++TPT+P AF G E S + DV TVAVN+AGLPA Sbjct: 375 RRLIAQEFSRAFQE-YDVLVTPTSPFPAFRRG--EKTSDPLAMYAADVDTVAVNLAGLPA 431 Query: 446 ISVPAA--LCEK--KMPLGLQLIGQPFREETLFSVGQIIE--------KEAGYFRP 489 IS+PA L E ++P+G+Q I ++E L + +E AGY P Sbjct: 432 ISIPAGFDLAEGGVRLPVGVQFIAPALKDELLVQLAGALEGIGAVQLDSPAGYAAP 487 >gi|227832935|ref|YP_002834642.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Corynebacterium aurimucosum ATCC 700975] gi|262182576|ref|ZP_06041997.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium aurimucosum ATCC 700975] gi|227453951|gb|ACP32704.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Corynebacterium aurimucosum ATCC 700975] Length = 494 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 213/487 (43%), Positives = 315/487 (64%), Gaps = 22/487 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E +++ S+++++ E+ +++ I ++ ++NA++ V A++A AAA+ DK + G Sbjct: 14 LTAAELAEKIHSRELTSREVTQAFLDRIAETDGELNAFLHVGAEEALAAADAVDKSLDAG 73 Query: 67 D--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + A L G+P+ +KD T T A S +L+G+ Y++T+ KL + G +LGK N+ Sbjct: 74 EEPASALAGVPLALKDLLVTTDAPTTAASKMLEGWVSPYDATLVTKLREAGIPILGKTNL 133 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNE S YGP +P+ + + TPGGS GG++AA+A IGTDTGGSI Sbjct: 134 DEFAMGSSNENSAYGPAHNPYDT-----ERTPGGSGGGTAAALASGQAPLGIGTDTGGSI 188 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG+D DAT Sbjct: 189 RQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPTARTVLDTALLHEIIAGHDSFDAT 248 Query: 245 CVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V+ PV A + + G+ VG+ K++ D P + + + + LK GA+IV Sbjct: 249 SVDKPVAPVVAAAKEGANGDLSGVKVGLIKQFERDGWQPGVMEAYHAAVEQLKSQGAEIV 308 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFG 356 E+ PH AL AYY+I P E SSNLAR+DG+RYGLRV G D E+ +R+ GFG Sbjct: 309 EVDCPHFDDALAAYYLIMPCEVSSNLARFDGMRYGLRV-GDDGTHSAEEVMSLSRAAGFG 367 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RIM+GTY LS YD++YL+A+++RTLI +DF AFEQ VDV+++PTTPT+AF L Sbjct: 368 PEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLIAQDFERAFEQ-VDVLVSPTTPTTAFKL 426 Query: 417 GKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 G++ + M YN D+ T+ +N+AG+ +SVP+ + + +P GLQ++ F+++ L+ Sbjct: 427 GEKVEDPMEM---YNFDLCTLPLNLAGVCGMSVPSGMASDTNLPTGLQIMAPAFKDDRLY 483 Query: 475 SVGQIIE 481 VG E Sbjct: 484 KVGAAYE 490 >gi|291396713|ref|XP_002714921.1| PREDICTED: glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Oryctolagus cuniculus] Length = 527 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 200/490 (40%), Positives = 292/490 (59%), Gaps = 23/490 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ ++ EL + I+ + +NAYI V + A AE S+KR G + DL+GI Sbjct: 13 LKRGQVTPTELCQKCLALIQKTKF-LNAYITVSEEAALKQAEASEKRYKKGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTTGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW--------------RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 +GPV +PW R + +D GGSSGGS+AAV+ F C A++G+DT Sbjct: 132 DGVFGPVKNPWSYSKQYREKRKQKPRDENDSDWLITGGSSGGSAAAVSAFTCFAALGSDT 191 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PA+ G +G KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D Sbjct: 192 GGSTRNPAAHCGLIGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDTAIVLGVLAGHDP 251 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V PV + + + +GIPKEY + LSP + W + GAK+ Sbjct: 252 KDSTTVQGPVNSFLLPSLTDVSKLCIGIPKEYLVPELSPEVRSLWSKAADLFDSEGAKVK 311 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEV 359 E+SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF V Sbjct: 312 EVSLPHTCYSIVCYHVLCTSEVASNMARFDGLEYGHRCDIDISTEAMYATTRREGFNDVV 371 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---L 416 + RI+ G + L Y+ ++++A+K+R LI DF F GVDV+LTPTT A P Sbjct: 372 RGRILSGNFFLLKENYEDYFIKAQKVRRLIANDFVNVFNSGVDVLLTPTTLREAVPYLEF 431 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 +E+N + S +D+FT AVNMAGLPA+++P AL + +P+GLQ IG F ++ L +V Sbjct: 432 IQEDNRTRSA---QDDIFTQAVNMAGLPAVNIPVALSRQGLPIGLQFIGPAFCDQQLLTV 488 Query: 477 GQIIEKEAGY 486 + E++ + Sbjct: 489 AKWFEQQVQF 498 >gi|282165110|ref|YP_003357495.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanocella paludicola SANAE] gi|282157424|dbj|BAI62512.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanocella paludicola SANAE] Length = 460 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 216/448 (48%), Positives = 287/448 (64%), Gaps = 20/448 (4%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILD 97 +S++NAYI + + A A + D ++G L G+ + +KDC TKG+ T S IL Sbjct: 17 HSKLNAYITLDKEGALETAGKVDDGKVSG---RLAGMTVAVKDCITTKGLLTTCGSKILS 73 Query: 98 GFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPG 157 G+ P +++ V +L GAV+ GK NMDEFAMG+S E+SYYGP +PW D T PG Sbjct: 74 GYVPPFDAEVVARLRKEGAVITGKTNMDEFAMGTSTESSYYGPTKNPW---DLTR--VPG 128 Query: 158 GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ 217 GSSGGS AAVAG C ++GTDTGGS+R PASF G VGIKPTYG SR G+I++A SL+Q Sbjct: 129 GSSGGSGAAVAGLECRMALGTDTGGSVRCPASFCGVVGIKPTYGLVSRYGVIAYANSLEQ 188 Query: 218 AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL 277 G + R V D+A+LL IAG+D D+T V Y L + ++G+T+G+PKEY + Sbjct: 189 VGPMARNVSDAALLLDVIAGHDPKDSTSVPHDAC-YTDHLVEDVKGLTIGVPKEYFGEGT 247 Query: 278 SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 +D I L GA E+SLPHT+YAL AYYII+ EASSNLAR+DG+RYGLR Sbjct: 248 DKKVDNAVWSAIMKLDKLGADYKEVSLPHTKYALSAYYIIAMCEASSNLARFDGLRYGLR 307 Query: 338 VEGKDILEMYENT----RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 + GKD E + T R+ GFG+EVK RIM+GTY LS Y +YL+A K+RTLIK+DF Sbjct: 308 I-GKD--ENWHTTFSRIRAEGFGEEVKRRIMLGTYALSEGYYGKYYLKALKVRTLIKQDF 364 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 + F +GVDV+ PT PT+AF +G+ ++ SM D+ TV VN+AG+P+ISVP Sbjct: 365 EKVF-KGVDVLAAPTMPTTAFKIGEHADDPLSM--YMADIDTVPVNLAGVPSISVPCGFA 421 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIE 481 K+P+G+Q IG F E + E Sbjct: 422 -GKLPIGIQFIGGFFDEPKIIRTAHTYE 448 >gi|312140507|ref|YP_004007843.1| glutamyl-tRNA(gln) amidotransferase subunit a gata [Rhodococcus equi 103S] gi|311889846|emb|CBH49163.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Rhodococcus equi 103S] Length = 494 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 211/493 (42%), Positives = 312/493 (63%), Gaps = 17/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++ ++ S++IS+VE +++ I + +++A++ V ++A AA+E D Sbjct: 3 TDLTRLDAADLASKIHSREISSVEATQAHLDRIAKVDGELHAFLHVAGEQALVAAKEVDS 62 Query: 62 RIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I GD L G+PI +KD F T + T S IL+ + Y++T+T KL + G +L Sbjct: 63 AIAAGDKPVSALAGVPIALKDVFTTTDMPTTCASKILENWVSPYDATLTTKLREAGIPIL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW D+T PGGS GGS+AA+A + +IGTD Sbjct: 123 GKTNMDEFAMGSSTENSAYGPTRNPW---DTTR--IPGGSGGGSAAALASYQAPLAIGTD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + +AGYD Sbjct: 178 TGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVVAGYD 237 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T VN PV A Q ++G+ VG+ KE D P + ++ + L Sbjct: 238 PRDSTSVNEPVRPVVEAARQGATGDLKGVRVGVVKELHSDSYQPGVIASFDAAVEQLTAL 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSI 353 GA++VE+S P+ +AL AYY+I P+E SSNLAR+D +RYGLRV+ ++ ++ TR+ Sbjct: 298 GAEVVEVSCPNFLHALAAYYLILPSEVSSNLARFDAMRYGLRVDDGNMSAEQVMAATRAA 357 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG+EVK RIMIGTY LSS YD++Y A K+RTLI RDF A+E+ VDV+++PT+P + Sbjct: 358 GFGKEVKRRIMIGTYALSSGYYDAYYGSALKVRTLIARDFDAAYEK-VDVLVSPTSPFTP 416 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREET 472 + LG++ ++ +M +D+ T+ N+AG A+SVP+ + + +P+GLQ++ +E Sbjct: 417 WKLGEKVDDPLAM--YLSDLCTLPTNLAGHCAMSVPSGVSADDGLPVGLQIMAPALADER 474 Query: 473 LFSVGQIIEKEAG 485 L+ VG E G Sbjct: 475 LYRVGAAYEAARG 487 >gi|154507528|ref|ZP_02043170.1| hypothetical protein ACTODO_00007 [Actinomyces odontolyticus ATCC 17982] gi|153799317|gb|EDN81737.1| hypothetical protein ACTODO_00007 [Actinomyces odontolyticus ATCC 17982] Length = 501 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 213/491 (43%), Positives = 314/491 (63%), Gaps = 18/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + E D L + I++VEL + + I+ ++NA+I V + A AAA + D Sbjct: 1 MNELLKKSALELADMLAAGQITSVELTQACLDRIDAIEDRVNAFITVDREGALAAAADVD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+PI +KD T+G+ T S IL + P Y++TVT K+ + G ++ Sbjct: 61 ARRAAGETLHRLAGVPIAVKDNVVTRGLRTTCASKILGDWEPPYDATVTAKIKEAGLPIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +G +PW T++ PGGS GGS+AAVA ++ ++G+D Sbjct: 121 GKTNMDEFAMGSSTEHSAFGATKNPW----DTERI-PGGSGGGSAAAVAAYMVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA TGTVG KPTYG SR G+++ A SLDQ G +TRTV D+A L + I GYD Sbjct: 176 TGGSIRQPAFVTGTVGAKPTYGAVSRFGLVAMASSLDQIGPVTRTVADAAALTELIGGYD 235 Query: 240 ECDATCVNLPVPDYERALDQ-----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+T +N PVP A++ S++G+ VG+ KE + + + + L++ Sbjct: 236 PNDSTSLNEPVPALTEAVESVAAQGSMKGLKVGVVKELSGEGYQKDVIDAFNATVEKLRE 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 AGA+IVE+S PH +Y+L AYY+I PAE SSNLAR+DG+RYG+RVE + + T Sbjct: 296 AGAEIVEVSCPHLEYSLGAYYLIMPAEVSSNLARFDGMRYGIRVEPTEGPVTAERVMAAT 355 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GT+VLS+ YD++Y A+K+RTLI+RDF FEQ VDV+++PT P Sbjct: 356 REAGFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLIQRDFDAVFEQ-VDVLVSPTAP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +AF G++ ++ +M ++Y DV T+ N+AG+P ++VP A+ + +P+G Q++ + Sbjct: 415 ETAFKFGEKTSDPLAM-YLY-DVATIPANLAGIPGVNVPNAVSSEGLPIGFQVLAPARGD 472 Query: 471 ETLFSVGQIIE 481 ++ V ++E Sbjct: 473 LVMYKVASLVE 483 >gi|226226953|ref|YP_002761059.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Gemmatimonas aurantiaca T-27] gi|226090144|dbj|BAH38589.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Gemmatimonas aurantiaca T-27] Length = 465 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 200/431 (46%), Positives = 281/431 (65%), Gaps = 13/431 (3%) Query: 56 AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 A + D G L G+P+ IKD AT + T S +L+G+ +E+T +KL + G Sbjct: 35 AVDRDATTAEGATGALVGVPVAIKDNLATLSLPTTCASRVLEGYVSPFEATAVRKLREAG 94 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 AV++GK NMDEFAMGSS E S YGP ++P +D T PGGSSGGS+AAVA + + Sbjct: 95 AVIIGKTNMDEFAMGSSTENSAYGPTLNP---LDRTR--VPGGSSGGSAAAVASGVVRIA 149 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G++TGGS+RQPA+F G VG+KPTYGR SR G++++A SLD G+ TV ++A+ L+ I Sbjct: 150 LGSETGGSVRQPAAFCGIVGVKPTYGRVSRYGLVAYASSLDNVGVFGSTVAEAALGLETI 209 Query: 236 AGYDECDATCVNLPVPDYERALD----QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 AG+D D+T +LPVP L+ + + G+ VG P+EY L P I ++ ++ Sbjct: 210 AGHDHFDSTSADLPVPSMVPVLEAGNARPLAGLVVGKPREYFPANLDPRIAAHCERALAQ 269 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L GA++ ++SLP T A+P YYII+PAEASSNLARYDGVRYG+RV+ ++ MYE +R Sbjct: 270 LVALGAEVRDVSLPSTDLAVPVYYIIAPAEASSNLARYDGVRYGVRVDADNLRSMYEGSR 329 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S GFG EV RI++GTYVLS+ YD++Y RA+ +RTLI ++F F GV ++ TPTTPT Sbjct: 330 SRGFGAEVTRRILLGTYVLSAGYYDAYYKRAQAVRTLITQEFANVFASGVHLLFTPTTPT 389 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 AF LG E ++ M +D+FTV N+AG+PA+S P L + +P+G Q + F E Sbjct: 390 PAFRLG-ELSDPYEM--YLSDIFTVTANLAGVPAMSQPIGLVD-GLPVGGQFMAPHFAEP 445 Query: 472 TLFSVGQIIEK 482 T+F +E Sbjct: 446 TMFHAAAALES 456 >gi|213964451|ref|ZP_03392651.1| glutamyl-tRNA [Corynebacterium amycolatum SK46] gi|213952644|gb|EEB64026.1| glutamyl-tRNA [Corynebacterium amycolatum SK46] Length = 507 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 211/487 (43%), Positives = 317/487 (65%), Gaps = 21/487 (4%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--A 68 E ++ ++++++VE+ +++ I + ++A++ V A++A AAA + D+ + G+ A Sbjct: 27 ELAQKIHARELTSVEVTQAFLDRIAAIDEDIHAFLHVGAEEALAAARKVDESLDAGEEPA 86 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ +KD F T T S +L+G+ Y++TVT KL G +LGK NMDEFA Sbjct: 87 SALAGVPLALKDVFTTTDAPTTCASKMLEGYMSPYDATVTAKLRAAGIPILGKTNMDEFA 146 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSS E S YGP +PW + T GGS GGSSAA+A + +IGTDTGGSIRQPA Sbjct: 147 MGSSTENSAYGPTHNPWDV-----ERTAGGSGGGSSAALASGMAPLAIGTDTGGSIRQPA 201 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+DE D+T Sbjct: 202 ALTATVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEIIAGHDENDSTSTEQ 261 Query: 249 PVPDYERALDQ----SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+ D A + + G+ VGI K++ R + + ++ + + LK+AGA++VE+ Sbjct: 262 PIADVVAAAKEGATGDLTGVKVGIVKQFDRTEGYQAGVLDSFHEAVDKLKEAGAEVVEVD 321 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEV 359 P+ +AL AYY+I P E SSNLAR+DG+RYG RV G D E+ TR+ GFG EV Sbjct: 322 CPNFDHALSAYYLILPCEVSSNLARFDGMRYGQRV-GDDGTHSADEVMAMTRAAGFGDEV 380 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI+IGTY LS YD++Y++A+++RTLI++DF AFE+ VDV+++PTTPT+AF LG++ Sbjct: 381 KRRIIIGTYALSVGYYDAYYIQAQRVRTLIQQDFERAFEK-VDVLISPTTPTTAFKLGEK 439 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQ 478 ++ SM +++ D+ T+ +N+AG+ +SVP+ L E +P+GLQ++ ++ L+ VG Sbjct: 440 VDDPLSM-YMF-DLCTLPLNLAGMCGMSVPSGLAEDTGLPVGLQIMAPRHGDDRLYKVGA 497 Query: 479 IIEKEAG 485 EK G Sbjct: 498 AYEKVRG 504 >gi|325110075|ref|YP_004271143.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Planctomyces brasiliensis DSM 5305] gi|324970343|gb|ADY61121.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Planctomyces brasiliensis DSM 5305] Length = 476 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 201/468 (42%), Positives = 292/468 (62%), Gaps = 19/468 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 LR + +A E + + + N + A++ + + A E L G+ Sbjct: 14 HLREQPSAAAETWQRFRKRAGDRNEAVGAFLSLADEAQPETAAEGV----------LAGV 63 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD T T S +L F YE+TV +L GA ++GK+N+DEFAMGSS E Sbjct: 64 PVAVKDNICTAEQKTTCASKMLANFEAPYEATVVSRLKQAGAAIVGKVNLDEFAMGSSTE 123 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S G +PW+ K+ PGGSSGGS+AAVA + + ++G+DTGGSIRQPA+F G V Sbjct: 124 NSALGTTNNPWKL-----KYVPGGSSGGSAAAVAAGMASVALGSDTGGSIRQPAAFCGVV 178 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR G+++FA SLDQ G +R V SA L+AIAG+D D+T ++ PVP+Y Sbjct: 179 GLKPTYGRVSRYGLVAFASSLDQIGPFSRDVYGSAATLQAIAGHDPLDSTSLDKPVPNYL 238 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 LDQ ++G+ +G +E+ D + ++ + QQ + + GA+IV +SLPH+QY + Y Sbjct: 239 ETLDQPLEGLKLGFIEEWLGDGVDDSVRQAVQQAVDVYRKLGAEIVPVSLPHSQYGVATY 298 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+P+EASSNLARYDG+ YG R E + L E+Y +RS GFG+EVK RIM+G Y LSS Sbjct: 299 YIIAPSEASSNLARYDGIHYGHRAENCETLAEVYRKSRSEGFGEEVKRRIMLGCYALSSG 358 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A K+R L+++D+ +AF VD+++ P TP AF G ++ M D+ Sbjct: 359 YYDAYYLKALKVRRLVQQDYFKAFAD-VDLLIGPVTPGPAFERGAMIDDPLEM--YMADI 415 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 FT+ N+AG+PAIS+PA + + +PLG+QL+G EE L ++ E Sbjct: 416 FTIGANLAGIPAISLPAGMTDSGLPLGVQLLGPVLGEEKLLRAARMFE 463 >gi|94984867|ref|YP_604231.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Deinococcus geothermalis DSM 11300] gi|166217666|sp|Q1J0C2|GATA_DEIGD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|94555148|gb|ABF45062.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Deinococcus geothermalis DSM 11300] Length = 483 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 195/444 (43%), Positives = 278/444 (62%), Gaps = 14/444 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +NA I + +A A R+ G+ L G+PI +KD G T S IL + Sbjct: 38 LNALISL-NDRADEQAARVQVRLDAGETLPLAGVPIVVKDNLNVIGTRTTCGSRILANYV 96 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 Y++T ++L GAV++GK NMDEFAMGSS E+S +GP ++PW + PGGSS Sbjct: 97 SPYDATAVERLTGAGAVIIGKANMDEFAMGSSTESSAWGPTLNPWDR-----ERVPGGSS 151 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GGS+ AVA L ++G+DTGGS+RQPA+FTG G+KPTYGR SR G++++A SLDQ G Sbjct: 152 GGSAVAVAANLTPVALGSDTGGSVRQPAAFTGIYGLKPTYGRVSRYGLVAYASSLDQIGP 211 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 R+ D A+L+ +AG+D DAT ++ P P + +QG+ VG+ +E L+ +P Sbjct: 212 FARSAADLALLMNVLAGHDPRDATSLDAP-PAFRPGTPDDLQGLRVGVIREA-LEGNTPG 269 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 ++ + L+ AGA + E+S+P Q+A+ AYY+I+ EASSNLARYDG+ YG RV Sbjct: 270 VEAALNATLDALRGAGATVREVSVPSVQHAIAAYYLIATPEASSNLARYDGMVYGERVSA 329 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 D + TR GFG+EVK RIM+GTY LSS YD++Y +A K+R LI +DF AF Sbjct: 330 PDAVSSMTLTREQGFGREVKRRIMLGTYALSSGYYDAYYSKAMKVRRLIAQDFARAFGN- 388 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKM 457 VDV++TPT+P AF G++ + +M DV TVA+N+AGLPA+SVPA ++ Sbjct: 389 VDVLVTPTSPFPAFRRGEKTQDPLAM--YAADVDTVAINLAGLPALSVPAGFERVDGVRL 446 Query: 458 PLGLQLIGQPFREETLFSVGQIIE 481 P+G+QLI P ++E L ++ +E Sbjct: 447 PVGVQLIAPPLQDERLVALAGGLE 470 >gi|241667701|ref|ZP_04755279.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876245|ref|ZP_05248955.1| glu-tRNAGln amidotransferase A subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842266|gb|EET20680.1| glu-tRNAGln amidotransferase A subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 481 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 206/466 (44%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +++AVEL Y+ I++ + +N+ I + +A AE +D I G Sbjct: 4 IKKLRARLDSGEVTAVELTKQYLAKIKDQDKSINSVITLCEAEALKEAENADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 SLLTGIPILHKDLFCTKGIKTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW +D PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPW-DLDR----VPGGSSGGSAAAVAAGFAPVSTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KPTYG SR G+++FA S DQAGI D AI+L AI+G + D+TCV + Sbjct: 179 SFCGLTAMKPTYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAISGECQYDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KENHFTQDLEKDISGKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG+EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGEEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R L+ + FEQ VDVI P P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKLMTDQINQIFEQ-VDVIFMPAAPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G Q + + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NDLPVGGQFMAKAFNDNVL 458 >gi|255533716|ref|YP_003094088.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pedobacter heparinus DSM 2366] gi|255346700|gb|ACU06026.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pedobacter heparinus DSM 2366] Length = 489 Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 198/483 (40%), Positives = 293/483 (60%), Gaps = 19/483 (3%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + ++ E + + K++S +L+D Y + IE + +NA+ EV A A+ ++I Sbjct: 6 YNSLKEIQSLIEQKELSLPDLLDYYFKQIEK-HQHLNAFNEVFFYSATNQAKLVQEKIAQ 64 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L G+ IGIKD K A S +L+GF Y +TV ++L AV++G+LN D Sbjct: 65 GTAGKLAGMVIGIKDNICYKDHQVSASSKMLEGFVSPYSATVVERLIAEDAVIIGRLNCD 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG SNETSYYGPV ++ ++K GGSSGGS+ AV LC +++GTDTGGS+R Sbjct: 125 EFAMGGSNETSYYGPV----KNAADSEK-VAGGSSGGSAVAVQADLCLSALGTDTGGSVR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F G +G+KPTYGR SR G+I++A S DQ G IT +V D+++LL+ +AG D+ D+T Sbjct: 180 QPAAFCGCIGLKPTYGRISRYGVIAYASSFDQVGTITSSVGDASVLLEVLAGADDYDSTV 239 Query: 246 VNLPVPDYERAL--------DQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAG 296 LPVPDY+ L + + + + KE + L I I LK+ G Sbjct: 240 AKLPVPDYQAGLLADSAAFGKGTFKKKKIAVLKETLESEALDTDIKNAILNAIGELKEQG 299 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGF 355 I +S Y +PAYY+++ AEASSNL+RYDGV YG R +E + E+Y+ +R+ GF Sbjct: 300 HTIEFVSFDLLDYLVPAYYVLTTAEASSNLSRYDGVHYGHRNMEATSLNELYKLSRAEGF 359 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+EVK RI++GT+VLS+ YD++Y +A+++R LI+ E + DVI++P PT AF Sbjct: 360 GEEVKRRILLGTFVLSAGYYDAYYQKAQQVRRLIREKMEELLTR-FDVIISPVAPTPAFK 418 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +G EN + D+FTV ++ G+PAI+VP +PL +QL+ + F E+ L S Sbjct: 419 IG--ENIDDPLVMYMADIFTVLASLTGIPAIAVPLGNNYSGLPLSVQLMARHFGEQDLLS 476 Query: 476 VGQ 478 + Sbjct: 477 LAH 479 >gi|167627139|ref|YP_001677639.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189045249|sp|B0TWN0|GATA_FRAP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|167597140|gb|ABZ87138.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 481 Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 206/466 (44%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +++AVEL Y+ I++ + +N+ I + +A AE +D I G Sbjct: 4 IKKLRARLDSGEVTAVELTKQYLAKIKDQDKSINSVITLCEAEALKEAENADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 SLLTGIPILHKDLFCTKGIKTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW +D PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPW-DLDR----VPGGSSGGSAAAVAAGFAPVSTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KPTYG SR G+++FA S DQAGI D AI+L AI+G + D+TCV + Sbjct: 179 SFCGLTAMKPTYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAISGECQYDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +GI + D L I + + + K GA+I + +P + Sbjct: 239 KENHFTQDLEKDISGKVIGIDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG+EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGEEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + FEQ VDVI P P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFEQ-VDVIFMPAAPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G Q + + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NDLPVGGQFMAKAFNDNVL 458 >gi|256420379|ref|YP_003121032.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chitinophaga pinensis DSM 2588] gi|256035287|gb|ACU58831.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chitinophaga pinensis DSM 2588] Length = 479 Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 199/490 (40%), Positives = 298/490 (60%), Gaps = 34/490 (6%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE + ++S + L + + E+V Y+ I +NAY+EV ++A A A D Sbjct: 1 MSE--YSSISAFHEALYAGRTTCTEMVRYYLDRI-GQTKHLNAYLEVFEEEALAKAHALD 57 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI NG++ L GI IGIKD KG A S IL+GF Y +T ++L A+++ Sbjct: 58 TRIKNGESVGALAGIVIGIKDVICYKGHKVSAASRILEGFTSLYSATAVERLLAEDAIII 117 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G LN DEFAMGS+NE S YGPV++ ++D++ PGGSSGGS+ AV LC S+G+D Sbjct: 118 GNLNCDEFAMGSTNENSAYGPVLN---ALDNSR--VPGGSSGGSAVAVQADLCMVSLGSD 172 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPA F G VG+KPTYGR SR G+I++A S DQ GI R + D A +L+ IAG D Sbjct: 173 TGGSVRQPADFCGIVGLKPTYGRISRYGLIAYASSFDQIGIFGRNIADVARVLQFIAGPD 232 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-----SPTIDKTWQQGISW--- 291 E D+T N VPDY+ ++S +++ YL P +D+ ++G + Sbjct: 233 EYDSTASNEEVPDYQIVHNKS-----------WKIAYLRDALFHPGLDEEMKEGYTRFFE 281 Query: 292 -LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYE 348 L+ AG + + Y +PAYY+++ AEASSNL+R+DGV+YG R + ++ + Y+ Sbjct: 282 ELEAAGDTVTAADFAYLDYVVPAYYVLTTAEASSNLSRFDGVKYGHRTSLNNLELADFYK 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 +RS GFG+EVK RI++GT+VLS+ YD+++ +A+++R ++ E + D I+ PT Sbjct: 342 KSRSEGFGKEVKRRILLGTFVLSAGYYDAYFAKAQQVRRMVVDKLNEILSE-YDAIVMPT 400 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P++AF +G++ N+ +M D++TV N+AG+PAISVP MP G+Q+I + F Sbjct: 401 VPSTAFKIGEKTNDPIAM--YLADIYTVLANLAGVPAISVPLQRHSNGMPYGVQIITKQF 458 Query: 469 REETLFSVGQ 478 E L S+ + Sbjct: 459 SEANLLSIAE 468 >gi|332295473|ref|YP_004437396.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Thermodesulfobium narugense DSM 14796] gi|332178576|gb|AEE14265.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Thermodesulfobium narugense DSM 14796] Length = 481 Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 203/480 (42%), Positives = 297/480 (61%), Gaps = 15/480 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+N ++ + + +++ EL+D + I+ +S++N++I + + A A E + Sbjct: 2 EINDFTINSIKSEYKKGNLTPKELLDYVFKGIKLYDSKINSFITLTEEYAYKAIES--LK 59 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + D + L GIP+ IKD +G T S IL+ F P Y +T Q+L D GA+++GK Sbjct: 60 LDEIDLKPLWGIPVAIKDNMCFRGFKTTCSSKILENFIPIYTATAVQRLIDAGAIIVGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S + +PW + PGGSSGGS++AVA + G+DTGG Sbjct: 120 NLDEFAMGSSTENSAFFTTSNPWDL-----ERVPGGSSGGSASAVAARFVPLATGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPASF G VG KPTYG SR G+++FA SLDQ G V+D + ++G D+ D Sbjct: 175 SIRQPASFCGVVGFKPTYGTVSRYGLVAFASSLDQIGPFGTKVKDVELAFSVMSGKDDMD 234 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +T P +++++I+ VG+ KE Y + + + I LK G K+ Sbjct: 235 STSH----PYQFTSVNRNIKEYKVGVIKELYEAEGFDIEVLNSLNNVIKILKSEGLKVDV 290 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 SLPH +Y+LP YY+++ +EASSNLAR+DGVRYGLRVEGKDI+E + TR GFG EVK Sbjct: 291 CSLPHLKYSLPVYYLVATSEASSNLARFDGVRYGLRVEGKDIIETFSKTRGQGFGSEVKR 350 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+GTY LSS YD++YL+A K+RTLI DF +AF + D ++ PT+PT+AF G + + Sbjct: 351 RIMLGTYALSSGYYDAYYLKASKVRTLIVNDFEKAFRE-YDFLICPTSPTTAFKKGDKTS 409 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + SM +D+ T+ VN+AGLP IS+P+ K +P+GLQ+IG+PF + + + +E Sbjct: 410 DPLSM--YLSDIATIPVNLAGLPGISIPSGCDNKGLPIGLQIIGRPFNDSEVLNFADQLE 467 >gi|171464296|ref|YP_001798409.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193834|gb|ACB44795.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 505 Score = 355 bits (912), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 207/479 (43%), Positives = 292/479 (60%), Gaps = 29/479 (6%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 ++S+VEL ++ IE + + NAY++V + A ++D+ I +G + L GIP+ K Sbjct: 19 EVSSVELTQYFLDRIE-AGRRWNAYLDVNTHLSLKQANKADQLISSGKSGKLTGIPVAHK 77 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKL--------WDNGAVMLGKLNMDEFAMGS 131 D F T+G + A S IL G++ +++TV L G V LGK NMDEFAMGS Sbjct: 78 DVFVTRGWKSTAASKILAGYQSPFDATVVANLGIPDEINPHGAGMVCLGKTNMDEFAMGS 137 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 SNE S +G V++PW + SSGGS+AAVA L + GTDTGGSIRQPA+F Sbjct: 138 SNENSAFGLVLNPWNAAHVAGG-----SSGGSAAAVAAGLAPIATGTDTGGSIRQPAAFC 192 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G GIKP+YGR SR G+I++A SLDQAG + +T D A+LL ++ YD D+T + Sbjct: 193 GLTGIKPSYGRVSRYGMIAYASSLDQAGPMGKTAEDCALLLSVMSSYDPRDSTSLADSGE 252 Query: 252 DYERALDQS-----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DY R L+Q ++G+ V +PKE+ + L+ + K+ + L++ GA +V Sbjct: 253 DYGRYLNQDWKEGNANSAKPLEGLRVSLPKEFFAEGLANDVAKSVNEAAKLLENLGATLV 312 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEV 359 E+SLP T+ ++ YY+++PAEASSNL+R+DGVRYG R D +MY +R+ GFG EV Sbjct: 313 EVSLPKTKLSISVYYVLAPAEASSNLSRFDGVRYGYRANDYCDFGDMYAKSRTEGFGSEV 372 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIMIGTYVL YD++YL+A+KIR +I DF AF Q DVIL P P A+ LG++ Sbjct: 373 KRRIMIGTYVLCHGYYDAYYLQAQKIRRIIAADFQTAFNQ-CDVILGPVAPDVAWRLGEK 431 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + M D++T++ N+AGLPA+SVP +P+G+QLIG F E L V Sbjct: 432 SKDPVQM--YLEDIYTLSTNLAGLPAMSVPCGFSGNNLPIGMQLIGNYFSEARLLQVAH 488 >gi|172040415|ref|YP_001800129.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium urealyticum DSM 7109] gi|171851719|emb|CAQ04695.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit [Corynebacterium urealyticum DSM 7109] Length = 502 Score = 355 bits (912), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 210/492 (42%), Positives = 314/492 (63%), Gaps = 21/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +E +++ S++IS+VE+ +++ I + + ++NA+I V A +A AAA D Sbjct: 15 SDFTTWTAAELAEKIHSREISSVEVTQAHLDRISDVDGEINAFIHVSADEALAAAHNVDA 74 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I GD L G+P+ +KD F T T + S +L+G+ Y++T+T +L G +L Sbjct: 75 AIAAGDTPTSSLAGVPLALKDAFVTTDAPTTSGSKMLEGYMSPYDATLTLRLRSAGIPIL 134 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YGP +PW + TPGGS GGSSAA+A + +IGTD Sbjct: 135 GKTNMDEFAMGSSTENSAYGPTRNPWDL-----ERTPGGSGGGSSAALAAGMAPLAIGTD 189 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQ G RTV+D+A L + IAG+D Sbjct: 190 TGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQGGPAARTVKDTARLHQVIAGFD 249 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKD 294 + DAT + D A Q ++G+ VG+ K++ + + L + + ++ + LK Sbjct: 250 QNDATSSRHEIADVVAAAKQGANGDLKGVKVGVVKQFQQAEALQVGVRERYEANLEQLKS 309 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA+++E+ P+ +AL AYY+I +E SSNLAR+DG+RYGLR G D E+ + Sbjct: 310 QGAELIEVDCPNFDHALNAYYLIQFSEISSNLARFDGMRYGLRA-GDDGTRSADEVMSLS 368 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RIM+GTY LS YD++YL+A+++R L+ +D+ +AFEQ VD+I PTTP Sbjct: 369 RAEGFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRNLVAQDYAKAFEQ-VDIIAAPTTP 427 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFR 469 T+AF LG+ ++ M +++ D+FT+ +N+AG+ +S+P L + ++P GLQL+G Sbjct: 428 TTAFKLGELVDDPLQM-YLF-DLFTLPLNLAGVCGMSLPGGLSSDTQLPTGLQLMGPAHG 485 Query: 470 EETLFSVGQIIE 481 E+ ++ VG E Sbjct: 486 EDRIYRVGSAFE 497 >gi|291295884|ref|YP_003507282.1| glutamyl-tRNA(Gln) amidotransferase A subunit [Meiothermus ruber DSM 1279] gi|290470843|gb|ADD28262.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Meiothermus ruber DSM 1279] Length = 476 Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 206/476 (43%), Positives = 297/476 (62%), Gaps = 11/476 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E ++S +S E+V + +Q I +++A I + Q + AA ++R+ G Sbjct: 1 MLAHEIVKNIQSGQVSPQEVVSASLQRIAQLEPRLHALIRLNPQAEQEAAL-VEQRLARG 59 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+P+ +KD T+G+ T S +L F P Y +TV +KL GAV++ K NMDE Sbjct: 60 EPLPLAGVPVVLKDNICTQGLTTTCGSRMLADFVPPYSATVVEKLRQAGAVVVAKANMDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S +GP +PW T++ PGG+SGGS+AAVA + ++GTDTGGS+RQ Sbjct: 120 FAMGSSTEYSAFGPTRNPW----DTER-VPGGTSGGSAAAVAAGMVPLALGTDTGGSVRQ 174 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G G KPTYGR SR G+++ A SLDQ G + RTV+D A+L ++GYD D+T + Sbjct: 175 PAALCGVYGFKPTYGRISRYGVVATASSLDQVGTMARTVQDLALLSDVVSGYDPMDSTSL 234 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + P + AL S +G+T+G+ KE S + + ++ S ++ G + VE+SLP Sbjct: 235 EVQ-PQFAAALQASSRGLTIGLVKEALTVGNSAGVLEALERFRSVMEAQGVRFVEVSLPS 293 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +YAL AYYI++ AE SSNLARYDG YGLRV G D +R GFG EV+ RI++G Sbjct: 294 LEYALAAYYIVNTAEISSNLARYDGTLYGLRVPGDDSTTTMMQSREHGFGPEVQRRILMG 353 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+VLSS Y+++Y +A + R IK DF AF + D++LTPT+P AF LG++ + SM Sbjct: 354 TFVLSSGYYEAYYGKALRARARIKADFDRAFSEA-DLLLTPTSPFPAFRLGEKTTDPLSM 412 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TVAVN+AGLPA+S+PA E +P+GLQLIG+ +E +F+ E+ Sbjct: 413 --YLADIDTVAVNLAGLPAMSIPAGF-EGHLPVGLQLIGKALHDEQIFAAANAFEQ 465 >gi|149195256|ref|ZP_01872345.1| glutamyl-tRNA amidotransferase subunit A [Caminibacter mediatlanticus TB-2] gi|149134598|gb|EDM23085.1| glutamyl-tRNA amidotransferase subunit A [Caminibacter mediatlanticus TB-2] Length = 451 Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 183/410 (44%), Positives = 267/410 (65%), Gaps = 14/410 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +G+PI IKD KG S IL G++ Y +TV K+++NG G+ NMDEFAMGS Sbjct: 49 DGVPIAIKDNINVKGWEITCASKILKGYKAPYNATVIDKMFENGLSAYGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S ETS YG ++P PGGSSGGS+A V L A++G+DTGGSIRQPA+F Sbjct: 109 STETSQYGKTLNPHNP-----NRVPGGSSGGSAAVVGANLAIAALGSDTGGSIRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+++F+ SLDQ G IT+ V D+AIL IAGYD+ D+T + Sbjct: 164 GVVGMKPTYGRVSRYGLVAFSSSLDQIGPITQNVEDAAILYNIIAGYDKNDSTSARI--- 220 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 D+ + + + + Y +D I I L+ G I+ +L +++ + Sbjct: 221 DHTPVEINENRKLKIAVIDNY-IDEADNEIKNAILDVIKGLEKEGHTIIHKNLMNSKIDV 279 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+++ AEASSNLAR+DG+RYG R+EGKD+ E Y+ TR+ FG EVK RIM+GT+VLS Sbjct: 280 ATYYVVATAEASSNLARFDGMRYGNRIEGKDLKETYKLTRA-QFGDEVKRRIMLGTFVLS 338 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++Y++A+K+R +IK +F + F + DVI+TP TPT+AF G +++ + + Sbjct: 339 SGYYDAYYIKAQKVRHIIKNEFDKLFAEA-DVIITPVTPTTAFEFGSKKD---PLEMYLS 394 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 D++T++VN+AG+PAIS+P A ++ MP+G+Q+I + F E++LF +I+E Sbjct: 395 DIYTISVNLAGVPAISLPIAKDKESMPIGMQIIAKHFDEQSLFDAAKIVE 444 >gi|296119558|ref|ZP_06838116.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium ammoniagenes DSM 20306] gi|295967441|gb|EFG80708.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium ammoniagenes DSM 20306] Length = 494 Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 216/490 (44%), Positives = 311/490 (63%), Gaps = 22/490 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E +++ S+++++ E+V +++ I +N +N+++ V A++A A A+ D + Sbjct: 10 LTSLTAAELAEKIHSREVTSREVVQAHLDRIAETNDALNSFLHVGAEEALATADAVDAAL 69 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ A L G+P+ +KD T T A S +L+G+ Y++TVT KL + G +LGK Sbjct: 70 DAGEKPASALAGVPLALKDLLTTTDAPTTAASKMLEGWVSPYDATVTTKLREAGIPILGK 129 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSSNE S +GPV +P + TPGGS GG+SAA+A IGTDTG Sbjct: 130 TNLDEFAMGSSNENSAFGPVHNPHDL-----ERTPGGSGGGTSAALASGQAPLGIGTDTG 184 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG DE Sbjct: 185 GSIRQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPTARTVLDAALLHEVIAGLDEF 244 Query: 242 DATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT VN PV A + + G+ VG+ K++ D P + + ++ + L GA Sbjct: 245 DATSVNRPVAPVVAAAREGAKGDLTGVKVGLIKQFERDGWQPGVMEAYRAAVDQLVAQGA 304 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 + VE+ PH AL AYY+I P E SSNLAR+DG+RYG RV G D E+ TR+ Sbjct: 305 ETVEVDCPHFDDALAAYYLIMPCEVSSNLARFDGMRYGSRV-GDDGSHSADEVMSLTRAE 363 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LS YD++YL+A+++RTLI DF+ AFE+ VDV+++PTTPT+A Sbjct: 364 GFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLISEDFSRAFEK-VDVLVSPTTPTTA 422 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 F LG++ + M YN D+ T+ +N+AGL +SVP+ + + +P GLQ++ F ++ Sbjct: 423 FKLGEKTEDPMEM---YNFDLCTLPLNLAGLCGMSVPSGMASDSGLPTGLQIMAPAFEDD 479 Query: 472 TLFSVGQIIE 481 L+ VG E Sbjct: 480 RLYKVGAAYE 489 >gi|168186076|ref|ZP_02620711.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum C str. Eklund] gi|169295882|gb|EDS78015.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium botulinum C str. Eklund] Length = 485 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 206/462 (44%), Positives = 294/462 (63%), Gaps = 13/462 (2%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIH 88 YI E + ++ AY+ + + A A+ DK+I G+ + L G+P+GIKD + G+ Sbjct: 29 YIDRTEYIDEKIGAYLYLAKESALKEAKLLDKKIEKGELLKGLWGVPVGIKDNISVSGMQ 88 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 S IL+ + Y++TV +L +N ++LGKLNMDEFAMGSSNE S + V +PW Sbjct: 89 NTCASKILENYISPYDATVISRLKENNGIILGKLNMDEFAMGSSNENSAFKVVKNPWDL- 147 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 + PGGSSGGS+AAVA S+GT+TGGS+RQPA+ G VG KPTYGR SR G+ Sbjct: 148 ----ERIPGGSSGGSAAAVASREIPLSLGTETGGSVRQPAALCGVVGFKPTYGRISRYGV 203 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 SFA +LDQ G I + V D AIL + I+G+D+ D+T V YE+ L + + G+ +G+ Sbjct: 204 TSFASTLDQVGTIGKDVTDCAILTEIISGFDKKDSTSSRKIVQSYEKNLHKDLTGIKIGV 263 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 P+E+ + L + K + I L++ GAKI SLP ++Y+L AYYIIS AEASSNL R Sbjct: 264 PEEFFKENLDDGVRKQIEDAIKILEENGAKIKTCSLPLSEYSLSAYYIISSAEASSNLGR 323 Query: 329 YDGVRYGLRVE--GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 DG+RYG R++ GKD ++Y +RS GFG+EVK RIM+GTYVLS Y+ +Y +A K+R Sbjct: 324 MDGIRYGRRIDTVGKD-EDIYIKSRSEGFGEEVKRRIMLGTYVLSKGYYEEYYEKALKVR 382 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 +LIK DF ++ VD I+TPT+ +AF + +N+ SM +D +TV ++ GLPAI Sbjct: 383 SLIKEDFKRVLKE-VDAIITPTSQVTAFKFRERKNDVLSMYS--SDAYTVPASIVGLPAI 439 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 S+ K +P+G QLIG FRE+ LF++G E+ + + Sbjct: 440 SISCGFS-KGLPVGFQLIGDYFREDLLFNIGYSYEQSTDFHK 480 >gi|270159583|ref|ZP_06188239.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Legionella longbeachae D-4968] gi|289165623|ref|YP_003455761.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella longbeachae NSW150] gi|269987922|gb|EEZ94177.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Legionella longbeachae D-4968] gi|288858796|emb|CBJ12708.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella longbeachae NSW150] Length = 480 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 202/484 (41%), Positives = 309/484 (63%), Gaps = 11/484 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F+++ + LR + S+VEL Y+ I S +NA+I + + A AA+++D+ + Sbjct: 1 MEFLSIKQCGHALRQGEFSSVELTKHYLAQIAK-QSDLNAFISIDEEYALLAAQKADQEL 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G + L GIP+ +KD F T + T S +L FR YE+T+ KL ++G++++GK N Sbjct: 60 KKGQGKVLTGIPMALKDLFCTTTMTTTCASKMLADFRAPYEATLVSKLLEHGSILVGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE SY+G V +PW + PGGSSGGS+AAVA L +IG+DTGGS Sbjct: 120 MDEFAMGSANENSYFGVVKNPW-----DKERVPGGSSGGSAAAVAAGLVPFAIGSDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ G GIKPTYG SR G+I++A SLDQAG + R+ D A++L+A+AG+D D+ Sbjct: 175 IRQPAALCGISGIKPTYGLISRYGMIAYASSLDQAGPLARSAEDLALVLQAMAGHDPKDS 234 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T V +PDY L++ + + +G+P + + + + + ++ ++ GA+I+++ Sbjct: 235 TSVASAIPDYYEELNKPLTKLKIGLPSCFFQPQVEQEVQQAIRTAVNVFEEMGAEIIDLD 294 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEVKHR 362 L +P YY+I+ AEASSNL+RYDG+R+G + + ++ NTRS GFG EVK R Sbjct: 295 LQLQPLWVPCYYVIACAEASSNLSRYDGLRFGYCSDKATSLTDLIRNTRSEGFGIEVKRR 354 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+ GT+VLSS +D++YL+A+KIR LI+ + ++ VD+IL PT+PT AF +G E Sbjct: 355 ILTGTHVLSSGYFDAYYLQAQKIRRLIQEELITTLKK-VDIILGPTSPTCAFKIG--EKI 411 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + + DVFTVA N+AGLPAIS+PA + +P+GLQL+G F E L + ++ Sbjct: 412 ADPIQNYLADVFTVAANLAGLPAISIPAGF-SQGLPIGLQLMGTHFSEHRLLQLAHHYQQ 470 Query: 483 EAGY 486 + + Sbjct: 471 QTDW 474 >gi|325105976|ref|YP_004275630.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pedobacter saltans DSM 12145] gi|324974824|gb|ADY53808.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pedobacter saltans DSM 12145] Length = 493 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 203/459 (44%), Positives = 289/459 (62%), Gaps = 11/459 (2%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S ELV Y+ I+N S +NA++EV ++++ AE ++IING A L G+ IGIKD Sbjct: 40 LSLQELVAFYLSQIQNL-SDLNAFLEVFSEESIQKAEIIQEKIINGTAGKLAGMVIGIKD 98 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 + KG A S +L+ + Y +TV +L A+++G+LN DEFAMG+SNETSY+GP Sbjct: 99 NISYKGHKISAASKMLENYTAVYSATVVDRLLAEDAIIIGRLNCDEFAMGASNETSYFGP 158 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 V ++ + +K GGSSGGS+ AV +C AS+GTDTGGSIRQPA+F G +GIKPTY Sbjct: 159 V----KNFANRNK-VSGGSSGGSAVAVQANMCLASLGTDTGGSIRQPAAFCGVIGIKPTY 213 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 R SR G+I++A S DQ G ITR+V D+A+LL+ +AG DE D VP+Y R ++ Sbjct: 214 SRVSRYGVIAYASSFDQVGPITRSVEDAALLLEVLAGRDENDNISSGKAVPEYSR-FSKN 272 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 I + + L P I + + I LK G + +S + Y + AYYI++ A Sbjct: 273 TPKKIAYIEETLNSEGLDPEIKRNIEGQIEKLKVLGHIVEPVSFKYLDYVVAAYYILTTA 332 Query: 321 EASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 E+SSNL+RYDGV +G R E D+ Y+ +RS GFG+EVK RIM+GT+VLS+ YD++Y Sbjct: 333 ESSSNLSRYDGVHFGYRSEKATDLESTYKLSRSEGFGEEVKRRIMLGTFVLSAGYYDAYY 392 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 RA+K+R LIK E + D +LTPTTP AF +G ++ + + D+FTV + Sbjct: 393 ARAQKVRRLIKEKMEEILDN-YDFVLTPTTPGPAFDIGAKKTD--PLEAYLADIFTVIAS 449 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + GLPAISVP E+ +P+G+Q IG+ F E+ L S + Sbjct: 450 LTGLPAISVPCGTTEEGLPIGIQFIGKSFEEDKLLSFSK 488 >gi|118498251|ref|YP_899301.1| Glu-tRNAGln amidotransferase A subunit [Francisella tularensis subsp. novicida U112] gi|194324435|ref|ZP_03058208.1| amidase, putative [Francisella tularensis subsp. novicida FTE] gi|166217670|sp|A0Q8I2|GATA_FRATN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118424157|gb|ABK90547.1| Glu-tRNAGln amidotransferase A subunit [Francisella novicida U112] gi|194321500|gb|EDX18985.1| amidase, putative [Francisella tularensis subsp. novicida FTE] Length = 481 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 207/466 (44%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFAHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KENHFTQDLEKDISGKVIGVDESLIKD-LPEQIQEAVLKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VDVI P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDVIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|119963344|ref|YP_947223.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arthrobacter aurescens TC1] gi|189045140|sp|A1R4R1|GATA_ARTAT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|119950203|gb|ABM09114.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Arthrobacter aurescens TC1] Length = 522 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 216/491 (43%), Positives = 315/491 (64%), Gaps = 19/491 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + ++ +L S++++AVE+ +++ I + + Q+NA++ V +++A A A E D Sbjct: 6 NELIRHSAADLAAKLASREVTAVEVTQAHLDRIADVDGQVNAFLHVNSEEALAVAAEVDA 65 Query: 62 RIING-----DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 G + L G+PI +KD T G T A S IL+G+ Y++TV +KL Sbjct: 66 ARAAGGSAAEELHALAGVPIAVKDLIVTIGQPTTAGSKILEGWHSPYDATVVKKLRAAKM 125 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +LGK N+DEFAMGSS E S YGP +PW D+ PGGS GGS+AAVA F ++ Sbjct: 126 PILGKTNLDEFAMGSSTEHSAYGPTRNPW----DLDRI-PGGSGGGSAAAVAAFEAPLAL 180 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTDTGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I Sbjct: 181 GTDTGGSIRQPGAVTGTVGVKPTYGAVSRYGAIAMASSLDQIGPVSRTVLDSALLQEVIG 240 Query: 237 GYDECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 G+D D+T + P D A ++ GM +GI KE + ++ + + + LKDA Sbjct: 241 GHDPFDSTSLTDPFNDLVAAARVGNVAGMKIGIVKELHGEGYQAGVENRFNESLQLLKDA 300 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+S P+ +YAL AYY+I P+E SSNLA++DGVR+G+RV KD I + TR Sbjct: 301 GAEIVEVSCPNLKYALGAYYLIMPSEVSSNLAKFDGVRFGMRVLPKDGPMTIERVMGATR 360 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AF + DV+++PT PT Sbjct: 361 AAGFGDEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFDAAFAK-ADVLISPTAPT 419 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF LG++ ++ +M NDV T+ N+AG+P +S+P L E +P+G+QL+ ++ Sbjct: 420 TAFKLGEKLDDPLAM--YLNDVATIPANLAGIPGLSLPGGLADEDGLPVGIQLLAPARQD 477 Query: 471 ETLFSVGQIIE 481 L+ VG ++E Sbjct: 478 ARLYRVGAVLE 488 >gi|332678987|gb|AEE88116.1| Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella cf. novicida Fx1] Length = 481 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 206/466 (44%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFAHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + +++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDIEKDISGKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VDVI P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDVIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|158287623|ref|XP_309611.3| AGAP004057-PA [Anopheles gambiae str. PEST] gi|157019511|gb|EAA05381.3| AGAP004057-PA [Anopheles gambiae str. PEST] Length = 492 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 201/478 (42%), Positives = 288/478 (60%), Gaps = 12/478 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES-DKRIINGDARDLEGI 74 RSK + V +V+ + IE S+ +NA++ V ++KA A++S D+ N L+G+ Sbjct: 15 FRSKSLDPVAVVEHSLAQIE-SHKHLNAFVRVSSEKALEQAKQSKDRHDANSPKSILDGV 73 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD F TKGIHT S +L F P Y++TV ++L +GAV++GK N+D+F MGS Sbjct: 74 TIAVKDNFCTKGIHTTCASRMLQNFIPTYDATVVERLQAHGAVIVGKTNLDQFGMGSGCI 133 Query: 135 TSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 S +GP + W + D+F GGSSGGS+ AVA LC A++G+DTGGS R PAS+ G Sbjct: 134 DSIFGPTRNNWSEDTNDDRFRIAGGSSGGSAVAVAAGLCYAALGSDTGGSTRNPASYCGI 193 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---V 250 VG+KPTYG SR G+I S+D GI+TRTV D A +L A+AG D D+T V P + Sbjct: 194 VGLKPTYGLVSRHGLIPLVNSMDVPGIMTRTVDDCASMLNAVAGPDVYDSTTVKRPFESI 253 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 E+ + S++G+ +GIP EY D L + +TW L+ AGA + +SLP+T + Sbjct: 254 APLEKQM--SLKGVRIGIPIEYHCDGLEKEVLETWTVIADMLESAGATVKAVSLPNTASS 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + Y I++ E +SN++RYDG+ YG R E ++Y TR+ GF VK+RI+ G Y Sbjct: 312 IFVYSILNQCEVASNMSRYDGIEYGHRSQEDSSTEQLYARTRAEGFNGVVKNRILSGNYF 371 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L YD ++ +A K+R LI DF AF++ VDV+LTPTT + A PL K+ S + Sbjct: 372 LLRENYDKYFQKALKVRRLIADDFVRAFKE-VDVLLTPTTLSEA-PLYKDFVQSNNRDQC 429 Query: 430 -YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D T NMAG+PAIS+P L +++P+ LQL+G F E L V IEK+ + Sbjct: 430 AVQDFCTQPANMAGIPAISIPIRLSSRQLPISLQLMGDHFTERNLLQVANWIEKQVDF 487 >gi|145224825|ref|YP_001135503.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium gilvum PYR-GCK] gi|315445155|ref|YP_004078034.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium sp. Spyr1] gi|189045254|sp|A4TE06|GATA_MYCGI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|145217311|gb|ABP46715.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium gilvum PYR-GCK] gi|315263458|gb|ADU00200.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium sp. Spyr1] Length = 494 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 211/497 (42%), Positives = 312/497 (62%), Gaps = 21/497 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + + D++ SK++S+ E+ +++ I ++ +A++ V A++A AAA+ D Sbjct: 1 MSELIKLDAATLADKISSKEVSSAEVTQAFLDQIAATDGDYHAFLHVGAEQALAAAQTVD 60 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + G+ L G+P+ +KD F T + T S +L+G+ Y++TVT KL G + Sbjct: 61 RAVAAGEHLPSPLAGVPLALKDVFTTTDMPTTCGSKVLEGWTSPYDATVTAKLRSAGIPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YGP +PW + + PGGS GGS+AA+A F +IGT Sbjct: 121 LGKTNMDEFAMGSSTENSAYGPTRNPWDT-----ERVPGGSGGGSAAALAAFQAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+ Sbjct: 176 DTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGH 235 Query: 239 DECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLK 293 D D+T V PVPD A + G+ +G+ K+ R + + ++ + L Sbjct: 236 DPLDSTSVEAPVPDVVAAARTGAGGDLTGVRIGVVKQLRSGEGYQAGVLASFNAAVDQLT 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYEN 349 GA++ E+ PH Y+LPAYY+I P+E SSNLA++DG+RYGLR G D E+ Sbjct: 296 ALGAEVTEVDCPHFDYSLPAYYLILPSEVSSNLAKFDGMRYGLRA-GDDGTHSAEEVMAL 354 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR+ GFG EVK RIMIG Y LS+ YD++Y +A+K+RTLI RD A+ Q VDV+++P T Sbjct: 355 TRAAGFGPEVKRRIMIGAYALSAGYYDAYYNQAQKVRTLIARDLDAAY-QKVDVLVSPAT 413 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPF 468 PT+AF LG++ ++ SM +++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ Sbjct: 414 PTTAFRLGEKVDDPLSM-YLF-DLCTLPLNLAGHCGMSVPSGLSADDNLPVGLQIMAPAL 471 Query: 469 REETLFSVGQIIEKEAG 485 ++ L+ VG E G Sbjct: 472 ADDRLYRVGAAYEAARG 488 >gi|227488030|ref|ZP_03918346.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glucuronolyticum ATCC 51867] gi|227091892|gb|EEI27204.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glucuronolyticum ATCC 51867] Length = 498 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 215/490 (43%), Positives = 310/490 (63%), Gaps = 22/490 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ SE +++ S+++S+VE +++ I + ++ A++ V A +A AAA DK + Sbjct: 15 LTSLSASELAEKIHSREVSSVEATQAHLDRIAEVDEELGAFLHVGADEALAAARAVDKSL 74 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ A L G+P+ +KD F T T S +L+G+ Y++TV K+ G +LGK Sbjct: 75 DKGEKPASPLAGVPLALKDVFVTTDAPTTCASKMLEGYMSPYDATVVTKIRGAGIPILGK 134 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S Y +PW D T TPGGS GG++AA+A IGTDTG Sbjct: 135 TNMDEFAMGSSTENSAYHVTKNPW---DRTR--TPGGSGGGTAAALASGEAPIGIGTDTG 189 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ TGTVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG D Sbjct: 190 GSIRQPAALTGTVGVKPTYGGVSRYGLVACASSLDQGGPCARTVLDTALLHEVIAGVDTH 249 Query: 242 DATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT V+ PVPD A + + G+ VG+ K++ + P + + +QQ I L+ GA Sbjct: 250 DATTVDTPVPDVVGAAREGAKGDLSGVKVGVVKQFVREGYQPGVLENFQQSIEKLRGLGA 309 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 IVE+ PH A+ YY+I +E SSNLAR+DG+RYGLR EG D E+ +R+ Sbjct: 310 DIVEVDCPHFDDAIGTYYLIQFSEISSNLARFDGMRYGLR-EGDDGKHSAAEVMSISRAA 368 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI+ GTY LS YD++YL+A+++R LI +DF +A+EQ +V++ P TPT+A Sbjct: 369 GFGPEVKRRILAGTYTLSVGYYDAYYLKAQRVRALIAQDFAKAYEQ-AEVLVAPVTPTTA 427 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 F LG++ N+ +M YN D+FT+ +N+AGL +SVPA L + +P+GLQ++ F+++ Sbjct: 428 FALGEKVNDPLAM---YNFDLFTLPLNLAGLGGMSVPAGLASDTNLPVGLQIMAPAFKDD 484 Query: 472 TLFSVGQIIE 481 L+ VG E Sbjct: 485 RLYKVGAAFE 494 >gi|208780278|ref|ZP_03247620.1| amidase, putative [Francisella novicida FTG] gi|208743927|gb|EDZ90229.1| amidase, putative [Francisella novicida FTG] Length = 481 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 207/466 (44%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KENHFTQDLEKDISGKVIGVDESLIKD-LPEQIQEAVLKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VDVI P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDVIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|281412933|ref|YP_003347012.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotoga naphthophila RKU-10] gi|281374036|gb|ADA67598.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotoga naphthophila RKU-10] Length = 472 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 200/473 (42%), Positives = 301/473 (63%), Gaps = 23/473 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L+ D L ++AI+ + + A+I V K + E++ K G Sbjct: 10 DSLKLPDEERENLPRLSLEAIKKFDPHVKAFISV---KEDVSVEKNGK---------FWG 57 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPI IKD T G+ T S IL+ + +++TV +KL + G V++GK N+DEFAMGSS Sbjct: 58 IPIAIKDNILTLGMRTTCASKILENYESVFDATVVKKLKEAGFVIVGKANLDEFAMGSST 117 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S + P +PW + PGGSSGGS+AAVA + A++G+DTGGS+RQPAS G Sbjct: 118 ERSAFFPTRNPWDL-----ERVPGGSSGGSAAAVASGMVVAALGSDTGGSVRQPASLCGV 172 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KPTYG SR G+++FA SLDQ G IT+TVRD+AIL++ I+G DE DAT ++ V D+ Sbjct: 173 VGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGKDENDATTMDRKV-DF 231 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ + GM +P+E + + + +++ + L+ GAK+ ++S+PH +Y++ Sbjct: 232 LSEIENGVAGMRFAVPQEIYEHKIEDGVAERFEESLKLLEKLGAKVEKVSIPHMKYSVAV 291 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YY+I+PAEASSNLAR+DGV+YGLRV+ K + EMY TR++GFG+EV+ RIMIGT+ LS+ Sbjct: 292 YYVIAPAEASSNLARFDGVKYGLRVKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAA 351 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 Y++++ +A K+R I + E Q D ILTPT+P +AF +G+ ++ + + D+ Sbjct: 352 YYEAYFNKAMKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIKD---PLTYYLMDI 407 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT+ N+AGLPAISVP +P+G+Q+IG+ F + +F + + IEK + Y Sbjct: 408 FTIPANLAGLPAISVPFGFS-NNLPVGVQVIGRRFADGKVFRIARAIEKNSPY 459 >gi|148272588|ref|YP_001222149.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830518|emb|CAN01453.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 515 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 208/490 (42%), Positives = 319/490 (65%), Gaps = 20/490 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ ++ DRL S+++S+V+ V +++ I++ + ++A++ V ++A A E D + Sbjct: 4 DLTRLSAADLADRLASREVSSVDAVRAHLDRIDHVDGDVHAFLHVSGERALGRAAEIDAQ 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +G L G+PI IKD T + + A S +L+G+ P Y++TV Q+L G V LGK Sbjct: 64 RADGAPLGPLAGVPIAIKDVLCTIDMPSTAGSRMLEGWTPPYDATVVQRLRAAGLVPLGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S +G +PW D+ PGGS GGS+AAVA F ++G+DTG Sbjct: 124 TNMDEFAMGSSTEHSAFGATHNPW----DLDRI-PGGSGGGSAAAVAAFEAPVALGSDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ TG+VG+KPTYG SR G I+ A SLDQ G ++RTV DSA++ I G+D Sbjct: 179 GSIRQPAAVTGSVGVKPTYGGVSRYGAIALASSLDQVGPVSRTVLDSALVHDVIGGHDPR 238 Query: 242 DATCVNLPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T + P + A + S++G+ +G+ K+ + + + +++ + L+ AG Sbjct: 239 DSTSLTDAWPSFAEAARAGQREGSVKGLRIGVVKQLDGEGFQAGVTQRFREALDLLEQAG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSI 353 A+IVE+S P+ ++A+ AYY+I PAEASSNLA++D VR+GLRV G + ++ TR Sbjct: 299 AEIVEVSAPNFEHAIAAYYLILPAEASSNLAKFDSVRFGLRVNPPGGGTVEDVMAATREA 358 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AF+Q VDV++TP+ PT+A Sbjct: 359 GFGPEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFDAAFQQ-VDVLVTPSAPTTA 417 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F LG++ ++ +M ND+ T+ N+AG+P I +P L E +P+G+Q + P RE+ Sbjct: 418 FKLGEKLDDPLAM--YLNDLTTIPANLAGVPGIGLPIGLAPEDGLPVGIQFMA-PAREDA 474 Query: 473 -LFSVGQIIE 481 L++VG +E Sbjct: 475 RLYTVGAALE 484 >gi|254375059|ref|ZP_04990539.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella novicida GA99-3548] gi|151572777|gb|EDN38431.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella novicida GA99-3548] Length = 481 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 206/466 (44%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEYSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + +++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDIEKDISGKVIGVDESLIKD-LPEQIQQAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VDVI P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDVIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|83815816|ref|YP_444809.1| amidase, putative [Salinibacter ruber DSM 13855] gi|109891984|sp|Q2S4S2|GATA_SALRD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|83757210|gb|ABC45323.1| Amidase, putative [Salinibacter ruber DSM 13855] Length = 514 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 213/520 (40%), Positives = 309/520 (59%), Gaps = 51/520 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +++R L + + S LV S+++ I+ ++++NA+ V A A D + Sbjct: 1 MEYPTFTDARRALDAGETSCEALVSSFLERIDARDNEINAFTSVDQDGALNHARYLDSQR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ R L G+ + +KD +G S +L F Y++TV +L D GA+ +GK N Sbjct: 61 ERGNPRPLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLYDATVIDRLRDAGAIFIGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 DEFAMGSSNETS++GPV +P ++ PGGSSGGS+AAVA LC A++G+DTGGS Sbjct: 121 CDEFAMGSSNETSHFGPVRNPH-----APEYVPGGSSGGSAAAVAAGLCHAALGSDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQPA+F GTVG+KPTYGR SR G+++FA SLD G +TR+ D+A +L IAG DE D+ Sbjct: 176 VRQPAAFCGTVGLKPTYGRVSRSGLVAFASSLDVIGPLTRSAEDAATILNVIAGEDERDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + VPDY L ++G+ +G+P+EY + L I + + + L DAGA + E+S Sbjct: 236 TSAPVDVPDYTEGLGDGVEGLRLGLPEEYFAEGLDDDIRRMVTEQVDRLDDAGATVEEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK---------------------- 341 LPHT+Y + YY+++ AEASSNLARYDG+RYG R + + Sbjct: 296 LPHTEYGVATYYLVATAEASSNLARYDGIRYGHRADLQETKQALQERREELKEELASARA 355 Query: 342 -------DILE------------MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 D LE +Y +R+ GFG EVK RIM+GTY LS+ YD +Y +A Sbjct: 356 QGDEARADTLEAQLDDEQSTLDALYTRSRTEGFGDEVKRRIMLGTYALSAGYYDKYYEKA 415 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 +++RTLI+ DF AFE VD ++TPTTPT F LG++ ++ M ND++TV N+AG Sbjct: 416 QRVRTLIRHDFERAFED-VDALITPTTPTPPFRLGEKTDDPLEM--YLNDIYTVTANLAG 472 Query: 443 LPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQII 480 LP ++VP +P+GLQ++G F E L +G I Sbjct: 473 LPGLTVPIGEHPDTPGLPVGLQVLGPHFDEALLLRIGAAI 512 >gi|294506662|ref|YP_003570720.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Salinibacter ruber M8] gi|294342990|emb|CBH23768.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Salinibacter ruber M8] Length = 514 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 213/520 (40%), Positives = 308/520 (59%), Gaps = 51/520 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +++R L + + S LV S+++ I+ + ++NA+ V A A D + Sbjct: 1 MEYPTFTDARRALDAGETSCEALVSSFLERIDARDDEINAFTSVDQDGALNHARYLDSQR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ R L G+ + +KD +G S +L F Y++TV +L D GA+ +GK N Sbjct: 61 ERGNPRPLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLYDATVIDRLRDAGAIFIGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 DEFAMGSSNETS++GPV +P ++ PGGSSGGS+AAVA LC A++G+DTGGS Sbjct: 121 CDEFAMGSSNETSHFGPVRNPH-----APEYVPGGSSGGSAAAVAAGLCHAALGSDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQPA+F GTVG+KPTYGR SR G+++FA SLD G +TR+ D+A +L IAG DE D+ Sbjct: 176 VRQPAAFCGTVGLKPTYGRVSRSGLVAFASSLDVIGPLTRSAEDAATILNVIAGEDERDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T + VPDY L ++G+ +G+P+EY + L I + + + L DAGA + E+S Sbjct: 236 TSAPVDVPDYTEGLGDGVEGLRLGLPEEYFAEGLDDDIRRMVTEQVDRLDDAGATVEEVS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK---------------------- 341 LPHT+Y + YY+++ AEASSNLARYDG+RYG R + + Sbjct: 296 LPHTEYGVATYYLVATAEASSNLARYDGIRYGHRADLQETKQALQERREELKEELASARA 355 Query: 342 -------DILE------------MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 D LE +Y +R+ GFG EVK RIM+GTY LS+ YD +Y +A Sbjct: 356 QGDEARVDTLEAQLDDEQSTLDALYTRSRTEGFGDEVKRRIMLGTYALSAGYYDKYYEKA 415 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 +++RTLI+ DF AFE VD ++TPTTPT F LG++ ++ M ND++TV N+AG Sbjct: 416 QRVRTLIRHDFERAFED-VDALITPTTPTPPFRLGEKTDDPLEM--YLNDIYTVTANLAG 472 Query: 443 LPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQII 480 LP ++VP +P+GLQ++G F E L +G I Sbjct: 473 LPGLTVPIGEHPDTPGLPVGLQVLGPHFDEALLLRIGAAI 512 >gi|297559145|ref|YP_003678119.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843593|gb|ADH65613.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 499 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 219/491 (44%), Positives = 306/491 (62%), Gaps = 20/491 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + +E + +R +++ E +Y+ IE+ + ++NA++ V + A A D Sbjct: 1 MSDVISLTAAELGEAIREGRVTSEEATTAYLDRIESVDGEINAFLHVRRETALEQARAVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+P+ KD F TK + T A S IL+G++P Y++TVT +L + G V+L Sbjct: 61 ARRAAGEELGPLAGVPVAHKDVFTTKDMPTTAASKILEGWQPPYDATVTARLREAGLVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S Y +PW TD+ PGGSSGGSSAAVA F + GTD Sbjct: 121 GKTNMDEFAMGSSTENSAYKVTRNPW----DTDRI-PGGSSGGSSAAVAAFEAPLATGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G VG KPTYG SR G+I+FA SLD G R V D+A+L +A +G+D Sbjct: 176 TGGSIRQPAAVCGLVGAKPTYGGSSRYGMIAFASSLDTPGPFARNVLDAALLHEAFSGHD 235 Query: 240 ECDATCVNLPVP---DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T ++ PVP D R D ++G+ VG+ E D P + + + + + L+ G Sbjct: 236 PRDSTSIDAPVPPVVDAARLGD--VEGLRVGVVSELDSDGFQPGVRQRFHETLELLESLG 293 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRS 352 AKIVE+S P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR+ Sbjct: 294 AKIVELSCPSFDAALSAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSAEEVMSLTRA 352 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIM+GTY LSS YD++Y A+++RTLIKRDF AFE VDV+++PTTPT+ Sbjct: 353 QGFGPEVKRRIMLGTYALSSGYYDAYYGSAQQVRTLIKRDFDAAFEN-VDVLVSPTTPTT 411 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 AFP+G E M D+ T+ N+AG ++SVP L E +P+G Q++ P ++ Sbjct: 412 AFPIG--ERAEDPMAMYLADLCTIPSNLAGNASLSVPCGLAPEDGLPVGFQIMAPPLADD 469 Query: 472 TLFSVGQIIEK 482 + V +E+ Sbjct: 470 RTYRVAAAVER 480 >gi|110598888|ref|ZP_01387139.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlorobium ferrooxidans DSM 13031] gi|110339501|gb|EAT58025.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlorobium ferrooxidans DSM 13031] Length = 474 Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 204/472 (43%), Positives = 297/472 (62%), Gaps = 12/472 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDL 71 R RL S+ IS E++ Y+ I+ ++ N YI V Q+A A+ D++++ G + L Sbjct: 10 RSRLLSRAISCEEVIRLYLDRIDQHHAD-NIYITVFHQQALDRAKALDRKLVEGGNPGKL 68 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+PI IKD A KG S IL+ + Y++T +L + AV LGK NMDEFAMGS Sbjct: 69 FGMPIAIKDNIAIKGAGLTCASKILENYESVYDATAVLRLEEADAVFLGKTNMDEFAMGS 128 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 SNE S +G V +P+ D T PGGSSGGS+AAVA L ++G+DTGGS+RQPA F Sbjct: 129 SNENSAFGNVPNPF---DKTR--VPGGSSGGSAAAVANGLAMVALGSDTGGSVRQPAGFC 183 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG+KPTYGR SR G+++FA S DQ G++ D+A++L+ +AG DE DAT VP Sbjct: 184 NIVGLKPTYGRISRYGLVAFASSFDQIGVLAMNCDDAALVLEVMAGKDEHDATSSLHAVP 243 Query: 252 DYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 DY + S++G+ +G+P E+ + L+P + + + + L+D GA++V+I+LP + YA Sbjct: 244 DYRAGMAAVSVEGLRIGVPSEFFHESLNPDVARLVKGKLHELRDRGAELVDITLPESDYA 303 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + AYYI+ AEASSNLAR+DG RYG R +D+ MY N+R+ FG+EVK RIM+GTYV Sbjct: 304 IAAYYILVTAEASSNLARFDGARYGYRSGSAEDLAAMYVNSRTEAFGREVKRRIMLGTYV 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ YD++Y +A+++R + + + EA E+ VDVI PT+P F +G + + M Sbjct: 364 LSAGYYDTYYKKAQQVRRVFQDRYREALEK-VDVIAGPTSPFPPFGIGDKTGDPLEM--Y 420 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 DVFTV ++ G+PA+SVP +P+GL LI F E L + + ++ Sbjct: 421 LADVFTVPASIVGMPAVSVPVGFDSLNLPVGLHLICNFFEEGKLLGIARHMQ 472 >gi|134301237|ref|YP_001121205.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. tularensis WY96-3418] gi|166217671|sp|A4IVY3|GATA_FRATW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|134049014|gb|ABO46085.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 481 Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 206/466 (44%), Positives = 285/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEYSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDLEKDISGKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VD I P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDAIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|300870771|ref|YP_003785642.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brachyspira pilosicoli 95/1000] gi|300688470|gb|ADK31141.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brachyspira pilosicoli 95/1000] Length = 482 Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 193/479 (40%), Positives = 300/479 (62%), Gaps = 12/479 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEES 59 +LN +++ + R++L++K+I AV L +S I+ IE + ++ AY+E+ +A A+++ Sbjct: 2 DLNELSIIQIREKLKNKEIDAVSLTESIIKKIEEDDKREDKIYAYLEIFKDEAIEQAKKA 61 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +RI G+ L G+P+ IKD K A S +L+G++ Y + Q+L DNGA+++ Sbjct: 62 QERINKGEDLPLLGVPLAIKDNLCYKDHLMTASSKMLEGYKAPYTAPTVQRLIDNGAIII 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ NMDEFAMG + ETS YG +P PGGSSGGS+AAV+ ++G+D Sbjct: 122 GRTNMDEFAMGGTTETSNYGITRNPVNR-----AHVPGGSSGGSAAAVSANFAFGALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYGR RLG ++ A SLDQ G + + V+D+A++ K IAG+D Sbjct: 177 TGGSIRQPASFCGIVGVKPTYGRVPRLGCVAMASSLDQVGPLAKDVKDAALMTKIIAGFD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAK 298 ++T +N+PVPDY LD +++GM +G+ KE Y D L+ + + + I LK GA+ Sbjct: 237 PKESTTLNIPVPDYNSLLDGNVKGMKIGLAKEYYETDLLNNEVRENVMKAIDNLKAQGAE 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 IV+ISLP+ +Y Y + E +SN+ RYDG+RYG +G ++ E Y +RS G Sbjct: 297 IVDISLPNAKYGSRVYTAVMAVEVASNMGRYDGIRYGYHPKGDFNLDEYYYASRSAGLAF 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E + RI+ GT + + + SHY A K+R L++ DF AF + VD+I++PT+P +A LG Sbjct: 357 ETRARILFGTLMTGKKFFYSHYQHALKVRKLMQMDFDNAF-KNVDIIISPTSPITAGLLG 415 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + ++G + D + +N+ GLPA+SVP + + MP+G+Q I + F E ++F + Sbjct: 416 TRDQTDSALGFL-ADSYASNINLVGLPAMSVPCGVDKNNMPIGIQFIAKQFDEASMFKM 473 >gi|269957178|ref|YP_003326967.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Xylanimonas cellulosilytica DSM 15894] gi|269305859|gb|ACZ31409.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Xylanimonas cellulosilytica DSM 15894] Length = 516 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 216/495 (43%), Positives = 315/495 (63%), Gaps = 22/495 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ ++ ++ RL + +I++VE +++ I + Q+NA++ V A++A A + D Sbjct: 1 MSDVTRLSAAQLAGRLAAGEITSVEATAAHLDRIAEVDGQVNAFLHVSAEEALTTAHDVD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+PI +KD TKG+ T A S IL+G+ P Y++T+ +++ G +L Sbjct: 61 ARRAAGEELHPLAGVPIAVKDVVVTKGLPTTAGSKILEGWIPPYDATLVERIKAAGLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +G +PW D+ PGGS GGS+AAVA + +IGTD Sbjct: 121 GKTNMDEFAMGSSTEHSAFGDTHNPW----DLDRI-PGGSGGGSAAAVAAYEAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G+I+ A SLDQAG +TRTV DSA+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGSVSRYGLIAMASSLDQAGPVTRTVLDSALLHELIGGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + +P + A Q + G+ VG+ E + + P + + + + L+ A Sbjct: 236 PRDSTSIPEALPSFVDAARQGATGDLTGVRVGVVTELQGEGYQPGVLARFHESLELLEKA 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA++VE+S PH YAL AYY+I PAEASSNLA++DG+R+GLRVE + + TR Sbjct: 296 GAELVEVSCPHFPYALDAYYLIMPAEASSNLAKFDGMRFGLRVEPTEGPLTAERVMAATR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AF Q DV+++PT PT Sbjct: 356 GQGFGDEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFAAAFAQ-ADVLVSPTAPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-----KKMPLGLQLIGQ 466 +AF LG++ ++ +M NDV T+ N+AG+P ISVP L E +P+G Q++ Sbjct: 415 TAFKLGEKLDDPLAM--YLNDVATIPANLAGVPGISVPNGLAEPADGGAPLPVGFQILAP 472 Query: 467 PFREETLFSVGQIIE 481 ++ L+ VG +E Sbjct: 473 AKADDRLYRVGAALE 487 >gi|305681760|ref|ZP_07404564.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium matruchotii ATCC 14266] gi|305658233|gb|EFM47736.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium matruchotii ATCC 14266] Length = 497 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 208/493 (42%), Positives = 315/493 (63%), Gaps = 24/493 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL M ++ ++ ++++S+ E+ +++ I + + ++A++ V A +A AAA + D+ Sbjct: 13 SELTSMTAADLAQKIHARELSSEEVTQAHLDRIADIDGDIHAFLHVGADEALAAARQVDE 72 Query: 62 RIING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ +G A L G+P+ +KD F T T S IL+G+ Y++TVT+++ + G +L Sbjct: 73 QLDSGARPASPLAGVPLALKDLFTTTDAPTTCGSKILEGYMSPYDATVTKRIREAGIPIL 132 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N DEFAMGSS E S YGP +PW ++ T + GGSS ++ A +IGTD Sbjct: 133 GKTNTDEFAMGSSTENSAYGPTHNPW-DLERTAGGSGGGSSAALASGEAPL----AIGTD 187 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG D Sbjct: 188 TGGSIRQPAALTSTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVFDTALLHEVIAGPD 247 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKD 294 DAT V+ PV A + + G+ VG+ K++ D Y S +D+ + + + L+ Sbjct: 248 PYDATSVDRPVAPVVAAAREGARGDLTGVRVGVVKQFDRDGYQSGVLDQ-FHKAVDHLQS 306 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA +VE+ PH AL AYY+I P E SSNLAR+DG+RYGLRV G D E+ T Sbjct: 307 LGATVVEVDCPHFDDALAAYYLILPCEVSSNLARFDGMRYGLRV-GDDGTHSAAEVMALT 365 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RI++GTY LS YD++Y++A+++RTLI +DF++A+EQ DV+++PTTP Sbjct: 366 RAAGFGPEVKRRIILGTYALSVGYYDAYYVQAQRVRTLIAQDFSKAYEQ-CDVLVSPTTP 424 Query: 411 TSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPF 468 T+AF LG + ++ +M YN D+ T+ +N+AGL +S+PA L + +P+GLQ++ F Sbjct: 425 TTAFKLGDKVSDPLAM---YNFDLCTLPLNLAGLCGMSLPAGLADDTHLPVGLQIMAPAF 481 Query: 469 REETLFSVGQIIE 481 ++ L+ VG E Sbjct: 482 ADDRLYKVGAAFE 494 >gi|311740576|ref|ZP_07714403.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium pseudogenitalium ATCC 33035] gi|311304096|gb|EFQ80172.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium pseudogenitalium ATCC 33035] Length = 495 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 212/490 (43%), Positives = 317/490 (64%), Gaps = 22/490 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E +++ S++I++ E+ +++ I +N ++N+++ V A++A AAA+ DK + Sbjct: 11 LTSLTAAELAEKIHSREITSREVTQAFLDRIAETNEELNSFLHVGAEEALAAADAVDKAL 70 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ A L G+P+ +KD T T A S +L+G+ Y++TVT++L + G +LGK Sbjct: 71 DAGEEPASGLAGVPLALKDLLVTTDAPTTAASKMLEGYVSPYDATVTKRLREAGIPILGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSSNE S +GP +P+ + + TPGGS GG++AA+A IGTDTG Sbjct: 131 TNLDEFAMGSSNENSAFGPAHNPYDT-----ERTPGGSGGGTAAALASGQAPLGIGTDTG 185 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG+D Sbjct: 186 GSIRQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPCGRTVLDTALLHEVIAGHDAF 245 Query: 242 DATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT V+ PV A + + G+ VG+ K++ D + + + + L++ GA Sbjct: 246 DATSVDKPVAPVVAAAREGANGDLSGVKVGLIKQFERDGWQEGVMENYHAAVEQLREQGA 305 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 +I+E+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D ++ +R+ Sbjct: 306 EIIEVDCPHFDDALAAYYLIMPCEVSSNLARFDGMRYGLRA-GDDGSHSAEQVMSQSRAE 364 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LS YD++YL+A+++RTLI +DF AFEQ VDV+++PTTPT+A Sbjct: 365 GFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLIAQDFARAFEQ-VDVLVSPTTPTTA 423 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 F LG++ + +M YN D+ T+ +N+AGL +SVP+ L + +P GLQ++ F ++ Sbjct: 424 FKLGEKAEDPMAM---YNFDLCTLPLNLAGLCGMSVPSGLASDTNLPTGLQIMAPAFEDD 480 Query: 472 TLFSVGQIIE 481 L+ VG E Sbjct: 481 RLYKVGAAYE 490 >gi|56707200|ref|YP_169096.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. tularensis SCHU S4] gi|110669670|ref|YP_666227.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. tularensis FSC198] gi|224456261|ref|ZP_03664734.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. tularensis MA00-2987] gi|254371416|ref|ZP_04987417.1| glu-tRNAGln amidotransferase A subunit [Francisella tularensis subsp. tularensis FSC033] gi|254874040|ref|ZP_05246750.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. tularensis MA00-2987] gi|81598119|sp|Q5NIP6|GATA_FRATT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|123359664|sp|Q14K49|GATA_FRAT1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|54114009|gb|AAV29638.1| NT02FT1725 [synthetic construct] gi|56603692|emb|CAG44653.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. tularensis SCHU S4] gi|110320003|emb|CAL08036.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. tularensis FSC198] gi|151569655|gb|EDN35309.1| glu-tRNAGln amidotransferase A subunit [Francisella tularensis subsp. tularensis FSC033] gi|254840039|gb|EET18475.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. tularensis MA00-2987] gi|282158308|gb|ADA77699.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. tularensis NE061598] Length = 481 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 205/466 (43%), Positives = 286/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEYSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAG++ D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGVLGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDLEKDISGKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VD I P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDAIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|217968691|ref|YP_002353925.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thauera sp. MZ1T] gi|217506018|gb|ACK53029.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thauera sp. MZ1T] Length = 490 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 214/473 (45%), Positives = 299/473 (63%), Gaps = 14/473 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E R L ++ ISAVEL ++ I+ N +NA+I V + A AAA +D RI G Sbjct: 5 SLPELRRALDARQISAVELAGLFLDRIDALNPALNAFITVDREGALAAARAADARIAAGS 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L GIP+ KD F T+G+ T S +L F Y++ V L GAV LGK NMDEF Sbjct: 65 AGPLTGIPLAHKDVFCTEGVLTTCGSKMLANFVSPYDAHVVSLLEAAGAVSLGKANMDEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE+SY+G V +PW PGGSSGGS+AAVA L + GTDTGGS+RQP Sbjct: 125 AMGSSNESSYFGAVKNPWNL-----GRIPGGSSGGSAAAVAARLAPIATGTDTGGSVRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G GIKPTYG SR G+I++A SLDQ G + D A+LL A+ G+D D+T + Sbjct: 180 AAYCGITGIKPTYGLVSRYGMIAYASSLDQGGAFGASAEDCALLLGAMTGFDARDSTSLE 239 Query: 248 LPVPDY-----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P DY A + ++G+ +G+P+E+ + +S + + + + GA VE+ Sbjct: 240 RPTEDYAAALAGPACARPLEGLRIGLPREFFAEGMSDDVRAAVEAAVEQYRVLGATTVEV 299 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 SLP+ + A+PAYY+I+PAE SSNL+R+DGVRYG R + D+ +MY +R+ GFG EVK Sbjct: 300 SLPNAKLAIPAYYVIAPAECSSNLSRFDGVRYGHRAADYGDLADMYAKSRAEGFGAEVKR 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTYVLS YD++YL+A+++R LI +DF A Q D+I PTTPT+A+ LG++ + Sbjct: 360 RILVGTYVLSHGYYDAYYLQAQRLRRLIAQDFQAAL-QHCDLIAGPTTPTTAWTLGEKAD 418 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + M +D++T+AVN+AGLP +S P +P+GLQLIG F E L Sbjct: 419 DPVQM--YLSDIYTIAVNLAGLPGLSHPVGFGADGLPVGLQLIGDYFAESRLL 469 >gi|238916393|ref|YP_002929910.1| amidase [Eubacterium eligens ATCC 27750] gi|259647214|sp|C4Z3J4|GATA_EUBE2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|238871753|gb|ACR71463.1| amidase [Eubacterium eligens ATCC 27750] Length = 481 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 212/490 (43%), Positives = 306/490 (62%), Gaps = 11/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L++ AV E ++++ + +A E +++ I IE S ++N Y+ +KA AAA+++D Sbjct: 1 MSLLDYTAV-ELAAKIKAGETTATEAMEAVIAQIEKSEDELNCYVTFDKEKALAAAKKAD 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I G L G+P IKD T+G+ T S IL F P Y + ++L + GAV++ Sbjct: 60 EDIKAGKLTGPLAGVPFAIKDNMCTEGMLTTCSSKILGNFVPTYTADAVERLQNAGAVII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +G +P + PGGSSGGS+AAVA C A++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGATKNPRNP-----EHVPGGSSGGSAAAVAANECFAALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS+ G VG+KPTYG SR G+I++ SLDQ G + + V D A +++AIAG D Sbjct: 175 TGGSIRQPASYCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPLCKDVTDCATIMEAIAGKD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D+T + + AL ++GM +GIP++Y + L P + + L+ GA + Sbjct: 235 DKDSTSIGRDDYSFTNALVDDVKGMKIGIPRDYFGEGLDPEVKEAVLNAAKVLESKGAIV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E L +YA+P YY I+ AEASSNL R+DGV+YG R E + + MY+ TRS GFG E Sbjct: 295 EEFDLSLVEYAIPTYYTIAAAEASSNLERFDGVKYGYRTKEYEGLHNMYKKTRSEGFGPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+G++VLSS YD++YL+A +++ LIK+ F EAF + DVIL P PT+A LG Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRVKALIKKAFDEAFAK-YDVILGPVAPTTAPKLGS 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ M D++T++VN+AGLP +SVP + +P+GLQLIG F+E + G Sbjct: 414 SLSDPIKM--YLGDIYTISVNLAGLPGLSVPCGKDKNGLPIGLQLIGDCFKENNIIRAGY 471 Query: 479 IIEKEAGYFR 488 E+ G F Sbjct: 472 AYEQARGRFE 481 >gi|262203132|ref|YP_003274340.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gordonia bronchialis DSM 43247] gi|262086479|gb|ACY22447.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Gordonia bronchialis DSM 43247] Length = 495 Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 215/494 (43%), Positives = 321/494 (64%), Gaps = 19/494 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +++ ++ +E ++ ++++S+VE+ +++ I + Q+ A++ V +A AA+ +D Sbjct: 8 NDITGLSAAELAGKIAARELSSVEVTQAHLDRIAEIDDQLGAFLHVSGAEALVAAKAADD 67 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+A L G+PI +KD F T T S IL+G+ P Y++ VT++L G +LG Sbjct: 68 AIAAGEAPSALAGVPIALKDVFTTVDAPTTCGSKILEGWVPPYDAAVTERLRAAGIPILG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW + PGGS GGS+AA+A + +IGTDT Sbjct: 128 KTNMDEFAMGSSTENSAYQVTRNPWDT-----SRVPGGSGGGSAAALASYQAPLAIGTDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 183 GGSIRQPAAVTATVGVKPTYGTVSRYGLVACASSLDQGGPCGRTVLDTALLHEVIAGHDA 242 Query: 241 CDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T ++ PVPD A +Q + G+ +G+ E + + P + ++++ + L D G Sbjct: 243 RDSTSIDTPVPDVVAAARAGAEQDLTGVRIGVVTELQGEGYQPGVLESFRNAVQVLTDRG 302 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRS 352 A+++E+S PH YAL AYY+I P+E SSNLAR+D +RYGLRV G D E+ TR Sbjct: 303 AEVIEVSCPHFTYALGAYYLILPSEVSSNLARFDAMRYGLRV-GDDGHHSAEEVMAMTRD 361 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTY LSS YD++Y +A+K+RTLI RDFT AFE+ VDV+++PTTPT+ Sbjct: 362 QGFGPEVKRRIMIGTYALSSGYYDAYYGQAQKVRTLISRDFTAAFEK-VDVLVSPTTPTT 420 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 AFPLG++ ++ +M +++ D+ T+ VN+AG+ A+SVP+ L + P+GLQ++ ++ Sbjct: 421 AFPLGEKVDDPLAM-YLF-DLCTLPVNLAGIGAMSVPSGLSADDGQPVGLQIMAPALADD 478 Query: 472 TLFSVGQIIEKEAG 485 L+ +G E G Sbjct: 479 RLYRIGASYEAARG 492 >gi|15644028|ref|NP_229077.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermotoga maritima MSB8] gi|7387699|sp|Q9X0Z9|GATA_THEMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|307776355|pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State. gi|4981829|gb|AAD36347.1|AE001782_8 glutamyl tRNA-Gln amidotransferase, subunit A [Thermotoga maritima MSB8] Length = 475 Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 185/414 (44%), Positives = 278/414 (67%), Gaps = 11/414 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+ IKD T G+ T S IL+ + +++TV +K+ + G V++GK N+DEFAMGSS Sbjct: 60 GIPVAIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSS 119 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + P +PW + PGGSSGGS+AAV+ + A++G+DTGGS+RQPAS G Sbjct: 120 TERSAFFPTRNPWDL-----ERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCG 174 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPTYG SR G+++FA SLDQ G IT+TVRD+AIL++ I+G DE DAT VN V D Sbjct: 175 VVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDENDATTVNRKV-D 233 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + +++ + GM +P+E + + + +++ + L+ GAK+ + +PH +Y++ Sbjct: 234 FLSEIEEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVA 293 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+PAEASSNLAR+DGV+YGLR++ K + EMY TR++GFG+EV+ RIMIGT+ LS+ Sbjct: 294 TYYVIAPAEASSNLARFDGVKYGLRIKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSA 353 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 Y++++ +A K+R I + E Q D ILTPT+P +AF +G+ ++ + + D Sbjct: 354 AYYEAYFNKAMKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIKD---PLTYYLMD 409 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +FT+ N+AGLPAISVP +P+G+Q+IG+ F + +F + + IEK + Y Sbjct: 410 IFTIPANLAGLPAISVPFGFS-NNLPVGVQVIGRRFADGKVFRIARAIEKNSPY 462 >gi|170289328|ref|YP_001739566.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotoga sp. RQ2] gi|170176831|gb|ACB09883.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotoga sp. RQ2] Length = 472 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 199/473 (42%), Positives = 301/473 (63%), Gaps = 23/473 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L+ D L ++AI+ + + A+I V K + E++ K G Sbjct: 10 DSLKLPDEERENLPRLSLEAIKKFDPHVKAFISV---KEDVSVEKNGK---------FWG 57 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPI IKD T G+ T S IL+ + +++TV +KL + G V++GK N+DEFAMGSS Sbjct: 58 IPIAIKDNILTLGMKTTCASKILENYESVFDATVVKKLKEAGFVIVGKANLDEFAMGSST 117 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S + P +PW + PGGSSGGS+AAVA + A++G+DTGGS+RQPAS G Sbjct: 118 ERSAFFPTRNPWDL-----ERVPGGSSGGSAAAVASGMVVAALGSDTGGSVRQPASLCGV 172 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KPTYG SR G+++FA SLDQ G IT+TV+D+AIL++ I+G DE DAT ++ V D+ Sbjct: 173 VGYKPTYGLVSRYGLVAFASSLDQIGPITKTVKDAAILMEIISGKDENDATTMDRKV-DF 231 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ + GM +P+E + + + +++ + L+ GAK+ ++S+PH +Y++ Sbjct: 232 LSEIENGVAGMRFAVPQEIYEHKIEDGVAERFEESLKLLEKLGAKVEKVSIPHMKYSVAV 291 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YY+I+PAEASSNLAR+DGV+YGLRV+ K + EMY TR++GFG+EV+ RIMIGT+ LS+ Sbjct: 292 YYVIAPAEASSNLARFDGVKYGLRVKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAA 351 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 Y++++ +A K+R I + E Q D ILTPT+P +AF +G+ ++ + + D+ Sbjct: 352 YYEAYFNKAMKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIKD---PLTYYLMDI 407 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT+ N+AGLPAISVP +P+G+Q+IG+ F + +F + + IEK + Y Sbjct: 408 FTIPANLAGLPAISVPFGFS-NNLPVGVQVIGRRFADGKVFRIARAIEKNSPY 459 >gi|255324555|ref|ZP_05365672.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium tuberculostearicum SK141] gi|255298461|gb|EET77761.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium tuberculostearicum SK141] Length = 495 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 213/490 (43%), Positives = 315/490 (64%), Gaps = 22/490 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E +++ S++I++ E+ +++ I +N ++N+++ V A++A AAA+ DK + Sbjct: 11 LTSLTAAELAEKIHSREITSREVTQAFLDRIAETNEELNSFLHVGAEEALAAADAVDKAL 70 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G A L G+P+ +KD T T A S +L+G+ Y++TVT++L + G +LGK Sbjct: 71 DAGQEPASGLAGVPLALKDLLVTTDAPTTAASKMLEGYVSPYDATVTKRLREAGIPILGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSSNE S +GP +P+ + + TPGGS GG++AA+A IGTDTG Sbjct: 131 TNLDEFAMGSSNENSAFGPAHNPYDT-----ERTPGGSGGGTAAALASGQAPLGIGTDTG 185 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L + IAG+D Sbjct: 186 GSIRQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPCGRTVLDTALLHEVIAGHDAF 245 Query: 242 DATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT V+ PV A + + G+ VG+ K++ D + + + + L++ GA Sbjct: 246 DATSVDKPVAPVVAAAREGAKGDLSGVKVGLIKQFERDGWQEGVMENYHAAVDQLREQGA 305 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D ++ +R+ Sbjct: 306 DIVEVDCPHFDDALAAYYLIMPCEVSSNLARFDGMRYGLRA-GDDGSHSAEQVMSQSRAE 364 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RIM+GTY LS YD++YL+A+++RTLI +DF AFEQ VDV+++PTTPT+A Sbjct: 365 GFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLIAQDFARAFEQ-VDVLVSPTTPTTA 423 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 F LG++ + +M YN D+ T+ +N+AGL +SVP+ L + +P GLQ++ F ++ Sbjct: 424 FKLGEKAEDPMAM---YNFDLCTLPLNLAGLCGMSVPSGLASDTNLPTGLQIMAPAFEDD 480 Query: 472 TLFSVGQIIE 481 L+ VG E Sbjct: 481 RLYKVGAAYE 490 >gi|225022718|ref|ZP_03711910.1| hypothetical protein CORMATOL_02763 [Corynebacterium matruchotii ATCC 33806] gi|224944626|gb|EEG25835.1| hypothetical protein CORMATOL_02763 [Corynebacterium matruchotii ATCC 33806] Length = 497 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 205/492 (41%), Positives = 311/492 (63%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL M ++ ++ ++++S+ E+ +++ I + + ++A++ V A +A AAA + D+ Sbjct: 13 SELTSMTAADLAQKIHARELSSEEVTQAHLDRIADIDGDIHAFLHVGADEALAAARQVDE 72 Query: 62 RIING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ +G A L G+P+ +KD F T T S IL+G+ Y++TVT+++ + G +L Sbjct: 73 QLDSGARPASPLAGVPLALKDLFTTTDAPTTCGSKILEGYMSPYDATVTKRIREAGIPIL 132 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N DEFAMGSS E S YGP +PW ++ T + GGSS ++ A +IGTD Sbjct: 133 GKTNTDEFAMGSSTENSAYGPTHNPW-DLERTAGGSGGGSSAALASGEAPL----AIGTD 187 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG D Sbjct: 188 TGGSIRQPAALTSTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGPD 247 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT V+ PV A + + G+ VG+ K++ D + + + + L+ Sbjct: 248 PYDATSVDRPVAPVVAAAREGARGDLTGVRVGVVKQFDRDGYQNGVLDQFHKAVDHLQSL 307 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA +VE+ PH AL AYY+I P E SSNLAR+DG+RYGLRV G D E+ TR Sbjct: 308 GATVVEVDCPHFDDALAAYYLILPCEVSSNLARFDGMRYGLRV-GDDGTHSAAEVMALTR 366 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++Y++A+++RTLI +DF++A+EQ DV+++PTTPT Sbjct: 367 AAGFGPEVKRRIILGTYALSVGYYDAYYVQAQRVRTLIAQDFSKAYEQ-CDVLVSPTTPT 425 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFR 469 +AF LG + ++ +M YN D+ T+ +N+AGL +S+PA L + +P+GLQ++ F Sbjct: 426 TAFKLGDKVSDPLAM---YNFDLCTLPLNLAGLCGMSLPAGLADDTHLPVGLQIMAPAFA 482 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 483 DDRLYKVGAAFE 494 >gi|326916127|ref|XP_003204362.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog, partial [Meleagris gallopavo] Length = 482 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 193/460 (41%), Positives = 275/460 (59%), Gaps = 23/460 (5%) Query: 47 VVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 V + A AEES+KR G +L+GIPI +KD F T GI T S++L G+ Y + Sbjct: 1 VAEETALKQAEESEKRYRRGQPLGELDGIPIAVKDNFNTAGIETTCASNMLKGYISPYNA 60 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR-SMDSTDKFTPGGSSGGSS 164 TV QKL D GAV+LGK N+DEFAMGS + +GPV +PW S +K P S + Sbjct: 61 TVVQKLLDGGAVLLGKTNLDEFAMGSGSTDGVFGPVRNPWSYSRQYKEKIVPRSDSEPEN 120 Query: 165 A--------------AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 + AV+ F C A++G+DTGGS R PA+ G VG+KPTYG SR G+I Sbjct: 121 SNWVITGGSSGGSAAAVSAFTCFAALGSDTGGSTRNPAAHCGVVGLKPTYGLISRHGLIP 180 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 S+D GI+TR V D+A++L ++AG+D D+T V + + +++GIPK Sbjct: 181 LVNSMDVPGILTRCVDDAAVVLGSLAGHDPKDSTTVQDIFQPFALPSLTDVSKLSIGIPK 240 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 EY LS I W + K+AGAK+VE+SLPHT Y++ Y+++ AE +SN+AR+D Sbjct: 241 EYHAPGLSSEILAVWSKAADLFKNAGAKVVEVSLPHTHYSIVCYHVLCTAEVASNMARFD 300 Query: 331 GVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 G+ YG R + K MY TR GF V+ RI+ G Y L + Y+ ++++A+K+R LI Sbjct: 301 GLEYGHRSDMNKSTESMYAATRREGFSDVVRGRILSGNYFLLKQNYEDYFVKAQKVRRLI 360 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 DF + F GVD++LTPTT + A P KE+N + S +D+ T A NMAGLPA+ Sbjct: 361 ANDFVKVFGSGVDILLTPTTLSDAVPYVEFIKEDNRTRST---QDDILTQAANMAGLPAV 417 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +VP AL + +P+GLQ IG+ F+E+ L +V + EK+ + Sbjct: 418 NVPTALSGRGLPIGLQFIGRSFQEKQLLTVAKWFEKQVQF 457 >gi|327261679|ref|XP_003215656.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Anolis carolinensis] Length = 524 Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 200/499 (40%), Positives = 290/499 (58%), Gaps = 24/499 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E L+ +S EL + I+ + +NAYI V + A AE S+KR G Sbjct: 5 SIREISAALKEGQVSPTELCQKCLSLIKATRF-LNAYITVAEETALKQAEASEKRYKKGQ 63 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L+GIP+ +KD F+T GI T S +L G+ P + +TV QKL GA++LGK N+DE Sbjct: 64 SLGPLDGIPVAVKDNFSTAGIETTCASLMLKGYVPPFNATVVQKLLAQGAILLGKTNLDE 123 Query: 127 FAMGSSNETSYYGPVISPW--------RSMDSTDKFTPGGS-------SGGSSAAVAGFL 171 FAMGS + +GPV +PW + + + G+ SGGS+AAV+ F Sbjct: 124 FAMGSGSTDGAFGPVRNPWSYSRQYKEKCLQNPKTQNEDGNWLITGGSSGGSAAAVSSFT 183 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 C A++G+DTGGS R PAS G VG+KPTYG SR G+I S+D GI+TR V D+A + Sbjct: 184 CFAALGSDTGGSTRNPASLCGVVGLKPTYGLVSRHGLIPLVNSMDVPGILTRCVDDAATI 243 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L + G+D D+T V P ++ ++ + +GIPKEY LS W + Sbjct: 244 LGVLGGHDLKDSTTVQDPFQPFQLPSLTELKNLCIGIPKEYNAPGLSRETLALWSKAADL 303 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENT 350 + AGA +VE+SLPHT Y++ Y+++ AE +SN+AR+DG+ YG R K +Y T Sbjct: 304 FEKAGANVVEVSLPHTSYSIVCYHVLCAAEVASNMARFDGLEYGHRSSVDKSTEALYAAT 363 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GF V+ RI+ G Y L + Y+ ++L+A+K+R LI DF F GVD++LTPTT Sbjct: 364 RREGFNDVVRGRILSGNYFLLKQNYEKYFLKAQKVRRLIATDFANVFSSGVDILLTPTTL 423 Query: 411 TSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 P KE+N + S +D+FT A NMAGLPA+SVP+AL E+ +P+GLQ IG+ Sbjct: 424 NHTVPYREFIKEDNRTRST---QDDIFTQAANMAGLPAVSVPSALSEEGLPIGLQFIGRA 480 Query: 468 FREETLFSVGQIIEKEAGY 486 F+E L +V + +E + + Sbjct: 481 FQEAQLLTVAKWLENQVQF 499 >gi|227542671|ref|ZP_03972720.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glucuronolyticum ATCC 51866] gi|227181554|gb|EEI62526.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium glucuronolyticum ATCC 51866] Length = 498 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 213/490 (43%), Positives = 310/490 (63%), Gaps = 22/490 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ SE +++ S+++S+VE +++ I + ++ A++ V A +A AAA D+ + Sbjct: 15 LTSLSASELAEKIHSREVSSVEATQAHLDRIAEVDEELGAFLHVGADEALAAARAVDESL 74 Query: 64 INGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ A L G+P+ +KD F T T S +L+G+ Y++TV K+ G +LGK Sbjct: 75 DKGEKPASPLAGVPLALKDVFVTTDAPTTCASKMLEGYMSPYDATVVTKIRGAGIPILGK 134 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S Y +PW D T TPGGS GG++AA+A IGTDTG Sbjct: 135 TNMDEFAMGSSTENSAYHVTKNPW---DRTR--TPGGSGGGTAAALASGEAPIGIGTDTG 189 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ TGTVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG D Sbjct: 190 GSIRQPAALTGTVGVKPTYGGVSRYGLVACASSLDQGGPCARTVLDTALLHEVIAGVDPH 249 Query: 242 DATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 DAT V+ PVPD A + + G+ VG+ K++ + P + + +QQ + L+ GA Sbjct: 250 DATTVDTPVPDVVGAAREGAKGDLSGVKVGVVKQFVREGYQPGVLENFQQSMEKLRGLGA 309 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSI 353 IVE+ PH A+ YY+I +E SSNLAR+DG+RYGLR EG D E+ +R+ Sbjct: 310 DIVEVDCPHFDDAIGTYYLIQFSEISSNLARFDGMRYGLR-EGDDGKHSAAEVMSISRAA 368 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI+ GTY LS YD++YL+A+++R LI +DF +A+EQ +V++ P TPT+A Sbjct: 369 GFGPEVKRRILAGTYTLSVGYYDAYYLKAQRVRALIAQDFAKAYEQ-AEVLVAPVTPTTA 427 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 F LG++ N+ +M YN D+FT+ +N+AGL +SVPA L + +P+GLQ++ F+++ Sbjct: 428 FALGEKVNDPLAM---YNFDLFTLPLNLAGLGGMSVPAGLASDTNLPVGLQIMAPAFKDD 484 Query: 472 TLFSVGQIIE 481 L+ VG E Sbjct: 485 RLYKVGAAFE 494 >gi|254373592|ref|ZP_04989078.1| glu-tRNAGln amidotransferase A subunit [Francisella tularensis subsp. novicida GA99-3549] gi|151571316|gb|EDN36970.1| glu-tRNAGln amidotransferase A subunit [Francisella novicida GA99-3549] Length = 481 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 205/466 (43%), Positives = 285/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S + SAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGETSAVELTKQYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + +++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDIEKDISGKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VDVI P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDVIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|296134657|ref|YP_003641899.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thiomonas intermedia K12] gi|295794779|gb|ADG29569.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thiomonas intermedia K12] Length = 504 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 218/491 (44%), Positives = 307/491 (62%), Gaps = 28/491 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L ++ +S+ EL + + I +++ + A++ V A+ A AA+ +D GD R L G+P Sbjct: 20 LAARQVSSAELTRAALDRIA-AHADLGAFLHVDAEGALQAAQAADAARAAGDTRPLLGVP 78 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-----GAVMLGKLNMDEFAMG 130 + KD F T+ + A S +L G+ ++++V +L + G V +GK NMDEFAMG Sbjct: 79 LAHKDVFVTRTLPATAGSRMLAGYVSPFDASVVARLGADDFAGAGMVTVGKTNMDEFAMG 138 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+NE S YGPV +PW PGGSSGGS+AAVA L A+ GTDTGGSIRQPA+ Sbjct: 139 SANENSAYGPVRNPWDL-----AAIPGGSSGGSAAAVAARLVPAATGTDTGGSIRQPAAM 193 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G GIKPTYG CSR G+I+FA SLDQAG + +T D A LL A+ G+D DAT V V Sbjct: 194 CGITGIKPTYGLCSRYGMIAFASSLDQAGPMAQTAWDCAALLTAMTGFDPRDATSVQRAV 253 Query: 251 PDYERALD---------QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 PDY ALD Q ++G+ +G+P+EY L+ ++ + + ++ GA +V+ Sbjct: 254 PDYVAALDQPLPGATAAQPLKGLRIGLPREYFGAGLAADVEAAVRTALKTIESLGATLVD 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVK 360 +SLP T+ ++PAYYII+PAEASSNL+R+DGVR+G R + KD+ EMY +R+ GFG EVK Sbjct: 314 VSLPLTELSIPAYYIIAPAEASSNLSRFDGVRFGHRTAQYKDLAEMYGKSRAEGFGPEVK 373 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIG YVLS YD++YL+A+KIR LI DF AF Q DVI P +PT A+ G + Sbjct: 374 RRIMIGAYVLSHGYYDAYYLQAQKIRRLIADDFVRAFTQ-CDVIAGPVSPTVAWNRGDKA 432 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLFSVG 477 + + + D++T++ ++AGLP +SVPA + P+GLQLIG F EE L V Sbjct: 433 D---PLANYLADIYTLSASLAGLPGMSVPAGFGTGANARRPVGLQLIGPHFAEERLLQVA 489 Query: 478 QIIEKEAGYFR 488 ++ + + R Sbjct: 490 HQFQQASHWHR 500 >gi|119717658|ref|YP_924623.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nocardioides sp. JS614] gi|119538319|gb|ABL82936.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nocardioides sp. JS614] Length = 506 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 210/473 (44%), Positives = 298/473 (63%), Gaps = 19/473 (4%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGI 78 + ++ E+ +++ I + ++A++ V A+ A A A ESD R G L+G+PI + Sbjct: 19 ETTSAEVTRTHLDRIAAVDGAVHAFLHVDAEGALAQAAESDARRAAGTPLSPLDGVPIAV 78 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD AT+G+ T S IL+G+ P Y++T +L G +LGK NMDEFAMGSS E S Y Sbjct: 79 KDVLATEGLPTTCGSKILEGWIPPYDATAVARLRAAGLPILGKTNMDEFAMGSSTEHSAY 138 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW D+ PGGS GGS+AAVA F ++GTDTGGSIRQP + TGTVG+KP Sbjct: 139 GPTHNPW----DLDRI-PGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVTGTVGVKP 193 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA-- 256 TYG SR G+++ A SLDQ G +TRTV DSA+L + I G+D D+T ++ P+P A Sbjct: 194 TYGGVSRYGLVALANSLDQVGPVTRTVLDSALLHEVIGGHDPRDSTSIDQPLPSLVEAAR 253 Query: 257 --LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + G+ VG+ E D P + +Q+ + L AGA++VE+S P +AL Y Sbjct: 254 LGATGDLSGLRVGVITELAGDGWQPGVMARFQESVDLLVKAGAEVVEVSCPTFVHALATY 313 Query: 315 YIISPAEASSNLARYDGVRYGLRV--EGK---DILEMYENTRSIGFGQEVKHRIMIGTYV 369 Y+I PAEASSNLA++D +RYGLRV EG+ E+ TR GFG EVK RI++GTY Sbjct: 314 YLILPAEASSNLAKFDAMRYGLRVWPEGRPDASAEEVMRATRDAGFGPEVKRRIILGTYA 373 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD++Y +A+K+RTLI RDF AF + DV+++PT PT+AF LG++ ++ +M Sbjct: 374 LSSGYYDAYYGQAQKVRTLISRDFDAAFAK-ADVLVSPTAPTTAFKLGEKLDDPLAM--Y 430 Query: 430 YNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 ND+ T+ N+AG+P ISVP+ L E +P G Q++ ++ + VG +E Sbjct: 431 LNDLATIPANLAGVPGISVPSGLADEDGLPAGFQILAPALADDRCYRVGAALE 483 >gi|269976750|ref|ZP_06183726.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus mulieris 28-1] gi|307700320|ref|ZP_07637360.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus mulieris FB024-16] gi|269935115|gb|EEZ91673.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus mulieris 28-1] gi|307614531|gb|EFN93760.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus mulieris FB024-16] Length = 513 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 211/493 (42%), Positives = 306/493 (62%), Gaps = 19/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E ++LR+ + ++ ELV +++ I+N + ++A++ V A A + D Sbjct: 3 SELYLQSATELAEKLRAGETTSEELVKIFLERIKNLDGTIHAFLFVDEAGALETARQVDA 62 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G+PI IKD T+G T S IL+G+ P Y++TV KL + G +LG Sbjct: 63 DRAAGKELPPYAGVPIAIKDNLVTRGKPTTCGSKILEGWLPPYDATVVLKLREAGLPVLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YG +PW + PGGS GGS+AAVA +L ++G+DT Sbjct: 123 KTNMDEFAMGSSTEHSAYGLTRNPWDL-----ERIPGGSGGGSAAAVAAYLAPWALGSDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG KPTYG SR G+++ A SLDQ G +TR V D+A L IAG+D Sbjct: 178 GGSIRQPGAVTGTVGAKPTYGAVSRYGLVAMASSLDQIGPVTRCVSDAAALHTIIAGHDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQG-----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT ++ PVPD A+ + + + VG+ K+ + + + + + + L+ A Sbjct: 238 LDATSLDEPVPDLSAAVTEVVANPNTTKLRVGVVKQISGEGFQAGVRQRFDEAVERLRAA 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTR 351 GA IVE+ P +Y+L AYY+I PAE SSNLAR+DGVRYGLRV G E M TR Sbjct: 298 GASIVEVDCPSFEYSLAAYYLIMPAEVSSNLARFDGVRYGLRVLPESGPVTAETMMAATR 357 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GT+VLS+ +D++Y A+K+RTL++RD AFEQ DV+++PT PT Sbjct: 358 EAGFGPEVKRRIILGTHVLSAGYFDAYYGSAQKVRTLVQRDLAAAFEQ-CDVLISPTAPT 416 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF G + ++ M NDV T+ NMAG+PAISVP + E +P+G+Q++ + Sbjct: 417 TAFKFGDKLDD--PMAMYLNDVATIPANMAGIPAISVPGGVAPEDGLPVGIQILAPARGD 474 Query: 471 ETLFSVGQIIEKE 483 +T+++ ++E + Sbjct: 475 KTMYAAAALVEAQ 487 >gi|219670625|ref|YP_002461060.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfitobacterium hafniense DCB-2] gi|219540885|gb|ACL22624.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfitobacterium hafniense DCB-2] Length = 491 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 209/492 (42%), Positives = 308/492 (62%), Gaps = 13/492 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V + L K++S++EL +Y++ I + ++ A++ V ++A A A D++ Sbjct: 2 QLHTLTVHQLSQLLADKEVSSLELTQAYLERIRQKDHELQAFVTVTGEEALAQARLVDEQ 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L GIP+ ++D T G+ T S +L + P ++TV +L G+V++GK Sbjct: 62 RLGGEELSALAGIPMAVQDNICTAGVKTTCASRMLSHYIPPADATVMGRLKKAGSVLIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEF MGSS S +P+ + PGGS GG++AAVA A ++G+DTG Sbjct: 122 ANLDEFGMGSSTGHSACHDTRNPFDL-----RAVPGGSGGGAAAAVAAGEAAFALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 G IRQPA+F G +G+KPTYG R G+IS+A SLDQ G R ++D A++LK I G+D Sbjct: 177 GDIRQPAAFCGVIGLKPTYGYVPRTGLISYASSLDQIGPFARDLKDLALILKTICGHDAG 236 Query: 242 DATCVNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T L VPD+ +L I+G+ +G+PKEY +SP + Q+ I+ L++ GA+ Sbjct: 237 DSTSALLEVPDFRESLSNDSNDIKGLKIGLPKEYFAAGVSPGVAARLQEAITKLEELGAR 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 VE++LPHT+ A A+Y ++ AEASSNLARYDGVRYGLRVEG+D+ M+ TR GFG Sbjct: 297 CVEVTLPHTEVAAAAHYALACAEASSNLARYDGVRYGLRVEGEDVQNMFMKTRGQGFGSA 356 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK IM+GT+VLSS YD +Y +A K+RTL +DF +AFEQ VD +LTP T T+A K Sbjct: 357 VKRSIMLGTHVLSSAHYDDYYTQALKVRTLNSQDFAQAFEQ-VDCLLTPATLTTAPQ--K 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + +++ T+ N+AGLPA+S+P L E MP+GLQLIG+ F E+TL V Sbjct: 414 SDLAGEPLTLVHSHRCTLPANLAGLPALSLPYGLSE-GMPVGLQLIGRHFDEQTLLRVAY 472 Query: 479 IIEKEAGYFRPH 490 +E+ RP Sbjct: 473 TLEQNTDQTRPQ 484 >gi|187930979|ref|YP_001890963.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. mediasiatica FSC147] gi|229485881|sp|B2SEM6|GATA_FRATM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|187711888|gb|ACD30185.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 481 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 204/466 (43%), Positives = 285/466 (61%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEYSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D A++L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVALMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I G +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDLEKDISGKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +++++R ++ + F Q VD I P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKSQQLRKVMTDQINQIFTQ-VDAIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|254368955|ref|ZP_04984968.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. holarctica FSC022] gi|157121876|gb|EDO66046.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. holarctica FSC022] Length = 481 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 205/466 (43%), Positives = 284/466 (60%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSVITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEYSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDLEKDISSKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VD I P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDAIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|295394417|ref|ZP_06804641.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brevibacterium mcbrellneri ATCC 49030] gi|294972769|gb|EFG48620.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Brevibacterium mcbrellneri ATCC 49030] Length = 500 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 209/493 (42%), Positives = 311/493 (63%), Gaps = 19/493 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L +E LR+ D ++ E+ +++ IE+ +NA+I A A A A + D Sbjct: 1 MTDLTRKTATELAQSLRAGDFTSTEVTRAHLDRIESVEPTINAFITTTADAALATAADVD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR D G+PI +KD T+GI T A S +L+ + P Y++TV QK+ + G +L Sbjct: 61 RKRAAGEDLHPYAGVPIALKDLVVTQGIRTTAASKMLENWVPPYDATVYQKVQEAGLPLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMG++ E S +G +PW D+T GSSGG++A+VA F S+GTD Sbjct: 121 GKTNLDEFAMGATTEHSAFGNTTNPW---DTTRSPG--GSSGGAAASVAAFEAPLSVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G VG+KPTYG SR GII+ A SLDQ G + RTV D+A L + +AG+D Sbjct: 176 TGGSIRQPAAFNGLVGVKPTYGSVSRYGIIAMASSLDQVGPLARTVEDAAALHQILAGHD 235 Query: 240 ECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + VPD+ A + ++G +G+ ++ + + + + + + + A Sbjct: 236 RHDSTSLTDEVPDFTAAAHAGAQEGLKGKKLGVIRQLQGEGWDVGVIARFNEALELAQKA 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TR 351 GA+IVE+ +P YA+ AYY+I P+E SSNLARYDG+RYGLRVE + E TR Sbjct: 296 GAEIVEVDIPSIGYAVEAYYLIMPSEVSSNLARYDGMRYGLRVEPSEGPVTAETVMAATR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG+EVK RI++GTY LS+ YD++Y A+K+RTL++RDF AF++ VDV+++PT+PT Sbjct: 356 AAGFGKEVKRRILLGTYALSAGYYDAYYGSAQKVRTLVQRDFAAAFDK-VDVLVSPTSPT 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A P G E+++ M D+ T+ N+AG+P +S+P+ L + +P GLQL+ P RE+ Sbjct: 415 TALPFGV-EDDADPMALYMGDIATIPANLAGIPGMSLPSGLSD-GLPTGLQLLA-PARED 471 Query: 472 T-LFSVGQIIEKE 483 L++VG E E Sbjct: 472 ARLYTVGGAFEAE 484 >gi|220912120|ref|YP_002487429.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arthrobacter chlorophenolicus A6] gi|219858998|gb|ACL39340.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Arthrobacter chlorophenolicus A6] Length = 524 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 220/483 (45%), Positives = 312/483 (64%), Gaps = 24/483 (4%) Query: 14 DRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDK-----RIIN 65 ++LR+ +++AVE ++ I A++ +NA++ V A++A A A E D Sbjct: 21 EKLRAGEVTAVEATQAHLDRIAAVDGGERGVNAFLHVNAEEALAVAAEVDAIRAAGGAEA 80 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+PI +KD T G T A S IL+G+ Y++TV ++L +LGK N+D Sbjct: 81 EALHYLAGVPIAVKDLIVTVGQPTTAGSKILEGWHSPYDATVVERLRAAKMPILGKTNLD 140 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S YGP +PW D+ PGGS GGS+AAVA F ++GTDTGGSIR Sbjct: 141 EFAMGSSTEHSAYGPTRNPW----DLDRI-PGGSGGGSAAAVAAFEAPLALGTDTGGSIR 195 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QP + TGTVG+KPTYG SR G I+ A SLDQ G +TRTV DSA+L + I G+D D+T Sbjct: 196 QPGAVTGTVGVKPTYGSVSRYGAIAMASSLDQIGPVTRTVLDSALLHQVIGGHDPRDSTS 255 Query: 246 VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + P+ D A S+QG+ +GI KE + ++ + + + LK+AGA+IVE+S Sbjct: 256 LPEPLADLVAAAKTGSVQGLRIGIIKELHGEGYQAGVENRFNESLELLKEAGAEIVEVSC 315 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTRSIGFGQEVK 360 P+ QYAL AYY+I P+EASSNLA++DGVRYGLRV EG +E + TR+ GFG EVK Sbjct: 316 PNFQYALGAYYLIMPSEASSNLAKFDGVRYGLRVLPEEGPMTIERVMGATRAAGFGDEVK 375 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY LS+ YD++Y A+K+RTL++RDF AF + DV+++PT PT+AF LG++ Sbjct: 376 RRIILGTYALSAGYYDAYYGSAQKVRTLVQRDFDAAFAK-ADVLISPTAPTTAFRLGEKL 434 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET-LFSVGQ 478 ++ +M NDV T+ N+AG+P +S+P L E +P+G+QL+ P RE+ L+ VG Sbjct: 435 DDPLAM--YLNDVATIPANLAGVPGLSLPGGLADEDGLPVGIQLLA-PAREDARLYRVGA 491 Query: 479 IIE 481 ++E Sbjct: 492 VLE 494 >gi|89257102|ref|YP_514464.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica LVS] gi|115315458|ref|YP_764181.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica OSU18] gi|156503315|ref|YP_001429380.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009494|ref|ZP_02274425.1| amidase, putative [Francisella tularensis subsp. holarctica FSC200] gi|254368335|ref|ZP_04984353.1| glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica 257] gi|290952978|ref|ZP_06557599.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica URFT1] gi|295313798|ref|ZP_06804371.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica URFT1] gi|109829735|sp|Q2A1D8|GATA_FRATH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|122324557|sp|Q0BK40|GATA_FRATO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217669|sp|A7NEM1|GATA_FRATF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|89144933|emb|CAJ80281.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella tularensis subsp. holarctica LVS] gi|115130357|gb|ABI83544.1| aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit A [Francisella tularensis subsp. holarctica OSU18] gi|134254143|gb|EBA53237.1| glutamyl-tRNA amidotransferase subunit A [Francisella tularensis subsp. holarctica 257] gi|156253918|gb|ABU62424.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A [Francisella tularensis subsp. holarctica FTNF002-00] Length = 481 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 205/466 (43%), Positives = 284/466 (60%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + ++N+ I + +A AE++D I G Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDADAIISAGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEYSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KP+YG SR G+++FA S DQAGI D AI+L AIAG E D+TCV + Sbjct: 179 SFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + L++ I +G+ + D L I + + + K GA+I + +P + Sbjct: 239 KQNHFTQDLEKDISSKVIGVDESLIKD-LPAQIQEAVSKTLDNFKKLGAEIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDG+RYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGIRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ + F Q VD I P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINQIFTQ-VDAIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFA-NNLPVGGQLMAKAFNDNIL 458 >gi|306818981|ref|ZP_07452698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus mulieris ATCC 35239] gi|304648174|gb|EFM45482.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mobiluncus mulieris ATCC 35239] Length = 513 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 211/493 (42%), Positives = 306/493 (62%), Gaps = 19/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E ++LR+ + ++ ELV +++ I+N + ++A++ V A A + D Sbjct: 3 SELYLQSATELAEKLRAGETTSEELVKIFLERIKNLDGTIHAFLFVDEAGALETARQVDA 62 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G+PI IKD T+G T S IL+G+ P Y++TV KL + G +LG Sbjct: 63 DRAAGKELPPYAGVPIAIKDNLVTRGRPTTCGSKILEGWLPPYDATVVLKLREAGLPVLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YG +PW + PGGS GGS+AAVA +L ++G+DT Sbjct: 123 KTNMDEFAMGSSTEHSAYGLTRNPWDL-----ERIPGGSGGGSAAAVAAYLAPWALGSDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG KPTYG SR G+++ A SLDQ G +TR V D+A L IAG+D Sbjct: 178 GGSIRQPGAVTGTVGAKPTYGAVSRYGLVAMASSLDQIGPVTRCVSDAAALHTIIAGHDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQG-----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT ++ PVPD A+ + + + VG+ K+ + + + + + + L+ A Sbjct: 238 LDATSLDEPVPDLSTAVTEVVANPNTTKLRVGVVKQISGEGFQAGVRQRFDEAVERLRAA 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTR 351 GA IVE+ P +Y+L AYY+I PAE SSNLAR+DGVRYGLRV G E M TR Sbjct: 298 GASIVEVDCPSFEYSLAAYYLIMPAEVSSNLARFDGVRYGLRVLPESGPVTAETMMAATR 357 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GT+VLS+ +D++Y A+K+RTL++RD AFEQ DV+++PT PT Sbjct: 358 EAGFGPEVKRRIILGTHVLSAGYFDAYYGSAQKVRTLVQRDLAAAFEQ-CDVLISPTAPT 416 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF G + ++ M NDV T+ NMAG+PAISVP + E +P+G+Q++ + Sbjct: 417 TAFKFGDKLDD--PMAMYLNDVATIPANMAGIPAISVPGGVAPEDGLPVGIQILAPARGD 474 Query: 471 ETLFSVGQIIEKE 483 +T+++ ++E + Sbjct: 475 KTMYAAAALVEAQ 487 >gi|170781463|ref|YP_001709795.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Clavibacter michiganensis subsp. sepedonicus] gi|169156031|emb|CAQ01167.1| glutamyl-tRNA(gln) amidotransferase subunit A [Clavibacter michiganensis subsp. sepedonicus] Length = 516 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 207/490 (42%), Positives = 316/490 (64%), Gaps = 20/490 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ ++ DRL S+D+S+V+ V +++ I++ + ++A++ V + A A E D + Sbjct: 4 DLTRLSAADLADRLASRDVSSVDAVRAHLDRIDHVDGDVHAFLHVSGELALGRAAEIDAQ 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +G L G+PI IKD T + + A S +L+G+ P Y++TV Q+L G V LGK Sbjct: 64 RADGAPLGPLAGVPIAIKDVLCTIDMPSTAGSRMLEGWTPPYDATVVQRLRAAGLVPLGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSS E S +G +PW PGGS GGS+AAVA F ++G+DTG Sbjct: 124 TNMDEFAMGSSTEHSAFGATHNPWDL-----NRIPGGSGGGSAAAVAAFEAPVALGSDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+ TG+VG+KPTYG SR G I+ A SLDQ G ++RTV DSA++ I G+D Sbjct: 179 GSIRQPAAVTGSVGVKPTYGGVSRYGAIALASSLDQVGPVSRTVLDSALVHDVIGGHDPR 238 Query: 242 DATCVNLPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T + P + A + S++G+ +G+ K+ + + + +++ ++ L+ AG Sbjct: 239 DSTSLTDQWPSFAEAARAGQREGSVKGLRIGVVKQLDGEGFQAGVTQRFREALALLEQAG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILEMYENTRSI 353 A+IV +S P+ ++A+ AYY+I PAEASSNLA++D VR+GLRV G + ++ TR Sbjct: 299 AEIVGVSAPNFEHAIAAYYLILPAEASSNLAKFDSVRFGLRVNPPGGGTVEDVMAATREA 358 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AF+Q VDV++TP+ PT+A Sbjct: 359 GFGPEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFDAAFQQ-VDVLVTPSAPTTA 417 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 F LG++ ++ +M ND+ T+ N+AG+P I +P L E +P+G+Q + P RE+ Sbjct: 418 FKLGEKLDDPLAM--YLNDLTTIPANLAGVPGIGLPIGLAPEDGLPVGIQFMA-PAREDA 474 Query: 473 -LFSVGQIIE 481 L++VG +E Sbjct: 475 RLYTVGAALE 484 >gi|311113173|ref|YP_003984395.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rothia dentocariosa ATCC 17931] gi|310944667|gb|ADP40961.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rothia dentocariosa ATCC 17931] Length = 531 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 223/509 (43%), Positives = 317/509 (62%), Gaps = 37/509 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN------------SQMNAYIEVV 48 M+EL + +E+ +L + +ISAVEL ++I IE ++ S +NA++ + Sbjct: 1 MNELIVLTAAEAAQKLAAGEISAVELTRAHIDRIEATDGTPLSESRADGKSGLNAFLHIN 60 Query: 49 AQKARAAAEESD-KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 ++A A+ D R + L G+PI +KD TKG T A S +L+G+ Y+ TV Sbjct: 61 REEALETAQAVDADRAAGQELPALAGVPIAVKDLIVTKGQPTTAGSRMLEGWMSPYDGTV 120 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 T+K+ +LGK N+DEFAMGSSNE S +G V +PW ++D S GGS++AV Sbjct: 121 TRKVRAARMPILGKTNLDEFAMGSSNEHSAFGVVRNPW-ALDRAPGG----SGGGSASAV 175 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A F ++GTDTGGSIRQPAS TG+VG+KPTYG SR G+I+ A SLDQ G RTV D Sbjct: 176 AAFQAPLALGTDTGGSIRQPASLTGSVGVKPTYGSVSRYGVIAMASSLDQVGPCARTVLD 235 Query: 228 SAILLKAIAGYDECDATCVNLPVPDY-----ERALDQSIQGMTVGIPKEY----RLDYLS 278 +A+L +AIAG+D D+T +N PV + E A +S++GM +G+ KE + Sbjct: 236 TAMLHEAIAGHDPMDSTSLNEPVGSFAAQALEGANPESLKGMRIGVIKELGGGSGSGFQQ 295 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 +D+ + + L+ AGA++VE+SLP + A+ AYY+I +E SSNLA+YDGVRYGLRV Sbjct: 296 GVLDR-FHDALKLLEKAGAEVVEVSLPSVKEAISAYYMIMSSEVSSNLAKYDGVRYGLRV 354 Query: 339 EGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 +D I + TR GFG E K RI++GTY LS+ YD+HY A ++RTLI+RD+T Sbjct: 355 IPEDGPVTIERVMAATREAGFGDETKRRIILGTYALSAGNYDAHYGAALRVRTLIQRDYT 414 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC- 453 AFE+ DV+++PT+PT+AF LG E+ M DV TV VN+AG+PAIS+PA + Sbjct: 415 AAFEK-CDVLVSPTSPTTAFKLG-EKTKGDPMAMYLGDVATVPVNLAGVPAISLPAGVAD 472 Query: 454 EKKMPLGLQLIGQPFREET-LFSVGQIIE 481 E +P+G+Q P RE+ L+ VG +E Sbjct: 473 EDGLPVGIQFTA-PAREDARLYRVGAGLE 500 >gi|226504284|ref|NP_001146476.1| hypothetical protein LOC100280064 [Zea mays] gi|226958562|ref|NP_001152947.1| glutamyl-tRNA [Zea mays] gi|195647232|gb|ACG43084.1| glutamyl-tRNA [Zea mays] gi|219887449|gb|ACL54099.1| unknown [Zea mays] Length = 543 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 197/483 (40%), Positives = 303/483 (62%), Gaps = 21/483 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD---AR 69 R+ L S + +A ++ Y+ + + + ++I V A AEE D+RI +G+ Sbjct: 52 RESLLSGERTAADITSEYLSRLRRTEPTLRSFIHVADAAAEREAEELDRRIASGEKDAVG 111 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ +G+KD T + + S ILDG+RP Y++T ++L + GA++LGK N+DEF M Sbjct: 112 PLAGVLVGVKDNLCTANMPSTGGSRILDGYRPAYDATAVRRLREAGAIVLGKTNLDEFGM 171 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ E S + +PW D PGGSSGGS+AAV+ C S+G+DTGGS+RQPAS Sbjct: 172 GSTTEGSAFQVTTNPW-----DDSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPAS 226 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYGR SR G++++A SLD G +V D+A +L +AG+D+ DAT + Sbjct: 227 FCGVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVFDTATILSVVAGHDKMDATSSSQV 286 Query: 250 VPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 VP+Y L + + G+ +GI +E + ++ + + + S L+ G+ + E+ Sbjct: 287 VPEYASELVSLDLLESKPLNGVRIGIIQETLGEGVASGVVSSIKGAASHLEQLGSVVEEV 346 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SLP LPAYYI++ +EASSNL+RYDG+RYG +V D+ E+Y +R+ GFG EVK R Sbjct: 347 SLPSFSLGLPAYYILASSEASSNLSRYDGIRYGGQVSADDLNELYGESRANGFGHEVKMR 406 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ YD++Y RA+++RTL+K+ F +A E+ D++++P P++A+ +G++ N+ Sbjct: 407 ILMGTYALSAGYYDAYYKRAQQVRTLVKQSFKDALER-YDILISPAAPSAAYKIGEKIND 465 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQI 479 +M D+ TV VN+AGLPA+ VP E +P+GLQ++G PF E L VG I Sbjct: 466 PLAM--YAGDIMTVNVNLAGLPALVVPCGFVEGGAAGLPVGLQMMGSPFCEGNLLRVGHI 523 Query: 480 IEK 482 E+ Sbjct: 524 FEQ 526 >gi|300743921|ref|ZP_07072941.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rothia dentocariosa M567] gi|300380282|gb|EFJ76845.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rothia dentocariosa M567] Length = 531 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 224/509 (44%), Positives = 319/509 (62%), Gaps = 37/509 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN------------SQMNAYIEVV 48 M+EL + +E+ +L + +ISAVEL ++I IE ++ S +NA++ + Sbjct: 1 MNELIVLTAAEAAQKLAAGEISAVELTRAHIDRIEATDGTPLSENRADGKSGLNAFLHIN 60 Query: 49 AQKARAAAEESD-KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 ++A A+ D R + L G+PI +KD TKG T A S +L+G+ Y+ TV Sbjct: 61 REEALETAQAVDADRAAGQELPALAGVPIAVKDLIVTKGQPTTAGSRMLEGWMSPYDGTV 120 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 T+K+ +LGK N+DEFAMGSSNE S +G V +PW ++D S GGS++AV Sbjct: 121 TRKVRAARMPILGKTNLDEFAMGSSNEHSAFGVVRNPW-ALDRAPGG----SGGGSASAV 175 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A F ++GTDTGGSIRQPAS TG+VG+KPTYG SR G+I+ A SLDQ G RTV D Sbjct: 176 AAFQAPLALGTDTGGSIRQPASLTGSVGVKPTYGSVSRYGVIAMASSLDQVGPCARTVLD 235 Query: 228 SAILLKAIAGYDECDATCVNLPV-PDYERALD----QSIQGMTVGIPKEY----RLDYLS 278 +A+L +AIAG+D D+T +N PV P +AL+ +S++GM +G+ KE + Sbjct: 236 TAMLHEAIAGHDPLDSTSLNEPVGPFAAQALEGANPESLKGMRIGVIKELGGGSGSGFQQ 295 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 +D+ + + L+ AGA++VE+SLP + A+ AYY+I +E SSNLA+YDGVRYGLRV Sbjct: 296 GVLDR-FHDALKLLEKAGAEVVEVSLPSVKEAISAYYMIMSSEVSSNLAKYDGVRYGLRV 354 Query: 339 EGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 +D I + TR GFG E K RI++GTY LS+ YD+HY A ++RTLI+RD+T Sbjct: 355 IPEDGPVTIERVMAATREAGFGDETKRRIILGTYALSAGNYDAHYGAALRVRTLIQRDYT 414 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC- 453 AFE+ DV+++PT+PT+AF LG E+ M DV TV VN+AG+PAIS+PA + Sbjct: 415 AAFEK-CDVLVSPTSPTTAFKLG-EKTKGDPMAMYLGDVATVPVNLAGVPAISLPAGVAD 472 Query: 454 EKKMPLGLQLIGQPFREET-LFSVGQIIE 481 E +P+G+Q P RE+ L+ VG +E Sbjct: 473 EDGLPVGIQFTA-PAREDARLYRVGAGLE 500 >gi|154499975|ref|ZP_02038013.1| hypothetical protein BACCAP_03632 [Bacteroides capillosus ATCC 29799] gi|150271573|gb|EDM98830.1| hypothetical protein BACCAP_03632 [Bacteroides capillosus ATCC 29799] Length = 488 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 202/474 (42%), Positives = 291/474 (61%), Gaps = 11/474 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ D+S E + + + +N +I ++A A A+ + + + L G+P Sbjct: 16 IKAGDVSIAEATQTALDVMAEREPSLNCFITAAGEQAMARAQALQAGVKDAKS-PLYGVP 74 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IKD TKG+ T S IL F P Y++ VT++L + GAV LGKLNMDEFAMGS+ ET Sbjct: 75 MAIKDNICTKGVKTCCASKILGDFTPPYDAAVTERLTEAGAVSLGKLNMDEFAMGSTTET 134 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGP +PW + PGGSSGG++AAVA C ++G+DTGGSIRQPASF G G Sbjct: 135 SFYGPTRNPWDT-----GRVPGGSSGGAAAAVAARECWFALGSDTGGSIRQPASFCGVTG 189 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYG SR G+I++A SLDQ G + R+ D A +L AI G D+ DAT +++P Sbjct: 190 IKPTYGTVSRYGLIAYASSLDQIGPLARSAADCAAVLDAIQGKDKRDATSLDVPAGSLLS 249 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L I+GM +G+P + + L P + + + L+ GA + S P +Y +P YY Sbjct: 250 GLTGDIRGMKIGLPSDCFGEGLEPQVADAVKATAAVLEARGATVEPFSFPLMKYMVPTYY 309 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 II+ AEASSNL+RYDGV+YG R E +D+ ++Y TR+ GFG EVK RI++GT+VLSS Sbjct: 310 IIACAEASSNLSRYDGVKYGWRAPEYEDLTDLYCRTRTEGFGSEVKRRILLGTFVLSSGY 369 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++Y +A +++ LIK F AFEQ D++LTP PT+A LG E+ S + +D++ Sbjct: 370 YDAYYKKALQVKALIKEAFDRAFEQ-YDLLLTPVAPTTAPKLG--ESLSDPLKMYLSDIY 426 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 TV N+AGLPA+S+P + +P+G QLIG E + + + + Y R Sbjct: 427 TVPANLAGLPALSMPCGF-DGGVPIGAQLIGPALGEAAVLNAAHAFQLDTDYHR 479 >gi|91786131|ref|YP_547083.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Polaromonas sp. JS666] gi|91695356|gb|ABE42185.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Polaromonas sp. JS666] Length = 511 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 216/488 (44%), Positives = 315/488 (64%), Gaps = 24/488 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+ + V+E RL ++++S+VE+ ++ I+ + + A++ + A A +D Sbjct: 8 TDLHDLGVAELAARLAAREVSSVEVTRHFLARIQQ-HEGLGAFLATNPDVSLAQARAADA 66 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW----DNGAV 117 R+ G+ L G+P+ KD F T+ T A S +L G+R +++TV +L G V Sbjct: 67 RLAAGERTPLLGVPLAHKDVFVTRDFPTTAGSKMLAGYRSPFDATVVSRLGVAPGGAGMV 126 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGKLN DEFAMGS N+ S Y PV +PW D+T PGGSSGGS+AAVA L A+ G Sbjct: 127 TLGKLNCDEFAMGSGNDNSAYQPVHNPW---DTTR--VPGGSSGGSAAAVAARLVPAATG 181 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGSIRQPAS TG GIKPTYGRCSR G+++FA SLDQAG + R+ D A+LL A+AG Sbjct: 182 TDTGGSIRQPASLTGITGIKPTYGRCSRYGMVAFASSLDQAGPMARSALDCALLLSAMAG 241 Query: 238 YD-ECDATCVNLPVPDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 D + D+T ++LPV +Y L ++G+ +G+P ++ S + K + Sbjct: 242 PDPDRDSTSLDLPVTNYAAELAAIGSQETRSMPLKGLRIGLPTQFFGAGCSADVLKAVRA 301 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEM 346 ++ + GA +V++SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R D+ +M Sbjct: 302 ALAEFEKLGATLVDVSLPLTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAASYSDLTDM 361 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 Y+ +RS GFG EV RIMIGTYVLS YD++YL+A+KIR LI +DF +AF Q DVI Sbjct: 362 YKKSRSEGFGDEVTRRIMIGTYVLSHGYYDAYYLKAQKIRRLIAQDFQKAFAQ-CDVIAG 420 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P +PT A+ +G++E++ + + D++T++ ++AGLP +S+PA L MP+GLQLIG Sbjct: 421 PVSPTVAWKIGEKEDD--PVANYLADIYTLSSSLAGLPGMSIPAGLGAHGMPVGLQLIGN 478 Query: 467 PFREETLF 474 F+E L Sbjct: 479 YFQETQLL 486 >gi|194335583|ref|YP_002017377.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pelodictyon phaeoclathratiforme BU-1] gi|229485995|sp|B4SCS6|GATA_PELPB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|194308060|gb|ACF42760.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 475 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 205/482 (42%), Positives = 295/482 (61%), Gaps = 12/482 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + R RL S I+ E+V Y++ IEN N YI V +A A D+++ Sbjct: 1 MQFSSYEDLRSRLVSHAITCEEVVRFYLERIENHRGD-NIYITVFHDQALERARTLDRKL 59 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G + L G+P+ IKD A K S IL+ + Y++T +L + A+ LGK Sbjct: 60 REGGNPGKLFGMPMAIKDNIAMKNCRLTCASKILENYESVYDATAVLRLEEADAIFLGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S +G V +P+ D T PGGSSGGS+AAVA L ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAFGNVPNPF---DKTR--VPGGSSGGSAAAVANGLALVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F VG+KPTYGR SR G+++FA S DQ G++ D A++L +AG DE D Sbjct: 175 SVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLGLNCDDVALVLGVMAGKDEGD 234 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT PV DY + S+ G+ +G+PKEY + L+P + + + + L+ GA++V Sbjct: 235 ATSSRHPVADYASEMATLSVDGLKIGVPKEYFPETLNPEVSRMVKGKLEELRAQGAELVP 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVK 360 ++LP + YA+ AYYI+ AEASSNLAR+DG RYG R E +D+ MY N+R+ GFG+EVK Sbjct: 295 VTLPDSAYAIAAYYILVTAEASSNLARFDGARYGYRSEMSEDLAAMYVNSRTEGFGREVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R + + + EA ++ VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRVFQDRYREALDK-VDVIAGPTSPFPPFGIGDKT 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N M DVFTV ++ G+PAISVP +P+G+ LI F E L + + + Sbjct: 414 ENPLEM--YLADVFTVPASIVGMPAISVPLGFDSMNLPVGMHLICNFFEEGKLLGIARHM 471 Query: 481 EK 482 ++ Sbjct: 472 QR 473 >gi|332529929|ref|ZP_08405880.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Hylemonella gracilis ATCC 19624] gi|332040626|gb|EGI77001.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Hylemonella gracilis ATCC 19624] Length = 503 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 214/496 (43%), Positives = 307/496 (61%), Gaps = 27/496 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+ ++V++ +LR K +SAVE ++ I+ ++ + A++ V + A +D Sbjct: 1 MSDLHELSVAQLAAQLRQKKVSAVEAAQHFLARIK-THQNLAAFLAVDEEATLTQARAAD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN------ 114 R+ GD+ L G+PI KD F T+ + A S +L G+R +++TV +L Sbjct: 60 ARLAAGDSAPLLGVPIAHKDIFVTRDFPSTAGSKMLTGYRSPFDATVVARLGQGAPDQGP 119 Query: 115 --GAVMLGKLNMDEFAMGSSNET--------SYYGPVISPWRSMDSTDKFTPGGSSGGSS 164 GAV LGKL+ DEFAMGSSNE S PV +PW PGGSSGGS+ Sbjct: 120 GAGAVTLGKLSCDEFAMGSSNEAVAVPAVGFSSATPVKNPWDPAR-----VPGGSSGGSA 174 Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 AAVA L A+ GTDTGGSIRQPASF G GIKPTYGR SR G+I++A SLDQAG + R+ Sbjct: 175 AAVAARLAPAATGTDTGGSIRQPASFCGITGIKPTYGRASRYGMIAYASSLDQAGPMARS 234 Query: 225 VRDSAILLKAIAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK 283 D A+LL A+ G D + D+T ++LP D+ R L+ + G+ +GIPKE+ L+ + Sbjct: 235 AEDCALLLSALCGPDLDRDSTSLDLPAEDFSRGLNDKVDGLRIGIPKEFFGAGLAADVRA 294 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KD 342 + + GAK+VEISLP T+ A+P YYII+PAEASSNL+R+DGV++G R + D Sbjct: 295 AIDAALKEYEKLGAKLVEISLPRTELAIPVYYIIAPAEASSNLSRFDGVKFGHRAKDYTD 354 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 +L+MY+ +RS GFG+EV+ RIMIG YVLS YD++YL+A+KIR ++ DF AF Q D Sbjct: 355 LLDMYKKSRSEGFGEEVQRRIMIGAYVLSHGYYDAYYLQAQKIRRMLADDFQNAF-QHCD 413 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 VI P P+ A+ +G ++ + D++T+ ++AGLP +S+P + +P+GLQ Sbjct: 414 VIAGPAAPSVAWQIGGHGDD--PVADYLADIYTLPASLAGLPGLSLPVGFGDGGLPVGLQ 471 Query: 463 LIGQPFREETLFSVGQ 478 LIG +E L + Sbjct: 472 LIGNYLQEAKLLNAAH 487 >gi|328872980|gb|EGG21347.1| glutamyl-tRNA amidotransferase A subunit [Dictyostelium fasciculatum] Length = 529 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 207/508 (40%), Positives = 312/508 (61%), Gaps = 37/508 (7%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRII 64 + ++ + R L ++ EL+D ++ IE NA++ V + + EESD+RI Sbjct: 2 YRSIKQIRVDLLGGKLTTRELIDGCVKRIEGFKKSTNAFVSVQSSSELDRLVEESDRRIK 61 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 GDAR LEG+PI +KD ++T G+ T A S +L + P +++TV +L GA+++GK NM Sbjct: 62 GGDARPLEGVPIAVKDNYSTDGLRTTAGSKMLSNYTPSFDATVVARLKHAGAIIIGKTNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEF+MGSS+ S +G V++PW S+ TD++ GGSSGGS+AAVA +CAA+IG+DTGGS+ Sbjct: 122 DEFSMGSSSTNSIHGSVVNPW-SIGKTDQYVAGGSSGGSAAAVAAGMCAAAIGSDTGGSV 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPAS+ G VG KP+YG SR G+IS+A SLD G++ ++ D+A + I G DE D+T Sbjct: 181 RQPASYCGVVGYKPSYGTVSRYGLISYASSLDTPGVLANSLDDAAAVADIIMGRDELDST 240 Query: 245 CVNLPVP------DYERALDQSI------QGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 ++ P + + L +S+ + + GIP ++ + + I + W+ + Sbjct: 241 SLSTYPPARYVTSNTKNFLQKSVASNKIGRPLVFGIPTDFIVKEMDDEIFQLWRNVAREI 300 Query: 293 KDAGAK-IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--------- 342 +++G +V ISL H ++ALP+YYI++ +EASSNLARYDGVRYG V+G+D Sbjct: 301 EESGVGCVVPISLTHNRFALPSYYILATSEASSNLARYDGVRYGFNVKGQDQGEDGENNQ 360 Query: 343 --------ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 + E+Y RSIGF EVK RI++GT LS D++Y +A++IR LI D++ Sbjct: 361 SNSLDIKTLRELYRENRSIGFSDEVKRRILLGTMALSRGSRDNYYKKAQQIRRLISDDYS 420 Query: 395 EAFE-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 AF Q VDV+LTPT P+ AF L + + + NDV T+ N+AGLP+IS+P + Sbjct: 421 HAFNVQNVDVVLTPTAPSPAFKLDSKMD---PIEMYLNDVMTIPANLAGLPSISIPLQVS 477 Query: 454 -EKKMPLGLQLIGQPFREETLFSVGQII 480 K++PL LQL GQ + TL ++ Sbjct: 478 PTKQLPLSLQLTGQRLNDHTLLQAASLV 505 >gi|147919419|ref|YP_686842.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [uncultured methanogenic archaeon RC-I] gi|110622238|emb|CAJ37516.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [uncultured methanogenic archaeon RC-I] Length = 464 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 217/457 (47%), Positives = 286/457 (62%), Gaps = 26/457 (5%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILD 97 S++NA+I + +A A+ D+ + G L GI + IKDC TKG+ T S IL Sbjct: 19 KSKLNAFITLNKAQALETAQAVDEGKVTG---RLAGITVAIKDCITTKGLQTTCGSKILQ 75 Query: 98 GFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPG 157 G+ P +++ V +L GAV+ GK NMDEFAMG+S E S YGP +PW D T PG Sbjct: 76 GYIPPFDAEVVARLRKEGAVITGKANMDEFAMGTSTENSAYGPTRNPW---DLTR--VPG 130 Query: 158 GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ 217 GSSGGS+AAVAG S+GTDTGGS+R PA+F G VGIKPTYG SR G++++A SL+Q Sbjct: 131 GSSGGSAAAVAGLESRMSLGTDTGGSVRCPAAFCGVVGIKPTYGLVSRYGVVAYANSLEQ 190 Query: 218 AGIITRTVRDSAILLKAIAGYDECDATCV----NLPVPDYERALDQSIQGMTVGIPKEYR 273 G I R V D+A+LL IAG D D+T V + DY L + ++G+T+G+PKEY Sbjct: 191 VGPIARNVGDAALLLDVIAGGDPKDSTSVAEADKVCYTDY---LKEDVKGLTIGVPKEYF 247 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 + + +++ GI L + GA EISLP T+YAL AYYII+ EASSNLAR+DG+R Sbjct: 248 SEGMDKKVERAVWDGIQKLAELGADYKEISLPTTKYALSAYYIIAMCEASSNLARFDGLR 307 Query: 334 YGLRVEGKDILEMYENT----RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 YGLR GKD E + T R+ GFG EVK RIM+GTY LS Y +YL+A +IRTLI Sbjct: 308 YGLRT-GKD--ENWHTTFSRIRAEGFGPEVKRRIMLGTYALSEGYYGKYYLKALQIRTLI 364 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 + DF AF+ VDVI PT PT AF +G++ ++ SM DV T+ VN+AG+P+IS+P Sbjct: 365 RNDFANAFKD-VDVIAAPTMPTPAFKIGEKADDPLSM--YLADVNTLPVNLAGVPSISIP 421 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 K+P+G+QLIG F E L E + Sbjct: 422 CGFA-GKLPIGMQLIGDLFAEPLLIQTAYTFEANTNF 457 >gi|256824833|ref|YP_003148793.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Kytococcus sedentarius DSM 20547] gi|256688226|gb|ACV06028.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Kytococcus sedentarius DSM 20547] Length = 535 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 219/483 (45%), Positives = 308/483 (63%), Gaps = 23/483 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLE 72 ++LR +I++ +L +++ IE N +NA++ V A+ A A A E D R + L Sbjct: 25 EKLRDGEITSEQLTRAHLDRIEQVNGVLNAFLVVDAEGALATAREVDAARAAGEELHPLA 84 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI +KD T+G+ T A S +L+G+ P Y++T+ Q+L +LGK NMDEFAMGSS Sbjct: 85 GVPIAVKDIACTQGLPTTAGSRMLEGWVPPYDATIVQRLKAARMPILGKTNMDEFAMGSS 144 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S +GP +PW D T PGGS GGS+AAVA L +IG+DTGGSIRQPA+ TG Sbjct: 145 TEHSAFGPTRNPW---DVTR--IPGGSGGGSAAAVAAHLAPLAIGSDTGGSIRQPAAVTG 199 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 +VG KPTYG SR GII+ A SLDQ G +RTV DSA L + I G+D D+T ++ P P Sbjct: 200 SVGSKPTYGGVSRHGIIALASSLDQIGPCSRTVADSAALHEVIGGHDPADSTSIDAPAPA 259 Query: 253 YERALDQ-------SIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 A ++ G+ VG+ KE +D + + + Q I+ L++AGA++VE+S Sbjct: 260 ATAAARSGQEDSAGTLAGLRVGVVKELTDVDGYQAGVKELFDQRIAQLREAGAEVVEVSC 319 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDIL---EMYENTRSIGFGQEV 359 P + AYY+I P+EASSNLARYD +RYGLRV +G D ++ +R GFG+EV Sbjct: 320 PSFALGMAAYYLILPSEASSNLARYDAMRYGLRVGPDGVDAPSAEQVMAASRDAGFGEEV 379 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI++GTY LSS YD++Y +A+K+RTLI+RDF AFEQ DV+L+PT PT+AFPLG + Sbjct: 380 KRRIILGTYALSSGYYDAYYGKAQKVRTLIQRDFEAAFEQ-CDVLLSPTAPTTAFPLGDK 438 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ +M ND+ T+ VN+AG A+ +P L E +P GLQ+I +E +++VG Sbjct: 439 LDDPLAM--YLNDIATIPVNLAGNCALGLPMGLAAEDGLPAGLQVIAPAGADERMYTVGA 496 Query: 479 IIE 481 IE Sbjct: 497 AIE 499 >gi|332671241|ref|YP_004454249.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cellulomonas fimi ATCC 484] gi|332340279|gb|AEE46862.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Cellulomonas fimi ATCC 484] Length = 504 Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 210/479 (43%), Positives = 311/479 (64%), Gaps = 21/479 (4%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGI 78 ++++V++ +++ I + ++A++ V A +A A A + D R G+ L G+PI + Sbjct: 20 EVTSVKVTQAHLDRIAAVDGAVHAFLHVSAAEALATAADVDARRAAGEQLHPLAGVPIAV 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD TKG+ T A S IL+G+ P Y++T+ +++ G +LGK NMDEFAMGSS E S Y Sbjct: 80 KDVVVTKGLPTTAGSKILEGWVPPYDATLVERIKAAGLPILGKTNMDEFAMGSSTEHSAY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW D+ PGGS GGS+AAVA + +IGTDTGGSIRQP + TGTVG+KP Sbjct: 140 GNTHNPW----DLDRI-PGGSGGGSAAAVAAYEAPLAIGTDTGGSIRQPGAVTGTVGVKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+I+ A SLDQAG +TRTV DSA+L + I G+D D+T + P+P A Sbjct: 195 TYGSVSRYGLIAMASSLDQAGPVTRTVLDSALLHELIGGHDPLDSTSIPEPLPALVEAAR 254 Query: 259 QS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 Q + G+ VG+ +E + + + +++ ++ L+ AGA+IVE+S PH +YAL AY Sbjct: 255 QGASGDLSGVRVGVIRELQGEGYQAGVLARFEESLALLRQAGAEIVEVSCPHFEYALGAY 314 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGFGQEVKHRIMIGTYVL 370 Y+I P+EASSNLA++DG+R+GLRVE + E TR GFG EVK R+++GTY L Sbjct: 315 YLIMPSEASSNLAKFDGMRFGLRVEPSEGPATAERVMSATRGQGFGDEVKRRVILGTYAL 374 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S+ YD++Y A+K+RTLI+RDF AF Q DV+++PT PT+AF LG++ ++ +M Sbjct: 375 SAGYYDAYYGSAQKVRTLIQRDFDAAFAQ-ADVLVSPTAPTTAFKLGEKLDDPLAM--YL 431 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG----QIIEKEAG 485 NDV T+ N+AG+P +SVP + + +P+G Q++ ++ L+ VG ++EKE G Sbjct: 432 NDVATIPANLAGVPGLSVPNGVSDDGLPVGFQVLAPAKADDRLYRVGAALEALLEKEWG 490 >gi|148270623|ref|YP_001245083.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermotoga petrophila RKU-1] gi|147736167|gb|ABQ47507.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermotoga petrophila RKU-1] Length = 472 Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 197/473 (41%), Positives = 300/473 (63%), Gaps = 23/473 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L+ D L ++AI+ + + A+I V K + E++ K G Sbjct: 10 DSLKLPDEERENLPRLSLEAIKKFDPHVKAFISV---KEDVSVEKNGK---------FWG 57 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IPI IKD T G+ T S IL+ + +++TV +KL + G ++GK N+DEFAMGSS Sbjct: 58 IPIAIKDNILTLGMKTTCASKILENYESVFDATVVKKLKEAGFAIVGKANLDEFAMGSST 117 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S + P +PW + PGGSSGGS+AAVA + A++G+DTGGS+RQPAS G Sbjct: 118 ERSAFFPTRNPWDL-----ERVPGGSSGGSAAAVASGMVVAALGSDTGGSVRQPASLCGV 172 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KPTYG SR G+++FA SLDQ G IT+TV+D+AIL++ I+G DE DAT ++ V D+ Sbjct: 173 VGYKPTYGLVSRYGLVAFASSLDQIGPITKTVKDAAILMEIISGKDENDATTMDRKV-DF 231 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ + GM +P+E + + + +++ + L+ GAK+ ++S+PH +Y++ Sbjct: 232 LSEIENGVAGMRFAVPQEIYEHKIEDGVAERFEESLKLLEKLGAKVEKVSIPHMKYSVAV 291 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YY+I+PAEASSNLAR+DGV+YGLRV+ K + EMY TR++GFG+EV+ RIMIGT+ LS+ Sbjct: 292 YYVIAPAEASSNLARFDGVKYGLRVKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAA 351 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 Y++++ +A K+R I + E Q D ILTPT+P +AF +G+ ++ + + D+ Sbjct: 352 YYEAYFNKAMKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIKD---PLTYYLMDI 407 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT+ N+AGLPAI+VP +P+G+Q+IG+ F + +F + + IEK + Y Sbjct: 408 FTIPANLAGLPAINVPFGFS-NNLPVGVQVIGKRFADGKVFRIARAIEKNSPY 459 >gi|332525709|ref|ZP_08401858.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rubrivivax benzoatilyticus JA2] gi|332109268|gb|EGJ10191.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rubrivivax benzoatilyticus JA2] Length = 495 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 220/495 (44%), Positives = 315/495 (63%), Gaps = 20/495 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+ + V+E+ LR+K S+VELV + + A +++ + A++ V A A AAA +D Sbjct: 3 AALHRLGVAETARALRAKQFSSVELVQALL-ARADAHRSLGAFLAVDADGALAAARAADA 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+A L G+PI KD F T + A S +L G+R +++TV +L G V LGK Sbjct: 62 ALAAGNAPALAGVPIAHKDIFVTTDQPSTAGSKMLAGYRSPFDATVVARLKAAGTVTLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN DEFAMGS+NE S +G V +PW D+T PGGSSGGS+AAVA L AA+ GTDTG Sbjct: 122 LNCDEFAMGSANENSAFGVVQNPW---DTTR--VPGGSSGGSAAAVAARLVAAATGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQP+SF G GIKPTYG CSR G+I+FA SLDQAG + R+ D A+LL A++G+DE Sbjct: 177 GSIRQPSSFCGITGIKPTYGVCSRYGMIAFASSLDQAGPMARSAEDCALLLSAMSGFDER 236 Query: 242 DATCVNLPVPDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 DAT P DY + + + G+ +G+P+E+ + LS + + ++ L Sbjct: 237 DATSAERPPQDYHAQMLAAREGASATRPLAGLRIGLPREFFPEGLSADVAAAVRGALAEL 296 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTR 351 + GA +V++SLP T+ ++P YYII+PAEASSNL+R+DGV++G R + D+L+MY+ TR Sbjct: 297 EKLGATLVDVSLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRAAQYTDLLDMYKKTR 356 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RIMIGTYVLS YD++YL+A+K+R +I DF AF D+I P PT Sbjct: 357 AEGFGPEVKRRIMIGTYVLSHGYYDAYYLQAQKLRRMIADDFQAAFRD-CDLIAGPVAPT 415 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 A+ LG++ + + D+FT+ ++AGLP +SVPA +P+GLQL+G F E Sbjct: 416 VAWQLGEQGD---PLQAYLADIFTLPASLAGLPGMSVPAGTGAHGLPVGLQLVGNYFDEG 472 Query: 472 TLFSVGQIIEKEAGY 486 L +++ + Sbjct: 473 RLLHAAHALQQATDF 487 >gi|319778947|ref|YP_004129860.1| Aspartyl-tRNA(Asn),Glutamyl-tRNA(Gln) amidotransferase subunit A [Taylorella equigenitalis MCE9] gi|317108971|gb|ADU91717.1| Aspartyl-tRNA(Asn),Glutamyl-tRNA(Gln) amidotransferase subunit A [Taylorella equigenitalis MCE9] Length = 503 Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 204/498 (40%), Positives = 300/498 (60%), Gaps = 28/498 (5%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + ++ R L +K++SA+EL ++ E S +NA++ + A A+ +D+ I Sbjct: 1 MQLKSIHSVRKALDNKEVSALELAKLCLEKAEKL-SHLNAFLHIDHDLTLAQAKVADELI 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L GIPI KD F TKG T A S +L + +++TV + L GAV +GKLN Sbjct: 60 AKGNHSILTGIPIAHKDVFVTKGWRTTASSKMLSNYVSPFDATVVEHLLSAGAVNIGKLN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 DEFAMGS N+ S +GP +PW PGGSSGGS+AAVA + A+ GTDTGGS Sbjct: 120 CDEFAMGSGNKNSAFGPCKNPWDI-----NAVPGGSSGGSAAAVAAGIVCATTGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQP++ G GIKPTYG SR G+I+FA SLDQAG I T D +L ++G+D D+ Sbjct: 175 VRQPSALCGVSGIKPTYGSVSRYGMIAFASSLDQAGPIAHTCEDLVEMLDVMSGFDPKDS 234 Query: 244 TCVNL----------PVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 T + + D++ +L ++ + G+ +G+PKEY + LS + + Sbjct: 235 TSLEVCGVSKNAQGRVKSDFQASLSKFNSNKEKPLSGVRIGVPKEYFAEGLSDEVKAATE 294 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILE 345 I + GA+ VE+SLP T+YA+PAYY+I+PAEASSNL+RYDGVRYG R + I + Sbjct: 295 AAIEKFVELGARRVEVSLPRTKYAIPAYYVIAPAEASSNLSRYDGVRYGHRSSNYQGIEQ 354 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 M +RS GFG EV+ RIM+GTYVLS YD++YL+A+++R L+ +DF ++ D I+ Sbjct: 355 MMSRSRSEGFGPEVQRRIMVGTYVLSHGYYDAYYLQAQRVRRLLAQDFDRVLKEECDFIV 414 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL--CEKKMPLGLQL 463 P TPT A +G EN+ D++T+ V++AGLP +S+P E + P+GLQ+ Sbjct: 415 GPVTPTVAKNIG--ENSDDVTADWLADIYTLGVSLAGLPGMSIPCGFGGTEGRRPIGLQI 472 Query: 464 IGQPFREETLFSVGQIIE 481 +G+ F E L ++G + + Sbjct: 473 VGKHFDEGALLALGHVYQ 490 >gi|284045038|ref|YP_003395378.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Conexibacter woesei DSM 14684] gi|283949259|gb|ADB52003.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Conexibacter woesei DSM 14684] Length = 488 Score = 349 bits (895), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 211/489 (43%), Positives = 303/489 (61%), Gaps = 21/489 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + +E+ ++LR +S EL D+Y + + + + A AA E+ Sbjct: 4 TDLIALTAAEAAEQLRHGHVSQTELFDAYRERAAADRAAADDGLNAYTWVADAAPAET-- 61 Query: 62 RIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G A D L G+P+ +KD F T+G+ +Q+ S IL G+RP Y + V ++L G+ +L Sbjct: 62 ----GAAHDAPLHGVPLAVKDLFCTEGVPSQSGSRILAGYRPPYTAHVVEQLERAGSTLL 117 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N DEFAMGSSNE S +GPV +PW + PGGSSGGS+AAVA L ++GTD Sbjct: 118 GKTNQDEFAMGSSNENSAFGPVRNPWDR-----ERVPGGSSGGSAAAVAAGLAPWALGTD 172 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G VG+KPTYG SR G+I+FA SLDQAG TR V D+A+L + + G D Sbjct: 173 TGGSIRQPAALCGIVGLKPTYGSVSRYGMIAFASSLDQAGPFTRDVTDAALLYRHMVGRD 232 Query: 240 ECDATCVNLP-VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 E D+T + P + + +D ++G+ +G+P+E + + + + + ++ + GA Sbjct: 233 ERDSTSLAHPDAIELPKGVD--LKGIRLGVPEELTGEGIESGVREAFNATLALAEQLGAT 290 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQ 357 + LPH +AL AYY+I+PAEASSNLAR+DGVRYG R + D+L+MY TR+ GFG Sbjct: 291 VETTHLPHAPHALSAYYLIAPAEASSNLARFDGVRYGHRTQDPDDLLDMYVRTRAEGFGP 350 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIM+GTY LSS YD++Y RA+K+RT I DF AF D I+TPT PT AF LG Sbjct: 351 EVKRRIMLGTYALSSGYYDAYYGRAQKVRTKISEDFRAAFGS-FDFIVTPTAPTVAFRLG 409 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + M D TV +++AG+PAIS+P L + +P+G Q+ G F E L + Sbjct: 410 EKTADPLEM--YLQDFCTVPMSLAGIPAISIPNGLSD-GLPVGFQIAGPAFSENRLLNAA 466 Query: 478 QIIEKEAGY 486 ++E+ G+ Sbjct: 467 YVLEQALGF 475 >gi|308176662|ref|YP_003916068.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arthrobacter arilaitensis Re117] gi|307744125|emb|CBT75097.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arthrobacter arilaitensis Re117] Length = 512 Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 219/496 (44%), Positives = 309/496 (62%), Gaps = 26/496 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ +E +LR+ + ++VE V +++ I + +NA++ V A++A A A E D Sbjct: 1 MNELIKLSATELAAKLRAGETTSVEAVQAHLDRITEVDGTLNAFLHVNAEEALAVAAEVD 60 Query: 61 K-RIINGDARD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 R G + L G+PI IKD TKG T A S +L+G+ Y++TV +K+ Sbjct: 61 AIRAAGGSEAEALHPLAGVPIAIKDLIVTKGQPTTAASKMLEGWMSPYDATVIEKIRAAK 120 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 MLGK N+DEFAMGSS E S YG +PW PGGS GGS+AAVA F + Sbjct: 121 LPMLGKTNLDEFAMGSSTEHSAYGVTRNPWDL-----NRIPGGSGGGSAAAVASFEAPLA 175 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDTGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA L + I Sbjct: 176 LGTDTGGSIRQPGAVTGTVGVKPTYGAVSRYGAIAMASSLDQIGPVSRTVLDSAYLQELI 235 Query: 236 AGYDECDATCVNLP------VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 G+D D+T +LP V E + G+ +G+ KE + + + + + + Sbjct: 236 GGHDPKDST--SLPKDLEGLVSAAESGAAGDLTGLRIGVVKELQGEGYQDGVQARFDESL 293 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE- 345 LK AGA+IVE+S P+ +YAL AYY+I P+E SSNLA++DGVR+G RV EG +E Sbjct: 294 ELLKAAGAQIVEVSCPNLKYALGAYYLIMPSEVSSNLAKFDGVRFGHRVLPEEGPMTIER 353 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 + +TR+ GFG EVK RI++GTY LS+ YD++Y A+K+RTLI+RDF AFEQ DV++ Sbjct: 354 VMGSTRAAGFGDEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQRDFDAAFEQ-ADVLV 412 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +PTTPT AF LG +N+ +M NDV T+ N+AG+P I+VP L E +P+G+Q + Sbjct: 413 SPTTPTVAFELGANDNDPLAM--YLNDVATIPANLAGIPGITVPGGLSE-NLPVGIQFLA 469 Query: 466 QPFREETLFSVGQIIE 481 + + L+ G +E Sbjct: 470 PAYEDARLYRAGAALE 485 >gi|222100274|ref|YP_002534842.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Thermotoga neapolitana DSM 4359] gi|221572664|gb|ACM23476.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Thermotoga neapolitana DSM 4359] Length = 490 Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 185/414 (44%), Positives = 279/414 (67%), Gaps = 11/414 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+ IKD T G+ T S IL+ + +++TV +K+ + G V++GK N+DEFAMGSS Sbjct: 75 GIPVAIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSS 134 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + P +PW + PGGSSGGS+AAVA + A++G+DTGGS+RQPAS G Sbjct: 135 TERSAFFPTRNPWDL-----ERVPGGSSGGSAAAVASGMVVAALGSDTGGSVRQPASLCG 189 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPTYG SR G+++FA SLDQ G IT+TV+D+AIL++ I+G DE DAT ++ V D Sbjct: 190 VVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVKDAAILMEIISGKDENDATTMDRKV-D 248 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++ + GM +P+E + + + +++ + L+ GAK+ ++S+PH +Y++ Sbjct: 249 FLSEIENGVAGMRFAVPQEIYEHKIEDGVAERFEESLKLLEKLGAKVEKVSIPHMKYSVA 308 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+PAEASSNLAR+DGV+YGLRV+ K + EMY TR++GFG+EV+ RIMIGT+ LS+ Sbjct: 309 VYYVIAPAEASSNLARFDGVKYGLRVKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSA 368 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 Y++++ +A K+R I + E Q D ILTPT+P +AF +G+ ++ + + D Sbjct: 369 AYYEAYFNKAMKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIKD---PLTYYLMD 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +FT+ N+AGLPAISVP +P+G+Q+IG+ F + +F + + IEK + Y Sbjct: 425 IFTIPANLAGLPAISVPFGFS-NNLPVGVQVIGRRFADGKVFRIARAIEKNSPY 477 >gi|227875701|ref|ZP_03993829.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus mulieris ATCC 35243] gi|227843643|gb|EEJ53824.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mobiluncus mulieris ATCC 35243] Length = 513 Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 210/493 (42%), Positives = 306/493 (62%), Gaps = 19/493 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E ++LR+ + ++ ELV +++ I+N + ++A++ V A A + D Sbjct: 3 SELYLQSATELAEKLRAGETTSEELVKIFLERIKNLDGTIHAFLFVDEAGALETARQVDA 62 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G+PI IKD T+G T S IL+G+ P Y++TV KL + G +LG Sbjct: 63 DRAAGKELPPYAGVPIAIKDNLVTRGRPTTCGSKILEGWLPPYDATVVLKLREAGLPVLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YG +PW + PGGS GGS+AAVA +L ++G+DT Sbjct: 123 KTNMDEFAMGSSTEHSAYGLTRNPWDL-----ERIPGGSGGGSAAAVAAYLAPWALGSDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQP + TGTVG KPTYG SR G+++ A SLDQ G +TR V D+A L IAG+D Sbjct: 178 GGSIRQPGAVTGTVGSKPTYGAVSRYGLVAMASSLDQIGPVTRCVSDAAALHTIIAGHDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQG-----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT ++ PVPD A+ + + + VG+ K+ + + + + + + L+ A Sbjct: 238 LDATSLDEPVPDLSTAVTEVVANPNTTKLRVGVVKQISGEGFQAGVRQRFDEAVERLRAA 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTR 351 GA IVE+ P +Y+L AYY+I PAE SSNLAR+DGVRYGLRV G E M TR Sbjct: 298 GASIVEVDCPSFEYSLAAYYLIMPAEVSSNLARFDGVRYGLRVLPESGPVTAETMMAATR 357 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GT+VLS+ +D++Y A+K+RTL++R+ AFEQ DV+++PT PT Sbjct: 358 EAGFGPEVKRRIILGTHVLSAGYFDAYYGSAQKVRTLVQRNLAAAFEQ-CDVLISPTAPT 416 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF G + ++ M NDV T+ NMAG+PAISVP + E +P+G+Q++ + Sbjct: 417 TAFKFGDKLDD--PMAMYLNDVATIPANMAGIPAISVPGGVAPEDGLPVGIQILAPARGD 474 Query: 471 ETLFSVGQIIEKE 483 +T+++ ++E + Sbjct: 475 KTMYAAAALVEAQ 487 >gi|229493364|ref|ZP_04387153.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus erythropolis SK121] gi|229319680|gb|EEN85512.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus erythropolis SK121] Length = 492 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 206/494 (41%), Positives = 311/494 (62%), Gaps = 17/494 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E ++ S+++S+VE+ +++ I +++ +A++ V ++A AA D Sbjct: 1 MTDLTTLDAAELAGKIHSREVSSVEVTQAHLDRIAAVDTEYHAFLHVAGEQALEAAAAVD 60 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + G+ A L G+PI +KD F T + T S IL+G+ Y++T+T KL G + Sbjct: 61 NSLARGNEPASALAGVPIALKDIFTTTDMPTTCASKILEGWVAPYDATLTSKLRAAGIPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFAMGSS E S +GP +PW D T PGGS GGS+AA+A +IGT Sbjct: 121 LGKTNLDEFAMGSSTENSAFGPTRNPW---DVTR--IPGGSGGGSAAALASRQAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+ Sbjct: 176 DTGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVIAGH 235 Query: 239 DECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T ++ PV A + ++G+ VG+ KE D P + ++ + LK Sbjct: 236 DPRDSTSIDAPVRPVVAAAREGAAGDLRGVKVGVVKELHSDSYQPGVIASFDAAVEQLKA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRS 352 GA++VE+S P ++AL +YY++ P+E SSNLAR+D +RYGLRV+ ++ ++ TR+ Sbjct: 296 LGAEVVEVSCPSFEHALASYYLVLPSEVSSNLARFDAMRYGLRVDDGNMSADQVMAATRA 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTY LSS YD++Y A K+RTLI RDF +A+E+ VDV+++PT+P + Sbjct: 356 AGFGPEVKRRIMIGTYALSSGYYDAYYGSALKVRTLIARDFDKAYEK-VDVLVSPTSPFT 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 + LG++ + +M +D+ T+ N+AG A+SVP+ L + +P+GLQ++ +E Sbjct: 415 PWKLGEKVGDPLAM--YLSDLCTLPTNLAGHCAMSVPSGLSADDNLPVGLQIMAPAMADE 472 Query: 472 TLFSVGQIIEKEAG 485 L+ VG E G Sbjct: 473 RLYRVGAAYEAARG 486 >gi|149925923|ref|ZP_01914186.1| glutamyl-tRNA amidotransferase subunit A [Limnobacter sp. MED105] gi|149825211|gb|EDM84422.1| glutamyl-tRNA amidotransferase subunit A [Limnobacter sp. MED105] Length = 498 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 207/488 (42%), Positives = 295/488 (60%), Gaps = 25/488 (5%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 ++S R L + SA EL ++ S++NA+++V A+ +D R+ Sbjct: 4 KLQSISTLRTLLDERKASATELAQEALRE-AGQQSRLNAFVDVRDDLTLEQAKAADARLA 62 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L GIP KD F TKG + A S +L G++ +++ V +L G V +GKLN Sbjct: 63 AGETGALLGIPTAHKDIFVTKGWTSTAGSKMLAGYQSPFDAEVVSRLNAAGTVSIGKLNC 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSSNE S YGP ++PW ++ SSGGS+ AVA + S GTDTGGSI Sbjct: 123 DEFAMGSSNEKSAYGPCLNPWDTLAVPGG-----SSGGSAVAVAAGVVPFSTGTDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPAS G GIKPTYG CSR G+I++A SLDQAG + + RD A++L A+ G+D D+T Sbjct: 178 RQPASLCGITGIKPTYGSCSRFGMIAYASSLDQAGPMAHSARDCALVLNAMVGFDAKDST 237 Query: 245 CVNLPV------PDYERALDQSIQ---------GMTVGIPKEYRLDYLSPTIDKTWQQGI 289 V P D+ + ++ G+ VG+P E+ + L+P + + Sbjct: 238 SVQRPAVSQGVNEDFTVGFGKPLRTGDAAKPLAGVRVGLPTEFFGEGLAPDVRAPIDAAL 297 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYE 348 L+ GA +V ISLP T+ ++PAYY+I+PAEASSNL+R+DGVRYG R + D+ MYE Sbjct: 298 KQLESMGATLVTISLPRTELSIPAYYVIAPAEASSNLSRFDGVRYGHRAADYTDLKSMYE 357 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N+RS GFG EV+ RIM+G YVLS YD++YL+A+KIR LI +DF AF+Q D I P Sbjct: 358 NSRSEGFGLEVQRRIMVGAYVLSHGYYDAYYLQAQKIRRLIAQDFQAAFQQ-CDFIAGPV 416 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 +PT A+ LG++ + M D++T++ ++AGLP +SVP +K P+G+QLIG F Sbjct: 417 SPTVAWNLGEKSADPVQM--YLADIYTLSTSLAGLPGMSVPVGFGDKNRPVGMQLIGNYF 474 Query: 469 REETLFSV 476 +E L ++ Sbjct: 475 KEGELLAL 482 >gi|297818082|ref|XP_002876924.1| hypothetical protein ARALYDRAFT_484328 [Arabidopsis lyrata subsp. lyrata] gi|297322762|gb|EFH53183.1| hypothetical protein ARALYDRAFT_484328 [Arabidopsis lyrata subsp. lyrata] Length = 534 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 203/482 (42%), Positives = 308/482 (63%), Gaps = 20/482 (4%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD- 70 +R L S + +AVE+ SY+ I + Q+ ++ V ++ A+E D+RI G+ Sbjct: 46 TRRSLLSGETTAVEIAKSYLSRIRLTEPQLKCFLHV-SENVLKDAQEIDQRIAKGEELGP 104 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ IG+KD T+G+ + A S IL+ +RP +++T +K+ + G +++GK NMDEF MG Sbjct: 105 LAGVLIGVKDNICTQGMPSTAASRILEHYRPPFDATAVRKIKELGGIVVGKTNMDEFGMG 164 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ E S + ++PW D + PGGSSGGS+AAVA C S+G+DTGGS+RQPASF Sbjct: 165 STTEASAFQVTVNPW---DLSR--VPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASF 219 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G++++A SLD G TV D+ +LL AI+GYD D+T V Sbjct: 220 CGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDV 279 Query: 251 PDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+++ + + G+ VGI +E D + + Q+ S L+ G + E+S Sbjct: 280 PEFQSQFLSMDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCVLTEVS 339 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP LPAYY+I+ +E+SSNL+RYDGVRYG +V +++ ++YE +R GFG EVK RI Sbjct: 340 LPSFSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRI 399 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GTY LS+ YD++Y RA+++RTLI++DF A EQ D++++P P++A+ +G+++++ Sbjct: 400 LMGTYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQN-DILISPAAPSAAYKIGEKKDDP 458 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQII 480 +M D+ TV VN+AGLPA+ +P L E +P+GLQ+IG F EE L VG I Sbjct: 459 LAM--YAGDIMTVNVNLAGLPAMVLPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKVGHIF 516 Query: 481 EK 482 E+ Sbjct: 517 EQ 518 >gi|226305871|ref|YP_002765831.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodococcus erythropolis PR4] gi|259647221|sp|C0ZXK7|GATA_RHOE4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|226184988|dbj|BAH33092.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodococcus erythropolis PR4] Length = 492 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 206/494 (41%), Positives = 311/494 (62%), Gaps = 17/494 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E ++ S+++S+VE+ +++ I +++ +A++ V ++A AA D Sbjct: 1 MTDLTTLDAAELAGKIHSREVSSVEVTQAHLDRIAAVDTEYHAFLHVAGEQALEAAAAVD 60 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + G+ A L G+PI +KD F T + T S IL+G+ Y++T+T KL G + Sbjct: 61 NSLAGGNEPASALAGVPIALKDIFTTTDMPTTCASKILEGWVAPYDATLTSKLRAAGIPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFAMGSS E S +GP +PW D T PGGS GGS+AA+A +IGT Sbjct: 121 LGKTNLDEFAMGSSTENSAFGPTRNPW---DVTR--IPGGSGGGSAAALASRQAPLAIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ T TVG KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+ Sbjct: 176 DTGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVIAGH 235 Query: 239 DECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T ++ PV A + ++G+ VG+ KE D P + ++ + LK Sbjct: 236 DPRDSTSIDAPVRPVVAAAREGAAGDLRGVKVGVVKELHSDSYQPGVIASFDAAVEQLKA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRS 352 GA++VE+S P ++AL +YY++ P+E SSNLAR+D +RYGLRV+ ++ ++ TR+ Sbjct: 296 LGAEVVEVSCPSFEHALASYYLVLPSEVSSNLARFDAMRYGLRVDEGNMSADQVMAATRA 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTY LSS YD++Y A K+RTLI RDF +A+E+ VDV+++PT+P + Sbjct: 356 AGFGPEVKRRIMIGTYALSSGYYDAYYGSALKVRTLIARDFDKAYEK-VDVLVSPTSPFT 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 + LG++ + +M +D+ T+ N+AG A+SVP+ L + +P+GLQ++ +E Sbjct: 415 PWKLGEKVGDPLAM--YLSDLCTLPTNLAGHCAMSVPSGLSADDNLPVGLQIMAPAMADE 472 Query: 472 TLFSVGQIIEKEAG 485 L+ VG E G Sbjct: 473 RLYRVGAAYEAARG 486 >gi|121603088|ref|YP_980417.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Polaromonas naphthalenivorans CJ2] gi|120592057|gb|ABM35496.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Polaromonas naphthalenivorans CJ2] Length = 510 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 211/487 (43%), Positives = 306/487 (62%), Gaps = 24/487 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V++ +L + DIS+VE+ ++ I ++ + A++ + A + A A +D R Sbjct: 12 DLHDLGVAQLAAKLAAGDISSVEVTQHFLNRI-GQHAGLGAFLALDADVSLAQARAADAR 70 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW----DNGAVM 118 + G+ L G+P+ KD F T+ T A S +L +R +++TV +L G V Sbjct: 71 LAAGERTPLLGVPLAHKDVFVTRDFPTTAGSKMLANYRSPFDATVVSRLGVGPGGAGMVT 130 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGKLN DEFAMGS NE S Y V +PW + PGGSSGGS+AAVA L A+ GT Sbjct: 131 LGKLNCDEFAMGSGNENSAYQKVQNPWDT-----SRVPGGSSGGSAAAVAARLVPAATGT 185 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPAS TG GIKPTYGRCSR G+++FA SLDQAG + R+ D A+LL A+AG Sbjct: 186 DTGGSIRQPASLTGITGIKPTYGRCSRYGMVAFASSLDQAGPMARSALDCALLLSAMAGP 245 Query: 239 D-ECDATCVNLPVPDYERAL---------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 D + D+T +++P DY L + ++G+ +G+P ++ +P + + Sbjct: 246 DPDRDSTSLDMPAVDYATDLIAARTDGTSAKPLKGLRIGLPTQFFGAGCAPDVLAAVRGA 305 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMY 347 +S + GA +V++SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R D+ +MY Sbjct: 306 LSEFEKLGATLVDVSLPLTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAHYTDLTDMY 365 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + +RS GFG E RIMIGTYVLS YD++YL+A+KIR LI +DF AF Q DVI P Sbjct: 366 KKSRSEGFGDEATRRIMIGTYVLSHGYYDAYYLKAQKIRRLIAQDFQTAFAQ-CDVIAGP 424 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +PT A+ +G++ ++ + D++T++ ++AGLP +SVPA MP+GLQLIG Sbjct: 425 VSPTVAWKIGEKSDD--PVASYLADIYTLSSSLAGLPGMSVPAGFGAGGMPVGLQLIGNY 482 Query: 468 FREETLF 474 F+E L Sbjct: 483 FKEAQLL 489 >gi|320094062|ref|ZP_08025880.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Actinomyces sp. oral taxon 178 str. F0338] gi|319979003|gb|EFW10528.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Actinomyces sp. oral taxon 178 str. F0338] Length = 502 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 204/491 (41%), Positives = 306/491 (62%), Gaps = 18/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + E D L + I++VEL + + IE + ++ A++ V + A A A + D Sbjct: 2 MNDLLRKSALELADMLAAGRITSVELTTACLDRIEAVDPRVRAFLHVDREGALATAADVD 61 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G D L G+PI +KD T+G+ T S IL +RP Y++TVT+K+ + ++ Sbjct: 62 ARRAAGEDLHRLAGVPIALKDNLVTRGVPTTCASRILGDWRPPYDATVTRKIKEARLPIV 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +G +PW + PGGS GGS+AAVA ++ ++G+D Sbjct: 122 GKTNMDEFAMGSSTEHSAFGATRNPWDL-----ERIPGGSGGGSAAAVAAYMVPLALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP TGTVG KPTYG SR G+I+ A SLDQ G +TRTV D+A L + + G+D Sbjct: 177 TGGSIRQPGFVTGTVGAKPTYGAVSRYGLIAMASSLDQIGPVTRTVADAAALTELVGGFD 236 Query: 240 ECDATCVNLPVPDYERALDQ-----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+T ++ PVP A+ S++G+ +G+ KE D + + + L+ Sbjct: 237 PADSTSLDEPVPALTGAVRSVAGQGSVEGLKIGVVKELSGDGYEKDVINAFNATVEQLRG 296 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA++VE+S P+ +YAL AYY+I PAE SSNLAR+DG+RYG+RVE + + T Sbjct: 297 TGAEVVEVSCPNLEYALAAYYLIMPAEVSSNLARFDGMRYGIRVEPTEGPVTAERVMAAT 356 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GT+VLS+ YD++Y A+K+RTL++RDF FE+ VDV+++PT P Sbjct: 357 RGAGFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLVQRDFDAVFER-VDVLVSPTAP 415 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+AF G++ ++ M NDV T+ N+AG+PA++VP + + +P+G+Q++ + Sbjct: 416 TTAFKFGEKTDD--PMAMYLNDVATIPANLAGIPAMNVPNGVSGEGLPIGIQVLAPARGD 473 Query: 471 ETLFSVGQIIE 481 ++ +IE Sbjct: 474 LKMYEAASLIE 484 >gi|260808698|ref|XP_002599144.1| hypothetical protein BRAFLDRAFT_225128 [Branchiostoma floridae] gi|229284420|gb|EEN55156.1| hypothetical protein BRAFLDRAFT_225128 [Branchiostoma floridae] Length = 412 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 186/410 (45%), Positives = 256/410 (62%), Gaps = 22/410 (5%) Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR--------SMDS 150 + P Y +T+ Q+L D GAV+LGK NMDEFAMG + S GPV +PWR DS Sbjct: 1 YVPPYNATMVQRLVDRGAVLLGKTNMDEFAMGCGSVDSIAGPVRNPWRYNFKSRHQEQDS 60 Query: 151 -------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 +D F GGSSGGS+ AVA +C ++G+DTGGS+R PAS+ G VG+KPTYG Sbjct: 61 QPIRDSHSDWFITGGSSGGSAVAVAAGICKGALGSDTGGSVRNPASYCGVVGLKPTYGLL 120 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 SR G+I SLD GI TR V D+AI+L A+AG+D D+T V+ + D I Sbjct: 121 SRHGLIPLVNSLDVPGIFTRCVDDAAIMLGALAGHDPKDSTTVSDTFQPFSLPEDIDITR 180 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 + VGIPKEY +LS TWQ+ L+DAGA++ ++SLPHT Y++ Y ++ AE + Sbjct: 181 LHVGIPKEYHAPHLSAETLNTWQRAADLLEDAGARVSQVSLPHTPYSIVCYSVLCAAEVA 240 Query: 324 SNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 SN+ARYDG+ +G R E +Y TR GF V+ RI+ G Y L R YD ++++A Sbjct: 241 SNMARYDGLEFGHRGSDHSSTEALYAQTRHEGFNDVVRGRILAGNYFLLKRHYDHYFIQA 300 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTT--PTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 ++IR LI DF + FE GVD++LTPTT P ++ +E+N DVFT VN+ Sbjct: 301 QRIRRLIANDFRKVFEGGVDILLTPTTLSPARSYRWFVQEDNRTRTEQ--EDVFTQPVNL 358 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 AG+PA++VP AL E +P+GLQLIGQ F+E+TL +V + +E++ + PH Sbjct: 359 AGIPAVNVPVALSEDGLPIGLQLIGQSFQEKTLLTVAKWLEQQVNF--PH 406 >gi|242074536|ref|XP_002447204.1| hypothetical protein SORBIDRAFT_06g030390 [Sorghum bicolor] gi|241938387|gb|EES11532.1| hypothetical protein SORBIDRAFT_06g030390 [Sorghum bicolor] Length = 541 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 195/483 (40%), Positives = 300/483 (62%), Gaps = 21/483 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD---AR 69 R+ L S + +A ++ Y+ + + + ++I V A AEE D+RI +G+ Sbjct: 52 RESLLSGERTAADITSEYLSRLRRTEPSLRSFIHVADAAAEREAEELDRRIASGEKDAVG 111 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ +G+KD T + + S ILDG+RP Y++T ++L + GA+++GK N+DEF M Sbjct: 112 PLAGVLVGVKDNLCTANMPSTGGSRILDGYRPAYDATAVRRLQEAGAIVVGKTNLDEFGM 171 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ E S + +PW D PGGSSGGS++AV+ C S+G+DTGGS+RQPAS Sbjct: 172 GSTTEGSAFQVTTNPW-----DDSRVPGGSSGGSASAVSARQCVVSLGSDTGGSVRQPAS 226 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYGR SR G++++A SLD G +V D+A +L +AG+D+ D+T + Sbjct: 227 FCGVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVFDTATILSVVAGHDKMDSTSSSQV 286 Query: 250 VPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 VPDY L + + G+ +GI +E + ++ + + + S L+ G+ + E+ Sbjct: 287 VPDYASELVSLDLLESKPLAGLRIGIIQETLGEGVANGVISSIKGAASHLEQLGSVVEEV 346 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SLP LPAYYI++ +EASSNL+RYDG+RYG + D+ E+Y +R+ G G EVK R Sbjct: 347 SLPSFSLGLPAYYILASSEASSNLSRYDGIRYGRQFSADDLNELYGESRANGLGHEVKMR 406 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ YD++Y RA+++RTL+K F +A E+ D++++P P++A+ +G++ N+ Sbjct: 407 ILMGTYALSAGYYDAYYKRAQQVRTLVKESFKDALER-YDILISPAAPSAAYKIGEKIND 465 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQI 479 +M D+ TV VN+AGLPA+ VP E +P+GLQLIG PF E L VG I Sbjct: 466 PLAM--YAGDILTVNVNLAGLPALVVPCGFVEGGPAGLPVGLQLIGSPFCEGNLLRVGHI 523 Query: 480 IEK 482 E+ Sbjct: 524 FEQ 526 >gi|332184807|gb|AEE27061.1| Aspartyl-tRNA(Asn) amidotransferase subunit A /Glutamyl-tRNA(Gln) amidotransferase subunit A [Francisella cf. novicida 3523] Length = 481 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 207/466 (44%), Positives = 282/466 (60%), Gaps = 12/466 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R RL S +ISAVEL Y+ I+ + +N+ I + +A AE +D I G Sbjct: 4 IKKLRARLDSGEISAVELTKQYLAKIKEQDKSINSVITLCEAEALKEAEAADSIISQGKQ 63 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI KD F TKGI T A S +LD F Y+STVT+ D G V LGKLNMDEFA Sbjct: 64 GLLTGIPILHKDLFCTKGIRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA 123 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+NE SYYG V +PW + PGGSSGGS+AAVA S G+DTGGS+RQPA Sbjct: 124 MGSTNEHSYYGAVSNPWDL-----ERVPGGSSGGSAAAVAAGFAPVSTGSDTGGSVRQPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G +KPTYG SR G+++FA S DQAGI D AI+L A+AG E D+TCV + Sbjct: 179 SFCGLTAMKPTYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAVAGECEFDSTCVGV 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + +++ I G +G+ + D L I + + + GAKI + +P + Sbjct: 239 KQNHFTQDIEKDISGKVIGVDESLIKD-LPEQIQQAVATTLKNFEKLGAKIKSVKVPDLK 297 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AL YYII+PAEA++NLARYDGVRYG R E +D+ E+Y +R+ GFG EVK RIMIG Sbjct: 298 EALSTYYIITPAEAAANLARYDGVRYGYRNPEARDLDELYRKSRTDGFGAEVKRRIMIGN 357 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVL+S YDS+Y +A+++R ++ E F Q VD I P +P+ AF G + + + Sbjct: 358 YVLASSQYDSYYNKAQQLRKVMTDQINEIFTQ-VDAIFMPASPSEAFKKGDKLD---PVS 413 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +D++T+ N++GLPAI+ P +P+G QL+ + F + L Sbjct: 414 AYLSDIYTIPANISGLPAIAFPIGFAN-ALPVGGQLMAKAFNDNIL 458 >gi|156551449|ref|XP_001604590.1| PREDICTED: similar to GA19290-PA [Nasonia vitripennis] Length = 523 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 190/474 (40%), Positives = 272/474 (57%), Gaps = 26/474 (5%) Query: 41 MNAYIEVVAQKARAAAEESDKR-IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA+I V ++ A+ A+ESD+R N +L+G+PI +KD F TK T S +L F Sbjct: 40 LNAFITVTSELAQQQAQESDERQKKNALLGELDGVPIAVKDNFCTKDQPTTCASRMLADF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF----- 154 P Y++TV +KL D GAV++GK N+D+FAMG+ SYYGP + W S + F Sbjct: 100 VPGYDATVYKKLKDAGAVLIGKTNLDQFAMGAGTVDSYYGPSKNLWGSELMKNYFLDDYF 159 Query: 155 -------------------TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 GGSSGGS+ AV+ C A++G+D+GGS R PAS+ G VG Sbjct: 160 HDQEMQYDDEALSKTENWHIAGGSSGGSAIAVSTGTCFAALGSDSGGSTRNPASYCGIVG 219 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I S+D GI+TRTV D+ +L AIAG DE D+T + P + Sbjct: 220 LKPTYGLVSRHGLIPLVNSMDVPGILTRTVDDAITVLNAIAGPDESDSTSIKDPYIPFAL 279 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + G+ +G+PKEYR LS +D W + L++AGA++ +S+PHT+Y++ Y Sbjct: 280 PSPVDVSGLRIGLPKEYRCSALSEEVDSNWSEVSQLLQEAGARVFPVSMPHTEYSIVCYS 339 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ E +SN+ARYDG+ YG R E E+Y +RS GF V+ RI+ G Y L + Sbjct: 340 VLNQCEVASNMARYDGLEYGYRADENSSTEELYAQSRSKGFNDVVRSRILAGNYFLLTEN 399 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 Y+ +++RA K+R+LI DF + + G+DVILTPTT + A + D Sbjct: 400 YEDYFVRAMKVRSLIAEDFEKVWHDGIDVILTPTTLSDAPRYHDFISADNQSQCSVQDFC 459 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T NMAG+PA+S+P L +K MPL LQL+ EE L V + IE + R Sbjct: 460 TQPANMAGVPAVSIPIKLSKKGMPLSLQLMAPKLCEERLLGVAKWIEDVVKFPR 513 >gi|321468002|gb|EFX78989.1| hypothetical protein DAPPUDRAFT_188353 [Daphnia pulex] Length = 501 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 186/476 (39%), Positives = 270/476 (56%), Gaps = 35/476 (7%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +NAYI V + ++ +ES R + G R +EGIPI IKD F TK I T S +L+ F Sbjct: 29 LNAYIRVTDEVSQVQLQESTTRYLKGTTRLMEGIPIAIKDNFCTKNITTTCASKMLENFV 88 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS------------- 147 P Y +TV ++L D+GA+++GK N+DEF MGS S +GP + W S Sbjct: 89 PTYNATVVERLLDSGAILMGKTNLDEFGMGSGTTESIFGPTKNIWGSNLISKANDIDNKV 148 Query: 148 --MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 S D F GGSSGGS+ AVA C+ ++G+DTGGS+R PAS+ G VG KP+YG SR Sbjct: 149 SGSQSDDFFIAGGSSGGSAVAVAAGSCSVALGSDTGGSVRNPASYCGVVGFKPSYGSISR 208 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD------- 258 G+I S+D GI+ RT+ D + + I G D D+T + +R L+ Sbjct: 209 YGLIPLVNSMDVPGILARTIGDCRSVFEVIKGCDPKDSTTL-------QRTLNKSKTKRS 261 Query: 259 -QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + VGIPKE+ LS + W+ L+++G +++++SLPHT Y++ Y ++ Sbjct: 262 SSKFDKLCVGIPKEFYCPGLSSEVIDAWKDVADLLENSGFRVIQVSLPHTSYSIACYSVL 321 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDI---LEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +P E +SN+ARYDG+RYG R GKD+ +Y RS Q V+ RI+ G Y L Sbjct: 322 NPCEVASNMARYDGLRYGYRATGKDLNSTESLYAANRSHALNQIVRGRILAGNYFLLKEN 381 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN-DV 433 YD ++++A K+R LI D+ + + GVD++LTP T + A PL E S + D Sbjct: 382 YDKYFVQALKLRRLIYDDYVKMWSTGVDILLTPVTLSDA-PLFSEFTEKDSRAQSADQDY 440 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 T NMAG+PA+S+P L ++ +PL LQL+ F +ETL V ++EKE + P Sbjct: 441 CTQPANMAGIPALSLPVRLSKRNLPLSLQLMAPHFDDETLLDVAHLLEKELNFPHP 496 >gi|330818667|ref|YP_004362372.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia gladioli BSR3] gi|327371060|gb|AEA62416.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia gladioli BSR3] Length = 496 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 209/489 (42%), Positives = 302/489 (61%), Gaps = 23/489 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L + SAVEL Y+Q I+ + ++NA++ V A A +D G Sbjct: 5 SLTELRAALDAGQTSAVELAQLYLQRIDAAR-ELNAFVHVDPDLTLAQARAADAARAAGT 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F T+G + A S +L + +++TV ++L G V LGK NMDEF Sbjct: 64 AGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYTSPFDATVVERLAAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW ++ SSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDTLAVPGG-----SSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+D D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCALLLDAMAGFDARDSTSLE 238 Query: 248 LPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + R L Q+ ++G+ +G+P EY + L+ + + + GA Sbjct: 239 RDDEQFGRHLGQAWTPEAPAGRPLEGLRIGLPNEYFGEGLAADVRAAIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R + D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAQYGDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTYVLS YD++YL+A+KIR +I +DF AFEQ DVI+ P +P+ A+ L Sbjct: 359 PEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQNAFEQ-CDVIMGPASPSVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 GAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANARRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEK 482 V ++ Sbjct: 476 LQVADAFQR 484 >gi|72161010|ref|YP_288667.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermobifida fusca YX] gi|109891997|sp|Q47SC3|GATA_THEFY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|71914742|gb|AAZ54644.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Thermobifida fusca YX] Length = 498 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 225/488 (46%), Positives = 306/488 (62%), Gaps = 16/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ +E + S + SAVE +Y+ I + Q++A++ V A KA A D Sbjct: 1 MTELLKLSAAELGAAIASGETSAVEATQAYLDRIAEVDGQIHAFLHVAADKALEQARAVD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L G+P+ KD F TK + T A S IL+G++ Y++TVT++L D G V+L Sbjct: 61 ARRAAGEKLGPLAGVPVAHKDVFTTKDMPTTAASKILEGWQSPYDATVTERLRDAGLVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S YGP +PW TD+ PGGSSGGSSAAVA F + GTD Sbjct: 121 GKTNLDEFAMGSSTENSAYGPTRNPW----DTDR-VPGGSSGGSSAAVAAFEAPLATGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ G VG KPTYG SR G+I+FA SLD G I R V D+A+L +A +G+D Sbjct: 176 TGGSIRQPAAVCGLVGAKPTYGTSSRYGLIAFASSLDTPGPIARNVLDAALLHEAFSGHD 235 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T VN PVP E A + GM +G+ KE + P + + + + + + GAK Sbjct: 236 PRDSTSVNEPVPPVVEAARRADVSGMRIGVVKELSGEGYQPGVMQRFTEAVELFESLGAK 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIG 354 IVE+S P AL AYY+I+P+E SSNLAR+D +RYGLRV G D E+ TR+ G Sbjct: 296 IVEVSCPSFTAALAAYYLIAPSECSSNLARFDAMRYGLRV-GDDGTRSADEVMALTRAQG 354 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTY LSS YD++Y A+K+RTLIKRDF AF+Q DV+++PTTPT+AF Sbjct: 355 FGPEVKRRIILGTYALSSGYYDAYYGSAQKVRTLIKRDFEAAFQQ-ADVLVSPTTPTTAF 413 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETL 473 LG+ ++ M D+ T+ N+AG A+SVP L E MP+GL ++ ++ Sbjct: 414 RLGERIDD--PMAMYLADLCTIPTNLAGNAALSVPCGLAPEDNMPVGLHIMAPTLADDRA 471 Query: 474 FSVGQIIE 481 + G +E Sbjct: 472 YQAGAAVE 479 >gi|320450505|ref|YP_004202601.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus scotoductus SA-01] gi|320150674|gb|ADW22052.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Thermus scotoductus SA-01] Length = 471 Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 199/479 (41%), Positives = 293/479 (61%), Gaps = 26/479 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRI 63 M E R ++ ++S +E+ Y++ I + + + A++ V V ++AR+ D + Sbjct: 1 MLAHEIRAKVAQGEVSPLEVAQVYLERIRSLDPSLGAFLTVNEGVLEEARSL----DPTL 56 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 L G+ + +KD TKGI T A S +L+GF P YE+T +L GA+++GK N Sbjct: 57 ------PLAGLVVAVKDNIVTKGIPTTAGSRLLEGFLPPYEATAVARLKALGALVIGKTN 110 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +DEF MGSS E S + P +P+ D T PGGSSGGS+ AVA L ++G+DTGGS Sbjct: 111 LDEFGMGSSTEHSAFFPSRNPF---DPTR--VPGGSSGGSAVAVAADLAPLALGSDTGGS 165 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQPA+F G G+KPTYGR SR G+I++A SLDQ G + R+VRD A+L+ AI+G D DA Sbjct: 166 VRQPAAFCGIYGLKPTYGRVSRYGLIAYASSLDQIGPMARSVRDLALLMDAISGPDPLDA 225 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++L P ++ AL + + + +G+ +E L SP ++ +Q + + G ++ E+S Sbjct: 226 TSLDLK-PRFQEALAELLPSLRLGVVRE-ALSGNSPGVEGALRQALEVFRGLGLQVKEVS 283 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P AL AYYI++PAEASSNLARYDG +G R EG+++ + E TR+ FG EVK RI Sbjct: 284 WPSLPLALNAYYILAPAEASSNLARYDGTLFGYRAEGEELWRVLEETRA-RFGLEVKRRI 342 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GT+VLSS Y+++Y RA+ R +K + +A Q VD++L PTTP AFPLG + Sbjct: 343 LVGTFVLSSGYYEAYYGRAQAFRGRLKAE-AQALFQEVDLLLLPTTPHPAFPLGGRPD-- 399 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D++TV N+AGLPA+S PA E +P+GLQL R+E L E+ Sbjct: 400 -PLAMYREDLYTVGANLAGLPALSFPAGF-EDGLPVGLQLFAPWARDELLLQAALAFEE 456 >gi|206603870|gb|EDZ40350.1| Glutamyl-tRNA(Gln) amidotransferase A subunit/Amidase [Leptospirillum sp. Group II '5-way CG'] Length = 492 Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 186/473 (39%), Positives = 277/473 (58%), Gaps = 9/473 (1%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 S+ S E +++ IE + + A++ V A + ++ N G P+ Sbjct: 17 SRQFSIEEATREFLERIEREDQALGAFLSVNPNAINRARQLDNRLARNPAPSPFYGYPVA 76 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD + + T S +L FRP +TV +L + GA++LGK NMDEFAMGSS E S Sbjct: 77 IKDNLHVRDLPTTCASRMLANFRPVENATVVDRLLEAGAIVLGKTNMDEFAMGSSTENSA 136 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW + PGGSSGGS+ AVA + ++G+DTGGSIRQPA+F G +G+K Sbjct: 137 MGVTRNPWDL-----RRVPGGSSGGSAVAVAADMAPMALGSDTGGSIRQPAAFCGVLGLK 191 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYGR SR G+++F+ SLDQ G R D+ ++ ++G D D T + + R Sbjct: 192 PTYGRISRYGLVAFSSSLDQIGPFARHAEDALEMMLLLSGPDGRDMTVESRDPSEMARDF 251 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + +QG +G+P+E+ D L P + + ++ L AGA I LP QY + YYII Sbjct: 252 GRKVQGTVIGMPEEFFGDGLDPAVAGSLERAKDVLAAAGAVFRPIRLPSAQYGINVYYII 311 Query: 318 SPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + +EA+SNL+RYDGVRYG R ++ K+I ++Y +TR GFG EVK RI++GT+ LS+ D Sbjct: 312 ATSEAASNLSRYDGVRYGYRSLKAKNIRDLYTHTRQEGFGPEVKRRILLGTFALSAGYQD 371 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 +Y +A++++ LI+ +F AF + VDVI PTTPT F G E S + +D++T+ Sbjct: 372 QYYRKAQQVQALIREEFDRAFHE-VDVIFAPTTPTPPFLFG--EKVSDPLAMYLSDIYTI 428 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + N+AGLPA+S P+ + +P+G QLIG + E L + I+E+ G RP Sbjct: 429 SANLAGLPALSAPSWPTPEGLPVGAQLIGPAWSEGRLLRLAAILEEGVGIHRP 481 >gi|258544096|ref|ZP_05704330.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Cardiobacterium hominis ATCC 15826] gi|258520649|gb|EEV89508.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Cardiobacterium hominis ATCC 15826] Length = 486 Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 210/474 (44%), Positives = 299/474 (63%), Gaps = 12/474 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 RL +++ISA EL + + I N +NAYI + ARAAA+ SD R G+AR L+G Sbjct: 14 RLAAREISARELCEHTLARIAQHNPALNAYITETSDHARAAADASDARRSKGEARSPLDG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ KD F T+G+ T A S +L+ F P Y++ + + L GAVM GK++MDEFAMGSSN Sbjct: 74 IPMAHKDIFCTQGVRTTAGSKMLEHFIPSYDAGIVENLAAAGAVMTGKVSMDEFAMGSSN 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S +G V +PW+ + PGGSSG S+A VA L + G+DTGGSIRQPA++ G Sbjct: 134 ERSAFGAVKNPWQH-----EHVPGGSSGASAAVVAARLVPYATGSDTGGSIRQPAAWCGI 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 GIKPTYG SR G+I++A SLDQAG + D A++L +AG+D D+T + Sbjct: 189 TGIKPTYGTLSRWGMIAYASSLDQAGAFAVSAEDLALILNGMAGHDPRDSTSSAQTRTRF 248 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + L+Q + G+ +G+P+ Y D L+P + T + + GA +V+I L ++ A+ Sbjct: 249 DDELNQPLAGIRIGLPRNYFRD-LNPAMADTIHAAAALYEKLGATLVDIDLAYSDAAIAT 307 Query: 314 YYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEASSNL+RYDG RYG R + K + +MY +RS FG EVK RI+IGTY LS+ Sbjct: 308 YYIIASAEASSNLSRYDGARYGHRSAQAKTLQDMYRKSRSEAFGDEVKRRILIGTYALSA 367 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y +AR+ R I + AF + VDVIL PTTPT AF +G + ++ +M D Sbjct: 368 GYYDAYYEQARRARHAILNGYKAAFAE-VDVILCPTTPTPAFKIGSKIDDPVAM--FLGD 424 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ++TV+VN+AGLP +S+PA + +P+G QLIG F E L ++ ++ + Y Sbjct: 425 LYTVSVNLAGLPGLSLPAGFID-DLPVGCQLIGPHFSEPRLLNLAHQFQQASDY 477 >gi|91773613|ref|YP_566305.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanococcoides burtonii DSM 6242] gi|121684282|sp|Q12VH1|GATA_METBU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|91712628|gb|ABE52555.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Methanococcoides burtonii DSM 6242] Length = 475 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 197/483 (40%), Positives = 299/483 (61%), Gaps = 18/483 (3%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++++S+ ++++ + SA E+ SY++ I+ S+ +N Y + A A+ DK + Sbjct: 4 WLSISDVKEKIAA--TSAEEVTASYLELIDKSS--INGYT-CTSDGALDTAKMVDKGEVA 58 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G+PI IKD +TKG+ T S IL+G+ P Y++ V ++L + GAV++GK NMD Sbjct: 59 GP---LAGVPIAIKDNISTKGLATTCSSKILEGYVPPYDAHVIERLKEAGAVIIGKTNMD 115 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG+S E+S YG ++PW + PGGSSGGS+A VA S+G+DTGGS+R Sbjct: 116 EFAMGTSTESSCYGVTLNPWDH-----ERVPGGSSGGSAAVVAAGEAPISLGSDTGGSVR 170 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G VG+KPTYG SR G+IS+A SL+Q G + V D A ++ I GYD D+T Sbjct: 171 CPAAFCGVVGLKPTYGAVSRYGLISYANSLEQIGPMATCVEDIAAVMDVIGGYDARDSTS 230 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ + D++ AL ++G+ +G+P EY + + + I+ ++ A ++S+P Sbjct: 231 IDKKI-DHQAALIDDVKGLKIGVPDEYFGEGVDSGTENAVWDAINKYEEMDASWEKVSMP 289 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +T+YAL AYY I+ +EASSNLAR+DG RYG R +G++ M TR+ FG+EV+ RI++ Sbjct: 290 NTKYALAAYYTIAMSEASSNLARFDGTRYGPRNDGENWHVMASKTRAENFGKEVQRRILL 349 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ D +YL+A ++RTL+K+DF AF DV++ PT P AF +G+ + S Sbjct: 350 GTYALSAGYQDKYYLKALQVRTLVKQDFDRAFAN-FDVLMAPTMPLPAFKIGEMVEDPLS 408 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 I DV TV +N+AG+P ISVP + +P+GLQ+IG F E L EK Sbjct: 409 QYLI--DVNTVPMNLAGVPCISVPCGSSD-GLPVGLQIIGNHFDEAALIRAAYSFEKNTD 465 Query: 486 YFR 488 + + Sbjct: 466 HHK 468 >gi|15230864|ref|NP_189194.1| glutamyl-tRNA(Gln) amidotransferase, putative [Arabidopsis thaliana] gi|11994757|dbj|BAB03086.1| glutamyl tRNA amidotransferase, subunit A [Arabidopsis thaliana] gi|15010726|gb|AAK74022.1| AT3g25660/T5M7_8 [Arabidopsis thaliana] gi|23308481|gb|AAN18210.1| At3g25660/T5M7_8 [Arabidopsis thaliana] gi|110741094|dbj|BAE98641.1| putative glutamyl-tRNA amidotransferase subunit A [Arabidopsis thaliana] gi|332643527|gb|AEE77048.1| Amidase family protein [Arabidopsis thaliana] Length = 537 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 202/482 (41%), Positives = 305/482 (63%), Gaps = 20/482 (4%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD- 70 +R L S + +AVE+ SY+ I + Q+ ++ V ++ A+E D+RI G+ Sbjct: 49 TRRSLLSGETTAVEIAKSYLSRIRLTEPQLKCFLHV-SENVLKDAQEIDQRIAKGEELGP 107 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ IG+KD T+G+ + A S IL+ +RP +++T +K+ + G +++GK NMDEF MG Sbjct: 108 LAGVLIGVKDNICTQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTNMDEFGMG 167 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ E S + +PW PGGSSGGS+AAVA C S+G+DTGGS+RQPASF Sbjct: 168 STTEASAFQVTANPWDL-----SRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASF 222 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G++++A SLD G TV D+ +LL AI+GYD D+T V Sbjct: 223 CGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDV 282 Query: 251 PDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+++ + + G+ VGI +E D + + Q+ S L+ G + E+S Sbjct: 283 PEFQSQFLSVDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCILTEVS 342 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP LPAYY+I+ +E+SSNL+RYDGVRYG +V +++ ++YE +R GFG EVK RI Sbjct: 343 LPSFSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRI 402 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GTY LS+ YD++Y RA+++RTLI++DF A EQ D++++P P++A+ +G+++++ Sbjct: 403 LMGTYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQN-DILISPAAPSAAYKIGEKKDDP 461 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQII 480 +M D+ TV VN+AGLPA+ +P L E +P+GLQ+IG F EE L VG I Sbjct: 462 LAM--YAGDIMTVNVNLAGLPAMVLPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKVGHIF 519 Query: 481 EK 482 E+ Sbjct: 520 EQ 521 >gi|289522355|ref|ZP_06439209.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504191|gb|EFD25355.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 493 Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 199/472 (42%), Positives = 292/472 (61%), Gaps = 11/472 (2%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 + D + +++++ ++ IE + +NA I + ++AR+ + D + G+ L G+P Sbjct: 19 KKGDFTVSDVIETALEYIEVNERNLNALITPLYEEARSRSWMLDAALARGEELGSLFGVP 78 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD G+ T S +L+ + Y + V + L GAV++GK NMDEFAMGSS E Sbjct: 79 VVVKDNITVDGVRTTCGSRMLENWISPYSAHVVECLERAGAVIIGKANMDEFAMGSSTEF 138 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S +GP ++PW PGGSSGGS+A+VA ++G+DTGGSIRQPA+F G G Sbjct: 139 SAFGPALNPWDLSR-----VPGGSSGGSAASVAAGYAPIALGSDTGGSIRQPAAFCGVYG 193 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+I+FA SLDQ G R+++D A +L+ I+ D DATC P+Y Sbjct: 194 LKPTYGLVSRFGLIAFASSLDQIGPFARSLKDVAAILQVISEPDARDATCTRKERPNYAE 253 Query: 256 ALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-HTQYALPA 313 L+ S++G VG Y + I + Q I K++GA+IVE+ LP T+Y LP Sbjct: 254 FLNVTSLEGFKVGYLAGYESLEIDDEIKRAISQTIEICKESGAEIVEVDLPISTRYGLPC 313 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YY I+PAEASSNLAR+DGV+YG V D+ E+Y +R GFG EVK RI+IGT+VL S Sbjct: 314 YYTIAPAEASSNLARFDGVQYGFSVAADDLKELYLKSRGSGFGPEVKRRILIGTFVLGSS 373 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++YL+A+K+R LI R+F AF + DV++TP TPT P + E + + D+ Sbjct: 374 RYDAYYLQAQKVRQLIIREFNAAFSKA-DVLITPATPT--LPFKRGEKLTDPVKAYMADL 430 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 FT+ VN+AGLPA+S+ A++ + +P+G+QLIG+ F E + +IE+ G Sbjct: 431 FTIPVNLAGLPALSMRASMSQSGLPVGVQLIGKKFGEGDILKAASVIEQVVG 482 >gi|269219966|ref|ZP_06163820.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269210602|gb|EEZ76942.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 502 Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 203/500 (40%), Positives = 317/500 (63%), Gaps = 22/500 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L ++ +E +L++ ++++VEL + + I + ++ A++ V + A AAA + D Sbjct: 1 MKDLLKLSAAEMARKLQAGEVTSVELTQACLDRIHAVDERVRAFLSVDDEGALAAARDVD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G++ G+PI +KD T+G T S IL+G+ P Y++TV ++L + G ++ Sbjct: 61 ARRAAGESLHRFAGVPIAVKDNMVTRGKPTTCASKILEGWLPPYDATVVERLHEVGLPIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG +PW D+ PGGSSGGS+AAV+ F+ ++G+D Sbjct: 121 GKTNMDEFAMGSSTERSAYGETHNPW----DLDRI-PGGSSGGSAAAVSAFMVPWALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ TGTVG KPTYG SR G+++ A SLDQ G R V D+A L + + G+D Sbjct: 176 TGGSIRQPAAVTGTVGAKPTYGGVSRYGLVAMASSLDQIGPFARNVADAAALQEIVGGHD 235 Query: 240 ECDATCVNLPVPDY------ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D+T +N PVP + + + ++G+ VG+ K+ + + ++Q+ + ++ Sbjct: 236 PRDSTSLNAPVPPFEEIAAEAASSAKPLEGVRVGVVKQLGGEGCQEGVVASFQEALKTIE 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN---- 349 D GA++VE+S P +YAL AYY+I PAE SSNLAR+DG+RYG+RVE ++ E Sbjct: 296 DLGAQVVEVSCPSLEYALGAYYLIMPAEVSSNLARFDGMRYGIRVEPEEGPVTAETVMAA 355 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GFG EVK RI++GT+VLSS YD++Y A+K+RTL++RDF AF + DV+++PT+ Sbjct: 356 TRGAGFGPEVKRRIVLGTHVLSSGYYDAYYGSAQKVRTLVQRDFDAAFGE-ADVLVSPTS 414 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P +A+ LG + + +M + D+ T+ N+AG+P IS+P+ L + +P+GLQ++ Sbjct: 415 PVTAWELGSKLEDPLAMYVL--DITTIPANLAGIPGISIPSGLAD-GLPVGLQILAPAHA 471 Query: 470 EETLFSVGQIIEKEAGYFRP 489 + ++ V + EAG +P Sbjct: 472 DAQMYRVAGAV--EAGLGKP 489 >gi|11078533|gb|AAG29095.1|AF224745_1 Glu-tRNA(Gln) amidotransferase subunit A [Arabidopsis thaliana] Length = 537 Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 202/482 (41%), Positives = 304/482 (63%), Gaps = 20/482 (4%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD- 70 +R L S + +AVE+ SY+ I + Q+ ++ V ++ A+E D+RI G+ Sbjct: 49 TRRSLLSGETTAVEIAKSYLSRIRLTEPQLKCFLHV-SENVLKDAQEIDQRIAKGEELGP 107 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ IG+KD T+G+ + A S IL+ +RP +++T +K+ + G +++GK NMDEF MG Sbjct: 108 LAGVLIGVKDNICTQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTNMDEFGMG 167 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ E S + +PW PGGSSGGS+AAVA C S+G+DTGGS+RQPASF Sbjct: 168 STTEASAFQVTANPWDL-----SRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASF 222 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G++++A SLD G TV D+ +LL AI+GYD D+T V Sbjct: 223 CGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDV 282 Query: 251 PDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P++ + + G+ VGI +E D + + Q+ S L+ G + E+S Sbjct: 283 PEFRSQFLSVDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCILTEVS 342 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP LPAYY+I+ +E+SSNL+RYDGVRYG +V +++ ++YE +R GFG EVK RI Sbjct: 343 LPSFSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRI 402 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GTY LS+ YD++Y RA+++RTLI++DF A EQ D++++P P++A+ +G+++++ Sbjct: 403 LMGTYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQN-DILISPAAPSAAYKIGEKKDDP 461 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQII 480 +M D+ TV VN+AGLPA+ +P L E +P+GLQ+IG F EE L VG I Sbjct: 462 LAM--YAGDIMTVNVNLAGLPAMVLPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKVGHIF 519 Query: 481 EK 482 E+ Sbjct: 520 EQ 521 >gi|125591825|gb|EAZ32175.1| hypothetical protein OsJ_16380 [Oryza sativa Japonica Group] Length = 543 Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 197/484 (40%), Positives = 300/484 (61%), Gaps = 23/484 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-- 70 R+ L S + +A E+ Y+ + + + ++I V A AEE D+RI + D Sbjct: 54 RESLLSGERTAAEITAEYLSRLRRTEPSVRSFIHVADAAAEREAEELDRRIAT-EGLDAV 112 Query: 71 --LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+ +G+KD T + + S ILDG++P Y++T ++L + GA+++GK N+DEF Sbjct: 113 GPLAGVLVGVKDNLCTANMPSTGGSRILDGYQPAYDATAVRRLREAGAIVVGKTNLDEFG 172 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ E S + +PW D PGGSSGGS++AV+ C S+G+DTGGS+RQPA Sbjct: 173 MGSTTEGSGFQVTTNPW-----DDSRVPGGSSGGSASAVSARQCVVSLGSDTGGSVRQPA 227 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR G++++A SLD G +V D+A +L IAG+D+ D+T + Sbjct: 228 SFCGVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVVDTATILSVIAGHDKMDSTSSSH 287 Query: 249 PVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V DY+ L + + GM +GI +E + + + + + S L+ G+ + E Sbjct: 288 DVSDYKSELVPLDLLESKPLNGMRIGIIQETLGEGVETGVISSIKDAASHLEQLGSVVEE 347 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP LPAYYI++ +EASSNL+RYDG+RYG +V G D+ E+Y +R+ G G EVK Sbjct: 348 VSLPSFSLGLPAYYILASSEASSNLSRYDGIRYGRQVSGDDLNELYGGSRANGLGHEVKM 407 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTY LS+ YD++Y RA+++RTL+K+ F EA E+ D++++P P++A+ +G++ N Sbjct: 408 RILMGTYALSAGYYDAYYKRAQQVRTLVKKSFKEALER-YDILVSPAAPSAAYKIGEKIN 466 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQ 478 + +M D TV VN+AGLPA+ VP E +P+GLQ+IG PF E L +G Sbjct: 467 DPLAM--YAGDTMTVNVNLAGLPALVVPCGFVEGGSAGLPVGLQMIGSPFSEGNLLRIGH 524 Query: 479 IIEK 482 I E+ Sbjct: 525 IFEQ 528 >gi|90399278|emb|CAH68239.1| H0306F03.6 [Oryza sativa Indica Group] gi|125549946|gb|EAY95768.1| hypothetical protein OsI_17641 [Oryza sativa Indica Group] Length = 543 Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 197/484 (40%), Positives = 300/484 (61%), Gaps = 23/484 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-- 70 R+ L S + +A E+ Y+ + + + ++I V A AEE D+RI + D Sbjct: 54 RESLLSGERTAAEITAEYLSRLRRTEPSVRSFIHVADAAAEREAEELDRRIAT-EGLDAV 112 Query: 71 --LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+ +G+KD T + + S ILDG++P Y++T ++L + GA+++GK N+DEF Sbjct: 113 GPLAGVLVGVKDNLCTANMPSTGGSRILDGYQPAYDATAVRRLREAGAIVVGKTNLDEFG 172 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ E S + +PW D PGGSSGGS++AV+ C S+G+DTGGS+RQPA Sbjct: 173 MGSTTEGSGFQVTTNPW-----DDSRVPGGSSGGSASAVSARQCVVSLGSDTGGSVRQPA 227 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR G++++A SLD G +V D+A +L IAG+D+ D+T + Sbjct: 228 SFCGVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVVDTATILSVIAGHDKMDSTSSSH 287 Query: 249 PVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V DY+ L + + GM +GI +E + + + + + S L+ G+ + E Sbjct: 288 DVSDYKSELVPLDLLESKPLNGMRIGIIQETLGEGVETGVISSIKDAASHLEQLGSVVEE 347 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP LPAYYI++ +EASSNL+RYDG+RYG +V G D+ E+Y +R+ G G EVK Sbjct: 348 VSLPSFSLGLPAYYILASSEASSNLSRYDGIRYGRQVSGDDLNELYGGSRANGLGHEVKM 407 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTY LS+ YD++Y RA+++RTL+K+ F EA E+ D++++P P++A+ +G++ N Sbjct: 408 RILMGTYALSAGYYDAYYKRAQQVRTLVKKSFKEALER-YDILVSPAAPSAAYKIGEKIN 466 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQ 478 + +M D TV VN+AGLPA+ VP E +P+GLQ+IG PF E L +G Sbjct: 467 DPLAM--YAGDTMTVNVNLAGLPALVVPCGFVEGGSAGLPVGLQMIGSPFSEGNLLRIGH 524 Query: 479 IIEK 482 I E+ Sbjct: 525 IFEQ 528 >gi|291299868|ref|YP_003511146.1| glutamyl-tRNA(gln) amidotransferase subunit A [Stackebrandtia nassauensis DSM 44728] gi|290569088|gb|ADD42053.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Stackebrandtia nassauensis DSM 44728] Length = 496 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 206/490 (42%), Positives = 300/490 (61%), Gaps = 18/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ +E + + + D+++ ++ +++ IE +++A++ + A A A A D Sbjct: 1 MSDITKKTAAELGEAIAAGDLTSEQVTSAFLARIEAVEPKIHAFLHIDADGALATARAVD 60 Query: 61 KRII-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 RI G L G+PI +KD TKG+ T A S +L+G+ P Y++T+ +++ G +L Sbjct: 61 ARIAAGGKFGPLAGVPIAVKDIVVTKGLPTTAASKMLEGWIPPYDATIVERIKAAGLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S +G +PW PGGS GGS+AAVA + +IGTD Sbjct: 121 GKTNLDEFAMGSSTEYSAFGTTHNPWDL-----NRIPGGSGGGSAAAVAARMAPLAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGT+G KPTYG SR G+I+F+ SLD G +TRT+ D+A+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTIGAKPTYGGNSRYGLIAFSSSLDTPGPVTRTMLDAALLHEVIGGHD 235 Query: 240 ECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKD 294 D+T + PVP A L + G+ +GI KE+ + P + +Q G+ L Sbjct: 236 PLDSTSIPQPVPPVVEAARTGLTGDLSGVRLGIVKEFASGEGAEPGVIAAYQAGVDALVK 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR 351 GA++ E+S PH YALPAYY+ISP+E SSNLARYD VRYGLRV + + E+ TR Sbjct: 296 LGAEVEEVSCPHFTYALPAYYLISPSECSSNLARYDSVRYGLRVGDNGERSLEEVMAATR 355 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 GFG EVK RI++GTY LS+ D Y +A+K+RTLI RDF AF + VD +++PTTP Sbjct: 356 EAGFGPEVKRRIILGTYALSAGYVDQFYGQAQKVRTLITRDFDAAFAK-VDALVSPTTPF 414 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +AF G + M D++T+ N++G PAISVP+ L + +P GLQ++ R++ Sbjct: 415 TAFEFGARTADPYQM--YLADLYTIPSNLSGGPAISVPSGLSD-GLPAGLQIMAPTMRDD 471 Query: 472 TLFSVGQIIE 481 + VG +E Sbjct: 472 IAYRVGAALE 481 >gi|15806856|ref|NP_295579.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Deinococcus radiodurans R1] gi|39931640|sp|Q9RTA9|GATA_DEIRA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|6459633|gb|AAF11407.1|AE002025_6 glutamyl-tRNA(Gln) amidotransferase, subunit A [Deinococcus radiodurans R1] Length = 482 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 193/434 (44%), Positives = 266/434 (61%), Gaps = 14/434 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +NA + + + AA R+ G+ L G+PI +KD G T S +L + Sbjct: 38 LNALVSLNSHAEEQAAA-VQGRMQAGETLPLAGVPIVVKDNINVTGTRTTCGSRMLANYV 96 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 Y +T QKL GAV++GK NMDEFAMGSS E+S GP ++PW + PGGSS Sbjct: 97 SPYTATAAQKLQGAGAVIVGKANMDEFAMGSSTESSASGPTLNPW-----DHERVPGGSS 151 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GGS+ AVA + S+G+DTGGS+RQPA+ G G KPTYGR SR G++++A SLDQ G Sbjct: 152 GGSAVAVAAGISPVSLGSDTGGSVRQPAALCGVYGFKPTYGRVSRYGLVAYASSLDQIGP 211 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 R+ D A+L+ IAG+D DAT ++ P + S++G+ VG+ +E L +P Sbjct: 212 FARSAEDLALLMNVIAGHDPRDATSLDAPA-RFAVGGADSLRGLRVGVIRE-SLGGNTPG 269 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 ++ + L+ AGA + E+S+P +YA+ AYY+I+ EASSNLARYDG+ YG RV G Sbjct: 270 VEAALGATLDALRGAGAVVGEVSIPELEYAIAAYYLIAMPEASSNLARYDGMVYGERVPG 329 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 D+ TR GFGQEV+ RI++GTY LSS YD++Y +A K+R LI +FT AF Q Sbjct: 330 GDVTRSMTLTREQGFGQEVQRRILLGTYALSSGYYDAYYAKAMKVRRLIADEFTTAFGQ- 388 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKM 457 DV++TPT+P AF G E S + DV TVAVN+AGLPA+SVPA E K++ Sbjct: 389 YDVLVTPTSPFPAFRRG--EKASDPLAMYAADVDTVAVNLAGLPALSVPAGFEEVDGKRL 446 Query: 458 PLGLQLIGQPFREE 471 P+G+Q I ++E Sbjct: 447 PVGVQFIAPALQDE 460 >gi|152965286|ref|YP_001361070.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kineococcus radiotolerans SRS30216] gi|189045251|sp|A6W7L7|GATA_KINRD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|151359803|gb|ABS02806.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kineococcus radiotolerans SRS30216] Length = 516 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 213/497 (42%), Positives = 314/497 (63%), Gaps = 26/497 (5%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN--------SQMNAYIEVVAQKAR 53 SEL + + LR+ ++SA E+ +++ I+ + + ++A++ V + A Sbjct: 6 SELVRWDAARLSEALRAGEVSAEEVTRAHLDRIDAVDGPTSGAGETGVHAFLHVDHEGAL 65 Query: 54 AAAEESDK-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 A A + D R + L G+PIG+KD TKG+ T A S +L G+ P Y++TV ++L Sbjct: 66 ARARQIDADRAAGAELGPLAGVPIGVKDVLTTKGLPTTAGSRMLQGWVPPYDATVVRELH 125 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 G V+LGK NMDEFAMGS+ E S YG +PW D T PGGS GGS+AA+A F Sbjct: 126 AAGLVVLGKTNMDEFAMGSTTEHSAYGVTRNPW---DPTR--IPGGSGGGSAAALAAFEA 180 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 +IG+DTGGSIRQPA+ TGTVG+KPTYG SR G+I+ A SLDQAG RTV D+A+L Sbjct: 181 PLTIGSDTGGSIRQPAAVTGTVGVKPTYGAVSRYGLIALASSLDQAGPCARTVLDTALLH 240 Query: 233 KAIAGYDECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 IAG+D D+T + VPD A + G+ VG+ +E + P + +++ Sbjct: 241 AVIAGHDPYDSTSIPAAVPDVVGAARLGATGDLAGVRVGVVRELSGEGYEPGVLARFEES 300 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDIL-- 344 ++ L+ AGA++VE+SLP+ +AL AYY+I P+EASSNLA++DG+RYGLRV EG+ + Sbjct: 301 LTELRAAGAEVVELSLPNIVHALAAYYLILPSEASSNLAKFDGMRYGLRVVPEGEHVTAE 360 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 + TR+ GFG E K RI++GTY LS+ YD++Y A+K+RTL++RDF AF VDV+ Sbjct: 361 AVMRATRAAGFGDEAKRRIILGTYALSAGYYDAYYGSAQKVRTLVQRDFDAAFGS-VDVL 419 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 ++PT PT A+ LG++ ++ +M DV T+ N+AG+P +S+P L E +P+GLQ++ Sbjct: 420 VSPTAPTVAYRLGEKLDDPLAM--YAGDVATIPANLAGIPGMSLPCGLSE-GLPVGLQVL 476 Query: 465 GQPFREETLFSVGQIIE 481 ++ L+ VG +E Sbjct: 477 APQQADDRLYRVGAALE 493 >gi|238028927|ref|YP_002913158.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia glumae BGR1] gi|237878121|gb|ACR30454.1| Glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia glumae BGR1] Length = 496 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 214/495 (43%), Positives = 307/495 (62%), Gaps = 23/495 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L + SAVEL Y+Q I+ + ++NA++ V A+ A A E+D G Sbjct: 5 SLTELRAALDAGQTSAVELAQLYLQRIDAAR-ELNAFVHVDAELTLAQAREADAARAAGR 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+P+ KD F T+G + A S +L + +++TV ++L G V LGK NMDEF Sbjct: 64 AGPLAGLPVAHKDVFVTRGWRSTAGSKMLANYTSPFDATVVERLAAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S +G V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIRQP Sbjct: 124 AMGSSNENSAFGAVKNPWDP-----RAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+AG+D D+T + Sbjct: 179 ASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCALLLDAMAGFDTRDSTSLE 238 Query: 248 LPVPDYERAL----------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + R L + + G+ +G+P EY L+ + + + GA Sbjct: 239 REGEAFGRHLGAPWTPDAPAGKPLAGLRIGLPDEYFGAGLADDVRAAIDAALKQYEALGA 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ GFG Sbjct: 299 TLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRAEGFG 358 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTYVLS YD++YL+A+KIR +I +DF AFEQ DVI+ P +PT A+ L Sbjct: 359 PEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQNAFEQ-CDVIMGPASPTVAWDL 417 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETL 473 G + ++ M D++T++V++AGLP +SVP + P+GLQ+IG F E + Sbjct: 418 GAKGDDPLQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANARRPVGLQIIGNYFNEARM 475 Query: 474 FSVGQIIEKEAGYFR 488 V ++ + + Sbjct: 476 LQVADAFQRATDWHK 490 >gi|170035642|ref|XP_001845677.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Culex quinquefasciatus] gi|167877796|gb|EDS41179.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Culex quinquefasciatus] Length = 496 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 190/475 (40%), Positives = 278/475 (58%), Gaps = 6/475 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 RSK + + + + + +NA++ + +Q A AE S +R +G L+G Sbjct: 16 FRSKSLDPLTFTEHTLHRASDRAKHLNAFVRISSQTALQQAEASTQRHRSGSTLGPLDGA 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD F T+ + T S +L+ F P Y +TV ++L GAV++GK NMD+F MGS Sbjct: 76 TIAVKDNFCTRNVATTCASRMLESFVPTYSATVWERLERGGAVLVGKTNMDQFGMGSGTV 135 Query: 135 TSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 S +GP + W ++F GGSSGGS+ AVA +C A++G+DTGGS R PAS+ G Sbjct: 136 DSIFGPTRNCWSESLEGERFRIAGGSSGGSAVAVASGVCFAALGSDTGGSTRNPASYCGV 195 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+I S+D GI+TRTV+D A +L AIAG DE D+T V P Sbjct: 196 VGLKPTYGLLSRHGLIPLVNSMDVPGILTRTVKDCATVLNAIAGPDERDSTTVKKPFKPV 255 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 E ++G+ +GIP EY + LS + TW + L+DAGA + +SLP+T ++ Sbjct: 256 ELPESICLKGLRIGIPVEYHCEGLSEEVLHTWAKVADMLEDAGATVTSVSLPYTSASIFV 315 Query: 314 YYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y I++ E SSN++RYDG+ +GLR E ++Y +R+ GF VK+RI+ G Y L Sbjct: 316 YSILNQCEVSSNMSRYDGIEFGLRSDEDASTEQLYARSRAEGFNGVVKNRILTGNYFLLR 375 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YN 431 + YD + +A ++R LI DF +AF + VD +LTPTT +SA PL ++ + Sbjct: 376 KNYDKFFQKALQVRRLIAEDFDKAFTK-VDFLLTPTTLSSA-PLYEDFVQGTNRDQCAVQ 433 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D T NM G+PAIS+P L E K+P+ LQL+G F E+ L +V + IE + + Sbjct: 434 DFCTQPANMGGIPAISLPIRLSEHKLPISLQLMGPNFSEQNLLTVAKWIESQVEF 488 >gi|310657333|ref|YP_003935054.1| glutamyl-tRNA(gln) amidotransferase subunit a [Clostridium sticklandii DSM 519] gi|308824111|emb|CBH20149.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Clostridium sticklandii] Length = 491 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 193/470 (41%), Positives = 292/470 (62%), Gaps = 11/470 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++ E L +IS+V++ SYI IE + ++ AY+ + ++A AE D + NG Sbjct: 8 MSIKELESALDKSEISSVDIAKSYIAQIEKVDDKIGAYL-YINKEAVKQAEALDTKRKNG 66 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ +KD T + T S ++ G+ +++ V ++L A+MLGK+N+D Sbjct: 67 EKLGRLAGMPMALKDNMCTVDMPTTCASKMMQGYMSPFDAEVVKRLKGEDAIMLGKVNLD 126 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S E SYY +P PGGSSGGS+A+V ++G+DTGGSIR Sbjct: 127 EFAMGGSTENSYYKITTNPHDI-----SRVPGGSSGGSAASVVSHQALVALGSDTGGSIR 181 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VGIKPTYG SR G+++FA SLDQ G I R V D+A+ L+ + G+D D+T Sbjct: 182 QPASFCGAVGIKPTYGSVSRSGLVAFASSLDQIGPIARNVEDAALTLEVLIGHDAKDSTS 241 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V P YE + + I+GM + +P+E+ + + ++ + + GA + ++ + Sbjct: 242 VKFEKPSYETEIKKDIKGMKIALPREFFEQGVQSDVKESILKAAEKFEKLGAIVEDVKIK 301 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 + YAL AYYIIS AEASSNLAR+D ++YG R E + E+Y+ +R GFG+EVK RI+ Sbjct: 302 NLDYALSAYYIISSAEASSNLARFDSIQYGYRTDEYASLEELYKKSRQEGFGKEVKRRIL 361 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LSS YD++Y +A K+RTLIK+ + E F+ D+IL+P PT+A+ +G E + Sbjct: 362 LGTYALSSGFYDAYYKKALKVRTLIKQSYDEIFKD-YDMILSPVAPTTAYKIG--EKRTD 418 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D++TV VN+AGLPA+S+ ++++P+G+QLIG F E+TL Sbjct: 419 PVEAYMGDIYTVPVNIAGLPALSMNCGFDKEELPVGMQLIGSTFSEDTLL 468 >gi|124514995|gb|EAY56506.1| Glutamyl-tRNA(Gln) amidotransferase A subunit / Amidase [Leptospirillum rubarum] Length = 492 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 185/473 (39%), Positives = 280/473 (59%), Gaps = 9/473 (1%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 S+ S E +++ IE + + A++ V + A + ++ N G P+ Sbjct: 17 SRQFSIEEATREFLERIEREDPALGAFLSVNSNAINRARQLDNRLARNPAPSPFYGYPVA 76 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD + + T S +L FRP +TV +L + GA++LGK NMDEFAMGSS E S Sbjct: 77 IKDNLHVRDLPTTCASRMLANFRPVENATVVDRLLEAGAIVLGKTNMDEFAMGSSTENSA 136 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW + PGGSSGGS+ AVA + ++G+DTGGSIRQPA+F G +G+K Sbjct: 137 MGVTRNPW-----DLRRVPGGSSGGSAVAVAADMAPMALGSDTGGSIRQPAAFCGVLGLK 191 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYGR SR G+++F+ SLDQ G R D+ ++ ++G D D T + + R Sbjct: 192 PTYGRISRYGLVAFSSSLDQIGPFARHAEDALEMMLLLSGPDGRDMTVESRDPSEMARDF 251 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 +QG +G+P+E+ + L P + + ++ L AGA I LP QY + YYII Sbjct: 252 AGKVQGTVIGMPEEFFGEGLDPAVAASLERAKDVLAAAGAVFRPIRLPSAQYGINVYYII 311 Query: 318 SPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + +EA+SNL+RYDGVRYG R ++ K+I ++Y +TR GFG EVK RI++GT+ LS+ D Sbjct: 312 ATSEAASNLSRYDGVRYGYRSLKAKNIRDLYTHTRQEGFGPEVKRRILLGTFALSAGYQD 371 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 +Y +A++++ LI+ +F AF + VDVI PTTPT F G++ ++ SM +D++T+ Sbjct: 372 QYYRKAQQVQALIREEFDRAFHE-VDVIFAPTTPTPPFLFGEKVSDPLSM--YLSDIYTI 428 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + N+AGLPA+S P+ + +P+G QLIG + E L + I+E+ G RP Sbjct: 429 SANLAGLPALSSPSWPTPEGLPVGAQLIGPAWSEGRLLRLAAILEEGVGIHRP 481 >gi|329116971|ref|ZP_08245688.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus parauberis NCFD 2020] gi|326907376|gb|EGE54290.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Streptococcus parauberis NCFD 2020] Length = 488 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 193/471 (40%), Positives = 293/471 (62%), Gaps = 11/471 (2%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N V + + L +K+I+ +L+++ I I+ + ++I + +A AAA+ D++ I Sbjct: 4 NHFTVDQLHELLVTKEITVRQLIEATIADIKEREEVIGSFITIAEDQALAAADAIDEKGI 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + + + GIP+ +KD +TK I T A S +L + P +++TV +++GK NM Sbjct: 64 DPE-NVMAGIPLVVKDNISTKDILTTAGSKMLYNYEPIFDATVITNAKAKDMIIIGKANM 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMG S ETSY+ + W D T PGGSSGGS+ +VA S+G+DTGGSI Sbjct: 123 DEFAMGGSTETSYFKKTKNTW---DHTK--VPGGSSGGSATSVASGQAPLSLGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+F G VG+KPTYG SR G+I+F SLDQ G ++TV+++A L+ +A DE D+T Sbjct: 178 RQPAAFNGVVGMKPTYGTISRFGLIAFGSSLDQIGPFSKTVKENAQLMNVLASPDEKDST 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + + D+ + Q I+GM + +PKEY + + P I ++ GA + E+SL Sbjct: 238 SAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEIKDNVLAAAKQFEELGATVEEVSL 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRI 363 PH++Y + YYII+ +EASSNL R+DG+RYG R E L ++Y TRS GFG EVK RI Sbjct: 298 PHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATSLDDIYVKTRSQGFGDEVKRRI 357 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD+++ +A ++RTLI +DF + F D+I+ P TP+ AF L ++ Sbjct: 358 MLGTFSLSSGYYDAYFKKAGRVRTLIIQDFEKVFAN-YDLIIGPATPSPAFGLDTLNHDP 416 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 SM D+ T+ VN+AG+P IS+P+ + +P+G+QLIG + EET++ Sbjct: 417 VSM--YLADLLTIPVNLAGIPGISIPSGFVD-GLPVGIQLIGPKYSEETVY 464 >gi|110636452|ref|YP_676659.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Cytophaga hutchinsonii ATCC 33406] gi|110279133|gb|ABG57319.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Cytophaga hutchinsonii ATCC 33406] Length = 476 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 195/479 (40%), Positives = 292/479 (60%), Gaps = 10/479 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + ++ E R L I+ L + Y++ IE + + +NAY+EV AQ+A A A+ D +I Sbjct: 4 YNSLQEVRKDLSEGKITCRSLTEYYLKNIE-AKAHLNAYVEVYAQEALATADIVDAKIKA 62 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L G+ +G+KD K QA S+IL GF + T +++ A+++G+ + D Sbjct: 63 GTAGKLAGMVVGLKDVLCHKNHGLQASSNILKGFVSQFNGTAVERVIQEDAIIIGRQSCD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S +GPV + D+ + PGGSSGGS+ V C S+G+DTGGS+R Sbjct: 123 EFAMGSSNENSAFGPVKN-----DADNTRVPGGSSGGSAVGVQADTCLISLGSDTGGSVR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+F +G KP+Y R SR G+I++A S D GI+ R++ D+A++L+ IAG D+ D+T Sbjct: 178 QPAAFCDIIGFKPSYSRISRYGLIAYASSFDSIGIMARSIEDTALMLEVIAGQDDFDSTV 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + PVP Y L S + + + + ++ I + Q+ I LK G + + P Sbjct: 238 SSKPVPSYSTELGFSGKAKICYLKEAVESEGVAKEIREATQKKIDQLKKDGHTVEAVEFP 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIM 364 Y LP YYI++ AEASSNL+R+DGV+YG R E G D+ MY+ TRS GFG+EVK RIM Sbjct: 298 LLDYILPTYYILTTAEASSNLSRFDGVKYGYRSENGTDLESMYKKTRSEGFGKEVKKRIM 357 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+VLS+ YD++Y +A+K+R LI R++TE D +L PTT T+AF +G ++ S Sbjct: 358 LGTFVLSAGFYDAYYTKAQKVRRLI-REYTEKILSEYDFMLLPTTTTTAFKIG--DHQSD 414 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + D+FTV N+AG+PAIS+P + +G+QL+G+ F E L + + K+ Sbjct: 415 PLAMYLADIFTVHANLAGIPAISIPNGKDAAGLAIGIQLMGREFEEAKLLAFSNYLLKQ 473 >gi|319441126|ref|ZP_07990282.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium variabile DSM 44702] Length = 498 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 209/491 (42%), Positives = 314/491 (63%), Gaps = 20/491 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L + +++ + ++S+V++ +++ I +S ++A++ V +A AAAE++DK Sbjct: 14 SDLTTWTAAALAEKIHAGEVSSVDVTRAHLDRIAAVDSDVHAFLHVGGTEALAAAEQADK 73 Query: 62 RIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+ A L G+P+ +KD F T T S IL+G+ Y++TVT+K+ G +LG Sbjct: 74 DIAAGNVASPLAGVPLALKDVFTTTDAPTTCASKILEGYMSPYDATVTRKIRAAGIPILG 133 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YGP +PW D T T GGS GGSSAA+A + +IGTDT Sbjct: 134 KTNMDEFAMGSSTENSAYGPTHNPW---DLTR--TAGGSGGGSSAALAAGMAPLAIGTDT 188 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 189 GGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTGRTVLDTALLHEVIAGHDR 248 Query: 241 CDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDA 295 DAT PV A + ++G+ +G+ K+ + L ++++++ + LK Sbjct: 249 FDATSSQRPVAPVVAAAKEGANGDLRGVKIGVVKQLESVRGLQAGVEESYKASLEQLKSQ 308 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ P YAL AYY+I P E SSNLAR+DG+RYG R G D E+ TR Sbjct: 309 GAEIVEVDCPSFDYALNAYYLILPCEVSSNLARFDGMRYGQR-RGDDGHHSADEVMAITR 367 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++Y++A+++R LI +DF +AF Q VDV+++P TPT Sbjct: 368 AEGFGPEVKRRIILGTYALSVGYYDAYYIKAQRVRNLIAQDFAKAF-QDVDVLVSPVTPT 426 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 +AF LG++ ++ +M +++ D+ T+ +N+AG+ +SVP L + +P+GLQ++G + Sbjct: 427 TAFSLGEKADDPLAM-YLF-DLCTLPLNLAGVCGMSVPGPLATDTGLPVGLQIMGPAHGD 484 Query: 471 ETLFSVGQIIE 481 + L+ VG E Sbjct: 485 DRLYKVGAAFE 495 >gi|184200459|ref|YP_001854666.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Kocuria rhizophila DC2201] gi|183580689|dbj|BAG29160.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Kocuria rhizophila DC2201] Length = 535 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 206/492 (41%), Positives = 308/492 (62%), Gaps = 31/492 (6%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQ-------------MNAYIEVVAQKARAAAEESDK 61 ++ S ++S+VE V +++ I+ ++ +NA++ ++A A E D+ Sbjct: 18 KVASGEVSSVEAVQAHLDQIDATDGAALDTEDRSRGTDGLNAFLHRNTEEALRVAREVDE 77 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G+ +L G+P+ +KD TKG T A S +L+GF Y+ TVT+KL +LG Sbjct: 78 ARAKGEELPELAGVPVAVKDLIVTKGQPTTAASRMLEGFMSPYDGTVTRKLRAARMPILG 137 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMGSS E S +GP +PW D T PGGS GGS+AAV+ F ++GTDT Sbjct: 138 KTNLDEFAMGSSTEHSAFGPTRNPW---DLTK--IPGGSGGGSAAAVSAFQAPLALGTDT 192 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+ TGTVG+KPTYG SR G+I+ A SLDQ G +RTV D+A+L + + G+D Sbjct: 193 GGSIRQPAAVTGTVGVKPTYGSVSRYGVIAMASSLDQVGPCSRTVLDAALLHEVVGGHDP 252 Query: 241 CDATCVNLPV-----PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T + PV A D ++G+ VG+ K+ + + + +++ + L+ A Sbjct: 253 ADSTSLPDPVGGYAQAARAGAADGGLKGLRVGVVKQLTGEGFQAGVQQRFEESLELLRGA 312 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRS 352 GA+IVE+ P+ QYAL AYY+I +E SSNLA+YDGVR+GLRV EG +E + +R+ Sbjct: 313 GAEIVEVETPNFQYALGAYYLIMSSEVSSNLAKYDGVRFGLRVTPEGTPTIEKVMGASRA 372 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LS+ YD++Y A+++RTL++RDF AFE DV+++PT PT+ Sbjct: 373 AGFGDEVKRRIILGTYALSAGYYDAYYGSAQQVRTLVQRDFAAAFET-ADVLISPTAPTT 431 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 AF +G + ++ M ND+ T+ N+AG+PAIS+P L E +P+G+Q + P RE+ Sbjct: 432 AFDIGGVDESADPMRMYLNDIATIPTNLAGIPAISLPGGLAPEDGLPVGIQFMA-PARED 490 Query: 472 T-LFSVGQIIEK 482 ++ G +E+ Sbjct: 491 ARVYRAGAGLER 502 >gi|320159605|ref|YP_004172829.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Anaerolinea thermophila UNI-1] gi|319993458|dbj|BAJ62229.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Anaerolinea thermophila UNI-1] Length = 527 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 210/516 (40%), Positives = 309/516 (59%), Gaps = 44/516 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQ----------AIENSN------SQMNAYIE 46 EL ++ E LR + SAVE++ S ++ A+ENS+ +++A+I Sbjct: 2 ELCDLSAVELYRLLRERKTSAVEILQSTLERIGEVEGRMGALENSDLTEEDKQKVHAFIT 61 Query: 47 VVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 + ++A A D R+ G D L GIP+ IKD F K T A S IL F Y + Sbjct: 62 LTDERALEQARRVDARLAAGEDPGALAGIPVSIKDIFCVKDTPTTAASRILANFTAPYTA 121 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI-SPWRSMDSTDKFTPGGSSGGSS 164 T ++L +GA+++GK+N+DEF GSSNE+S + P +PW PGGSSGGS+ Sbjct: 122 TPVERLEQSGALLVGKVNLDEFTYGSSNESSAFKPTPRNPW-----DPSRVPGGSSGGSA 176 Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 AVA S+GTDT GSIRQPASF G VG+KPTYGR SR G+I+FA SLD G + + Sbjct: 177 TAVAAGESVLSLGTDTAGSIRQPASFCGVVGLKPTYGRVSRYGLIAFASSLDCPGPLAKD 236 Query: 225 VRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSP---- 279 V +A++L+ IAG D D+T +PVPDY L++ ++G+ +G+ P +R+ Y +P Sbjct: 237 VSGAAMMLQVIAGADPKDSTTATVPVPDYLAELEKGVKGLRIGLSPDYFRITYPTPDGGF 296 Query: 280 -------TIDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDG 331 I++ + L+ GA+I+E + +P+T+Y +PAY++IS EA+SNL RYDG Sbjct: 297 EQQPLPAEIEQAVYRAADLLRQMGAEIIEDVPMPNTRYGIPAYFVISRVEAASNLHRYDG 356 Query: 332 VRYGLRVEG--KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 V+YG R D+ EMY TR+ GFG + K RI++G YV +++ +Y RA ++RTLI Sbjct: 357 VKYGYRTPQAVADLREMYRKTRAEGFGIQPKLRILMGMYVSAAQYSARYYQRALRVRTLI 416 Query: 390 KRDFTEAFEQG----VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 +RDF +AF++ +D +LTPTTPT+AF + +S M Y D TV N AG+P Sbjct: 417 RRDFEQAFDRNGAYRLDALLTPTTPTTAFEMAAVYGDSVLMQ--YADQLTVPANHAGVPG 474 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +S+PA L + +P+G+QL+G F E+ L +G+ E Sbjct: 475 LSIPAGLDAQGLPIGIQLLGADFSEDILLRIGRAYE 510 >gi|149199745|ref|ZP_01876776.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lentisphaera araneosa HTCC2155] gi|149137150|gb|EDM25572.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Lentisphaera araneosa HTCC2155] Length = 488 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 209/489 (42%), Positives = 312/489 (63%), Gaps = 13/489 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS +N +++ E+ D+L + ++++ +L ++ + I+ ++ A + + +KA AAA+ SD Sbjct: 1 MSLIN-LSLHEAADKLAAGEVTSRQLCEALLAQIDKVEGKVGALVSINNEKALAAADASD 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ +G+PI IKD G + S ILDG Y+STV +KL + G V+ Sbjct: 60 ARRAAGETLGRYDGLPITIKDNIVEAGEEAKCSSSILDGLENVYDSTVVRKLKEAGCVVF 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ NMDEFAMGS+ ETS +P ++D PGGSSGGS+A VA ++G+D Sbjct: 120 GRANMDEFAMGSTTETSQIKKTSNP-HNLDCV----PGGSSGGSAAGVASKEFLGALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYG SR G+++FA SLDQ G +++ V+DSA++L I G D Sbjct: 175 TGGSIRQPASFCGIVGLKPTYGLVSRFGLVAFASSLDQIGPMSKDVQDSALMLDIINGED 234 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGA 297 E D+T + + D+E +L + ++GM +G+P EY +D + + + + I+ L+ GA Sbjct: 235 EKDSTAIPGKITDFEASLQGADVKGMKLGVPAEYFEVDGMDADVKASVEAAIAKLEAMGA 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFG 356 +IV +SLPHT+YA+ YY+I+ AEA +NLAR+DG+RYG R G DI+E Y +RS GFG Sbjct: 295 EIVPVSLPHTKYAIATYYVIATAEACTNLARFDGIRYGKRYTGTDDIIETYFESRSRGFG 354 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +EV+ RIM+GTYVLSS +Y RA+K+RTLI++DF +A+EQ D+I+ P +P +AF Sbjct: 355 KEVQRRIMLGTYVLSSYEDHKYYHRAQKVRTLIRQDFEKAYEQ-CDLIVAPVSPETAFKS 413 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G E++ M D+ T + N+AG+ ISVP + MP+GLQ++G E+ L Sbjct: 414 G--ESSEDPMKMYLADILTTSANLAGICGISVPCGKDKNDMPIGLQIMGPAMGEKKLLQA 471 Query: 477 GQIIEKEAG 485 E+ AG Sbjct: 472 AYAYEQNAG 480 >gi|240168928|ref|ZP_04747587.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium kansasii ATCC 12478] Length = 493 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 212/496 (42%), Positives = 313/496 (63%), Gaps = 20/496 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + R+ +K++S+ EL + + I ++ + +A++ V A +A +AA D Sbjct: 1 MSELIRSDAATLAARVAAKELSSTELTQACLDQIAATDDRYHAFLHVGADQALSAAGAVD 60 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + G+ L G+P+ +KD F T + T S IL +R Y++TVT +L G + Sbjct: 61 QALAAGETLPSPLAGVPLALKDVFTTIDMPTTCGSKILQDWRSPYDATVTARLRAAGIPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YGP +PW + D+ PGGS GGS+AA+A F +IG+ Sbjct: 121 LGKTNMDEFAMGSSTENSAYGPTRNPW----NVDRV-PGGSGGGSAAALAAFQAPLAIGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+ Sbjct: 176 DTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGH 235 Query: 239 DECDATCVNLPVPDYERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T V+ VPD A ++G+ +G+ K+ R + P + ++Q + L Sbjct: 236 DPRDSTSVDAEVPDVVAAARAGASGDLRGVRIGVVKQLRGEGYQPGVLASFQAAVEQLTA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA++ E+ PH +AL AYY+I P+E SSNLAR+D +RYGLRV G D E+ T Sbjct: 296 LGAEVSEVDCPHFDHALAAYYLILPSEVSSNLARFDAMRYGLRV-GDDGSHSAEEVMAMT 354 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RIMIGTY LS+ YD++Y +A+K+RTLI RD EA+ + VDV+++P TP Sbjct: 355 RAAGFGPEVKRRIMIGTYALSAGYYDAYYNQAQKVRTLIARDLDEAY-RSVDVLVSPATP 413 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFR 469 T+AFPLG++ ++ +M +++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ Sbjct: 414 TTAFPLGEKVDDPLAM-YLF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALA 471 Query: 470 EETLFSVGQIIEKEAG 485 ++ L+ VG E G Sbjct: 472 DDRLYRVGAAYEAARG 487 >gi|145220334|ref|YP_001131043.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Prosthecochloris vibrioformis DSM 265] gi|189045256|sp|A4SGD2|GATA_PROVI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|145206498|gb|ABP37541.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlorobium phaeovibrioides DSM 265] Length = 482 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 200/489 (40%), Positives = 301/489 (61%), Gaps = 12/489 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + R RL + ++S E+V Y++ IE N Y+ V +A A D+++ Sbjct: 1 MQFSSYEDLRPRLLAGEVSCEEVVRVYLERIERHGDD-NIYLTVFRDEAIERAAALDRKL 59 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G + L G+P+ IKD + G S +L+G+R Y++TV ++L+D A+ LGK Sbjct: 60 REGGEPGRLFGLPMAIKDNISMDGAPLTCASKMLEGYRSVYDATVIRRLFDEDAIFLGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S +GPV +P+ PGGSSGGS+AAVA LC ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAFGPVQNPF-----DPSRVPGGSSGGSAAAVAAGLCMVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F VG+KPTYGR SR G+++FA S DQ G+++ + D+A++L +AG D D Sbjct: 175 SVRQPAGFCDVVGLKPTYGRISRYGLVAFASSFDQIGVLSHSSMDAALVLGVMAGSDPHD 234 Query: 243 ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT + V DY + S++G+ +G+PKE+ + L+P + + + L+ GA++V+ Sbjct: 235 ATSSSHAVSDYCSEVSGVSVKGLKIGVPKEFFNEGLNPDVSRVVLARLEELRLQGAELVD 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 I+LP + +A+ AYY++ AEASSNLARYDG RYG R G D+ MY +R+ GFG EVK Sbjct: 295 ITLPKSDHAIAAYYVLVTAEASSNLARYDGARYGYRSAGATDLSSMYVESRTEGFGPEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLSS YD++Y +A+++R + + + EA + VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSSGYYDTYYKKAQQVRRVFQDRYREALSR-VDVIAGPTSPFPPFGIGAKT 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M DVFTV ++ G+PA+SVP + +P+G+ LI F E L + + + Sbjct: 414 ADPLEM--YLADVFTVPASIVGMPALSVPVGYDGENLPVGMHLICNFFEEGKLLGIARHM 471 Query: 481 EKEAGYFRP 489 ++ P Sbjct: 472 QRPVSRLNP 480 >gi|164688111|ref|ZP_02212139.1| hypothetical protein CLOBAR_01756 [Clostridium bartlettii DSM 16795] gi|164602524|gb|EDQ95989.1| hypothetical protein CLOBAR_01756 [Clostridium bartlettii DSM 16795] Length = 482 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 202/481 (41%), Positives = 299/481 (62%), Gaps = 12/481 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++ E +++S ++ + ++V SY+ I +++A++ + +A A+E D+++ G Sbjct: 1 MSIKELVAKIKSGEVKSYDVVKSYVDTINKKEDKIDAFLLLRTDEALQKAKEIDEKVAKG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI IKD T G+ T S +L+ F P Y++TV +KL A+++GK N+D Sbjct: 61 EKLGRLAGIPIAIKDNICTHGVRTTCASKMLEDFVPPYDATVIKKLQAEDAILIGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS E S +P +D T PGGSSGGS+AAV + ++G+DTGGSIR Sbjct: 121 EFAMGSSTENSAMKVTKNP---IDITR--VPGGSSGGSAAAVGSEMVPLALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G VG+KPTYG SR G+++F SLDQ G + V D+A LL IAG D+ D T Sbjct: 176 QPASFCGIVGMKPTYGLVSRFGLVAFGSSLDQIGPFSMNVEDNAYLLNIIAGEDDLDCTT 235 Query: 246 VN-LPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEIS 303 L DY + L Q I GM +GIPKE+ + L I + + LK+ G ++ E S Sbjct: 236 KKGLEKVDYTKELGQDISGMKIGIPKEFIEEKGLDSEIKDIVLKDLEALKELGCEVEEFS 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP T+ L YYIIS AEASSNLAR++ V YG R + + +M E +RS GFG+EVK R Sbjct: 296 LPSTKDGLAPYYIISSAEASSNLARFNSVSYGYRAKDYTSVDDMIEKSRSEGFGKEVKRR 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LSS YD++Y +A+K RT +K +F EAF++ D+IL P +P F +G+ + Sbjct: 356 IMLGTYALSSGYYDAYYNKAQKFRTKLKDEFKEAFKK-YDIILGPVSPILPFKIGERCED 414 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M D++T+ +N+A +PA+S+P ++ +P+G+QLIG F E+ ++ V +EK Sbjct: 415 PTAM--YLADIYTININLATVPALSMPGGKSKEGLPVGIQLIGDTFSEDKIYKVAYQLEK 472 Query: 483 E 483 + Sbjct: 473 K 473 >gi|46446304|ref|YP_007669.1| glutamyl-tRNA(Gln) amidotransferase chain A [Candidatus Protochlamydia amoebophila UWE25] gi|81627363|sp|Q6MDF5|GATA_PARUW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|46399945|emb|CAF23394.1| probable glutamyl-tRNA(Gln) amidotransferase chain A [Candidatus Protochlamydia amoebophila UWE25] Length = 489 Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 199/478 (41%), Positives = 294/478 (61%), Gaps = 12/478 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIINGDAR 69 E RD+ D+SA + Y+ I + ++ A++ V ++A A++ D KR+ N Sbjct: 8 EIRDQFIRGDVSASAITQHYLNRIAKYDQKIGAFLSVYEEQAMMQAKQLDQKRLANQPLG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIPI IKD KG + S L F+ Y+++V + L GAV++GK NMDEFAM Sbjct: 68 KLAGIPIAIKDNILVKGEISTCGSKFLTNFKSPYQASVIEYLLAEGAVIIGKTNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSS E S +PW K TPGGSSGGS+AAVAG L S+G+DTGGS+R PAS Sbjct: 128 GSSTENSALQKTSNPWNL-----KCTPGGSSGGSAAAVAGRLSPLSLGSDTGGSVRLPAS 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KPTYGR SR G++++ SLDQ G + D+A+L++ I + D+T + L Sbjct: 183 FCGVVGFKPTYGRVSRFGLVAYGSSLDQIGPLATNTADTALLMEVIGRHCPKDSTSIALG 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY SI GM +G+P E+ L+ L+ K +QQ ++ +K GA+IV+I L +Y Sbjct: 243 PEDYLSQFKDSIAGMKIGVPWEF-LENLADEPKKIFQQSVNLMKQLGAEIVDIDLSILKY 301 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +L YYI++ AEAS+NLAR+DG+RYG R + K + E+Y+ ++ GFG EVK RI++GTY Sbjct: 302 SLAVYYILATAEASTNLARFDGIRYGQRSPKAKTLEEVYDFSKEEGFGAEVKRRILLGTY 361 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ D++Y +A+K+RTLI R + EAF + D+I +P +P +AF +G ++ + Sbjct: 362 VLSAGYQDAYYKKAQKVRTLILRSYKEAFAK-CDLIASPVSPFAAFEIGAIKD---PLQM 417 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D++T+ +N+AGLPA+S+P + P+GLQLIG + + + I+EK + Sbjct: 418 YLEDIYTIGINLAGLPAVSIPNGFSKDGKPMGLQLIGAQKHDREVLNAAHILEKSLAF 475 >gi|227494614|ref|ZP_03924930.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinomyces coleocanis DSM 15436] gi|226832348|gb|EEH64731.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinomyces coleocanis DSM 15436] Length = 498 Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 205/503 (40%), Positives = 303/503 (60%), Gaps = 19/503 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E + E LR ++++VEL + + I + ++NA++ V A+ A A E D Sbjct: 1 MQEFLTKSALELAQMLRDGELTSVELTQACLDRITKVDGKVNAFLYVNAEGALETAREVD 60 Query: 61 K-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + L G+PI +KD T+GI T S IL+G+ P Y++ V +K+ +L Sbjct: 61 AARAAGEELHALAGVPIALKDNLVTRGIPTTCSSKILEGWIPPYDAFVVKKIKAAKLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S +G +PW + PGGS GGS+AAV+ ++ ++GTD Sbjct: 121 GKTNLDEFAMGSSTEHSAFGVTRNPWNL-----ECIPGGSGGGSAAAVSAYMAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G +TRTV D+A L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGAVSRYGAIAMASSLDQIGPVTRTVADAAALQELIGGHD 235 Query: 240 ECDATC---VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T V + D R+ + + G+ +G+ KE + P + ++ + ++ L G Sbjct: 236 PMDSTSLTDVATGLLDAARS-EGDLTGVKIGVVKELSGEGYQPGVLASFNEAVANLVARG 294 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRS 352 A++VE+S P+ YAL AYY+I PAE SSNLAR+DG+RYG+RVE + + TR Sbjct: 295 AEVVEVSCPNFDYALAAYYLIMPAEVSSNLARFDGMRYGIRVEPTEGPVTAQRVMAATRG 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTYVLSS YD Y A K+RTLI+ DF AFE+ DV+++PT PT+ Sbjct: 355 AGFGAEVKRRIILGTYVLSSGYYDQFYGAALKVRTLIQDDFKAAFEK-CDVLVSPTAPTT 413 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AF G++ ++ M ND+ T+ N+AG+ A+S+P+ + E +P+G Q+I +++ Sbjct: 414 AFKFGEKSDD--PMAMYLNDIATIPANLAGVAAMSIPSGVAEDGLPVGFQVIAPARKDDV 471 Query: 473 LFSVGQIIEK--EAGYFRPHKWW 493 ++ V + +E + P K W Sbjct: 472 MYRVARFVEDAVDVAGNCPAKTW 494 >gi|300781374|ref|ZP_07091228.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium genitalium ATCC 33030] gi|300533081|gb|EFK54142.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium genitalium ATCC 33030] Length = 484 Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 203/489 (41%), Positives = 303/489 (61%), Gaps = 17/489 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ ++ E +++++ ++++ E+ +++ I ++ + A++ + A++A A+E D Sbjct: 1 MANWTELSAHELAEKIQAGEVTSREITQAFLDKIAETDGDIGAFLHIGAEEALQVADEVD 60 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 ++ G+ A L G+P+ +KD F T T A S +L+G+ Y++T+ K+ + + Sbjct: 61 AQVAAGEKPASPLAGVPLALKDLFVTTDAPTTAASKMLEGYMSPYDATIVTKIREAKIPI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+DEFAMGSS E S Y +P + TPGGS GG++AA+A IGT Sbjct: 121 LGKTNLDEFAMGSSTENSAYKITRNPHDL-----ERTPGGSGGGTAAALAANQAPLGIGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPAS TGTVG+KPTYG SR G+I+ A SLDQ G +V D+A+L +AIAG+ Sbjct: 176 DTGGSIRQPASLTGTVGVKPTYGAVSRYGMIANASSLDQCGPCANSVLDAALLHEAIAGH 235 Query: 239 DECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DE DAT V+ PV A Q + G+ VG K++ + + + + L+ Sbjct: 236 DEYDATSVDRPVSSVVEAAKQGASGDLSGVKVGRVKQFGGEGTQSGVVEAIDAAFAQLEK 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA+IVE+ P+ ++ + AYYII +E SSNLAR+DG+RYG R E+ TR G Sbjct: 296 QGAEIVEVDCPNFEHVMGAYYIIQTSEVSSNLARFDGMRYGQRKGEGSAEEVMARTRGEG 355 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTY LS YD++YL+A++IRTL+ +DF +AF+Q VDVI P TPT+AF Sbjct: 356 FGDEVKRRIILGTYALSVGYYDAYYLQAQRIRTLVAQDFQKAFDQ-VDVIAGPATPTTAF 414 Query: 415 PLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET 472 LG + ++ +M YN D+FT+ +N+AGLP +SVPA + +P+GLQLI F +E Sbjct: 415 KLGDKVDDPLAM---YNFDLFTLPLNLAGLPGMSVPAGTASDTGLPVGLQLIAPAFADER 471 Query: 473 LFSVGQIIE 481 L+ VG E Sbjct: 472 LYRVGAAFE 480 >gi|189345875|ref|YP_001942404.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlorobium limicola DSM 245] gi|229485866|sp|B3EFE2|GATA_CHLL2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|189340022|gb|ACD89425.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlorobium limicola DSM 245] Length = 474 Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 205/475 (43%), Positives = 303/475 (63%), Gaps = 16/475 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 R L S+ I+ ++V Y++ I+ N YI V ++A A + DK++ G L Sbjct: 10 RSELISRRITCEKVVLDYLERIDRHRDD-NIYITVFHEQAVEKARKLDKKLSEGGLPGKL 68 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ IKD + KG S IL+ + Y++T Q+L AV LGK NMDEFAMGS Sbjct: 69 FGMPMAIKDNISIKGAGLTCASRILENYESVYDATAVQRLEAEDAVFLGKTNMDEFAMGS 128 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 SNE S +G V +P+ D T PGGSSGGS+AAVA L A++G+DTGGS+RQPA F Sbjct: 129 SNENSAFGAVPNPF---DKTR--VPGGSSGGSAAAVAAGLALAALGSDTGGSVRQPAGFC 183 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG+KPTYGR SR G+++FA S DQ G++ R D++++L +AG DE DAT + VP Sbjct: 184 DIVGLKPTYGRISRYGLVAFASSFDQIGVLARNCDDASLVLGIMAGKDEHDATSSHRDVP 243 Query: 252 DYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY A D + ++G+ +G+PKEY + L+ + + + + L+D GA++V+I+LP + Sbjct: 244 DY--AADMAAVRVEGLKIGVPKEYFHESLNREVGEIVRAKLHELRDKGAELVDITLPESD 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 YA+ AYYI+ AEASSNLAR+DG RYG R +D+L MY N+R+ GFG+EVK RIM+GT Sbjct: 302 YAIAAYYILVTAEASSNLARFDGARYGYRSSRAEDVLAMYVNSRTEGFGKEVKRRIMLGT 361 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS+ YD++Y +A+++R + + + EA E+ VDVI PT+P F +G++ ++ M Sbjct: 362 YVLSAGYYDTYYKKAQQVRRVFQDRYREALEK-VDVIAGPTSPFPPFSIGEKMDDPLEM- 419 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DVFTV ++ G+PA+SVP + + +P+G+ LI F E L + + +++ Sbjct: 420 -YLADVFTVPASIVGMPAVSVPVGMDSRNLPVGMHLICDFFEEGKLMGIARHLQR 473 >gi|157131793|ref|XP_001655938.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Aedes aegypti] gi|108881773|gb|EAT45998.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Aedes aegypti] Length = 494 Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 191/489 (39%), Positives = 287/489 (58%), Gaps = 15/489 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E + R++ + V + +Q + N +NA+I +KA A AE+S R G Sbjct: 7 LKLKELSECFRTQTLDPVSATEQILQ-LANRLQHLNAFIRTSPEKALAQAEKSSTRHKTG 65 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L +G PI +KD F TKGIHT + +L+ F P Y +TV ++L NGA+++GK NMD Sbjct: 66 KPLSLLDGAPIAVKDNFCTKGIHTTCAARMLENFVPTYNATVYERLARNGAILVGKTNMD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 ++ MGS S +GP + W +++ F GGSSGGS+ AVA +C A++G+DTGGS Sbjct: 126 QYGMGSGTVDSIFGPTKNYWDAVEGESDFRIAGGSSGGSAVAVASGICFAALGSDTGGST 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS+ G VG KPTYG SR G+I S+D GI+TRTV D + AIAG D+ D+T Sbjct: 186 RNPASYCGVVGFKPTYGLLSRYGLIPLVNSMDVPGILTRTVDDCLAVFNAIAGPDDRDST 245 Query: 245 CVN-----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + + +PD + ++G+ VGIP EY + LS + TW + L+DAGA + Sbjct: 246 TIKTFFKPISLPDASKI---CLKGLKVGIPIEYHCEGLSDEVLTTWTKVADMLEDAGASV 302 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 +SLP+T ++ Y I++ E +SN+ARYDG+ +G R E ++Y +R+ GF Sbjct: 303 HPVSLPYTSASIFVYSILNQCEVASNMARYDGIEFGHRSDEDASTEQLYAKSRAEGFNGV 362 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK+RI+ G + L + YD ++ +A K+R LI DF AF++ VD++LTPTT + A P Sbjct: 363 VKNRILSGNFFLLRKNYDKYFEKALKVRRLIANDFDRAFQE-VDILLTPTTLSDA-PRYS 420 Query: 419 EENNSGSMGHI-YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E S + D T NM G+PA+S+P L E+++P+ LQL+ F E+ LF V Sbjct: 421 EFIQSNNRDQCAVQDFCTQPANMGGIPALSLPIRLSEQRLPISLQLMAPNFSEKRLFKVA 480 Query: 478 QIIEKEAGY 486 + IE++ + Sbjct: 481 KWIEEQVKF 489 >gi|159464645|ref|XP_001690552.1| glutamyl tRNA amidotransferase, subunit A [Chlamydomonas reinhardtii] gi|158280052|gb|EDP05811.1| glutamyl tRNA amidotransferase, subunit A [Chlamydomonas reinhardtii] Length = 533 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 207/493 (41%), Positives = 297/493 (60%), Gaps = 24/493 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E ++L +K SAVE+ Y+ AI ++S + +YI V ++A A A D RI G+ Sbjct: 37 IREIHEQLSNKKRSAVEVTQQYLDAIARTDSTVCSYITVDGEQALAQARAVDARIAAGET 96 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ IKD T G T A S IL + P++++T +L GAV LGK NMDEF Sbjct: 97 LGPLAGVPLAIKDNICTSGTRTTAGSQILRDYVPNFDATAVSRLRGAGAVFLGKTNMDEF 156 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 MGSS E S + P +PW + + PGGSSGGS+AAVA CAA++G+DTGGSIRQP Sbjct: 157 GMGSSTENSSFKPTRNPWDA-----ERVPGGSSGGSAAAVAAHECAAALGSDTGGSIRQP 211 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A F G VG+KPTYGR SR G+IS+A SLD G + TV D+A+LL IAG D DAT Sbjct: 212 AHFCGIVGLKPTYGRVSRYGLISYASSLDCIGPMAHTVEDAALLLSGIAGGDSHDATSSG 271 Query: 248 LPVPDY--------ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 PV D+ + + G +G+ + + ++P ID+ + L+ GA + Sbjct: 272 RPVVDFAAGLATGLAAGGSRPLAGKRIGLVAQTMGEGVAPAIDEAVRAAARHLESLGATV 331 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E+SLP LPAYY+++ +EASSNL+RYD VRYG R D+ ++ +R+ G G E Sbjct: 332 EEVSLPTFGQGLPAYYVLALSEASSNLSRYDSVRYGARSPAATDLASLFAGSRAEGLGGE 391 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI++GTY LS+ YD++Y RA+++RTL++++ A + D +L+P P++A+ LG Sbjct: 392 VKRRILMGTYALSAGYYDAYYKRAQQVRTLVQQEMVAALGR-CDALLSPAAPSAAYKLG- 449 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE------KKMPLGLQLIGQPFREET 472 E +S + D+ TV VN+AGLPA+ +PA ++P+GLQL+G+ F E Sbjct: 450 -EKSSDPLAMYKGDLMTVNVNLAGLPALVLPAGFVPGSAEGGAELPIGLQLVGRAFDEAG 508 Query: 473 LFSVGQIIEKEAG 485 L +G E+ AG Sbjct: 509 LLGLGYAYEQTAG 521 >gi|66548973|ref|XP_397317.2| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Apis mellifera] Length = 518 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 199/508 (39%), Positives = 286/508 (56%), Gaps = 24/508 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++ E ++ D+ ++ + ++ + + +NAYI V + A+ AE SD Sbjct: 1 MNKLLTTSIKEVSQKISIGDVRPSDITKASVK-VTSIIKPLNAYITVTDETAKKHAESSD 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R N + L+GIPI IKD + K T S +L F P Y +TV Q+L D GAV++ Sbjct: 60 LRQKNHNLLGRLDGIPIAIKDNYCIKEHLTTCASKMLSKFIPPYNATVYQRLKDAGAVLI 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF--------------------TPGGS 159 GK N+DEFAMGS SYYGP + W S D KF GGS Sbjct: 120 GKTNLDEFAMGSGTIDSYYGPTKNLWNS-DVLTKFYSCNKHKECIKQNTDANLWHIAGGS 178 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS+ AV C +IG+DTGGS R PAS+ G +G+KPTYG SR G+I S+D G Sbjct: 179 SGGSAVAVISGSCYGAIGSDTGGSTRNPASYCGLIGLKPTYGLVSRYGLIPLVNSMDVPG 238 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 I+TR V DS ++L IAG D+ D+TC+ +E A +I + +GIPKEY+ LSP Sbjct: 239 ILTRNVDDSVLILNTIAGPDKLDSTCLQKEYIPFEIADTINISDLRIGIPKEYKEKNLSP 298 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV- 338 I K W + +LK+ GA + +SLP+T Y++ Y +++ + +SNLA YDG+ YG R Sbjct: 299 EIQKCWDEVSQYLKEGGASLFTVSLPYTNYSIMCYSVLNRCDIASNLACYDGIEYGYRSN 358 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 E + +MY+ TRS GFG+ VK RI++G Y L Y+ +Y++A KIR LI DF + Sbjct: 359 EWNSVYDMYKKTRSEGFGKIVKERILVGNYFLLEENYEEYYVKAMKIRRLISEDFNAIWN 418 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 +D++LTPTT T A + D T NMAG+PA+++P L + +P Sbjct: 419 NNIDLLLTPTTLTEAPKYNDFISMDNQTQCSIQDYCTQPANMAGIPAVNIPIKLSKNNLP 478 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGY 486 L LQL+ PF E+ L +V + IE+ + Sbjct: 479 LSLQLMASPFNEKILLTVAKWIEQRVQF 506 >gi|115751658|ref|XP_788932.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115964271|ref|XP_001176588.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 521 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 192/512 (37%), Positives = 290/512 (56%), Gaps = 31/512 (6%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E RLR +SA EL I+ ++NA++ + A++ ++I G Sbjct: 4 LSIREVALRLRDGRLSATELCSRCIERARRCK-ELNAFVTERFDEVLGDAKKIHEKISKG 62 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIPI +KD ++T G+ T S +L ++P + +TV Q+L GA+ +GK N+D Sbjct: 63 TTIGTLGGIPIAVKDNYSTAGLRTTCGSKMLWNYKPPFTATVVQRLEHEGAITMGKTNLD 122 Query: 126 EFAMGSSNETSYYGPVISPWR----------SMDSTDKFTPGGSSGGSSAAVAGFL---- 171 EFAMGS S +GP + WR S + K++ G S A F+ Sbjct: 123 EFAMGSGTTESLFGPTRNIWRYPFHRVQKRLSQTAGGKYSSEGDVHESVADSDWFVSGGS 182 Query: 172 ------------CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 C A++G+DTGGS+R PASF G VG+KPTYG CSR G+IS SLD G Sbjct: 183 SGGSGVAVASGSCMAALGSDTGGSVRLPASFCGVVGLKPTYGLCSRHGLISLVNSLDVPG 242 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 I T+TV D+A +L A+AG+D D+T V P + + ++G+ +GIP+EY LS Sbjct: 243 IFTKTVDDTATVLGAMAGHDPMDSTTVTDPFTPFTLPDEIDVKGLHIGIPQEYHAPGLSA 302 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-V 338 + W + ++AGAK+ ISLPHTQY++ Y +++ E +SN+ARYDG+ YG R Sbjct: 303 DVLLAWSNAANLFENAGAKVSPISLPHTQYSIAVYSVLNTVEVASNMARYDGIEYGHRSS 362 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 EG+ E+Y +R GF V+ RI+ G Y L + Y+ ++L A+++R LI +DF AFE Sbjct: 363 EGRSTEELYALSRHEGFLDTVRGRILAGNYFLLEKNYERYFLHAQRVRRLIAQDFQAAFE 422 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 GVDVI+TPTT + + + D+FT VN+AGLPA+ VPA L + +P Sbjct: 423 DGVDVIVTPTTISDSPTYAQFCEVDTRTQAERQDIFTQPVNLAGLPAVVVPAMLSNRGLP 482 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 +G+QLIG+ F+++ L +V + E++ + PH Sbjct: 483 IGIQLIGKCFQDQDLLTVAKWFEQQVQF--PH 512 >gi|260438087|ref|ZP_05791903.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Butyrivibrio crossotus DSM 2876] gi|292809567|gb|EFF68772.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Butyrivibrio crossotus DSM 2876] Length = 481 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 199/490 (40%), Positives = 297/490 (60%), Gaps = 11/490 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ AV S++ +++ ++AVE + + + I+ +N Y+ + +KA A+ Sbjct: 1 MSLLDLTAVELSKE-IKAGKVTAVEAMQAVLDKIDEREDALNCYVTIDKEKALDEAKRVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I G L G+P+ IKD T+ + T S IL F P + + KL + GAV++ Sbjct: 60 KEIEEGRLTGPLAGVPVAIKDNMCTEDMLTTCSSKILYNFVPSFSAEAVNKLKEAGAVII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +G +P ++ PGGSSGGS+AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGITKNPH-----NEEHVPGGSSGGSAAAVAAEECFFALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS+ G VG+KPTYG SR G+I++ SLDQ G + + V D A +++ IAG+D Sbjct: 175 TGGSIRQPASYCGVVGMKPTYGTVSRYGLIAYGSSLDQIGPLCKDVTDCATIMEVIAGHD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D+T + D+ AL ++GM +GIP+ Y + L P + + L+ GA + Sbjct: 235 KKDSTSMKRDDLDFTSALTDDVKGMKIGIPRTYFGEGLDPEVKEAVLNVAKTLEAKGAVV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 E L YA+P YY I+ AEASSNL R+DGV+YG R + D L MY+ TRS GFG E Sbjct: 295 EEFDLDLVDYAIPTYYTIAAAEASSNLERFDGVKYGYRAKDYDDLHSMYKRTRSEGFGAE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI++G++VLSS YD++YL+A +++ LIK+ F +AF + D+++ P PT+A +G Sbjct: 355 VKRRILLGSFVLSSGYYDAYYLKALRVKALIKKAFDDAFAK-YDLLIGPVAPTTAPKIGS 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ M D++T+++N+AGLP +SVP +P+G+Q IG F+E+ L G Sbjct: 414 SLSDPIKM--YLGDIYTISLNLAGLPGLSVPCGKDSDGLPIGVQFIGDCFKEKNLIRAGF 471 Query: 479 IIEKEAGYFR 488 E+ G F Sbjct: 472 TYEQARGKFE 481 >gi|282856146|ref|ZP_06265429.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Pyramidobacter piscolens W5455] gi|282585905|gb|EFB91190.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Pyramidobacter piscolens W5455] Length = 486 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 206/484 (42%), Positives = 287/484 (59%), Gaps = 13/484 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ +E L+++ ++V S + + ++A + + A AR A D Sbjct: 2 ELYRLSAAEIVAGLKARRFKCADVVRSCLGRMREMEPHLHAMLHIAADSARKTAAAVDAA 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G A L G+P+ +KD T + T S IL G+ P Y++ V + L GA++LGK Sbjct: 62 IEEGRAGGRLMGVPVVLKDNICTSDMPTTCASKILAGWTPPYDAAVVEMLKAEGAIILGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N DEFAMG S E S +GP ++PW PGGSSGGS+AAVA S+G+DTG Sbjct: 122 ANCDEFAMGGSTENSAFGPTLNPWDV-----GRVPGGSSGGSAAAVAAGYAPLSLGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G G+KPTYG+ SR G+++FA SLDQ G RT D ++L AI +D Sbjct: 177 GSIRQPASFCGLYGMKPTYGQVSRYGLVAFASSLDQIGPFARTAEDLKLILSAICAFDSR 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T + P P ++ + D + G +G+ + L+ + I + GA+IVE Sbjct: 237 DSTSEDRPAPCFDLS-DAPLSGRKIGVLTKLVDGTLTADLQAALDGQIEECRRLGAEIVE 295 Query: 302 ISLPHT-QYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEV 359 ++LP +Y L YYI++PAEASSNLARYDGVRYG E K +LE+Y TR GFG EV Sbjct: 296 VALPKALEYGLACYYILAPAEASSNLARYDGVRYGAAHKEAKSLLELYVKTRGEGFGPEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RI+ GTYVLSS YD++YL A+K+R +IK++F AFEQ VD IL PT+PT AF LG+ Sbjct: 356 KRRILTGTYVLSSGFYDAYYLTAQKVRKVIKQEFAAAFEQ-VDAILLPTSPTPAFKLGE- 413 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S + D+FT+ VN+AGLP IS+ A +PLG+QLIG + + + + Sbjct: 414 --MSTPLSMYMADIFTIPVNLAGLPGISLNAGFSSTGLPLGMQLIGPRWSDAMILDMAAA 471 Query: 480 IEKE 483 + K+ Sbjct: 472 LGKK 475 >gi|311744054|ref|ZP_07717860.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Aeromicrobium marinum DSM 15272] gi|311313184|gb|EFQ83095.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Aeromicrobium marinum DSM 15272] Length = 494 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 201/474 (42%), Positives = 298/474 (62%), Gaps = 16/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 RL + D+++VE + + I+ + ++A++ V A+ A A A + D R G+ L G Sbjct: 13 RLANGDLTSVEATQASLDRIDAVDGAIHAFLHVDAEGALATARDVDARRAAGEQLPALAG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI +KD T G T S ILDG+ P Y++TV +L G ++GK NMDEFAMGSS Sbjct: 73 VPIAVKDIVTTVGQPTTCGSRILDGWVPPYDATVVSRLRAAGLPIVGKTNMDEFAMGSST 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S +GP +PW + PGGS GGS+AAVA F +IGTDTGGSIRQP + TGT Sbjct: 133 EHSAFGPTRNPWDT-----GRIPGGSGGGSAAAVAAFEVPLAIGTDTGGSIRQPGAMTGT 187 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LPVPD 252 VG+KPTYG SR G+++ A SLDQAG +TRTV D+A+L + IAG+D D+T + P Sbjct: 188 VGVKPTYGGVSRYGLVAMASSLDQAGPVTRTVLDAALLHELIAGHDPRDSTSLTAPVPPV 247 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 A + G+ +G+ +E + P + + + ++ L AGA++VE+S P+ + + Sbjct: 248 VAAARRADVAGLRIGVVRELGGEGFQPGVRDRFDEAVALLTGAGAEVVEVSCPNFVHGIA 307 Query: 313 AYYIISPAEASSNLARYDGVRYGLR-----VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 AYY++ P+E SSNLA++D +R+GLR VE ++ TR GFG EVK RI++GT Sbjct: 308 AYYLVMPSEVSSNLAKFDAMRFGLRTFPEGVEQPSAEQVMAATRDAGFGDEVKRRIILGT 367 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LSS YD++Y A+++RTLI +DF AF+Q VDV+++PT PT+A+PLG + ++ +M Sbjct: 368 YALSSGYYDAYYGSAQQVRTLIAQDFAAAFDQ-VDVLISPTAPTTAWPLGDKLDDPLAM- 425 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 DV T+ N+AG+P ISVPA L + +P+G+Q + ++ L++V +E Sbjct: 426 -YLADVATIPANLAGVPGISVPAGLAD-GLPVGVQFLAPALADDRLYNVAAALE 477 >gi|297571019|ref|YP_003696793.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Arcanobacterium haemolyticum DSM 20595] gi|296931366|gb|ADH92174.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Arcanobacterium haemolyticum DSM 20595] Length = 499 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 209/494 (42%), Positives = 298/494 (60%), Gaps = 19/494 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ E + L++ ++++VE+ ++ I+ N +MN Y+ V A A A+ D Sbjct: 1 MADLHKKTAWELAELLQAGNVTSVEITTMFLDRIDALNPKMNVYLAVDRDGALAEAQAVD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G+P+ +KD +GI T A S +LDG++P Y++TV + L + +L Sbjct: 61 ADRAAGKELPFFAGVPVALKDNMCQRGIPTTAASKMLDGWKPPYDATVVRLLKEARLPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G NMDEFAMGSS E S +GP +PW PGGS GGS+AAV+G+L ++G+D Sbjct: 121 GHTNMDEFAMGSSTEHSAFGPTQNPWGH-----NLIPGGSGGGSAAAVSGYLAPWALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG KPTYG SR GII+ A SLDQ G + R VRD+A L + I+ +D Sbjct: 176 TGGSIRQPGAMTGTVGTKPTYGAVSRYGIIAMASSLDQVGPVARDVRDAAALQEIISKHD 235 Query: 240 ECDATCV-----NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D+T + NL E A + G+T GI KE D + + + + LK Sbjct: 236 PFDSTSLTNDFSNLVAAAAEGAELGDLSGVTFGIVKELDGDGFAAGVLDAFHAIVDKLKA 295 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENT 350 AGA+ VE+S P YA+ AYY+I PAE SSNLARYDGVR+G RV EG E M T Sbjct: 296 AGAQFVEVSCPSFDYAMAAYYLIMPAEMSSNLARYDGVRFGNRVEPTEGALTSETMMAAT 355 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RI++GTY LS+ YD++Y A+++RTL++RD A+EQ VDV+LTP TP Sbjct: 356 REAGFGTEVKRRIILGTYALSAGTYDAYYGSAQRVRTLVQRDLAAAYEQ-VDVLLTPATP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T AF G++ ++ M ND+ T+ N+AG PA++VP L + +P+ Q++ F + Sbjct: 415 TVAFKFGEKLDD--PMAMYKNDMTTIPANLAGAPAMTVPIGLSD-GLPVSAQIMAPTFED 471 Query: 471 ETLFSVGQIIEKEA 484 ++ ++EK A Sbjct: 472 ARMYKAAAMVEKVA 485 >gi|78188443|ref|YP_378781.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlorobium chlorochromatii CaD3] gi|109829668|sp|Q3ATD7|GATA_CHLCH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78170642|gb|ABB27738.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlorobium chlorochromatii CaD3] Length = 474 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 200/483 (41%), Positives = 301/483 (62%), Gaps = 14/483 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + +E R++L + + E+V SY++ I+ + N +I V ++A A D+++ Sbjct: 1 MQLSSYTELREQLLAGSLRCEEVVRSYLERIDAARED-NIFITVFHERALERARMLDRKL 59 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+P+ IKD A KG S IL+ + +++TV +L A+ LGK Sbjct: 60 AEGGTVGKLFGLPMAIKDNIAMKGERLTCASKILENYESVFDATVILRLEAEDAIFLGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGSSNE S +G V +P+ DK PGGSSGGS+AAVA L ++G+DTG Sbjct: 120 NMDEFAMGSSNENSAFGNVPNPF------DKSRVPGGSSGGSAAAVAANLALVALGSDTG 173 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+RQPA F VG+KPTYGR SR G+++FA S DQ G++ RT D+A++L+ +AG DE Sbjct: 174 GSVRQPAGFCDIVGLKPTYGRISRFGLVAFASSFDQIGVLARTCGDAALVLEVMAGKDER 233 Query: 242 DATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DAT V Y +++ S +G+ +G+P+E+ D L+ + + + L++ GA++V Sbjct: 234 DATSSAHQVDSYHSMMERVSPEGLKIGVPQEFFTDALNADVARLVLATLDDLRNRGAELV 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 +I+LP + YA+ AYYI+ AEASSNLAR+DG RYG R E D+ MY N+R+ GFG+EV Sbjct: 294 DITLPDSAYAIAAYYILVTAEASSNLARFDGARYGFRTSEAADLAAMYVNSRTEGFGREV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GTYVLS+ YD++Y +A+++R + + A Q VDVI PT+P F LG + Sbjct: 354 KRRIMLGTYVLSAGYYDTYYKKAQQVRRYFQDQYRAAL-QHVDVIAGPTSPFPPFGLGDK 412 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + M DVFTV ++ G+PA+SVP +K+P+G+ L+G F E L + ++ Sbjct: 413 TGDPLEM--YLADVFTVPASIVGMPAVSVPLGFDSQKLPVGMHLVGNFFEEGKLLGIARM 470 Query: 480 IEK 482 +++ Sbjct: 471 MQR 473 >gi|73973959|ref|XP_532250.2| PREDICTED: similar to glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Canis familiaris] Length = 602 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 190/454 (41%), Positives = 267/454 (58%), Gaps = 24/454 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ I+ EL + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 133 LKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKKGHSLGDLDGI 191 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD F+T GI T S++L G+ P Y +TV QKL D GAV++GK N+DEFAMGS + Sbjct: 192 PIAVKDNFSTSGIETTCASNMLKGYVPPYNATVVQKLLDQGAVLMGKTNLDEFAMGSGST 251 Query: 135 TSYYGPVISPW---RSMDSTDKFTPGGSSGGSS------------AAVAGFLCAASIGTD 179 +GPV +PW + K G + S+ AAVA F C A++G+D Sbjct: 252 DGVFGPVKNPWSYSKQYKEKTKHKAHGENEDSNWLITGGSSGGSAAAVATFTCFAALGSD 311 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D Sbjct: 312 TGGSTRNPAAHCGVVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGMLAGHD 371 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T V PV + + + +GIPKEY LS + W + + + GAK+ Sbjct: 372 PKDSTTVQDPVKPFTLPSLTDVSKLCIGIPKEYLTPELSSEVQSLWSKAANLFESEGAKV 431 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQE 358 +E+SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF Sbjct: 432 IEVSLPHTSYSIVCYHVLCTSEVASNMARFDGLEYGHRCDIDVSTEAMYAATRREGFNDV 491 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 V+ RI+ G + L Y++++++A+K+R LI DF F GVDV+LTPTT A P Sbjct: 492 VRGRILSGNFFLLKENYENYFIKAQKVRRLIANDFVNVFNSGVDVLLTPTTLREAVPYQE 551 Query: 418 --KEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 KE+N + S +D+FT AVNMAGLPA+SVP Sbjct: 552 FIKEDNRTRSA---QDDIFTQAVNMAGLPAVSVP 582 >gi|167568304|ref|ZP_02361178.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia oklahomensis C6786] Length = 437 Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 195/431 (45%), Positives = 273/431 (63%), Gaps = 22/431 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L G+P+ KD F T+G + A S +L + +++TV +L G V LGK NMD Sbjct: 1 GVAGPLAGLPVAHKDVFVTRGWRSTAGSKMLANYTSPFDATVVARLAKAGMVTLGKTNMD 60 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSSNE S +GPV +PW + SSGGS+AAVA L A+ GTDTGGSIR Sbjct: 61 EFAMGSSNENSAFGPVKNPWDTSAVPGG-----SSGGSAAAVAARLAPAATGTDTGGSIR 115 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPASF G GIKPTYGR SR G+I+FA SLDQ G + + D A+LL A+AG+DE D+T Sbjct: 116 QPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQCAADCALLLNAMAGFDERDSTS 175 Query: 246 VNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + DY R L ++ + G+ +G+P EY L+ + + + Sbjct: 176 LERADEDYTRHLGKTWSAGADAGKPLAGLRIGLPNEYFGAGLADDVRAAIDAALKQYEAL 235 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIG 354 GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+MY+ +R+ G Sbjct: 236 GATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKSRAEG 295 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+Q DVI+ P +P+ A+ Sbjct: 296 FGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKQ-CDVIMGPASPSVAW 354 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREE 471 +G + ++ M D++T++V++AGLP +SVP K P+GLQ+IG F E Sbjct: 355 DIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQIIGNYFDEA 412 Query: 472 TLFSVGQIIEK 482 + V ++ Sbjct: 413 RMLQVADAFQR 423 >gi|300933655|ref|ZP_07148911.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium resistens DSM 45100] Length = 505 Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 203/484 (41%), Positives = 302/484 (62%), Gaps = 21/484 (4%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-- 67 +E +++ S++ISAVE+ +++ I + +NA++ V A AAA D + GD Sbjct: 27 AELAEKIHSREISAVEVTQAHLDRIGEVDGDINAFLHVSGNTALAAAATVDDALAAGDQP 86 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ +KD F T T S +L+G+ Y++TVT +L G +LGK NMDEF Sbjct: 87 TSKLAGVPLALKDVFTTTDAPTTCASKMLEGYMSPYDATVTLRLRAAGIPILGKTNMDEF 146 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S YGP +P+ + TPGGS GGSSAA+A + +IGTDTGGSIRQP Sbjct: 147 AMGSSTENSAYGPTKNPYDL-----ERTPGGSGGGSSAALAAGMAPLAIGTDTGGSIRQP 201 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D DAT Sbjct: 202 AALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHDANDATSSK 261 Query: 248 ---LPVPDYERA-LDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 PV D A + + G+ +G+ K++ R + + + + LK GA++VE+ Sbjct: 262 REVAPVVDAATAGANGDLSGVKLGVVKQFERPEAFQKGVLDAYHANLEQLKSQGAELVEV 321 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQE 358 P+ +A+ AYY+I P E SSNLAR+DG+RYG R +G D ++ TR+ GFG E Sbjct: 322 DCPNFDHAMNAYYLILPCEVSSNLARFDGMRYGQR-KGDDGTNSADQVMSLTRAEGFGDE 380 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RIM+GTY LS YD++YL+A+++R LI +DF AFE+ VD I++P TP++AF LG+ Sbjct: 381 VKRRIMLGTYALSVGYYDAYYLQAQRVRNLIAQDFASAFEK-VDAIVSPVTPSTAFKLGE 439 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVG 477 + ++ +M +++ D+FT+ +N+AG+ +SVP + +P GLQ++ +++ L+ VG Sbjct: 440 KLDDPLAM-YMF-DLFTLPLNLAGVCGMSVPGGFAADTNLPTGLQIMAGAHKDDNLYRVG 497 Query: 478 QIIE 481 E Sbjct: 498 AAFE 501 >gi|288572807|ref|ZP_06391164.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568548|gb|EFC90105.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 490 Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 208/488 (42%), Positives = 306/488 (62%), Gaps = 14/488 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ ++ ++ SA ++V S + +E+ +++A + V A A A A E D R Sbjct: 2 ELFRLSATKVASGVKDGRFSAEDVVRSCLSRMESKEPEIHAMLTVTADAAIARARELDGR 61 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G D L G+P+ +KD T G+ T S IL+ + P Y++TV + L + GAV+LGK Sbjct: 62 RSAGEDLGPLGGVPVILKDNMCTAGVKTTCASRILEKWVPPYDATVVRLLLEAGAVLLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMG S E S +G +PW + D+ PGGSSGGS+AAVA ++G+DTG Sbjct: 122 ANMDEFAMGGSTENSAFGVTSNPW----ALDR-VPGGSSGGSAAAVAAGYAPIALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G G+KPTYGR SR G+++FA SLDQ G RT D A++++ + +D Sbjct: 177 GSIRQPASFCGVYGLKPTYGRTSRYGLVAFASSLDQIGPFARTAEDVALVMEVLGVHDPM 236 Query: 242 DATCVNLPVPDYERAL-DQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +P ++ +AL + ++G +G KE DY + K + + ++AGA++ Sbjct: 237 DSTSQPVPADEFSQALAARDLKGKRIGYLKEVAEYDY-DERMKKALSEAMKACEEAGAEM 295 Query: 300 VEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 VEISL + L +YYI++PAEASSNLAR+DGVRYG + + ++E+Y TR GFG Sbjct: 296 VEISLGTAIDHGLASYYILAPAEASSNLARFDGVRYGSSSKDSESLMELYLKTRKDGFGD 355 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+ GTYVLS+ YD++YL+A+K+R +IK++F +AFE+ VD I+ P +PT AF +G Sbjct: 356 EVKRRILTGTYVLSAGFYDAYYLKAQKVRKVIKQEFAKAFEK-VDSIILPPSPTPAFKVG 414 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ +M DVFT+ VNMAGLP IS+ E+ +PLG+Q I + E+ L S Sbjct: 415 ELIDDPIAM--YMADVFTIPVNMAGLPGISINVGFSEEGLPLGVQFIAPRWGEKELLSTA 472 Query: 478 QIIEKEAG 485 ++E G Sbjct: 473 VVMEHRFG 480 >gi|283458547|ref|YP_003363177.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase A subunit [Rothia mucilaginosa DY-18] gi|283134592|dbj|BAI65357.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Rothia mucilaginosa DY-18] Length = 534 Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 219/516 (42%), Positives = 318/516 (61%), Gaps = 46/516 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN------------SQMNAYIEVV 48 M+EL + +E+ ++L S +I++VEL +++ I ++ S +NA++ + Sbjct: 1 MNELIQLTAAEAAEKLASGEITSVELTQAHLDRIAATDGAPLSDNRADGKSGLNAFLHIN 60 Query: 49 AQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 A++A A A D G + L G+PI +KD TKG T A S +L+G+ Y+ TV Sbjct: 61 AEEALATAAAVDADRAAGKELPPLAGVPIAVKDLIVTKGQPTTAASRMLEGWMSPYDGTV 120 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 T+K+ + +LGK N+DEFAMGSSNE S +G V +PW ++D PGGS GGS+AAV Sbjct: 121 TRKVREARMPILGKTNLDEFAMGSSNEHSAFGVVRNPW-ALDRA----PGGSGGGSAAAV 175 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 F ++GTDTGGSIRQPA+ TG+VG+KPTYG SR G+I+ A SLDQ G + RTV D Sbjct: 176 TAFQAPLALGTDTGGSIRQPAALTGSVGVKPTYGSVSRYGVIAMASSLDQVGPVARTVLD 235 Query: 228 SAILLKAIAGYDECDATCVNLPVPD------------YERALDQSIQGMTVGIPKEY--- 272 +A+L +AIAG+D DAT +PD E A + + G+ +G+ KE Sbjct: 236 TALLHEAIAGHDPLDATS----LPDEPGNFVEEAKAGAEAARKRDLSGLRIGVIKELGGG 291 Query: 273 RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 + + +++ + L+ AGA+I+E+SLP A+ AYY+I +E SSNLARYDGV Sbjct: 292 DGEGFEAGVLARFRESVEELRAAGAEIIEVSLPSVTEAISAYYMIMSSEVSSNLARYDGV 351 Query: 333 RYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 RYGLRV +D I + TRS GFG EVK RI++GTY LS+ +D++Y A ++RTL Sbjct: 352 RYGLRVVPEDGPVTIERVMSATRSAGFGHEVKRRIILGTYALSAGNFDAYYGAALRVRTL 411 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 I+RD+ AFE+ DV+++PT P++AF LG E+ M DV TV VN+AG+PA+S+ Sbjct: 412 IQRDYAAAFEK-CDVLISPTAPSTAFKLG-EKTEGDPMAMYLGDVATVPVNLAGVPALSL 469 Query: 449 PAALCEK-KMPLGLQLIGQPFREET-LFSVGQIIEK 482 P L E+ +P+G+Q P RE+ L+ VG +E+ Sbjct: 470 PGGLSEENNLPVGIQFTA-PAREDARLYRVGAALEE 504 >gi|25027901|ref|NP_737955.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium efficiens YS-314] gi|259506295|ref|ZP_05749197.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium efficiens YS-314] gi|39931579|sp|Q8FPZ0|GATA_COREF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|23493184|dbj|BAC18155.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium efficiens YS-314] gi|259166075|gb|EEW50629.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium efficiens YS-314] Length = 497 Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 213/492 (43%), Positives = 309/492 (62%), Gaps = 22/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL +E + S+++++ E+ +++ I + +++A++ V + A AAA+ DK Sbjct: 12 SELTTKTAAELAGLIHSREVTSREVTQAHLDRINEVDGEIHAFLHVGEEAALAAADAVDK 71 Query: 62 RIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L G+P+ +KD T T A S IL+G+ Y++TVT+KL + G +L Sbjct: 72 ALDAGEAPASALAGVPLALKDALVTTDAPTTAASKILEGYMSPYDATVTRKLREAGIPIL 131 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG +PW + TPGGS GGSSAA+A +IGTD Sbjct: 132 GKTNMDEFAMGSSTENSAYGATRNPWDL-----ERTPGGSGGGSSAALASGEAPLAIGTD 186 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D Sbjct: 187 TGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQVGPTARTVLDTALLHEVIAGHD 246 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT V+ PV A + ++G+ VG+ ++ + + + + + ++ Sbjct: 247 MFDATSVDKPVAPVVAAAREGANGDLKGVRVGVVNQFDREGYQDGVLEAFHASVEQMRSQ 306 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTR 351 GA+IVE+ PH AL AYY+I P E SSNLAR+DG+RYGLR G D E+ TR Sbjct: 307 GAEIVEVDCPHFDDALGAYYLILPCEVSSNLARFDGMRYGLR-SGDDGTRSADEVMALTR 365 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GFG EVK RI++GTY LS YD++YL+A+++RTLI +DFT AFEQ VDV+++PTTP+ Sbjct: 366 AEGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIAQDFTRAFEQ-VDVLVSPTTPS 424 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFR 469 +AF LG + + M YN D+ T+ +N+AGL +S+P+ L + +P GLQ++ F+ Sbjct: 425 TAFKLGDKITDPLEM---YNFDLCTLPLNLAGLSGMSLPSGLASDTGLPTGLQIMAPAFQ 481 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 482 DDRLYRVGAAFE 493 >gi|313679705|ref|YP_004057444.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Oceanithermus profundus DSM 14977] gi|313152420|gb|ADR36271.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Oceanithermus profundus DSM 14977] Length = 478 Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 201/475 (42%), Positives = 302/475 (63%), Gaps = 12/475 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 AV+ +R R+R+ ++ ++++ + IE ++Q++A++ + +A A AE +R+ G+ Sbjct: 3 AVTIAR-RVRTGELDPGDVLNETLARIERFDAQVHAFL-TLNPEAEAEAEAVRRRVAAGE 60 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ +KD T+G+ T S +L+GF P Y++ ++L GAV++GK N+DEF Sbjct: 61 DLPLAGVPVAVKDNLTTRGLETTCASGVLEGFVPPYDAAAVERLRAAGAVLVGKTNLDEF 120 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSS E S++GP +PW SSGGS+AAVA ++G+DTGGS+RQP Sbjct: 121 AMGSSTEHSHFGPTRNPWDLERVPGG-----SSGGSAAAVAAGYVPVAVGSDTGGSVRQP 175 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+FTGT+G KPTYGR SR G+++FA SLDQ G R+V D A + + + G+D DAT + Sbjct: 176 AAFTGTLGFKPTYGRISRYGLVAFASSLDQVGTFARSVADLARISRVLMGHDPRDATSLT 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P E ++ +G T+G+ +E + SP + ++ + L+ G + VE+ LP Sbjct: 236 AAPPRLEPDPERG-RGYTLGVVRETLQEGNSPGVLDALERFRAVLEAEGVRFVEVGLPSL 294 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++AL AYY+++ AEASSNLARYDGV YG R E D+ + TR GFG EVK RI++GT Sbjct: 295 RHALAAYYLVATAEASSNLARYDGVHYGARAEAGDVRALMRRTRERGFGAEVKRRILMGT 354 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 + LSS YD++Y RA K R I +F +AF + VD+++TPTTPT AF LG + ++ M Sbjct: 355 FALSSGYYDAYYGRALKARRRIAAEFAQAFHE-VDLLVTPTTPTPAFRLGAKLDDPLEM- 412 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +DV TVAVN+AGLPA+S+PA E+ +PLG+QLI E+ LF + + E+ Sbjct: 413 -YLSDVDTVAVNLAGLPALSLPAGF-EEGLPLGVQLIAPALAEDRLFDLAALFER 465 >gi|294661383|ref|YP_003573259.1| hypothetical protein Aasi_1917 [Candidatus Amoebophilus asiaticus 5a2] gi|227336534|gb|ACP21131.1| hypothetical protein Aasi_1917 [Candidatus Amoebophilus asiaticus 5a2] Length = 494 Score = 338 bits (868), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 192/477 (40%), Positives = 279/477 (58%), Gaps = 28/477 (5%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L+++ ++++V + I+N + +NA++ ++A A A + ++ A L G Sbjct: 29 DTLQNEPSISIDIVKQCLYNIDNQQN-LNAFVRTYDEEALATAAQVTHKLHQQKAGKLAG 87 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 + +GIKD + QA S IL+GF + +T Q+L D A+++G N DEF MGSSN Sbjct: 88 MVVGIKDLLCYQDHPVQASSKILEGFVSQFSATCVQRLVDEDAIIIGHQNCDEFGMGSSN 147 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S +GPV ++D+T PGGSSGGS+ AV +C ++GTDTGGS+RQPA+F G Sbjct: 148 ENSAFGPV---RNAIDTTR--VPGGSSGGSAVAVQADMCHVALGTDTGGSVRQPAAFCGI 202 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +G+KPTY R SR G+I++A S D GI + +RD A +L+ +AG D D+T PVP Y Sbjct: 203 IGLKPTYSRISRHGMIAYASSFDTIGIFAKDIRDCATVLEVVAGADTFDSTVSKQPVPHY 262 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG---------ISWLKDAGAKIVEISL 304 L T G K+ ++ YL T+ T Q + LK AG ++ I Sbjct: 263 SDYL-------TFG--KKAKIAYLKETLAYTGLQDEIRLHTTATMDALKQAGHQVEAIDF 313 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P +Y LP YY+++ AEAS+NLAR DGVRYG R I E+Y TRS GFGQEV+ RI Sbjct: 314 PLLEYVLPTYYVLTTAEASANLARLDGVRYGYRSPSAHTIEELYTKTRSEGFGQEVQRRI 373 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++G +VL + Y+ Y++A+KIR LIK D +A D IL PTTP++AF +G ++ Sbjct: 374 LLGAFVLGANHYEDCYIKAKKIRRLIK-DKLQAILSDYDFILLPTTPSTAFKIGFNAHDP 432 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +M + DV+T ++AGLPAIS+P + +P+GLQ+I F E L I Sbjct: 433 LAM--YWADVYTTLASVAGLPAISIPNGTDHQNLPIGLQIIANSFEETHLLGFANYI 487 >gi|255327259|ref|ZP_05368333.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Rothia mucilaginosa ATCC 25296] gi|255295539|gb|EET74882.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Rothia mucilaginosa ATCC 25296] Length = 534 Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 219/516 (42%), Positives = 317/516 (61%), Gaps = 46/516 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN------------SQMNAYIEVV 48 M+EL + +E+ ++L S +I++VEL +++ I ++ S +NA++ + Sbjct: 1 MNELIQLTAAEAAEKLASGEITSVELTQAHLDRIAATDGAPLSDNRADGKSGLNAFLHIN 60 Query: 49 AQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 A++A A A D G + L G+PI +KD TKG T A S +L+G+ Y+ TV Sbjct: 61 AEEALATAAAVDADRAAGKELPPLAGVPIAVKDLIVTKGQPTTAASRMLEGWMSPYDGTV 120 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 T+K+ + +LGK N+DEFAMGSSNE S +G V +PW ++D PGGS GGS+AAV Sbjct: 121 TRKVREARMPILGKTNLDEFAMGSSNEHSAFGVVRNPW-ALDRA----PGGSGGGSAAAV 175 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 F ++GTDTGGSIRQPA+ TG+VG+KPTYG SR G+I+ A SLDQ G + RTV D Sbjct: 176 TAFQAPLALGTDTGGSIRQPAALTGSVGVKPTYGSVSRYGVIAMASSLDQVGPVARTVLD 235 Query: 228 SAILLKAIAGYDECDATCVNLPVPD------------YERALDQSIQGMTVGIPKEY--- 272 +A+L +AIAG+D DAT +PD E A + G+ +G+ KE Sbjct: 236 TALLHEAIAGHDPLDATS----LPDEPGNFVEEAKAGAEAARKGDLSGLRIGVIKELGGG 291 Query: 273 RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 + + +++ + L+ AGA+I+E+SLP A+ AYY+I +E SSNLARYDGV Sbjct: 292 NGEGFEAGVLARFRESVEELRAAGAEIIEVSLPSVTEAISAYYMIMSSEVSSNLARYDGV 351 Query: 333 RYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 RYGLRV +D I + TRS GFG EVK RI++GTY LS+ +D++Y A ++RTL Sbjct: 352 RYGLRVVPEDGPVTIERVMSATRSAGFGHEVKRRIILGTYALSAGNFDAYYGAALRVRTL 411 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 I+RD+ AFE+ DV+++PT P++AF LG E+ M DV TV VN+AG+PA+S+ Sbjct: 412 IQRDYAAAFEK-CDVLISPTAPSTAFKLG-EKTEGDPMAMYLGDVATVPVNLAGVPALSL 469 Query: 449 PAALCEK-KMPLGLQLIGQPFREET-LFSVGQIIEK 482 P L E+ +P+G+Q P RE+ L+ VG +E+ Sbjct: 470 PGGLSEENNLPVGIQFTA-PAREDARLYRVGAALEE 504 >gi|256827598|ref|YP_003151557.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Cryptobacterium curtum DSM 15641] gi|256583741|gb|ACU94875.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Cryptobacterium curtum DSM 15641] Length = 496 Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 199/491 (40%), Positives = 295/491 (60%), Gaps = 16/491 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + +++ R+ LR + +A E+ + I IE + +NA++E + A A A++ D Sbjct: 1 MKDFACCSIATIREGLRVGEFTAREVAEQSIARIEAIDPTINAFLETTPEAALAQADQVD 60 Query: 61 KRIINGDAR---DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 I G+ L G+P+ KD KG HT S +L+ + Y +T Q++ D GA+ Sbjct: 61 AAITAGNFDTLGSLAGVPVAFKDNMNQKGTHTTCASRMLENYVSPYTATCVQQVIDAGAL 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGKLNMDEFA GS+ E+S +G +PW + PGGSSGGS+AAVA + + ++G Sbjct: 121 PLGKLNMDEFAFGSTTESSAFGTTKNPWNT-----AHVPGGSSGGSAAAVAAGMASLTLG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGSIRQP SF G V +KPTYG SR G+++F SLDQ G TRTV D+A+ L ++G Sbjct: 176 SDTGGSIRQPGSFCGVVAVKPTYGVVSRYGVVAFGSSLDQVGPFTRTVHDAAVALNVLSG 235 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D T + D+ LD+ I+GMT+GI P + LS + + L+ G Sbjct: 236 RDTKDCTSQQCTI-DFTEGLDRGIEGMTIGIVPAFMEAEGLSHEVRSAVESAAEQLRSFG 294 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGF 355 A++VE+ LPH A+ AYY++ P EA SNL+R+D VRYG R G D+ YE +R GF Sbjct: 295 AQVVEVDLPHAAAAISAYYVLGPCEAFSNLSRFDSVRYGYRDPGHTDLGSQYEASREKGF 354 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E + RIM+G+Y+LS+ YD++Y A++IRTLI +D+ +A+E+ VD IL P P +AF Sbjct: 355 GLEARRRIMLGSYLLSAGVYDTYYYPAQQIRTLITQDYKQAYEK-VDCILAPVAPRTAFR 413 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLF 474 G E ++ SM +D+FT+++N+AG +++P L E +P+G+QLI F +E + Sbjct: 414 FG-ELSDPTSM--YLSDMFTISINIAGNGGMNMPVGLGKESGLPVGVQLIAPAFHDENML 470 Query: 475 SVGQIIEKEAG 485 V +E G Sbjct: 471 RVAAALEVAYG 481 >gi|325962719|ref|YP_004240625.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Arthrobacter phenanthrenivorans Sphe3] gi|323468806|gb|ADX72491.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Arthrobacter phenanthrenivorans Sphe3] Length = 526 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 200/418 (47%), Positives = 278/418 (66%), Gaps = 16/418 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI +KD T G T A S IL+G+ Y++TV ++L +LGK N+DEFAMG Sbjct: 82 LAGVPIAVKDLIVTIGQPTTAGSRILEGWHSPYDATVVERLRAAKMPILGKTNLDEFAMG 141 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS E S YGP +PW D+ PGGS GGS+AAVA F ++GTDTGGSIRQP + Sbjct: 142 SSTEHSAYGPTRNPW----DLDRI-PGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAV 196 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TGTVG+KPTYG SR G I+ A SLDQ G ++RTV DSA+L + I G+D D+T + P+ Sbjct: 197 TGTVGVKPTYGSVSRYGAIAMASSLDQIGPVSRTVLDSALLHQVIGGHDPRDSTSLPDPL 256 Query: 251 PDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 D A +++G+ +GI KE + ++ + + LK+AGA+IVE+S P+ QY Sbjct: 257 ADLVAAAKTGNVEGLRIGIIKELHGEGYQAGVENRFHDALELLKEAGAEIVEVSCPNFQY 316 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMI 365 AL AYY+I P+EASSNLA++DGVRYGLRV +D I + TR+ GFG EVK RI++ Sbjct: 317 ALGAYYLIMPSEASSNLAKFDGVRYGLRVLPEDGPMTIERVMGATRAAGFGDEVKRRIIL 376 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++Y A+K+RTL++RDF AF DV+++PT PT+AF LG++ ++ + Sbjct: 377 GTYALSAGYYDAYYGSAQKVRTLVQRDFEAAFTV-ADVLISPTAPTTAFRLGEKLDDPLA 435 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREET-LFSVGQIIE 481 M NDV T+ N+AG+P +S+P L E +P+G+QL+ P RE+ L+ VG ++E Sbjct: 436 M--YLNDVATIPANLAGVPGLSLPGGLADEDGLPVGIQLLA-PAREDARLYRVGAVLE 490 >gi|149003533|ref|ZP_01828407.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP14-BS69] gi|147758469|gb|EDK65468.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptococcus pneumoniae SP14-BS69] Length = 446 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 186/419 (44%), Positives = 263/419 (62%), Gaps = 10/419 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD +T GI T A S +L + P +++T G +++GK NMDEFAMG Sbjct: 27 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTNMDEFAMG 86 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ETS+YG + W PGGSS GS+AAVA S+G+DTGGSIRQPA+F Sbjct: 87 GSGETSHYGATKNAWDHSK-----VPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAF 141 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYG SR G+I+F SLDQ G TV+++A+LL AIA D D+T + + Sbjct: 142 NGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAPVRI 201 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D+ + Q I+GM + +PKEY + ++P + +T + GA + E+SLPH++Y Sbjct: 202 ADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVSLPHSKYG 261 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + YYII+ +EASSNL R+DG+RYG R E ++ E+Y N+RS GFG+EVK RIM+GT+ Sbjct: 262 VAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLGTFS 321 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS YD++Y +A ++RTLI +DF + F D+IL PT P+ A+ L + N + Sbjct: 322 LSSGYYDAYYKKAGQVRTLIIQDFEKVFAD-YDLILGPTAPSVAYDL--DSLNHDPVAMY 378 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D+ T+ VN+AGLP IS+PA + +P+GLQLIG + EET++ E Y + Sbjct: 379 LADLLTIPVNLAGLPGISIPAGFSQ-GLPVGLQLIGPKYSEETIYQAAAAFEATTDYHK 436 >gi|242017331|ref|XP_002429143.1| glutamyl-tRNA amidotransferase subunit A, putative [Pediculus humanus corporis] gi|212514016|gb|EEB16405.1| glutamyl-tRNA amidotransferase subunit A, putative [Pediculus humanus corporis] Length = 496 Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 191/492 (38%), Positives = 276/492 (56%), Gaps = 19/492 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ + +L+ +++ E++ + + E ++N++I + A E S++ NG Sbjct: 5 SIKKIHGKLKGSNLNTAEVIVNSFKRAEQV-LELNSFISM-NNNAGLQVESSNEYFKNGK 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 R L EGIPI +KD F K T S +L FRP Y +TV QKL D+GA+++GK NMDE Sbjct: 63 PRSLLEGIPIAVKDNFCVKDTLTTCGSKMLQNFRPKYTATVVQKLLDSGAILVGKTNMDE 122 Query: 127 FAMGSSNETSYYGPVISPWRS-------MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 FAMGS TS +GP + W S + D F PGGSSGGS+ AVA +C ++G+D Sbjct: 123 FAMGSGTTTSIFGPTKNIWGSRFSNLCIQEKNDWFIPGGSSGGSAVAVASGICLGALGSD 182 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS R PAS+ G VG+KPTYG SR G+I S+D I+ V D+A LL + G D Sbjct: 183 TGGSCRNPASYCGIVGLKPTYGLLSRYGLIPLVNSMDVPAIMALNVEDTACLLGIMMGRD 242 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E D+T V+ + S++G+ +GIP EY LS I W L GA I Sbjct: 243 ENDSTTVSKNLNLALNYSSSSVKGLKIGIPAEYNCQGLSDEIRSAWNDIAKVLYQGGASI 302 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQE 358 V +S+PHT+Y++ Y I++ E +SN+ARYDG+ +GLR + K + Y TR GF + Sbjct: 303 VPVSMPHTKYSIVCYSILNQCEVASNMARYDGIEFGLRSKEKGNRKNSYVTTRYSGFNEV 362 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 V+ RI+ G + L S + +Y +A K+R LI DF A+ +G++++LTPTT T A Sbjct: 363 VRSRIIAGNFFLLSSNSNKYYEKALKVRRLIADDFNNAWRKGINILLTPTTLTDAPKYSE 422 Query: 416 -LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + K+E ++ D T NMAG PAIS+P L +K P+ LQL+ F E+TL Sbjct: 423 YIKKDEREQSAI----QDYCTQPANMAGCPAISIPIELSKKGFPISLQLMAPKFEEKTLL 478 Query: 475 SVGQIIEKEAGY 486 IE + Sbjct: 479 GCALYIENAVNF 490 >gi|52548277|gb|AAU82126.1| glutamyl-tRNA amidotransferase subunit A [uncultured archaeon GZfos10C7] Length = 492 Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 205/499 (41%), Positives = 309/499 (61%), Gaps = 32/499 (6%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ E +R++S D+S ++V + IE S ++NA+I + + A A E+DKR G Sbjct: 6 LSAQEVVERIKSGDVSCEDMVCRIYERIERS--ELNAFITLNKENAVEKAREADKRKNEG 63 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + R L G+P+ IKD +T GI T S IL+G+ P Y++ V + L GA+++GK NM Sbjct: 64 EYRRKKLLGVPVAIKDSISTMGIQTTCASKILEGYVPPYDAAVIEVLKREGAILIGKTNM 123 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEF MG+S ETSYYGP +P+ PGGSSGGS+AA++ ++G+DTGGSI Sbjct: 124 DEFCMGTSTETSYYGPTRNPYDLGR-----VPGGSSGGSAAAISAGETVLALGSDTGGSI 178 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF G VG+KPTYG SR G+I++A SL+Q G ++ +V D+A+LL I+ DE D T Sbjct: 179 RCPASFCGVVGLKPTYGLVSRYGLIAYANSLEQIGPMSSSVTDTALLLDVISAKDERDTT 238 Query: 245 CVNLPVPDY-------------ERALDQSI--QGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 L + + ER + I +GM +G+PKE+ ++ +SP ++K+ + Sbjct: 239 QAKLKLKNNASANYCFPGWMNAERTGSEEINVKGMRIGVPKEF-IEGVSPAVEKSVWNAV 297 Query: 290 SWLKDAGAKIVEISLP--HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEM 346 L+D+GA + EIS+ + +YAL +YYII+ +EASSNLAR+DG+RYGLR +D Sbjct: 298 HKLEDSGASVEEISMRGLNLKYALASYYIIAMSEASSNLARFDGLRYGLRTGRDEDWHTT 357 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 + R GFG+EVK RI++GTY LS+ Y +YL+A K+RT IK +F +A ++ D++ Sbjct: 358 FSGIRGKGFGEEVKRRIILGTYALSAGYYGRYYLKALKVRTRIKAEFEDALKKH-DILAM 416 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PT P AF LG+ + S+ DV TV +N+AG+P++S+P +P+GLQL+G+ Sbjct: 417 PTMPFVAFELGERIKDPLSL--YLADVNTVPINLAGVPSLSIPCGF-SNGLPIGLQLVGK 473 Query: 467 PFREETLFSVGQIIEKEAG 485 F E+T+ + E +G Sbjct: 474 HFEEDTILRAAFVFETSSG 492 >gi|296171266|ref|ZP_06852670.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894234|gb|EFG73991.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 493 Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 209/478 (43%), Positives = 306/478 (64%), Gaps = 20/478 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPI 76 K++S+VE+ + + I ++ + +A++ V A +A AA D+ + G+ L G+P+ Sbjct: 19 KELSSVEVTRACLDQIAATDERYHAFLHVAADEALGAAAVVDEAVAAGERLPSPLAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y+STVT +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTVDMPTTCGSKILEGWRSPYDSTVTTRLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW +D PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW-DLDRV----PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY--- 253 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V +PD Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDHRDSTSVEAAIPDVVGA 253 Query: 254 -ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++G+ VG+ K+ R + P + +++ + L + GA++ E+ PH +YAL Sbjct: 254 AKAGAAGDLKGVRVGVVKQLRGEGYQPGVLASFEAAVGRLTELGAEVSEVDCPHFEYALA 313 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV G D E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AYYLILPSEVSSNLARFDAMRYGLRV-GDDGTHSAEEVMALTRAAGFGPEVKRRIMIGTY 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+E VDV+++P TPT+AFPLG++ ++ +M + Sbjct: 373 ALSAGYYDAYYNQAQKVRTLIARDLDRAYES-VDVVVSPATPTTAFPLGEKVDDPLAM-Y 430 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVPA L + +P+GLQ++ ++ L+ VG E G Sbjct: 431 LF-DLCTLPLNLAGHCGMSVPAGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 487 >gi|66807555|ref|XP_637500.1| glutamyl-tRNA amidotransferase A subunit [Dictyostelium discoideum AX4] gi|74853254|sp|Q54L63|GATA_DICDI RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog gi|60465926|gb|EAL63995.1| glutamyl-tRNA amidotransferase A subunit [Dictyostelium discoideum AX4] Length = 550 Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 196/530 (36%), Positives = 299/530 (56%), Gaps = 62/530 (11%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIEN-SNSQMNAYIEVVAQKARAAA-EESDKRIING 66 +S+ R L + +LV + I+ I S + +N +I + +K+ +ES +R NG Sbjct: 7 ISKIRKSLIDGKLKVNDLVLNKIKEINKVSPNHLNTFISLQDEKSLGKQIKESQERYDNG 66 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L+GIPIG+KD F++K T S IL+ + P ++STV + L + GA+++GK NMDE Sbjct: 67 TNKRLDGIPIGVKDNFSSKNFKTTCGSKILENYIPSFDSTVVKLLKEEGAIIIGKTNMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS------------SAAVAGFLCAA 174 F+MGSS+ + ++G VI+PW ++ + ++ G +AAVA C A Sbjct: 127 FSMGSSSTSGHFGKVINPWSKPNNNNNNDNDNNNNGEVLYVAGGSSGGSAAAVASNYCVA 186 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 SIG+DTGGSIRQP+S+ G VG KP+YG SR G++++A SLD G++T V D+A LL Sbjct: 187 SIGSDTGGSIRQPSSYCGVVGFKPSYGLISRFGLVAYASSLDTPGVLTNNVEDAAELLDI 246 Query: 235 IAGYD-ECDATCV-----------------NLPVPDYERALDQSIQGMTVGIPKEYRLDY 276 + D E D+T + N+ E+ +++I+ + GIPK+Y + Sbjct: 247 LIKKDQENDSTSIEFINNNQNQNQNNGEKRNILDEFNEKLKNKNIKDLVFGIPKDYLVKE 306 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 L I W++ + ++ G K+V +SLPHT+YALPAYY+++ +EASSNL+R+DGVRYG Sbjct: 307 LDTDILNLWKEVVEEIEKRGGKVVSVSLPHTRYALPAYYLLATSEASSNLSRFDGVRYGY 366 Query: 337 RVE-----------------------GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 R E G + +MY TR+ GFG+EVK RI++GT LS Sbjct: 367 RFEEEKDENKVDNDNDDDDDVDENKIGMGLKDMYTKTRTNGFGEEVKKRIILGTMALSRS 426 Query: 374 CYDSHYLRARKIRTLIKRDFTEAF--EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY- 430 YD+ Y +A+KIR L+ DF F E VD+++TPT P+ AF ++N +Y Sbjct: 427 SYDNFYTKAQKIRRLVSDDFKNVFQGENKVDILITPTAPSPAF----KQNEKMDPIEVYV 482 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ND+ T+ N+AGLPA S+P L +P+ +QLI ++ L I Sbjct: 483 NDIMTIPSNLAGLPACSIPLKLSNSNLPISVQLISNRLTDDNLLFAAHTI 532 >gi|312892327|ref|ZP_07751822.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mucilaginibacter paludis DSM 18603] gi|311295111|gb|EFQ72285.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mucilaginibacter paludis DSM 18603] Length = 487 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 197/481 (40%), Positives = 289/481 (60%), Gaps = 11/481 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +S+ + ++ + S V LV++Y+ I+ + +NA+ EV A +A A++ D Sbjct: 11 MTKL-YYTLSDIQTAIQQGETSVVALVEAYLDNIK-TFGHLNAFNEVFADEALLLAQDVD 68 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G A L G+ I IKD KG A S IL+GF + STV ++L +++G Sbjct: 69 LKIQQGTAGRLAGMVIAIKDNICYKGHQVTASSKILEGFTSIFSSTVVERLLAEDVIIIG 128 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N DEFAMG SNETSY GPV ++ + + G S G + A AG +C A++GTDT Sbjct: 129 RCNCDEFAMGGSNETSYLGPV----KNFADETRVSGGSSGGSAVAVQAG-MCHAALGTDT 183 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPA+F G +G+KPTYGR SR G+I++A S DQAG IT+++ D+A+LL+ I+G DE Sbjct: 184 GGSVRQPAAFCGVIGLKPTYGRVSRYGLIAYASSFDQAGPITKSIEDAALLLEIISGADE 243 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DAT +LPVP Y L+ + + I + + + I L+ G + Sbjct: 244 RDATVADLPVPAYSDDLNFTGKKRIAYISEALSSNGVDVQQKDLLNAYIERLRQEGHVVE 303 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 +S Y +P YYI++ AEASSNLARYDGV YG R D+ Y+ +RS GFG+EV Sbjct: 304 PVSFDLMDYVVPTYYILTTAEASSNLARYDGVHYGYRSPNATDLESTYKRSRSEGFGKEV 363 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+GT+VLS+ YD++Y +A+KIR +I RD T D IL PT+PT AF +G++ Sbjct: 364 KRRIMLGTFVLSAGYYDAYYAKAQKIRRMI-RDRTNDILNQYDFILIPTSPTPAFEIGEQ 422 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + D+FTV ++AG+PAIS+P + +PL LQL+ + F E L + Sbjct: 423 IKD--PVVRYLADIFTVQASLAGIPAISLPLGNNTEGLPLALQLLTKSFAESDLLKFSKY 480 Query: 480 I 480 I Sbjct: 481 I 481 >gi|296140573|ref|YP_003647816.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Tsukamurella paurometabola DSM 20162] gi|296028707|gb|ADG79477.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Tsukamurella paurometabola DSM 20162] Length = 499 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 217/496 (43%), Positives = 313/496 (63%), Gaps = 20/496 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +E+ ++ ++ S D+S+VE+ +++ I + + A++ V A +A AAA D Sbjct: 10 FTEITGSTAADLAAKIASGDLSSVEVTQAHLDRIAEVDGDLGAFLHVGADQAVAAARAVD 69 Query: 61 KRIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + G+ A L G+P+ +KD F T T S IL+G+ Y++TVT KL G + Sbjct: 70 EARARGEQPASALAGVPLALKDVFTTTDAPTTCGSKILEGWTAPYDATVTAKLRAAGIPI 129 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK NMDEFAMGSS E S YG +PW + D+ TPGGS GGS+AA+A + +IGT Sbjct: 130 LGKTNMDEFAMGSSTENSAYGVTRNPW----APDR-TPGGSGGGSAAALASYEAPLAIGT 184 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIRQPAS T TVG++PTYG SR G+++ A SLDQ G RTV D+A+L + IAG+ Sbjct: 185 DTGGSIRQPASLTATVGVRPTYGAVSRYGLVACASSLDQGGPCARTVLDTALLHEVIAGH 244 Query: 239 DECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D D+T ++ VPD A + G+ VG+ KE+ + + ++++ + L+D Sbjct: 245 DPRDSTSLDAAVPDVVAAARAGAAGDLSGVRVGLVKEFGAEGTEAGVQASFEKAVQQLRD 304 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA++VE+SLP QYAL AYY+I P+E SSNLAR+D +RYGLR G D E+ T Sbjct: 305 LGAEVVEVSLPTLQYALAAYYLILPSEVSSNLARFDAMRYGLRT-GDDGTHSAEEVMALT 363 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R GFG EVK RIMIGTY LSS YD++Y A+K+RTL+ DF +A+EQ VDVI++PTTP Sbjct: 364 REAGFGPEVKRRIMIGTYALSSGYYDAYYGSAQKVRTLLAADFAKAYEQ-VDVIVSPTTP 422 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFR 469 T+AF LG++ + +M +++ D+FT+ N+AG +SVP+ L + +P+GLQ++ Sbjct: 423 TTAFTLGEKVGDPLAM-YLF-DLFTLPTNLAGHCGMSVPSGLSADDGLPVGLQILAPAQA 480 Query: 470 EETLFSVGQIIEKEAG 485 ++ L+ VG E G Sbjct: 481 DDRLYKVGAAYEAARG 496 >gi|41409143|ref|NP_961979.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium avium subsp. paratuberculosis K-10] gi|81571101|sp|Q73VG9|GATA_MYCPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|41397963|gb|AAS05593.1| GatA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 493 Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 209/481 (43%), Positives = 305/481 (63%), Gaps = 20/481 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPI 76 K++S+VE+ + + I ++ + +A++ V A +A AA D+ + G+ L G+P+ Sbjct: 19 KELSSVEVTQACLDQIAATDERYHAFLHVAADEALGAAAVVDEAVAAGERLPSPLAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL G+R Y++TVT KL G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTVDMPTTCGSKILQGWRSPYDATVTTKLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPWNV-----ERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ PVPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDIRDSTSVDAPVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++G+ VG+ K+ R + P + +++ + L GA++ E+ PH +YAL Sbjct: 254 ARAGTAGDLKGVRVGVVKQLRGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFEYALA 313 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLR+ G D E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AYYLILPSEVSSNLARFDAMRYGLRI-GDDGSHSAEEVMALTRAAGFGPEVKRRIMIGTY 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+E VDV+++P TPT+AF LG++ ++ +M + Sbjct: 373 ALSAGYYDAYYNQAQKVRTLIARDLDAAYES-VDVVVSPATPTTAFGLGEKVDDPLAM-Y 430 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 431 LF-DLCTLPLNLAGNCGMSVPSGLSPDDDLPVGLQIMAPALADDRLYRVGAAYEAARGPL 489 Query: 488 R 488 R Sbjct: 490 R 490 >gi|260904914|ref|ZP_05913236.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Brevibacterium linens BL2] Length = 500 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 206/477 (43%), Positives = 295/477 (61%), Gaps = 15/477 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + E L++ + S+VE+ +++ I + + ++I V A A+ D Sbjct: 1 MNELTTKSALELAAGLKAGEFSSVEVTQAHLDRIHATEADFGSFITVTDDLALETAKAVD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR + D L G+P+ +KD T+G+ T A S +L+ + P YESTV K+ G +L Sbjct: 61 AKRSASEDVHALAGVPVALKDLIVTEGVATTAASKMLENWVPPYESTVHNKVKAAGLPVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGS+ E S +G +PW + PGGSSGG++AA+AGF S+GTD Sbjct: 121 GKTNLDEFAMGSTTEHSAFGTTRNPWNL-----EHVPGGSSGGAAAALAGFQAPLSVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPA+FTGTVG+KPTYG SR GII+ A SLDQ G + R+V D+A L + +AG+D Sbjct: 176 TGGSVRQPAAFTGTVGVKPTYGSISRFGIIAMASSLDQVGPMGRSVADAAALHELLAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+T + PV + A S ++G +G+ K+ R + + + + AGA+ Sbjct: 236 PLDSTSLPDPVAGFVSAAQTSDLKGKKLGVIKQLRGEGYQDGVRDAFSAALDVAAAAGAE 295 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILE-MYENTRSIG 354 IVE+ P YAL AYY++ P+E SSNLARYDG+RYGLRVE G E + TR+ G Sbjct: 296 IVEVDCPSISYALDAYYLLMPSEVSSNLARYDGMRYGLRVEPESGPVTAETVMSATRAAG 355 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTY LS+ YD++Y A+KIRTL++ DF +AFE DV+++PT PT+A Sbjct: 356 FGAEVKRRIILGTYALSAGYYDAYYGSAQKIRTLVQNDFAKAFES-CDVLVSPTAPTTAL 414 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 G E S M DV T+ N+AG+P +S+PA L + +P+G Q++ P RE+ Sbjct: 415 KFGAEA-ASDPMALYLGDVATIPANLAGIPGLSLPAGLSD-GLPVGFQILA-PARED 468 >gi|297620974|ref|YP_003709111.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Waddlia chondrophila WSU 86-1044] gi|297376275|gb|ADI38105.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Waddlia chondrophila WSU 86-1044] Length = 484 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 187/478 (39%), Positives = 291/478 (60%), Gaps = 12/478 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR- 69 E RD+ +K++SA E+++ +++ IE + Q+ A++ V ++AR A+ D++ NG Sbjct: 8 ELRDKFLNKELSAQEIIEHFLRRIETYDEQIGAFLAVFHERARTCAKRLDEKRANGQPLG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIPI IKD KG + S L F+ +ESTV + L + AV++GK N+DEFAM Sbjct: 68 KLAGIPIAIKDNIHVKGELSTCASQFLTNFKAPFESTVVKLLEEEDAVIIGKTNLDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSS E S +PW TPGGSSGGS+AAV+ L ++G+DTGGSIRQPAS Sbjct: 128 GSSTENSSVKLTCNPWNLA-----CTPGGSSGGSAAAVSARLVPLALGSDTGGSIRQPAS 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPTYGR SR G+++F SLDQ G D+A++++ I + D+T + Sbjct: 183 LCGVVGYKPTYGRVSRFGLVAFGSSLDQIGPFATNTADAALIMEVIGAHCRKDSTSIPQG 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y Q++ G+ VG+P ++ D L + + LK GA +VE+ L +Y Sbjct: 243 SEAYLEKFTQTLDGLKVGVPFQFLKD-LQGESKNAFDHSLETLKANGASVVEVDLSTLKY 301 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTY 368 ++P YYI++ AEAS+NLAR+DGVRYG+R + L ++Y+ ++ +GFG+EVK RIM+GT+ Sbjct: 302 SIPVYYILATAEASTNLARFDGVRYGVRAPDAETLDQVYDRSKELGFGKEVKRRIMLGTF 361 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ D++Y +A+K+RTL+ + +AF+ D+I P + AF +G +++ + Sbjct: 362 VLSTGFQDAYYKKAQKVRTLMIEQYQKAFKD-CDLIAMPVATSGAFKIGSKKD---PLEM 417 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D++T+++N+AGLPA+S+P + +PLGLQLIG + + S +E + + Sbjct: 418 YLEDIYTISINLAGLPAVSIPNGFSDSMLPLGLQLIGPQKEDVRVLSYAHALESKTSF 475 >gi|50955065|ref|YP_062353.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648677|sp|Q6AEE8|GATA_LEIXX RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|50951547|gb|AAT89248.1| glutamyl-tRNA amidotransferase subunit A [Leifsonia xyli subsp. xyli str. CTCB07] Length = 515 Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 202/474 (42%), Positives = 304/474 (64%), Gaps = 19/474 (4%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +IS+VE +++ IE ++ ++A++ V +KA A E D R +G+ G+P+ I Sbjct: 20 EISSVEATRAHLGRIEAVDADVHAFLHVAGEKALRTAAEIDGRRASGEKLGPFAGVPVAI 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD AT + + + S IL+G+ P Y++TV +KL + V LGK NMDEFAMGSS E S Y Sbjct: 80 KDVLATNDMPSTSGSKILEGWLPPYDATVVRKLREADLVPLGKTNMDEFAMGSSTEHSAY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW + PGGS GGS+AAV+ F ++G+DTGGSIRQPA+ TG+VG+KP Sbjct: 140 GPTRNPWDL-----ERIPGGSGGGSAAAVSAFEAPLALGSDTGGSIRQPAAVTGSVGVKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY----- 253 TYG SR G I+ A SLDQ G ++RTV D+ +L IAG+D D+T + P Sbjct: 195 TYGGVSRYGAIALASSLDQVGPVSRTVLDAGLLHDVIAGHDALDSTSLTDVWPSMADAAR 254 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A + +++ + VG+ +E + + + +++ + L+ AGA+IVE+S P +YA+ A Sbjct: 255 AGAREGALRRVRVGVVRELNGEGFQAGVKQRFEESLGLLEGAGAEIVEVSAPSFEYAVAA 314 Query: 314 YYIISPAEASSNLARYDGVRYGLRV---EGKDILE-MYENTRSIGFGQEVKHRIMIGTYV 369 YY+I PAEASSNLAR+D VR+GL+V EG +E + TR GFG EVK RI++GTY Sbjct: 315 YYLILPAEASSNLARFDSVRFGLQVDPAEGPVTVERVMAATRDAGFGPEVKRRIILGTYA 374 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ YD++Y A+K+RTLI+RDF+ AFE+ VDV+++P+ PT+AF G++ ++ M Sbjct: 375 LSAGYYDAYYGSAQKVRTLIQRDFSAAFER-VDVLVSPSAPTTAFRFGEKLHD--PMAMY 431 Query: 430 YNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND+ T+ N+AG+P + +P L E +P+GLQL+ + L+++G +E+ Sbjct: 432 LNDITTIPANLAGVPGMGLPIGLAPEDGLPVGLQLMAPAHADARLYTIGAALER 485 >gi|282890547|ref|ZP_06299070.1| hypothetical protein pah_c022o138 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499544|gb|EFB41840.1| hypothetical protein pah_c022o138 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 489 Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 191/486 (39%), Positives = 294/486 (60%), Gaps = 12/486 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +++ ++ E RDR ++SA+ + ++ IE +SQ+ A++ V+ + A E D++ Sbjct: 5 DMHHLSAIEIRDRFLRGEVSAIAIAQHFLSRIEQYDSQVGAFLSVLKDRVLRKAAELDRK 64 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ L GIPIGIKD +G T S L F+ + ST L A+++GK Sbjct: 65 KAAGEKLGKLAGIPIGIKDNIHIEGEITTCASKFLTNFKAPFSSTAVALLEQEDALLIGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+DEFAMGSS E S +PW K PGGSSGGS+AAVA LC ++G+DTG Sbjct: 125 TNLDEFAMGSSTENSALQKTFNPWNL-----KCIPGGSSGGSAAAVAARLCPIALGSDTG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPAS G VG KPTYGR SR G++++ SLDQ G IT D+A++++ + + Sbjct: 180 GSIRQPASLCGVVGFKPTYGRVSRYGLVAYGSSLDQIGPITTNTADAALIMEVLGQHCTK 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T ++ DY D +++GM +G+P+++ L+ LS + ++ ++ KD GA+IV+ Sbjct: 240 DSTSLSSATEDYLHHFDGNVKGMKIGVPRQF-LEGLSAEPKEIFETSLAVFKDLGAEIVD 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVK 360 + L +Y+L YYI++ AEAS+NLAR+DG+RYG R + + + E+YE ++ GFG EVK Sbjct: 299 VDLDILKYSLAVYYILATAEASTNLARFDGIRYGHRSAKAQTLDEVYELSKEEGFGSEVK 358 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTYVLS+ D++Y +A+K+RTL+ + F EAF Q D++ TP P +AF G + Sbjct: 359 RRIILGTYVLSAGFQDAYYRKAQKVRTLMLQKFKEAF-QLCDLVATPVCPCAAFEAGAIK 417 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + D++T++ N+AG+PAIS+P+ + PLGLQLIG + + Sbjct: 418 T---PLEMYLEDIYTISSNLAGVPAISIPSGFTQDHKPLGLQLIGPQKHDVAVLHAANAF 474 Query: 481 EKEAGY 486 E+ Y Sbjct: 475 ERVTNY 480 >gi|323359743|ref|YP_004226139.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] gi|323276114|dbj|BAJ76259.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] Length = 506 Score = 335 bits (860), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 207/490 (42%), Positives = 303/490 (61%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + +E +L S ++S+VE +++ I + ++A++ V AA+ Sbjct: 1 MSDLTRLTAAELAAKLSSSEVSSVEATRAHLDRIAAVDGDVHAFLHVSDHALEVAADIDR 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R +L G+P+ +KD T + + + S IL+G+ Y++TV + G V LG Sbjct: 61 RRAAGEQLHELAGVPLAVKDVLVTTDMPSTSGSKILEGYMSPYDATVVARSRAAGLVPLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S YGP +PW D+ PGGS GGS+AAVA F ++G+DT Sbjct: 121 KTNMDEFAMGSSTEFSAYGPTRNPW----DLDRI-PGGSGGGSAAAVAAFEAPLALGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA TGTVG+KPTYG SR G I+ A SLDQ G +TRTV D+ +L I G+D Sbjct: 176 GGSIRQPAHVTGTVGVKPTYGGVSRYGAIALASSLDQVGPVTRTVLDAGLLHDVIGGHDA 235 Query: 241 CDATCVNLPVPDY-----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D+T ++ P + E A Q + G+ VG+ +E + +++ ++ ++ Sbjct: 236 NDSTSLSDAWPSFAAAAREGATGQILTGLKVGVIRELDDRGFQKGVSDSFRASLAAMEAQ 295 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRS 352 GA+IVEIS PH +Y + AYY+I PAEASSNLA++D VR+GLRV +G +E + TR Sbjct: 296 GAEIVEISAPHFEYGVAAYYLILPAEASSNLAKFDSVRFGLRVNPQGAATVENVMAATRD 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LS+ YD++Y A+K+RTLI++DF AF Q VDVI TP+ PT+ Sbjct: 356 AGFGPEVKRRIILGTYALSAGYYDAYYGSAQKVRTLIQQDFDAAFAQ-VDVIATPSAPTT 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREE 471 AF LG++ ++ M NDV T+ N+AG+P IS+P+ L E+ +P+G+Q + ++ Sbjct: 415 AFRLGEKIDDPLQM--YLNDVTTIPANLAGVPGISIPSGLAEEDGLPVGIQFLAPARQDA 472 Query: 472 TLFSVGQIIE 481 L+ VG +E Sbjct: 473 RLYRVGAALE 482 >gi|118462655|ref|YP_883022.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium avium 104] gi|254776280|ref|ZP_05217796.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium avium subsp. avium ATCC 25291] gi|166217685|sp|A0QJD4|GATA_MYCA1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118163942|gb|ABK64839.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium avium 104] Length = 493 Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 208/481 (43%), Positives = 303/481 (62%), Gaps = 20/481 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPI 76 K++S+VE + + I ++ + +A++ V A +A AA D+ + G+ L G+P+ Sbjct: 19 KELSSVEATQACLDQIAATDERYHAFLHVAADEALGAAAVVDEAVAAGERLPSPLAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL G+R Y++TVT KL G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTVDMPTTCGSKILQGWRSPYDATVTTKLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPWNV-----ERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY--- 253 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ PVPD Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDIRDSTSVDAPVPDVVGA 253 Query: 254 -ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++G+ VG+ K+ R + P + +++ + L GA++ E+ PH +YAL Sbjct: 254 ARAGAAGDLKGVRVGVVKQLRGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFEYALA 313 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLR+ G D E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AYYLILPSEVSSNLARFDAMRYGLRI-GDDGSHSAEEVMALTRAAGFGPEVKRRIMIGTY 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+E VDV+++P TPT+AF LG++ ++ +M + Sbjct: 373 ALSAGYYDAYYNQAQKVRTLIARDLDAAYES-VDVVVSPATPTTAFGLGEKVDDPLAM-Y 430 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 431 LF-DLCTLPLNLAGHCGMSVPSGLSPDDDLPVGLQIMAPALADDRLYRVGAAYEAARGPL 489 Query: 488 R 488 R Sbjct: 490 R 490 >gi|68536396|ref|YP_251101.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium jeikeium K411] gi|260577526|ref|ZP_05845466.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium jeikeium ATCC 43734] gi|109829681|sp|Q4JUM4|GATA_CORJK RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|68263995|emb|CAI37483.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Corynebacterium jeikeium K411] gi|258604330|gb|EEW17567.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium jeikeium ATCC 43734] Length = 500 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 201/492 (40%), Positives = 305/492 (61%), Gaps = 21/492 (4%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +E +++ +++IS+ E+ +++ I + ++A++ V A +A AAA D Sbjct: 14 SDFTTWTAAELAEKIHAREISSQEVTQAHLDRIGEIDGDIHAFLHVGADEALAAASNVDD 73 Query: 62 RIINGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + GD L G+P+ +KD F T T S +L+G+ Y++TVT +L G +L Sbjct: 74 ALAAGDQPTSKLAGVPLALKDVFTTTDAPTTCASKMLEGYMSPYDATVTMRLRAAGIPIL 133 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S YG +P+ + TPGGS GGSSAA+A + +IGTD Sbjct: 134 GKTNMDEFAMGSSTENSAYGATKNPYDL-----ERTPGGSGGGSSAALAAGMAPLAIGTD 188 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+ T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 189 TGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHD 248 Query: 240 ECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKD 294 D+T + V A Q + G+ +G+ K++ + + P + +T+ + LK Sbjct: 249 ANDSTSSSHAVAPVVEAAKQGASGDLSGVKLGVVKQFEKAEAFQPGVLETYHANLEQLKS 308 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENT 350 GA++VE+ P+ +AL AYY+I P E SSNLAR+DG+RYG R G D ++ T Sbjct: 309 QGAELVEVDCPNFDHALNAYYLILPCEVSSNLARFDGMRYGQR-RGDDGTRSADQVMSLT 367 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG EVK RIM+GTY LS YD++YL+A+++R LI +DF +A+EQ VD I+ P TP Sbjct: 368 RAEGFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRNLISQDFAKAYEQ-VDAIVAPVTP 426 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFR 469 ++AF LG++ ++ +M +++ D+FT+ +N+AG+ +SVP + +P GLQ++G Sbjct: 427 STAFKLGEKVDDPLAM-YMF-DLFTLPLNLAGVCGMSVPGGFASDSGLPTGLQIMGPAHG 484 Query: 470 EETLFSVGQIIE 481 ++ L+ VG E Sbjct: 485 DDRLYRVGAAFE 496 >gi|254818485|ref|ZP_05223486.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium intracellulare ATCC 13950] Length = 493 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 207/478 (43%), Positives = 307/478 (64%), Gaps = 20/478 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPI 76 K++S+VE+ + + IE ++ + +A++ V A +A AA D+ + G+ L G+P+ Sbjct: 19 KELSSVEVTQACLDQIEATDDRYHAFLHVAADEALGAAAVVDEAVAAGERLPSPLAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++TVT +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTVDMPTTCGSKILEGWRAPYDATVTSRLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IGTDTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NVDRV-PGGSGGGSAAALAAFQAPLAIGTDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY--- 253 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDTRDSTSVDAAVPDVVGA 253 Query: 254 -ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++G+ VG+ K+ R + P + +++ + L GA++ E+ PH ++AL Sbjct: 254 ARAGAAGDLKGVRVGVVKQLRGEGYQPGVLTSFEAAVEQLTALGAEVSEVDCPHFEHALS 313 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLR+ G D E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AYYLILPSEVSSNLARFDAMRYGLRI-GDDGSHSAEEVMALTRAAGFGPEVKRRIMIGTY 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD EA+ + VDV+++P TPT+AF LG++ ++ +M + Sbjct: 373 ALSAGYYDAYYNQAQKVRTLIARDLDEAY-RSVDVVVSPATPTTAFGLGEKVDDPLAM-Y 430 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 431 LF-DLCTLPLNLAGHCGMSVPSGLSPDDDLPVGLQIMAPALADDRLYRVGAAYEAARG 487 >gi|332665243|ref|YP_004448031.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Haliscomenobacter hydrossis DSM 1100] gi|332334057|gb|AEE51158.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Haliscomenobacter hydrossis DSM 1100] Length = 478 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 187/478 (39%), Positives = 278/478 (58%), Gaps = 12/478 (2%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F +++ +D ++S + VE+VD Y++ I + +N Y+EV A++A A + +++ Sbjct: 4 FSTLTQVQDAIQSGATTLVEVVDHYLEKIHEYQA-LNIYVEVFAEEALEKAHQLEQKYRE 62 Query: 66 GDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 A+ L G + IKD +G A S IL+GF+ + +T ++L A+++G+ N Sbjct: 63 NPAQVGRLFGAVVSIKDVICYQGHTVTAGSKILEGFQSLFSATAVERLLAEDAIIIGRTN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 DEFAMGS+NETSYYGPV + D T PGGSSGG++ AV C S+GTDTGGS Sbjct: 123 CDEFAMGSTNETSYYGPV---RNAADPTK--VPGGSSGGAAVAVQADTCLISLGTDTGGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQPA+ G +G+KP+YGR SR G++++ S DQ GI+ +V+D A+ L+ +AG D+ DA Sbjct: 178 VRQPAALCGVIGMKPSYGRISRHGLLAYGSSFDQVGILGHSVQDIALTLEIVAGKDDFDA 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T VP Y + L+ L P I + I WLK G + + Sbjct: 238 TTTQGLVPPYSQMLEFKGPVKVAYFDTAVNHPSLDPGIRAHCLRMIEWLKAQGHTVESVP 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHR 362 + Y +PAYY+++ AEASSNL+RYDG+R+G R L E Y+ +R+ GFG+EVK R Sbjct: 298 FDYLDYIIPAYYVLTTAEASSNLSRYDGIRFGYRSPNTQTLEETYKKSRTEGFGREVKRR 357 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G +VLSS YD++Y +A+K+R LI D T A D +L P PT A+ LG+ + Sbjct: 358 IMLGAFVLSSGYYDAYYTKAQKVRRLIS-DQTNAIFAEYDFLLMPAAPTPAWGLGESLED 416 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +M D+FTV NM G+P I++P E +P+GLQ + +E L + Q I Sbjct: 417 PVAM--YLADIFTVQANMVGIPGIALPVGTHETGLPVGLQFMAGKLKEAELLAFAQQI 472 >gi|163840035|ref|YP_001624440.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Renibacterium salmoninarum ATCC 33209] gi|189045258|sp|A9WPN2|GATA_RENSM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|162953511|gb|ABY23026.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Renibacterium salmoninarum ATCC 33209] Length = 520 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 213/498 (42%), Positives = 309/498 (62%), Gaps = 26/498 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEES 59 M+EL ++ + +L S ++++V++ +Y+ I + ++NA++ + A++A R AAE Sbjct: 1 MTELIKLSAAALAAKLASGEVTSVQVTQAYLDRIALVDGELNAFLHLNAEEALRVAAEVD 60 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + +L G+PI IKD TKG T A S IL+G+ Y++TV +K+ +L Sbjct: 61 ADRAAGKELHELAGVPIAIKDLIVTKGQPTTAGSKILEGWISPYDATVIEKIRAAKMPIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+DEFAMGSS E S +GP +PW D T PGGS GGS+AAVA F ++GTD Sbjct: 121 GKTNLDEFAMGSSTEHSAFGPTRNPW---DLTR--IPGGSGGGSAAAVAAFEAPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQP + TGTVG+KPTYG SR G I+ A SLDQ G ++RTV D+A+L + I G+D Sbjct: 176 TGGSIRQPGAVTGTVGVKPTYGGVSRYGAIAMASSLDQIGPVSRTVLDAALLQEVIGGHD 235 Query: 240 ECDATCVNLPV---------PDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 D+T + P+ D R + + G+ +G+ KE + ++ +++ + Sbjct: 236 PKDSTSLVDPINGQTGCTGLADAARLGANGDLTGVRIGVVKELGGEGYQEGVEVRFRESL 295 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILE 345 L+ AGA+IVE+S P YAL AYY+I P+EASSNLA++DGVR+GLR +D I Sbjct: 296 ELLRGAGAEIVEVSCPSFGYALGAYYLIMPSEASSNLAKFDGVRFGLRKLPEDGPMTIER 355 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 + TR+ GFG EVK RI++G Y LS+ YD++Y A+K RTLI+RDF AF Q DV++ Sbjct: 356 VMSATRAAGFGNEVKRRIILGAYALSAGYYDAYYGSAQKFRTLIQRDFEAAFAQ-ADVLI 414 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLI 464 +PT PT+AF G E + + NDV T+ N+AG+P +S+P L E +P G+QL+ Sbjct: 415 SPTAPTTAFKFG--EKMADPLAMYLNDVATIPANLAGVPGMSLPNGLADEDGLPSGIQLL 472 Query: 465 GQPFREETL-FSVGQIIE 481 P RE+ L + VG +E Sbjct: 473 A-PAREDALMYRVGAALE 489 >gi|118617532|ref|YP_905864.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium ulcerans Agy99] gi|166217688|sp|A0PPX4|GATA_MYCUA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118569642|gb|ABL04393.1| glutamyl-tRNA (Gln) amidotransferase (subunit A), GatA [Mycobacterium ulcerans Agy99] Length = 493 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 205/478 (42%), Positives = 306/478 (64%), Gaps = 20/478 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPI 76 K++SA EL + + IE ++ + +A++ + A +A +AA D + G+ L G+P+ Sbjct: 19 KEVSATELTQACLDQIEATDDRYHAFLHIGAHEALSAAAAVDTALAAGERLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTVDMPTTCGSKILEGWRSPYDATLTLRLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A + +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAYQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T + +PD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTAMLHQVIAGHDAKDSTSLETEIPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++G+ +G+ K+ R D P + +++ ++ L GA++ E+ PH +AL Sbjct: 254 AKAGASGDLRGVRIGVVKQLRGDGYQPGVLASFEAAVAQLTALGAEVSEVDCPHFDHALA 313 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLR+ G D E+ TR+ GFG EVK RIMIG Y Sbjct: 314 AYYLILPSEVSSNLARFDAMRYGLRI-GDDGTHSAEEVMAMTRAAGFGPEVKRRIMIGAY 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+KIRTLI RD EA+ Q VDV+++P TPT+AFPLG++ ++ +M + Sbjct: 373 ALSAGYYDAYYNQAQKIRTLIARDLDEAY-QSVDVLVSPATPTTAFPLGEKVDDPLAM-Y 430 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 431 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 487 >gi|99032571|pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 181/414 (43%), Positives = 270/414 (65%), Gaps = 11/414 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+ IKD T G T S IL+ + +++TV +K + G V++GK N+DEFA GSS Sbjct: 61 GIPVAIKDNILTLGXRTTCASRILENYESVFDATVVKKXKEAGFVVVGKANLDEFAXGSS 120 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + P +PW + PGGSSGGS+AAV+ A++G+DTGGS+RQPAS G Sbjct: 121 TERSAFFPTRNPWDL-----ERVPGGSSGGSAAAVSAGXVVAALGSDTGGSVRQPASLCG 175 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPTYG SR G+++FA SLDQ G IT+TVRD+AIL + I+G DE DAT VN V D Sbjct: 176 VVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILXEIISGRDENDATTVNRKV-D 234 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + +++ + G +P+E + + + +++ + L+ GAK+ + +PH +Y++ Sbjct: 235 FLSEIEEGVSGXKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVA 294 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+PAEASSNLAR+DGV+YGLR++ K + E Y TR++GFG+EV+ RI IGT+ LS+ Sbjct: 295 TYYVIAPAEASSNLARFDGVKYGLRIKEKGLREXYXKTRNVGFGEEVRRRIXIGTFTLSA 354 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 Y++++ +A K+R I + E Q D ILTPT+P +AF +G+ ++ + + D Sbjct: 355 AYYEAYFNKAXKVRRKISDELNEVLSQ-YDAILTPTSPVTAFKIGEIKD---PLTYYLXD 410 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +FT+ N+AGLPAISVP +P+G+Q+IG+ F + +F + + IEK + Y Sbjct: 411 IFTIPANLAGLPAISVPFGFS-NNLPVGVQVIGRRFADGKVFRIARAIEKNSPY 463 >gi|118472463|ref|YP_886708.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] gi|118173750|gb|ABK74646.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] Length = 494 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 204/482 (42%), Positives = 303/482 (62%), Gaps = 20/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLE 72 ++ +K++S+ E+ +++ I ++ + +A++ V A A A A D + G+ L Sbjct: 16 KIAAKEVSSTEVTQAHLDQIAATDDRFHAFLHVAADSALAEAARVDAAVAAGEQLPSPLA 75 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD F T + T S IL+G++ Y++TVT KL G +LGK NMDEFAMGSS Sbjct: 76 GVPLALKDVFTTTDMPTTCGSKILEGWQSPYDATVTVKLRAAGIPILGKTNMDEFAMGSS 135 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S YGP +PW + + PGGS GGS+AA+A + +IG+DTGGSIRQPA+ T Sbjct: 136 TENSAYGPTRNPWNT-----ERVPGGSGGGSAAALAAYQAPLAIGSDTGGSIRQPAALTA 190 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 TVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L IAG+D D+T V VPD Sbjct: 191 TVGVKPTYGTVSRYGLIACASSLDQGGPCARTVLDTALLHAVIAGHDARDSTSVKADVPD 250 Query: 253 YERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 A ++G+ VG+ K+ R D P + +++ + L GA++ E+ PH Sbjct: 251 VVAAARAGATGDLKGVRVGVVKQLRGDGYQPGVLQSFNAAVEQLTALGAEVTEVDCPHFD 310 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIM 364 +A+ AYY+I P+E SSNLAR+D +R+GLRV G D E+ TR+ GFG EVK RIM Sbjct: 311 HAMAAYYLILPSEVSSNLARFDAMRFGLRV-GDDGTHSAEEVMALTRAAGFGPEVKRRIM 369 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTY LS+ YD++Y +A+K+RTLI RD A+E VDV+++P TPT+AF LG++ ++ Sbjct: 370 IGTYALSAGYYDAYYNQAQKVRTLIARDLDRAYEN-VDVLVSPATPTTAFGLGEKVDDPL 428 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E Sbjct: 429 AM-YLF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAA 486 Query: 484 AG 485 G Sbjct: 487 RG 488 >gi|320333783|ref|YP_004170494.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus maricopensis DSM 21211] gi|319755072|gb|ADV66829.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus maricopensis DSM 21211] Length = 483 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 200/497 (40%), Positives = 288/497 (57%), Gaps = 30/497 (6%) Query: 4 LNFMAVSESRD----RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 ++F A ++R+ R R +D++ L ++ Q +E+ + A I +ARA A E Sbjct: 1 MHFSATQQAREVRAGRARPEDLTEQALQEA--QRLEH----LGALISRRDDEARADASEV 54 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ G+ L G+P+ IKD +G HT S L G+ Y +T Q+L GAV++ Sbjct: 55 AARVARGEHLPLAGVPVVIKDNLNLQGTHTTCGSRALGGYVSPYTATAVQRLRAAGAVII 114 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E+ +G +PW PGGSSGGS+ AVA + S+G+D Sbjct: 115 GKANMDEFAMGSSTESGAFGRARNPW-----DPARVPGGSSGGSAVAVASGMVPLSLGSD 169 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPA+FTG G KPTYGR SR G++++A SLDQ G R D A ++ IAG+D Sbjct: 170 TGGSVRQPAAFTGVYGFKPTYGRVSRYGLVAYASSLDQVGPFARHAEDLATVMDVIAGHD 229 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + P P + AL ++G +E L+ + + T ++ + L+ AGA + Sbjct: 230 PRDGTSLQAP-PAFTSALGLELRGKRFAFIRE-SLEGNTAGVMATLERTRALLEGAGATV 287 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN---TRSIGFG 356 E+SLP +Y + AYY+I+ EASSNLARYDG+ Y R D+ EM ++ +R FG Sbjct: 288 AEVSLPTLKYGIAAYYLIATPEASSNLARYDGMVYSHR--NPDVPEMVQSMSVSRGEAFG 345 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI++GTY LSS YD++Y +A ++R LI ++F AFEQ D ++TPT+P AF Sbjct: 346 AEVKRRILMGTYALSSGYYDAYYSKAMRVRRLIAQEFAGAFEQ-FDALITPTSPFPAFRR 404 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK---MPLGLQLIGQPFREETL 473 G+ + +M DV TV VN+AG+PAISVP + + +P+G+Q I P +E L Sbjct: 405 GERSQDPLAM--YAADVDTVPVNLAGVPAISVPMGTEQVEGVDLPIGMQFIAAPLADEQL 462 Query: 474 FSVGQIIE--KEAGYFR 488 + +E E Y R Sbjct: 463 VGLAYALEGLTEGEYLR 479 >gi|183981715|ref|YP_001850006.1| glutamyl-tRNA (Gln) amidotransferase (subunit A), GatA [Mycobacterium marinum M] gi|229486004|sp|B2HIF7|GATA_MYCMM RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|183175041|gb|ACC40151.1| glutamyl-tRNA (Gln) amidotransferase (subunit A), GatA [Mycobacterium marinum M] Length = 493 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 204/478 (42%), Positives = 306/478 (64%), Gaps = 20/478 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPI 76 K++SA EL + + IE ++ + +A++ + A +A +AA D + G+ L G+P+ Sbjct: 19 KEVSATELTQACLDQIEATDDRYHAFLHIGAHEALSAAAAVDTALAAGERLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTVDMPTTCGSKILEGWRSPYDATLTLRLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A + +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAYQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T + +PD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTAMLHQVIAGHDAKDSTSLETEIPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++G+ +G+ K+ R D P + +++ ++ L GA++ E+ PH +AL Sbjct: 254 AKAGASGDLRGVRIGVVKQLRGDGYQPGVLASFEAAVAQLTALGAEVSEVDCPHFDHALA 313 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLR+ G D E+ TR+ GFG EVK RIMIG Y Sbjct: 314 AYYLILPSEVSSNLARFDAMRYGLRI-GDDGTHSAEEVMAMTRAAGFGPEVKRRIMIGAY 372 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD EA+ Q VDV+++P TPT+AFPLG++ ++ +M + Sbjct: 373 ALSAGYYDAYYNQAQKVRTLIARDLDEAY-QSVDVLVSPATPTTAFPLGEKVDDPLAM-Y 430 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 431 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 487 >gi|322378603|ref|ZP_08053041.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter suis HS1] gi|322380105|ref|ZP_08054359.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter suis HS5] gi|321147475|gb|EFX42121.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter suis HS5] gi|321148963|gb|EFX43425.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter suis HS1] Length = 468 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 178/414 (42%), Positives = 263/414 (63%), Gaps = 11/414 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD +G S IL G++ Y +T L NG G+ NMDEFAMGS+ Sbjct: 58 GVPILIKDNINVEGWEITCASRILQGYKAPYSATAIINLQQNGMCAFGRGNMDEFAMGST 117 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +E+S+YGPV +P GGSSGG ++AVAG L A++G+DTGGSIRQPAS+ G Sbjct: 118 SESSFYGPVKNPKDLAR-----VAGGSSGGCASAVAGGLAIAALGSDTGGSIRQPASYCG 172 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+++++ SLDQ G +T+ V D A+LL AI+GYD D+T L P Sbjct: 173 CVGLKPTYGRVSRYGLVAYSSSLDQIGPLTQNVEDCALLLDAISGYDPHDSTSAKLENPL 232 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L++ + + +G+ Y L+ S + + L+ G IV + +++A+ Sbjct: 233 TFKNLNKE-RRLKIGVLNNY-LEEASEAVRIAYFDTAHLLEQMGHTIVHQEITDSKHAIA 290 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 AYY++S AEASSNLAR+DGVRYG R + ++ E+Y +RS GFG EVK RI++G +VLSS Sbjct: 291 AYYVLSTAEASSNLARFDGVRYGRRAQAHNLKELYIKSRSEGFGAEVKRRIILGNFVLSS 350 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 +D++YL+A++ R IK ++ + F++ VDVIL P P A K ++ + +D Sbjct: 351 GYFDAYYLKAKQARAFIKAEYNKLFKE-VDVILAPVAPDIA---PKFNAHTSPLQMYLSD 406 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 V+TV VN+AGLPA+S+P A ++ +P+G+QLIG+ F E+ + V +E+E + Sbjct: 407 VYTVGVNLAGLPALSLPVAQSKEGLPIGMQLIGRAFAEQDILDVAFGLEEEVDF 460 >gi|332025753|gb|EGI65911.1| Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein [Acromyrmex echinatior] Length = 520 Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 192/471 (40%), Positives = 261/471 (55%), Gaps = 23/471 (4%) Query: 41 MNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +N YI V AR A +D+R N L+GIPI +KD + KG T S +L F Sbjct: 40 LNPYINVTDDVAREQASSADERQQKNSLLGQLDGIPIAVKDNYCVKGKPTTCASRMLANF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-------------- 145 P Y +TV +KL G V++GK N+DEFAMGS S YGP + W Sbjct: 100 SPGYNATVYEKLRTQGVVLIGKTNLDEFAMGSGTVDSLYGPTKNLWGSEVLSQFYSYGSD 159 Query: 146 ------RSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 R + D + GGSSGGS+ AVA C A++G+DTGGS R PAS+ G VG+KP Sbjct: 160 DSQITTRKLHKKDAWRIAGGSSGGSAVAVATGTCYAALGSDTGGSTRNPASYCGLVGLKP 219 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+I S+D GI+ RTV D ++L AIAG D+ D T V + Sbjct: 220 TYGLVSRYGLIPLLNSMDVPGILGRTVDDVVLILNAIAGPDQADPTTVQREYVPINLSET 279 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 I + +GIPKEY + +S I + W++ LK+AGA +V +SLPHT Y++ Y +++ Sbjct: 280 IDISNLRIGIPKEYGVQGISEEIAECWEKVSCLLKEAGASVVPVSLPHTDYSIVCYSVLN 339 Query: 319 PAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 + +SNLA YDG+ YG R E E+Y+ TRS GF VK RI++G Y L + Y+ Sbjct: 340 RCDVTSNLACYDGIEYGHRANEWSSAHELYKKTRSEGFNDVVKGRILVGNYFLLAENYEK 399 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +Y++A K+R LI +DF + VD+ILTPTT T A + + D T Sbjct: 400 YYVKAMKMRRLITQDFDVLWNSNVDLILTPTTLTEAPRYDEFVQLDNQTQCLIQDHCTQP 459 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 NMAGLPAI+VP L K+PL LQL+ F E+ L +V + IE+ + R Sbjct: 460 ANMAGLPAINVPIKLSRNKLPLSLQLMAPLFHEQRLLTVAKWIEQTVRFPR 510 >gi|119356238|ref|YP_910882.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlorobium phaeobacteroides DSM 266] gi|166217660|sp|A1BDI1|GATA_CHLPD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|119353587|gb|ABL64458.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlorobium phaeobacteroides DSM 266] Length = 476 Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 201/481 (41%), Positives = 298/481 (61%), Gaps = 12/481 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++F + + R L + + E+ SY++ I+ + N ++ V ++A + A D+R Sbjct: 1 MHFSSYQDLRSSLLAGQTTCEEVTKSYLERIDR-HCDDNIFLAVFHEQALSRARSLDRRF 59 Query: 64 INGDARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+P+ IKD + KG S IL+ + Y++TV ++L + AV +GK Sbjct: 60 SEGGTPGLLFGMPMAIKDNISIKGARLTCASRILENYESVYDATVIERLLNEDAVFIGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S +GPV +P+ D T PGGSSGGS+AAVA L ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAFGPVANPF---DKTR--VPGGSSGGSAAAVAAGLALVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F VG+KPTYGR SR G+++FA S DQ G++ R D+A++L +AG DE D Sbjct: 175 SVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLARNSDDAALVLGVMAGADERD 234 Query: 243 ATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT V +Y E S G+ +G+PKE+ + L+P + + + + L++ GA++V+ Sbjct: 235 ATSSRHAVSNYAEEMAAVSPDGLKIGVPKEFFHESLNPDVARLVKAKLEELREKGAELVD 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVK 360 I+LP + YA+ AYYI+ AEASSNLAR+DG RYG R D L MY N+R+ GFG+EVK Sbjct: 295 ITLPASDYAIAAYYILVTAEASSNLARFDGARYGYRSPNCDNLSAMYVNSRTEGFGKEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R + + + EA E+ VDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRVFQDRYREALEK-VDVIAGPTSPFPPFGIGDKM 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ M DVFTV ++ G+PAISVP +P+G+ LI F E L + ++ Sbjct: 414 DDPLEM--YLADVFTVPASIVGMPAISVPIGYDSLNLPVGMHLICNFFEEGKLLGIAGLM 471 Query: 481 E 481 + Sbjct: 472 Q 472 >gi|78187603|ref|YP_375646.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlorobium luteolum DSM 273] gi|109891966|sp|Q3B228|GATA_PELLD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78167505|gb|ABB24603.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlorobium luteolum DSM 273] Length = 485 Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 197/482 (40%), Positives = 291/482 (60%), Gaps = 12/482 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + R RL S ++ + Y+ I S+ N YI V +A A D ++ Sbjct: 1 MQFSSYEDLRSRLLSHAVTCEAVARHYLDRIR-SHEGDNIYITVFENEALQRARSLDLKL 59 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+P+ IKD + KG S +L+G+ Y++T +L A+ LGK Sbjct: 60 AGGGTPGRLFGMPMAIKDNISMKGAPLTCASKMLEGYTSVYDATAVLRLEAEDAIFLGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMGSSNE S +GPV +P+ ++ PGGSSGGS+AAVA L ++G+DTGG Sbjct: 120 NMDEFAMGSSNENSAFGPVPNPF-----DNQRVPGGSSGGSAAAVAAGLAMVALGSDTGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+RQPA F VG+KPTYGR SR G+++FA S DQ G++ D+A++L+ +AG D D Sbjct: 175 SVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLALNCDDAALVLEVMAGVDGKD 234 Query: 243 ATCVNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT PVP Y + D S++G+ +G+P+E+ + L+P + + + L+ GA++V Sbjct: 235 ATSSAHPVPAYAAEMTDVSLKGLRIGVPEEFFNESLNPDVASVVRAKLEELRLQGAELVN 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVK 360 ++LP + YA+ AYYI+ AEASSNLAR+DG RYG R E D L MY +R+ GFG EVK Sbjct: 295 LTLPQSDYAIAAYYILVTAEASSNLARFDGARYGYRSEAADDLSSMYVKSRTEGFGAEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIM+GTYVLS+ YD++Y +A+++R L + + EA +GVDVI PT+P F +G + Sbjct: 355 RRIMLGTYVLSAGYYDTYYKKAQQVRRLFQDRYREAL-KGVDVIAGPTSPFPPFGIGDKT 413 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M DVFTV ++ G+PA+SVP +P+G+ LI F E + + + + Sbjct: 414 ADPLEM--YLADVFTVPASIVGMPALSVPVGYDSLGLPVGIHLICNFFEEGKMLGIARHM 471 Query: 481 EK 482 ++ Sbjct: 472 QR 473 >gi|183221116|ref|YP_001839112.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911207|ref|YP_001962762.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|229485891|sp|B0S8V3|GATA_LEPBA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485892|sp|B0SRP1|GATA_LEPBP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|167775883|gb|ABZ94184.1| Amidase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779538|gb|ABZ97836.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 488 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 201/484 (41%), Positives = 299/484 (61%), Gaps = 11/484 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L F+ SE + RL +S+ ELV +Y++ I +S++ A++E+ +K A+ESD Sbjct: 1 MKDLIFLTYSEIKKRLNEGSLSSEELVSAYLERINAVDSKLKAFLELNQEKILKQAKESD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R NG + +GIPIGIKD G T S IL+ F Y++TV KL + G V+ Sbjct: 61 DRRKNGKLLSEFDGIPIGIKDNICITGEVTSCSSKILENFVSPYDATVISKLKEKGFVLF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +LNMDEFAMGSS E S + +P+ S D+ PGGSSGGS+AAVAG + S+G+D Sbjct: 121 PRLNMDEFAMGSSTENSAFQTSKNPFDS----DRI-PGGSSGGSAAAVAGSMLPISLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPAS G G+KPTYGR SR G++++A SLDQ G + + + LL+ ++G D Sbjct: 176 TGGSIRQPASLCGIWGLKPTYGRVSRYGLVAYASSLDQIGPFSNDMDGISDLLEILSGID 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + + + + + +GI K ++ SP ++ + + + L+ GA++ Sbjct: 236 SKDQTTSKVNQFESKSVNEIDWKCKKIGIMKTEDFNF-SPDVNARYLEILKTLEGKGAEL 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQE 358 V + +YA+P YY+I+ AE SSNL+R+DG+RYGLR E L ++Y +RS GFG+E Sbjct: 295 VPLDFSLLKYAIPVYYLIATAECSSNLSRFDGIRYGLRKETSGKLDDLYSESRSAGFGKE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK RI++GT+ LSS YD++Y +A+K R LI++ + E F+ VDVIL PT+PT+AF +G+ Sbjct: 355 VKRRILLGTFSLSSGYYDAYYGKAQKARVLIRKQYAEFFKT-VDVILQPTSPTTAFKVGE 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + M D+ T +VN+AG+PAIS PA L + +P+G+QL F E L + Sbjct: 414 KTKDPIQMYQA--DILTTSVNLAGVPAISCPAGLDQNGLPIGVQLTTSHFDENKLLGFAK 471 Query: 479 IIEK 482 + K Sbjct: 472 SLSK 475 >gi|241172337|ref|XP_002410727.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Ixodes scapularis] gi|215494956|gb|EEC04597.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Ixodes scapularis] Length = 505 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 185/488 (37%), Positives = 275/488 (56%), Gaps = 7/488 (1%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E ++K S V++ + I+ I N +S +NA++ V+ + A A ES R +G Sbjct: 4 LTIKELVSHFKAKKCSPVDICATCIKEI-NDSSFLNAFVTVLPEAAEKQARESHARWKSG 62 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L+G+PI +KD F G+ T S +L F P Y +TV ++L GAV+LGK NMD Sbjct: 63 KPRGPLDGVPIAVKDNFCMTGVRTTCGSRMLANFYPPYTATVVERLQGEGAVVLGKTNMD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMD--STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF MGS S +GP +PW++ + D + GGSSGGS+ AVA ++G+DTGGS Sbjct: 123 EFGMGSGATDSAFGPTKNPWKNAGEAADDWYITGGSSGGSAVAVATGCSFGALGSDTGGS 182 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PAS G VG+KPTYG SR G+I S+D GI+ + V D+A+LL A A D D+ Sbjct: 183 TRNPASRCGVVGLKPTYGALSRHGLIPLTNSMDVPGILAKCVDDAAVLLSATACADPNDS 242 Query: 244 TCVNLP--VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 T V+ P V + A + S++G+ +G+PKEY + P + W+ L GA + Sbjct: 243 TSVSAPDSVRHLKLAGEPSLKGVKIGVPKEYHCPGMCPEVLDLWRDVADRLAALGAVVSS 302 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVK 360 +SLPH++Y+ Y +++ E +SN ARYDG+ YG R + +Y +R G + V+ Sbjct: 303 VSLPHSRYSTECYSVLNCCEVASNFARYDGLEYGHRASDDSSTDALYAASRHEGLNEVVR 362 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI+ G Y L Y+ ++ +A ++R LI DFT+ F GV+++LTP T T+A + Sbjct: 363 GRILAGNYFLLRANYEKYFTKALQVRRLISDDFTKVFASGVELLLTPVTLTAALRHSEWT 422 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 D T VNMAGLPA+SVP L + +PL LQL+G F E + + + + Sbjct: 423 LKDNRERASVEDFCTQPVNMAGLPAVSVPCRLSREGLPLSLQLVGPKFSEAAMLAAAKRL 482 Query: 481 EKEAGYFR 488 E E + R Sbjct: 483 ELELSFPR 490 >gi|169646823|ref|NP_001112370.1| glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Danio rerio] Length = 536 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 192/500 (38%), Positives = 284/500 (56%), Gaps = 29/500 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E LR +SA EL I I+ + +NAYI + + A AE +DKR+ G Sbjct: 17 LSIREVSQALRDGKVSATELCRKCINQIQRTR-YLNAYITIAEETAMEQAERADKRLRTG 75 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L+GIP +KD F T+ I T S++L G+ P + +TV QKL D GAV++GK N+D Sbjct: 76 KTLGPLDGIPFSVKDNFCTENIKTTCASNMLKGYVPPFSATVVQKLLDQGAVLVGKTNLD 135 Query: 126 EFAMGSSNETSYYGPVISPWR-------------SMDSTDKFTPGGSSGGSSAAVAGFLC 172 EFAMG+ + +GPV +PW D T G S + A+++ FL Sbjct: 136 EFAMGAGSTDGAFGPVRNPWSYAAPYREQSAEDPDSDWTITGGSSGGSAAAVASLSSFL- 194 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++G+DTGGS R P S G V +KP+YG SR G+I S+D GI+TR+V D+A +L Sbjct: 195 --ALGSDTGGSTRNPGSLCGVVALKPSYGLLSRHGLIPLVNSMDVPGIMTRSVHDAATVL 252 Query: 233 KAIAGYDECDATCVNLP--VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 + + G DE D+T V P P D ++ + VGIPKEY LS W + Sbjct: 253 RILQGRDERDSTTVQAPNTPPSLPEHFD--MRKICVGIPKEYHAPGLSEDTLAQWSRVAD 310 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYEN 349 ++AGA++ E+SLPHT Y++ Y+++ E +SN+AR+DG+ YG R + MY Sbjct: 311 IFENAGARVKEVSLPHTPYSIVCYHVLCCCEVASNMARFDGLEYGHRSAVDSSTDAMYAT 370 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GF V+ RI+ G Y L Y+ ++++A+++R LI DF + F G+DV+LTPTT Sbjct: 371 TRHEGFNNVVRRRILSGNYFLLKSNYERYFVKAQQMRRLIAEDFKKVFSSGIDVLLTPTT 430 Query: 410 PTSAFPLGK---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + A E+N + S DVFT VNMAGLPA++VP AL ++ +P+GLQLIGQ Sbjct: 431 LSDAARYADFITEDNRTRSA---QEDVFTQPVNMAGLPAVTVPTALSQRGLPIGLQLIGQ 487 Query: 467 PFREETLFSVGQIIEKEAGY 486 ++ L ++ +EK+ + Sbjct: 488 TLQDWKLLTIAHWMEKQLHF 507 >gi|152993378|ref|YP_001359099.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfurovum sp. NBC37-1] gi|151425239|dbj|BAF72742.1| glutamyl-tRNA amidotransferase subunit A [Sulfurovum sp. NBC37-1] Length = 447 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 188/417 (45%), Positives = 274/417 (65%), Gaps = 11/417 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EGIPI IKD K + S IL G+ YE+T + L G + G+ NMDEFAMGS Sbjct: 42 EGIPILIKDNIQVKDWPVTSGSKILQGYVAPYEATAIKNLKAKGMMPFGRANMDEFAMGS 101 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E S+YGP +P+ TD+ PGGSSGGS+AAVAG + A++G+DTGGSIRQPA++ Sbjct: 102 TTENSFYGPTKNPY----GTDR-VPGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPAAYC 156 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+ ++A SLDQ G IT+ V D+AIL AI G+DE D+T + + Sbjct: 157 GVVGMKPTYGRVSRFGLSAYASSLDQIGPITQNVEDAAILYDAIKGHDEKDSTSADFEIE 216 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 D L+ ++ +T+ + Y ++ I K + + ++ L+ AG IV + +T+Y + Sbjct: 217 DIANNLNPDVK-LTIAVIDSY-IEAADTDIQKAFNETVAKLEAAGHTIVHKEMSNTKYDI 274 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+++ AEA++NLARYDGVRYG R E K+ E++ NTRS GFG+EVK RIM+G +VLS Sbjct: 275 ATYYVLATAEAATNLARYDGVRYGRRAEAKNTEELFFNTRSEGFGEEVKRRIMLGNFVLS 334 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++Y++A+K+R LI+ +F + FE+ D+IL+P P+ A +G + + + Sbjct: 335 SGYYDAYYVKAQKVRHLIRDEFNKIFEEA-DLILSPVAPSVAPKIGSIHD---PLEMYKS 390 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 D++T+ VN+AGLP IS+P A ++ MP+GLQLI + F E+ LF+ +EK Y + Sbjct: 391 DMYTLGVNLAGLPGISLPVAKNDEGMPVGLQLIAKAFDEKILFNGAASMEKAVNYTK 447 >gi|332285649|ref|YP_004417560.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pusillimonas sp. T7-7] gi|330429602|gb|AEC20936.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pusillimonas sp. T7-7] Length = 510 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/491 (39%), Positives = 290/491 (59%), Gaps = 28/491 (5%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F +++ RD L+S+ ISA EL + A + + +NA++ + A A+E+D+++ Sbjct: 10 FEGIAQLRDALQSRKISARELA-ASALAAAEARADLNAFLHIDHDLTLAQADEADRQLAG 68 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G A L GIPI KD F T+G T A S +L + +++TV +L GAV LGKLN Sbjct: 69 GGQAPALAGIPIAHKDVFVTRGWRTTAASKMLAQYISPFDATVVSRLQQAGAVSLGKLNC 128 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGS NE S +GP +PW + G ++ ++ V G + GTDTGGS+ Sbjct: 129 DEFAMGSGNENSAFGPARNPWDLSAVPGGSSGGSAAAVAAGLVIG-----ATGTDTGGSV 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+ G GIKPTYG SR G++++ SLDQAG I R RD LL ++G+D DAT Sbjct: 184 RQPAALCGVSGIKPTYGTVSRFGMVAYGSSLDQAGPIARHARDLLELLDPMSGFDPRDAT 243 Query: 245 CVNL-----PVPDYERAL------------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 + P RA Q ++G+ +G+P E+ + L+P + + Sbjct: 244 SLEYCDGVQNQPGRIRAEFDAAAAQFDAAGSQPLKGLRIGVPSEFVDEALAPDVADAVRA 303 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEM 346 + + GA+ V+ISLP T ++P YY+I+PAEASSNL+RYDGVRYG R + KD+ +M Sbjct: 304 ALQTFESLGAERVDISLPRTALSIPTYYVIAPAEASSNLSRYDGVRYGHRAAQYKDLADM 363 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 +R+ GFG EV RIM+GTYVLS YD++YL+A+++R +I DF +AF DVI+ Sbjct: 364 TSRSRTEGFGDEVLRRIMVGTYVLSHGYYDAYYLQAQRVRRMIVDDFQQAFANQCDVIMG 423 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIG 465 P TP+ A +G +N D++T+++++AGLPA+SVP ++ +P+GLQ+IG Sbjct: 424 PVTPSVAKHIG--DNRDDPTADWLADIYTLSISLAGLPAMSVPCGFGTQRPLPIGLQIIG 481 Query: 466 QPFREETLFSV 476 F E L ++ Sbjct: 482 NYFTEGRLLAL 492 >gi|33591600|ref|NP_879244.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bordetella pertussis Tohama I] gi|39931426|sp|Q7VSN2|GATA_BORPE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33571243|emb|CAE44704.1| glutamyl-tRNA(GLN) amidotransferase subunit A [Bordetella pertussis Tohama I] gi|332381000|gb|AEE65847.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bordetella pertussis CS] Length = 512 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 215/491 (43%), Positives = 295/491 (60%), Gaps = 28/491 (5%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++ RD L + +SAVEL S + A + + S +NA++ + A A +D + Sbjct: 10 FGGIAALRDALARRQVSAVELAQSGLDAAQAA-SGLNAFLHIDPDLTLAQARAADAALAA 68 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIPI KD F T+G T A S +L G+ +++TV ++L + GAV LGKLN D Sbjct: 69 GTAGPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLAEAGAVSLGKLNCD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS NE S YGPV +PW + SSGGS+AAVA L AA+ GTDTGGS+R Sbjct: 129 EFAMGSGNENSAYGPVRNPWDTQAVPGG-----SSGGSAAAVAARLVAAATGTDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ G GIKPTYG SR GII+F SLDQAG + + RD LL + G+D DAT Sbjct: 184 QPAALCGVSGIKPTYGTVSRYGIIAFGSSLDQAGPLAPSSRDLLELLDVMTGFDPRDATS 243 Query: 246 V-----------------NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 + + Y+ A Q ++G+ +G+P+EY L+P + + Sbjct: 244 LQACDGQANESGRVRRGHDAAQAGYDAAGSQPLKGLRIGVPQEYFGAGLAPDVAAAVEAA 303 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMY 347 ++ + GA V +SLP T+ A+PAYY+I+PAEASSNLARYDGVRYG R + D+ EM Sbjct: 304 LAQFEQLGAVRVPVSLPRTELAIPAYYVIAPAEASSNLARYDGVRYGHRAAQYGDLNEMI 363 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 +R+ GFG EVK RI+IGTYVLS YD++YL+A+++R LI +DF AF DVI+ P Sbjct: 364 SRSRAEGFGDEVKRRILIGTYVLSHGYYDAYYLQAQRLRRLIAQDFQRAFAGQCDVIMGP 423 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC--EKKMPLGLQLIG 465 +PT A +G +N DV+T+ V++AGLPA+SVP + + P+GLQ+IG Sbjct: 424 VSPTVAKNIG--DNRDDPTADWLADVYTLGVSLAGLPAMSVPCGFGGQDGRRPVGLQIIG 481 Query: 466 QPFREETLFSV 476 F E L ++ Sbjct: 482 NYFDEGRLLAL 492 >gi|33603505|ref|NP_891065.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bordetella bronchiseptica RB50] gi|39931450|sp|Q7WEV1|GATA_BORBR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33577629|emb|CAE34894.1| glutamyl-tRNA(GLN) amidotransferase subunit A [Bordetella bronchiseptica RB50] Length = 512 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 217/491 (44%), Positives = 300/491 (61%), Gaps = 28/491 (5%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++ RD L + +SAVEL S + A + + S +NA++ + + A A +D + Sbjct: 10 FGGIAALRDALARRQVSAVELAQSGLDAAQAA-SGLNAFLHIDPELTLAQARAADAALAA 68 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIPI KD F T+G T A S +L G+ +++TV ++L + GAV LGKLN D Sbjct: 69 GTAGPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLAEAGAVSLGKLNCD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS NE S YGPV +PW + + PGGSSGGS+AAVA L AA+ GTDTGGS+R Sbjct: 129 EFAMGSGNENSAYGPVRNPWDT-----RAVPGGSSGGSAAAVAARLVAAATGTDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ G GIKPTYG SR G+I+F SLDQAG + + RD LL + G+D DAT Sbjct: 184 QPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMTGFDPRDATS 243 Query: 246 V-----------------NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 + + Y+ A Q ++G+ +G+P+EY L+P + + Sbjct: 244 LQACDGQANESGRVRRGHDAAQAGYDAAGSQPLKGLRIGVPQEYFGAGLAPDVAAAVEAA 303 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMY 347 ++ + GA V +SLP T+ A+PAYY+I+PAEASSNLARYDGVRYG R + D+ EM Sbjct: 304 LAQFEQLGAVRVPVSLPRTELAIPAYYVIAPAEASSNLARYDGVRYGHRAAQYGDLNEMI 363 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 +R+ GFG EVK RI+IGTYVLS YD++YL+A+++R LI +DF AF DVI+ P Sbjct: 364 SRSRAEGFGDEVKRRILIGTYVLSHGYYDAYYLQAQRLRRLIAQDFQRAFADQCDVIMGP 423 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC--EKKMPLGLQLIG 465 +PT A +G +N DV+T+ V++AGLPA+SVP + + P+GLQ+IG Sbjct: 424 VSPTVAKNIG--DNRDDPTADWLADVYTLGVSLAGLPAMSVPCGFGGQDGRRPVGLQIIG 481 Query: 466 QPFREETLFSV 476 F E L ++ Sbjct: 482 NYFDEGRLLAL 492 >gi|120403107|ref|YP_952936.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium vanbaalenii PYR-1] gi|166217689|sp|A1T6Y0|GATA_MYCVP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|119955925|gb|ABM12930.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium vanbaalenii PYR-1] Length = 498 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 206/483 (42%), Positives = 301/483 (62%), Gaps = 25/483 (5%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA------RDLE 72 +++SA E+ + + I ++++ +A++ V +A AAA DK I A L Sbjct: 19 REVSATEVTQACLDQIAATDAEYHAFLHVAGDQALAAAATVDKAIHEATAAGERLPSPLA 78 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD F T + T S IL+G+ Y++TVT KL G +LGK NMDEFAMGSS Sbjct: 79 GVPLALKDVFTTTDMPTTCGSKILEGWTSPYDATVTAKLRAAGIPILGKTNMDEFAMGSS 138 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S YGP +PW PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T Sbjct: 139 TENSAYGPTRNPWNV-----DCVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTA 193 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 TVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D D+T VN VPD Sbjct: 194 TVGVKPTYGTVSRYGLIACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVNAAVPD 253 Query: 253 YERALDQ----SIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 A ++G+ +G+ K+ R + P + ++ + L GA++ E+ PH Sbjct: 254 VVGAARAGARGDLKGVRIGVVKQLRSGEGYQPGVLASFTAAVEQLTALGAEVSEVDCPHF 313 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRI 363 ++L AYY+I P+E SSNLA++DG+RYGLRV G D E+ TR+ GFG EVK RI Sbjct: 314 DHSLAAYYLILPSEVSSNLAKFDGMRYGLRV-GDDGTTSAEEVMAMTRAAGFGAEVKRRI 372 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 MIGTY LS+ YD++Y +A+K+RTLI RD EA+ + VDV+++P TP++AF LG++ ++ Sbjct: 373 MIGTYALSAGYYDAYYNQAQKVRTLIARDLDEAY-RSVDVLVSPATPSTAFRLGEKVDDP 431 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M +++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E Sbjct: 432 LAM-YLF-DLCTLPLNLAGHCGMSVPSGLSADDNLPVGLQIMAPALADDRLYRVGAAYEA 489 Query: 483 EAG 485 G Sbjct: 490 ARG 492 >gi|289704847|ref|ZP_06501264.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Micrococcus luteus SK58] gi|289558343|gb|EFD51617.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Micrococcus luteus SK58] Length = 542 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 218/511 (42%), Positives = 310/511 (60%), Gaps = 30/511 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIE----------NSNSQMNAYIEVVAQKA 52 EL + + +RLR+ ++VELV +++ I + + + AY+ V +A Sbjct: 19 ELVRLTALQMAERLRAGTTTSVELVQAHLDRIAAHDGDVSADADGDRGVRAYLHVNTDEA 78 Query: 53 RAAAEESDK-RIINGDARD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 A A E D R G D L G+P+ +KD T+G T A S +L+G+ Y++TV Sbjct: 79 LAVAAEVDAIRAAGGPEADALHPLAGVPVAVKDNIVTRGQPTTAASRMLEGWLSPYDATV 138 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 +L + +LGK N+DEFAMG S E S +G +PW D+ PGGS GGS+AAV Sbjct: 139 VARLREARLPILGKTNLDEFAMGGSTEHSAFGITRNPWDG----DRV-PGGSGGGSAAAV 193 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A FL ++G+DTGGS+R+PA+FTGTVG+KPTYG SR G+I+ A SLDQ G RTV D Sbjct: 194 AAFLAPFALGSDTGGSVREPAAFTGTVGVKPTYGAVSRYGLIAMASSLDQIGPAARTVAD 253 Query: 228 SAILLKAIAGYDECDATCV-NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 +A L + IAG+D D+T + + P A + + G+ VG+ + D P I + Sbjct: 254 AAALQQVIAGHDPQDSTSLADAPADLTGAARGRDLAGLRVGVVTDLPADAFHPGIRAGFD 313 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDI 343 + ++ L++AGA+IVE+S P AL AYY+I P+EA+SNLAR+DGVRYG RV G I Sbjct: 314 EHVAALREAGAEIVEVSCPSFDAALGAYYLIMPSEATSNLARFDGVRYGHRVVPDGGGTI 373 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 ++ TR+ GFG EVK RI++GTY LS+ YD++Y A+K+RTL++ DF AFEQ VDV Sbjct: 374 EQVMGATRAAGFGAEVKRRIILGTYALSAGYYDAYYGSAQKVRTLVQEDFARAFEQ-VDV 432 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 ILTPT PT AF LG + ++ +M ND+ T+ N+AG+P +SVP + + +P GLQL Sbjct: 433 ILTPTAPTPAFELGAKTDDPMTM--YVNDLATIPANLAGIPGMSVPGGVVD-GLPYGLQL 489 Query: 464 IGQPFREET-LFSVGQIIEKEAGYFRPHKWW 493 + P RE+ L+ G +E+ G R W Sbjct: 490 MA-PAREDARLYEAGAALERLVGERRGGPVW 519 >gi|33598559|ref|NP_886202.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bordetella parapertussis 12822] gi|39931438|sp|Q7W3H7|GATA_BORPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|33574688|emb|CAE39341.1| glutamyl-tRNA(GLN) amidotransferase subunit A [Bordetella parapertussis] Length = 512 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 217/491 (44%), Positives = 298/491 (60%), Gaps = 28/491 (5%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++ RD L + +SAVEL S + A + + S +NA++ + A A +D + Sbjct: 10 FGGIAALRDALARRQVSAVELAQSGLDAAQAA-SGLNAFLHIDPDLTLAQARAADAALAA 68 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIPI KD F T+G T A S +L G+ +++TV ++L + GAV LGKLN D Sbjct: 69 GTAGPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLAEAGAVSLGKLNCD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS NE S YGPV +PW + + PGGSSGGS+AAVA L AA+ GTDTGGS+R Sbjct: 129 EFAMGSGNENSAYGPVRNPWDT-----RAVPGGSSGGSAAAVAARLVAAATGTDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ G GIKPTYG SR G+I+F SLDQAG + + RD LL + G+D DAT Sbjct: 184 QPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMTGFDPRDATS 243 Query: 246 V-----------------NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 + + Y+ A Q ++G+ +G+P+EY L+P + Sbjct: 244 LQACDGQANESGRVRRGHDAAQAGYDAAGSQPLKGLRIGVPQEYFGAGLAPDVAAAVDAA 303 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMY 347 ++ + GA V +SLP T+ A+PAYY+I+PAEASSNLARYDGVRYG R + D+ EM Sbjct: 304 LAQFEQLGAVRVPVSLPRTELAIPAYYVIAPAEASSNLARYDGVRYGHRAAQYGDLNEMI 363 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 +R+ GFG EVK RI+IGTYVLS YD++YL+A+++R LI +DF AF DVI+ P Sbjct: 364 SRSRAEGFGDEVKRRILIGTYVLSHGYYDAYYLQAQRLRRLIAQDFQRAFADQCDVIMGP 423 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC--EKKMPLGLQLIG 465 +PT A +G +N DV+T+ V++AGLPA+SVP + + P+GLQ+IG Sbjct: 424 VSPTVAKNIG--DNRDDPTADWLADVYTLGVSLAGLPAMSVPCGFGGQDGRRPVGLQIIG 481 Query: 466 QPFREETLFSV 476 F E L ++ Sbjct: 482 NYFDEGRLLAL 492 >gi|31794188|ref|NP_856681.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium bovis AF2122/97] gi|121638893|ref|YP_979117.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991385|ref|YP_002646074.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium bovis BCG str. Tokyo 172] gi|39931369|sp|Q7TXG2|GATA_MYCBO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217686|sp|A1KN06|GATA_MYCBP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|254790398|sp|C1AGC7|GATA_MYCBT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|31619783|emb|CAD96723.1| PROBABLE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE (SUBUNIT A) GATA (Glu-ADT SUBUNIT A) [Mycobacterium bovis AF2122/97] gi|121494541|emb|CAL73022.1| Probable glutamyl-tRNA(gln) amidotransferase (subunit A) gatA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774500|dbj|BAH27306.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium bovis BCG str. Tokyo 172] Length = 494 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 205/478 (42%), Positives = 308/478 (64%), Gaps = 19/478 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSTEITRACLDQIEATDETYHAFLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 488 >gi|215431965|ref|ZP_03429884.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis EAS054] gi|219559046|ref|ZP_03538122.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis T17] gi|260188037|ref|ZP_05765511.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis CPHL_A] gi|260202153|ref|ZP_05769644.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis T46] gi|260206340|ref|ZP_05773831.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis K85] gi|289444577|ref|ZP_06434321.1| glutamyl-tRNA(Gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T46] gi|289448685|ref|ZP_06438429.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis CPHL_A] gi|289571213|ref|ZP_06451440.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T17] gi|289575719|ref|ZP_06455946.1| glutamyl-tRNA(Gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis K85] gi|289755129|ref|ZP_06514507.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis EAS054] gi|289417496|gb|EFD14736.1| glutamyl-tRNA(Gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T46] gi|289421643|gb|EFD18844.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis CPHL_A] gi|289540150|gb|EFD44728.1| glutamyl-tRNA(Gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis K85] gi|289544967|gb|EFD48615.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T17] gi|289695716|gb|EFD63145.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis EAS054] Length = 494 Score = 329 bits (843), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 205/478 (42%), Positives = 308/478 (64%), Gaps = 19/478 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 488 >gi|148662862|ref|YP_001284385.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis H37Ra] gi|148824201|ref|YP_001288955.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis F11] gi|167967819|ref|ZP_02550096.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis H37Ra] gi|215404998|ref|ZP_03417179.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis 02_1987] gi|215412862|ref|ZP_03421572.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis 94_M4241A] gi|253797894|ref|YP_003030895.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis KZN 1435] gi|254365646|ref|ZP_04981691.1| glutamyl-tRNA(gln) amidotransferase (subunit A) gatA [Mycobacterium tuberculosis str. Haarlem] gi|254552091|ref|ZP_05142538.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289553199|ref|ZP_06442409.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis KZN 605] gi|289746817|ref|ZP_06506195.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis 02_1987] gi|294993898|ref|ZP_06799589.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis 210] gi|297635639|ref|ZP_06953419.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis KZN 4207] gi|297732637|ref|ZP_06961755.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis KZN R506] gi|298526482|ref|ZP_07013891.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis 94_M4241A] gi|306777307|ref|ZP_07415644.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu001] gi|306781218|ref|ZP_07419555.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu002] gi|306785857|ref|ZP_07424179.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu003] gi|306794708|ref|ZP_07433010.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu005] gi|306798951|ref|ZP_07437253.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu006] gi|306804796|ref|ZP_07441464.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu008] gi|306808990|ref|ZP_07445658.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu007] gi|306969088|ref|ZP_07481749.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu009] gi|306973424|ref|ZP_07486085.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu010] gi|307081133|ref|ZP_07490303.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu011] gi|313659969|ref|ZP_07816849.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis KZN V2475] gi|166217687|sp|A5U723|GATA_MYCTA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|134151159|gb|EBA43204.1| glutamyl-tRNA(gln) amidotransferase (subunit A) gatA [Mycobacterium tuberculosis str. Haarlem] gi|148507014|gb|ABQ74823.1| glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis H37Ra] gi|148722728|gb|ABR07353.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis F11] gi|253319397|gb|ACT24000.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis KZN 1435] gi|289437831|gb|EFD20324.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis KZN 605] gi|289687345|gb|EFD54833.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis 02_1987] gi|298496276|gb|EFI31570.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis 94_M4241A] gi|308214355|gb|EFO73754.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu001] gi|308325999|gb|EFP14850.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu002] gi|308329529|gb|EFP18380.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu003] gi|308337026|gb|EFP25877.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu005] gi|308340839|gb|EFP29690.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu006] gi|308344702|gb|EFP33553.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu007] gi|308348652|gb|EFP37503.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu008] gi|308353378|gb|EFP42229.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu009] gi|308357223|gb|EFP46074.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu010] gi|308361176|gb|EFP50027.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis SUMu011] gi|323718392|gb|EGB27566.1| glutamyl-tRNA(Gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis CDC1551A] gi|326904625|gb|EGE51558.1| glutamyl-tRNA(Gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis W-148] gi|328457671|gb|AEB03094.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis KZN 4207] Length = 494 Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 205/478 (42%), Positives = 308/478 (64%), Gaps = 19/478 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 488 >gi|311109323|ref|YP_003982176.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A [Achromobacter xylosoxidans A8] gi|310764012|gb|ADP19461.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Achromobacter xylosoxidans A8] Length = 511 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 212/476 (44%), Positives = 289/476 (60%), Gaps = 28/476 (5%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +SAVEL S + A E + S +N ++ + A+ A A +D + G A L GIPI KD Sbjct: 25 VSAVELAQSALAAAETA-SGLNCFLHIDAELTLAQARAADSALAAGSAGPLAGIPIAHKD 83 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 F T+G T A S +L+G+ +++TV ++L + GAV LGKLN DEFAMGS NE S YG Sbjct: 84 AFVTRGWRTTAGSKMLEGYVSPFDATVVERLGEAGAVSLGKLNCDEFAMGSGNENSAYGA 143 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 V +PW SSGGS+AAVA L AA+ GTDTGGS+RQPA+ G GIKPTY Sbjct: 144 VKNPWDHAAVPGG-----SSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTY 198 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV-------NLP---V 250 G SR G+++F SLDQAG + + RD LL I+G+D DAT + N P Sbjct: 199 GTVSRYGMVAFGSSLDQAGPLAESARDLLELLDVISGFDPRDATSLEKCDAATNEPGRVR 258 Query: 251 PDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 D+E A Q ++G+ +G+P EY L+P + + ++ + GA V +S Sbjct: 259 RDFEAAQGRFDAAGSQPLKGLRIGVPAEYFGAGLAPDVAAAVEAALAQFEALGAVRVPVS 318 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHR 362 LP T+ A+PAYY+I+PAEASSNLARYDGVRYG R + D+ EM +R+ GFG EVK R Sbjct: 319 LPRTELAIPAYYVIAPAEASSNLARYDGVRYGHRAAQYGDLNEMISRSRAEGFGDEVKRR 378 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+IGTYVLS YD++YL+A+++R LI +DF A+ DVI+ P TPT A +G +N Sbjct: 379 ILIGTYVLSHGYYDAYYLQAQRLRRLIAQDFQRAYADQCDVIMGPVTPTVAKNIG--DNR 436 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAAL--CEKKMPLGLQLIGQPFREETLFSV 476 DV+T+ V++AGLPA+S+P + P+GLQ+IG F E L ++ Sbjct: 437 DDPTADWLADVYTLGVSLAGLPAMSIPCGFGGAGNQRPVGLQIIGNYFDEGRLLAI 492 >gi|239917132|ref|YP_002956690.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Micrococcus luteus NCTC 2665] gi|281414402|ref|ZP_06246144.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Micrococcus luteus NCTC 2665] gi|239838339|gb|ACS30136.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Micrococcus luteus NCTC 2665] Length = 542 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 215/510 (42%), Positives = 306/510 (60%), Gaps = 28/510 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNA----------YIEVVAQKA 52 EL + + +RLR+ ++VELV +++ I + + A Y+ V +A Sbjct: 19 ELVRLTALQMAERLRAGTTTSVELVQAHLDRIAAHDGDVRADAAGDRGVRAYLHVNTDEA 78 Query: 53 RAAAEESDK-RIINGDARD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 A A E D R G D L G+P+ +KD T+G T A S +L+G+ Y++TV Sbjct: 79 LAVAAEVDAIRAAGGPEADALHPLAGVPVAVKDNIVTRGQPTTAASRMLEGWLSPYDATV 138 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 +L + +LGK N+DEFAMG S E S +G +PW D+ PGGS GGS+AAV Sbjct: 139 VARLREARLPILGKTNLDEFAMGGSTEHSAFGITRNPWDG----DRV-PGGSGGGSAAAV 193 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A FL ++G+DTGGS+R+PA+FTGTVG+KPTYG SR G+I+ A SLDQ G RTV D Sbjct: 194 AAFLAPFALGSDTGGSVREPAAFTGTVGVKPTYGAVSRYGLIAMASSLDQIGPAARTVAD 253 Query: 228 SAILLKAIAGYDECDATCV-NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 +A L + IAG+D D+T + + P A + + G+ VG+ + D P I + Sbjct: 254 AAALQQVIAGHDPQDSTSLADEPADLTAAARGRDLAGLRVGVVTDLPADAFHPGIRAGFD 313 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDI 343 + ++ L++AGA+IVE+S P AL AYY+I P+EASSNLAR+DGVRYG RV G I Sbjct: 314 EHVAALREAGAEIVEVSCPSFDAALGAYYLIMPSEASSNLARFDGVRYGHRVVPDGGGTI 373 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 ++ TR+ GFG EVK RI++GTY LS+ YD++Y A+K+RTL++ DF AFEQ VDV Sbjct: 374 EQVMGATRAAGFGAEVKRRIILGTYALSAGYYDAYYGSAQKVRTLVQEDFARAFEQ-VDV 432 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 ILTPT PT AF LG + ++ +M ND+ T+ N+AG+P +SVP + + +P GLQL Sbjct: 433 ILTPTAPTPAFELGAKTDDPMTM--YVNDLTTIPANLAGIPGMSVPGGVVD-GLPYGLQL 489 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 + ++ L+ G +E+ R W Sbjct: 490 MAPTRQDARLYEAGAALERLVAQRRGGPVW 519 >gi|15610148|ref|NP_217527.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis H37Rv] gi|6225415|sp|O53258|GATA_MYCTU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2791608|emb|CAA16096.1| PROBABLE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE (SUBUNIT A) GATA (Glu-ADT SUBUNIT A) [Mycobacterium tuberculosis H37Rv] Length = 494 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 204/478 (42%), Positives = 308/478 (64%), Gaps = 19/478 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF +G++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRMGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 488 >gi|152991024|ref|YP_001356746.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitratiruptor sp. SB155-2] gi|166217691|sp|A6Q4I0|GATA_NITSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|151422885|dbj|BAF70389.1| glutamyl-tRNA amidotransferase subunit A [Nitratiruptor sp. SB155-2] Length = 442 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 194/407 (47%), Positives = 262/407 (64%), Gaps = 22/407 (5%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD G S IL G+ Y++TV QKL NG G+ NMDEFAMGS Sbjct: 43 EGVPVAIKDNIQVDGWEVTCASKILKGYIAPYDATVIQKLRANGLAPFGRTNMDEFAMGS 102 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + ETS YG ++P + PGGSSGGS+AAVA + A++G+DTGGSIRQPA+F Sbjct: 103 TTETSCYGKTLNPKDT-----SRVPGGSSGGSAAAVAAGIAIAALGSDTGGSIRQPAAFC 157 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 G VG+KPTYGR SR G+ ++ SLDQ G +T+ V D+AIL IAG D D+T + Sbjct: 158 GVVGMKPTYGRVSRYGLAAYGSSLDQIGPMTQNVEDAAILYNIIAGSDAKDSTSARIECK 217 Query: 250 --VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VPD +R L +G+ Y D S I K + + I LK G +I+EISL Sbjct: 218 PVVPDPKRKL-------KIGVVPNYVKD-ASGAIQKAYDKAIEALKQEGHEIIEISLMDA 269 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +Y + +YYI + AEAS+NL+RYDGVRYG R E K++ EMY TRS GFG+EVK RI++GT Sbjct: 270 KYDIASYYITAMAEASTNLSRYDGVRYGYRAEAKNLKEMYLKTRSEGFGEEVKRRILLGT 329 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 +VLSS YD++Y++A+K R +IK ++ + FE+ VD+IL+P P AF G + + Sbjct: 330 FVLSSGYYDAYYIKAQKARHIIKDEYNKVFEK-VDLILSPVAPDVAFEFGAMKT---PLE 385 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 +DV+T+ VN+AGLPAIS+P E +P+GLQLIG+ F E+T+F Sbjct: 386 MYLSDVYTIGVNLAGLPAISLPVDEHE-GLPVGLQLIGKAFDEQTVF 431 >gi|163854730|ref|YP_001629028.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bordetella petrii DSM 12804] gi|229485754|sp|A9I0H5|GATA_BORPD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|163258458|emb|CAP40757.1| glutamyl-tRNA(GLN) amidotransferase subunit A [Bordetella petrii] Length = 512 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 214/501 (42%), Positives = 297/501 (59%), Gaps = 26/501 (5%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++E R L + +SA EL S + A + + +N ++ + A A+ +D + Sbjct: 10 FGGIAELRAALAGRQVSARELARSALDAAQAAGD-LNTFLHIDPDLTLAQADAADAALAA 68 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L G+PI KD F T+G T A S +L+G+ +++TV Q+L GAV LGKLN D Sbjct: 69 GTAGPLAGVPIAHKDAFVTRGWRTTAGSKMLEGYASPFDATVVQRLQAAGAVSLGKLNCD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGS+NE S YGPV +PW SSGGS+AAVA L AA+ GTDTGGS+R Sbjct: 129 EFAMGSANENSAYGPVRNPWDPNAVPGG-----SSGGSAAAVAARLVAAATGTDTGGSVR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-- 243 QPA+ G GIKPTYG SR GI++F SLDQAG + + RD LL ++G+D DA Sbjct: 184 QPAALCGVSGIKPTYGTVSRYGIVAFGSSLDQAGPLAPSSRDLLELLDPMSGFDPQDATS 243 Query: 244 --TCVNLP-VPDYERAL------------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 TC P P RA Q ++G+ +G+P+EY L+P + + Sbjct: 244 LETCDGAPNAPGRIRAAYDAAQAACDAAGSQPLKGLRIGVPQEYFGAGLAPDVAAAVEAA 303 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMY 347 ++ + GA+ V +SLP T+ A+PAYY+I+PAEASSNLARYDGVRYG R E D+ +M Sbjct: 304 LAQFEALGAQRVAVSLPRTELAIPAYYVIAPAEASSNLARYDGVRYGHRAAEYADLNQMI 363 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 +R+ GFG EVK RI+IGTYVLS YD++YL+A+++R LI +DF A+ DVI+ P Sbjct: 364 ARSRAEGFGDEVKRRILIGTYVLSHGYYDAYYLQAQRVRRLIAQDFQRAYAGQCDVIMGP 423 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 PT A +G +N DV+T+ V++AGLPA+S+PA P+GLQ+IG Sbjct: 424 VAPTVAKNIG--DNRDDPTADWLADVYTLGVSLAGLPAMSIPAGFGNGGRPVGLQIIGNY 481 Query: 468 FREETLFSVGQIIEKEAGYFR 488 F E L ++ ++ + R Sbjct: 482 FDEGRLLAIADRYQQVTDWHR 502 >gi|108798859|ref|YP_639056.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium sp. MCS] gi|119867974|ref|YP_937926.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium sp. KMS] gi|126434459|ref|YP_001070150.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium sp. JLS] gi|108769278|gb|ABG08000.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium sp. MCS] gi|119694063|gb|ABL91136.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium sp. KMS] gi|126234259|gb|ABN97659.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Mycobacterium sp. JLS] Length = 495 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 207/482 (42%), Positives = 302/482 (62%), Gaps = 20/482 (4%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLE 72 R+ +K+IS+ EL + + I ++ + +A++ V +A AAA D + G+ L Sbjct: 17 RIAAKEISSTELTQACLDQIAATDDRYHAFLHVAGNRALAAAARVDAAVAEGERLPSPLA 76 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD F T + T S IL+G+R Y++TVT +L G +LGK NMDEFAMGSS Sbjct: 77 GVPVALKDVFTTTDMPTTCGSKILEGWRSPYDATVTFRLRAAGLPILGKTNMDEFAMGSS 136 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S YGP +PW D+ PGGS GGS+AA+A F +IGTDTGGSIRQPA+ T Sbjct: 137 TENSAYGPTRNPW----DVDRV-PGGSGGGSAAALAAFQAPLAIGTDTGGSIRQPAALTA 191 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 TVG+KPTYG SR G+I+ A SLDQ G RTV D+A+L + IAG+D D+T V VPD Sbjct: 192 TVGVKPTYGTVSRYGLIACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVPAEVPD 251 Query: 253 YERA----LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 A + G+ VG+ K+ R + P + ++ + L GA +VE+ P+ Sbjct: 252 VVAAARAGASGDLNGVRVGVVKQLRGEGYQPGVLASFTAAVEQLTALGADVVEVDCPNFD 311 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIM 364 ++L AYY+I P+E SSNLAR+D +R+G+RV G D E+ TR+ GFG EVK RIM Sbjct: 312 HSLAAYYLILPSEVSSNLARFDAMRFGMRV-GDDGTHSAEEVMAMTRAAGFGPEVKRRIM 370 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IGTY LS+ YD++Y +A+K+RTLI D A+E+ VDV++TP TP++AF LG++ ++ Sbjct: 371 IGTYALSAGYYDAYYNQAQKVRTLIAGDLDAAYEK-VDVLVTPATPSTAFRLGEKVDDPL 429 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M +++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E Sbjct: 430 AM-YLF-DLCTLPLNLAGHCGMSVPSGLSPDDNLPVGLQIMAPALADDRLYRVGAAYEAA 487 Query: 484 AG 485 G Sbjct: 488 RG 489 >gi|229819879|ref|YP_002881405.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Beutenbergia cavernae DSM 12333] gi|229565792|gb|ACQ79643.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Beutenbergia cavernae DSM 12333] Length = 506 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 208/478 (43%), Positives = 290/478 (60%), Gaps = 23/478 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 L ++S+VE+ +++ I + ++A++ A AAA D GD L G+ Sbjct: 18 LEGGEVSSVEVTQAHLDRIGAVDDAVHAFLHTDGAPALAAAAAVDAARAAGDDLPALAGV 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T+G T A S IL + P Y++T+ +L G +LGK NMDEFAMGSS E Sbjct: 78 PIAVKDVVVTRGQPTTAGSRILADWVPPYDATLVTRLRAAGMPILGKTNMDEFAMGSSTE 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +GP +PW D+ PGGS GGS+AAVA + +IGTDTGGSIRQPA+ TGTV Sbjct: 138 HSAFGPTRNPW----DLDRI-PGGSGGGSAAAVAAYEAPLAIGTDTGGSIRQPAAVTGTV 192 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP----- 249 G+KPTYG SR G+I+ A SLDQAG TRTV D+A+L + I G+D D+T +LP Sbjct: 193 GVKPTYGSVSRYGLIALASSLDQAGPCTRTVLDAALLHEVIGGHDPADST--SLPGEATG 250 Query: 250 -VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 V + + G+ VG+ +E + + + + L+ GA++VE+S P Sbjct: 251 FVAAAHDGARRDLTGLRVGVVRELGGEGYQSEVRAAFDASVEALQRIGAEVVEVSCPSFD 310 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIM 364 AL AYY+I PAEASSNLA++DG+RYGLRVE D + TR GFG E K RI+ Sbjct: 311 AALAAYYLILPAEASSNLAKFDGMRYGLRVEPSDGPVTAERVMAATRGAGFGDEAKRRII 370 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y A+K+RTLI+RDF AF + VDV+++PT PT+AF LG++ ++ Sbjct: 371 LGTYALSAGYYDAYYGSAQKVRTLIQRDFAAAFAE-VDVLVSPTAPTTAFRLGEKLDD-- 427 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET-LFSVGQIIE 481 M NDV T+ N+AG+P IS+P +P G Q++ P RE+ L+ VG +E Sbjct: 428 PMAMYLNDVATIPANLAGIPGISIPNGTDAAGLPTGFQILA-PAREDARLYRVGAALE 484 >gi|320537000|ref|ZP_08036981.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Treponema phagedenis F0421] gi|320146150|gb|EFW37785.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Treponema phagedenis F0421] Length = 485 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 186/492 (37%), Positives = 289/492 (58%), Gaps = 20/492 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAE 57 + LNF SE + +L S+++S++E+V ++ +A E+ ++ +N +IE + A + Sbjct: 3 ICNLNF---SELKQKLDSRELSSLEIVQAFKKAYEDDAKNDLPLNGFIEFFSDAEEKAKK 59 Query: 58 ESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 ++R G A + L G+P +KD + KG CS IL G+ + +TV ++L GA Sbjct: 60 ADEERGSGGAADKPLLGLPFAVKDNISIKGEACTCCSKILQGYTAPFNATVIERLLAAGA 119 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 + +G+ NMDEFAMGSS E S YGP +P +T GGSSGGS+A VAG S+ Sbjct: 120 IPIGRTNMDEFAMGSSTEYSIYGPSRNPIDRSRTT-----GGSSGGSAAVVAGSQAPLSL 174 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+TGGS+R PAS+ G G+KPTYG SR G+++F SLDQ G+ ++ D A+ L + Sbjct: 175 GTETGGSVRLPASYCGLYGLKPTYGTLSRYGVVAFGSSLDQVGLFAKSADDIALALSVMV 234 Query: 237 GYDECDATCVNLP---VPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWL 292 G D D T ++ + + + ++ + V +PKE+ L+ + K WL Sbjct: 235 GKDARDETSADIDFAGLSSIQPFSKEELKNIKVALPKEFIHQKALAADVSKAMVDFFDWL 294 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTR 351 + +G + EI LP A+P YY+I+ +EA+SNL R+DG+RYGLR + GK E+Y TR Sbjct: 295 RMSGVQTQEIDLPVLDAAVPVYYVIAVSEAASNLMRFDGIRYGLREDPGKGYDELYIATR 354 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S GFG EVK RI+ G YVLS Y ++ +R I+R+ +E D I +PT PT Sbjct: 355 SDGFGPEVKRRIITGNYVLSHHFSGDCYEKSLHVRARIERETSETLRH-YDFICSPTAPT 413 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 AF LG++ N+ +M +D+FT VN+A +P++SVP+ + E +P+G+Q++G+ F E+ Sbjct: 414 PAFKLGEKINDPVTM--YLSDLFTTFVNLARVPSVSVPSGMTENGLPIGMQIVGKHFDEK 471 Query: 472 TLFSVGQIIEKE 483 + + + E E Sbjct: 472 NILRLAKTWEIE 483 >gi|326381525|ref|ZP_08203219.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gordonia neofelifaecis NRRL B-59395] gi|326199772|gb|EGD56952.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Gordonia neofelifaecis NRRL B-59395] Length = 495 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 212/494 (42%), Positives = 313/494 (63%), Gaps = 19/494 (3%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +++ ++ ++ ++ ++++S+VE+ +++ I + ++ A++ V + +A AAA+ +D Sbjct: 8 TDITGLSAADLAGKIAARELSSVEVTRAHLDRIAEIDGELGAFLHVGSDEALAAAQAADD 67 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I GDA L G+PI +KD F T T S IL+G+ Y++TVT KL G +LG Sbjct: 68 AIAAGDAPSALAGVPIALKDVFTTVDAPTTCGSKILEGWVSPYDATVTAKLRAAGIPILG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGSS E S Y +PW D+T PGGS GGS+AA+A + +IGTDT Sbjct: 128 KTNMDEFAMGSSTENSAYQVTRNPW---DTTR--IPGGSGGGSAAALASYQAPLAIGTDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS T TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D Sbjct: 183 GGSIRQPASVTATVGVKPTYGTVSRYGLVACASSLDQGGPCGRTVLDTALLHEVIAGHDP 242 Query: 241 CDATCVNLPVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T +++ +PD + G+ +G+ K+ + + + +++Q L D G Sbjct: 243 RDSTSIDVAIPDVVGAARAGAAGDLTGVRIGVVKQLQGEGYQAGVLESFQSACKQLTDLG 302 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRS 352 A IVE+ PH YAL AYY+I P+E SSNLAR+D +RYGLRV G D E+ TR Sbjct: 303 ATIVEVDCPHFSYALGAYYLILPSEVSSNLARFDAMRYGLRV-GDDGTHSADEVMALTRD 361 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RIMIGTY LSS YD+ Y +A+K+RTLI DF +A+ Q VDV+++PTTPT+ Sbjct: 362 AGFGPEVKRRIMIGTYALSSGYYDAFYGQAQKVRTLIAGDFAKAY-QDVDVLISPTTPTT 420 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREE 471 F LG++ ++ SM +++ D+ T+ VN+AG A+SVP+ L + +P+GLQ++ ++ Sbjct: 421 PFKLGEKVDDPLSM-YLF-DLCTLPVNLAGTAAMSVPSGLASDDGLPVGLQIMAPALADD 478 Query: 472 TLFSVGQIIEKEAG 485 L+ +G E G Sbjct: 479 RLYRIGAAYEAARG 492 >gi|307103500|gb|EFN51759.1| hypothetical protein CHLNCDRAFT_56360 [Chlorella variabilis] Length = 525 Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 204/518 (39%), Positives = 299/518 (57%), Gaps = 44/518 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++ +R ++ ++ +SA E+V +Y+ + Q+N++I V + A + A D ++ G+ Sbjct: 18 SLNAARLQIATRQMSATEVVRNYLSGLRRLEPQLNSFIAVDVEHALSQAAAIDNQLAKGE 77 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+ +GIKD T+G+ T A S L G+ P Y++T +L GAV++GK NMDE Sbjct: 78 EIGPLAGVVMGIKDNLCTQGLQTTAGSKELRGYVPPYDATAVARLRAAGAVVVGKTNMDE 137 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSS E S + P +PW TD+ PGGSSGGS+AAVA C A++G+DTGGSIRQ Sbjct: 138 FGMGSSCENSGFQPTFNPW----DTDR-VPGGSSGGSAAAVAANQCIAALGSDTGGSIRQ 192 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG+KPTYGR SR G++++A SLD G I +TV D+A +L IAG D DATC Sbjct: 193 PASFCGVVGVKPTYGRVSRNGLVAYASSLDCVGPIAQTVADAAAVLSVIAGPDSADATCS 252 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT----IDKTWQQGISWLKDAGAKIVEI 302 P D+ L ++ ++ RL + T + + I L++ GA E+ Sbjct: 253 QRPSEDFTEGL-VPLEQLSSKPLAGRRLAVIQETSGEGVAEALAAAIKHLQELGA---EV 308 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 SL LPAYY+I+ +EASSNL+RYDGVRYG R E ++ MY TR G G EV R Sbjct: 309 SLTCFGVGLPAYYVIALSEASSNLSRYDGVRYGQRAEADELRSMYGKTRHNGLGSEVARR 368 Query: 363 IMIGTYVLSSRCYDSHYLRARK--------------------IRTLIKRDFTEAFEQGVD 402 I++GTY LS+ YD++Y RA++ +RTL++R+ A +Q D Sbjct: 369 ILMGTYALSAGYYDAYYKRAQQASSQKGGALWYSCGEMPRPLVRTLVQREMGSALQQ-YD 427 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK----KMP 458 +L P PT+A+ +G E S + D+ TV +N+AGLPA+ +P E+ +P Sbjct: 428 ALLCPAAPTAAYRVG--EKTSDPLAMYKGDLMTVNLNLAGLPAVCLPCGFAEQPSGGTLP 485 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYF---RPHKWW 493 +G+Q+IG+ F E L + I E+ A RP ++ Sbjct: 486 VGMQMIGRAFGEGDLLQLAHIFEQTAAVMALRRPAVYF 523 >gi|320533079|ref|ZP_08033812.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinomyces sp. oral taxon 171 str. F0337] gi|320134694|gb|EFW26909.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinomyces sp. oral taxon 171 str. F0337] Length = 513 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 195/480 (40%), Positives = 296/480 (61%), Gaps = 34/480 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGI 78 ++S+ EL +++ I + + A++ V A++A + A+ +D G A +L G+P+ + Sbjct: 28 EVSSRELTQAHLDRIAAVDGAIGAFLNVDAERALSQADAADAARKEGQAASELTGVPVAV 87 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD T+G T A S +L+G+ P Y++T+ + L +LGK N+DEFAMG S E S + Sbjct: 88 KDLIVTRGQVTTAASRMLEGWVPPYDATLVRNLRAARTPILGKTNLDEFAMGGSTEHSAF 147 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW PGGSSGGS+AAV + ++GTDTGGSIRQPA+ TGTVG+KP Sbjct: 148 GRTANPWDL-----GRIPGGSSGGSAAAVGAYEAPVAVGTDTGGSIRQPAAVTGTVGVKP 202 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL- 257 TYG SR G+I+ A SLD G + RTV D+A+L IA +D D+T +PD R + Sbjct: 203 TYGTVSRFGVIAMASSLDTPGPMARTVLDTALLHDVIASHDPLDSTS----LPDAPRGMA 258 Query: 258 --------DQSIQGMTVGIPKEYRLD----YLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + G+ VG+ E LD Y + ++ + L+ AGA++ +SLP Sbjct: 259 AVVRAAQEGRDLSGLRVGVISE--LDGGEGYHDGVV-ASFHAALELLEAAGAQVETVSLP 315 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILE-MYENTRSIGFGQEVKH 361 H +YAL AYY+I PAEASSNLARYDG+RYGLRVE G E + TR GFG EVK Sbjct: 316 HLEYALDAYYLIMPAEASSNLARYDGMRYGLRVEPTSGPVTAETVMAATRGAGFGDEVKR 375 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GT+VLS+ YD++Y A+K+RTL++RDF A+++ D++++PT P +A+ G++++ Sbjct: 376 RIILGTHVLSAGYYDAYYGSAQKVRTLVQRDFAAAWDK-ADILVSPTAPVTAYRFGEKDD 434 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + DV T+ N+AG+P IS+P+ L + +P+G Q++ ++ L+ VG ++E Sbjct: 435 ---PLAMYKLDVTTIPANLAGVPGISLPSGLSDDGLPVGFQILAPQRADDRLYRVGAVLE 491 >gi|28278420|gb|AAH44563.1| Qrsl1 protein [Danio rerio] Length = 531 Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 191/500 (38%), Positives = 282/500 (56%), Gaps = 29/500 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E LR +SA EL I + + +NAYI + + A AE +DKR+ G Sbjct: 12 LSIREVSQALRDGKVSATELCRKCINQTQRTR-YLNAYITIAEETAMEQAERADKRLRTG 70 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A L+GIP +KD F T+ I T S++L G+ P + +TV QKL D GAV++GK N+D Sbjct: 71 KALGPLDGIPFSVKDNFCTENIKTTCASNMLKGYVPPFSATVVQKLLDQGAVLVGKTNLD 130 Query: 126 EFAMGSSNETSYYGPVISPWR-------------SMDSTDKFTPGGSSGGSSAAVAGFLC 172 EFAMG+ + +GPV +PW D T G S + A+++ FL Sbjct: 131 EFAMGAGSTDGAFGPVRNPWSYAAPYREQSAEDPDSDWTITGGSSGGSAAAVASLSSFL- 189 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++G+DTGGS R P S G V +KP+YG SR G+I S+D GI+TR+V D+A +L Sbjct: 190 --ALGSDTGGSTRNPGSLCGVVALKPSYGLLSRHGLIPLVNSMDVPGIMTRSVHDAATVL 247 Query: 233 KAIAGYDECDATCVNLP--VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 + + G DE D+T V P P D ++ + VGIPKEY LS W + Sbjct: 248 RILQGRDERDSTTVQAPNTPPSLPEHFD--MRKICVGIPKEYHAPGLSEDTLAQWSRVAD 305 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYEN 349 ++AGA++ E+SLPHT Y++ Y+++ E +SN+AR+DG+ YG R + MY Sbjct: 306 IFENAGARVKEVSLPHTPYSIVCYHVLCCCEVASNMARFDGLEYGHRSAVDSSTDAMYAT 365 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR GF V+ RI+ G Y L Y+ + ++A+++R LI DF + F G+DV+LTPTT Sbjct: 366 TRHEGFNNVVRRRILSGNYFLLKSNYERYSVKAQQMRRLIAEDFKKVFSSGIDVLLTPTT 425 Query: 410 PTSAFPLGK---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + A E+N + S DVFT VNMAGLPA++VP AL ++ +P+GLQ IGQ Sbjct: 426 LSDAARYADFITEDNRTRSA---QEDVFTQPVNMAGLPAVTVPTALSQRGLPIGLQPIGQ 482 Query: 467 PFREETLFSVGQIIEKEAGY 486 ++ L ++ +EK+ + Sbjct: 483 TLQDWKLLTIAHWMEKQLHF 502 >gi|157363707|ref|YP_001470474.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermotoga lettingae TMO] gi|189045266|sp|A8F5H6|GATA_THELT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157314311|gb|ABV33410.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotoga lettingae TMO] Length = 467 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 185/463 (39%), Positives = 295/463 (63%), Gaps = 25/463 (5%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 +L++ ++ I+ +S + ++I VV ++ EE + G + GIPI IKD T Sbjct: 16 DLINLSLERIKCIDSAVKSFITVVDKQ-----EE-----LEGPYK---GIPIAIKDNITT 62 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 K I T S +L+ + P Y++T ++L + G ++GK N+DEFAMGSS E S + +P Sbjct: 63 KNIRTTCGSKMLENYTPPYDATCVKRLKNYGFAIVGKTNLDEFAMGSSTERSAFFVTRNP 122 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 W +D + GGSSGGS+AAVA A++G+DTGGS+RQPA+F G VG KPTYG S Sbjct: 123 W-DLD----YVAGGSSGGSAAAVASGEVVAALGSDTGGSVRQPAAFCGIVGFKPTYGLVS 177 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 R G+++FA SLDQ G +T++VRD+A++++ IAG D D+T V+ + D+ ++ I GM Sbjct: 178 RYGLVAFASSLDQIGPMTKSVRDAALIMEVIAGKDPMDSTTVSKKL-DFLTHIEDGISGM 236 Query: 265 TVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 +P+E Y+ + L + +++ + + GAK+ + +P +YA+ YYII+PAEAS Sbjct: 237 KFAVPEEVYKYEQLDREVSDRFEEALKTAEKLGAKVSRVKIPTIKYAVATYYIIAPAEAS 296 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 SNLARYDGV+YGLR+E +++ Y TR++GFG+EV+ RI +GT+ LS+ Y++++ +A+ Sbjct: 297 SNLARYDGVKYGLRIEEPGLMDTYMKTRNVGFGEEVRRRIFLGTFTLSAAYYEAYFGKAQ 356 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 K+R L+ D D ILTPT+P+ AF +G + + + + D+FT+ N++GL Sbjct: 357 KVRKLLSDDLNRVLAD-FDAILTPTSPSPAFKIG---SVADPLTYYLMDIFTIPANLSGL 412 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 PAISVP K +P+GLQ++G+ F + + ++ + EK + Y Sbjct: 413 PAISVPFGFA-KNLPVGLQIMGRRFDDPKVLAIARAFEKYSPY 454 >gi|313681916|ref|YP_004059654.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Sulfuricurvum kujiense DSM 16994] gi|313154776|gb|ADR33454.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sulfuricurvum kujiense DSM 16994] Length = 446 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 191/404 (47%), Positives = 265/404 (65%), Gaps = 11/404 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EGIPI IKD G + S+IL G+ Y +TV +KL NG G+ NMDEFAMGS Sbjct: 43 EGIPIAIKDNIQVSGWSVTSGSNILKGYIAPYNATVIEKLLANGMSPFGRTNMDEFAMGS 102 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S YG ++P PGGSSGGS+AAVA L A++G+DTGGSIRQPA+F Sbjct: 103 TTESSCYGKTLNPLNH-----NCVPGGSSGGSAAAVAAGLAVAALGSDTGGSIRQPAAFC 157 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+ ++A SLDQ G +T+ V D+AIL I GYD D+T + Sbjct: 158 GIVGMKPTYGRVSRYGLGAYASSLDQIGPMTQNVEDAAILYDIIQGYDPKDSTSADRNDG 217 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 LD +++ + + I +Y D S + K + + I LK+AG IVE SL +Y + Sbjct: 218 TVSDKLDANVK-LKIAIVPDYVKD-ASEEVRKAYAKAIEALKNAGHTIVEKSLMDPKYDI 275 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYI + AEA++NLARYDG+RYG RVEG+++ + + TRS GFG EV+ RIM+G +VLS Sbjct: 276 SAYYITATAEATTNLARYDGIRYGNRVEGENLKDTFLQTRSNGFGPEVQRRIMLGNFVLS 335 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++Y++A+K+R LI+ ++ + FE+ VD+ILTP P +A+ G S + + Sbjct: 336 SGYYDAYYVKAQKVRRLIQEEYNKIFEE-VDLILTPVAPRTAYEFGAL---SDPLEMYLS 391 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 D++T++VN+AGLPAIS+P E MP+GLQLI P+ E+TLF+ Sbjct: 392 DIYTISVNLAGLPAISLPVDTAENGMPVGLQLIAAPYAEQTLFN 435 >gi|15827908|ref|NP_302171.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium leprae TN] gi|221230385|ref|YP_002503801.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium leprae Br4923] gi|6225414|sp|O33105|GATA_MYCLE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2414539|emb|CAB16428.1| probable amidase [Mycobacterium leprae] gi|13093461|emb|CAC30655.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Mycobacterium leprae] gi|219933492|emb|CAR71797.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Mycobacterium leprae Br4923] Length = 497 Score = 326 bits (835), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 206/481 (42%), Positives = 301/481 (62%), Gaps = 18/481 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLE 72 ++ +K++S+VE+ + + IE ++ A++ V A+KA +AA DK + G + L Sbjct: 19 KIVAKELSSVEITQACLDQIEATDDTYRAFLHVAAEKALSAAAAVDKAVAAGGQLSSTLA 78 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD F T + T S IL G+ Y++TVT +L G +LGK NMDEFAMGSS Sbjct: 79 GVPLALKDVFTTVDMPTTCGSKILQGWHSPYDATVTTRLRAAGIPILGKTNMDEFAMGSS 138 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T Sbjct: 139 TENSAYGPTRNPW----NVDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTA 193 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 TVG+KPTYG SR G+++ A SLDQ G RTV D+A+L IAG+D D+T V VPD Sbjct: 194 TVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHAVIAGHDARDSTSVEAAVPD 253 Query: 253 YERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 A + G+ VG+ ++ R + + ++Q + L GA + E+ PH Sbjct: 254 IVGAAKAGESGDLHGVRVGVVRQLRGEGYQSGVLASFQAAVEQLIALGATVSEVDCPHFD 313 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKHRIMI 365 YAL AYY+I P+E SSNLAR+D +RYGLRV + E+ TR+ GFG EVK RIMI Sbjct: 314 YALAAYYLILPSEVSSNLARFDAMRYGLRVGDDGSRSAEEVIALTRAAGFGPEVKRRIMI 373 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G Y LS+ YDS+Y +A+K+RTLI RD +A+ + VDV+++P TPT+AF LG++ ++ + Sbjct: 374 GAYALSAGYYDSYYSQAQKVRTLIARDLDKAY-RSVDVLVSPATPTTAFSLGEKADDPLA 432 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 M +++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E Sbjct: 433 M-YLF-DLCTLPLNLAGHCGMSVPSGLSSDDDLPVGLQIMAPALADDRLYRVGAAYEAAR 490 Query: 485 G 485 G Sbjct: 491 G 491 >gi|297626272|ref|YP_003688035.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922037|emb|CBL56599.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 510 Score = 326 bits (835), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 195/477 (40%), Positives = 302/477 (63%), Gaps = 14/477 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEG 73 R+ +++ S+ E+ +++ I+ ++A++ V A A E D +I G+ L G Sbjct: 16 RIAAREQSSTEVTGAFLDQIDAVEPAVHAFLAVDRDLALRRAGEVDAQIAAGERLSPLAG 75 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ +KD +G+ T A S IL+G+ Y++TV ++L G V+LGK N+DEFA GSS Sbjct: 76 VPVAVKDLLCYQGLPTTAASRILEGWMSPYDATVVRRLQAGGLVILGKTNLDEFASGSST 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E+S YGP +PW + PGGS GGS+AA+A +IGTDTGGSIRQPA+ TGT Sbjct: 136 ESSGYGPTHNPWDL-----ERIPGGSGGGSAAALAACEAPLAIGTDTGGSIRQPAAMTGT 190 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR GII+ A SLDQ G R D+A L + IAGYD D+T ++ PVP Sbjct: 191 VGVKPTYGGVSRFGIIAMASSLDQCGPCARNAADAAALHQVIAGYDPQDSTSLDRPVPPV 250 Query: 254 ERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 +A +++ + GM +G+ +E + +P ++ + + ++ L+ AGA+++E+S P + AL Sbjct: 251 RQAAERADVTGMRIGVVRELGGEGYAPGVEARFGEAVAQLEAAGAEVIEVSCPRFEQALA 310 Query: 313 AYYIISPAEASSNLARYDGVRYGLRV--EGKDILE-MYENTRSIGFGQEVKHRIMIGTYV 369 YY+I P+E SSNLARYD +RYGLRV +G+ +E + +R GFG EVK RI++GTY Sbjct: 311 TYYLIMPSELSSNLARYDAMRYGLRVGDDGQHSVEQVMRLSRGQGFGAEVKRRIILGTYA 370 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ YD++Y A+K+RTLI RDF AF++ VD +++P PT+AF LG++ ++ +M Sbjct: 371 LSAGYYDAYYGSAQKMRTLIARDFAAAFDR-VDALVSPVAPTTAFKLGEKVDDPLAM--Y 427 Query: 430 YNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 D+ T+ N+AG+ A S P + + +P+G Q++ ++ ++ VG +E+ G Sbjct: 428 MGDLCTIPSNLAGIAAGSFPCGVSPDDGLPVGFQVMAPALGDDQVYRVGAALERLVG 484 >gi|215428466|ref|ZP_03426385.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis T92] gi|289751691|ref|ZP_06511069.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T92] gi|289692278|gb|EFD59707.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T92] Length = 494 Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 204/478 (42%), Positives = 307/478 (64%), Gaps = 19/478 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YG +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGTTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 488 >gi|15842569|ref|NP_337606.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis CDC1551] gi|13882881|gb|AAK47420.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium tuberculosis CDC1551] Length = 494 Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 204/478 (42%), Positives = 306/478 (64%), Gaps = 19/478 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +I DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIXXDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ D+ T+ +N+AG +SVP+ L + +P+GLQ++ ++ L+ VG E G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARG 488 >gi|34558191|ref|NP_908006.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Wolinella succinogenes DSM 1740] gi|39931317|sp|Q7M842|GATA_WOLSU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|34483910|emb|CAE10906.1| GLU-TRNAGLN AMIDOTRANSFERASE SUBUNIT A [Wolinella succinogenes] Length = 449 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 189/436 (43%), Positives = 275/436 (63%), Gaps = 13/436 (2%) Query: 53 RAAAEESDKRIINGDARD-LEG-IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK 110 R ES G+ RD LEG IPI +KD KG S IL+G+ Y +TV +K Sbjct: 23 RKKVSESSLNAYVGEIRDSLEGGIPILVKDNINVKGSELTCGSKILEGYVAPYNATVIEK 82 Query: 111 LWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 L G G+ NMDEFAMGS+ E+S +G ++P S SSGGS++AVAG Sbjct: 83 LHAQGMSAFGRSNMDEFAMGSTTESSAHGKTLNPVDSSRVPGG-----SSGGSASAVAGG 137 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 L A++G+DTGGSIRQPA+F G VG+KPTYGR SR G++++A SLDQ G IT+ V D+AI Sbjct: 138 LAIAALGSDTGGSIRQPAAFCGCVGLKPTYGRVSRYGLVAYASSLDQIGPITQNVEDAAI 197 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 L AI+G+D D+T +L +ALD + + +P L S I + + + + Sbjct: 198 LFDAISGHDGRDSTSASLAPTQTHKALDANKKQTIAILPD--LLKEASKPIQEAYFETVK 255 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ G KIVE S+ +T Y + AYY++ AEASSNLAR+DGVRYG R E +++ E+Y + Sbjct: 256 ILESEGHKIVEKSMLNTAYHISAYYVLCTAEASSNLARFDGVRYGRRAEAQNLKELYIKS 315 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ GFG+EVK RI++G++VLSS YD++YL+A+K+R LIK + E F+ D++L+P P Sbjct: 316 RTEGFGEEVKRRILLGSFVLSSGYYDAYYLKAQKVRHLIKNQYDEIFKD-CDLVLSPVAP 374 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T A G + S + D++T+++N+AGLPA+S+P E+ +P+G+QLIG+ F E Sbjct: 375 TVAPKFG---STSTPLEMYLGDIYTISINLAGLPALSLPVGKSEEGLPVGMQLIGKAFGE 431 Query: 471 ETLFSVGQIIEKEAGY 486 +++ +E+ G+ Sbjct: 432 QSVLDGALSLERAIGF 447 >gi|257064864|ref|YP_003144536.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Slackia heliotrinireducens DSM 20476] gi|256792517|gb|ACV23187.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Slackia heliotrinireducens DSM 20476] Length = 495 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 205/483 (42%), Positives = 298/483 (61%), Gaps = 18/483 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M VS + L + + SA ++VD+ + I+ ++ Q++A++E+ ARAAA D I NG Sbjct: 7 MGVSRIHEGLAAGEFSACDVVDAALAHIKQADPQLHAFLELTEDAARAAAVRVDGAIANG 66 Query: 67 D---ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 L G+PI KD KG T SH+L+ + Y +T Q++ D G + LGKLN Sbjct: 67 TFGRLGPLAGVPIAFKDNMNLKGTRTTCASHMLETYVSPYTATCVQRMLDAGCLPLGKLN 126 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFA GS+ E S +GP +PW D+ PGGSSGGS+AAVA + A ++G+DTGGS Sbjct: 127 MDEFAFGSTTENSAFGPTRNPW----DPDR-VPGGSSGGSAAAVASGMTALALGSDTGGS 181 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA F G VG+KPTYG SR G+++F SLDQ G R+V+D+A L A+ G D D Sbjct: 182 IRQPAGFCGVVGVKPTYGMVSRYGVVAFGSSLDQVGPFARSVKDAAFALDALCGRDPMDC 241 Query: 244 TCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T ++ + D+ A ++ ++G VGI P + LS + + + L+ AGA +VE+ Sbjct: 242 TSQDVEI-DFVAATERPVEGARVGIVPSFMEAEGLSSEVKARVAEAAAKLEAAGATLVEV 300 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKH 361 LPH A+ AYY+++P EA SNLAR+D VRYG G D+ YE +R+ GFG E K Sbjct: 301 DLPHADAAISAYYVLAPCEAFSNLARFDSVRYGCCDAGHTDLGGQYEASRAKGFGAEAKR 360 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++G+Y+LSS YD +Y+RA+K+RTLI +DF A+ Q DVIL+P PT A G+ Sbjct: 361 RILLGSYLLSSGVYDEYYVRAQKVRTLITQDFRRAYRQ-CDVILSPVAPTVAPKFGELAE 419 Query: 422 NSGSMGHIY-NDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 + +Y +DVFT+A+N+AG ++VP L + MP+G+QL+ F++ +F+V Sbjct: 420 PA----QMYLSDVFTIALNIAGNGGMTVPCGLGRDSGMPVGVQLMAPQFQDGNMFAVASE 475 Query: 480 IEK 482 +E+ Sbjct: 476 LER 478 >gi|225446724|ref|XP_002278150.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302143486|emb|CBI22047.3| unnamed protein product [Vitis vinifera] Length = 546 Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 191/480 (39%), Positives = 290/480 (60%), Gaps = 18/480 (3%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 RD L ++ +AVEL + + + Q+N++I V R A E K N + L Sbjct: 57 RDNLINRRTTAVELAQLSLNRLRLTEPQINSFISVSETVLREAEEIDAKIARNEELGPLA 116 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+ +G+KD T + + S IL+ +RP +++T +++ D G +++GK N+DEF MGS+ Sbjct: 117 GVFVGVKDNICTADMPSTGGSRILENYRPPFDATAVKRVKDCGGIVVGKTNLDEFGMGST 176 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + +PW PGGSSGGS+AAV+ C S+G+DTGGS+RQPASF G Sbjct: 177 TEGSAFQVTANPWDV-----SRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCG 231 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G++++A SLD G +V D+ ILL AIAGYD D+T VP+ Sbjct: 232 VVGLKPTYGRVSRFGLMAYASSLDVIGCFGSSVADTGILLHAIAGYDGLDSTSSKHEVPN 291 Query: 253 YERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 Y + ++G+ VG+ +E D + + + S L++ G + E+SLP Sbjct: 292 YTSQFMSISSLESKPLKGLRVGLIRETLDDGVDKAVVSSIVGAASHLEELGCTVTEVSLP 351 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 LPAYYI++ +E+SSNL+RYDGVRYG +V + +Y ++R+ GFG EVK RI+ Sbjct: 352 SFSLGLPAYYILASSESSSNLSRYDGVRYGSQVGADRLNSLYGDSRAKGFGPEVKMRILT 411 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ YD++Y RA+++RTL+++ F A + D++++P P+ A+ +G+++N+ + Sbjct: 412 GTYALSAGYYDAYYKRAQQVRTLVQKSFKAALNEN-DILISPAAPSPAYSIGEKKNDPLA 470 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D+ TV VN+AGLPA+ +P E +P+GLQ+IG F EE L VG I E+ Sbjct: 471 M--YAGDIMTVNVNLAGLPALVLPCGFVEGGPAGLPVGLQMIGAAFDEEKLLKVGHIFEQ 528 >gi|326774210|ref|ZP_08233492.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces viscosus C505] gi|326636349|gb|EGE37253.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces viscosus C505] Length = 513 Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 195/480 (40%), Positives = 296/480 (61%), Gaps = 34/480 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGI 78 ++S+ EL +++ I + + A+++V A+ A + A+ +D G A +L G+P+ + Sbjct: 28 EVSSRELTQAHLDRIAAVDGAVGAFLDVDAECALSQADAADAARKEGQATSELTGVPVAV 87 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD T+G T A S IL+G+ P Y++T+ + L +LGK N+DEFAMG S E S + Sbjct: 88 KDLIVTRGQVTTAASRILEGWVPPYDATLVRNLRAACTPILGKTNLDEFAMGGSTEHSAF 147 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW PGGSSGGS+AAV + ++GTDTGGSIRQPA+ TGTVG+KP Sbjct: 148 GRTANPWDL-----GRIPGGSSGGSAAAVGAYEAPVAVGTDTGGSIRQPAAVTGTVGVKP 202 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL- 257 TYG SR G+I+ A SLD G + RTV D+A+L IA +D D+T +PD R + Sbjct: 203 TYGTVSRFGVIAMASSLDTPGPMARTVLDTALLHDVIASHDPLDSTS----LPDAPRDMA 258 Query: 258 --------DQSIQGMTVGIPKEYRLD----YLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + G+ VG+ E LD Y + ++ + L+ AGA++ +SLP Sbjct: 259 AVVRAAQEGRDLTGLRVGVISE--LDGGEGYHDGVV-ASFHAALELLEAAGAQVETVSLP 315 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILE-MYENTRSIGFGQEVKH 361 H +YAL AYY+I PAEASSNLARYDG+RYGLRVE G E + TR GFG EVK Sbjct: 316 HLEYALDAYYLIMPAEASSNLARYDGMRYGLRVEPTSGPVTAETVMAATRGAGFGDEVKR 375 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GT+VLS+ YD++Y A+K+RTL++RDF A+++ D++++PT P +A+ G++++ Sbjct: 376 RIILGTHVLSAGYYDAYYGSAQKVRTLVQRDFAAAWDK-ADILVSPTAPVTAYRFGEKDD 434 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + DV T+ N+AG+P +S+P+ L + +P+G Q++ ++ L+ VG ++E Sbjct: 435 ---PLAMYKLDVTTIPANLAGVPGMSLPSGLSDDGLPVGFQILAPQRADDRLYRVGAVLE 491 >gi|226941981|ref|YP_002797055.1| GatA [Laribacter hongkongensis HLHK9] gi|226716908|gb|ACO76046.1| GatA [Laribacter hongkongensis HLHK9] Length = 358 Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 178/355 (50%), Positives = 240/355 (67%), Gaps = 9/355 (2%) Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGSSNE S+YGPV +PW SSGGS+AAVA L A+ GTDTGGSIRQPA Sbjct: 1 MGSSNENSFYGPVKNPWDLAAVPGG-----SSGGSAAAVAARLVPAATGTDTGGSIRQPA 55 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G GIKPTYG SR G++++A SLDQ G + +T D A+LL +AG+DE D+T V Sbjct: 56 AFCGITGIKPTYGVVSRYGMVAYASSLDQGGPMAQTAEDCALLLNVMAGFDERDSTSVER 115 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY R L + I G+ VG+PKE+ + L I + + ++ LK GA IVE+SLP T+ Sbjct: 116 AAEDYTRDLARPIAGLKVGLPKEFFAEGLDADIARVVDETVAELKKLGADIVEVSLPKTR 175 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++PAYY+I+PAEASSNL+R+DGVRYG R + +D+ EMYE +R+ GFG+EVK RIM+GT Sbjct: 176 LSIPAYYVIAPAEASSNLSRFDGVRYGHRAADYRDLTEMYEKSRAEGFGEEVKRRIMVGT 235 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 YVLS YD++Y++A+KIR LI DF A + DVIL P PT A+ LG++ ++ +M Sbjct: 236 YVLSHGYYDAYYIQAQKIRRLIAEDFQRALTE-CDVILGPVAPTPAWNLGEKTSDPTAM- 293 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++T+AVN+AGLP +S+PA + P+GLQLIG F E L +V ++ Sbjct: 294 -YLADIYTLAVNLAGLPGMSLPAGVAANGRPVGLQLIGNYFAEARLLNVAHQFQQ 347 >gi|327403458|ref|YP_004344296.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Fluviicola taffensis DSM 16823] gi|327318966|gb|AEA43458.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Fluviicola taffensis DSM 16823] Length = 468 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 190/471 (40%), Positives = 275/471 (58%), Gaps = 34/471 (7%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 S +V SY++ IE + +NA++EV + A A D++I +G A L G+ IG+KD Sbjct: 17 SVESIVHSYLEQIEK-HKDLNAFLEVFTESALDQARLVDQKITSGKAGRLAGMVIGLKDN 75 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 KG A S IL GF Y +TV ++L AV++G+LN DEFAMGSSNE S YGPV Sbjct: 76 ICYKGHAVSASSKILGGFESLYSATVVERLLAEDAVIIGRLNCDEFAMGSSNENSAYGPV 135 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 + R PGGSSGGS+ +V+ +C ++G+DTGGSIRQPASFTGT+G KPTYG Sbjct: 136 KNNLRPTH-----VPGGSSGGSAVSVSAGMCTVALGSDTGGSIRQPASFTGTIGFKPTYG 190 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R SR G+I++A S DQ G + D+ ++L+ +AG D DAT + P+ Sbjct: 191 RVSRYGLIAYASSFDQIGPFANNLEDTVLVLEIMAGKDPHDATSSSKPL----------- 239 Query: 262 QGMTVGIPK--EYRLDYLS---------PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 G + IP + ++ YLS P + ++ I+ L+ G + +S P+ Y Sbjct: 240 -GFSTEIPAIGKKKIAYLSEALENENVDPEVRAMMEKTIADLRAQGHTVEGVSFPYLDYL 298 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P YY+++ AEASSNL+R+DGV YG + K + + Y +RS GFG EVK RIM GT+V Sbjct: 299 VPTYYVLTTAEASSNLSRFDGVHYGYQSPNAKGVEQTYTLSRSEGFGTEVKRRIMAGTFV 358 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS YD++Y + K+R ++K E F Q D+++ PTTP++AF G + + Sbjct: 359 LSHGFYDAYYTKGMKVRRVLKNKTNEIFTQ-YDLLILPTTPSTAFEFGSIND---PIQMY 414 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 D+FTV N+ G PAI++P + +PL LQ++ F EE +FS+ I Sbjct: 415 LQDIFTVHANLTGNPAIAIPHGMHSNGLPLSLQIMADDFNEEAIFSLANQI 465 >gi|144899096|emb|CAM75960.1| Amidase [Magnetospirillum gryphiswaldense MSR-1] Length = 270 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 156/266 (58%), Positives = 201/266 (75%), Gaps = 3/266 (1%) Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 + R VRD AI+L A+AG+D D+T +PVP++E AL I+G+ VGIPKEYR D LS Sbjct: 1 MARDVRDCAIMLGAMAGHDPKDSTSAPMPVPNFEAALTGDIRGLKVGIPKEYRPDGLSDE 60 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 I W+QGI WLK+AGA VEISLPHT+YALP YYI++PAEASSNLARYDG+R+GLRVEG Sbjct: 61 IQAVWEQGIQWLKEAGATPVEISLPHTKYALPTYYIVAPAEASSNLARYDGLRFGLRVEG 120 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 K + +MY+ TR+ GFG EV+ RIMIGTYVLS+ YD++Y +A+K+R LI DFT+AF+Q Sbjct: 121 KTLDDMYKKTRAAGFGAEVRRRIMIGTYVLSAGYYDAYYSKAQKVRRLIAEDFTKAFQQ- 179 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 VDVILTPT P++AF G +EN + NDVFT+ ++AGLP +S+PA L +PLG Sbjct: 180 VDVILTPTAPSAAF--GMDENTDDPVTMWLNDVFTIPTSLAGLPGLSLPAGLNASGLPLG 237 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 LQLIG+PF EET+F V ++E A + Sbjct: 238 LQLIGRPFDEETVFKVAGVMESAAQF 263 >gi|290999751|ref|XP_002682443.1| glutamyl-tRNA amidotransferase [Naegleria gruberi] gi|284096070|gb|EFC49699.1| glutamyl-tRNA amidotransferase [Naegleria gruberi] Length = 492 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 194/463 (41%), Positives = 283/463 (61%), Gaps = 30/463 (6%) Query: 37 SNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHIL 96 S ++ NAYI + A+ +ES ++ L+G+P +KD F T+GI T S+IL Sbjct: 39 SENKFNAYIRTCPEYAKKKLDESHEK----PEHPLKGVPFAVKDAFCTQGIQTTMASNIL 94 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 + P Y +TV ++L D GAVM+GK NMDEFAMGS +G +P +K Sbjct: 95 KDYIPPYTATVVKRLEDVGAVMIGKTNMDEFAMGSGTIFGAFGETRNPL-----DEKKIA 149 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 GGSSGGS+A VA C S+GTDTGGS+R PAS+ G VG KP+YG CSR G+IS+ SLD Sbjct: 150 GGSSGGSAACVAEESCFFSLGTDTGGSVRLPASYCGVVGFKPSYGSCSRYGMISYGSSLD 209 Query: 217 QAGIITRTVRDSAILLKAIAGYDECDATC-VNLPVPDYER--ALDQS-----IQGMTVGI 268 GI ++TVR+SAI+ ++G D+ D T +N+ D + ++D ++ + +GI Sbjct: 210 TCGIFSKTVRESAIVFNTLSGNDQNDPTTKLNVSPVDLSKLDSIDNEYNKGILKNVKIGI 269 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 P EY +D L+ I K W++ I W++D GA++ +SLPH++ AL YY+I+ AEASSNL+ Sbjct: 270 PVEYFVDELNDNIVKVWEETIKWIQDQTGAQVEYVSLPHSKEALSTYYVIATAEASSNLS 329 Query: 328 RYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 RYDG+RYG +V + +D+L Y RS GFG EV RI+ G + LS YD+ + +A++ R Sbjct: 330 RYDGLRYGNKVSKNQDLLAYYLQNRSEGFGNEVLRRIVSGNFALSVDKYDTFFKKAQQTR 389 Query: 387 TLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLP 444 LI DF + + QG+D +LTP TPT A + ++ S ++ ND+FTV ++AG+P Sbjct: 390 RLIANDFYQVLQDQGIDYLLTPCTPTPA--IDRDLFTKMSPVEMFVNDIFTVPSSLAGVP 447 Query: 445 AISVPAALCE-----KKMPLGLQLIGQPFREETLFSVGQIIEK 482 AISVP + + K +GLQLI E++ ++EK Sbjct: 448 AISVPIEINDPNKEGSKSKIGLQLIA--LSEQSCLEGATVLEK 488 >gi|268324176|emb|CBH37764.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [uncultured archaeon] Length = 478 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 199/473 (42%), Positives = 291/473 (61%), Gaps = 29/473 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEG 73 +++ +S +L+ + IE+S ++N YI + A A E DKR + + L G Sbjct: 15 IKNGSLSCEDLLLKIYERIESS--KLNCYITLNKDAALEKAIEVDKRRNEEEYGRKKLLG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD TKGI T S+IL G+ P Y++ V + L GA+++GK NMDEF MG+S Sbjct: 73 VPIAIKDSITTKGIQTTCASYILTGYVPPYDAMVIEALKQEGAIIIGKTNMDEFCMGTST 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSYYGP +P+ SSGGS+AAVA ++G+DTGGSIR PASF G Sbjct: 133 ETSYYGPTRNPYDPGRVPGG-----SSGGSAAAVAAGEAVIALGSDTGGSIRCPASFCGI 187 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+I++A SL+Q G + TV D+A+LL+ I+ DE D+T V L D Sbjct: 188 VGLKPTYGFVSRYGLIAYANSLEQIGPMASTVTDTALLLEVISAKDERDSTQVKL---DN 244 Query: 254 ERALD-----------QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +++ +I+GM +G+PKE+ ++ +SP + K + ++ GA EI Sbjct: 245 NASMNYRCSWLNGERSDTIKGMKIGVPKEF-IEGVSPEVGKAVWDSVHKFEELGATYEEI 303 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKH 361 S+ + +YAL +YYI++ +EASSNLAR+DG+RYGLR + +D + R GFG+EVK Sbjct: 304 SMRNLKYALASYYILAMSEASSNLARFDGLRYGLRSGKDEDWHSTFSRIRGEGFGEEVKR 363 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTY LS+ Y +YL+A K+RTLIK +F +A + D++ PT P AF LG+ Sbjct: 364 RIILGTYALSAGYYGKYYLKALKVRTLIKNEFADALKTR-DILAMPTMPFVAFELGERIK 422 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + S+ DV TV+VN+AG+P+ISVP +P+GLQL+G+ F E+ + Sbjct: 423 DPLSL--YLADVNTVSVNLAGVPSISVPCG-SSDGLPIGLQLVGKYFDEDVIL 472 >gi|126642813|ref|YP_001085797.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter baumannii ATCC 17978] Length = 398 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 188/385 (48%), Positives = 262/385 (68%), Gaps = 12/385 (3%) Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 +LD F Y++TV +K G V LGK+NMDEFAMGS++E+SY G +PW ++D Sbjct: 1 MLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPW-ALDHV--- 56 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 PGGSSGGS+AAVA L + GTDTGGSIRQPASF G G+KPTYGR SR GII++A S Sbjct: 57 -PGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASS 115 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD-QSIQGMTVGIPKEY- 272 LDQAG + R+ D A L+ IAG+D D+T V V DY L+ S++G+ +GIPK+Y Sbjct: 116 LDQAGPMARSAEDCAYLMNVIAGHDAKDSTSVKKEVDDYVANLNGTSVKGLRIGIPKQYF 175 Query: 273 RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 + L + ++ + L++ GA +VEI L T+ +P YY+I+PAEASSNL+RYDGV Sbjct: 176 NVAGLDADVKARVEESLKKLEEMGATLVEIDLNMTEAYVPTYYLIAPAEASSNLSRYDGV 235 Query: 333 RYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RYG R E D++++Y+ +RS GFG E++ RI+IGTY LS+ YD++Y++A+K+R LI++ Sbjct: 236 RYGYRCENPADLMDLYKRSRSEGFGPEIQRRILIGTYALSAGYYDAYYVKAQKVRRLIQQ 295 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 DF +AFE VDVI P PT+A+ +G + + D++T+AVN+AGLPAI+ P Sbjct: 296 DFLKAFEN-VDVIAAPAAPTTAYKIGASLD---PVEMYLGDIYTIAVNLAGLPAINAPVG 351 Query: 452 LCEKKMPLGLQLIGQPFREETLFSV 476 + +P+GLQLIG + E L S+ Sbjct: 352 FDKDNLPVGLQLIGNYWSESQLLSI 376 >gi|293602409|ref|ZP_06684855.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter piechaudii ATCC 43553] gi|292819171|gb|EFF78206.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter piechaudii ATCC 43553] Length = 508 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 201/456 (44%), Positives = 277/456 (60%), Gaps = 27/456 (5%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +N ++ + A+ A A +D + G A L G+PI KD F T+G T A S +L+G+ Sbjct: 44 LNCFLHIDAELTLAQARAADNALAAGTAGPLAGVPIAHKDAFVTRGWRTTAGSKMLEGYV 103 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +++TV ++L GAV +GKLN DEFAMGS NE S YG V +PW SS Sbjct: 104 SPFDATVVERLGTAGAVSIGKLNCDEFAMGSGNENSAYGVVKNPWDHAAVPGG-----SS 158 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GGS+AAVA L AAS GTDTGGS+RQPA+ G GIKPTYG SR G+++F SLDQAG Sbjct: 159 GGSAAAVAARLVAASTGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMVAFGSSLDQAGP 218 Query: 221 ITRTVRDSAILLKAIAGYDECDAT-------CVNLP----------VPDYERALDQSIQG 263 + ++ RD LL I+G+D DAT VN P ++ A Q ++G Sbjct: 219 LAQSSRDLLELLDVISGFDPRDATSLEKCDGAVNEPGRVRRDFDAAQAAFDAAGSQPLKG 278 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 + +G+P+EY L+ + + + ++ + GA V +SLP T+ A+PAYY+I+PAEAS Sbjct: 279 LRIGVPEEYFGAGLAADVAASVEGALAQFEALGAVRVPVSLPRTELAIPAYYVIAPAEAS 338 Query: 324 SNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 SNLARYDGVRYG R E D+ EM +R+ GFG EVK RI+IGTYVLS YD++YL+A Sbjct: 339 SNLARYDGVRYGHRAEQYGDLNEMISRSRAEGFGDEVKRRILIGTYVLSHGYYDAYYLQA 398 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 +++R LI +DF A+ DVI+ P TP+ A +G +N DV+T+ V++AG Sbjct: 399 QRLRRLIAQDFQRAYAGQCDVIMGPVTPSVAKNIG--DNRDDPTADWLADVYTLGVSLAG 456 Query: 443 LPAISVPAALC--EKKMPLGLQLIGQPFREETLFSV 476 LPA+S+P K P+GLQ+IG F E L ++ Sbjct: 457 LPAMSIPCGFGGDNGKRPVGLQIIGNYFDEGKLLAI 492 >gi|227498231|ref|ZP_03928400.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinomyces urogenitalis DSM 15434] gi|226832364|gb|EEH64747.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Actinomyces urogenitalis DSM 15434] Length = 511 Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 200/484 (41%), Positives = 296/484 (61%), Gaps = 38/484 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-----DLEGI 74 D+SA EL +++ IE + + A+++V A KA + A+ +D ++ +L G+ Sbjct: 21 DLSARELTQAHLDRIEAVDGAVGAFLDVDAVKALSDADAADAARAEARSQGREVPELTGV 80 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F T+G T A S IL G+ P Y++T L +LGK N+DEFAMG S E Sbjct: 81 PVAVKDLFVTRGQATTAASKILQGWIPPYDATAVANLRATRMPILGKTNLDEFAMGGSTE 140 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + +PW PGGSSGGS+AAV F ++GTDTGGSIRQPA+ TGTV Sbjct: 141 HSAFHRTANPWDL-----GRIPGGSSGGSAAAVGAFEAPLALGTDTGGSIRQPAAVTGTV 195 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G+I+ A SLD G + RTV D+A+L +A YD D+T ++ D Sbjct: 196 GVKPTYGTVSRYGVIAMASSLDTPGPMARTVLDTALLHDVMASYDPLDSTSLS----DAP 251 Query: 255 RALDQSIQ---------GMTVGIPKEYRLD----YLSPTIDKTWQQGISWLKDAGAKIVE 301 R + + ++ G+ VG+ E LD Y S +D ++ ++ L++AGA I Sbjct: 252 RGMAEVVRAAQAGRDLTGLRVGVIAE--LDGGEGYHSGVLD-SFHAALTLLEEAGAVIET 308 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILE-MYENTRSIGFGQ 357 +SLPH +YAL AYY+I PAE SSNLARYDG+RYGLRVE G E + TR GFG Sbjct: 309 VSLPHLEYALDAYYLIMPAEVSSNLARYDGMRYGLRVEPTSGPVTAETVMAATRGAGFGD 368 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E K RI++GT+VLS+ YD++Y A+K+RTL++RDF A+E+ DV+++PT P +A+ G Sbjct: 369 EAKRRIILGTHVLSAGYYDAYYGSAQKVRTLVQRDFDAAWER-FDVLVSPTAPVTAYRFG 427 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++++ + DV T+ N+AG+P +S+P+ L + +P+G Q++ ++ L+ VG Sbjct: 428 EKDD---PLAMYKLDVTTIPANLAGIPGMSLPSGLSDDGLPVGFQVLAPQRADDRLYRVG 484 Query: 478 QIIE 481 ++E Sbjct: 485 AVLE 488 >gi|328701989|ref|XP_001952547.2| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog [Acyrthosiphon pisum] Length = 569 Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 174/480 (36%), Positives = 268/480 (55%), Gaps = 5/480 (1%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +S + RLR + +SAV+L + IEN S +NA++ V + A ES KR+ +G Sbjct: 88 ISVLKKRLRDRTLSAVDLYAKTLSDIEN-KSDLNAFVHV-TRDGDQRAVESHKRLQDGTQ 145 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 R LEGIPI +KD F TKG+ T S +L F P Y++TV ++L GA+++GK N+DEFA Sbjct: 146 RPLEGIPIAVKDNFCTKGVPTTCASKMLQNFVPVYDATVVERLKAAGAIIIGKTNLDEFA 205 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS S +GP + WRS GGSSGGS AVA +C A++G+DTGGSIR PA Sbjct: 206 MGSGTVDSIFGPTKNVWRS-KPNQWHIAGGSSGGSCVAVASGMCVAALGSDTGGSIRNPA 264 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S+ G VG KP+YG SR G+I S+D GI +TV D +L + G D D+TCV+ Sbjct: 265 SYCGVVGYKPSYGLLSRHGLIPLVNSMDVPGIAAKTVEDVVTVLSVLIGPDANDSTCVDT 324 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + I +GIP+EY + LS + +TW + + D+ + ++S+PHT Sbjct: 325 NLDTNSFQTNFLIDKCRIGIPEEYNCEGLSNEVKETWDYIANLINDSKGAVQKVSMPHTS 384 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILEMYENTRSIGFGQEVKHRIMIG 366 ++ Y +++ E +SN++RY G+ YG R + K + +R G+ V+ RI+ G Sbjct: 385 VSIATYSVLNACEVASNMSRYTGLFYGYRSTDDHKSFESLISTSRMEALGEVVRSRILSG 444 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + L Y+ +++++ K+R LI DF ++ D ++TPTT ++A L + ++ Sbjct: 445 NFFLLRSNYEKYFMQSLKVRRLISDDFKNLWKSNYDFLVTPTTLSTAPLLSEFKSLDNRT 504 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D T NM G PAI++P L KMP+ +Q++ F + L +EK+ + Sbjct: 505 QCATQDYCTQPANMTGCPAITIPVKLSSNKMPISIQIMASNFDDIRLLQFANWLEKKLQF 564 >gi|11499910|ref|NP_071154.1| Glu-tRNA amidotransferase, subunit A (gatA-2) [Archaeoglobus fulgidus DSM 4304] gi|6225409|sp|O27955|GATA_ARCFU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2648182|gb|AAB88921.1| Glu-tRNA amidotransferase, subunit A (gatA-2) [Archaeoglobus fulgidus DSM 4304] Length = 457 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 199/480 (41%), Positives = 292/480 (60%), Gaps = 27/480 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E ++++ S+ + V ++ IE S ++NAYI V +A AE+ D+ + G Sbjct: 1 MRIAEWKEKVESQ--GCYDAVSEMLERIEKS--RLNAYITVCKDEALKMAEKYDRGELKG 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ +KD +TKGI T S +L +RP +++ V +KL GA+++GK NMDE Sbjct: 57 R---LAGIPVAVKDNISTKGILTTCASKMLSNYRPVFDAHVVEKLKQEGAIIIGKANMDE 113 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG++ ETSY+G V +P + GGSSGGS A +A S+G+DTGGSIR Sbjct: 114 FAMGTTTETSYFGVVRNP-----HDEARVAGGSSGGSGAVIAADEAVLSLGSDTGGSIRC 168 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G G+KPTYG SR G+I +A SL+Q G + ++ D A+LL+ IAG D D+T Sbjct: 169 PASFCGVYGLKPTYGLVSRYGLIPYANSLEQIGPMADSIEDLALLLEVIAGKDTRDSTNA 228 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 E + + + VGI E + + K + + + +++ ++ E+S+P Sbjct: 229 G-----REFRFEPEDRKLRVGIIAEMGGN---DDVMKRFNEAVEVIREK-HEVGEVSMPS 279 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMI 365 +YAL AYYII+ +EASSNLARYDGVRYG +E D Y R+ GFG EVK RIM+ Sbjct: 280 FKYALAAYYIIAMSEASSNLARYDGVRYGFALEKLDSWRRYFSKVRAEGFGDEVKRRIML 339 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+Y LS+ Y +YL+A+K+RTL+ RDF +AFE+ DV+++PT P F +G+ + Sbjct: 340 GSYALSAGYYGKYYLKAQKVRTLVIRDFKKAFEE-YDVLISPTMPALPFKIGELAD---P 395 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + DV TV VN+AGLPA+SVP + K +P+GLQ+IG F E TL + G+ + + G Sbjct: 396 LTMYKADVNTVPVNLAGLPALSVPVGMV-KGLPVGLQVIGNYFSENTLLNFGKWVGERFG 454 >gi|229815879|ref|ZP_04446203.1| hypothetical protein COLINT_02935 [Collinsella intestinalis DSM 13280] gi|229808574|gb|EEP44352.1| hypothetical protein COLINT_02935 [Collinsella intestinalis DSM 13280] Length = 504 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 195/476 (40%), Positives = 279/476 (58%), Gaps = 18/476 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +R+ + SAVE+ + + AI+ S + A+++V + A AA D G+ L G+ Sbjct: 17 VRAGEFSAVEVARAALSAIDARESDVQAFLQVTPEVALGAAARVDALRAAGEPLPPLAGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD G T S +L+ + Y +T Q++ D G V LGK NMDEFA GSS E Sbjct: 77 PLAIKDNMNMLGTRTTCASRMLENYESPYTATCVQRMLDAGCVPLGKANMDEFAFGSSTE 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S + +PW + PGGSSGGS+AAVA + S+G+DTGGSIRQPA+ G V Sbjct: 137 SSAFHRTNNPWDL-----ERVPGGSSGGSAAAVAAGMATLSLGSDTGGSIRQPAALCGVV 191 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI--AGYDECDATCVNLPVPD 252 G+KPTYG SR G+++F SLDQ G RT D A+ L A+ G D D T ++ Sbjct: 192 GVKPTYGTVSRYGVVAFGSSLDQVGPFGRTTADVALSLDALVSGGRDAYDGTSRDVEA-S 250 Query: 253 YERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + L+ + G VGI P L+P + + ++ L D GA++VE+ LPH A+ Sbjct: 251 FTEHLEDGVAGRRVGIVPAFMEAAGLAPEVKRAVERAARSLADQGAELVEVDLPHLDAAI 310 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYY+I PAEA SNLAR+DGVRYG + G ++ E +R+ GFG E K R ++G Y+L Sbjct: 311 AAYYVIGPAEAFSNLARFDGVRYGYQEPGCANLAEQSAKSRARGFGAEAKRRQLLGAYLL 370 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD +Y A+K RTLI D+ AFEQ VD IL P +PT+AF G+ + + +Y Sbjct: 371 SSGVYDKYYFAAQKARTLITDDYARAFEQ-VDAILMPASPTAAFKFGELSDPT----QMY 425 Query: 431 -NDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEA 484 +D+FT+++N+AG ++VP L E MP+ QL+G+PF + L S + +E+ A Sbjct: 426 LSDLFTISINIAGNGGVTVPMGLGEDSGMPVAAQLVGKPFDDVRLLSFARAVERAA 481 >gi|312375578|gb|EFR22924.1| hypothetical protein AND_13993 [Anopheles darlingi] Length = 400 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 176/397 (44%), Positives = 246/397 (61%), Gaps = 8/397 (2%) Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 +L+ F P Y +TV +L GA++LGK N+D+F MGS S +GP + W + D+F Sbjct: 1 MLENFVPTYSATVVDRLEQRGAIVLGKTNLDQFGMGSGCVDSIFGPTRNSWSENLADDQF 60 Query: 155 -TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSSGGS+ AVA LC A++G+DTGGS R PAS+ G VG+KPTYG SR G+I Sbjct: 61 RIAGGSSGGSAVAVAAGLCYAALGSDTGGSTRNPASYCGIVGLKPTYGLLSRHGLIPLVN 120 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS-IQGMTVGIPKEY 272 S+D GI+TRT+ D AI+L AIAG D+ D+T V P + LD S ++G+ VGIP+EY Sbjct: 121 SMDVPGIMTRTIEDCAIVLNAIAGPDDRDSTTVKRPFLPIK--LDSSFVKGLRVGIPREY 178 Query: 273 RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 + L + + W + L+ AGA + +S+P+T ++ Y I++ E SSN+ARYDG+ Sbjct: 179 HCEGLDKEVLECWTRVADLLERAGATVTSVSMPYTASSIFVYSILNQCEVSSNMARYDGI 238 Query: 333 RYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 YG R E ++Y TR+ GF VK+RI+ G Y L R YD ++ +A K+R LI Sbjct: 239 EYGHRSKEDASTEQLYAKTRAEGFNSVVKNRILSGNYFLLRRNYDKYFEKALKVRRLIAE 298 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAISVPA 450 DF AF+ VD++LTPTT + A PL K+ S + D T + NMAG+PA+S+P Sbjct: 299 DFVRAFKD-VDILLTPTTLSDA-PLYKDFIRSNNRDQCAVQDFCTQSANMAGIPALSLPI 356 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 +L +++PL LQL+G F EE L VG IEKE + Sbjct: 357 SLSSRRLPLSLQLMGDHFSEELLLRVGAWIEKEVDFL 393 >gi|32266200|ref|NP_860232.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter hepaticus ATCC 51449] gi|39931415|sp|Q7VIA7|GATA_HELHP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|32262250|gb|AAP77298.1| Glu-tRNAGln amidotransferase [Helicobacter hepaticus ATCC 51449] Length = 447 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 187/411 (45%), Positives = 267/411 (64%), Gaps = 11/411 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD KG S IL G+ Y ++V KL +N G+ NMDEFAMGS+ Sbjct: 45 GVPILIKDNINVKGWEITCASKILKGYVSPYNASVITKLHENKMCAFGRANMDEFAMGST 104 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+S YG V +P +D++ PGGSSGGS+AAVA L AS+G+DTGGSIRQPA F G Sbjct: 105 TESSCYGRVKNP---LDTSR--VPGGSSGGSAAAVAAGLAIASLGSDTGGSIRQPAGFCG 159 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KP+YGR SR G+I+++ SLDQ G IT+ V D+A+LL AI+GYD+ D+T NLP + Sbjct: 160 CVGLKPSYGRVSRYGLIAYSSSLDQIGPITQNVEDAALLLDAISGYDKQDSTSANLPSLN 219 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + LD + + V I K++ D +P I + + I L+ G IVE S+ T+Y + Sbjct: 220 TFKDLDPNAR-YKVAILKDFLKD-ATPQIQEAYNHTIKILESMGHTIVEKSMLDTRYHIS 277 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 AYYII AEASSNLAR+DG+RYG R E K++ ++Y NTRS FG+EVK RI++G++VLSS Sbjct: 278 AYYIICTAEASSNLARFDGIRYGTRSESKNLKDVYLNTRSAYFGEEVKRRILLGSFVLSS 337 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++YL+A+++R I D+ F + D IL P P+ A G + S+ +D Sbjct: 338 GYYDAYYLKAQQVRKKICADYESIFNE-CDSILLPIAPSVAPKFGSTHS---SLEMYLSD 393 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++T+ VN+AGLPA+ +P + + + +G+Q IG F+E+ + ++ +EKE Sbjct: 394 IYTIGVNLAGLPALCMPVSKDKNGLSIGMQFIGAKFKEQNILNIAYGLEKE 444 >gi|78776972|ref|YP_393287.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfurimonas denitrificans DSM 1251] gi|109892000|sp|Q30SH9|GATA_SULDN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|78497512|gb|ABB44052.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sulfurimonas denitrificans DSM 1251] Length = 447 Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 189/417 (45%), Positives = 266/417 (63%), Gaps = 16/417 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +G+PI IKD K + S+IL G+ Y +TV +K+ G G+ NMDEFAMGS Sbjct: 43 DGVPIAIKDNIQVKDWSVTSGSNILQGYIAPYNATVIEKMLSAGLSPFGRTNMDEFAMGS 102 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S+YG ++P PGGSSGGS+AAV L A++G+DTGGSIRQPASF Sbjct: 103 TTESSFYGKTLNPHNK-----DCVPGGSSGGSAAAVGAGLAIAALGSDTGGSIRQPASFC 157 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV--NLP 249 G VG+KPTYGR SR G+ ++A SLDQ G +T+ V D+AIL I+G+DE D+T N Sbjct: 158 GIVGMKPTYGRVSRYGLGAYASSLDQIGPMTQNVEDAAILYDIISGHDEKDSTSAHKNDK 217 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 V D L+ + + +PK + S + K ++ I+ LK G +IVE L ++ Sbjct: 218 VSD---KLNPNRKIRIAVLPK--HIQNASEDVKKAYELAINALKKVGHEIVEAELMDAKF 272 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + AYYI + AEA++NLARYDG+RYG RV GKD+ + + TRS GFG EVK RI++G +V Sbjct: 273 DISAYYITATAEATTNLARYDGIRYGNRVVGKDLNDTFVQTRSQGFGDEVKRRILLGNFV 332 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS Y+++Y++A+K R LIK +++ FE VD+IL+P PT+A G+ S M Sbjct: 333 LSSGYYEAYYVKAQKTRHLIKDQYSKIFEN-VDLILSPVAPTTANKFGEL---STPMEMY 388 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T++VN+AGLPAISVP + + MP+GLQLI + E+TLF +E+E Y Sbjct: 389 LSDLYTISVNLAGLPAISVPISKSSEGMPIGLQLIANAYDEQTLFDGALSLEREINY 445 >gi|38344880|emb|CAD41903.2| OSJNBa0033G05.4 [Oryza sativa Japonica Group] gi|38347327|emb|CAE05977.2| OSJNBa0063C18.18 [Oryza sativa Japonica Group] Length = 497 Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 183/451 (40%), Positives = 281/451 (62%), Gaps = 20/451 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-- 70 R+ L S + +A E+ Y+ + + + ++I V A AEE D+RI + D Sbjct: 54 RESLLSGERTAAEITAEYLSRLRRTEPSVRSFIHVADAAAEREAEELDRRIAT-EGLDAV 112 Query: 71 --LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+ +G+KD T + + S ILDG++P Y++T ++L + GA+++GK N+DEF Sbjct: 113 GPLAGVLVGVKDNLCTANMPSTGGSRILDGYQPAYDATAVRRLREAGAIVVGKTNLDEFG 172 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ E S + +PW D PGGSSGGS++AV+ C S+G+DTGGS+RQPA Sbjct: 173 MGSTTEGSGFQVTTNPW-----DDSRVPGGSSGGSASAVSARQCVVSLGSDTGGSVRQPA 227 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SF G VG+KPTYGR SR G++++A SLD G +V D+A +L IAG+D+ D+T + Sbjct: 228 SFCGVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVVDTATILSVIAGHDKMDSTSSSH 287 Query: 249 PVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V DY+ L + + GM +GI +E + + + + + S L+ G+ + E Sbjct: 288 DVSDYKSELVPLDLLESKPLNGMRIGIIQETLGEGVETGVISSIKDAASHLEQLGSVVEE 347 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP LPAYYI++ +EASSNL+RYDG+RYG +V G D+ E+Y +R+ G G EVK Sbjct: 348 VSLPSFSLGLPAYYILASSEASSNLSRYDGIRYGRQVSGDDLNELYGGSRANGLGHEVKM 407 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GTY LS+ YD++Y RA+++RTL+K+ F EA E+ D++++P P++A+ +G++ N Sbjct: 408 RILMGTYALSAGYYDAYYKRAQQVRTLVKKSFKEALER-YDILVSPAAPSAAYKIGEKIN 466 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 + +M D TV VN+AGLPA+ VP Sbjct: 467 DPLAM--YAGDTMTVNVNLAGLPALVVPCGF 495 >gi|254459328|ref|ZP_05072749.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacterales bacterium GD 1] gi|207083941|gb|EDZ61232.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacterales bacterium GD 1] Length = 447 Score = 319 bits (817), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 193/457 (42%), Positives = 285/457 (62%), Gaps = 19/457 (4%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 +A++ + ++N + E + K A E + +N EG+PI IKD G + Sbjct: 6 EALKLNKDELNKFKEELKAKIEARPELNAYIDVNNIG---EGVPIAIKDNIQVNGWSVTS 62 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S+IL G+ Y +TV +K+ D G G+ NMDEFAMGS+ E+S+YG +P S Sbjct: 63 GSNILQGYIAPYNATVIEKMVDAGLSPFGRTNMDEFAMGSTTESSFYGKTQNPHNS---- 118 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 ++ PGGSSGGS+AAV L A++G+DTGGSIRQPA+F G VG+KPTYGR SR G+ ++ Sbjct: 119 -EYVPGGSSGGSAAAVGAGLAIAALGSDTGGSIRQPAAFCGIVGMKPTYGRVSRYGLGAY 177 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATC--VNLPVPDYERALDQSIQGMTVGIP 269 A SLDQ G +T+ V D+AIL I+G+D D+T +N V D LD + + +P Sbjct: 178 ASSLDQIGPMTQNVEDAAILYDIISGHDAKDSTSADMNDKVSD---KLDANRKMTIAVLP 234 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 K ++ S + K +Q I LK AG IVE L ++ + AYYI + AEA++NLARY Sbjct: 235 K--HIENASEDVKKAYQVAIDVLKAAGHTIVERELMDAKFDISAYYITATAEAATNLARY 292 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 DG+RYG RV G ++ + + TRS GFG EVK RI++G +VLSS Y+++Y++A+K R +I Sbjct: 293 DGIRYGNRVTGTNLEDTFIKTRSNGFGDEVKRRILLGNFVLSSGYYEAYYVKAQKTRHMI 352 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 K + + FE VD+IL+P P A G+ +N M +D+++++VN+AGLPA+++P Sbjct: 353 KDQYNKIFED-VDLILSPIAPGIAPKFGELKN---PMDMYLSDLYSISVNLAGLPALALP 408 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + + MP+GLQLI +P+ E+TLF +EK+ Y Sbjct: 409 ISKSDAGMPVGLQLIAKPYDEQTLFDGSLSLEKQINY 445 >gi|195450833|ref|XP_002072653.1| GK13718 [Drosophila willistoni] gi|194168738|gb|EDW83639.1| GK13718 [Drosophila willistoni] Length = 506 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 189/466 (40%), Positives = 282/466 (60%), Gaps = 12/466 (2%) Query: 32 QAIENSNS--QMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIH 88 QA++++ S +NA+I + + A A+ES++R + +L+GIPI +KD F T + Sbjct: 29 QAVKDALSLRTLNAFIRLTPELALLQAKESEERFQEKQPKSELDGIPIAVKDNFCTANVP 88 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 T S +L F P Y +TV +L G V+LGK N+D+FAMG+ S YGP + W Sbjct: 89 TTCASRMLQDFVPPYNATVVSRLRQAGTVLLGKTNLDQFAMGAGTVDSIYGPTKNIWSED 148 Query: 149 DSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 S DK+ GGSSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G Sbjct: 149 LSKDKWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHG 208 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER-ALDQ-SIQGMT 265 +I S+D GI R+V D +L IAG D D+T + P + +DQ +++ ++ Sbjct: 209 LIPLVNSMDVPGIFARSVNDCVKVLNVIAGPDSKDSTTIRQPFRKLQLPEVDQINLRSIS 268 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSN 325 +GIPKEY LSP + TW + L+ AGAK+ ++SLPHT ++ Y I++ E +SN Sbjct: 269 IGIPKEYHCLGLSPEVLATWTKIADILECAGAKVEQVSLPHTAASIFVYSILNQCEVASN 328 Query: 326 LARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 +ARYDG+ YG R ++ + ++Y TR+ GF Q VK RI+ G ++L + Y ++ +A + Sbjct: 329 MARYDGIEYGHRALDERSTEQLYATTRAEGFNQVVKTRILTGNFLLLRKNYQKYFEKALR 388 Query: 385 IRTLIKRDFTEAFE---QGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNM 440 +R LI DF++ FE Q VD++LTPTT T A PL ++ + + D T NM Sbjct: 389 VRRLIAEDFSKVFETNNQAVDILLTPTTLTEA-PLFRDFSALSNRDQCAVQDFCTQPANM 447 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 AG+PA+S+P L + +PL LQL+ + E+ L +V + IE + + Sbjct: 448 AGIPAVSIPVRLSQNGLPLSLQLMSKSLNEQLLLTVARWIEAQVSF 493 >gi|52548912|gb|AAU82761.1| glutamyl-tRNA amidotransferase subunit A [uncultured archaeon GZfos19C8] Length = 478 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 199/470 (42%), Positives = 290/470 (61%), Gaps = 23/470 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEG 73 +++ +S L+ + IE S ++N YI + A A E DKR + + L G Sbjct: 15 IKNGSLSCEGLLSKIYERIERS--KLNCYITLNKDAALEKAIEVDKRRNEEEYGQKKLLG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD TKGI T S+IL G+ P Y++ V + L GA+++GK NMDEF MG+S Sbjct: 73 VPIAIKDSITTKGIQTTCASNILTGYVPPYDAMVIEALKQEGAIIIGKTNMDEFCMGTST 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ETSYYGP +P PGGSSGGS+AAVA ++G+DTGGSIR PASF G Sbjct: 133 ETSYYGPTRNP-----HDPSRVPGGSSGGSAAAVAAGEAVIALGSDTGGSIRCPASFCGI 187 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL---PV 250 VG+KPTYG SR G+I++A SL+Q G + TV D+A+LL+ I+ DE D+T + L Sbjct: 188 VGLKPTYGFVSRYGLIAYANSLEQIGPMASTVTDTALLLEVISAKDERDSTQIKLDNNAS 247 Query: 251 PDY-----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +Y +I+GM +G+PK++ ++ +SP + K + ++ GA EIS+ Sbjct: 248 TNYRCSWLNDGRSDTIKGMKIGVPKDF-IEGVSPEVGKAVWDSVHKFEELGATYEEISMR 306 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 + +YAL +YYI++ +EASSNLAR+DG+RYGLR + +D + R GFG+EVK RI+ Sbjct: 307 NLKYALASYYILAMSEASSNLARFDGLRYGLRSGKDEDWHSTFSRIRGEGFGEEVKRRII 366 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ Y +YL+A K+RTLIK +F +A + D++ PT P AF LG+ + Sbjct: 367 LGTYALSAGYYGKYYLKALKVRTLIKNEFEDALKTH-DILAMPTMPFVAFELGERIKDPL 425 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 S+ DV TV+VN+AG+P++S+P E +P+GLQL+G+ F E+ + Sbjct: 426 SL--YLADVNTVSVNLAGVPSVSIPCGSSE-GLPIGLQLVGKYFDEDVIL 472 >gi|302335480|ref|YP_003800687.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Olsenella uli DSM 7084] gi|301319320|gb|ADK67807.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Olsenella uli DSM 7084] Length = 504 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 195/470 (41%), Positives = 285/470 (60%), Gaps = 18/470 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 D SA E+ + + A++ ++ A++E+ A A AAA E+D R G+ L G+P+ Sbjct: 20 DFSAAEVAQASLSAVDAREPEVQAFLEISADLALAAARETDGRRARGEGLGPLAGVPVAF 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G HT S +L+G+ + +T Q+L D GA +GK NMDEFA GSS E+S + Sbjct: 80 KDNMHLVGTHTTCASRMLEGYGSTFTATCVQRLLDAGATPVGKANMDEFAFGSSTESSAF 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 +PW + + PGGSSGGS+AAVA S+G+DTGGSIRQPAS G VG+KP Sbjct: 140 HRTNNPWDT-----ERVPGGSSGGSAAAVAAGEVTLSLGSDTGGSIRQPASLCGVVGMKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVPDYERA 256 TYG SR G+++F SLDQ G R V D A+ + A+ G D D+T + PV ER Sbjct: 195 TYGAVSRYGVVAFGSSLDQVGPFGRRVEDVALAMNALVSPGRDPLDSTSQDCPVDFLER- 253 Query: 257 LDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L++ I+G TVG +P + L+ + + + + L+D GA+IVE+ LP+ A+ AYY Sbjct: 254 LEEPIEGRTVGVVPALLEAEGLADEVRRGIEVARAALEDQGARIVEVELPNIASAIAAYY 313 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+P EA SNLAR+DGVRYG + +G L E +R+ GFG+E K R M+G Y+LSS Sbjct: 314 VIAPCEAFSNLARFDGVRYGYQEQGCATLAEQTSLSRAHGFGEEAKRRQMLGAYLLSSGT 373 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDV 433 YD +Y A+++RTLI +D+ A+++ DVIL P +P +AF G+ + + +Y +D+ Sbjct: 374 YDRYYYPAQQVRTLITQDYVAAYQR-CDVILMPASPRTAFKFGEISDPT----QMYASDM 428 Query: 434 FTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 FT++ N+AG +SVP L E +P+ QL G FR+ L S + +E+ Sbjct: 429 FTISSNIAGNGGVSVPLGLGEDSGLPISAQLQGPAFRDRQLLSFARALER 478 >gi|55980542|ref|YP_143839.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermus thermophilus HB8] gi|62298011|sp|Q9LCX3|GATA_THET8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|304445800|pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome gi|304445803|pdb|3KFU|H Chain H, Crystal Structure Of The Transamidosome gi|55771955|dbj|BAD70396.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus thermophilus HB8] Length = 471 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 191/476 (40%), Positives = 291/476 (61%), Gaps = 20/476 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E R R+ ++S +E+ +Y++ ++ + + A++ + ++ AE D + Sbjct: 1 MLAHEIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLSL-NERLLEEAEAVDPGL--- 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+ + +KD AT+G+ T A S +L+ F P YE+T +L GA++LGK N+DE Sbjct: 57 ---PLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDE 113 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSS E S + P +P+ D+ PGGSSGGS+AA+A L ++G+DTGGS+RQ Sbjct: 114 FGMGSSTEHSAFFPTKNPF----DPDR-VPGGSSGGSAAALAADLAPLALGSDTGGSVRQ 168 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G G+KPTYGR SR G+I++A SLDQ G + R+VRD A+L+ A AG D DAT + Sbjct: 169 PAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAAAGPDPLDATSL 228 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +LP P ++ AL+ + + +G+ +E L SP +++ ++ + ++ G + E+S P Sbjct: 229 DLP-PRFQEALEGPLPPLRLGVVREA-LAGNSPGVERALEEALKVFRELGLSVREVSWPS 286 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 AL AYYI++PAEASSNLARYDG YG R G+++ M E TR++ FG EVK R+++G Sbjct: 287 LPQALAAYYILAPAEASSNLARYDGTLYGRRAAGEEVEGMMEATRAL-FGLEVKRRVLVG 345 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+VLSS Y+++Y RA+ R +K + F + VD++L PTTP AFP G + + Sbjct: 346 TFVLSSGYYEAYYGRAQAFRRRLKAEAQALFRE-VDLLLLPTTPHPAFPFGARRD---PL 401 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++TV N+ GLPA+S PA E +P+GLQL+ +E L E+ Sbjct: 402 AMYREDLYTVGANLTGLPALSFPAGF-EGHLPVGLQLLAPWGEDERLLRAALAFEE 456 >gi|284162409|ref|YP_003401032.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Archaeoglobus profundus DSM 5631] gi|284012406|gb|ADB58359.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Archaeoglobus profundus DSM 5631] Length = 453 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 195/477 (40%), Positives = 287/477 (60%), Gaps = 28/477 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E R+RL S+ +L+ + IE S ++NA+I + ++A AEE DK + G Sbjct: 1 MKVREWRERLESE--RCYDLIAELFERIERS--KLNAFITLNKEEALKKAEEFDKGKLKG 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ +KD +TKG+ T S +L + P +++ V ++L GA+++GK NMDE Sbjct: 57 K---LAGIPVAVKDNISTKGLRTTCASKMLANYVPPFDAHVVERLKQEGAIIIGKTNMDE 113 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG++ ETSY+G V +P+ D G S G S A ++G+DTGGSIR Sbjct: 114 FAMGTTTETSYFGVVRNPY------DLERVAGGSSGGSGACLHNESVLALGSDTGGSIRC 167 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G G+KPTYG SR G+I +A SL+Q G + V D A+LL+ IAG DE D+T Sbjct: 168 PASFCGVYGLKPTYGLVSRYGLIPYANSLEQIGPMANCVEDLALLLEVIAGKDERDSTNA 227 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + D++ + + VGI KE + + K +++ + +++ ++VE+SL Sbjct: 228 GV---DFK--FEPEDKRYRVGIIKEMSAN---DDVMKVFEEVVDIVRER-HEVVEVSLSS 278 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMI 365 +YALPAYYII+ +EASSNLARYDGVRYG +E D Y R+ GFG+EVK RIM+ Sbjct: 279 LKYALPAYYIIAMSEASSNLARYDGVRYGYALEKLDTWTRYFAKVRAEGFGEEVKRRIML 338 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GTY LS+ Y +YL+A ++RTL++ DF AF+ D+++ PT PT AF +G+ ++ Sbjct: 339 GTYALSAGYYGRYYLKALRVRTLVRNDFQRAFKH-CDLLIAPTMPTPAFKIGEIQD---P 394 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + DV TV N+AG+PA+S+P K +P+GLQ++G F E + S +EK Sbjct: 395 LTMYKMDVNTVPANLAGIPALSMPMGFV-KGLPVGLQVMGNYFEENKILSFALELEK 450 >gi|315636985|ref|ZP_07892209.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arcobacter butzleri JV22] gi|315478815|gb|EFU69524.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arcobacter butzleri JV22] Length = 452 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 187/416 (44%), Positives = 269/416 (64%), Gaps = 15/416 (3%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPI IKD K S+IL G+ Y +TV +KL G G+ NMDEFAMGSS Sbjct: 48 GIPIAIKDNINVKNWEITCSSNILKGYISPYNATVIEKLEKAGLSPFGRTNMDEFAMGSS 107 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+S YG ++P ++ PGGSSGGS+AAVAG + A++GTDTGGSIRQPA++ G Sbjct: 108 TESSCYGKTLNPID-----NEKVPGGSSGGSAAAVAGGIAIAALGTDTGGSIRQPAAYCG 162 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR GI +++ SLDQ G IT+ V D+AIL I+GYD D+T N+ + Sbjct: 163 CVGMKPTYGRVSRYGITAYSSSLDQCGPITQNVEDAAILYDIISGYDPMDSTSANI---N 219 Query: 253 YERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 YE + S + +T+ + + + SP I K +Q+ ++ L++AG KI+ ++ TQ Sbjct: 220 YEAVTPKLNSDKKLTIAVIDNF-VSQASPAIQKGFQKAVNALEEAGHKIIHKNMLDTQKI 278 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + YYI++ AEAS+NLAR+DGVR+G R + +MY T+S GFG EV+ RIM+G++VL Sbjct: 279 VSTYYIVATAEASANLARFDGVRFGNRKGDAGLKDMYVQTKSQGFGHEVQKRIMLGSFVL 338 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K+R LIK ++++ F + D+IL+P PT+A G + S+ Sbjct: 339 SSGYYDAYYIKAQKVRHLIKDEYSKIFSEA-DLILSPVAPTTAPKFGSFKT---SLEMYL 394 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T++VN+AGLPAIS+P E MP+GLQ I + E+TLF +EK Y Sbjct: 395 SDIYTISVNLAGLPAISLPVDKDEDGMPIGLQFIANAYEEQTLFDGALSLEKAINY 450 >gi|317488465|ref|ZP_07947016.1| hypothetical protein HMPREF1023_00714 [Eggerthella sp. 1_3_56FAA] gi|325831891|ref|ZP_08164988.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Eggerthella sp. HGA1] gi|316912397|gb|EFV33955.1| hypothetical protein HMPREF1023_00714 [Eggerthella sp. 1_3_56FAA] gi|325486212|gb|EGC88664.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Eggerthella sp. HGA1] Length = 562 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 197/482 (40%), Positives = 288/482 (59%), Gaps = 18/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E R L SKD SA E+ +S + + + +A++E Q A A D + G Sbjct: 11 MGVREIRAGLASKDFSAREIAESSLARVRALDGATHAFLETTEQLALRQAAALDAAVAAG 70 Query: 67 --DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 DA L G+P+ KD +G HT S +L + + +T Q+ + G + LGKLN Sbjct: 71 TLDACGPLAGVPVAFKDNMNLEGTHTTCSSAMLANYVSPFTATCVQRTIEAGGIPLGKLN 130 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFA GSS ETS +G +PW PGGSSGGS+AAV L A ++G+DTGGS Sbjct: 131 MDEFAFGSSTETSAFGSTRNPWDL-----SRVPGGSSGGSAAAVGAGLAAITLGSDTGGS 185 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQP SF G V +KPTYG SR G+++F SLDQ G TR+V D+A L AIAG D D Sbjct: 186 IRQPGSFCGAVAVKPTYGVVSRYGVVAFGSSLDQVGPFTRSVEDAAFALNAIAGRDVLDC 245 Query: 244 TCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T +L V D+ L + ++GM +G +P L+ + ++ + L+ GA IVE+ Sbjct: 246 TSQDLDV-DFTANLAEGVKGMRIGVVPAFMEAQGLTDEVKAKVEEAVEHLRALGADIVEV 304 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 LP+ Q A+ AYY++ P EA SNLAR+D VRYG G KD+ YE +R+ GFG E + Sbjct: 305 ELPNAQAAMSAYYVLGPCEAFSNLARFDSVRYGYCDPGHKDLGGQYEASRAKGFGPEARR 364 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+G+Y+LS+ YD++Y A+++RTLI +D+ A+EQ VD I+ P +P +AF G+ + Sbjct: 365 RIMLGSYLLSAGVYDTYYYPAQQVRTLITQDYARAYEQ-VDCIVAPVSPRTAFTFGEVSD 423 Query: 422 NSGSMGHIY-NDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQI 479 + +Y +D+FT+++N+AG +S+P L + ++P+G+QLI F+++ + V Sbjct: 424 PT----DMYLSDMFTISINIAGNGGMSLPVGLGAQTQLPVGVQLISPQFKDQNMLRVAAA 479 Query: 480 IE 481 +E Sbjct: 480 LE 481 >gi|218295557|ref|ZP_03496370.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermus aquaticus Y51MC23] gi|218244189|gb|EED10715.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermus aquaticus Y51MC23] Length = 471 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 191/480 (39%), Positives = 301/480 (62%), Gaps = 25/480 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E R ++ ++S +E+ ++Y++ + + + A++ + + E +R+ Sbjct: 1 MLAHEIRAQVARGELSPLEVAEAYLRRVRELDPGLKAFLTLNERLL-----EEARRV--- 52 Query: 67 DARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 RDL G+ + +KD ATKG+ T A S +L+ F P Y++T +L GA++LGK N+ Sbjct: 53 -ERDLPLAGLLVAVKDNIATKGLRTTAGSRLLENFVPPYDATAVARLKAQGALVLGKTNL 111 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEF MGSS E S + P +P+ D + PGGSSGGS+AAVA L ++G+DTGGS+ Sbjct: 112 DEFGMGSSTEHSAFFPSKNPF---DPSR--VPGGSSGGSAAAVAADLAPLALGSDTGGSV 166 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G G+KPTYGR SR G++++A SL+ G + R+VRD A+L+ A+AG D DAT Sbjct: 167 RQPASFCGVYGLKPTYGRVSRFGLVAYASSLEGIGPMARSVRDLALLMDAMAGLDPMDAT 226 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++LP P ++ AL++ + + +G+ +E L SP +++ ++ + + G ++ E+S Sbjct: 227 SLDLP-PRFQEALEEPLPPLRLGVVRE-GLSGNSPGVERALEEALGVFQGLGLRVKEVSW 284 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P AL AYYI++PAEASSNLARYDG +G R EG+++ ++ E TR+ FG EVK R++ Sbjct: 285 PSLPLALAAYYILAPAEASSNLARYDGTLFGTRAEGEEVWQVVEATRA-RFGLEVKRRVL 343 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT+VLSS Y+++Y RA+ R +K + F++ VD++L PTTP AFPLG + Sbjct: 344 VGTFVLSSGYYEAYYERAQAFRARLKAEARALFQE-VDLLLLPTTPHPAFPLGGRPD--- 399 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + D++TV N+ GLPA+S+PA E +P+GLQL+ P+ ++ L + +EA Sbjct: 400 PLAMYREDLYTVGANLTGLPALSLPAGF-EGHLPVGLQLLA-PWGKDELLLRAALAHEEA 457 >gi|196006217|ref|XP_002112975.1| hypothetical protein TRIADDRAFT_25932 [Trichoplax adhaerens] gi|190585016|gb|EDV25085.1| hypothetical protein TRIADDRAFT_25932 [Trichoplax adhaerens] Length = 482 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 189/488 (38%), Positives = 289/488 (59%), Gaps = 24/488 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQM-NAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 LR ++ EL S + + N+ + N ++ ++ +A S++R+ G L+G Sbjct: 1 LREGQLTVSELCSSCLAIADKYNAFVYNTDQNIITEQIKA----SEERLRKGQPLGPLDG 56 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP +KD F+TKGI T S L + P +TV Q+L D G +++GK N+DEFAMG++N Sbjct: 57 IPFAVKDNFSTKGIKTTCASRTLFEYVPPLNATVVQRLLDQGGILIGKTNLDEFAMGTAN 116 Query: 134 ETSYYGPVISPWRSMDSTDK---FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +GP ++PW DSTDK + GGSSGGS+AAVA + ++G+DTGGS+R PA++ Sbjct: 117 AISEFGPALNPWPLEDSTDKSQRYLAGGSSGGSAAAVAAGMSLVALGSDTGGSVRLPAAW 176 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPTYGR SR G+I A S D GI+ R+V+D ++ + +AG+D DAT P+ Sbjct: 177 CGLAGLKPTYGRLSRYGLIPLASSFDAPGIVARSVQDIKLVYEIVAGHDPKDATSSRRPI 236 Query: 251 PDYERALDQS-------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + L++S + T+GI KE+ + L I ++W + L+ GA+IV+IS Sbjct: 237 KCQDHQLEESANVADKPLSMFTIGIAKEHHIAELDKEILESWSETTEMLESLGARIVQIS 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHR 362 LPH+ +P Y +++ E SSN+ARYDG++YG R G+ E+Y +R GFG V+ R Sbjct: 297 LPHSYLVMPCYIVLTSVEVSSNMARYDGLQYGYRSANGETTDEVYGQSREEGFGPAVRRR 356 Query: 363 IMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG--KE 419 I+ GTY S R YL +A+K+R LI D+ AF G+D+IL+P+ T A + +E Sbjct: 357 ILAGTY-FSLRSNRGRYLEQAQKVRRLILNDYKNAFGNGIDMILSPSVLTVADAVRPYEE 415 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +N S+ H D + N+AG+P++ +P +K +P+ + L+ FRE LF VG I Sbjct: 416 QNIVESLHH---DFYLAGANLAGIPSLVIPTKTAKKGLPISMSLVAPSFRENRLFDVGCI 472 Query: 480 IEKEAGYF 487 +E E G+ Sbjct: 473 LENELGFI 480 >gi|296272964|ref|YP_003655595.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arcobacter nitrofigilis DSM 7299] gi|296097138|gb|ADG93088.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Arcobacter nitrofigilis DSM 7299] Length = 453 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 180/414 (43%), Positives = 267/414 (64%), Gaps = 11/414 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPI IKD K S+IL G+ Y++TV L G G+ NMDEFAMGS+ Sbjct: 49 GIPIAIKDIINVKDWSITCGSNILKGYVSPYDATVITNLRKAGLSPFGRANMDEFAMGST 108 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +TS YG ++P+ ++ T GGSSGGS+AAVA + A++GTDTGGS+RQPA++ G Sbjct: 109 TDTSCYGKTLNPYD-----NEKTAGGSSGGSAAAVADGIAVAALGTDTGGSVRQPAAYCG 163 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR GI +++ SLDQ G IT+ V D+AIL I+G+D D+T ++ Sbjct: 164 VVGMKPTYGRVSRYGITAYSSSLDQCGPITQNVEDAAILYDIISGHDPMDSTSADVEYEA 223 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 LD + + +T+ + + + SP I K +++ + L++AG KI+ ++ T + Sbjct: 224 VAAKLDSN-RKLTIAVIDNF-VSQASPAIQKGFEKAVKVLEEAGHKIIHKNMLDTDKIVS 281 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEAS+NLAR+DGVR+G R + +MY T+S GFG EV+ RIM+G++VLSS Sbjct: 282 TYYIIATAEASANLARFDGVRFGNRKGDAGLKDMYTQTKSQGFGPEVQKRIMLGSFVLSS 341 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y++A+K+R LIK +++ F++ D+IL+P PT+A G + S+ +D Sbjct: 342 GYYDAYYIKAQKVRHLIKDEYSAIFDEA-DLILSPVAPTTAPKFGSFKT---SLEMYLSD 397 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ++T++VN+AGLPAIS+P E MP+GLQLIG+ + E+T+F +EK Y Sbjct: 398 IYTISVNLAGLPAISLPVDKDEDGMPVGLQLIGKAYDEQTVFDGALSLEKAVNY 451 >gi|325475574|gb|EGC78750.1| hypothetical protein HMPREF9353_00002 [Treponema denticola F0402] Length = 485 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 181/491 (36%), Positives = 286/491 (58%), Gaps = 26/491 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRI 63 + ++ RD+L++K++S+++++ ++ E +N ++E + A A+++D+ I Sbjct: 5 LTFTQLRDKLKNKELSSLQILKAFKDEYEKDLKHPLPLNGFVEFF-EDAEEHAKKADELI 63 Query: 64 ING---DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G D + L G+PI +KD + G CS L G+ Y +TV +L + GAV++G Sbjct: 64 AQGVSFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATVIDRLLEAGAVLMG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 ++NMDE AMGSS E S YGP +P + TPGGSSGGS+A VAG S+GT+T Sbjct: 124 RINMDELAMGSSTEFSCYGPSRNPVDR-----ERTPGGSSGGSAAVVAGNQAPFSLGTET 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PAS+ G G+KPTYG SR G+++F+ SLDQ G+ + D A+ L +AG DE Sbjct: 179 GGSVRLPASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADIALGLAVMAGKDE 238 Query: 241 CDATCVN------LPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLK 293 D T L + Y + + I + + IPKE+ L P + + + + +WL Sbjct: 239 KDETSEEADFSSLLKLSAYSK---EEIASLKIAIPKEFLNTQGLDPEVKQVFDELCAWLT 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRS 352 GAK+ E+S+P + ++P YY ++ +EA+SNL+R DG+R+GLR + GK E+Y TRS Sbjct: 296 KNGAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRS 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI+ G YVLS Y ++ +R I + E Q D I+ PT P Sbjct: 356 EGFGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVL-QKYDFIICPTAPAP 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AF L ++ ++ +M +D+FT VN+A +P++SVPA + +P+G+Q G+ F E+ Sbjct: 415 AFKLNEKVDDPIAM--YLSDLFTTFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDR 472 Query: 473 LFSVGQIIEKE 483 + + + E++ Sbjct: 473 ILKLAKAWEED 483 >gi|187479648|ref|YP_787673.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Bordetella avium 197N] gi|109829631|sp|Q2KU72|GATA_BORA1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|115424235|emb|CAJ50788.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bordetella avium 197N] Length = 510 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 191/424 (45%), Positives = 255/424 (60%), Gaps = 25/424 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIPI KD F T+G + A S +L + +++TV ++L GAV LGKLN DEFAMG Sbjct: 74 LAGIPIAHKDAFVTRGWRSTAGSKMLRDYLSPFDATVVERLQAAGAVSLGKLNCDEFAMG 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S NE S +GP +PW SSGGS+AAVA L A + GTDTGGS+RQPA+ Sbjct: 134 SGNENSAFGPARNPWDLAAVPGG-----SSGGSAAAVAARLVAGATGTDTGGSVRQPAAL 188 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV---- 246 G GIKPTYG SR G+I+F SLDQAG + + RD LL ++G+D DAT + Sbjct: 189 CGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMSGFDPRDATSLERCD 248 Query: 247 ---NLP----------VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 N P Y+ A Q ++G+ +G+P E+ L+P + + + + Sbjct: 249 DAANAPGRIRAAFDAAQNGYQAAGSQPLKGLRIGVPAEFFGAGLTPDVAAAVEAALRQFE 308 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS 352 GA+ V ISLP T+ A+PAYY+I+PAEASSNLAR+DGVRYG R E D+ EM +R+ Sbjct: 309 ALGAERVAISLPRTELAIPAYYVIAPAEASSNLARFDGVRYGHRAAEYSDLNEMISRSRA 368 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI+IG YVLS YD++YL+A+++R LI +DF AF DVI+ P P+ Sbjct: 369 EGFGDEVKRRILIGAYVLSHGYYDAYYLQAQRLRRLIAQDFQRAFAGQCDVIMGPVAPSV 428 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A +G EN DV+T+ V++AGLPA+SVP P+GLQ+IG F E Sbjct: 429 AKNIG--ENRDDPTADWLADVYTLGVSLAGLPAMSVPCGFGAAGRPVGLQIIGNYFDEGR 486 Query: 473 LFSV 476 L ++ Sbjct: 487 LLAI 490 >gi|9651490|gb|AAF91176.1|AF202447_1 glu/asp-tRNA amidotransferase subunit A [Thermus thermophilus] Length = 471 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 191/476 (40%), Positives = 291/476 (61%), Gaps = 20/476 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E R R+ ++S +E+ +Y++ ++ + + A++ + ++ AE D + Sbjct: 1 MLAHEIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLSL-NERLLEEAEAVDPGL--- 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+ + +KD AT+G+ T A S +L+ F P YE+T +L GA++LGK N+DE Sbjct: 57 ---PLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDE 113 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSS E S + P +P+ D+ PGGSSGGS+AA+A L ++G+DTGGS+RQ Sbjct: 114 FGMGSSTEHSAFFPTKNPF----DPDR-VPGGSSGGSAAALAADLAPLALGSDTGGSVRQ 168 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G G+KPTYGR SR G+I++A SLDQ G + R+VRD A+L+ A+AG D DAT + Sbjct: 169 PAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAVAGPDPLDATSL 228 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +LP P ++ AL+ + + +G+ +E L SP +++ ++ + ++ G E+S P Sbjct: 229 DLP-PRFQEALEGPLPPLRLGVVREA-LAGNSPGVERALEEALKVFRELGLSGREVSWPS 286 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 AL AYYI++PAEASSNLARYDG YG R G+++ M E TR++ FG EVK R+++G Sbjct: 287 LPQALAAYYILAPAEASSNLARYDGTLYGRRAAGEEVEGMMEATRAL-FGLEVKRRVLVG 345 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+VLSS Y+++Y RA+ R +K + F + VD++L PTTP AFP G + + Sbjct: 346 TFVLSSGYYEAYYGRAQAFRRRLKAEAQALFRE-VDLLLLPTTPHPAFPFGARRD---PL 401 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++TV N+ GLPA+S PA E +P+GLQL+ +E L E+ Sbjct: 402 AMYREDLYTVGANLTGLPALSFPAGF-EGHLPVGLQLLAPWGEDERLLRAALAFEE 456 >gi|315453155|ref|YP_004073425.1| Glu-tRNAGln amidotransferase subunit A [Helicobacter felis ATCC 49179] gi|315132207|emb|CBY82835.1| Glu-tRNAGln amidotransferase subunit A [Helicobacter felis ATCC 49179] Length = 448 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 189/452 (41%), Positives = 277/452 (61%), Gaps = 16/452 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 +A++ S + Y + +AQ + +E + ++ G PI IKD +G Sbjct: 6 EALKLSPQALEEYKQELAQNVQEKSELN--AYVSAPKSSGAGAPILIKDNINVQGWEVTC 63 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL G+ Y +T +L +G G NMDEFAMGS++E+S YGPV +P T Sbjct: 64 GSKILKGYIAPYNATAIDRLHQHGMCAFGLANMDEFAMGSTSESSCYGPVKNPR----DT 119 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 ++ PGGSSGG ++AVAG + A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G++++ Sbjct: 120 NR-VPGGSSGGCASAVAGGVAIAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLVAY 178 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + SLDQ G +T+ VRD A+L AI+G+D D+T V L + L+ + + VG+ +E Sbjct: 179 SSSLDQIGPLTQNVRDCALLFDAISGHDPKDSTSVALEPSQTFKHLNPK-RALRVGVLEE 237 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 D S + K + + L+ G +V + ++ + AYYI+S AEA SNLAR+DG Sbjct: 238 SLKD-ASIEVQKAYADSLHTLEKMGHTLVSQRMGDHKHHIAAYYILSTAEACSNLARFDG 296 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VRYG R+EGK++ E+Y TRS GFG EVK RIM+G +VLSS Y+++YL+A+K R I R Sbjct: 297 VRYGNRLEGKNLKELYVKTRSQGFGAEVKRRIMLGNFVLSSGYYEAYYLKAQKARAHIVR 356 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPA 450 ++ + FE DVI TP P+ + E N + +Y +D++TV VN+AGLPAIS+P Sbjct: 357 EYKKLFES-ADVIFTPVAPS----IAPEFNAHATPLEMYLSDIYTVGVNLAGLPAISLPV 411 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A K+P+G+Q IG F E+ + V +E+ Sbjct: 412 AY-HGKLPIGMQFIGPAFEEQQILDVAYGLEE 442 >gi|189237101|ref|XP_001811710.1| PREDICTED: similar to glutamyl-tRNA(Gln) amidotransferase subunit A [Tribolium castaneum] Length = 501 Score = 316 bits (809), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 186/476 (39%), Positives = 280/476 (58%), Gaps = 9/476 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L I+A +L+ + ++ + N + NA++ + +A+ +EES R R L+GI Sbjct: 16 LNEGKIAATDLIKASLEKAQRLN-KYNAFVTITNNEAKKQSEESVSRYDTKKPRSQLDGI 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD F T GI T S +L F P Y STV ++L ++GAV++GK N+D+FAMGS Sbjct: 75 PVAIKDNFCTCGIRTTCGSEMLRNFTPTYNSTVYERLRNSGAVLIGKTNLDQFAMGSGTV 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSA-AVAGFLCAASIGTDTGGSIRQPASFTGT 193 S +GP + W + ++F G S G SA AVA +C A+IG+DTGGS R PAS+ G Sbjct: 135 DSIFGPTKNHWGFTE--EQFHISGGSSGGSAVAVATGMCFAAIGSDTGGSTRNPASYCGL 192 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+I S+D GI+TR V D +L +AG+D D+T + P Sbjct: 193 VGLKPTYGLVSRHGLIPLVNSMDVPGILTRYVDDCVSVLNTVAGFDPKDSTSLTKPYKSI 252 Query: 254 E--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + A SI+ + VGIP EY ++L+ I +TW + ++L + GA + +S+PHT+Y++ Sbjct: 253 KLPSANKLSIKNLKVGIPDEYHCEHLNSEILQTWNEIATFLHENGATVKPVSMPHTEYSI 312 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 Y I++ E +SN+ARYDGV +G R E +++ +RS+GF + V++RI+ G Y L Sbjct: 313 VCYSILNQCEVASNMARYDGVEFGFRAKENSSTEKLFATSRSLGFNEVVRNRILTGNYFL 372 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 +R YD ++ +A K+R LI +DF +EQ V V+LTPTT T+A + Sbjct: 373 LTRNYDKYFNKALKVRRLILQDFDNVWEQ-VQVLLTPTTLTTAPLYKDFAQKTNREQCAL 431 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D T NMAG+PA+++P L MP+ LQL+G+ E L +V + IE + Sbjct: 432 QDYCTQPANMAGIPAVTIPVKLSSNGMPISLQLMGRNLSEPMLLAVAKFIENAVQF 487 >gi|322797871|gb|EFZ19768.1| hypothetical protein SINV_02757 [Solenopsis invicta] Length = 521 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 190/473 (40%), Positives = 265/473 (56%), Gaps = 27/473 (5%) Query: 41 MNAYIEV---VAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILD 97 +NAYI V VA++ + A+E +R N L+GIPI +KD + KG T S +L Sbjct: 41 LNAYITVTSDVAEEQASVADERQRR--NLLLGQLDGIPIAVKDNYCVKGKPTTCASRMLA 98 Query: 98 GFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW------------ 145 F P Y +T+ +KL GAV++GK N+DEFAMGS S YGP + W Sbjct: 99 NFSPGYNATIYEKLRAQGAVLIGKTNLDEFAMGSGTIDSLYGPTKNLWGSEVLSQFYSYR 158 Query: 146 --------RSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 R + D + GGSSGGS+ AVA C A++G+DTGGS R PAS+ G VG+ Sbjct: 159 SDGSQVTTRKLHEKDAWRIAGGSSGGSAVAVATGTCYAALGSDTGGSTRNPASYCGLVGL 218 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+I S+D GI+ RTV D ++L AIAG D+ D T V + Sbjct: 219 KPTYGLVSRYGLIPLLNSMDVPGILARTVDDVVLILNAIAGPDQADPTTVQRKYVPINLS 278 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 I + +GIPKEYR+ +S I+ W + L++AGA +V +SLPHT Y++ Y + Sbjct: 279 ETIDISNLRIGIPKEYRVQGISEEIEGCWDEVSRLLEEAGASVVPVSLPHTDYSIVCYSV 338 Query: 317 ISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 ++ + +SNLA YDG+ YG R E E+Y+ TRS GF VK RI++G Y L S Y Sbjct: 339 LNRCDVASNLACYDGIEYGHRADEWSSAHELYKKTRSEGFNDVVKGRILVGNYFLLSENY 398 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 + +Y++A K+R LI +DF + +D++LTPTT T A + + D T Sbjct: 399 EKYYVKAMKMRRLIAQDFDVLWNNNIDLLLTPTTLTEAPCYNEFIQLDNQTQCLIQDYCT 458 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 NMAGLPAI+VP L +PL LQL+ F E+ L +V + IE+ + + Sbjct: 459 QPANMAGLPAINVPIKLSRNGLPLSLQLMAPLFHEKRLLTVAKKIEQSVQFSK 511 >gi|157737268|ref|YP_001489951.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Arcobacter butzleri RM4018] gi|166989676|sp|A8ETK8|GATA_ARCB4 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157699122|gb|ABV67282.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Arcobacter butzleri RM4018] Length = 453 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 186/416 (44%), Positives = 268/416 (64%), Gaps = 15/416 (3%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPI IKD K S+IL G+ Y +TV +KL G G+ NMDEFAMGSS Sbjct: 49 GIPIAIKDNINVKNWEITCSSNILKGYISPYNATVIEKLEKAGLSPFGRTNMDEFAMGSS 108 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+S YG ++P ++ PGGSSGGS+AAVAG + A++GTDTGGSIRQPA++ G Sbjct: 109 TESSCYGKTLNPID-----NEKVPGGSSGGSAAAVAGGIAIAALGTDTGGSIRQPAAYCG 163 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR GI +++ SLDQ G IT+ V D+AIL I+GYD D+T N+ + Sbjct: 164 CVGMKPTYGRVSRYGITAYSSSLDQCGPITQNVEDAAILYDIISGYDPMDSTSANI---N 220 Query: 253 YERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 YE + S + +T+ + + + SP I K +Q+ ++ L++ G KI+ ++ TQ Sbjct: 221 YEAVTPKLNSDKKLTIAVIDNF-VSQASPAIQKGFQKAVNALEEGGHKIIHKNMLDTQKI 279 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + YYI++ AEAS+NLAR+DGVR+G R + +MY T+S GFG EV+ RIM+G++VL Sbjct: 280 VSTYYIVATAEASANLARFDGVRFGNRKGESGLKDMYVQTKSQGFGHEVQKRIMLGSFVL 339 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K+R LIK ++++ F + D+IL+P PT+A G + S+ Sbjct: 340 SSGYYDAYYIKAQKVRHLIKDEYSKIFSEA-DLILSPVAPTTAPKFGSFKT---SLEMYL 395 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T++VN+AGLPAIS+P E MP+GLQ I + E+TLF +EK Y Sbjct: 396 SDIYTISVNLAGLPAISLPVDKDEDGMPIGLQFIANAYEEQTLFDGALSLEKAINY 451 >gi|270007238|gb|EFA03686.1| hypothetical protein TcasGA2_TC013788 [Tribolium castaneum] Length = 492 Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 186/476 (39%), Positives = 280/476 (58%), Gaps = 9/476 (1%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L I+A +L+ + ++ + N + NA++ + +A+ +EES R R L+GI Sbjct: 16 LNEGKIAATDLIKASLEKAQRLN-KYNAFVTITNNEAKKQSEESVSRYDTKKPRSQLDGI 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD F T GI T S +L F P Y STV ++L ++GAV++GK N+D+FAMGS Sbjct: 75 PVAIKDNFCTCGIRTTCGSEMLRNFTPTYNSTVYERLRNSGAVLIGKTNLDQFAMGSGTV 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSA-AVAGFLCAASIGTDTGGSIRQPASFTGT 193 S +GP + W + ++F G S G SA AVA +C A+IG+DTGGS R PAS+ G Sbjct: 135 DSIFGPTKNHWGFTE--EQFHISGGSSGGSAVAVATGMCFAAIGSDTGGSTRNPASYCGL 192 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G+I S+D GI+TR V D +L +AG+D D+T + P Sbjct: 193 VGLKPTYGLVSRHGLIPLVNSMDVPGILTRYVDDCVSVLNTVAGFDPKDSTSLTKPYKSI 252 Query: 254 E--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + A SI+ + VGIP EY ++L+ I +TW + ++L + GA + +S+PHT+Y++ Sbjct: 253 KLPSANKLSIKNLKVGIPDEYHCEHLNSEILQTWNEIATFLHENGATVKPVSMPHTEYSI 312 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 Y I++ E +SN+ARYDGV +G R E +++ +RS+GF + V++RI+ G Y L Sbjct: 313 VCYSILNQCEVASNMARYDGVEFGFRAKENSSTEKLFATSRSLGFNEVVRNRILTGNYFL 372 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 +R YD ++ +A K+R LI +DF +EQ V V+LTPTT T+A + Sbjct: 373 LTRNYDKYFNKALKVRRLILQDFDNVWEQ-VQVLLTPTTLTTAPLYKDFAQKTNREQCAL 431 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D T NMAG+PA+++P L MP+ LQL+G+ E L +V + IE + Sbjct: 432 QDYCTQPANMAGIPAVTIPVKLSSNGMPISLQLMGRNLSEPMLLAVAKFIENAVQF 487 >gi|257790827|ref|YP_003181433.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Eggerthella lenta DSM 2243] gi|257474724|gb|ACV55044.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Eggerthella lenta DSM 2243] Length = 562 Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 197/482 (40%), Positives = 288/482 (59%), Gaps = 18/482 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E R L SKD SA E+ +S + + + +A++E Q A A D + G Sbjct: 11 MGVREIRAGLASKDFSAREIAESSLARVRALDGATHAFLETTEQLALQQAAALDAAVAAG 70 Query: 67 --DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 DA L G+P+ KD +G HT S +L + + +T Q+ + G + LGKLN Sbjct: 71 TLDACGPLAGVPVAFKDNMNLEGTHTTCSSAMLANYVSPFTATCVQRTIEAGGIPLGKLN 130 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFA GSS ETS +G +PW PGGSSGGS+AAV L A ++G+DTGGS Sbjct: 131 MDEFAFGSSTETSAFGSTRNPWDL-----SRVPGGSSGGSAAAVGAGLAAITLGSDTGGS 185 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQP SF G V +KPTYG SR G+++F SLDQ G TR+V D+A L AIAG D D Sbjct: 186 IRQPGSFCGAVAVKPTYGVVSRYGVVAFGSSLDQVGPFTRSVEDAAFALNAIAGRDVLDC 245 Query: 244 TCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T +L V D+ L + ++GM +G +P L+ + ++ + L+ GA IVE+ Sbjct: 246 TSQDLDV-DFTANLAEGVKGMRIGVVPAFMEAQGLTDEVKAKVEEAVEHLRALGADIVEV 304 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 LP+ Q A+ AYY++ P EA SNLAR+D VRYG G KD+ YE +R+ GFG E + Sbjct: 305 ELPNAQAAMSAYYVLGPCEAFSNLARFDSVRYGYCDLGHKDLGGQYEASRAKGFGPEARR 364 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RIM+G+Y+LS+ YD++Y A+++RTLI +D+ A+EQ VD I+ P +P +AF G+ + Sbjct: 365 RIMLGSYLLSAGVYDTYYYPAQQVRTLITQDYARAYEQ-VDCIVAPVSPRTAFTFGEVSD 423 Query: 422 NSGSMGHIY-NDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQI 479 + +Y +D+FT+++N+AG +S+P L + ++P+G+QLI F+++ + V Sbjct: 424 PT----DMYLSDMFTISINIAGNGGMSLPVGLGAQTQLPVGVQLISPQFKDQNMLRVAAA 479 Query: 480 IE 481 +E Sbjct: 480 LE 481 >gi|218754776|ref|ZP_03533572.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis GM 1503] gi|289763192|ref|ZP_06522570.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis GM 1503] gi|289710698|gb|EFD74714.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis GM 1503] Length = 483 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 198/453 (43%), Positives = 296/453 (65%), Gaps = 19/453 (4%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQS----IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALC-EKKMPLG 460 ++ D+ T+ +N+AG +SVP+ L + +P+G Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGLPVG 463 >gi|224438389|ref|ZP_03659316.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter cinaedi CCUG 18818] gi|313144831|ref|ZP_07807024.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter cinaedi CCUG 18818] gi|313129862|gb|EFR47479.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter cinaedi CCUG 18818] Length = 448 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 191/412 (46%), Positives = 263/412 (63%), Gaps = 13/412 (3%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD KG S IL G+ Y ++V +KL N G+ NMDEFAMGS+ Sbjct: 46 GVPILIKDNINVKGWEITCGSKILKGYISPYNASVIEKLHKNKMCGFGRANMDEFAMGST 105 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +E+S YG V +P +D++ PGGSSGGS+AAV G L AS+G+DTGGSIRQPA F G Sbjct: 106 SESSCYGRVKNP---LDASR--VPGGSSGGSAAAVVGGLAIASLGSDTGGSIRQPAGFCG 160 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KP+YGR SR G+++++ SLDQ G IT+ V D+A+LL AI+GYD D+T NLP Sbjct: 161 CVGLKPSYGRVSRYGLVAYSSSLDQIGPITQNVEDAALLLDAISGYDNLDSTSANLPALH 220 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 R LD S + + + K++ D + + + Q I L+ G IVE S+ T+Y + Sbjct: 221 TFRDLD-SNKRYKIAVLKDFLKD-ATQEVQDAYYQTIKILESMGHSIVEKSMLDTRYHIS 278 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 AYYII AEASSNLAR+DGVRYG R + +++ E+Y NTRS FG EVK RI++G++VLSS Sbjct: 279 AYYIICTAEASSNLARFDGVRYGTRAKAENLKEVYLNTRSEYFGDEVKRRILLGSFVLSS 338 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-N 431 YD++YL+A+K+R I D+ EA D IL P PT G S S +Y + Sbjct: 339 GYYDAYYLKAQKVREKICADY-EAILNECDSILLPIAPTLPPKFG----TSHSPLEMYLS 393 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D++T+ VN+AGLPAI +P + + +G+Q IG F E+T+ ++ +EKE Sbjct: 394 DIYTIGVNLAGLPAICIPTMKNAEGLSVGMQFIGGKFEEQTILNIAYGLEKE 445 >gi|195112410|ref|XP_002000766.1| GI22341 [Drosophila mojavensis] gi|193917360|gb|EDW16227.1| GI22341 [Drosophila mojavensis] Length = 508 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 197/497 (39%), Positives = 290/497 (58%), Gaps = 31/497 (6%) Query: 17 RSKDISAVELVDSYI-----------QAIENSNS--QMNAYIEVVAQKARAAAEESDKRI 63 R +S +L +SYI QA+ S + +NA++ + A++A A+ES +R Sbjct: 3 RHLQLSIKQLTESYINGQLSPLSVAEQALAESTNLKTLNAFVCIAAEQALQQAKESVRRY 62 Query: 64 INGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L+G+ + IKD F TK I T S +L F P Y++TV +L + GAV+LGK Sbjct: 63 AEQKPLSSLDGVTVAIKDNFCTKNIATTCASRMLKEFVPPYDATVCSRLKEAGAVLLGKT 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMD+FAMG+ S YGP + W S D + GGSSGGS++AVA LC A+IG+DTG Sbjct: 123 NMDQFAMGAGTVDSIYGPTKNIWSESFSEDNWRIAGGSSGGSASAVAAGLCYAAIGSDTG 182 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PAS+ G VG+KPTYG CSR G+I S+D GI+TR+V D +L IAG D Sbjct: 183 GSTRNPASYCGVVGLKPTYGLCSRYGLIPLVNSMDVPGILTRSVTDCVEVLNTIAGPDIQ 242 Query: 242 DATCVNLPVPDYERAL----DQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+T + P Y++ L DQ ++ + +GIPKEY + LS + +TW + L+ AG Sbjct: 243 DSTTIRRP---YKKLLLPEIDQIDLRSLRIGIPKEYNCEGLSSEVLETWTKVADLLECAG 299 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGF 355 A + ++SLPHT ++ Y I++ E +SN+ARYDG+ YG R + + ++Y +R+ GF Sbjct: 300 ASVRQVSLPHTAASIFVYSILNQCEVASNMARYDGIEYGHRAADERSTEQLYAQSRAEGF 359 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-----QGVDVILTPTTP 410 Q VK RI+ G ++L + YD ++ +A ++R LI DFT+ FE VD++LTPTT Sbjct: 360 NQVVKTRILTGNFLLLRKNYDHYFEKALRVRRLIAEDFTKVFEPATTKHQVDILLTPTTL 419 Query: 411 TSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + A P+ K+ + D T NMAG+PA+S+P L + +PL LQL+ Sbjct: 420 SEA-PVYKDFAALSNRDQCAVQDFCTQPANMAGIPAVSIPIRLSKAGLPLSLQLMSNNLN 478 Query: 470 EETLFSVGQIIEKEAGY 486 E+ L +V + IE + + Sbjct: 479 EQLLLTVARWIEAQVEF 495 >gi|154249906|ref|YP_001410731.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Fervidobacterium nodosum Rt17-B1] gi|154153842|gb|ABS61074.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fervidobacterium nodosum Rt17-B1] Length = 475 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 179/463 (38%), Positives = 272/463 (58%), Gaps = 30/463 (6%) Query: 23 AVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCF 82 + ELV+ ++ I + ++NA+I V E +K GIPIGIKD Sbjct: 41 STELVERSLEVISDEEKRLNAFITV--------KNEIEK-----------GIPIGIKDNI 81 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 KG+ T S IL+G+ Y++TV +KL G +GK N+DEFAMG+S E S +GP Sbjct: 82 NVKGMKTTCASKILEGYVAPYDATVIKKLRVCGYAFVGKTNLDEFAMGASTEYSAFGPTR 141 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +P + G ++ +S V A++G+DTGGSIRQPA+F G VG KPTYG Sbjct: 142 NPHDVERVAGGSSGGSAAAVASGEVI-----AALGSDTGGSIRQPAAFCGVVGFKPTYGL 196 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 SR G+++FA SLDQ G IT+TV DSAIL+ IAG DE DAT V+ + D+ + + + I Sbjct: 197 VSRYGLVAFASSLDQIGPITKTVEDSAILMNIIAGKDENDATTVDRNI-DFTQFVGKQIP 255 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 M + + K+ + + I + + L G + + + +Y++ YYII+P+E Sbjct: 256 KMKIAVAKQSFGEGVEEGIKNRVNEFVQELSRHGHDVDVVDIDEIKYSVATYYIIAPSEV 315 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 SSNL+R+DGV+YGLR+ + EMYE TR +GFG+EV+ RI+IGT+ LS+ YD+++ +A Sbjct: 316 SSNLSRFDGVKYGLRISSDSLREMYEKTRGLGFGEEVRRRILIGTFNLSAAYYDAYFEKA 375 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 +K+R +I FE+ D I+TPT+P AF K ++ + + + D+FT+ N+AG Sbjct: 376 QKVRRVIANKLYSVFEK-YDFIVTPTSPVVAF---KVKSVNDPLVYYMMDIFTIPANLAG 431 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +PAIS+P E +P+G+Q++G F + L +E+ G Sbjct: 432 IPAISIPYGKSE-NLPVGIQIMGPRFSDAKLLGFADWVERNLG 473 >gi|257388040|ref|YP_003177813.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halomicrobium mukohataei DSM 12286] gi|257170347|gb|ACV48106.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halomicrobium mukohataei DSM 12286] Length = 426 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 188/451 (41%), Positives = 266/451 (58%), Gaps = 37/451 (8%) Query: 39 SQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG 98 ++ NAYI SD+ I D L G + +KD +TKG+ T S +L G Sbjct: 3 TEYNAYI-------------SDETIEGADEGPLAGQTVAVKDNISTKGVQTTCGSSMLAG 49 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 + P Y++TV ++L GA + GK NMDEF MG++ ETS YGPV +P + PGG Sbjct: 50 YVPPYDATVVERLTAAGATVPGKTNMDEFGMGTTTETSAYGPVENP-----AAPGHVPGG 104 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS+A VA ++GTDTGGSIR PA+F G VGIKPTYG SR G++++A SL+Q Sbjct: 105 SSGGSAAVVAAGDADMALGTDTGGSIRCPAAFCGVVGIKPTYGLVSRYGLVAYANSLEQI 164 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE-------RALDQSIQGMTVGIPKE 271 G I TV ++A LL+ IAG DE DAT D+E A D + G+++G+P E Sbjct: 165 GPIAPTVEEAAELLEVIAGPDEHDATTR-----DHEGATEGLADAADGDVDGLSIGVPTE 219 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 +D + +T+ I L+ GA E+ LP ++A+ AYY+I+ +EASSNLAR+DG Sbjct: 220 L-VDGADEAVVETFWDAIDELEAQGASYHEVDLPSVEHAVEAYYVIAMSEASSNLARFDG 278 Query: 332 VRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 VRYG EG + E + N R GFG+EVK R+++GTY LS+ +D +Y +A+ R + Sbjct: 279 VRYGQSGGYEG-NWNESFANAREDGFGEEVKRRVLLGTYALSAGYHDKYYKKAQDARAWV 337 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 K+DF A ++ DV+ +PT P +G+ ++ +M D T VN+A LPAISVP Sbjct: 338 KQDFDSALDE-ADVLASPTMPIPPMEMGESLDDPLTM--YLADANTTPVNLANLPAISVP 394 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQII 480 A + +P+GLQL+G F E+ L G + Sbjct: 395 AGETDDGLPVGLQLVGPAFGEKQLIRAGSAL 425 >gi|329946010|ref|ZP_08293697.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328528458|gb|EGF55436.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 513 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 191/480 (39%), Positives = 291/480 (60%), Gaps = 34/480 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGI 78 ++S+ EL +++ I + + A++ V + A + A+ +D G +L G+P+ + Sbjct: 28 EVSSRELTQAHLDRIAAVDGAVGAFLNVDVEHALSQADAADTARKEGRVTSELAGVPVAV 87 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD T+G T A S IL+ + P Y++T+ + L +LGK N+DEFAMG S E S + Sbjct: 88 KDLIVTRGQVTTAASRILEEWVPPYDATLVRNLRAARTPILGKTNLDEFAMGGSTEHSAF 147 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW PGGSSGGS+AAV + ++GTDTGGSIRQPA+ TGTVG+KP Sbjct: 148 GRTSNPWDL-----GRIPGGSSGGSAAAVGSYEAPVAVGTDTGGSIRQPAAVTGTVGVKP 202 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL- 257 TYG SR G+I+ A SLD G + RTV D+A+L IA +D D+T ++ D R + Sbjct: 203 TYGTVSRFGVIAMASSLDTPGPMARTVLDTALLHDVIASHDPLDSTSLS----DAPRGMA 258 Query: 258 --------DQSIQGMTVGIPKEYRLD----YLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + G+ VG+ E LD Y + ++ + L+ AGA++ +SLP Sbjct: 259 AVVRAAQEGRDLTGLRVGVISE--LDGGEGYHEGVV-ASFHAALELLEAAGAQVEAVSLP 315 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILE-MYENTRSIGFGQEVKH 361 H +YAL AYY+I PAEASSNLARYDG+RYGLRVE G E + TR GFG EVK Sbjct: 316 HLEYALDAYYLIMPAEASSNLARYDGMRYGLRVEPGSGPVTAETVMAATRGAGFGDEVKR 375 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++GT+VLS+ YD++Y A+K+RTL++RDF A+++ DV+++PT P +A+ G++++ Sbjct: 376 RIILGTHVLSAGYYDAYYGSAQKVRTLVQRDFAAAWDKA-DVLVSPTAPVTAYRFGEKDD 434 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + DV T+ N+AG+P +S+P+ L + +P+G Q++ ++ L+ G ++E Sbjct: 435 ---PLAMYKLDVTTIPANLAGVPGMSLPSGLSDDGLPVGFQILAPQRADDRLYRAGAVLE 491 >gi|311244244|ref|XP_003121372.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog isoform 2 [Sus scrofa] Length = 435 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 166/411 (40%), Positives = 244/411 (59%), Gaps = 22/411 (5%) Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW---RSMDST 151 +L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + +GPV +PW + Sbjct: 1 MLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGSTDGIFGPVKNPWSYSKQYRGK 60 Query: 152 DKFTPGGSSGGSSAAVAG------------FLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 + G S+ + G F C A++G+DTGGS R PA+ G VG+KP+ Sbjct: 61 KQQKTHGEDEDSNWLITGGSSGGSAAAVSAFTCFAALGSDTGGSTRNPAAHCGVVGLKPS 120 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YG SR G+I S+D GI+TR V D+AI+L +AG+D D+T V PV + Sbjct: 121 YGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGVLAGHDPKDSTTVQDPVKPFMLPSLT 180 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 + + VGIPKEY LS + W + + GAK++E+SLPHT Y++ Y+++ Sbjct: 181 DVSKLCVGIPKEYLTPELSSEVQSLWSKAADLFESEGAKVIEVSLPHTSYSIVCYHVLCT 240 Query: 320 AEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 +E +SN+AR+DG+ YG R + E MY TR GF V+ RI+ G + L Y+++ Sbjct: 241 SEVASNMARFDGLEYGHRCDVDVSTEAMYAATRREGFNDVVRGRILSGNFFLLKENYENY 300 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGSMGHIYNDVFT 435 +++A+K+R LI DF F+ GVDV+LTPTT + A P KE+N + S +D+FT Sbjct: 301 FVKAQKVRRLIANDFVNVFKSGVDVLLTPTTLSEAVPYLEFIKEDNRTRSA---QDDIFT 357 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L +V + EK+ + Sbjct: 358 QAVNMAGLPAVSIPMALSSQGLPVGLQFIGRAFCDQQLLTVAKWFEKQVQF 408 >gi|237752086|ref|ZP_04582566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter winghamensis ATCC BAA-430] gi|229376653|gb|EEO26744.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter winghamensis ATCC BAA-430] Length = 448 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 199/466 (42%), Positives = 277/466 (59%), Gaps = 37/466 (7%) Query: 23 AVELVDSYIQAIENS------NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 A++L IQA++N+ S +NAY+ A E++D +I PI Sbjct: 9 ALKLDKDGIQALKNTLKEKIKASDLNAYV--------GALEDADTDLI----------PI 50 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD KG S IL+G+ Y ++V + L G G+ NMDEFAMGS+ +S Sbjct: 51 AIKDNINVKGWEITCGSKILEGYIAPYNASVIENLKHKGFAPFGRTNMDEFAMGSTTASS 110 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YG ++P + PGGSSGGS+AAVAG + A++G+DTGGSIRQPASF G VG+ Sbjct: 111 CYGKTLNPRNK-----ERVPGGSSGGSAAAVAGGIALAALGSDTGGSIRQPASFCGCVGL 165 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYGR SR G+++++ SLDQ G IT+ V D A+L AIAGYD D+T NL P Sbjct: 166 KPTYGRVSRYGLVAYSSSLDQIGPITQNVSDCALLFDAIAGYDRMDSTSANLESPSTFED 225 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 L+ + + + I E+ L +I +Q+ I L G I E + T Y + AYY+ Sbjct: 226 LNAK-RKLKIAILPEF-LKNADSSIQNAYQKTIDILSQNGHTIFEKQMLDTSYMIAAYYV 283 Query: 317 ISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 I AEASSNLAR+DGVRYG R E ++ E+Y TRS GFG EVK RI++G++VLSS Y Sbjct: 284 ICTAEASSNLARFDGVRYGKRAENLSNLKELYLKTRSQGFGDEVKRRILLGSFVLSSGYY 343 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 D++Y++A+K+RTLI R + E Q DVIL+P P+ AF E + D++T Sbjct: 344 DAYYIKAQKVRTLIARQYEEIL-QDCDVILSPVAPSVAFSF---EACKTPLQMYLEDIYT 399 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + VN+AGLPAIS+P ++ +P+G+Q IG+ F E+TL + +E Sbjct: 400 IGVNLAGLPAISLPVD-SDEGLPIGMQFIGKAFDEQTLLDIALHLE 444 >gi|195400018|ref|XP_002058615.1| GJ14217 [Drosophila virilis] gi|194142175|gb|EDW58583.1| GJ14217 [Drosophila virilis] Length = 508 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 190/473 (40%), Positives = 281/473 (59%), Gaps = 24/473 (5%) Query: 32 QAIENSNS--QMNAYIEVVAQKARAAAEESDKRIINGDARDL---EGIPIGIKDCFATKG 86 QA+++++S +NA++ + A A+ES +R D R L +G+ I IKD F T Sbjct: 29 QALQDASSLKTLNAFVCMATDLALQQAKESAQRY--ADQRSLGSLDGVTIAIKDNFCTSQ 86 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 + T S +L F P Y++TV +L + GAV+LGK N+D+FAMG+ S YGP + W Sbjct: 87 VPTTCASRMLQDFVPPYDATVCARLREAGAVLLGKTNLDQFAMGAGTVDSIYGPTKNIWS 146 Query: 147 SMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 + D + GGSSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG CSR Sbjct: 147 ESFAADNWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLCSR 206 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQS 260 G+I S+D GI+TR+V D +L AIAG D D+T + P +P+ E+ Sbjct: 207 HGLIPLVNSMDVPGILTRSVSDCVEVLNAIAGPDALDSTTIRQPYKKLQLPEVEQI---D 263 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 ++ + +GIPKEY D LS + +TW + L+ AGA + ++SLPHT ++ Y I++ Sbjct: 264 LRSLRIGIPKEYHCDALSTEVLETWTKVADLLECAGASVRQVSLPHTAASIFVYSILNQC 323 Query: 321 EASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 E +SN+ARYDG+ YG R + + ++Y TR+ GF Q VK RI+ G ++L + YD ++ Sbjct: 324 EVASNMARYDGIEYGHRAADERSTEQLYAQTRAEGFNQVVKTRILTGNFLLLRKNYDHYF 383 Query: 380 LRARKIRTLIKRDFTEAFE-----QGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDV 433 +A ++R LI DF + FE + VD++LTPTT + A PL K+ + D Sbjct: 384 EKALRVRRLIAEDFAKVFEASAANEQVDILLTPTTLSEA-PLYKDFAALSNRDQCAVQDF 442 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 T NMAG+PA+S+P L +PL LQL+ E+ L +V + IE + + Sbjct: 443 CTQPANMAGIPAVSIPVRLSTAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|148927886|ref|ZP_01811298.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [candidate division TM7 genomosp. GTL1] gi|147886763|gb|EDK72321.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [candidate division TM7 genomosp. GTL1] Length = 471 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 187/486 (38%), Positives = 277/486 (56%), Gaps = 20/486 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + +A S +RS + SA LVD ++ E + + N +I + A++A+ A+E D Sbjct: 1 MSSIETIATS-----VRSGEASARSLVDEALKKAEGTG-EFNIFISLSAKRAQQRADEID 54 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G L G+P KD F G T A SHIL+ F +++T +KL GA+ + Sbjct: 55 SLVKTGKPVGRLAGVPFVAKDNFLAFGAATTAASHILNNFEAPFQATAIEKLEAEGAICI 114 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+D FA G S E S +GP + + D T S A+ + ++GTD Sbjct: 115 GKANLDAFAHGGSTENSAFGPTRNAY---DKTRVAGGSSGGSAVSVALE--IVPFALGTD 169 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G VG+KPTYG SR G+++ A S D G IT+T+ D+ +++ +AG D Sbjct: 170 TGGSIRQPASFNGVVGVKPTYGTVSRYGVVAMASSTDTIGPITKTIADAELIMDIMAGRD 229 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T +PD+ + + +GI K++ + + + + + I LK G + Sbjct: 230 ANDSTT----LPDFFKPAEVPSDKKRIGIVKQFMDEGVDTEVREIITRQIDMLKSNGHTV 285 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 E+ LP +Y++ YYII PAE +SNLAR+DG+RYG R E + + E+Y +R GF E Sbjct: 286 EEVDLPMVKYSVAMYYIIVPAEIASNLARFDGIRYGRRSEEARTLDEIYGKSRDEGFMDE 345 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 K RIM+G YVLSS +D++Y +A+K RTL+ R F + F + D +L P PTSAF +G Sbjct: 346 NKRRIMVGNYVLSSGYFDAYYRQAQKARTLLIRAFDDVFSE-YDFLLGPVAPTSAFKVG- 403 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 EN S + +DV T N+AGLPA+SVPA E +P+GLQLIG + + + + Sbjct: 404 -ENTSDPIKMYLSDVTTAPANLAGLPAMSVPAGKTETGLPVGLQLIGSRRSDAEMLAFAK 462 Query: 479 IIEKEA 484 +IE+ A Sbjct: 463 MIEEGA 468 >gi|42526092|ref|NP_971190.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Treponema denticola ATCC 35405] gi|81570525|sp|Q73Q68|GATA_TREDE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|41816204|gb|AAS11071.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Treponema denticola ATCC 35405] Length = 485 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 181/491 (36%), Positives = 286/491 (58%), Gaps = 26/491 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRI 63 + ++ RD+L++K++S+++++ ++ E +N ++E + A A+++D+ I Sbjct: 5 LTFTQLRDKLKNKELSSLQILRAFKDEYEKDLKHPLPLNGFVEFF-EDAEEHAKKADELI 63 Query: 64 ING---DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G D + L G+PI +KD + G CS L G+ Y +TV +L + GAV++G Sbjct: 64 AQGVSFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATVIDRLLEAGAVLMG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 ++NMDE AMGSS E S YGP +P +D TPGGSSGGS+A VAG S+GT+T Sbjct: 124 RINMDELAMGSSTEFSCYGPSRNP---VDRAR--TPGGSSGGSAAVVAGNQAPFSLGTET 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PAS+ G G+KPTYG SR G+++F+ SLDQ G+ + D A+ L +AG DE Sbjct: 179 GGSVRLPASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADIALGLAVMAGKDE 238 Query: 241 CDATCVN------LPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLK 293 D T L + Y + + I + + IPKE+ L + + + + +WL Sbjct: 239 KDETSEEADFSSLLKLSAYSK---EEIASLKIAIPKEFLNTQGLDQEVKQVFDELCAWLT 295 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRS 352 GAK+ E+S+P + ++P YY ++ +EA+SNL+R DG+R+GLR + GK E+Y TRS Sbjct: 296 KNGAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDTGKGNDELYIQTRS 355 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI+ G YVLS Y ++ +R I + E Q D I+ PT P Sbjct: 356 EGFGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVL-QKYDFIICPTAPAP 414 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AF L ++ ++ +M +D+FT VN+A +P++SVPA + +P+G+Q G+ F E+ Sbjct: 415 AFKLNEKVDDPIAM--YLSDLFTTFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDR 472 Query: 473 LFSVGQIIEKE 483 + + + E++ Sbjct: 473 ILKLAKAWEEQ 483 >gi|215447284|ref|ZP_03434036.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycobacterium tuberculosis T85] gi|289759137|ref|ZP_06518515.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T85] gi|289714701|gb|EFD78713.1| glutamyl-tRNA(gln) amidotransferase subunit A gatA [Mycobacterium tuberculosis T85] Length = 491 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 198/453 (43%), Positives = 293/453 (64%), Gaps = 18/453 (3%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA--RDLEGIPI 76 K++S+ E+ + + IE ++ +A++ V A +A AAA DK++ G+ L G+P+ Sbjct: 19 KEVSSAEITRACLDQIEATDETYHAFLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F T + T S IL+G+R Y++T+T +L G +LGK NMDEFAMGSS E S Sbjct: 79 ALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENS 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YGP +PW + D+ PGGS GGS+AA+A F +IG+DTGGSIRQPA+ T TVG+ Sbjct: 139 AYGPTRNPW----NLDRV-PGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGV 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++ A SLDQ G RTV D+A+L + IAG+D D+T V+ VPD A Sbjct: 194 KPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGA 253 Query: 257 LDQ----SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++G+ VG+ ++ + + P + +++ + L GA++ E+ PH +AL Sbjct: 254 ARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHAL 313 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRV--EG-KDILEMYENTRSIGFGQEVKHRIMIGTY 368 AYY+I P+E SSNLAR+D +RYGLRV +G + E+ TR+ GFG EVK RIMIGTY Sbjct: 314 AAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTY 373 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ YD++Y +A+K+RTLI RD A+ + VDV+++PTTPT+AF LG++ ++ +M + Sbjct: 374 ALSAGYYDAYYNQAQKVRTLIARDLDAAY-RSVDVLVSPTTPTTAFRLGEKVDDPLAM-Y 431 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 ++ D+ T+ +N+AG +SVP+ L GL Sbjct: 432 LF-DLCTLPLNLAGHCGMSVPSGLSPDDGVAGL 463 >gi|119568793|gb|EAW48408.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, isoform CRA_b [Homo sapiens] Length = 437 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 168/413 (40%), Positives = 247/413 (59%), Gaps = 25/413 (6%) Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW---RSMDST 151 +L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + +GPV +PW + Sbjct: 1 MLKGYIPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGSTDGVFGPVKNPWSYSKQYREK 60 Query: 152 DKFTPGGSSGGSSAAVA------------GFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 K P + S + F C A++G+DTGGS R PA+ G VG KP+ Sbjct: 61 RKQNPHSENEDSDWLITGGSSGGSAAAVSAFTCYAALGSDTGGSTRNPAAHCGLVGFKPS 120 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV--PDYERAL 257 YG SR G+I S+D GI+TR V D+AI+L A+AG D D+T V+ P+ P +L Sbjct: 121 YGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPDPRDSTTVHEPINKPFMLPSL 180 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + +GIPKEY + LS + W + + GAK++E+SLPHT Y++ Y+++ Sbjct: 181 -ADVSKLCIGIPKEYLVPELSSEVQSLWSKAADLFESEGAKVIEVSLPHTSYSIVCYHVL 239 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 +E +SN+AR+DG++YG R + E MY TR GF V+ RI+ G + L Y+ Sbjct: 240 CTSEVASNMARFDGLQYGHRCDIDVSTEAMYAATRREGFNDVVRGRILSGNFFLLKENYE 299 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGSMGHIYNDV 433 +++++A+K+R LI DF AF GVDV+LTPTT + A P KE+N + S +D+ Sbjct: 300 NYFVKAQKVRRLIANDFVNAFNSGVDVLLTPTTLSEAVPYLEFIKEDNRTRSA---QDDI 356 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT AVNMAGLPA+S+P AL + +P+GLQ IG+ F ++ L +V + EK+ + Sbjct: 357 FTQAVNMAGLPAVSIPVALSNQGLPIGLQFIGRAFCDQQLLTVAKWFEKQVQF 409 >gi|300813309|ref|ZP_07093664.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512580|gb|EFK39725.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 480 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 187/476 (39%), Positives = 287/476 (60%), Gaps = 18/476 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V + + R++D S VE+ Y + I+ +S++NAYI + ++A A+E D++ N Sbjct: 6 LTVKDLANGYRNRDFSVVEVTKEYFKEIKEKDSKINAYISLNEEEALKQAKEIDEKFKNR 65 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIPI IKD A KG+ S +L+ + Y++ V +K+ +N ++LGK+N+D Sbjct: 66 DELTSLAGIPISIKDNIAVKGLRMTCASKMLENYVSPYDAEVVKKIKENNGIILGKVNLD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG+S +TSY+G +P +D++ GGSSGGS+A+VAG + A S+GTDTGGS+R Sbjct: 126 EFAMGASTKTSYFGVTKNP---LDTS--LVSGGSSGGSAASVAGKMAAISLGTDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +P+SF G VG+KPTYG SR G+ S A + DQ G+I + V D+A+LL+ + G DE DAT Sbjct: 181 EPSSFCGLVGMKPTYGTISRYGVSSMANTFDQVGVIGKNVSDTAMLLQMLEGRDEKDATS 240 Query: 246 VNLPVP----DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V P YE +D +++G+ V IP Y L + + + I L GA + E Sbjct: 241 VGNPSLKEEFSYENVID-NLKGLKVAIPSIYMDMDLDKDVKAEFDKAIDILLKNGAIVEE 299 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 + +Y + Y+I+ E +SN+AR+D V YG R + +I EMY +R+ GFG+EVK Sbjct: 300 YPIESLKYVIETYHILVNGEIASNMARFDSVIYGHRTDDFSNIEEMYRKSRAEGFGEEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGT++LS D Y +A ++R LIKRD + F + D+++ PT P F + Sbjct: 360 RRIMIGTHILSLDLADEFYYKALRVRGLIKRDMEKMF-KDYDIMICPTYPIHPFKI---- 414 Query: 421 NNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +N+ S IY D+FT+ NM G P+IS+P EK + +G++ + F++ L + Sbjct: 415 DNNMSPVEIYQGDLFTIPANMVGSPSISIPMPKNEKGLSVGIEFTAKRFKDRELLN 470 >gi|118474307|ref|YP_891787.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter fetus subsp. fetus 82-40] gi|261886215|ref|ZP_06010254.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter fetus subsp. venerealis str. Azul-94] gi|166217656|sp|A0RNK4|GATA_CAMFF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118413533|gb|ABK81953.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter fetus subsp. fetus 82-40] Length = 453 Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 193/469 (41%), Positives = 283/469 (60%), Gaps = 30/469 (6%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 +L S DI V+L + I++ N Q+ AYIE ++ N D D G Sbjct: 9 KLSSSDI--VKLRKNLKDKIKD-NRQLGAYIE---------------QLTNSDISDEYAG 50 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD K +CS IL G+ Y +TV +KL G G+ NMDEFAMGS+ Sbjct: 51 VPIAIKDNIQVKNWSITSCSKILQGYVAPYHATVVEKLLKAGLAPFGRTNMDEFAMGSTT 110 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E+S+YG ++P +D T PGGSSGGS+AAV+ L A++G+DTGGSIRQPA+F G Sbjct: 111 ESSFYGKTLNP---LDHTR--VPGGSSGGSAAAVSAGLAIAALGSDTGGSIRQPAAFCGC 165 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KPTYGR SR G+ +++ SLDQ G ITR+V D+A+L IAG+D D+T NL Sbjct: 166 VGFKPTYGRVSRYGLGAYSSSLDQIGPITRSVEDAALLYDIIAGHDPKDSTSSNLENIST 225 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L+ S + +T+ + K Y +D S + + + + LK+AG I+ L +++Y + A Sbjct: 226 SDKLN-SDRKLTIAVIKNY-VDGASQDVKDSLYKVVDKLKEAGHNIIYKDLSNSKYDIAA 283 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YYII+ AEAS+NL+RYDGVRYG R + + +MY TR GFG EV+ R+++GT+VLSS Sbjct: 284 YYIIATAEASANLSRYDGVRYGRRADSNSLGQMYSKTRGEGFGVEVQRRMLLGTFVLSSG 343 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y++A+K R IK ++ E + D++L P P+ A+ G+ S + +D+ Sbjct: 344 YYDAYYIKAQKARAFIKLEYEEILNEA-DIMLMPVAPSVAYKFGEL---SDPLSAYLSDI 399 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +T+ VN+AGLPAI+VP + + + QLIG ++E+ + +EK Sbjct: 400 YTIGVNLAGLPAITVPVQSDKNGLNISAQLIGGAWKEQDVLDAAFGLEK 448 >gi|282882933|ref|ZP_06291538.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Peptoniphilus lacrimalis 315-B] gi|281297344|gb|EFA89835.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Peptoniphilus lacrimalis 315-B] Length = 480 Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 186/476 (39%), Positives = 287/476 (60%), Gaps = 18/476 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V + + R++D S VE+ Y + I+ +S++NAYI + ++A A+E D++ N Sbjct: 6 LTVKDLANGYRNRDFSVVEVTKEYFKEIKEKDSKINAYISLNEEEALKQAKEIDEKFKNR 65 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIPI IKD A KG+ S +L+ + Y++ V +K+ +N ++LGK+N+D Sbjct: 66 DELTSLAGIPISIKDNIAVKGLRMTCASKMLENYVSPYDAEVVKKIKENNGIILGKVNLD 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG+S +TSY+G +P +D++ GGSSGGS+A+VAG + A S+GTDTGGS+R Sbjct: 126 EFAMGASTKTSYFGVTKNP---LDTS--LVSGGSSGGSAASVAGKMAAISLGTDTGGSVR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +P+SF G VG+KPTYG SR G+ S A + DQ G+I + V D+A+LL+ + G DE DAT Sbjct: 181 EPSSFCGLVGMKPTYGTISRYGVSSMANTFDQVGVIGKNVSDTAMLLQMLEGRDEKDATS 240 Query: 246 VNLPVPD----YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V P YE +D +++G+ V IP Y L + + + I L GA + E Sbjct: 241 VGNPSLKEEFSYENVID-NLKGLKVAIPSIYMDMDLDKDVKAEFDKAIDILLKNGAIVEE 299 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 + +Y + Y+I+ E +SN+AR+D V YG R + +I EMY +R+ GFG+EVK Sbjct: 300 YPIESLKYVIETYHILVNGEIASNMARFDSVIYGHRTDDFSNIEEMYRKSRAEGFGEEVK 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGT++LS D Y +A ++R LIKRD + F + D+++ PT P F + Sbjct: 360 RRIMIGTHILSLDLADEFYYKALRVRGLIKRDMEKMF-KDYDIMICPTYPIHPFKI---- 414 Query: 421 NNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +N+ S IY D+FT+ NM G P+IS+P +K + +G++ + F++ L + Sbjct: 415 DNNMSPVEIYQGDLFTIPANMVGSPSISIPMPKNDKGLSVGIEFTAKRFKDRELLN 470 >gi|312880302|ref|ZP_07740102.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Aminomonas paucivorans DSM 12260] gi|310783593|gb|EFQ23991.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Aminomonas paucivorans DSM 12260] Length = 491 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 197/488 (40%), Positives = 288/488 (59%), Gaps = 15/488 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + EL+ V++ L +K SA+E+ + + I + + ++ A + V+ +A A E D Sbjct: 3 LHELSAWQVAQG---LAAKRFSALEVTRACLDRIRSLDGRVKACLTVLEDRALEKAREVD 59 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G D L G+P+ +KD T G T S IL + P Y++T + L + GA++L Sbjct: 60 GALARGEDPGLLSGVPVLVKDNLCTVGTRTTCGSRILGDWEPPYDATAVRLLKEAGAILL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGSS E S +GP +PW + PGGSSGGS+A VA ++G+D Sbjct: 120 GKTNMDEFAMGSSTEHSAFGPTRNPW-----DPERVPGGSSGGSAAGVAAGFAPLALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA+F G G+KPTYG SR G++++A SLDQ G + R V D A+ + IA D Sbjct: 175 TGGSIRQPAAFCGIQGLKPTYGLVSRYGLVAYASSLDQVGPLAREVGDLALGMDVIARPD 234 Query: 240 ECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DAT P + A+ +++G+ +G+ + + I K + +DAGA Sbjct: 235 PLDATSCREERPRFLDAVHTDNLKGLRIGVLGGFDDSAVEEPIRKALVLAARYCQDAGAL 294 Query: 299 IVEISLPHT-QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + E+ LP + +Y L +YYI++PAEASSNLAR+DGVRYG E + ++Y TR FG Sbjct: 295 LSEVRLPLSLEYGLASYYILAPAEASSNLARFDGVRYGSAEEASCLEDLYLRTRGADFGP 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RI+ GTY LSS YD+ YL+A+K R I R+F + F Q VD ILTPT PT AF G Sbjct: 355 EVKRRILTGTYALSSGYYDAFYLKAQKARRAIVREFRQVFGQ-VDAILTPTAPTRAFRQG 413 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ M D FT+ N+AGLPA+S+ A + E +P +Q++G +++ L +G Sbjct: 414 EHLDDPIRM--YLGDAFTLPANLAGLPALSLCAGIAE-GLPTAVQILGPWRKDQRLVRIG 470 Query: 478 QIIEKEAG 485 ++E+ G Sbjct: 471 VMLERAFG 478 >gi|239616733|ref|YP_002940055.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kosmotoga olearia TBF 19.5.1] gi|239505564|gb|ACR79051.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kosmotoga olearia TBF 19.5.1] Length = 475 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 180/468 (38%), Positives = 280/468 (59%), Gaps = 31/468 (6%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 I N ++NA+ E++ R + E L GIP +KD +G T S Sbjct: 30 INTYNDELNAFTEIIPDPDRTSGEGP-----------LNGIPYALKDNILARGTKTTCGS 78 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 IL ++ Y++TVT++L D+GA+++GK NMDEFAMGSS E S +GP +PW + Sbjct: 79 KILSNYKSVYDATVTKRLRDSGAILMGKTNMDEFAMGSSTEFSAFGPSKNPWDA-----N 133 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 PGGSSGGS+AAVA L ++G+DTGGSIRQPA+F G VG KP+YG SR G+++FA Sbjct: 134 RVPGGSSGGSAAAVAAGLVPFALGSDTGGSIRQPAAFCGVVGYKPSYGLVSRYGLVAFAS 193 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLDQ G ITR V D+ + K I G+D D+T + P+ ++E + + G+ +P E Sbjct: 194 SLDQIGPITRCVDDAVEVAKVIIGFDPDDSTTIEHPL-NFENEEPKDLTGLKFALPGEM- 251 Query: 274 LDY--LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 ++Y L ++ + + + + ++ AG + ++S+P +Y + YY+I+P EASSNL+RYDG Sbjct: 252 IEYPGLQESVKEVFIKMVESIEKAGGIVEKVSIPSLKYVVATYYLIAPGEASSNLSRYDG 311 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 +RYG R + E+ +R GFG EVK RI++GT+ LS+ YD++Y +A ++R LI + Sbjct: 312 IRYGQRKDADRYEEVVNQSRDFGFGDEVKRRILLGTFTLSAAYYDAYYRKALRVRKLISK 371 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 + E + D ++ PT+P A +G+ S + + D++T+ N+AGLPAIS+PA Sbjct: 372 EINEILSK-YDFVINPTSPIVAPKIGE---ISDPLTYYLMDIYTIPANLAGLPAISLPAG 427 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEK------EAGYFRPHKWW 493 E +P+G Q++ + F + + + +I+EK E G R + W Sbjct: 428 AYE-GLPVGFQMMARRFEDVRMLNTARILEKLSPSYDENGLARIAERW 474 >gi|224418977|ref|ZP_03656983.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter canadensis MIT 98-5491] gi|253827925|ref|ZP_04870810.1| glutamyl-tRNA amidotransferase subunit A [Helicobacter canadensis MIT 98-5491] gi|313142489|ref|ZP_07804682.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter canadensis MIT 98-5491] gi|253511331|gb|EES89990.1| glutamyl-tRNA amidotransferase subunit A [Helicobacter canadensis MIT 98-5491] gi|313131520|gb|EFR49137.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter canadensis MIT 98-5491] Length = 451 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 199/461 (43%), Positives = 273/461 (59%), Gaps = 37/461 (8%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL--EGIPIGIKDCF 82 EL + QAI+ SN +NAY+ GD +D E +PI IKD Sbjct: 19 ELKANLTQAIKQSN--LNAYV--------------------GDLQDYNEECLPIAIKDNI 56 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 KG S IL G+ Y +T + L + G+ NMDEFAMGS+ +S YG + Sbjct: 57 NVKGWEITCASKILQGYIAPYNATAIENLLQHKMAPFGRTNMDEFAMGSTTASSCYGKTL 116 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +P PGGSSGGS+AAVAG + A++G+DTGGSIRQPASF G VG+KPTYGR Sbjct: 117 NPKNPSK-----VPGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPASFCGCVGLKPTYGR 171 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 SR G+++++ SLDQ G IT+ + D AIL AI+GYD+ D+T NLP + L+ + + Sbjct: 172 VSRYGLVAYSSSLDQIGPITQNITDCAILFDAISGYDKMDSTSANLPFTNTYNNLNAN-R 230 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 M + I D I +Q+ I L G IVE + T Y + AYY+I AEA Sbjct: 231 KMRIAILPSLLKD-ADKNIQDAYQKSIDLLSANGHTIVEKEMLDTSYIIAAYYVICTAEA 289 Query: 323 SSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 SSNLAR+DGVRYG R E ++ E+Y TRS GFG EVK RI++G++VLSS YD++Y++ Sbjct: 290 SSNLARFDGVRYGNRAENINNLKELYLKTRSQGFGDEVKRRILLGSFVLSSGYYDAYYIK 349 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 A+K+RTLI R + E + D IL+P P +AF G +E + ++ D++T+ VN+A Sbjct: 350 AQKVRTLIARQYNEILKD-CDAILSPVAPRTAF--GFDECKTPLQMYL-EDIYTIGVNLA 405 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 GLPA+S+P E MP+G+QLIG F E+ L +G +E Sbjct: 406 GLPALSLPVGESE-GMPIGMQLIGAAFEEQKLLDLGLNLEN 445 >gi|55378142|ref|YP_135992.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Haloarcula marismortui ATCC 43049] gi|68052085|sp|Q5V2G6|GATA_HALMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|55230867|gb|AAV46286.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Haloarcula marismortui ATCC 43049] Length = 425 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 181/426 (42%), Positives = 257/426 (60%), Gaps = 14/426 (3%) Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +D+ I D L G + +KD +T+G+ T S +L+ + P Y++TV ++L D GA + Sbjct: 9 TDETIEGADDGPLAGKTVAVKDNISTEGVRTTCGSAMLEDYVPPYDATVVERLKDAGATI 68 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK NMDEF MG++ ETS +G V +P + + PGGSSGGS+A VA ++G+ Sbjct: 69 PGKTNMDEFGMGTTTETSAFGAVENP-----AAEGRVPGGSSGGSAAVVAAGDADLALGS 123 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIR PA+F G VGIKPTYG SR G+I++A SL+Q G I +V +A LL IAG Sbjct: 124 DTGGSIRCPAAFCGVVGIKPTYGLVSRYGLIAYANSLEQIGPIAPSVEGAAELLDVIAGP 183 Query: 239 DECDATCVNLPVPD--YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 DE DAT P D Y A D + G+++G+P E LD + +T+ + L+ G Sbjct: 184 DEHDATTQEAPEADGSYAAAADGDVDGLSIGVPTEL-LDGADEAVVETFWDAMDDLEAQG 242 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYENTRSIG 354 A E+ LP ++A+ AYY+I+ +EASSNLAR+DGVRYG + G D E + N R G Sbjct: 243 ASYHEVDLPSVEHAVEAYYVIAMSEASSNLARFDGVRYG-QSGGYDGNWNESFANAREQG 301 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG+EVK RI++GTY LS+ +D +Y +A+ R +K+DF EA + DV+ +PT P Sbjct: 302 FGEEVKRRILLGTYALSAGYHDKYYKKAQDARAWVKQDFDEALDD-ADVLASPTMPVP-- 358 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P+ + E+ + D T VN+A LPAISVPA + +P+GLQL+G F E + Sbjct: 359 PMKRGESLDDPLTMYLADANTTPVNLANLPAISVPAGETDDGLPVGLQLVGPAFGERQII 418 Query: 475 SVGQII 480 G + Sbjct: 419 RAGSAL 424 >gi|327400263|ref|YP_004341102.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Archaeoglobus veneficus SNP6] gi|327315771|gb|AEA46387.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Archaeoglobus veneficus SNP6] Length = 463 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 202/483 (41%), Positives = 289/483 (59%), Gaps = 27/483 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS ++++E + RL S+ A +LV ++ IE S + NAYI V A AEE D Sbjct: 1 MSGKGQISIAEWKQRLESE--KAYDLVAEMLERIEKS--KFNAYITVNGD-ALKLAEEYD 55 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K + G L GIPI +KD +TKG+ T S IL+ + P +++ V +++ GA+++G Sbjct: 56 KGKLEGK---LAGIPIAVKDNISTKGMRTTCASKILEDYVPVFDAHVVERIKQEGAIIIG 112 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMG++ ETSY+G V +P + GGSSGGS AA+A S+G+DT Sbjct: 113 KTNLDEFAMGTTTETSYFGVVRNP-----HDENRVAGGSSGGSGAAIAAGETVLSLGSDT 167 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PASF G VG+KPTYG SR G+I +A SLDQ G + V D A+LL+ I+G DE Sbjct: 168 GGSIRCPASFCGVVGLKPTYGLVSRYGLIPYANSLDQIGPMASCVEDLALLLEVISGKDE 227 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T P + +G+ E + + K +++ + +K G ++ Sbjct: 228 RDSTNAGKPF-----VFTPKFRKFRIGVISEMGGN---DDVMKCFEEAVEVIKGMGCEVG 279 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEV 359 E+S+P +YAL AYYII+ EASSNLARYDGVRYG + D Y R+ GFG EV Sbjct: 280 EVSMPSFKYALAAYYIIAMGEASSNLARYDGVRYGYALPQLDSWTRYFSKVRAEGFGSEV 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G+Y LS+ Y +YL+A K+RTL+K DF AF+ D++++PT P+ F +G E Sbjct: 340 KRRIMLGSYALSAGYYGKYYLKALKVRTLVKNDFQRAFKD-YDLLISPTMPSLPFRIG-E 397 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + +M + DV TV +N+AGLPA+S+P K +P+G+Q+IG F E + S Sbjct: 398 LADPLTMYKM--DVNTVPINLAGLPALSMPIGFV-KGLPVGMQVIGNYFEENAILSFALE 454 Query: 480 IEK 482 +EK Sbjct: 455 LEK 457 >gi|257457941|ref|ZP_05623100.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema vincentii ATCC 35580] gi|257444654|gb|EEV19738.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema vincentii ATCC 35580] Length = 486 Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 181/492 (36%), Positives = 279/492 (56%), Gaps = 21/492 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAE 57 M ++ +++E + L +++V+LV + QA E ++ ++ +IE A AE Sbjct: 1 MKDICTASLAELKTYLEEGAVTSVDLVRALKAAYQADEKQSTPLHGFIEFF-DDAEIQAE 59 Query: 58 ESDKRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 ++D G D L G+P +KD + +G CS IL+G++ Y +TV +L + G Sbjct: 60 KADALRKEGKVIDKPLLGLPFAVKDNISIRGKLCTCCSKILEGYKAPYNATVITRLIEAG 119 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 A+ +G+ NMDEFAMGSS E S YGP +P RS+ TPGGSSGGS+A VAGF Sbjct: 120 AIPIGRANMDEFAMGSSTEYSVYGPSRNPVDRSL------TPGGSSGGSAAVVAGFQAPF 173 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 ++GT+TGGS+R PAS+ G G+KPTYG SR G+++F SLDQ G+ R V D + L Sbjct: 174 ALGTETGGSVRLPASYCGIYGLKPTYGAISRYGVVAFGSSLDQVGLFARCVDDIGLGLSI 233 Query: 235 IAGYDECDATCVNL---PVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGIS 290 G D D T V P E ++ + + +P E+ + L + +++ + Sbjct: 234 AGGADSHDETSVRHDFSPCARLETYTGSELKKLRIALPVEFTQAKGLDADVAAIFEKFRT 293 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYEN 349 W G ++ +S+P + ++ YY+I+ +EASSNLAR+DG+RYGLR + GK E+Y Sbjct: 294 WFTSKGVQVDPVSIPVLESSIAMYYVIALSEASSNLARFDGIRYGLRKDPGKGYDELYCA 353 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TRS GFG+EVK RI+ G YVLS Y A ++R ++++ +Q D I PT Sbjct: 354 TRSAGFGREVKRRIITGNYVLSHHLSGDCYENALRVRARMEKEVGAILQQ-YDFIFCPTA 412 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 PT AF LG+ ++ M +D+FT VN++ +PA+S+PA + P+G+Q+ G Sbjct: 413 PTPAFKLGERVDD--PMAMYLSDLFTTFVNLSHIPALSIPAGKAKDGRPVGMQIAGAKLS 470 Query: 470 EETLFSVGQIIE 481 EE + + + +E Sbjct: 471 EEKILRLAKTLE 482 >gi|237798579|ref|ZP_04587040.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021432|gb|EGI01489.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. oryzae str. 1_6] Length = 327 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 154/315 (48%), Positives = 221/315 (70%), Gaps = 5/315 (1%) Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 AAVA L A+ GTDTGGSIRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT Sbjct: 1 AAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMART 60 Query: 225 VRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 D A+LL+ +AG+D D+T ++ PVPDY +L+ S++G+ +G+PKEY L P I + Sbjct: 61 AEDCALLLQGMAGFDPQDSTSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQL 120 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDI 343 + + L+ GA + E+SLP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ Sbjct: 121 VHESVKELEKLGAIVKEVSLPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDL 180 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 ++Y+ +R+ GFG EV+ RIM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDV Sbjct: 181 TDLYKRSRAEGFGPEVQRRIMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDV 239 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 IL PTTP A+ +G + ++ + D +T+ N+AGLP +S+PA + +P+G+QL Sbjct: 240 ILGPTTPNPAWKIGAKTHD--PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQL 296 Query: 464 IGQPFREETLFSVGQ 478 + F+E L +V Sbjct: 297 LAPYFQEGRLLNVAH 311 >gi|46198513|ref|YP_004180.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus thermophilus HB27] gi|81567776|sp|Q72L58|GATA_THET2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|46196135|gb|AAS80553.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus thermophilus HB27] Length = 471 Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 192/476 (40%), Positives = 293/476 (61%), Gaps = 20/476 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E R R+ ++S +E+ +Y++ ++ + + A++ + ++ AE D + Sbjct: 1 MLAHEIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLSL-NERLLEEAEAVDPGL--- 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+ + +KD AT+G+ T A S +L+ F P YE+T +L GA++LGK N+DE Sbjct: 57 ---PLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDE 113 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGSS E S + P +P+ D+ PGGSSGGS+AA+A L ++G+DTGGS+RQ Sbjct: 114 FGMGSSTEHSAFFPTKNPF----DPDR-VPGGSSGGSAAALAADLAPLALGSDTGGSVRQ 168 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G G+KPTYGR SR G+I++A SLDQ G + R+VRD A+L+ A+AG D DAT + Sbjct: 169 PAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAVAGPDPLDATSL 228 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +LP P ++ AL+ + + +G+ +E L SP +++ ++ + ++ G + E+S P Sbjct: 229 DLP-PRFQEALEGPLPPLRLGVVREA-LAGNSPGVERALEEALKVFRELGLSVREVSWPS 286 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 AL AYYI++PAEASSNLARYDG YG R EG+++ M E TR++ FG EVK R+++G Sbjct: 287 LPQALAAYYILAPAEASSNLARYDGTLYGRRAEGEEVEGMMEATRAL-FGLEVKRRVLVG 345 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T+VLSS Y+++Y RA+ R +K + F + VD++L PTTP AFP G + + Sbjct: 346 TFVLSSGYYEAYYGRAQAFRRRLKAEAQALFRE-VDLLLLPTTPHPAFPFGARRD---PL 401 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++TV N+ GLPA+S PA E +P+GLQL+ +E L E+ Sbjct: 402 AMYREDLYTVGANLTGLPALSFPAGF-EGHLPVGLQLLAPWGEDERLLRAALAFEE 456 >gi|325068293|ref|ZP_08126966.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Actinomyces oris K20] Length = 440 Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 183/429 (42%), Positives = 269/429 (62%), Gaps = 33/429 (7%) Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 +L G+P+ +KD T+G T A S IL+G+ P Y++T+ + L +LGK N+DEFAM Sbjct: 6 ELTGVPVAVKDLIVTRGQVTTAASRILEGWVPPYDATLVRNLRAARTPILGKTNLDEFAM 65 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S E S +G +PW PGGSSGGS+AAV + ++GTDTGGSIRQPA+ Sbjct: 66 GGSTEHSAFGRTANPWDL-----GRIPGGSSGGSAAAVGAYEAPVAVGTDTGGSIRQPAA 120 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 TGTVG+KPTYG SR G+I+ A SLD G + RTV D+A+L IA +D D+T Sbjct: 121 VTGTVGVKPTYGTVSRFGVIAMASSLDTPGPMARTVLDTALLHDVIASHDPLDSTS---- 176 Query: 250 VPDYERAL---------DQSIQGMTVGIPKEYRLD----YLSPTIDKTWQQGISWLKDAG 296 +PD R + + + G+ VG+ E LD Y + ++ + L+ AG Sbjct: 177 LPDAPRDMAAVVRAAQEGRDLTGLRVGVISE--LDGGEGYHDGVV-ASFHAALELLEAAG 233 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE---GKDILE-MYENTRS 352 A++ +SLPH +YAL AYY+I PAEASSNLARYDG+RYGLRVE G E + TR Sbjct: 234 AQVETVSLPHLEYALDAYYLIMPAEASSNLARYDGMRYGLRVEPTSGPVTAETVMAATRG 293 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GT+VLS+ YD++Y A+K+RTL++RDF A+++ D++++PT P + Sbjct: 294 AGFGDEVKRRIILGTHVLSAGYYDAYYGSAQKVRTLVQRDFAAAWDK-ADILVSPTAPVT 352 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A+ G++++ + DV T+ N+AG+P +S+P+ L + +P+G Q++ ++ Sbjct: 353 AYRFGEKDD---PLAMYKLDVTTIPANLAGVPGMSLPSGLSDDGLPVGFQILAPQRADDR 409 Query: 473 LFSVGQIIE 481 L+ VG ++E Sbjct: 410 LYRVGAVLE 418 >gi|307211485|gb|EFN87591.1| Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein [Harpegnathos saltator] Length = 520 Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 192/511 (37%), Positives = 281/511 (54%), Gaps = 24/511 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++ E R+ + E+ ++ ++ + + +NAYI V AR A ++D Sbjct: 1 MNKLLSTSIREVSQRIHGGTVRPSEICEASVK-LTSIVKPLNAYITVTDDVAREQASDAD 59 Query: 61 KRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R N L+GIP+ IKD + KG T S +L F P Y++TV ++L GA+++ Sbjct: 60 ARQQSNSLLGRLDGIPVAIKDNYCVKGKRTTCASRMLANFSPGYDATVYERLRKQGAILI 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPW------------------RSMDSTDKFT---PGG 158 GK N+DEFAMGS S YGP + W S ++ K T GG Sbjct: 120 GKTNLDEFAMGSGTIDSLYGPTRNLWGSEVLSRFYSYKSDASQVASEEAQGKDTWRIAGG 179 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSG S+ A+A C A++G+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 180 SSGASAVALATGTCYAALGSDTGGSTRNPASYCGLVGLKPTYGLVSRYGLIPLLNSMDVP 239 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 GI+ RTV D+A++L AIAG D D+T V + +++GIPKEY + +S Sbjct: 240 GILARTVDDAALILNAIAGPDPADSTTVQKEYQPIILPETIDLSNLSIGIPKEYGVRGIS 299 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 + W + L +AGA IV +SLPHT Y++ Y +++ + +SNLA YDG+ YG R Sbjct: 300 EEVQACWDEVSRHLAEAGANIVPVSLPHTDYSIVCYSVLNRCDVASNLACYDGIEYGHRA 359 Query: 339 -EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 E E+Y+ TRS GF VK RI++G Y L ++ Y+ +Y++A K+R LI +DF + Sbjct: 360 DEWTTAHELYKKTRSEGFNDVVKGRILVGNYFLLAKNYEEYYVKAMKMRRLIAQDFDVLW 419 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 + VD++LTPTT T A + + D T NMAGLPA++VP L + Sbjct: 420 DNNVDLLLTPTTLTEAPRYDHFVSLDNQTQCLIQDHCTQPANMAGLPAVNVPIKLSRAGL 479 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 PL LQL+ F E L +V + IE+ + R Sbjct: 480 PLSLQLMAPSFHEHRLLTVAKWIEQTVRFPR 510 >gi|222479267|ref|YP_002565504.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halorubrum lacusprofundi ATCC 49239] gi|222452169|gb|ACM56434.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halorubrum lacusprofundi ATCC 49239] Length = 434 Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 188/419 (44%), Positives = 257/419 (61%), Gaps = 18/419 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD +T+GI T S +L + P Y +TV +L D GA ++GK NMDEF MG Sbjct: 24 LAGATVAVKDNISTEGIRTTCGSEMLADYVPPYSATVVDRLTDAGATVVGKTNMDEFGMG 83 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ETS +GP +P + + PGGSSGGS+AAVA ++G+DTGGS+R PA+F Sbjct: 84 TTTETSAFGPTKNP-----ADPERVPGGSSGGSAAAVAAGEADVALGSDTGGSVRCPAAF 138 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL-- 248 G VGIKPTYG SR G++++A SL+Q G I TV ++A L IAG D D T +L Sbjct: 139 CGVVGIKPTYGLVSRYGLVAYANSLEQIGPIAGTVEEAAAALDVIAGADPHDGTTRDLSE 198 Query: 249 -----PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P P+Y A D + G+TVGIP E D + +T + I+ L+ GA+ EIS Sbjct: 199 VEGANPDPNYAAAADGDVDGLTVGIPTEL-FDGADERVVETVEAAIADLEAQGAETTEIS 257 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHR 362 LP ++A+ AYY+I+ AEASSNLAR+DGVRYG R E + E + TR GFG EVK R Sbjct: 258 LPSVEHAVQAYYVIAMAEASSNLARFDGVRYGNRAESDGNWNESFAETREEGFGAEVKRR 317 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I++GTY LS+ +D +Y +A+ R +++DF +AF VDVI +PT P F LG+ ++ Sbjct: 318 ILLGTYALSAGYHDKYYQKAQDARAWVRQDFEDAFAD-VDVIASPTMPVLPFELGESLDD 376 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 M D T VN+A LPAISVPA + +P+GLQL+G F EET+ +E Sbjct: 377 PLRM--YLADANTTPVNLANLPAISVPAGEAD-GLPVGLQLVGPKFDEETVIRAASAVE 432 >gi|307720716|ref|YP_003891856.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sulfurimonas autotrophica DSM 16294] gi|306978809|gb|ADN08844.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Sulfurimonas autotrophica DSM 16294] Length = 446 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/417 (44%), Positives = 262/417 (62%), Gaps = 16/417 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+PI IKD K + S IL G+ Y +TV KL + G G+ NMDEFAMGS Sbjct: 43 EGVPIAIKDNIQVKEWSVTSGSKILQGYIAPYNATVINKLLNAGLSPFGRTNMDEFAMGS 102 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S YG ++P + PGGSSGGS+AAV L A++G+DTGGSIRQPA++ Sbjct: 103 TTESSCYGKTLNPVNP-----ECVPGGSSGGSAAAVGAGLAIAALGSDTGGSIRQPAAYC 157 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL--P 249 G VG+KPTYGR SR G+ ++A SLDQ G +T+ V D+AIL I+G DE D+T + Sbjct: 158 GIVGMKPTYGRVSRYGLGAYASSLDQIGPMTQNVEDAAILYDIISGSDEKDSTNAMMDDK 217 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 V D LD S + +T+ + +Y ++ S I + + + I LK G I E + +Y Sbjct: 218 VSD---KLDPS-KKLTIAVLPKY-IENASDDIKEAYAKAIDALKAQGHTIAEHEMMDAKY 272 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + AYYI + AEA++NL RYDG+RYG RVEG ++ E Y NTRS GFG EVK RI++G +V Sbjct: 273 DISAYYITATAEATTNLGRYDGIRYGNRVEGANLEETYYNTRSEGFGDEVKRRILLGNFV 332 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LSS Y+++Y++A+K R LIK ++ + F+ VD+IL+P P+ A G+ N M Sbjct: 333 LSSGYYEAYYVKAQKTRHLIKDEYAKIFKD-VDLILSPVAPSVAPKFGELAN---PMEMY 388 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T++VN+AGLPA+S+P MP+GLQLI + E+TLF +EKE Y Sbjct: 389 LSDIYTISVNLAGLPALSLPIMKNSDGMPIGLQLIANAYDEQTLFDGSLSLEKEIAY 445 >gi|288931333|ref|YP_003435393.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Ferroglobus placidus DSM 10642] gi|288893581|gb|ADC65118.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ferroglobus placidus DSM 10642] Length = 459 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 199/480 (41%), Positives = 300/480 (62%), Gaps = 27/480 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++V+E ++R+ S+ A+ V+ ++ ++ + + N++I V + A + AEE +K + G Sbjct: 2 ISVAEWKERVESE--GALNCVEKLMKEVKKN--RYNSFITVTEEIALSQAEEYEKGKLKG 57 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ IKD +T GI T S +L + P +++ V ++L + GA+++GK NMDE Sbjct: 58 K---LAGIPVAIKDNISTAGIRTTCASKMLHDYVPPFDAHVVERLKEEGAIIVGKTNMDE 114 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMG++ ETSY+G V +P + GGSSGGS++++AG S+G+DTGGSIR Sbjct: 115 FAMGTTTETSYFGVVRNP-----RDESRVAGGSSGGSASSIAGGETVLSLGSDTGGSIRC 169 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASFTG G+KPTYG SR G+I +A SL+Q G + ++ D A+LL+ IAG D+ D+T Sbjct: 170 PASFTGVYGLKPTYGLVSRYGLIPYANSLEQIGPMAASLDDLALLLEVIAGRDQRDSTNA 229 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 E + + VGI KE + + + +++ + LK AK+ EISLP Sbjct: 230 G-----REFRFEFVEKDFKVGIVKEMKAN---EKVMAAFEEFVEKLKKV-AKVKEISLPS 280 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 YALPAYY+I+ +EASSNLARYDGVRYG +E D + + R+ GFG+EVK RIM+ Sbjct: 281 LNYALPAYYVIAMSEASSNLARYDGVRYGYTLEKLDSWRKFFAKVRAEGFGEEVKRRIMM 340 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G++ LS+ Y +YL+A K+RTL+ DF AFE D++++PT P AF +G+ ++ Sbjct: 341 GSFALSTGYYGKYYLKALKVRTLVINDFKRAFES-FDILISPTMPDVAFKIGEIKD---P 396 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + Y DV TV N+AG+PA+SVP L +P+G+QL+G F E L S G+I+E+ G Sbjct: 397 VTMYYADVNTVPANLAGIPALSVP-LLEVDGLPVGVQLMGNHFSESALISFGKIVEERVG 455 >gi|283956456|ref|ZP_06373936.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283792176|gb|EFC30965.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 1336] gi|307747962|gb|ADN91232.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter jejuni subsp. jejuni M1] Length = 453 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/415 (45%), Positives = 265/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++++ + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEELNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|15611836|ref|NP_223487.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori J99] gi|7674048|sp|Q9ZL13|GATA_HELPJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|4155334|gb|AAD06348.1| GLU-TRNA AMIDOTRANSFERASE, SUBUNIT A [Helicobacter pylori J99] Length = 453 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 188/455 (41%), Positives = 275/455 (60%), Gaps = 16/455 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++ + L NG G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASAIENLHQNGMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNIVPGGSSGGSAAAVAGGLTVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGVIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL-PVPDYERALDQSIQGMTVGIPK 270 S DQ IT+ V D++IL AI+GYD D+T NL P + + + + I + Sbjct: 181 RSSFDQIRPITQNVEDASILFDAISGYDSKDSTSANLKPTHTFINLIRD--KRFKIAILR 238 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 ++ D S + ++ I LK+ G ++VE + + Y + YYIIS AEASSNLAR+D Sbjct: 239 DHIND-ASNEVQLAYENTIKALKEMGHEVVEKKMLDSHYQISIYYIISMAEASSNLARFD 297 Query: 331 GVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 GVRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +I Sbjct: 298 GVRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMI 357 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISV 448 K + + FE+ VD+I TP PT+A+ N S +Y +D++T+ N++GLPA+S+ Sbjct: 358 KEQYNKIFEE-VDLIFTPVAPTTAYLF----NYHASPLEMYLSDIYTIGANLSGLPALSL 412 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 P A +P+G+Q I + F E++L V +E+E Sbjct: 413 PVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|195158877|ref|XP_002020311.1| GL13915 [Drosophila persimilis] gi|194117080|gb|EDW39123.1| GL13915 [Drosophila persimilis] Length = 507 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 186/471 (39%), Positives = 281/471 (59%), Gaps = 20/471 (4%) Query: 32 QAIENSNS--QMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATKGIH 88 QA+E+S + +NA++ + ++AR A++S++R + L+G+ I IKD F T+ +H Sbjct: 29 QALEDSVNLKTLNAFVRLTPEEARQQAQQSEQRYQKKQPSSGLDGVTIAIKDNFCTENVH 88 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-RS 147 T S +L F P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W Sbjct: 89 TTCASRMLQDFVPPYDATVCSRLRQAGAVLLGKTNMDQFAMGAGTVDSIYGPTKNIWSED 148 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + + GGSSGGS++AVA LC A IG+DTGGS R PAS+ G VG+KPTYG SR G Sbjct: 149 LTQNNWRIAGGSSGGSASAVAAGLCFAGIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHG 208 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQ 262 +I S+D GI+ R+V D +L A+AG D D+T + P +P+ + LD +Q Sbjct: 209 LIPLVNSMDVPGILARSVSDCVEVLNAVAGPDGKDSTTIRQPFTKLQLPEVD-GLD--LQ 265 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 + +GIPKEY + LS + +TW + L+ AGA + ++SLP+T ++ Y I++ E Sbjct: 266 TVRIGIPKEYHCNGLSAEVLETWTKVADLLECAGASVQQVSLPNTAASIFVYSILNQCEV 325 Query: 323 SSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 +SN+ARYDG+ +G R + + ++Y +R+ GF VK RI+ G ++L + YD ++ + Sbjct: 326 ASNMARYDGIEFGHRAADERSTEQLYAQSRAEGFNDVVKTRILTGNFLLLRKNYDHYFEK 385 Query: 382 ARKIRTLIKRDFTEAFEQG-----VDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFT 435 A ++R LI DF + FE VD++LTPTT T A PL K+ ++ + D T Sbjct: 386 ALRVRRLIAEDFLKVFEASSKEDRVDILLTPTTLTEA-PLYKDFSSLSNRDQCAVQDFCT 444 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 NMAG+PA+S+P L +PL LQL+ + E+ L SV IE + + Sbjct: 445 QPANMAGIPAVSIPIRLSRSGLPLSLQLMSRSLNEQLLLSVASWIEAQVAF 495 >gi|154149337|ref|YP_001406469.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter hominis ATCC BAA-381] gi|166217657|sp|A7I1S8|GATA_CAMHC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|153805346|gb|ABS52353.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Campylobacter hominis ATCC BAA-381] Length = 452 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 179/411 (43%), Positives = 263/411 (63%), Gaps = 13/411 (3%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPI IKD K + S+IL G+ Y++TV KL G G+ NMDEFAMGS+ Sbjct: 50 GIPIAIKDNIQVKNWSVTSASNILQGYVAPYDATVITKLRSAGFAPFGRTNMDEFAMGST 109 Query: 133 NETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 E+S+YG ++P TD PGGSSGGS+AAVA + A++G+DTGGSIRQPA+F Sbjct: 110 TESSFYGKTLNP------TDYSRVPGGSSGGSAAAVAAGIAVAALGSDTGGSIRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KPTYGR SR G+ +++ SLDQ G IT+ V D+AIL IAGYD+ D+T + Sbjct: 164 GCVGFKPTYGRVSRYGLAAYSSSLDQIGPITQNVTDAAILFDVIAGYDKMDSTSYSKEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ S + +T+ + + + ++ + + I LK AG KI+ +L +++Y + Sbjct: 224 STADKLN-SDRKLTIAVIENF-VNETKDEVKSALLKTIEKLKSAGHKIIYKNLLNSKYNI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII+ AEAS+NL+RYDGVRYG R + ++ E+Y NTRS GFG+EV+ R+++GT+VLS Sbjct: 282 AAYYIIATAEASTNLSRYDGVRYGNRAKASNLNELYANTRSAGFGEEVQRRMLLGTFVLS 341 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++Y++A+K R IK+++ + ++ D+I P P+ A+ G+ N + + Sbjct: 342 SGYYDAYYIKAQKARAYIKKEYEKILDEA-DLIFMPIAPSVAYKFGELAN---PLDAYLS 397 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DV+T+ VN+AGLPAISVP A + + + QLIG+ + E+T+ +EK Sbjct: 398 DVYTIGVNLAGLPAISVPIAKNSENLNISAQLIGRAYDEQTVLDGALNLEK 448 >gi|157415320|ref|YP_001482576.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni 81116] gi|172047140|sp|A8FMB2|GATA_CAMJ8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|157386284|gb|ABV52599.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 81116] Length = 453 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 187/415 (45%), Positives = 265/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNVN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++++ + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEELNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|163784086|ref|ZP_02179036.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159880647|gb|EDP74201.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 354 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 162/342 (47%), Positives = 227/342 (66%), Gaps = 7/342 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V E L K++ E+++S+I+ E ++N+Y+ ++ A A++ D+ + D Sbjct: 7 SVKELSKLLSKKEVKPSEIIESFIKRKEEFEPKINSYVSDLSDLALEDAKKKDEELARLD 66 Query: 68 -ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPI IKD +TKGI T S IL+ + P + +TV +KL ++G ++ GK N+DE Sbjct: 67 NIPALFGIPIAIKDNISTKGIKTTCSSKILENYVPPFNATVVEKLNEHGYIITGKTNLDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS E S + +PW + PGGSSGGS+A V + AS+G+DTGGSIRQ Sbjct: 127 FAMGSSTENSAFFITKNPWDL-----ERVPGGSSGGSAACVGAGIVPASLGSDTGGSIRQ 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG+KPTYGR SR G+++FA SLDQ G ITRTV DSAI+L IAG DE D+T Sbjct: 182 PAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDSAIILNVIAGKDERDSTSR 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 N+PVPD+ +A+ + I+G+ +GIPKE+ + L + + L+ GA+IVEISLP Sbjct: 242 NIPVPDFTKAIGKDIKGIKIGIPKEFFSEGLDQQVKEAVLSAAKQLEKEGAEIVEISLPT 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMY 347 +YA+ AYYII+P+EASSNLAR+DGVRYG R + KD+ +MY Sbjct: 302 AKYAIEAYYIIAPSEASSNLARFDGVRYGYRAKDYKDLDDMY 343 >gi|198449928|ref|XP_001357779.2| GA19290 [Drosophila pseudoobscura pseudoobscura] gi|198130818|gb|EAL26914.2| GA19290 [Drosophila pseudoobscura pseudoobscura] Length = 507 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 186/471 (39%), Positives = 282/471 (59%), Gaps = 20/471 (4%) Query: 32 QAIENSNS--QMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATKGIH 88 QA+E+S + +NA++ + ++AR A++S++R + L+G+ I IKD F T+ +H Sbjct: 29 QALEDSVNLKTLNAFVRLTPEEARQQAQQSEQRYQKKQPSSGLDGVTIAIKDNFCTENVH 88 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-RS 147 T S +L F P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W Sbjct: 89 TTCASRMLQDFVPPYDATVCSRLRQAGAVLLGKTNMDQFAMGAGTVDSIYGPTKNIWSED 148 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + + GGSSGGS++AVA LC A IG+DTGGS R PAS+ G VG+KPTYG SR G Sbjct: 149 LTQNNWRIAGGSSGGSASAVAAGLCFAGIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHG 208 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQ 262 +I S+D GI+ R+V D +L A+AG D D+T + P +P+ + LD +Q Sbjct: 209 LIPLVNSMDVPGILARSVSDCVEVLNAVAGPDGKDSTTIRQPFTKLQLPEVD-GLD--LQ 265 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 + +GIPKEY + LS + +TW + L+ AGA + ++SLP+T ++ Y I++ E Sbjct: 266 TVRIGIPKEYHCNGLSAEVLETWTKVADLLECAGASVQQVSLPNTAASIFVYSILNQCEV 325 Query: 323 SSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 +SN+ARYDG+ +G R + + ++Y +R+ GF VK RI+ G ++L + YD ++ + Sbjct: 326 ASNMARYDGIEFGHRAADERSTEQLYAQSRAEGFNDVVKTRILTGNFLLLRKNYDHYFEK 385 Query: 382 ARKIRTLIKRDFTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFT 435 A ++R LI DF + F E VD++LTPTT T A PL K+ ++ + D T Sbjct: 386 ALRVRRLIAEDFLKVFEAPSKEDRVDILLTPTTLTEA-PLYKDFSSLSNRDQCAVQDFCT 444 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 NMAG+PA+S+P L +PL LQL+ + E+ L SV + IE + + Sbjct: 445 QPANMAGIPAVSIPIRLSRSGLPLSLQLMSRSLNEQLLLSVARWIEAQVAF 495 >gi|299144356|ref|ZP_07037436.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518841|gb|EFI42580.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 482 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 188/488 (38%), Positives = 281/488 (57%), Gaps = 18/488 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E D +++D S E+ Y+ IE + +NAY+ V + A A+E D++ Sbjct: 2 KLTKLKAHELIDGYKNRDFSCEEVTREYLSVIEREEADLNAYVTVCDESAIKEAKEVDRK 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +N + L G+PIG+KD A K I S +L+ F Y+S +++++ NG V++GK Sbjct: 62 FMNREEVGILSGVPIGVKDNIAVKNILMTCSSKMLENFIVPYDSVISERIKSNGGVIIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMG+S +TSYYG +P +D T GGSSGGS++A+AG CA ++GTDTG Sbjct: 122 TNMDEFAMGASTKTSYYGVSKNP---LDRT--LVSGGSSGGSASALAGEECALAVGTDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS RQPASF G VGIKPTYG R G+ + A + DQ G + V D+ +LLKA+ G DE Sbjct: 177 GSTRQPASFCGLVGIKPTYGSIPRYGVATMANTFDQPGAFGKDVEDAVLLLKALEGRDER 236 Query: 242 DATCVNLPVPDYE---RALDQSI---QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DAT V P E + D+ I + M + IP Y L+ + + + I+ K+A Sbjct: 237 DATSVGNPSIREEFNFKNTDEVISYLKNMKIAIPSLYMNMKLNDRVKADFDKAINVFKNA 296 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIG 354 GA I + + +Y + Y+I+ E + N+AR+DG+RYG R E D EMY +R+ G Sbjct: 297 GAIIDIVDMSSLKYVIETYHILVNGEIAPNMARFDGLRYGHRTENYDTFEEMYRKSRAEG 356 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RIMIGT++LS + +Y +A K+RTLIK +F E F+ ++++ PT P F Sbjct: 357 FGDEVKRRIMIGTHILSLDLAEDYYYKALKVRTLIKNEFDEVFKSH-NLVMCPTVPVLPF 415 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 K E+N + D+FT+ NM G P+IS+P + + +G++L F++ + Sbjct: 416 ---KIEDNMSPVEMYQADLFTIPANMTGCPSISIPMPKID-GLSVGIELTANRFKDNEMI 471 Query: 475 SVGQIIEK 482 E+ Sbjct: 472 KAALGFER 479 >gi|45657336|ref|YP_001422.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59797804|sp|Q72SC3|GATA_LEPIC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|45600574|gb|AAS70059.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 487 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 187/483 (38%), Positives = 291/483 (60%), Gaps = 20/483 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ E +D L S IS+ ELV + I I + + A++ + +K +AEESD Sbjct: 1 MNEILKKPYVELKDSLNSGKISSTELVSACINRIREVDGAVKAFLYLDEKKVLNSAEESD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR G + +G+P+ IKD + T S IL+ ++ + +TV +KL + G ++ Sbjct: 61 KRRKEGKPLSEFDGMPVAIKDNICIRDTITSCSSKILENYKSPFHATVVEKLLEKGFILF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + NMDEFAMGSS E S + +P+ + PGGSSGGS+AAVA + ++G+D Sbjct: 121 PRTNMDEFAMGSSTENSAFQTTRNPFDL-----ERIPGGSSGGSAAAVAASMVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPAS G G+KPTYG SR G++++A SLDQ G +R ++ L I+G D Sbjct: 176 TGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSRELQGCIDLYSVISGKD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID----KTWQQGISWLKDA 295 D+T ++ P Q +G+ VG+ K ++P I K++ + ++ LK+ Sbjct: 236 VRDSTSIHRPKFSASDVQPQDFKGLKVGVIK------MTPEIQSEVVKSYDKVLNQLKEK 289 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIG 354 GA +V+I +A+P YYII+ AE SSNL+R+DG+R+G R + LE ++ ++R+ G Sbjct: 290 GATLVDIDFSKFGFAIPIYYIIATAECSSNLSRFDGIRFGSRKDKTGKLEDLFVDSRTEG 349 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GT+ LS+ YD++Y A+K R LI++++ E+F VD IL PT+PT+AF Sbjct: 350 FGPEVKRRILLGTFSLSAGYYDAYYGTAQKARALIRKEY-ESFFSKVDCILQPTSPTTAF 408 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 +G++ + M D++T +VN+AGLPA+SVP +K +P+GLQ+ F+E LF Sbjct: 409 KIGEKTKDPIQMYKA--DIWTTSVNLAGLPAMSVPMGADQKGLPIGLQITTPHFQEGKLF 466 Query: 475 SVG 477 + Sbjct: 467 GIA 469 >gi|24215207|ref|NP_712688.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Leptospira interrogans serovar Lai str. 56601] gi|39931570|sp|Q8F3A1|GATA_LEPIN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|24196287|gb|AAN49706.1| amidase [Leptospira interrogans serovar Lai str. 56601] Length = 487 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 186/483 (38%), Positives = 292/483 (60%), Gaps = 20/483 (4%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + E +D L S IS+ ELV + I I + + A++ + +K +AEESD Sbjct: 1 MNEILKKSYVELKDSLNSGKISSTELVSACINRIREVDGAVKAFLYLDEKKVLNSAEESD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR G + +G+P+ IKD + T S IL+ ++ + +TV +KL + G ++ Sbjct: 61 KRRKEGKPLSEFDGMPVAIKDNICIRDTITSCSSKILENYKSPFHATVVEKLLEKGFILF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + NMDEFAMGSS E S + +P+ + PGGSSGGS+AAVA + ++G+D Sbjct: 121 PRTNMDEFAMGSSTENSAFQTTRNPFDL-----ERIPGGSSGGSAAAVAASMVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPAS G G+KPTYG SR G++++A SLDQ G +R ++ L I+G D Sbjct: 176 TGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSRELQGCIDLYSVISGKD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID----KTWQQGISWLKDA 295 D+T ++ P Q +G+ VG+ K ++P I K++ + ++ LK+ Sbjct: 236 VRDSTSIHRPKFSASDVQPQDFKGLKVGVIK------MTPEIQSEVVKSYDKVLNQLKEK 289 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIG 354 GA +V++ +A+P YYII+ AE SSNL+R+DG+R+G R + LE ++ ++R+ G Sbjct: 290 GATLVDLDFSKFGFAIPIYYIIATAECSSNLSRFDGIRFGSRKDKTGKLEDLFVDSRTEG 349 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GT+ LS+ YD++Y A+K R LI++++ E+F VD IL PT+PT+AF Sbjct: 350 FGPEVKRRILLGTFSLSAGYYDAYYGTAQKARALIRKEY-ESFFSKVDCILQPTSPTTAF 408 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 +G++ + M D++T +VN+AGLPA+SVP +K +P+GLQ+ F+E LF Sbjct: 409 KIGEKTKDPIQMYKA--DIWTTSVNLAGLPAMSVPMGADQKGLPIGLQITTPHFQEGKLF 466 Query: 475 SVG 477 + Sbjct: 467 GIA 469 >gi|86150436|ref|ZP_01068661.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839031|gb|EAQ56295.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni CF93-6] Length = 453 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 187/415 (45%), Positives = 264/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASTNLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|86152462|ref|ZP_01070667.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596142|ref|ZP_01099379.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|85843347|gb|EAQ60557.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190983|gb|EAQ94955.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|315927933|gb|EFV07255.1| glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928758|gb|EFV08033.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter jejuni subsp. jejuni 305] Length = 453 Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 187/415 (45%), Positives = 264/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|195497826|ref|XP_002096265.1| GE25156 [Drosophila yakuba] gi|194182366|gb|EDW95977.1| GE25156 [Drosophila yakuba] Length = 508 Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 183/460 (39%), Positives = 271/460 (58%), Gaps = 18/460 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + ++A A+ES++R + DL+G+ I IKD F TK +HT S +L+ F Sbjct: 40 LNAFVRLTPEQAAQQAQESEERYKLRQPNSDLDGVTIAIKDNFCTKDVHTTCASRMLEDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W +D GG Sbjct: 100 LPPYDATVCSRLKQAGAVVLGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLDKDHWRIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYR 273 GI R+V D +L +AG D+ D+T + P +P+ R +D S + +GIPKEY Sbjct: 220 GIFARSVSDCVAVLNTVAGQDQLDSTTIRKPFTRLNLPEV-RQIDLST--VRIGIPKEYH 276 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LS + +TW + L+ GA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 277 CHGLSAEVLETWCKVADLLECGGASVRQVSLPNTAASIFVYSILNQCEVASNMARYDGIE 336 Query: 334 YGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R + + ++Y +R+ GF + VK RI+ G ++L + YD H+ +A ++R LI D Sbjct: 337 YGHRASDERSTEQLYALSRAEGFNEVVKTRILTGNFLLLKKNYDQHFEKALRVRRLIAED 396 Query: 393 FTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAI 446 F + F E VD++LTPTT T A PL K+ + + D T NMAG+PA+ Sbjct: 397 FAKVFDSSVQEDRVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPANMAGIPAV 455 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +P L +PL LQL+ E+ L +V + IE + + Sbjct: 456 CIPIRLSRAGLPLSLQLMSNSLNEQLLLTVARWIEAQVNF 495 >gi|313126972|ref|YP_004037242.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Halogeometricum borinquense DSM 11551] gi|312293337|gb|ADQ67797.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Halogeometricum borinquense DSM 11551] Length = 430 Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 195/434 (44%), Positives = 264/434 (60%), Gaps = 21/434 (4%) Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +++ I D L G + +KD +T G+ T S +LD + P Y++TV + L D GA + Sbjct: 8 TEETIDGADDGPLAGKTVAVKDNLSTDGLRTTCGSAMLDEYVPPYDATVVEHLKDAGATI 67 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK NMDEF MG + ETS +GP +P ++ PGGSSGGS+AAVA ++GT Sbjct: 68 VGKTNMDEFGMGGTTETSAFGPTKNPVD-----EERVPGGSSGGSAAAVAAGKADLALGT 122 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA+F G VGIKPTYG SR G+I++A SL+Q G I TV ++A LL IAG Sbjct: 123 DTGGSVRNPAAFCGVVGIKPTYGLVSRYGLIAYANSLEQVGPIGSTVEETAALLDVIAGA 182 Query: 239 DECDAT--------CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 DE DAT DY A D + GMTVG+ + LD + +T++ +S Sbjct: 183 DEHDATTRFDQTMDAHPAENSDYAAAADGDVDGMTVGVITDL-LDGADDRVVETFEAAVS 241 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYE 348 L+ GA +VE+SL ++A+ AYY+I+ +EASSNLARYDGVRYGL GK+ ++Y Sbjct: 242 DLESQGAAVVEVSLDSLEHAVQAYYVIAMSEASSNLARYDGVRYGLST-GKEGNWNDVYA 300 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 +TR GFG EVK RI++GTY LS+ +D +Y +A+ R IK+DF EA + DV+ TPT Sbjct: 301 DTREEGFGAEVKRRILLGTYALSAGYHDKYYKKAQDARAWIKQDFDEALAE-ADVLATPT 359 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P LG E+ S + D TV VN+A LPAISVPA + +P+GLQLIG F Sbjct: 360 MPVLPPKLG--ESLSDPLQLYLMDANTVPVNLANLPAISVPAGEAD-GLPVGLQLIGPKF 416 Query: 469 REETLFSVGQIIEK 482 EET+ +E Sbjct: 417 GEETMIRAASAVEN 430 >gi|307190710|gb|EFN74629.1| Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein [Camponotus floridanus] Length = 519 Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 188/474 (39%), Positives = 262/474 (55%), Gaps = 29/474 (6%) Query: 41 MNAYIEVVAQKARAAAEESDKRII-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NAYI V A A ++D R N L+GIPI IKD + K I T S +L F Sbjct: 40 LNAYITVTNDIASEQANDADARQQRNSLLGPLDGIPIAIKDNYCVKDIPTTCASRMLTNF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-------------- 145 P Y +T+ ++L G V++GK N+DEFAMGS S YGP + W Sbjct: 100 SPGYNATIYERLRMQGTVLIGKTNLDEFAMGSGTVDSLYGPTKNLWGSEVLSQFYSYELD 159 Query: 146 ------RSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 R + D + GGSSGGS+ AVA C A++G+DTGGS R PAS+ G VG+KP Sbjct: 160 SSVITERKLCEKDAWRIAGGSSGGSAVAVATGTCYAALGSDTGGSTRNPASYCGLVGLKP 219 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYER 255 TYG SR G+I S+D GI+TR V D ++L AIAG D D T V +P+ + Sbjct: 220 TYGLVSRYGLIPLLNSMDMPGILTRIVDDIVLILNAIAGPDSADPTTVQKEYVPI-NLPN 278 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 +D + + +GIPKEY + +S + W + L++AGA IV +SLPHT Y++ Y Sbjct: 279 TID--VSNLRIGIPKEYGVQGISKEMQACWNEVSHHLEEAGASIVPVSLPHTNYSIVCYS 336 Query: 316 IISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +++ + +SNLA YDG+ YG R E E+Y+ TRS GF VK RI++G Y L + Sbjct: 337 VLNRCDVASNLACYDGIEYGHRADEWSSAYELYKKTRSEGFNDVVKGRILVGNYFLLAEN 396 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 Y +Y++A K+R LI +DF + +D++LTPTT T A + + D Sbjct: 397 YKEYYVKAMKMRRLITQDFDVLWNNNIDLLLTPTTLTEAPSYDEFIKLDNQTQCLIQDHC 456 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T NMAGLPAI+VP L + +PL LQL+ F E+ L +V + IE+ + R Sbjct: 457 TQPANMAGLPAINVPIKLSRRGLPLSLQLMAPLFHEQRLLTVAKWIEQAVQFPR 510 >gi|194745218|ref|XP_001955085.1| GF16420 [Drosophila ananassae] gi|190628122|gb|EDV43646.1| GF16420 [Drosophila ananassae] Length = 508 Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 185/461 (40%), Positives = 275/461 (59%), Gaps = 20/461 (4%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + +KA AAE+S KR N + L+G+ I IKD F T+GI T S +L F Sbjct: 40 LNAFVRLTPEKALQAAEDSLKRYQNKKPKGTLDGVTIAIKDNFCTEGIPTTCASKMLQDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W D++ GG Sbjct: 100 VPPYDATVCSRLKKAGAVLLGKTNMDQFAMGAGTVDSLYGPTKNIWSEELDGDRWRIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA +C A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGICYAAIGSDTGGSTRNPASYCGVVGLKPTYGLLSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCV-----NLPVPDYERALDQ-SIQGMTVGIPKEY 272 GI R++ D +L +AG D D+T + NL +P+ +DQ ++ + +GIPKEY Sbjct: 220 GIFARSISDCVDVLNTVAGPDTFDSTTIRKPYKNLTLPE----IDQINLSTVRIGIPKEY 275 Query: 273 RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 + LSP + +TW + L+ AGA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 276 HCEGLSPEVLETWSKVADLLECAGASVRQVSLPNTAASIFVYSILNQCEVASNMARYDGI 335 Query: 333 RYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 YG R + + ++Y +R+ GF + VK RI+ G + L + YD ++ +A ++R LI Sbjct: 336 EYGHRASDERSTEQLYAQSRAEGFNEVVKTRILTGNFFLLRKNYDHYFEKALRVRRLIAE 395 Query: 392 DFTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPA 445 DF + F + VD++LTPTT T A PL K+ + D T NMAG+PA Sbjct: 396 DFLKVFVASQEDDRVDILLTPTTLTDA-PLYKDFAGLTNRDQCAVQDFCTQPANMAGIPA 454 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +S+P L + +PL LQL+ E+ L +V + IE + + Sbjct: 455 VSIPIRLSQSGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|116328527|ref|YP_798247.1| amidase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331255|ref|YP_800973.1| amidase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280999|sp|Q04SA5|GATA_LEPBJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|122283685|sp|Q050D1|GATA_LEPBL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116121271|gb|ABJ79314.1| Amidase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124944|gb|ABJ76215.1| Amidase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 485 Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 187/488 (38%), Positives = 294/488 (60%), Gaps = 26/488 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + +E + L ISA EL + I+ I+ + + A++ + ++ AA ESD Sbjct: 1 MNEILRKSYAELKSSLSLGKISATELATACIERIKEVDGSVKAFLSLDEKRILDAASESD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R +G+ + +G+PI IKD + T S IL+ ++ + +TV +KL G V++ Sbjct: 61 ARRKSGNPLSEFDGMPIAIKDNICIRDSITSCASKILENYKSPFHATVIEKLIAKGFVLI 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + NMDEFAMGSS E S + +P+ + PGGSSGGS+AAVA + ++G+D Sbjct: 121 PRANMDEFAMGSSTENSAFQTTRNPFDL-----ERIPGGSSGGSAAAVAASMVPLALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+RQPAS G G+KPTYG SR G++++A SLDQ G ++ ++ L I+G D Sbjct: 176 TGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSKELQGCIDLYSVISGKD 235 Query: 240 ECDATCVNLP------VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 E D+T +N P PD+ +G+ +G K + P + K +++ ++ LK Sbjct: 236 ERDSTSLNHPGFSAPWTPDF--------KGLKIGTIK--MTSEIQPEVVKAYEKVLNQLK 285 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRS 352 + GA +VE+ +A+P YYII+ AE SSNL+R+DG+R+G R + LE ++ ++R+ Sbjct: 286 EKGATLVELDFSKFDFAIPIYYIIATAECSSNLSRFDGIRFGSRKDKTGKLEDLFVDSRT 345 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GT+ LS+ YD++Y A+K R LI++++ ++F VD IL PT+PT+ Sbjct: 346 TGFGSEVKRRILLGTFSLSAGYYDAYYGTAQKARVLIRKEY-DSFFSKVDFILQPTSPTT 404 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AF +G++ + M D++T +VN+AG+PAISVP EK +P+GLQ+ F+E Sbjct: 405 AFKVGEKTKDPIQMYK--ADIWTTSVNLAGIPAISVPMGTDEKGLPIGLQITAPHFQEGK 462 Query: 473 LFSVGQII 480 LF Q I Sbjct: 463 LFGAAQAI 470 >gi|194900060|ref|XP_001979575.1| GG16219 [Drosophila erecta] gi|190651278|gb|EDV48533.1| GG16219 [Drosophila erecta] Length = 508 Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 181/460 (39%), Positives = 271/460 (58%), Gaps = 18/460 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + ++A A+ES++R G D++G+ I IKD F TK +HT S +L F Sbjct: 40 LNAFVRLTPEQAAKQAQESEQRYKQGQPTSDIDGVTIAIKDNFCTKDVHTTCASRMLQDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W D++ GG Sbjct: 100 VPPYDATVCSRLKQAGAVVLGKTNMDQFAMGAGTVDSLYGPTKNIWSEDFDKDRWRIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYR 273 GI R+V D +L +AG D+ D+T + P +P+ + + + +GIPKEY Sbjct: 220 GIFARSVSDCVAVLNTVAGQDQLDSTTIRKPFTRLNLPEVGQI---DLSTVRIGIPKEYH 276 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LS + +TW + L+ +GA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 277 CHGLSAEVLETWSKVADLLECSGASVRQVSLPNTASSIFVYSILNQCEVASNMARYDGIE 336 Query: 334 YGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R + E +Y +R+ GF + VK RI+ G ++L + YD ++ +A ++R LI D Sbjct: 337 YGHRASNERSTEQLYALSRAEGFNEVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAED 396 Query: 393 FTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAI 446 F + F E+ VD++LTPTT T A PL K+ + + D T NMAG+PA+ Sbjct: 397 FAKVFDSSAQEERVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPANMAGIPAV 455 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 S+P L +PL LQL+ E+ L +V + IE + + Sbjct: 456 SIPIRLSRAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|328956018|ref|YP_004373351.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coriobacterium glomerans PW2] gi|328456342|gb|AEB07536.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Coriobacterium glomerans PW2] Length = 504 Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 190/470 (40%), Positives = 277/470 (58%), Gaps = 18/470 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 + SA E+ + + AIE +S++ A+++V + A AA+ D+ +GD L G+P+ I Sbjct: 20 EFSAREIACASLDAIERRDSEIGAFLQVTPELAIEAADRLDRARASGDKLPALAGVPLAI 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G T S +L+ + + +T ++ D G + +GK NMDEFA GSS E+S + Sbjct: 80 KDNMNLLGTRTTCASRMLESYESPFTATCVARMLDAGCLPMGKANMDEFAFGSSTESSAF 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 +PW + PGGSSGGS+AAVA S+G+DTGGS RQPAS G VG+KP Sbjct: 140 HRTNNPWDTAR-----VPGGSSGGSAAAVAAGEVVLSLGSDTGGSTRQPASLCGVVGMKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI--AGYDECDATCVNLPVPDYERA 256 TYG SR G+++F SLDQ G I RTV D A + A+ G D DA ++P D+ Sbjct: 195 TYGAVSRYGVVAFGSSLDQVGPIGRTVEDVACAMDALTSGGRDPLDAMSRDVPA-DFLSF 253 Query: 257 LDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD + G+ GI P ++ LSP + ++ L++ GA VEI LPH A+ AY+ Sbjct: 254 LDMPLDGLRFGIAPTLMEVEGLSPEVASAQERASRALEEQGATPVEIELPHLNAAIAAYH 313 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I AEA SNLAR+DG+RYG + G K + + +R+ GFG E K R ++G Y+LS+ Sbjct: 314 VIGSAEAFSNLARFDGIRYGYQQPGCKTLGQQISRSRARGFGAEAKRRQLLGAYLLSTEA 373 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDV 433 Y+ +Y+ A+K RTLI RD+ EAF Q VDVIL PT+P AF G+ E+ + +Y +D+ Sbjct: 374 YERYYIAAQKARTLITRDYEEAFRQ-VDVILMPTSPGVAFRFGEIEDPT----RMYLSDM 428 Query: 434 FTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT+++N+ G ISVPA L E +P+ QL+ F + L + +E+ Sbjct: 429 FTISINIVGNAGISVPAGLGETSHLPVSAQLVAPAFHDRELLGWARALER 478 >gi|76801379|ref|YP_326387.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Natronomonas pharaonis DSM 2160] gi|109891959|sp|Q3ISR6|GATA_NATPD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|76557244|emb|CAI48819.1| aspartyl-tRNA(Asn) amidotransferase subunit A [Natronomonas pharaonis DSM 2160] Length = 423 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 185/413 (44%), Positives = 254/413 (61%), Gaps = 13/413 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+ + +KD +T G+ T S +L + P Y++TV ++L D GA ++GK NMDEF MG Sbjct: 20 LDGVTVAVKDNISTDGVRTTCGSEMLADYVPPYDATVVERLRDAGATIVGKTNMDEFGMG 79 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ETS +GP +P + + PGGSSGGS+AAVA ++G+DTGGS+R PA+F Sbjct: 80 TTTETSAFGPTENP-----AAEGRVPGGSSGGSAAAVAAGDADLALGSDTGGSVRCPAAF 134 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VGIKPTYG SR G++++A SL+Q G + TV ++A LL IAG DE D T P Sbjct: 135 CGVVGIKPTYGLVSRYGLVAYANSLEQIGPLAPTVEEAAELLDVIAGVDERDGTTREPPA 194 Query: 251 --PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P Y A D + G+TVGIP E +D + +T+ + L+ AGA E+SLP + Sbjct: 195 GQPTYADAADGDVDGLTVGIPTEL-VDGADEGVRETFDDAVETLESAGATTQEVSLPSVE 253 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A+ AYY+I+ +EASSNLAR+DGVRYG E + E + R GFG+EVK RI++GT Sbjct: 254 TAVQAYYVIAMSEASSNLARFDGVRYGASGDEDGNWNESFAAAREAGFGEEVKRRILLGT 313 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ +D +Y +A+ R +K+DF EAFE VDV+ +PT P F G+ + M Sbjct: 314 YALSAGYHDKYYKQAQDARAWVKQDFDEAFES-VDVLASPTMPVPPFERGESLEDPLKM- 371 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 D TV VN+A LPAISVPA P+GLQL+G F E TL G + Sbjct: 372 -YLADANTVPVNLANLPAISVPAGETADG-PVGLQLVGPAFGEATLIRAGSAL 422 >gi|205355814|ref|ZP_03222583.1| glutamyl-tRNAGln amidotransferase subunit A [Campylobacter jejuni subsp. jejuni CG8421] gi|205346248|gb|EDZ32882.1| glutamyl-tRNAGln amidotransferase subunit A [Campylobacter jejuni subsp. jejuni CG8421] Length = 431 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 184/404 (45%), Positives = 258/404 (63%), Gaps = 12/404 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGS Sbjct: 27 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGS 86 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 87 STASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 141 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 142 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 201 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 202 KTAPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 259 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 260 AAYYIIATAEASTNLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 319 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 320 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 375 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL Sbjct: 376 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLL 419 >gi|57237944|ref|YP_179192.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni RM1221] gi|73621000|sp|Q5HU43|GATA_CAMJR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|57166748|gb|AAW35527.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni RM1221] gi|315058501|gb|ADT72830.1| aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni S3] Length = 453 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 186/415 (44%), Positives = 264/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASTNLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + + Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPIQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|126178722|ref|YP_001046687.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanoculleus marisnigri JR1] gi|125861516|gb|ABN56705.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanoculleus marisnigri JR1] Length = 433 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 184/414 (44%), Positives = 259/414 (62%), Gaps = 14/414 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD +TKGI T S IL+G+ P Y++ V + L GA ++GK NMDEF MG Sbjct: 30 LAGTAVAVKDNISTKGIQTTCASKILEGYVPPYDAYVVELLRQAGAAIVGKTNMDEFGMG 89 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ETS + P +P + PGGSSGGS+AAVA L ++GTDTGGSIR PA+F Sbjct: 90 TTTETSAFAPTKNPV-----DPERVPGGSSGGSAAAVAAGLVPMALGTDTGGSIRCPAAF 144 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+I++A SL+Q G + RTV D + L+ IA YD D+T ++ P Sbjct: 145 CGIVGLKPTYGRVSRYGLIAYANSLEQIGPMARTVEDVSKLMSVIARYDPRDSTMLDRP- 203 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y+ I+G+ VGIP+EY + + P + KT + I L+ GA+ V +S+P ++A Sbjct: 204 --YDHRPSAEIKGLRVGIPEEYFGEGVDPRVAKTVRDAIGVLEGLGAETVPVSIPGMRHA 261 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYV 369 L AYY+I +EASSNLAR+DGVRYG V+ K E Y++ R FG EV+ RIM+GT+ Sbjct: 262 LAAYYVICTSEASSNLARFDGVRYGPAVDTRKSWHEAYQDLRQERFGTEVRRRIMLGTFA 321 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ +Y +A+ R IK DF A + DVI PT PT+AF LG++ S + Sbjct: 322 LSAGYAGRYYAKAQVARRNIKEDFERALREA-DVIAGPTMPTTAFRLGEK---SDPLSMY 377 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +D+ TV N+AG+PAISVP + +P+GLQL+G+ F ++ + E+E Sbjct: 378 LSDILTVPANLAGIPAISVPCGRVD-GLPVGLQLMGRQFEDDRVVDTAYAYEQE 430 >gi|317178809|dbj|BAJ56597.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori F30] Length = 453 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 190/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + N + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPNLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSRILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNAVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|217077249|ref|YP_002334967.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermosipho africanus TCF52B] gi|217037104|gb|ACJ75626.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermosipho africanus TCF52B] Length = 456 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 175/483 (36%), Positives = 273/483 (56%), Gaps = 38/483 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M M +S+ RS V I I+ + ++NA+I VV Sbjct: 1 MKNFKDMTISDVLKENRS-------FVGESISRIKKIDEKINAFITVVENA--------- 44 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 NG IPI IKD TKGI T S IL+ F P Y +TV +KL N ++G Sbjct: 45 ----NGK------IPIAIKDNIVTKGIRTTCASKILENFVPPYNATVVEKLIANDFAIVG 94 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMG+ E S + +PW + G ++ +S V A++G+DT Sbjct: 95 KTNLDEFAMGTGTEYSAFFVTKNPWDHERVAGGSSGGSAAAVASGQVV-----AALGSDT 149 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPA+F G VG KPTYG SR G+++FA SLDQ G IT+T +D+A L+ I G DE Sbjct: 150 GGSIRQPAAFCGVVGFKPTYGLVSRYGLVAFASSLDQIGPITKTTKDAAYLMNVIYGKDE 209 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DAT V+ + ++E L+ + V P+E + + + + +++ + +L+ G K+ Sbjct: 210 KDATTVDRKI-NFEEYLESDFSNVKVAYPEEVFAEGVEEGVKERFEEFVKFLQRKGIKVD 268 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++S Y++ YYII+P+E SSNL+R+DG+RYG R E + +L+ Y N+R G+EV Sbjct: 269 KVSFKELSYSVATYYIIAPSEVSSNLSRFDGIRYGKRDEQEGLLQTYLNSRK-NLGKEVI 327 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIGT+ LS+ YD+++ +A+K+R +I + ++ D I+TPT+P +AF +G+ + Sbjct: 328 RRIMIGTFTLSAAYYDAYFEKAQKVRRIISNKLNDLLKE-YDFIITPTSPITAFKIGEVK 386 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + + D+FT+ N+AG+PAIS+P +P+G+Q++G+ F + + I Sbjct: 387 D---PLVYYMMDIFTIPANLAGIPAISIPFGFSN-GLPVGMQIMGKRFDDAKVLGFANYI 442 Query: 481 EKE 483 EK+ Sbjct: 443 EKD 445 >gi|257460823|ref|ZP_05625924.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter gracilis RM3268] gi|257442154|gb|EEV17296.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter gracilis RM3268] Length = 452 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 182/423 (43%), Positives = 265/423 (62%), Gaps = 17/423 (4%) Query: 64 INGDARDL--EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+A ++ EG+PI IKD K + + S IL G+ Y++TV +KL + G G+ Sbjct: 39 LTGEALNVSGEGVPIAIKDNIQVKNWNVTSASKILQGYVAPYDATVIKKLRERGLAPFGR 98 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMGS+ E+S+YG ++P + PGGSSGGS+AAVA + A++G+DTG Sbjct: 99 TNMDEFAMGSTTESSFYGKTLNP-----TDHSRVPGGSSGGSAAAVAANIAVAALGSDTG 153 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPA+F G VG KP+YGR SR G+ +++ SLDQ G ITR+V D+AIL IAG DE Sbjct: 154 GSIRQPAAFCGCVGFKPSYGRVSRYGLAAYSSSLDQIGPITRSVEDAAILYDIIAGRDEM 213 Query: 242 DATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D+T YE D+ + + + + + K Y +D S + + I LK G +I Sbjct: 214 DSTSY---AGAYESTADKLNADRKLKIAVIKNY-IDEASQQVKEALSLSIEKLKSFGHEI 269 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V L ++Y + YYII+ AEAS+NL+RYDGVRYG R + ++ E+Y NTR GFG EV Sbjct: 270 VYRDLCSSKYDIATYYIIATAEASANLSRYDGVRYGNRAKALNLKELYANTRGEGFGDEV 329 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K R+++GT+VLSS YD++Y++A+K R IK ++ E + D+I P P A+ G+ Sbjct: 330 KRRMLLGTFVLSSGYYDAYYIKAQKARAFIKSEYEEILKDA-DLIFMPIAPGVAYKFGEL 388 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S + +D++T+ VN+AGLPAISVP A ++ + + QLIG+ + E+T+ G Sbjct: 389 ---SDPLRAYLSDIYTIGVNLAGLPAISVPVAKNKEALNISAQLIGRAYDEQTVLDGGLS 445 Query: 480 IEK 482 +EK Sbjct: 446 LEK 448 >gi|308182990|ref|YP_003927117.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori PeCan4] gi|308065175|gb|ADO07067.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori PeCan4] Length = 453 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 193/455 (42%), Positives = 278/455 (61%), Gaps = 16/455 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP------R 119 Query: 152 DKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 DK PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I+ Sbjct: 120 DKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIA 179 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 + S DQ G IT+ V D++IL AI+GYD D+T NL + L++ + + I + Sbjct: 180 YCSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRD-KRFKIAILR 238 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 ++ D S + ++ I LK+ G +IVE + + Y + YYIIS AEASSNLAR+D Sbjct: 239 DHIKD-ASNEVQLAYENTIKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFD 297 Query: 331 GVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 GVRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +I Sbjct: 298 GVRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMI 357 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISV 448 K + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+ Sbjct: 358 KEQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSL 412 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 P A +P+G+Q I + F E++L V +E+E Sbjct: 413 PVAKDSLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|242310615|ref|ZP_04809770.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter pullorum MIT 98-5489] gi|239523013|gb|EEQ62879.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter pullorum MIT 98-5489] Length = 452 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 185/429 (43%), Positives = 270/429 (62%), Gaps = 15/429 (3%) Query: 57 EESDKRIINGDARDLEG--IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 +ES+ G+ +D + +PI IKD K S IL G+ Y +T + L + Sbjct: 30 QESNLNAYVGELQDYQEDFLPIAIKDNINVKNWEITCASKILKGYIAPYNATAVENLLSH 89 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G+ NMDEFAMGS+ +S YG ++P ++++ PGGSSGGS+AAVAG + A Sbjct: 90 KMAPFGRTNMDEFAMGSTTASSCYGKTLNP-KNLNKV----PGGSSGGSAAAVAGGIALA 144 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 ++G+DTGGSIRQPASF G VG+KPTYGR SR G+++++ SLDQ G IT+ V D AIL A Sbjct: 145 ALGSDTGGSIRQPASFCGCVGLKPTYGRVSRYGLVAYSSSLDQIGPITQNVTDCAILFDA 204 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 I+GYD+ D+T NL + L+ + + +P L I +Q+ I L Sbjct: 205 ISGYDKMDSTSANLAPTKTHKNLNPNTKMKIAILPN--LLKDADANIQNAYQKTIDRLSK 262 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSI 353 G I+E + T Y + AYY+I AEASSNLAR+DGVRYG R + ++ E+Y TRS Sbjct: 263 DGHTIIEKEMLDTSYIISAYYVICTAEASSNLARFDGVRYGNRAKDVNNLKELYFKTRSQ 322 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GFG EVK+RI++G++VLSS YD++Y++A+K+RTLI R ++E ++ DVIL+P P++A Sbjct: 323 GFGDEVKNRILLGSFVLSSGYYDAYYIKAQKVRTLIARQYSEILKE-CDVILSPVAPSTA 381 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F G +E S ++ D++T+ VN+AGLPA+S+P + + MP+G+QLIG F E+ + Sbjct: 382 F--GFDECKSPLQMYL-EDIYTIGVNLAGLPALSLPVSE-DDGMPIGMQLIGDSFAEQKI 437 Query: 474 FSVGQIIEK 482 +G +E Sbjct: 438 LDLGLNLEN 446 >gi|217032521|ref|ZP_03438012.1| hypothetical protein HPB128_180g20 [Helicobacter pylori B128] gi|298736534|ref|YP_003729060.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Helicobacter pylori B8] gi|216945799|gb|EEC24422.1| hypothetical protein HPB128_180g20 [Helicobacter pylori B128] gi|298355724|emb|CBI66596.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Helicobacter pylori B8] Length = 453 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 191/454 (42%), Positives = 275/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++ + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASAIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+GYD D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ I LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTIKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R E KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAENVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|210135030|ref|YP_002301469.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori P12] gi|229485885|sp|B6JM61|GATA_HELP2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|210132998|gb|ACJ07989.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter pylori P12] Length = 453 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 190/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L NG G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVMENLHQNGMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|15897836|ref|NP_342441.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus solfataricus P2] gi|23821629|sp|Q97ZG1|GATA_SULSO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|13814137|gb|AAK41231.1| Glutamyl-tRNA amidotransferase, subunit A (gatA-2) [Sulfolobus solfataricus P2] Length = 478 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 186/481 (38%), Positives = 294/481 (61%), Gaps = 19/481 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 +N + + + + LR+K++ A E ++ + I + +NA+I + +++ + K Sbjct: 1 MNRIMIVDLVNDLRNKNLEAEEYIERTYEKIGKYDKYINAFITI---RSKEEVLKEVKES 57 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 IN + L G+ I IKD +T+GI T S +L+ + P Y++TV +KL GAV++GK N Sbjct: 58 INKGGK-LAGVLIAIKDNISTEGIRTTCASKMLEDYIPPYDATVIEKLKKEGAVIIGKTN 116 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGS Sbjct: 117 MDEFAMGSTTETSYFGPTRNPWDL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGS 171 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA++ G+KP+YG SR G++++A SL+Q G + R D +L IAG DE DA Sbjct: 172 IRAPAAYNAIFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDERDA 231 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T +NL + ++E ++S++ + +G+ + L+ + + ++ L GA I + Sbjct: 232 TTINLNL-NFELK-ERSVKNVRIGVLSDI-LEMSEKPVSGVIKDVVNKLSSEGALIEDTK 288 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKH 361 L + +YALPAYYII+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK Sbjct: 289 LGNAEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGMEVKR 347 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI++G+++LS+ Y+ YL+A K+R LIK++ E F++ D++L+PT P +G+ N Sbjct: 348 RILLGSFILSAGYYEEFYLKALKVRNLIKKNLDELFKK-YDILLSPTMPILPPKIGEVIN 406 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + M + D+ TV N+A +PA+S+P +P+GLQL+G+ + L ++ IE Sbjct: 407 DPVRMYAM--DLNTVIANLAAIPALSMPVGFYS-DLPIGLQLMGKYLSDIYLINISSFIE 463 Query: 482 K 482 + Sbjct: 464 R 464 >gi|150020839|ref|YP_001306193.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Thermosipho melanesiensis BI429] gi|149793360|gb|ABR30808.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermosipho melanesiensis BI429] Length = 457 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 166/449 (36%), Positives = 269/449 (59%), Gaps = 19/449 (4%) Query: 46 EVVAQKARAAAEESDKRI-----INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 E+ +K+ + D +I IN +A + IPI +KD TKG+ T S +L+ F Sbjct: 18 EIYVKKSLETIKLIDDKINSFITINENANGI--IPIAVKDNIVTKGLKTTCGSKLLENFV 75 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 P +++TV +KL N ++GK N+DEFAMG+ E S + +PW + + G ++ Sbjct: 76 PSFDATVVKKLKKNNFAIVGKTNLDEFAMGTGTEFSAFFVTKNPWDNERVAGGSSGGSAA 135 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 +S V A++G+DTGGSIRQPA+F G VG KPTYG SR G+++FA SLDQ G Sbjct: 136 AVASGEVV-----AALGSDTGGSIRQPAAFCGVVGFKPTYGLVSRYGLVAFASSLDQIGP 190 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 IT++ D+A ++ I+G DE D+T V + D+E L+++ ++V P+E + + Sbjct: 191 ITKSSGDAAYIMNIISGKDENDSTTVEKNI-DFESLLNENFSNISVAYPEEVFGEGIEEG 249 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 I +++ I +L+ K+ +IS P +Y + YYII+PAE SSNL+R+DG+RYG R++ Sbjct: 250 IKIKFEEFIKFLEKKRIKVEKISFPELKYVVATYYIIAPAEVSSNLSRFDGIRYGNRIKS 309 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + +LE Y +R G+EV RIM+GT+ LS+ YD+++ +A+K+R LI +F + Sbjct: 310 EGLLETYLKSRK-QLGEEVIRRIMLGTFTLSAAYYDAYFEKAQKVRRLISNTIN-SFLEK 367 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D I++PT+P +AF +G+ ++ + + D+FT+ N+AGLPAIS+P +P+G Sbjct: 368 YDFIISPTSPITAFKIGEVKD---PLVYYMMDIFTIPANLAGLPAISIPFGFSN-NLPVG 423 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +Q++G+ F + + IEK+ P Sbjct: 424 MQIMGKRFDDAKVLGFANFIEKDVPIVFP 452 >gi|15604721|ref|NP_219505.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis D/UW-3/CX] gi|76788715|ref|YP_327801.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis A/HAR-13] gi|237802437|ref|YP_002887631.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis B/Jali20/OT] gi|237804352|ref|YP_002888506.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis B/TZ1A828/OT] gi|255310803|ref|ZP_05353373.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis 6276] gi|255317103|ref|ZP_05358349.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis 6276s] gi|6831545|sp|O84006|GATA_CHLTR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109829676|sp|Q3KN19|GATA_CHLTA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|3328391|gb|AAC67593.1| Glu-tRNA Gln Amidotransferase (A subunit) [Chlamydia trachomatis D/UW-3/CX] gi|76167245|gb|AAX50253.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlamydia trachomatis A/HAR-13] gi|231272652|emb|CAX09555.1| aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A [Chlamydia trachomatis B/TZ1A828/OT] gi|231273671|emb|CAX10449.1| aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A [Chlamydia trachomatis B/Jali20/OT] gi|289525049|emb|CBJ14518.1| aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A [Chlamydia trachomatis Sweden2] gi|296434587|gb|ADH16765.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis E/150] gi|296435518|gb|ADH17692.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis G/9768] gi|296436442|gb|ADH18612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis G/11222] gi|296437378|gb|ADH19539.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis G/11074] gi|297139877|gb|ADH96635.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis G/9301] gi|297748134|gb|ADI50680.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlamydia trachomatis D-EC] gi|297749014|gb|ADI51692.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Chlamydia trachomatis D-LC] Length = 491 Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 177/469 (37%), Positives = 282/469 (60%), Gaps = 13/469 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E RD + ++++S + + + IE+ + Q+ A++ + ++A A D ++ GD Sbjct: 8 ELRDAVVNRELSVTAITEYFYHRIESHDEQIGAFLSLCKERALLRASRIDDKLAKGDPIG 67 Query: 71 L-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIPIG+KD G+ T S +L+ F ++STV +++ ++LGKLNMDEFAM Sbjct: 68 LLAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDSTVVRRIEMEDGILLGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ S + P +PW + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+ Sbjct: 128 GSTTRYSAFHPTNNPWDL-----ERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G +T V D A+ + A AG D D+T + Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDPKDSTTRDFF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + +AL + + +G+P+ + LD L + + + ++ ++ G++I+++ L ++ Sbjct: 243 KGTFSQALSLEVPKL-IGVPRGF-LDGLQEDCKENFFEALAVMEREGSRIIDVDLSVLKH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+P YYI++ AEA++NLAR+DGVRYG R + ++ EMY +R GFG+EV RI++G Y Sbjct: 301 AVPVYYIVASAEAATNLARFDGVRYGHRCAQADNMHEMYARSRKEGFGKEVTRRILLGNY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ + Y + +R + F AFE+ DVI P T A ++++ + Sbjct: 361 VLSAERQNIFYKKGMAVRARLIDAFQAAFER-CDVIAMPVCATPAI---RDQDVLDPVSL 416 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 DV+TVAVN+A LPAISVP+ L ++ +PLG+Q IG+ ++ + VG Sbjct: 417 YLQDVYTVAVNLAYLPAISVPSGLSKEGLPLGVQFIGERGSDQQICQVG 465 >gi|317182143|dbj|BAJ59927.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori F57] Length = 453 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 278/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRAEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP TPTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVTPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|166154224|ref|YP_001654342.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis 434/Bu] gi|166155099|ref|YP_001653354.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|255348365|ref|ZP_05380372.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis 70] gi|255502905|ref|ZP_05381295.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis 70s] gi|255506575|ref|ZP_05382214.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis D(s)2923] gi|301335471|ref|ZP_07223715.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis L2tet1] gi|229485869|sp|B0B9B0|GATA_CHLT2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229485870|sp|B0BAY9|GATA_CHLTB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|165930212|emb|CAP03697.1| aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A [Chlamydia trachomatis 434/Bu] gi|165931087|emb|CAP06651.1| aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|296438305|gb|ADH20458.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia trachomatis E/11023] Length = 491 Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 176/469 (37%), Positives = 282/469 (60%), Gaps = 13/469 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E RD + ++++S + + + IE+ + Q+ A++ + ++A A D ++ GD Sbjct: 8 ELRDAVVNRELSVTAITEYFYHRIESHDEQIGAFLSLCKERALLRASRIDDKLAKGDPIG 67 Query: 71 L-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIPIG+KD G+ T S +L+ F ++STV +++ ++LGKLNMDEFAM Sbjct: 68 LLAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDSTVVRRIEMEDGILLGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ S + P +PW + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+ Sbjct: 128 GSTTRYSAFHPTNNPWDL-----ERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G +T V D A+ + A AG D D+T + Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDPKDSTTRDFF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + +AL + + +G+P+ + LD L + + + ++ ++ G++I+++ L ++ Sbjct: 243 KGTFSQALSLEVPKL-IGVPRGF-LDGLQEDCKENFFEALAVMEREGSRIIDVDLSVLKH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+P YYI++ AEA++NLAR+DGVRYG R + ++ EMY +R GFG+EV RI++G Y Sbjct: 301 AVPVYYIVASAEAATNLARFDGVRYGHRCAQADNMHEMYARSRKEGFGKEVTRRILLGNY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ + Y + +R + F AFE+ DVI P T A ++++ + Sbjct: 361 VLSAERQNIFYKKGMAVRARLIDAFQAAFER-CDVIAMPVCATPAI---RDQDVLDPVSL 416 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 D++TVAVN+A LPAISVP+ L ++ +PLG+Q IG+ ++ + VG Sbjct: 417 YLQDIYTVAVNLAYLPAISVPSGLSKEGLPLGVQFIGERGSDQQICQVG 465 >gi|268679126|ref|YP_003303557.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Sulfurospirillum deleyianum DSM 6946] gi|268617157|gb|ACZ11522.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfurospirillum deleyianum DSM 6946] Length = 452 Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 175/413 (42%), Positives = 262/413 (63%), Gaps = 11/413 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPI IKD G + S+IL G+ Y +TV + +G G+ NMDEFAMGSS Sbjct: 50 GIPIAIKDNIQVNGWEVTSASNILQGYVAPYNATVIDNMLRHGLAPFGRTNMDEFAMGSS 109 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+S+YG ++P PGGSSGGS+AAVAG + A++G+DTGGSIRQPA+F G Sbjct: 110 TESSFYGKTLNPHNP-----NCVPGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPAAFCG 164 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYG+ SR G+ +++ SLDQ G IT+ V D+AIL IAG++ D+T ++ Sbjct: 165 CVGLKPTYGKVSRYGLGAYSSSLDQIGPITQNVEDAAILYDIIAGHEPKDSTSASMAHQS 224 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L+ + MT+ + + Y L+ S + + +GI L+ AG KI+ + +++Y + Sbjct: 225 VADKLNAD-RKMTIAVIENY-LNEASDEVREKMLEGIKALEKAGHKIIYRNFINSKYDIA 282 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YY+I+ AEAS+NL+RYDGVRYG R +++ EM+ +RS+GFG+EVK RI++GT+VLSS Sbjct: 283 TYYVIATAEASANLSRYDGVRYGNRGSNENLKEMFIQSRSLGFGEEVKRRILLGTFVLSS 342 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y++A+K R IK + F++ ++I P TPT+AF G + + + +D Sbjct: 343 GYYDAYYIKAQKARHFIKAQYEAIFKE-AELIFMPVTPTTAFEFGSKAD---PLEMYLSD 398 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++T+++N+ GLP ISVP K +P+G QLIGQ + E+ L +E+ G Sbjct: 399 IYTISLNLVGLPGISVPLGFDSKGLPVGGQLIGQAYGEQALLDGALSLERALG 451 >gi|297380033|gb|ADI34920.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Helicobacter pylori v225d] Length = 453 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 191/454 (42%), Positives = 278/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNNMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISVYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA PL N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSA-PLF---NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDSLGLPIGMQFIARAFDEQSLLDVSYALEQE 447 >gi|284926289|gb|ADC28641.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni IA3902] Length = 453 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 185/415 (44%), Positives = 262/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++ L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +S YG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSCYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTASNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|284997652|ref|YP_003419419.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus L.D.8.5] gi|284445547|gb|ADB87049.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus L.D.8.5] Length = 474 Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 189/476 (39%), Positives = 290/476 (60%), Gaps = 19/476 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + L++K++ A E V+ + I + NA+I + +++ K IN Sbjct: 2 IVELVNDLKNKNLEAEEYVERTYEKIGKYDKYTNAFITI---RSKEEVLREVKENINKGG 58 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L GI I IKD +TKGI T S +L+ + P Y++TV +KL GAV++GK NMDEFA Sbjct: 59 K-LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATVIEKLKKEGAVIVGKTNMDEFA 117 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR PA Sbjct: 118 MGSTTETSYFGPTRNPWNL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPA 172 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ T G+KP+YG+ SR G++++A SL+Q G + R D +L IAG D+ DAT ++L Sbjct: 173 AYNATFGLKPSYGKVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTIDL 232 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + ++E +Q+++ + +GI + L+ + + I L GA I + L + + Sbjct: 233 SL-NFEFK-EQNVKSVRIGILSDI-LEMSEKPVSGVIKDVIDKLSSEGALIEDTKLGNAE 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 YALPAYYII+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK RI++G Sbjct: 290 YALPAYYIIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGIEVKRRILLG 348 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +++LS+ Y+ YL+A K+R LIK+ E F++ D++++PT P +G+ N+ M Sbjct: 349 SFILSAGYYEEFYLKALKVRNLIKKSLDELFKK-YDILVSPTMPILPPKIGEVINDPVRM 407 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ TV N+A +PA+S+PA +P+GLQL+G+ + L ++ IE+ Sbjct: 408 YAM--DLNTVIANLAAIPALSLPAGFY-NDLPIGLQLMGKYLSDIYLINISSYIER 460 >gi|284175642|ref|ZP_06389611.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus solfataricus 98/2] gi|261602541|gb|ACX92144.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus solfataricus 98/2] Length = 474 Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 185/469 (39%), Positives = 288/469 (61%), Gaps = 19/469 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 LR+K++ A E ++ + I + +NA+I + +++ + K IN + L G+ Sbjct: 9 LRNKNLEAEEYIERTYEKIGKYDKYINAFITI---RSKEEVLKEVKESINKGGK-LAGVL 64 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I IKD +T+GI T S +L+ + P Y++TV +KL GAV++GK NMDEFAMGS+ ET Sbjct: 65 IAIKDNISTEGIRTTCASKMLEDYIPPYDATVIEKLKKEGAVIIGKTNMDEFAMGSTTET 124 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR PA++ G Sbjct: 125 SYFGPTRNPWDL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAYNAIFG 179 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KP+YG SR G++++A SL+Q G + R D +L IAG DE DAT +NL + ++E Sbjct: 180 LKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDERDATTINLNL-NFEL 238 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 ++S++ + +G+ + L+ + + ++ L GA I + L + +YALPAYY Sbjct: 239 K-ERSVKNVRIGVLSDI-LEMSEKPVSGVIKDVVNKLSSEGALIEDTKLGNAEYALPAYY 296 Query: 316 IISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 II+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK RI++G+++LS+ Sbjct: 297 IIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGMEVKRRILLGSFILSAG 355 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 Y+ YL+A K+R LIK++ E F++ D++L+PT P +G+ N+ M + D+ Sbjct: 356 YYEEFYLKALKVRNLIKKNLDELFKK-YDILLSPTMPILPPKIGEVINDPVRMYAM--DL 412 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 TV N+A +PA+S+P +P+GLQL+G+ + L ++ IE+ Sbjct: 413 NTVIANLAAIPALSMPVGFY-SDLPIGLQLMGKYLSDIYLINISSFIER 460 >gi|195356524|ref|XP_002044716.1| GM23359 [Drosophila sechellia] gi|194133916|gb|EDW55432.1| GM23359 [Drosophila sechellia] Length = 508 Score = 302 bits (774), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 180/460 (39%), Positives = 270/460 (58%), Gaps = 18/460 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + ++A A +S++R + DL+G+ I IKD F TK +HT S +L F Sbjct: 40 LNAFVRLTQEQAAQQALDSEERYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W +D GG Sbjct: 100 VPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTLDSLYGPTKNIWSEDLDKDHWCIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYR 273 GI R+V D +L +AG D+ D+T + P +PD + + + +GIPKEY Sbjct: 220 GIFARSVSDCVAILNTVAGPDKLDSTTIRKPFTKLNLPDVGQI---DLSTVRIGIPKEYH 276 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LS + +TW + L+ +GA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 277 CHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIE 336 Query: 334 YGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R + + ++Y +R+ GF + VK RI+ G ++L + YD ++ +A ++R LI D Sbjct: 337 YGHRAADERSTEQLYALSRAEGFNEVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAED 396 Query: 393 FTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAI 446 F + F E+ VD++LTPTT T A PL K+ + + D T NMAG+PA+ Sbjct: 397 FAKVFDSSAKEERVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPANMAGIPAV 455 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 S+P L +PL LQL+ E+ L +V + IE + + Sbjct: 456 SIPIRLSRAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|261837939|gb|ACX97705.1| Glu-tRNA(Gln) amidotransferase subunit A [Helicobacter pylori 51] Length = 453 Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPMQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|315932195|gb|EFV11138.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter jejuni subsp. jejuni 327] Length = 403 Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 185/413 (44%), Positives = 263/413 (63%), Gaps = 16/413 (3%) Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGSS Sbjct: 1 MPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGSST 60 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F G Sbjct: 61 ASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGC 115 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 116 VGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFIKT 175 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L+ + + + + + + Y D S + + I LK G +IV +L +++ + A Sbjct: 176 APNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDIAA 233 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VLSS Sbjct: 234 YYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVLSS 293 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y++A+K R IK + E Q D+I P TPT+AF K + M D Sbjct: 294 GYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYLED 349 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 V+T++VN+AGL ISVP A ++++ + QLI + + E+TL S+ Q+I+ Sbjct: 350 VYTISVNLAGLGGISVPVAKDKEELNISAQLICKAYDEQTLLDGALSLEQMIK 402 >gi|188527323|ref|YP_001910010.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori Shi470] gi|229485887|sp|B2USZ8|GATA_HELPS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|188143563|gb|ACD47980.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori Shi470] gi|308063380|gb|ADO05267.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori Sat464] Length = 453 Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDSLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|47212354|emb|CAF93908.1| unnamed protein product [Tetraodon nigroviridis] Length = 440 Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 183/479 (38%), Positives = 254/479 (53%), Gaps = 56/479 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 LR IS EL + I+ + +NAYI V + A AEE++ R++ G R L+GI Sbjct: 4 LREGRISPTELCRKCLNQIKKTQ-HLNAYITVTEEIALKQAEEAETRLLQGVPRGPLDGI 62 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P KD F T I T S +L + P + +TV QKL D GA+++GK MDEFAMG Sbjct: 63 PFAAKDNFCTANIPTTCASRMLKDYVPPFSATVVQKLLDQGAILMGKTKMDEFAMG---- 118 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S+G+DTGGS R P + G V Sbjct: 119 ----------------------------------------SLGSDTGGSTRNPGALCGVV 138 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 +KPTYG SR G+I S+D GI+TRTV D+AI+L + G D D+T + P E Sbjct: 139 ALKPTYGLLSRHGLIPLMNSMDVPGILTRTVDDAAIVLGVLQGLDRKDSTTIPPLSPLLE 198 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 ++ + VGIPKEY LS W++ + GA++V++SLPHTQY++ Y Sbjct: 199 LPKKFDVKNICVGIPKEYHAPGLSEDTAAEWRRVADMFEREGARVVQVSLPHTQYSIVCY 258 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +I+ E +SN+AR+DG+ YG R E MY +TR GF V+ RI+ G Y L + Sbjct: 259 HILCCVEVASNMARFDGLEYGHRSSVVASTEAMYASTRHEGFNDVVRGRILSGNYFLLKQ 318 Query: 374 ---CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENNSGSMG 427 + ++++A+K+R +I DF F GVDV+LTPTT T +E+N S S Sbjct: 319 KLGNFQHYFVKAQKVRRMITDDFKRVFGSGVDVLLTPTTLADATCYADFTQEDNRSRSA- 377 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 DVFT NMAGLPA+SVP AL + +P+GLQLIG +++ L SV Q IE+ G+ Sbjct: 378 --QEDVFTQPANMAGLPAVSVPTALSGRGLPIGLQLIGPAQQDKKLLSVAQWIERRVGF 434 >gi|139438223|ref|ZP_01771776.1| Hypothetical protein COLAER_00765 [Collinsella aerofaciens ATCC 25986] gi|133776420|gb|EBA40240.1| Hypothetical protein COLAER_00765 [Collinsella aerofaciens ATCC 25986] Length = 504 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 191/470 (40%), Positives = 278/470 (59%), Gaps = 18/470 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 D +A E+ + + AIE + A+++V + A AA D G L G+P+ I Sbjct: 21 DFTATEVAQASLAAIEAREDGVQAFLQVAPELALEAAARVDADRAAGKPLPPLAGVPLAI 80 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G T S +L ++ Y +T Q++ D G + +GK NMDEFA GSS E+S + Sbjct: 81 KDNMNLVGTRTTCASRMLGDYQSVYTATCVQRMLDAGCLPMGKANMDEFAFGSSTESSAF 140 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 +PW + + PGGSSGGS+AAVA A S+G+DTGGSIRQPAS G VG KP Sbjct: 141 HRTNNPWDT-----ERVPGGSSGGSAAAVAAGEVALSLGSDTGGSIRQPASLCGVVGFKP 195 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI--AGYDECDATCVNLPVPDYERA 256 TYG SR G+++F SLDQ G RTV D A+ + A+ AG+D D T + V D+ Sbjct: 196 TYGAVSRYGVVAFGSSLDQVGPFGRTVEDVALAMNALTGAGHDPYDCTSQDCAV-DFTEH 254 Query: 257 LDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L+ SI+G VG IP + L+P + Q+ L++ GA++VE+ LPH A+ AYY Sbjct: 255 LNDSIEGKRVGIIPAFMEAEGLTPEVKAAVQRAAQELQNQGAELVEVDLPHLDAAIAAYY 314 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I PAEA SNLAR+DG+RYG + EG ++ + +R+ GFG E K R M+G Y+LSS Sbjct: 315 VIGPAEAFSNLARFDGIRYGYQEEGCANLSDQSSLSRAHGFGAEAKRRQMLGAYLLSSGV 374 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDV 433 YD +Y A+K RTLI +D+ A+ + VD IL P +P +AF G+ + + +Y +D+ Sbjct: 375 YDKYYYAAQKARTLITQDYDAAYAK-VDTILMPASPRTAFKFGEISDPT----QMYLSDL 429 Query: 434 FTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSVGQIIEK 482 +T+++N+ G ISVP L E ++P+ QL+G FR+ L + + +E+ Sbjct: 430 YTISLNICGNGGISVPLGLGEDTQLPVSAQLVGPAFRDRQLLTFARALER 479 >gi|307637522|gb|ADN79972.1| Aspartyl-tRNA-Asn-amido transferase subunitA / Glutamyl-tRNA-Gln-amidotransferase subunitA [Helicobacter pylori 908] gi|325996111|gb|ADZ51516.1| Aspartyl-tRNA amidotransferase subunit A/Glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter pylori 2018] gi|325997707|gb|ADZ49915.1| Aspartyl-tRNA-Asn-amidotransferase subunit A/Glutamyl-tRNA-Gln- amidotransferase subunit A [Helicobacter pylori 2017] Length = 453 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+GYD D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G ++VE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEVVEKKILDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R E KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAENIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PT+A N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTTAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|67904826|ref|XP_682669.1| hypothetical protein AN9400.2 [Aspergillus nidulans FGSC A4] gi|40747311|gb|EAA66467.1| hypothetical protein AN9400.2 [Aspergillus nidulans FGSC A4] gi|259488242|tpe|CBF87540.1| TPA: amidase, possible glutamyl-tRNA amidotransferase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 559 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 193/515 (37%), Positives = 289/515 (56%), Gaps = 52/515 (10%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA---RAAAEESDKRIINGDARD-LE 72 RS + ++ L A ++SN +NA+I + + + A+++D R G R L+ Sbjct: 49 RSSGLMSLLLEAERYVANQSSNRMLNAFITPLCRHSGRWHDQAKDADIRGKQGKLRSRLD 108 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G I KD T+ T S LD F + +TV Q+L D GA++ GK N+DEF MGS Sbjct: 109 GRFIAFKDNICTRDFPTTCASKSLDTFTSPFNATVVQQLEDAGAIVAGKTNLDEFGMGSH 168 Query: 133 NETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + S +G V++ R DS KF + GGSSGG++ AVA C A++GTDTGGSIR PA++T Sbjct: 169 SIYSSFGHVMNTRRGDDS--KFLSAGGSSGGNAVAVATDQCYAALGTDTGGSIRLPAAYT 226 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT------- 244 GTVG KP+YG SR G+I++A SLD GI+ + V + + + +D D T Sbjct: 227 GTVGFKPSYGLLSRWGVIAYANSLDTVGILAKRVSVARDVFDVLNKHDPRDPTSISPSSR 286 Query: 245 ---CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 L +P L + + + +GIP EY + L+P++ + W + +L+ G I Sbjct: 287 SRISSKLNLPQLTSRL--TSRPLRIGIPLEYNISELAPSVRQAWCHSLEYLRQQGHTIQP 344 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR----VEGKDILEMYENTRSIGFGQ 357 +SLP T+ AL AYY+++PAEASSNLA+YDGVRYG R E + +Y TR GFG Sbjct: 345 VSLPMTKLALSAYYVLAPAEASSNLAKYDGVRYGTRSDDSTENQSETYLYAKTRGAGFGP 404 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-------------------- 397 EVK RIM+G + LS++ D+++++A++IR L++ DF AF Sbjct: 405 EVKRRIMLGAFSLSAQAIDNYFIQAQRIRRLVRHDFDAAFQAEHPLAAEIRNVELRQQAK 464 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI---YNDVFTVAVNMAGLPAISVP----- 449 + G+DV+++PT PT + + S ++ NDVFTV ++AGLPAISVP Sbjct: 465 QTGIDVLISPTAPTPPPTISDITDTSTKRSNLDAYINDVFTVPASLAGLPAISVPVSGKD 524 Query: 450 -AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A E + G+Q+IGQ +E + VG+++E+ Sbjct: 525 NAGNQEGDILAGIQVIGQYGDDELVLKVGELLERR 559 >gi|317180594|dbj|BAJ58380.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori F32] Length = 453 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNAVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRAEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|217034123|ref|ZP_03439543.1| hypothetical protein HP9810_868g16 [Helicobacter pylori 98-10] gi|216943407|gb|EEC22863.1| hypothetical protein HP9810_868g16 [Helicobacter pylori 98-10] Length = 453 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNAVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAKNVKDLKELYLKSRTEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|315586504|gb|ADU40885.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter pylori 35A] Length = 453 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNVKDLKELYLKSRTEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|15645449|ref|NP_207623.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori 26695] gi|2492832|sp|P56114|GATA_HELPY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2313964|gb|AAD07880.1| Glu-tRNA(Gln) amidotransferase, subunit A (gatA) [Helicobacter pylori 26695] Length = 453 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 191/455 (41%), Positives = 277/455 (60%), Gaps = 16/455 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP------R 119 Query: 152 DKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 DK PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I+ Sbjct: 120 DKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIA 179 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 + S DQ G IT+ V D++IL AI+GYD D+T NL + L++ + + + Sbjct: 180 YCSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRD-KRFKIAVLM 238 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 ++ D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+D Sbjct: 239 DHIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFD 297 Query: 331 GVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 GVRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +I Sbjct: 298 GVRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLII 357 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISV 448 K + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+ Sbjct: 358 KEQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSL 412 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 P A +P+G+Q I + F E++L V +E+E Sbjct: 413 PVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|297622614|ref|YP_003704048.1| glutamyl-tRNA(gln) amidotransferase subunit A [Truepera radiovictrix DSM 17093] gi|297163794|gb|ADI13505.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Truepera radiovictrix DSM 17093] Length = 490 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 194/473 (41%), Positives = 276/473 (58%), Gaps = 23/473 (4%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 AV R+R A +V + + + NA+I + + A A A D R+ G+ Sbjct: 17 AVGSGRER-------AETVVRRALSRADRVQRETNAFITLCGEAALARARALDARLAAGE 69 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+P+ +KD T+G+ T A S L+ F P +++TV +L GAV++GK N+DE Sbjct: 70 APPPLAGVPVAVKDNLCTRGVRTTAGSRSLEHFVPPFDATVVARLEAAGAVVIGKTNLDE 129 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F MGS+NE S +GPV +PW + PGGSSGGS+ AVA + ++GTDTGGS+RQ Sbjct: 130 FGMGSTNEHSAFGPVRNPW-----DLERVPGGSSGGSAVAVAAGVVPLALGTDTGGSVRQ 184 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASFTG +G KPTYG SR G+I+FA SLDQ G+ R+ RD A+ L A+AG D DAT + Sbjct: 185 PASFTGVLGFKPTYGVLSRSGVIAFASSLDQVGVFGRSARDLALALTAMAGPDPLDATSL 244 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P + + G+ VG+ KE SP + + + + L+D GA++ E+SLPH Sbjct: 245 EAPPLSADLGTGTELSGLRVGLIKELSGAGNSPEVREALGRTTAALRDLGAEVSEVSLPH 304 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL---EMYENTRSIGFGQEVKHRI 363 Y AYYI++PAEASSNLAR+DG+ Y RV G+ L E+ +R FG EV+ RI Sbjct: 305 APYGTAAYYIVAPAEASSNLARFDGMVYSRRV-GESRLGQGEVMRRSRGALFGPEVRRRI 363 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GTY LS+ Y++ Y +A K+R LI + AF + D++LTPT P+ A+ LG+ + Sbjct: 364 LVGTYALSAGYYEAFYGKALKVRRLIADEVRRAFGR-FDLLLTPTAPSPAYRLGEVAD-- 420 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + DV TV N+ G A+SVPA +P G+Q + P + L V Sbjct: 421 -PLRMYLGDVDTVLANLVGCGAVSVPAP--TPGLPCGVQFLAPPLEDARLLRV 470 >gi|319957284|ref|YP_004168547.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Nitratifractor salsuginis DSM 16511] gi|319419688|gb|ADV46798.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Nitratifractor salsuginis DSM 16511] Length = 449 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 179/417 (42%), Positives = 260/417 (62%), Gaps = 13/417 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+PI +KD KG + S IL G+ Y++TV + L G G+ NMDEFAMGS Sbjct: 42 EGVPILLKDNIQVKGWNVTCASKILQGYVAPYDATVVENLRAAGMAPFGRANMDEFAMGS 101 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S YGP ++P + PGGSSGGS+AAVA A++G+DTGGSIRQPA++ Sbjct: 102 TTESSVYGPTLNPHDT-----SRVPGGSSGGSAAAVAAGEAIAALGSDTGGSIRQPAAYC 156 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KPTYGR SR G+ ++A SLDQ G IT+ V D+AIL AI G+D D+T Sbjct: 157 GVVGFKPTYGRVSRYGLGAYASSLDQIGPITQNVEDAAILYDAIKGHDPRDSTSAEFEKE 216 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 +D + +T+ + Y + SP + + ++ + L+ G IV L +T+Y + Sbjct: 217 PIYGQIDPD-RKLTIAVIDNYVAE-ASPAVQRAHEEALKALEAEGHTIVHKELSNTKYDI 274 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 YYI++ AEA++NLARYDGVRYG R + K++ ++Y TRS GFG+EVK RI++G +VL Sbjct: 275 ATYYIVATAEAATNLARYDGVRYGRRCDDPKNLEDLYFRTRSEGFGEEVKRRILLGNFVL 334 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++YL+A+K+R LI+ +F + F + D+IL+P P+ A LG + + Sbjct: 335 SSGYYDAYYLKAQKVRHLIRDEFNKIFAEA-DLILSPVAPSVAPKLGALAD---PLEMYK 390 Query: 431 NDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +D++T+AVN+ GLP +S+P E MP+GLQL+ + F E+TLF +E+ Y Sbjct: 391 SDMYTIAVNLVGLPGLSLPVMKDSETGMPVGLQLLAKAFDEKTLFDGAASLERAVNY 447 >gi|227830229|ref|YP_002832009.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus islandicus L.S.2.15] gi|229579044|ref|YP_002837442.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus islandicus Y.G.57.14] gi|227456677|gb|ACP35364.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus L.S.2.15] gi|228009758|gb|ACP45520.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus Y.G.57.14] gi|323474593|gb|ADX85199.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus REY15A] gi|323477325|gb|ADX82563.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus HVE10/4] Length = 474 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 189/476 (39%), Positives = 289/476 (60%), Gaps = 19/476 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + L++K++ A E V+ + I + NA+I + +++ K IN Sbjct: 2 IVELVNDLKNKNLEAEEYVERTYEKIGKYDKYTNAFITI---RSKEEVLREVKENINKGG 58 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L GI I IKD +TKGI T S +L+ + P Y++TV +KL GAV++GK NMDEFA Sbjct: 59 K-LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATVIEKLKKEGAVIVGKTNMDEFA 117 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR PA Sbjct: 118 MGSTTETSYFGPTRNPWNL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPA 172 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ T G+KP+YG SR G++++A SL+Q G + R D +L IAG D+ DAT ++L Sbjct: 173 AYNATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTIDL 232 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + ++E +Q+++ + +GI + L+ + + I L GA I + L + + Sbjct: 233 SL-NFEFK-EQNVKSVRIGILSDI-LEMSEKPVSGVIKDVIDKLSSEGALIEDTKLGNAE 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 YALPAYYII+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK RI++G Sbjct: 290 YALPAYYIIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGIEVKRRILLG 348 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +++LS+ Y+ YL+A K+R LIK+ E F++ D++++PT P +G+ N+ M Sbjct: 349 SFILSAGYYEEFYLKALKVRNLIKKSLDELFKK-YDILVSPTMPILPPKIGEVINDPVRM 407 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ TV N+A +PA+S+PA +P+GLQL+G+ + L ++ IE+ Sbjct: 408 YAM--DLNTVIANLAAIPALSLPAGFY-NDLPIGLQLMGKYLSDIYLINISSYIER 460 >gi|172048410|sp|A8Z6P5|GATA_CAMC1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|158605023|gb|ABW74824.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Campylobacter concisus 13826] Length = 452 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 175/410 (42%), Positives = 257/410 (62%), Gaps = 11/410 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+PI IKD KG + S IL G+ Y +TV +KL G+ NMDEFAMGS Sbjct: 49 EGVPIAIKDNIQVKGWSVTSASKILQGYVAPYNATVIEKLLSKNLAPFGRTNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S+YG ++P PGGSSGGS+AAVA L A++G+DTGGSIRQPA+F Sbjct: 109 TTESSFYGKTLNPLNHA-----HVPGGSSGGSAAAVAAGLAVAALGSDTGGSIRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+ +++ SLDQ G I + V D+AIL AIAG+D D+T ++P Sbjct: 164 GCVGLKPTYGRVSRYGLGAYSSSLDQIGPIAQNVEDAAILYDAIAGHDPKDSTSADVPFV 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 +D + + + + + K Y ++ S I LK G + + ++Y + Sbjct: 224 SISDKIDGN-KKLKICVIKNY-VENASEQTKAALNLAIEKLKSHGHSVTYTNFEDSKYDV 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII+ AEAS+NL+RYDGVRYG R E +++ E+Y N+RS GFG+EVK RI++GT+VLS Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGRRAEARNLKELYVNSRSEGFGEEVKRRILLGTFVLS 341 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++Y++A+K R IK + + E+ D+I P P++A+ G +S + + Sbjct: 342 SGYYDAYYIKAQKARAHIKAQYEKILEEN-DLIFMPVAPSTAYKFGA---HSDPLQAYLS 397 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 D++T++VN+AGLPAISVP ++ + + QLI + + E+TL + + +E Sbjct: 398 DIYTISVNLAGLPAISVPVGKDDQNLNVSAQLIAKAWDEQTLINGAKSLE 447 >gi|317177338|dbj|BAJ55127.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori F16] Length = 453 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRAEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|153951202|ref|YP_001397821.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. doylei 269.97] gi|166217658|sp|A7H2U1|GATA_CAMJD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|152938648|gb|ABS43389.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 453 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 184/415 (44%), Positives = 260/415 (62%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++ L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFAPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +S YG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSCYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNAN-EKLKIAVIENYVND-ADTEVKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTMAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|332673364|gb|AEE70181.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter pylori 83] Length = 453 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 277/454 (61%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAKNVKDLKELYLKSRAEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|317014240|gb|ADU81676.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori Gambia94/24] Length = 453 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 191/455 (41%), Positives = 277/455 (60%), Gaps = 16/455 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVIESLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP------R 119 Query: 152 DKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 DK PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I+ Sbjct: 120 DKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIA 179 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 + S DQ G IT+ V D++IL AI+GYD D+T +NL + L++ + + I + Sbjct: 180 YCSSFDQIGPITQNVEDASILFDAISGYDSKDSTSINLKPTQTFKNLNRD-KRFKIAILR 238 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 ++ D S + ++ I LK+ G +IVE + + Y + YYIIS AEASSNLAR+D Sbjct: 239 DHIKD-ASSGVQLAYENTIKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFD 297 Query: 331 GVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 GVRYG R E KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +I Sbjct: 298 GVRYGRRAENVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMI 357 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISV 448 K + + FE D+I TP PT+A N S +Y +D++T+ N++GLPA+S+ Sbjct: 358 KEQYNKIFEDA-DLIFTPVAPTTAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSL 412 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 P + +P+G+Q I + F E++L V +E+E Sbjct: 413 PVSKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|283954623|ref|ZP_06372141.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793815|gb|EFC32566.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 414] Length = 453 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 183/415 (44%), Positives = 263/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++ L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLRANGFTPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +S YG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSCYGRTLNPLNF-----ECVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T VN+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSVNIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTAPNLNAN-KKLKITVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E ++ D+I P PT+AF +++ M Sbjct: 342 SSGYYDAYYIKAQKTRAFIKAKYEEILQE-CDLIFMPVAPTTAFKFNTQKS---PMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A + + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLAGISVPVAKDKDGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|108563241|ref|YP_627557.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori HPAG1] gi|122386436|sp|Q1CT39|GATA_HELPH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|107837014|gb|ABF84883.1| Glu-tRNA amidotransferase, subunit A [Helicobacter pylori HPAG1] Length = 453 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|86150978|ref|ZP_01069194.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|121612634|ref|YP_001000739.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni 81-176] gi|218562675|ref|YP_002344454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124547|ref|YP_004066551.1| glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|20138410|sp|Q9PNN2|GATA_CAMJE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|166217659|sp|A1W048|GATA_CAMJJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|85842148|gb|EAQ59394.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|87249127|gb|EAQ72088.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|112360381|emb|CAL35177.1| Glu-tRNAGln amidotransferase subunit A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315018269|gb|ADT66362.1| glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 453 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 185/415 (44%), Positives = 262/415 (63%), Gaps = 16/415 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++ L NG G+ NMDEFAMGS Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +S YG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 STASSCYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 224 KTVPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 452 >gi|308062151|gb|ADO04039.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori Cuz20] Length = 453 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGTSAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKRMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|148926034|ref|ZP_01809720.1| Glu-tRNAGln amidotransferase subunit A [Campylobacter jejuni subsp. jejuni CG8486] gi|145845513|gb|EDK22605.1| Glu-tRNAGln amidotransferase subunit A [Campylobacter jejuni subsp. jejuni CG8486] Length = 403 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 185/413 (44%), Positives = 262/413 (63%), Gaps = 16/413 (3%) Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD + KG + S IL G+ Y+++V L NG G+ NMDEFAMGSS Sbjct: 1 MPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFAMGSST 60 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +SYYG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F G Sbjct: 61 ASSYYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGC 115 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 116 VGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFIKT 175 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L+ + + + + + + Y D S + + I LK G +IV +L +++ + A Sbjct: 176 APNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDIAA 233 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VLSS Sbjct: 234 YYIIATAEASTNLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVLSS 293 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y++A+K R IK + E Q D+I P TPT+AF K + M D Sbjct: 294 GYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYLED 349 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIE 481 V+T++VN+AGL ISVP A ++ + + QLI + + E+TL S+ Q+I+ Sbjct: 350 VYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQMIK 402 >gi|124485961|ref|YP_001030577.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanocorpusculum labreanum Z] gi|124363502|gb|ABN07310.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanocorpusculum labreanum Z] Length = 424 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 181/413 (43%), Positives = 253/413 (61%), Gaps = 13/413 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GI + IKD +TK I T S IL G+ P Y++ V +L GAV+ GK NMDEF MG Sbjct: 22 LSGIRVSIKDNISTKDIETTCASKILKGYIPPYDAHVITRLKAQGAVIAGKTNMDEFGMG 81 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ E S +G ++P T SSGGS+AAVAG L + ++G+DTGGS+R PA++ Sbjct: 82 STTENSAFGAALNPHDVTRVTGG-----SSGGSAAAVAGGLVSMALGSDTGGSVRCPAAW 136 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KP+YGR SR G+I++A S +Q G +T VRD+A L IAG+D D+T VN P Sbjct: 137 CGVVGLKPSYGRVSRFGLIAYANSFEQIGPMTTNVRDAAKLFSVIAGHDIKDSTSVNKP- 195 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y+ + I G T+GIPKEY + + + ++ I L++ GA IV++SLP +YA Sbjct: 196 --YDGNVVPEISGKTIGIPKEYFGEGVDAGVAAEVRKAIGKLEELGANIVDVSLPSMKYA 253 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LPAYY+ EASSNL R+DGVR+G E + Y R GFG EV+ RI++GT+ Sbjct: 254 LPAYYVTCTCEASSNLGRFDGVRFGPEPEMNLPWHDAYTKVREAGFGAEVRRRILLGTFA 313 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ Y +Y++A+ + LI +DF A E D++ PT P A +G E + + Sbjct: 314 LSAGYYGKYYVKAQHAKQLIAKDFAAALET-CDMLAGPTMPNIAPKIG--ELTADPLQMY 370 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV VN+AG+PAISVP + KMP+GLQL+G+ F EET+ + E+ Sbjct: 371 QADILTVPVNIAGIPAISVPCGIAH-KMPVGLQLMGRMFGEETILNAALAYEE 422 >gi|261839351|gb|ACX99116.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Helicobacter pylori 52] Length = 453 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILKGYIAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +R+ GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNVKDLKELYLKSRTEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N+ S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NHHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|154150400|ref|YP_001404018.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus Methanoregula boonei 6A8] gi|153998952|gb|ABS55375.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanoregula boonei 6A8] Length = 434 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 179/414 (43%), Positives = 252/414 (60%), Gaps = 14/414 (3%) Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 DL GI + +KD +T GI T S IL G+ P Y++ L + GA + GK NMDEF M Sbjct: 30 DLSGIAVAVKDNISTLGIETTCASKILKGYVPPYDAHAVTLLKNAGAAVAGKTNMDEFGM 89 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+S E S +GP ++P + PGGSSGGS+AAVA + ++GTDTGGSIR PA+ Sbjct: 90 GTSTENSAFGPTLNPRDT-----GRVPGGSSGGSAAAVAAGMVRMALGTDTGGSIRCPAA 144 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+KPTYGR SR G+I++A SL+ G + V D ++L+ IAG+D D T + P Sbjct: 145 FCGIVGLKPTYGRVSRYGLIAYANSLETIGPMAANVSDVSLLMSVIAGHDRRDTTSYDRP 204 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y+ I+ + +GIP+EY + P + ++ I L++ GA V S+P +Y Sbjct: 205 ---YQHTPSAEIKRLRIGIPEEYFGAGVDPEVASVVKRAIGRLEELGAVTVPCSIPSMEY 261 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTY 368 AL AYY+I +EASSNLAR+DGVRYG + K Y++ R GFG EV+ RIM+GT+ Sbjct: 262 ALAAYYVICTSEASSNLARFDGVRYGPAADTKKSWHAAYQDVRKQGFGPEVRRRIMLGTF 321 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LSS Y +Y +A+ R +++DF VDV+ PT PT AF LG++ S + Sbjct: 322 ALSSGYYGKYYAKAQVARENVRKDFARLLTD-VDVLCGPTMPTIAFKLGEK---SDPLSM 377 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ TV VN+AG+PAISVP + MP+GLQ++G+PF +E + V E+ Sbjct: 378 YLSDILTVPVNLAGIPAISVPCGKVQ-GMPVGLQVMGRPFEDERVVDVAYAYEQ 430 >gi|154175393|ref|YP_001407769.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter curvus 525.92] gi|166217655|sp|A7GX27|GATA_CAMC5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|112802512|gb|EAT99856.1| putative amidase [Campylobacter curvus 525.92] Length = 452 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 178/410 (43%), Positives = 257/410 (62%), Gaps = 11/410 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+PI IKD KG + S IL G+ Y +T +KL G+ NMDEFAMGS Sbjct: 49 EGVPIAIKDNIQIKGWSVTSGSKILQGYIAPYNATAIEKLLARNLAAFGRTNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S+YG ++P PGGSSGGS+AAVAG + A++G+DTGGSIRQPA+F Sbjct: 109 TTESSFYGHTLNPLNHA-----HVPGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KPTYGR SR G+ +++ SLDQ G I + V D+AIL IAG+DE D+T ++ Sbjct: 164 GCVGFKPTYGRVSRYGLAAYSSSLDQIGPIAQNVEDAAILYDIIAGHDEKDSTSADVAFS 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++ + + + + + Y ++ S K I LK+ G KIV +L ++Y + Sbjct: 224 SVADKINGE-RKLNICVIENY-VNNASEDTKKALNSAIDKLKNFGHKIVYKNLEDSKYDV 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYYII+ AEAS+NL+RYDGVRYG R E K++ E+Y N+RS GFG+EVK RI++GT+VLS Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGRRAEAKNLKELYVNSRSEGFGEEVKRRILLGTFVLS 341 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S YD++Y++A+K R IK + + ++ D+I P +PT+A G S + + Sbjct: 342 SGYYDAYYIKAQKARAHIKAQYEKILDEA-DLIFMPVSPTTAPKFGLM---SDPLQAYLS 397 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 D++T++VN+AGLPAISVP A + + + QLI + + E+TL + +E Sbjct: 398 DIYTISVNLAGLPAISVPIAKDGQNLNISAQLIAKAWDEQTLIDGAKSLE 447 >gi|317012641|gb|ADU83249.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori Lithuania75] Length = 453 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + + ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNLNRD-KRFKIAVLRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|195061969|ref|XP_001996108.1| GH13996 [Drosophila grimshawi] gi|193891900|gb|EDV90766.1| GH13996 [Drosophila grimshawi] Length = 508 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 185/475 (38%), Positives = 282/475 (59%), Gaps = 28/475 (5%) Query: 32 QAIENSNS--QMNAYIEVVAQKARAAAEESDKRI-----INGDARDLEGIPIGIKDCFAT 84 QA++++ + +NA+ + ++A AE+S +R I G L+GI I IKD F T Sbjct: 29 QALKDAKNLKTLNAFACLAPEQALQQAEDSTERYAQQKPIGG----LDGITIAIKDNFCT 84 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 + T S +L F P Y++TV +L GA++LGK NMD+FAMG+ S YGP + Sbjct: 85 SNLPTTCASRMLKDFVPPYDATVADRLRAAGAILLGKTNMDQFAMGAGTVDSIYGPTKNI 144 Query: 145 WRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 W S D + GGSSGGS++AVA LC A+IG+DTGGS R PAS+ G +G+KPTYG C Sbjct: 145 WSEDLSQDNWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVIGLKPTYGLC 204 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----LPVPDYERALD 258 SR G+I S+D GI+TR++ DS +L A+AG D D+T + L +P+ ++ Sbjct: 205 SRHGLIPLVNSMDVPGIVTRSISDSVEILNAVAGPDHLDSTTIQKSFKRLQLPEVDQI-- 262 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 ++ + +GIPKEY + L+ + +TW + L+ AGA + ++SLP+T ++ Y I++ Sbjct: 263 -DLRSLRIGIPKEYHCEGLTAEVLETWTKVADLLECAGAHVQQVSLPNTASSIFVYSILN 321 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 E +SN+ARYDG+ YG R E + E +Y +R+ GF Q VK RI+ G ++L + Y+ Sbjct: 322 QCEVASNMARYDGIEYGHRSEDERSTEQLYAQSRAEGFNQVVKTRILTGNFLLLRKNYEH 381 Query: 378 HYLRARKIRTLIKRDFTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YN 431 ++ +A ++R LI DF + F E VD++LTPTT + A PL K+ + + Sbjct: 382 YFEKALRVRRLIADDFAKVFKPSATEHKVDILLTPTTLSDA-PLYKDFASLSNRDQCAVQ 440 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D T NMAG+PA+S+P L + +PL LQL+ E+ L +V + IE + + Sbjct: 441 DFCTQPANMAGIPAVSLPVRLSKAGLPLSLQLMSNHLNEQLLLTVARWIEAQVEF 495 >gi|229584745|ref|YP_002843247.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus islandicus M.16.27] gi|228019795|gb|ACP55202.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus M.16.27] Length = 474 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 190/478 (39%), Positives = 289/478 (60%), Gaps = 23/478 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA--RAAAEESDKRIING 66 + E + L++K++ A E V+ + I + NA+I + +++ R E +K Sbjct: 2 IVELVNDLKNKNLEAEEYVERTYEKIGKYDKYTNAFITIRSKEEVLREVKENINK----- 56 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GI I IKD +TKGI T S +L+ + P Y++TV +KL GAV++GK NMDE Sbjct: 57 -AGKLAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATVIEKLKKEGAVIVGKTNMDE 115 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR Sbjct: 116 FAMGSTTETSYFGPTRNPWNL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGSIRA 170 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA++ T G+KP+YG SR G++++A SL+Q G + R D +L IAG D+ DAT + Sbjct: 171 PAAYNATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTL 230 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +L + ++E +Q+++ + +GI + L+ + + I L GA I + L + Sbjct: 231 DLSL-NFEFK-EQNVKSVRIGILSDI-LEMSEKPVSGVIKDVIDKLSSEGALIEDTKLGN 287 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIM 364 +YALPAYYII+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK RI+ Sbjct: 288 AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGIEVKRRIL 346 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G+++LS+ Y+ YL+A K+R LIK+ E F + D++++PT P +G+ N+ Sbjct: 347 LGSFILSAGYYEEFYLKALKVRNLIKKSLDELFTK-YDILVSPTMPILPPKIGEVINDPV 405 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M + D+ TV N+A +PA+S+PA +P+GLQL+G+ + L ++ IE+ Sbjct: 406 RMYAM--DLNTVIANLAAIPALSLPAGFY-NDLPIGLQLMGKYLSDIYLINISSYIER 460 >gi|328947310|ref|YP_004364647.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema succinifaciens DSM 2489] gi|328447634|gb|AEB13350.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema succinifaciens DSM 2489] Length = 501 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 185/498 (37%), Positives = 284/498 (57%), Gaps = 27/498 (5%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESD 60 + + + E+ + L+S + S+V LV + E NS +NA++E+ ++A E +D Sbjct: 1 MKYKTIRETVEALKSGETSSVALVKESKETFEADKNSALPLNAFLEIYDDILKSA-EAAD 59 Query: 61 KRIING----------DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK 110 ++I D + L GIP +KD + +G S IL+G+ Y +TV + Sbjct: 60 QKISEARSSGSLEKLFDEQPLLGIPFAVKDNISVRGKKLTCSSKILEGYVAPYSATVINR 119 Query: 111 LWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 L GA+ +G+ N DEFAMGSS E S YGP +P +D + GGSSGG +AAVA Sbjct: 120 LEKAGAIPIGRCNQDEFAMGSSTEYSVYGPTRNP---IDRA--YVSGGSSGGPAAAVAAN 174 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 ++GT+TGGS+R PAS+ G G+K TYG SR G++++ SLDQ GI+ T +D A+ Sbjct: 175 QALFALGTETGGSVRLPASYCGIYGLKTTYGVLSRWGVVAYGSSLDQVGILGHTPQDIAL 234 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGI 289 L ++G D D T +LP + + +PK++ ++ + K +++ Sbjct: 235 PLSVMSGVDFYDDTSADLPDAKPSVNAFSDFFKLKIAVPKQFLESKGMNADVAKVFEETR 294 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYE 348 W + GAKI + LP A+ +YY+I+ +EA+SNL+R+DG+RYG R++ GK E+Y Sbjct: 295 GWFESKGAKIEVVDLPILDAAIASYYVIALSEAASNLSRFDGIRYGNRIDNGKGYDELYV 354 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 +TRS GFG EVK RI+IG YVLS + Y + +R I+R+ + FEQ D+IL PT Sbjct: 355 DTRSNGFGPEVKRRIIIGNYVLSEQFSGDTYKKGMSVRARIQREIAKLFEQ-FDLILCPT 413 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA---ALCEKKMPLGLQLIG 465 PT AF LG++ ++ +M +D+FT VN+A +P++SVPA +L MP+G+Q G Sbjct: 414 CPTPAFKLGQKVDDPLAM--YLSDLFTTFVNLARIPSLSVPAGRTSLENGNMPVGIQFAG 471 Query: 466 QPFREETLFSVGQIIEKE 483 F E + + Q E E Sbjct: 472 PMFSEMKILEIAQAWENE 489 >gi|208434744|ref|YP_002266410.1| Glu-tRNA amido transferase, subunit A [Helicobacter pylori G27] gi|229485886|sp|B5Z7J5|GATA_HELPG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|208432673|gb|ACI27544.1| Glu-tRNA amido transferase, subunit A [Helicobacter pylori G27] Length = 453 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 275/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILKGYVAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNLNKD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASSEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L + +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDISYALEQE 447 >gi|260655064|ref|ZP_05860552.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Jonquetella anthropi E3_33 E1] gi|260630175|gb|EEX48369.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Jonquetella anthropi E3_33 E1] Length = 490 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 188/491 (38%), Positives = 282/491 (57%), Gaps = 24/491 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDK 61 +L + E D + + ++ ++V S IE ++A + + Q A Sbjct: 2 DLFRLTAREMLDGMAAGKFTSRQIVQSCFDRIEALEPTLHALLFINKTQALADADAADAA 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R L G+P+ +KD T + T S +L+ + P Y++TV + L GAV LGK Sbjct: 62 RQAGKPLGLLHGVPVILKDNLCTNDMPTTCASKMLEHYVPPYDATVVKLLRQAGAVFLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMDEFAMG S E S +GP +PW PGGSSGGS+AAVA ++G+DTG Sbjct: 122 ANMDEFAMGGSTENSAFGPTYNPWDP-----SRVPGGSSGGSAAAVAAGYAPLALGSDTG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIRQPASF G G+KPTYG+ SR G+ ++A SLDQ G RT D ++LL + +D Sbjct: 177 GSIRQPASFCGLFGMKPTYGQVSRYGLGAYASSLDQVGGFARTPEDLSLLLTVLCQFDPY 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGI---PKEYRLDYLSPTIDKTWQQGIS----WLKD 294 D+T P PD ++++G +G+ P++ ++ +ID + +S L D Sbjct: 237 DSTSAKRPAPDLSIRRPENLKGHKIGVLSLPED-----MASSIDVQVRSTLSDARKHLAD 291 Query: 295 AGAKIVEISLPHT-QYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRS 352 GA +V++SLP T +Y L YY+++PAEAS+NLARYDGVRYG V ++++Y TR Sbjct: 292 LGADVVDVSLPVTMKYGLACYYVLAPAEASANLARYDGVRYGSAAVGASSLIDLYTRTRG 351 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 FG EVK RI+ GTYVLSS YD++YL A+K+R +K +F +AF V+ +L PT+PT Sbjct: 352 RFFGPEVKRRILTGTYVLSSGFYDAYYLTAQKVRQKLKEEFAQAFSS-VEALLLPTSPTP 410 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A+ +G+ + + D+FT+ VN+AGLP ++ A + +P+GLQL+G + + Sbjct: 411 AYRIGEVTD---PVAMYMADLFTIPVNLAGLPGVTYTARFTDNGLPVGLQLVGAQWTDGK 467 Query: 473 LFSVGQIIEKE 483 L ++ ++ E Sbjct: 468 LLNLAALLGSE 478 >gi|313888278|ref|ZP_07821949.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845681|gb|EFR33071.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 483 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 171/473 (36%), Positives = 263/473 (55%), Gaps = 16/473 (3%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 R++D S E+ ++ I+ + ++NAYI V + A A+E D++ N + L GIP Sbjct: 16 RNRDFSCEEVTREFLDNIKEKDKEINAYITVTEELALKKAKEVDEKFHNREEMSPLAGIP 75 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I IKD + K + S +L+ + Y++T+ +K+ DN V+LGK+N+DEFAMG+S T Sbjct: 76 ISIKDNISVKNVKMTCGSRMLENYISPYDATLVKKIKDNDGVILGKVNLDEFAMGASTRT 135 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+G +P +D+T +S + + A SIG+DTGGS+RQP+SF TVG Sbjct: 136 SYFGVTKNP---LDTTRVSGGSSGGSAASVSAN--MAAISIGSDTGGSVRQPSSFCKTVG 190 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYG SR G+ S A + DQ G+I VRD I+ I G DE DAT V P +++ Sbjct: 191 MKPTYGSISRFGMASMANTFDQPGVIANDVRDLTIMFNVIEGRDERDATSVGNPGLNFDF 250 Query: 256 ALD----QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++++G IPK Y L+ + ++ I L++ GA++ E + + + Sbjct: 251 DFSDDAIKNLEGKKFAIPKTYLEMDLNERVRSELEKAIEILRENGAQVDEYDIKSLNHTI 310 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGK--DILEMYENTRSIGFGQEVKHRIMIGTYV 369 Y I+ E +SNLAR+D +RYG R + K I EMY +RS GFG EVK RIMIGT + Sbjct: 311 ETYNILVNGEIASNLARFDSIRYGHRTDKKFETIEEMYRASRSEGFGDEVKRRIMIGTNI 370 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS + Y +A K+R LIKRD F + D ++ PT P F + ++N + Sbjct: 371 LSMDNAEEFYYKALKVRGLIKRDMDRMF-KDYDFMICPTFPVLPFKI---DDNISPVEAY 426 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+FT+ NM G P+IS+P + + +G++ G+ F+++ L E+ Sbjct: 427 QADLFTIPANMVGSPSISLPMPAGQDGLSIGIEFTGKRFKDKNLLQASLAFER 479 >gi|169835566|ref|ZP_02868754.1| glutamyl-tRNA(Gln) amidotransferase subunit A [candidate division TM7 single-cell isolate TM7a] Length = 461 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 181/477 (37%), Positives = 274/477 (57%), Gaps = 20/477 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +++ + R+ AV +++ I+ E S S N ++ + +A A++ D I G Sbjct: 1 MNIADVKSRIAEN--GAVTEIETAIKKAEES-SGYNVFLHISKDRAIERAKKVDSGEIKG 57 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P +KD F T A S +L F +S ++L GA+ +G +N+D Sbjct: 58 S---LAGVPFAVKDNFLHFDGATTAASRLLSNFTAPLQSEAIERLESEGAICVGSVNLDS 114 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA G S E S +G ++DST GGSSGGS+ AVA + ++GTDTGGSIRQ Sbjct: 115 FAHGGSTENSAFGVT---KNAIDST--MVAGGSSGGSAVAVALDIVPFALGTDTGGSIRQ 169 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G VG KPTYG SR G+I+ A S D G+++ ++D+ ++ I+G D+ D T Sbjct: 170 PASFNGVVGFKPTYGTVSRYGVIAMASSTDTIGVLSSNIKDTESVMSIISGEDKKDMTT- 228 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +PD+ + + + +E+ + + + + I + +G I +ISLP Sbjct: 229 ---LPDFFAPKNIPNGKKKIAVIEEFITEGVDSGVRNVVENAIRVYEKSGYVIEKISLPM 285 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 +YAL YY++ PAE SSNL+RYDG+RYG R EG + E+Y TRS GF E K RIMI Sbjct: 286 IKYALAIYYVVIPAEISSNLSRYDGIRYGNRAEGLMGLEEVYAKTRSNGFMPENKRRIMI 345 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G YVLSS +D++Y +A+K RTL+ ++FT+A + D ++ P PT AF +G + ++ Sbjct: 346 GNYVLSSGYFDAYYQKAQKARTLLIKEFTKALDN-YDALIGPVAPTPAFKIGSKSSDPLM 404 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D+ TV ++AGLPAISVPA E MP+GLQLIG+ + + S+ +I+++ Sbjct: 405 M--YLEDIMTVPASLAGLPAISVPAGSSE-GMPVGLQLIGKQKDDANILSLARILKE 458 >gi|284165048|ref|YP_003403327.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Haloterrigena turkmenica DSM 5511] gi|284014703|gb|ADB60654.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Haloterrigena turkmenica DSM 5511] Length = 424 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 184/420 (43%), Positives = 264/420 (62%), Gaps = 14/420 (3%) Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +++RI D L G + +KD +T+G+ T S +L + P Y++TV ++L + GA + Sbjct: 8 TEERIEGTDDGPLSGTTVAVKDNISTEGVRTTCGSKMLAEYVPPYDATVVERLKEAGATI 67 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK NMDEF MG++NETSY+G V +P + PGGSSGGS+AAVA ++G+ Sbjct: 68 VGKANMDEFGMGTTNETSYFGSVDNP-----AAPGRVPGGSSGGSAAAVAAGEADVALGS 122 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA+F G VGIKPTYG SR G++++A SL+Q G TV D+A LL IAG Sbjct: 123 DTGGSVRCPAAFCGVVGIKPTYGLVSRYGLVAYANSLEQIGPFGETVEDAAQLLDVIAGD 182 Query: 239 DECDATCVNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 DE DAT LP+ + E D + + G+ +G+P E L+ + +T+ I+ L+D Sbjct: 183 DERDATTRELPLDEDETYADAATGDVDGLQIGVPTEL-LEGADEGVVETFWDAIAELEDR 241 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIG 354 GA+ E+SLP ++A+ AYY+I+ +EASSNLAR+DGVRYG + + + E + TR G Sbjct: 242 GAEYHEVSLPSVEHAVEAYYVIAMSEASSNLARFDGVRYGHSADAEGNWNETFARTREEG 301 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FG EVK RI++GTY LS+ +D +Y +A+ R +K+DF EA + DV+ +PT P F Sbjct: 302 FGDEVKRRILLGTYALSAGYHDKYYKKAQDARAWVKQDFDEALSE-ADVLASPTMPVPPF 360 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 LG+ ++ M D TV VN+A LPAISVPA + +P+GLQL+G F E L Sbjct: 361 ELGESLDDPLQM--YLADANTVPVNLADLPAISVPAGETD-GLPVGLQLVGPAFGERRLI 417 >gi|167005657|ref|ZP_02271415.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Campylobacter jejuni subsp. jejuni 81-176] Length = 431 Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 182/404 (45%), Positives = 256/404 (63%), Gaps = 12/404 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EG+P+ IKD + KG + S IL G+ Y+++ L NG G+ NMDEFAMGS Sbjct: 27 EGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLKANGFSPFGRCNMDEFAMGS 86 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +S YG ++P + PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 87 STASSCYGKTLNPLNF-----ERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 141 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T N+ Sbjct: 142 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEFI 201 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + + Y D S + + I LK G +IV +L +++ + Sbjct: 202 KTVPNLNAN-KKLKIAVIENYVNDADSE-VKNALLKTIDMLKANGHEIVYKNLLDSKFDI 259 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ EMY NTRS GFG+EVK RI++GT+VL Sbjct: 260 AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFVL 319 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 320 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDCDLIFMPVTPTTAF---KFDTQKSPMQTYL 375 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL Sbjct: 376 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLL 419 >gi|195569769|ref|XP_002102881.1| GD20138 [Drosophila simulans] gi|194198808|gb|EDX12384.1| GD20138 [Drosophila simulans] Length = 508 Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 179/460 (38%), Positives = 270/460 (58%), Gaps = 18/460 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + ++A A++S++R + DL+G+ I IKD F TK +HT S +L F Sbjct: 40 LNAFVRLTPEQAAQQAQDSEERYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W +D GG Sbjct: 100 VPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLDKDHWRIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYR 273 GI R+V D +L +AG D+ D+T + P +P+ + + + +GIPKEY Sbjct: 220 GIFARSVSDCVAILNTVAGPDKLDSTTIRKPFTRLNLPEVGQI---DLSTVRIGIPKEYH 276 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LS + +TW + L+ +GA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 277 CHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIE 336 Query: 334 YGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R + + ++Y +R+ GF + VK RI+ G ++L + YD ++ +A ++R LI D Sbjct: 337 YGHRAADERSTEQLYALSRAEGFNEVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAED 396 Query: 393 FTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAI 446 F + F E+ VD++LTPTT T A PL K+ + + D T NMAG PA+ Sbjct: 397 FAKVFDSSAKEERVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPANMAGNPAV 455 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 S+P L +PL LQL+ E+ L +V + IE + + Sbjct: 456 SIPIRLSRAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|254779197|ref|YP_003057302.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori B38] gi|254001108|emb|CAX29063.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Helicobacter pylori B38] Length = 453 Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 188/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYIAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLRELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PT+A N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTTAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|317011051|gb|ADU84798.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori SouthAfrica7] Length = 453 Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYCASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNRE-RRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|227827542|ref|YP_002829322.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus islandicus M.14.25] gi|238619699|ref|YP_002914525.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus islandicus M.16.4] gi|227459338|gb|ACP38024.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus M.14.25] gi|238380769|gb|ACR41857.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus M.16.4] Length = 474 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 189/476 (39%), Positives = 288/476 (60%), Gaps = 19/476 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + L++K++ A E V+ + I + NA+I + +++ K IN Sbjct: 2 IVELVNDLKNKNLEAEEYVERTYEKIGKYDKYTNAFITI---RSKEEILREVKENINKGG 58 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L GI I IKD +TKGI T S +L+ + P Y++TV +KL GAV++GK NMDEFA Sbjct: 59 K-LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATVIEKLKKEGAVIVGKTNMDEFA 117 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR PA Sbjct: 118 MGSTTETSYFGPTRNPWNL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPA 172 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ T G+KP+YG SR G++++A SL+Q G + R D +L IAG D+ DAT ++L Sbjct: 173 AYNATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTLDL 232 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + ++E +Q+++ + +GI + L+ + + I L GA I + L + + Sbjct: 233 SL-NFEFK-EQNVKSVRIGILSDI-LEMSEKPVSGVIKDVIDKLSSEGALIEDTKLGNAE 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 YALPAYYII+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK RI++G Sbjct: 290 YALPAYYIIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGIEVKRRILLG 348 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +++LS+ Y+ YL+A K+R LIK+ E F + D++++PT P +G+ N+ M Sbjct: 349 SFILSAGYYEEFYLKALKVRNLIKKSLDELFTK-YDILVSPTMPILPPKIGEVINDPVRM 407 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ TV N+A +PA+S+PA +P+GLQL+G+ + L ++ IE+ Sbjct: 408 YAM--DLNTVIANLAAIPALSLPAGFY-NDLPIGLQLMGKYLSDIYLINISSYIER 460 >gi|24648113|ref|NP_650775.2| glutamyl-tRNA amidotransferase subunit A [Drosophila melanogaster] gi|74868575|sp|Q9VE09|GATA_DROME RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A homolog gi|7300468|gb|AAF55624.1| glutamyl-tRNA amidotransferase subunit A [Drosophila melanogaster] Length = 508 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 178/460 (38%), Positives = 271/460 (58%), Gaps = 18/460 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + ++A A+++++R + DL+G+ I IKD F TK +HT S +L F Sbjct: 40 LNAFVRLTPEQAGQQAQDAEQRYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W + D + GG Sbjct: 100 VPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYR 273 GI R+V D +L +AG D+ D+T + P +P+ + + + +GIPKEY Sbjct: 220 GIFARSVSDCVAVLNTVAGPDKLDSTTIRQPFTRLHLPEVGQI---DLSTVRIGIPKEYH 276 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LS + +TW + L+ +GA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 277 CHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIE 336 Query: 334 YGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R + + ++Y +R+ GF VK RI+ G ++L + YD ++ +A ++R LI D Sbjct: 337 YGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAED 396 Query: 393 FTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAI 446 F F E+ VD++LTPTT T A PL K+ + + D T NMAG+PA+ Sbjct: 397 FARVFDSSAKEERVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPANMAGIPAV 455 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 S+P L + +PL LQL+ E+ L +V + IE + + Sbjct: 456 SIPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|308184617|ref|YP_003928750.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori SJM180] gi|308060537|gb|ADO02433.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori SJM180] Length = 453 Score = 299 bits (765), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 187/454 (41%), Positives = 276/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + + ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNLNRD-KRFKIAVLRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK+ G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PTSA N S +Y +D++T+ N++GLPA+++P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTSAHLF----NYHASPLEMYLSDIYTIGANLSGLPALALP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L V +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|16769884|gb|AAL29161.1| SD08002p [Drosophila melanogaster] Length = 508 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 178/460 (38%), Positives = 270/460 (58%), Gaps = 18/460 (3%) Query: 41 MNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA++ + ++A A+++++R + DL+G+ I IKD F TK +HT S +L F Sbjct: 40 LNAFVRLTPEQAGQQAQDAEQRYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDF 99 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGG 158 P Y++TV +L GAV+LGK NMD+FAMG+ S YGP + W + D + GG Sbjct: 100 VPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRIAGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS++AVA LC A+IG+DTGGS R PAS+ G VG+KPTYG SR G+I S+D Sbjct: 160 SSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVP 219 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYR 273 GI R+V D +L +AG D+ D+T + P +P+ + + + +GIPKEY Sbjct: 220 GIFARSVSDCVAVLNTVAGPDKLDSTTIRQPFTRLHLPEVGQI---DLSTVRIGIPKEYH 276 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LS + +TW + L+ +GA + ++SLP+T ++ Y I++ E +SN+ARYDG+ Sbjct: 277 CHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIE 336 Query: 334 YGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R + + ++Y +R+ GF VK RI+ G ++L + YD ++ +A ++R LI D Sbjct: 337 YGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAED 396 Query: 393 FTEAF-----EQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-YNDVFTVAVNMAGLPAI 446 F F E+ VD++LTPTT T A PL K+ + + D T NMAG+PA+ Sbjct: 397 FARVFDSSAKEERVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPANMAGIPAV 455 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 S+P L +PL LQL+ E+ L +V + IE + + Sbjct: 456 SIPIRLSRAGLPLSLQLMSNSLNEQLLLTVARWIEAQVEF 495 >gi|229582205|ref|YP_002840604.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus islandicus Y.N.15.51] gi|228012921|gb|ACP48682.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus islandicus Y.N.15.51] Length = 474 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 187/476 (39%), Positives = 288/476 (60%), Gaps = 19/476 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + L++K++ A E V+ + I + NA+I + +++ K IN Sbjct: 2 IVELVNDLKNKNLEAEEYVERTYEKIGKYDKYTNAFITI---RSKEEVLREVKENINKGG 58 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L GI I IKD +TKGI S +L+ + P Y++TV +KL GAV++GK NMDEFA Sbjct: 59 K-LAGILIAIKDNISTKGIRATCASKMLEDYIPPYDATVIEKLKKEGAVIVGKTNMDEFA 117 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR PA Sbjct: 118 MGSTTETSYFGPTRNPWNL-----ERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPA 172 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ T G+KP+YG SR G++++A SL+Q G + R D +L IAG D+ DAT ++L Sbjct: 173 AYNATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTIDL 232 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + ++E +Q+++ + +GI + L+ + + I L GA I + L + + Sbjct: 233 SL-NFEFK-EQNVKSVRIGILSDI-LEMSEKPVSGVIKDVIDKLSSEGALIEDTKLGNAE 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIG 366 YALPAYYII+ +EASSNLARYDGVRYG +EG + E+Y R FG EVK RI++G Sbjct: 290 YALPAYYIIAMSEASSNLARYDGVRYGYSKYMEG-NWREVYAKNRGEAFGIEVKRRILLG 348 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +++LS+ Y+ YL+A K++ LIK+ E F++ D++++PT P +G+ N+ M Sbjct: 349 SFILSAGYYEEFYLKALKVKNLIKKSLDELFKK-YDILVSPTMPILPPKIGEVINDPVRM 407 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ TV N+A +PA+S+PA +P+GLQL+G+ + L ++ IE+ Sbjct: 408 YAM--DLNTVIANLAAIPALSLPAGFY-NDLPIGLQLMGKYLSDIYLINISSYIER 460 >gi|305431910|ref|ZP_07401077.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter coli JV20] gi|304444994|gb|EFM37640.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter coli JV20] Length = 454 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 181/412 (43%), Positives = 256/412 (62%), Gaps = 12/412 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EGIPI IKD + K S IL G+ Y++T + L G G+ NMDEFAMGS Sbjct: 49 EGIPIAIKDNISVKDWELTCASKILQGYVAPYDATAIKNLRSKGFSPYGRTNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S+ TS+YG ++P PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 SSATSFYGKTLNPLNFAR-----VPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T + Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSAKVDFT 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + Y ++ S + + I LK G +IV ++ +++ + Sbjct: 224 PTAPNLNAE-KKLRIAVIENY-VNEASAEVKAALLKSIEMLKANGHEIVYKNMLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R + +++ +MY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSQNAENLKDMYINTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + M Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDADLIFMPVTPTTAF---KFDTQKSPMQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DV+T++VN+AGL ISVP ++ + + QLI + F E+TL +EK Sbjct: 398 EDVYTISVNLAGLGGISVPVGKDKEGLNISAQLICKAFDEQTLLDGALSLEK 449 >gi|109947725|ref|YP_664953.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter acinonychis str. Sheeba] gi|122973258|sp|Q17WM2|GATA_HELAH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|109714946|emb|CAJ99954.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Helicobacter acinonychis str. Sheeba] Length = 453 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 183/414 (44%), Positives = 263/414 (63%), Gaps = 14/414 (3%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +G+PI IKD + KG S IL+G+ Y ++V + L N G NMDEFAMGS Sbjct: 46 KGVPILIKDNISVKGWEITCSSKILEGYVAPYHASVIENLHQNSMAGFGLSNMDEFAMGS 105 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + E+S YG +P PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ Sbjct: 106 TTESSCYGITKNP-----RDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYC 160 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G+I++ S DQ G IT+ V D++IL AI+G+D D+T NL Sbjct: 161 GCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPT 220 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + L++ + + + +++ D S + ++ + LK+ G +IVE + + Y + Sbjct: 221 QTFKNLNRE-RRFKIAVLRDHIKD-ASNEVQLAYENTLKALKEIGHEIVEKKILDSHYQI 278 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 YYIIS AEASSNLAR+DGVRYG R + KD+ E+Y +RS GFG EVK RIM+G +VL Sbjct: 279 SIYYIISMAEASSNLARFDGVRYGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVL 338 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++YL+A+++R +IK + + FE+ VD+I TP PT+A PL N S +Y Sbjct: 339 SSGYYDAYYLKAQQMRLMIKEQYNKIFEE-VDLIFTPVAPTTA-PLF---NYHASPLEMY 393 Query: 431 -NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +D++T+ N++GLPA+S+P A +P+G+Q I + F E++L V +E+E Sbjct: 394 LSDIYTIGANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 447 >gi|88602304|ref|YP_502482.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanospirillum hungatei JF-1] gi|109891956|sp|Q2FQM9|GATA_METHJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|88187766|gb|ABD40763.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanospirillum hungatei JF-1] Length = 431 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 180/415 (43%), Positives = 254/415 (61%), Gaps = 18/415 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ + +KD +TKGI T S IL G+ P Y++ V L + GA ++GK NMDEF MG Sbjct: 29 LSGVTVAVKDNISTKGIETTCASKILKGYIPPYDAHVVTLLKNAGAAIVGKTNMDEFGMG 88 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ E S YGP ++P + PGGSSGGS+AAVA L +IG+DTGGSIR PA+F Sbjct: 89 TTTENSAYGPTLNPLDH-----QRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAF 143 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+I++A SL+Q G + R V+ + L IAG+D DAT V+ P Sbjct: 144 CGIVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVIAGHDSRDATSVDKP- 202 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y+ I G+ +G+P E+ + ++P + + +Q I L+ GA V ++P +YA Sbjct: 203 --YKHNPVSDITGLKIGVPDEFFGEGVNPNVAEVVRQAIDTLESMGATAVPCTIPSMKYA 260 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYV 369 L AYY+ +EASSNLAR+DGVRYG V K + Y R GFG+EV+ RI++GT+ Sbjct: 261 LSAYYVTCTSEASSNLARFDGVRYGPAVGTLKSWHDAYSEQRKAGFGKEVRRRIILGTFS 320 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L++ Y +Y +A+ R +++ DF F VDVI PT P AF LG++ S + Sbjct: 321 LAAGYYGRYYQKAQTARQMVRDDFERIFRD-VDVIAGPTMPDIAFKLGEK---SDPLQMY 376 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIEK 482 +D+ TV N+AG+PA+SVP C K MP+GLQLIG+ F +E + E+ Sbjct: 377 LSDILTVPANLAGVPALSVP---CGKINSMPVGLQLIGRYFEDERIIDTAYAYEQ 428 >gi|332797085|ref|YP_004458585.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Acidianus hospitalis W1] gi|332694820|gb|AEE94287.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidianus hospitalis W1] Length = 472 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 191/477 (40%), Positives = 285/477 (59%), Gaps = 21/477 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKRIINGD 67 +S+ + L++ ++ E V + I + ++NA+I + ++ + +ES KR Sbjct: 2 ISKLVEDLKNGNLDPEEYVAKTFERINKLDKKINAFITLRDEEEVKKEVKESIKR----- 56 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+ I +KD +TKGI T S +L + P Y++TV +KL + GAV+LGK NMDEF Sbjct: 57 GGKLAGVLIAVKDVISTKGIRTTCASKMLSDYIPPYDATVIEKLKNEGAVILGKTNMDEF 116 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGS+ ETSY+GP +PW + TPGGSSGGS AA+A ++G+DTGGSIR P Sbjct: 117 AMGSTTETSYFGPTRNPWDL-----ERTPGGSSGGSGAALAAGYVDLALGSDTGGSIRAP 171 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+FT T G+KP+YG SR G+I++A SL+Q G + + D +L IAG D+ DAT + Sbjct: 172 AAFTATFGLKPSYGTVSRYGLIAYANSLEQIGPMAKNAEDLGLLYSIIAGEDDKDATTIK 231 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 V + + I+G+ +G+ + L+ ++ + I L GA I E L + Sbjct: 232 YSVDNPPGEI--PIKGIKIGVLSDI-LEMSDKSVVNVIRTAIDKLSSEGAIIEETKLGYA 288 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +YALPAYYII+ +EASSNLARYDGVRYG EG + +E + R GFG EVK RI++ Sbjct: 289 EYALPAYYIIAMSEASSNLARYDGVRYGYSKHFEG-NWIETFSKNRGEGFGMEVKRRILL 347 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+++LS+ Y+ +Y++A K+R LIK + F + DV+L+PT P +G+ N+ Sbjct: 348 GSFILSAGYYEEYYIKALKVRRLIKNSLDQLFSK-YDVLLSPTMPVLPPKIGEVINDPIK 406 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M + DV TV N+A +PAIS+PA +P+GLQ++G+ + L + IEK Sbjct: 407 MYAM--DVNTVIANLAAIPAISIPAGFYN-NLPVGLQMMGRYLSDTMLIGISINIEK 460 >gi|161528377|ref|YP_001582203.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Nitrosopumilus maritimus SCM1] gi|160339678|gb|ABX12765.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Nitrosopumilus maritimus SCM1] Length = 481 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 182/471 (38%), Positives = 278/471 (59%), Gaps = 14/471 (2%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EG 73 +++ +ISA + + ++ I + + +++A++ V A A E DK+I +GD + G Sbjct: 13 EVQNGNISAEDFTAATLEHIHSVDEKLHAFLSV-NDDAINQAREIDKKIKSGDKVGVCFG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD K T S +L+ F Y++TV KL + A+ +GK NMDEFAMG + Sbjct: 72 MPISIKDNMCIKNSKTTCASKMLENFVAPYDATVISKLKEQDAIFIGKANMDEFAMGLTT 131 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S YGP +PW ++D T PGGSSGGS+ +V+ F C AS+G+DTGGS+R PASF Sbjct: 132 EFSAYGPSKNPW-NVDCT----PGGSSGGSAVSVSAFECVASLGSDTGGSVRNPASFCSA 186 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KPTYG SR G+IS+A S++Q G +TRTV+D+A LL I G D D T V+ DY Sbjct: 187 VGYKPTYGLISRYGLISYANSIEQIGPVTRTVKDTAFLLNMITGLDPNDNTTVDNKSEDY 246 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +D ++G +GI KE + P + + IS L+ GA E+SL +Y++ A Sbjct: 247 LSGIDSGVEGKKIGIIKEMMAEGTDPAVVSATKDAISKLEGLGAICEEVSLDMVKYSVAA 306 Query: 314 YYIISPAEASSNLARYDGVRYG--LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY I+ EA SNLARYD +RYG VEG + + R FG EV R++IG +V S Sbjct: 307 YYTITATEAGSNLARYDNLRYGYDFSVEGYEFNSYIQKARK-NFGPEVTRRMIIGGFVPS 365 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + ++L+A K++ + ++ +AF++ D+++ PT P F LG++ ++ ++ + Sbjct: 366 AGHAGKYFLKALKVKNKLTKEINDAFKK-YDLLIAPTVPILPFKLGEKIDDPVALFLV-- 422 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D+ TV N+ G PAISVP A+ +P+G+QL+ ++ L Q +E+ Sbjct: 423 DINTVTANLTGKPAISVPFAV-SNGLPIGIQLLADSMNDKMLLQAAQALEQ 472 >gi|57167940|ref|ZP_00367079.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Campylobacter coli RM2228] gi|57020314|gb|EAL56983.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Campylobacter coli RM2228] Length = 454 Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 180/412 (43%), Positives = 257/412 (62%), Gaps = 12/412 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 EGIPI IKD + K S IL G+ Y++T + L G G+ NMDEFAMGS Sbjct: 49 EGIPIAIKDNISVKDWELTCASKILQGYVAPYDATAIKNLRSKGFSPYGRTNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S+ TS+YG ++P PGGSSGGS+AAVAG L AS+G+DTGGS+RQPA+F Sbjct: 109 SSATSFYGKTLNPLNFAR-----VPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ S++ SLDQ G++T+ V D+AIL AIAGYD+ D+T + Sbjct: 164 GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSAKVDFT 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + Y ++ S + + I LK G +IV ++ +++ + Sbjct: 224 PTAPNLNAE-KKLRIAVIENY-VNEASAEVKAALLKSIEMLKANGHEIVYKNMLDSKFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R + +++ +MY NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGKRSQNAENLKDMYINTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF K + + Sbjct: 342 SSGYYDAYYIKAQKARAFIKAKYEEIL-QDADLIFMPVTPTTAF---KFDTQKSPIQTYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 DV+T++VN+AGL ISVP A ++ + + QLI + + E+TL +EK Sbjct: 398 EDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEK 449 >gi|255322408|ref|ZP_05363554.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter showae RM3277] gi|255300781|gb|EET80052.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter showae RM3277] Length = 452 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 175/402 (43%), Positives = 255/402 (63%), Gaps = 11/402 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD KG S IL G+ Y +TV +KL G G+ NMDEFAMGS+ Sbjct: 50 GVPIAIKDNIQVKGWSVTCASKILQGYVAPYNATVVEKLLAAGLAPFGRTNMDEFAMGST 109 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+SYYG ++P + GGSSGGS+AAV L A++G+DTGGSIRQPA+F G Sbjct: 110 TESSYYGKTLNPLNR-----ERVAGGSSGGSAAAVGAGLAVAALGSDTGGSIRQPAAFCG 164 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR G+ +++ SLDQ G IT+ V D+AIL IAG+D+ D+T ++ Sbjct: 165 CVGLKPTYGRVSRYGLGAYSSSLDQIGPITQNVEDAAILYDIIAGHDDKDSTSADIKFES 224 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L+ + +T+ + + Y ++ S K + + LK AG KI+ +L +++ + Sbjct: 225 VADKLNAD-KKLTICVIENY-INEASEEAKKALLKAVDVLKAAGHKIIYKNLENSKCDIA 282 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YYII+ AEAS+NL+RYDGVRYG R E K++ E+Y N+RS GFG+EVK RI++GT+VLSS Sbjct: 283 TYYIIATAEASANLSRYDGVRYGRRAEAKNLKELYINSRSEGFGEEVKKRILLGTFVLSS 342 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 YD++Y++A+K R K + + + D+IL P P++A+ G+ +N + +D Sbjct: 343 GYYDAYYIKAQKARAHTKAKYEQILSE-CDLILMPVAPSTAYKFGELKN---PLDSYLSD 398 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++T++VN+AGLPAISVP A + + QLI + + E+TL Sbjct: 399 IYTISVNLAGLPAISVPVAKDADGLNVSAQLIAKAWDEKTLL 440 >gi|305663461|ref|YP_003859749.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ignisphaera aggregans DSM 17230] gi|304378030|gb|ADM27869.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ignisphaera aggregans DSM 17230] Length = 489 Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 188/472 (39%), Positives = 283/472 (59%), Gaps = 24/472 (5%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVA-QKARAAAEESDKRIINGDARDLE---GIPIGIKD 80 E V++ I+ + +++ AYI ++ ++ AEE KR D+R L GI I +KD Sbjct: 25 EYVEAIYDRIDRAENKVRAYITIIPREETLRYAEELVKRF--RDSRVLPPLFGIAIAVKD 82 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 +TKGI T S +L+ + P Y++TV +++ G +++GK NMDEFAMGS+ ETS + P Sbjct: 83 NISTKGIRTTCASKMLENYIPPYDATVIERIKAAGGIIIGKTNMDEFAMGSTTETSAFYP 142 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +PW S PGGSSGGS+AA+ + ++G+DTGGSIR PA+FT T G+KPTY Sbjct: 143 TRNPWDLERS-----PGGSSGGSAAALVAGETSLALGSDTGGSIRNPAAFTATYGLKPTY 197 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 G SR G+I++ SLDQ G + R RD AILL I+GYDE D+T + + +Y +D+ Sbjct: 198 GLVSRYGLIAYGSSLDQIGPMARNTRDLAILLNIISGYDERDSTSILIQKQNYVELMDRL 257 Query: 261 IQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYI 316 I + +GI KE + ++ + + L G I E +S+P+T+ + AYYI Sbjct: 258 IYDEPKLRIGIIKEL-FEGSEDSVKSIAYKAVDKL--CGYHICEELSIPYTRQIVAAYYI 314 Query: 317 ISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I+ AEASSNLARYDG+RYGLR VE +D +++Y + R+ GFG EVK RI +G YVLS Sbjct: 315 IAMAEASSNLARYDGIRYGLRKSVENRDWIDVYSDVRTEGFGYEVKKRIALGAYVLSIGY 374 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 + +Y+RA + R +++ F E F++ D +++PT P LG+ + M +D+ Sbjct: 375 REMYYIRALRFRRMLRDKFNEIFKR-FDAVVSPTMPILPPRLGEFIEDPIKM--YLSDIN 431 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 TV N+ G PAIS+P ++P+GLQ++ +P E + + +E GY Sbjct: 432 TVIANLIGAPAISIPIGFS-NRLPVGLQIMSKPLNEPIILYLSNQLENAIGY 482 >gi|251773025|gb|EES53581.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Leptospirillum ferrodiazotrophum] Length = 501 Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 174/414 (42%), Positives = 248/414 (59%), Gaps = 10/414 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G P+ IKD + + T S IL+G+R +T +L G ++LGK N+DEFAMG Sbjct: 71 LTGYPLMIKDNLEVRDMPTTCASRILEGYRSLRTATAVSRLLSLGTIILGKTNLDEFAMG 130 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS E S +GP +PW SSGGS+AAVA L S+G+DTGGSIRQPA+F Sbjct: 131 SSTENSAFGPTRNPWDPSRVPGG-----SSGGSAAAVAAGLAPLSLGSDTGGSIRQPAAF 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G +G+KPTYGR SR G+++FA SLDQ G D+ L A++G D D T Sbjct: 186 CGVIGVKPTYGRISRSGLVAFASSLDQIGPFAVEAEDALEALVAMSGADPLDMTTEGRDP 245 Query: 251 PDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + R Q S+ G+ +GIP + L +I + L G + EI L H Sbjct: 246 EEMRRDFTQTSLSGLRLGIPAALFGEGLDNSIRERLADVRKGLSFDGVREEEIELAHAAM 305 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTY 368 + YY+++ +EA+SNL R+DGVRYG R G ++ EMYE TR GFG EVK RI++GT+ Sbjct: 306 GINVYYVLATSEAASNLCRFDGVRYGFRAAGSANLREMYEETRDKGFGLEVKRRILLGTF 365 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ ++ Y +ARK++ LI+++F +AF + DVI+TPT+PT AF G++ + SM Sbjct: 366 ALSAGYQEAFYRKARKVQALIRQEFLDAFSR-CDVIMTPTSPTPAFSFGEKTGDPLSM-- 422 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +D++T+ N+AGLPA+SVPA + +P+G+ LIG P+ E L +V + I + Sbjct: 423 YLSDIYTITANLAGLPALSVPAGVDADGLPVGVHLIGPPWSEGRLLAVAREISR 476 >gi|15834891|ref|NP_296650.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia muridarum Nigg] gi|270285060|ref|ZP_06194454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia muridarum Nigg] gi|270289085|ref|ZP_06195387.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia muridarum Weiss] gi|301336456|ref|ZP_07224658.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydia muridarum MopnTet14] gi|13878519|sp|Q9PL37|GATA_CHLMU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|7190311|gb|AAF39139.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlamydia muridarum Nigg] Length = 491 Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 176/469 (37%), Positives = 279/469 (59%), Gaps = 13/469 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E RD + +++IS + + + IE+ + Q+ +++ + ++A A D ++ GD Sbjct: 8 ELRDAVVNREISVTAITEYFYHRIESYDEQIGSFLSLCKERALLRASRIDDKLAKGDPIG 67 Query: 71 -LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIPIG+KD G+ T S +L+ F +++TV +++ ++LGKLNMDEFAM Sbjct: 68 ILAGIPIGVKDNIHITGVKTTCASKMLENFVAPFDATVVRRIEMEDGILLGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ S + +PW + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+ Sbjct: 128 GSTTRYSAFQHTNNPWDL-----ERVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G +T V D A+ + A AG D DAT + Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDAFAGRDIKDATTRDFF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + +AL + + +G+P+ + LD L + + + ++ ++ G++I++I L ++ Sbjct: 243 RGTFSQALSLEVPKL-IGVPRGF-LDGLQEDCKENFFEALAVMERQGSRIIDIDLSVLKH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+P YYI++ AEA++NLAR+DGVRYG R + ++ EMY +R GFG+EV RI++G Y Sbjct: 301 AVPVYYIVASAEAATNLARFDGVRYGHRCAQADNMQEMYARSRKEGFGKEVTRRILLGNY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ + Y + +R + F AFE DVI P A P ++ + + Sbjct: 361 VLSAERQNIFYKKGTAVRATLIEAFQSAFE-CCDVI---AMPVCASPAIRDTDVLDPVSL 416 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 D++TVAVN+A LPAISVP+ L ++ +PLG+Q IG+ ++ + VG Sbjct: 417 YLQDIYTVAVNLAYLPAISVPSGLSKEGLPLGVQFIGKRGADQQICQVG 465 >gi|57242159|ref|ZP_00370099.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Campylobacter upsaliensis RM3195] gi|57017351|gb|EAL54132.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Campylobacter upsaliensis RM3195] Length = 453 Score = 296 bits (757), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 177/412 (42%), Positives = 259/412 (62%), Gaps = 12/412 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +GIP+ IKD + K S IL G+ Y++T L NG G+ NMDEFAMGS Sbjct: 49 QGIPVAIKDNISVKNWELTCGSKILQGYVAPYDATAIVNLKKNGFSPFGRTNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S TS+YG ++P +D + PGGSSGGS+AAV L AS+G+DTGGS+RQPA+F Sbjct: 109 STATSFYGRTLNP---LDFSR--VPGGSSGGSAAAVVANLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ +++ SLDQ G++T+ V D+A+L AIAG+DE D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLAAYSSSLDQIGVLTQNVEDAALLYDAIAGHDEKDSTSANVSFE 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ +++ + + + + Y ++ S + T + I LK G +IV +L ++ + Sbjct: 224 PTSDKLNTNVK-LKIAVIENY-INATSEEVKNTLLKSIEALKAHGHEIVYRTLQDYEFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ ++Y NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGRRSEHCENLKDLYINTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF +++ M Sbjct: 342 SSGYYDAYYIKAQKARAYIKAKYEEIL-QDCDLIFMPVTPTTAFAFDAQKS---PMQSYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++T++VN+AGL ISVP + + + QLI + E+TL + +EK Sbjct: 398 EDIYTISVNLAGLGGISVPVGKDKDGLNISAQLICGAYDEQTLLNGALNLEK 449 >gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] Length = 1134 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 185/509 (36%), Positives = 288/509 (56%), Gaps = 38/509 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI------EVVAQKARAAAEESDKR 62 ++++R L ++++ +++L++ + ++ ++ AY+ E + ++A A A+ SD R Sbjct: 27 IADARRALDAREVDSMDLLEYSARRVDLDDALARAYVGGGKSRETILRRAVADAQMSDAR 86 Query: 63 I----INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 N L+G+P KD T+A S +L G+ EST Q++ +G ++ Sbjct: 87 REAKETNAKTNALDGVPFAAKDNLCASVGTTEAGSRMLRGYESVIESTAIQRIRASGGIL 146 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK NMDEF MGS TS G +P S D A A +G+ Sbjct: 147 VGKTNMDEFGMGSHTRTSSSGTTTNPAYS-DGARSAGGSSGGSAVVVANGSVPFA--LGS 203 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA++ G VG+KPTYGR SR G+IS+ SLD G++ RTV D+ ++L A+ G Sbjct: 204 DTGGSVRLPAAYCGVVGLKPTYGRVSRFGLISYCSSLDTVGVLARTVSDAGVVLAAMQGE 263 Query: 239 DECDAT----CVNL-PVPDYERALDQS-------IQGMTVGIPKEYRLDYLSPTIDKTWQ 286 D D+T C +L + E A+ + ++G+ VG+P+EY + L+ + W Sbjct: 264 DGLDSTTVARCEDLDATAEREFAIRAASEDGSFPMKGVRVGVPEEYAVKELTQEVYDAWD 323 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG-LRVE------ 339 + + ++ GA++V ++LPHT+YALP YYII+P+EA SNLARYDG+RYG L+ + Sbjct: 324 ETVRAMEALGAEVVRVTLPHTKYALPCYYIIAPSEALSNLARYDGMRYGDLKADLSREEY 383 Query: 340 -GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 +D RSIGFG EV+ RI +G + LSS ++ +A+++R L+ DFT AFE Sbjct: 384 LKEDFQTAIAKARSIGFGPEVRRRITVGAFALSSERAAEYFEKAQRVRRLVSNDFTTAFE 443 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCE-KK 456 VD++LTP++ ++A L E+ S S Y DV TV ++AGLPA+SVPA Sbjct: 444 H-VDLLLTPSSVSTAPKL--EDLESLSPAQTYAADVMTVPASLAGLPAMSVPAGRSRVSG 500 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +P+G+Q I FRE +L VG +E+ G Sbjct: 501 LPIGMQFIAPKFREASLVRVGARLERAGG 529 >gi|62184918|ref|YP_219703.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila abortus S26/3] gi|81312909|sp|Q5L6I9|GATA_CHLAB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|62147985|emb|CAH63736.1| glutamyl-tRNA amidotransferase subunit A [Chlamydophila abortus S26/3] Length = 491 Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 178/478 (37%), Positives = 283/478 (59%), Gaps = 15/478 (3%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR- 69 E R+ + S + SA + + I+ ++Q+ A++ + ++A A D ++ G+ Sbjct: 8 ELRNAVVSGESSATAIAKYFYNRIKTEDNQIGAFLSLCEERAYEKAAIIDAKVARGEPLG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PIGIKD +G+ T S +L+ + +++TV +++ V+LGKLNMDEFAM Sbjct: 68 KLAGVPIGIKDNIHIRGLRTTCASKMLENYIAPFDATVVERIEAEDGVILGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ + S + P +PW PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+ Sbjct: 128 GSTTQYSAFHPTKNPWGL-----SCVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G +T V D A+ + AG D+ DAT Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDVFAGKDDRDATSQKFF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ AL + + +G+P + LD L + + + +S L+ G++IVE+ L + Sbjct: 243 TGSFQEALSLDVPSL-IGVPMGF-LDGLRDDVKENFFASLSILERQGSRIVEVDLNILDH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ YYI++ AEA++NLAR+DG+RYG R E I ++Y +R GFG+EV RI++G Y Sbjct: 301 AVSVYYIVASAEAATNLARFDGIRYGYRSPEAHSIEDIYTISRVQGFGKEVMRRILLGNY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ + +Y + IR I + F +A+E+ DVI P AF G+ + + Sbjct: 361 VLSTERQNVYYKKGSAIRAKIIQAFQKAYEK-CDVIAMPVCSCPAFADGEILDPT----S 415 Query: 429 IY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +Y D++TVA+N+A LPAI+VP+ + +PLG Q+IGQ +++ + VG ++ +G Sbjct: 416 LYLQDIYTVAMNLAYLPAIAVPSGFSREGLPLGFQVIGQKGKDQQVCQVGYSFQEHSG 473 >gi|28572510|ref|NP_789290.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Tropheryma whipplei TW08/27] gi|28410642|emb|CAD67028.1| glutamyl-tRNA (gln) amidotransferase subunit A [Tropheryma whipplei TW08/27] Length = 493 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 191/477 (40%), Positives = 281/477 (58%), Gaps = 20/477 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RSK++SA+E+ +S+I IE S+S++ A++ R A D+ + + L G+ Sbjct: 14 IRSKEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATKLSPLAGV 73 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T+ + T A S IL+G+ P Y +TV +++ +LGK N DEF MGSS E Sbjct: 74 PIAVKDMILTRDMPTTAGSKILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTE 133 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y +PW T GGS GGSSAAV+ ++GTDTGGSIR PA TGTV Sbjct: 134 YSAYKTTRNPWDL-----SRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTV 188 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GI+PTYG SR G+I+ A S DQ G + + D+A+L + IAGYD DA + ++ Sbjct: 189 GIRPTYGSVSRYGVIALASSFDQVGPCSSNILDAALLHEVIAGYDPADAVSIKDQDLNFS 248 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPT------IDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +A + +G GI RL +++P+ I + + + L+ GA + E+ P+ Sbjct: 249 QA---AYEGANRGI-SGVRLGFVNPSNWCNSKITDLFGRTLKSLESEGAVLHEVQFPNFD 304 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +A+ AYY+I AEASSNL+RYD +R+G + TRSI FG EVK RI++GT+ Sbjct: 305 HAVQAYYLIMQAEASSNLSRYDSIRFGPQEMAASASGTVSKTRSIRFGPEVKRRILLGTH 364 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 +LS+ YD Y+ A+KIR+L+KRDF + F VDV+L PT PT AF LG++ ++ SM Sbjct: 365 ILSAGYYDDFYMSAQKIRSLVKRDFAKIFSL-VDVLLLPTAPTPAFKLGEKIDHHTSM-- 421 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +D T ++AGLPA S+P + + +P+GLQ+I + ++S G IE+ G Sbjct: 422 YKSDTATTPASLAGLPAGSIPMGVID-GLPVGLQIIAPGQFDSRVYSTGAAIEQIIG 477 >gi|317009159|gb|ADU79739.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori India7] Length = 453 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 186/454 (40%), Positives = 273/454 (60%), Gaps = 14/454 (3%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 QA+ S ++ + K RA+ + + + + +G+PI IKD + KG Sbjct: 6 QALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEVTC 65 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S YG +P Sbjct: 66 SSKILEGYVAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNP-----RD 120 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+KPTYGR SR G+I++ Sbjct: 121 KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY 180 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S DQ G IT+ V D++IL AI+G+D D+T NL + L++ + + I ++ Sbjct: 181 CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKHLNRD-KRFKIAILRD 239 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + D S + ++ + LK G +IVE + + Y + YYIIS AEASSNLAR+DG Sbjct: 240 HIKD-ASHEVQLAYENTLKALKGMGHEIVEKKMLDSHYQISVYYIISMAEASSNLARFDG 298 Query: 332 VRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 VRYG + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK Sbjct: 299 VRYGRMAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIK 358 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVP 449 + + FE+ VD+I TP PT+A N S +Y +D++T+ N++GLPA+S+P Sbjct: 359 EQYNKIFEE-VDLIFTPVAPTTAHLF----NYHASPLEMYLSDIYTIGANLSGLPALSLP 413 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A +P+G+Q I + F E++L +E+E Sbjct: 414 VAKDPLGLPIGMQFIAKVFDEQSLLDASYALEQE 447 >gi|39931512|sp|Q83HX2|GATA_TROW8 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A Length = 524 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 191/477 (40%), Positives = 281/477 (58%), Gaps = 20/477 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RSK++SA+E+ +S+I IE S+S++ A++ R A D+ + + L G+ Sbjct: 45 IRSKEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATKLSPLAGV 104 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T+ + T A S IL+G+ P Y +TV +++ +LGK N DEF MGSS E Sbjct: 105 PIAVKDMILTRDMPTTAGSKILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTE 164 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y +PW T GGS GGSSAAV+ ++GTDTGGSIR PA TGTV Sbjct: 165 YSAYKTTRNPWDL-----SRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTV 219 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GI+PTYG SR G+I+ A S DQ G + + D+A+L + IAGYD DA + ++ Sbjct: 220 GIRPTYGSVSRYGVIALASSFDQVGPCSSNILDAALLHEVIAGYDPADAVSIKDQDLNFS 279 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPT------IDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +A + +G GI RL +++P+ I + + + L+ GA + E+ P+ Sbjct: 280 QA---AYEGANRGI-SGVRLGFVNPSNWCNSKITDLFGRTLKSLESEGAVLHEVQFPNFD 335 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +A+ AYY+I AEASSNL+RYD +R+G + TRSI FG EVK RI++GT+ Sbjct: 336 HAVQAYYLIMQAEASSNLSRYDSIRFGPQEMAASASGTVSKTRSIRFGPEVKRRILLGTH 395 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 +LS+ YD Y+ A+KIR+L+KRDF + F VDV+L PT PT AF LG++ ++ SM Sbjct: 396 ILSAGYYDDFYMSAQKIRSLVKRDFAKIFSL-VDVLLLPTAPTPAFKLGEKIDHHTSM-- 452 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +D T ++AGLPA S+P + + +P+GLQ+I + ++S G IE+ G Sbjct: 453 YKSDTATTPASLAGLPAGSIPMGVID-GLPVGLQIIAPGQFDSRVYSTGAAIEQIIG 508 >gi|304440546|ref|ZP_07400433.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371024|gb|EFM24643.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Peptoniphilus duerdenii ATCC BAA-1640] Length = 471 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 187/488 (38%), Positives = 286/488 (58%), Gaps = 31/488 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E +D + D + E+++SYI+ IE + ++NAYI + A K+ Sbjct: 2 ELTKLGIKELQDGYKKGDFTKEEVLNSYIENIEKEDGKINAYITKTFELA--------KK 53 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +N D L GIP+ +KD + K + S IL+ + Y++ VT+K+ + G ++LGK+ Sbjct: 54 NLNRDGL-LSGIPLSLKDNISVKDVRLTCGSKILENYESPYDADVTKKVLEAGGLILGKV 112 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEFAMG++ +SYYG +P +D T PGGSSGGS+A+VAG + S+GTDTGG Sbjct: 113 NMDEFAMGATTRSSYYGATKNP---LDKT--LIPGGSSGGSAASVAGEMAVVSVGTDTGG 167 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S RQPAS+ G VGIKPTYG SR GI + A + D G + +TV D+ ILLKA+ G D Sbjct: 168 STRQPASYCGIVGIKPTYGTISRYGISTMANTFDSPGTMGKTVEDATILLKALKGRSIKD 227 Query: 243 ATCV---NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 AT + ++ D+++ ++G + IPK Y LD I+ ++ I L+D GAKI Sbjct: 228 ATSIENKSIDEVDFDKLDSNYLKGKNIAIPKVY-LDLDDERIESEFKTAIEILEDLGAKI 286 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILEMYENTRSIGFGQ 357 + + + + + Y+I+ E SSN+AR+DG+ YG R + + I EM++ TR GFGQ Sbjct: 287 NYVDMKYLKNVIETYHILVNGEISSNMARFDGIIYGKRTTDDYETIEEMFKKTRGEGFGQ 346 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EVK RIMIGT +LS + +Y +A K+R LIK + + E + IL+PT+P L Sbjct: 347 EVKKRIMIGTQILSLDLAEDYYYKALKVRGLIKSEMDKVLEDNM-FILSPTSPILPIKL- 404 Query: 418 KEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLF 474 ++ + IY D+FT+ NMAG P++SVP KK + +G+Q G+ ++ + Sbjct: 405 ---DSQMTPVEIYKADMFTIPANMAGCPSLSVP---MNKKGGLSVGIQFTGRRMKDNEIL 458 Query: 475 SVGQIIEK 482 + + E+ Sbjct: 459 NSAYLFER 466 >gi|146304502|ref|YP_001191818.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Metallosphaera sedula DSM 5348] gi|145702752|gb|ABP95894.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Metallosphaera sedula DSM 5348] Length = 471 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 185/475 (38%), Positives = 279/475 (58%), Gaps = 17/475 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + LR+ ++S E V I ++ A++ + +K E K+ + G+ Sbjct: 2 IMEIVNDLRNGNLSPDEYVGRTFDRIRRVEEKVRAFVTLRDEKD---VLEEVKKAVKGEG 58 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 R L G+ I +KD +T+GI T S +L+ + P Y++TV KL GAV+LGK NMDEFA Sbjct: 59 R-LSGLLIAVKDNISTRGIRTTCSSKMLENYVPPYDATVISKLKREGAVILGKTNMDEFA 117 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ ETSY+GP +PW TPGGSSGGS +A+A ++G+DTGGSIR PA Sbjct: 118 MGSTTETSYFGPTRNPWDL-----SRTPGGSSGGSGSALASGYVDVALGSDTGGSIRTPA 172 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 SFT T G+KP+YG SR G++++A SL+Q G + R D A+L IAG D+ DAT ++ Sbjct: 173 SFTSTYGLKPSYGTVSRYGLVAYANSLEQIGPMARNSTDLALLFSIIAGSDQRDATTIDY 232 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + +++G+ VG+ K+ ++ P + + ++ + GA I E +L Sbjct: 233 SSPSSINPI--TVKGIKVGVLKDV-MEASDPGVVGVVKDFLNKMSSEGAVIEETNLGMVN 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGT 367 Y LP YYII+ +EASSNLARYDGVRYG + + ++Y R GFG+EVK RI++G+ Sbjct: 290 YVLPTYYIIAMSEASSNLARYDGVRYGYSSNAEGNWRDVYSRNRGEGFGKEVKRRILLGS 349 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 ++LS+ Y+ Y+RA K R LI RD E D++++PT+P +G+ ++ M Sbjct: 350 FILSAGYYEQFYIRALKTRRLI-RDSLEKLFSRYDILVSPTSPILPPKIGEVIDDPVKMY 408 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 I DV TV N+A +PA+S+PA +P+G+QL+G+ + L V +E Sbjct: 409 AI--DVATVTANLAAIPALSIPAGF-HNGLPVGVQLMGRYLSDTFLMGVSLYMEN 460 >gi|320168124|gb|EFW45023.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Capsaspora owczarzaki ATCC 30864] Length = 467 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 184/458 (40%), Positives = 257/458 (56%), Gaps = 19/458 (4%) Query: 33 AIENSNSQMNAYIEVVAQ-KARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQ 90 AI + +NA+I + + A SD+R G +++G I +KD T + T Sbjct: 13 AIRAAQPSLNAFISIASDDHVLGLARASDERHARGLPLSEIDGALIAVKDNLCTTTMPTT 72 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDS 150 S +L F +++T Q+L GA+++ K NMDEF MGS N S YGP I+P +D Sbjct: 73 CASKMLANFTSPFDATPVQRLQKAGAIVVAKTNMDEFGMGSFNLNSAYGPAINPRFPLD- 131 Query: 151 TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 T T G S G ++A A A++G+DTGGS+R PA+F VG KP+YGR SR G+++ Sbjct: 132 TPVVTGGSSGGSAAAIAANLGLFAALGSDTGGSVRLPAAFCQVVGFKPSYGRVSRHGLVA 191 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-VPDYERALDQSIQGMTVGIP 269 +A SLD G++ TV ++ + IAG D D+TC LP P ++D ++ + VGIP Sbjct: 192 YASSLDTVGVLAPTVANARAIYDVIAGPDAQDSTC--LPEAPPQASSID--LKQLHVGIP 247 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 +YR+ LS +W I L GAK+ + LP T AL AYY+++ AE SSNLARY Sbjct: 248 VDYRIAELSEEALASWSWAIDRLTQLGAKVTPVRLPQTPKALAAYYVLACAEVSSNLARY 307 Query: 330 DGVRYGLRVEGKD---ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 GV YG R E +D +M +R+ GFG EV+ RI +GT+ LS YDS+YL A++IR Sbjct: 308 SGVEYGHRAEHQDQATFHQMIAKSRAEGFGPEVQRRIALGTHCLSRTMYDSYYLNAQRIR 367 Query: 387 TLIKRDFTEAFE----QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 I+ +F FE V V+L PT P A P K + DVFTV ++AG Sbjct: 368 AAIRAEFASVFETAQANSVHVLLCPTAPFVA-PQLKAAQALSQVAAFAMDVFTVPASLAG 426 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 LPAISVP + PLG+QLIG RE+ + SV + Sbjct: 427 LPAISVPT---DASGPLGVQLIGPYGREDVVLSVASAL 461 >gi|330444306|ref|YP_004377292.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlamydophila pecorum E58] gi|328807416|gb|AEB41589.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlamydophila pecorum E58] Length = 486 Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 182/475 (38%), Positives = 280/475 (58%), Gaps = 12/475 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR- 69 E R+ + S + SA E+ + I + ++ A+I + ++A+ A D + G+ Sbjct: 8 ELREAVVSGERSASEITKEFFSRIRENEKEIGAFISLCEERAKEKAAHVDAKRARGEPLG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PIG+KD G++T S +L+ ++ + +TV + + ++LGKLNMDEFAM Sbjct: 68 KLAGVPIGVKDNIHVLGLNTTCASRMLENYQAPFHATVIENIEAEDGIILGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ S + P +PW D + PGGSSGGS+AA+A CA ++G+DTGGSIRQPA+ Sbjct: 128 GSTTRYSAFHPTHNPW---DLSR--VPGGSSGGSAAAIAARFCAIALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G IT V D A+ + + G D DAT L Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPITTVVEDIALAMDVLGGKDPKDATSRELF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + L + + +G+P + L+ L I K + ++ L+ G+KIV++ L + Sbjct: 243 TSSFLDGLSLEVPKL-IGVPLNF-LEGLREDIKKNFFDSLAVLERQGSKIVDVDLDILHH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A+ YYII+ AEA++NLAR+DG+RYG R + + I E+YE +R+ GFG+EV RI++G YV Sbjct: 301 AVSIYYIIASAEAATNLARFDGIRYGYRAKRQSIQEVYECSRTEGFGKEVIRRILLGNYV 360 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ +Y +A IR I + F+ AFE+ DVI P AF G + + Sbjct: 361 LSAERQSVYYKKAASIRAKIVQTFSVAFER-CDVIALPVCSCPAFEAG---DILDPLALY 416 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 D++TVA+N+A LPAI+VP+ + +PLGLQ+IG+ ++ + VG ++ A Sbjct: 417 LQDIYTVAMNLAYLPAIAVPSGFSREGLPLGLQIIGEHGKDIQVCQVGYSFQEHA 471 >gi|315638128|ref|ZP_07893311.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter upsaliensis JV21] gi|315481808|gb|EFU72429.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Campylobacter upsaliensis JV21] Length = 453 Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 178/412 (43%), Positives = 261/412 (63%), Gaps = 12/412 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +GIP+ IKD + K S IL G+ Y++T L NG G+ NMDEFAMGS Sbjct: 49 QGIPVAIKDNISVKDWELTCGSKILQGYVAPYDATAIVNLKKNGFSPFGRANMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S TS+YG ++P +D + PGGSSGGS+AAVA L AS+G+DTGGS+RQPA+F Sbjct: 109 STATSFYGRTLNP---LDFSR--VPGGSSGGSAAAVAANLALASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ +++ SLDQ G++T+ V D+A+L AIAG+DE D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLAAYSSSLDQIGVLTQNVEDAALLYDAIAGHDEKDSTSANVSFE 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ +++ + + + + Y ++ S + T + I LK G +IV +L ++ + Sbjct: 224 PTSDKLNANVK-LKIAVIENY-INAASEEVKNTLLKSIEALKAHGHEIVYRTLQDYEFDI 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E +++ ++Y NTRS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIATAEASANLSRYDGVRYGRRSEHCENLKDLYINTRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK + E Q D+I P TPT+AF +++ M Sbjct: 342 SSGYYDAYYIKAQKARAYIKAKYEEIL-QDCDLIFMPVTPTTAFAFDTQKS---PMQSYL 397 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D++T++VN+AGL ISVP + + + QLI + + E+TL + +EK Sbjct: 398 EDIYTISVNLAGLGGISVPVGKDKDGLNISAQLICRAYDEQTLLNGALNLEK 449 >gi|28493379|ref|NP_787540.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Tropheryma whipplei str. Twist] gi|39931508|sp|Q83GA1|GATA_TROWT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|28476420|gb|AAO44509.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Tropheryma whipplei str. Twist] Length = 524 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 191/477 (40%), Positives = 280/477 (58%), Gaps = 20/477 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RSK++SA+E+ +S+I IE S+S++ A++ R A D+ + + L G+ Sbjct: 45 IRSKEVSALEVAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEELKSATKLSPLAGV 104 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD T+ + T A S IL+G+ P Y +TV +++ +LGK N DEF MGSS E Sbjct: 105 PIAVKDMILTRDMPTTAGSKILEGWIPPYNATVIERISRARMPILGKTNQDEFGMGSSTE 164 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S Y +PW T GGS GGSSAAV+ ++GTDTGGSIR PA TGTV Sbjct: 165 YSAYKTTRNPWDL-----SRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTV 219 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GI+PTYG SR G+I+ A S DQ G + + D+A+L + IAGYD DA + ++ Sbjct: 220 GIRPTYGSVSRYGVIALASSFDQVGPCSSNILDAALLHEVIAGYDPADAVSIKDQDLNFS 279 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPT------IDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +A + +G GI RL +++P+ I + + + L+ GA + E+ P+ Sbjct: 280 QA---AYEGANRGI-SGVRLGFVNPSNWCNSKITDLFGRTLKSLESEGAVLHEVQFPNFD 335 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +A+ AYY+I AEASSNL+RYD +R+G + TRSI FG EVK RI++GT+ Sbjct: 336 HAVQAYYLIMQAEASSNLSRYDSIRFGPQEMAASASGTVSKTRSIRFGPEVKRRILLGTH 395 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 +LS+ YD Y+ A+KIR L+KRDF + F VDV+L PT PT AF LG++ ++ SM Sbjct: 396 ILSAGYYDDFYMSAQKIRLLVKRDFAKIFSL-VDVLLLPTAPTPAFKLGEKIDHHTSM-- 452 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +D T ++AGLPA S+P + + +P+GLQ+I + ++S G IE+ G Sbjct: 453 YKSDTATTPASLAGLPAGSIPMGVID-GLPVGLQIIAPGQFDSRVYSTGAAIEQIIG 508 >gi|329942645|ref|ZP_08291424.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlamydophila psittaci Cal10] gi|332287240|ref|YP_004422141.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila psittaci 6BC] gi|313847828|emb|CBY16821.1| glutamyl-tRNA amidotransferase subunit A [Chlamydophila psittaci RD1] gi|325506998|gb|ADZ18636.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila psittaci 6BC] gi|328814905|gb|EGF84894.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlamydophila psittaci Cal10] gi|328914486|gb|AEB55319.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlamydophila psittaci 6BC] Length = 491 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 177/478 (37%), Positives = 284/478 (59%), Gaps = 15/478 (3%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-AR 69 E R+ + S + SA + + I+ ++Q+ A++ + ++A A D ++ G+ Sbjct: 8 ELRNAVVSGESSATAIAKYFYNRIKTEDNQIGAFLSLCEERAYEKAAIIDAKLARGEPVG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+GIKD +G+ T S +L+ + +++TV +++ V+LGKLNMDEFAM Sbjct: 68 KLAGVPVGIKDNIHIRGLRTTCASKMLENYIAPFDATVVERIEAEDGVILGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ + S + P +PW D + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+ Sbjct: 128 GSTTQYSAFHPTKNPW---DFSR--VPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G +T V D A+ + AG D+ DAT Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDVFAGKDDRDATSQKFF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ AL + + +G+P + LD L + + + ++ L+ G++IVE+ L + Sbjct: 243 TGSFQEALSLEVPSL-IGVPMGF-LDGLRDDVKENFFASLNVLERQGSRIVEVDLNILDH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ YYI++ AEA++NLAR+DG+RYG R E I ++Y +R GFG+EV RI++G Y Sbjct: 301 AVSVYYIVASAEAATNLARFDGIRYGYRSPEAHSIEDIYSISRVQGFGKEVMRRILLGNY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ +Y + IR I + F +A+E+ DVI P AF G+ + + Sbjct: 361 VLSAERQSVYYKKGSAIRAKIIQAFQKAYEK-CDVIAMPVCSCPAFTDGEILDPT----S 415 Query: 429 IY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +Y D++TVA+N+A LPAI+VP+ + +PLG Q+IGQ +++ + VG ++ +G Sbjct: 416 LYLQDIYTVAMNLAFLPAIAVPSGFSREGLPLGFQVIGQKGKDQQVCQVGYSFQEHSG 473 >gi|325282691|ref|YP_004255232.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus proteolyticus MRP] gi|324314500|gb|ADY25615.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus proteolyticus MRP] Length = 489 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 187/460 (40%), Positives = 284/460 (61%), Gaps = 22/460 (4%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +++ +RS +S V ++ I + S++NA + V + A E +R+ G+A Sbjct: 9 TQTAQAIRSGTVSPDTAVQESLRRI-RAASELNAVLSEVETGEQVQALE--RRLAAGEAL 65 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ IKD +G T SH+L+ +R Y +T Q+L D GA+++GK N+DEFAM Sbjct: 66 PLAGVPVIIKDNLNLRGTRTTCGSHMLEEYRSPYTATAVQRLIDAGAIVVGKANLDEFAM 125 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GSSNE S +GP ++PW D+ PGGSSGGS+AA+A L +IG+DTGGS+RQPA+ Sbjct: 126 GSSNENSAFGPALNPW----GKDR-VPGGSSGGSAAAIAARLAPLTIGSDTGGSVRQPAA 180 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G+KPTYGR SR G++++A SLD + D A+ ++ ++G+D DAT + Sbjct: 181 LCGVYGMKPTYGRISRSGLVAYASSLDTVAPFALSAADLALTMQTMSGHDPQDATSLQEE 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ LD + + VG+ +E + L+ + + +Q S L+ AGA + E+SLPH ++ Sbjct: 241 T-RFDGPLD--LSRLRVGLVREGQ-QGLTGGVQASLEQMRSALETAGATVSEVSLPHLKH 296 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV---EGKDILEMYENTRSIGFGQEVKHRIMIG 366 A+ YYI++ AEASSNL+RYDG+ YG R +G + M +TR FG EV+ RIM+G Sbjct: 297 AVATYYIVAMAEASSNLSRYDGMHYGRRAADSKGGAVPSML-HTREEFFGAEVQKRIMLG 355 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 T++LSS + +Y +A ++R LI +F AFE DV+L PT+P AF LG E S + Sbjct: 356 TFILSSGYSERYYTKALQVRRLIAEEFERAFED-YDVLLMPTSPFPAFGLG--ERISDPL 412 Query: 427 GHIYNDVFTVAVNMAGLPAISVPA---ALCEKKMPLGLQL 463 DV TVA+N+AG+PA++VPA A+ +++P+GLQ Sbjct: 413 AMYAADVNTVAINLAGIPALNVPAGFEAVEGERLPIGLQF 452 >gi|225629834|ref|ZP_03787752.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591312|gb|EEH12434.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 292 Score = 292 bits (747), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 158/293 (53%), Positives = 211/293 (72%), Gaps = 5/293 (1%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRIINGDARDLEGIP 75 K SAVELV+++I A+EN ++NA+I +A KA AA+E R + L G+P Sbjct: 2 KSFSAVELVEAHISAVENE--KLNAFITKTPEIAMKAAKAADEHFSRQKDDLISLLMGVP 59 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +GIKD F TKGI T ACS +L+ F P YESTV+ L +GA MLGKLNMDEFAMGS+N Sbjct: 60 VGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLKSGAAMLGKLNMDEFAMGSANTN 119 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+GPV + W +K PGGSSGGS+A+VAGFLCA ++G+DTGGS+RQPA++ G VG Sbjct: 120 SYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVG 179 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPTYGRCSR G+I+FA SLDQAG+ITR+V DSA++L+AI GYD D+ PVP + Sbjct: 180 IKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICGYDTKDSISSEKPVPKFSS 239 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 ++ ++G +GI KEYR+D +S I W++ S+LK+ GA++V+I+LPHT+ Sbjct: 240 FINGDVKGKCIGISKEYRMDGISEEIVHNWERVASYLKENGAEVVDITLPHTK 292 >gi|210632309|ref|ZP_03297276.1| hypothetical protein COLSTE_01170 [Collinsella stercoris DSM 13279] gi|210159625|gb|EEA90596.1| hypothetical protein COLSTE_01170 [Collinsella stercoris DSM 13279] Length = 509 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 181/470 (38%), Positives = 276/470 (58%), Gaps = 18/470 (3%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 + +A + + + A+ ++ + A+++V + A AAE D G+ L G+P I Sbjct: 26 EFTATAVAHAALDAVGQRDADVQAFLQVTPELALKAAERIDAARAAGEPLPPLAGVPFAI 85 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G T SH+L+ + Y +T +++ + G + +GK NMDEFA GSS E+S + Sbjct: 86 KDNMNLTGTRTTCASHMLENYESPYTATCVRRMLNAGCLPVGKANMDEFAFGSSTESSAF 145 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 +PW + PGGSSGGS+AAVA + A ++G+DTGGSIRQPA+ G VG+KP Sbjct: 146 HRTNNPWDL-----ERVPGGSSGGSAAAVAAGMTALALGSDTGGSIRQPAALCGVVGMKP 200 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI--AGYDECDATCVNLPVPDYERA 256 TYG SR G+++F SLDQ G RTV D A+ L A+ G D D T ++ + Sbjct: 201 TYGMVSRYGVVAFGSSLDQVGPFGRTVEDVALALDALTAGGRDPFDGTSQDVE-GGFAAH 259 Query: 257 LDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 ++ I+G+ VG IP L+P + + L++ GAK++E+ LPH A+ AYY Sbjct: 260 VNDGIEGLRVGVIPSFMDAVGLAPEVKAAVEAAACSLEEQGAKLIEVDLPHLDAAIAAYY 319 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I PAEA SNLAR+DGVRYG + G L E +R+ GFG E K R M+G Y+LSS Sbjct: 320 VIGPAEAFSNLARFDGVRYGYQEPGCATLAEQSAKSRAHGFGAEAKRRQMLGAYLLSSGV 379 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDV 433 YD +Y A+K R+LI D+ A+E+ VDVIL P +PT+AF G+ + + +Y +D+ Sbjct: 380 YDKYYYAAQKARSLITTDYERAYEK-VDVILMPASPTAAFKFGELSDPT----QMYLSDM 434 Query: 434 FTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT+++N+AG ++VP + +P+ +QL+G+ F + L + + +E+ Sbjct: 435 FTISINIAGNGGVTVPLGTGADSGLPVAVQLVGRAFDDRRLLTFARAVER 484 >gi|255938580|ref|XP_002560060.1| Pc14g00660 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584681|emb|CAP74207.1| Pc14g00660 [Penicillium chrysogenum Wisconsin 54-1255] Length = 500 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 183/462 (39%), Positives = 268/462 (58%), Gaps = 43/462 (9%) Query: 62 RIINGDARDLEGIP--------IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 R+ D R EG P I IKD T+ + T S ILD F + +TV +L Sbjct: 35 RVKEADVRKEEGKPKSAVDGRLISIKDNICTRDLPTTCASRILDKFTSPFNATVVDQLEA 94 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA++ GK N+DEF MGS++ S++GPV +P R D + GGSSGGS+A+VA C Sbjct: 95 AGAIVAGKTNLDEFGMGSNSTNSHFGPVKNPRRDSSGED-LSAGGSSGGSAASVAADQCL 153 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 AS+GTDTGGS+R PA++TGTVG KP+YG SR G+ ++A SLD GII +T + + Sbjct: 154 ASLGTDTGGSVRLPAAYTGTVGFKPSYGLISRWGVAAYANSLDTVGIIGKTTANVRDIFD 213 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQ--------GMTVGIPKEYRLDYLSPTIDKTW 285 + +D D T +++ +A Q+ Q + VG+P EY + L+P++ + W Sbjct: 214 ILNQHDHRDPTSLSISSRSRIQASLQTPQLASRLTSAPLRVGVPIEYNVSELTPSVRRAW 273 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--- 342 ++ LK G + +SLP T++AL YY++ PAEASSNLA+YDGVRYG R EG D Sbjct: 274 ALSLAHLKKQGHTVHSVSLPDTKHALSTYYVLGPAEASSNLAKYDGVRYGTRAEGPDGDG 333 Query: 343 --ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--- 397 ++ NTR GFGQEVK RI++GT+ LS+ D+++++A+++R L+++DF F Sbjct: 334 KPDGYLFSNTRGQGFGQEVKRRIVLGTFTLSADAIDNYFIQAQRVRRLVQQDFDAVFTAK 393 Query: 398 -------------EQGVDVILTPTTPTSAFPLGKEENNS---GSMGHIYNDVFTVAVNMA 441 E VDVI+ PT P+S L +NS + DVFTV ++A Sbjct: 394 HPLAAQGADKIAKENEVDVIICPTAPSSPPRLSDLMSNSTKKSPLDAYVADVFTVPASLA 453 Query: 442 GLPAISVPAALCEKKMP--LGLQLIGQPFREETLFSVGQIIE 481 GLPAISVP + ++ G+Q+IGQ ++ + VG+++E Sbjct: 454 GLPAISVPVMVSGQQDAELAGIQVIGQYGDDQLVMRVGEMLE 495 >gi|255569859|ref|XP_002525893.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus communis] gi|223534807|gb|EEF36497.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus communis] Length = 561 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 184/503 (36%), Positives = 293/503 (58%), Gaps = 44/503 (8%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARD 70 R L S++++A ++ +S++ I+ + Q+N+++ V + A+E D +I G D Sbjct: 53 RHSLLSRNLTATQVAESFLTRIKLTEPQLNSFLHV-SDNVLQQAKEIDDKIARGEKDVGP 111 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ +G+KD T + + S IL+ +R Y++T ++L + GA+++GK N+DEF MG Sbjct: 112 LAGVLVGVKDNICTVDMPSTGGSRILENYRAPYDATSVKRLKEMGAIVVGKTNLDEFGMG 171 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ E S + +PW PGGSSGGS+AAV+ C S+G+DTGGS+RQPASF Sbjct: 172 STTEGSAFQVTSNPWDV-----SRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASF 226 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT--RTVRDSAILLKAIAGYD--------- 239 G VG+KPTYGR SR G++S+A SLD G+ + + ++ + D Sbjct: 227 CGVVGLKPTYGRVSRFGLMSYASSLDVIGLALAHQLLMLEFFYMQFLVMIDMMPPAVGDR 286 Query: 240 ----ECD------ATCVNLPVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTID 282 EC+ C VPD+ + ++G+ VG+ E D + + Sbjct: 287 ELALECNLHGFILVKCAE--VPDFTSQFTSINLVESKPLKGLRVGLICETLDDAVDNGVK 344 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD 342 S L++ G + E+SLP LPAYYI++ +E+SSNL+RYDGVRYG +V + Sbjct: 345 SAISDAASHLEELGCSVTEVSLPSFSLGLPAYYILASSESSSNLSRYDGVRYGNQVGADE 404 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 + +Y ++R+ GFG EVK RI++GTY LS+ YD++Y RA+++RTLI++ F A + D Sbjct: 405 LNGLYGDSRAKGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKAALDAN-D 463 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPL 459 ++++P P++A+ +G++ N+ +M D+ TV VN+AGLPA+ +P E ++P+ Sbjct: 464 ILISPAAPSAAYKIGEKRNDPLAM--YAGDIMTVNVNLAGLPALVLPCGFVEGGPARLPV 521 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 GLQ+IG F EE L VG I E+ Sbjct: 522 GLQMIGAAFDEEKLLKVGHIFEQ 544 >gi|226320439|ref|ZP_03796006.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi 29805] gi|226234192|gb|EEH32906.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi 29805] Length = 481 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 176/453 (38%), Positives = 263/453 (58%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + NG DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNGVTEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L D GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKDKGAIIIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G + ++ D A++LK G D+ D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFSHSIEDIALILKHTCGSDKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + L G I E+S+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFTKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ EG + + Y RS +EVK RI++G Y+LS R YDS +Y +A +I + LI Sbjct: 329 KRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|269217155|ref|ZP_06161009.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Slackia exigua ATCC 700122] gi|269129292|gb|EEZ60377.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Slackia exigua ATCC 700122] Length = 493 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 194/492 (39%), Positives = 289/492 (58%), Gaps = 18/492 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L M + +R+ L SK+ SA E+ +++ ++ + +++A++E A AA+ D Sbjct: 1 MAHLTDMTAACTREGLASKEFSAREVAQAHLDHMDAAEPKIHAFLERTDALALDAADRID 60 Query: 61 KRIINGDARDL---EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 I G DL G+P+ KD KG HT S +L+ + Y +T Q++ D G + Sbjct: 61 AAIAAGTFADLGPLAGVPVAFKDNMNQKGTHTTCASRMLESYVAPYTATCVQRMLDAGCL 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGKLNMDEFA GSS E S +G +PW PGGSSGGS+AAVA + ++G Sbjct: 121 PLGKLNMDEFAFGSSTENSAFGVTRNPWDLAR-----VPGGSSGGSAAAVAAGMAPVTLG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGSIRQPA+F G VG+KPTYG SR G+++F SLDQ G RTV D+A L A+ G Sbjct: 176 SDTGGSIRQPAAFCGVVGVKPTYGMVSRYGVVAFGSSLDQVGPFARTVADAASALDALVG 235 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAG 296 D D+T + + +A Q ++GM VGI + + L+ + + L+ AG Sbjct: 236 RDPLDSTSQDA-PAGFAQAAAQDVRGMRVGIVRAFMEASGLTSEVASRTAEAARALEAAG 294 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGF 355 A +V++ LPH++ A+ AYY++ P EA SNLAR+D VRYG G D+ E +R+ GF Sbjct: 295 ATLVDVELPHSEAAISAYYVLGPCEAFSNLARFDSVRYGACEPGHADLGAQQEASRAAGF 354 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G E K RI++G+Y+LS+ YD +Y A+++RTLI +DF A+E DVIL P +P +AF Sbjct: 355 GPEAKRRILLGSYLLSAGVYDRYYYPAQQVRTLITQDFARAYES-CDVILMPASPHAAFE 413 Query: 416 LGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETL 473 G + + +Y +D+FTV +N+ G +SVP L + MP+G+QL+ F + + Sbjct: 414 FGALSDPA----QMYLSDIFTVPINIVGNGGMSVPVGLGADTGMPIGVQLVSPQFEDRNM 469 Query: 474 FSVGQIIEKEAG 485 F ++E+ G Sbjct: 470 FRAAAVLERAYG 481 >gi|332297743|ref|YP_004439665.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema brennaborense DSM 12168] gi|332180846|gb|AEE16534.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema brennaborense DSM 12168] Length = 515 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 188/500 (37%), Positives = 276/500 (55%), Gaps = 28/500 (5%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAA----- 55 LN +S R L + + ++ LV S I E NS +NA++E+ A Sbjct: 5 LNKRTISGIRKSLENGETTSEALVRSSISVFEADKNSAIPLNAFLELYDSALDLAKACDA 64 Query: 56 ------AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ 109 A+ ++ A+ L G+P +KD + KG S IL+G+ Y +TV Q Sbjct: 65 ERAAAAAQGTEALAALLAAKPLLGVPFAVKDNISVKGKRLTCASRILEGYVAPYNATVVQ 124 Query: 110 KLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAG 169 +L D GAV LG+ NMDEFAMGSS E S YGP +P ++ GGSSGGS+AAVA Sbjct: 125 RLLDAGAVPLGRCNMDEFAMGSSTEYSIYGPTRNPINR-----EYVSGGSSGGSTAAVAA 179 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 +GT+TGGS+R PAS+ G G+K TYG SR G++++ SLDQ G++ T RD A Sbjct: 180 NQALFGLGTETGGSVRLPASYCGVYGLKTTYGVLSRWGVVAYGSSLDQVGLLGHTPRDIA 239 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSIQG----MTVGIPKEY-RLDYLSPTIDKT 284 + L ++G D D T LP + R L G + + +P+++ L P + Sbjct: 240 LPLSVMSGADFYDDTSAELPEAETLRDLQALSAGELSKLKIAVPRQFLESKGLDPDVGAV 299 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDI 343 + +W + GA + + +P A+ +YY+I+ +EA+SNL+R+DG+RYG R + GK Sbjct: 300 FDATRAWFESKGAAVTVVDIPVLDAAIASYYVIALSEAASNLSRFDGIRYGRRSDPGKGF 359 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 E+Y TRS GFG EVK RI+IG YVLS + Y + +R I+R+ E F D+ Sbjct: 360 DELYVRTRSEGFGPEVKRRIIIGNYVLSEQFSGDCYKKGMTVRARIQREIAELFNS-YDL 418 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 IL PT PT+AF LG++ ++ M +D+FT VN+A +P++SVPA + MP+G+Q Sbjct: 419 ILCPTCPTAAFKLGQKVDDPLEM--YLSDLFTTFVNLARIPSLSVPAGVTSVGMPVGVQF 476 Query: 464 IGQPFREETLFSVGQIIEKE 483 G F E + + Q E+E Sbjct: 477 AGAMFSEAKILRIAQAWEQE 496 >gi|224533683|ref|ZP_03674271.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi CA-11.2a] gi|224512976|gb|EEF83339.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi CA-11.2a] Length = 481 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 175/453 (38%), Positives = 263/453 (58%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + NG DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNGVTEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L D GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKDKGAIIIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G + ++ D A++LK G D+ D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFSHSIEDIALILKHTCGSDKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + L G + E+S+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFTKFKLDLLSKGINVKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ EG + + Y RS +EVK RI++G Y+LS R YDS +Y +A +I + LI Sbjct: 329 KRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|289583196|ref|YP_003481662.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Natrialba magadii ATCC 43099] gi|289532749|gb|ADD07100.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Natrialba magadii ATCC 43099] Length = 432 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 187/434 (43%), Positives = 256/434 (58%), Gaps = 20/434 (4%) Query: 59 SDKRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 SD+RI D L G + +KD +TKG+ T S +L+ + P Y++TV +L GA Sbjct: 8 SDERIEGDSDADGPLAGRTVAVKDNISTKGVATTCGSAMLEDYVPPYDATVISRLKAAGA 67 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++GK NMDEF MGS+ ETS +GP +P + PGGSSGGS+AAVA ++ Sbjct: 68 TIVGKANMDEFGMGSTTETSAFGPTDNP-----AAPGHVPGGSSGGSAAAVAAGKADLAL 122 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+DTGGSIR PA+F G VGIKPTYG SR G++++ SL+Q G TV D+A LL IA Sbjct: 123 GSDTGGSIRCPAAFCGVVGIKPTYGLVSRYGLVAYGNSLEQIGPFGETVEDAAALLDVIA 182 Query: 237 GYDECDATCVNL-PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 G DE DAT + +Y A + G+T+G+P E +D W I+ L+D Sbjct: 183 GSDERDATTRDEGDNTNYTDAATGDVDGLTIGVPTELLEGADEDVVDTFW-DAIADLEDQ 241 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-------EMYE 348 GA+ E+SLP ++A+ AYY+I+ +EASSNLAR+DGVRYG EG+ E + Sbjct: 242 GAEYHEVSLPSVEHAVEAYYVIAMSEASSNLARFDGVRYGPETEGEGDGDSGGNWNETFS 301 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 R GFG EVK RI++GTY LS+ +D +Y +A+ R +K+DF EA + DV+ +PT Sbjct: 302 QVRKDGFGDEVKRRILLGTYALSAGYHDKYYKKAQDARAWVKQDFDEALSE-ADVLASPT 360 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQP 467 P + F G+ + M D TV VN+A LPAISVPA + +P+GLQL+G Sbjct: 361 MPVTPFEQGESLEDPLQM--YLADANTVPVNLADLPAISVPAGESDADGLPVGLQLVGPA 418 Query: 468 FREETLFSVGQIIE 481 F EE L +E Sbjct: 419 FGEERLIRAASALE 432 >gi|70607088|ref|YP_255958.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] gi|76363153|sp|Q4J965|GATA_SULAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|68567736|gb|AAY80665.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] Length = 476 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 181/482 (37%), Positives = 280/482 (58%), Gaps = 16/482 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + + L++ +++ + V+ + IE ++++I + + + +E K I N Sbjct: 2 IEDVVESLKNGNLTPEDYVEKTYEKIERVEKLIHSFITI--RNKQEIIDEVKKNISNKHG 59 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L G+ I IKD +T GI T S IL+ + P Y++TV +KL GAV++GK NMDEFA Sbjct: 60 K-LAGVLIAIKDNISTLGIRTTCASRILEDYIPPYDATVVEKLKSEGAVIIGKTNMDEFA 118 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS+ ETSY+GP +PW + TPGGSSGGS A +AG + ++G+DTGGSIR PA Sbjct: 119 MGSTTETSYFGPTKNPWDL-----ERTPGGSSGGSGAVLAGGIVELALGSDTGGSIRAPA 173 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G G+KP+YG SR G+I++A SL+Q G + + D +L IAG D DAT +++ Sbjct: 174 AFNGVFGLKPSYGTVSRYGLIAYANSLEQIGPMAKNAEDLELLYDVIAGEDWRDATTISI 233 Query: 249 PVPDYER--ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +Y+R + ++ + + + K+ L+ + + + + L G I I Sbjct: 234 NKNEYKRDGSSKVDLKNIKIAVLKDI-LEASEKPVTSAFNEILDKLVSEGVSIDYIEFKL 292 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMI 365 +YALPAYYII+ +EASSNLAR+DGVRYG I + Y R GFG EVK RIM+ Sbjct: 293 AEYALPAYYIIAMSEASSNLARFDGVRYGYSAHYDGIWKDTYGKNRGEGFGIEVKRRIML 352 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+++LS+ Y+ +Y++A K+R LIK + +Q D I +PT P LG+ + Sbjct: 353 GSFILSAGYYEQYYIKALKVRRLIKDEIDRILKQ-YDFIASPTMPIIPPKLGEVVGDPLK 411 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 M + D+ TV N+AG+PA+S P +P+GLQL+G + L ++ + IEK + Sbjct: 412 MYAM--DLNTVIANLAGVPALSQPIGFY-NNLPIGLQLMGSYLSDYKLINISKNIEKISK 468 Query: 486 YF 487 Y+ Sbjct: 469 YY 470 >gi|207092177|ref|ZP_03239964.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori HPKX_438_AG0C1] Length = 403 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 178/408 (43%), Positives = 256/408 (62%), Gaps = 14/408 (3%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD + KG S IL+G+ Y ++V + L N G NMDEFAMGS+ E+S Sbjct: 2 IKDNISVKGWEITCSSKILEGYIAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSC 61 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG +P PGGSSGGS+AAVAG L A++G+DTGGSIRQPAS+ G VG+K Sbjct: 62 YGITKNP-----RDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLK 116 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYGR SR G+I++ S DQ G IT+ V D++IL AI+G+D D+T NL + L Sbjct: 117 PTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDNKDSTSANLKPTQTFKNL 176 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 ++ + + + +++ D S + ++ + LK+ G +IVE + + Y + YYII Sbjct: 177 NRD-KRFKIAVLRDHIKD-ASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYII 234 Query: 318 SPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 S AEASSNLAR+DGVRYG R + KD+ E+Y +RS GFG EVK RIM+G +VLSS YD Sbjct: 235 SMAEASSNLARFDGVRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYD 294 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFT 435 ++YL+A+++R +IK + + FE+ VD+I TP PT+A N S +Y +D++T Sbjct: 295 AYYLKAQQMRLMIKEQYNKIFEE-VDLIFTPVAPTTAHLF----NYHASPLEMYLSDIYT 349 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + N++GLPA+S+P A +P+G+Q I + F E++L V +E+E Sbjct: 350 IGANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQE 397 >gi|330834352|ref|YP_004409080.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Metallosphaera cuprina Ar-4] gi|329566491|gb|AEB94596.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Metallosphaera cuprina Ar-4] Length = 470 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 190/476 (39%), Positives = 277/476 (58%), Gaps = 29/476 (6%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKRIINGDARDLE 72 + L+S D+ E V + I ++ A+I + Q ++S K +NG L Sbjct: 7 NSLKSGDLDPNEYVAKTFERIRKHEGKIKAFITIRDEQNILNEVKQSIK--VNGR---LS 61 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+ I IKD +TKGI T S LD + P Y++TV KL GAV++GK NMDEFAMGS+ Sbjct: 62 GVLIAIKDNISTKGIRTTCASRTLDNYVPPYDATVISKLKSEGAVIIGKTNMDEFAMGST 121 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ETSYYGP +PW D T TPGGSSGGS++A+A ++G+DTGGSIR PASFT Sbjct: 122 TETSYYGPTRNPW---DVTR--TPGGSSGGSASALAAGYVELALGSDTGGSIRTPASFTS 176 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL--PV 250 T G+KP+YG SR G++++A SL+Q G + + D A+L IAG D DAT +N P Sbjct: 177 TYGLKPSYGTVSRYGLVAYANSLEQIGPMAKNSSDLALLFSVIAGNDNKDATTINFNSPY 236 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLS---PTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P E SI+G+ VG+ LD ++ P + + ++ + GA I E L Sbjct: 237 PVSE----VSIKGLKVGV----LLDVMNNSDPEVRSIVRDFLNKMASEGAVIGETELGMV 288 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIG 366 Y LP YYII+ +EASSNL+RYDGVRYG + + + E++ R GFG+EVK RI++G Sbjct: 289 DYVLPTYYIIAMSEASSNLSRYDGVRYGYSTDAEGNWKEVFSKNRGEGFGREVKRRILLG 348 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 +++LS+ Y+ Y+RA K R LI RD E DV+++PT+P +G+ ++ M Sbjct: 349 SFILSAGYYEQFYIRALKTRRLI-RDSIERLFGKYDVLVSPTSPVLPPKIGEVIDDPVKM 407 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ TV N+A +P++S+PA +P+G+Q +G+ + L + +E Sbjct: 408 YAM--DIATVTSNLAAIPSLSLPAGFY-NGLPVGVQFMGRYLSDTLLMGISLFMEN 460 >gi|256372321|ref|YP_003110145.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256008905|gb|ACU54472.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 479 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 200/482 (41%), Positives = 285/482 (59%), Gaps = 12/482 (2%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ AV +R +R + A E++++Y + +++A++ + AR A D + Sbjct: 7 LDLGAVDIAR-AVREGAVRAEEVLEAYEAQVAVEEPEVHAFLHLDFDAARRRAAAVDAAV 65 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G D L G+PI IKD +G+ T A S IL+G+ Y +TV ++ G V++GK Sbjct: 66 RAGHDPGPLAGVPIAIKDNIVQEGVPTTAGSRILEGWVSPYSATVVDRVLAAGGVIVGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEFAMGSS E S +GP +P +D PGGSSGGS+AAVA A ++G+DTGG Sbjct: 126 NLDEFAMGSSTENSAFGPTRNP-HDLDRV----PGGSSGGSAAAVAARFSALALGSDTGG 180 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIRQPAS G VG+KPTYG SR G+I+FA SLDQ G TV D+A LL ++G+D D Sbjct: 181 SIRQPASLCGVVGVKPTYGAISRYGLIAFASSLDQIGPFAATVDDAAALLAVLSGHDPRD 240 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 AT P D+ + G TVG+ E + P + + L+ GA +V + Sbjct: 241 ATSAPRG-PIVSDPSDRDVAGWTVGVVTEL-AETADPAVAAALEAAARHLERLGASVVSV 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 S+P AL AYY+++PAEASSNLAR+DGVRYGLRVE EM TRS GFG EVK R Sbjct: 299 SIPEVAAALAAYYVVAPAEASSNLARFDGVRYGLRVEALTTDEMMVATRSAGFGDEVKRR 358 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+GTY LS+ D+ Y++A+++RT + AF VDV++TPT+PT+AF LG+ + Sbjct: 359 IMLGTYALSAGYRDALYVQAQRVRTWLAAGLARAFAD-VDVLITPTSPTTAFRLGERVAD 417 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M +DV TV N+ G PA+SVP ++P+G+Q++ + + + + +E Sbjct: 418 PVAM--YRSDVCTVPSNLVGGPAVSVPFGYDADRLPIGIQVMAPAWEDARMLVAARALEA 475 Query: 483 EA 484 A Sbjct: 476 GA 477 >gi|307354070|ref|YP_003895121.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanoplanus petrolearius DSM 11571] gi|307157303|gb|ADN36683.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanoplanus petrolearius DSM 11571] Length = 434 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 177/416 (42%), Positives = 258/416 (62%), Gaps = 15/416 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD +TKGI T A S IL G+ P Y++ V L GA ++GK NMDEF MG Sbjct: 31 LSGIPVAVKDNISTKGIETTAGSKILQGYIPPYDAHVVAMLKKEGAAIVGKTNMDEFGMG 90 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ E S +GP +P D T PGGSSGGS+AA+A + ++G+DTGGSIR PASF Sbjct: 91 TTTENSAFGPTTNPC---DPTR--VPGGSSGGSAAAIASGMVPMALGSDTGGSIRCPASF 145 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+I+++ SL+Q G + + V + L+K I+ DE D+T + Sbjct: 146 CGIVGLKPTYGRVSRYGLIAYSNSLEQIGPMAKDVSGVSTLMKIISVPDEFDSTAYH--- 202 Query: 251 PDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y D +SI+G +GIP EY + + + + + I L++ GA+ VE S+P Y Sbjct: 203 NQYNHDPDPESIKGKKIGIPSEYFGEGVDERVAEKIRDAIGVLEELGAETVECSIPSMSY 262 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTY 368 AL AYY+ +EASSNL+R+DG+R+G +V+ K E + + R FG+EV RIM+GT+ Sbjct: 263 ALAAYYVTCTSEASSNLSRFDGIRFGPKVDAKRRWHEEFRDFRGEYFGEEVIRRIMLGTF 322 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 LS+ Y +Y +A+ + +++DF ++ VDV+ PT P A+ LG++ S + Sbjct: 323 ALSAGYYGKYYAKAQVAKQNVRKDFLRVLKE-VDVLAGPTMPNIAYKLGEK---SDPLEM 378 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +D+ TV N+AG+PAISVP E MP+GLQ+IG+ F +ET+ E+EA Sbjct: 379 YLSDILTVPANLAGVPAISVPCGKVE-NMPVGLQIIGKHFDDETVIDTAAAYEQEA 433 >gi|145348025|ref|XP_001418458.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578687|gb|ABO96751.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 539 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 175/443 (39%), Positives = 254/443 (57%), Gaps = 30/443 (6%) Query: 65 NGDARD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +G+AR L+G+P KD T A S IL+G+ E+T +L G V++G Sbjct: 102 DGEARRRASALDGVPFAAKDNLCANVGTTSAGSRILEGYESPIEATAIARLRALGGVLIG 161 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEF MGS TS ++P S SSGGS+AAV ++G+DT Sbjct: 162 KTNMDEFGMGSHTRTSGQ-TTLNPTSSDGERSSGG---SSGGSAAAVVNGSAFYALGSDT 217 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA++ G VG+KPTYGR SR G++S+ SLD G++ RTV D+ ++L AI G D Sbjct: 218 GGSVRLPAAYCGAVGLKPTYGRVSRFGLVSYCSSLDTVGVLARTVSDAGVVLAAIQGEDA 277 Query: 241 CDATCV---------NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 DAT V L D S++G+ VG+P+EY + L+ + W + + Sbjct: 278 LDATTVARCEDLDAAALEFVDETTPKAASLKGLRVGVPEEYAVSELTQEVYDAWNEMVRA 337 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG-----LRVE---GKDI 343 ++ GA+IV +++PHT+ ALP YY+++PAEASSNLARYDG+RYG L E ++ Sbjct: 338 MEALGAEIVRVNMPHTEAALPCYYVLAPAEASSNLARYDGMRYGDLTRDLSREEYLAEEF 397 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---EQG 400 RS+GFG EV+ R+ +G + LSS ++ +A+K+R L+ DFT F G Sbjct: 398 QSAIAKARSLGFGDEVRRRVTVGAFALSSARAAEYFEKAQKVRRLVSDDFTNVFGGEGGG 457 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPL 459 VDV+LTP++ ++A L E S + + DV TV ++AGLPA+S+PA +P+ Sbjct: 458 VDVLLTPSSVSTAPKLSDVEALSPAQTYA-ADVMTVPASLAGLPAMSMPAGRSRASGLPI 516 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 G+Q+I FRE L VG +E+ Sbjct: 517 GMQMIAPKFREARLVRVGSTLER 539 >gi|312149553|gb|ADQ29624.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi N40] Length = 481 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 172/452 (38%), Positives = 260/452 (57%), Gaps = 14/452 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + NG DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNGVTEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L + GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G + ++ D A++LK G D+ D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFSHSIEDIALILKHTCGSDKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + L G I E+S+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFAKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDF 393 R+ EG + + Y RS +EVK RI++G Y+LS R +Y +A +I + LI F Sbjct: 329 KRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSERYDSKYYAKACEILQNLIIPKF 388 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 389 NKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKD 445 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 446 EEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|326432390|gb|EGD77960.1| hypothetical protein PTSG_09594 [Salpingoeca sp. ATCC 50818] Length = 1523 Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 167/406 (41%), Positives = 240/406 (59%), Gaps = 15/406 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A S +L F P ++TV K GA + GK ++DEF MG Sbjct: 19 LAGFTVMVKDNIAVANERMTCGSSMLRSFVPTSDATVVSKCRSEGAEITGKTSLDEFGMG 78 Query: 131 SSNETS-YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S S +G I+PWR+ D PGGSSGGS+ AVA A++GTDTGGS+R PAS Sbjct: 79 SYGAFSPIHGLTINPWRATDGL--CVPGGSSGGSAVAVALGQARAALGTDTGGSVRLPAS 136 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR+G+ ++A SLD G++ TV D+A ++ A+AG+D DA V P Sbjct: 137 FCGVVGFKPSYGLLSRMGMTAYASSLDTVGVLASTVDDAATMVDAMAGHDPRDAASVQAP 196 Query: 250 ---VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +P D ++GM VG+P+E ++ LS + W + L+ +GA + ISLP+ Sbjct: 197 GSRLPLGSEYGD--VEGMVVGLPRECFIEELSDDVAAAWTEAADALQASGATVRYISLPN 254 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR----VEGKDILEMYENTRSIGFGQEVKHR 362 + ALP Y +++PAEASSNLARY G+ YG R ++E++R G G EV R Sbjct: 255 LKNALPCYCVLAPAEASSNLARYTGMFYGERAGSAASHASYRRLFESSRQSGLGPEVTRR 314 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--E 420 I+ GT+ L+ Y+S Y++A+++R LI+ DF A + GVDV+L P T + A PL + Sbjct: 315 ILTGTFTLTRASYESFYVQAQRVRRLIQADFASALQNGVDVVLMPVTSSDA-PLITDALS 373 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 N+ + DVFTV ++AGLPA++VP + + MP+GLQL+ Sbjct: 374 PNADVLQQFATDVFTVGPSLAGLPAMAVPCRVSSRNMPIGLQLVAN 419 >gi|216264145|ref|ZP_03436137.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi 156a] gi|215980618|gb|EEC21425.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi 156a] Length = 482 Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 178/490 (36%), Positives = 282/490 (57%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L+ + +++ ++ + ++ +++ +Y E N +N YIE + A+ D Sbjct: 1 MLDLSNLTLTKIQELVLTRKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYD 58 Query: 61 KRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA++ Sbjct: 59 DCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAIL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G+ NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+ Sbjct: 119 IGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G Sbjct: 174 DTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGS 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T V++ D+ +S+QG + + KE D + + ++ + L G Sbjct: 234 DKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSEDLMDKNVANSFTKFKLDLLSKGIN 292 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 I E+S+ + L YYIISP EASSNLARY G+ YG R+ EG + + Y RS + Sbjct: 293 IKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYGKRISEGLSLNDFYFKHRSNFLSE 352 Query: 358 EVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 EVK RI++G Y+LS R YDS +Y +A +I + LI F + FE D I+TPT+ F Sbjct: 353 EVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFR 410 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG + ++ M Y+D+ TV N+ G PAIS+P + E+ + +G+Q+IG+ ++ L S Sbjct: 411 LGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDEEGLSIGMQIIGRSKKDFELLS 468 Query: 476 VGQIIEKEAG 485 + + +E G Sbjct: 469 FSKNVIRELG 478 >gi|15594687|ref|NP_212476.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Borrelia burgdorferi B31] gi|6225412|sp|O51317|GATA_BORBU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2688236|gb|AAC66715.1| glu-tRNA amidotransferase, subunit A (gluA) [Borrelia burgdorferi B31] Length = 496 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 174/453 (38%), Positives = 263/453 (58%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + N + DL G+ I +KD + + S I Sbjct: 51 NKDINGYIEFF-DDSLEIAKRYDDCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEI 109 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L + GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 110 LKGYISPYDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 164 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 165 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 224 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G + ++ D A++LK G D+ D+T V++ D+ +S+QG + + KE D Sbjct: 225 DQIGFFSHSIEDIALILKHTCGSDKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSED 283 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + L G I E+S+ + L YYIISP EASSNLARY G+ YG Sbjct: 284 LMDKNVANSFAKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYG 343 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ EG + + Y RS +EVK RI++G Y+LS R YDS +Y +A +I + LI Sbjct: 344 KRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPK 402 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 403 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 459 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 460 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 492 >gi|312147791|gb|ADQ30450.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi JD1] Length = 481 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 174/453 (38%), Positives = 263/453 (58%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + N + DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L + GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G + ++ D A++LK G D+ D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFSHSIEDIALILKHTCGSDKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + L G I E+S+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFAKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ EG + + Y RS +EVK RI++G Y+LS R YDS +Y +A +I + LI Sbjct: 329 KRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|307297230|ref|ZP_07577036.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306916490|gb|EFN46872.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 466 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 180/468 (38%), Positives = 280/468 (59%), Gaps = 35/468 (7%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 S+ IS + Y + I+ N+++NA+++V R +EE +G P Sbjct: 11 SEIISLGDTYKFYRERIDKYNNELNAFLQV-----RTFSEER------------QGFPYA 53 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD G T S IL+ + Y++TVTQKL G +LGK NMDEFAMGSS E S Sbjct: 54 IKDNILAVGTRTTCASRILENYDSPYDATVTQKLNSKGGQLLGKTNMDEFAMGSSTENSA 113 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +GP +PW PGGSSGGS+AAVA L ++G+DTGGS+RQPAS G VG K Sbjct: 114 FGPSRNPWDL-----NRIPGGSSGGSAAAVAAGLAPFALGSDTGGSVRQPASMCGIVGFK 168 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYG SR G+++FA SLDQ G +TR +D+A ++ I+G+D D+ + + ++ +L Sbjct: 169 PTYGLVSRYGLVAFASSLDQIGPMTRCSQDAADVMSMISGHDSRDSNTIRHAL-SFDTSL 227 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-ISWLKD---AGAKIVEISLPHTQYALPA 313 +++G+ +P E L Y P +D+ ++ +S +D +GA + IS+P +YA+ Sbjct: 228 GGNLKGLKFAVPSEM-LSY--PGLDEEVKEKFLSITRDIERSGADVEVISVPSVEYAVAT 284 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YY+I+PAEASSNL+RYDG+R+G R + +D + +R GFG+EVK RI++GT+ LS+ Sbjct: 285 YYLIAPAEASSNLSRYDGIRFGPRQQSEDYEGLTSKSRDRGFGKEVKRRILLGTFTLSAT 344 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YD++Y +A K R ++ + ++ ++ D IL P++P A +G+ + + + D+ Sbjct: 345 YYDAYYRKALKTRRVMAGELSKVLDE-YDFILNPSSPVVAPRIGEIND---PLAYYLMDI 400 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +T+ N+AGLP+ISVPA MP+G+ + G+ F + ++ + IE Sbjct: 401 YTIPANVAGLPSISVPAGFV-NGMPVGVLITGKRFSDVSILDAAKGIE 447 >gi|218249200|ref|YP_002374862.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi ZS7] gi|226321659|ref|ZP_03797185.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi Bol26] gi|218164388|gb|ACK74449.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi ZS7] gi|226232848|gb|EEH31601.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi Bol26] Length = 482 Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 178/490 (36%), Positives = 282/490 (57%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L+ + +++ ++ + ++ +++ +Y E N +N YIE + A+ D Sbjct: 1 MLDLSNLTLTKIQELVLTRKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYD 58 Query: 61 KRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA++ Sbjct: 59 DCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAIL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G+ NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+ Sbjct: 119 IGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G Sbjct: 174 DTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGS 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T V++ D+ +S+QG + + KE D + + ++ + L G Sbjct: 234 DKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGEDLMDKNVANSFAKFKLDLLSKGIN 292 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 I E+S+ + L YYIISP EASSNLARY G+ YG R+ EG + + Y RS + Sbjct: 293 IKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYGKRISEGLSLNDFYFKHRSNFLSE 352 Query: 358 EVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 EVK RI++G Y+LS R YDS +Y +A +I + LI F + FE D I+TPT+ F Sbjct: 353 EVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFR 410 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG + ++ M Y+D+ TV N+ G PAIS+P + E+ + +G+Q+IG+ ++ L S Sbjct: 411 LGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDEEGLSIGMQIIGRSKKDFELLS 468 Query: 476 VGQIIEKEAG 485 + + +E G Sbjct: 469 FSKNVIRELG 478 >gi|89898522|ref|YP_515632.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila felis Fe/C-56] gi|109829673|sp|Q253Q1|GATA_CHLFF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|89331894|dbj|BAE81487.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila felis Fe/C-56] Length = 491 Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 176/477 (36%), Positives = 281/477 (58%), Gaps = 13/477 (2%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR- 69 E R+ + S + SA + + + IE +S++ A++ + ++A A D + G+ Sbjct: 8 ELRNSVVSGESSATAIAEYFYNRIETEDSRIGAFLSLCKERAYEKAAIVDAKRERGEPLG 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PIGIKD G+ T S +L+ + +++TV +++ ++LGKLNMDEFAM Sbjct: 68 KLAGVPIGIKDNIHVTGLRTTCASKMLENYIAPFDATVIKRIEAEDGIILGKLNMDEFAM 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS+ + S + P +PW PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+ Sbjct: 128 GSTTQYSAFHPTKNPWDL-----SCVPGGSSGGSAAAVSARFCPMALGSDTGGSIRQPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+YG SR G+++F SLDQ G +T V D A+ + AG D+ DAT Sbjct: 183 FCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDVFAGKDKNDATTQEFF 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ AL + + +G+P + L+ L I + + ++ L+ G+ IV+I L + Sbjct: 243 TGSFQDALSLEVPSL-IGVPMGF-LEGLRDDIKENFFASLNVLERQGSHIVDIDLDILHH 300 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ YYI++ AEA++NLAR+DG+RYG R +E + ++Y +R GFG+EV RI++G Y Sbjct: 301 AVSVYYIVASAEAATNLARFDGIRYGYRSLEAHSMEDVYTLSRVQGFGKEVMRRILLGNY 360 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLS+ +Y + IR I + F +A+E+ +VI P AF G+ + + Sbjct: 361 VLSAERQSVYYKKGTAIRAKIIQAFQKAYEK-CEVIAMPVCSCPAFADGEILD---PISL 416 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 D++TVA+N+A LPAI+VP+ ++ +PLGLQ+IGQ R++ + VG ++ +G Sbjct: 417 YLQDIYTVAMNLAYLPAIAVPSGFSKEGLPLGLQIIGQQGRDQQVCQVGYSFQEHSG 473 >gi|195941305|ref|ZP_03086687.1| Glu-tRNA amidotransferase, subunit A (gluA) [Borrelia burgdorferi 80a] Length = 481 Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 180/488 (36%), Positives = 280/488 (57%), Gaps = 17/488 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + ++ +++ SY E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTRKCKIYDILLSYKNNYE-LNKDINGYIEFF-DDSLEIAKRYDDC 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + NG DL G+ I +KD + K S IL G+ Y++TV ++L D GA+++G Sbjct: 60 LKNGVTEDLPLIGMLIAVKDNISIKDKSLTCASEILKGYISPYDATVIKRLKDKGAIIIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 RTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G ++ D A++L+ G+DE Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFAHSIEDIALILRHTCGFDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ +S+QG + + KE D + + ++ + S L G I Sbjct: 235 MDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGEDLMDKNVANSFAKFKSDLLLKGVNIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 EIS+ + L YYIISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EISIEEINFILSIYYIISPVEASSNLARYTGLCYGKRMTEILGLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 K RI++G Y+L S YDS +Y +A +I + LI F + FE D I+TPT+ F LG Sbjct: 354 KRRIVLGNYLL-SEGYDSKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRLG 411 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ M Y+D+ TV N+ G PAIS+P + E+ + +G+Q++G+ ++ L S Sbjct: 412 LDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDEEGLSIGMQIVGRSKKDFELLSFS 469 Query: 478 QIIEKEAG 485 + + +E G Sbjct: 470 KNVIRELG 477 >gi|223889044|ref|ZP_03623635.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi 64b] gi|223885860|gb|EEF56959.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi 64b] Length = 482 Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 178/490 (36%), Positives = 282/490 (57%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L+ + +++ ++ + ++ +++ +Y E N +N YIE + A+ D Sbjct: 1 MLDLSNLTLTKIQELVLARKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYD 58 Query: 61 KRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA++ Sbjct: 59 DCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAIL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G+ NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+ Sbjct: 119 IGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G Sbjct: 174 DTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGS 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T V++ D+ +S+QG + + KE D + + ++ + L G Sbjct: 234 DKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGEDLMDKNVANSFAKFKLDLLSKGIN 292 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 I E+S+ + L YYIISP EASSNLARY G+ YG R+ EG + + Y RS + Sbjct: 293 IKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYGKRISEGLSLNDFYFKHRSNFLSE 352 Query: 358 EVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 EVK RI++G Y+LS R YDS +Y +A +I + LI F + FE D I+TPT+ F Sbjct: 353 EVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFR 410 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG + ++ M Y+D+ TV N+ G PAIS+P + E+ + +G+Q+IG+ ++ L S Sbjct: 411 LGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDEEGLSIGMQIIGRSKKDFELLS 468 Query: 476 VGQIIEKEAG 485 + + +E G Sbjct: 469 FSKNVIRELG 478 >gi|169849095|ref|XP_001831251.1| glutamyl-tRNA amidotransferase subunit A [Coprinopsis cinerea okayama7#130] gi|116507519|gb|EAU90414.1| glutamyl-tRNA amidotransferase subunit A [Coprinopsis cinerea okayama7#130] Length = 510 Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 176/459 (38%), Positives = 272/459 (59%), Gaps = 46/459 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ I +KD T+ T S++L F +++TV ++ +NG ++GK N DEF MG Sbjct: 51 LSGLRIAVKDNIVTRDFPTTCSSNVLKNFVSPFDATVVHRIRENGGQIIGKANCDEFGMG 110 Query: 131 SSNETSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 S N + +GPVI+P+ + + DK + GGSSGGS+AAVA +C A++GTDTGGSIR P Sbjct: 111 SLNTYTIHGPVINPFPLSKVGLNNDKRSAGGSSGGSAAAVAADICDAALGTDTGGSIRLP 170 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G VG+KP+YG SR G++S+A SLD G++ R V ++ + + I+ YD D T Sbjct: 171 ASYCGIVGLKPSYGLVSRWGVVSYADSLDCVGVLARDVETTSCVFERISEYDPNDPTSA- 229 Query: 248 LP-------------VPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 LP + + AL + S+ G+ +GIP+E+ LS + ++Q + LK Sbjct: 230 LPETREKADALSSQRLDELSSALAEGSLHGLRIGIPQEFFPSELSNHVLNRFRQSVQLLK 289 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD------ILEMY 347 + GA+I+ +SLP T Y+L AYY+++ AEASSN+ARYDG++YG R+ +D + +Y Sbjct: 290 ERGAQIIPVSLPSTSYSLSAYYVLASAEASSNMARYDGIQYGERIPTQDPSDLKKVSTVY 349 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------- 397 TRS FG EV+ RI++GTY L++ +D+++L+A+++R LIK DF F Sbjct: 350 ARTRSSTFGPEVQRRILLGTYALTADAFDNYFLQAQRVRQLIKDDFDRVFAMPNVRYAQP 409 Query: 398 -------EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA 450 Q VDV+L P+ SA L + E + S+ DV TV ++AGLPA+S+P Sbjct: 410 SNTPAQASQKVDVLLHPSAIRSAPRLDEVETAASSLDAYVQDVLTVPASLAGLPALSIPC 469 Query: 451 ALC-----EKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 E + P+G+ ++GQ + + +VG+ +E A Sbjct: 470 PPSSSETEEVEWPIGVSIVGQWGSDHFVLAVGKFLESAA 508 >gi|330895290|gb|EGH27628.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. japonica str. M301072PT] Length = 308 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 142/296 (47%), Positives = 206/296 (69%), Gaps = 5/296 (1%) Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 1 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDS 60 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+S Sbjct: 61 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVS 120 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 LP+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 121 LPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 180 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + N+ Sbjct: 181 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAD-VDVILGPTTPNPAWKIGAKTND 239 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 240 --PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 292 >gi|15790011|ref|NP_279835.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halobacterium sp. NRC-1] gi|169235734|ref|YP_001688934.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halobacterium salinarum R1] gi|39931634|sp|Q9HR43|GATA_HALSA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|10580435|gb|AAG19315.1| Glu-tRNA amidotransferase [Halobacterium sp. NRC-1] gi|167726800|emb|CAP13586.1| aspartyl-tRNA(Asn) amidotransferase subunit A [Halobacterium salinarum R1] Length = 423 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 174/415 (41%), Positives = 256/415 (61%), Gaps = 14/415 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD +TKG+ T S +L + P Y +TV + L G ++GK NMDEF MG Sbjct: 20 LDGTTVAVKDNISTKGVPTTCGSKMLADYEPPYNATVVEDLLAAGGTIVGKTNMDEFGMG 79 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ETSY+GP +P +D T PGGSSGGS+AAVA ++G+DTGGS+R PA++ Sbjct: 80 TTTETSYFGPTKNP---VDET--RVPGGSSGGSAAAVANGDADLALGSDTGGSVRAPAAY 134 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYG SR G++++A SL+Q G I TV +A LL IAG DE D T + Sbjct: 135 CGVVGLKPTYGLVSRYGLVAYANSLEQIGPIAPTVEGAAELLDVIAGPDEHDGTTRDAGA 194 Query: 251 -PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY A + G+T+G+P+E D + + ++ ++ L+ GA V+++LP +Y Sbjct: 195 DADYASAATGDVDGLTIGVPQELT-DGADDRVVERFEAALADLRAEGATTVDVALPSCEY 253 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A+ AYY+I+ +EASSNLAR+DGVRYG +G + E + + R+ GFG EV RI++GT Sbjct: 254 AVAAYYVIAMSEASSNLARFDGVRYGTGGGFDG-NWNETFADARADGFGDEVTRRILLGT 312 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 Y LS+ +D +Y +A++ R +K+DF E F VDV+ +PT P LG+ ++ M Sbjct: 313 YALSAGYHDKYYKQAQEARAWVKQDFDETFAD-VDVVASPTMPVLPPKLGESLDDPVQM- 370 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D T N+A LPAISVPA + +P+G+QL+G F EET+ + +E+ Sbjct: 371 -YLADANTTPANLANLPAISVPAGDAD-GLPVGVQLVGPKFGEETIINAAAAVEQ 423 >gi|225550232|ref|ZP_03771192.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi 118a] gi|225369344|gb|EEG98797.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi 118a] Length = 481 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 175/453 (38%), Positives = 263/453 (58%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + N + DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L + GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G ++ D A++L+ G+DE D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFAHSIEDIALILRHTCGFDEMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + S L G I EIS+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFAKFKSDLLLKGVNIKEISIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ E + + Y RS +EVK RI++G Y+LS R YDS +Y +A +I + LI Sbjct: 329 KRMTEILGLNDFYFKHRSNFLSEEVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|258577669|ref|XP_002543016.1| predicted protein [Uncinocarpus reesii 1704] gi|237903282|gb|EEP77683.1| predicted protein [Uncinocarpus reesii 1704] Length = 504 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 177/472 (37%), Positives = 275/472 (58%), Gaps = 54/472 (11%) Query: 57 EESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 +++D R G+++ L+G + +KD T+ T S +L+ F + +TV + L ++G Sbjct: 38 KDADARRKRGESKSPLDGKLVAVKDNICTRDAPTTCGSRMLENFTSPFNATVVKLLEESG 97 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A+M GK N+DEF MGS + S++G V S + D + GGSSGGS+ AV+ C A+ Sbjct: 98 AIMAGKTNLDEFGMGSHSTYSHFGLVKGA--SAGTQDHSSVGGSSGGSAIAVSTEQCYAA 155 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDTGGS+R PA++TGTVG KP+YG SR G++++A SLD G+I + + + + Sbjct: 156 LGTDTGGSVRLPAAYTGTVGFKPSYGLISRWGVVAYANSLDTVGVIGQKISTIREVFGVL 215 Query: 236 AGYDECDATCVNLPVPDYERALDQSI--------QGMTVGIPKEYRLDYLSPTIDKTWQQ 287 YD+ D T ++ Y +D++ + +G+P+EY + LSP + + WQ+ Sbjct: 216 NHYDQQDPTSISQATRAY---IDEATGIATKTRRAKLHIGVPQEYNIQELSPLVREAWQR 272 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-- 345 + +L+ G I +SLP T+ AL AYY+++PAEASSNLA+YDGVRYG R D + Sbjct: 273 SLQYLQSQGHTIRPVSLPATKQALSAYYVLAPAEASSNLAKYDGVRYGTR--SPDTADNA 330 Query: 346 ---MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF----- 397 +Y NTR +GFG EVK RI++G + LS+ D+++++A+KIR L++ DF F Sbjct: 331 GGYLYANTRGLGFGPEVKRRIVLGAFSLSAEAMDNYFIQAQKIRRLVQSDFNAVFDLHNP 390 Query: 398 -------------------EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 ++ VDV++ PT P+S L EN + + NDVFTV Sbjct: 391 LLQMEPLGQAKGLKTEQAKQEKVDVLVCPTAPSSPPSLRSLENLAPIEAYT-NDVFTVPA 449 Query: 439 NMAGLPAISVP----AALCEK----KMPLGLQLIGQPFREETLFSVGQIIEK 482 ++AGLPA+SVP A+CE P+G+Q+IGQ ++ + VG I+E+ Sbjct: 450 SLAGLPALSVPISAGNAMCEPGEPGAGPVGIQIIGQYGDDQLVLDVGGILEQ 501 >gi|302913549|ref|XP_003050949.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731887|gb|EEU45236.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 511 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 181/454 (39%), Positives = 258/454 (56%), Gaps = 44/454 (9%) Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 +D + + +KD AT TQ S IL +E+TV ++L + GA ++GK NMDEF Sbjct: 62 KDAKPFKLAVKDNIATADFPTQCASQILSSHPSPFEATVVRQLRERGASIVGKTNMDEFG 121 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MGS + S +G V +P D D G S G + A G A +GTDTGGSIR PA Sbjct: 122 MGSHSTNSIHGAVRNPLAEDD--DVSAGGSSGGSAVAVRLGDADVA-LGTDTGGSIRLPA 178 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT-CVN 247 ++TGTVG KP+YG SR G++ +A SLD G + V+ L+ Y E D++ + Sbjct: 179 AYTGTVGYKPSYGMISRFGVVPYANSLDTVGFLASEVKPIHDLVFKTGLYQEHDSSDPTS 238 Query: 248 LPVPDYERALDQS------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 LP+ +R + + + + +GIP EY ++ L P+I W S L+ GA +V Sbjct: 239 LPIASRKRCAETTPSTLPDLSKLNIGIPLEYNIEELDPSIRDAWVAAASALEAQGATLVP 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQEV 359 ISLP T AL AYY+++PAEASSNLA+YDGVRYG R EG D + +Y +TR GFG EV Sbjct: 299 ISLPSTTEALCAYYVLAPAEASSNLAKYDGVRYGKRGEGSDAVGETLYSDTRGAGFGDEV 358 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------------------- 397 K RI++GTY LSS D+++++A+K+R ++++DF F Sbjct: 359 KRRILLGTYSLSSEAMDNYFIQAQKVRRMVQQDFDRVFRLDNPLYEPAQFDLSDMAEATG 418 Query: 398 ---EQG---VDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPA 450 ++G VD IL PT PT FP +E S +Y NDVFTV ++AGLPA+SVPA Sbjct: 419 MEDKRGPLQVDFILCPTAPT--FPPRLDEIKEQSSVDVYMNDVFTVPASLAGLPAVSVPA 476 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + + P GLQ+IGQ + ++ + + + + KEA Sbjct: 477 KVEGSRFPAGLQVIGQYWDDQRVLLLAEKL-KEA 509 >gi|221217739|ref|ZP_03589207.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi 72a] gi|221192416|gb|EEE18635.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia burgdorferi 72a] Length = 481 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 176/453 (38%), Positives = 262/453 (57%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + NG DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNGVTEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L D GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKDKGAIIIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G ++ D A++L+ G+DE D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFAHSIEDIALILRHTCGFDEMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + S L G I EIS+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFAKFKSDLLLKGVNIKEISIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ E + + Y RS +EVK RI++G Y+L S YDS +Y +A +I + LI Sbjct: 329 KRMTEILGLNDFYFKHRSNFLSEEVKRRIVLGNYLL-SEGYDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|225549164|ref|ZP_03770139.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi 94a] gi|225370390|gb|EEG99828.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia burgdorferi 94a] Length = 481 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 176/453 (38%), Positives = 262/453 (57%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + NG DL G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNGVTEDLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L D GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKDKGAIIIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G ++ D A++L+ G+DE D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFFAHSIEDIALILRHTCGFDEMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + S L G I EIS+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFAKFKSDLLLKGVNIKEISIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ E + + Y RS +EVK RI++G Y+LS YDS +Y +A +I + LI Sbjct: 329 KRMTEILGLNDFYFKHRSNFLSEEVKRRIVLGNYLLSEG-YDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|257051174|ref|YP_003129007.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halorhabdus utahensis DSM 12940] gi|256689937|gb|ACV10274.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halorhabdus utahensis DSM 12940] Length = 434 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 182/434 (41%), Positives = 255/434 (58%), Gaps = 23/434 (5%) Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I GD L G + +KD +T G+ T A S +L + P Y++TV ++L D GA + Sbjct: 9 EETIEGDGDGPLAGRTVAVKDNISTDGVRTTAGSAMLAEYVPPYDATVVERLTDAGATIP 68 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEF MG++ ETS +GP +P + PGGSSGGS+AAVA ++G+D Sbjct: 69 GKTNMDEFGMGTTTETSAFGPTENP-----AAKGHVPGGSSGGSAAAVAAGEADLALGSD 123 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA+FTGTVGIKPTYG SR G+I++A SL+Q G I +V ++A LL+ IA D Sbjct: 124 TGGSVRCPAAFTGTVGIKPTYGLVSRYGLIAYANSLEQIGPIAPSVEEAAELLEVIAAPD 183 Query: 240 ECDATC------VNLPVPD------YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 E DAT + PD + A D + G+ +G+P E LD + +T+ Sbjct: 184 ENDATTRAAHEEIGGENPDDMREYSFADAADGDVDGLEIGVPTEL-LDGADEDVVETFWD 242 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEM 346 I L+ GA E+ LP ++A+ AYY+I+ +EASSNLAR+DGVRYG + + + E Sbjct: 243 AIDELESQGASYHEVDLPSVEHAVEAYYVIAMSEASSNLARFDGVRYGPTPDYEGNWNEE 302 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 Y R GFG+EVK RI++GTY LS+ +D +Y +A+ R +K+DF A E DV+ + Sbjct: 303 YAKVREEGFGEEVKRRILLGTYALSAGYHDKYYKKAQDARAWVKQDFDSALED-ADVLAS 361 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PT P P+ + E+ + D T VN+A LPAISVPA +P+GLQLIG Sbjct: 362 PTMPVP--PMERGESLDDPLTMYLADANTTPVNLANLPAISVPAGETSDGLPVGLQLIGP 419 Query: 467 PFREETLFSVGQII 480 F E + G + Sbjct: 420 AFGERAIIRAGSAL 433 >gi|300711022|ref|YP_003736836.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus jeotgali B3] gi|299124705|gb|ADJ15044.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus jeotgali B3] Length = 421 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 179/421 (42%), Positives = 260/421 (61%), Gaps = 13/421 (3%) Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I GD+ L G + +KD +T+G+ T S +L + P Y++TV ++L GA ++GK Sbjct: 11 IEGDSEGPLSGATVAVKDNISTEGVRTTCGSAMLTEYVPPYDATVIERLKAAGAEIVGKA 70 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMDEF MGS+ ETS +GP +P + + PGGSSGGS+AAVA ++GTDTGG Sbjct: 71 NMDEFGMGSTTETSAFGPAPNP-----AAEGRVPGGSSGGSAAAVAAGEADVALGTDTGG 125 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA+F G VGIKPTYG SR G+I++A SL+Q G + TV D+A LL I+G DE D Sbjct: 126 SVRNPAAFCGVVGIKPTYGLVSRYGLIAYANSLEQIGPLAPTVEDAARLLDVISGPDERD 185 Query: 243 ATC-VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT DY + D ++G+++G+P E ++ + +T+ I+ L+ GA E Sbjct: 186 ATTRAEGKNSDYASSADGDVEGLSIGVPTEL-VEGADEGVRETFWDAIATLESRGASYHE 244 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVK 360 +SLP ++A+ AYY+I+ +EASSNLAR+DGVRYG + + D E++ R GFG+EVK Sbjct: 245 VSLPSIEHAVAAYYVIAMSEASSNLARFDGVRYGPATDREGDWNEVFSAVRERGFGEEVK 304 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RI++GTY LS+ ++ +Y +A+ R +K+DF +A + DV+ +PT P F G+ Sbjct: 305 RRILLGTYALSAGYHEKYYKKAQDARAWVKQDFDDALAE-ADVLASPTMPVPPFEAGESL 363 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + M +D TV VN+A LPAISVPA + +P+GLQLIG F E + + Sbjct: 364 EDPLQM--YLSDANTVPVNLANLPAISVPAGETD-GLPVGLQLIGPEFGERRIIRAASAL 420 Query: 481 E 481 E Sbjct: 421 E 421 >gi|170086518|ref|XP_001874482.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649682|gb|EDR13923.1| predicted protein [Laccaria bicolor S238N-H82] Length = 465 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 188/466 (40%), Positives = 266/466 (57%), Gaps = 58/466 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIPI IKD AT T S +L F +++TV + L GA ++GK N+DEF MG Sbjct: 3 LAGIPIAIKDNIATTDSPTTCSSAMLQNFVSPFDATVVKLLRKAGADIIGKTNLDEFGMG 62 Query: 131 SSNETSYYGPVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S N S +GPV++P+ S S +K GGSSGGS+AAVA +C A++GTDTGGSI Sbjct: 63 SLNVHSVHGPVVNPFHSYSSGTTWVEREKRCAGGSSGGSAAAVAAGMCVAALGTDTGGSI 122 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS+ G VG KP+YG SR G++SFA SLD ++ V D+ + I+ YDE D T Sbjct: 123 RLPASYCGIVGFKPSYGLVSRWGVVSFADSLDCVAVMAANVSDAKRIFNFISVYDEKDPT 182 Query: 245 CVNLPVPDYERALDQSIQ-----------------GMTVGIPKEYRLDYLSPTIDKTWQQ 287 D + +S+Q G+ +GIP+EY LSPTI ++ Sbjct: 183 AAT---DDVRQMASKSVQEGLHRLRRNRRPGTRLDGIRIGIPQEYFPSELSPTILGPVRR 239 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL--RV---EGKD 342 IS LK GA +V ++LP T YAL AYY+++ AEASSNLARYDG++YGL RV G D Sbjct: 240 AISSLKSQGAIVVPVTLPSTSYALSAYYVLASAEASSNLARYDGIQYGLWTRVSPPHGAD 299 Query: 343 ILE---MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-- 397 + + +Y TRS GFG EV+ RI++GTY L++ +D+++L+A+++R L+K DF F Sbjct: 300 LRKTSRIYAYTRSAGFGHEVQKRILLGTYALTADAFDNYFLQAQRVRQLVKNDFNSVFSI 359 Query: 398 --------------EQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIYNDVFTVAVNM 440 E VDV++ P+ +A PL E N+ S+ DV TV ++ Sbjct: 360 PDYYSPSTHTKDPLETTVDVLVHPSAIRTAPPLPTTETDVNDDASLDAYVQDVLTVPASL 419 Query: 441 AGLPAISVPAAL-----CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 A LPA++VP + P+G+ ++GQ +E + VG+ +E Sbjct: 420 ARLPALNVPIPQGQVDELDDGWPIGISVVGQWGTDELVLEVGEALE 465 >gi|145228313|ref|XP_001388465.1| glutamyl-tRNA amidotransferase, A subunit [Aspergillus niger CBS 513.88] gi|134054551|emb|CAK36864.1| unnamed protein product [Aspergillus niger] Length = 504 Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 185/499 (37%), Positives = 278/499 (55%), Gaps = 60/499 (12%) Query: 33 AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP--------IGIKDCFAT 84 A + S++ +NA I + Q + +R+ + DAR G P + +KD T Sbjct: 12 ANQGSHAALNALITTLHQSGQWL-----ERVRDADARRTRGTPKSEIDGRLVAVKDNMCT 66 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 + + T S+ LD F + +TV Q+L D GAV+ GK N+DEF MGS + S +GPV S Sbjct: 67 RDLPTTCASNALDKFVSPFNATVVQQLEDAGAVVAGKANLDEFGMGSHSIHSNFGPVRSS 126 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 R D+ + + GGSSGGS+ AVA C A++GTDTGGS+R PA++TGTVG KP+YG S Sbjct: 127 RRGQDA-EYLSAGGSSGGSAVAVATAQCYAALGTDTGGSVRLPAAYTGTVGFKPSYGLVS 185 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ-- 262 R G++++A SLD G++ R V + + +D D T ++ P +D ++ Sbjct: 186 RWGVVAYANSLDTVGVLGRDVASVRHVFGVVNQHDSRDPTNLS---PSSRSRIDSHLKMS 242 Query: 263 --------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + +G+P EY + LSP+ W + +++L+ G I +SLP T+ AL AY Sbjct: 243 ALASRTSSPLRIGVPLEYNISELSPSARHAWSRSLAYLQRQGHSIQTVSLPTTKLALSAY 302 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKD-----ILEMYENTRSIGFGQEVKHRIMIGTYV 369 Y+++PAEASSNLA+YDGVRYG R E D +Y TR GFG EVK RI++G + Sbjct: 303 YVLAPAEASSNLAKYDGVRYGSRPEAPDGNASSERYLYAKTRGDGFGSEVKRRILLGAFS 362 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAF------------------EQGVDVILTPTTPT 411 LS+ D+++++A+++R L++ DF AF + GVDV++ PT P+ Sbjct: 363 LSADAMDNYFIQAQRVRRLVQHDFNAAFRACQPLISSQLGSKSGSADTGVDVLICPTAPS 422 Query: 412 S----AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-----CEKKMPLGLQ 462 S + +G + S + NDVFTV ++AGLPAISVP E G+Q Sbjct: 423 SPPRISSLIGPDATTS-PLEAYTNDVFTVPASLAGLPAISVPVTTENADGAEDGDLAGIQ 481 Query: 463 LIGQPFREETLFSVGQIIE 481 +IGQ +E + V +++E Sbjct: 482 VIGQYGDDELVLKVAELLE 500 >gi|219851922|ref|YP_002466354.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosphaerula palustris E1-9c] gi|219546181|gb|ACL16631.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanosphaerula palustris E1-9c] Length = 433 Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 183/446 (41%), Positives = 262/446 (58%), Gaps = 22/446 (4%) Query: 40 QMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 Q NA+I + ++SD++ L G I +KD T GI T S IL+G+ Sbjct: 8 QFNAFI----TRCTTDRDKSDRQRTG----RLAGQYIAVKDNITTSGIMTTCGSAILNGY 59 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 P Y++ V K+ + GA++ GK NMDEF MG++ E S +GP +P + PGGS Sbjct: 60 IPPYDAHVITKIVNEGAIIAGKTNMDEFGMGTTTENSAFGPTRNPVNP-----ERVPGGS 114 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS+AAVA L ++GTDTGGSIR PASF G VG+KPTY R SR G+I++A SL+Q G Sbjct: 115 SGGSAAAVAAGLVPMALGTDTGGSIRCPASFCGIVGLKPTYSRVSRYGLIAYANSLEQIG 174 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + RTV + L++ IAGYD DAT + P Y I G +G+P+E+ + Sbjct: 175 PMARTVTGVSDLMQVIAGYDSRDATSTDHP---YHHTPSADISGKRIGVPEEFFGTGVDA 231 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + +T ++ I L+ GA+IV S+ YAL AYY+I +EASSNLARYDGVRYG+ V+ Sbjct: 232 HVAETVRKAIDRLEAGGAEIVPCSMKSMAYALAAYYVICTSEASSNLARYDGVRYGVPVD 291 Query: 340 GK-DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + R FG EV+ RI++GT+ LS+ Y +Y +A+ R ++ DF F+ Sbjct: 292 TTPQWHDAFRAVRGERFGPEVQRRILLGTFALSAGYYGKYYAKAQIARQQVRADFDRLFQ 351 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 + VD++ PT PT AF LG+ + + D+ TV N+AG+PAISVP + MP Sbjct: 352 E-VDLLAGPTMPTVAFRLGEMAD---PLSMYLADILTVPANLAGVPAISVPCGTVD-GMP 406 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEA 484 +GLQ++G+PF +E + E+ A Sbjct: 407 VGLQVMGRPFDDEGVVDAAYAYEQGA 432 >gi|237750582|ref|ZP_04581062.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter bilis ATCC 43879] gi|229373672|gb|EEO24063.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Helicobacter bilis ATCC 43879] Length = 447 Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 183/461 (39%), Positives = 274/461 (59%), Gaps = 33/461 (7%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATK 85 L + IQ I+ + ++NAYIE E+DK IPI IKD K Sbjct: 18 LKEQMIQDIK-AKQELNAYIET------PELNENDKG----------KIPILIKDNICVK 60 Query: 86 GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW 145 S IL G+ Y +T KL D+ G+ NMDEF MGS+ E S YG +P Sbjct: 61 DSKLTCASKILHGYVSPYSATAVTKLQDSNMCAFGRANMDEFGMGSTTEKSCYGRTKNPC 120 Query: 146 RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 + PGGSSGGS+AAVA + AS+G+DTGGSIRQPAS+ G VG+KPTYGR SR Sbjct: 121 DT-----SRVPGGSSGGSAAAVAAKIAIASLGSDTGGSIRQPASYCGVVGLKPTYGRVSR 175 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL-PVPDYERALDQSIQGM 264 G+++++ SL+Q G IT+ V D++ILL I+G + D+T NL P +++ + I + Sbjct: 176 YGLVAYSSSLEQIGPITQNVEDASILLDIISGVCKRDSTSANLAPTKTFDKLNPKRI--L 233 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 + I +++ + + K + I L+D G I++ + T + + AYYII+ AEAS+ Sbjct: 234 KIAILEDF-VKEADEAVQKAYYDTIKILEDMGHSIIKAQMLDTAHHISAYYIIAMAEASA 292 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 NLAR+DGVRYG R+EG+++ ++Y TR+ FG EV+ RI++G++VLSS YD++YL+A+K Sbjct: 293 NLARFDGVRYGSRIEGQNLQDLYFKTRA-QFGDEVQKRILLGSFVLSSGYYDAYYLKAQK 351 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 +R LI++ + F + D IL P P A ++ S+ +D++T+ VN+AGLP Sbjct: 352 VRELIRQQYASIFSE-CDTILLPVAPNVAPTFNATKS---SLEMYLSDIYTIGVNLAGLP 407 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 AIS+P + + +P+G+Q IG F E+T+ V +E+ G Sbjct: 408 AISLP--VVKSPLPIGMQFIGSAFSEQTILDVAFGLEQNLG 446 >gi|224533233|ref|ZP_03673833.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Borrelia burgdorferi WI91-23] gi|224511960|gb|EEF82361.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Borrelia burgdorferi WI91-23] Length = 481 Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 173/453 (38%), Positives = 263/453 (58%), Gaps = 16/453 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHI 95 N +N YIE + A+ D + N + L G+ I +KD + + S I Sbjct: 36 NKDINGYIEFF-DDSLEIAKRYDDCLKNCELEYLPLIGMLIAVKDNISIQDKSLTCASEI 94 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L G+ Y++TV ++L + GA+++G+ NMDEFAMGS+ E SYYG ++P ++ Sbjct: 95 LKGYISPYDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYV 149 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 GGSSGGS+A VA F S+G+DTGGS+R PASF+G +G KP+YG SR G+ S+A S Sbjct: 150 IGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSF 209 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 DQ G ++ ++ D A++LK G D+ D+T V++ D+ +S+QG + + KE D Sbjct: 210 DQIGFLSHSIEDIALILKHTCGSDKMDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSED 268 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + ++ + L G I E+S+ + L YYIISP EASSNLARY G+ YG Sbjct: 269 LMDKNVANSFTKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYG 328 Query: 336 LRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRD 392 R+ EG + + Y RS +EVK RI++G Y+LS R YDS +Y +A +I + LI Sbjct: 329 KRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSER-YDSKYYAKACEILQNLIIPK 387 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F + FE D I+TPT+ F LG + ++ M Y+D+ TV N+ G PAIS+P + Sbjct: 388 FNKLFES-CDFIITPTSFVKPFRLGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSK 444 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E+ + +G+Q+IG+ ++ L S + + +E G Sbjct: 445 DEEGLSIGMQIIGRSKKDFELLSFSKNVIRELG 477 >gi|295098963|emb|CBK88052.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Eubacterium cylindroides T2-87] Length = 458 Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 171/466 (36%), Positives = 265/466 (56%), Gaps = 23/466 (4%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 S+V V+SY + IE ++NA + ++ K N + L GIP+ +KD Sbjct: 5 SSVSAVESY-KRIEELQPKLNAAVTMIEPKD------------NPNQGKLSGIPVILKDN 51 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 TKGI T A S ILD + P Y++T+ +KL + GA+ + K +MDE MG +N+ +Y G V Sbjct: 52 INTKGIRTTASSRILDNYVPVYDATIVKKLNEAGAIFVCKASMDELGMGGTNKNAYTGAV 111 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +P+ D+ + GGSSGG + VA +IGTDTG SIR+PA++TG VG+KPTYG Sbjct: 112 HNPY----DLDRIS-GGSSGGCAVLVASDAAPLAIGTDTGDSIRKPAAYTGVVGVKPTYG 166 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R SR GII +A SLD G T ++D+A+ L+ +AG D+ D T PV +Y + L+ + Sbjct: 167 RISRYGIIPYASSLDHVGYFTTNIKDAALALEVLAGRDDKDMTSSFKPVEEYSKNLNGDL 226 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL--PAYYIISP 319 +G T+G+ K + + T+ + + LK+AGA I E+ +P L P Y I+ Sbjct: 227 KGKTIGVLKTVIDEIEDEYVKNTFYEFVKKLKEAGANIKEVEMPREYMELIPPVYKTIAN 286 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 AEA++N + DG+R+G+R +G+ + E+ N+R+ GF V+ R +IG+Y L + D + Sbjct: 287 AEATANHSNLDGLRFGMREDGESVEEVMTNSRTKGFSSYVRARFVIGSYSLFNENQDRLF 346 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 +A+KIR LI + + FE GVD IL A P+ ++ + + D N Sbjct: 347 RKAQKIRRLIVDAYKKCFE-GVDGILCMAALDIA-PMIEDSQDVRFKETSFADEHMQLAN 404 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +G P+I++P A + MPLG+ L +PF E+ +F + Q +E G Sbjct: 405 FSGYPSITLPFAQ-KDGMPLGINLTCRPFEEQMMFDLAQGMEDITG 449 >gi|189485135|ref|YP_001956076.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254790411|sp|B1GZD3|GATA_UNCTG RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|170287094|dbj|BAG13615.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 485 Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 173/490 (35%), Positives = 278/490 (56%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E+ V + +++RS I ++E+V + + I+ ++ ++ A++++ +++ A +SD Sbjct: 1 MDEILKTRVKDLCEKIRSGQIKSIEIVKACFKRIKETDPKVKAFLKLNEERSLKQAAQSD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +I G + LEG+PIGIKD KG + S L+ + Y++ V +KL + G + + Sbjct: 61 DKIKTGAECGSLEGVPIGIKDNIMIKGESMTSASKYLENYISPYDAAVIEKLKEAGVIFV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ NMDEFAMG S ETS Y +PW ++D + PGGSSGGS+AAV+ + ++G+D Sbjct: 121 GRTNMDEFAMGGSTETSVYQKTANPW-NID----YIPGGSSGGSAAAVSSGMVPFALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPA F G VG KP+YG SR G + A S DQ G+ ++TV+D+++L IA D Sbjct: 176 TGGSIRQPAGFCGIVGYKPSYGLISRYGACALASSFDQIGVFSKTVKDASLLTSFIAVGD 235 Query: 240 ECDATCVNLPVPDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D C +Y + ++ + +GIPK+ I K + ++ LK GA Sbjct: 236 YRDPVCETGEQTNYAHGIYNPDILKTVRIGIPKQLSNYKADEEITKYFGDAVNKLKLEGA 295 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 VEI +P +Y Y +I AE S+N+A +DG+RYG R G+++ + Y +R+ G Sbjct: 296 ATVEIDVPAYKYVPALYEVIMCAEVSANIATFDGIRYGYRSSNGRNLNDEYAKSRAESLG 355 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 EVK RI+ GTYVL ++ Y Y +A+++RTL+ T+A+++ D I +P T Sbjct: 356 YEVKKRILFGTYVLGAKNYYRCYHQAQRVRTLLINQITDAYKK-CDFIFSPATLQMPVKF 414 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G++ + D+F A N+AGLP I+VP MP+G+ +G F + LF + Sbjct: 415 GEKLSEEC-------DIFLTAANLAGLPGITVPCTFTSSGMPMGVHFMGSRFSDAKLFQI 467 Query: 477 GQIIEKEAGY 486 E+ +G+ Sbjct: 468 ADAFERISGF 477 >gi|292655213|ref|YP_003535110.1| aspartyl-tRNA(Asn) amidotransferase subunit A [Haloferax volcanii DS2] gi|291372021|gb|ADE04248.1| aspartyl-tRNA(Asn) amidotransferase subunit A [Haloferax volcanii DS2] Length = 423 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 185/429 (43%), Positives = 261/429 (60%), Gaps = 21/429 (4%) Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K ++G D L G + +KD +T+G+ T S +L+ + P Y++TV + L D GA ++ Sbjct: 9 KETLDGSDDGPLAGKSVAVKDNISTEGLRTTCGSAMLEDYVPPYDATVVELLKDAGATIV 68 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEF MG++ ETS +GP +P + PGGSSGGS+AAVA ++GTD Sbjct: 69 GKANMDEFGMGTTTETSAFGPTKNP-----VDESRVPGGSSGGSAAAVAAGEADLALGTD 123 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA+F G VGIKPTYG SR G++++A SL+Q G I TV +A LL IAG D Sbjct: 124 TGGSIRCPAAFCGVVGIKPTYGLVSRYGLVAYANSLEQIGPIAPTVEGAAALLDVIAGPD 183 Query: 240 ECDATCVNLPV-PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D T + +Y A D ++G+T+G+P E+ ++ +++ + + L+ GA+ Sbjct: 184 DRDGTTRDAGTDSNYAAAADGDVEGLTIGVPTEF-VEGADEGVEEAFWAALDELEAQGAE 242 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYENTRSIGFG 356 E+S+P + A+ AYY+I+ +EASSNLAR+DGVRYG + G D E + R GFG Sbjct: 243 YREVSMPSVEKAVAAYYVIAMSEASSNLARFDGVRYG-KSGGYDGNWNEAFARAREDGFG 301 Query: 357 QEVKHRIMIGTYVLSSRCYDSHY---LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 EVK RI++GTY LS+ +D +Y A R +K+DF EAFE VDV+ +PT P Sbjct: 302 SEVKRRILLGTYALSAGYHDKYYAKAQDA---RAWVKQDFDEAFED-VDVVASPTMPVPP 357 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F LG+ ++ M D TV VN+A LPAISVPA + +P+GLQLIG F EET+ Sbjct: 358 FELGESLDDPLQM--YLADANTVPVNLANLPAISVPAGETD-GLPVGLQLIGPKFGEETI 414 Query: 474 FSVGQIIEK 482 +E Sbjct: 415 VRAASAVEN 423 >gi|269928436|ref|YP_003320757.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269787793|gb|ACZ39935.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 472 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 181/492 (36%), Positives = 271/492 (55%), Gaps = 40/492 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F+ V+E LRS+ +S VEL ++ IE ++NAYI V+A +A A A+ +++ Sbjct: 6 DLPFLPVTELAPLLRSRQVSPVELTHQVLERIEAVEPKVNAYITVLADEAMAQAKAAERN 65 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ GIP+G+KD T+G+ T A S +L+ F P ++T +L GA+ GK Sbjct: 66 IAMGNYLGPFHGIPVGLKDLLMTRGVRTTAGSAVLEDFVPDEDATTVTRLRQAGAIFTGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN+ EFA G + +GP +PW PGGSSGGS+AAVA C A++G+DTG Sbjct: 126 LNLHEFAFGVTTNNWTFGPTHNPWMP-----GHIPGGSSGGSAAAVAAGECIAALGSDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VG+ PTYGR SR G ++ + SLD G +TRTV D+A++L IAGYD Sbjct: 181 GSIRIPAALCGNVGLMPTYGRVSRYGALALSWSLDHVGPMTRTVTDAALMLNVIAGYDPM 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D +PVPDY ++ + G+ VG+P+ Y + + P + + +Q I+ L + GA IVE Sbjct: 241 DTATQPVPVPDYTDGIEGGLTGLRVGVPRNYFFERIHPEVKQGVEQAIARLGELGADIVE 300 Query: 302 ISLPHTQYALPAYYIISPAEASS---NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + LP +++L A + I AEA+S +L R +Y DI + E +I Sbjct: 301 VDLPWVEHSLLAEFAIVMAEATSYHEHLLRTRADKY-----APDIRVLLEAGEAIS---- 351 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 YL+A+++RT+IK+ F A EQ DVI TPT P P+G+ Sbjct: 352 -----------------GPMYLKAQRLRTMIKQSFRAAMEQ-CDVIATPTLPHPPVPIGQ 393 Query: 419 EENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLG-LQLIGQPFREETLF 474 + + D +T V+++G PAI++P A ++ P+ LQLIG+PF E T+ Sbjct: 394 DTVTIDGVEETTLDCMVRYTCPVDLSGQPAIALPCAFNDQNQPVASLQLIGRPFDEATIC 453 Query: 475 SVGQIIEKEAGY 486 + E + Sbjct: 454 RAARAYEATTDF 465 >gi|269792725|ref|YP_003317629.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100360|gb|ACZ19347.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 485 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 183/471 (38%), Positives = 271/471 (57%), Gaps = 11/471 (2%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPI 76 S D+ AV++++S ++ +++ + A ++V +A AE D+ G L G+P+ Sbjct: 17 SGDLRAVDVLESCLERLDSLEGYIRACLDVYVDEALEEAERVDRLSQEGHHPGPLAGVPV 76 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD KG T S +L+G+ Y++TV L GAV++GK NMDEFAMGSS E S Sbjct: 77 LLKDNICVKGRRTTCGSRMLEGWISPYDATVVNLLRQAGAVVVGKTNMDEFAMGSSTENS 136 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 + P +P PGGSSGGS+AAVA ++G+DTGGSIRQPA+F G G+ Sbjct: 137 AFFPTSNP-----HDLARVPGGSSGGSAAAVAAGYVPLALGSDTGGSIRQPAAFCGIHGL 191 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYG SR G+++FA SLDQ G + R + D A+ + I D DAT + P + Sbjct: 192 KPTYGMVSRYGLVAFASSLDQIGPMARDMGDLALCMDVIGQRDPMDATSRSFEGPRFIDV 251 Query: 257 L-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA-LPAY 314 + + S++G+ VGI + + + + + DAGA + ++ LP + A L +Y Sbjct: 252 IRNDSLKGLRVGILRGFDEGRVDQELTMVSLMASRFCLDAGAAVSDVKLPVSMGAGLASY 311 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 YII+PAEASSNLAR+DGVR+G V G + E Y+ RS GFG EVK RIM+GTY LSS Sbjct: 312 YIIAPAEASSNLARFDGVRFGPSVTGDTLGETYQMVRSQGFGPEVKRRIMMGTYALSSGY 371 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD +Y RA+++R I+ +F + F + VD+++ P P+ P K E + D F Sbjct: 372 YDEYYGRAQRVREAIREEFRQVF-RSVDLLICP--PSPCLPFLKGEMAEDPVRMYLTDAF 428 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 T+ N+AG+PA++V A +PL +QL+ + L G ++E+ G Sbjct: 429 TLPANLAGVPALTVYAGRSRTGLPLAVQLMAPWGEDRRLVMAGAVLERAFG 479 >gi|218281360|ref|ZP_03487838.1| hypothetical protein EUBIFOR_00403 [Eubacterium biforme DSM 3989] gi|218217452|gb|EEC90990.1| hypothetical protein EUBIFOR_00403 [Eubacterium biforme DSM 3989] Length = 457 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 165/457 (36%), Positives = 257/457 (56%), Gaps = 22/457 (4%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 I+ I ++NA + ++ + A N +A L G+P+ +KD +T GI T Sbjct: 13 IEKINAVQPKLNAVVTMIDEDA------------NTNAGKLAGVPVALKDNISTCGIKTT 60 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDS 150 A S ILD + P Y++T+ +KL + GA + K +MDE MG +N+ +Y G V +P+ Sbjct: 61 ASSRILDNYVPVYDATIVKKLREAGADFICKASMDELGMGGTNKNAYTGAVHNPY----D 116 Query: 151 TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 D+ PGGSSGG +A VA +IGTDTG S+R+PA++ G VG+KPTYGR SR GII Sbjct: 117 LDRI-PGGSSGGCAALVAAGCVPLAIGTDTGDSVRKPAAYCGVVGVKPTYGRISRYGIIP 175 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 +A SLD G T V+D+A+ L+ +AG D+ D T V +Y + L+ + T+G+ K Sbjct: 176 YASSLDHVGYFTTNVKDAALALEVLAGRDDHDMTSSYKEVGEYSKLLNSDLTNKTIGVFK 235 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL--PAYYIISPAEASSNLAR 328 + + + + +S L++ GAKIV + +P L P Y I+ AEA++N + Sbjct: 236 TVLDEVENEELKAQFNALVSKLEEKGAKIVNVEMPKEYMELIAPVYKTIANAEATANHSN 295 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 DG+R+G+R EG+D+ E+ NTR+ GF V+ R +IG+Y L D + +A+KIR L Sbjct: 296 LDGIRFGMREEGQDLEEVMTNTRTKGFSSYVRARFVIGSYSLFEENQDRLFRKAQKIRRL 355 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 I + + + FE+ D +L+ PT A PL E +N + + N +G P+I++ Sbjct: 356 IVQAYAKMFEE-CDAVLSVAAPTIA-PLIHESSNVRFGVSSFAEEHMQLQNFSGYPSITL 413 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 P + MP+ + L +PF E+ +F V IE+ G Sbjct: 414 PLGKVD-SMPVAVNLTCKPFEEQKMFDVSSAIEECTG 449 >gi|312219812|emb|CBX99754.1| similar to glutamyl-tRNA(Gln) amidotransferase [Leptosphaeria maculans] Length = 514 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 176/440 (40%), Positives = 260/440 (59%), Gaps = 47/440 (10%) Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 D+ PI IKD TK + T A S +L+ F Y++TV L + GAV++GK NMDEF M Sbjct: 44 DILNKPIAIKDNICTKDMKTTASSALLNNFTTPYDATVVTLLQEAGAVVMGKTNMDEFGM 103 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS + S++GPV ++ + GGSSGGS+ AVA C A++GTDTGGS+R PA+ Sbjct: 104 GSHSMNSHFGPVK---MQRYQGEEVSAGGSSGGSALAVASGQCWAALGTDTGGSVRLPAA 160 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 +TG VG KP+YGR SR G+I++A SLD G+ RT + A + A+ YD D T +LP Sbjct: 161 YTGVVGFKPSYGRLSRWGVIAYANSLDTVGVFGRTAKHVAAVYNALDVYDPRDPTS-HLP 219 Query: 250 -----VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + +Y R+ + +GIP +Y + L PT+ + W + + L+ AG + + L Sbjct: 220 STRSRLGNYNRS-----PSLRIGIPLDYNIATLHPTVRQAWIRTMKVLRKAGHSLHPVRL 274 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE---MYENTRSIGFGQEVKH 361 P TQ+AL AYY+++PAEASSNLA+YDGVR+G R +G D ++ TR GFG EV+ Sbjct: 275 PSTQHALSAYYVLAPAEASSNLAKYDGVRFGSRTQGVDGTPQSVLFAKTRGQGFGPEVQR 334 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-------EQ---------GVDVIL 405 RI++G + LS++ D+++++A+K+R L+++DF + F EQ VD ++ Sbjct: 335 RILLGAFSLSAQAIDNYFIQAQKVRRLVQQDFDKVFATTNPLLEQVAPSEGGAIKVDALV 394 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP------- 458 PT P+ A P E + + NDVFTV ++AGLPAISVP + + + Sbjct: 395 CPTAPSLA-PSISEVKDQDPIQAYMNDVFTVPASLAGLPAISVPIPVESEAVKGEESEAE 453 Query: 459 -----LGLQLIGQPFREETL 473 G+Q+IGQ F ++ L Sbjct: 454 SIVRSAGIQIIGQ-FGDDAL 472 >gi|322371115|ref|ZP_08045667.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Haladaptatus paucihalophilus DX253] gi|320549105|gb|EFW90767.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Haladaptatus paucihalophilus DX253] Length = 422 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 181/426 (42%), Positives = 256/426 (60%), Gaps = 14/426 (3%) Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +++ I D L G + +KD +T+G+ T S +L+ + P Y++TV +L + GA + Sbjct: 8 TEETIDGADDGPLAGTTVAVKDNISTEGVRTTCGSAMLEEYVPPYDATVVTRLKEAGATI 67 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK NMDEF MG++ ETS +GP +P + PGGSSGGS+AAVA ++GT Sbjct: 68 VGKTNMDEFGMGTTTETSAFGPTENP-----VAEGRVPGGSSGGSAAAVAAGEATLALGT 122 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIR PA+F G VGIKPTYG SR G++++A SL+Q G I TV ++A LL IAG Sbjct: 123 DTGGSIRCPAAFCGVVGIKPTYGLVSRYGLVAYANSLEQIGPIAPTVEEAATLLDVIAGP 182 Query: 239 DECDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ DAT + + G+ +G+P E +++ W + L+ GA Sbjct: 183 DDHDATTREEGADADYASAADGEVDGLDIGVPTELVEGADEGVVERFW-DAMDDLEAKGA 241 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYENTRSIGF 355 + E+SLP ++A+ AYY+I+ +EASSNLARYDGVRYG G D E + TR F Sbjct: 242 TVHEVSLPSVEHAVEAYYVIAMSEASSNLARYDGVRYG-NSGGFDGNWNETFSETREEAF 300 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EVK RI++GTY LS+ +D +Y +A+ R +K+DF AFE VDV+ +PT PT F Sbjct: 301 GDEVKRRILLGTYALSAGYHDKYYKKAQDARAWLKQDFDSAFED-VDVLASPTMPTPPFE 359 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG+ ++ M D TV VN+A LPAISVPA + +P+G+Q IG F E+ + Sbjct: 360 LGESLDDPLQM--YLADANTVPVNLANLPAISVPAGETD-GLPVGVQFIGPKFGEKRVIR 416 Query: 476 VGQIIE 481 VG +E Sbjct: 417 VGSALE 422 >gi|291276970|ref|YP_003516742.1| Glu-tRNAGln amidotransferase subunit A [Helicobacter mustelae 12198] gi|290964164|emb|CBG40009.1| Glu-tRNAGln amidotransferase subunit A [Helicobacter mustelae 12198] Length = 450 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 180/409 (44%), Positives = 255/409 (62%), Gaps = 18/409 (4%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIPI IKD KG S IL + Y ++V ++L G+ NMDEFAMGS+ Sbjct: 45 GIPILIKDNINVKGWEITCASKILKNYIAPYHASVIERLHAQNFCAFGRANMDEFAMGST 104 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+S YG +P D T PGGSSGGS+AAVAG + A++G+DTGGSIRQPA++ G Sbjct: 105 TESSSYGITKNPR---DITR--VPGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPAAYCG 159 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-- 250 VG+KPTYG SR G+I+++ SLDQ G IT+ V D AIL AI G+D D+T + P Sbjct: 160 CVGLKPTYGSVSRYGLIAYSSSLDQIGPITQNVEDCAILFDAIKGHDPKDST--SHPAEQ 217 Query: 251 -PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P + R LD + M + I ++ ++ S I + + I+ L+ G I+E ++ T Y Sbjct: 218 KPCFPR-LDPK-RKMRIAILRDL-VEKASNPIKRAYDDTIAMLQKMGHTIIEKTMLQTDY 274 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTY 368 + YYII AEASSNLAR+DGVRYG R ++ ++Y TR+ GFG EVK+RI++G++ Sbjct: 275 HISTYYIICTAEASSNLARFDGVRYGNRASNPLNLKDLYIQTRTQGFGDEVKNRILLGSF 334 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 VLSS YD++YL+A+K+R LIKR + E + DVI P TP A G +N + Sbjct: 335 VLSSGYYDAYYLKAQKVRELIKRQYNEIL-RDCDVIFLPITPFVAPKFGSSKN---PLEM 390 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +D++T+ VN+AGLPA+S+P A + +P+G+Q I + F E++LF + Sbjct: 391 YLSDIYTIGVNLAGLPALSLPIAKDAENLPIGMQFIAKAFDEQSLFDIA 439 >gi|167736587|ref|ZP_02409361.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 14] Length = 339 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 213/330 (64%), Gaps = 17/330 (5%) Query: 167 VAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 VA L A+ GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ Sbjct: 1 VAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAA 60 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDY 276 D A+LL A+AG+DE D+T + DY R L ++ + G+ +G+P EY Sbjct: 61 DCALLLNAMAGFDERDSTSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAG 120 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 L+ + + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG Sbjct: 121 LADDVRAAIDAALKTYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGH 180 Query: 337 R-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 R E +D+L+MY+ +R+ GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF E Sbjct: 181 RAAEYRDLLDMYKKSRAEGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQE 240 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL--- 452 AF+ DVI+ P +PT A+ +G + ++ M D++T++V++AGLP +SVP Sbjct: 241 AFKS-CDVIMGPASPTVAWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAG 297 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 K P+GLQ+IG F E + V ++ Sbjct: 298 ANAKRPVGLQIIGNYFDEARMLQVADAFQR 327 >gi|320527939|ref|ZP_08029105.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Solobacterium moorei F0204] gi|320131565|gb|EFW24129.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Solobacterium moorei F0204] Length = 471 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 163/419 (38%), Positives = 240/419 (57%), Gaps = 12/419 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI IKD +TKGI T + S IL + P Y++T+T+KL + GAV + K +MDE AMG Sbjct: 52 LHGVPIAIKDNVSTKGIRTTSGSRILSNYFPIYDATITKKLREAGAVCIAKASMDELAMG 111 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +N T + G +PW + T GGSSGGS+A VA + +IG+DTG S+R+PAS+ Sbjct: 112 GTNLTCFTGAAHNPWDTRRMT-----GGSSGGSAALVAAGVVPMAIGSDTGDSVRKPASY 166 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G +G+KPTYGR SR GII +A SLD G TR+V D+ I L+ +AG D+ D T N PV Sbjct: 167 CGVIGVKPTYGRISRYGIIPYASSLDHVGYFTRSVEDACITLEVLAGRDDLDVTSSNRPV 226 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--TQ 308 Y AL+ SIQG + I +P I K + + + LK AGA + + Sbjct: 227 EHYTEALNDSIQGKKIAILGNVIDSVSNPEIVKMFNELVEKLKVAGAVVDTYHFDDKLMR 286 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 LP YY I+ EA+SN + DG+R+G+R +G D+ E+ N+R+ GFG ++ R +IG+Y Sbjct: 287 AILPTYYTIANCEATSNHSNLDGIRFGVREDGADMQEIMTNSRTKGFGPLIRRRFVIGSY 346 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--SM 426 L + + +A+K+R LI E F++ D I P + T A P NN S Sbjct: 347 GLFEANQERIFRKAQKVRRLIVNAMKECFKE-YDCIFAPASGTIA-PFIDAINNDDKLST 404 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ + + N +G P+++VP E+ P+G+ L + E T+F++ + IE G Sbjct: 405 DYLVAENYMAMANFSGDPSMTVPMGF-EEGCPIGVNLTCPAWHESTMFTIAKAIEDITG 462 >gi|329765178|ref|ZP_08256759.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138337|gb|EGG42592.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Candidatus Nitrosoarchaeum limnia SFB1] Length = 457 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 174/455 (38%), Positives = 266/455 (58%), Gaps = 14/455 (3%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHT 89 ++ I+ + ++A++ + +KA A DK+I +G+ G+PI IKD K T Sbjct: 5 MEHIQKIDGNLHAFLSL-NEKAIDQARVIDKKIKSGEKIGQCFGMPISIKDNICIKDSKT 63 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S +L+ F Y++TV KL A+ +GK+N+DEFAMG + E S YGP +PW + Sbjct: 64 TCASKMLENFIAPYDATVITKLKQQDAIFVGKVNLDEFAMGLTTEFSAYGPSKNPWNT-- 121 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + PGGSSGGS+ +V+ F C AS+G+DTGGS+R PASF TVG KPTYG SR G+I Sbjct: 122 ---DYVPGGSSGGSAVSVSAFECVASLGSDTGGSVRNPASFCSTVGFKPTYGLISRYGLI 178 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 S+A S++Q G +TRTV D+A +L I+G D D T V+ DY + +D I+G +GI Sbjct: 179 SYANSIEQIGPLTRTVEDTAFMLNLISGIDPNDNTTVDNHNEDYLKDIDSGIEGKKIGII 238 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 KE + + + + IS L + GA E+SL +Y++ AYY I+ EA SNLARY Sbjct: 239 KEMIGEGIDSNVLSATKNAISKLDNMGAICEEVSLDMVKYSVAAYYTITATEAGSNLARY 298 Query: 330 DGVRYG--LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 D +RYG VEG + E R G EV R+++G +V S+ ++L+A K++ Sbjct: 299 DNLRYGYDFSVEGYEFNSYIEKARK-KLGPEVTRRMILGGFVPSAGHAGKYFLKALKVKN 357 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 + R EAF++ D+++ PT P F +G++ ++ ++ I D+ TV N+ G PAIS Sbjct: 358 KLTRQINEAFKK-FDLLIAPTVPVLPFKIGEKIDDPVALFLI--DINTVTANLTGKPAIS 414 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +P + +P+G+QLIG ++ + + +EK Sbjct: 415 IPYDI-SNGLPIGIQLIGNSMDDKLVLQAARALEK 448 >gi|320033120|gb|EFW15069.1| glutamyl-tRNA amidotransferase [Coccidioides posadasii str. Silveira] Length = 499 Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 179/468 (38%), Positives = 265/468 (56%), Gaps = 53/468 (11%) Query: 61 KRIINGDARDLEGIP--------IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 +R+ + DAR G P I IKD T+ + T S IL+ F + +TV + L Sbjct: 35 ERVKDADARRKRGAPKSSLDGKLIAIKDNICTRDVRTTCASAILENFTSPFNATVVELLE 94 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 ++GA++ GK N+DEF MGS + S++GPV D + GGSSGGS+ AVA C Sbjct: 95 ESGAIVAGKTNLDEFGMGSHSTYSHFGPV--KGVRADDLGHVSAGGSSGGSAIAVATEQC 152 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A++GTDTGGS+R PA++TGTVG KP+YG SR G++++A SLD GII + + Sbjct: 153 YAALGTDTGGSVRLPAAYTGTVGFKPSYGLLSRWGVVAYANSLDTVGIIGANTSTVSEVF 212 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMT---------VGIPKEYRLDYLSPTIDK 283 + YD D T ++ R+ I G T +G+P EY + L P + + Sbjct: 213 GVLNRYDHRDPTSIS----KATRSRIDEITGSTSKTRSERLRIGVPIEYNILELDPFVRE 268 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKD 342 TW++ I LK+ G + +SLP T+ AL AYY+++PAEASSNLA+YDGVRYG R ++ D Sbjct: 269 TWRKSIQHLKNQGHTVHPVSLPATKQALSAYYVLAPAEASSNLAKYDGVRYGTRDLDSPD 328 Query: 343 IL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-- 398 +Y +R GFG EVK RI++G + LS+ D+++++A+K+R L++ DF + F Sbjct: 329 NTGGYLYARSRGSGFGPEVKRRIVLGAFSLSAEAIDNYFIQAQKVRRLVQSDFNKVFRLH 388 Query: 399 ----------------------QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 + VDV++ PT P+ L EN + + + NDVFTV Sbjct: 389 NPLLQATLTSHPKALESDGDTAEKVDVLVCPTAPSPPPLLCSLENAAPTEAYT-NDVFTV 447 Query: 437 AVNMAGLPAISVPAALC--EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++AGLPA+SVP E++ PLG+Q+IGQ ++ + VG +EK Sbjct: 448 PASLAGLPALSVPVTPGDREQESPLGIQVIGQFGDDQLVLDVGSRLEK 495 >gi|46124065|ref|XP_386586.1| hypothetical protein FG06410.1 [Gibberella zeae PH-1] Length = 479 Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 177/479 (36%), Positives = 258/479 (53%), Gaps = 67/479 (13%) Query: 53 RAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 + AA + + + +D++ + +KD AT TQ SHIL +E+TV ++L Sbjct: 14 KLAAADPNADFLPFMCKDVKPFALAVKDNIATSEFPTQCASHILSAHPSPFEATVVRQLR 73 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS----SAAVA 168 GA ++GK NMDEF MGS + S +G V +P D+ G S + A VA Sbjct: 74 KRGATVVGKTNMDEFGMGSHSINSVHGAVRNPLAKNDNVSAGGSSGGSAVAVRLGDADVA 133 Query: 169 GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDS 228 +GTDTGGSIR PA++TGTVG KP+YG SR G++ +A SLD G + + V+ Sbjct: 134 -------LGTDTGGSIRLPAAYTGTVGYKPSYGMISRFGVVPYANSLDTVGFMAKDVKPI 186 Query: 229 AILLKAIAGYDECD---------------ATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 L+ ++E D A + +PD + + +G+P EY Sbjct: 187 HDLVFKTKMHEEHDSEDPTSLSSASRRRCAETIPSALPDLSK--------LNIGVPLEYN 238 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 +D L P+I W S L+ GA +V ISLP T+ AL AYY+++PAEASSNLA+YDGVR Sbjct: 239 IDELDPSIRAAWISAASSLEAQGATLVPISLPSTKEALCAYYVLAPAEASSNLAKYDGVR 298 Query: 334 YGLRVEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 YG R EG D + +Y +TR GFG+EV+ RI++GTY LSS D+++++A+K+R ++++ Sbjct: 299 YGERGEGSDAVGETLYSDTRGEGFGEEVRRRILLGTYSLSSEAIDNYFIQAQKVRRMVQQ 358 Query: 392 DFTEAF---------EQ-------------------GVDVILTPTTPTSAFPLGKEENNS 423 DF F EQ VD IL PT PT FP EE Sbjct: 359 DFDRVFRLDNPLYEPEQFDLSDMAEATGMEDKTGPVQVDFILCPTAPT--FPPRLEEIEE 416 Query: 424 GSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S Y NDVFTV ++AGLPA+S+P + + P GLQ+IGQ + ++ + + + ++ Sbjct: 417 QSSVDTYMNDVFTVPASLAGLPAVSIPVKVEGSQFPAGLQVIGQYWDDQRVLQLAEKLK 475 >gi|317150044|ref|XP_003190384.1| glutamyl-tRNA amidotransferase, A subunit [Aspergillus oryzae RIB40] Length = 505 Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 178/499 (35%), Positives = 273/499 (54%), Gaps = 54/499 (10%) Query: 33 AIENSNSQMNAYIEVVAQKA--RAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 A + S++ +NA I + R +++D R G R ++G I IKD T+ + T Sbjct: 12 ANQKSHAALNALITALQPSGQWREQVKDADLRTERGIPRSKVDGRLIAIKDNICTRDLPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S L+ F + STV +L D GAV+ GK N+DEF MGS + S +GPV S W+ D Sbjct: 72 TCASGTLEKFVSPFNSTVVGQLQDAGAVVAGKTNLDEFGMGSHSVYSRFGPVRSFWQGRD 131 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + G S G + A G C A++GTDTGGS+R PA++TGTVG KP+YG SR G++ Sbjct: 132 AEPLSAGGSSGGSAVAVATG-QCYAALGTDTGGSVRLPAAYTGTVGFKPSYGLISRWGVV 190 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG------ 263 ++A SLD GI+ R+ + + +D D T NL R L ++Q Sbjct: 191 AYANSLDTVGILGRSTASVRDVFNVVNQHDPRDPT--NLSPSSRSRIL-STLQSPFCASR 247 Query: 264 -----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + +G+P EY + L P + W + +++L+ G I +SLP T+ AL AYY+++ Sbjct: 248 LTSAPLRIGVPTEYNILELHPAVRHAWSRTLAYLQRQGHSIHAVSLPTTKLALSAYYVLA 307 Query: 319 PAEASSNLARYDGVRYGLRV-----EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 PAEASSNLA+YDGVRYG R +G+ +Y +TR GFG EVK RI++G + LS+ Sbjct: 308 PAEASSNLAKYDGVRYGTRCGVLDRDGRPQGNLYASTRGHGFGSEVKRRIVLGAFSLSAH 367 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQ------------------GVDVILTPTTPTSAFP 415 D+++++A+++R L++RDF F+ GVD+++ PT P+ P Sbjct: 368 AMDNYFIQAQRVRRLVQRDFDYIFQMKQPLASPGTDSERVPEHTGVDILICPTAPSP--P 425 Query: 416 LG-----KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP------LGLQLI 464 G + + + NDVFTV ++AGLPAISVP + +K G+Q++ Sbjct: 426 PGISDLIDSDAGASPLDAYMNDVFTVPASLAGLPAISVPVTVSGEKQDSSEAGLAGIQIV 485 Query: 465 GQPFREETLFSVGQIIEKE 483 GQ ++ + VG+++E + Sbjct: 486 GQYGDDQLVLKVGELVEDQ 504 >gi|225552009|ref|ZP_03772949.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia sp. SV1] gi|225371007|gb|EEH00437.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Borrelia sp. SV1] Length = 482 Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 176/490 (35%), Positives = 279/490 (56%), Gaps = 17/490 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L+ + +++ ++ + ++ +++ +Y E N +N YIE + A+ D Sbjct: 1 MLDLSNLTLTKIQELVLTRKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYD 58 Query: 61 KRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + N + DL G+ I +KD + K S IL G+ Y++TV ++L + GA++ Sbjct: 59 DCLKNCELEDLPLIGMLIAVKDNISIKDKSLTCASEILKGYISPYDATVIKRLKNKGAIL 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G+ NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+ Sbjct: 119 IGRTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G Sbjct: 174 DTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGS 233 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D+ D+T V++ D+ +S+Q + + KE D + + ++ + L G Sbjct: 234 DKMDSTSVDI-FDDFYPLKIESLQSKNLAVIKELGEDLMDKNVANSFAKFKLDLLSKGIN 292 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 I E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS F + Sbjct: 293 IKEVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRISESLSLNDFYFKHRSNFFSE 352 Query: 358 EVKHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 EVK RI++G Y+L S YDS +Y +A +I + LI F + FE D I+TPT+ F Sbjct: 353 EVKRRIVLGNYLL-SEGYDSKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFR 410 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG + ++ M Y+D+ TV N+ G PAIS+P + E+ + +G+Q+IG+ ++ L S Sbjct: 411 LGLDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDEEGLSIGMQIIGRSKKDFELLS 468 Query: 476 VGQIIEKEAG 485 + + +E G Sbjct: 469 FSKNVIRELG 478 >gi|167813687|ref|ZP_02445367.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 91] Length = 337 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 148/326 (45%), Positives = 211/326 (64%), Gaps = 17/326 (5%) Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 L A+ GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+ Sbjct: 3 LAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCAL 62 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPT 280 LL A+AG+DE D+T + DY R L ++ + G+ +G+P EY L+ Sbjct: 63 LLNAMAGFDERDSTSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADD 122 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VE 339 + + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E Sbjct: 123 VRAAIDAALKTYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAE 182 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +D+L+MY+ +R+ GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ Sbjct: 183 YRDLLDMYKKSRAEGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS 242 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKK 456 DVI+ P +PT A+ +G + ++ M D++T++V++AGLP +SVP K Sbjct: 243 -CDVIMGPASPTVAWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAK 299 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEK 482 P+GLQ+IG F E + V ++ Sbjct: 300 RPVGLQIIGNYFDEARMLQVADAFQR 325 >gi|110667644|ref|YP_657455.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Haloquadratum walsbyi DSM 16790] gi|109625391|emb|CAJ51815.1| aspartyl-tRNA(Asn) amidotransferase subunit A [Haloquadratum walsbyi DSM 16790] Length = 469 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 183/454 (40%), Positives = 258/454 (56%), Gaps = 53/454 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+ + IKD +T G+ T S +L + P Y++TV ++L GA ++GK NMDEF MG Sbjct: 26 LDGVTVAIKDNISTAGVRTTCGSAMLSDYVPPYDATVVERLKQAGATIVGKTNMDEFGMG 85 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + ETS YGP +P + PGGSSGGS+AAVA ++G+DTGGS+R PA+F Sbjct: 86 GTTETSAYGPTKNPVDT-----DHVPGGSSGGSAAAVASGAADVALGSDTGGSVRNPAAF 140 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC----- 245 G VGIKPTYG SR G+I++A SL+Q G I TV+++A LL I+G D DAT Sbjct: 141 CGVVGIKPTYGLVSRYGLIAYANSLEQIGPIASTVQEAAELLDVISGPDPHDATTRFDNG 200 Query: 246 ------VNLPVPD---------------YERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 +N P D Y A D+ + GMTVG+ + LD + +T Sbjct: 201 ETSISDINPPDSDSDSDTITSHPATPKTYAAAADEDVSGMTVGVVTDL-LDGADDRVVET 259 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG--------- 335 ++ I+ L+ G +IVE+SL ++A+ AYY+I+ +EASSNLAR+DGVRYG Sbjct: 260 FRAAIAELESQGIEIVEVSLDSLEHAVQAYYVIAMSEASSNLARFDGVRYGPAGGATENS 319 Query: 336 --------LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 V+ + + + R IGFG+EVK RI++GTY LS+ ++ +Y +A+ R Sbjct: 320 NETIPNVDANVDDGNWNDSFAAVRDIGFGEEVKRRILLGTYALSAGYHEKYYDKAQDARE 379 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 +K+DF AFE+ DV+ TPT P P E+ + D TV VN+A LPAIS Sbjct: 380 WVKQDFETAFEKA-DVLATPTMPV--LPPAIGESLEDPLKLYLMDANTVPVNLANLPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 VPA + +P+G Q IG F EE + V +E Sbjct: 437 VPAGEVD-GLPVGFQAIGPAFGEEIIIQVAAAVE 469 >gi|303320807|ref|XP_003070398.1| Amidase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240110094|gb|EER28253.1| Amidase family protein [Coccidioides posadasii C735 delta SOWgp] Length = 499 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 179/468 (38%), Positives = 265/468 (56%), Gaps = 53/468 (11%) Query: 61 KRIINGDARDLEGIP--------IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 +R+ + DAR G P I IKD T+ + T S IL+ F + +TV + L Sbjct: 35 ERVKDADARRKRGAPKSSLDGKLIAIKDNICTRDVRTTCASAILENFTSPFNATVVELLE 94 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 ++GA++ GK N+DEF MGS + S++GPV D + GGSSGGS+ AVA C Sbjct: 95 ESGAIVAGKTNLDEFGMGSHSTYSHFGPV--KGVRADDLGYVSAGGSSGGSAIAVATEQC 152 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A++GTDTGGS+R PA++TGTVG KP+YG SR G++++A SLD GII + + Sbjct: 153 YAALGTDTGGSVRLPAAYTGTVGFKPSYGLLSRWGVVAYANSLDTVGIIGANTSTVSEVF 212 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMT---------VGIPKEYRLDYLSPTIDK 283 + YD D T ++ R+ I G T +G+P EY + L P + + Sbjct: 213 GVLNRYDHRDPTSIS----KATRSRIDEITGSTSKTRSERLRIGVPIEYNILELDPFVRE 268 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKD 342 TW++ I LK+ G + +SLP T+ AL AYY+++PAEASSNLA+YDGVRYG R ++ D Sbjct: 269 TWRKSIQHLKNQGHTVHPVSLPATKQALSAYYVLAPAEASSNLAKYDGVRYGTRDLDSPD 328 Query: 343 IL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-- 398 +Y +R GFG EVK RI++G + LS+ D+++++A+K+R L++ DF + F Sbjct: 329 NTGGYLYARSRGSGFGPEVKRRIVLGAFSLSAEAIDNYFIQAQKVRRLVQSDFNKVFRLH 388 Query: 399 ----------------------QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 + VDV++ PT P+ L EN + + + NDVFTV Sbjct: 389 NPLLQATLTSHPKALESDGDTAEKVDVLVCPTAPSPPPLLCSLENAAPTEAYT-NDVFTV 447 Query: 437 AVNMAGLPAISVPAALC--EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++AGLPA+SVP E++ PLG+Q+IGQ ++ + VG +EK Sbjct: 448 PASLAGLPALSVPVTPGDREQESPLGIQVIGQFGDDQLVLDVGSRLEK 495 >gi|261419598|ref|YP_003253280.1| amidase [Geobacillus sp. Y412MC61] gi|319766416|ref|YP_004131917.1| amidase [Geobacillus sp. Y412MC52] gi|261376055|gb|ACX78798.1| Amidase [Geobacillus sp. Y412MC61] gi|317111282|gb|ADU93774.1| Amidase [Geobacillus sp. Y412MC52] Length = 470 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 184/486 (37%), Positives = 270/486 (55%), Gaps = 43/486 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN +SE L++K++S VELVD ++ IE N ++NAYIEV A+KAR AE ++ I Sbjct: 5 LNTKTISELSPLLKNKEVSPVELVDDVLEQIETLNDKLNAYIEVTAEKARKQAEAAESEI 64 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++G+ R L GIPI IKD T S I FRP Y +TV +KL + GAV GK Sbjct: 65 LSGNYRGPLHGIPIAIKDILYVANETTTMGSKIHRDFRPTYSATVIEKLTEAGAVFPGKT 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E+A G++N ++GP +PW + PGGSSGGS A A + AS+GTDTGG Sbjct: 125 NLHEYAWGATNNNPHFGPARNPWDP-----ERIPGGSSGGSGVATAAHMTIASLGTDTGG 179 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+SF G VG+KPTYG S+ G A SLD G + +T RD+A +L+A+AGYD D Sbjct: 180 SIRIPSSFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKTARDAAYILEAVAGYDPKD 239 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T + P Y +S++G+ +GI + Y D++ +++ +Q I+ L+ GA + + Sbjct: 240 PTSTDAPATSYSTQFMESVKGVKIGI-EPYFFDHVDKGVERVVKQAIASLEREGAVVETV 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +P QYA A I +EAS+ + ++E E+ FG +V+ Sbjct: 299 RIPTLQYAQYAEMITILSEASA-------------IHHNHLIEREED-----FGDDVRFL 340 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---- 418 + +G L S YL A++IR + R+F E F + VDV++TPT P +G+ Sbjct: 341 LKLGE--LPSAV---DYLEAQQIRLKLDREFMEVFNK-VDVLITPTIPFLPPKIGQDTVW 394 Query: 419 ---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 EE N + HI FT N+ GLP ++VP + +P+G+Q+IG F E T+ + Sbjct: 395 INGEEVN--FLDHIIR--FTGPFNLTGLPVVTVPCGFVQ-GLPVGMQIIGPAFGEGTILN 449 Query: 476 VGQIIE 481 V + E Sbjct: 450 VADVFE 455 >gi|325957808|ref|YP_004289274.1| glutamyl-tRNA(gln) amidotransferase subunit A [Methanobacterium sp. AL-21] gi|325329240|gb|ADZ08302.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Methanobacterium sp. AL-21] Length = 459 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 168/472 (35%), Positives = 256/472 (54%), Gaps = 26/472 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + + ++ +I+A++ ++ + + I + N NA++E+ A AE DK+I NG Sbjct: 1 MKLLDKSELIKDHEITALDNLEMFCRTIGHKNDDYNAFLEINEGSAHERAEAIDKKIENG 60 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ IGIK + H A S L+ + Y++TV +++ +++G NMD Sbjct: 61 EKVGKLAGLVIGIKSNINVEDFHITAASKTLENYLGSYDATVVKRIKQEDGIIIGMTNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETSY+G +P + PGGSSGGS+ AVA +C SIG+DTGGSIR Sbjct: 121 EFAAGSSTETSYFGHTENP-----AAPGRIPGGSSGGSAVAVAAEMCDLSIGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G VG KPTYG SR G++ A S DQ G +R V +A+L+ I GYDE + T Sbjct: 176 NPASHCGVVGFKPTYGVVSRQGLLDLAMSFDQIGPFSRDVSGAALLMDVIGGYDETECTS 235 Query: 246 VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 V P + L Q S++G ++G+ K++ D I ++ I +KD GA++ E+S Sbjct: 236 VKWDSPKFTDQLGQNSLEGTSLGVVKQF-FDVSDDKIVNIVEESIDKMKDMGAEVHELSF 294 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + LP YY+I+ E S +YDG +YG R+E G+EV RI Sbjct: 295 DYIDLCLPTYYLINYVEFFSATRKYDGRKYGERIEEV-------------CGEEVLRRIY 341 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G+Y+ +Y +A + R+LIKR+ + Q VDVI+ PT P +G + Sbjct: 342 MGSYISQKEFSGKYYKKALQARSLIKREVNKLL-QNVDVIVGPTVPMLPHKIG---TSLE 397 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 M DV TV N+AG+PA S+ A +P+G+Q+ G+PF + + + Sbjct: 398 PMDMYSYDVLTVIANLAGIPAGSMKAGEV-NGIPVGIQIQGKPFEDSKILGI 448 >gi|167717545|ref|ZP_02400781.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei DM98] Length = 332 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 147/323 (45%), Positives = 210/323 (65%), Gaps = 17/323 (5%) Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A+ GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + R+ D A+LL Sbjct: 1 AATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLN 60 Query: 234 AIAGYDECDATCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDK 283 A+AG+DE D+T + DY R L ++ + G+ +G+P EY L+ + Sbjct: 61 AMAGFDERDSTSLERADEDYTRHLGKAWAAGGDAGKPLAGLRIGLPAEYFGAGLADDVRA 120 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKD 342 + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D Sbjct: 121 AIDAALKTYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRD 180 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 +L+MY+ +R+ GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ D Sbjct: 181 LLDMYKKSRAEGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CD 239 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPL 459 VI+ P +PT A+ +G + ++ M D++T++V++AGLP +SVP K P+ Sbjct: 240 VIMGPASPTVAWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPV 297 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 GLQ+IG F E + V ++ Sbjct: 298 GLQIIGNYFDEARMLQVADAFQR 320 >gi|118431564|ref|NP_148119.2| glutamyl-tRNA(Gln) amidotransferase subunit A [Aeropyrum pernix K1] gi|150421555|sp|Q9YB80|GATA_AERPE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|116062889|dbj|BAA80718.2| glutamyl-tRNA(Gln) amidotransferase subunit A [Aeropyrum pernix K1] Length = 481 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 185/479 (38%), Positives = 275/479 (57%), Gaps = 13/479 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA-AAEESDKRIINGD 67 V + + R+ D VE V + A+ +NA+I + A++ AAEE+ +R G+ Sbjct: 7 VKQLLESYRAGDTDPVEHVSRVLDALRRWERDVNAFISLEAEEVLIDAAEEAARRWRRGE 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 AR LEG+ +G+KD +T + T A S +LDG+ P + +TV ++L GA+++GK N+DEF Sbjct: 67 ARRLEGVVVGVKDNISTSFLPTTAGSRMLDGYIPPFNATVVERLLMEGAIIIGKTNLDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGS+ E S +GP +PW PGGSS GS A +A C A++G+DTGGS+R P Sbjct: 127 AMGSTGEFSAFGPTRNPWDL-----SRVPGGSSSGSGACLAYGACDAALGSDTGGSVRLP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++T TVG+KPTYG SR G+I +A SL+Q + R+ D +LL+ IAG DE DAT + Sbjct: 182 AAYTATVGLKPTYGLVSRYGLIPYANSLEQISPMARSSEDVMLLLEVIAGGDEYDATSIY 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 R + +++ IP+E +++ + K + + L+ GA++ + L Sbjct: 242 SKPTTASREEGLKPEDLSLCIPEEL-VEHSEEAVRKAFYNTVGKLEGLGARLEYVGLGGA 300 Query: 308 Q-YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + YALPAYY I+ AEA+SNLARYDG Y +R D R IGFG EVK RI++G Sbjct: 301 EAYALPAYYTIALAEAASNLARYDGSLYPVRGSSGDYWRQAAEARGIGFGLEVKRRILMG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 YVLS D +YL A K+R +I+ + G ++ TP +P +G+ ++ + Sbjct: 361 VYVLSEGYKDEYYLAATKLRRVIRDAMLKTV--GKCLVATPASPIMPPRIGERVDDPLKL 418 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + DV+TV N++GLPAI++P + +P+GLQLIG E L IIE G Sbjct: 419 YAM--DVYTVLANLSGLPAIALPIEI-HGGLPVGLQLIGPRLGERLLAGAANIIEDLTG 474 >gi|311069374|ref|YP_003974297.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus atrophaeus 1942] gi|310869891|gb|ADP33366.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus atrophaeus 1942] Length = 468 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 175/490 (35%), Positives = 266/490 (54%), Gaps = 34/490 (6%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L+F A+ E ++++ +++S VE+ D ++ IE N ++NA++ A+ A A++++K Sbjct: 6 SQLSFAAIHEMAEKIQEREVSPVEIADLMLKRIERFNPKLNAFVSQTAELAAEQAKQAEK 65 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I+ G + L GIPI KD + TKGI T A S IL F P Y+STV KL D G V+LG Sbjct: 66 DIMQGRYKGPLHGIPIVHKDLYYTKGIRTTASSKILKDFVPDYDSTVAAKLADAGTVLLG 125 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+ EFA G + + Y+GP ++PW D + GGS +A +A G+DT Sbjct: 126 KVQTHEFAAGMTTNSEYFGPCLNPWNP-DVVPGGSSGGSGSAVAAGMAYL----GTGSDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G VG+KPTYGR SR GII A SLD AG +TR+V D+++ L ++G+D Sbjct: 181 GGSIRIPAACCGVVGMKPTYGRVSRYGIIPMAWSLDHAGPLTRSVLDASLCLDVMSGFDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D + V+LP P R ++G+ +G+P Y D L P ++ Q I+ ++ GA+IV Sbjct: 241 KDESTVDLPPPGI-RMYSDGLKGVKIGLPANYYYDNLDPEVETAMQATINKFREMGAEIV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SL ++A A I E S E + + +G +VK Sbjct: 300 EVSLQLMKHAQGATMAIMLGEMFS------------------AHEQWLDKHPEDYGTDVK 341 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + G YV +S YL+A++ R L+ DF +A G+DV+LTP P +A +E Sbjct: 342 MMLENGRYVPASA-----YLQAQRARHLLTDDFLKAL-TGIDVLLTPAMPLTAPRADDDE 395 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S+ + F N+ GLP++S+P +P+ LQLIG+PF E T+ +G Sbjct: 396 LYEKSLRLTH---FAAPTNLTGLPSLSMPCGFSPSGLPINLQLIGRPFDEATVLGIGYAY 452 Query: 481 EKEAGYFRPH 490 E + + H Sbjct: 453 ELNTDWHKKH 462 >gi|15921546|ref|NP_377215.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus tokodaii str. 7] gi|23821624|sp|Q971U6|GATA_SULTO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|15622332|dbj|BAB66324.1| 476aa long hypothetical glutamyl-tRNA (gln) amidotransferase subunit A [Sulfolobus tokodaii str. 7] Length = 476 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 178/468 (38%), Positives = 274/468 (58%), Gaps = 17/468 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K++ E V+ + IE ++ A+I + + E +++ N + L GI Sbjct: 13 LLNKNLDIDEYVERTYERIEKIEKKIKAFITI--RDKEEVKREVREKLKNPKGK-LSGIL 69 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I IKD +TKGI T S +L+ + P Y++TV +KL GAV+LGK NMDEFAMGS+ ET Sbjct: 70 IAIKDNISTKGIRTTCASRMLEDYVPPYDATVIEKLKQEGAVILGKTNMDEFAMGSTTET 129 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 SY+GP +PW + TPGGSSGGS AA+A + ++G+DTGGSIR PA++ G Sbjct: 130 SYFGPTRNPWDL-----ERTPGGSSGGSGAALAAGIVDIALGSDTGGSIRAPAAYNAVFG 184 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KP+YG SR G++++A SL+Q G + + D A+L I+G D DAT ++ E+ Sbjct: 185 LKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLALLYSIISGDDPKDATTIHFEPQVPEK 244 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 ++ + + + K+ P + + + L GA I E++L + +YALPAYY Sbjct: 245 V---ELKDVKIAVLKDIVEASDKPVVS-IFNSTLDKLSSEGAIIKEVNLGYAEYALPAYY 300 Query: 316 IISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 II+ +EASSNLAR+DGVRYG + + E + R GFG EVK RI++G+++LS+ Sbjct: 301 IIAMSEASSNLARFDGVRYGYSKYSEGNWRETFAKNRGEGFGIEVKRRILLGSFILSAGY 360 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 Y+ Y++A KIR LIK + ++ D+I +PT P +G+ + M + D+ Sbjct: 361 YEEFYIKALKIRRLIKDNVDNILKE-FDLIASPTMPILPPKIGEVVEDPIKMYAM--DLN 417 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 TV N+AG+PA+S PA +P+GLQL+G+ + + ++ IEK Sbjct: 418 TVIANLAGVPALSQPAGFY-NNLPIGLQLMGRYLSDYYIMAISAKIEK 464 >gi|33241339|ref|NP_876280.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila pneumoniae TW-183] gi|33235847|gb|AAP97937.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Chlamydophila pneumoniae TW-183] Length = 492 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 164/444 (36%), Positives = 266/444 (59%), Gaps = 13/444 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGI 78 +++A + + IE + Q+ A+I + ++A AE DK+ G+ L G+P+GI Sbjct: 17 ELTATGVTQHFFHRIEEAEGQVGAFISLCKEQALEQAELIDKKRSRGEPLGKLAGVPVGI 76 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G+ T S +L+ ++P +++TV +++ ++LGKLNMDEFAMGS+ S + Sbjct: 77 KDNIHVTGLKTTCASRVLENYQPPFDATVVERIKKEDGIILGKLNMDEFAMGSTTLYSAF 136 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 P +PW D + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+F G VG KP Sbjct: 137 HPTHNPW---DLSR--VPGGSSGGSAAAVSARFCPVALGSDTGGSIRQPAAFCGVVGFKP 191 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 +YG SR G+++FA SLDQ G + TV D A+++ +G D DAT + L Sbjct: 192 SYGAVSRYGLVAFASSLDQIGPLANTVEDVALMMDVFSGRDPKDATSREFFRDSFMSKLS 251 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + +G+P+ + L+ L I + + ++ + G +V++ L +A+ YYI++ Sbjct: 252 TEVPKV-IGVPRTF-LEGLRDDIRENFFSSLAIFEGEGTHLVDVELDILSHAVSIYYILA 309 Query: 319 PAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AEA++NLAR+DGVRYG R + I ++Y+ +R GFG+EV RI++G YVLS+ + Sbjct: 310 SAEAATNLARFDGVRYGYRSPQAHTISQLYDLSRGEGFGKEVMRRILLGNYVLSAERQNV 369 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +Y +A +R I + F AFE+ +++ P + AF +G+ + + D++TVA Sbjct: 370 YYKKATAVRAKIVKAFRTAFEK-CEILAVPVCSSPAFEIGEILD---PVTLYLQDIYTVA 425 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 +N+A LPAI+VP+ ++ +PLGL Sbjct: 426 MNLAYLPAIAVPSGFSKEGLPLGL 449 >gi|51598600|ref|YP_072788.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Borrelia garinii PBi] gi|81610062|sp|Q661S5|GATA_BORGA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|51573171|gb|AAU07196.1| Glu-tRNA(Gln) amidotransferase, subunit A [Borrelia garinii PBi] Length = 481 Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 171/487 (35%), Positives = 275/487 (56%), Gaps = 15/487 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLDIAKRYDDC 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + DL G+PI +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LKNCELEDLPLIGMPIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K NMDEFAMGS+ E S YG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 KTNMDEFAMGSTGEFSCYGATLNPLNR-----EYVIGGSSGGSAAVVASFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G D+ Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGADK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ + +QG + + KE D + + ++ + L GA I Sbjct: 235 MDSTSVDI-FDDFYPLKTEPLQGKNLALIKELSEDLMDKNVASSFAKFKFDLLSKGANIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRISENLSLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 K RI++G Y+LS +Y +A +I + LI F + FE D I+TPT+ F +G Sbjct: 354 KRRIILGNYLLSEGYDAKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRVGL 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M Y+D+ TV N+ G PAIS+P + ++ + +G+Q+IG+ ++ L S + Sbjct: 413 DFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDKEGLSIGMQIIGRSKKDFELLSFSK 470 Query: 479 IIEKEAG 485 + +E G Sbjct: 471 NVIRELG 477 >gi|121711842|ref|XP_001273536.1| glutamyl-tRNA amidotransferase, A subunit, putative [Aspergillus clavatus NRRL 1] gi|119401688|gb|EAW12110.1| glutamyl-tRNA amidotransferase, A subunit, putative [Aspergillus clavatus NRRL 1] Length = 508 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 181/496 (36%), Positives = 274/496 (55%), Gaps = 50/496 (10%) Query: 33 AIENSNSQMNAYIEVVAQKARAAAEESD---KRIINGDARDLEGIPIGIKDCFATKGIHT 89 A SN+ +NA+I V + + D +R + ++G I +KD T+ T Sbjct: 12 ANSKSNAALNAFITTVQRTGSWREQVKDAELRRELGKPKSKMDGRFIAVKDNICTRDYPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S IL + Y +TV + L + GA++ GK N+DEF MGS + S++GPV SP + Sbjct: 72 TCASGILAKYTSPYNATVVELLLEAGAIVAGKTNLDEFGMGSHSVHSWFGPVKSPLADQE 131 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + GGSSGGS+ AVA C A++GTDTGGSIR PA++TGTVG KP+YG SR G++ Sbjct: 132 G-QILSAGGSSGGSAVAVATDQCHAALGTDTGGSIRLPAAYTGTVGFKPSYGLVSRWGVV 190 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT----------CVNLPVPDYERALDQ 259 ++A SLD GI+ + + L + + +D D T +L P + Sbjct: 191 AYANSLDTVGILAKDTSSARDLFRILNQHDPRDPTNLSAFSRSRISAHLERPALASRMTS 250 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 S + +G+P EY + L P++ + W + + +L+D G I +SLP T+ AL AYY+++P Sbjct: 251 S--PLRIGVPIEYNIHELDPSVRRAWSRSLRYLRDQGHTIHPVSLPATRLALSAYYVLAP 308 Query: 320 AEASSNLARYDGVRYGLRVEGKDI-----LEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 AEASSNLA+YDGVRYG R +G D +Y TR GFG EVK RI++G + LS+ Sbjct: 309 AEASSNLAKYDGVRYGYRFDGPDSDGQPENYLYAKTRGDGFGSEVKRRILLGAFSLSADT 368 Query: 375 YDSHYLRARKIRTLIKRDFTEAF--------------------EQGVDVILTPTTPTSAF 414 D+++++A+++R LI+RDF F E VDV++ PT P+ Sbjct: 369 IDNYFIQAQRVRRLIQRDFNTVFKAEQPLAPAHHTAAGNQASKEADVDVLICPTAPSCPP 428 Query: 415 PLGK---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKK-----MPLGLQLIG 465 + + +++ S+ NDVFTV ++AGLPA+SVP + E K +G+Q+IG Sbjct: 429 RMSEIMDKKSALASLDAYTNDVFTVPASLAGLPAVSVPVTVGAEDKDSGDMNQVGIQVIG 488 Query: 466 QPFREETLFSVGQIIE 481 Q +E + VG+ + Sbjct: 489 QYGDDELVLKVGESLH 504 >gi|15617932|ref|NP_224216.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila pneumoniae CWL029] gi|15835538|ref|NP_300062.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila pneumoniae J138] gi|16753038|ref|NP_445311.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Chlamydophila pneumoniae AR39] gi|6225413|sp|Q9Z9G7|GATA_CHLPN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|4376258|gb|AAD18161.1| Glu tRNA Gln Amidotransferae (A subunit) [Chlamydophila pneumoniae CWL029] gi|7189687|gb|AAF38572.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Chlamydophila pneumoniae AR39] gi|8978376|dbj|BAA98213.1| Glu tRNA Gln amidotransferae (A subunit) [Chlamydophila pneumoniae J138] Length = 492 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 164/444 (36%), Positives = 266/444 (59%), Gaps = 13/444 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGI 78 +++A + + IE + Q+ A+I + ++A AE DK+ G+ L G+P+GI Sbjct: 17 ELTATGVTQHFFHRIEEAEGQVGAFISLCKEQALEQAELIDKKRSRGEPLGKLAGVPVGI 76 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G+ T S +L+ ++P +++TV +++ ++LGKLNMDEFAMGS+ S + Sbjct: 77 KDNIHVTGLKTTCASRVLENYQPPFDATVVERIKKEDGIILGKLNMDEFAMGSTTLYSAF 136 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 P +PW D + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+F G VG KP Sbjct: 137 HPTHNPW---DLSR--VPGGSSGGSAAAVSARFCPVALGSDTGGSIRQPAAFCGVVGFKP 191 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 +YG SR G+++FA SLDQ G + TV D A+++ +G D DAT + L Sbjct: 192 SYGAVSRYGLVAFASSLDQIGPLANTVEDVALMMDVFSGRDPKDATSREFFRDSFMSKLS 251 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + +G+P+ + L+ L I + + ++ + G +V++ L +A+ YYI++ Sbjct: 252 TEVPKV-IGVPRTF-LEGLRDDIRENFFSSLAIFEGEGTHLVDVELDILSHAVSIYYILA 309 Query: 319 PAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AEA++NLAR+DGVRYG R + I ++Y+ +R GFG+EV RI++G YVLS+ + Sbjct: 310 SAEAATNLARFDGVRYGYRSPQAHTISQLYDLSRGEGFGKEVMRRILLGNYVLSAERQNV 369 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +Y +A +R I + F AFE+ +++ P + AF +G+ + + D++TVA Sbjct: 370 YYKKATAVRAKIVKAFRTAFEK-CEILAMPVCSSPAFEIGEILD---PVTLYLQDIYTVA 425 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 +N+A LPAI+VP+ ++ +PLGL Sbjct: 426 MNLAYLPAIAVPSGFSKEGLPLGL 449 >gi|269302879|gb|ACZ32979.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chlamydophila pneumoniae LPCoLN] Length = 492 Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 164/444 (36%), Positives = 266/444 (59%), Gaps = 13/444 (2%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGI 78 +++A + + IE + Q+ A+I + ++A AE DK+ G+ L G+P+GI Sbjct: 17 ELTATGVTQHFFHRIEEAEGQVGAFISLCKEQALEQAELIDKKRSRGEPLGKLAGVPVGI 76 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G+ T S +L+ ++P +++TV +++ ++LGKLNMDEFAMGS+ S + Sbjct: 77 KDNIHVTGLKTTCASRMLENYQPPFDATVVERIKKEDGIILGKLNMDEFAMGSTTLYSAF 136 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 P +PW D + PGGSSGGS+AAV+ C ++G+DTGGSIRQPA+F G VG KP Sbjct: 137 HPTHNPW---DLSR--VPGGSSGGSAAAVSARFCPVALGSDTGGSIRQPAAFCGVVGFKP 191 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 +YG SR G+++FA SLDQ G + TV D A+++ +G D DAT + L Sbjct: 192 SYGAVSRYGLVAFASSLDQIGPLANTVEDVALMMDVFSGRDPKDATSREFFRDSFMSKLS 251 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + +G+P+ + L+ L I + + ++ + G +V++ L +A+ YYI++ Sbjct: 252 TEVPKV-IGVPRTF-LEGLRDDIRENFFSSLAIFEGEGTHLVDVELDILSHAVSIYYILA 309 Query: 319 PAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AEA++NLAR+DGVRYG R + I ++Y+ +R GFG+EV RI++G YVLS+ + Sbjct: 310 SAEAATNLARFDGVRYGYRSPQAHTISQLYDLSRGEGFGKEVMRRILLGNYVLSAERQNV 369 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +Y +A +R I + F AFE+ +++ P + AF +G+ + + D++TVA Sbjct: 370 YYKKATAVRAKIVKAFRTAFEK-CEILAMPVCSSPAFEIGEILD---PVTLYLQDIYTVA 425 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 +N+A LPAI+VP+ ++ +PLGL Sbjct: 426 MNLAYLPAIAVPSGFSKEGLPLGL 449 >gi|222824159|ref|YP_002575733.1| glu-tRNAGln amidotransferase, subunit A [Campylobacter lari RM2100] gi|254790383|sp|B9KD43|GATA_CAMLR RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|222539381|gb|ACM64482.1| glu-tRNAGln amidotransferase, subunit A [Campylobacter lari RM2100] Length = 454 Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 181/418 (43%), Positives = 261/418 (62%), Gaps = 18/418 (4%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +G+P+ IKD + K S IL G+ Y+++V L N G+ NMDEFAMGS Sbjct: 49 DGVPVAIKDNISVKDWELTCASKILQGYVAPYDASVITNLRKNNLSPFGRCNMDEFAMGS 108 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++ TS+YG ++P D+T PGGSSGGS+AAVA L AS+G+DTGGS+RQPA+F Sbjct: 109 TSATSFYGKTLNPH---DNTK--VPGGSSGGSAAAVASGLAIASLGSDTGGSVRQPAAFC 163 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP+YGR SR G+ +++ SLDQ G++T+ V+D+AIL IAGYDE D+T N+ Sbjct: 164 GCVGFKPSYGRVSRYGLAAYSSSLDQIGVLTQNVKDAAILYDVIAGYDEKDSTSANIAFE 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L+ + + + + + K Y +D + + + + I LK G +IV L + + + Sbjct: 224 PTAPKLNAN-KKLKIAVIKNY-IDQTNDDVKQALLKTIDMLKANGYEIVYKDLMDSTFDV 281 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVL 370 AYYII+ AEAS+NL+RYDGVRYG R E D L +MY N+RS GFG+EVK RI++GT+VL Sbjct: 282 AAYYIIAAAEASANLSRYDGVRYGRRSEKCDNLSQMYINSRSEGFGEEVKRRILLGTFVL 341 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 SS YD++Y++A+K R IK+ + E D+I P P+ AF N+ + +Y Sbjct: 342 SSGYYDAYYIKAQKARRFIKQKYEEILND-CDLIFMPVAPSVAFGF----NDVKTPIQMY 396 Query: 431 -NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL----FSVGQIIEKE 483 DVFT++VN+AGL ISVP E + + QLI + + E+TL S+ +II+ + Sbjct: 397 LEDVFTISVNLAGLGGISVPVGKNENGLNISAQLICKAYDEQTLLDGALSLEEIIKNK 454 >gi|119179404|ref|XP_001241295.1| hypothetical protein CIMG_08458 [Coccidioides immitis RS] Length = 499 Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 176/467 (37%), Positives = 265/467 (56%), Gaps = 51/467 (10%) Query: 61 KRIINGDARDLEGIP--------IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 +R+ + DAR G P I IKD T+ + T S IL+ F + +TV + L Sbjct: 35 ERVKDADARRKRGAPKSSLDGKLIAIKDNICTRDVRTTCASAILENFTSPFNATVVELLE 94 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 ++GA++ GK N+DEF MGS + S++GPV D + GGSSGGS+ AVA C Sbjct: 95 ESGAIVAGKTNLDEFGMGSHSTYSHFGPV--KGLRADDLGHVSAGGSSGGSAIAVATEQC 152 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A++GTDTGGS+R PA++TGTVG KP+YG SR G++++A SLD GII + + Sbjct: 153 YAALGTDTGGSVRLPAAYTGTVGFKPSYGLLSRWGVVAYANSLDTVGIIGANTSTVSQVF 212 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSI--------QGMTVGIPKEYRLDYLSPTIDKT 284 + YD D T ++ +D+ I + + +G+P EY + L P + +T Sbjct: 213 GVLNRYDHRDPTSISKAT---RSRIDEIIGSTSKTRSERLRIGVPIEYNILELDPFVRET 269 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDI 343 W++ I LK+ G + +SLP T+ AL AYY+++PAEASSNLA+YDGVRYG R ++ D Sbjct: 270 WRKSIQHLKNQGHTVHPVSLPATKQALSAYYVLAPAEASSNLAKYDGVRYGTRDLDSPDN 329 Query: 344 L--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE--- 398 +Y R GFG EVK RI++G + LS+ D+++++A+K+R L++ DF + F Sbjct: 330 TGGYLYARNRGSGFGPEVKRRIVLGAFSLSAEAIDNYFIQAQKVRRLVQSDFNKVFRLHN 389 Query: 399 ---------------------QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 + VDV++ PT P+ L EN + + + NDVFTV Sbjct: 390 PLLQANLTSHPKALESDGDTAEKVDVLVCPTAPSPPPLLSSLENAAPTEAYT-NDVFTVP 448 Query: 438 VNMAGLPAISVPAALC--EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++AGLPA+SVP E++ P+G+Q+IGQ ++ + VG +EK Sbjct: 449 ASLAGLPALSVPVTPGDREQESPIGIQVIGQFGDDQLVLDVGNTLEK 495 >gi|325519883|gb|EGC99155.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia sp. TJI49] Length = 367 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 17/326 (5%) Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTDT GSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A+A Sbjct: 12 GTDTDGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMA 71 Query: 237 GYDECDATCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 G+DE D+T + D+ R L Q + G+ +G+P EY D L+ + T Sbjct: 72 GFDERDSTSLERDDEDFTRHLGQPWAAGNDAGKPLAGLRIGLPNEYFGDGLADDVRATID 131 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE 345 + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R + D+L+ Sbjct: 132 AALKQYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAQYGDLLD 191 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 MY+ +R+ GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ DVI+ Sbjct: 192 MYKKSRAEGFGAEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIM 250 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQ 462 P +PT A+ LG + ++ M DV+T++V++AGLP +SVP K P+GLQ Sbjct: 251 GPASPTVAWDLGAKGDDPVQM--YLADVYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQ 308 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFR 488 +IG F E + V ++ + + Sbjct: 309 IIGNYFNEARMLQVADAFQRATDWHK 334 >gi|325275938|ref|ZP_08141782.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas sp. TJI-51] gi|324098933|gb|EGB96935.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas sp. TJI-51] Length = 309 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 140/294 (47%), Positives = 200/294 (68%), Gaps = 5/294 (1%) Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPA+ T G+KPTYGR SR G+I++A SLDQ G + RT D A+LL+ +AG+D D+T Sbjct: 4 QPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDSTS 63 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + PVPDY L S+QG+ +G+PKEY L P I Q + L+ GA + EISLP Sbjct: 64 IEEPVPDYSANLGASLQGLRIGLPKEYFGAGLDPRIADLVQASVKELEKLGAVVKEISLP 123 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 + Q+A+ AYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R GFG EV+ RIM Sbjct: 124 NMQHAIAAYYVIAPAEASSNLSRFDGVRFGYRCEAPKDLTDLYKRSRGEGFGVEVQRRIM 183 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y++A++IR LIK DF AF + VD+IL PTTP A+ LG + +S Sbjct: 184 VGTYALSAGYYDAYYVKAQQIRRLIKNDFMAAFNE-VDLILGPTTPNPAWKLGAK--SSD 240 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D++T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 241 PVAAYLEDIYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 293 >gi|169350956|ref|ZP_02867894.1| hypothetical protein CLOSPI_01733 [Clostridium spiroforme DSM 1552] gi|169292018|gb|EDS74151.1| hypothetical protein CLOSPI_01733 [Clostridium spiroforme DSM 1552] Length = 482 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 166/481 (34%), Positives = 272/481 (56%), Gaps = 13/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E + + +K+I + + + ++NA++ + +A +E D + + Sbjct: 5 SIEELHNLIINKEIDLNKYYEELFEEATLQQERLNAFVTITKDEALKNIKELDVK----E 60 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L+GIP KD + TKGI T A S +L+ + P Y +TV +KL++ G ++GK +MDE Sbjct: 61 DELLKGIPAVFKDNYNTKGIKTTASSKMLEDYVPVYNATVVEKLYNQGISLVGKASMDEL 120 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG +N+++ GPV +PW S GGSSGGS+A V L ++G+DTG SIR+P Sbjct: 121 AMGGTNKSALTGPVFNPWDS-----SRIAGGSSGGSAALVGCGLVPFALGSDTGDSIRKP 175 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A F G VG KPT+GR SR G+I +A SLD G TR VRD AI+ +A+AG D+ D T N Sbjct: 176 AGFCGIVGFKPTWGRISRFGVIPYASSLDHVGAFTRNVRDMAIVTEALAGRDDRDMTSSN 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH- 306 PVP Y + L+ I+G+ + + K + + I + ++ K GA + E+ +P+ Sbjct: 236 RPVPHYLKDLNSDIKGIKIAVLKTVSDEIRNEDIKNNFVHVVNTFKQLGAIVEEVEIPNH 295 Query: 307 -TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + LP Y II+ +EA+SN + DG++YG R G E+ N+R+ GFG +K R ++ Sbjct: 296 LARAILPTYTIIANSEATSNHSCLDGIKYGDRQPGNSTDEVMINSRTDGFGAHIKRRFIL 355 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G L++ + + +A+++R LI + + + Q D+ILTP + A L ++ S Sbjct: 356 GNLALATENQEKMFRKAQRVRRLIVAELNKIY-QDYDIILTPNGGSVAPKLDDANDDRLS 414 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +I + N AG P++S+P+ E MP+ + L+G+ F E+T+F+V +E+ G Sbjct: 415 DEYIILENHLALGNFAGTPSLSLPSGFSE-GMPIAVNLMGRLFEEQTVFNVAYALEQALG 473 Query: 486 Y 486 + Sbjct: 474 F 474 >gi|167561086|ref|ZP_02354002.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia oklahomensis EO147] Length = 342 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 145/320 (45%), Positives = 208/320 (65%), Gaps = 17/320 (5%) Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + + D A+LL A+A Sbjct: 12 GTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQCAADCALLLNAMA 71 Query: 237 GYDECDATCVNLPVPDYERALDQS----------IQGMTVGIPKEYRLDYLSPTIDKTWQ 286 G+DE D+T + DY R L ++ + G+ +G+P EY L+ + Sbjct: 72 GFDERDSTSLERADEDYTRHLGKTWSAGADAGKPLAGLRIGLPNEYFGAGLADDVRAAID 131 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE 345 + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D+L+ Sbjct: 132 AALKQYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLD 191 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 MY+ +R+ GFG EVK RI++GTYVLS YD++YL+A+KIR +I +DF EAF+Q DVI+ Sbjct: 192 MYKKSRAEGFGPEVKRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKQ-CDVIM 250 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQ 462 P +P+ A+ +G + ++ M D++T++V++AGLP +SVP K P+GLQ Sbjct: 251 GPASPSVAWDIGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQ 308 Query: 463 LIGQPFREETLFSVGQIIEK 482 +IG F E + V ++ Sbjct: 309 IIGNYFDEARMLQVADAFQR 328 >gi|219685424|ref|ZP_03540242.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia garinii Far04] gi|219672980|gb|EED30001.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia garinii Far04] Length = 481 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 170/487 (34%), Positives = 277/487 (56%), Gaps = 15/487 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDVNGYIEFF-DDSLDIAKRYDDC 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E S YG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 RTNMDEFAMGSTGELSCYGATLNPLNR-----EYVIGGSSGGSAAVVASFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G D+ Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGADK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ +S+QG + + KE D + + ++ + L GA I Sbjct: 235 MDSTSVDI-FDDFYPLKIESLQGKNLALIKELSEDLMDKNVASSFAKFKFDLLSKGANIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRISENLSLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 K RI++G Y+LS +Y++A +I + LI F++ FE D I+TPT+ F +G Sbjct: 354 KRRIILGNYLLSEGYDAKYYVKACEILQNLIIPKFSKLFES-CDFIITPTSFVKPFRVGL 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M Y+D+ TV N+ G PAIS+P + ++ + +G+Q+IG+ ++ L S + Sbjct: 413 DFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDKEGLSIGMQIIGRSKKDFELLSFSK 470 Query: 479 IIEKEAG 485 + +E G Sbjct: 471 NVIRELG 477 >gi|297530427|ref|YP_003671702.1| amidase [Geobacillus sp. C56-T3] gi|297253679|gb|ADI27125.1| Amidase [Geobacillus sp. C56-T3] Length = 470 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 185/486 (38%), Positives = 267/486 (54%), Gaps = 43/486 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN +SE L++K++S VELVD ++ IE N ++NAYIEV A+KAR AE ++ I Sbjct: 5 LNTKTISELSPLLKNKEVSPVELVDDVLEQIETLNDKLNAYIEVTAEKARKQAELAESEI 64 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+ R L GIPI IKD T S I FRP Y +TV +KL + GAV GK Sbjct: 65 RSGNYRGPLHGIPIAIKDILYVANETTTMGSKIHRNFRPTYSATVIEKLTEAGAVFPGKT 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E+A G++N ++GP +PW + PGGSSGGS A A + AS+GTDTGG Sbjct: 125 NLHEYAWGATNNNPHFGPARNPWDP-----ERIPGGSSGGSGVATAAHMTIASLGTDTGG 179 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+SF G VG+KPTYG S+ G A SLD G + +T RD+A +L+A+AGYD D Sbjct: 180 SIRIPSSFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKTARDAAYILEAMAGYDPKD 239 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T N P Y +S++G+ +GI + Y D++ +++ +Q I+ L+ GA + + Sbjct: 240 PTSTNAPATSYSTQFMESVKGVKIGI-EPYFFDHVDEGVERAVKQAIASLEREGAVVETV 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +P QYA A I +EAS+ + + VE R FG +V+ Sbjct: 299 RIPTLQYAQYAEMITILSEASA-------IHHNHLVE-----------REEDFGDDVRFL 340 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---- 418 + +G L S YL A++IR + +F E F + VDV++TPT P +G+ Sbjct: 341 LKLGE--LPSAV---DYLEAQQIRLKLDHEFMEIFNK-VDVLITPTIPFLPPKIGQDTVW 394 Query: 419 ---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 EE N + HI FT N+ GLP ++VP + +P+G+Q+IG F E T+ + Sbjct: 395 INGEEVN--FLDHIIR--FTGPFNLTGLPVVTVPCGFVQ-GLPVGMQIIGPAFGEGTILN 449 Query: 476 VGQIIE 481 V + E Sbjct: 450 VADVFE 455 >gi|224531998|ref|ZP_03672630.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia valaisiana VS116] gi|224511463|gb|EEF81869.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia valaisiana VS116] Length = 482 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 168/487 (34%), Positives = 274/487 (56%), Gaps = 14/487 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D+R Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYDER 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LKNCELEDLPLIGMLIAVKDNISIQNKSLTCASEILKGYVSPYDATVVKRLKNKGAIIIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E S YG ++P ++ GGSSGGS+A V+ F S+G+DT Sbjct: 120 RTNMDEFAMGSTCEFSCYGATLNPLNK-----EYVVGGSSGGSAAVVSAFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G D+ Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGADK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T +++ D+ +S+QG + + KE D + + ++ + L G I Sbjct: 235 MDSTSIDIFDDDFYPLKIESLQGKNLALIKELSEDLMDKNVASSFAKFKLDLLSKGINIK 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 295 EVSIEEINIVLSIYYTISPVEASSNLARYTGLCYGKRISENLSLNDFYFKHRSNFLSEEV 354 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 K RI++G Y+LS +Y +A +I + LI F + FE D I+TPT+ F +G Sbjct: 355 KRRIVLGNYLLSEGYDAKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRVGL 413 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M Y+D+ TV N+ G PAIS P + ++ + +G+Q+IG+ ++ L S + Sbjct: 414 DFDDPVKM--YYSDICTVIANLIGAPAISFPYSKDKEGLSIGMQIIGRSKKDFELLSFSK 471 Query: 479 IIEKEAG 485 + +E G Sbjct: 472 NVIRELG 478 >gi|216264000|ref|ZP_03435994.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia afzelii ACA-1] gi|215980044|gb|EEC20866.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia afzelii ACA-1] Length = 481 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 173/488 (35%), Positives = 277/488 (56%), Gaps = 17/488 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYDDF 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LRNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 RTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G ++ D A++LK G D+ Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFAHSIEDIALILKHTCGADK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ +S+QG + + KE D + + ++ + L G I Sbjct: 235 MDSTSVDI-FDDFYPLKIESLQGKNLAVIKELSEDLMDKNVASSFAKFKFDLLSKGINIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRMSENLSLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 K RI++G Y+L S YDS +Y +A +I + LI F + FE D I+TPT+ F +G Sbjct: 354 KRRIVLGNYLL-SEGYDSKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRVG 411 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ M Y+D+ TV N+ G PAIS+P + ++ + +G+Q+IG+ ++ L S Sbjct: 412 LDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDKEGLSIGMQIIGRSKKDFELLSFS 469 Query: 478 QIIEKEAG 485 + + +E G Sbjct: 470 KNVIRELG 477 >gi|170694435|ref|ZP_02885588.1| Amidase [Burkholderia graminis C4D1M] gi|170140569|gb|EDT08744.1| Amidase [Burkholderia graminis C4D1M] Length = 476 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 166/490 (33%), Positives = 263/490 (53%), Gaps = 44/490 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-D 67 ++E+ LR +D++ +LV++ ++ I + + ++I V Q+A S + G D Sbjct: 10 LTEAAQALRRRDVTPSQLVEASLERIAAHDPLLKSFITVFEQQALKVGAASGALLDAGHD 69 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ +KD A T A S +L + P ++ + KL GA+++GK NM EF Sbjct: 70 LGPLHGIPVALKDNIAVAHTRTTAGSRVLADWHPAEDAAIVTKLRQAGAILIGKTNMHEF 129 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G ++ +YG V +PW T +F P GSSGGS+ AVA C +IGTDTGGSIR P Sbjct: 130 AWGGTSANPHYGFVRNPW----DTSRF-PAGSSGGSAVAVAARFCFGAIGTDTGGSIRLP 184 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ++ GTVGI+PTYGR S GI+ A S+D AG +TRTV D A L IAG+D DA Sbjct: 185 SAVNGTVGIRPTYGRVSNRGIVPLAWSMDTAGPMTRTVEDCATLFGVIAGFDRADAGSAA 244 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P DY + L I+ + +G+ Y +L P + QQ + L++ GA +V++ + Sbjct: 245 QPCGDYLQTLADGIRHLRIGVIPSYFFHHLQPAVHGAVQQALDTLRELGAAVVDVPIDGI 304 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + + A I AE S+ R+ LR +D +G +V+ + +G Sbjct: 305 EDNISAQLTIEAAEPSAWHQRH------LRERPQD------------YGDDVRTLLEVGE 346 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--------- 418 +L+ +HY++A++ R +++ F EAF + VDV + PT P +A +G+ Sbjct: 347 LLLA-----THYIQAQRYRAVLRAAFIEAFHK-VDVFICPTLPFTATRVGETRVVIEDGV 400 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 EE+ ++ FT ++ GLPA++VP ++ +P+G+Q+IG+PF E TLF VG Sbjct: 401 EEDMLSAIMQ-----FTGIASLTGLPALNVPCGFDDEGLPVGMQIIGRPFDEATLFRVGH 455 Query: 479 IIEKEAGYFR 488 ++ + R Sbjct: 456 AFQQATAFHR 465 >gi|302829703|ref|XP_002946418.1| hypothetical protein VOLCADRAFT_86683 [Volvox carteri f. nagariensis] gi|300268164|gb|EFJ52345.1| hypothetical protein VOLCADRAFT_86683 [Volvox carteri f. nagariensis] Length = 381 Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 177/423 (41%), Positives = 238/423 (56%), Gaps = 63/423 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 + G+P+ IKD T+G+ T A S IL + P +++T KL GAV LGK NMDEF MG Sbjct: 1 MSGVPLAIKDNICTQGVRTTAGSQILRDYVPTFDATAVSKLRAAGAVFLGKTNMDEFGMG 60 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS E S Y P +PW + PGGSSGGS+AAVA CAA++G+DTGGSIRQPA F Sbjct: 61 SSTENSSYQPTRNPW-----DPERVPGGSSGGSAAAVAARECAAALGSDTGGSIRQPAHF 115 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+IS+A SLD G + TV D+A+LL Sbjct: 116 CGIVGLKPTYGRVSRYGLISYASSLDVIGPMAHTVEDAALLLNGGV-------------- 161 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 P+ RL S L D ++SLP Sbjct: 162 -----------------FPRVLRL---------------SSLPDFSPPCPQVSLPTFGLG 189 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LPAYY+++ +EASSNL+RYDGVRYG R G D+ ++ +R G G EVK RI++GTY Sbjct: 190 LPAYYVLALSEASSNLSRYDGVRYGARTAGASDLPSLFCGSRGEGLGPEVKRRILMGTYA 249 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS+ YD++Y RA+++RTL++R+ D +LTPT P+ A+ LG E +S + Sbjct: 250 LSAGYYDAYYKRAQQVRTLVQREMAATLAS-FDALLTPTAPSPAYRLG--EKSSDPLAMY 306 Query: 430 YNDVFTVAVNMAGLPAISVPAAL--------CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 D+ TV VN+AGLPA+ +PA C ++P+G+QLIG+ F E L + + E Sbjct: 307 KGDLMTVNVNLAGLPAVVLPAGFVSAGAGGECGVQLPIGMQLIGRAFDEVGLLQLAHVYE 366 Query: 482 KEA 484 + A Sbjct: 367 QTA 369 >gi|167756543|ref|ZP_02428670.1| hypothetical protein CLORAM_02080 [Clostridium ramosum DSM 1402] gi|237733142|ref|ZP_04563623.1| glutamyl-tRNAGln amidotransferase [Mollicutes bacterium D7] gi|167702718|gb|EDS17297.1| hypothetical protein CLORAM_02080 [Clostridium ramosum DSM 1402] gi|229383824|gb|EEO33915.1| glutamyl-tRNAGln amidotransferase [Coprobacillus sp. D7] Length = 482 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 166/481 (34%), Positives = 273/481 (56%), Gaps = 13/481 (2%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E + + +++I E + +E +++NA++ + + A ++ K + D Sbjct: 5 SIEELHNLIVNQEIDLNEYYYDLFKEVEFQQNRLNAFVTI----TKTQAMDNIKELKISD 60 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L+GIP KD + TKGI T A S +L+ + P Y++ V +KL++ G ++GK +MDE Sbjct: 61 EEILKGIPGVFKDNYNTKGIKTTASSKMLEDYVPVYDAAVVEKLYNEGVSLIGKSSMDEL 120 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG +N+++ GPV +PW S GGSSGGS+A V + ++G+DTG SIR+P Sbjct: 121 AMGGTNKSALTGPVYNPWDS-----SRIAGGSSGGSAALVGSGVVPFALGSDTGDSIRKP 175 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A F G VG KPT+GR SR G+I +A SLD G TR VRD AI+ +A+AG DE D T Sbjct: 176 AGFCGVVGFKPTWGRISRFGVIPYASSLDHVGAFTRNVRDMAIVTEALAGRDERDMTSST 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-H 306 PVP Y + L+ I+ M + + K + + I + ++ LK GA + E+ +P H Sbjct: 236 RPVPHYLKELNSDIRNMKIAVLKTVSNEIRNDDIKNNFNHVVATLKQLGACVEEVEIPVH 295 Query: 307 TQYA-LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A LP Y II+ +EA+SN + DG++YG R G E+ N+R+ GFG +K R ++ Sbjct: 296 LAKAILPTYTIIANSEATSNHSCLDGIKYGDRQPGSSTDEVMINSRTDGFGAHIKRRFIL 355 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G L++ + + +A+++R LI + + ++ D+ILTP + A L + ++ S Sbjct: 356 GNLALATENQERMFRKAQRVRRLIVEELNKIYDN-YDIILTPNGGSVAPKLDEANDDRLS 414 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ + N AG P+IS+P+ E MP+ + L+G+ F E+T+ +V +E+ G Sbjct: 415 DEYLILENHLALGNFAGTPSISIPSGFSE-GMPIAINLMGRLFEEQTVLNVAYALEQALG 473 Query: 486 Y 486 + Sbjct: 474 F 474 >gi|203284259|ref|YP_002221999.1| glu-tRNA amidotransferase, subunit A [Borrelia duttonii Ly] gi|201083702|gb|ACH93293.1| glu-tRNA amidotransferase, subunit A [Borrelia duttonii Ly] Length = 481 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 179/462 (38%), Positives = 261/462 (56%), Gaps = 22/462 (4%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGI 87 Y + + N +N Y+E A A+E D + G +DL GIPI +KD A K Sbjct: 28 YYKKVYEDNRDINGYVEFF-DDALEIAKEYDDLLSKGGGQDLPLLGIPIAVKDNIAIKNK 86 Query: 88 HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS 147 S IL G+ Y++TV ++L DNGA+++G+ NMDEFAMGSS E SYYG ++P Sbjct: 87 DLTCASEILQGYISPYDATVIKRLKDNGAIIIGRTNMDEFAMGSSCEFSYYGVTLNP--- 143 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 S ++ GGSSGGS+A VAG S+G+DTGGS+R PASF G +G KP+YG SR G Sbjct: 144 --SNKEYVVGGSSGGSAAVVAGGQAPFSLGSDTGGSVRLPASFAGVIGFKPSYGGLSRYG 201 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL---PVPDYERALDQSIQGM 264 + S++ SLDQ G ++ D A++LK G D D+T +++ P P L++ ++G Sbjct: 202 LSSYSSSLDQIGFFANSIDDVALILKYTCGIDTMDSTSIDIIQEPYP----LLNKPLKGT 257 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 + + KE+ D + I + + S L G +I EIS+ + L YY ISP EA+S Sbjct: 258 KLAVIKEFSKDLMEEDIYCEFSKFKSALLSKGVEIHEISIEAFNFVLSLYYSISPVEAAS 317 Query: 325 NLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 NLARY + YG R+ L + Y RS+ +EVK R+++G Y+LS +Y +A Sbjct: 318 NLARYTCLHYGKRLNDTLSLNDFYYKHRSLFLQEEVKRRVVLGNYLLSEGYDLEYYTKAC 377 Query: 384 KI--RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 KI LI + F E F I+TPT+ F +G EN + Y+D+ TV N+ Sbjct: 378 KIIENVLIPK-FDEIF-NNYSYIITPTSFLKPFKIG--ENFDDPLKMYYSDLCTVIANLI 433 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 G PA+S+P A +K +P+G+Q+IG+ R+ L S + I +E Sbjct: 434 GFPALSIPFAKDDKGLPIGMQVIGRVKRDFELLSFSKNIIEE 475 >gi|170703194|ref|ZP_02894001.1| Amidase [Burkholderia ambifaria IOP40-10] gi|170131891|gb|EDT00412.1| Amidase [Burkholderia ambifaria IOP40-10] Length = 351 Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 144/326 (44%), Positives = 210/326 (64%), Gaps = 17/326 (5%) Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + ++ D A+LL A++ Sbjct: 23 GTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMS 82 Query: 237 GYDECDATCVNLPVPDYERAL----------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 G+DE D+T + D+ R L D+ + G+ VG+P EY D L+ + + Sbjct: 83 GFDERDSTSLEREDEDFTRHLGQPWAAGNDADKPLAGLRVGLPNEYFGDGLADDVRASID 142 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE 345 + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVR+G R + D+L+ Sbjct: 143 AALKQYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRFGHRAAQYGDLLD 202 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 MY+ +R+ GFG EVK RI++G YVLS YD++YL+A+KIR +I +DF EAF+ DVI+ Sbjct: 203 MYKKSRAEGFGPEVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CDVIM 261 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQ 462 P +PT A+ LG + ++ M D++T++V++AGLP +SVP K P+GLQ Sbjct: 262 GPASPTVAWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPVGLQ 319 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFR 488 +IG F E + V ++ + + Sbjct: 320 IIGNYFNEARMLQVADAYQRATDWHK 345 >gi|160901696|ref|YP_001567277.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Petrotoga mobilis SJ95] gi|160359340|gb|ABX30954.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Petrotoga mobilis SJ95] Length = 453 Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 169/465 (36%), Positives = 264/465 (56%), Gaps = 24/465 (5%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 D+ +++ I+ I + ++N+ + + +KA N D D GIP +K Sbjct: 5 DLIGKNVIEESIKKIYEKDKEINSVLRI--EKAEG----------NKDG-DYFGIPFLVK 51 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D +G T S IL+ + Y +T ++L G ++GK NMDEFAMG++NE S +G Sbjct: 52 DNILVEGTKTTNGSKILENYNSPYTATAVERLLKAGFTVVGKTNMDEFAMGNTNEHSAFG 111 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 PV +P PGGSSGGS+AAVA S+G+DTGGS+RQPA+F G VG KP+ Sbjct: 112 PVRNPKDLAR-----VPGGSSGGSAAAVAAGYVPFSLGSDTGGSVRQPAAFCGVVGFKPS 166 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YG SR G+ +F+ SLDQ G+ V+D+ + + + G D D+T + D + ++ Sbjct: 167 YGMISRYGLTAFSSSLDQIGVFANNVKDARTVTEIMKGKDPKDSTTLEHD-KDLVKDVEI 225 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 + + IPK + + K +++ I++L+ GA + +P +Y++ YYII+P Sbjct: 226 DLSKTKICIPKVVYHENADDNVIKQFERAINFLRSKGAIVDVKDIPELEYSVAIYYIIAP 285 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 AEASSNL+RYDGV+YGLR + + MY++TR +GFG EVK RIM+GT+ LSS YD +Y Sbjct: 286 AEASSNLSRYDGVKYGLRNDALGLNRMYKSTREVGFGMEVKRRIMMGTFNLSSLYYDQYY 345 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 +A K+R L+ E ++I+TPT+P +G++ + + D+FT+ N Sbjct: 346 SKASKVRKLLSDKIKEVLND-YNLIMTPTSPVLPPKIGEKLK---PLDYYLMDIFTIPAN 401 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + G PAIS+P + +P G+Q IG+ ++E L ++ KE Sbjct: 402 LNGSPAISIPFGDVQ-GLPFGIQFIGRYMKDEELLTIADNFFKET 445 >gi|225555144|gb|EEH03437.1| glutamyl-tRNA amidotransferase subunit A [Ajellomyces capsulatus G186AR] Length = 521 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 190/517 (36%), Positives = 279/517 (53%), Gaps = 71/517 (13%) Query: 33 AIENSNSQMNAYIEVVAQKA--RAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 A + + + +NA+I + + R +SD R G + L+G + IKD T+ + T Sbjct: 12 ANQKTYASLNAFITPLQRAGPWRDRVRDSDTRRERGVTKSPLDGKLVAIKDNICTRDMPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S ILD + + +TV + L +GA++ GK N+DEF MGS + S++GPV + S Sbjct: 72 TCASRILDTYTSPFNATVVESLEKSGAIIAGKTNLDEFGMGSHSMHSHFGPVKNVTES-- 129 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + +PGGSSGGS+ AVA C A++GTDTGGS+R PA++TGTVG KP+YG SR G++ Sbjct: 130 RREPISPGGSSGGSAVAVATGQCYAALGTDTGGSVRLPAAYTGTVGFKPSYGHVSRWGVV 189 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG------ 263 ++A SLD G++ ++ + K I D D T NLP P L ++ Sbjct: 190 AYANSLDTVGVLGSSISTIREVYKTINHPDLHDPT--NLP-PATRTRLTAAVHNSSTTRS 246 Query: 264 -----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + +GIP EY + LSPT+ WQ+ I L+ G I+ +SLP T++AL AYY+++ Sbjct: 247 SPSPYLRIGIPTEYNIHELSPTVRTAWQRSIVHLQRMGHTILPVSLPATKHALAAYYVLA 306 Query: 319 PAEASSNLARYDGVRYGLR-VEGKDILE----MYENTRSIGFGQEVKHRIMIGTYVLSSR 373 PAEASSNLARYDGVRYG R + D E +Y ++R G G EVK RI++G + LS+ Sbjct: 307 PAEASSNLARYDGVRYGTRDTDAPDDAEPGGYLYASSRGKGLGSEVKRRILLGAFSLSAD 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAF---------------------------EQGVDVILT 406 D+++L+A+++R L++ DF F GVDV++ Sbjct: 367 AIDNYFLQAQRVRRLVQADFERVFRVKNPLLPAVDVDADVDGRDKKQIAGDNAGVDVLVV 426 Query: 407 PTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALC---------EKK 456 PT PT P E S Y ND+FTV ++AGLPA+SVP + E K Sbjct: 427 PTAPT--LPPTVESLKRASTVETYMNDIFTVPASLAGLPALSVPVQMRGLSTVGDGDESK 484 Query: 457 --------MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +G+Q IGQ +E + VG+++E G Sbjct: 485 GDGADAAFGSVGIQAIGQFGDDEMVLHVGEMLEGMHG 521 >gi|302686472|ref|XP_003032916.1| hypothetical protein SCHCODRAFT_67602 [Schizophyllum commune H4-8] gi|300106610|gb|EFI98013.1| hypothetical protein SCHCODRAFT_67602 [Schizophyllum commune H4-8] Length = 530 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 186/508 (36%), Positives = 277/508 (54%), Gaps = 72/508 (14%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 ++IE N+ NA + V A AA + R L G+P+ +KD T+ + T Sbjct: 35 KSIELKNAATNAMVFV--SDAPAALPNAAGR--------LRGLPVAVKDNICTRDMPTTC 84 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP---WRSM 148 S +L F +++TV + L +NGA ++GK N DEF MGS N S +GPV++P W Sbjct: 85 SSAMLKNFTSPFDATVVRLLRENGADIVGKTNCDEFGMGSLNIHSVHGPVVNPCNPWPPE 144 Query: 149 DSTD----------KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 + + +F+ GGSSGGS+AAVA +C A++GTDTGGSIR PAS+ G G+KP Sbjct: 145 EEAEADSDQRRIGKRFSAGGSSGGSAAAVAAGMCRAALGTDTGGSIRLPASYCGVSGLKP 204 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 +YG SR G++S+A SLD G++ D + I+ +D D T + PV A + Sbjct: 205 SYGLVSRWGVVSYADSLDCVGVLANGSEDVKDVFDTISPHDPRDPT--SAPVSARTAARE 262 Query: 259 QS--------------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 Q+ I G+ VG+P+EY L+P+ ++ ++ L GA IV ISL Sbjct: 263 QAEARMAEWRQPGSDDITGLRVGVPQEYFPASLAPSARAHLRRALATLAAHGATIVPISL 322 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P T YAL AYY+I+ AEASSNLARYDG++Y + + +Y TRS GFG+EV+ RI+ Sbjct: 323 PSTSYALSAYYVIASAEASSNLARYDGMQYAPGTDTSKVSNLYAQTRSAGFGKEVQRRIL 382 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-------------------QGVDVIL 405 +GTY LS+ +D+++L+A+++R L++ DF F VDV+L Sbjct: 383 LGTYALSADAFDNYFLQAQRVRQLVRDDFDRVFSLPNVSPSIEPRPRQPSPTTPAVDVLL 442 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV-----------PAALCE 454 + +A LG SG++ DV TV ++AGLPA+SV P A E Sbjct: 443 HLSAVGTAPELGAP---SGALDAYVQDVLTVPASLAGLPALSVALPTSEKSRGEPKAREE 499 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEK 482 MP+G+ ++GQ + + VG ++E+ Sbjct: 500 TNMPIGVSVVGQWGSDGMVLEVGGLLER 527 >gi|56419927|ref|YP_147245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus kaustophilus HTA426] gi|56379769|dbj|BAD75677.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus kaustophilus HTA426] Length = 470 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 184/486 (37%), Positives = 268/486 (55%), Gaps = 43/486 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN +SE L++K++S VELVD ++ IE N+++NAYIEV A+KAR AE ++ I Sbjct: 5 LNTKTISELSPLLKNKEVSPVELVDDVLEQIETLNNKLNAYIEVTAEKARKQAELAESEI 64 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+ R L GIPI IKD T S I FRP Y +TV +KL + GAV GK Sbjct: 65 RSGNYRGPLHGIPIAIKDILYVANETTTMGSKIHRNFRPTYSATVIEKLTEAGAVFPGKT 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E+A G++N ++GP +PW + PGGSSGGS A A + AS+GTDTGG Sbjct: 125 NLHEYAWGATNNNPHFGPARNPWDP-----ERIPGGSSGGSGVATAAHMTIASLGTDTGG 179 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+SF G VG+KPTYG S+ G A SLD G + +T RD+A +L+A+AGYD D Sbjct: 180 SIRIPSSFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKTARDAAYILEAMAGYDPKD 239 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T + P Y +S++G+ +GI + Y D++ +++ +Q I+ L+ GA + + Sbjct: 240 PTSTDAPATSYSTQFMESVKGVKIGI-EPYFFDHVDEGVERAVKQAIASLEREGAVVETV 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +P QYA A I +EAS+ + + VE R FG +V+ Sbjct: 299 RIPTLQYAQYAEMITILSEASA-------IHHNHLVE-----------REEDFGDDVRFL 340 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---- 418 + +G L S YL A++IR + +F E F + VDV++TPT P +G+ Sbjct: 341 LKLGE--LPSAV---DYLEAQQIRLKLDHEFMEIFNK-VDVLITPTIPFLPPKIGQDTVW 394 Query: 419 ---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 EE N + HI FT N+ GLP ++VP + +P+G+Q+IG F E T+ + Sbjct: 395 INGEEVN--FLDHIIR--FTGPFNLTGLPVVTVPCGFVQ-GLPVGMQIIGPAFGEGTILN 449 Query: 476 VGQIIE 481 V + E Sbjct: 450 VADVFE 455 >gi|160946942|ref|ZP_02094145.1| hypothetical protein PEPMIC_00903 [Parvimonas micra ATCC 33270] gi|158447326|gb|EDP24321.1| hypothetical protein PEPMIC_00903 [Parvimonas micra ATCC 33270] Length = 468 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 174/481 (36%), Positives = 270/481 (56%), Gaps = 20/481 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R+ S + + I+ IE+ +N +++ +K E + ++ N Sbjct: 1 MDILSIREDFISGKVDLISFYTDVIKRIEDK-KDLNIFLDFSKEKIMERVEFLNNKLKNK 59 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ + +KD KG + S IL+ + P + +T+ +L + AV+LGK+NMD Sbjct: 60 EKLGSLFGVSVSVKDNILVKGYKSTCGSKILENYSPIFNATIIDRLLEEDAVILGKVNMD 119 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETSY+G +P + PGGSS GS+++V+ L S+G+DTGGS+R Sbjct: 120 EFAMGGSGETSYFGATKNPL-----DESLIPGGSSSGSASSVSADLAMISLGSDTGGSVR 174 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF VG KPTYG SR G++S A SLDQ GI++ V+ +L I G D+ DA Sbjct: 175 NPASFCACVGYKPTYGMISRYGVVSMASSLDQVGILSSDVKSILPVLNTIGGLDKMDAVT 234 Query: 246 VNLPVPDYERALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + V D + D S++G+ TV + Y +D + I K +++ I LK+ GA I E+ Sbjct: 235 MRDAV-DIKEDKDFSLKGIKIATVSNIENYEIDEI---ILKDYKKAIENLKNQGAIIEEV 290 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQEVKH 361 + +++ Y +I +E SSN++R+DG+RYG R E D E++ NTRS GFG+EV+ Sbjct: 291 DFKYIKHSTNVYNVIMSSEVSSNMSRFDGIRYGYRTENYDSTRELFTNTRSEGFGEEVQR 350 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 RI +GT+ L+S + Y + ++R LI ++ + + D ILTPTT +G E++ Sbjct: 351 RIAMGTFYLASSNNQALYKKGLEVRDLISKEVNKVLSE-YDFILTPTTTCLPSKIGAEKD 409 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N ++ D F V VN AGLPAIS+P L KK+ +Q IG+ F +E L ++ E Sbjct: 410 N--ALKSYAGDTFNVPVNFAGLPAISIPLNL--KKIGGSVQFIGKRFDDERLLNLAMNFE 465 Query: 482 K 482 + Sbjct: 466 R 466 >gi|111115166|ref|YP_709784.1| Glu-tRNA(Gln) amidotransferase, subunit A [Borrelia afzelii PKo] gi|123047009|sp|Q0SNH0|GATA_BORAP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|110890440|gb|ABH01608.1| Glu-tRNA(Gln) amidotransferase, subunit A [Borrelia afzelii PKo] Length = 481 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 173/488 (35%), Positives = 276/488 (56%), Gaps = 17/488 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYDDF 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LRNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 RTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVAAFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G ++ D A++LK G D+ Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFAHSIEDIALILKHTCGADK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ +S+QG + + KE D + + ++ + L G I Sbjct: 235 MDSTSVDI-FDDFYPLKIESLQGKNLAVIKELGEDLMDKNVASSFAKFKFDLLSKGINIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRMSENLSLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDS-HYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 K RI++G Y+L S YDS +Y +A +I + LI F + FE D I+TPT+ F G Sbjct: 354 KRRIVLGNYLL-SEGYDSKYYSKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRAG 411 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++ M Y+D+ TV N+ G PAIS+P + ++ + +G+Q+IG+ ++ L S Sbjct: 412 LDFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDKEGLSIGMQIIGRSKKDFELLSFS 469 Query: 478 QIIEKEAG 485 + + +E G Sbjct: 470 KNVIRELG 477 >gi|326470272|gb|EGD94281.1| glutamyl-tRNA amidotransferase [Trichophyton tonsurans CBS 112818] Length = 505 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 182/495 (36%), Positives = 278/495 (56%), Gaps = 54/495 (10%) Query: 35 ENSNSQMNAYIEVVAQKA--RAAAEESD-KRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 + + + +NA+I + + A R A+ +D +R + L+G IG+KD T+ + T Sbjct: 14 QKTFASLNAFITPLERSATWREQAQAADHRRGKDVTISPLDGKLIGVKDNICTRELPTTC 73 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL F + +T + L + GA++ GK N+DEF MGS + S++GPV + Sbjct: 74 GSAILQDFTSPFNATAVELLENAGAIVAGKTNLDEFGMGSHSIHSHFGPVKN---KKGGE 130 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + ++ GGSSGGS+ AVA C A++GTDTGGS+R PA++TG +G KP+YG SR G++++ Sbjct: 131 EFYSAGGSSGGSAIAVATGQCHAALGTDTGGSVRLPAAYTGVLGFKPSYGLISRWGVVAY 190 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-------LPVPDYERALDQSIQGM 264 A SLD GI + + + + YD D T V+ L E A ++ Sbjct: 191 ANSLDTVGIFAKDISTIHDIFDVVNRYDGRDPTSVSPTSRSRILAAVGEESARPTRLR-- 248 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 +G+P EY + LSP I WQ+ + +L+ G I ++LP T+ AL AYY+++PAEASS Sbjct: 249 -IGVPLEYNIHELSPEIRYAWQRALQYLQSKGHSIHPVTLPATKQALSAYYVLAPAEASS 307 Query: 325 NLARYDGVRYGLR-VEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 NL++YDGVRYG R +E D +Y NTR GFG EV+ RI++GT+ LS+ D+++++ Sbjct: 308 NLSKYDGVRYGTRDIESADNAGDYLYSNTRGKGFGAEVRRRILLGTFSLSADKIDNYFIQ 367 Query: 382 ARKIRTLIKRDFTEAF---------------------------EQGVDVILTPTTPTSAF 414 A+KIR L++ DF AF VDVI+ PT P++A Sbjct: 368 AQKIRRLVQSDFNSAFRLQHPLLHTPSTTLEARNFVDDGDAGRNAKVDVIICPTAPSTA- 426 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-----MP--LGLQLIGQP 467 P K N+ + NDVFTV ++AGLPA+SVP +K +P G+Q+IGQ Sbjct: 427 PAIKALENTSPIDAYTNDVFTVPCSLAGLPALSVPILFDGEKSKSQSVPRHAGVQVIGQF 486 Query: 468 FREETLFSVGQIIEK 482 + + VG+++E+ Sbjct: 487 GDDSMVLEVGKMLEE 501 >gi|241766794|ref|ZP_04764619.1| Amidase [Acidovorax delafieldii 2AN] gi|241362811|gb|EER58572.1| Amidase [Acidovorax delafieldii 2AN] Length = 311 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 202/306 (66%), Gaps = 5/306 (1%) Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-EC 241 SIRQPASF G GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL A+ G D + Sbjct: 1 SIRQPASFCGITGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAMCGPDPDR 60 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+T +++P ++ L+ SI G+ +GIP E+ + L+P + + + GAK+V Sbjct: 61 DSTSLDVPAENFSAKLNDSIDGLRIGIPAEFFGEGLAPDVRAAVDGALKEYEKLGAKLVP 120 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 ISLP T+ ++P YYII+PAEASSNL+R+DGV++G R + D+++MY+ TR+ GFG EVK Sbjct: 121 ISLPRTELSIPVYYIIAPAEASSNLSRFDGVKFGHRAKDYTDLVDMYKKTRAEGFGDEVK 180 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 RIMIG YVLS YD++YL+A+KIR +I DF AF+ D+I P P+ A+ LG Sbjct: 181 RRIMIGAYVLSHGYYDAYYLQAQKIRRMIADDFQNAFKD-CDLIAGPVAPSVAWKLGDHG 239 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N+ + D+FT+ ++AGLP +SVPA E MP+GLQL+G F+E L + + Sbjct: 240 ND--PLADYLADIFTLPGSLAGLPGMSVPAGFGEGGMPVGLQLLGNYFQEARLLNAAHRL 297 Query: 481 EKEAGY 486 ++ + Sbjct: 298 QQATDF 303 >gi|326481111|gb|EGE05121.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Trichophyton equinum CBS 127.97] Length = 505 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 182/495 (36%), Positives = 278/495 (56%), Gaps = 54/495 (10%) Query: 35 ENSNSQMNAYIEVVAQKA--RAAAEESD-KRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 + + + +NA+I + + A R A+ +D +R + L+G IG+KD T+ + T Sbjct: 14 QKTFASLNAFITPLERSATWREQAQAADHRRGKDVTISPLDGKLIGVKDNICTRELPTTC 73 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL F + +T + L + GA++ GK N+DEF MGS + S++GPV + Sbjct: 74 GSAILQDFTSPFNATAVELLENAGAIVAGKTNLDEFGMGSHSIHSHFGPVKN---KKGGE 130 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + ++ GGSSGGS+ AVA C A++GTDTGGS+R PA++TG +G KP+YG SR G++++ Sbjct: 131 EFYSAGGSSGGSAIAVATGQCHAALGTDTGGSVRLPAAYTGVLGFKPSYGLISRWGVVAY 190 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-------LPVPDYERALDQSIQGM 264 A SLD GI + + + + YD D T V+ L E A ++ Sbjct: 191 ANSLDTVGIFAKDISTIHDIFDVVNRYDGRDPTSVSPTSRSRILAAVGEESARPTRLR-- 248 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 +G+P EY + LSP I WQ+ + +L+ G I ++LP T+ AL AYY+++PAEASS Sbjct: 249 -IGVPLEYNIHELSPEIRYAWQRALQYLQSKGHSIHPVTLPATKQALSAYYVLAPAEASS 307 Query: 325 NLARYDGVRYGLR-VEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 NL++YDGVRYG R +E D +Y NTR GFG EV+ RI++GT+ LS+ D+++++ Sbjct: 308 NLSKYDGVRYGTRDIESADNAGDYLYSNTRGKGFGAEVRRRILLGTFSLSADKIDNYFIQ 367 Query: 382 ARKIRTLIKRDFTEAF---------------------------EQGVDVILTPTTPTSAF 414 A+KIR L++ DF AF VDVI+ PT P++A Sbjct: 368 AQKIRRLVQSDFNSAFRLQHPLLHTPSTTLEARDFVDDGDAGRNAKVDVIICPTAPSTA- 426 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-----MP--LGLQLIGQP 467 P K N+ + NDVFTV ++AGLPA+SVP +K +P G+Q+IGQ Sbjct: 427 PAIKALENTSPIDAYTNDVFTVPCSLAGLPALSVPILFDGEKSKSQSVPRHAGVQVIGQF 486 Query: 468 FREETLFSVGQIIEK 482 + + VG+++E+ Sbjct: 487 GDDSMVLEVGKMLEE 501 >gi|219684617|ref|ZP_03539560.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia garinii PBr] gi|219671979|gb|EED29033.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Borrelia garinii PBr] Length = 481 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 169/487 (34%), Positives = 274/487 (56%), Gaps = 15/487 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDVNGYIEFF-DDSLDIAKRYDDC 59 Query: 63 IINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + DL G+ I +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E S YG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 RTNMDEFAMGSTGELSCYGATLNPLNR-----EYVIGGSSGGSAAVVASFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF+G +G KP+YG SR G+ S+A S DQ G + ++ D A++LK G D+ Sbjct: 175 GGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGADK 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ +S+QG + + KE D + + ++ + L GA I Sbjct: 235 MDSTSVDI-FDDFYPLKIESLQGKNLALIKELSEDLMDKNVASSFAKFKFDLLSKGANIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRISENLSLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 RI++G Y+LS +Y++A +I + LI F + FE D I+TPT+ F G Sbjct: 354 TRRIILGNYLLSEGYDAKYYVKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRAGL 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++ M Y+D+ TV N+ G PAIS+P + ++ + +G+Q+IG+ ++ L S + Sbjct: 413 DFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDKEGLSIGMQIIGRSKKDFELLSFSK 470 Query: 479 IIEKEAG 485 + +E G Sbjct: 471 NVIRELG 477 >gi|154272926|ref|XP_001537315.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150415827|gb|EDN11171.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 527 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 189/523 (36%), Positives = 276/523 (52%), Gaps = 77/523 (14%) Query: 33 AIENSNSQMNAYIEVVAQKA--RAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 A + + + +N +I + + R +SD R G + L+G + IKD T+ + T Sbjct: 12 ANQKTYASLNVFITPLQRAGPWRDRVRDSDTRRERGVTKSPLDGKLVAIKDNICTRDMPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S ILD + + +TV + L +GA++ GK N+DEF MGS + S++GPV + S Sbjct: 72 TCASRILDTYTSPFNATVVESLEKSGAIIAGKTNLDEFGMGSHSMHSHFGPVKNVTES-- 129 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + +PGGSSGGS+ AVA C A++GTDTGGS+R PA++TGTVG KP+YG SR G++ Sbjct: 130 RREPISPGGSSGGSAVAVATGQCYAALGTDTGGSVRLPAAYTGTVGFKPSYGHISRWGVV 189 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG------ 263 ++A SLD G++ + + K I D D T NLP P L ++ Sbjct: 190 AYANSLDTVGVLGSNISTIREVYKTINHPDLHDPT--NLP-PAARTRLTAAVHNSSTTRS 246 Query: 264 -----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + +GIP EY + LSPT+ WQ+ I L+ G I+ +SLP T++AL AYY+++ Sbjct: 247 SPSPYLRIGIPTEYNIHELSPTVRTAWQRSIIQLQQMGHTILPVSLPATKHALAAYYVLA 306 Query: 319 PAEASSNLARYDGVRYGLR-VEGKDILE----MYENTRSIGFGQEVKHRIMIGTYVLSSR 373 PAEASSNLARYDGVRYG R + D +Y NTR G G EVK RI++G + LS+ Sbjct: 307 PAEASSNLARYDGVRYGTRDTDAPDDAGPGGYLYANTRGKGLGSEVKRRILLGAFSLSAD 366 Query: 374 CYDSHYLRARKIRTLIKRDFTEAF---------------------------------EQG 400 D+++L+A+++R L++ DF F G Sbjct: 367 AIDNYFLQAQRVRRLVQADFERVFRVKNPLLPAADVDVDVDVDVDVDGRDKRLIAGDNAG 426 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKM-- 457 VDV++ PT PT P E S Y ND+FTV ++AGLPA+SVP + M Sbjct: 427 VDVLVVPTAPT--LPPTVESLKRASTVETYMNDIFTVPASLAGLPALSVPVQVRGLSMVG 484 Query: 458 ---------------PLGLQLIGQPFREETLFSVGQIIEKEAG 485 +G+Q+IGQ +E + VG+++E G Sbjct: 485 DGDESKGDGADAAFGSVGIQVIGQFGDDEMVLHVGEMLEGMHG 527 >gi|301792493|ref|XP_002931213.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A homolog, partial [Ailuropoda melanoleuca] gi|281349521|gb|EFB25105.1| hypothetical protein PANDA_022056 [Ailuropoda melanoleuca] Length = 400 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/368 (39%), Positives = 214/368 (58%), Gaps = 22/368 (5%) Query: 138 YGPVISPW---RSMDSTDKFTPGGSSGGSSAAVAG------------FLCAASIGTDTGG 182 +GPV +PW + K P G S+ + G F C A++G+DTGG Sbjct: 8 FGPVKNPWSYSKQYREKRKQKPHGEKEDSNWLITGGSSGGSAAAVAAFTCFAALGSDTGG 67 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA+ G VG KP+YG SR G+I S+D GI+TR V D+A++L +AG+D D Sbjct: 68 STRNPAAHCGVVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAALVLGVLAGHDPKD 127 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V PV + + + +GIPKEY LS + W + + GAK++E+ Sbjct: 128 STTVQDPVKPFTLPTLTDVSKLCIGIPKEYLAPELSSEVRSFWSKAADLFESEGAKVIEV 187 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKH 361 SLPHT Y++ Y+++ +E +SN+AR+DG+ YG R + E MY TR GF V+ Sbjct: 188 SLPHTSYSIVCYHVLCTSEVASNMARFDGLEYGHRCDIDVSTEAMYAATRREGFNDVVRG 247 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGK 418 RI+ G + L Y++++++A+K+R LI DF F GVDV+LTPTT + A P K Sbjct: 248 RILSGNFFLLKENYENYFIKAQKVRRLIANDFVNVFNSGVDVLLTPTTLSEAVPYLEFIK 307 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E+N + S +D+FT AVNMAGLPA+SVP AL + +P+GLQ IG+ FR++ L ++ + Sbjct: 308 EDNRTRSA---QDDIFTQAVNMAGLPAVSVPVALSNQGLPIGLQFIGRAFRDQQLLTIAK 364 Query: 479 IIEKEAGY 486 EK+ + Sbjct: 365 WFEKQVQF 372 >gi|203287796|ref|YP_002222811.1| glu-tRNA amidotransferase, subunit A [Borrelia recurrentis A1] gi|201085016|gb|ACH94590.1| glu-tRNA amidotransferase, subunit A [Borrelia recurrentis A1] Length = 481 Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 178/462 (38%), Positives = 260/462 (56%), Gaps = 22/462 (4%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGI 87 Y + + N +N Y+E A A+E D + G +DL GIPI +KD A K Sbjct: 28 YYKKVYEDNRDINGYVEFF-DDALEIAKEYDDLLSKGGGQDLPLLGIPIAVKDNIAIKNK 86 Query: 88 HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS 147 S IL G+ Y++TV ++L DNGA+++G+ NMDEFAMGSS E SYYG ++P Sbjct: 87 DLTCASEILQGYISPYDATVIKRLKDNGAIIIGRTNMDEFAMGSSCEFSYYGVTLNP--- 143 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 S ++ GGSSGGS+A VA S+G+DTGGS+R PASF G +G KP+YG SR G Sbjct: 144 --SNKEYVVGGSSGGSAAVVARGQSPFSLGSDTGGSVRLPASFAGVIGFKPSYGGLSRYG 201 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL---PVPDYERALDQSIQGM 264 + S++ SLDQ G ++ D A++LK G D D+T +++ P P L++ ++G Sbjct: 202 LSSYSSSLDQIGFFANSIDDVALILKYTCGIDTMDSTSIDIIQEPYP----LLNKPLKGT 257 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 + + KE+ D + I + + S L G +I EIS+ + L YY ISP EA+S Sbjct: 258 KLAVIKEFSKDLMEEDIYCEFSKFKSALLSKGVEIHEISIEAVNFVLSLYYSISPVEAAS 317 Query: 325 NLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 NLARY + YG R+ L + Y RS+ +EVK R+++G Y+LS +Y +A Sbjct: 318 NLARYTCLHYGKRLNDTLSLNDFYYKHRSLFLQEEVKRRVVLGNYLLSEGYDLEYYTKAC 377 Query: 384 KI--RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 KI LI + F E F I+TPT+ F +G EN + Y+D+ TV N+ Sbjct: 378 KIIENVLIPK-FDEIF-NNYSYIITPTSFLKPFKIG--ENFDDPLKMYYSDLCTVIANLI 433 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 G PA+S+P A +K +P+G+Q+IG+ R+ L S + I +E Sbjct: 434 GFPALSIPFAKDDKGLPIGMQVIGRVKRDFELLSFSKNIIEE 475 >gi|239826826|ref|YP_002949450.1| amidase [Geobacillus sp. WCH70] gi|239807119|gb|ACS24184.1| Amidase [Geobacillus sp. WCH70] Length = 470 Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 180/485 (37%), Positives = 270/485 (55%), Gaps = 39/485 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N +SE ++SK IS VE+V ++ IE N ++NAYIEV A KA AE ++ I Sbjct: 5 FNEKTISELAPLVKSKQISPVEIVRDVLEQIEKLNGELNAYIEVTADKAHRQAETAEAEI 64 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++G+ R L GIP+ IKD S I F+P Y +TV +KL + GAV GKL Sbjct: 65 LSGNYRGPLHGIPVAIKDNIYIANETATMGSKIHRNFQPSYHATVVEKLSEAGAVFPGKL 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E+A G++N ++GPV +PW T++ + GGSSGGS A A + AS+GTDTGG Sbjct: 125 NLHEYAWGATNNNPHFGPVRNPW----DTERIS-GGSSGGSGVATAAHMTIASLGTDTGG 179 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+SF G VG+KPT+G S+ G A SLD G +T+TV D+A +L+AIAGYD D Sbjct: 180 SIRIPSSFCGIVGLKPTHGLVSKYGCFPLAWSLDHIGPMTKTVEDAAYVLEAIAGYDPKD 239 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T ++ P Y L +S++G+ +GI + Y D + ++K + IS L+ GA + + Sbjct: 240 PTSIDAPTARYSTQLTESVKGVKIGI-EPYFFDNVDAEVEKAVKNAISSLEREGAIVETV 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +P QYA A I +EA++ + +++E E+ FG +V+ Sbjct: 299 RIPTLQYAQYAEMITIISEANA-------------IHHHNLVEREED-----FGDDVRFL 340 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-- 420 + +G D YL+A++IR + R+F E F + VDVI+TPT P +G++ Sbjct: 341 LKLGEI---PSAVD--YLQAQQIRLQLDREFMEIFNK-VDVIITPTLPLLPPKIGQDTVL 394 Query: 421 ---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + HI FT N+ GLPA++VP K++P+G+Q++G F E + +V Sbjct: 395 LNGKEVNFLDHIIR--FTGPFNLTGLPAVTVPCGFA-KELPVGMQIVGPAFGEGKILNVA 451 Query: 478 QIIEK 482 + EK Sbjct: 452 DVFEK 456 >gi|302337562|ref|YP_003802768.1| glutamyl-tRNA(Gln) amidotransferase, subunit alpha [Spirochaeta smaragdinae DSM 11293] gi|301634747|gb|ADK80174.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Spirochaeta smaragdinae DSM 11293] Length = 467 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 171/446 (38%), Positives = 250/446 (56%), Gaps = 18/446 (4%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHT 89 Y ++ ++ ++ A++ +A E + +G L G+P +KD A KG+ Sbjct: 15 YCTYLDENDKKLGAFLSRTGAAEFQSALERSRSEASGQ-NPLRGMPFAVKDNIAVKGLPL 73 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S +LD Y +T +KL GAV++GK N+DEF MGSS + S G +PW Sbjct: 74 SCGSKMLDTLSSPYSATAVEKLQQAGAVVVGKTNLDEFGMGSSCDNSALGTTNNPWDVAR 133 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 SSGGS+A VA + ++G+DTGGSIRQPA+F GT G+KP+YG SR G++ Sbjct: 134 VAGG-----SSGGSAAVVAAGMVPFALGSDTGGSIRQPAAFCGTYGLKPSYGVVSRFGLV 188 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL-PVPDYERALDQSIQGMTVGI 268 ++A SL+ GII+ + I+ + G D D + P +R ++ G+ I Sbjct: 189 AYASSLETIGIISLDTQLLRIVFDTMRGQDPKDQSSRPFSPKASEKRQGEKPRIGVIADI 248 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 + L+P ++ +++ + ++ G +IVEI LP +Y +PAYY I+ AEAS+NLAR Sbjct: 249 ------EGLAPAMESAYRERLDLIRKKGYEIVEIELPMLEYVVPAYYTIASAEASANLAR 302 Query: 329 YDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 Y G+RYG R + D E+ E +R GFG EVK RI++GTYVL S D +YLRA+KIRT Sbjct: 303 YAGIRYGHRTDWADEHGELTEKSRDEGFGDEVKLRILLGTYVLRSGFKDQYYLRAQKIRT 362 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 L++ + AF Q VD IL+P PT+AFP G + D FT N+A +PA++ Sbjct: 363 LLRNEILSAF-QKVDQILSPVFPTTAFPHG--DAGLDQFQQKLADKFTATANLAAIPALA 419 Query: 448 VPAALCEKKMPLGLQLIGQPFREETL 473 PA E +P GLQL+G F E L Sbjct: 420 FPAGQSE-GLPFGLQLLGPEFSEHKL 444 >gi|309362403|emb|CAP28226.2| hypothetical protein CBG_08395 [Caenorhabditis briggsae AF16] Length = 447 Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 161/437 (36%), Positives = 240/437 (54%), Gaps = 19/437 (4%) Query: 45 IEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE 104 E+ ++AR A E + L P+ +KDCF T T S +L+ + P Sbjct: 25 FELARRQARDAIE-----------KGLNPFPVAVKDCFLT-STSTTCASQMLENYTPPMN 72 Query: 105 STVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSS 164 +T+ ++ G ++GK N+DEF MG+S+ ++GPV S S D PGGSSGGS+ Sbjct: 73 ATIVDRIVARGGCIIGKTNLDEFCMGTSSALGHFGPVKSALSEAMSDDWLIPGGSSGGSA 132 Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 AV + ++G+DTGGS R PA+F G G KPTYG SR G+I SLD I T + Sbjct: 133 VAVQTGIADLALGSDTGGSTRNPAAFNGVFGFKPTYGVLSRSGLIPLVNSLDSPSIFTTS 192 Query: 225 VRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 L+ +AG D D+T VNLP E +SI+ + VGIP EY + LS K Sbjct: 193 AEACWKYLEMLAGIDAADSTSVNLP----EIQGIRSIEDLKVGIPAEYNNECLSDDAWKL 248 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDI 343 W + L+ A+I+ ISLP T+Y+L Y ++S A+ +SN+ARYD V YG R + Sbjct: 249 WNHAANILERQKAQIIPISLPTTKYSLACYSVLSAADIASNMARYDSVAYGHRSKMDNST 308 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 EMY ++RS V+ RI G Y+L + + + +A K+R I + +AF++ VD+ Sbjct: 309 YEMYASSRSESLNTVVRKRIFAGNYMLMKQYRELYLEKALKVRRKISNEIQDAFKK-VDI 367 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 I+TPT +A P E ++ +D FT A N+AG+PAISVP +P+G+QL Sbjct: 368 IITPTATGTA-PKYSELRDTLFTKEDDDDYFTQAANLAGIPAISVPIGKGCNGLPIGVQL 426 Query: 464 IGQPFREETLFSVGQII 480 + +++TL ++ Q++ Sbjct: 427 MANKLQDKTLCNIAQLL 443 >gi|325092153|gb|EGC45463.1| glutamyl-tRNA amidotransferase subunit A [Ajellomyces capsulatus H88] Length = 512 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 181/480 (37%), Positives = 260/480 (54%), Gaps = 72/480 (15%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + IKD T+ + T S ILD + + +TV + L +GA++ GK N+DEF MG Sbjct: 40 LDGKLVAIKDNICTRDMPTTCASRILDTYTSPFNATVVESLEKSGAIIAGKTNLDEFGMG 99 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + S++GPV + S + +PGGSSGGS+ AVA C A++GTDTGGS+R PA++ Sbjct: 100 SHSMHSHFGPVKNVTES--RREPISPGGSSGGSAVAVATGQCYAALGTDTGGSVRLPAAY 157 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TGTVG KP+YG SR G++++A SLD G++ ++ + K I D D T NLP Sbjct: 158 TGTVGFKPSYGHVSRWGVVAYANSLDTVGVLGSSISTIREVYKTINHPDLHDPT--NLP- 214 Query: 251 PDYERALDQSIQG-----------MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 P L ++ + +GIP EY + LSPTI WQ+ I L+ G I Sbjct: 215 PATRTRLAAAVHNSSTTRSSPSPYLRIGIPTEYNIHELSPTIRTAWQRSIIHLQQMGHTI 274 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE----MYENTRSIG 354 + +SLP T++AL AYY+++PAEASSNLARYDGVRYG R + D +Y +TR G Sbjct: 275 LPVSLPATKHALAAYYVLAPAEASSNLARYDGVRYGTRDTDAPDDAGPGGYLYASTRGKG 334 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF----------------- 397 G EVK RI++G + LS+ D+++L+A+++R L++ DF F Sbjct: 335 LGSEVKRRILLGAFSLSADTIDNYFLQAQRVRRLVQADFERVFRVKNPLLPAADVDADVD 394 Query: 398 --------------EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAG 442 GVDV++ PT PT P E S Y ND+FTV ++AG Sbjct: 395 ADVDGRDKKQIAGDNAGVDVLVVPTAPT--LPPTVESLKRASTVETYMNDIFTVPASLAG 452 Query: 443 LPAISVPAALCEKKM-----------------PLGLQLIGQPFREETLFSVGQIIEKEAG 485 LPA+SVP + M +G+Q+IGQ +E + VG+++E G Sbjct: 453 LPALSVPVQMRSLSMVGDGDESKGDGADVAFGSVGIQVIGQFGDDEMVLHVGEMLEDMHG 512 >gi|17543272|ref|NP_500129.1| hypothetical protein Y41D4A.6 [Caenorhabditis elegans] gi|14574316|gb|AAK68456.1|AC024775_6 Hypothetical protein Y41D4A.6 [Caenorhabditis elegans] Length = 452 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 157/430 (36%), Positives = 241/430 (56%), Gaps = 13/430 (3%) Query: 55 AAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 A +++ + NG L PI +KDCF T G T S +L+ + P +T+ +++ Sbjct: 28 ARQQAKNALKNG----LNPFPIAVKDCFLTNGTSTTCASQMLEKYTPPVNATIVERIVAR 83 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT-PGGSSGGSSAAVAGFLCA 173 G ++GK N+DEF MG+S+ ++GPV S T+ +T PGGSSGGS+ AV + Sbjct: 84 GGCIIGKTNLDEFCMGTSSALGHFGPVKSDLTEPGGTEDWTIPGGSSGGSAVAVQTGIAD 143 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++G+DTGGS R PA+F G G KPTYG SR G+I SLD I +T + LL+ Sbjct: 144 FALGSDTGGSTRNPAAFNGIFGFKPTYGVLSRNGLIPLVNSLDAPSIFAKTAQKCWELLE 203 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 G D+ D+T V LP E+A S++G+ +GIP EY + L+ + W + LK Sbjct: 204 LSKGIDKNDSTSVELP----EKAGISSLEGLKIGIPVEYHNECLTEDAWRHWNRVTGLLK 259 Query: 294 DAG-AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTR 351 G A+I ++LP T+++L Y +I+ A+ +SN+ARYD V YG R EMY ++R Sbjct: 260 SRGAAEIHVLNLPTTRFSLACYSVIAAADVASNMARYDSVAYGHRSSSDSSTYEMYASSR 319 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S V+ RI G Y L + ++ RA K+R +I + +AF + VD+I+TPT Sbjct: 320 SEALNTIVRRRIFAGNYFLMKQYRQKYFERALKVRRIIHDELRQAFRE-VDLIVTPTASG 378 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A P E ++ +D FT A N+AG+P+ISVP + E +P+G+QL+ ++ Sbjct: 379 TA-PKYSELRDTLFSKEDNDDYFTQAANLAGIPSISVPVGVAEDGLPIGVQLMADKLQDR 437 Query: 472 TLFSVGQIIE 481 + V I++ Sbjct: 438 AVCDVAHILD 447 >gi|322695283|gb|EFY87094.1| glutamyl-tRNA amidotransferase, A subunit [Metarhizium acridum CQMa 102] Length = 516 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 176/453 (38%), Positives = 252/453 (55%), Gaps = 52/453 (11%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD AT TQ S IL G++ YE+T+ +L G +++GK NMDEF MGS Sbjct: 73 LAVKDNIATAEFPTQCASRILRGYKSPYEATIVTQLRARGGIVVGKTNMDEFGMGSHTTN 132 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI--GTDTGGSIRQPASFTGT 193 S +G V + STD+ +AVA L A I GTDTGGSIR PAS+TG Sbjct: 133 SMHGAVSNHL----STDEPI-SAGGSSGGSAVAVMLGEADIALGTDTGGSIRLPASYTGA 187 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR---DSAILLKAIAGYDECDATCVNLPV 250 VG +P+YG SR G+ +A SLD G++ R V+ D + K +D D T ++ Sbjct: 188 VGYRPSYGMISRYGVFPYANSLDTVGLLAREVKPILDLLVETKLDEEHDPNDPTSLS--- 244 Query: 251 PDYERALDQS-------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P R ++ + +TVGIP EY + L P + + W + + L+ AG IV +S Sbjct: 245 PASRRRCAKACPPVLEDMPKLTVGIPLEYNVAELDPLMRQAWAEAATALESAGVNIVPVS 304 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQEVKH 361 LP T+ AL AYY+++PAEASSNLA+YDGVRYG R E D +Y TR GFG EV+ Sbjct: 305 LPSTKEALCAYYVLAPAEASSNLAKYDGVRYGARGEHGDARGDTLYSETRGAGFGPEVRR 364 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF------------------------ 397 RI++GTY LSS D+++++A+K+R LI++DF + F Sbjct: 365 RILLGTYSLSSEAMDNYFVQAQKVRRLIRQDFDKVFRRDNPLHEAAQFDLSDMDAETALQ 424 Query: 398 -EQG---VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-L 452 QG VD +L+PT TS P + S+ DVFTV ++AGLPA+SVP+ + Sbjct: 425 DRQGPPQVDFLLSPTA-TSFAPTLNDVLTKSSLEAYMGDVFTVPASLAGLPAVSVPSGRV 483 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 E ++PLGLQLIGQ + ++ + ++ + ++ A Sbjct: 484 GEGRLPLGLQLIGQYWDDKRVLAMAERLKTLAA 516 >gi|167834997|ref|ZP_02461880.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia thailandensis MSMB43] Length = 332 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 207/323 (64%), Gaps = 17/323 (5%) Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A+ GTDTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G + + D A+LL Sbjct: 1 AATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAGSAADCALLLN 60 Query: 234 AIAGYDECDATCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDK 283 A+AG+DE D+T + D+ R L + + G+ +G+P EY L+ + Sbjct: 61 AMAGFDERDSTSLERAGEDFTRRLGEPWAPGNGAGKPLAGLRIGLPDEYFGAGLAADVRA 120 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKD 342 + + GA +V +SLP T+ ++P YY+I+PAEASSNL+R+DGVRYG R E +D Sbjct: 121 AVDAALKAYEALGATLVPVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRD 180 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 +L+MY+ +R+ GFG EV RI++GTYVLS YD++YL+A+KIR +I +DF EAF+ D Sbjct: 181 LLDMYKKSRAEGFGPEVTRRILVGTYVLSHGYYDAYYLQAQKIRRIIAQDFQEAFKS-CD 239 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL---CEKKMPL 459 VI+ P +PT A+ LG + ++ M D++T++V++AGLP +SVP K P+ Sbjct: 240 VIMGPASPTVAWDLGAKGDDPVQM--YLADIYTLSVSLAGLPGMSVPCGFGAGANAKRPV 297 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 GLQ+IG F E + V ++ Sbjct: 298 GLQIIGNYFDEARVLQVADAFQR 320 >gi|224534264|ref|ZP_03674842.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Borrelia spielmanii A14S] gi|224514366|gb|EEF84682.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Borrelia spielmanii A14S] Length = 481 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 170/487 (34%), Positives = 272/487 (55%), Gaps = 15/487 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ ++ + +K +++ +Y E N +N YIE + A+ D Sbjct: 2 DLSNLTLTKIQELVLTKKCKIYDILLAYKNNYE-LNKDINGYIEFF-DDSLEIAKRYDDC 59 Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + N + + L G+ I +KD + + S IL G+ Y++TV ++L + GA+++G Sbjct: 60 LENCELENFPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NMDEFAMGS+ E SYYG ++P ++ GGSSGGS+A VA F S+G+DT Sbjct: 120 RTNMDEFAMGSTCEFSYYGATLNPLNR-----EYVIGGSSGGSAAVVASFQAPFSLGSDT 174 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PAS++G +G KP+YG SR G+ S+A S DQ G ++ D A++LK G DE Sbjct: 175 GGSVRLPASYSGILGFKPSYGGLSRYGLASYASSFDQIGFFAHSIEDIALILKHTCGSDE 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T V++ D+ +S+QG + + KE D + I ++ + L G I Sbjct: 235 MDSTSVDI-FDDFYPLKIESLQGKNLVVIKELSEDLMDKNIATSFSKFKLDLLSKGINIK 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEV 359 E+S+ + L YY ISP EASSNLARY G+ YG R+ E + + Y RS +EV Sbjct: 294 EVSIEEINFILSIYYTISPVEASSNLARYTGLCYGKRMSENLSLNDFYFKHRSNFLSEEV 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 K RI++G Y+LS +Y +A +I + LI F + FE D I+TPT+ F +G Sbjct: 354 KRRIVLGNYLLSEGYDAKYYAKACEILQNLIIPKFNKLFES-CDFIITPTSFVKPFRVGL 412 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ M Y+D+ TV N+ G PAIS+P + ++ + +G+Q+IG+ ++ L S + Sbjct: 413 AFDDPVKM--YYSDICTVIANLIGAPAISLPYSKDKEGLSIGMQIIGRSKKDFELLSFSK 470 Query: 479 IIEKEAG 485 + E G Sbjct: 471 NVIGELG 477 >gi|322712400|gb|EFZ03973.1| glutamyl-tRNA amidotransferase, A subunit [Metarhizium anisopliae ARSEF 23] Length = 465 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 180/454 (39%), Positives = 253/454 (55%), Gaps = 56/454 (12%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD AT TQ S IL G + YE+TV +L G +++GK NMDEF MGS Sbjct: 22 LAVKDNIATAEFPTQCASRILRGHKSPYEATVVTQLRARGGIVVGKTNMDEFGMGSHATN 81 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI--GTDTGGSIRQPASFTGT 193 S +G V + STD+ +AVA L A I GTDTGGSIR PAS+TG Sbjct: 82 SMHGAVSNHL----STDEPI-SAGGSSGGSAVAVMLGEADIALGTDTGGSIRLPASYTGA 136 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL---KAIAGYDECDATCVNLPV 250 VG +P+YG SR G+ +A SLD G++ R V+ LL K +D D T ++ Sbjct: 137 VGYRPSYGMISRYGVFPYANSLDTVGMLAREVKPILHLLVETKLDEEHDPNDPTSLS--- 193 Query: 251 PDYER-------ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P R L + + +TVGIP EY + L P + + W + + L+ AG IV +S Sbjct: 194 PASRRRCAKACPPLLEDMSKLTVGIPLEYNVAELDPIMRQAWAEAATALESAGVNIVPVS 253 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE----GKDILEMYENTRSIGFGQEV 359 LP T+ AL AYY+++PAEASSNLA+YDGVRYG R E G D L Y TR GFG EV Sbjct: 254 LPSTKEALCAYYVLAPAEASSNLAKYDGVRYGARGEHGDAGGDTL--YSETRGAGFGPEV 311 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------------------- 397 + RI++GTY LSS D+++++A+K+R LI++DF + F Sbjct: 312 RRRILLGTYSLSSEAMDNYFVQAQKVRRLIRQDFDKVFKRDNPLQEAAQFDLSDMDAETA 371 Query: 398 ---EQG---VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 +QG VD +L+PT + A P + S+ DVFTV ++AGLPA+SVP+ Sbjct: 372 LQDKQGPPQVDFLLSPTAMSFA-PTLNDVLTKSSLEAYMGDVFTVPASLAGLPAVSVPSG 430 Query: 452 -LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + E ++PLGLQLIGQ + ++ + ++ + ++ A Sbjct: 431 RVGEGRLPLGLQLIGQYWDDKRVLAMAERLKALA 464 >gi|193083963|gb|ACF09638.1| aspartyl-tRNA(Asn) amidotransferase subunit A [uncultured marine crenarchaeote AD1000-56-E4] Length = 482 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 175/485 (36%), Positives = 260/485 (53%), Gaps = 19/485 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S LN++ + +++ + + E ++ I + +++A++ V + A E Sbjct: 5 ISALNYI------NSIKNGEFTVEEFTLKSLERISQVDEKLHAFLRVNDLAIKNAREIDT 58 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K N + G+P+ IKD +G T S +L+ F Y STV KL A+++G Sbjct: 59 KIKSNQNVGKCYGMPVSIKDNICIEGSKTTCASKVLENFIAPYTSTVINKLNSEDAIIIG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEFAMG S E S YGP +PW + PGGSSGGS +V+ C AS+G+DT Sbjct: 119 KTNLDEFAMGLSTEFSAYGPSRNPWNV-----DYVPGGSSGGSGVSVSANECIASLGSDT 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PASF VG+KPTYG SR G+IS+A S++Q G +T+TV DSA LL I+G D Sbjct: 174 GGSIRNPASFCSVVGLKPTYGLVSRYGLISYANSIEQIGPMTKTVEDSAFLLNIISGIDS 233 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T V+ DY +D I G +GI E D LS + I + GA Sbjct: 234 NDNTTVDNKNQDYLNNIDAGINGKKIGIVTEMTNPDGLSTDVLDATNDAIKTFEKLGANC 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE--GKDILEMYENTRSIGFGQ 357 +ISL +YA+ AYY I+ EA SNLARYD +RYG + G + RS FG Sbjct: 294 EQISLEMVRYAVAAYYTITSTEAGSNLARYDNIRYGYEFDSSGFEFNSYISQARS-KFGP 352 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV R+++G +V S+ ++ +A K+++ + + FE+ D +++PT P F G Sbjct: 353 EVIRRMILGGFVPSAGHAGKYFSKALKVKSKLTAEIKHVFEK-FDYLISPTVPIQPFKFG 411 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ N+ S + D TV N+ G+PAISVP + +P+G+Q++ E +L Sbjct: 412 EKINDPVSFMMV--DFNTVTANLTGIPAISVPYKIT-NGLPIGIQIMANHQEEHSLLQAA 468 Query: 478 QIIEK 482 +EK Sbjct: 469 YALEK 473 >gi|283769203|ref|ZP_06342107.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Bulleidia extructa W1219] gi|283104179|gb|EFC05558.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Bulleidia extructa W1219] Length = 463 Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 157/418 (37%), Positives = 241/418 (57%), Gaps = 10/418 (2%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L +PI IKD TKGI+T A S IL+ + P Y +T+ +KL GAV + K +MDE AMG Sbjct: 44 LLSMPIAIKDNVNTKGIYTTAGSRILENYVPIYNATIVEKLNQAGAVTIAKASMDELAMG 103 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +N +S+ GP +PW T + T GGSSGGS+A VA + +IG+DTG S+R+PAS+ Sbjct: 104 GTNLSSFIGPAHNPW----DTSRIT-GGSSGGSAALVAAGIVPMAIGSDTGDSVRKPASY 158 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G +G+KPTYGR SR GII +A SLD G TR ++++A+ L+ ++G DE D T PV Sbjct: 159 CGVIGVKPTYGRISRYGIIPYASSLDHVGYFTRNIQNAALTLEVLSGRDEKDMTSGFEPV 218 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 DY + + IQG + I I+ + + + LK+ GA + I L T A Sbjct: 219 DDYCAYVGKDIQGKKIAILGNVYHHIQDKRINHLFDKIVDGLKEKGAVVEMIELDETLMA 278 Query: 311 --LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 P+Y II+ EA+SN + DG+RYG R EG + E+ NTR+ GFG +++ R +IG+Y Sbjct: 279 AIYPSYMIIANCEATSNHSNLDGIRYGCRQEGDHMEEIMINTRTRGFGTKIRKRFVIGSY 338 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-NSGSMG 427 L + + +A+++R I + +A Q D I+ P+ T A + + +N N S Sbjct: 339 GLQDENQERVFRKAQRVRRQIVDMWKKAL-QDYDAIIAPSAGTIAPKIEEVDNINPLSDA 397 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ ++ + N +G P+++ P + MP+G+ L ++E +F +G IE+ G Sbjct: 398 YLISENYMAIANFSGTPSMTQPMGFVD-GMPVGINLNTDIWQEGVMFQIGAAIEEVTG 454 >gi|240281359|gb|EER44862.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ajellomyces capsulatus H143] Length = 508 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 179/476 (37%), Positives = 258/476 (54%), Gaps = 68/476 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + IKD T+ + T S ILD + + +TV + L +GA++ GK N+DEF MG Sbjct: 40 LDGKLVAIKDNICTRDMPTTCASRILDTYTSPFNATVVESLEKSGAIIAGKTNLDEFGMG 99 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + S++GPV + S + +PGGSSGGS+ AVA C ++GTDTGGS+R PA++ Sbjct: 100 SHSMHSHFGPVKNVTES--RREPISPGGSSGGSAVAVATGQCYVALGTDTGGSVRLPAAY 157 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TGTVG KP+YG SR G++++A SLD G++ ++ + K I D D T NLP Sbjct: 158 TGTVGFKPSYGHVSRWGVVAYANSLDTVGVLGSSISTIREVYKTINHPDLHDPT--NLP- 214 Query: 251 PDYERALDQSIQG-----------MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 P L ++ + +GIP EY + LSPTI WQ+ I L+ G I Sbjct: 215 PATRTRLAAAVHNSSTTRSSPSPYLRIGIPTEYNIHELSPTIRTAWQRSIIHLQQMGHTI 274 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE----MYENTRSIG 354 + +SLP T++AL AYY+++PAEASSNLARYDGVRYG R + D +Y +TR G Sbjct: 275 LPVSLPATKHALAAYYVLAPAEASSNLARYDGVRYGTRDTDAPDDAGPGGYLYASTRGKG 334 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF----------------- 397 G EVK RI++G + LS+ D+++L+A+++R L++ DF F Sbjct: 335 LGSEVKRRILLGAFSLSADTIDNYFLQAQRVRRLVQADFERVFRVKNPLLPAADVDADVD 394 Query: 398 ----------EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAI 446 GVDV++ PT PT P E S Y ND+FTV ++AGLPA+ Sbjct: 395 GRDKKQIAGDNAGVDVLVVPTAPT--LPPTVESLKRASTVETYMNDIFTVPASLAGLPAL 452 Query: 447 SVPAALCEKKM-----------------PLGLQLIGQPFREETLFSVGQIIEKEAG 485 SVP + +G+Q+IGQ +E + VG+++E G Sbjct: 453 SVPVQMRSLSTVGDGDESKGDGADVAFGSVGIQVIGQFGDDEMVLHVGEMLEGMHG 508 >gi|52789205|gb|AAU87541.1| amidase [Comamonas testosteroni] Length = 468 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 169/495 (34%), Positives = 277/495 (55%), Gaps = 39/495 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + +++ +L+++++SAVE++D+ + + ++ Q++AY+ V+ +ARAAA+++D Sbjct: 1 MSSLTRLTLAQVAQKLKAREVSAVEVLDACLTQVRSTEKQISAYVCVLEDQARAAAQQAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G + L G+P+ +KD + G+ T A S + P + V ++L D GAV+L Sbjct: 61 ADISAGRWKGPLHGVPVAVKDLYDIAGVPTTASSRQRTNWTPQQDCAVVRRLKDAGAVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + EFA G VI+P TPGGSSGGS+A VA + GTD Sbjct: 121 GKTHTHEFAYG----------VITPKSRNPWDPGRTPGGSSGGSAATVAACGVYLATGTD 170 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R P+S TVG+KPTYGR SR G+ S + SLD G ITRTV D+A+ L+ +AG+D Sbjct: 171 TGGSVRIPSSMCNTVGLKPTYGRVSRAGVSSLSWSLDHPGPITRTVEDTALSLQVMAGFD 230 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D ++ PVP Y L Q ++G+ VG+PK Y D + P ++ + I LK+ GA++ Sbjct: 231 PADRGSLDEPVPSYAEGLGQGVKGLRVGVPKNYFFDRVDPEVESAVRAAIDQLKELGAEL 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE+ +P + +P + I EAS+ Y R ++ E+Y +V Sbjct: 291 VEVEVPMAEQIIPVEFGIVLPEASA----YH------RTMLRESPELYT--------ADV 332 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + + +G V + + YL+A+++RTL++R E F++ +DV++ PT P A G+E Sbjct: 333 RILLELGNLVTA-----TDYLQAQRVRTLMQRAVAEMFQR-IDVLIAPTLPIPAARSGEE 386 Query: 420 ENN--SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + G++ ++ FT N+ GLP +++P + +P+G+Q+ G+P E+TL Sbjct: 387 VHTWPDGTVEALFMAYTRFTSFGNVTGLPTLNLPCGFSKDGLPIGMQITGRPLDEKTLLR 446 Query: 476 VGQIIEKEAGYFRPH 490 G EK + + H Sbjct: 447 AGLAYEKATTWHQRH 461 >gi|315040459|ref|XP_003169607.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma gypseum CBS 118893] gi|311346297|gb|EFR05500.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma gypseum CBS 118893] Length = 505 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 178/493 (36%), Positives = 275/493 (55%), Gaps = 60/493 (12%) Query: 39 SQMNAYIEVVAQKA------RAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQAC 92 + +NA+I + + A RA + K ++ L G +G+KD T + T Sbjct: 18 ANLNAFITPLERSATWVERLRAVDDRRGKDVV---LAPLNGKLVGVKDNICTSELPTTCG 74 Query: 93 SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD 152 S IL F + +TV + L + GAV+ GK N+DEF MGS + S++G V + + + Sbjct: 75 SAILQNFTSPFNATVVELLENAGAVVAGKTNLDEFGMGSHSTHSHFGSVKN---NCGGEE 131 Query: 153 KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 ++ GGSSGGS+ AVA C A++GTDTGGS+R PA++TG +G KP+YG SR G++++A Sbjct: 132 YYSAGGSSGGSAIAVATGQCHAALGTDTGGSVRLPAAYTGILGFKPSYGLISRWGVVAYA 191 Query: 213 PSLDQAGII---TRTVRDSAILLKAIAGYDECDATCVN----LPVPDYERALDQSIQGMT 265 SLD GI T TVR+ + + YD D T ++ L + + + + Sbjct: 192 NSLDTVGIFAKDTATVRN---VFDVVNRYDSRDPTSISPATRLRILAAGKEPTKRPARLR 248 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSN 325 +G+P EY + LSP I WQ+ + L+ G I ++LP T+ AL AYY+++PAEASSN Sbjct: 249 IGVPLEYNIHELSPDIRSAWQRALHHLQSKGHSIHPVTLPATKQALSAYYVLAPAEASSN 308 Query: 326 LARYDGVRYGLR-VEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 L++YDGVRYG R ++ D +Y NTR G G EV+ RI++GT+ LS+ D+++++A Sbjct: 309 LSKYDGVRYGTRDIKSADNAGDYLYSNTRGKGLGPEVRRRILLGTFSLSADKIDNYFIQA 368 Query: 383 RKIRTLIKRDFTEAFEQ---------------------------GVDVILTPTTPTSAFP 415 +KIR L++ DF F + +DV++ PT P++A P Sbjct: 369 QKIRRLVQSDFNSVFRRRHPLLHTTATSLELRDPIHNSDVEANVKIDVLICPTAPSTA-P 427 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL--CEKKMP-----LGLQLIGQPF 468 KE N+ + NDVFTV ++AGLPA+SVP + + K+P G+Q+IGQ Sbjct: 428 TIKELENASPIEAYTNDVFTVPCSLAGLPALSVPVSFEGEQHKIPSCLRHAGVQVIGQFG 487 Query: 469 REETLFSVGQIIE 481 ++ + VG ++E Sbjct: 488 DDDMVLDVGMMLE 500 >gi|225683099|gb|EEH21383.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paracoccidioides brasiliensis Pb03] Length = 513 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 172/458 (37%), Positives = 259/458 (56%), Gaps = 49/458 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD T+ + T S IL+ + + +TV + L GA++ GK N+DEF MG Sbjct: 53 LDGKLVAVKDNICTRDMPTTCASRILETYTSPFNATVVESLERAGAIVAGKTNLDEFGMG 112 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + S++GPV + + + +PGGSSGGS+ AVA C A++GTDTGGS+R PA++ Sbjct: 113 SHSMHSHFGPVGNVVAA--GKEPISPGGSSGGSAIAVATGQCYAALGTDTGGSVRLPAAY 170 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN--- 247 TGT+G KP+YG SR G++++A SLD G++ + + K I D D T + Sbjct: 171 TGTIGFKPSYGLVSRWGVVAYANSLDTVGVLGSKISTIRNVFKIINHPDFHDPTNLQPST 230 Query: 248 ---LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L ++ + +S + + +GIP EY + LSP + WQQ I++LK+ G I +SL Sbjct: 231 RARLTSAIHKASSLRSYRSIRIGIPTEYNIHELSPVVRTVWQQSIAYLKNQGYAIHPVSL 290 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDIL----EMYENTRSIGFGQEV 359 P T+ AL AYYI++PAEASSNLARYDGVRYG R D +Y NTR GFG EV Sbjct: 291 PTTKQALAAYYILAPAEASSNLARYDGVRYGTRDTNAPDNAGPGGYLYANTRGNGFGSEV 350 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------------------E 398 K RI++G + LS+ ++++LRA+++R L++ DF F + Sbjct: 351 KRRILLGAFSLSADAINNYFLRAQRVRRLVQTDFENVFAFRNPLLPAVDAGALKTTARRK 410 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL------ 452 VDV++ PT PT P K + + DVFTV ++AGLPA+SVP + Sbjct: 411 YAVDVLVVPTAPTLP-PTIKLLKRATPVEIYMKDVFTVPASLAGLPALSVPVQIHRFNNF 469 Query: 453 --------CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ G+Q+IGQ +E + ++G+I+E+ Sbjct: 470 YDGVSGEVGDEIRSAGIQVIGQFGDDEFVLNIGEILER 507 >gi|187918212|ref|YP_001883775.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Borrelia hermsii DAH] gi|119861060|gb|AAX16855.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Borrelia hermsii DAH] Length = 477 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 176/484 (36%), Positives = 273/484 (56%), Gaps = 21/484 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ + R+ + ++ ++V Y + E +N +N YIE A A+E D+ + G Sbjct: 6 LSLIKIRELILTRKCKIYDIVLFYKELYE-ANKDINGYIEFF-DDALELAKEYDELLSRG 63 Query: 67 DARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +DL G+PI +KD + K S +L G+ Y++TV ++L DNGA+++G+ NM Sbjct: 64 EGQDLPLIGMPIAVKDNISVKNKGLTCASELLQGYISPYDATVIKRLKDNGAILIGRTNM 123 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E SYYG ++P ++ GGSSGGS A VA ++G+DTGGS+ Sbjct: 124 DEFAMGSSCEFSYYGVTLNPLNK-----EYVVGGSSGGSGAVVADNQAPFALGSDTGGSV 178 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF+G +G KP+YG SR G+ S+A SLDQ G ++ D A++LK G D+ DAT Sbjct: 179 RLPASFSGLIGFKPSYGGLSRYGLASYASSLDQIGFFANSIDDVALILKYTCGIDKMDAT 238 Query: 245 CVNL---PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +++ P P L + G + + KE D + P I + + + S L + G +I E Sbjct: 239 SIDIIQEPYP----LLSNPLAGTKLAVIKELSEDLMEPEIAREFSKFKSGLLNRGVEIHE 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVK 360 +S+ L YY +SP EA+SNLARY + YG R+ + L + Y RS+ +EVK Sbjct: 295 VSIEVVNCILSLYYSVSPVEAASNLARYTCLHYGKRLNDELSLNDFYYKHRSLFLKEEVK 354 Query: 361 HRIMIGTYVLSSRCYDSHYLRARK-IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 RI++G Y+LS +Y +A K I ++ F+E F I+TPT+ F +G Sbjct: 355 RRIVLGNYLLSEGYDLQYYAKACKIIENVLVPKFSEIF-NNCSYIITPTSFVKPFKIG-- 411 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 EN M Y+D+ TV N+ G PA+S+P A + +P+G+Q+IGQ R+ L + + Sbjct: 412 ENFDDPMKMYYSDLCTVIANLVGAPALSIPFAQDYRGLPIGMQIIGQVKRDFELLNFAKN 471 Query: 480 IEKE 483 + +E Sbjct: 472 VIEE 475 >gi|149046935|gb|EDL99683.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Rattus norvegicus] Length = 384 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 156/377 (41%), Positives = 222/377 (58%), Gaps = 16/377 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E L+ I+ EL + I+ + +NAYI V + A AEES+KR G + Sbjct: 6 LREVSSALKQGHITPTELCKKCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQS 64 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 DL+GIP+ +KD F+T GI T S++L G+ P Y +TV Q+L D GA+++GK N+DEF Sbjct: 65 LGDLDGIPVAVKDNFSTSGIETTCASNMLKGYLPPYNATVVQRLLDQGALLMGKTNLDEF 124 Query: 128 AMGSSNETSYYGPVISPWR------------SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 AMGS + +GPV +PW + + + GGSSGGS+AAVA F C A+ Sbjct: 125 AMGSGSTDGVFGPVKNPWTYSKQYRERSRQDAQEDSHWLITGGSSGGSAAAVAAFTCFAA 184 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G+DTGGS R PA+ GTVG KP+YG SR G+I S+D GI TR V D+AI+L + Sbjct: 185 LGSDTGGSTRNPAAHCGTVGFKPSYGLVSRHGLIPLVNSMDVPGIFTRCVDDTAIVLGVL 244 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG+D D+T VN PV + G+ +GIPKEY + LS I W Q + Sbjct: 245 AGHDPKDSTTVNDPVKPTTLPSVPDVSGLCIGIPKEYLVPELSSEIRSLWSQAADLFEAE 304 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSI 353 GA+++E+ LPHT Y++ Y+++ +E +SN+AR+DG++YG R V+ +Y TR Sbjct: 305 GARVIEVCLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHRSAVDMSSTEALYAATRQE 364 Query: 354 GFGQEVKHRIMIGTYVL 370 GF VK RI+ G + L Sbjct: 365 GFNDVVKGRILSGNFFL 381 >gi|310643137|ref|YP_003947895.1| glutamyl-tRNA(gln) amidotransferase subunit a [Paenibacillus polymyxa SC2] gi|309248087|gb|ADO57654.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus polymyxa SC2] Length = 462 Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 168/490 (34%), Positives = 270/490 (55%), Gaps = 37/490 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L+F A+ E + +R++ IS VE+ + + IE N ++N ++ ++ A A++S++ Sbjct: 6 SQLSFAAIHELAEGIRTRKISPVEITEHALHRIERLNPKLNVFVTQTSELAIEQAKQSER 65 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I++G + L GI I KD + TKGI T A S IL+ F P Y+STV KL + G V+LG Sbjct: 66 DIMHGRYKGPLHGISIVHKDLYYTKGIRTTAGSKILNNFVPDYDSTVAAKLHEAGTVLLG 125 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K+ EFA G + + ++GP ++PW + + GGSSGGS++A+A L G+DT Sbjct: 126 KVQTHEFAAGLTTTSPHFGPCLNPWNT-----ELVTGGSSGGSASALAAGLTYLGTGSDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G VG+KPTYGR SR GII A SLD G +TR V D+++ L ++G+D Sbjct: 181 GGSIRIPAALCGVVGMKPTYGRVSRYGIIPMAWSLDHPGPLTRCVMDASLCLDVMSGFDP 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D + V+LP P + ++G+ +G+P Y + L P ++ + I+ ++ GA+I+ Sbjct: 241 KDESTVDLPAPGI-KMYPNGLRGVRIGLPTSYYYEDLMPEVEAAMKAAINKFRELGAEII 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLP ++ A I E S ++ + L G D+ E++R I Sbjct: 300 EVSLPLIKHVRSATMAIMMTEMYSYHEKW--LETELEQYGPDVRMFLESSRDIP------ 351 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 S YL++++ R LI DF A G+D++LTP TP +A Sbjct: 352 ---------------ASIYLQSQRARQLIVNDFLNAL-SGIDILLTPATPITA----PRA 391 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ S+ + + FT+ N+ GLP++S+P +P+ +QLIG+PF E T+ +G Sbjct: 392 DDDASVFRL--NSFTLPTNLTGLPSLSMPCGFSPSGLPINMQLIGRPFEEATVLGIGNTY 449 Query: 481 EKEAGYFRPH 490 E + + H Sbjct: 450 EMNTDWHKRH 459 >gi|319937200|ref|ZP_08011607.1| glutamyl-tRNAGln amidotransferase [Coprobacillus sp. 29_1] gi|319807566|gb|EFW04159.1| glutamyl-tRNAGln amidotransferase [Coprobacillus sp. 29_1] Length = 480 Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 162/480 (33%), Positives = 268/480 (55%), Gaps = 15/480 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E S ++ A D + I+ +++NA++ + KA E++D + + Sbjct: 5 SIEELHHLFSSGELDAKAYYDELFKEIDIQQNRLNAFVTITKTKAYQDLEQADFKEL--- 61 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP +KD + TKGI T A S +L+ + P Y + V L G ++GK +MDE Sbjct: 62 ---LSGIPYVLKDNYNTKGIQTTASSRMLENYVPIYNAHVVDLLSQEGVCLVGKASMDEL 118 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG +N+++ GPV +PW S GGSSGGS+A V + ++G+DTG SIR+P Sbjct: 119 AMGGTNKSALTGPVYNPWDS-----SRIAGGSSGGSAALVGSGVVPFALGSDTGDSIRKP 173 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A F G VG KPT+GR SR G+I +A SLD G TR VRD AI+++A+AG D+ D T Sbjct: 174 AGFCGIVGFKPTWGRISRYGVIPYASSLDTVGAFTRNVRDMAIVIEALAGRDDRDMTSSQ 233 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-- 305 VP Y + L I+GM + + K + + I +++ I KD GA + E+++P Sbjct: 234 KEVPCYIKNLTDDIRGMKIAVLKSVSDEIRNVEIKTNFEKVIQTYKDLGAIVEEVTMPVE 293 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + LP Y IIS +EA+SN + DG++YG R +G+ ++ N+R+ GFG +K R ++ Sbjct: 294 LMRTLLPTYTIISNSEATSNHSCLDGIKYGNRQDGESTDDIMINSRTHGFGDHIKRRFIL 353 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G L++ + + +A+++R LI + + + D+ILTP + A + + ++ S Sbjct: 354 GNLALATENQERMFRKAQRVRRLIVAELNKIY-NNYDIILTPNGGSVAPKVDEATDDRLS 412 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ + N AGLP++S+P+ + MP+ + ++G+ F E+T+F+ +E G Sbjct: 413 DEYLILENHLSLGNFAGLPSLSLPSGFVD-HMPIAINVMGRVFEEQTVFNCAYALENALG 471 >gi|118575442|ref|YP_875185.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Cenarchaeum symbiosum A] gi|254790385|sp|A0RU64|GATA_CENSY RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|118193963|gb|ABK76881.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Cenarchaeum symbiosum A] Length = 479 Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 182/443 (41%), Positives = 262/443 (59%), Gaps = 24/443 (5%) Query: 33 AIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPIGIKDCFATKGIHT 89 AIE + Q ++AYI + +KA A D RI G+ R L G PI +KD +G+ T Sbjct: 27 AIERTKKQGLDAYI-TLNEKALDEARRIDSRIKKGEKVGRCL-GAPIAVKDNICVRGMRT 84 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S +L+G+ Y++TV +L A++ GK NMDEFAMG + E S YGP +PW Sbjct: 85 TCASKMLEGYESPYDATVVTRLLAEDAIITGKTNMDEFAMGLTTEFSAYGPSRNPWNK-- 142 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + TPGGSSGGS+AAV G C AS+G+DTGGS+R PASF G VG KPTYG SR G++ Sbjct: 143 ---ECTPGGSSGGSAAAVGGLECIASLGSDTGGSVRNPASFCGMVGFKPTYGLVSRYGLV 199 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 S+A S++Q G ITRTV D+A ++ I+G D DAT + + +D I+G VG+ Sbjct: 200 SYANSIEQIGPITRTVEDAAFMMDVISGADPNDATTIECK-GGFLDGIDAGIKGKKVGLI 258 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 E + + P + + + ++ L+DAGA+ ++SL +Y++ AYY I+ EA+SNLARY Sbjct: 259 TEMAGEGIDPRVAEATRDAMAALEDAGARCGKVSLDMVKYSVAAYYTITATEAASNLARY 318 Query: 330 DGVRYGLRVEGKDILEMYENTRSIG-----FGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 D YG + +E YE I FG EV R+++G +V SS +Y RA K Sbjct: 319 DNTMYGYDMP----IESYEFHSYISKARRKFGPEVTRRMILGGFVSSSGHGGRYYHRALK 374 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 +R L+ R+ EA + D++L+PT P F LG++ + +G D TV N+ G P Sbjct: 375 VRGLLAREAEEALAE-YDLLLSPTVPILPFKLGEKMGD--PVGLFLVDYNTVTANLTGKP 431 Query: 445 AISVPAALCEKKMPLGLQLIGQP 467 A SVP +C+ +P+G+QL+G+P Sbjct: 432 AASVPYTVCD-GLPVGMQLMGRP 453 >gi|119474593|ref|XP_001259172.1| glutamyl-tRNA amidotransferase, A subunit, putative [Neosartorya fischeri NRRL 181] gi|119407325|gb|EAW17275.1| glutamyl-tRNA amidotransferase, A subunit, putative [Neosartorya fischeri NRRL 181] Length = 485 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 172/484 (35%), Positives = 271/484 (55%), Gaps = 53/484 (10%) Query: 35 ENSNSQMNAYIEVVAQKA--RAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQA 91 + S++ +NA+I V R +++ R +G ++ +++G I KD T+ T Sbjct: 14 QRSHAALNAFITTVQHSGPWREQVRDAEVRRESGKSKSEVDGRLIAFKDNICTRDFPTTC 73 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL F + +TV ++L + GA++ GK N+DEF MGS + S++GPV + R Sbjct: 74 ASGILAKFASPFNATVVEQLSEAGAIVAGKTNLDEFGMGSHSLNSWFGPVKN-QRQYQEG 132 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + GGSSGGS+ +VA C A++GTDTGGS+R PA++TGTVG KP+YG SR G++++ Sbjct: 133 RILSAGGSSGGSAVSVATDQCYAALGTDTGGSVRLPAAYTGTVGFKPSYGLVSRWGVVAY 192 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 A SLD GI+ + + D +L P L + + +G+P E Sbjct: 193 ANSLDTVGILAKNASTAR------------DVFPSHLQQPAL---LSRMTSSLRIGVPIE 237 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 Y + LSP++ + W I++L++ G I +SLP T+ AL AYY+++PAEASSNLA+YDG Sbjct: 238 YNISELSPSVRRAWALSIAFLREQGHTIHPVSLPTTKLALSAYYVLAPAEASSNLAKYDG 297 Query: 332 VRYGLRVEGKDI-----LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 +RYG R +G D +Y TR GFG EVK RI++G + LS+ ++++++A+++R Sbjct: 298 IRYGSRCDGPDSGGQPDSYLYAKTRGDGFGPEVKRRILLGAFSLSADAINNYFIQAQRVR 357 Query: 387 TLIKRDFTEAF--------------------EQGVDVILTPTTPTSAFPLG---KEENNS 423 L++RDF F + VDV++ PT P+ L + ++ Sbjct: 358 RLVQRDFNAVFRAEQPMAPSRLKGDAELKSKQAEVDVLICPTAPSCPPQLADLVETDSIF 417 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMP-----LGLQLIGQPFREETLFSVG 477 S+ NDVFTV ++AGLPA SVP ++ C + G+Q+IGQ +E + V Sbjct: 418 SSLNAYTNDVFTVPASLAGLPAASVPVSVDCWDEGSSDADLAGIQIIGQYGDDELVLKVS 477 Query: 478 QIIE 481 +I+E Sbjct: 478 EILE 481 >gi|15640004|ref|NP_219457.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Treponema pallidum subsp. pallidum str. Nichols] gi|189026243|ref|YP_001934015.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Treponema pallidum subsp. pallidum SS14] gi|6225419|sp|O83983|GATA_TREPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|229464477|sp|B2S4Q7|GATA_TREPS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|3323347|gb|AAC65970.1| glu-tRNA amidotransferase, subunit A (gatA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018818|gb|ACD71436.1| glu-tRNA amidotransferase, subunit A [Treponema pallidum subsp. pallidum SS14] gi|291060378|gb|ADD73113.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema pallidum subsp. pallidum str. Chicago] Length = 506 Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 170/497 (34%), Positives = 270/497 (54%), Gaps = 36/497 (7%) Query: 13 RDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEV---------VAQKARAAAEESD 60 + +L + IS++++V ++ E S S + A +E A RA+ +S Sbjct: 15 KAQLEAGAISSLQIVRAFRNVYEEDTRSASPLGALVEFFSDAEEHARTADNLRASCAQST 74 Query: 61 KRI-ING---DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 K NG + L G+P +KD + KG H S +L +R Y++TV +L GA Sbjct: 75 KTAGANGGSVSGKPLLGLPFAVKDNISVKGKHCTCGSKLLADYRAPYDATVVARLRAAGA 134 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 + LG+ NMDEFAMGSS E S YGP +P R T + GGS+ + A F ++ Sbjct: 135 IPLGRTNMDEFAMGSSTEYSVYGPTRNP-RDRSRTSGGSSGGSAAAVAGGQAPF----AL 189 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+TGGS+R PA++ G G+KPTYG SR G+++F SLDQ G + D A+ L + Sbjct: 190 GTETGGSVRLPAAYCGLYGLKPTYGLLSRYGVVAFGSSLDQIGFFATCIDDIALALSVTS 249 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMT--------VGIPKEYRLDY--LSPTIDKTWQ 286 G D D+T P A+ + + +P+E +D + P + +Q Sbjct: 250 GKDLYDSTSTCPPPATGRHAVSHHLAPFSAHECSILRAAVPREL-VDAPGVHPDVSAQFQ 308 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE- 345 + ++WL+ ++ E++LP Q A+P YY+++ AEA+SNLAR+DG+RYG R + +LE Sbjct: 309 RFLTWLRAQNVQVEEVTLPALQAAVPVYYLVATAEAASNLARFDGIRYGQRGDTDALLEN 368 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 Y R+ GFG EV+ RI++G YVLS +Y + ++R+ I+++ T+ I+ Sbjct: 369 YYRAVRTSGFGPEVQRRIIVGNYVLSRHFSGDYYRTSVRVRSRIEQECTQLL-CSYHFIV 427 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 PT T AFPLG+ ++ +M +D+FT VN+A LPA+SVP +P+G+Q+IG Sbjct: 428 CPTAATGAFPLGERIHDPLAM--YCSDLFTTFVNLARLPALSVPVGTSGTGLPIGIQIIG 485 Query: 466 QPFREETLFSVGQIIEK 482 ++E + + + E+ Sbjct: 486 SQWQECAVLRLAKRWEE 502 >gi|119953137|ref|YP_945346.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Borrelia turicatae 91E135] gi|119861908|gb|AAX17676.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Borrelia turicatae 91E135] Length = 481 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 167/460 (36%), Positives = 265/460 (57%), Gaps = 14/460 (3%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCFATKGI 87 + + + +N +N YIE + A++ D+ + G+ ++L G+PI +KD + K Sbjct: 28 FYKELYEANKDINGYIEFF-DDSLELAKKYDELLGKGEGQNLPLIGMPIAVKDNISIKNK 86 Query: 88 HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS 147 S +L G+ Y++TV ++L D+GA+M+G+ NMDEFAMGSS E SYYG ++P Sbjct: 87 ALTCASELLQGYVSPYDATVIKRLKDSGAIMIGRTNMDEFAMGSSCEFSYYGVTLNPLNK 146 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 ++ GGSSGGS A VA ++G+DTGGS+R PASF+ +G KP+YG SR G Sbjct: 147 -----EYVVGGSSGGSGAVVAANQAPFALGSDTGGSVRLPASFSSLIGFKPSYGGLSRYG 201 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVG 267 + S+A SLDQ G ++ D A++LK G D+ DAT ++L + D L +S+ G + Sbjct: 202 LASYASSLDQIGFFANSIDDVALILKYTCGIDKMDATSIDL-IQDPYPLLSKSLAGTKLA 260 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 + KE D + P + + + S L + G +I E+S+ + L YY +SP EA+SNLA Sbjct: 261 VIKELSEDLMEPEVACEFSKFKSALLNRGVEIHEVSIEAVNFVLSLYYSLSPVEAASNLA 320 Query: 328 RYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI- 385 RY + YG R+ + ++ + Y RS+ +EVK RI++G Y+LS +Y++A KI Sbjct: 321 RYTCLHYGKRLNDELNLNDFYYRHRSLFLREEVKRRIVLGNYLLSEGYDLQYYVKACKIV 380 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 ++ F E F I+TPT+ F +G EN + Y+D+ TV N+ G PA Sbjct: 381 ENVLIPKFNEIF-NNYSYIITPTSFVKPFKIG--ENFDNPIKMYYSDMCTVIANLIGAPA 437 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +S+P + ++ +P+G+Q+IGQ R+ L S + + +E G Sbjct: 438 LSIPFSQDDRGLPIGMQIIGQVKRDFDLLSFAKNVIEELG 477 >gi|206895209|ref|YP_002246497.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Coprothermobacter proteolyticus DSM 5265] gi|206737826|gb|ACI16904.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Coprothermobacter proteolyticus DSM 5265] Length = 464 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 173/469 (36%), Positives = 279/469 (59%), Gaps = 24/469 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNA--YIEVVAQKARAAAEESDKRII 64 M + E + ++ +I+ L+ I+ +E + +++A Y++ ++ R A EE+DK Sbjct: 1 MNIKEVFTKRQNGEITFKGLMQKTIEKLEQ-DKELHAFLYLKHPSELIREA-EEADKAWE 58 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L+GIP+ +KD + S +L F Y++TV +KL ++GA+++GK N+ Sbjct: 59 KGVRRPLQGIPVAVKDNICVSSMPCTCASKVLQDFVAPYDATVVKKLKESGAIIVGKTNL 118 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS+E S +GP +P +D + ++ A +C ++G+DTGGS+ Sbjct: 119 DEFAMGSSSENSAFGPTKNP---LDLSRSPGGSSGGSAAAVAAD--MCMVALGSDTGGSV 173 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPA+FTG +G KP+YG SR G+++FA SLDQ GI+ +T D + + G D D+T Sbjct: 174 RQPAAFTGIIGFKPSYGAISRYGLVAFASSLDQIGILAKTPEDVLLTSFVLFGKDHLDST 233 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEIS 303 ++ + D+ ++ + +G+ KE + + P + + ++ + L KD +VE+S Sbjct: 234 TTDVFM-DFS---PKASEVRRIGLVKEIDISAVDPQVKEGYELFVKQLSKD--FDVVEVS 287 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 +PH + AL AYY I+PAEASSNLARYDGVRYG VE + + TR++ G+EVK RI Sbjct: 288 IPHWEEALAAYYFIAPAEASSNLARYDGVRYGTMVEEETYWDTVRETRNL-LGEEVKRRI 346 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++G++ LS+ D+ Y +A +R + +F +AF + VD +LTPTTPT F LG+ ++ Sbjct: 347 LLGSFALSAGFKDALYEKANYLRRWLVLEFAQAF-KDVDFLLTPTTPTLPFKLGEVKDPL 405 Query: 424 GSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +Y D+FT N+A LPA+SVP + +P+GLQ I PF ++ Sbjct: 406 ----QLYKADLFTTPANLAYLPAVSVPFKATGEPLPVGLQFIA-PFGQD 449 >gi|226288435|gb|EEH43947.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paracoccidioides brasiliensis Pb18] Length = 507 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 170/456 (37%), Positives = 260/456 (57%), Gaps = 51/456 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD T+ + T S IL+ + + +TV + L GA++ GK N+DEF MG Sbjct: 53 LDGKLVAVKDNICTRDMPTTCASRILETYTSPFNATVVESLERAGAIVAGKTNLDEFGMG 112 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + S++GPV + + + +PGGSSGGS+ AVA C A++GTDTGGS+R PA++ Sbjct: 113 SHSMHSHFGPVGNVVAA--GKEPISPGGSSGGSAIAVATGQCYAALGTDTGGSVRLPAAY 170 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVN 247 TGT+G KP+YG SR G++++A SLD G++ + + + +D + +T Sbjct: 171 TGTIGFKPSYGLVSRWGVVAYANSLDTVGVLGSKI---STIRNVFNFHDPTNLQPSTRAR 227 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 L ++ + +S + + +GIP EY + LSP + WQQ I++LK+ G I +SLP T Sbjct: 228 LTSAIHKASSLRSYRSIRIGIPTEYNIHELSPVVRTVWQQSIAYLKNQGYAIHPVSLPTT 287 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDIL----EMYENTRSIGFGQEVKHR 362 + AL AYYI++PAEASSNLARYDGVRYG R D +Y NTR GFG EVK R Sbjct: 288 KQALAAYYILAPAEASSNLARYDGVRYGTRDTNAPDNAGPGGYLYANTRGNGFGSEVKRR 347 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------------------EQGV 401 I++G + LS+ ++++LRA+++R L++ DF F + V Sbjct: 348 ILLGAFSLSADAINNYFLRAQRVRRLVQTDFENVFAFRNPLLPAVDAGALKTTARRKYAV 407 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAAL-------- 452 DV++ PT PT P + + IY DVFTV ++AGLPA+SVP + Sbjct: 408 DVLVVPTAPT--LPPTIKLLKRATPVEIYMKDVFTVPASLAGLPALSVPVQIHRFNNFYD 465 Query: 453 ------CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ G+Q+IGQ +E + ++G+I+E+ Sbjct: 466 GVSGEVGDEIRSAGIQVIGQFGDDEFVLNIGEILER 501 >gi|308463751|ref|XP_003094147.1| hypothetical protein CRE_13710 [Caenorhabditis remanei] gi|308248138|gb|EFO92090.1| hypothetical protein CRE_13710 [Caenorhabditis remanei] Length = 456 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 156/412 (37%), Positives = 229/412 (55%), Gaps = 9/412 (2%) Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KDCF T +T S +L+ + +T+ +++ NG ++GK N+DEF MG+S+ Sbjct: 44 PVAVKDCFLTNTANTTCASQMLENYCAPVNATIVERIVANGGCIIGKTNLDEFCMGTSSA 103 Query: 135 TSYYGPVISPWRSMDSTDKFT-PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ++GPV S + DS D + PGGSSGGS+ AV + ++G+DTGGS R PA+F G Sbjct: 104 LGHFGPVKSAVKEEDSPDDWIIPGGSSGGSAVAVQAGIVDLALGSDTGGSTRNPAAFNGI 163 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP 251 G+KPTYG SR G+I SLD I+ + L+ + G D D+T V LP Sbjct: 164 YGLKPTYGVLSRYGLIPLVNSLDSPSILATSAEKCWKYLEIMTSKGIDAADSTSVTLPEE 223 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 E + S++G+ VGIP EY + LS + W + + LK GA + ISLP T+Y+L Sbjct: 224 SKESSRISSLKGLKVGIPIEYHNECLSEDAWRHWNRIVGILKREGAIVRVISLPTTKYSL 283 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 Y +I+ A+ +SN+ARYD V YG R E + EMY +RS V+ RI G Y L Sbjct: 284 ACYSVIAAADVASNMARYDSVAYGHRSEKNESTYEMYATSRSESLNTVVRRRIFAGNYFL 343 Query: 371 SSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + Y YL +A K+R LI + AF + VD+++TPT T P + ++ Sbjct: 344 MKQ-YRKLYLDKALKVRRLITDEMLAAFNE-VDILVTPTA-TGPAPKYSQLRDTLFSKED 400 Query: 430 YNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQII 480 +D FT A N+ G+PAIS+P E +P+G+QL+ + L V QI+ Sbjct: 401 DDDYFTQAANLVGIPAISIPVGRSDEDGLPIGVQLMANRLNDRALCDVAQIL 452 >gi|315187303|gb|EFU21059.1| Amidase [Spirochaeta thermophila DSM 6578] Length = 453 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 163/452 (36%), Positives = 256/452 (56%), Gaps = 29/452 (6%) Query: 28 DSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGI 87 ++Y+ + N ++ A++ + A + +A + +GD L G+P G+KD A +G Sbjct: 11 ETYLSKLRERNEEIGAFLSLDAARGKA--------LSSGDGV-LRGLPFGVKDNIAVEGF 61 Query: 88 HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS 147 S +L Y +T +L + GAV++GK N+DEF MGSS + S G +PW Sbjct: 62 PLTCASRMLQDLVSPYTATAVSRLLEQGAVVVGKTNLDEFGMGSSCDMSALGRTNNPWDL 121 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + SSGGS+AAV+ + ++G+DTGGS+RQPA+F G G+KPTYG SR G Sbjct: 122 SRAAGG-----SSGGSAAAVSAGMVPFALGSDTGGSVRQPAAFCGVYGLKPTYGVVSRFG 176 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVG 267 ++++A SL+ G + + + + + G DE D + ++ P+ + + I +T Sbjct: 177 LVAYASSLEVIGAVAMDLDLLETVFEVMRGEDERDHSSLD---PEEDDCEVRRIAVLTGD 233 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 + L + + +++ LKD G ++VE+ LP +YA+PAYY I+ AEAS+NLA Sbjct: 234 LG-------LEAPVARAYERAQEVLKDLGFQLVEVVLPELEYAVPAYYTIATAEASANLA 286 Query: 328 RYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 RY G+RYG R + ++ E+ RS GFG EVK RI++GT+VL S D +Y +A+++R Sbjct: 287 RYTGIRYGHRPMWSENPQELMRKARSEGFGPEVKLRILLGTFVLRSGFQDRYYHKAQRVR 346 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 TLI+R + F DV+L P PT FP G E S D FT N+AG+PA+ Sbjct: 347 TLIRRSLEQVFSSA-DVLLMPVFPTLPFPHG--EGGLSSFQQKMADRFTTTANLAGVPAL 403 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +VP E+ +P+G+Q++ PF E+ LF V + Sbjct: 404 AVPVGR-EEGLPVGVQVMAPPFGEQRLFQVAR 434 >gi|310772405|dbj|BAJ23969.1| amidase [uncultured bacterium] Length = 468 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 169/496 (34%), Positives = 276/496 (55%), Gaps = 41/496 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + +++ +L+++++SAVE++D+ + + ++ Q++AY+ V+ +ARAAA+++D Sbjct: 1 MSSLTRLTLAQVAQKLKAREVSAVEVLDACLTQVRSTEKQISAYVCVLEDQARAAAQQAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G + L G+P+ +KD + G+ T A S + P + V ++L D GAV+L Sbjct: 61 ADISAGRWKGPLHGVPVAVKDLYDIAGVPTTASSRQRTNWTPQQDCAVVRRLQDAGAVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + EFA G+ S +PW TPGGSSGGS+A VA + GTD Sbjct: 121 GKTHTHEFAYGAITPKSR-----NPW-----DPGRTPGGSSGGSAATVAACGVYLATGTD 170 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+R P+S TVG+KPTYGR SR G+ S + SLD G ITRTV D+A+ L+ +AG+D Sbjct: 171 TAGSVRIPSSMCNTVGLKPTYGRVSRAGVSSLSWSLDHPGPITRTVEDTALSLQVMAGFD 230 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D ++ PVP Y L Q ++G+ VG+PK Y D + P ++ + I LK+ GA++ Sbjct: 231 PADRGSLDEPVPSYAEGLGQGVKGLRVGVPKNYFFDRVDPEVESAVRAAIDQLKELGAEL 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE+ +P + +P + I EAS+ Y R ++ E+Y +V Sbjct: 291 VEVEVPMAEQIIPVEFGIMLPEASA----YH------RTMLRESPELYT--------ADV 332 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + + +G V + + YL+A+++RTL++R E +++ +DV++ PT P A G E Sbjct: 333 RILLELGNLVTA-----TDYLQAQRVRTLMQRAVAEMYQR-IDVLIAPTLPIPAARSG-E 385 Query: 420 ENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E ++ G + V FT N+ GLP +++P + +P+G+Q+ G+P E+TL Sbjct: 386 EVHTWPDGTVEALVMAYTRFTSFGNVTGLPTLNLPCGFSKDGLPIGMQISGRPLDEKTLL 445 Query: 475 SVGQIIEKEAGYFRPH 490 G EK + + H Sbjct: 446 RAGLAYEKATTWHQRH 461 >gi|307719888|ref|YP_003875420.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Spirochaeta thermophila DSM 6192] gi|306533613|gb|ADN03147.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Spirochaeta thermophila DSM 6192] Length = 458 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 163/452 (36%), Positives = 256/452 (56%), Gaps = 29/452 (6%) Query: 28 DSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGI 87 ++Y+ ++ N ++ A++ + A + +A + +GD L G+ G+KD A +G Sbjct: 16 ETYLSKLKERNGEIGAFLSLDAARGKA--------LSSGDGV-LRGLSFGVKDNIAVEGF 66 Query: 88 HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS 147 S IL Y +T ++L + GAV++GK N+DEF MGSS + S G +PW Sbjct: 67 PLTCASRILQDLVSPYTATAVRRLLEQGAVVVGKTNLDEFGMGSSCDMSALGRTNNPWDL 126 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 SSGGS+AAV+ + ++G+DTGGS+RQPA+F G G+KPTYG SR G Sbjct: 127 SRVAGG-----SSGGSAAAVSAGMVPFALGSDTGGSVRQPAAFCGVYGLKPTYGVVSRFG 181 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVG 267 ++++A SL+ G + + + + + G DE D + ++ P+ + + I +T Sbjct: 182 LVAYASSLEVIGAVAMDLDLLETVFEVMRGEDERDHSSLD---PEEDECEVRRIAVLTGE 238 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 + L + + +++ LKD G ++VE+ LP +YA+PAYY I+ AEAS+NLA Sbjct: 239 LG-------LEAPVARAYERAQEALKDLGFQLVEVGLPELEYAVPAYYTIATAEASANLA 291 Query: 328 RYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 RY G+RYG R + ++ E+ RS GFG EVK RI++GT+VL S D +Y +A+++R Sbjct: 292 RYTGIRYGHRPMWSENPQELMRKARSEGFGPEVKLRILLGTFVLRSGFQDRYYHKAQRVR 351 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 TLI+R + F DV+L P PT FP G E S D FT N+AG+PA+ Sbjct: 352 TLIRRSLEQVFSSA-DVLLMPVFPTLPFPHG--EGGLSSFQQKMADRFTTTANLAGVPAL 408 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +VP E+ +P+G+Q++ PF E+ LF V + Sbjct: 409 AVPVGR-EEGLPVGVQVMAPPFGEQRLFQVAR 439 >gi|163855724|ref|YP_001630022.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bordetella petrii DSM 12804] gi|163259452|emb|CAP41752.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bordetella petrii] Length = 468 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 169/496 (34%), Positives = 276/496 (55%), Gaps = 41/496 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + +++ +L+++++SAVE++D+ + + ++ Q++AY+ V+ +ARAAA+++D Sbjct: 1 MSSLTRLTLAQVAQKLKAREVSAVEVLDACLTQVRSTEKQISAYVCVLEDQARAAAQQAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G + L G+P+ +KD + G+ T A S + P + V ++L D GAV+L Sbjct: 61 ADISAGRWKGPLHGVPVAVKDLYDIAGVPTTASSRQRTNWTPQQDCAVVRRLQDAGAVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + EFA G+ S +PW TPGGSSGGS+A VA + GTD Sbjct: 121 GKTHTHEFAYGAITPKSR-----NPW-----DPGRTPGGSSGGSAATVAACGVYLATGTD 170 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+R P+S TVG+KPTYGR SR G+ S + SLD G ITRTV D+A+ L+ +AG+D Sbjct: 171 TAGSVRIPSSMCNTVGLKPTYGRVSRAGVSSLSWSLDHPGPITRTVEDTALSLQVMAGFD 230 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D ++ PVP Y L Q ++G+ VG+PK Y D + P ++ + I LK+ GA++ Sbjct: 231 PADRGSLDEPVPSYAEGLGQGVKGLRVGVPKNYFFDRVDPEVESAVRAAIDQLKELGAEL 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE+ +P + +P + I EAS+ Y R ++ E+Y +V Sbjct: 291 VEVEVPMAEQIIPVEFGIMLPEASA----YH------RTMLRESPELYT--------ADV 332 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + + +G V + + YL+A+++RTL++R E +++ +DV++ PT P A G E Sbjct: 333 RILLELGDLVTA-----TDYLQAQRVRTLMQRAVAEMYQR-IDVLIAPTLPIPAARSG-E 385 Query: 420 ENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E ++ G + V FT N+ GLP +++P + +P+G+Q+ G+P E+TL Sbjct: 386 EVHTWPDGTVEALVMAYTRFTSFGNVTGLPTLNLPCGFSKDGLPIGMQISGRPLDEKTLL 445 Query: 475 SVGQIIEKEAGYFRPH 490 G EK + + H Sbjct: 446 RAGLAYEKATTWHQRH 461 >gi|312066555|ref|XP_003136326.1| amidase [Loa loa] gi|307768521|gb|EFO27755.1| amidase [Loa loa] Length = 466 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 158/411 (38%), Positives = 233/411 (56%), Gaps = 10/411 (2%) Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ +KDC+ T+ + T S L + Y +T+ +L++ G ++GK NMDEF MG+S+ Sbjct: 43 FPVVVKDCYMTRKVRTTCASRNLANYIAPYTATIVSRLFEEGGCLIGKANMDEFCMGTSS 102 Query: 134 ETSYYGPV---ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S++GPV +S S++ TD +PGGSSGG AV + + S+G+DTGGS R PA+F Sbjct: 103 SKSHFGPVKNGLSDEASLE-TDWRSPGGSSGGCGVAVQLGISSVSLGSDTGGSSRNPAAF 161 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TG G KP+YG SR G+I SLD +I RT RD LL+ + G D D TC++ P Sbjct: 162 TGLFGFKPSYGILSRYGLIPLVNSLDCPSVIARTARDCNFLLQVMNGRDAFDPTCIDAPS 221 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + + + + G+ VGIPKEY + LS K W + L G KI E+S+P T Y+ Sbjct: 222 SCFMQG--RPVGGVIVGIPKEYYNETLSSECWKGWNEAAKTLSALGCKIKEVSMPSTTYS 279 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + Y++++ A+ +SN+ARYDGV+YG R + +Y TRS + V+ RI G Y Sbjct: 280 IICYHVLAEADITSNMARYDGVKYGHRSSCDRSTFMLYSATRSESLNEVVRRRIFAGNYF 339 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENN-SGSMG 427 L YD ++ +A ++R LIK DF F ++G DV+LTP T PL E ++ G Sbjct: 340 LMKCHYDVYFGQALRVRRLIKMDFDRVFRKEGCDVLLTPVT-CGIPPLFSEISDIDGYKR 398 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D +T NMAG+PAISVP P+ +Q+I ++ V + Sbjct: 399 ECQDDFYTQPCNMAGVPAISVPFTRTADGFPISVQIIADHLKDGMALDVAE 449 >gi|152052|gb|AAA26183.1| enantiomerase-selective amidase [Rhodococcus sp.] Length = 462 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 171/483 (35%), Positives = 263/483 (54%), Gaps = 39/483 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + +++ ++ +K++S VEL+D + + +++A++ + A AR AA + I Sbjct: 3 LHELTLAQVAAKIENKELSPVELLDVILARVAEIEPKISAFVTITADSARKAARLAADEI 62 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L G+PIG+KD F G+ A S + + P + +KL GAVM+GK Sbjct: 63 AGGHYRGPLHGVPIGLKDLFEVAGVPNTASSRVRADYIPSSDGAAVEKLTAGGAVMIGKT 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EFA G+ T+ +PW D T TPGGSSGG++AA+A L A +GTDTGG Sbjct: 123 HTHEFAYGAITPTTR-----NPW---DPTR--TPGGSSGGTAAALAAGLIFAGMGTDTGG 172 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ GTVG+KPTYGR SR G+ S + SLD AG + RTV D+AI+L IAGYD D Sbjct: 173 SIRIPAAVCGTVGLKPTYGRVSRRGVTSLSWSLDHAGPLARTVEDAAIMLNQIAGYDRAD 232 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 V++PVPDY AL ++G+ +G+P + D + P + ++ L GA + E+ Sbjct: 233 PATVDVPVPDYAAALTGDVRGLRIGVPTNFYTDNVHPEVAAAADAAVAQLAHLGAVVREV 292 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +P + +P + + EAS+ + LR R+ + E + Sbjct: 293 KIPMAEVIVPTEWSLLVPEASAYHQQM------LR------------ERADHYTDETRTF 334 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-- 420 + G V ++ Y++A ++RTLI+ F E F Q +DV++ PT + A PL E Sbjct: 335 LEAGELVPAT-----DYIKALRVRTLIQAAFRELF-QDIDVLIAPTVSSPALPLDDLEVT 388 Query: 421 --NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + G I + N+ GLPA+SVP+ E+ +P G+Q+IG+PF EET+ +VG Sbjct: 389 WPDGTSEGGTITYVRLSAPGNVTGLPALSVPSGFTEQGLPTGIQIIGRPFDEETVLNVGH 448 Query: 479 IIE 481 E Sbjct: 449 AYE 451 >gi|23010988|ref|ZP_00051493.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Magnetospirillum magnetotacticum MS-1] Length = 226 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 141/227 (62%), Positives = 171/227 (75%), Gaps = 1/227 (0%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ LN + ++E+RD L SK SA E+ +++ AIE + + +NAYI +A AE SD Sbjct: 1 MTALNELTLAEARDGLASKQFSAREIAQAHLDAIEKARA-LNAYIVATPDRALKMAEVSD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G+AR LEG+P+GIKD FAT+G+HT A S IL+GF PHYES V+ +LW +GAVMLG Sbjct: 60 AKIAKGEARPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHYESNVSAQLWRDGAVMLG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN+DEFAMGSSNETS YG ISPWR S PGGSSGGS+AAVA LC + TDT Sbjct: 120 KLNLDEFAMGSSNETSAYGKTISPWRRQGSDTPLVPGGSSGGSAAAVAAHLCLGATATDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 GGSIRQPA+FTGTVGIKPTYGRCSR GII++A SLDQAG I RTV+D Sbjct: 180 GGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQD 226 >gi|296421138|ref|XP_002840123.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636335|emb|CAZ84314.1| unnamed protein product [Tuber melanosporum] Length = 488 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 170/479 (35%), Positives = 263/479 (54%), Gaps = 59/479 (12%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARD----LEGIPIGIKDCFATKGIHTQACSHIL 96 +N+ I V +Q + ++ + I+ D+ + ++G I +KD T T S +L Sbjct: 20 LNSLISVQSQPELLSQVQASQERISADSGESKSSIDGQLIAVKDNICTTDFPTTCASKLL 79 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 + + +++TV +K + GAV++GK NMDEF MGS + S++GPV M S + P Sbjct: 80 EQYVSPFDATVVRKAKEAGAVIMGKTNMDEFGMGSHSMYSHFGPV------MQSAEDGRP 133 Query: 157 GGSSGGSSAAVAGF----LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 S+GGSS A +C A++GTDTGGS+R PA++ G VG KP+YG SR G++++A Sbjct: 134 ARSAGGSSGGSAVAVATGMCYAALGTDTGGSVRLPAAYCGIVGFKPSYGMLSRWGVVAYA 193 Query: 213 PSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI-------QGMT 265 SLD L AI G+D+ D T + P + + Q + Sbjct: 194 NSLD-------------TLYDAINGHDDNDPTSI---TPQTRERIQDRLSRSRRRGQRLA 237 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSN 325 +G P+E+ L L + W+ ++ L +I +SLPHT++AL AYY+++PAEASSN Sbjct: 238 IGYPEEFNLVELDDPVRDAWENTLAHLNSQSHRIAPVSLPHTKHALSAYYVLAPAEASSN 297 Query: 326 LARYDGVRYGLR---VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 LA+YDGVRYG R +D L ++ TR+ FG EV+ RI+ G Y LSS D+++L+A Sbjct: 298 LAKYDGVRYGYRDPADRSQDGL-LFSPTRA-NFGAEVRRRIIAGAYSLSSEAIDNYFLKA 355 Query: 383 RKIRTLIKRDFTEAFEQ----------------GVDVILTPTTPTSAFPLGKEENNSGSM 426 + R +I+RDF+ AF Q GVDV++ P + + A L + ++ Sbjct: 356 QSARRIIQRDFSNAFAQPNYLITDNLEEGRGKEGVDVLIAPCSLSKAPFLEDVKMQKSAL 415 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 NDV TV ++AG+PAI +P E P+G+Q++ Q EET++ V +IIE+ G Sbjct: 416 DSYVNDVLTVPASLAGIPAICLPVMHGEND-PVGIQVMAQYGDEETMWEVAKIIEEGLG 473 >gi|239609137|gb|EEQ86124.1| glutamyl-tRNA amidotransferase [Ajellomyces dermatitidis ER-3] gi|327356006|gb|EGE84863.1| glutamyl-tRNA amidotransferase [Ajellomyces dermatitidis ATCC 18188] Length = 523 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 179/489 (36%), Positives = 257/489 (52%), Gaps = 66/489 (13%) Query: 53 RAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 R ++D R G + L+G + IKD T+ + T S ILD + + +TV + L Sbjct: 36 RDRVRDADVRRERGAVKSPLDGKLVAIKDNICTRDMPTTCASRILDSYTSPFNATVVESL 95 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 GA++ GK N+DEF MGS + S++GPV + + + +PGGSSGGS+ AVA Sbjct: 96 EKAGAILAGKTNLDEFGMGSHSMNSHFGPVSNVTEA--EREPISPGGSSGGSAIAVATGQ 153 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 C A++GTDTGGS+R PA++TGTVG KP+YG SR G++++A SLD G++ + + Sbjct: 154 CYAALGTDTGGSVRLPAAYTGTVGFKPSYGLVSRFGVVAYANSLDTVGVLGSNISTIREV 213 Query: 232 LKAIAGYDECDATCVNLP------VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW 285 K I D D T NLP + S+ +GIP EY + LSP + W Sbjct: 214 FKTINHPDPLDPT--NLPPTTRTRLTTAFTTRPSSLPRFRIGIPTEYNIHELSPAVRTAW 271 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDIL 344 Q I+ L G I +SLP T+ AL AYY+++PAEASSNLARYDGVRYG R D Sbjct: 272 QLSITHLHQLGHSIHPVSLPATKQALAAYYVLAPAEASSNLARYDGVRYGTRDTSAPDNA 331 Query: 345 E----MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-- 398 +Y TR GFG EV+ R+++G + LS+ D+++L+A+++R L++ DF F Sbjct: 332 GPGGYLYARTRGEGFGSEVQRRVLLGAFSLSADAIDNYFLQAQRVRRLVQGDFERVFRVG 391 Query: 399 --------------------------QGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-N 431 GVDV++ PT PT P E S Y N Sbjct: 392 NPLLPLKANTKADAVDEGGEGCLQEGAGVDVLVVPTAPT--LPPSIESLKRASAVETYMN 449 Query: 432 DVFTVAVNMAGLPAISVPAAL-------------------CEKKMPLGLQLIGQPFREET 472 DVFTV ++AGLPA+SVP + E +G+Q+IGQ ++ Sbjct: 450 DVFTVPASLAGLPALSVPVPVPVQARGLLRDSDGDGNGDGDEAFGSVGIQVIGQFGDDDM 509 Query: 473 LFSVGQIIE 481 + VG+++E Sbjct: 510 VLHVGEMLE 518 >gi|307069641|ref|YP_003878118.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Zinderia insecticola CARI] gi|306482901|gb|ADM89772.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit [Candidatus Zinderia insecticola CARI] Length = 476 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 176/478 (36%), Positives = 265/478 (55%), Gaps = 19/478 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E + L+ K IS++EL Y++ I+NS ++N +I + +K+ A+++DK I N + Sbjct: 4 SIIELSNLLKKKKISSLELTKIYLKKIKNS--KLNTFININKKKSIKDAKKADKIIYNKN 61 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI KD F TK T A S L + Y+S + +K + LGKLN DEF Sbjct: 62 NTILTGIPIAHKDIFVTKYNKTTAGSKFLKKYISPYDSFIIKKFNKFNMINLGKLNCDEF 121 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A+GS N SY+ VI+ + PGGSSGGS++AV+ L A+ +DTGGSI QP Sbjct: 122 AIGSDNSNSYFKKVINYLDKLS-----IPGGSSGGSASAVSANLIPAATASDTGGSIIQP 176 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 S G GIKPTYGR SR G+ISFA SLDQAGII+ D ILL I+G+D+ D T +N Sbjct: 177 CSLCGVTGIKPTYGRISRFGMISFASSLDQAGIISNNAEDCGILLSIISGFDKNDNTSLN 236 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + + L++S++ +G+P E+ LS I+ I K G K ++ISL Sbjct: 237 KNFEYFNKNLNKSLEKTIIGLPIEFFNQGLSIKIENKINDVIKIYKKLGVKFIDISLKKN 296 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + + Y I+S E SNL+RYDG++YG + K L+ R+ G+EVK RI+ G Sbjct: 297 KISNLTYDILSSIEVMSNLSRYDGIKYGKYNKKKKFLKNLIYNRNFNLGKEVKKRILKGL 356 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSG 424 SS+ Y + Y ++ K R I +++ F + + IL P + + K +N + Sbjct: 357 IYSSSKYYKNIYSKSLKFRYSIYKEYYNFFNNNILNCNAILIPIFSDLGYNI-KSKNINN 415 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAA----LCEKKMPLGLQLIGQPFREETLFSVGQ 478 M ND+FT++ N++GLP+IS+P KK + Q+IG ++E + ++ Sbjct: 416 KM----NDIFTISTNLSGLPSISIPCGYIKNKIYKKKNISFQIIGNYYKENKILNIAH 469 >gi|295671975|ref|XP_002796534.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paracoccidioides brasiliensis Pb01] gi|226283514|gb|EEH39080.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paracoccidioides brasiliensis Pb01] Length = 511 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 173/461 (37%), Positives = 254/461 (55%), Gaps = 57/461 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD T+ + T S IL+ + + +TV + L GA++ GK N+DEF MG Sbjct: 53 LDGKLVAVKDNICTRDMPTTCASRILETYTSPFNATVVESLERAGAIVAGKTNLDEFGMG 112 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + S++GPV + + + +PGGSSGGS+ AVA C A++GTDTGGS+R PA++ Sbjct: 113 SHSMHSHFGPVGNVVAA--GKEPISPGGSSGGSAIAVATGQCYAALGTDTGGSVRLPAAY 170 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TGT+G KP+YG SR G++++A SLD G++ + + K I D D T + Sbjct: 171 TGTIGFKPSYGLISRWGVVAYANSLDTVGVLGSKISTIRSVFKIINHPDFHDPTNLQ--- 227 Query: 251 PDYERALDQSIQGMT---------VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P L +I + +GIP EY + LSP + WQ+ I++LK+ G I Sbjct: 228 PSTRARLTSAIHKASSLRSYPTIRIGIPTEYNIHELSPAVRTAWQRTIAYLKNQGHTIHP 287 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE----MYENTRSIGFG 356 +SLP T+ AL AYY+++PAEASSNLARYDGVRYG R D +Y NTR GFG Sbjct: 288 VSLPTTKQALAAYYVLAPAEASSNLARYDGVRYGTRDTNAPDNAGPGGYLYANTRGNGFG 347 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------------- 400 EVK RI++G + LS+ ++++L+A+++R L++ DF F G Sbjct: 348 SEVKRRILLGAFSLSADAINNYFLQAQRVRRLVQTDFENVFAFGNPLLPAVGGGVGKTNA 407 Query: 401 -----VDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCE 454 VDV++ PT PT P E + Y NDVFTV ++AGLPA+SVP + Sbjct: 408 RRKYAVDVLVVPTAPT--LPPTIESLKRATPVETYMNDVFTVPASLAGLPALSVPVQIQG 465 Query: 455 KK--------------MPLGLQLIGQPFREETLFSVGQIIE 481 +G+Q+IGQ +E + +G+I+E Sbjct: 466 FNNINDGESGEDGVGVRSVGIQVIGQFGDDEFVLDIGEILE 506 >gi|159128098|gb|EDP53213.1| glutamyl-tRNA amidotransferase, A subunit, putative [Aspergillus fumigatus A1163] Length = 507 Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 175/495 (35%), Positives = 273/495 (55%), Gaps = 49/495 (9%) Query: 33 AIENSNSQMNAYIEVVAQ--KARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHT 89 A + S++ +NA+I V R +++ R +G ++ +++G I KD T+ T Sbjct: 12 ANQRSHAALNAFITTVQHLGPLREQVRDAELRRESGRSKSEVDGRLIAFKDNICTRDFPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S IL F + +TV ++L + GA++ GK N+DEF MGS S++GPV + R Sbjct: 72 TCASGILAKFTSPFNATVVEQLSEAGAIVAGKTNLDEFGMGSHCLNSWFGPVKN-QRQCQ 130 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + GGSSGGS+ +VA C A++GTDTGGS+R PA++TGTVG KP+YG SR G++ Sbjct: 131 EGRILSAGGSSGGSAVSVATDQCYAALGTDTGGSVRLPAAYTGTVGFKPSYGLVSRWGVV 190 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER---------ALDQS 260 ++A SLD GI+ + + + + + +D D T NL R L + Sbjct: 191 AYANSLDTVGILAKNASTARDVFRIVNRHDPRDPT--NLSPRSRSRIASHLQQPALLSRM 248 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 + +G+P EY + LSP++ + W I++L++ G I +SLP T+ AL AYY+++PA Sbjct: 249 TSSLRIGVPIEYNISELSPSVRRAWALSIAFLREQGHTIHPVSLPTTKLALSAYYVLAPA 308 Query: 321 EASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 EASSNLA+YDG+RYG R G+ +Y TR GFG EVK RI++G + LS+ Sbjct: 309 EASSNLAKYDGIRYGSRCNSPDSGGQPESYLYAKTRGDGFGLEVKRRILLGAFSLSADAI 368 Query: 376 DSHYLRARKIRTLIKRDFTEAF--------------------EQGVDVILTPTTPTSAFP 415 ++++++A+++R L++ DF F + VDV++ PT P+ Sbjct: 369 NNYFIQAQRVRRLVQHDFNAVFRAEQPISPSRQKGDTELKSKQAEVDVLICPTAPSCPPQ 428 Query: 416 LGK-EENNS--GSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMP-----LGLQLIGQ 466 L E +S S+ NDVFTV ++AGLPA SVP + C + G+Q+IGQ Sbjct: 429 LADLVETDSIFSSLNAYTNDVFTVPASLAGLPAASVPVRVNCRDEGSSDADLAGIQIIGQ 488 Query: 467 PFREETLFSVGQIIE 481 +E + V + +E Sbjct: 489 YGDDELVLKVSESLE 503 >gi|171684463|ref|XP_001907173.1| hypothetical protein [Podospora anserina S mat+] gi|170942192|emb|CAP67844.1| unnamed protein product [Podospora anserina S mat+] Length = 507 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 182/458 (39%), Positives = 252/458 (55%), Gaps = 57/458 (12%) Query: 76 IGIKDCFATK--GIHTQACSHILD-GFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + +KD AT G+ T S IL + E+T+ +L GAV+ GK N+DEF MGS Sbjct: 54 LAVKDNIATTIPGLPTTCASGILSKSYVSPIEATIITQLRARGAVITGKTNLDEFGMGSH 113 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + S+YGPV S D+ + + GGSSGGS+ AVA ++GTDTGGS+R PA++TG Sbjct: 114 SIYSHYGPV-----SQDTPPETSAGGSSGGSAVAVANGEVELALGTDTGGSVRLPAAYTG 168 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG----YDECDATCVNL 248 +G KP+YG SR G+I +A SLD G +++ + L+ G +D D T + Sbjct: 169 IIGYKPSYGMISRYGVIPYANSLDTVGFLSKQINPLKELIIGERGLWKEHDSNDPTSLTT 228 Query: 249 PVPD--------YERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 Y Q+ ++G+ GIP EY + L P I W L+DAGA+ Sbjct: 229 AARKRCAAQRRGYRSRQGQTTELEGLKFGIPLEYNIAELDPEIRDAWAAAAKRLQDAGAR 288 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILE----MYENTRSI 353 IV +SLP T++AL AYY+I+PAEASSNLA+YDGVRYG R EG +Y +TR Sbjct: 289 IVPVSLPTTKHALAAYYVIAPAEASSNLAKYDGVRYGARDAEGASDASAGGVLYASTRGK 348 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT------------EAFE--- 398 GFG+EVK RI++G+Y LSS D+++++A+++R L++RDF E FE Sbjct: 349 GFGEEVKRRILLGSYTLSSEAMDNYFIKAQRVRRLVRRDFNRVFALENPLQERETFELSD 408 Query: 399 -------------QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 + VD +L PT PT A P K + NDVFTV ++AGLPA Sbjct: 409 LPEEVEMEDKWGPEEVDFLLCPTAPTLA-PKLKGVMEQQPVDAYMNDVFTVPASLAGLPA 467 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ISVP + + GLQLIGQ + + L V + KE Sbjct: 468 ISVPMKVATEGAA-GLQLIGQYWDDARLLDVADAVAKE 504 >gi|70986474|ref|XP_748731.1| glutamyl-tRNA amidotransferase, A subunit [Aspergillus fumigatus Af293] gi|66846360|gb|EAL86693.1| glutamyl-tRNA amidotransferase, A subunit, putative [Aspergillus fumigatus Af293] Length = 507 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 175/495 (35%), Positives = 272/495 (54%), Gaps = 49/495 (9%) Query: 33 AIENSNSQMNAYIEVVAQ--KARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHT 89 A + S++ +NA+I V R +++ R +G ++ +++G I KD T+ T Sbjct: 12 ANQRSHAALNAFITTVQHLGPLREQVRDAELRRESGRSKSEVDGRLIAFKDNICTRDFPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S IL F + +TV ++L + GA++ GK N+DEF MGS S +GPV + R Sbjct: 72 TCASGILAKFTSPFNATVVEQLSEAGAIVAGKTNLDEFGMGSHCLNSCFGPVKN-QRQCQ 130 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + GGSSGGS+ +VA C A++GTDTGGS+R PA++TGTVG KP+YG SR G++ Sbjct: 131 EGRILSAGGSSGGSAVSVATDQCYAALGTDTGGSVRLPAAYTGTVGFKPSYGLVSRWGVV 190 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER---------ALDQS 260 ++A SLD GI+ + + + + + +D D T NL R L + Sbjct: 191 AYANSLDTVGILAKNASTARDVFRIVNRHDPRDPT--NLSPRSRSRIASHLQQPALLSRM 248 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 + +G+P EY + LSP++ + W I++L++ G I +SLP T+ AL AYY+++PA Sbjct: 249 TSSLRIGVPIEYNISELSPSVRRAWALSIAFLREQGHTIHPVSLPTTKLALSAYYVLAPA 308 Query: 321 EASSNLARYDGVRYGLRVE-----GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 EASSNLA+YDG+RYG R G+ +Y TR GFG EVK RI++G + LS+ Sbjct: 309 EASSNLAKYDGIRYGSRCNSPDSGGQPESYLYAKTRGDGFGLEVKRRILLGAFSLSADAI 368 Query: 376 DSHYLRARKIRTLIKRDFTEAF--------------------EQGVDVILTPTTPTSAFP 415 ++++++A+++R L++ DF F + VDV++ PT P+ Sbjct: 369 NNYFIQAQRVRRLVQHDFNAVFRAEQPISPSRQKGDTELKSKQAEVDVLICPTAPSCPPQ 428 Query: 416 LGK-EENNS--GSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMP-----LGLQLIGQ 466 L E +S S+ NDVFTV ++AGLPA SVP + C + G+Q+IGQ Sbjct: 429 LADLVETDSIFSSLNAYTNDVFTVPASLAGLPAASVPVRVNCRDEGSSDADLAGIQIIGQ 488 Query: 467 PFREETLFSVGQIIE 481 +E + V + +E Sbjct: 489 YGDDELVLKVSESLE 503 >gi|313898020|ref|ZP_07831559.1| putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Clostridium sp. HGF2] gi|312957048|gb|EFR38677.1| putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Clostridium sp. HGF2] Length = 473 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 162/476 (34%), Positives = 264/476 (55%), Gaps = 20/476 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +R R +D+ V ++ + + +++NA + V K + E+ I DA + G Sbjct: 4 ERARKQDVEG--RVYEALEKAKEAQARLNAAVTFVDPKEQLKELEA----IGADAA-MYG 56 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ +KD TKGI T A S ILD + P Y + + KL GAV++ K +MDE MG +N Sbjct: 57 MPVVLKDNVNTKGIRTTASSRILDNYIPVYNAHIVDKLQAAGAVVIAKASMDELGMGGTN 116 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +Y GPV + W + GGSSGGS+A VA + +IGTDTG S+R+PA++ G Sbjct: 117 RNAYTGPVNNAW-----DESRISGGSSGGSAALVAAGVVPFAIGTDTGDSVRKPAAYQGI 171 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +G+KPTYGR SR GII +A SLD G T +V+D+A+ L+ +AG D+ D T N V Y Sbjct: 172 IGMKPTYGRISRYGIIPYASSLDHVGYFTTSVQDTAVALEVLAGRDDRDMTSSNRAVEAY 231 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT--QYAL 311 L+ ++G + + + P I + + + L+ GA + + + + + Sbjct: 232 AANLNHDLRGKRIAVLDNVQEAVADPAIRENFDTLMKKLEARGATVTHVRMDDKLMKALM 291 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 P YYII+ AEA++N + DG+R+G+R G+++ ++ NTR+ GF V+ R +IG+Y L Sbjct: 292 PTYYIIANAEATANHSNLDGIRFGMREAGENVEDVMINTRTKGFCSYVRKRFVIGSYSLF 351 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS--GSMGHI 429 D + +A+K+R LI + DV++ T A PL +E +S G+ ++ Sbjct: 352 VENQDKIFRKAQKVRRLIVEELNRVLANS-DVVIASAAGTIA-PLAEESKDSHLGADNNV 409 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + + N +G P++++P E MP+G+ + + F E+TLF++G IE+E G Sbjct: 410 AENHMVLG-NFSGYPSMTMPTGFAE-GMPIGINMTAKAFDEQTLFNIGLAIEEETG 463 >gi|325479321|gb|EGC82417.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 470 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 162/476 (34%), Positives = 255/476 (53%), Gaps = 19/476 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + D + ++S + + I IE +NAYI V A A E D+++ N Sbjct: 1 MNIENLIDEYKKGNLSVEDHIKYTIDKIEAD--TLNAYISVDGDGAINKARELDQKLKNR 58 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +KD + + S +L+ F P + +TV + L A+++ K NMD Sbjct: 59 EKLGKLFGIPVVVKDNISYDQMRMTCASKMLEDFTPIFNATVVENLIKEDAIIVAKSNMD 118 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG E+SY+GP +P + PGGSS GS+ AVA S+GTDTGGS+R Sbjct: 119 EFAMGGRGESSYFGPTKNPL-----DESRAPGGSSSGSAVAVAKDDVLISLGTDTGGSVR 173 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS+ +G KPTY SR G++S A +LDQ + + + D +L + D D T Sbjct: 174 CPASYCNIIGYKPTYSLMSRSGVVSMANTLDQVSLFAKNIADIRVLANTTSSPDPKDMTS 233 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGAKIVEIS 303 + L DY+ D +G +G Y + T+ K +++ ++ LK+ GA++ E+ Sbjct: 234 I-LENYDYKYE-DYDFKGKKIGYINTSSNLYKGIEDTVGKDYEKALNQLKELGAELEEVK 291 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 L + +YA P Y ++ +E SSN++R+DGVR+G + + +++ E++ +RS G G+EV+ R Sbjct: 292 LEYAKYANPVYNVVMNSEVSSNMSRFDGVRFGYQADKYENVEELFVKSRSEGLGEEVQRR 351 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I +GT LS+ Y + KIR+LIK + + F++ D I+TPTT A LG E N Sbjct: 352 IALGTMYLSANDDQKIYKKGLKIRSLIKNELEDLFKK-YDFIITPTTTNLAPKLG--EAN 408 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + +D F V VN+AG+ IS+P K + +QLI F + L + + Sbjct: 409 DDPLSDFRSDGFNVIVNLAGMCGISLP---VRKGLSGSVQLIADRFEDNNLLNASE 461 >gi|50556760|ref|XP_505788.1| YALI0F23441p [Yarrowia lipolytica] gi|49651658|emb|CAG78599.1| YALI0F23441p [Yarrowia lipolytica] Length = 459 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 160/428 (37%), Positives = 247/428 (57%), Gaps = 25/428 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GI + +KD T +HT S IL+ F +++TV L G ++GK N+DEF MG Sbjct: 29 LAGIALAVKDNICTNEMHTTCASGILETFTSPFDATVVDLLKQEGVSIVGKANLDEFGMG 88 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S N S++GPV +P + + TPGGSSGGS+AAVA +C ++GTDTGGS+R PA+ Sbjct: 89 SDNANSWFGPVFNP---LYPDEPHTPGGSSGGSAAAVAADMCHFALGTDTGGSVRYPAAQ 145 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G+KP+YG SR G+I++A SLD GI+T+ + + + YD D T + P Sbjct: 146 CSVIGLKPSYGLISRHGVIAYAQSLDTVGILTKDIDLLEKVFNILNKYDPLDPTSLT-PH 204 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + + + +T G+ KEY + +S + W Q + L G ++V S+P + A Sbjct: 205 KRAKLKPPKPHRKLTFGLVKEYNIKGISENVKMAWSQIMDELIKMGHEVVTCSIPAIKNA 264 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 LPAYY I+PAEASSN AR+DG+RYG R + + +Y TR FG EVK R+ +GT+ Sbjct: 265 LPAYYAIAPAEASSNFARFDGIRYGSRAPEDRGEHGTLYAPTRQEYFGNEVKRRMWLGTW 324 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAF----------------EQGVDVILTPTTPTS 412 LS+ ++ Y+R++KIR +++ DF E F E GVD I+ PT+ + Sbjct: 325 NLSTDAFNHDYIRSQKIRRILQEDFDEVFNRPNVLSGNEGQKANDEPGVDFIIAPTSNCA 384 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 +PL K N+S + NDV TV ++ G+P++++P K+ +G+Q++GQ + Sbjct: 385 PYPLSK-LNDSAPVDTYLNDVLTVPASLTGIPSLNIPWK--TKQGNVGMQIMGQYGDDLG 441 Query: 473 LFSVGQII 480 + VG+++ Sbjct: 442 VMKVGRLL 449 >gi|308800126|ref|XP_003074844.1| GatA glutamyl-tRNA(Gln) amidotransferase subunit A, probable (IC) [Ostreococcus tauri] gi|119358807|emb|CAL52104.2| GatA glutamyl-tRNA(Gln) amidotransferase subunit A, probable (IC) [Ostreococcus tauri] Length = 527 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 176/489 (35%), Positives = 260/489 (53%), Gaps = 40/489 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 LR ISA EL Y++ IE + +NA+ EV + A++ D R+ G+A L GI Sbjct: 38 LREGKISASELTSLYLKRIETKDDTLNAFTEVDKIGSIEQAKKVDARLAAGEALHILAGI 97 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD +G+ T A S +L Y++ V L V+LG+ NMDEF MG++ E Sbjct: 98 PLAIKDNICRQGVSTTAGSTLLRKHLSTYDAEVVSGLKARDCVLLGQTNMDEFGMGNTTE 157 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 T P +PW + PGGSSGGS+AAVA +CA ++G+DTGGSIRQPASF G V Sbjct: 158 TGLGPPTRNPWNA-----SHVPGGSSGGSAAAVAAQMCAGALGSDTGGSIRQPASFCGVV 212 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG SR G++++ S D G I TV D + L +AI G +L Y+ Sbjct: 213 GLKPTYGTVSRHGLVAYCSSFDTIGPIGPTVEDVSYLFQAIKG---------DLKSMKYD 263 Query: 255 RALDQS------------------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 +L +S +QG + E +S + + + + ++ G Sbjct: 264 TSLRRSGDRKPLSFLEESQLPSRPLQGRRFAVIAEALGPGVSTEVRSAFLESVKHIEGIG 323 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + ++ Q LPAYY+I+ +EASSNLAR+DG R+G + ILE Y R G Sbjct: 324 GIVDLVTSRTFQRGLPAYYVIALSEASSNLARFDGTRFGSASFTQQILESYTELRQDTLG 383 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +EV+ RI++GTY+LSS D +Y RA+ + + + + D +LTP TP A+ + Sbjct: 384 EEVRRRILMGTYMLSSGYSDEYYTRAKCAQKQVCDELV-GYLSNYDALLTPATPDLAYIV 442 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISV----PAALCEKKMPLGLQLIGQPFREET 472 G++ N M D+ TV +N++GLPAI V P + +++P+G+Q IG+ F E Sbjct: 443 GEKTKNPLQM--YAGDLMTVNINLSGLPAIVVRSCEPESNPSQRLPIGIQFIGKHFCENE 500 Query: 473 LFSVGQIIE 481 L + E Sbjct: 501 LLEIAHTFE 509 >gi|253795604|ref|YP_003038700.1| putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Hodgkinia cicadicola Dsem] gi|253739912|gb|ACT34247.1| putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Hodgkinia cicadicola Dsem] Length = 472 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 151/426 (35%), Positives = 232/426 (54%), Gaps = 21/426 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD K + +A S G + ++V + G ++LGK NMDEF +G Sbjct: 60 LLGAFVAVKDQILVKNLRAEASSLCACGHMSGFSASVVDRARRAGVLVLGKANMDEFGVG 119 Query: 131 SSNETSYYGPVISPWRSMDSTD---KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +S + PV++ W + ++ + GGSSGG ++A+A ++G+DTGGS+RQP Sbjct: 120 ASGASCARMPVMNAWAACAASVAGLRALAGGSSGGCASALALACVTCALGSDTGGSVRQP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A G VG+KPTYGRCSR G+IS+ S DQ G+ ++T D A L + G D+ D T V Sbjct: 180 AFCNGVVGLKPTYGRCSRWGLISYCSSFDQVGLFSQTGADCARLASVVFGSDQKDWTSVR 239 Query: 248 LPVPDYE--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 LPVP+Y + + G+ I K + +P + W ++ L AG ++VE+ L Sbjct: 240 LPVPNYALYKLAHAGVDGL---ILKRH-----APCASEAWSFALAALARAGVRLVEVELE 291 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 LP Y ++S AE +NLAR+DGVRYGLR+ +Y RS+G+G VK ++M Sbjct: 292 FVDVVLPCYCVLSAAECLTNLARFDGVRYGLRLREASAFALYRKVRSVGYGLNVKRKLMT 351 Query: 366 GTYVLSS-RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-NS 423 G Y+L+S R YL+A ++R L+K T G + TPT P L + + + Sbjct: 352 GAYMLTSGRGRRKLYLKAERLRFLVKGCLTTLLA-GRAGLFTPTYPNRVVDLARAADVDV 410 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 G+ DV+TV ++ GLP++ VP +P GLQ++G F E +LF V + +++ Sbjct: 411 GA-----ADVYTVLASVTGLPSLHVPTGTLASGLPTGLQVVGSAFDEASLFGVCRSLQRV 465 Query: 484 AGYFRP 489 G +P Sbjct: 466 CGVLQP 471 >gi|310797880|gb|EFQ32773.1| hypothetical protein GLRG_07917 [Glomerella graminicola M1.001] Length = 508 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 161/448 (35%), Positives = 244/448 (54%), Gaps = 46/448 (10%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD AT+ + T S IL +R YE+T+ ++L + GA ++GK NMDEF MGS + Sbjct: 62 LAVKDNIATQDLPTTCSSAILSSYRSPYEATIVRQLRERGAHVVGKTNMDEFGMGSHSLN 121 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S +GPV++P + ++ + GGS+ A ++GTDTGGSIR PA++ G VG Sbjct: 122 SIHGPVLNPLSPVATSAGGSSGGSAVAVQTGEAD----VALGTDTGGSIRLPAAYCGVVG 177 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVR--DSAILLKAIAG-YDECDATCVNLPVPD 252 KP+YG SR G++ +A SLD G++ + V + + + G +D D T ++ Sbjct: 178 YKPSYGMLSRFGVVPYANSLDTVGLLAKEVGVIEDLVFGTGLDGEHDARDPTSLSQSFRK 237 Query: 253 YERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 ++ + + VGIP EY ++ L P I W L+ G +V +SLP T++AL Sbjct: 238 RQQGQGTDRRSRLRVGIPLEYNIEELDPQIRAAWSDAADKLQRLGIDVVPVSLPSTKHAL 297 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRIMIGTYV 369 AYY+I+PAEASSNLA+YDGVRYG R + D +Y TR +G G EV+ RI++G+Y Sbjct: 298 SAYYVIAPAEASSNLAKYDGVRYGTRGDESDGAGEVLYSKTRGLGLGDEVRRRILLGSYS 357 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG----------------------------V 401 LSS D+++++A+++R L++RDF F V Sbjct: 358 LSSEAMDNYFVQAQRVRRLVQRDFDRVFRLANPLYDERQFDLSDMGDGVELQDKLGPSQV 417 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP-------AALCE 454 D +L PT PT A + E + ++ NDVFTV ++AGLPAIS+P A Sbjct: 418 DFLLCPTAPTFAPRIEDIERQTPVQVYM-NDVFTVPASLAGLPAISIPTRVDAPHAEADA 476 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEK 482 + GLQLIGQ + + L V + + + Sbjct: 477 SRRVAGLQLIGQYWDDRQLLGVAKDLSR 504 >gi|256545194|ref|ZP_05472560.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaerococcus vaginalis ATCC 51170] gi|256399235|gb|EEU12846.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaerococcus vaginalis ATCC 51170] Length = 469 Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 168/480 (35%), Positives = 264/480 (55%), Gaps = 18/480 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + D+ +K+IS E + ++ I+N N +NAYI Q + A+ D+++ G Sbjct: 1 MDIKNTIDKFINKEISVYENTKNVLEKIKNDN--LNAYISFNEQDSLDRAKNLDEKLNKG 58 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +KD + K + S +L+ F P Y +TV + L A+++ K NMD Sbjct: 59 EKIGALFGIPVSVKDNISYKNMKLTCASKMLEDFEPVYNATVVENLLKEDAIIIAKTNMD 118 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETSY+GP+ +P + PGGSS GS+ +VA S+GTDTGGS+R Sbjct: 119 EFAMGGSGETSYFGPIKNPL-----DESLIPGGSSSGSAVSVAKGDVLVSLGTDTGGSVR 173 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS+ +G KPTY SR G++S A SLDQ + + V D I+ A D+ D T Sbjct: 174 QPASYCSIIGYKPTYSLMSRYGVVSMANSLDQVSLFAKNVEDLRIIANASQSPDKLDMTS 233 Query: 246 VNLPVPDYERA-LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L ++++ D S + + V I E + L ++ + I+ LK+ G++I I L Sbjct: 234 C-LDFYNFKKENFDFSGKKIAV-IKNEANIYNLDKEVEDDYNYAINILKELGSEICPIDL 291 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 +++YA Y ++ +E SSNL+R+DG+RYG + E K++ E++ RS GFG+ V+ RI Sbjct: 292 KYSKYANEVYNVVMSSEVSSNLSRFDGIRYGHQTDEYKNVEELFIKNRSEGFGENVQRRI 351 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 +GT LSS Y + K+RTLI +F FE D+ +TPTT LG +N Sbjct: 352 ALGTMYLSSEDDQKIYKQGLKLRTLIIEEFKNIFEN-YDLFITPTTVDLPSKLGVYTDN- 409 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +D+F V VN+ G IS+P + +Q+IG F+++ + + + E++ Sbjct: 410 -PLKDFSSDIFNVCVNLTGSCGISIPV---RDGISGSIQIIGDRFKDKDIINACETFERK 465 >gi|268553197|ref|XP_002634584.1| Hypothetical protein CBG08395 [Caenorhabditis briggsae] Length = 395 Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 149/393 (37%), Positives = 222/393 (56%), Gaps = 7/393 (1%) Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 T S +L+ + P +T+ ++ G ++GK N+DEF MG+S+ ++GPV S Sbjct: 5 TTCASQMLENYTPPMNATIVDRIVARGGCIIGKTNLDEFCMGTSSALGHFGPVKSALSEA 64 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 S D PGGSSGGS+ AV + ++G+DTGGS R PA+F G G KPTYG SR G+ Sbjct: 65 MSDDWLIPGGSSGGSAVAVQTGIADLALGSDTGGSTRNPAAFNGVFGFKPTYGVLSRSGL 124 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 I SLD I T + L+ +AG D D+T VNLP E +SI+ + VGI Sbjct: 125 IPLVNSLDSPSIFTTSAEACWKYLEMLAGIDAADSTSVNLP----EIQGIRSIEDLKVGI 180 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 P EY + LS K W + L+ A+I+ ISLP T+Y+L Y ++S A+ +SN+AR Sbjct: 181 PAEYNNECLSDDAWKLWNHAANILERQKAQIIPISLPTTKYSLACYSVLSAADIASNMAR 240 Query: 329 YDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 YD V YG R + EMY ++RS V+ RI G Y+L + + + +A K+R Sbjct: 241 YDSVAYGHRSKMDNSTYEMYASSRSESLNTVVRKRIFAGNYMLMKQYRELYLEKALKVRR 300 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 I + +AF++ VD+I+TPT +A P E ++ +D FT A N+AG+PAIS Sbjct: 301 KISNEIQDAFKK-VDIIITPTATGTA-PKYSELRDTLFTKEDDDDYFTQAANLAGIPAIS 358 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 VP +P+G+QL+ +++TL ++ Q++ Sbjct: 359 VPIGKGCNGLPIGVQLMANKLQDKTLCNIAQLL 391 >gi|299536063|ref|ZP_07049380.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lysinibacillus fusiformis ZC1] gi|298728487|gb|EFI69045.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lysinibacillus fusiformis ZC1] Length = 472 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 179/485 (36%), Positives = 274/485 (56%), Gaps = 34/485 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+ +V E L SK +S VEL + + E S ++N+Y+ ++A A A+E ++ Sbjct: 3 TDLHLKSVEELAPLLASKSLSPVELTKAILDFAEESQPKINSYMAFYREEALARAKEVEQ 62 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I+ G + + GIP+ +KD K T S I F Y++TV +KL D G + G Sbjct: 63 EILQGHYKGMYHGIPMALKDNLYFKDKITTMSSKIHKDFVSDYDATVVEKLRDAGVIFTG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E+A G +N +YGPV +PW DK PGGSSGGS AAVA AS+GTDT Sbjct: 123 KLSMHEYAWGITNNNPHYGPVRNPW----DLDKI-PGGSSGGSGAAVAAGASVASLGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P+S G VG+KPT+GR S+ G A SLD G +T+TV+D+A LL+ IAG+D Sbjct: 178 AGSIRIPSSACGIVGLKPTHGRVSKFGCYPLAWSLDHIGPMTKTVKDAAGLLEVIAGFDH 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D TC+++P+ +YE+ L +I+ + +GI +EY + + ++K + I L D GAK+ Sbjct: 238 RDPTCIDIPIDNYEKQLTGNIKDLVIGINEEYFFNNVDTDVEKAVRASIQSLVDQGAKVD 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + +P QYA A + S +EA++ + D+ R FG +++ Sbjct: 298 VVRIPSLQYAEWAELVTSLSEAAA-------------IHHSDL-----QKRPQDFGDDIR 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 +G L S YL+A+++R IK++FTE F + VDV+++PT P A +G + Sbjct: 340 LLFELGE--LPSAV---DYLQAQQVRRQIKQEFTEIFNK-VDVLISPTLPVVASTIGDDF 393 Query: 421 N--NSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N + I N + FT N+ GLPA+SVP + +P+GLQ+IG F+E + +VG Sbjct: 394 AVLNGKKVDLIDNIIRFTGPSNLTGLPALSVPCGF-KGNLPIGLQIIGPAFKEGRILNVG 452 Query: 478 QIIEK 482 +E+ Sbjct: 453 YAVEQ 457 >gi|293401238|ref|ZP_06645382.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305364|gb|EFE46609.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 473 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 162/480 (33%), Positives = 267/480 (55%), Gaps = 28/480 (5%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLE 72 +R R +D+ V S ++ + ++NA + V ++ A + N D L Sbjct: 4 ERARIEDVET--RVKSAVERAKEKQEELNAVVSFVDVDSQLA------DLANKDPHAPLY 55 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI +KD KG+ T A S ILD + P Y++ +++KL + GA+++ K +MDE MG + Sbjct: 56 GMPIVLKDNVNMKGVRTTASSRILDNYIPVYDAHISEKLKEAGAIVIAKSSMDELGMGGT 115 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N+ +Y G V +PW D+T GGSSGGS+ VA + +IGTDTG S+R+PA++ G Sbjct: 116 NKNAYTGKVNNPW---DTTR--ISGGSSGGSAVLVASGVVPFAIGTDTGDSVRKPAAYNG 170 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 +G+KPTYGR SR GII +A SLD G T + D+A+ L+ +AG D+ D T PVP+ Sbjct: 171 IIGMKPTYGRISRYGIIPYASSLDHVGYFTTAIEDAAVALEVLAGRDDRDMTSSYEPVPN 230 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT--QYA 310 Y ++ I+G + I + + I + + + L+ GA + + + Sbjct: 231 YASDINSDIKGKKIAILDNVQEAITNAEIKENFDALMKKLQARGAIVEHVRFDDKLMRAM 290 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 LP YYII+ AEA++N + DG+R+G+R +G + E+ N+R+ G V+ R +IG+Y L Sbjct: 291 LPVYYIIANAEATANHSNLDGIRFGMREDGASVEEVMINSRTKGLCPYVRKRFVIGSYSL 350 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + + +A+K+R LI + +A G D+++ + A P ++ + H+ Sbjct: 351 FEENQEKIFRKAQKVRRLIVDELKKAL-AGYDIVIASASGMIA-PKSEDSQDE----HLS 404 Query: 431 NDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 DV + V N +G P++S+P E MP+G+ + +PF E+TLF++G+ IE+E G Sbjct: 405 KDVLVAENYMVMGNFSGYPSMSMPTGFVE-GMPIGINMTAKPFAEQTLFNIGKAIEEETG 463 >gi|212545152|ref|XP_002152730.1| glutamyl-tRNA amidotransferase, A subunit, putative [Penicillium marneffei ATCC 18224] gi|210065699|gb|EEA19793.1| glutamyl-tRNA amidotransferase, A subunit, putative [Penicillium marneffei ATCC 18224] Length = 516 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 165/495 (33%), Positives = 272/495 (54%), Gaps = 53/495 (10%) Query: 39 SQMNAYIEVVAQKARAA--AEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHI 95 +++NA+I + A ++D R NG ++ L+G I IKD T+ + T S + Sbjct: 18 TELNAFITPLQSLGTYADRIRDADIRRENGTSKSPLDGRLIAIKDNICTRSLPTTCASRM 77 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L+ F +++TV + L + GA++ GK N+DEF MGS + S++GPV + + ++D + Sbjct: 78 LEKFSSPFDATVIKSLENAGAIIGGKTNLDEFGMGSHSTHSHFGPVKNYFETVDGSLSAG 137 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 + A C A++GTDTGGS+R PA++TG VG KP+YG SR G+I++A SL Sbjct: 138 GSSGGSAVAVATDQ--CYAALGTDTGGSVRLPAAYTGVVGFKPSYGLISRWGVIAYANSL 195 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVN--------LPVPDYERALDQSIQGMTVG 267 D GI+ + + + +D D T ++ V + S + + +G Sbjct: 196 DTVGILAKRTSTVHEVFNILNHHDGQDPTSLSTATRSRIATAVSQLHSSSRLSSRPLRIG 255 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 +P EY L ++ T+ + W + L+ G + ISLP T++AL AYY+++PAEASSNLA Sbjct: 256 VPIEYNLTEMASTVREAWLSALRTLEQQGHTLHPISLPSTKHALSAYYVLAPAEASSNLA 315 Query: 328 RYDGVRYGLRVEGKDILE------MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 +YDG+RYG R +G D E +Y TR GFG EV+ RI++G++ LS+ D+++++ Sbjct: 316 KYDGIRYGKRADGPDKGEEGSKDYLYSRTRGEGFGDEVRRRILLGSFSLSADAMDNYFVQ 375 Query: 382 ARKIRTLIKRDFTEAF-------------------EQGVDVILTPTT---PTSAFPLGKE 419 A+++R L++ DF F E VDVI+ PTT P S + ++ Sbjct: 376 AQRVRRLVQNDFDHIFALKNPLGDDAEVENQASPTETKVDVIIGPTTASLPPSLASVTED 435 Query: 420 ENNSGSMG-HIY-NDVFTVAVNMAGLPAISVPAALC-------EKKMP---LGLQLIGQP 467 ++ + S H Y DV TV ++AGLPA+SVP ++ + K+ +G+Q+IGQ Sbjct: 436 QDAAVSAPLHSYVTDVCTVPASLAGLPAVSVPISVTSTGESQEDGKLAFNKVGIQIIGQY 495 Query: 468 FREETLFSVGQIIEK 482 ++ + V ++E+ Sbjct: 496 GDDDLVLKVAGLLEE 510 >gi|148643313|ref|YP_001273826.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanobrevibacter smithii ATCC 35061] gi|166217683|sp|A5UMN0|GATA_METS3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|148552330|gb|ABQ87458.1| glutamyl-tRNA (Gln) amidotransferase subunit A, GatA [Methanobrevibacter smithii ATCC 35061] Length = 456 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 175/479 (36%), Positives = 262/479 (54%), Gaps = 26/479 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E + +++K+++A E V+++I+ I+ N ++N ++EV + A AE D++I NG Sbjct: 1 MNVIEKLNSIQNKEMTAKENVENFIKVIDEKNEELNIFLEVNKESALKQAEAIDEKIANG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ GIK + A S LD + Y +TV K+ ++LG NMD Sbjct: 61 EKVGFLSGLVFGIKANINVEDYIISAASKTLDNYFGSYNATVIDKILAQDGIILGITNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETS +GP +P + PGGSSGGS+AAVA +C ++G+DTGGSIR Sbjct: 121 EFAAGSSTETSCFGPTQNP-----AAPGRIPGGSSGGSAAAVAAEMCDIALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G VG KPTYG SR G++ + SLDQ G ++ A+ L AI+ YDE + T Sbjct: 176 NPASHCGVVGFKPTYGAVSRQGLLDLSMSLDQIGPLSNDTSGIALALNAISDYDETECTT 235 Query: 246 VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PD+ AL++ S++GM + + KE+ +D I+ + I L +AGA++VE+S Sbjct: 236 LHGKRPDFTSALEEKSLEGMKIAVCKEF-IDVTDAEINVAVNKAIHKLVEAGAELVEVSF 294 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + LP YY+I+ E S +YDG YG R+E D+ G+EV RI Sbjct: 295 DNIDLCLPTYYLINYVEFFSATRKYDGRDYGYRIE--DVC-----------GEEVLRRIE 341 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IG+Y+ Y +A + R+LI RD A + VD+I+ PT P +G E Sbjct: 342 IGSYISQKEYSGKFYKKALQARSLI-RDEINAMLENVDLIVGPTVPKLPHKIGDELT--- 397 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 M DV TV N+AG+PA S+ A + +P+GLQ+ +P + + + E E Sbjct: 398 PMEMYAYDVLTVIANLAGIPAGSIKAGEVD-GIPVGLQIQAKPLDDLKIIKAMSVFENE 455 >gi|302507574|ref|XP_003015748.1| amidase, putative [Arthroderma benhamiae CBS 112371] gi|291179316|gb|EFE35103.1| amidase, putative [Arthroderma benhamiae CBS 112371] Length = 541 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 176/481 (36%), Positives = 262/481 (54%), Gaps = 77/481 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G IG+KD T + T S L F + +TV L + GA++ GK N+DEF MG Sbjct: 65 LDGKLIGVKDNICTSELPTTCGSATLQDFTSPFNATVVDLLENAGAIVAGKTNLDEFGMG 124 Query: 131 SSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAAS-----IGTDTGGSI 184 S + S++GPV ++ + D+F + GGSSGGS+ AVA C A+ +GTDTGGS+ Sbjct: 125 SHSIHSHFGPV----KNKNGGDEFYSAGGSSGGSAIAVATGQCHAANSSRALGTDTGGSV 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGII---TRTVRD-------------- 227 R PA++TG G KP+YG SR G++++A SLD GI T T+ D Sbjct: 181 RLPAAYTGVFGFKPSYGLISRWGVVAYANSLDTVGIFAKDTSTIHDIFGKPERFIMQPLP 240 Query: 228 --SAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG-------MTVGIPKEYRLDYLS 278 + +L + YD D T ++ P + +++ + +G+P EY + LS Sbjct: 241 ITNIRILDVVNRYDSRDPTSIS---PTSRSRILTAVREESARPTRLRIGVPLEYNIHELS 297 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR- 337 P I WQ + +L+ G I I+LP T+ AL AYY+++PAEASSNL++YDGVRYG R Sbjct: 298 PEIRSAWQITLEYLQSKGHSIHPITLPATKQALSAYYVLAPAEASSNLSKYDGVRYGTRD 357 Query: 338 VEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 +E D +Y NTR GFG EV+ RI++GT+ LS+ D+++++A+KIR L++ DF Sbjct: 358 IESADNAGDYLYSNTRGKGFGAEVRRRILLGTFSLSADKIDNYFIQAQKIRRLVQADFNS 417 Query: 396 AF---------------------------EQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 F +DVI+ PT P++A P K NS + Sbjct: 418 VFRLQHPLLHAASTTLGSRDLVDKEDAGRNAKIDVIICPTAPSAA-PAIKALENSSPIDA 476 Query: 429 IYNDVFTVAVNMAGLPAISVPAAL-----CEKKMP--LGLQLIGQPFREETLFSVGQIIE 481 NDVFTV ++AGLPA+SVP + +P G+Q+IGQ ++ + VG+++E Sbjct: 477 YTNDVFTVPCSLAGLPALSVPILFDGEESKSQSVPRHAGVQVIGQFGDDDMVLEVGKMLE 536 Query: 482 K 482 + Sbjct: 537 E 537 >gi|312136581|ref|YP_004003918.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a [Methanothermus fervidus DSM 2088] gi|311224300|gb|ADP77156.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanothermus fervidus DSM 2088] Length = 455 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 168/477 (35%), Positives = 258/477 (54%), Gaps = 26/477 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + E +++++ISAVE ++++I I+ N ++NA+IE+ + AR AEE DK+I G Sbjct: 1 MEILEKVKAIKNQEISAVENLENFIDTIKKKNPKINAFIEIDEEGARKTAEEIDKKIARG 60 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ I IK +G A S L+ + Y++TV +++ + +++G NMD Sbjct: 61 EKTGKLAGLVIAIKSNINVEGFTVSAGSKTLENYVSGYDATVIKRIKNEDGIIIGMTNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETSYYGP +P S + PGGSSGGS+AA+A +C ++G+DTGGSIR Sbjct: 121 EFACGSSTETSYYGPTDNP-----SAPGYIPGGSSGGSAAAIAADMCDIALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G +G KPTYG SR G+I A SLDQ G V +++L I GYD D T Sbjct: 176 NPAACCGVIGFKPTYGFVSRYGLIDLAMSLDQIGPFANDVTGISLMLDTIVGYDPADPTT 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + P + L+ +I+ M VGI KE++ + +I K +S L G +I E+ Sbjct: 236 MKIK-PSFTNNLEGNIENMKVGIVKEFQ-EVSQDSIVKVVNDIVSELDAHGVEIQELKFD 293 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + LP YY+I+ E S +YDG +YG R+E G+EV RI I Sbjct: 294 YIDLVLPTYYLINFVEFFSATRKYDGRKYGYRIEEV-------------CGEEVLRRIQI 340 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+Y+ +Y RA + R+LI+++F + + VD+I+ PT P +G E Sbjct: 341 GSYISQKEYSGKYYRRALQARSLIRKEFMKLLKD-VDIIIGPTLPKLPHKIGTEIE---P 396 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D+ T N+ G+PA SV K +P+G+Q+ + + + I+K Sbjct: 397 LEMYKYDILTCLTNLVGIPAASVDVGKI-KNIPVGVQIQAKACEDYKVLQAAHAIKK 452 >gi|223986652|ref|ZP_03636644.1| hypothetical protein HOLDEFILI_03966 [Holdemania filiformis DSM 12042] gi|223961383|gb|EEF65903.1| hypothetical protein HOLDEFILI_03966 [Holdemania filiformis DSM 12042] Length = 474 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 163/466 (34%), Positives = 261/466 (56%), Gaps = 15/466 (3%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 +A E V++ + + S ++NA + V + + AA ++ I +G G+P+ +KD Sbjct: 12 TARERVEAAVAKAQASQPRLNAVVTFVDVEDQLAALDT---IPDGP---FHGMPVVLKDN 65 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 T+G+ T A S ILD + P Y + + KL GAV++ K +MDE AMG +N T+ GPV Sbjct: 66 VCTRGVRTTASSKILDNYVPVYNAHIVDKLKAAGAVVIAKASMDELAMGGTNLTAATGPV 125 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +P+ D T GSSGGS+A VA + ++G+DTG S+R+PASF G +G+KPTYG Sbjct: 126 YNPY---DRTRMAG--GSSGGSAALVAAGVVPFAVGSDTGDSVRKPASFCGVLGMKPTYG 180 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R SR GII ++ SLD G TR+ D+A LK +AG D+ D T + PVPDY AL+ I Sbjct: 181 RISRYGIIPYSSSLDHVGYFTRSALDAAEALKVLAGRDDRDMTSSDRPVPDYAAALNSEI 240 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--TQYALPAYYIISP 319 +G V I K +P + +++ + LK GA + E+SL + LPAYY+I+ Sbjct: 241 KGRRVAIFKNVIDALANPEVKALFEKTVEALKAKGAVVEEVSLREDLLKAILPAYYLIAN 300 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 EA++N + DG+R+G++ G + E+ +R+ GFG ++ R +IG+Y L + + Sbjct: 301 CEATANHSNLDGIRFGVQQPGSSMEEIMIQSRTKGFGSLIRKRFVIGSYGLFVENQEKLF 360 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 +A+++R LI + E + D+++ P + A L + S G++ + V N Sbjct: 361 RQAQRVRRLIVENVAEVMKD-YDILIAPASSDVAPKLDDHSRDELSDGYLIAENHMVIGN 419 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 G P+ +VP L E +P+GL + + + E++LF +E G Sbjct: 420 FTGYPSCTVPMGLIE-GLPVGLNMTAKAWDEQSLFDFAAAMEDITG 464 >gi|327297665|ref|XP_003233526.1| glutamyl-tRNA amidotransferase [Trichophyton rubrum CBS 118892] gi|326463704|gb|EGD89157.1| glutamyl-tRNA amidotransferase [Trichophyton rubrum CBS 118892] Length = 506 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 51/490 (10%) Query: 39 SQMNAYIEVVAQKA--RAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHI 95 + +NA+I + + A R A+ +D R A L+G +G+KD T + T S Sbjct: 18 ASLNAFITPLERSATWRERAQAADHRRGKDVAISPLDGKLVGVKDNICTSELPTTCGSAT 77 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT 155 L F + +TV L + GA++ GK N+DEF MGS + S++GPV + + ++F Sbjct: 78 LQDFTSPFNATVVDLLENAGAIVAGKTNLDEFGMGSHSIHSHFGPVKN---NKGGGEEFH 134 Query: 156 PGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 G S G SA C A++GTDTGGS+R PA++TG G KP+YG SR G++++A S Sbjct: 135 SAGGSSGGSAVAVATGQCHAALGTDTGGSVRLPAAYTGVFGFKPSYGLISRWGVVAYANS 194 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE-----RALDQSIQGMTVGIP 269 LD GI + + + YD D T ++ P R + +G+P Sbjct: 195 LDTVGIFAKDTSTIHDIFDVVNRYDSRDPTSIS-PTSRSRILAAVREASAQPTRLRIGVP 253 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 EY + LS I WQ + +L+ G I I+LP T+ AL AYY+++PAEASSNLA+Y Sbjct: 254 LEYNIHELSSEIRSAWQIALQYLESKGHSIHPITLPATKQALSAYYVLAPAEASSNLAKY 313 Query: 330 DGVRYGLR-VEGKDILE--MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 DGVRYG R +E D +Y NTR GFG EV+ RI++GT+ LS+ D+++++A+KIR Sbjct: 314 DGVRYGTRDIESADNAGDYLYSNTRGQGFGAEVRRRILLGTFSLSADKIDNYFIQAQKIR 373 Query: 387 TLIKRDFTEAF---------------------------EQGVDVILTPTTPTSAFPLGKE 419 L++ DF F +DVI+ PT P++A P K Sbjct: 374 RLVQADFNSVFRLPHPLLHVASTTPGSRDLADNEDAGGNAKIDVIICPTAPSTA-PAIKA 432 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-----CEKKMP--LGLQLIGQPFREET 472 S + NDVFTV ++AGLPA+SVP + +P G+Q+IGQ + Sbjct: 433 LKKSSPIDAYTNDVFTVPCSLAGLPALSVPILFDGEESKSQSVPRHAGVQVIGQFGDDSM 492 Query: 473 LFSVGQIIEK 482 + VG+++E+ Sbjct: 493 VLEVGKMLEE 502 >gi|261349894|ref|ZP_05975311.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanobrevibacter smithii DSM 2374] gi|288860677|gb|EFC92975.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanobrevibacter smithii DSM 2374] Length = 456 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 174/479 (36%), Positives = 261/479 (54%), Gaps = 26/479 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E + +++K+++A E V+++I+ I+ N ++N ++EV + A AE D++I NG Sbjct: 1 MNVIEKLNSIQNKEMTAKENVENFIKVIDEKNEELNIFLEVNKESALKQAEAIDEKIANG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ GIK + A S LD + Y +TV K+ ++LG NMD Sbjct: 61 EKVGFLSGLVFGIKANINVEDYIISAASKTLDNYFGSYNATVIDKILAQDGIILGITNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETS +GP +P + PGGSSGGS+AAVA +C ++G+DTGGSIR Sbjct: 121 EFAAGSSTETSCFGPTQNP-----AAPGRIPGGSSGGSAAAVAAEMCDIALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G VG KPTYG SR G++ + SLDQ G ++ A+ L AI+ YDE + T Sbjct: 176 NPASHCGVVGFKPTYGAVSRQGLLDLSMSLDQIGPLSNDTSGIALALNAISDYDETECTT 235 Query: 246 VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PD+ L++ S++GM + + KE+ +D I+ + I L +AGA++VE+S Sbjct: 236 LHGKRPDFTNVLEEKSLEGMKIAVCKEF-IDVTDAEINVAVNKAIHKLVEAGAELVEVSF 294 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + LP YY+I+ E S +YDG YG R+E D+ G+EV RI Sbjct: 295 DNIDLCLPTYYLINYVEFFSATRKYDGRDYGYRIE--DVC-----------GEEVLRRIE 341 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IG+Y+ Y +A + R+LI RD A + VD+I+ PT P +G E Sbjct: 342 IGSYISQKEYSGKFYKKALQARSLI-RDEINAMLENVDLIVGPTVPKLPHKIGDELT--- 397 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 M DV TV N+AG+PA S+ A + +P+GLQ+ +P + + + E E Sbjct: 398 PMEMYAYDVLTVIANLAGIPAGSIKAGEVD-SIPVGLQIQAKPLDDLKIIKAMSVFENE 455 >gi|302652008|ref|XP_003017867.1| amidase, putative [Trichophyton verrucosum HKI 0517] gi|291181446|gb|EFE37222.1| amidase, putative [Trichophyton verrucosum HKI 0517] Length = 541 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 177/481 (36%), Positives = 262/481 (54%), Gaps = 77/481 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G IG+KD T + T S L F + +TV L + GA++ GK N+DEF MG Sbjct: 65 LDGKLIGVKDNICTSELPTTCGSATLQDFTSPFNATVVDLLENAGAIVAGKTNLDEFGMG 124 Query: 131 SSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAAS-----IGTDTGGSI 184 S + S++GPV ++ + D+F + GGSSGGS+ AVA C A+ +GTDTGGS+ Sbjct: 125 SHSIHSHFGPV----KNKNGGDEFYSAGGSSGGSAIAVATGQCHAANSSRALGTDTGGSV 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGII---TRTVRD-------------- 227 R PA++TG G KP+YG SR G++++A SLD GI T T+ D Sbjct: 181 RLPAAYTGVFGFKPSYGLISRWGVVAYANSLDTVGIFAKDTSTIHDIFGKPERFIMQPLS 240 Query: 228 --SAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG-------MTVGIPKEYRLDYLS 278 + +L + YD D T ++ P + +++ + VG+P EY + LS Sbjct: 241 ITNIRILDVVNRYDSRDPTSIS---PTSRSRILTAVREASARPTRLRVGVPFEYNIHELS 297 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR- 337 P I WQ + +L+ G I I+LP T+ AL AYY+++PAEASSNL++YDGVRYG R Sbjct: 298 PEIRSAWQITLEYLQSKGHSIHPITLPATKQALSAYYVLAPAEASSNLSKYDGVRYGTRD 357 Query: 338 VEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 +E D +Y NTR GFG EV+ RI++GT+ LS+ D+++++A+KIR L++ DF Sbjct: 358 IESADNAGDYLYSNTRGKGFGAEVRRRILLGTFSLSADKIDNYFIQAQKIRRLVQADFDS 417 Query: 396 AF---------------------------EQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 F +DVI+ PT P++A P K NS + Sbjct: 418 VFRLQHPLLHAASTTLGSRDLVDKEDAGRNAKIDVIICPTAPSAA-PAIKALENSSPIDA 476 Query: 429 IYNDVFTVAVNMAGLPAISVPAAL-----CEKKMP--LGLQLIGQPFREETLFSVGQIIE 481 NDVFTV ++AGLPA+SVP + +P G+Q+IGQ ++ + VG+++E Sbjct: 477 YTNDVFTVPCSLAGLPALSVPILFDGEESKSQSVPRHAGVQVIGQFGDDDMVLEVGKMLE 536 Query: 482 K 482 + Sbjct: 537 E 537 >gi|254568382|ref|XP_002491301.1| Putative protein similar to bacterial glutamyl-tRNA amidotransferases [Pichia pastoris GS115] gi|238031098|emb|CAY69021.1| Putative protein similar to bacterial glutamyl-tRNA amidotransferases [Pichia pastoris GS115] gi|328352182|emb|CCA38581.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Pichia pastoris CBS 7435] Length = 483 Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 156/449 (34%), Positives = 243/449 (54%), Gaps = 55/449 (12%) Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD T S +L +R +++TV + L + G V++GK NMDE MGS+N S Sbjct: 45 AIKDNICGIPEPTTCGSKMLKNYRSPFKATVLEMLENYGTVIVGKTNMDELGMGSTNTNS 104 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF---------------------LCAAS 175 +GPV +P S D T K + S + + + Sbjct: 105 VFGPVYNP--SFDKTQKKLSKYTLSESQDIEETYDFPKHIAGGSSGGSAAAVASNVVDFA 162 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDTGGS+R PAS+ G VG KPTYGR SR G+I +A S D GI++R V S ++ + Sbjct: 163 LGTDTGGSVRLPASYCGVVGFKPTYGRLSRWGVIQYAQSFDTVGILSRDVDTSKVVFDYL 222 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQ-------GMTVGIPKEYRLDYLSPTIDKTWQQG 288 +DE D T + +P + +D+ ++ + +GIPK+ LD + + ++W + Sbjct: 223 NEFDEKDPTSL---LPSHRERIDELVETRNKGLHKLRIGIPKQLNLD-IDSNVRESWIKL 278 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGK-DILE 345 IS L D I + +P ++++P+YY + P+EA+SNLARYDG+RYG R ++ K D+L Sbjct: 279 ISQLFDQDHDIYPVDIPSVEHSIPSYYTLVPSEAASNLARYDGIRYGYRSKLDSKGDVL- 337 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------- 398 + TR GFG+EVK RI+IG + LS Y HYL+A+ +R IK DF + F Sbjct: 338 -FAPTRDEGFGEEVKRRILIGNFNLSHEAYIIHYLKAQNLRHQIKLDFDKVFRFPNVLTS 396 Query: 399 -----QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 +GVD+++ PT+ ++A P +E N+ + ND TV ++AGLP S+P Sbjct: 397 SQPSSEGVDILIAPTSLSTA-PTVEEANSMTPLEVFVNDALTVPSSLAGLPTCSIPMKTP 455 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 E P+G+Q+IGQ + + + ++I++ Sbjct: 456 E---PIGMQVIGQFGDDNLVLNASRLIQQ 481 >gi|222445549|ref|ZP_03608064.1| hypothetical protein METSMIALI_01189 [Methanobrevibacter smithii DSM 2375] gi|222435114|gb|EEE42279.1| hypothetical protein METSMIALI_01189 [Methanobrevibacter smithii DSM 2375] Length = 456 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 175/479 (36%), Positives = 261/479 (54%), Gaps = 26/479 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E + +++K+++A E V+++I+ I+ N ++N ++EV + A AE D++I NG Sbjct: 1 MNVIEKLNSIQNKEMTAKENVENFIKVIDEKNEELNIFLEVNKESALKQAEAIDEKIANG 60 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ GIK + A S LD + Y +TV K+ ++LG NMD Sbjct: 61 EKVGFLSGLVFGIKANINVEDYIISAASKTLDNYFGSYNATVIDKILAQDGIILGITNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETS +GP +P + PGGSSGGS+AAVA +C ++G+DTGGSIR Sbjct: 121 EFAAGSSTETSCFGPTQNP-----AAPGRIPGGSSGGSAAAVAAEMCDIALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G VG KPTYG SR G++ + SLDQ G + A+ L AI+ YDE + T Sbjct: 176 NPASHCGVVGFKPTYGAVSRQGLLDLSMSLDQIGPLANDTSGIALALNAISDYDETECTT 235 Query: 246 VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ PD+ AL++ S++GM + + KE+ +D I+ + I L +AGA++VE+S Sbjct: 236 LHGKRPDFTSALEEKSLEGMKIAVCKEF-IDVTDTEINVAVNKAIHKLVEAGAELVEVSF 294 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + LP YY+I+ E S +YDG YG R+E D+ G+EV RI Sbjct: 295 DNIDLCLPTYYLINYVEFFSATRKYDGRDYGYRIE--DVC-----------GEEVLRRIE 341 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IG+Y+ Y +A + R+LI RD A + VD+I+ PT P +G E Sbjct: 342 IGSYISQKEYSGKFYKKALQARSLI-RDEINAMLKNVDLIVGPTVPKLPHKIGDELT--- 397 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 M DV TV N+AG+PA S+ A + +P+GLQ+ +P + + + E E Sbjct: 398 PMEMYAYDVLTVIANLAGIPAGSIKAGEVD-GIPVGLQIQAKPLDDLKIIKAMSVFENE 455 >gi|126652897|ref|ZP_01725040.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus sp. B14905] gi|126590317|gb|EAZ84438.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus sp. B14905] Length = 472 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 180/485 (37%), Positives = 271/485 (55%), Gaps = 34/485 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+ +V E L+SK +S VEL + + E S ++NAY+ ++A + A E +K Sbjct: 3 TDLHLKSVEELAPLLQSKALSPVELTKAILDFAEESQPKINAYMAFYQEEALSQANEIEK 62 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I+ G + + GIP+ +KD K T S I F +Y++TV +KL D G + G Sbjct: 63 EILQGQYKGMYHGIPMALKDNLYFKNKITTMSSKIHKDFVSNYDATVVEKLRDAGVIFTG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E+A G +N +YGPV +PW DK PGGSSGGS AAVA AS+GTDT Sbjct: 123 KLSMHEYAWGITNNNPHYGPVRNPW----DLDKI-PGGSSGGSGAAVAAGASVASLGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P+S G VG+KPT+GR S+ G A SLD G +T+TV+D+A LL+ I+G+D Sbjct: 178 AGSIRIPSSACGIVGLKPTHGRVSKYGCYPLAWSLDHIGPMTKTVKDAAGLLEVISGFDH 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D TC+++P +Y + + + + + +GI +EY + I+K + I L D GAK+ Sbjct: 238 RDPTCIDVPTDNYVQQISGNSKDLVIGINEEYFFKDVDADIEKAVRASIQSLVDQGAKVE 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + +P QYA A + S +EA++ + D+ R FG +++ Sbjct: 298 IVRIPSLQYAEWAELVTSLSEAAA-------------IHHSDL-----QKRPQDFGDDIR 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +G L S YL+A+++R IK++F E F Q VDV++TPT P A +G + Sbjct: 340 LLFELGE--LPSAV---DYLQAQQVRRQIKQEFNEIFNQ-VDVLITPTLPVVANTIGDDF 393 Query: 420 -ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N + I N + FT N+ GLPA+SVP + +P+GLQ+IG F+E + +VG Sbjct: 394 AELNGKKVDLIDNIIRFTGPSNLTGLPALSVPCGF-KGNLPIGLQIIGPAFKEGRILNVG 452 Query: 478 QIIEK 482 IE+ Sbjct: 453 YAIEQ 457 >gi|15679493|ref|NP_276610.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanothermobacter thermautotrophicus str. Delta H] gi|3334118|sp|O27540|GATA_METTH RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|2622613|gb|AAB85971.1| amidase [Methanothermobacter thermautotrophicus str. Delta H] Length = 454 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 168/462 (36%), Positives = 258/462 (55%), Gaps = 28/462 (6%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + D +++ ++A E ++ +++ IE N +NA++EV ++A AEE D RI +G Sbjct: 4 METVDKVDMIKNHGLTASENLEKFLKRIEAKNDDINAFLEVRGEEAIKRAEEIDARIASG 63 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ IG+K + + A S L+ + Y++TV +++ + +++G NMD Sbjct: 64 KETGKLAGLVIGVKSNINVEDFNVSAASKTLENYTGSYDATVIRRIKEEDGIIIGMTNMD 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETS++GP +P + PGGSSGGS+AAVA +C ++G+DTGGSIR Sbjct: 124 EFAAGSSTETSFFGPTDNP-----AAPGRIPGGSSGGSAAAVAAGMCDLALGSDTGGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G +G KPTYG SR G++ A S DQ G + V ++ L I+GYD D T Sbjct: 179 NPASHCGVMGFKPTYGAVSRQGLLDLAMSFDQIGPLAADVSGISLALDVISGYDPADPTT 238 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ PD E +++ ++G+ VG+ +E+ L+ ID+ Q + ++D GA+IVE+ Sbjct: 239 LD-SSPDLE--VERELKGLRVGVVREF-LEVTDEAIDEVIQGKLGAMEDEGAEIVELDFG 294 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + LP YY+I+ E S +YDG +YG R+E D+ G EV RI + Sbjct: 295 YIDLCLPTYYLINYVEFFSATRKYDGRKYGHRIE--DVC-----------GSEVLRRIHM 341 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+Y+ +Y RA + R+LI+R+ T VD+I PT P LG+E Sbjct: 342 GSYISQKELSGKYYKRALQARSLIRREITGLLSH-VDIIAGPTVPKLPHTLGEELE---P 397 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 M DV TV N+AG+PA S+PA +P+GLQL +P Sbjct: 398 MEMYAYDVLTVIANLAGIPAASIPAGDV-GGVPVGLQLQAKP 438 >gi|242814791|ref|XP_002486442.1| glutamyl-tRNA amidotransferase, A subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218714781|gb|EED14204.1| glutamyl-tRNA amidotransferase, A subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 515 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 180/498 (36%), Positives = 277/498 (55%), Gaps = 57/498 (11%) Query: 39 SQMNAYIEVVAQKARAA--AEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHI 95 +++NA+I + A ++D R NG + L+G I IKD T+ + T S + Sbjct: 18 TELNAFITPLQSLGSYADRIRDADVRRENGTLKSPLDGRLIAIKDNICTRSLPTTCASRM 77 Query: 96 LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD---STD 152 L+ F +++TV L + GA++ GK N+DEF MGS + S++GPV + + ++ S Sbjct: 78 LEKFTSPFDATVINSLENAGAIIGGKTNLDEFGMGSHSTHSHFGPVKNYFDIVNGDGSER 137 Query: 153 KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 + GGSSGGS+ AVA C A++GTDTGGS+R PA++TG VG KP+YG SR G+I++A Sbjct: 138 SLSAGGSSGGSAVAVATDQCYAALGTDTGGSVRLPAAYTGIVGFKPSYGLISRWGVIAYA 197 Query: 213 PSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER----------ALDQSIQ 262 SLD GI+ + + + +D D T NL R + S + Sbjct: 198 NSLDTVGILAKRTSIVREVFNILNHHDARDPT--NLSTSTRSRIATAVSQLHSSSRLSSR 255 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 + +G+P EY L ++ + K W + L+ G + ISLP T++AL AYYI++PAEA Sbjct: 256 PLRIGVPIEYNLTEMTSDVRKVWLSTLQTLEKQGHTLHPISLPSTKHALSAYYILAPAEA 315 Query: 323 SSNLARYDGVRYGLRVEGKDILE-----MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 SSNLA+YDG+RYG R EG D E +Y TR GFG EV+ RI++G++ LS+ D+ Sbjct: 316 SSNLAKYDGIRYGTRAEGPDKGEEPNDYLYARTRGEGFGDEVRRRILLGSFSLSADAMDN 375 Query: 378 HYLRARKIRTLIKRDFTEAF--------------------EQGVDVILTPTT---PTSAF 414 ++++A+++R L++ DF F E VDVI+ PTT P S Sbjct: 376 YFIQAQRVRRLVQNDFDNVFALKNPLGDDAEVENRAPSPAETKVDVIIGPTTASLPPSLA 435 Query: 415 PLGKEENNSGSMG-HIY-NDVFTVAVNMAGLPAISVPA------ALCEKKM---PLGLQL 463 + ++++++ S H Y DV TV ++AGLPAISVP +L + K +G+Q+ Sbjct: 436 SVTEDQDSAVSAPLHSYVTDVCTVPASLAGLPAISVPVPAPTGKSLGDGKTGFDKVGIQI 495 Query: 464 IGQPFREETLFSVGQIIE 481 IGQ + + V +++E Sbjct: 496 IGQYGDDNLVLRVAELLE 513 >gi|304313857|ref|YP_003849004.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanothermobacter marburgensis str. Marburg] gi|302587316|gb|ADL57691.1| predicted aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanothermobacter marburgensis str. Marburg] Length = 451 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 170/470 (36%), Positives = 258/470 (54%), Gaps = 28/470 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + + ++ ++A E ++ +I+ I N +NA+IEV ++A AEE D RI +G Sbjct: 1 MEIMDKVEMIKDHGMTASENLERFIRTIRAKNDDVNAFIEVREEEAFQRAEEIDSRIASG 60 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ IG+K +G A S L+ + Y++TV +++ + +++G NMD Sbjct: 61 ERTGKLAGLVIGVKSNINVEGFTVSAASRTLENYTGSYDATVIRRIKEEDGIIIGMTNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETS++GP +P S PGGSSGGS+AAVA +C ++G+DTGGSIR Sbjct: 121 EFAAGSSTETSFFGPTDNP-----SAPGRIPGGSSGGSAAAVAAGMCDIALGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G +G KPTYG SR G++ A S DQ G + V + L+ I+G D D T Sbjct: 176 NPASHCGVMGFKPTYGLVSRQGLLDLAMSFDQIGPLAADVSGLQLTLEVISGQDPTDPTT 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + D E +D+ ++ + G+ KE+ L+ +ID Q+ + + D GA+IVE+ Sbjct: 236 I---AEDQELGVDRELKDIRFGVVKEF-LEVTDDSIDAAIQRKLDLIGDEGAEIVELDFG 291 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + LP YY+I+ E S +YDG +YG R+E D+ G EV RI + Sbjct: 292 YIDLCLPTYYLINYVEFFSATRKYDGRKYGHRIE--DVC-----------GPEVLRRIHM 338 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+Y+ +Y RA + R+LI+R+ E + VD+IL PT P LG+E Sbjct: 339 GSYISQKELSGKYYRRALQARSLIRREI-EGLLKDVDIILGPTVPKLPHRLGEELE---P 394 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 M DV TV N+AG+PA S+PA + +P+GLQL +P + + S Sbjct: 395 MEMYAYDVLTVIANLAGIPAASMPAGDVD-GVPVGLQLQAKPGDDGMILS 443 >gi|84489009|ref|YP_447241.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosphaera stadtmanae DSM 3091] gi|109891957|sp|Q2NHN5|GATA_METST RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|84372328|gb|ABC56598.1| GatA [Methanosphaera stadtmanae DSM 3091] Length = 455 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 170/478 (35%), Positives = 248/478 (51%), Gaps = 26/478 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E + ++ ++I+A E ++ IE N +NA++++ +KAR AE+ DKRI N Sbjct: 1 MKVIEKVEAIKQQEITATENLEQMYSTIEEKNDDINAFVQLDIEKARKTAEDIDKRIKNN 60 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+ IGIK + A S L + Y +TV ++ D V++G NMD Sbjct: 61 EETGKLAGLVIGIKSNINVEDFIISAASPTLKNYYGSYNATVINRILDEDGVIIGLTNMD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA GSS ETS YGP +P PGGSSGGS+AA+A +C ++G+DTGGSIR Sbjct: 121 EFAAGSSTETSMYGPTNNP-----KAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G +G KPTYG SR G++ A SLDQ G ++L I GYD D T Sbjct: 176 NPASHCGVMGFKPTYGMVSRQGLLDLAMSLDQIGPFANDTTGIGLMLNVICGYDPYDTTT 235 Query: 246 VNLPVPDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +N D+ + + +++G T+G+ KE+ +D I + I + GA+I E+S Sbjct: 236 INKQPEDFLKDTTNSTLEGQTIGVVKEF-MDITDDKITSQINKSIDDMTSLGAEIKELSF 294 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 LP YY+I+ E S +YDG +YG R+E G EV RI Sbjct: 295 EDINLGLPTYYLINYVEFFSATRKYDGRKYGERIEEV-------------CGAEVARRIE 341 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 IG+Y+ +Y +A + R+LI+ +F E VDVI PT P +G+E Sbjct: 342 IGSYISQKEFSGKYYNKALQARSLIRNEFNELLND-VDVIAGPTVPKLPHKIGEE---IE 397 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +M DV TV N+ G+PA S+ + L + +P+GLQL +P + + S +E Sbjct: 398 TMDMYAYDVLTVLANITGIPASSMNSGLVD-NIPVGLQLQAKPEDDHKILSTMSALEN 454 >gi|296819365|ref|XP_002849836.1| DNA polymerase IV [Arthroderma otae CBS 113480] gi|238840289|gb|EEQ29951.1| DNA polymerase IV [Arthroderma otae CBS 113480] Length = 512 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 167/498 (33%), Positives = 268/498 (53%), Gaps = 65/498 (13%) Query: 41 MNAYIEVVAQKA--RAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILD 97 +NA+I + + R + +D R +G ++G IG+KD T + T S IL Sbjct: 20 LNAFITPLERSTSWRDRVQAADSRRDDGTTISPMDGKLIGVKDNICTNELRTTCGSAILQ 79 Query: 98 GFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET----------SYYGPVISPWRS 147 F + +TV + L D GA++ GK N+DEF MG ++ SY+G V R+ Sbjct: 80 EFTSPFNATVVELLEDAGAIVAGKTNLDEFGMGGHSDANLPLRSHSIHSYFGSV----RN 135 Query: 148 MDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 + +++ G S G SA C A++GTDTGGS+R PA++TG G KP+YG SR Sbjct: 136 SGTAEEYCSAGGSSGGSAVAVATGQCHAALGTDTGGSVRLPAAYTGIFGFKPSYGLISRW 195 Query: 207 GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP----VPDYERALDQSIQ 262 G++++A SLD GI D++ + + YD D T ++ + D + + + Sbjct: 196 GVVAYANSLDTVGIFG---TDTSTIRNVVNRYDNRDPTSISPTTRSRILDTVKKVSREKN 252 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 + +G+P EY + LS + WQ+ + L+ G I +SLP T+ AL AYY+++PAEA Sbjct: 253 RLRIGVPLEYNIHELSSDVRTAWQRTLQHLQSHGHIIHPVSLPATKQALSAYYVLAPAEA 312 Query: 323 SSNLARYDGVRYGLR-VEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 SSNL++YDGVRYG R ++ D +Y NTR +GFG EV+ RI++GT LS+ D+++ Sbjct: 313 SSNLSKYDGVRYGTRDIDFADNAGDYLYSNTRGMGFGAEVRRRILLGTLSLSADKIDNYF 372 Query: 380 LRARKIRTLIKRDFTEAF---------------------------EQGVDVILTPTTPTS 412 ++A+K+R L++ DF F + VD+++ PT P++ Sbjct: 373 IQAQKVRRLVQSDFNSVFRLRHPLIHTPSTVSNQQDASSNKDIETDTKVDILVCPTAPST 432 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP--------LGLQLI 464 + EN+S + + NDVFTV ++AGLP++SVP + + ++P G+Q+I Sbjct: 433 PPTIKVLENSSPTEAYT-NDVFTVPSSLAGLPSLSVPVSF-QSELPGRPSLIDSAGIQVI 490 Query: 465 GQPFREETLFSVGQIIEK 482 GQ + + VG+I+E Sbjct: 491 GQFGDDNMVLDVGEILEN 508 >gi|169826340|ref|YP_001696498.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lysinibacillus sphaericus C3-41] gi|168990828|gb|ACA38368.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lysinibacillus sphaericus C3-41] Length = 475 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 179/485 (36%), Positives = 271/485 (55%), Gaps = 34/485 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+ +V E L+SK +S VEL + + E S ++NAY+ ++A + A + ++ Sbjct: 6 TDLHLKSVEELAPLLQSKALSPVELTKAILDFAEESQPKINAYMAFYREEALSQANKIEQ 65 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I+ G + + GIP+ +KD K T S I F +Y++TV +KL D G + G Sbjct: 66 EILQGQYKGMYHGIPMALKDNLYFKDKITTMSSKIHKDFVSNYDATVVEKLRDAGVIFTG 125 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E+A G +N +YGPV +PW DK PGGSSGGS AAVA AS+GTDT Sbjct: 126 KLSMHEYAWGITNNNPHYGPVRNPW----DLDKI-PGGSSGGSGAAVAAGASVASLGTDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P+S G VG+KPT+GR S+ G A SLD G +T+TV+D+A LL+ I+G+D Sbjct: 181 AGSIRIPSSACGIVGLKPTHGRVSKYGCYPLAWSLDHIGPMTKTVKDAAGLLEVISGFDH 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D TC+++P +Y + L + + + +GI +EY + I+K + I L D GAK+ Sbjct: 241 RDPTCIDVPTDNYVQQLSGNSKDLVIGINEEYFFKDVDADIEKAVRASIQSLVDQGAKVE 300 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + +P QYA A + S +EA++ + D+ R FG +++ Sbjct: 301 GVRIPSLQYAEWAELVTSLSEAAA-------------IHHSDL-----QKRPQDFGDDIR 342 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +G L S YL+A+++R IK++F E F Q VDV++TPT P A +G + Sbjct: 343 LLFELGE--LPSAV---DYLQAQQVRRQIKQEFNEIFNQ-VDVLITPTLPVVANTIGDDF 396 Query: 420 -ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N + I N + FT N+ GLPA+SVP + +P+GLQ+IG F+E + +VG Sbjct: 397 AELNGKKVDLIDNIIRFTGPSNLTGLPALSVPCGF-KGNLPIGLQIIGPAFKEGRILNVG 455 Query: 478 QIIEK 482 IE+ Sbjct: 456 YAIEQ 460 >gi|145615946|ref|XP_001415044.1| hypothetical protein MGG_13483 [Magnaporthe oryzae 70-15] gi|145009734|gb|EDJ94390.1| hypothetical protein MGG_13483 [Magnaporthe oryzae 70-15] Length = 517 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 166/461 (36%), Positives = 236/461 (51%), Gaps = 71/461 (15%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD AT+ T S+IL + YE+TV ++L GA ++G N+DEF MG+ + Sbjct: 55 VAVKDNIATQAHPTTCASNILRDYTSPYEATVVRQLRRRGARVVGTTNLDEFGMGTHSTH 114 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S +GPV SP + VA +GTDTGGS+R PA++ G VG Sbjct: 115 SAHGPVASPAGRSAGGSSGGSAVAVAAGEVEVA-------LGTDTGGSVRLPAAYNGVVG 167 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTV---RDSAILLKAIAGYDECDAT-------- 244 KP+YG SR G++ +A SLD G++ R+V RD + A +D+ D T Sbjct: 168 FKPSYGMLSRYGVVPYANSLDTVGLLARSVERIRDLVVGEGLWAQHDDKDPTSLSAAARL 227 Query: 245 -CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 C + A +G+T GIP EY + L P I + W++ + L+ GA +V +S Sbjct: 228 RCASGRTGYKGEAAKVGWEGLTFGIPLEYNIFELDPLIREAWEEVAALLQSLGANVVPVS 287 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYG-----LRVEGKDILEMYENTRSIGFGQE 358 LP T+ AL AYY+++PAEASSNLA+YDGVRYG EG +Y R GFG E Sbjct: 288 LPTTRQALSAYYVLAPAEASSNLAKYDGVRYGNPGPESENEGG---VLYSAARGAGFGDE 344 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF------------EQG------ 400 VK RI++G Y LSS D+++++A+K+R L++ DF F E+G Sbjct: 345 VKRRILLGAYSLSSEAMDNYFVQAQKVRRLVRGDFDRVFLLDNPLVDKEPTEEGFGEEAE 404 Query: 401 ---------------------VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 VD IL+PT PT A P E + S+ NDVFTV + Sbjct: 405 QADLADLHEDVPLLNKRGPARVDFILSPTAPTPA-PTLDEALSQTSLDSATNDVFTVPAS 463 Query: 440 MAGLPAISVPAALCEKKMPL----GLQLIGQPFREETLFSV 476 +AGLPAIS+P + E + G+Q+IGQ + + L V Sbjct: 464 LAGLPAISLPVDMKEDVHGVGRFAGIQIIGQYWDDARLLDV 504 >gi|110005469|emb|CAK99791.1| putative glutamyl-trna(gln) amidotransferase subunit a transmembrane protein [Spiroplasma citri] Length = 491 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 167/495 (33%), Positives = 253/495 (51%), Gaps = 31/495 (6%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + ++ E L SK I+ ++V + +NA + + +A A A + D + Sbjct: 1 MTYYSIKELHHLLVSKKINPSQIVKDAFTNLAKY-QVLNATVTELEVEATALAAKLDHLV 59 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + + L +P KD FATKGI T A S IL+ F P+YESTVT L +N +++LGK Sbjct: 60 VPKNNY-LFALPYFAKDNFATKGIKTTASSKILENFIPNYESTVTNILKENNSILLGKTA 118 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +DE MG + G V++PW T GGSS GS A VA + ++GTDTG S Sbjct: 119 LDELGMGGHGLYALTGDVLNPWDLTRIT-----GGSSSGSVALVAAGVAPFALGTDTGDS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R+PA + G VG KPTYG SR G+ +APSLD G TRTV DSAI+ +A D DA Sbjct: 174 VRKPAGYCGCVGFKPTYGLISRYGVFPYAPSLDTVGYFTRTVEDSAIVFDYLAQEDRKDA 233 Query: 244 TCVNLPVPDYERALDQS---------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 T + DY + L ++ +P+E R + D ++Q L Sbjct: 234 TSLKSKEQDYFKNLSLEKVKKQKFAYLKNAHSILPEEIRNHF-----DHLYEQ----LTA 284 Query: 295 AGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 G + I P + +P Y +IS AEA S+ + DG+ +G RV G E+ N+R+ Sbjct: 285 RGISVTAIDFPEDLLKALMPVYMVISFAEAVSSHSMLDGINFGTRVNGDTYREVMMNSRT 344 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG VK R +IG+Y L+ +L+A+++R LI F + D++L P T Sbjct: 345 NGFGHVVKRRYVIGSYTLTKNNQTLLFLKAKRVRRLIVNALNNVFIK-YDILLLPAASTV 403 Query: 413 AFPLGKEENNSGSMGHI--YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 A + + + + Y D V N+ G P+++VP A + KMP+G+ + PF + Sbjct: 404 APKITTIKGQILTEAELENYVDDLLVLGNLMGNPSLTVPLAFVD-KMPIGINVNAAPFAD 462 Query: 471 ETLFSVGQIIEKEAG 485 + +F+ +IE+ AG Sbjct: 463 QKVFNASLLIEEIAG 477 >gi|212696139|ref|ZP_03304267.1| hypothetical protein ANHYDRO_00675 [Anaerococcus hydrogenalis DSM 7454] gi|212676768|gb|EEB36375.1| hypothetical protein ANHYDRO_00675 [Anaerococcus hydrogenalis DSM 7454] Length = 469 Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 160/479 (33%), Positives = 261/479 (54%), Gaps = 16/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + E+ ++ ++ +IS + + ++ I+N Q NAYI + + + A+ D+++ N Sbjct: 1 MDIKETINKFKNNEISVYDNTKNVLEKIKND--QYNAYISINEKDSLERAKYLDEKLKNK 58 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GI + +KD + K + S IL+ F P + + V + L A+++ K NMD Sbjct: 59 EELGSLFGIAVSVKDNISYKNMKMTCASKILEDFNPVFNAKVVENLLKEDAIIIAKTNMD 118 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETSY+GP+ +P + PGGSS GS+ +VA S+GTDTGGS+R Sbjct: 119 EFAMGGSGETSYFGPIKNPL-----DENLIPGGSSSGSAVSVAKGDVLVSLGTDTGGSVR 173 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS+ +G KPTY SR G++S A SLDQ + + V+D + D+ D T Sbjct: 174 QPASYCNIIGYKPTYSLMSRSGVVSMANSLDQVSLFAKNVKDLRTIANTCQSPDKFDMTS 233 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 E D S + + V I E + L ++ ++ I LK+ GA+I+ I L Sbjct: 234 CLEKYEYKEENFDFSGKKIAV-IKNENNIYNLDKEVEDDYKHAIEILKELGAEIIPIDLK 292 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +++YA Y ++ +E SSNL+R+DG+R+G + E K++ E++ RS GFG+ V+ RI Sbjct: 293 YSKYANEVYNVVMSSEVSSNLSRFDGIRFGHQTDEYKNVEELFIKNRSEGFGENVQRRIA 352 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT LSS Y + K+RTLI +F E F + D+++TPTT LG ++ Sbjct: 353 LGTMYLSSEDDQRIYKQGLKLRTLIVEEFKEIF-KNYDLLITPTTVDLPSKLGIYVDD-- 409 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +D+F V VN+ G +S+P K + +Q+IG F++ + + + E++ Sbjct: 410 PLKDFTSDIFNVCVNLTGSCGVSIPV---RKGISGSIQIIGDRFKDNDIINACETFERK 465 >gi|255073215|ref|XP_002500282.1| predicted protein [Micromonas sp. RCC299] gi|226515544|gb|ACO61540.1| predicted protein [Micromonas sp. RCC299] Length = 452 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 167/429 (38%), Positives = 235/429 (54%), Gaps = 49/429 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+PI +KD F +G T A S +L G+ P ESTVT++L GAV++GK NMDEF MG Sbjct: 19 LDGVPIAVKDNFCVRGAPTTAGSRMLRGYEPPLESTVTRRLRAAGAVIVGKCNMDEFGMG 78 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTP--------------GGSSGGSSAAVAGFLCAASI 176 S+N S G I+PW + + + P GGSSGGS+ AVA ++ Sbjct: 79 SANVNSASGACINPWVARPARREPGPDGPVDDHRLGPRTAGGSSGGSACAVASGAAILAV 138 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+DTGGS+R PA++ G VG+KP+YG SR G++ + SLD G + R+V D+A+ + Sbjct: 139 GSDTGGSVRLPAAYCGVVGMKPSYGSVSRWGLVPYCSSLDTPGFLARSVSDAAVAMHVTH 198 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G D D+T + +P + G VG+P EY + + + W + S L+ G Sbjct: 199 GLDPLDSTTTRVGMP---------LAGWRVGVPVEYDVAECTAEVRAAWSETCSLLERLG 249 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKD--ILEMYENTRSI 353 A + +SLP T AL AYY+++PAE +SNLARYDG G+ V GKD E RS Sbjct: 250 AAVTRVSLPSTAAALAAYYVLAPAECASNLARYDG---GVFVPSGKDGGFHESTARARSH 306 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA---FEQGVDVILTPTTP 410 GFG EV+ R+++GTYVL + + YL + + A GVD++LTPT P Sbjct: 307 GFGPEVQRRVLVGTYVLGTD-VTARYLDRARRVRRVVAADGHARGVSHTGVDLLLTPTAP 365 Query: 411 TSA--------------FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EK 455 T A F ++S + G+ D TV ++AGLPAIS+P L E Sbjct: 366 TVAPLLYGPGGVGEGGGFDHQSGMDDSATAGYA-ADAMTVPASLAGLPAISLPVGLGFES 424 Query: 456 KMPLGLQLI 464 MP+G+QLI Sbjct: 425 GMPVGMQLI 433 >gi|325846610|ref|ZP_08169525.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481368|gb|EGC84409.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 469 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 160/479 (33%), Positives = 259/479 (54%), Gaps = 16/479 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + E+ ++ ++ +IS E + + I+N Q NAYI + + + A+ D+++ N Sbjct: 1 MDIKETINKFKNNEISVYENTKNILDKIKND--QYNAYISINEKDSLERAKYLDEKLKNK 58 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GI + +KD + K + S +L+ F P + + V + L A+++ K NMD Sbjct: 59 EELGSLFGIAVSVKDNISYKNMKMTCASKMLEDFNPVFNAKVVENLLKEDAIIIAKTNMD 118 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMG S ETSY+GP+ +P + PGGSS GS+ +VA S+GTDTGGS+R Sbjct: 119 EFAMGGSGETSYFGPIKNPL-----DENLIPGGSSSGSAVSVAKGDVLVSLGTDTGGSVR 173 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS+ +G KPTY SR G++S A SLDQ + V+D + D+ D T Sbjct: 174 QPASYCNIIGYKPTYSLMSRSGVVSMANSLDQVSLFANNVKDLRTIANTCQSPDKFDMTS 233 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 E D S + + V I E + L ++ ++ I LK+ GA+I+ I L Sbjct: 234 CLEKYEYKEENFDFSGKKIAV-IKNESNIYNLDKEVEDDYKHAIEILKEMGAEIIPIDLK 292 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIM 364 +++YA Y ++ +E SSNL+R+DG+R+G + E K++ E++ RS GFG+ V+ RI Sbjct: 293 YSKYANEVYNVVMSSEVSSNLSRFDGIRFGHQTDEYKNVEELFIKNRSEGFGENVQRRIA 352 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GT LSS Y + K+RTLI +F E F + D+++TPTT LG ++ Sbjct: 353 LGTMYLSSEDDQRIYKQGLKLRTLIVEEFKEIF-KNYDLLITPTTVDLPSKLGIYVDD-- 409 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +D+F V VN+ G +S+P K + +Q+IG F++ + + + E++ Sbjct: 410 PLKDFTSDIFNVCVNLTGSCGVSIPV---RKGISGSIQIIGDRFKDNDIINACETFERK 465 >gi|85074865|ref|XP_965800.1| hypothetical protein NCU00660 [Neurospora crassa OR74A] gi|28927613|gb|EAA36564.1| hypothetical protein NCU00660 [Neurospora crassa OR74A] Length = 526 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 173/487 (35%), Positives = 249/487 (51%), Gaps = 86/487 (17%) Query: 76 IGIKDCFATKG--------IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + +KD AT + T S+ L +R +E+T+ +L GA+++GK N+DEF Sbjct: 36 LAVKDNIATVSPNSEEETPLTTTCGSNFLANYRSPFEATIVSQLRSRGALLVGKTNLDEF 95 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 MGS + + +G V K + GGSSGGS+ AVA ++GTDTGGS+R P Sbjct: 96 GMGSHSVHTAFGAVAQEGEHEQQAVKHSAGGSSGGSAVAVATGEADIALGTDTGGSVRLP 155 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL-----KAIAG----Y 238 A +TG VG KP+YG SR G++ +A SLD G++ + VR A L+ K G + Sbjct: 156 AGYTGVVGFKPSYGMLSRYGVVPYANSLDTVGLLAKEVRPIAELILGGADKVTRGLWAEH 215 Query: 239 DECDAT---------------CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK 283 D D T C P+P L + + G+P EY + LSP+I Sbjct: 216 DPLDPTSLSHGARRRCASQRDCYTGPLPKDPYPL----KNLKFGLPLEYNITELSPSIRH 271 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 +W + L+ GA++V +SLP T++AL AYY+I+PAEASSNLA+YDG+RYG R Sbjct: 272 SWSAAAAKLQSLGARLVPVSLPSTRHALSAYYVIAPAEASSNLAKYDGIRYGTRFTSPTE 331 Query: 344 LE-----------------MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 + +Y R+ GFG EVK RI++G Y LSS D+++L+A+K+R Sbjct: 332 SDAAISEGPEGREEEEEGILYARARTAGFGDEVKRRILLGAYTLSSAAMDNYFLKAQKVR 391 Query: 387 TLIKRDFTEAFE-----------------------------QGVDVILTPTTPTSAFPLG 417 L++RDF F VD +L PT PT+A L Sbjct: 392 RLVRRDFNRVFALPNPLLDKPERFELSELPETVGLEDKWGPTEVDFLLCPTAPTTAPRLD 451 Query: 418 K--EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP--LGLQLIGQPFREETL 473 + E + NDVFTV ++AGLPAISVP + +K+ GLQLIGQ + + L Sbjct: 452 EVLSEEEKDPVSAYMNDVFTVPASLAGLPAISVPMRVEDKEGAGMAGLQLIGQYWDDARL 511 Query: 474 FSVGQII 480 +V + + Sbjct: 512 LAVAETV 518 >gi|224543220|ref|ZP_03683759.1| hypothetical protein CATMIT_02420 [Catenibacterium mitsuokai DSM 15897] gi|224523853|gb|EEF92958.1| hypothetical protein CATMIT_02420 [Catenibacterium mitsuokai DSM 15897] Length = 480 Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 158/485 (32%), Positives = 261/485 (53%), Gaps = 15/485 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +S ++ E + + ++NA++ + ++A A E + D Sbjct: 6 IEELHELFKSGELDVKEYYKELFEEAKKQQERLNAFVTITEEEAYKAIEAP----MTDDL 61 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L IP +KD + TKGI T A S +L + P + + V L +G ++GK +MDE A Sbjct: 62 --LSHIPYVLKDNYNTKGIKTTASSKMLADYVPVFNAHVVDLLNQHGVGLVGKASMDELA 119 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MG +N+++ GPV +PW + + GGSSGGS+A VA L ++G+DTG SIR+PA Sbjct: 120 MGGTNKSALTGPVHNPWDT-----RRISGGSSGGSAALVASGLIPFALGSDTGDSIRKPA 174 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 F G VG KPT+GR SR G+I +A SLD G TR VRD AI+ +A+AG D D T N Sbjct: 175 GFCGIVGFKPTWGRISRYGVIPYASSLDHVGAFTRNVRDMAIVTEALAGRDNRDMTSSNR 234 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI--VEISLPH 306 VP Y L I + +G+ + + + KT++ + LK GA + VE+ Sbjct: 235 EVPHYLENLTTDISDLKIGVLTTVSNEVRNEEVKKTFENVVETLKSLGATVEDVEMDKKL 294 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + LP Y II+ +EA+SN + DGV+YG R +G ++ N+R+ GFG +K R ++G Sbjct: 295 MKTLLPTYTIIANSEATSNHSCLDGVKYGDRQQGDTPDDVMINSRTDGFGDHIKRRFILG 354 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 L++ + + +A+++R L+ + + +E D+I+ P A + + + S Sbjct: 355 NLALATENQEKMFRKAQRVRRLVVDELNKIYEN-YDIIIAPNGGGVAPLIDEAAEDYLSD 413 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +I + + N AG P+IS+P+ + MP+ + + G+ F E+T+ +V +E+ G+ Sbjct: 414 EYIILENWLCLANFAGTPSISIPSGFVD-NMPVAVNISGRIFEEQTVLNVAYALEEALGF 472 Query: 487 FRPHK 491 +K Sbjct: 473 KNQYK 477 >gi|68468052|ref|XP_721865.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida albicans SC5314] gi|46443807|gb|EAL03086.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida albicans SC5314] Length = 450 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 164/413 (39%), Positives = 232/413 (56%), Gaps = 32/413 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G +KD AT +T A S IL + + + + L NG+ ++GK N+DEF MG Sbjct: 39 LSGTTYIVKDNIATSHGYTTAASKILSNYESPFNAMIIDLLSSNGSKLIGKSNLDEFGMG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+N SY+ V +P+ D+T PGGSSGGS+A+VAG +C+ SIGTDTGGS+R PAS+ Sbjct: 99 SANYNSYFNKVTNPY---DNTK--VPGGSSGGSAASVAGKMCSFSIGTDTGGSVRLPASY 153 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KPTYGR SR G+I +A +LD GII V + + YD+ D TC LP Sbjct: 154 CNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDPTC--LPE 211 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 ++ + +T+G+P E+ L LS + ++W+ +S + G + IS+ + A Sbjct: 212 EVRQKIPTTKKETLTIGVPHEFVLKELSADVRESWEYALSKICKLGHLVKPISIKTIKKA 271 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKHRIMIGTY 368 LP+YY ++ AEA+SNL+RYDG+RYG +E+ RS GFG EV+ RI++G Y Sbjct: 272 LPSYYTLATAEAASNLSRYDGIRYGYNTNESVNSPIELIATNRSNGFGSEVQRRILLGNY 331 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG------------VDVILTPTTPTSAFPL 416 LSS D HYLRA +IR + +F+ F VD+I+ PT+ TS P Sbjct: 332 TLSSDSGD-HYLRATQIREELCAEFSSIFNNSHVLLQDEQSSDKVDLIMAPTS-TSTAPT 389 Query: 417 GKE---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E N + NDV TV ++AG+PAISVP +G+QL+GQ Sbjct: 390 WDEFVSANEKNFLNSYVNDVLTVPASLAGIPAISVPVN------GIGIQLMGQ 436 >gi|261188891|ref|XP_002620858.1| glutamyl-tRNA amidotransferase [Ajellomyces dermatitidis SLH14081] gi|239591862|gb|EEQ74443.1| glutamyl-tRNA amidotransferase [Ajellomyces dermatitidis SLH14081] Length = 548 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 181/512 (35%), Positives = 262/512 (51%), Gaps = 87/512 (16%) Query: 53 RAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 R ++D R G + L+G + IKD T+ + T S ILD + + +TV + L Sbjct: 36 RDRVRDADVRRERGAVKSPLDGKLVAIKDNICTRDMPTTCASRILDSYTSPFNATVVESL 95 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 GA++ GK N+DEF MGS + S++GPV + + + +PGGSSGGS+ AVA Sbjct: 96 EKAGAILAGKTNLDEFGMGSHSMNSHFGPVSNVTEA--EREPISPGGSSGGSAIAVATGQ 153 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGII---TRTVRDS 228 C A++GTDTGGS+R PA++TGTVG KP+YG SR G++++A SLD G++ T+R+ Sbjct: 154 CYAALGTDTGGSVRLPAAYTGTVGFKPSYGLVSRFGVVAYANSLDTVGVLGSNISTIREV 213 Query: 229 AIL--------LKAIAGY---DECDATCVNLPVPDYERALD---------------QSIQ 262 + LK + +E A +N P P L S+ Sbjct: 214 FSMSNPPQYPQLKPNHHHIPPNERTAETINHPDPLDPTNLPPTTRTRLTTAFTTRPSSLP 273 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 +GIP EY + LSP + WQ I+ L G I +SLP T+ AL AYY+++PAEA Sbjct: 274 RFRIGIPTEYNIHELSPAVRTAWQLSITHLHQLGHSIHPVSLPATKQALAAYYVLAPAEA 333 Query: 323 SSNLARYDGVRYGLR-VEGKDILE----MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 SSNLARYDGVRYG R D +Y TR GFG EV+ R+++G + LS+ D+ Sbjct: 334 SSNLARYDGVRYGTRDTSAPDNAGPGGYLYARTRGEGFGSEVQRRVLLGAFSLSADAIDN 393 Query: 378 HYLRARKIRTLIKRDFTEAFE----------------------------QGVDVILTPTT 409 ++L+A+++R L++ DF F GVDV++ PT Sbjct: 394 YFLQAQRVRRLVQGDFERVFRVGNPLLPLKANTKADAVDEGGEGCLQEGVGVDVLVVPTA 453 Query: 410 PTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAAL---------------- 452 PT P E S Y NDVFTV ++AGLPA+SVP + Sbjct: 454 PT--LPPTIESLKRASAVETYMNDVFTVPASLAGLPALSVPVPVPVQARGLLRDSDGDGD 511 Query: 453 ---CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 E +G+Q+IGQ ++ + VG+++E Sbjct: 512 GDGDEAFGSVGIQVIGQFGDDDMVLHVGEMLE 543 >gi|255071275|ref|XP_002507719.1| glutamyl-tRNA amidotransferase, subunitA [Micromonas sp. RCC299] gi|226522994|gb|ACO68977.1| glutamyl-tRNA amidotransferase, subunitA [Micromonas sp. RCC299] Length = 525 Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 166/479 (34%), Positives = 265/479 (55%), Gaps = 33/479 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R +A ++ +Y+ I ++ ++ ++I A A A A D++I G D L G+ Sbjct: 58 IREGRTTAQDVTRAYLAKIRQTDEKVGSFITTQADNAIAQAISIDEKICRGEDPGILTGV 117 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD + T A S +L+ + ++S V + G ++LGK N+DEF MGS+ E Sbjct: 118 AFAIKDNICSSDSFTTAGSRLLEVHQSPHDSLVVSAIKAEGGIILGKTNLDEFGMGSTTE 177 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G +PW + PGGSSGGS++AVA CAA++G+DTGGSIRQPASF G V Sbjct: 178 NSAFGVTSNPWDM-----RRIPGGSSGGSASAVALKQCAAALGSDTGGSIRQPASFCGVV 232 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG-YDECDATCVNLPVPDY 253 G+KPTYG SR G++++A S D G +T +V DSAI+L A+ +++ D+T + + Sbjct: 233 GLKPTYGLLSRHGLVAYASSFDTIGPVTTSVEDSAIVLTALCSRHNQLDSTLHHTNSSRF 292 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI--------SWLKDAGAKIVEISLP 305 L ++++ YR + TI Q + + ++ GA + +S P Sbjct: 293 HDHL-KNLEHFASKPLSGYRFAIIKETIGLGVQHDVVQRVLEAATKIERLGAAVDFVSCP 351 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 LPAYYI++ +EASSNL+RYD +R G GK +R GFG EVK RI++ Sbjct: 352 TFHLGLPAYYILALSEASSNLSRYDCIRLG----GK-------TSRDEGFGAEVKRRILM 400 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G++ LS+ D++Y RA++++ +++ + ++ D + P P+ A+ ++ N+ + Sbjct: 401 GSFALSAGHSDAYYERAQEVQRMVEAELACKLQE-YDAFILPAAPSPAYLKSEKMNDPLA 459 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKK---MPLGLQLIGQPFREETLFSVGQIIE 481 M D+ TV VN++GLPAI V E +P+GLQ++G+PFRE L + E Sbjct: 460 M--YSGDMMTVNVNLSGLPAIVVRGGHVENDGTLLPVGLQIVGRPFRERALLEIAHAYE 516 >gi|238882845|gb|EEQ46483.1| conserved hypothetical protein [Candida albicans WO-1] Length = 450 Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 164/413 (39%), Positives = 232/413 (56%), Gaps = 32/413 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G +KD AT +T A S IL + + +T+ L NG+ ++GK N+DEF MG Sbjct: 39 LSGTTYIVKDNIATSHGYTTAASKILSNYESPFNATIIDLLSSNGSKLIGKSNLDEFGMG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+N SY+ V +P+ D+T PGGSSGGS+A+VAG +C+ SIGTDTGGS+R PAS+ Sbjct: 99 SANYNSYFNKVTNPY---DNTK--VPGGSSGGSAASVAGKMCSFSIGTDTGGSVRLPASY 153 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KPTYGR SR G+I +A +LD GII V + + YD+ D TC LP Sbjct: 154 CNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDPTC--LPE 211 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 ++ + +T+G+P E+ L LS + ++W+ +S + G + IS+ + A Sbjct: 212 EVRQKIPTTKKETLTIGVPHEFVLKELSADVRESWEYALSKICKLGHLVKPISIKTIKKA 271 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKHRIMIGTY 368 LP+YY ++ AEA+SNL+RYD +RYG +E+ RS GFG EV+ RI++G Y Sbjct: 272 LPSYYTLATAEAASNLSRYDSIRYGYNTNESVNSPIELIATNRSDGFGSEVQRRILLGNY 331 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG------------VDVILTPTTPTSAFPL 416 LSS D HYLRA +IR + +F+ F VD+I+ PT+ TS P Sbjct: 332 TLSSDSGD-HYLRATQIREELCAEFSSIFNNSHVLLQDEQSSDKVDLIMAPTS-TSTAPT 389 Query: 417 GKE---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E N + NDV TV ++AG+PAISVP +G+QL+GQ Sbjct: 390 WDEFVSANEKNFLNSYVNDVLTVPASLAGIPAISVPVN------GIGIQLMGQ 436 >gi|154303802|ref|XP_001552307.1| hypothetical protein BC1G_08785 [Botryotinia fuckeliana B05.10] gi|150854369|gb|EDN29561.1| hypothetical protein BC1G_08785 [Botryotinia fuckeliana B05.10] Length = 607 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 172/515 (33%), Positives = 269/515 (52%), Gaps = 75/515 (14%) Query: 25 ELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 EL S++QA E + + NA+I K + + DK+++ +R + +KD Sbjct: 14 ELFRSHLQAKEATVHPHQDTNAFIS----KPKLTSPADDKKLLPRVSR-----AVAVKDN 64 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 AT T S IL+ ++ ++++V + + + GK NMDEF MGS + S++G V Sbjct: 65 IATISETTTCASRILETYQSPFDASVVEDVKAGTGHVAGKTNMDEFGMGSHSLNSHFGAV 124 Query: 142 I--SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 P+R GSSGGS+ AVA ++GTDTGGS+R PA++TGT G KP+ Sbjct: 125 RHHKPFRLRSVG------GSSGGSAMAVATSTTNMALGTDTGGSVRLPAAYTGTAGFKPS 178 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YG SR G++ +A SLD G+I R+ + ++ +D D T +L R +Q Sbjct: 179 YGIVSRFGVVPYANSLDTVGLIARSASRIHEIFPRLSSHDPRDPT--SLKPSSRSRIKEQ 236 Query: 260 S-----------------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 ++ + +G+P EY + L + WQ+ + L+ G IV I Sbjct: 237 RMDFFGKTKISATHDPFYLRELKIGVPIEYNISELDLEVSWAWQRMLKLLQREGCTIVPI 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQEVK 360 SLP+T++AL AYY+++ AEASSNL++YDGVRYG R + D +Y TR GFG EVK Sbjct: 297 SLPNTKHALSAYYVLAAAEASSNLSKYDGVRYGTRDQSSDGAGDVLYSGTRGAGFGDEVK 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-----------------EQG--- 400 RI++G+Y LSS D+++++A+K+R L++RDF F E+G Sbjct: 357 RRILLGSYSLSSDAIDNYFIQAQKVRRLVQRDFDRVFSMPNFLRPEEQFDLSDMEEGIAL 416 Query: 401 --------VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 VD+IL PT PT + + + NDVFTV ++AG+P+IS+P L Sbjct: 417 EDKLGPAEVDIILCPTAPTLSPIVQDITERQTPVDAYMNDVFTVPASLAGIPSISIPCKL 476 Query: 453 ----CEKKMP--LGLQLIGQPFREETLFSVGQIIE 481 ++ +P +G+Q++GQ + V ++E Sbjct: 477 PFKFSKQSVPSTVGIQIMGQHSDDGRALQVASMLE 511 >gi|20093678|ref|NP_613525.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanopyrus kandleri AV19] gi|19886557|gb|AAM01455.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Methanopyrus kandleri AV19] Length = 455 Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 179/485 (36%), Positives = 257/485 (52%), Gaps = 40/485 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E+ + S + E + Y++ I+ N +NA I + A EE G Sbjct: 2 LREAVKDIESGHVDPSERIHEYLEKIDRENPDINALIYING----GAPEEV------GSE 51 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+ I +K +G+ S L+G+R +++TV +++ + GA ++G NMDEFA Sbjct: 52 GPLAGVAIAVKANINVEGMPCDCASKTLEGYRAPFDATVVRRIKEAGAAVIGIANMDEFA 111 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 GSS ETS +GP +P PGGSS GS+AAVA LC A++G+DTGGSIR PA Sbjct: 112 AGSSGETSCHGPTDNP-----RCPGRIPGGSSSGSAAAVAAGLCDAALGSDTGGSIRNPA 166 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE-CDATCVN 247 S G VG KPTYG R G+I A SLDQ G ITRTV D+A+LL+ IAG E + T N Sbjct: 167 SHCGVVGFKPTYGLVPRQGLIDLAMSLDQIGPITRTVEDAALLLEVIAGPGEDVEGTVRN 226 Query: 248 LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 VP + LD + ++GM +G+ +E+ L+ P I + ++ L+ AGA + E+SL Sbjct: 227 AEVPRFSELLDPEEVEGMRIGLVREF-LEVSEPEIAEVAKEAARALERAGATVEEVSLGR 285 Query: 307 --TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 ALP YY+I+ E S R+DG RYG R+E G+EV RI+ Sbjct: 286 KLVDVALPTYYVINYVEFFSATRRFDGRRYGRRIEHV-------------CGKEVLRRIV 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G + +Y RA + RT I+R EA E G D +L PT P +G+E + Sbjct: 333 AGAAISRQEVRGQYYERALRARTWIRRRLLEALE-GYDALLGPTVPKPPHRIGEELSVRE 391 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIE 481 G+ DV TV N+AG PA SVP ++P G+Q+I +P+ + T +V +E Sbjct: 392 MYGY---DVLTVIPNLAGCPAGSVPFDTINVDGDRVPCGVQVIARPWEDLTALNVMAALE 448 Query: 482 KEAGY 486 + A + Sbjct: 449 RAASF 453 >gi|309777089|ref|ZP_07672055.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308915159|gb|EFP60933.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 473 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 161/476 (33%), Positives = 259/476 (54%), Gaps = 20/476 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +R R +D+ + + ++ + S ++NA + V K + S ++ DA + G Sbjct: 4 ERARKQDVES--RIQEALEKAKESQKRLNAVVTFVDPKEQLEHLAS----VDADA-PMYG 56 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI +KD TKGI T A S ILD + P Y + + KL GAV++ K +MDE MG +N Sbjct: 57 MPIVLKDNVNTKGIRTTASSRILDNYVPVYNAHIVDKLQAAGAVVIAKASMDELGMGGTN 116 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +Y GPV + W + GGSSGGS+A VA + +IGTDTG S+R+PA++ G Sbjct: 117 RNAYTGPVHNAW-----DESRISGGSSGGSAALVAAGIVPFAIGTDTGDSVRKPAAYQGI 171 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +G+KPTYGR SR GII +A SLD G +V+D+A L+ +AG D+ D T + V Y Sbjct: 172 IGMKPTYGRISRYGIIPYASSLDHVGYFATSVQDTATALEVLAGRDDRDMTSSHKEVEAY 231 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT--QYAL 311 L+ ++G + + + I + + L+ GA + + + + + Sbjct: 232 VANLNSDLRGKRIAVLDNVQEAVEDLQIRENLTALLKKLEARGAVVEHVRMDDKLMKALM 291 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 P YYII+ AEA++N + DG+R+G+R +G+ + ++ NTR+ GF V+ R +IG+Y L Sbjct: 292 PTYYIIANAEATANHSNLDGIRFGMREDGESVEDVMINTRTKGFCSYVRKRFVIGSYSLF 351 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS--GSMGHI 429 D + +A+K+R LI + G DV++ T A P G E +S G+ ++ Sbjct: 352 VENQDKIFRKAQKVRRLIVEELNRVL-AGYDVVIASAAGTIA-PHGSESTDSHLGADNNV 409 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + + N +G P+I+VP E MP+G+ + + F E+TLF++ IE+E G Sbjct: 410 AENHMVLG-NFSGYPSITVPTGFSE-GMPVGINMTAKAFDEQTLFNIALAIEEETG 463 >gi|68467733|ref|XP_722025.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida albicans SC5314] gi|46443972|gb|EAL03250.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida albicans SC5314] Length = 450 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 164/413 (39%), Positives = 231/413 (55%), Gaps = 32/413 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G +KD AT +T A S IL + + + + L NG+ ++GK N+DEF MG Sbjct: 39 LSGTTYIVKDNIATSHGYTTAASKILSNYESPFNAMIIDLLSSNGSKLIGKSNLDEFGMG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+N SY+ V +P+ D+T PGGSSGGS+A+VAG +C+ SIGTDTGGS+R PAS+ Sbjct: 99 SANYNSYFNKVTNPY---DNTK--VPGGSSGGSAASVAGKMCSFSIGTDTGGSVRLPASY 153 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KPTYGR SR G+I +A +LD GII V + + YD+ D TC LP Sbjct: 154 CNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDPTC--LPE 211 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 ++ + +T+G+P E+ L LS + ++W+ +S G + IS+ + A Sbjct: 212 EVRQKIPTTKKETLTIGVPHEFVLKELSADVRESWEYALSKTCKLGHLVKPISIKTIKKA 271 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKHRIMIGTY 368 LP+YY ++ AEA+SNL+RYDG+RYG +E+ RS GFG EV+ RI++G Y Sbjct: 272 LPSYYTLATAEAASNLSRYDGIRYGYNTNELVNSPIELIATNRSDGFGSEVQRRILLGNY 331 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG------------VDVILTPTTPTSAFPL 416 LSS D HYLRA +IR + +F+ F VD+I+ PT+ TS P Sbjct: 332 TLSSDSGD-HYLRATQIREELCAEFSSIFNNSHVLLQDEQSSDKVDLIMAPTS-TSTAPT 389 Query: 417 GKE---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E N + NDV TV ++AG+PAISVP +G+QL+GQ Sbjct: 390 WDEFVSANEKNFLNSYVNDVLTVPASLAGIPAISVPVN------GIGIQLMGQ 436 >gi|297588241|ref|ZP_06946884.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Finegoldia magna ATCC 53516] gi|297573614|gb|EFH92335.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Finegoldia magna ATCC 53516] Length = 463 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 164/478 (34%), Positives = 262/478 (54%), Gaps = 27/478 (5%) Query: 14 DRLRSKDISAVELVDSYIQAIEN---SNSQMNAYI----EVVAQKARAAAEESDKRIING 66 + LR+K + E + Y ++ S +N +I V Q+ E+++ N Sbjct: 3 ENLRNKFVENPESLRDYYNDLDKLIESKKDLNVFITYDKSFVDQQVEKLIEKANN---NE 59 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + + GI + +KD K + S +L+ + Y++TV +KL + V++GK+NMDE Sbjct: 60 NLGKMFGIAVSVKDNINVKDLKMTCGSKMLEDYVSIYDATVIKKLKEEDCVIVGKVNMDE 119 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FAMGSS+ETSY+GP +P + K PGGSS GS+A++ + S+GTDTGGS RQ Sbjct: 120 FAMGSSSETSYFGPTKNPVDT-----KLIPGGSSSGSAASIKAEMAVVSLGTDTGGSSRQ 174 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS VG PTYG SR G+ S A +LD+ GI++ +V D IAG+D+ D T + Sbjct: 175 PASSCNVVGFMPTYGSISRFGVQSMANTLDEVGILSNSVEDIMDTYNVIAGHDDNDMTTI 234 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 V ++ D + + V K+Y D T+ K +++ + LK+ GA +VEI + Sbjct: 235 QSEVNVQKKDYDFKGKKIAVVDLKKYSND---ETVIKEYKEILEILKNMGADLVEIDFEY 291 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +YA Y +I +E SSN++R+DG+RYG L + ++ +++ RS GFG+EVK RI + Sbjct: 292 LKYANALYNVIVTSEVSSNMSRFDGIRYGYLTDDYENTRDLFVKVRSEGFGEEVKRRIAM 351 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT+ L+S Y + K+R L+ ++F F + D+I TPT + + L +++ + Sbjct: 352 GTFYLASSNDQKVYKQGLKVRNLLSQEFKNIF-KDFDLIATPTMTSLPYELDSRKDDPLA 410 Query: 426 MGHIYND-VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +Y+ +F V VN++GL AIS+P + + LQLI EE L + E+ Sbjct: 411 ---VYDSGIFNVIVNLSGLCAISIP---YKSGISTSLQLIANSHDEENLLNAALAFER 462 >gi|241956013|ref|XP_002420727.1| glutamyl-tRNA(gln) amidotransferase subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223644069|emb|CAX41812.1| glutamyl-tRNA(gln) amidotransferase subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 450 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 162/417 (38%), Positives = 232/417 (55%), Gaps = 40/417 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G +KD T +T A S IL + + +T+ L +NG+ ++GK N+DEF MG Sbjct: 39 LSGTTYIVKDNIVTNHGYTTAASKILSNYESPFNATILDLLSNNGSKLIGKSNLDEFGMG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+N SY+ VI+P+ D PGGSSGGS+A+VAG +C+ SIGTDTGGS+R PAS+ Sbjct: 99 SANYNSYFNKVINPYD-----DTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVRLPASY 153 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC----V 246 G KPTYGR SR G+I +A +LD GII V + + D D TC V Sbjct: 154 CNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGDNVNIIKRVYDVLNRCDNKDPTCLPEDV 213 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +P E+ + +T+G+P E+ L LS + + W+ ++ + + G + I++ Sbjct: 214 RKKIPTTEKKI------LTIGVPNEFVLKELSADVREAWEYALTKICELGHSVKPITIKT 267 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKHRIM 364 + ALP+YY ++ AEA+SNL+RYDG+RYG +E+ RS GFG EV+ RI+ Sbjct: 268 IKKALPSYYTLATAEAASNLSRYDGIRYGYNTNEMVHSPIELIATNRSNGFGSEVQRRIL 327 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTTPTS 412 +G Y LSS D HYLRA +IR + +F+ F VD+I++PT+ TS Sbjct: 328 LGNYTLSSDSGD-HYLRATQIREELCAEFSSVFNNSHVLLQDEQSSNNVDLIMSPTS-TS 385 Query: 413 AFPLGKE---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P E N + NDV TV ++AG+PAISVP +G+QL+GQ Sbjct: 386 TAPTWDEYVSANEKNFLNSYVNDVLTVPASLAGIPAISVPVN------GIGIQLMGQ 436 >gi|227548045|ref|ZP_03978094.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium lipophiloflavum DSM 44291] gi|227079843|gb|EEI17806.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Corynebacterium lipophiloflavum DSM 44291] Length = 310 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 197/311 (63%), Gaps = 15/311 (4%) Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIRQPAS TGTVG KPTYG SR G+I+ A SLDQ G V D+A+L + IAG+DE Sbjct: 1 GGSIRQPASLTGTVGAKPTYGGVSRYGVIANASSLDQVGPCANNVLDTALLHEIIAGHDE 60 Query: 241 CDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 DAT V+ VP A + ++G+ +G K++ +++ + L++ G Sbjct: 61 FDATSVDSAVPPVVAAAREGASGDLRGVRIGRVKQFARPGTQDGVNEVIDAAFAQLENQG 120 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRS 352 A+IVE+ P+ + AYY+I +E SSNLAR+DG+RYG R G D E+ TR Sbjct: 121 AEIVEVDCPNFDNVMGAYYLIQTSEVSSNLARFDGMRYGQR-RGDDGSRSAEEVMALTRG 179 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GFG EVK RI++GTY LS YD++YL+A+++RTLI RDFT AFE VDVI P+ PT+ Sbjct: 180 EGFGDEVKRRIILGTYALSVGYYDAYYLQAQRVRTLIARDFTRAFES-VDVIAGPSVPTT 238 Query: 413 AFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 AF LG + ++ +M YN D+FT+ +N+AGLP +SVPA + +P+GLQ+I F + Sbjct: 239 AFKLGDKVDDPLAM---YNFDLFTLPLNLAGLPGMSVPAGTAADTNLPVGLQIIAPAFED 295 Query: 471 ETLFSVGQIIE 481 + ++ VG E Sbjct: 296 DKMYRVGAAFE 306 >gi|256270707|gb|EEU05870.1| YMR293C-like protein [Saccharomyces cerevisiae JAY291] Length = 464 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 154/418 (36%), Positives = 241/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTEETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIEFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG+EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGREVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|328859085|gb|EGG08195.1| hypothetical protein MELLADRAFT_25365 [Melampsora larici-populina 98AG31] Length = 428 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 164/422 (38%), Positives = 241/422 (57%), Gaps = 28/422 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ I IKD F+ K S L F+P Y+S V L +G +LGK NMDEF+MG Sbjct: 3 LNGLTISIKDIFSVKDETNTCASKFLKDFKPAYDSAVVSLLKKSGIKILGKTNMDEFSMG 62 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAA-VAGFLCAASIGTDTGGSIRQPAS 189 SS+ S++GPV++P + + KF G S G SA VA L +IG+DTGGS R PA+ Sbjct: 63 SSSSFSHFGPVLNP-NGVSNNQKFRSPGGSSGGSAVTVASGLSDLAIGSDTGGSTRLPAA 121 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 + G VG+KP+YG SR G++ ++ SLD G+ ++++ L +++ G D+ D T V Sbjct: 122 YCGVVGLKPSYGAISRYGMVQYSHSLDCVGLFSKSIDLIHKLFESLVGLDKRDPTSVEWK 181 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + + + + +GIP EY L P + + +Q S LK GA +V +SLP T Y Sbjct: 182 SNPETKTTSKDLSDLRIGIPIEYYTTDLQPELFQRIRQVASSLKSRGATLVSVSLPSTSY 241 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILE-MYENTRSIGFGQEVKHRIMIG 366 +L AYY+I+ AEASSNLARY GV YG+ +E + E M+ +RS GFG+EVK RI++G Sbjct: 242 SLGAYYVIASAEASSNLARYSGVHYGINTSIESCNQSEKMFVESRSNGFGEEVKRRILLG 301 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG------------VDVILTPTTPTSAF 414 TY LS+ ++++L+A++IR I +F F + VD++LTP + + A Sbjct: 302 TYALSASGMENYFLKAQRIRNKICEEFDSVFRKNNQEDAIESNSEKVDILLTPPSLSIAP 361 Query: 415 PLGKEENNSGSMGHIY-----NDVFTVAVNMAGLPAISVPAALCE------KKMPLGLQL 463 L E++NS G D V ++AGLP++ +P E KK P+G+QL Sbjct: 362 ELNLEKSNSNEEGEEIRKSWGQDQLLVPASLAGLPSLVIPLEKIEVQEDKGKKWPVGVQL 421 Query: 464 IG 465 IG Sbjct: 422 IG 423 >gi|302348266|ref|YP_003815904.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acidilobus saccharovorans 345-15] gi|302328678|gb|ADL18873.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acidilobus saccharovorans 345-15] Length = 479 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 168/467 (35%), Positives = 262/467 (56%), Gaps = 21/467 (4%) Query: 25 ELVDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 E V +AIE ++ +I +VV ++A+ E ++ + G L G+ + +K Sbjct: 22 EHVMEVYEAIERWEPKVKGFITLLDRDVVIKRAK----EVERELREGRKLPLAGLVVAVK 77 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D +T T A S IL G+ P + +TV ++L + GA+++GK NMDEFAMGS+ E S + Sbjct: 78 DNISTSFAPTTAGSRILSGYVPPFNATVVERLLEAGAIIIGKTNMDEFAMGSTTELSGFW 137 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 P +PW +D PGGSSGGS+AA+A ++G+DTGGS+R PA++TGTVG+KPT Sbjct: 138 PTRNPW-DLDRV----PGGSSGGSAAALAYGGADLALGSDTGGSVRLPAAYTGTVGLKPT 192 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YG SR G+I +A SL+Q + R+VRD A+LL+ IAG+D DAT + + Sbjct: 193 YGLVSRYGLIPYANSLEQISPMARSVRDVALLLEVIAGHDPRDATSLTIDRISLSSTPSP 252 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI-VEISLPHTQYALPAYYIIS 318 + + + +P E +D + T + + L+ G ++ ++SLP ALP YY I+ Sbjct: 253 NPKDFRICVPHEM-IDGSDAPVRGTIIKLLDRLQSEGVEVNYDVSLPSAADALPIYYTIA 311 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 AEA+SNLARYDG Y + E TR+ GFG+EVK RI++G LS D Sbjct: 312 LAEAASNLARYDGKLYPFAELRPNYTETVTATRARGFGREVKRRIVLGVMALSEGYRDEF 371 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 Y+ A K R L++ + V+ +PT +G+ + + + DV+TV Sbjct: 372 YVAAAKGRRLLRDEVLRLTRNC--VVAGSVSPTLPPRIGERITDPLKLYAL--DVYTVIA 427 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+AG+P++++PA +P+G+Q +G P E L ++G+++E G Sbjct: 428 NLAGVPSLAMPAGFY-SDLPVGVQFMGGPLEEAKLVALGELVESVTG 473 >gi|156742215|ref|YP_001432344.1| amidase [Roseiflexus castenholzii DSM 13941] gi|156233543|gb|ABU58326.1| Amidase [Roseiflexus castenholzii DSM 13941] Length = 463 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 165/495 (33%), Positives = 260/495 (52%), Gaps = 35/495 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + + ++ D L ++ISAVEL +++ I ++++N++I V A A A A +D Sbjct: 1 MSDLFRLTIEDAADLLARREISAVELTSAHLDRIATHDTRLNSFITVTADHALAQARAAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G R L GIPI +KD + T G+ T A + P ++ L+ GAV+L Sbjct: 61 NELARGARRSPLHGIPIALKDLYDTAGVRTTAGATFFAERMPDVDARAVTLLYQAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNM E+A+G +N +YGP +PW T + T GGSSGG++AA+A LC ++G+D Sbjct: 121 GKLNMHEWALGVTNINPHYGPSRNPW----DTSRIT-GGSSGGAAAALAAGLCMGALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PAS G VG KPT+GR S G++ + +LD AG + RTV D+A+LL+AIAGYD Sbjct: 176 TGGSIRIPASLCGIVGFKPTFGRVSLQGVVPLSWNLDHAGPMARTVTDAALLLQAIAGYD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V PV D ++D + G + + + + + + ++ GA++ Sbjct: 236 PDDPVSVAAPVDDLLASIDAGVGGWRIALADDAHFGNADAEVLASVHRAAGVFEELGARV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + L Q A +++ ++A++ +D L + FG +V Sbjct: 296 ERVDLGRGQDAAQMNALMTTSDAAAF--------------HRDRLRAHPEQ----FGADV 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ G S + Y+ AR+ ++ +R FEQ DV+LTPTTP +A P+ E Sbjct: 338 RMRLERGAAFTS-----TEYILARRFQSEWRRQLERLFEQ-FDVLLTPTTPITALPI--E 389 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +S T N+AGLPA+S P + +P+GLQ++ P+RE + G+ Sbjct: 390 GLDSVEAARQLTRC-TAPFNLAGLPALSAPCGMSAAGLPIGLQIVAAPWREAHVLRAGKA 448 Query: 480 IEKEAGYFR--PHKW 492 E+ + R P W Sbjct: 449 FERATSWHRQTPPGW 463 >gi|169824268|ref|YP_001691879.1| glutamyl-tRNA amidotransferase subunit A [Finegoldia magna ATCC 29328] gi|303234037|ref|ZP_07320686.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Finegoldia magna BVS033A4] gi|167831073|dbj|BAG07989.1| glutamyl-tRNA amidotransferase subunit A [Finegoldia magna ATCC 29328] gi|302494962|gb|EFL54719.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Finegoldia magna BVS033A4] Length = 463 Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 151/412 (36%), Positives = 237/412 (57%), Gaps = 17/412 (4%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+ + +KD K + S +L+ + Y++TV +KL + V++GK+NMDEFAMGSS Sbjct: 66 GVAVSVKDNINVKDLKMTCGSKMLEDYVSIYDATVIKKLKEEDCVIVGKVNMDEFAMGSS 125 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +ETSY+GP +P + K PGGSS GS+A++ + S+GTDTGGS RQPAS Sbjct: 126 SETSYFGPTKNPVDT-----KLIPGGSSSGSAASIKAEMAVVSLGTDTGGSSRQPASCCN 180 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG PTYG SR G+ S A +LD+ GI++ +V D IAG+D+ D T + V Sbjct: 181 VVGFMPTYGSISRFGVQSMANTLDEVGILSNSVEDIMDTYNVIAGHDDNDMTTIQSEVNV 240 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++ D + + V K+Y D T+ K +++ + LK+ GA +VEI + +YA Sbjct: 241 KKKDYDFKGKKIAVVDLKKYSND---ETVIKEYKEILEILKNMGADLVEIDFEYLKYANA 297 Query: 313 AYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 Y +I +E SSN++R+DG+RYG L + ++ +++ RS GFG+EVK RI +GT+ L+ Sbjct: 298 LYNVIVTSEVSSNMSRFDGIRYGYLTDDYENTRDLFVKVRSEGFGEEVKRRIAMGTFYLA 357 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S Y + K+R L+ ++F F++ D+I TPT + + L +++ + +Y+ Sbjct: 358 SSNDQKVYKQGLKVRNLLSQEFKNIFKE-FDLIATPTMTSLPYELDSRKDDPLA---VYD 413 Query: 432 D-VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +F V VN++GL AIS+P + + LQLI EE L + E+ Sbjct: 414 SGIFNVIVNLSGLCAISIPY---KSGISTSLQLIANSHDEENLLNAALAFER 462 >gi|190408519|gb|EDV11784.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|207342045|gb|EDZ69926.1| YMR293Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|323307598|gb|EGA60865.1| YMR293C-like protein [Saccharomyces cerevisiae FostersO] Length = 464 Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 154/418 (36%), Positives = 240/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|148673079|gb|EDL05026.1| mCG12257, isoform CRA_b [Mus musculus] Length = 353 Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 203/333 (60%), Gaps = 14/333 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L+ ++ EL + + I+ + +NAYI V + A AEES+KR G + DL+GI Sbjct: 13 LKQGQVTPTELCKNCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQSLGDLDGI 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DEFAMGS + Sbjct: 72 PVAVKDNFSTTGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGST 131 Query: 135 TSYYGPVISPW--------RSM----DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +GPV +PW RS D + GGSSGGS+AAVA F C A++G+DTGG Sbjct: 132 DGVFGPVRNPWTYSKQYRERSRQDAGDDSHWLITGGSSGGSAAAVAAFTCFAALGSDTGG 191 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+L +AG+D D Sbjct: 192 STRNPAAHCGIVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDTAIVLGTLAGHDPKD 251 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +T V P + + +GIPKEY + LS + W Q + GAK++E+ Sbjct: 252 STTVRNPAQPASVPGGMDVSRLCIGIPKEYLVPELSSEVRSLWSQAADLFESEGAKVIEV 311 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 SLPHT Y++ Y+++ +E +SN+AR+DG++YG Sbjct: 312 SLPHTCYSIVCYHVLCTSEVASNMARFDGLQYG 344 >gi|316969675|gb|EFV53733.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Trichinella spiralis] Length = 711 Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 164/462 (35%), Positives = 241/462 (52%), Gaps = 60/462 (12%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDG 98 +N +I + A A ++ NG+ R L G+PI +KDCF+TKG+ T S L+ Sbjct: 284 LNIFITETFEDALAQVVNLSRKFCNGEKRKHPLFGLPIVVKDCFSTKGVRTTLGSKALEN 343 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR------SMD--- 149 ++P++ +TV +KL G V+LGK NMDEF MG+S SY+GPV +PW D Sbjct: 344 YKPNFTATVVEKLLQRGCVLLGKTNMDEFCMGTSGTNSYFGPVKNPWTFEVWRGKFDKEH 403 Query: 150 --STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 D + GGSSGGS+AAVA + ++G+DTGGS R PA++ G VG KPTYG SR G Sbjct: 404 NLKNDWYITGGSSGGSAAAVACGISEIALGSDTGGSCRNPAAYCGVVGFKPTYGLLSRHG 463 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVG 267 ++ SLD GI+ + V+D ++ L A+AG D D+T Sbjct: 464 LVPLINSLDCVGILAKRVKDVSLALDAMAGRDWKDST----------------------- 500 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 E+ YLS + W+ S L ++ G K+VE+SLPHT+++ Y+I+ +E +SN+ Sbjct: 501 --MEFYTPYLSADVVNYWKLISSILEREGGCKLVELSLPHTRFSNVCYHILGCSEIASNM 558 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 ARYDG+ Y GK + R E+ M+ S HYLR Sbjct: 559 ARYDGMEY-----GKGLTVFVVACRRYRSNDEISFPSMLTRSRQESLNDVVHYLRVFN-- 611 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSMGHIYNDVFTVAVNMAGLP 444 +Q VDV+LTP T + A PL + ++ + +D FT+ N+AGLP Sbjct: 612 -----------DQTVDVLLTPATSSDA-PLYSQLKKDLCNCIQERRDDYFTLPANLAGLP 659 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 A+ +P L + +P+GLQLIG+ F E+ L + Q +E + Sbjct: 660 ALVLPVGLSGQNLPVGLQLIGKHFGEKQLLQLAQWLETRLSF 701 >gi|326507796|dbj|BAJ86641.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 314 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 125/301 (41%), Positives = 191/301 (63%), Gaps = 13/301 (4%) Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG+KPTYGR SR G++++A SLD G +V D+A +L IAG+D+ D+T + VP Sbjct: 2 GVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVFDTATILSVIAGHDKMDSTSSSHDVP 61 Query: 252 DYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY L + + + +GI +E + + + + + S L+ G+ + E+S+ Sbjct: 62 DYRSDLASLSLLESKPLNNVRIGIIQETLGEGVDAGVISSIRAAASHLEQLGSVVEEVSM 121 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P LPAYYI++ +EASSNL+RYDG+RYG +V D+ E+Y N+R+ G G EVK RI+ Sbjct: 122 PSFSLGLPAYYILASSEASSNLSRYDGIRYGRQVSADDLNELYGNSRASGLGHEVKMRIL 181 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +GTY LS+ YD++Y RA+++RTL+K+ F EA + D++++P P++A+ +G++ N+ Sbjct: 182 MGTYALSAGYYDAYYKRAQQVRTLVKKSFEEALGK-YDILISPAAPSAAYKIGEKTNDPL 240 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIE 481 +M D+ TV VNMAGLPA+ VP E +P+GLQ+IG PF E L VG I E Sbjct: 241 AM--YAGDIMTVNVNMAGLPALVVPCGFVEGGSAGLPVGLQMIGSPFSEGNLLRVGHIFE 298 Query: 482 K 482 + Sbjct: 299 Q 299 >gi|257066472|ref|YP_003152728.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaerococcus prevotii DSM 20548] gi|256798352|gb|ACV29007.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Anaerococcus prevotii DSM 20548] Length = 470 Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 152/445 (34%), Positives = 249/445 (55%), Gaps = 17/445 (3%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHIL 96 N ++NAYI + + + A++ D+++ NG + L G+P+ +KD + + S +L Sbjct: 30 NDELNAYISIDREGSIERAKKLDEKLKNGYEIGSLFGVPVAVKDNISYDQMKMTCASKML 89 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 + F+P Y ++V + L A+++ K NMDEFAMG +TSY+GP +P +K P Sbjct: 90 ENFKPVYNASVVENLLKEDAIIVAKTNMDEFAMGGRGKTSYFGPTKNPL-----DNKRVP 144 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 GGSS GS+AAVA ++GTDTGGS+R PAS+ +G KPTY SR G++S A +LD Sbjct: 145 GGSSSGSAAAVAKGDVLIALGTDTGGSVRCPASYCNILGYKPTYSIMSRYGVVSMANTLD 204 Query: 217 QAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY 276 Q + ++ + D +L A +D D T NL +Y D +G +G K Y Sbjct: 205 QVSLFSKNIEDMRVLANTTASHDPKDMTS-NLEKYEYSYE-DYDFKGKKIGFIKTESSLY 262 Query: 277 --LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 + + K +Q+ + L+ GA++ I L + +YA P Y ++ +E SSN++R+DGVR+ Sbjct: 263 EGIEEEVKKDYQKALDILQSLGAELFPIDLDYAKYANPVYNVVMSSEVSSNMSRFDGVRF 322 Query: 335 GLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 G + + + + E++ +RS G G+EV+ RI +GT LSS Y + K+R+LIK + Sbjct: 323 GYQADDYESVEELFVKSRSEGLGEEVQRRIALGTMYLSSNDNQKIYKQGLKLRSLIKDEL 382 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 E FE+ +D+++TPTT L +E++ + D F V VN+AG+ +S+P Sbjct: 383 EEVFEE-IDLLITPTTTNLPPYLTDDEHD--PLSDFRADGFNVIVNLAGMCGLSLP---I 436 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQ 478 + + +Q I F + L + G+ Sbjct: 437 REGISGSVQFIANRFEDNKLINAGE 461 >gi|6323950|ref|NP_014021.1| Her2p [Saccharomyces cerevisiae S288c] gi|2492830|sp|Q03557|GATH_YEAST RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Short=Glu-ADT subunit A; AltName: Full=HMG2-induced ER-remodeling protein 2; AltName: Full=Loss of respiratory capacity protein 6; Flags: Precursor gi|530350|emb|CAA56802.1| unnamed protein product [Saccharomyces cerevisiae] gi|285814299|tpg|DAA10194.1| TPA: Her2p [Saccharomyces cerevisiae S288c] gi|323353216|gb|EGA85516.1| YMR293C-like protein [Saccharomyces cerevisiae VL3] Length = 464 Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 154/418 (36%), Positives = 240/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDLLIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|302380739|ref|ZP_07269204.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Finegoldia magna ACS-171-V-Col3] gi|302311682|gb|EFK93698.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Finegoldia magna ACS-171-V-Col3] Length = 463 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 150/412 (36%), Positives = 236/412 (57%), Gaps = 17/412 (4%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+ + +KD K + S +L+ + Y++TV +KL + +++GK+NMDEFAMGSS Sbjct: 66 GVAVSVKDNINVKDLKMTCGSKMLEDYVSIYDATVIKKLKEEDCIIVGKVNMDEFAMGSS 125 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +ETSY+GP +P + K PGGSS GS+A++ + S+GTDTGGS RQPAS Sbjct: 126 SETSYFGPTKNPVDT-----KLIPGGSSSGSAASIKAEMAVVSLGTDTGGSSRQPASCCN 180 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG PTYG SR G+ S A +LD+ GI++ +V D IAG+D+ D T + V Sbjct: 181 VVGFMPTYGSISRFGVQSMANTLDEVGILSNSVEDIMDTYNVIAGHDDNDMTTIQSEVNV 240 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++ D + + V K+Y D T+ K +++ + LK+ GA +VEI + +YA Sbjct: 241 KKKDYDFKGKKIAVVDLKKYSND---ETVIKEYKEILEILKNMGADLVEIDFEYLKYANA 297 Query: 313 AYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 Y +I +E SSN++R+DG+RYG L + ++ +++ RS GFG+EVK RI +GT+ L+ Sbjct: 298 LYNVIVTSEVSSNMSRFDGIRYGYLTDDYENTRDLFVKVRSEGFGEEVKRRIAMGTFYLA 357 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S Y + K+R L+ ++F F + D+I TPT + + L +++ + +Y+ Sbjct: 358 SSNDQKVYKQGLKVRNLLSQEFKNIF-KDFDLIATPTMTSLPYELDSRKDDPLA---VYD 413 Query: 432 D-VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +F V VN++GL AIS+P + + LQLI EE L + E+ Sbjct: 414 SGIFNVIVNLSGLCAISIPY---KSGISTSLQLIANSHDEENLLNAALAFER 462 >gi|323332196|gb|EGA73607.1| YMR293C-like protein [Saccharomyces cerevisiae AWRI796] Length = 464 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 154/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLIHLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|151946001|gb|EDN64233.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 464 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 154/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F +++TV + L G +LGK N+D Sbjct: 39 GTEETLTGCVASIKDNIVTKDFPTTCASHILENFESPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPVKVGIVKEFSHESMPIEFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|71020843|ref|XP_760652.1| hypothetical protein UM04505.1 [Ustilago maydis 521] gi|46100154|gb|EAK85387.1| hypothetical protein UM04505.1 [Ustilago maydis 521] Length = 539 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 160/457 (35%), Positives = 244/457 (53%), Gaps = 46/457 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G IK + T S +L F+P ++++ L G + N DEF MG Sbjct: 86 LKGWTAAIKSNICIRDHPTTCSSAMLQHFKPTFDASAVSLLRQAGTDIRYITNCDEFGMG 145 Query: 131 SSNETSYYGPVISPWRSMDST--------DKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 S+N S +GPV +P + ++ G S G ++ AG + A +G+DTGG Sbjct: 146 SNNIHSVHGPVRNPASPRSESGPIWNLEEERVAGGSSGGSAAVVKAGLVRFA-LGSDTGG 204 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA++ G VG+KP+YG SR G++S+A SLD G++ +TV D +++ ++ D D Sbjct: 205 SVRLPAAYCGIVGLKPSYGLVSRWGLVSYADSLDTVGVLAKTVEDVSVVHSVLSQNDPHD 264 Query: 243 ATCVN--------LPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 T + V AL Q ++G+ VG+PKEY L P + +++ + Sbjct: 265 PTSASQQARAAAATTVETLISALPSSNSSQPLKGLRVGVPKEYFPVELHPRVLPPFRRAV 324 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 + L++ GA++V+I+LP T AL AYYIIS AEASSNLARYDGV YG Y Sbjct: 325 AGLEELGAQVVQITLPSTPSALSAYYIISSAEASSNLARYDGVEYGFHTPSAPGHHAYAA 384 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF------------ 397 TR+ FG EV+ RI++GT+ L++ YD+++L+A ++R ++ DF A Sbjct: 385 TRTTAFGDEVRKRILLGTFALTADAYDNYFLQASRVRAQVQEDFASALRIRNASTKDDKL 444 Query: 398 ----EQGVDVILTP----TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 ++GVDVIL P T PT A + E S DV TV ++AGLPA++VP Sbjct: 445 TARDQEGVDVILHPSAVDTAPTLAAAMQPGEP---SAAEYVQDVLTVPASLAGLPALAVP 501 Query: 450 A-ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 A A + P+G+ L+ Q +E L VG+ ++ + G Sbjct: 502 AGAASDDGWPVGVTLVSQWGCDEVLLHVGKHLQTQLG 538 >gi|50295046|ref|XP_449934.1| hypothetical protein [Candida glabrata CBS 138] gi|49529248|emb|CAG62914.1| unnamed protein product [Candida glabrata] Length = 467 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 160/437 (36%), Positives = 243/437 (55%), Gaps = 34/437 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ GIKD TK + T S IL G++ Y++TV + L G+++LGK N+DEF MG Sbjct: 39 LSGLLCGIKDNIVTKDMPTTCGSEILRGYQSPYDATVVKLLKQEGSIVLGKTNLDEFGMG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S S +GP +P + DK GGSS GS+AAV S+GTDTGGS+R PA++ Sbjct: 99 SRGIHSCFGPTFNPLYP--AADKVIMGGSSSGSAAAVVSEAVDFSLGTDTGGSVRLPATY 156 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KP+YGR SR G+I++A SLD GI+T+ + + + YD+ D T + Sbjct: 157 GSIYGFKPSYGRISRYGVIAYAQSLDTVGILTKNISTLRKVYHVLDKYDDKDPTSLENSY 216 Query: 251 PD-----YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 D +ER + + +GI KE+ D + TI + + L D G +V IS+P Sbjct: 217 RDQILGIHERNTIKERKKYRIGIAKEFSQDSIPETIMEALLAFVKKLLDLGHDVVPISIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + ALP YY +SPAEA SNL+R+DG+RYG R + D+ + M+ TR FG+EVK+RI Sbjct: 277 SIKNALPIYYTLSPAEAVSNLSRFDGIRYGYRDQESDMSDNVMFAPTRK-QFGREVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------------EQGVDVILTPT 408 ++G Y L S + ++Y+RA+K+R + + F E VD +++ T Sbjct: 336 LLGNYNLCSESFKNNYIRAQKLRVQLIDEMDSVFRYPNVLLNNKETTKSETNVDFLISLT 395 Query: 409 TPTSAFPLGKEENNSGSMG----HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 TP + P E+ + + NDVFT+ +++AGLP +S+P + P+G+QL+ Sbjct: 396 TP--SLPKKLEDFSVSDLDTPTKEYINDVFTMPMSLAGLPTLSIPIIPGQ---PIGVQLV 450 Query: 465 GQPFREETLFSVGQIIE 481 GQ +E + ++I+ Sbjct: 451 GQYGFDEMVLDFAEMIQ 467 >gi|87302219|ref|ZP_01085044.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Synechococcus sp. WH 5701] gi|87283144|gb|EAQ75100.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Synechococcus sp. WH 5701] Length = 304 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 132/293 (45%), Positives = 185/293 (63%), Gaps = 5/293 (1%) Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR SR G+++FA SLDQ G + +V D+A LL+ IAG D D TC+ VPDY Sbjct: 2 VGLKPTYGRVSRWGLVAFASSLDQVGPFSTSVADAAELLQVIAGEDRRDGTCLKADVPDY 61 Query: 254 ERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 AL ++G+ VG+ KE + + L P + + + L+ G ++V++S P + Sbjct: 62 SAALQAPVKGLRVGLVKECFEAEGLDPQVKASVLAAAAQLEALGCELVDVSCPRFNDGIA 121 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+I+P+EAS+NLARYDGV+YG R E + EM +R+ GFG EV+ RI+IGTY LS Sbjct: 122 TYYVIAPSEASANLARYDGVKYGYRSEQAGSLAEMTARSRAEGFGDEVQRRILIGTYALS 181 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + D++Y +A+++RTLI+RDF AF VDV+LTPT+PT+AF G + +M Sbjct: 182 AGYVDAYYKKAQQVRTLIRRDFDAAF-GAVDVLLTPTSPTTAFRFGAHAEDPLAM--YLA 238 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 D+ T+ NMAGLPAISVP + +P+GLQLI E L V E+ A Sbjct: 239 DLLTIPANMAGLPAISVPCGFDDGGLPIGLQLITGVLEEPRLLQVAHHYEQAA 291 >gi|323303485|gb|EGA57279.1| YMR293C-like protein [Saccharomyces cerevisiae FostersB] Length = 464 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 153/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTXETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD I+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVXILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIXFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|323335997|gb|EGA77273.1| YMR293C-like protein [Saccharomyces cerevisiae Vin13] Length = 464 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 153/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S GPVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIRGPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ RS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPXRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|156841054|ref|XP_001643903.1| hypothetical protein Kpol_1067p17 [Vanderwaltozyma polyspora DSM 70294] gi|156114532|gb|EDO16045.1| hypothetical protein Kpol_1067p17 [Vanderwaltozyma polyspora DSM 70294] Length = 467 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 143/417 (34%), Positives = 241/417 (57%), Gaps = 27/417 (6%) Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L + +G+KD TK + T S IL+ F+ +++TV + L + GAV+ GK N+DEF Sbjct: 43 KSLSNVLVGVKDNIVTKDMPTTCSSKILEDFKSPFDATVVELLKNEGAVIAGKTNLDEFG 102 Query: 129 MGSSNETSYYGPVISP-WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 MGSS SY+GP +P + + + + GS+ ++ V F ++GTDTGGS+R P Sbjct: 103 MGSSGIHSYFGPTTNPIFADVPTVVGGSSSGSAAAAAGGVVDF----ALGTDTGGSVRLP 158 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++T +G KP+YGR SR G+I++A S D GI+++ + K + +D D T + Sbjct: 159 AAYTSILGFKPSYGRISRYGVIAYAQSFDTVGILSKDISIVKQAFKILDKHDRKDPTSLG 218 Query: 248 LPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + + + S + +G+PKE+ + + +I + I +K G +IV +S+P Sbjct: 219 TELRELLPKDTGNSNGKLRIGLPKEFVQESVPVSIRNKYLSFIENMKSKGHEIVPVSIPS 278 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRIM 364 ++ALP YY + P+EASSNL+R+DGVRYG R E D+++ ++ TR FG+ V+ RI+ Sbjct: 279 VKHALPIYYTLVPSEASSNLSRFDGVRYGTRDEHSDLVDNTLFAPTRQY-FGKSVQERII 337 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ------------GVDVILTPTT--- 409 +G Y L S Y ++Y++A+++R + +F + F++ GVD+++ T+ Sbjct: 338 LGNYNLCSGSYKNNYIKAQRLRVQMVNEFDQVFKKSNVLTNSKGNNAGVDMLVCLTSVDK 397 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P + +E S + DVFT+ +++AGLP IS+P E+ P+G+QL+GQ Sbjct: 398 PKTLARALEESRLSSPVNEYITDVFTLPMSLAGLPTISIP---IEEGEPVGVQLVGQ 451 >gi|255723325|ref|XP_002546596.1| hypothetical protein CTRG_06074 [Candida tropicalis MYA-3404] gi|240130727|gb|EER30290.1| hypothetical protein CTRG_06074 [Candida tropicalis MYA-3404] Length = 459 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 159/426 (37%), Positives = 240/426 (56%), Gaps = 33/426 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G +KD TK + A S L ++ + +T+ L G+ ++GK N+DEF MG Sbjct: 45 LSGTKYILKDNIVTKNSTSTAASKTLSNYKSPFNATIVDLLSSQGSTLVGKSNLDEFGMG 104 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+N SY+GPVI+P T SSGGS+AAV+ +C SIGTDTGGS+R PAS+ Sbjct: 105 SANLNSYFGPVINPQDKPKITGG-----SSGGSAAAVSSGICDFSIGTDTGGSVRLPASY 159 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KPTYGR SR G+I +A +LD GI+ + + + YDE D T +LP Sbjct: 160 CQVFGFKPTYGRISRWGVIPYAQTLDTVGILGNNIDIIHEVYNVLNKYDEKDPT--SLP- 216 Query: 251 PDYERALDQSI--QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + +D +I + + +GIP+E+ LD LS + +W++ + L++ G +I IS+ + Sbjct: 217 EEVRNKIDATINTEKLVIGIPEEFILDELSDAVRNSWKEILVRLQEQGHEIKPISIGSIK 276 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK--DILEMYENTRSIGFGQEVKHRIMIG 366 +LPAYY ++ AEA+SNL+RYDG+RYG + + ++ + RS FG EV+ RI++G Sbjct: 277 KSLPAYYTLATAEAASNLSRYDGIRYGDNSQNQVETASDLIFSNRSTNFGPEVQRRIILG 336 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ------------GVDVILTPTTPTSAF 414 Y LSS D HYLRA +IR + +F+ +F++ GVD+I+ PT SA Sbjct: 337 NYTLSSDSGD-HYLRATEIRRELCIEFSTSFKKSHILLQDGETSTGVDLIIAPTATKSAP 395 Query: 415 PLGK--EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + + EN + NDV TV ++ G+P IS+P +G+QL+GQ +E Sbjct: 396 NVDEFVSENEENFLNGYVNDVLTVPASLTGIPTISIPFN------GIGIQLMGQFGDDEL 449 Query: 473 LFSVGQ 478 + V + Sbjct: 450 VLQVAK 455 >gi|227485015|ref|ZP_03915331.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Anaerococcus lactolyticus ATCC 51172] gi|227237012|gb|EEI87027.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Anaerococcus lactolyticus ATCC 51172] Length = 477 Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 153/471 (32%), Positives = 260/471 (55%), Gaps = 23/471 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLE 72 D+ ++++IS E + ++ I+N ++ NAYI + + A+ D+++ +G + L Sbjct: 15 DKYKNREISVEENTKNILEKIKNDDT--NAYITFDEEDSLKRAKLLDEKLASGAELGSLF 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GI + +KD + K ++ S +L+ FRP +++ V + L A+++ K NMDEFAMG Sbjct: 73 GIAVAVKDNISYKNMNMTCASKMLENFRPMFDAKVVENLLAEDAIIIAKTNMDEFAMGGR 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +TSY+GPV +P +D T S ++ A L A +GTDTGGS+R PAS+ Sbjct: 133 GKTSYFGPVKNP---VDKTRLTGGSSSGSAAAVAKEDVLIA--LGTDTGGSVRCPASYCN 187 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 +G KPTY SR G++S A +LDQ + + V D + + I G DE D T + + D Sbjct: 188 ILGYKPTYSMVSRNGVVSMANTLDQVSVFGKNVADIRTIAQVIEGPDEHDMT---VRLDD 244 Query: 253 YERALDQ-SIQGMTVG-IP--KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y+ +D +G + IP E +D + T++K + + LK GA + I+L +++ Sbjct: 245 YKYEMDTYDFKGKKIAYIPSDDEMHMD-IDSTVEKDYNSALDELKKLGADLSPINLKYSK 303 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 YA P Y ++ +E SSN++R+DG+R+G + + + E++ N+RS G G+EV+ RI +GT Sbjct: 304 YANPVYNVVMSSEVSSNMSRFDGIRFGYQSDKYTSVDELFINSRSEGLGEEVQRRIALGT 363 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 LS+ Y + K+RTLIK++ E F + D+I+TPT + P +++ + Sbjct: 364 MYLSADDNQRVYRQGLKLRTLIKQELEEVF-KTYDLIITPT--VTNLPPSLDDDYQDPLS 420 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D F V VN++G+ +SVP K + +Q I + L + G+ Sbjct: 421 DFKSDGFNVIVNLSGMCGLSVP---VRKGISGSVQFIANANEDSKLLNAGE 468 >gi|259148882|emb|CAY82127.1| EC1118_1M3_5061p [Saccharomyces cerevisiae EC1118] Length = 464 Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 153/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S PVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIREPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDILIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|116626070|ref|YP_828226.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Solibacter usitatus Ellin6076] gi|116229232|gb|ABJ87941.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Candidatus Solibacter usitatus Ellin6076] Length = 460 Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 169/472 (35%), Positives = 260/472 (55%), Gaps = 43/472 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + + LRS+ +S+VEL + I ++ N + A+I ++A A +D ++ G Sbjct: 1 MTILNAAEALRSRRVSSVELTTAAIARMDRHN-DLRAFITATTEQAMHQARTADAELVGG 59 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L GIPI +KD FATKG+ T A S I + F P ++TV +L D GAVMLGKLNM Sbjct: 60 TDRGPLHGIPIALKDLFATKGVRTTAGSRIYERFIPSIDATVVARLHDAGAVMLGKLNMH 119 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A G ++ ++G V +PW + +PGGSSGGS AAVA + ++G+DTGGSIR Sbjct: 120 ELAYGITSANPHFGAVRNPWNR-----EHSPGGSSGGSGAAVASGMVYMALGSDTGGSIR 174 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF GTVG+KPTYGR SR G++ SLD G +TR+VRD+A +L AIAG D D T Sbjct: 175 IPASFCGTVGLKPTYGRVSRYGVLPLGFSLDHVGPLTRSVRDAATVLNAIAGRDPRDPTT 234 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV DY SI+G+ +G P+ + D L P ++ + + I+ + GA+++ + LP Sbjct: 235 SRHPVVDYVPDEQCSIRGLRIGFPENFYFDRLDPDVESSVRGAIARAESLGAQVLPVVLP 294 Query: 306 HTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 ++A + V R L E +E + RS+ FG +V + Sbjct: 295 -------------------DIAAMNAVARIILLAEAAAAVEPHTADRSL-FGPDVLALLD 334 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G + + + Y+ A+++R ++R+F + + V+ I+ P+TP +A +G + + Sbjct: 335 QGRLIPA-----TDYVNAQRLRRKMRREFDRVWSE-VECIIAPSTPNTAPRIG---DATI 385 Query: 425 SMGHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +G + DV +N+ G P++S+P L +PL LQ+IG F E Sbjct: 386 RLGGVEEDVRLATTRLVRGINLLGYPSLSLPCGLSSAGLPLSLQIIGPAFEE 437 >gi|288561425|ref|YP_003424911.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit A GatA [Methanobrevibacter ruminantium M1] gi|288544135|gb|ADC48019.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit A GatA [Methanobrevibacter ruminantium M1] Length = 467 Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 167/469 (35%), Positives = 257/469 (54%), Gaps = 31/469 (6%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 M + E + +++++I+A E V+SYI+ IE N ++NA++E+ + A A AEE D +I Sbjct: 6 LMNILEKLNAIKNQEITAKENVESYIKVIEEKNDELNAFLELNKEDAIAKAEEIDAKIKA 65 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G + L G+ GIK + + A S L+ + Y++TV + + +++G NM Sbjct: 66 GEEVGALAGLVFGIKANINVEDLIISAASKTLEDYIGSYDATVVKLIKAEDGIIIGINNM 125 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA GSS ETSYYG V +P + PGGSSGGS+AA A +C +IG+DTGGSI Sbjct: 126 DEFAAGSSTETSYYGAVNNP-----AAPGRIPGGSSGGSAAAAAAGMCDIAIGSDTGGSI 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P+S G G+KPTYG SR G++ + SLDQ G + R V + L I YD + T Sbjct: 181 RNPSSHCGVYGMKPTYGAVSRQGLLDLSMSLDQIGPMARDVTGITLALDTIVKYDPTECT 240 Query: 245 CVNLPVPDY-ERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + P++ E AL ++ ++GM + KE++ + + I++ + ++ L+ GA+ Sbjct: 241 TLKWDAPNFTEIALSVKDKEKPLEGMKIATCKEFK-EVTNDEINEIIDESVAKLESLGAE 299 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VE+S + LP YY+I+ E S +YDG +YG R+E G E Sbjct: 300 VVELSFDYIDICLPTYYLINYVEFFSATRKYDGRKYGSRIEEV-------------CGPE 346 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V RI +G+Y+ +Y +A + R+LI+ + E GVD+I+ PT P LG+ Sbjct: 347 VLRRIQMGSYISQKEFSGKYYQKALQARSLIRNAINDMLE-GVDLIVGPTVPKLPHKLGE 405 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 E M DV TV N+AG+PA S+ A + +P+GLQL +P Sbjct: 406 ELE---PMEMYAYDVLTVIANLAGIPAASLKAGEVD-GIPVGLQLQAKP 450 >gi|323346983|gb|EGA81260.1| YMR293C-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 464 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 153/418 (36%), Positives = 239/418 (57%), Gaps = 24/418 (5%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G IKD TK T SHIL+ F+ +++TV + L G +LGK N+D Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLD 98 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF MGS S PVI+P + DK GGSS G++A+VA L ++GTDTGGS+R Sbjct: 99 EFGMGSGGVHSIREPVINPLYPHE--DKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA + +G KP+YGR SR G+I+++ SLD GI+++ + + + YD D T Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTS 216 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ + + + + + VGI KE+ + + + + + L + G +I +S+P Sbjct: 217 LSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIP 276 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRI 363 + LP YY +SPAEA+SNL+RYDG+RYG R DI + ++ TRS FG EVK+RI Sbjct: 277 SVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRS-KFGTEVKNRI 335 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE------------QGVDVILTPTT-- 409 ++G Y L S + +++++A K+R + +F F G+D+++ PT+ Sbjct: 336 ILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDLLIVPTSSK 395 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P S +EE S + +I NDVFTV +++AGLP++S+P ++K P+GLQ++GQ Sbjct: 396 LPGSIRDFEEEEAKSPANSYI-NDVFTVPMSLAGLPSLSMP---LKEKTPIGLQVVGQ 449 >gi|160914433|ref|ZP_02076648.1| hypothetical protein EUBDOL_00437 [Eubacterium dolichum DSM 3991] gi|158433591|gb|EDP11880.1| hypothetical protein EUBDOL_00437 [Eubacterium dolichum DSM 3991] Length = 472 Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 153/416 (36%), Positives = 240/416 (57%), Gaps = 12/416 (2%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI +KD TKGI T A S ILD + P Y++ + KL GAV++ K +MDE MG + Sbjct: 56 GLPIVLKDNVNTKGIRTTASSRILDNYIPVYDAHIVDKLKQAGAVVIAKTSMDELGMGGT 115 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N+ +Y G V +PW GGSSGGS+AAVA + +IGTDTG SIR+PA+F G Sbjct: 116 NKNAYTGSVHNPWNPAR-----ISGGSSGGSAAAVASGAVSFAIGTDTGDSIRKPAAFNG 170 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR SR GII +A SLD G T +V+D+ + L+ +AG D+ D T V Sbjct: 171 VVGVKPTYGRISRYGIIPYASSLDHVGYFTTSVKDACVALEVLAGRDDRDMTSSLREVEA 230 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI--VEISLPHTQYA 310 Y + + G + + + + + + P I + Q + L++ GA + V ++ + Sbjct: 231 YHANVTSDLHGKRIALLENVQ-EEVRPEIKENMDQLVKKLEERGAIVDTVRMNDQLMEAL 289 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 LP YYII+ AEA++N + DG+R+G+R +G+ + ++ ++R+ GF V+ R +IG+Y L Sbjct: 290 LPVYYIIANAEATANHSNLDGIRFGMREDGESVEDVMIHSRTKGFSSYVRKRFVIGSYSL 349 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG-SMGHI 429 + + + +A+KIR LI + E+ D +L + A PL + +++ I Sbjct: 350 YAENQEKVFRKAQKIRRLIVNELAAVLER-YDAVLASASGDIA-PLSEASHDASLHTSSI 407 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + + V N +G P+ISVP+ E MP+G+ L + F E+T+F++ IE+ G Sbjct: 408 VAENYMVLGNFSGYPSISVPSGFVE-GMPIGVNLTTKAFDEQTMFNIALAIEEICG 462 >gi|299471110|emb|CBN78968.1| glutaminyl-tRNA synthase [Ectocarpus siliculosus] Length = 455 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 155/416 (37%), Positives = 228/416 (54%), Gaps = 44/416 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++++E+ +++ D+ EL ++ I+ +E S S +N ++ AR AE +D R NG Sbjct: 29 LSLAEASRKVQEGDVRPSELAEACIKQMERS-SWLNCFVTRCFDSARLEAEAADARQANG 87 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L+GIP KD F T G+ T A S L GF P Y+ST T +L G++++GK NMD Sbjct: 88 TLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMD 147 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDK-------FTPGGSSGGSSAAVAGFLCAASIGT 178 EF MGS S YG ++PW D+ PGGSSGGS+AAV+ A++G+ Sbjct: 148 EFGMGSGTLFSEYGRTLNPWSPESPGDEKNTEAPFLVPGGSSGGSAAAVSSGCSFAALGS 207 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+RQPA+F G VG+KPTYG R G+I++A SLD G++ R++ D+A++L +AG Sbjct: 208 DTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGP 267 Query: 239 DECDATCVNLPVPDYERALDQS---------------IQGMTVGIPKEYRLDYLSPTIDK 283 D D+TC+ S ++G+TVGIPKE+ ++ L + + Sbjct: 268 DSRDSTCIPAGKGRAGGGGFASDLLGAAAAGSSSSWPLEGVTVGIPKEFNVEELDAGVRE 327 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG--- 340 W+ GA +VE+ +P AL AY +++ AEASSNL+RYDG+RYG R Sbjct: 328 AWENTARTAAALGAAVVEVFMPSVPQALAAYAVLASAEASSNLSRYDGLRYGARTGQTAA 387 Query: 341 --------------KDILEMYEN---TRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 +D E++ TR+ FG EVK RI+ G +VL Y +Y Sbjct: 388 SRGEGAAVGGGGIFRDQGELHAEITRTRTAYFGDEVKRRILTGCFVLCESAYHDYY 443 >gi|170589281|ref|XP_001899402.1| Amidase family protein [Brugia malayi] gi|158593615|gb|EDP32210.1| Amidase family protein [Brugia malayi] Length = 421 Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 142/409 (34%), Positives = 210/409 (51%), Gaps = 52/409 (12%) Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ +KDC+ T+ + T S L F Y +T+ +L+ G ++GK NMDEF MG+S+ Sbjct: 43 FPVVVKDCYMTRKVRTTCASRNLSNFIAPYTATIVSRLFKEGGCLIGKANMDEFCMGTSS 102 Query: 134 ETSYYGPVISPWRSMDS--TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 Y+GPV + + TD +PGGSSGG + AV + + S+G+DTGGS R PA+FT Sbjct: 103 SKGYFGPVKNGLSDQANLGTDWRSPGGSSGGCAVAVQLGISSVSLGSDTGGSSRNPAAFT 162 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G KP+YG SR G+I SLD +I RT D LL+A+ G D D+TC++ P Sbjct: 163 GLFGFKPSYGILSRYGLIPLVNSLDCPSVIARTAADCNFLLQAMNGRDALDSTCIDAPPS 222 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + + + I GMTVGIPKEY + LS K W + L G KI E+S+P T Y++ Sbjct: 223 CFMKG--RPIYGMTVGIPKEYYNETLSSECWKGWNEAAKALAALGCKIKEVSMPSTTYSI 280 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 YY+++ A+ +SN+A + Sbjct: 281 ICYYVLAEADITSNMASH------------------------------------------ 298 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHI 429 YD ++ +A ++R LIK DF F ++G D++LTP T + PL E + G Sbjct: 299 ---YDEYFGQALRVRRLIKMDFDRVFRKEGCDILLTPVT-SGIPPLFSEISDTDGYRREC 354 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +D +T N+AG+PAISVP P+G+Q+I ++ V + Sbjct: 355 QDDFYTQPCNLAGVPAISVPFMRTADGFPVGVQIIADHLKDGIALDVAE 403 >gi|255023184|ref|ZP_05295170.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes FSL J1-208] Length = 277 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/276 (45%), Positives = 180/276 (65%), Gaps = 5/276 (1%) Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLDQ G IT+ V D+A LL+AI+G D D+T +N PV + +L I+G+ +G+PKEY Sbjct: 1 SLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERFSDSLTGDIKGLRIGVPKEYL 60 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 + + P + + + L+ GA E+SLPH++Y + +YYI++ +EASSNL+R+DGVR Sbjct: 61 GEGVDPGVKQAVLDALKTLEKLGATWDEVSLPHSEYGVASYYILASSEASSNLSRFDGVR 120 Query: 334 YGLRVEGKDIL-EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 YG R L E+Y TRS GFG EVK RIM+GTY LSS YD++Y +A++ RTLIK+D Sbjct: 121 YGYRSPNATTLEELYTKTRSEGFGDEVKRRIMLGTYALSSGYYDAYYKKAQQARTLIKQD 180 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F FE DVI+ P++PT+AF + N+ +M ND+ TV +N+AG+PAISVP Sbjct: 181 FVNVFEN-YDVIIGPSSPTTAFKIDGMINDPITM--YSNDILTVPINLAGVPAISVPCGF 237 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + +P+GLQ+IG F E L+ V E+E + + Sbjct: 238 SD-GLPVGLQIIGNYFEESLLYKVAHAFEQETTFHK 272 >gi|145296956|ref|YP_001139777.1| hypothetical protein cgR_2856 [Corynebacterium glutamicum R] gi|57158195|dbj|BAD84161.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium glutamicum] gi|140846876|dbj|BAF55875.1| hypothetical protein [Corynebacterium glutamicum R] Length = 470 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 170/483 (35%), Positives = 265/483 (54%), Gaps = 34/483 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +E+ + + ++++VEL S ++ + N Q+NAY+ KA A ++D+ Sbjct: 4 ELLKKTATEAGELIHKGEVTSVELTQSLLEHAHSLNEQVNAYVSFRDDKALEEARKADEE 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ R L G+P+GIKD T S I F ++++ L + G V+ GK Sbjct: 64 IAAGNIRGPLHGVPMGIKDNLYMADEVTTMASKIHGDFVSKHDASAVTGLKNAGVVITGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNM E+A G N + ++GPV +PW + DK PGGSSGGS AAVA + +S+GTDT Sbjct: 124 LNMHEYAWGIDNNSPHFGPVHNPW----NPDK-VPGGSSGGSGAAVASDMSFSSLGTDTA 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+S G VG+KPT+GR ++ G A SLD G +++ V D+A +L+AIAG+D Sbjct: 179 GSIRIPSSACGLVGLKPTHGRVAKFGCFPLAWSLDHIGPMSKNVADAAAMLQAIAGFDHR 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T VN+PV +Y AL +S +G+ +G+ ++Y + +++ + I L GAK+ + Sbjct: 239 DPTSVNVPVGNYSAALGESAEGLVIGVEEDYFFKDVDNEVERLVRAQIDELVSRGAKVKK 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + +P Y+ S +EAS+ + D++ R+ FG +++ Sbjct: 299 VEIPALAYSEWTELATSLSEASA-------------IHHNDLI-----NRADDFGDDIRF 340 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--E 419 +G S YL+A++ R IK++F +A VDVI+ PT P A +G Sbjct: 341 LFELGELFSSVD-----YLQAQQARRQIKQEFAQALSD-VDVIIAPTLPVMAPDIGSAVA 394 Query: 420 ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N + I + + FT N+ GLPA++VPA L +P+GLQ+IG+ F EET+ VG Sbjct: 395 DLNGKDVDLIDSFIRFTGPSNLTGLPALTVPAGL-NGGLPVGLQVIGRAFDEETVLKVGS 453 Query: 479 IIE 481 IIE Sbjct: 454 IIE 456 >gi|149238247|ref|XP_001525000.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146451597|gb|EDK45853.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 497 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 151/464 (32%), Positives = 239/464 (51%), Gaps = 69/464 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L + KD T+ ++ A SH L ++ +++TV + L GA +GK N+DEF MG Sbjct: 50 LSNLTYACKDNIVTRNTNSTAASHALYNYKSPFDATVVELLSREGATCIGKANLDEFGMG 109 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA---------------------G 169 S+N SYYG V++P+R PGGS GGS+AAV Sbjct: 110 SANRNSYYGDVVNPFRP-----GTVPGGSLGGSAAAVCIPNAKEKSNSEKEVRGGGEVGE 164 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 L ++GTDTGGS+R PA++ +G KPTYGR SR G+I +A +LD GI+ R V Sbjct: 165 ALSDFALGTDTGGSVRLPAAYCNVIGFKPTYGRISRWGVIPYAQTLDTVGILARKVDIVQ 224 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSI-------QGMTVGIPKEYRLDYLSPTID 282 + + +DE D T + + V R+ QS+ + +G+P+++ + LS T+ Sbjct: 225 RVYDVVNRFDEKDPTSLPVEV----RSKIQSVSDGQDESRKFVIGVPEQFVMRELSDTVR 280 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-- 340 + W + + G K++ I+L ALPAYY I+ +EA+SNLARYDG RYG E Sbjct: 281 EKWSEALDKFASLGHKVISINLRSICKALPAYYTIATSEAASNLARYDGTRYGYTAETPE 340 Query: 341 ---KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 +D++ + R+ G+EV+ RI++G Y LSS ++Y+ A ++R + +DF+ F Sbjct: 341 NHEQDLMRLIFQNRTESLGKEVQRRIILGNYTLSSESA-AYYMMANEVREKLAQDFSSFF 399 Query: 398 ----------------EQGVDVILTPTTPTSAFPLGKE---ENNSGSMGHIYNDVFTVAV 438 EQ D+++ PT A P +E ++ + NDVFTV Sbjct: 400 TNEHPLLCDASKKKPSEQLCDLMVCPTAMDVA-PTVEEYLSQDKESILNGYVNDVFTVPA 458 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ G+P IS+P +G+QL+GQ + + +++E+ Sbjct: 459 SLVGIPTISMPFD------GVGIQLMGQFGDDALVLQAAKLLEQ 496 >gi|289622083|emb|CBI51261.1| unnamed protein product [Sordaria macrospora] Length = 522 Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 170/468 (36%), Positives = 247/468 (52%), Gaps = 81/468 (17%) Query: 76 IGIKDCFATKG--------IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + +KD AT + T S+ L +R +E+T+ +L GA+++GK N+DEF Sbjct: 37 LAVKDNIATVSPNPEEETPLTTTCGSNFLANYRSPFEATIVTQLRSRGALLVGKTNLDEF 96 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 MGS + + +G V + +K + GGSSGGS+ AV ++GTDTGGS+R P Sbjct: 97 GMGSHSVHTAFGAVAQEGEQ-QAVNKHSAGGSSGGSAVAVVTGEADIALGTDTGGSVRLP 155 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI-------AGYDE 240 A++TG VG KP+YG SR G++ +A SLD G++ + VR L+ A +D Sbjct: 156 AAYTGVVGFKPSYGMISRYGVVPYANSLDTVGLLAKEVRPITELILGSGEAEGLWAEHDP 215 Query: 241 CDATCVNLPVPDYERALDQS---------------IQGMTVGIPKEYRLDYLSPTIDKTW 285 D T ++ P R ++ + G+P EY + LSP+I W Sbjct: 216 LDPTSLS---PGARRRCASQRDCYHSGPLSKHPYPLKNLKFGLPLEYNITELSPSIRAAW 272 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV------- 338 + L+ GA++V +SLP T++AL AYY+I+PAEASSNLA+YDG+RYG R Sbjct: 273 SAAAAKLQSLGARLVPVSLPSTRHALSAYYVIAPAEASSNLAKYDGIRYGTRFTSPTESD 332 Query: 339 ----EGKDILE--MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 EG++ + +Y R+ GFG EVK RI++G Y LSS D+++L+A+K+R L++RD Sbjct: 333 AAVSEGQEEAQGNLYARARAAGFGDEVKRRILLGAYTLSSAAMDNYFLKAQKVRRLVRRD 392 Query: 393 FT-------------EAFEQG----------------VDVILTPTTPTSAFPLGK--EEN 421 F E+FE VD +L PT P +A L + E Sbjct: 393 FNRVFALPNPLLDKPESFELSELPETVGLEDKWGPTEVDFLLCPTAPMTAPKLEEVLSEE 452 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL---GLQLIGQ 466 + NDVFTV ++AGLPAISVP + E+K GLQLIGQ Sbjct: 453 EKDPVNAYMNDVFTVPASLAGLPAISVPMRVQEEKEGTGMAGLQLIGQ 500 >gi|213406291|ref|XP_002173917.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Schizosaccharomyces japonicus yFS275] gi|212001964|gb|EEB07624.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Schizosaccharomyces japonicus yFS275] Length = 487 Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 162/478 (33%), Positives = 255/478 (53%), Gaps = 35/478 (7%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 ELV Y A+ + N+++NA ++ + A + +I G L+G + IK+C T Sbjct: 4 ELVTKYANAV-SKNTRINALTKLRSLDALKKEATALSKI--GCELPLKGRILTIKECICT 60 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 K + S IL+G++ +++T+ + L D GA++LG NMDEFAMG S+ +G ++P Sbjct: 61 KEDTATSSSKILEGYQSPFDATIVKLLRDAGALILGSTNMDEFAMGVSSNNELFGQTVNP 120 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 DS F GGSSGG++AAVA +C ASIGTDTGGSIR P++FTG G KPTYGR S Sbjct: 121 LYDHDS---FVAGGSSGGAAAAVAAGMCHASIGTDTGGSIRLPSAFTGVFGFKPTYGRIS 177 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 R G+I FA SLD GI ++ + + +D+ D +C+ + +D I+ Sbjct: 178 RFGVIPFANSLDTIGISGDSIDSVRRIFHVLNQHDKNDLSCM---TNNQRTKVDHLIKNS 234 Query: 265 T------VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + VGIP + + L P I W + I+ L++AG + E+ LP++ YAL Y+ ++ Sbjct: 235 SSNEKPVVGIPTNWNVAELEPAILDKWNECIAKLEEAGCTVKEVYLPNSSYALNIYFAVA 294 Query: 319 PAEASSNLARYDGVRYGLRVEGKDI---LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 AE SNLARYDG +G + ++ L + E RS+ G+EV+ R+++G Y L Sbjct: 295 YAEGLSNLARYDGAMFGQHLVDEETGRRLSVKE-IRSMLVGEEVQKRVLLGAYSLRYGSE 353 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQ-----------GVDVILTPTTPTSAFPLGKEENNSG 424 + +A+++R I+R+F +AF VD I+ P + + +G N Sbjct: 354 KGLFKKAQQVRREIQREFNKAFRMQNALCHDDECGTVDFIVAPVSLSFCPKIGASSPND- 412 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D + NMAG P++SVP + +GLQ+I Q +E ++ + Sbjct: 413 ----LITDALLIPANMAGAPSMSVPCGKTPEGFDVGLQVIAQFGDDERCIQYSDLVHR 466 >gi|289192270|ref|YP_003458211.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus sp. FS406-22] gi|288938720|gb|ADC69475.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus sp. FS406-22] Length = 434 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 172/459 (37%), Positives = 241/459 (52%), Gaps = 30/459 (6%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 VE V+ Y+ IE N +NA IEV + A++ +K + L G I +K Sbjct: 3 VERVEEYLDRIEKINKDINALIEVNPDRVLEEAKKLEKDE-KAKKKPLYGKLIVVKANIN 61 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 +G S L+ + Y++TV +K+ +NG +++G NMDEFA GSS ETSYYGP + Sbjct: 62 VEGYTISCASKTLENYIAPYDATVIEKIKENGGLIIGIANMDEFACGSSGETSYYGPTKN 121 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P R+ D PGGSS GS+AAVA LC ++G+DTGGSIR PAS G VG KP+YG Sbjct: 122 P-RAKDRI----PGGSSSGSAAAVAADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVV 176 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 SR G+ A S DQ G +T+T D+ +L I G D D T V +E+ + I+G Sbjct: 177 SRYGLCDLAMSFDQIGPLTKTAEDALLLTNIIKGKDLRDTTTVE--TKPFEK---RDIKG 231 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 VG+ KE+ +D I ++GI KD G +IVE+S + ALP YY+I+ E Sbjct: 232 FKVGVVKEF-MDVADEKIRDKIEKGIEVFKDLGCEIVELSYKYVDLALPTYYLINYVEFF 290 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 S+ RYDG RYG ++E G+EV RIMIG+ + +Y A Sbjct: 291 SSTRRYDGRRYGYKIEEV-------------CGEEVLRRIMIGSMISQKEYSGKYYKNAL 337 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 + R L+K + + + VD+I+ T P LG++ M DV TV N+ GL Sbjct: 338 RARNLMKNEMIKIMKD-VDIIVGATVPKLPHKLGEKLT---PMEMYSYDVLTVLANICGL 393 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A VP +P+GLQ+ G+PF +E + S EK Sbjct: 394 CAGVVPCGDI-NGIPVGLQIQGKPFEDEKVLSAMIAFEK 431 >gi|50302985|ref|XP_451430.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640561|emb|CAH03018.1| KLLA0A09845p [Kluyveromyces lactis] Length = 469 Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 163/455 (35%), Positives = 250/455 (54%), Gaps = 30/455 (6%) Query: 29 SYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH 88 S +Q I S+ N + V ++A + E DK + L IKD ATK + Sbjct: 8 SRLQQIPEIQSRYNVFT-YVNERASSQLESIDKNTTAD--KPLNYTLAAIKDNIATKNMP 64 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 + S ILDG+ +++TV L + G V+ GK NMDEF MGS+ S++GP +P Sbjct: 65 STCASKILDGYMSPFDATVVSLLLEAGTVIAGKANMDEFGMGSAGIHSHFGPTFNPL--F 122 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 D D+ GGSS GS+AAVA + ++GTDTGGS+R PAS+T T G KP+YGR SR G+ Sbjct: 123 DHKDRVIAGGSSSGSAAAVASGVVDFALGTDTGGSVRLPASYTSTFGFKPSYGRLSRHGV 182 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 IS+A SLD G+ + + + +D+ D T ++ + +L + + +GI Sbjct: 183 ISYAQSLDTVGVFANDLSMIDRVFSLLDKHDKKDPTSLSEELRHKFTSLTTKRKTLRIGI 242 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 P+E+ + + I L G ++ +S+P + AL YY +SPAEA SNL+R Sbjct: 243 PEEFSQESVPAEFRAAMTAIIKRLMKKGHEVYPVSIPSVKNALSIYYTLSPAEAVSNLSR 302 Query: 329 YDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 YDGVRYG R E D+ + ++ TRS FG EV++RI++G Y L S + ++Y++A+K+R Sbjct: 303 YDGVRYGYRAES-DVEDGTLFTPTRS-AFGPEVQNRIILGNYNLCSESFKNNYIKAQKLR 360 Query: 387 TLIKRDFTEAF------------EQGVDVILTPTT---PTSAFPLGKEENNSGSMGHIYN 431 + DF AF + GVD++L+ T+ PT+ + EEN + +I N Sbjct: 361 VQLINDFDRAFRFPNVLSGNSVNKDGVDIMLSLTSTSFPTTYDEVVSEENKNPLNTYI-N 419 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 D+FT+ +++ GLP ++VPA G+Q+ Q Sbjct: 420 DIFTMPMSLCGLPTMTVPAGHA-----FGIQVFSQ 449 >gi|54023173|ref|YP_117415.1| putative amidase [Nocardia farcinica IFM 10152] gi|54014681|dbj|BAD56051.1| putative amidase [Nocardia farcinica IFM 10152] Length = 472 Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 169/487 (34%), Positives = 257/487 (52%), Gaps = 39/487 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +SE+ + + + +S VEL +S + + + A+ V A+ A A + + I G Sbjct: 6 LTLSEASEEIAAGRLSPVELTESVLDQVARHEPVIGAFSVVTAEAATVQAARAAEEIAAG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L GIPIG+K G+ T + S G P ++ V ++L GAV++G+ + Sbjct: 66 RRRGPLHGIPIGVKALVNRAGVETTSSSRSRAGHVPEDDAAVVERLDRAGAVLVGQTHTH 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G T+ +PW PGGSSGGS AA+A + +IGTDTGGSIR Sbjct: 126 EFAYGVVTPTTR-----NPWHP-----DHIPGGSSGGSGAALAARMVLGAIGTDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++ G GIKPTYGR SR G S + SLD G + RTV D+A+LL +AG+D D Sbjct: 176 IPSALCGVTGIKPTYGRVSRYGTTSLSWSLDHIGPMGRTVADNALLLGELAGFDPRDPAT 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V+ VPDY +L ++GMTVG+P Y D++ P ++ ++ + L DAGA + E++LP Sbjct: 236 VDAEVPDYRASLVADVRGMTVGVPTNYFFDHIDPEVEAAYRAAVHVLADAGAHVREVALP 295 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + +P Y + AEAS+ + +R R+ + +V+ + Sbjct: 296 LPEQYMPVEYAVFVAEASAY--HQEALR----------------ERADRYEADVRLMLEA 337 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NN 422 G VL+ + Y+RA + RTL+++ + E F+ G+D +L PT P +A P G+ E + Sbjct: 338 GEMVLA-----TDYIRALRARTLLQQGWREMFD-GLDAVLAPTVPRAAAPAGQGEFTWPD 391 Query: 423 SGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S I V T A N+ GLPA+SVP +P+G+Q+IG+PF E T+ VG E Sbjct: 392 GMSEPLINAYVRTCAPGNLTGLPAMSVPCGFTATGLPIGMQIIGKPFDEATVLRVGHTYE 451 Query: 482 KEAGYFR 488 + R Sbjct: 452 SATDWTR 458 >gi|256811327|ref|YP_003128696.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus fervens AG86] gi|256794527|gb|ACV25196.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus fervens AG86] Length = 434 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 170/459 (37%), Positives = 239/459 (52%), Gaps = 30/459 (6%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 VE V+ Y+ IE N +NA IEV +K A++ +K + L G I +K Sbjct: 3 VEKVEEYLDRIEKINKDINALIEVKPEKVLEEAKKLEKDE-KAKKKPLYGKIIAVKANIN 61 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 + S L+ + Y++TV +K+ +NG +++G NMDEFA GSS ETSY+GP + Sbjct: 62 VEDYTISCASKTLENYVAPYDATVIEKIKENGGLIIGIANMDEFACGSSGETSYFGPTKN 121 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P R+ D PGGSS GS+AAVA LC ++G+DTGGSIR PAS G VG KP+YG Sbjct: 122 P-RAKDRI----PGGSSSGSAAAVAADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVV 176 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 SR G+ A S DQ G +T+T D+ +L I G D D T V + E + + I+G Sbjct: 177 SRYGLCDLAMSFDQIGPLTKTAEDALLLTNVIKGKDVRDTTTV-----ETEEFVKRDIKG 231 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 VG+ KE+ ++ I + GI KD G +IVE+S + ALP YY+I+ E Sbjct: 232 FKVGVVKEF-MEVTDEKIRDKIENGIEVFKDLGCEIVELSYKYIDLALPTYYLINYVEFF 290 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 S RYDG +YG ++E G+EV RIMIG+ + +Y A Sbjct: 291 SATRRYDGRKYGYKIEEV-------------CGEEVLRRIMIGSMISQKEYSGKYYKNAL 337 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 K R L+K + + + VD+I+ T P LG++ M DV TV N+ GL Sbjct: 338 KARNLMKNEMIKIM-KDVDIIVGATVPKLPHKLGEKLT---PMEMYSYDVLTVPANICGL 393 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A VP +P+GLQ+ G+PF +E + S EK Sbjct: 394 CAGVVPCGDI-NGIPVGLQIQGKPFEDEKVLSAMIAFEK 431 >gi|303244497|ref|ZP_07330832.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanothermococcus okinawensis IH1] gi|302485195|gb|EFL48124.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanothermococcus okinawensis IH1] Length = 431 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 171/465 (36%), Positives = 249/465 (53%), Gaps = 38/465 (8%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK--RIINGDARDLEGIPIGIKDC 81 V+ Y++ IE SN +NAY+++ + AEE +K ++ N + L G I IK Sbjct: 3 VDRAHEYLEKIEKSN--INAYVQINKDRVLKEAEELEKNEKLKN---KPLYGKLIAIKSN 57 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G S L+ + Y++TV +K+ G +++G NMDEFA GSS ETSYYG Sbjct: 58 INVNGYTISCASKTLENYVSSYDATVVKKIKSQGGLVIGMTNMDEFACGSSGETSYYGAT 117 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +P ++ D+ PGGSS GS+AAVA LC ++G+DTGGSIR PAS G VG KP+YG Sbjct: 118 KNP----NAEDRI-PGGSSSGSAAAVAADLCDMALGSDTGGSIRNPASHCGVVGFKPSYG 172 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 SR G+ A S DQ G +T+ D+ +L I G D D+T V+ P +E+ ++I Sbjct: 173 VVSRQGLCDLAMSFDQIGPLTKNAEDAFVLTNVIKGLDISDSTTVD--TPKFEK---KNI 227 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 + +GI KE+ +D I ++GI KD G KIVE++ +T ALP YY+I+ E Sbjct: 228 ENYKIGIVKEF-MDVSDEKIRNKIEEGIEVFKDLGCKIVELNYNYTDLALPTYYLINYVE 286 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 S +YDG RYG +E G+EV RI+IG ++ +Y + Sbjct: 287 FFSATRKYDGRRYGYPIEEV-------------CGEEVLRRILIGKHISEKEFSGKYYKK 333 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 A + R L+K + + F++ VDVI +PT P +G+E M DV TV N+ Sbjct: 334 ALQARRLMKMEMLKLFKE-VDVIASPTVPKLPHKIGEELT---PMEMYAYDVLTVPTNIC 389 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 G+ A V +P+GLQ+ G+PF +E + S +IE E Y Sbjct: 390 GMCAGVVKCGDI-NGIPVGLQIQGKPFDDEKVLSA--MIEFEKNY 431 >gi|330917091|ref|XP_003297674.1| hypothetical protein PTT_08164 [Pyrenophora teres f. teres 0-1] gi|311329510|gb|EFQ94232.1| hypothetical protein PTT_08164 [Pyrenophora teres f. teres 0-1] Length = 403 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 145/369 (39%), Positives = 214/369 (57%), Gaps = 37/369 (10%) Query: 124 MDEFAMGSSNETSYYGPV--ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 MDEF MGS + S++GPV I P S + G + +S V A++GTDTG Sbjct: 1 MDEFGMGSHSTNSHFGPVKMIKPSGGEFSAGGSSGGSAVAVASDQVW-----AALGTDTG 55 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PA++TG VG KP+YG SR G+I++A SLD GII R + +A+ D Sbjct: 56 GSVRLPAAYTGVVGFKPSYGLLSRWGVIAYANSLDTVGIIGRDTLAVRHIFRALNVEDVN 115 Query: 242 DATCVNLPVPDYERALDQSIQG-----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D T +P+ R +++ I+G + +GIP +Y +D L P + + W + + + G Sbjct: 116 DPTS----LPNALR-INKKIRGAKGKSLRIGIPLDYNIDSLQPRVKELWIRSLRGMWKYG 170 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE---MYENTRSI 353 + I LP TQ AL AYY+++PAEASSNLA+YDGVR+G R EG D ++ TR Sbjct: 171 HTLHPIRLPTTQQALSAYYVLAPAEASSNLAKYDGVRFGSRAEGTDGTRDSVLFARTRGQ 230 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF---------------E 398 GFG EV+ RI++GT+ LS+ D+++++A+K+R L+++DF F Sbjct: 231 GFGPEVQRRILLGTFSLSAEAIDNYFIQAQKVRRLVQQDFNSVFATQNPLFDTKDDWDES 290 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM- 457 VDVI+ PT P++A PL + E + NDVFTV ++AGLPAI++P + Sbjct: 291 DKVDVIVCPTAPSTAPPLSEVETQDPIQSYT-NDVFTVPASLAGLPAITMPTRNNNRNED 349 Query: 458 PLGLQLIGQ 466 P+G+Q+IGQ Sbjct: 350 PIGIQIIGQ 358 >gi|145342453|ref|XP_001416197.1| Glutamyl-tRNA(Gln) amidotransferase subunit A, probable [Ostreococcus lucimarinus CCE9901] gi|144576422|gb|ABO94490.1| Glutamyl-tRNA(Gln) amidotransferase subunit A, probable [Ostreococcus lucimarinus CCE9901] Length = 554 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 169/482 (35%), Positives = 258/482 (53%), Gaps = 24/482 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 L+S ISAVEL +Y+ I + ++ + ++++V A A++ D RI G D L GI Sbjct: 63 LKSGKISAVELTSAYLDRIRSIDNTIGSFVQVDFAGAIEQAKQIDSRIATGQDLHILAGI 122 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD + + T A S++L + Y++ V L G+V++GK NMDEF MGS+ E Sbjct: 123 PLAIKDNICHQDLSTTAGSNLLRAHQSSYDAEVVTVLKGCGSVLIGKTNMDEFGMGSTTE 182 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 TS +PW PGGSSGGS+AAVAG +CA ++G+DTGGSIRQPA+F G V Sbjct: 183 TSANKATHNPWDL-----SRVPGGSSGGSAAAVAGQMCAGALGSDTGGSIRQPAAFCGVV 237 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---------ATC 245 G+KPTYG SR G+I++ + D G I TV+D + + A+ ++ Sbjct: 238 GLKPTYGAISRHGLIAYCSTFDTIGPIGPTVQDVSYIFGALQKDGNIKKMRDTSLRHSSI 297 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + +P + +G + E + ++ + ++ + ++ G + +S Sbjct: 298 IETSLPPQASLSCRPYEGRRFAVIAEAIDEGVADEVKFSFFDSVRHIESLGGVVDLVSCK 357 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQEVKHRI 363 Q LPAYY+++ +EASSNLAR+DGVR G R + + + + R G EV RI Sbjct: 358 TFQMGLPAYYVMAVSEASSNLARFDGVRVGNREASYESVTDSLVGHFRHSYLGPEVLRRI 417 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++GTY LSS D +Y RA+ + L++ + Q D +LTP TP A+ G + + Sbjct: 418 LMGTYTLSSGYSDEYYARAKYAQRLVRDELISYLSQ-YDALLTPATPDVAYTRGSKIMDP 476 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREETLFSVGQI 479 M D+ TV VN++GLPAI V + + +P+GLQ IG+ F E L + I Sbjct: 477 LQM--YTGDLMTVNVNLSGLPAIVVRSGVLTVAEGTHLPIGLQFIGKHFGEGELLQIAHI 534 Query: 480 IE 481 E Sbjct: 535 FE 536 >gi|15669349|ref|NP_248154.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanocaldococcus jannaschii DSM 2661] gi|2492836|sp|Q58560|GATA_METJA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|1500015|gb|AAB99163.1| amidase [Methanocaldococcus jannaschii DSM 2661] Length = 434 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 170/459 (37%), Positives = 241/459 (52%), Gaps = 30/459 (6%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 VE V+ Y+ IE N +NA IEV +K A++ +K + L G I +K Sbjct: 3 VERVEEYLDRIEKINKDINALIEVKPEKVLEEAKKLEKDE-KAKKKPLYGKIIVVKANIN 61 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 +G S L+ + Y++TV +K+ +NG +++G NMDEFA GSS ETSY+GP + Sbjct: 62 VEGYTISCASKTLENYIAPYDATVIEKIKENGGLIIGIANMDEFACGSSGETSYFGPTKN 121 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P R+ D PGGSS GS+AAV+ LC ++G+DTGGSIR PAS G VG KP+YG Sbjct: 122 P-RAKDRI----PGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVV 176 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 SR G+ A S DQ G +T+T D+ +L I G D D T V +E+ + I+G Sbjct: 177 SRYGLCDLAMSFDQIGPLTKTAEDALLLTNIIKGKDLRDTTTVE--TKPFEK---KDIKG 231 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 VG+ KE+ +D I ++ I KD G +IVE+S + ALP YY+I+ E Sbjct: 232 FKVGVVKEF-MDVADEKIRDKVEKAIEVFKDLGCEIVELSYKYVDLALPTYYLINYVEFF 290 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 S+ RYDG RYG ++E G+EV RIMIG+ + +Y A Sbjct: 291 SSTRRYDGRRYGYKIEEV-------------CGEEVLRRIMIGSMISQKEYSGKYYKNAL 337 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 K R L++ + + + VD+I+ T P LG++ M DV TV N+ GL Sbjct: 338 KARNLMRNEMIKIM-KDVDIIVGATVPKLPHKLGEKLT---PMEMYSYDVLTVPANICGL 393 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A VP +P+GLQ+ G+PF +E + S EK Sbjct: 394 CAGVVPCGDI-NGIPVGLQIQGKPFEDEKVLSAMIAFEK 431 >gi|150864208|ref|XP_001382940.2| amidase (GATA)-like protein [Scheffersomyces stipitis CBS 6054] gi|149385464|gb|ABN64911.2| amidase (GATA)-like protein [Scheffersomyces stipitis CBS 6054] Length = 509 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 163/441 (36%), Positives = 245/441 (55%), Gaps = 42/441 (9%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G KD T + S IL +R +++TV L G+ +LGK N+DEF Sbjct: 75 AGSLSGTTYIAKDNIVTTHEFSTGASRILSNYRSPFDATVVLLLDAAGSTLLGKSNLDEF 134 Query: 128 AMGSSNETSYYGPVISPWRSMD--STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 MGSS S+YG ++P S++ + GGSSGGS+AAVAG L ++GTDTGGS+R Sbjct: 135 GMGSSTTNSHYGTTLNPLYSVEVETGKAHISGGSSGGSAAAVAGKLANFALGTDTGGSVR 194 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 QPAS+ GTVG KPTYGR SR G+IS+A +LD GII+ + + + YD+ D T Sbjct: 195 QPASYCGTVGFKPTYGRISRWGVISYAQTLDTVGIISDDIHTVEKVYHVLDKYDDKDPT- 253 Query: 246 VNLPVPDYERAL------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 +LP D +L D + +TVG+P+E+ + LS + + W +S L+D G + Sbjct: 254 -SLP-DDIRNSLKSKCSEDVNSTSLTVGVPREFVVGDLSQEVKEVWFSVLSQLQDMGHTV 311 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN----TRSIGF 355 +S+P + +L +YY ++ AEA+SNL+RYDGVRYG E D+ E + R+ GF Sbjct: 312 KIVSVPSIKQSLSSYYTLATAEAASNLSRYDGVRYGQTTE--DLQEKAHDLIVANRTNGF 369 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ---------------- 399 G EV+ RI++G Y LSS D HY++A ++R + +F + F Sbjct: 370 GPEVQRRILLGNYTLSSESGD-HYIKATQVREKLVNEFNQVFNLRHVFSNDTNVDKETSG 428 Query: 400 GVDVILTPTTPTSAFPLGK--EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 D+++ PT SA L + ++N + + ND+ TV ++AGLP IS+P + Sbjct: 429 RCDILVAPTAINSAPTLEEYHQQNETNFLNDYVNDILTVPASLAGLPTISIP------RG 482 Query: 458 PLGLQLIGQPFREETLFSVGQ 478 G+Q++GQ ++T+ V + Sbjct: 483 KHGIQIMGQFGADQTVLDVSK 503 >gi|116193423|ref|XP_001222524.1| hypothetical protein CHGG_06429 [Chaetomium globosum CBS 148.51] gi|88182342|gb|EAQ89810.1| hypothetical protein CHGG_06429 [Chaetomium globosum CBS 148.51] Length = 524 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 165/468 (35%), Positives = 240/468 (51%), Gaps = 64/468 (13%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD AT T S L +E+T+ ++L GA ++GK N+DEF MGS + Sbjct: 58 LAVKDNIATTTHPTTCASAFLTTHHSPFEATIVRQLRARGARLVGKTNLDEFGMGSHSTH 117 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S G V R D+++ GGSSGGS+ VA ++GTDTGGS+R PA++ G VG Sbjct: 118 SAAGAVAQSPRGDAGDDEYSAGGSSGGSAVVVAAGEADVALGTDTGGSVRLPAAYCGVVG 177 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITR--------TVRDSAILLKAIAGYDECDATCVN 247 KP+YG SR G++ +A SLD G++ R V D+ D D T ++ Sbjct: 178 FKPSYGMLSRFGVVPYANSLDTVGLLARGVGRIRELVVGDAGGGGGLWKEADSRDPTSLS 237 Query: 248 --------LPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA- 295 + Y R + ++G+ GIP EY ++ L I W + L++ Sbjct: 238 EAARGRCVVGREGYGREQKEGGDVLRGLRFGIPLEYNIEELDSGIRDAWAKAAKILQEEY 297 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE------MYEN 349 GA++V +SLP T++AL AYY+I+PAEASSNLA+YDGVRYG R D +Y Sbjct: 298 GARVVPVSLPSTRHALAAYYVIAPAEASSNLAKYDGVRYGTR--DTDAASDAAGGVLYAA 355 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE----------- 398 +R GFG EVK RI++G+Y LSS D+++++A+++R L+++DF F Sbjct: 356 SRGKGFGDEVKRRILLGSYTLSSEAMDNYFIKAQRVRRLVRKDFNRVFALDNPLHDRETF 415 Query: 399 -----------------QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 + VD +L PT PT A L + + NDVFTV ++A Sbjct: 416 DLTDLDESIEMEDKWGPEEVDFLLCPTAPTLAPKLADVMKQT-PLDAYMNDVFTVPASLA 474 Query: 442 GLPAISVPAA-------LCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 GLPAIS+P + K GLQLIGQ + + L +V + K Sbjct: 475 GLPAISIPMPVTLETENVAGKPGTAGLQLIGQYWDDARLLAVADAVSK 522 >gi|148657191|ref|YP_001277396.1| amidase [Roseiflexus sp. RS-1] gi|148569301|gb|ABQ91446.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Roseiflexus sp. RS-1] Length = 463 Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 157/495 (31%), Positives = 262/495 (52%), Gaps = 35/495 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + ++E+ D L ++I+AVEL +++++ I+ ++++N++I + + A A +D Sbjct: 1 MSDLTHLTIAEAADLLARREIAAVELTEAHLRRIDAHDARLNSFITITSDHALTQARAAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G R L GIP+ +KD + T GI T A S P ++ L+ GAV+L Sbjct: 61 AELTRGIRRGPLHGIPLALKDLYDTAGIRTTAGSTFFADRVPDTDARAVTLLYQAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNM E+A+G +N +YGP +PW T SSGG++AA+A LC ++G+D Sbjct: 121 GKLNMHEWALGVTNINPHYGPSRNPWDPSRITGG-----SSGGAAAALAAGLCMGALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PAS G VG+KPT+GR S G+I + +LD AG + RTV D+A+LL+AIAGYD Sbjct: 176 TGGSIRIPASLCGIVGLKPTFGRVSLQGVIPLSWNLDHAGPMARTVTDAALLLQAIAGYD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V LPV + LD + G + + + P + ++ + ++ GA++ Sbjct: 236 PDDPVSVALPVDNLLATLDAGVTGWRIALATDAHFGEADPEVISAVRRAATVFEELGARV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + L + A +++ ++A++ +D L + + FG +V Sbjct: 296 EAVDLSQGREAAQMNALMTTSDAAAF--------------HRDRLRDHPHR----FGADV 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R+ G S + Y+ AR+ ++ +R F+Q D++LTP TP +A P+ + Sbjct: 338 LARMERGAQFTS-----TEYILARRFQSEWRRRLERLFDQ-FDLLLTPATPITA-PVIEG 390 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ + + T N+AGLPA+S+P L +P+GLQ++ P+ E + G+ Sbjct: 391 LDSIEAARQLTR--CTAPFNLAGLPALSLPCGLSAAGLPIGLQIVAAPWNEARVLRAGRA 448 Query: 480 IEKEAGYFR--PHKW 492 E + R P W Sbjct: 449 FENATQWHRQTPPGW 463 >gi|150402680|ref|YP_001329974.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcus maripaludis C7] gi|166217682|sp|A6VH97|GATA_METM7 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|150033710|gb|ABR65823.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanococcus maripaludis C7] Length = 431 Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 175/463 (37%), Positives = 245/463 (52%), Gaps = 40/463 (8%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA---RDLEGIPIGIKDCFA 83 V Y++ IE S+ +NA+I+V ++K AEE +K DA + L G + +K Sbjct: 6 VSDYLEKIEKSD--VNAFIDVNSEKVLKEAEELEKN----DALKNKPLYGKIVAVKSNIN 59 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 KG S LD + Y++TV +KL GA+++G NMDEFA GSS ETSY+GP + Sbjct: 60 VKGYKISCASKTLDNYIGTYDATVVKKLRSQGALIVGMTNMDEFASGSSGETSYFGPTKN 119 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P +MD PGGSS GS+AAVA LC +IG+DTGGSIR PAS G VG KP+YG Sbjct: 120 PA-AMDRI----PGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVV 174 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 SR G+ A S DQ G +T+ D+ +L AI G D D+T +L P +E+ + I Sbjct: 175 SRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDST--SLETPKFEK---KDISN 229 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 VG+ KE+ +D I ++GI KD G KIV++S + ALP YY+I+ E Sbjct: 230 YKVGVVKEF-MDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFF 288 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 S +YDG RYG +E G+EV RI+IG ++ +Y +A Sbjct: 289 SATRKYDGRRYGEFIEE-------------ACGEEVLRRILIGKHISEQEFSGKYYKKAL 335 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 + R +K++ F D+I+ PT P LG EN S + Y DV TV N+ G+ Sbjct: 336 QARKSMKKEMLGLFNSA-DLIVGPTVPKLPHKLG--ENLSPMEMYAY-DVLTVPTNICGI 391 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + V +P+GLQ+ G P +E + S +IE E Y Sbjct: 392 CSGVVRCGNIS-GVPVGLQIQGAPLEDEKVLSA--MIEFEKNY 431 >gi|256076690|ref|XP_002574643.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Schistosoma mansoni] gi|238659854|emb|CAZ30876.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Schistosoma mansoni] Length = 540 Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 170/461 (36%), Positives = 235/461 (50%), Gaps = 38/461 (8%) Query: 63 IINGDARDL-EGIPIGIKDCFATK----GIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 + N D DL IP+ +KD F + T S L+ F Y++ V L +GA Sbjct: 68 VTNPDTPDLMTSIPVVVKDNFCVNYRRLPLKTTCASKSLENFCSPYDAAVVSSLLHSGAF 127 Query: 118 MLGKLNMDEFAMGS-SNETSYYGPVISPWRSMDS-TDKFTPGGSSGGSSAAVAGFLCAAS 175 ++GK NMDEFAMG S +++ GPV++PW + + GGSSGGS+AAVA LC AS Sbjct: 128 IMGKSNMDEFAMGCGSTDSAVAGPVVNPWSEKAAGKTRLISGGSSGGSAAAVAAGLCLAS 187 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 I +DTGGS R PA++ G VG+KPTY SR G+I +LD II +V D A +L + Sbjct: 188 IASDTGGSARLPAAYCGVVGLKPTYTLVSRHGLIPLVNTLDVPAIIAPSVSDVACVLASW 247 Query: 236 AGYDEC-----DATCVNLPVPDYERA-----------LDQSIQG--MTVGIPKEYRLDYL 277 DATC LP R LD + + + +GIP EY + L Sbjct: 248 LSPTNNFARTGDATCSQLPHSFLTRMYNELQDLAKGDLDSTSKDAPLRIGIPLEYHVPGL 307 Query: 278 SPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 I W WL D + V+ + LPHT A Y ++ E +SN+ARYDG++YG Sbjct: 308 QEEICSMWDTVAGWLADHLSCSVQLVRLPHTPMATTVYSVLCATEVASNMARYDGLKYGF 367 Query: 337 RVEG----------KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 + ++ + Y TRS+GFG V+ RI G + L H AR++ Sbjct: 368 SITKLSNHHEDSLLRNSVTQYSATRSLGFGDVVQGRIFAGNFFLLRDQQCRHLAAARRLW 427 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 LIK DF + FE VD ILTP +P+ + + +DV TVAVN++GLPAI Sbjct: 428 RLIKEDFMKVFE-SVDFILTPVSPSLPISIDEFSKFDNRTRTTLDDVCTVAVNLSGLPAI 486 Query: 447 SVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 S P L + +P+ LQLIG F E L S+ +E +A + Sbjct: 487 SFPVGLSPTRGLPISLQLIGPYFSECQLLSLVAKLEHQACF 527 >gi|323342973|ref|ZP_08083204.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463037|gb|EFY08232.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Erysipelothrix rhusiopathiae ATCC 19414] Length = 450 Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 156/457 (34%), Positives = 243/457 (53%), Gaps = 22/457 (4%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG 86 +D I ++ N ++NA + V E +D I G I +KD K Sbjct: 5 IDEIIGNLKKENERLNAIVSFVDPN-----EVTDGLI--------SGWDIALKDNINMKD 51 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 T A +L + Y + V +L D GAV++ K +MDE MG +N ++ GPV +P+ Sbjct: 52 TLTTASCKLLSNHKSIYNAHVVDRLLDEGAVIVAKTSMDELGMGGTNLSAITGPVYNPY- 110 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 D T GGSSGGS+A V A++G+DTG S+R+PA++ G VG+KPTYGR SR Sbjct: 111 --DITR--ISGGSSGGSAALVGAKAVRAALGSDTGDSVRKPAAYCGAVGVKPTYGRISRY 166 Query: 207 GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTV 266 G+I +A SLD G T+ V D+A LL+ +AG D+ D T PV Y + LD ++G + Sbjct: 167 GVIPYASSLDHVGYFTQNVADAACLLEVLAGRDDRDMTSSMEPVVSYSKLLDMDLEGKRI 226 Query: 267 GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT--QYALPAYYIISPAEASS 324 GI K + + T+ Q L+ GA +VE ++ T + LP Y +IS +EA + Sbjct: 227 GIFKTVEDAIENEAVKATFVQFKEKLEAQGAILVEKTIEKTLMRTMLPVYSVISNSEAVA 286 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 N A DGVR+GL EG + E+ +NTR+ GF +K R + G + L + +A+K Sbjct: 287 NHANLDGVRFGLSQEGDSLEEIMKNTRTNGFSSLIKRRFIFGAFALDDANQKEVFDQAKK 346 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 +R L+ + FE VD+++T + T A + + + S ++ + V N +G P Sbjct: 347 VRRLLVNAYASCFED-VDIMVTLASGTVAPKVENQLMDELSDAYLIGENHMVINNFSGYP 405 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++++P L + +P+G+ + QPF E +F+ GQ E Sbjct: 406 SMTLPLDLVD-GLPVGINISTQPFTEAKMFAYGQAFE 441 >gi|325003669|ref|ZP_08124781.1| Amidase [Pseudonocardia sp. P1] Length = 485 Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 162/472 (34%), Positives = 249/472 (52%), Gaps = 35/472 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGI 78 ++S VELV+ ++ IE + NA+I V + A A A S+ I G L G+P+ + Sbjct: 31 EVSPVELVERSLRRIEQI-AGTNAFISVDSDDALAVARASETMISAGHRIGPLHGVPVAL 89 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD + + T A S IL RP ++TVT++L GA+++GK NM EFA G ++ +Y Sbjct: 90 KDNVSVRDKPTTAGSAILADHRPAEDATVTRRLRSAGAIIVGKTNMHEFAWGGTSANPHY 149 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G V +PW + PGGSSGGS AVA C ++GTDTGGSIR PA+ G G++P Sbjct: 150 GFVTNPWDT-----GRMPGGSSGGSGVAVATRACFGALGTDTGGSIRLPAALNGITGLRP 204 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T GR S G+I A S+D G + RT D A++ A+AG+D DA + DY R L Sbjct: 205 TIGRVSNAGVIPLAWSMDTVGPMARTAADCAVMFTALAGHDPADAGSADRAGEDYSRDLG 264 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + G+ VGI + Y L ++ P +DK + + L GA+ E+S+ + + A + Sbjct: 265 AGLDGLRVGIIEGYSLHHVQPAVDKALRAALDVLVAGGARTSEVSIADIEGNISAQLTVE 324 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 E S+ R+ LR D +G +V+ + G + +++ Sbjct: 325 ACEPSTYHQRW------LRERPDD------------YGDDVRLLLEAGEMLPATQ----- 361 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--EENNSGSMGHIYNDV--F 434 YL+A++ RTL++ A + VD+++ PT P +A PLG+ E + G + + + F Sbjct: 362 YLQAQRYRTLLRSQTLAALSR-VDLLVCPTLPFTATPLGEVTVEIDPGRAEDMLSAIMQF 420 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 T ++ GLPAISVP + +P+G+QLIG+PF E TL + G+ Sbjct: 421 TGLPSLTGLPAISVPCGFDDAGLPIGMQLIGRPFAESTLLRAAAGFQAGTGF 472 >gi|303285246|ref|XP_003061913.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456324|gb|EEH53625.1| predicted protein [Micromonas pusilla CCMP1545] Length = 602 Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 172/478 (35%), Positives = 236/478 (49%), Gaps = 66/478 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 ++G + +KD G T A S L G+ P +TV +L GAV+L K NMDEF MG Sbjct: 87 VDGAVVAVKDNLVVPGAPTTASSRALRGYEPPMIATVADRLARVGAVLLAKTNMDEFGMG 146 Query: 131 SSNETSYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S +G +SPW + + GGSS G++ AVA + AS+G+DTGGS+R Sbjct: 147 SHGVHGVHGACVSPWMARGQEETLRGPRCAGGSSAGAAVAVAAGVVHASVGSDTGGSVRL 206 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA++ G VG KP+YG SR G++ + SLD G ITR V D+A LL G D DAT V Sbjct: 207 PAAYNGLVGYKPSYGVVSRWGLVPYCASLDTVGFITRDVADAATLLDITQGIDPLDATSV 266 Query: 247 NLPVPDYERALDQ-------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + P R L ++G VG+P EY +S + + W + +D GA + Sbjct: 267 DAD-PRTTRLLRSLGSRPSFHMRGWRVGVPAEYDACEVSDEVRRAWSATLRACEDLGAIV 325 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG--------------LRVEGKDILE 345 +SLPHT+ AL AYY I+PAEASSNLARYDGVR+G L +G + Sbjct: 326 CAVSLPHTRAALAAYYTIAPAEASSNLARYDGVRFGFGGSRGGLSDDGGILSDDGITSAD 385 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-------- 397 + R GFG EVK R+M+GTY L + +++ RA ++R L+ DF EAF Sbjct: 386 AASDARGKGFGAEVKRRVMVGTYALGTEITSAYFERAMRVRALVADDFAEAFGTKPRRGG 445 Query: 398 ----EQGVD---VILTPTTP--TSAFPLGKE----------------------ENNSGSM 426 GVD ++L P A P + + S Sbjct: 446 GGGGGGGVDRRNLLLGAVAPGGVGAAPAPVDVILTPTTPTTAPLLRDVLATSVPRSRAST 505 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 DV TV ++AGLPAISVP L + +P+G+QLIG + L + +E Sbjct: 506 AAFAADVMTVPASLAGLPAISVPVGLGADTGLPIGMQLIGAARGDVGLLTFAAALEAR 563 >gi|296109416|ref|YP_003616365.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus infernus ME] gi|295434230|gb|ADG13401.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus infernus ME] Length = 433 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 163/453 (35%), Positives = 245/453 (54%), Gaps = 33/453 (7%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 VE + Y++ IE N +NA+IEV ++ AE +K + L G + +K Sbjct: 3 VEKAEEYLERIE-KNKDLNAFIEVQKERVLKEAERLEKDE-EAKKKPLYGKIVAVKANIN 60 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 +G S L+ + Y +TV +KL D GA+++G NMDEFA GSS ETSYYGP + Sbjct: 61 VEGYTISCASKTLENYVAPYNATVIEKLLDAGALIIGITNMDEFACGSSGETSYYGPTKN 120 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P + D+ PGGSS GS+AAV+ LC ++G+DTGGSIR P+S G G KP+YG Sbjct: 121 PV----AKDRI-PGGSSSGSAAAVSAELCDIALGSDTGGSIRNPSSHCGVSGFKPSYGVV 175 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 SR G+ A S DQ G I + D +++ I G D D T V P++++ LD + Sbjct: 176 SRHGLCDLAMSFDQIGPIAKRAEDLLLVMNIIKGKDVRDTTTVE--TPEFKK-LD--VSK 230 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 VG+ +E+ ++ I K ++GI KD G +IV ++ + ALP YY+I+ E Sbjct: 231 FKVGVVEEF-MEAADEKIRKEIEKGIEVFKDMGCEIVHLNYKYLDLALPTYYLINYVEFF 289 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 S RYDG RYG R+E G+EV RI IG+ + +Y +A Sbjct: 290 SATRRYDGRRYGYRIEEV-------------CGEEVLRRITIGSMISQKEYSGKYYKKAL 336 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAG 442 K R L++++ + + +D+I++PT P LG++ S +YN DV TV N+ G Sbjct: 337 KARNLLRKEMIKLM-KDIDIIVSPTVPKLPHKLGEK----LSPMDMYNYDVLTVLANICG 391 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +PA +VP + +P+GLQ++ +PF +E + S Sbjct: 392 VPAGTVPCSAI-NGIPIGLQIMAKPFEDEKVLS 423 >gi|3869278|gb|AAC77368.1| nicotinamidase/pyrazinamidase [Mycobacterium smegmatis] Length = 468 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 161/485 (33%), Positives = 264/485 (54%), Gaps = 39/485 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E +++R+K++S VE+ +S + +E + A++ + A A+ ++K Sbjct: 2 ELYELPLIEVAEKIRTKEVSPVEVTESSLARLEEVEPLLTAFVTTTPELALEQAKAAEKE 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G R L GIP+G+KD + T GI T + S + P +S KL+D G V++GK Sbjct: 62 IADGKYRGPLHGIPLGVKDLYDTAGIRTTSSSAQRADYVPDADSVSVAKLYDAGMVLVGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + EFA G++ T+ +PW + D+ TPGGSSGGS AAVA + ++G+DTG Sbjct: 122 THTHEFAYGATTPTTG-----NPW----APDR-TPGGSSGGSGAAVAAGVVHVALGSDTG 171 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ GTVG+KPTYGR SR+G+ S + SLD G ++R V D+A++++A++GYD Sbjct: 172 GSIRIPAALCGTVGLKPTYGRASRVGVASLSWSLDHVGPLSRNVTDAALVMQAMSGYDRR 231 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D N+ VPD +D + G +GIP Y +D ++P + + + + GA++VE Sbjct: 232 DPGTANVAVPDMVSGIDAGVAGKKIGIPVNYYIDRVAPEAAEAAKVAAATFEKLGAQLVE 291 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + +P ++ +P + I EA++ Y LR + F EV+ Sbjct: 292 VEIPMAEHIVPTEWAIMMPEATAYHMDY------LRNSPEK------------FTDEVRT 333 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF----PLG 417 + +G + D Y+ A ++RTLI+ + E F G+DV+L PT A P Sbjct: 334 LLEVGA---AEPAVD--YVNAMRLRTLIQTAWNEMF-TGIDVLLAPTVVAPATLRSDPFV 387 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + E+ + + N+ GLP++SVPAA +PLG+Q++G+PF E + + G Sbjct: 388 RWEDGTVEAATAAYVRLSAPANVTGLPSLSVPAAFTADGLPLGVQILGKPFAEPEILTFG 447 Query: 478 QIIEK 482 +E+ Sbjct: 448 YALEQ 452 >gi|256384281|gb|ACU78851.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma mycoides subsp. capri str. GM12] gi|256385114|gb|ACU79683.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma mycoides subsp. capri str. GM12] gi|296455747|gb|ADH21982.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 485 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 163/499 (32%), Positives = 248/499 (49%), Gaps = 36/499 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI--ENSNSQMNAYIEVVAQKARAAAEE 58 M + ++ E L K + ++L ++ + E ++ +N E+ A K EE Sbjct: 1 MQDYRKKSIFEIHKDLVDKKYTVLDLTKEVLKNLKYELDSNAINYLAEIHALKQAKKIEE 60 Query: 59 SDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 N D+ +L GIP KD F+TK I T A S IL+ + P+Y + + L N ++ Sbjct: 61 ------NFDSNNLLSGIPYICKDNFSTKDIPTTASSKILENYIPNYSAALVDSLEKNQSI 114 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK +DE MG + S G + +PW GGSS GS+ VA L + G Sbjct: 115 LVGKSALDELGMGGTGLLSCNGKITNPWDK-----NRIVGGSSSGSAYLVAKGLVPFATG 169 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTG SIR+PAS+ G VG KPTYG SR G++ +APSLD AG T+ V D A+L A Sbjct: 170 TDTGDSIRKPASYNGIVGFKPTYGVISRYGLLPYAPSLDTAGFFTKNVDDMAVLCDASYD 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-------IS 290 D D + D+ + +D T G Y+S I+ Q+ Sbjct: 230 DDNRDFSSTTADHVDFLKQIDDFSNIKTFG--------YISSVIESLDQEHKTHYYNLFE 281 Query: 291 WLKDAGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 LK+ G ++ + LP Y +I+ +E+ S + DG++YG RV+G D E+ Sbjct: 282 TLKNKGYQVKALDFRQDLLDAVLPVYLMIANSESVSTNSCLDGIKYGKRVDGNDYSEIMI 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N+R+ GFG+ V+ R IG+ VL + ++A+K+RTLI RDF FEQ VDV+L P Sbjct: 342 NSRTQGFGEIVRRRFAIGSLVLKGENQKKYLVQAKKVRTLINRDFNNLFEQ-VDVLLLPP 400 Query: 409 TPTSAFPLGKEENNSG--SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +P+ A PL +E NN S + + V N G P+I++P K MP+G+ + + Sbjct: 401 SPSIA-PLIEEINNPNKKSQEKDFIENILVLANFTGSPSITIP-FFKTKNMPVGINITTK 458 Query: 467 PFREETLFSVGQIIEKEAG 485 + +++E G Sbjct: 459 VKTDLLTLQAAKLLENIIG 477 >gi|308800128|ref|XP_003074845.1| glutamyl-tRNA(Gln) amidotransferase subunit A,probable (IC) [Ostreococcus tauri] gi|116061387|emb|CAL52105.1| glutamyl-tRNA(Gln) amidotransferase subunit A,probable (IC) [Ostreococcus tauri] Length = 475 Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 157/433 (36%), Positives = 231/433 (53%), Gaps = 39/433 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ IKD +G+ T A S +L Y++ V L V+LG+ NMDEF MG Sbjct: 42 LAGIPLAIKDNICRQGVSTTAGSTLLRKHLSTYDAEVVSGLKARDCVLLGQTNMDEFGMG 101 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ET P +PW + PGGSSGGS+AAVA +CA ++G+DTGGSIRQPASF Sbjct: 102 NTTETGLGPPTRNPWNA-----SHVPGGSSGGSAAAVAAQMCAGALGSDTGGSIRQPASF 156 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYG SR G++++ S D G I TV D + L +AI G +L Sbjct: 157 CGVVGLKPTYGTVSRHGLVAYCSSFDTIGPIGPTVEDVSYLFQAIKG---------DLKS 207 Query: 251 PDYERALDQS------------------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 Y+ +L +S +QG + E +S + + + + + Sbjct: 208 MKYDTSLRRSGDRKPLSFLEESQLPSRPLQGRRFAVIAEALGPGVSTEVRSAFLESVKHI 267 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 + G + ++ Q LPAYY+I+ +EASSNLAR+DG R+G + ILE Y R Sbjct: 268 EGIGGIVDLVTSRTFQRGLPAYYVIALSEASSNLARFDGTRFGSASFTQQILESYTELRQ 327 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G+EV+ RI++GTY+LSS D +Y RA+ + + + + D +LTP TP Sbjct: 328 DTLGEEVRRRILMGTYMLSSGYSDEYYTRAKCAQKQVCDELV-GYLSNYDALLTPATPDL 386 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV----PAALCEKKMPLGLQLIGQPF 468 A+ +G++ N M D+ TV +N++GLPAI V P + +++P+G+Q IG+ F Sbjct: 387 AYIVGEKTKNPLQM--YAGDLMTVNINLSGLPAIVVRSCEPESNPSQRLPIGIQFIGKHF 444 Query: 469 REETLFSVGQIIE 481 E L + E Sbjct: 445 CENELLEIAHTFE 457 >gi|261403819|ref|YP_003248043.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus vulcanius M7] gi|261370812|gb|ACX73561.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus vulcanius M7] Length = 434 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 166/461 (36%), Positives = 242/461 (52%), Gaps = 34/461 (7%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE--ESDKRIINGDARDLEGIPIGIKDC 81 VE + Y++ IE N ++NA IEV A++ A+ E D++ + L G + +K Sbjct: 3 VEKAEHYLERIEKINKKINALIEVNAERVLEEAKKLEKDEK---AKKKPLYGKVVVVKAN 59 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G S L+ + Y++TV QK+ +NG +++G NMDEFA GSS ETSYYG Sbjct: 60 INVDGYTISCASKTLENYIAPYDATVVQKIKENGGLIIGIANMDEFACGSSGETSYYGAT 119 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +P + PGGSS GS+AAV+ LC ++G+DTGGSIR PAS G VG KP+YG Sbjct: 120 KNP-----KAEDRIPGGSSSGSAAAVSADLCDLALGSDTGGSIRNPASHCGVVGFKPSYG 174 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 SR G+ A S DQ G +T+T D+ +L I G D D T V +E+ + I Sbjct: 175 VVSRYGLCDLAMSFDQIGPLTKTAEDALLLTNIIKGKDLKDTTTVE--TKPFEK---KDI 229 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 +G VG+ KE+ +D + I + I KD G +IVE++ + ALP YY+I+ E Sbjct: 230 KGFKVGVIKEF-MDVVDKKIRDKIETSIEVFKDIGCEIVELNYKYVDLALPTYYLINYVE 288 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 S+ RYDG RYG ++E D+ G+EV RIMIG+ + +Y Sbjct: 289 FFSSTRRYDGRRYGYKIE--DVC-----------GEEVLRRIMIGSMISQKEYSGKYYKN 335 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 A + R L++ + + + VD+I+ T P LG++ M DV TV N+ Sbjct: 336 ALRARNLMRNEMIKIMKD-VDIIVGATVPKLPHKLGEKLT---PMEMYSYDVLTVPANIC 391 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 GL A VP +P+GLQ+ G+PF +E + + EK Sbjct: 392 GLCAGVVPCGEIN-GIPIGLQIQGKPFDDEKVLNAMIAFEK 431 >gi|118468900|ref|YP_885485.1| amidase [Mycobacterium smegmatis str. MC2 155] gi|118170187|gb|ABK71083.1| amidase [Mycobacterium smegmatis str. MC2 155] Length = 468 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 161/485 (33%), Positives = 263/485 (54%), Gaps = 39/485 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + E +++R+K++S VE+ +S + +E + A++ + A A+ ++K Sbjct: 2 ELYELPLIEVAEKIRTKEVSPVEVAESSLARLEEVEPLLTAFVTTTPELALEQAKAAEKE 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I +G R L GIP+G+KD + T GI T + S + P +S KL+D G V++GK Sbjct: 62 IADGKYRGPLHGIPLGVKDLYDTAGIRTTSSSAQRADYVPDADSVSVAKLYDAGMVLVGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + EFA G++ T+ +PW + D+ TPGGSSGGS AAVA + ++G+DTG Sbjct: 122 THTHEFAYGATTPTTG-----NPW----APDR-TPGGSSGGSGAAVAAGVVHVALGSDTG 171 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ GTVG+KPTYGR SR+G+ S + SLD G ++R V D+A++++A++GYD Sbjct: 172 GSIRIPAALCGTVGLKPTYGRASRVGVASLSWSLDHVGPLSRNVTDAALVMQAMSGYDRR 231 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D N+ VPD +D + G +GIP Y D ++P + + + + GA++VE Sbjct: 232 DPGTANVAVPDMVSGIDAGVAGKKIGIPVNYYTDRVAPEAAEAAKVAAATFEKLGAQLVE 291 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + +P ++ +P + I EA++ Y LR + F EV+ Sbjct: 292 VEIPMAEHIVPTEWAIMMPEATAYHMDY------LRNSPEK------------FTDEVRT 333 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF----PLG 417 + +G + D Y+ A ++RTLI+ + E F G+DV+L PT A P Sbjct: 334 LLEVGA---AEPAVD--YVNAMRLRTLIQAAWNEMF-TGIDVLLAPTVVAPATLRSDPFV 387 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + E+ + + N+ GLP++SVPAA +PLG+Q++G+PF E + + G Sbjct: 388 RWEDGTVEAATAAYVRLSAPANVTGLPSLSVPAAFTADGLPLGVQILGKPFAEPEILTFG 447 Query: 478 QIIEK 482 +E+ Sbjct: 448 YALEQ 452 >gi|331699686|ref|YP_004335925.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326954375|gb|AEA28072.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 474 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 163/485 (33%), Positives = 255/485 (52%), Gaps = 35/485 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +++E+ + + +S VELV++ ++ IE S Q NAYI V A A A A S+ Sbjct: 5 ELLDRSLTETAALVADRRVSPVELVEAALRRIE-SIEQTNAYISVFADDALAVARASETM 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+PI +KD + +G T A S +L P ++TVT++L GA+++GK Sbjct: 64 IAAGHRLGPLHGVPIALKDNISVRGRRTTAGSKVLADHHPEADATVTERLRSAGAIIIGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA G ++ +YG V +PW + PGGSSGGS AVA C ++GTDTG Sbjct: 124 TNLHEFAWGGTSANPHYGFVTNPWDT-----SRMPGGSSGGSGVAVATRSCFGALGTDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++ G G++PT GR S G++ A S+D G + RT D A++ +AG+D Sbjct: 179 GSIRLPSALNGVTGLRPTIGRVSNAGVVPLAWSMDTVGPMARTAADCAVMFGVLAGHDPA 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DA + DY R LD + G+ +G+ + Y L ++ ++K + +S L DAGA++V+ Sbjct: 239 DAGSADRSGEDYTRDLDLGVDGLRIGLIEGYSLHHVQAPVEKAVRGALSRLDDAGARVVD 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + + + + A + AE S+ R+ LR D +G +V+ Sbjct: 299 VVVDDIEGNISAQLTVEAAEPSTYHQRW------LRERPDD------------YGDDVRL 340 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + YL+A++ R L++R A + DV+ PT P +A LG+ E Sbjct: 341 -----LLEAGELLLATQYLQAQRYRALLRRQTLAALARA-DVLACPTLPFTATALGEVEV 394 Query: 422 --NSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + G + + + FT ++ GLPAISVP + +P+G+QLIG+PF E TL V Sbjct: 395 EIDEGVREDMLSAIMQFTGLPSLTGLPAISVPCGFDDAGLPIGVQLIGKPFAEATLLRVA 454 Query: 478 QIIEK 482 ++ Sbjct: 455 AAFQR 459 >gi|47459212|ref|YP_016074.1| amidase [Mycoplasma mobile 163K] gi|47458541|gb|AAT27863.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma mobile 163K] Length = 446 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 153/428 (35%), Positives = 234/428 (54%), Gaps = 30/428 (7%) Query: 67 DARDLEGI----PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 DA++ EG+ +KD FA ++ S L GF+P Y ST+ KL GA ++GK Sbjct: 29 DAKNSEGLLSKTTYVLKDVFAHSNSTSEGSSDFLKGFKPFYNSTIITKLQKEGAALVGKT 88 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+DEF +G++ S G +++P +DST GGSS GS AA+ + +IGTDTG Sbjct: 89 NLDEFGLGATGTFSSKGVILNP---LDSTR--IVGGSSSGS-AAIFNEKLSFAIGTDTGD 142 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PASF G VG KP+YG SR G+ FA SLD G T V+DS IL K + G DE D Sbjct: 143 SVRLPASFVGKVGFKPSYGSVSRYGLFPFASSLDTVGWFTHNVQDSNILAKVLYGKDEKD 202 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T + D + + ++ + T+GI Y+ +L K + I+ L++ G KI + Sbjct: 203 FTSL-----DVKMNIVKAEKPKTIGIFNCYK--FLGEETSKKFNDLINILENEGIKINVL 255 Query: 303 SLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +P L Y IIS +EAS+NLA +G+ +G + G + E+ NTRS FG V+ Sbjct: 256 EIPEEYLLLIQVVYRIISYSEASTNLANLNGMAFGNKKHGNNWEEIMINTRSENFGYMVQ 315 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPL--- 416 R+ +G Y L + +LRA+K+R ++K F + +D+IL P++P A + Sbjct: 316 KRLTLGAYFLDVENQEDLFLRAQKVRRILKDSILSFFNKLKIDMILMPSSPEVAPKIDSI 375 Query: 417 -GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLF 474 E+NN G M +I T++ N+ G P+IS+P + +K+P+ + + + +E LF Sbjct: 376 SSNEKNNYGYMPYI----LTLS-NLVGNPSISIPWITSQNEKLPINITIETNIYDDEKLF 430 Query: 475 SVGQIIEK 482 S +E+ Sbjct: 431 SYSLFLEE 438 >gi|156937707|ref|YP_001435503.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ignicoccus hospitalis KIN4/I] gi|156566691|gb|ABU82096.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ignicoccus hospitalis KIN4/I] Length = 445 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 164/470 (34%), Positives = 242/470 (51%), Gaps = 41/470 (8%) Query: 24 VELVDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 +E ++ A+E ++NA+I E V ++AR+ E R L P+ I Sbjct: 1 MESLERLYDALERD--ELNAFITLRPREEVLREARSLLE-----------RGLRPKPVTI 47 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD +TKGI T A S +L + P +++TV ++L + G V++GK NMDEF MGS+ E S + Sbjct: 48 KDNISTKGIRTTAGSLMLKDYVPPFDATVIKRLKERGYVIVGKTNMDEFGMGSTGENSAF 107 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +P + G + ++ G +G+DTGGS+R PA++ G+KP Sbjct: 108 GPTKNPLDPAKVPGGSSSGAGAAARRYSLPG------LGSDTGGSVRAPAAWCSAFGLKP 161 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYG SR G+I +A SL+Q I TV+ LL IAGYDE D T V + + + Sbjct: 162 TYGAVSRYGLIPYADSLEQISPIGPTVKSVEELLDVIAGYDEMDGTTVKREL-RVKGCSE 220 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + ++G+ + +P L+Y+ + + + L GA++ E LP + ALPAYY I+ Sbjct: 221 KGVEGLKLFVPSNA-LEYVDNDVKAEFNAALRKLSSEGAEVEEGQLPELEAALPAYYTIA 279 Query: 319 PAEASSNLARYDGVRYGLRVEG-----KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 AEASSNL+RYDG+RYGLR E ++ E R FG EVK RI+ G VLS+ Sbjct: 280 MAEASSNLSRYDGIRYGLRDEDLPPITENFYEYVSEVRGKYFGWEVKRRIVAGATVLSAG 339 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 + YL+A K R I E E+ +I+TPT P L + DV Sbjct: 340 YSEELYLKALKARRKISERIYEITEE--RLIVTPTMPVKPPSLASARSPKELFAM---DV 394 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 TV N+AG+PA S P +GLQ++G + E + V E++ Sbjct: 395 LTVFANLAGVPAGSAPVGEG-----VGLQVVGPRWGECEVLRVMGTFERK 439 >gi|254581540|ref|XP_002496755.1| ZYRO0D07392p [Zygosaccharomyces rouxii] gi|238939647|emb|CAR27822.1| ZYRO0D07392p [Zygosaccharomyces rouxii] Length = 469 Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 151/408 (37%), Positives = 230/408 (56%), Gaps = 27/408 (6%) Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 GIKD TK + T S IL + +++T + L D GA+++GK N+DEF MGS+ S Sbjct: 52 GIKDNIVTKDMPTTCGSKILLDYMSPFDATCVKLLRDAGALLVGKTNLDEFGMGSTGIHS 111 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 Y+GPV +P + + GGSS GS+AAVA ++GTDTGGS+R PA++T T+G Sbjct: 112 YFGPVRNP---LFPNENAVAGGSSSGSAAAVAAGATDFALGTDTGGSVRLPAAYTSTLGF 168 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD--YE 254 KP+YGR SR G+I++A SLD GI+ + + + + YDE D T ++ + D + Sbjct: 169 KPSYGRISRFGVIAYAQSLDTVGILAKDLSVLRKVFGVLDKYDERDPTSLSNKLRDAISD 228 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R + +S +GIPKE+ ++ + + + L G ++ +S+P ++ALP Y Sbjct: 229 RRVKRST--YRIGIPKEFVQGSMAKELMEPLSNFLEKLMKQGHELYPVSMPSMKFALPVY 286 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRIMIGTYVLSS 372 + ISPAEA+SNLAR+DG+RYG R E D+ + ++ TR FGQ VK R+++G Y L S Sbjct: 287 FTISPAEAASNLARFDGIRYGTRSEKGDLEDGTLFSPTRD-AFGQVVKDRMVLGNYNLCS 345 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAF------------EQGVDVILTPTT--PTSAFPLGK 418 + Y+RA+++R +F F + G+D+IL T P + Sbjct: 346 EAFKDSYIRAQRLRVKTIDEFDSIFRFPNLLTGSKGNDAGLDLILGLTNDGPPQSIDHYH 405 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 EE S + ND+F +++AGLP IS P ++ PLG+Q GQ Sbjct: 406 EEKVSSPINEYKNDIFVTPMSLAGLPVISFP---LKRDAPLGVQFAGQ 450 >gi|50364977|ref|YP_053402.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mesoplasma florum L1] gi|50363533|gb|AAT75518.1| Glu-tRNA amidotransferase subunit A [Mesoplasma florum L1] Length = 482 Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 154/477 (32%), Positives = 253/477 (53%), Gaps = 14/477 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E +++ +K+I+ +EL ++ I N NA ++ + A A ++E +K ++N Sbjct: 6 LSILELHNKIINKEITILELTNAVISE-ANKVKSSNAINKMNEENAIAFSKEMEK-VLNT 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 ++ L GIP KD FATKG+ T + S+IL G+ P + +T KL D GAV++GK +DE Sbjct: 64 NSL-LYGIPYFAKDNFATKGLETTSSSNILKGYIPPFNATSISKLEDKGAVLIGKAALDE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 MG S G + +P S GGSS GS+ VA + + G+DTG SIR+ Sbjct: 123 LGMGGVGLYSCNGIITNPADS-----NRIVGGSSSGSAYLVAKGIVPFATGSDTGDSIRK 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF VG KP+YG SR G++ ++PSLD G TR V D AI+ A GYD DAT Sbjct: 178 PASFNNIVGFKPSYGAISRYGLLPYSPSLDTVGFFTRNVEDMAIVCDATFGYDVKDATSH 237 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 D + + + G K+ +D L+ + ++ Q LK G ++VE+ Sbjct: 238 ENKSIDMLNNISNINKSVKFGYIKKV-IDDLNEKVKNSYYQLFETLKSKGYEVVEVQFNQ 296 Query: 307 TQY-ALPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 +L A Y +IS +E+ S A DG+++G R G D +E+ N+R+ GFG EVK R + Sbjct: 297 ELLDSLSAIYKMISFSESVSTNANLDGIKFGQRAAGSDYVEIITNSRTEGFGNEVKQRFL 356 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G L+ + +A+++R LI + F + D+++ P T A + + + N Sbjct: 357 VGALNLNKENQTIYLNKAKQVRRLIVEELNRVFSK-TDILIIPPTDNVAPLIEERKINVS 415 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +D+ T+A N G P+I++P + E K+ +G+ + +P + +++E Sbjct: 416 PEKEYLSDILTLA-NFNGSPSITIP-FVKEGKLGIGININAKPKEDLLCLQAAKLLE 470 >gi|42561287|ref|NP_975738.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492785|emb|CAE77380.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320639|gb|ADK69282.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 485 Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 163/499 (32%), Positives = 248/499 (49%), Gaps = 36/499 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI--ENSNSQMNAYIEVVAQKARAAAEE 58 M + ++ E L K + ++L ++ + E ++ +N E+ A K EE Sbjct: 1 MQDYRKKSIFEIHKDLVDKKYTVLDLTKEVLKNLKYELDSNAINYLAEIHALKQAKKIEE 60 Query: 59 SDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 N D+ +L GIP KD F+TK I T A S IL+ + P+Y + + L N ++ Sbjct: 61 ------NFDSNNLLSGIPYICKDNFSTKDIPTTASSKILENYIPNYSAALVDSLDKNQSI 114 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK +DE MG + S G + +PW GGSS GS+ VA L + G Sbjct: 115 LVGKSALDELGMGGTGLLSCNGKIANPWDK-----NRIVGGSSSGSAYLVAKGLVPFATG 169 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTG SIR+PAS+ G VG KPTYG SR G++ +APSLD AG T+ V D A+L A Sbjct: 170 TDTGDSIRKPASYNGIVGFKPTYGVISRYGLLPYAPSLDTAGFFTKNVDDMAVLCDASYD 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-------IS 290 D D + D+ + ++ T G Y+S I+ Q+ Sbjct: 230 NDTRDFSSTTADHVDFLKQINDFSNIKTFG--------YISSVIESLDQEHKTHYYNLFE 281 Query: 291 WLKDAGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 LK+ G +I + ALP Y +I+ +E+ S + DG++YG RV+G D E+ Sbjct: 282 TLKNKGYQIKALDFRQDLLDAALPVYLMIANSESVSTNSCLDGIKYGKRVDGNDYSEIMI 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N+R+ GFG+ V+ R IG+ VL + ++A+K+RTLI RDF FEQ VDV+L P Sbjct: 342 NSRTQGFGEIVRRRFAIGSLVLKGENQKKYLVQAKKVRTLINRDFNNLFEQ-VDVLLLPA 400 Query: 409 TPTSAFPLGKE--ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +P+ A PL +E N S + + V N G P+I++P K MP+G+ + + Sbjct: 401 SPSIA-PLIEEITNPNKKSQEKDFIENILVLANFTGSPSITIP-FFKTKNMPVGINITTK 458 Query: 467 PFREETLFSVGQIIEKEAG 485 + +++E G Sbjct: 459 VKTDLLTLQAAKLLENIIG 477 >gi|159905545|ref|YP_001549207.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcus maripaludis C6] gi|229485877|sp|A9A9F2|GATA_METM6 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|159887038|gb|ABX01975.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanococcus maripaludis C6] Length = 431 Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 171/460 (37%), Positives = 245/460 (53%), Gaps = 34/460 (7%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG 86 V Y++ IE S+ +NA+I+V ++K AEE +K + + L G + +K KG Sbjct: 6 VSDYLEKIEKSD--VNAFIDVNSEKVLKEAEELEKNDYLKN-KPLYGKIVAVKSNINVKG 62 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 S L+ + Y++TV +KL GA+++G NMDEFA GSS ETSY+GP +P Sbjct: 63 YKISCASKTLEKYTGTYDATVVKKLRLQGALIVGMTNMDEFASGSSGETSYFGPTKNPA- 121 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 +MD PGGSS GS+AAVA LC +IG+DTGGSIR PAS G VG KP+YG SR Sbjct: 122 AMDRI----PGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQ 177 Query: 207 GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTV 266 G+ A S DQ G +T+ D+ +L AI G D D+T +L P +E+ + I V Sbjct: 178 GLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDST--SLETPKFEK---KDISNYKV 232 Query: 267 GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 G+ KE+ +D I ++GI KD G KIV++S + ALP YY+I+ E S Sbjct: 233 GVVKEF-MDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFSAT 291 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 +YDG RYG +E G+EV RI+IG ++ +Y +A + R Sbjct: 292 RKYDGRRYGEFIEE-------------ACGEEVLRRILIGKHISEQEFSGKYYKKALQAR 338 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 +K++ F D+I+ PT P LG E+ S + Y DV TV N+ G+ + Sbjct: 339 KAMKKEMLGLF-NSADLIVGPTVPKLPHKLG--EDLSPMEMYAY-DVLTVPTNICGICSG 394 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 V + +P+GLQ+ G P +E + S +IE E Y Sbjct: 395 VVRCGNIQ-GVPVGLQIQGAPLEDEKVLSA--MIEFEKNY 431 >gi|227499504|ref|ZP_03929611.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Anaerococcus tetradius ATCC 35098] gi|227218383|gb|EEI83634.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Anaerococcus tetradius ATCC 35098] Length = 470 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 154/473 (32%), Positives = 245/473 (51%), Gaps = 41/473 (8%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE-GIPIGIK 79 IS E + ++ IE+ ++NAYI + + + A+E DK++ +G G+PI +K Sbjct: 15 ISVEEHIGKTLEKIEDD--KLNAYISIDHEGSIERAKELDKKLKSGKKLGKLFGLPIAVK 72 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D + K + S +L FRP Y ++V + L A+++ K NMDEFAMG +TSY+G Sbjct: 73 DNISYKNMKMTCASKMLKDFRPLYNASVIENLLAEDAIIVAKTNMDEFAMGGRGKTSYFG 132 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 P +P + PGGSS GS+ AVA ++GTDTGGS+R PAS+ +G KP+ Sbjct: 133 PTKNPLDH-----QRVPGGSSSGSAVAVAQGDVLVALGTDTGGSVRCPASYCNIIGYKPS 187 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC----VNLPVPDYER 255 Y SR G++S A +LDQ + + + D L A D D T N DY+ Sbjct: 188 YSIMSRYGVVSMANTLDQVSLFAKNIEDLRRLADISASADPKDMTSNLEKYNYTFEDYDF 247 Query: 256 A--------LDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + D S+ +G+ + ++Y++ + L+ GA + I L + Sbjct: 248 SNKKIAYIKTDSSLYEGIEDAVKEDYKI-------------ALEALEKLGADLQPIDLNY 294 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 +YA P Y ++ +E SSN++RYD VRYG + + +++ +++ +RS G G+EV+ RI + Sbjct: 295 AKYANPVYNVVMSSEVSSNMSRYDSVRYGYQADSYENVEDLFVKSRSEGLGEEVQRRIAL 354 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 GT LS+ Y + KIRTLIK + + FE D+I+TPT T+ P +E+ Sbjct: 355 GTMYLSANDDQKIYKKGLKIRTLIKEELEKIFED-YDLIITPT--TTNLPPKMDEDIDDP 411 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + D F V VN++G+ ISVP + +Q I F + L + + Sbjct: 412 LSDFKADGFNVIVNLSGMCGISVP---VRSGISGSVQFIANRFEDNKLLNASE 461 >gi|283826938|ref|YP_003377700.1| putative amidotransferase [Corynebacterium glutamicum] gi|283362278|dbj|BAI66035.1| putative amidotransferase [Corynebacterium glutamicum] Length = 479 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 173/483 (35%), Positives = 259/483 (53%), Gaps = 34/483 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + +E ++SK++S VEL S + N +NAYI ++A A A+ +++ Sbjct: 8 ELLHKSATEVAALIQSKEVSPVELTQSLLDHAHELNDTVNAYISFRDEEALAEAKVAEEE 67 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I NG+ R L GIP+ IKD G T S I F +S+V +KL + G V+ GK Sbjct: 68 IANGNYRGPLHGIPMAIKDNIYVGGEVTTMASKIHGDFVSKDDSSVVKKLREAGVVLTGK 127 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNM E+A G N ++G V +PW + DK PGGSSGGS AAVA + ++GTDT Sbjct: 128 LNMHEYAWGIDNNNPHFGAVHNPW----NLDK-VPGGSSGGSGAAVAADMTFTTLGTDTA 182 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++ G VG+KPT+GR ++ G A SLD G +++TV D+A L+AIAGYD Sbjct: 183 GSIRIPSAACGLVGLKPTHGRVAKYGCFPLAWSLDHIGPMSKTVADAAATLQAIAGYDHR 242 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V++PV DY AL + + +GI + Y + I++ ++ I L GA + Sbjct: 243 DPTSVDVPVGDYSAALGGDPKDLVIGIEENYFFKNVDSPIEQLVRKQIDDLVSRGAILKT 302 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +S+P Y+ A S +EAS+ + D+ R G +++ Sbjct: 303 VSIPSLAYSEWAELATSLSEASA-------------IHHHDL-----QNRPEDLGADIRF 344 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 +G S +L+A+++R IK++F A Q VDVI+ PT P A +G Sbjct: 345 LFELGELFSSVD-----FLQAQQVRRQIKQEFVAAL-QDVDVIIAPTLPVMAPDIGSPVA 398 Query: 422 N-SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N +G+ + ++ FT N+ GLPA++VP L + +P+GLQ+IG+ F E T+ VG Sbjct: 399 NLNGTEVDLIDNFIRFTGPSNLTGLPALTVPVGLSD-DLPVGLQIIGRAFDESTVLKVGS 457 Query: 479 IIE 481 IE Sbjct: 458 QIE 460 >gi|302306716|ref|NP_983087.2| ABR140Cp [Ashbya gossypii ATCC 10895] gi|299788651|gb|AAS50911.2| ABR140Cp [Ashbya gossypii ATCC 10895] Length = 463 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 155/416 (37%), Positives = 235/416 (56%), Gaps = 27/416 (6%) Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L + +GIKD TK + T S +L G+ Y++TV + L + GAV GK NMDEF Sbjct: 37 KPLGNLVVGIKDNIVTKKLPTTCSSGVLAGYMSPYDATVVELLDEAGAVTAGKTNMDEFG 96 Query: 129 MGSSNETSYYGPVISP-WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 MGS S++GP ++P + + + GS+ +A V F ++GTDTGGS+R P Sbjct: 97 MGSGGIHSFFGPTLNPAFPERPTVAGGSSSGSAAAVAAGVVDF----ALGTDTGGSVRMP 152 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++T TVG KP+YGR SR G+I++A SLD GI R V + + + +D D T + Sbjct: 153 AAYTSTVGFKPSYGRVSRHGVIAYAQSLDTVGIGARDVGLVRRVFEVLDRHDPKDPTSLP 212 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + AL + + + +GIP E ++ I + + L+ G ++ +S+P Sbjct: 213 DELRQQAAALRREKKHLKIGIPAELLHGSVAAEIRERLLVVLDKLQAQGHELYPVSVPAV 272 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQEVKHRIMI 365 + +L YY+++PAEA+SNLARYDG+RYG R E D+ + ++ TR FG+EVK+RI++ Sbjct: 273 KNSLLVYYMLAPAEAASNLARYDGIRYGCRDEDLDMSDEVLFAPTRG-KFGKEVKNRIVL 331 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTE--AFEQ----------GVDVILTPTT---P 410 G Y L S + ++Y++A+K+R + F AFE GVDV+L+ T P Sbjct: 332 GNYNLCSGAFKNNYMKAQKLRVELINQFDSIFAFENICTGNKPNPAGVDVLLSLTCMAPP 391 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 S +EN S +I NDVFTV +++AGLP ISVP A + +G+QL Q Sbjct: 392 PSLEAFTSKENKSPVNSYI-NDVFTVPMSLAGLPCISVPLAGMKG---VGIQLTAQ 443 >gi|331703731|ref|YP_004400418.1| glutamyl tRNA(Gln) amidotransferase subunit A [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802286|emb|CBW54440.1| Glutamyl tRNA(Gln) amidotransferase subunit A [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 485 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 162/499 (32%), Positives = 247/499 (49%), Gaps = 36/499 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI--ENSNSQMNAYIEVVAQKARAAAEE 58 M + ++ E L K + ++L ++ + E ++ +N E+ A K EE Sbjct: 1 MQDYRKKSIFEIHKDLVDKKYTVLDLTKEVLKNLKYELDSNAINYLAEIHALKQAKKIEE 60 Query: 59 SDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 N D+ +L GIP KD F+TK I T A S IL+ + P+Y + + L N ++ Sbjct: 61 ------NFDSNNLLSGIPYICKDNFSTKDIPTTASSKILENYIPNYSAALVDSLEKNQSI 114 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK +DE MG + S G + +PW GGSS GS+ VA L + G Sbjct: 115 LVGKSALDELGMGGTGLLSCNGKIANPWDK-----NRIVGGSSSGSAYLVAKGLVPFATG 169 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTG SIR+PAS+ G VG KPTYG SR G++ +APSLD AG T+ V D A+L A Sbjct: 170 TDTGDSIRKPASYNGIVGFKPTYGVISRYGLLPYAPSLDTAGFFTKNVDDMAVLCDASYD 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-------IS 290 D D + D+ + +D T G Y+S I+ Q+ Sbjct: 230 NDTRDFSSTTADHVDFLKQIDDFSNIKTFG--------YISSVIESLDQEHKTHYYNLFE 281 Query: 291 WLKDAGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 LK+ G +I + LP Y +I+ +E+ S + DG++YG RV+G D E+ Sbjct: 282 TLKNKGYQIKALDFRQDLLDAVLPVYLMIANSESVSTNSCLDGIKYGKRVDGNDYSEIMI 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N+R+ GFG+ V+ R IG+ VL + ++A+K+RTLI RDF F+Q VDV+L P Sbjct: 342 NSRTQGFGEIVRRRFAIGSLVLKGENQKKYLVQAKKVRTLINRDFNNLFDQ-VDVLLLPP 400 Query: 409 TPTSAFPLGKE--ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +P+ A PL +E N S + + V N G P+I++P K MP+G+ + + Sbjct: 401 SPSIA-PLIEEITNPNKKSQEKDFIENILVLANFTGSPSITIP-FFKTKNMPVGINITTK 458 Query: 467 PFREETLFSVGQIIEKEAG 485 + +++E G Sbjct: 459 VKTDLLTLQAAKLLENIIG 477 >gi|88803544|ref|ZP_01119069.1| glutamyl-tRNA amidotransferase subunit A [Polaribacter irgensii 23-P] gi|88780556|gb|EAR11736.1| glutamyl-tRNA amidotransferase subunit A [Polaribacter irgensii 23-P] Length = 467 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 163/453 (35%), Positives = 244/453 (53%), Gaps = 21/453 (4%) Query: 15 RLRSKDISAVELVDSYIQAI-ENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLE 72 +L SK+ + V LV + + EN+++ +N+ ++ + A A + D +I NG D LE Sbjct: 11 QLLSKEFTCVSLVQGKLDLLQENTHNTVNS---LLIETALGLAAKVDIKIENGEDIGLLE 67 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP GIKD F +G A S +L ++ Y +T QKL D GA+ L K N D F GSS Sbjct: 68 GIPFGIKDVFMLQGTLATASSDLLKSYKSSYTATAIQKLLDAGAIPLVKENCDSFGHGSS 127 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +E + +G V + + + GGSSGGS+ VA SIG DTGGSIRQPA F Sbjct: 128 SENTIFGAVKNAINT-----ELVSGGSSGGSAVNVAKEFTIFSIGGDTGGSIRQPAGFNE 182 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KPTYG+ SR G++++A S D G I ++ D I+L ++G D D T Sbjct: 183 VFGFKPTYGKISRYGLMAYASSTDCVGPIANSIEDLRIVLNIMSGKDVRDQTTYG-SEEI 241 Query: 253 YERALDQSIQGM-TVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 E A+D + TVG K + D ++ I + + + +K +G I + Sbjct: 242 SEEAIDYKTSSVKTVGYFKNFIEADAITDEIKEAFLATLEKIKASGIAIKALDFFDADIL 301 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + YY ++ AE +SNL+R DG YG R+EG+++ + Y TRS F +E K RI+ G VL Sbjct: 302 VSTYYTLAMAETASNLSRLDGTNYGARIEGENLKDTYSITRSEKFSEETKRRIVGGNQVL 361 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S D+ YL+A+ IR I F++ F + VD+IL+P TP + +G+ N +M Sbjct: 362 SQGFSDAIYLKAQHIRGQISAQFSKDFTE-VDLILSPVTPGAPPKIGESLKNPLAM--YL 418 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +D +TV ++ GLP +++P K GLQ+ Sbjct: 419 SDAYTVGFSLGGLPTLTIP-----KGTATGLQI 446 >gi|313665595|ref|YP_004047466.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma leachii PG50] gi|312949804|gb|ADR24400.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma leachii PG50] Length = 485 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 161/499 (32%), Positives = 248/499 (49%), Gaps = 36/499 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI--ENSNSQMNAYIEVVAQKARAAAEE 58 M + ++ E L K + ++L ++ + E ++ +N E+ A K EE Sbjct: 1 MQDYRKKSIFEIHKDLVDKKYTVLDLTKEVLKNLKYELDSNAINYLAEIHALKQAKKVEE 60 Query: 59 SDKRIINGDARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 N D+ +L GIP KD F+TK I T A S IL+ + P+Y + + L N ++ Sbjct: 61 ------NFDSNNLLCGIPYICKDNFSTKDIPTTASSKILENYIPNYSAALVDSLDKNQSI 114 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK +DE MG + S G + +PW GGSS GS+ VA L + G Sbjct: 115 LVGKSALDELGMGGTGLLSCNGKITNPWDK-----NRIVGGSSSGSAYLVAKGLVPFATG 169 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTG SIR+PAS+ G VG KPTYG SR G++ +APSLD AG T+ V D A+L A Sbjct: 170 TDTGDSIRKPASYNGIVGFKPTYGVISRYGLLPYAPSLDTAGFFTKNVDDMAVLCDASYD 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-------IS 290 D D + D+ + ++ T G Y+S I+ Q+ Sbjct: 230 NDTRDFSSTTADHVDFLKQINDFSNIKTFG--------YISSVIESLDQEHKTHYYNLFE 281 Query: 291 WLKDAGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 LK+ G +I + LP Y +I+ +E+ S + DG++YG RV+G D E+ Sbjct: 282 TLKNKGYQIKALDFRQDLLDAVLPVYLMIANSESVSTNSCLDGIKYGKRVDGNDYSEIMI 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N+R+ GFG+ V+ R IG+ VL + ++A+K+RTLI RDF FEQ +DV+L P Sbjct: 342 NSRTQGFGEIVRRRFAIGSLVLKGENQKKYLVQAKKVRTLINRDFNNLFEQ-IDVLLLPA 400 Query: 409 TPTSAFPLGKE--ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +P+ A PL +E N S + + V N G P+I++P K MP+G+ + + Sbjct: 401 SPSIA-PLIEEITNPNKKSQERDFIENILVLANFTGSPSITIP-FFKTKNMPVGINITTK 458 Query: 467 PFREETLFSVGQIIEKEAG 485 + + +++E G Sbjct: 459 VKTDLSTLQAAKLLENIIG 477 >gi|134045111|ref|YP_001096597.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcus maripaludis C5] gi|166217681|sp|A4FW11|GATA_METM5 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|132662736|gb|ABO34382.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Methanococcus maripaludis C5] Length = 431 Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 172/462 (37%), Positives = 245/462 (53%), Gaps = 38/462 (8%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEGIPIGIKDCFAT 84 V Y++ IE S+ +NA+I+V ++K AEE +K N D ++ L G + +K Sbjct: 6 VSDYLEKIEKSD--VNAFIDVNSEKVLKEAEELEK---NDDLKNKPLYGKIVAVKSNINV 60 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 KG S L+ + Y++TV +KL GA+++G NMDEFA GSS ETS YGP +P Sbjct: 61 KGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNP 120 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + D+ PGGSS GS+AAVA LC +IG+DTGGSIR PAS G VG KP+YG S Sbjct: 121 A----ALDRI-PGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVS 175 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 R G+ A S DQ G +T+ D+ +L AI G D D+T +L P +E+ + I Sbjct: 176 RQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDST--SLETPKFEK---KDISNY 230 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 VG+ KE+ +D I ++GI KD G KIV++S + ALP YY+I+ E S Sbjct: 231 KVGVVKEF-MDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFS 289 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 +YDG RYG +E G+EV RI+IG ++ +Y +A + Sbjct: 290 ATRKYDGRRYGEFIEE-------------ACGEEVLRRILIGKHISEQEFSGKYYKKALQ 336 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 R +K++ F D+I+ PT P LG E+ S + Y DV TV N+ G+ Sbjct: 337 ARKSMKKEMLGLF-NSADLIVGPTVPKLPHKLG--EDLSPMEMYAY-DVLTVPTNICGIC 392 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + V +P+GLQ+ G P +E + S +IE E Y Sbjct: 393 SGVVRCGNIS-GVPVGLQIQGAPLEDEKVLSA--MIEFEKNY 431 >gi|296117630|ref|ZP_06836214.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium ammoniagenes DSM 20306] gi|295969361|gb|EFG82602.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium ammoniagenes DSM 20306] Length = 471 Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 165/465 (35%), Positives = 260/465 (55%), Gaps = 34/465 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 +++VEL + ++ + N Q+NAYI ++A A A+++D+ I G R L G+P+ IK Sbjct: 23 VTSVELTQALLKHARSLNEQVNAYISFREEQALADAKKADEEIAAGKIRGPLHGVPMAIK 82 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D G + S I F +++V ++ + G V+ GKLNM E+A G N + ++G Sbjct: 83 DNIYIGGEVSTMASKIHQDFVSDDDASVVARMKEAGIVLTGKLNMHEYAWGIDNNSPHFG 142 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 PV +PW DK PGGSSGGS AAVA + +++GTDT GSIR P++ G VG+KPT Sbjct: 143 PVHNPW----DLDK-VPGGSSGGSGAAVASDMSFSTLGTDTAGSIRIPSAACGLVGLKPT 197 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 +G ++ G A +LD G ++++V D+A LL+ IAG+DE D T V + V +Y+ AL Sbjct: 198 HGLVAKYGCFPLAWTLDHIGPMSKSVDDAAALLQVIAGFDERDPTSVKVEVGNYQDALRG 257 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 + +G+ ++Y + I+K + I L D GA + +S+P Y+ A S Sbjct: 258 DPSKLVIGVEEDYFFKDVDSDIEKRVRDQIQALADQGATVKTVSIPSLAYSEWAELATSL 317 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 +EAS+ + D++ R+ FG +++ +G V SS Y Sbjct: 318 SEASA-------------IHHNDLI-----NRADDFGDDIRFLFELGE-VFSS----VDY 354 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--EENNSGSMGHIYNDV-FTV 436 L+A+++R IK+DF +A E+ VDVI+ PT P +G + N + I + + FT Sbjct: 355 LQAQQVRRQIKQDFAKALEE-VDVIIAPTLPVMPPTIGSPVADLNGTDVDLIDHFIRFTG 413 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+ GLPA+S+P L + +P+GLQ+IG+ F EET+ +VG IIE Sbjct: 414 PSNLTGLPALSMPVGL-KDGLPIGLQIIGRAFDEETVLNVGSIIE 457 >gi|254495275|ref|ZP_05108199.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Polaribacter sp. MED152] gi|213690658|gb|EAQ40786.2| glutamyl-tRNA(Gln) amidotransferase, A subunit [Polaribacter sp. MED152] Length = 469 Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 160/470 (34%), Positives = 245/470 (52%), Gaps = 22/470 (4%) Query: 15 RLRSKDISAVELVDSYIQAIE-NSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-E 72 +L +K+I+ +LV + ++ N+ + +N+ +E +KA A + D +I G+ L E Sbjct: 11 QLMNKEITCTKLVKDRLDLLKANTYNTVNSLLE---EKALELANKVDAKIAKGETLGLLE 67 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP GIKD + +G +T A S +L ++ Y +T QKL D GA+ L K N D F GSS Sbjct: 68 GIPFGIKDVYMVQGTYTTASSDLLKNYKSAYTATAIQKLLDAGAIPLVKENCDSFGHGSS 127 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +E + +G V + GGSSGGS+ VA SIG DTGGSIRQPA + Sbjct: 128 SENTIFGAVKNALNP-----DLVGGGSSGGSAVNVAKEYTVFSIGGDTGGSIRQPAGYNN 182 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KPTYGR SR G++++A S D G I ++ D I+L ++G D D T + Sbjct: 183 VFGFKPTYGRISRFGLMAYASSTDCVGPIAKSTEDIRIVLNVMSGKDVKDQTTFHSESIS 242 Query: 253 YERALDQSIQGM-TVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 E L G+ TVG K + D + + + I +K G K+ E+ + Sbjct: 243 KESTL--KTDGIKTVGYFKNFIESDAIDAQVKGDFLASIEKIKSKGIKVKELDFFESDTL 300 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + YY ++ AE +SNL+R DG YG R+EGK++ + Y TRS F +E K RI+ G VL Sbjct: 301 VSTYYTLAMAETASNLSRLDGTNYGDRIEGKNLKDTYAITRSENFSEESKRRIVGGNQVL 360 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S D YL+ +R I +F + F++ VD+IL+P TP++ +G + +M Sbjct: 361 SQGFSDEIYLKGLNLRDQIADNFEKDFKE-VDIILSPVTPSTPPKIGDSLKDPLAM--YL 417 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +D +TV ++ LP +++P K GLQ+ +E + + Sbjct: 418 SDAYTVGFSLGQLPTLTIP-----KGTSTGLQISAAKKNDELVIQFANFL 462 >gi|209522351|ref|ZP_03270969.1| Amidase [Burkholderia sp. H160] gi|209497210|gb|EDZ97447.1| Amidase [Burkholderia sp. H160] Length = 296 Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 121/293 (41%), Positives = 186/293 (63%), Gaps = 16/293 (5%) Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL---------DQ 259 I+FA SLDQ G + ++ D A LL A+AG+DE D+T ++ DY R L D+ Sbjct: 1 IAFASSLDQGGPMAQSAADCATLLNAMAGFDERDSTSLSHEREDYTRYLGKSWRDGGADK 60 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 + G+ +G+PKEY L+ + + + + GA +VE+SLP T+ ++P YY+I+P Sbjct: 61 PLAGLRIGLPKEYFGAGLADDVRASIDAALKQYEALGATLVEVSLPKTELSIPVYYVIAP 120 Query: 320 AEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 AEASSNL+R+DGVR+G R E +D+L+MY+ +R+ GFG EVK RI++GTYVLS YD++ Sbjct: 121 AEASSNLSRFDGVRFGHRAAEYRDLLDMYKKSRAEGFGPEVKRRILVGTYVLSHGYYDAY 180 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 YL+A+KIR +I +DF EAF+Q DVI+ P P+ A+ +G + ++ M D++T++V Sbjct: 181 YLQAQKIRRIIAQDFQEAFKQ-CDVIMGPVAPSVAWDIGAKGDDPVQM--YLADIYTLSV 237 Query: 439 NMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ++AGLP +SVP + P+GLQ+IG F E + V ++ + R Sbjct: 238 SLAGLPGMSVPCGFGAGANAQRPVGLQIIGNYFNEARMLQVADAFQRATDWHR 290 >gi|255711802|ref|XP_002552184.1| KLTH0B09152p [Lachancea thermotolerans] gi|238933562|emb|CAR21746.1| KLTH0B09152p [Lachancea thermotolerans] Length = 465 Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 140/422 (33%), Positives = 226/422 (53%), Gaps = 23/422 (5%) Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K + + + L + GIKD AT + T S +L ++ +++T+ + L GA+ +G Sbjct: 36 KDVSSSPKKSLTNLLYGIKDNIATSDMPTSCGSKVLHNYQSPFDATIVELLESAGAISVG 95 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+DEF MGS S++GP +P T S + AA A SIGTDT Sbjct: 96 KTNLDEFGMGSGGLFSHFGPTKNPLFPFQDTVVGGSSSGSAAAVAADAVDF---SIGTDT 152 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA++T G KP+YGR SR G+I++A S+D GI ++ V + + +D+ Sbjct: 153 GGSVRLPAAYTSLFGFKPSYGRISRFGVIAYAQSMDTVGIFSKNVSIIKSVFDVLDKHDK 212 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T ++ + R L +GIP+E D + + + + L+ G +I Sbjct: 213 KDPTSLSENLRGKLRQLSSPQSSYKIGIPQELLQDNMPLELQDGFLLALEKLEANGHEIY 272 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGFGQE 358 +S+P +LP YY ++PAEA+SNLAR+DG+RYG R + D + ++ TRS FG E Sbjct: 273 GVSIPQMVNSLPIYYTLAPAEAASNLARFDGLRYGYRDDVADSRDDTLFAPTRS-AFGDE 331 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF------------EQGVDVILT 406 VK RI++G Y L S +++HY++A+++R + +F F + GVD +++ Sbjct: 332 VKSRIVLGNYNLCSESFNNHYIKAQRLRVDLINEFDNTFTHPNILTGFPGNQNGVDFLIS 391 Query: 407 PTTPTSAFPLGKEENN--SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 ++ + +++ S NDVFT +++AGLPAI+VP P+G+QL+ Sbjct: 392 FSSINLPPAMSDYDSDCTSNPTNSYVNDVFTTPMSLAGLPAINVPVMASN---PIGIQLV 448 Query: 465 GQ 466 GQ Sbjct: 449 GQ 450 >gi|6225048|sp|O69768|AMID_PSEPU RecName: Full=Amidase gi|3172139|gb|AAC18422.1| amidase [Pseudomonas putida] Length = 466 Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 163/498 (32%), Positives = 262/498 (52%), Gaps = 47/498 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + +++ +L+++++SAVE++D+ + + ++ Q++AY+ V+ +ARAAA +D Sbjct: 1 MSSLTRLTLAQVAQKLKAREVSAVEVLDACLTQVRSTEKQISAYVCVLEDQARAAAHATD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACS--HILDGFRPHYESTVTQKLWDNGAVM 118 I L G+P+ +KD + G+ T A S H LD + ++L D GAV+ Sbjct: 61 ADIRGRWKGPLHGVPVAVKDLYDIAGVPTTASSPAHELDA---QQDPARVRRLQDAGAVI 117 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK + EFA G I+P TPGGSSGGS+A VA + GT Sbjct: 118 LGKTHTHEFAYGR----------ITPKSRNPRDPGRTPGGSSGGSAATVAACCVYLATGT 167 Query: 179 DTGGSIRQPASFTGTVGIK-PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 DTGGS+R P+S TVG+K PT GR G+ S + SLD G ITRTV D+A++L+ +AG Sbjct: 168 DTGGSVRIPSSMCNTVGLKQPTVGRVHGAGVSSLSWSLDHPGPITRTVEDTALMLQVMAG 227 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 +D D ++ PVP Y L Q ++G+ G+PK Y D + P ++ + I LK+ GA Sbjct: 228 FDPADPRSLDEPVPSYAEGLGQGVKGLRWGVPKNYFFDRVDPEVESAVRAAIDQLKELGA 287 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++VE+ +P + +P + I EAS+ Y R ++ E+Y Sbjct: 288 ELVEVEVPMAEQIIPVKFGIMLPEASA----YH------RTMLRESPELYT--------A 329 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 +V+ + +G V + + YL+A+++RTL++R E + Q +DV++ PT P A G Sbjct: 330 DVRILLELGDLVTA-----TDYLQAQRVRTLMQRAVAEMY-QRIDVLIAPTLPIPAARSG 383 Query: 418 KEENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 EE ++ G + V FT N+ GLP +++P + + + G+P E+T Sbjct: 384 -EEVHTWPDGTVEALVMAYTRFTSFGNVTGLPTLNLPCGFSKDGLRSACR-SGRPLDEKT 441 Query: 473 LFSVGQIIEKEAGYFRPH 490 L G EK + + H Sbjct: 442 LLRAGLAYEKATTWHQRH 459 >gi|148377979|ref|YP_001256855.1| amidase [Mycoplasma agalactiae PG2] gi|148292025|emb|CAL59417.1| Glutamyl tRNA(GLN) amidotransferase subunit A [Mycoplasma agalactiae PG2] Length = 437 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 149/424 (35%), Positives = 229/424 (54%), Gaps = 23/424 (5%) Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 D++I GD L IKD +AT+ T A S IL+ F PHY +TV QKL D GAV + Sbjct: 29 DEKIKVGDGI-LNECVFTIKDNYATESKKTTASSKILENFMPHYNATVVQKLLDAGAVPV 87 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K++ DE A+G + + S +G V +P+ S GGSS GS A + + A S+G+D Sbjct: 88 AKVHCDELALGGTGKHSAFGLVTNPFDSSR-----LAGGSSSGSVATLTKNV-AFSLGSD 141 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TG S+R PAS+ G VG KP+YG SR G+ +FA SLD V D A L + G D Sbjct: 142 TGDSVRLPASYNGLVGFKPSYGAISRFGLFAFASSLDTVAYFAHNVSDIATLSHIVFGKD 201 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAK 298 D T +N+ + D ++A Q I + V +E+ +DK +++ I L A + Sbjct: 202 PRDMTSLNIKINDVKKAKPQKIGILNVHGLEEF--------VDKKYKELIRELSKATNVE 253 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +V+I+ + P Y IIS +EASSNLA +G+ +G R +G + E+ NTR+ GFG+ Sbjct: 254 LVDINETLFKAIKPVYEIISYSEASSNLANLNGIAFGSRKDGSNWEEIMTNTRAEGFGEM 313 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V+ R+ +G++ L S+ + L+A+K+R LIK ++ + D+++ P A + Sbjct: 314 VQLRLALGSFFLHSKNQEEMILKAQKVRRLIKEHL-DSIHKRFDIVIYPCAADYAPYIDD 372 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +N S H Y D N+AG P++S+P + + + L + + + +E L S Sbjct: 373 SKNKS----HGYMDYILTGANLAGNPSLSIP--WIKDNLFVNLSIDSKIYDDEKLLSHAL 426 Query: 479 IIEK 482 IEK Sbjct: 427 WIEK 430 >gi|150401431|ref|YP_001325197.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcus aeolicus Nankai-3] gi|150014134|gb|ABR56585.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanococcus aeolicus Nankai-3] Length = 434 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 167/459 (36%), Positives = 246/459 (53%), Gaps = 36/459 (7%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEE--SDKRIINGDARDLEGIPIGIKDCFATKGI 87 YI+ IE S+ +NA I++ +K A+E +++++ N + L G I IK KG Sbjct: 10 YIEKIEKSD--INAIIQLDKEKVLNEAKELENNEKLKN---KPLYGKIIAIKSNINVKGY 64 Query: 88 HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRS 147 + S L+ + Y++TV +K+ G +++G NMDEFA GSS ETSYYG +P Sbjct: 65 NISCASKTLENYISAYDATVVKKIKSQGGLIIGMTNMDEFASGSSGETSYYGATKNP--- 121 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + + PGGSS GS++AVAG LC ++G+DTGGSIR PAS G VG KP+YG SR G Sbjct: 122 --NAEGKIPGGSSSGSASAVAGDLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVVSRQG 179 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVG 267 + A S DQ G +T++ D+ +L I G D D+T V P +E+ ++ ++ VG Sbjct: 180 LCDLAMSFDQIGPLTKSAEDALLLTNIIKGKDLSDSTTVE--TPKFEKN-EKQVKKYKVG 236 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 I KE+ ++ I ++GI KD G KIVE++ +T ALP YY+I+ E S Sbjct: 237 IVKEF-MEVSDEKIRNKIEEGIEVFKDMGCKIVELNYKYTDLALPTYYLINYVEFFSATR 295 Query: 328 RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 +YDG RYG +E G+EV RI+IG ++ +Y +A R Sbjct: 296 KYDGRRYGYPIEEV-------------CGEEVLRRILIGKHISEQEFSGKYYKKALYTRK 342 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 L+K + + F VD+I++PT P +GKE M DV TV N+ G+ A Sbjct: 343 LMKNEMLKLFND-VDIIVSPTVPKLPHNIGKELT---PMEMYSYDVLTVPTNICGICAGV 398 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 V P+GLQ+ G+PF +E + + +IE E Y Sbjct: 399 VKCGNIAGN-PVGLQIQGKPFDDEKVLNA--MIEFEKQY 434 >gi|190346777|gb|EDK38944.2| hypothetical protein PGUG_03042 [Meyerozyma guilliermondii ATCC 6260] Length = 470 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 147/437 (33%), Positives = 228/437 (52%), Gaps = 32/437 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ +KD F T T + S +L + +++T + +GA ++GK NMDEF MG Sbjct: 44 LAGLKAAVKDNFVTTKEPTTSGSEMLRTYVSPFDATTVSLIEASGAKVVGKTNMDEFGMG 103 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SSN S +G V++P + + GGS+ + A F ++GTDTGGS+R PAS+ Sbjct: 104 SSNTNSAFGSVVNPMFPENHISGGSSGGSAAAVALREADF----ALGTDTGGSVRLPASY 159 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G KPTYGR SR G+I++A SLD GI R + + + D D TC + + Sbjct: 160 CGVYGFKPTYGRISRWGVIAYAQSLDTVGIFARDLDTVRSVFDVLDVADSKDPTCFDASI 219 Query: 251 PDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ + +++Q V G+P+E+ + ++ W + L D G +I IS+P + Sbjct: 220 -RHQISHQKNLQSSKVIGVPEEFVVAEMTEEAKDAWNSALCALVDEGYEIRYISIPTIKK 278 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM-----YENTRSIGFGQEVKHRIM 364 +L AYY I+ AEA+SNL+RY+GVRYG + ++ M RS FG EV+ RI+ Sbjct: 279 SLSAYYTIATAEAASNLSRYEGVRYGYSISSEETASMTPFDIVSKNRSTAFGSEVQRRII 338 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-------------EQGVDVILTPTTPT 411 +G Y LSS +HYLRA +R + +F + F G +L PT + Sbjct: 339 LGNYTLSSDS-GNHYLRATHVRKNLVAEFNKVFSMPNVLFDNEVYNRDGCCALLCPTAVS 397 Query: 412 SAFPLGK--EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 A L + +E N + ND+ TV ++AGLP+IS+P + G+Q++GQ Sbjct: 398 PAPSLAEYTQETNENFLNAYINDILTVPASLAGLPSISIPYYSRQ-----GIQIMGQFGD 452 Query: 470 EETLFSVGQIIEKEAGY 486 +ET+ V + + Y Sbjct: 453 DETVLKVAKTLSLNCTY 469 >gi|45359073|ref|NP_988630.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcus maripaludis S2] gi|74553633|sp|Q6LX43|GATA_METMP RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|45047948|emb|CAF31066.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Methanococcus maripaludis S2] Length = 431 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 168/460 (36%), Positives = 240/460 (52%), Gaps = 34/460 (7%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG 86 V Y++ IE S+ +NA+I+V +K AEE +K + + L G + +K KG Sbjct: 6 VSDYLEKIEKSD--VNAFIDVNGEKVLKEAEELEKNDTLKN-KPLYGKIVAVKSNINVKG 62 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 S L+ + Y++TV +KL GA+++G NMDEFA GSS ETS YGP +P Sbjct: 63 YKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPA- 121 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 +MD PGGSS GS+AAVA LC +IG+DTGGSIR PAS G VG KP+YG SR Sbjct: 122 AMDRI----PGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQ 177 Query: 207 GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTV 266 G+ A S DQ G +T+ D+ +L AI G D D+T +L P +E+ + I + Sbjct: 178 GLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDST--SLETPKFEK---KDISNYKI 232 Query: 267 GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 G+ KE+ +D I ++GI KD G KIV++S + ALP YY+I+ E S Sbjct: 233 GVVKEF-MDVTDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFFSAT 291 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 +YDG RYG +E G+EV RI+IG ++ +Y +A + R Sbjct: 292 RKYDGRRYGEFIEE-------------ACGEEVLRRILIGKHISEQEFSGKYYKKALQAR 338 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 +K++ F D+I+ PT P LG+ + M DV TV N+ G+ + Sbjct: 339 KSMKKEMLGLF-NSADLIVGPTVPKLPHKLGE---DVSPMEMYAYDVLTVPTNICGICSG 394 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 V +P+GLQ+ G P +E + S +IE E Y Sbjct: 395 VVRCGNIS-GVPVGLQIQGAPLEDEKVLSA--MIEFEKNY 431 >gi|83320039|ref|YP_424670.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283925|gb|ABC01857.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 485 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 158/499 (31%), Positives = 244/499 (48%), Gaps = 36/499 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI--ENSNSQMNAYIEVVAQKARAAAEE 58 M + ++ E L K + ++L ++ + E ++ +N E+ A K EE Sbjct: 1 MQDYRKKSIFEIHQDLVDKKYTVLDLTKEVLKNLKYELDSNAINYLAEIHALKQAKKVEE 60 Query: 59 SDKRIINGDARDLE-GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 N D +L GIP KD F+T+ I T A S IL+ + P+Y + + L N ++ Sbjct: 61 ------NFDKNNLLCGIPYICKDNFSTRDIPTTASSKILENYIPNYSAALVDSLDKNQSI 114 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK +DE MG + S G + +PW GGSS GS+ VA L + G Sbjct: 115 LVGKSALDELGMGGTGLLSCNGKITNPWDK-----NRIVGGSSSGSAYLVAKGLVPFATG 169 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTG SIR+PAS+ G VG KPTYG SR G++ +APSLD AG T+ V D A+L A Sbjct: 170 TDTGDSIRKPASYNGIVGFKPTYGVISRYGLLPYAPSLDTAGFFTKNVDDMAVLCDACYD 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-------IS 290 D D D+ + ++ + G Y++ ID Q+ Sbjct: 230 NDNRDFASTTADHFDFLKQINDFSKIKAFG--------YITSVIDNLDQEHKNQYYKLFE 281 Query: 291 WLKDAGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 LK+ G ++ + + LP Y +I+ +E+ S + DG++YG R +G D E+ Sbjct: 282 ILKNKGYQVKALDFRQDLLEAVLPVYLMIANSESVSTNSCLDGIKYGKRADGNDYNEIMI 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N+R+ GFG+ V+ R IG+ VL + + ++A+K+RTLI RDF FEQ VDV+L P Sbjct: 342 NSRTQGFGEIVRRRFAIGSLVLKGENQEKYLVQAKKVRTLINRDFNNLFEQ-VDVLLLPP 400 Query: 409 TPTSAFPLGKEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + A PL +E N H + D V N G P+I++P K MP+G+ + + Sbjct: 401 SLNIA-PLIEEITNPNKKSHEKDFIDNILVLANFTGTPSITIPFFEI-KNMPVGINITTK 458 Query: 467 PFREETLFSVGQIIEKEAG 485 + +++E G Sbjct: 459 VKTDLLTLQAAKLLENIIG 477 >gi|146418695|ref|XP_001485313.1| hypothetical protein PGUG_03042 [Meyerozyma guilliermondii ATCC 6260] Length = 470 Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 147/437 (33%), Positives = 227/437 (51%), Gaps = 32/437 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ +KD F T T + S +L + +++T + +GA ++GK NMDEF MG Sbjct: 44 LAGLKAAVKDNFVTTKEPTTSGSEMLRTYVSPFDATTVSLIEASGAKVVGKTNMDEFGMG 103 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SSN S +G V++P + + GGS+ + A F ++GTDTGGS+R PAS+ Sbjct: 104 SSNTNSAFGSVVNPMFPENHISGGSSGGSAAAVALREADF----ALGTDTGGSVRLPASY 159 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G KPTYGR SR G+I++A SLD GI R + + + D D TC + + Sbjct: 160 CGVYGFKPTYGRISRWGVIAYAQSLDTVGIFARDLDTVRSVFDVLDVADSKDPTCFDASI 219 Query: 251 PDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ + +++Q V G+P+E+ + ++ W + L D G +I IS+P + Sbjct: 220 -RHQISHQKNLQSSKVIGVPEEFVVAEMTEEAKDAWNLALCALVDEGYEIRYISIPTIKK 278 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM-----YENTRSIGFGQEVKHRIM 364 L AYY I+ AEA+SNL+RY+GVRYG + ++ M RS FG EV+ RI+ Sbjct: 279 LLLAYYTIATAEAASNLSRYEGVRYGYSISSEETASMTPFDIVSKNRSTAFGSEVQRRII 338 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-------------EQGVDVILTPTTPT 411 +G Y LSS +HYLRA +R + +F + F G +L PT + Sbjct: 339 LGNYTLSSDS-GNHYLRATHVRKNLVAEFNKVFSMPNVLFDNEVYNRDGCCALLCPTAVS 397 Query: 412 SAFPLGK--EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 A L + +E N + ND+ TV ++AGLP+IS+P + G+Q++GQ Sbjct: 398 PAPSLAEYTQETNENFLNAYINDILTVPASLAGLPSISIPYYSRQ-----GIQIMGQFGD 452 Query: 470 EETLFSVGQIIEKEAGY 486 +ET+ V + + Y Sbjct: 453 DETVLKVAKTLSLNCTY 469 >gi|269837849|ref|YP_003320077.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269787112|gb|ACZ39255.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 547 Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 163/489 (33%), Positives = 256/489 (52%), Gaps = 45/489 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E + ++E RLR+ ++S VEL + I + ++N++ V+A +A AAA E+++ Sbjct: 94 EPGYETLAEVAARLRTGEVSPVELTQQALDRIAERDGELNSFQLVLADEALAAAREAERE 153 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I + R L G+P+ +KD A KG T A S IL + +++ ++L + GAV++GK Sbjct: 154 IAADNWRGPLHGVPVAVKDLLAMKGTVTTAGSKILADWVTDFDAAAVERLREAGAVIVGK 213 Query: 122 LNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 M EFA + ++YGP +PW R DS + GS AAVA + ++G+DT Sbjct: 214 TRMSEFAYSPGSNNAHYGPTPNPWNREHDSAGSSS------GSGAAVADGMVYGALGSDT 267 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA G VG+KPT+GR S G ++ + SLD G +TR+VRD+A +L+ +AG+D Sbjct: 268 GGSIRMPAGVCGIVGLKPTFGRVSLHGAVTLSWSLDHLGPMTRSVRDAAAMLQILAGHDP 327 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAGAK 298 D +PVPDY LD + G+ +G+ +E + + W+ G++ L+ GA+ Sbjct: 328 RDLRARAVPVPDYSAQLDAGVAGLRIGVLREDGSGMPLGTDEALAAWRAGLAALERNGAE 387 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VEI +P Q A +++ A + A Y E R FG Sbjct: 388 LVEIDIPEMQ----ALRVLNSAIIAMEAATYH--------------EPNLRERLDDFGDF 429 Query: 359 VKHRIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++HR VLS+ Y L +A++ R ++R FE+ VD++ TPT P A LG Sbjct: 430 MRHR------VLSAYGYGPLALVKAQQARAALRRRLDAIFER-VDLLSTPTLPYGAPRLG 482 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N+ VFT N G PAI+VP +++PLGLQL G+P+ E T+ Sbjct: 483 DPSRNT---------VFTSPFNALGWPAITVPVGRTAERLPLGLQLAGRPWDEVTVLRAA 533 Query: 478 QIIEKEAGY 486 ++E + + Sbjct: 534 AVVEADGPW 542 >gi|297619605|ref|YP_003707710.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanococcus voltae A3] gi|297378582|gb|ADI36737.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanococcus voltae A3] Length = 433 Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 164/449 (36%), Positives = 242/449 (53%), Gaps = 36/449 (8%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA---RDLEGIPIGIKDCFATKG 86 Y++ IE S+ +NA+IEV ++ A++ +K DA + L G IGIK +G Sbjct: 9 YLEKIEKSD--LNAFIEVKPERVLKEAQDLEKN----DALKNKPLYGKIIGIKSNINVEG 62 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 S L + Y++TV +KL GA+++G NMDEFA GSS ETSYYGP + Sbjct: 63 YTISCASKTLSNYIGTYDATVIKKLKSQGALIIGMTNMDEFASGSSGETSYYGPT----K 118 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 + + D+ PGGSS GS++AVAG LC ++G+DTGGSIR PAS G VG KP+YG SR Sbjct: 119 NAAALDRI-PGGSSSGSASAVAGDLCDMTLGSDTGGSIRNPASHCGVVGFKPSYGVVSRQ 177 Query: 207 GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTV 266 G+ + SLDQ G +T+T D+ +L AI G D + T +L P + + ++ ++ V Sbjct: 178 GLCDLSMSLDQIGPLTKTAEDALLLTNAIKGKDISETT--SLSTPKFNKNTEE-VKNYKV 234 Query: 267 GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 G+ KE+ +D I ++GI L+D G +IVE++ +T ALP YY+I+ E S Sbjct: 235 GVVKEF-MDITDEKIRNNIEKGIQALEDVGCEIVELNYNYTDIALPTYYLINYVEFFSAT 293 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 +YDG RYG +E G+EV RI+IG + +Y +A + R Sbjct: 294 RKYDGRRYGYPIEE-------------ACGEEVLRRILIGKTISEQEFSGKYYKKALQAR 340 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 +K + + F++ VD+I T P LG+E +M DV TV N+ G+ A Sbjct: 341 RTMKAEMIKFFDK-VDIIAGSTVPKLPHKLGEE---ISTMDMYAYDVLTVPTNLCGMCAG 396 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFS 475 V +P+GLQL G P +E + + Sbjct: 397 VVRCGDI-NGIPVGLQLQGAPLSDEKVLN 424 >gi|299473649|emb|CBN78043.1| glutamyl tRNA amidotransferase, subunit A, n-terminal region [Ectocarpus siliculosus] Length = 357 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 138/339 (40%), Positives = 206/339 (60%), Gaps = 18/339 (5%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--- 67 E+ + +RS +S+ ELV ++ +E + A++ V + A A D+++ G Sbjct: 12 EAAEAVRSGRVSSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKET 71 Query: 68 -ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+P+G+KD T G+ T A S IL+G+RP Y+++ KL G + LGK NMDE Sbjct: 72 LALPLLGVPMGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDE 131 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + MGS+ ETS + +P R++D PGGSSGGS+AAVA + ++GTDTGGS+RQ Sbjct: 132 YGMGSTTETSAFQVTRNP-RNID----HAPGGSSGGSAAAVAAGVVTGALGTDTGGSVRQ 186 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC-DATC 245 PAS+ G VG+KPTYGR SR G+I++A S D G I +V D A LL A+AG D D+T Sbjct: 187 PASWCGVVGLKPTYGRLSRKGLIAYASSTDCIGPIASSVADCAALLGAVAGEDRAGDSTA 246 Query: 246 VNLPVPDYERALDQS--------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + PVPDY L +S ++G+ +G+ +E ++ + P + ++ I + GA Sbjct: 247 LQQPVPDYTALLKESAASGGSRPLEGIKMGVIREALVERVQPDVAAAVKEAIDTMASLGA 306 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 ++ E+SLP AYY+ + +EAS+NLAR+DG+RYGL Sbjct: 307 EVTEVSLPSLPEQCAAYYVTALSEASANLARFDGIRYGL 345 >gi|294659972|ref|XP_462424.2| DEHA2G20284p [Debaryomyces hansenii CBS767] gi|199434372|emb|CAG90934.2| DEHA2G20284p [Debaryomyces hansenii] Length = 490 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 149/422 (35%), Positives = 224/422 (53%), Gaps = 32/422 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G KD AT T S +LD + +++TV L + G+ M+GK N+DEF MG Sbjct: 54 LSGTTFIAKDNIATTKEPTTCASCMLDNYYSPFDATVISLLEEQGSTMVGKANLDEFGMG 113 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+N SYYG ++P + + ++ GGSSGGS+A++ L S+GTDTGGS+R PAS+ Sbjct: 114 SANVNSYYGHAVNP---LFTEEEHITGGSSGGSAASIQSDLATFSLGTDTGGSVRLPASY 170 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTYGR SR G+I +A SLD GI+ + V + K + +D D T + Sbjct: 171 CGIVGLKPTYGRISRWGVIPYAQSLDTVGILAKDVETVQKVFKVLDKHDPKDPTSLPTEF 230 Query: 251 PDYERALDQSIQG----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + + Q Q + G+P E+ + LS + W +S ++D G + +S+P Sbjct: 231 REELKKEKQKYQKNRSQLVFGVPDEFLVAELSQGTREHWSHMLSTIQDMGHIVRRVSIPS 290 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDI-LEMYENTRSIGFGQEVKHRIM 364 + ++ AY ++ AEASSNL+RYDGVR+G KD LE+ RS G EV+ RI+ Sbjct: 291 IKKSISAYLALATAEASSNLSRYDGVRFGFNTNNLKDSPLELIAENRSTSLGLEVQRRII 350 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE--------------QGVDVILTPTTP 410 +G Y +S+ +HY +A R I D+ E + D+I+TPT Sbjct: 351 LGNYTMSAGS-GNHYFKATDERRDIVEDYNEILNFPNLLMNEPGESSSEKCDIIVTPTAM 409 Query: 411 TSAFPLGKEE----NNSGSMGHIYNDVFTVAVNMAGLPAISVP--AALCEKKMPLGLQLI 464 + PL EE + + ND+ TV ++AG+PAIS+P + +P G+ L+ Sbjct: 410 SG--PLSVEEYLRHDRENFLNSYVNDILTVPASLAGMPAISIPWNTPGTDSSIPQGMHLM 467 Query: 465 GQ 466 Q Sbjct: 468 AQ 469 >gi|219122484|ref|XP_002181574.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406850|gb|EEC46788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 470 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 175/462 (37%), Positives = 239/462 (51%), Gaps = 46/462 (9%) Query: 56 AEESDKR-IINGDARDLEGIPIGIKDCFATKGIHTQACSHIL------------DGFRP- 101 AE SD R + N L+GIP+ IK A + A S IL DG P Sbjct: 18 AEASDARWMTNRPLSLLDGIPVTIKANLALETQPLTAGSRILGASAAVPSHVTSDGTPPV 77 Query: 102 HYESTVTQKLWDNGAVMLGKLNMDEFAMGS-SNETSYYGPVISPWRSMDSTDKFTPGGSS 160 Y + Q L D GA++LG +MDEF MGS T+ + V+S + F+ GGSS Sbjct: 78 GYTADAVQSLIDGGAIILGVTSMDEFGMGSLGTNTATHAAVLS-----EDDHGFSAGGSS 132 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GSS +VA S+G+DTGGS+R PA++ G VG+KPTYG SR G++S+A SLD GI Sbjct: 133 CGSSVSVAHGSSLLSLGSDTGGSVRLPAAWCGVVGLKPTYGHISRHGLVSYASSLDTIGI 192 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA----LDQS--IQGMTVGIPKEYRL 274 + T +I L+ I D +P+P Y R+ LD S + G+ +GIP + + Sbjct: 193 MGPTADCVSIGLQQIVNNQRRDRDSTLVPLP-YVRSIAENLDSSLALDGIKIGIPAAFSV 251 Query: 275 DYLSPTIDKTWQQGISWLKDAGAKIV-----EISLPHTQYALPAYYIISPAEASSNLARY 329 L + W L GA + IS Q AL AYYII+ AEA SNL+RY Sbjct: 252 AELPDNVRDAWSASADHLASHGATVEIVGSDAISPDTLQRALAAYYIIASAEAGSNLSRY 311 Query: 330 DGVRYGLRVEGK--------DILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 DG RYG+ E K +LE Y +RS GFG EV R++ GT VLS+ + ++Y Sbjct: 312 DGFRYGVSAEVKCNTMNNPQSMLERQYATSRSYGFGSEVVRRVLCGTAVLSADRFHTYYE 371 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 A ++R + F +A EQ DV+L PT AFP + + S + ND TV +++ Sbjct: 372 SAAELRAFLTEQFEKATEQ-YDVLLVPTV---AFPPAPLDRTTNSTQTLANDAMTVPISL 427 Query: 441 AGLPAISVPAALCEKKM-PLGLQLIGQPFREETLFSVGQIIE 481 GLPA+SVP ++ P +QLIG F EE L V ++ Sbjct: 428 TGLPAVSVPFERPTSQLFPPSMQLIGPRFGEEKLLKVAALLN 469 >gi|320585913|gb|EFW98592.1| glutamyl-tRNA amidotransferase [Grosmannia clavigera kw1407] Length = 625 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 171/512 (33%), Positives = 248/512 (48%), Gaps = 97/512 (18%) Query: 76 IGIKDCFAT--KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 + +KD AT G+ T S +L G+ +E+T+ +L GAV++GK NMDEF MGS + Sbjct: 110 LAVKDNIATTGSGLTTTCASGMLAGYVSPFEATIVGQLRTRGAVVVGKTNMDEFGMGSHS 169 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 S+ G V + + + D + GGSSGGS+ AV ++GTDTGGS+R PA++ G Sbjct: 170 VYSHAGRVAAD-TTRQADDALSVGGSSGGSAVAVRLGDVDVALGTDTGGSVRLPAAYGGI 228 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG--YDECDATCVNLPVP 251 VG KP+YG SR G++ +A SLD G++ V L+ G + E D C + Sbjct: 229 VGFKPSYGMLSRFGVVPYANSLDTVGLLATDVGPIQRLIVGEPGGLWQEADTGCDPTSLS 288 Query: 252 --------------------DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 R + Q + G++ GIP EY + L P I W + Sbjct: 289 RSTRLRLAAQRQGYGGRQEEQGNRDVSQPLLGLSFGIPLEYNIAELDPRIRAAWTAAATR 348 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-----EGKDILE- 345 L+ GA + +SLP T++AL AYY+I+PAEA+SNLARYDGVRYG + G++ + Sbjct: 349 LRLLGASVAAVSLPSTRHALSAYYVIAPAEAASNLARYDGVRYGGKSGRSGQTGQNKRQN 408 Query: 346 -----------------MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 +Y++ R G G E + RI++G Y LSS D+++L+A+++R L Sbjct: 409 DSPSDSQNDDNNNEDPVLYQHVRGAGLGPEAQQRILLGAYALSSAARDNYFLQAQRVRRL 468 Query: 389 IKRDFTEAF-----------EQG----------------------------VDVILTPTT 409 + RDF F E G VD +L PT Sbjct: 469 VVRDFDAVFRLANPLRDPDAEAGTTETNAGAINLSDLPEGLPLADRRGPAQVDFLLCPTA 528 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA-ALCEKKMPLGLQLIGQPF 468 PT A L + NDVFTV ++AGLPAIS+PA + GLQL+GQ + Sbjct: 529 PTPAPRLANVVAAPSHVDAYMNDVFTVPASLAGLPAISIPAPSTATTSFCPGLQLVGQFW 588 Query: 469 REETLFSVGQIIEKEAGYFRP--------HKW 492 + L V + + EA + P H+W Sbjct: 589 DDARLLRVAETL-MEAAFELPEDREALQRHRW 619 >gi|113954769|ref|YP_731867.1| enantiomer-selective amidase [Synechococcus sp. CC9311] gi|113882120|gb|ABI47078.1| enantiomer-selective amidase [Synechococcus sp. CC9311] Length = 471 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 176/486 (36%), Positives = 255/486 (52%), Gaps = 37/486 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + ++ ++LRSK +S V+L + + IE N +NA+I V A+ A A+A ++ Sbjct: 6 ELTTLTLQDASEQLRSKRLSPVDLTHACLSRIERLNPLLNAFITVSAESALASARTAEAE 65 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIPI +KD F T + T A S + P ++ V +KL D GAV+LGK Sbjct: 66 IQRGHWRGPLHGIPIALKDLFDTADVRTTAASALFKDRVPKEDAEVVKKLKDAGAVLLGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NM EFA G+++ SY+G V +PW D+T GGSSGGS+ AVA LC A++G+DT Sbjct: 126 TNMQEFAYGATSAGSYFGAVRNPW---DATR--ISGGSSGGSAVAVAAGLCFAALGSDTA 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 SIRQPA++ G VG+KPTYG S G+I + + D G + RTV DSA+LL+AIAG D Sbjct: 181 ASIRQPAAYCGIVGLKPTYGLVSARGVIPLSWTFDHVGPLARTVTDSALLLQAIAGNDHA 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D ++P+PDY AL + VG+ + + + L P ID+ + + LK A + + Sbjct: 241 DIGGRSMPIPDYGAALLDKASPLRVGVARAFFFEDLDPEIDQAVTEALRVLKRLAASLSD 300 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP T AL L VR G E E + + E Sbjct: 301 VVLPGTAQAL--------------LDLRATVRAG---EAYAYHEAFVQKSPELYQPETLR 343 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---GK 418 R+ V ++ Y+R R+ LI+R EAF + VDVI+TPTTP L GK Sbjct: 344 RLRADAAVNTA-----SYVRGRQEVELIRRTSGEAF-KSVDVIVTPTTPIPPPLLAEVGK 397 Query: 419 EENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + S ++G I N T N+ G P ISV +P+GLQ+ G + ++ + Sbjct: 398 DVETSMTLGTRTIRN---TAPFNLLGWPTISVQCGFTSAGLPIGLQISGPSGADTSVLKL 454 Query: 477 GQIIEK 482 + E+ Sbjct: 455 ARAYEQ 460 >gi|302549907|ref|ZP_07302249.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces viridochromogenes DSM 40736] gi|302467525|gb|EFL30618.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces viridochromogenes DSM 40736] Length = 473 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 158/481 (32%), Positives = 255/481 (53%), Gaps = 39/481 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +S + D +R++ +S VEL DS ++ +E + AY+ V A++ R AA E+ I G Sbjct: 6 LTLSAAADEIRARRLSPVELADSVLERVERVEPHLGAYVTVRAERVRRAAREAADDIAAG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L GIP+G+KD G+ T A S + G R +STV +L D GAV++GK + Sbjct: 66 RHRGPLHGIPMGLKDLIDVAGLPTSASSRVRSGHRAPADSTVAARLSDAGAVLVGKTHTH 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G + + P R GGSSGGS+ AVA ++GTDTGGSIR Sbjct: 126 EFAYGLTTPQTRN--AWDPGR--------VAGGSSGGSAVAVAAGTATFALGTDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG+KPTYG R G+ S + SLD G +TRTV D+A++L A+AG+D D+ Sbjct: 176 VPAALNGVVGLKPTYGLVPRHGVTSLSWSLDHVGPLTRTVEDAALVLAAVAGHDPRDSAS 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + P Y D + G+ +G+P+ Y D + P ++ ++ I L+ GA++V++ +P Sbjct: 236 LATPPARYLPGPDTDLTGLRIGVPRTYYFDRVDPEVEAAVRRAIGQLEALGARLVDVEIP 295 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +Y P + + EA++ D +R + E+Y++ +V+ + Sbjct: 296 MARYVKPTQWGLMVPEATAY--HEDTLRT--------VPELYQD--------DVRVLLEA 337 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--S 423 G + + YLRA++ RTL+++++ E + VD+I P P +A G+E Sbjct: 338 GELMPA-----GDYLRAQRSRTLMRQEW-ERVLRDVDLIAAPAVPVTAVEAGQEAITWAD 391 Query: 424 GSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G++ + + + N+ G+PA+SVP +P+G+QL+G+P E L VG E Sbjct: 392 GTVEDVADAYVRLSAPANITGVPALSVPVGHDTAGLPIGMQLLGRPLGESLLLRVGHAYE 451 Query: 482 K 482 + Sbjct: 452 Q 452 >gi|150399573|ref|YP_001323340.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcus vannielii SB] gi|166217684|sp|A6UQF6|GATA_METVS RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|150012276|gb|ABR54728.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanococcus vannielii SB] Length = 431 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 161/462 (34%), Positives = 243/462 (52%), Gaps = 38/462 (8%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAE--ESDKRIINGDARDLEGIPIGIKDCFAT 84 V Y++ IE S+ +NA+I++ ++ A+ E ++++ N + L G I +K Sbjct: 6 VSDYLEKIEKSD--INAFIDLNGERVLKEAKDLEKNEKLKN---KSLYGKIIAVKSNINV 60 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 +G S LD + Y++TV +KL GA+++G NMDEFA GSS ETSYYGP +P Sbjct: 61 EGYKISCASKTLDNYTGTYDATVIKKLRSEGALIIGMTNMDEFASGSSGETSYYGPTKNP 120 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 +++D PGGSS GS+AAV+ LC ++G+DTGGSIR PAS G VG KPTYG S Sbjct: 121 -KALDRI----PGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPTYGVVS 175 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 R G+ A S DQ G +T+T DS L I G D + T +L P +E+ + I+ Sbjct: 176 RQGLCDLAMSFDQIGPLTKTAEDSLNLTNVIKGLDLSNTT--SLKTPKFEK---KEIKDY 230 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 +G+ +E+ +D I ++GI +D G +IV++S + ALP YY+I+ E S Sbjct: 231 KIGVVREF-MDVTDEKIRNEIEKGIEVFRDLGCEIVDLSYKYIDLALPTYYLINYVEFYS 289 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 +YDG R+G +E G+EV RI+IG ++ +Y +A + Sbjct: 290 ATRKYDGRRFGEVIEE-------------ACGEEVLRRILIGKHISEQEFSGKYYKKALQ 336 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 R +K++ F VD+I+ PT P +G+E M DV TV N+ G+ Sbjct: 337 ARKEMKKEMIGLF-NSVDLIVGPTVPKLPHKIGEE---LSPMEMYAYDVLTVLTNICGIC 392 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + V +P+GLQ+ G +E + S +IE E Y Sbjct: 393 SGVVGCGNI-NGIPVGLQIQGASLDDEKVLSA--MIEFENNY 431 >gi|218680909|ref|ZP_03528806.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium etli CIAT 894] Length = 150 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 100/150 (66%), Positives = 125/150 (83%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + ++E+R +LR+K+I+A+EL ++YI AI+ +N ++NAYI+V AR A+ SD Sbjct: 1 MSELTSLTIAEARQKLRAKEITALELTEAYISAIDAANGRLNAYIKVTPDLARVMAKNSD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +RI+ G A +LEGIP+GIKD FAT G+HTQACSHILDGF P YESTVTQ LWD+GAVMLG Sbjct: 61 ERIVAGKAGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDS 150 KLNMDEFAMGSSNETSYYGPVI+PWR+ S Sbjct: 121 KLNMDEFAMGSSNETSYYGPVINPWRAAGS 150 >gi|323526361|ref|YP_004228514.1| Amidase [Burkholderia sp. CCGE1001] gi|323383363|gb|ADX55454.1| Amidase [Burkholderia sp. CCGE1001] Length = 469 Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 145/486 (29%), Positives = 240/486 (49%), Gaps = 38/486 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E+ + ++ + +S VEL+D+ + IE+ ++ +NA+I V +AR A E++ R++ G+ Sbjct: 6 IAEASNLIQKRKLSPVELIDACLTRIESVDASLNAFITVTVDRARQEAIEAEHRMMKGEL 65 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L+GIPIG KD TKG+ T A S L G+ P ++ V + L D GA+ LGKL M EF Sbjct: 66 RGRLDGIPIGHKDILFTKGVQTSAHSKHLKGWVPEGDAHVVRSLADAGAISLGKLAMHEF 125 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A+G + + P +PW T +FT GSS G++AAVA L GTDT GSI P Sbjct: 126 ALGGPSFDLPWPPARNPW----DTRRFT-SGSSSGTAAAVAAGLILGGTGTDTAGSIAAP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G VG+KPTYG CS+ GI+ APSLD G + T D A+LL+ +AGYD D V Sbjct: 181 AALCGVVGLKPTYGLCSKRGILPLAPSLDHVGPLCWTAEDCAMLLEEMAGYDREDPASVK 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGAKIVEISLP 305 D + +++G+ +GI ++ ++P + + + IS + GA + ++++P Sbjct: 241 RAPADLALRAEDNVRGIRIGIASDWHETEHPVTPAVKEGLDRAISVWTEQGAHVDQVTMP 300 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + ++I AEA S + E + FG++++ R+++ Sbjct: 301 RLEEYRATCFVILTAEAYS------------------VHEKALRSNPSAFGEQLRLRLLL 342 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G + + + Y+ A + R + A ++ + F + Sbjct: 343 GATLSA-----ADYVNAVRQRRRLCVATAAATADVDVIVTAGAANGAPF-----MTDVPR 392 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 G + F N+ G P+I + MP+ +Q+ +PF E L + EK Sbjct: 393 WGDLEKPGFYEPFNITGWPSIVFCSGFGIDHMPVSVQIAAKPFMEHKLIQLAAAFEKATN 452 Query: 486 Y--FRP 489 + RP Sbjct: 453 FRNIRP 458 >gi|156040710|ref|XP_001587341.1| hypothetical protein SS1G_11333 [Sclerotinia sclerotiorum 1980] gi|154695717|gb|EDN95455.1| hypothetical protein SS1G_11333 [Sclerotinia sclerotiorum 1980 UF-70] Length = 477 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 129/369 (34%), Positives = 197/369 (53%), Gaps = 55/369 (14%) Query: 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV 225 AVA ++GTDTGGS+R PA++TG G KP+YG SR G++ +A SLD G I R+ Sbjct: 2 AVATSTTNIALGTDTGGSVRLPAAYTGIAGFKPSYGIVSRFGVVPYANSLDTVGFIARSA 61 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ-----------------GMTVGI 268 ++ +D D T +L R +Q ++ + +G+ Sbjct: 62 NRIQNFFDRVSNFDHRDPT--SLRSASRARIKEQRMEFIGKTKASATHDPFYLRELKIGV 119 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 P EY + L + WQ+ + L+ G IV ISLP+T++AL AYY+++ AEASSNLA+ Sbjct: 120 PIEYNISELDLEVSWAWQRILELLQRQGCTIVPISLPNTKHALSAYYVLAAAEASSNLAK 179 Query: 329 YDGVRYGLRVEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 YDGVRYG R + D + +Y TR GFG EVK RI++G+Y LSS +D+++++A+K+R Sbjct: 180 YDGVRYGTREKPTDGVGDVLYSETRGAGFGDEVKRRILLGSYSLSSEAFDNYFIKAQKVR 239 Query: 387 TLIKRDFTEAF-----------------EQG-----------VDVILTPTTPTSAFPLGK 418 L++RDF F E+G VD+IL PT PT + + Sbjct: 240 RLVQRDFDRVFSMPNYLQPEEQFDLSDMEEGIPLEDKLGPAEVDIILCPTAPTLSPTVQD 299 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL----CEKKMP--LGLQLIGQPFREET 472 + ND+FTV ++AG+P+IS+P L +K +P +G+Q++GQ + Sbjct: 300 VTERQTPVDAYMNDIFTVPASLAGIPSISIPCKLPFKFSKKSVPSTVGIQIMGQHSDDGR 359 Query: 473 LFSVGQIIE 481 + +IE Sbjct: 360 TLQIASMIE 368 >gi|330888641|gb|EGH21302.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. mori str. 301020] Length = 292 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 131/296 (44%), Positives = 182/296 (61%), Gaps = 5/296 (1%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ M ++E L K S+ EL + I + Q N++I + A A+ +D R Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIATLDPQFNSFISLTEDLAITQAQAADARR 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G P+ KD F T+GI T S +LD F+ Y++TV KL G V LGK N Sbjct: 61 AAGENGPLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MDEFAMGS+NE+S+YG V +PW + PGGSSGGS+AA A L A+ GTDTGGS Sbjct: 121 MDEFAMGSANESSHYGAVKNPWNL-----QCVPGGSSGGSAAAGAARLLPAATGTDTGGS 175 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IRQPA+ T G+KPTYGR SR G+I++A SLDQAG + RT D A+LL+ +AG+D D+ Sbjct: 176 IRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTPEDCALLLQGMAGFDPQDS 235 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 T ++ PVPDY +L+ S++G+ +G+PKEY L P I + + + L+ GA + Sbjct: 236 TSIDEPVPDYSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAVV 291 >gi|158424248|ref|YP_001525540.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331137|dbj|BAF88622.1| amidase [Azorhizobium caulinodans ORS 571] Length = 475 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 149/494 (30%), Positives = 243/494 (49%), Gaps = 35/494 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ M ++E+ + R+ +S V+L ++++ ++ + +N++I + A++AR A++++ Sbjct: 1 MSALHEMTIAEAGRQFRAGTLSPVDLTEAFLARMDALDGALNSFITITAERARTEAKDAE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G D ++G P G+KD + T G+ T A S +L+ P + TV KL G V+L Sbjct: 61 TLFARGVDKGPMQGAPYGLKDIYDTAGVRTTAHSKLLEHHVPTEDCTVQAKLRAGGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EFAMG + + P +PW S P GSS G+ A++A LC A+ G D Sbjct: 121 GKQATWEFAMGGPSFDLPWPPARNPWDLARS-----PLGSSSGAGASIAAGLCPAATGRD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA+ G G+KPTYG SR G+ + S D G + TV D A++L +AG+D Sbjct: 176 TGGSIRMPAAACGIAGLKPTYGLVSRRGVQPNSYSFDHCGPMAWTVEDCALMLGVMAGHD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPTIDKTWQQGISWLKDAGA 297 D + P DY L + G+ +G+ + + D L +P + I+ G Sbjct: 236 PLDPASIAFPAEDYAAWLFTPVAGLRIGVVRHWYEDELEAAPAVVAAMDASIALFHRLGC 295 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 I E+ LP + + ++ E S + EM TR FG+ Sbjct: 296 HISEVRLPSLRTFTDSKMPLTAGEIFS------------------LHEMDLRTRPQDFGR 337 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 +++RI+ G + R D Y++A + R + E + VD++LT T+ A L Sbjct: 338 SMRYRILPGALL---RAED--YVQAMRARAELTAQVFEVMRE-VDILLTATSAQPAPLLL 391 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E + + + T N+ G PA+S+ +PLGLQL G+P + + +G Sbjct: 392 PDEPPTFFGAKVPS--LTAQFNLTGQPALSLCNGFDVAGLPLGLQLAGRPGEDALVLRLG 449 Query: 478 QIIEKEAGYFRPHK 491 E+E FR H+ Sbjct: 450 AAFERETD-FRRHR 462 >gi|108804703|ref|YP_644640.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rubrobacter xylanophilus DSM 9941] gi|108765946|gb|ABG04828.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rubrobacter xylanophilus DSM 9941] Length = 463 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 168/501 (33%), Positives = 250/501 (49%), Gaps = 51/501 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ +V E+ + S ++S VEL S ++ IE + ++ AY+ + ++A A A+ + Sbjct: 1 MTSPATFSVVEAARLIASGELSPVELTRSILERIERIDPRLKAYVAIFHEEALAEAKRAA 60 Query: 61 KRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I + G L GIP+ IKD + +G T A S + G +S V ++L + GA+++ Sbjct: 61 NEISMLGPRSSLHGIPVAIKDVYDIEGKPTLAGSRVRVGHIADADSEVVKRLREAGAIIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EFA G ++ P +PW PGGSSGGS AA+A LC A+ GTD Sbjct: 121 GKTVTHEFASGVTSP-----PTRNPWDL-----NRIPGGSSGGSGAALAADLCLAATGTD 170 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PAS G VG+KPT+GR S+ GI+ + SLD G + +TV D+A++L +AGYD Sbjct: 171 TAGSIRIPASVNGVVGLKPTFGRISKRGIVPLSWSLDHVGPLAKTVHDAALMLNTLAGYD 230 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + PV D+ +D I G VG+ + + LD + + K Q+ +D GA + Sbjct: 231 PADVCSIKEPVRDFTDRIDCEISGFKVGVAQNWYLDRIGAAVAKATQEAARTFEDLGASV 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARY-----DGVRYGLRVEGKDILEMYENTRSIG 354 EI + H A+ + I AEAS+ + R G RV + Sbjct: 291 EEIEIQHLDLAMEIHSTILSAEASAYHQSMLPVASESYRRGTRV-------------FLQ 337 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 GQ + + YL A++ R LI++ F EAF + VDV++ PT PT A Sbjct: 338 AGQLIP---------------ATAYLNAQRARELIRQGFREAFSR-VDVLIGPTLPTVAA 381 Query: 415 PLGKEENNSGSMGHIYNDVFT---VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 G + +T + N+AGLPA+SVP +PLGLQLIG+P E Sbjct: 382 LFGSNKVEVNGTEEDITQAYTRLSIPANLAGLPALSVPCGY-HLGLPLGLQLIGKPLDER 440 Query: 472 TLFSVGQIIEKEAGYF--RPH 490 T+ G E+ + RP+ Sbjct: 441 TVLRAGHAYEQATNHHLKRPN 461 >gi|19112153|ref|NP_595361.1| mitochondrial glutamyl-tRNA amidotransferase alpha subunit (predicted) [Schizosaccharomyces pombe 972h-] gi|6225432|sp|O94509|GATH_SCHPO RecName: Full=Probable glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Short=Glu-ADT subunit A; Flags: Precursor gi|4160339|emb|CAA22807.1| mitochondrial glutamyl-tRNA amidotransferase alpha subunit (predicted) [Schizosaccharomyces pombe] Length = 471 Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 138/415 (33%), Positives = 226/415 (54%), Gaps = 21/415 (5%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +K+ TK T A S++L + +++++ + L G ++LGK NMDEFAMG +E Sbjct: 61 ITVKENICTKTNLTTAASNMLKDYNSPFDASIVESLKKAGGIILGKTNMDEFAMGVKSEN 120 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + +G ++P + + GGSSGG++AA+A +C AS+G+DTGGSIR PA++ G VG Sbjct: 121 NLFGRTVNP---VVKDSNYDVGGSSGGAAAAIAADICYASVGSDTGGSIRLPAAYVGCVG 177 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY-- 253 KP++GR SR G+++FA S D GI V+ + + D D+TC+ + Sbjct: 178 FKPSFGRISRYGMLAFANSFDTVGIAANNVKGVTKVFNVLDHPDINDSTCLTKEARYFVK 237 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 E+ S + + +GIP ++ + P + W + IS LK G + EI LP + YA Sbjct: 238 EQHKKLSRKPIKIGIPIDWNVSETHPNVLDKWNEFISLLKSNGYLVQEIQLPISLYANSV 297 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-RSIGFGQEVKHRIMIGTYVLSS 372 Y ++ AEA+SNLA+Y+ + +G ++ K E+ +T RS G EVK R+++G Y L+ Sbjct: 298 YSTMAYAEATSNLAKYNTIAFGNCLDEKFEEEIISSTARSFFLGDEVKKRLLLGAYSLAR 357 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAF----------EQGVDVILTPTTPTSAFPLGKEENN 422 + +AR +R I+ +F + F +D I+TP+ S+ P+ Sbjct: 358 MNSSDLFSKARYVRRAIQLEFNKNFFLPSFSVDDPRGDIDFIVTPSFFNSSQPI----ET 413 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 S H+ +D V NMAG+P++S+P +P+G+Q++ Q +E L S Sbjct: 414 PSSYSHL-SDTMLVPANMAGIPSVSIPFGTLNNGLPMGIQIMAQYLNDEDLLSFA 467 >gi|47569571|ref|ZP_00240249.1| glutamyl-tRNA(gln) amidotransferase, A subunit [Bacillus cereus G9241] gi|47553754|gb|EAL12127.1| glutamyl-tRNA(gln) amidotransferase, A subunit [Bacillus cereus G9241] Length = 301 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/265 (47%), Positives = 173/265 (65%), Gaps = 5/265 (1%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +VSE +L +K+IS +LV+ + I + + A++ + + ARA A+E D +I D Sbjct: 7 SVSELHKKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAED 66 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PIG+KD T G+ T S +L F P Y++TV QKL + +GKLNMDEF Sbjct: 67 NGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIYDATVVQKLKAADTITIGKLNMDEF 126 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMGSSNE S + +PW ++D + PGGSSGGS+AAVA S+G+DTGGSIRQP Sbjct: 127 AMGSSNENSGFYATKNPW-NLD----YVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D DAT N Sbjct: 182 AAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISGLDRMDATSAN 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEY 272 + V +Y L ++G+ + +PKEY Sbjct: 242 VEVGNYLAGLTGDVKGLRIAVPKEY 266 >gi|170750816|ref|YP_001757076.1| amidase [Methylobacterium radiotolerans JCM 2831] gi|170657338|gb|ACB26393.1| Amidase [Methylobacterium radiotolerans JCM 2831] Length = 470 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 157/491 (31%), Positives = 248/491 (50%), Gaps = 48/491 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + ++++S+ ELV + + I + +N+++ + AA + G Sbjct: 14 ITELARMIAAREVSSAELVGASLDRIARLDGALNSFVHLSPAALDAARAADAEIARTGPR 73 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ IKD + T + T+A + + P +S +L GAV+LGK M EFA Sbjct: 74 GPLHGIPLAIKDNYGTADMPTRAGTAVEALTFPAADSHAVARLRAAGAVILGKTRMHEFA 133 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G P +PW D+ PGGSSGGS AAVA LC A++G+DTGGSIR PA Sbjct: 134 WGMVTP-----PTRNPW----DPDR-VPGGSSGGSGAAVAARLCPAALGSDTGGSIRIPA 183 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG+KPTYGR R GI+ + SLD AG +T TV DSA++L+A+AG D D Sbjct: 184 ALCGVVGLKPTYGRVGRSGIVPHSWSLDHAGPLTLTVADSALMLQALAGPDAGDPAASAA 243 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPDY LD+ I+G+ V + + + D + + + + +L+D G + ++++P + Sbjct: 244 PVPDYTAGLDRPIRGLRVAVIRNHFFDAIGDDVAAAIEAALRFLEDRGCAVRDVAVPSLR 303 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 + L A Y I E +S+ A + G+ + + + GF +V+ + +G Sbjct: 304 HGLGAIYAI---ELASSTAYH----------GRSLAQGHVA----GFAADVRDLVEMGRL 346 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 V YLRA + R LI + + DVI+ P +P +A+ + + ++ S+G Sbjct: 347 VTG-----PDYLRAEQARALIMAEMAGVLAEA-DVIVGPASPLTAW---RTDESAVSLGG 397 Query: 429 IYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 V T N+AGLPAI++P + +P+ LQ+ +PF E + V Sbjct: 398 RAESVLAASWRLTYPFNLAGLPAIALPCGFDRRGLPISLQIAARPFAEAEILRVAH---- 453 Query: 483 EAGYFRPHKWW 493 Y R H WW Sbjct: 454 --QYERAHDWW 462 >gi|321262799|ref|XP_003196118.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Cryptococcus gattii WM276] gi|317462593|gb|ADV24331.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Cryptococcus gattii WM276] Length = 494 Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 157/448 (35%), Positives = 231/448 (51%), Gaps = 40/448 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ I +K+ + T S IL ++P +++T L GA ++G MDEF MG Sbjct: 44 LSGMTIALKENISYSYAPTTCSSTILKDYKPPFDATCVSSLIAAGAQIVGMTKMDEFGMG 103 Query: 131 S--SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 S ++ YY PV +P + GGSSGGS+AAVA C A++GTDTGGS+R PA Sbjct: 104 SLTTHLPPYYSPVYNPASPSPEEPHRSAGGSSGGSAAAVAEGSCDAALGTDTGGSVRLPA 163 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN- 247 S+ G VG+KP+YG SR G++++ SLD G++ R V + ++ D+ D TC + Sbjct: 164 SYCGVVGLKPSYGLISRRGVVAYGDSLDCVGVLAREVDTVERVFNVLSHPDDNDMTCASA 223 Query: 248 ------LPVPDYERALDQSIQG----MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 L + A+ + G +G+P + L P T + +S L+ GA Sbjct: 224 GPRSQALSILKAHLAILPTTAGPLSDCRIGVPSQAS---LPPPYINTPRSLLSHLQSLGA 280 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY--------GLRVEGKDILEMYEN 349 + +SLP ALPAYY+++ AEASSNL RY G + G R E I + Sbjct: 281 TLHPVSLPSLPKALPAYYVLASAEASSNLGRYGGSWFAGQNEKALGKRPEENGI-QRRIR 339 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE----------- 398 RS GFG EVK RI+ GT+ LS+ +++ YL+A IR +K+D+ F Sbjct: 340 VRSEGFGMEVKKRILAGTHALSADEFNNTYLKALYIRRCLKKDYQAIFRIPYPLSSSSAV 399 Query: 399 ---QGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCE 454 GVD I+ PT +A +SG Y D+ V ++AGLP++SVPA Sbjct: 400 LSPDGVDFIIHPTAICTAPTTNPTGKDSGQKEATYIQDLLNVPASLAGLPSMSVPAGRGP 459 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEK 482 P+G+ + GQ E+ +F +G+ IEK Sbjct: 460 DGWPIGVAITGQWGMEDLVFRLGRTIEK 487 >gi|293363358|ref|ZP_06610180.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma alligatoris A21JP2] gi|292553027|gb|EFF41778.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma alligatoris A21JP2] Length = 443 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 139/413 (33%), Positives = 212/413 (51%), Gaps = 29/413 (7%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD FAT TQA S IL+ F P Y +TV QKL D GA + K++ DE A+G + S Sbjct: 51 IKDVFATNFAKTQASSKILENFEPKYNATVVQKLLDAGAFAIAKVHNDELALGGTGTFSA 110 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG + + +DS K GGSS GS ++ + A +G+DTG S+R PASF G VG K Sbjct: 111 YGLITN---RLDS--KRYAGGSSSGSIVTLSDNISFA-LGSDTGDSVRLPASFNGKVGFK 164 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG SR G+ ++A SLD V D A++ K++ G D+ D T + + + + + Sbjct: 165 PSYGAISRYGMFAYASSLDTVSYFAHNVNDIALISKSVYGIDKKDMTSIEVKIDNVTKLK 224 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL-----P 312 + + + K Y DY+ Q IS L+ + +E+++ L P Sbjct: 225 PKKVIAFNL---KNYLEDYVQ-------QAYISVLEKLKKQNIEVTILEPNVELLRAIKP 274 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y I+S +EASSNLA G+ +G R +G + E+ NTRS FG V+ R+ +G+Y L S Sbjct: 275 VYDIVSYSEASSNLANLAGIGFGAREKGNNWEEIMTNTRSKNFGMMVQRRLSLGSYYLYS 334 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 +L+A+K+R LI ++ ++ D++L P A PL S + H + D Sbjct: 335 ENQKDVFLKAQKVRRLI-SEYYKSLHSQADLVLYPAAANIA-PLF-----SDNTKHDFMD 387 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ G P++++P E MP + L + +E L S +E+ G Sbjct: 388 YILTGANLNGNPSLTIPMGKKE-NMPFSITLDSALYNDEKLLSYSLYLEEILG 439 >gi|291533229|emb|CBL06342.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Megamonas hypermegale ART12/1] Length = 208 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 105/202 (51%), Positives = 136/202 (67%), Gaps = 3/202 (1%) Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 I LK GA+IV+ISLPHT YA+ YY+I+PAEAS+NL+RYDGV YG RV+G+DI+ Sbjct: 1 MNTAIEDLKKLGAEIVDISLPHTDYAISTYYLIAPAEASTNLSRYDGVSYGSRVDGEDIV 60 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 M NTR+ FG EVK RIMIG Y LS+ YD++YL+A K+RTL+K+DF AF+ VDVI Sbjct: 61 SMMTNTRTAKFGPEVKRRIMIGNYALSAGYYDAYYLKALKVRTLVKQDFDNAFKD-VDVI 119 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L P PT A+ LG N+ M + D+FTV +N+AGLP IS+P + MP+G+Q I Sbjct: 120 LAPVAPTPAYKLGSMANDPLKMYLM--DIFTVPLNLAGLPGISIPCGRSKDNMPIGMQFI 177 Query: 465 GQPFREETLFSVGQIIEKEAGY 486 G+P EET+ E Y Sbjct: 178 GRPLDEETIIRAAYTYEVNHDY 199 >gi|83716519|ref|YP_438918.1| glutamyl-tRNA [Burkholderia thailandensis E264] gi|83650344|gb|ABC34408.1| glutamyl-tRNA, putative [Burkholderia thailandensis E264] Length = 534 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 148/492 (30%), Positives = 236/492 (47%), Gaps = 41/492 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++++ + +LR + +S VEL + + I + +NAYI + A+ A A A +++ I Sbjct: 76 FEYLSLLDVSSQLRQRRLSPVELTQAILARIARLDPHLNAYIRITAESALADARRAEQEI 135 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L G+P+ +KD F KGI T A I ++TV ++L GAVMLGKL Sbjct: 136 ARGTDRGPLHGVPVAVKDIFDIKGIPTTAGMGIRANAVADEDATVVRRLRSAGAVMLGKL 195 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +M E A + + T + P +PW D + PG SS GS+ A+ LC A++ ++TGG Sbjct: 196 SMTEGAY-AEHRTPFAAPR-NPWH-----DAYWPGASSSGSAVAICAGLCYAALASETGG 248 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ G GIKPT+GR SR A +LD G+I R+ D+ +L+AIAG D D Sbjct: 249 SIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVIARSAADATAVLEAIAGADPAD 308 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T LPVPD+ AL + ++G+ +G+ + L ++ I+ L++ GA+IV + Sbjct: 309 PTTSRLPVPDFPSALTRELKGVRLGVDDSWLGARLGDAAERAISTAIAVLRELGAEIVAV 368 Query: 303 SLPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +LP + ++ + + A ++ A Y + G + + E R++ G E++ Sbjct: 369 TLPDVSDMIWDWFPVCAVQTALAHEATYPSRKNEY---GASLAALIEQGRALS-GTELQ- 423 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRD-FTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R L++R F DV+ P A + E Sbjct: 424 ------------------------RLLLRRQVFRGKLAAVFDVVDIVALPVLADGVPTIE 459 Query: 421 NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S + D+ FT NMAG+P+I +P + +PL Q+IG F E L V Sbjct: 460 RMSKVDDDLIADLHRFTCPFNMAGIPSIVLPCGMSANGLPLVFQMIGTHFSEALLACVAD 519 Query: 479 IIEKEAGYFRPH 490 + + H Sbjct: 520 AYQASTEWHLRH 531 >gi|284931641|gb|ADC31579.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma gallisepticum str. F] Length = 482 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 150/473 (31%), Positives = 234/473 (49%), Gaps = 15/473 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +LR K+I+ +LV ++ I N NAY+ V Q+ D ++N L I Sbjct: 11 QLRKKEITPDQLVKDSLKLI-NKYHWTNAYLYVNEQRVNEKVNNFDHNLVNNSL--LAYI 67 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD +TKGI T S L+ + P Y++TV + L + A+M+ K+NMDEF +G + Sbjct: 68 PYSLKDNISTKGITTTGGSRFLEHYIPPYDATVYKILENLNALMVAKVNMDEFGLGGTGL 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G P + K+ PGGSS GS+ +VA S+ TDTG S+R+PAS G V Sbjct: 128 YSGFGYTHHPI-----SKKYAPGGSSSGSAISVANNSVVFSVATDTGDSVRRPASLVGIV 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KPTYG SR G+ +APS+D I TR V D AI+ A++ +D D T Sbjct: 183 GFKPTYGSISRYGVYPYAPSMDHVAIFTRNVTDVAIVTDALSQFDPKDFTSQKRSKSLLN 242 Query: 255 RALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWL-KDAGAKIVEIS--LPHTQYA 310 L+ + + + L+ Y+ I W++ I +L K +IVE+ + + Sbjct: 243 HLLEPDLNQKKIRLGYYKNLEPYMYEDILTAWKKVIDFLYKTNKFEIVELEFDIELLKAV 302 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 LP Y I+S EA+S A G+ +G +VEG+ + N R+ G ++K R IG Y+ Sbjct: 303 LPTYQILSFPEANSCYANLTGIPFGEKVEGESYEQKVINARTKLLGNQIKRRFTIGAYIT 362 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + Y+ + +A+K R +I F ++ ++ VDV+ S F E+ G Sbjct: 363 LAENYEPLFKKAQKARRMIVDHFEQS-KKDVDVVF--GLGASNFAAAIEDYKQGLADTNL 419 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D F N G P+I++P + +GL L+ F ++ + +IE E Sbjct: 420 IDDFLSIANFGGHPSITIPMIKNRDNLTVGLNLVSNQFNDDLIIKTAYLIETE 472 >gi|291320718|ref|YP_003515983.1| glutamyl tRNA(glN) amidotransferase subunit A [Mycoplasma agalactiae] gi|290753054|emb|CBH41030.1| Glutamyl tRNA(GLN) amidotransferase subunit A [Mycoplasma agalactiae] Length = 437 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 143/424 (33%), Positives = 224/424 (52%), Gaps = 23/424 (5%) Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 D++I GD L IKD +AT+ T A S IL+ F PHY +TV QKL D GAV + Sbjct: 29 DEKIRVGDGI-LNECVFTIKDNYATESKKTTASSKILENFMPHYNATVVQKLLDAGAVPV 87 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K++ DE A+G + + S +G + +P+ D G S SAA A S+G+D Sbjct: 88 AKVHCDELALGGTGKHSAFGLITNPF------DSSRLAGGSSSGSAATLTKNVAFSLGSD 141 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TG S+R PAS+ G VG KP+YG SR G+ +FA SLD V D A L + G D Sbjct: 142 TGDSVRLPASYNGLVGFKPSYGAISRFGLFAFASSLDTVAYFAHNVSDIATLSQVAFGKD 201 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAK 298 D T +++ + D +A Q I + V +E+ +DK +++ IS L + + Sbjct: 202 PRDMTSLSIKINDVMKAKPQKIGILNVHGLEEF--------VDKKYKELISELSNVTNVE 253 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +V+I+ + P Y IIS +EASSNLA +G+ +G R +G + E+ NTR+ GFG+ Sbjct: 254 LVDINETLFKAIKPVYEIISYSEASSNLANLNGIAFGSRKDGSNWEEIMTNTRAEGFGEM 313 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V+ R+ +G++ L S+ + L+A+K+R LIK ++ + D+++ P A + Sbjct: 314 VQLRLALGSFFLHSKNQEEMILKAQKVRRLIKEHL-DSIHKRFDIVIYPCAADYAPYIDD 372 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +N H Y D N+AG P++S+P + + + L + + + +E L S Sbjct: 373 SKNKL----HGYMDYILTGANLAGNPSLSIP--WIKDNLFVNLSIDSKIYEDEKLLSHAL 426 Query: 479 IIEK 482 IE+ Sbjct: 427 WIEE 430 >gi|31544811|ref|NP_853389.1| glutamyl-tRNA(gln) amidotransferase subunit A [Mycoplasma gallisepticum str. R(low)] gi|31541657|gb|AAP56957.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma gallisepticum str. R(low)] gi|284930885|gb|ADC30824.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma gallisepticum str. R(high)] Length = 482 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 151/474 (31%), Positives = 235/474 (49%), Gaps = 17/474 (3%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +LR K+I+ +LV ++ I N NAY+ V Q+ D ++N L I Sbjct: 11 QLRKKEITPDQLVKDSLKLI-NKYHWTNAYLYVNEQRVNEKVNNFDHNLVNNSL--LAYI 67 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD +TKGI T S L+ + P Y++TV + L + A+M+ K+NMDEF +G + Sbjct: 68 PYSLKDNISTKGITTTGGSRFLEHYIPPYDATVYKILENLNALMVAKVNMDEFGLGGTGL 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G P + K+ PGGSS GS+ +VA S+ TDTG S+R+PAS G V Sbjct: 128 YSGFGYTHHPI-----SKKYAPGGSSSGSAISVANNSVVFSVATDTGDSVRRPASLVGIV 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KPTYG SR G+ +APS+D I TR V D AI+ A++ +D D T Sbjct: 183 GFKPTYGSISRYGVYPYAPSMDHVAIFTRNVTDVAIVTDALSQFDPKDFTSQKRSKSLLN 242 Query: 255 RAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEIS--LPHTQY 309 L D + + + +G K L Y+ I W++ I +L K +IVE+ + + Sbjct: 243 HLLEPDLNQKKIRLGYYKNLEL-YMYEDILTAWKKVIDFLYKTNKFEIVELEFDIELLKA 301 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP Y I+S EA+S A G+ +G +VEG+ + N R+ G ++K R IG Y+ Sbjct: 302 VLPTYQILSFPEANSCYANLTGIPFGEKVEGESYEQKVINARTKLLGNQIKRRFTIGAYI 361 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + Y+ + +A+K R +I F ++ ++ VDV+ A + + I Sbjct: 362 TLAENYEPLFKKAQKARRMIVDHFEQS-KKDVDVVFGLGASNFAAAIEDYKQRLADTNLI 420 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D F N G P+I++P + +GL L+ F ++ + +IE E Sbjct: 421 --DDFLSIANFGGHPSITIPMIKNRDNLTVGLNLVSNQFNDDLIIKTAYLIETE 472 >gi|25026579|ref|NP_736633.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium efficiens YS-314] gi|259508286|ref|ZP_05751186.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium efficiens YS-314] gi|23491858|dbj|BAC16833.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Corynebacterium efficiens YS-314] gi|259164104|gb|EEW48658.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Corynebacterium efficiens YS-314] Length = 474 Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 167/483 (34%), Positives = 253/483 (52%), Gaps = 34/483 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +E + +++S VEL + + N NAYI + A A A+ +++ Sbjct: 4 ELLNKTATEVGKLIEGREVSPVELTQALLDHAHEVNETTNAYISFRDEAALAEAKAAEEE 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ R L GIP+ IKD G T S I F +++V +KL + G V+ GK Sbjct: 64 IAGGNYRGPLHGIPMAIKDNIYVGGEVTTMASKIHGEFVSQDDASVVKKLREAGVVLTGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNM E+A G N + ++G V +PW +TDK PGGSSGGS AAVA ++GTDT Sbjct: 124 LNMHEYAWGIDNNSPHFGSVQNPW----NTDK-VPGGSSGGSGAAVASDASFTTLGTDTA 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++ G VG+KPT+GR ++ G A SLD G ++++V D+A L+AIAG+D Sbjct: 179 GSIRIPSAACGLVGLKPTHGRVAKYGCFPLAWSLDHIGPMSKSVADAAATLRAIAGFDHR 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T V++PVPDY L + + +G+ ++Y + I++ ++ I L GA + Sbjct: 239 DPTAVDVPVPDYSADLGGDARDLVIGVEEDYFFRDVDSPIEQAVRKQIEDLVSQGATLKT 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +S+P + S +EAS+ + +D+ TR FG +++ Sbjct: 299 VSIPSLAISEWTELATSLSEASA-------------IHHRDL-----QTRPDDFGADIRF 340 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--E 419 +G YL+A++ R IK++FT A VDVI+ PT P A +G Sbjct: 341 LFELGELFSG-----VDYLQAQQARRQIKQEFTAALRD-VDVIIAPTLPVMAPDIGSPTA 394 Query: 420 ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N + I N + FT N+ GLPA++VP L + +P+GLQ+IG+ F E + VG Sbjct: 395 KLNGQDVDLIDNFIRFTGPSNLTGLPAMTVPVGLTD-GLPIGLQIIGRAFDEARVLKVGS 453 Query: 479 IIE 481 IIE Sbjct: 454 IIE 456 >gi|91781254|ref|YP_556461.1| amidase [Burkholderia xenovorans LB400] gi|91693914|gb|ABE37111.1| Amidase [Burkholderia xenovorans LB400] Length = 466 Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 152/493 (30%), Positives = 233/493 (47%), Gaps = 39/493 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+++ ++ +R+R+K +S++E+ + + I N + AY+ V A A A +D+ Sbjct: 5 DLHYLPLTVLAERIRTKTVSSLEVTQTQLDRIARLNPGLRAYVTVTADVALEQARAADEA 64 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + GD + L GIPIG+KD T+GI TQ S + P ++TV +KL + GAV+LGK Sbjct: 65 LARGDYKGPLHGIPIGVKDLAWTRGIPTQFGSVVYRDHIPTEDATVVRKLREAGAVLLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L + E A S + PV +PWR PG SS GS A A L ++GTDTG Sbjct: 125 LQLTEGAY-SEHHPEIPAPV-NPWRK-----DLWPGVSSSGSGVATAAGLAYGTLGTDTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA G G+KPT+GR SR G A +LD G I RTV D A +L IAG D+ Sbjct: 178 GSIRFPAGANGVTGLKPTWGRVSRYGAFELAATLDHIGPIARTVDDVAAILGVIAGVDDL 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T + PVPDY +D+ I+G+ +GI K + P I L+ AGA +V+ Sbjct: 238 DPTAADRPVPDYLTGIDKGIRGVRIGIDKAWNEQGTDPQAATAVSDAIEVLRRAGAAVVD 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P + + + GV+ + E E++ +R +G + + Sbjct: 298 VKFPDA------------VQNNLDWIPLAGVQTAVAHE-----EIFA-SRKAEYGPVLAN 339 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT----TPTSAFPLG 417 I G LS Y LR R + R F + +D+++ P+ PT A L Sbjct: 340 LIRTGQ-ALSGTDYQKIILRREDFRGRVDRLFRD-----IDLLIVPSYGVAAPTYAT-LS 392 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + + +T + G P +S+ + P+G QL+ + E L G Sbjct: 393 RFIEEPTLAERLTR--YTFPFDATGQPTLSLNGGFTDDGAPVGFQLVAAAWNEPLLLRAG 450 Query: 478 QIIEKEAGYFRPH 490 ++E + H Sbjct: 451 HTFQQETDWHLRH 463 >gi|311105678|ref|YP_003978531.1| amidase [Achromobacter xylosoxidans A8] gi|310760367|gb|ADP15816.1| amidase family protein 6 [Achromobacter xylosoxidans A8] Length = 475 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 147/472 (31%), Positives = 223/472 (47%), Gaps = 39/472 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +RS ++S VE+ + ++ IE + ++ +Y V A A A+ ++ I G R L G+ Sbjct: 25 IRSGEVSPVEITLAQLRRIEALDGELRSYACVTAASALQEAQVAETEIRQGHYRGPLHGV 84 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD F KG+ T A + I +++TV ++L D GAV+LG+L M E A Sbjct: 85 PVGLKDLFRRKGVPTAAGTAIHRDTPADHDATVVRRLRDAGAVLLGQLQMTEGAY----- 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + P ++P R+ + D +T G SS GS+ A A LC + +DTGGSIR P + TG Sbjct: 140 -SDHHPSVAPPRNPWNADYWT-GISSSGSAVATAAGLCFGATASDTGGSIRWPCAATGLT 197 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPT+GR SR G+ A SLD AG+I R+ +D+A+LL+AIAG D D T + PVP Y Sbjct: 198 GIKPTWGRVSRHGVFELAASLDHAGVIARSAQDAAVLLEAIAGPDPADPTALQAPVPRYA 257 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + I G+ +G+ ++ + P + + GA +V + P A Sbjct: 258 QEAEAPIDGLRIGVDPDWNASEVDPQTQRMMTAAMQVFDQLGATLVPLRFPSDDAA---- 313 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 A D Y +R +G + I G + L Sbjct: 314 -----------QAVRDWAPLCAVEAALAHAATYP-SRKAEYGSVLAGVIEAG-HALPGLA 360 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV- 433 Y LR +R + F + VD +LTP P L N +G V Sbjct: 361 YQRILLRRMAMRGQVDALFAK-----VDALLTPVQPMPPLTL----NAVSVLGQQPALVE 411 Query: 434 ----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +T +M G P +++PA C+ MP+GLQL+ E LF +G + Sbjct: 412 ALQRYTCVFDMTGHPCLTLPAGQCQAGMPMGLQLVAAHLGEPVLFRLGAAFQ 463 >gi|27383028|ref|NP_774557.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA 110] gi|27356201|dbj|BAC53182.1| bll7917 [Bradyrhizobium japonicum USDA 110] Length = 471 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 159/491 (32%), Positives = 245/491 (49%), Gaps = 37/491 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E M ++E + K +S+ E+ + + I +NA++ + A+ A AAE +D Sbjct: 3 TEPALMTLTEVARAIAMKQVSSHEVTRALLHRIAQWQPHLNAFMSIEAEAALKAAEAADA 62 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+ R L G+P+ KD + G + S I F ST Q+L D G V LG Sbjct: 63 ELAKGEVRGPLHGVPLAHKDMYYDAGKVSTCGSLIRRDFVATTTSTALQRLKDAGQVRLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 L++ EFA G + ++YGPV +PW T SS GS +AVA L A++G+DT Sbjct: 123 TLHLAEFAYGPTGHNAHYGPVRNPWNVAHITGG-----SSSGSGSAVAARLTFAALGSDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA F G G+K T+ R SR G + + SLD G + RT D A+LL +AG D Sbjct: 178 GGSIRMPAHFCGVTGLKTTWSRVSRAGAMPLSQSLDTVGPLARTAEDCALLLALMAGPDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+T + P+ DY A S++G+ +G+P + +D L + + + I+ LK GA IV Sbjct: 238 EDSTASHEPLSDYVGATKGSLKGLKIGVPASFYVDDLDSEVARVLDETIAVLKREGADIV 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++ LP + A ++ AEA++ R+ M E R +G +V Sbjct: 298 KVELPDQRQLSSASQLVLAAEAAAFHKRW----------------MIE--RPQDYGPQVL 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+ G V + YL A + R A GVD I+ P +P A P +E Sbjct: 340 MRLQNGLAVPAIT-----YLEAMRWRG-PALAAHNAATAGVDAIIAPASPVPA-PTIEES 392 Query: 421 N-----NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + N+ +M +FT VN GLP+++VP+ + +P+G+QLIG+ F E TL + Sbjct: 393 DVGGGPNAPAMVQRLT-LFTRPVNFLGLPSLTVPSGFTKSGLPVGMQLIGRSFDEATLLT 451 Query: 476 VGQIIEKEAGY 486 +G ++ Y Sbjct: 452 IGAAFQRVTDY 462 >gi|58265826|ref|XP_570069.1| hypothetical protein CND04950 [Cryptococcus neoformans var. neoformans JEC21] gi|134110530|ref|XP_776092.1| hypothetical protein CNBD1400 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258760|gb|EAL21445.1| hypothetical protein CNBD1400 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226302|gb|AAW42762.1| hypothetical protein CND04950 [Cryptococcus neoformans var. neoformans JEC21] Length = 493 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 155/448 (34%), Positives = 233/448 (52%), Gaps = 40/448 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ I +K+ + T S L ++P +++T L GA ++G MDEF MG Sbjct: 43 LSGMTIALKENISYSYAPTTCSSVALKDYKPPFDATCVSSLVAAGAQIVGMTKMDEFGMG 102 Query: 131 S--SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 S +N YY PV +P + GGSSGGS+AAVA C A++GTDTGGS+R PA Sbjct: 103 SLTTNLPPYYSPVYNPASPSPEEPPRSAGGSSGGSAAAVAEGSCYAALGTDTGGSVRLPA 162 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN- 247 S+ G VG++P+YG SR G++++ SLD G++ R V + I+ D+ D TC + Sbjct: 163 SYCGVVGLRPSYGLISRRGVVAYGDSLDCVGVLAREVDAVERVFNVISHPDDNDMTCAST 222 Query: 248 ------LPVPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 L + A+ + + G +G+P++ L P T + +S L+ GA Sbjct: 223 RSRSQALSILKAHLAILPTTAGPLSGCRIGVPRQAS---LPPPYINTPRSLLSHLQSLGA 279 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT------- 350 + +SLP LPAYY+++ AEASSNL RY G + + E K + + E + Sbjct: 280 TLHPVSLPSLPKTLPAYYVLASAEASSNLGRYGGSWFAGQAE-KTVGKRTEESGIQRRIR 338 Query: 351 -RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE----------- 398 RS GFG EVK RI+ GT+VLS+ +++ YL+A IR +K+DF F Sbjct: 339 IRSEGFGIEVKKRILAGTHVLSADEFNNTYLKALYIRRCLKKDFQAIFRIPHPLSPSPAL 398 Query: 399 ---QGVDVILTPTTPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCE 454 VD I+ PT +A + +S Y D+ V ++AGLPA+SVPA Sbjct: 399 PSPDAVDFIIHPTAICTAPKINPTGEDSDQTEATYIQDLLNVPASLAGLPAMSVPAGKGP 458 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEK 482 P+G+ + GQ E +F +G++IE+ Sbjct: 459 DGWPIGVAITGQWGMENLVFKLGKVIEE 486 >gi|22779355|dbj|BAC15598.1| carbaryl hydrolase [Arthrobacter sp. RC100] Length = 506 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 166/504 (32%), Positives = 259/504 (51%), Gaps = 66/504 (13%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIE--NSNSQMNAYI-----EVVAQKARAAAEESDKRI 63 E +R D+S+ EL Y++ IE +S +N+++ EV+A+ AR ++ I Sbjct: 32 EQARAIRDGDLSSRELTRMYLERIEALDSAETLNSFLLSRGDEVLAEAARLDDLQASGEI 91 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + L GIP+GIKD T G T S +L F P ++T + L GA++LGK N Sbjct: 92 VG----PLHGIPLGIKDALFTAGTRTTGGSAVLKDFVPTKDATAVRLLKSAGALVLGKTN 147 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + E G ++ ++GPV +P+ + PGGSSGGS+AAV+ LC+A+IGTDTGGS Sbjct: 148 LHECGFGITSNNPHFGPVRNPYDP-----QRIPGGSSGGSAAAVSAQLCSAAIGTDTGGS 202 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG------ 237 +R PA+ G VG+KPT GR SR G++ + S D G ITRTV D+A LL+ +A Sbjct: 203 VRIPAALCGVVGLKPTLGRASRGGMLGLSWSYDVLGPITRTVADAAALLRVVASGPDPMD 262 Query: 238 -YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 + D + +LP E L S++G+ +GIP Y + +P +D+ + L+ AG Sbjct: 263 PFAAADPSGASLPEAIAETGL--SLKGVRIGIPDGYFAEDNTPDVDRVLAENYRLLESAG 320 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-- 354 A +V +++ + A + + V + I+ M E R G Sbjct: 321 AILVPVTVKDVEQATHTGF--------------------MTVIPETIVLMEEALREAGIE 360 Query: 355 ---------FGQEVKHRIMIGTYVLSSRCYDSHYLRARKI-RTL--IKRDFTEAFEQGVD 402 FG +V R ++G+ V + A + RT+ I+R F+EA VD Sbjct: 361 GGIAGNLQAFGADV--RAVLGSQVGPEAQPVPAFAYAEAMSRTVPAIRRGFSEALAN-VD 417 Query: 403 VILTPTTPTSAFPLGKE---ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMP 458 V+LT TTP +A P+ ++ ++N S+ + +T +++AGLPAISVP E +P Sbjct: 418 VLLTATTPATAVPIAEDVTMQHNGRSLDTFETLIPYTFCISVAGLPAISVPGGTAENGLP 477 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 +GLQ +G P+ E L + E+ Sbjct: 478 VGLQFVGAPWSEARLLEIALAYER 501 >gi|116234993|dbj|BAF34933.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenobacter thermophilus] Length = 198 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 107/187 (57%), Positives = 137/187 (73%), Gaps = 5/187 (2%) Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIG 354 G I E+SLPH +YA+PAYY+I+P+EASSNLARYDGVRYG R + D+ EMY TR G Sbjct: 4 GCVIEEVSLPHIKYAIPAYYVIAPSEASSNLARYDGVRYGYRAKAYSDLFEMYAKTRDEG 63 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 FGQEVK RIMIGT+ LSS YD++YL+A K+R LIKRDF +AF++ VD++ PTTPT AF Sbjct: 64 FGQEVKRRIMIGTFALSSGYYDAYYLKAMKVRALIKRDFEKAFKK-VDMLACPTTPTVAF 122 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 LG++ + M +D+FTV+VN+AGLPAIS+P +P+G QLIG+PF E TL Sbjct: 123 KLGEKTQDPIQM--YLSDIFTVSVNLAGLPAISLPIGFA-LGLPVGGQLIGKPFDEGTLL 179 Query: 475 SVGQIIE 481 V + E Sbjct: 180 KVSYLWE 186 >gi|183981004|ref|YP_001849295.1| amidase, AmiD [Mycobacterium marinum M] gi|183174330|gb|ACC39440.1| amidase, AmiD [Mycobacterium marinum M] Length = 466 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 148/488 (30%), Positives = 237/488 (48%), Gaps = 40/488 (8%) Query: 1 MSELN--FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE 58 MS+++ + ++E ++ +S VE+ +++Q I+ N ++ Y+ V+A A A + Sbjct: 1 MSDIDPCYATIAELSHAFATRALSPVEVTRAHLQRIDRLNPVLHPYMTVLADSALDEARQ 60 Query: 59 SDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++++I G+ R L G+PI +KD T+GI T A I FRP Y++TV +L GAV Sbjct: 61 AEEQIARGNHRGRLHGVPIAVKDLCFTQGIPTTAGMAIHRDFRPSYDATVVSRLRRAGAV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGKL+M E A G+ + V++PW S +++ G SS GS+ A LC AS+G Sbjct: 121 LLGKLHMCE-AAGAEYHPDFPA-VVNPW----SAERWA-GASSSGSAVATVTGLCTASLG 173 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGSIR P + TG G+KPT+GR S G+ + APSLD G + R D+ +L+AIAG Sbjct: 174 SDTGGSIRTPCTMTGATGLKPTWGRVSVHGVFAMAPSLDTIGPMARNAEDTGHVLRAIAG 233 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D T + VP+Y ++ + +G EY L + P + + + + L D GA Sbjct: 234 ADPQDPTATRVGVPEYVTG-SPEVRTVRIGFDPEYALGGVEPDVARVVRTALRVLADLGA 292 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 I E+SLP T A ++ Y G + + + E +RS +G Sbjct: 293 DIREVSLPST------------AALAAGWGAYVGAQIAV------VHERTYPSRSAEYGP 334 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + G V R ++ R L FE VD+++ P P + L Sbjct: 335 FASQLLDAGHAVSGMEIA-----RIQRERNLFAGRLAALFED-VDLLVAPVLPLANLTLD 388 Query: 418 KEEN---NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + N ++ + FT N +G P I++P P+G Q + + F E L Sbjct: 389 RFRELLFNPETLPDLLR--FTGPFNFSGSPTITLPGGFDSHGGPIGFQFVARHFDEPLLI 446 Query: 475 SVGQIIEK 482 G+ + Sbjct: 447 RAGRAFQS 454 >gi|307326384|ref|ZP_07605580.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306888047|gb|EFN19037.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 463 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 151/472 (31%), Positives = 245/472 (51%), Gaps = 39/472 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R+ ++S VELVDS ++ +E +NAY V A++AR AA ++ + G +R L GI Sbjct: 15 IRAGELSPVELVDSVLERVERLEPHLNAYATVTAEQARHAARKAADDLAAGRSRGPLHGI 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD G+ T A S + R +STV +L GAV++GK + EFA G + Sbjct: 75 PMGLKDLIDVAGVATTASSRVRADHRAQADSTVAARLGAAGAVLVGKTHTHEFAYGLTTP 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + + W + SSGGS+ AVA ++GTDTGGSIR PA+ G V Sbjct: 135 QTR-----NAWDAGRVAGG-----SSGGSAVAVAAGAATFALGTDTGGSIRVPAALNGVV 184 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYG R G+ S + SLD G +TRTV D A++L A+AG+D D + P DY Sbjct: 185 GLKPTYGLVPRHGVTSLSWSLDHVGPLTRTVEDQALVLAALAGHDPRDPASLAAPAQDYR 244 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + G+ VG+P+ + +++ ++ +Q + L+ GA +VE+ +P T+Y Sbjct: 245 PGAGEDLTGLRVGVPRNHYFEHVDTEVEAAVRQAVDRLQALGATLVEVEIPMTRYIQATQ 304 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + + EA++ R LR + E+Y+ +V+ + G + + Sbjct: 305 WGLMVPEATAYHERT------LRA----VPELYQ--------VDVRTLLEAGELMPA--- 343 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--SGSMGHIYND 432 YLRA++ RTL+++++ VDVI PT P +A +E G++ + + Sbjct: 344 --GDYLRAQRSRTLMRQEWARVLAD-VDVIAAPTVPATAAKADQETITWADGTVEAVSDA 400 Query: 433 V--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + N+ G+P++SVP +P+G+QL+G+P E L VG E+ Sbjct: 401 YVRLSAPANLTGVPSLSVPVGHDAAGLPIGMQLLGRPLGENMLLRVGHAYEQ 452 >gi|2465558|gb|AAB72184.1| YedB [Bacillus subtilis] Length = 256 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 124/253 (49%), Positives = 170/253 (67%), Gaps = 12/253 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + K+I +LVD + I+ + ++ A++ + ++ARA A+E D+ + D Sbjct: 8 ITELKQLIHKKEIKISDLVDESYKRIQAVDDKVQAFLALDEERARAYAKELDEAV---DG 64 Query: 69 RD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L G+PIG+KD TKG+ T S IL+ F P Y++TV Q+L D AV +GKLNM Sbjct: 65 RSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIYDATVVQRLQDAEAVTIGKLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFAMGSS E S Y +PW ++D+ PGGSSGGS+AAVA S+G+DTGGSI Sbjct: 125 DEFAMGSSTENSAYKLTKNPW-NLDTV----PGGSSGGSAAAVAAGEVPFSLGSDTGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 RQPASF G VG+KPTYGR SR G+++FA SLDQ G ITRTV D+A LL+AI+G D+ D+T Sbjct: 180 RQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDST 239 Query: 245 CVNLPVPDYERAL 257 N+ VPD+ +L Sbjct: 240 SANVDVPDFLSSL 252 >gi|319776876|ref|YP_004136527.1| glutamyl-tRNA amidotransferase subunit a [Mycoplasma fermentans M64] gi|318037951|gb|ADV34150.1| Glutamyl-tRNA amidotransferase subunit A [Mycoplasma fermentans M64] Length = 440 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 147/446 (32%), Positives = 227/446 (50%), Gaps = 24/446 (5%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 A E+ K A A DK + GD L IK+ FATK T A S IL+ F+P Sbjct: 12 AQAELKKNKNNAVAYVYDKALKEGDGL-LNNAVFTIKEVFATKDAKTTASSLILENFKPG 70 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 Y +T QKL D GA+++ K+ DE A+G + S +G + +P +D GGSS G Sbjct: 71 YNATCVQKLIDAGALIVAKVYCDELALGGTGTFSAFGLIKNP---LDKER--LAGGSSSG 125 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S A + A +G+DTG S+R PAS+ G VG KP+YG SR G+ ++A SLD Sbjct: 126 SVATFTDNISFA-LGSDTGDSVRLPASYNGNVGFKPSYGAISRYGMFAYASSLDTVSYFA 184 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 V D A++ + + G D D T + + + Q +Q +G+ + LS + Sbjct: 185 HNVNDIAVISQVLFGVDNKDFTSKKVKIDNV-----QKLQPKKIGVLNVSK--NLSNFVS 237 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQY--ALPAYY-IISPAEASSNLARYDGVRYGLRVE 339 +Q+ I LK VE+ P A+ A Y IIS +EASSNLA +G+ +G R E Sbjct: 238 NNFQELIVKLKANKNIKVEVIEPQEDLLNAVKAIYDIISYSEASSNLANLNGIAFGSRKE 297 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 G+ E+ NTRS GFG+ V+ R+ +GT+ L S +L+A++ R L K ++ + + Sbjct: 298 GESWEEIMTNTRSQGFGKMVQRRLTLGTFFLHSENQKDLFLKAQQGRRLFK-EYWDKLHK 356 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 D+++ P A + K+ N M +I N+AG P+I++P + + +P+ Sbjct: 357 QYDIVIYPAYADVAPYINKKNKNYKYMEYI-----LTGSNLAGNPSITIP-WIKKDNLPI 410 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAG 485 L + +++E L S +E+ G Sbjct: 411 NLAIDADIYQDEKLLSHALWMEEFLG 436 >gi|310772399|dbj|BAJ23964.1| amidase [uncultured bacterium] Length = 467 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 152/484 (31%), Positives = 223/484 (46%), Gaps = 40/484 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + L F ++E RS+++S VE+ I+ IE + +V + A A +++ Sbjct: 3 LDNLPFAQITELAKAYRSRELSPVEVTRMMIERIERLDPNAAQLHDVTPEIALEQARKAE 62 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G+AR ++G+P+G+KD TKG+ T + + F P + TV +KL + GAVML Sbjct: 63 ADFGRGEARSPMQGVPVGVKDLCFTKGVRTTWGTTVYGDFVPGEDCTVVRKLAEAGAVML 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL+M E A S P ++PW + PG SS GS A A LC +IGTD Sbjct: 123 GKLHMTEGAF--STHHPDLPPPVNPWNA-----DHWPGVSSSGSGVATAAGLCFGAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P+ G GIKPT+GR SR G + A SLD G +TR+ D+ +L A+AG D Sbjct: 176 TGGSIRFPSGANGLTGIKPTWGRVSRQGAFALAASLDHIGPMTRSAADAGAMLGAMAGVD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + VPDY L Q I+G+++G Y + K + L D GA Sbjct: 236 PLDPTTLEASVPDYLAGLGQGIRGLSIGFDPTYAFEVTDADTRKVVEDARRVLSDLGATF 295 Query: 300 VEISLPHTQYAL----PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 VEI +P + ++ AY + A A + YG + G + + R +G Sbjct: 296 VEIEMPTSVVSMYRDWAAYCSVETAIAHAETYPARASEYGPVLAG-----LIDVGRGLG- 349 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +R R K + FE+ VD++LTP P Sbjct: 350 --------------------AMDLMRIEHERLEFKGALRKIFER-VDLLLTPVHPFGNPS 388 Query: 416 LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + E G I + + FT +M+G P I++P +P+G QLIG+ E L Sbjct: 389 NAELEAIFERPGGIDDALRFTGPFDMSGSPTITLPGGFDPAGLPIGFQLIGRHLDEALLV 448 Query: 475 SVGQ 478 G Sbjct: 449 RAGH 452 >gi|260948088|ref|XP_002618341.1| hypothetical protein CLUG_01800 [Clavispora lusitaniae ATCC 42720] gi|238848213|gb|EEQ37677.1| hypothetical protein CLUG_01800 [Clavispora lusitaniae ATCC 42720] Length = 439 Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 158/474 (33%), Positives = 229/474 (48%), Gaps = 70/474 (14%) Query: 37 SNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHIL 96 ++ + N+ + V+AQ AR + L G K AT S +L Sbjct: 2 ASDKFNSIVHVLAQAARPLSPTGV----------LSGKTFAAKANIATSRAPVDCASRVL 51 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 D + + ST + L GAV +G NMDEF MGS++ S +G V++P ++ P Sbjct: 52 DSYTGPFTSTAVRLLEQAGAVCIGTTNMDEFGMGSASTHSSHGAVVNP--------QYYP 103 Query: 157 GG-----SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 SSGGS+A VA L ++GTDTGGS+RQPA++ G VG KPTYG SR G++++ Sbjct: 104 ANHVAGGSSGGSAACVAAGLADFALGTDTGGSVRQPAAWCGVVGFKPTYGSISRFGVVAY 163 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 A SLD GI+ R+VR + + + +D+ D T + L V R VG+P++ Sbjct: 164 AQSLDTVGILARSVRTTRDVFGVLDKWDDNDVTALPLSV----RGRKAKEGPWVVGVPEQ 219 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 L + P + + + LK G KIV +S+P +L AYY ++ AEA+SNLARYDG Sbjct: 220 MLLGEVGPEALEALELALVGLKKLGHKIVPVSIPALSRSLSAYYTLATAEAASNLARYDG 279 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VRYG EN + FG EV+ R++ GTY LSS SHY A +R + Sbjct: 280 VRYG------------ENEKGHSFGVEVRRRVLSGTYTLSSES-GSHYKHATLVREKLVE 326 Query: 392 DFTEAFE-----------------------QGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + F GVDV+L PT A + + + Sbjct: 327 ELNCVFASAHSFVGVGEKHKDVARNGPDSGSGVDVLLAPTVLGRAPERDVYDQITRNFIE 386 Query: 429 IY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 Y DV TV ++AGLP +SVP +G+Q++ Q + T SV + +E Sbjct: 387 GYAGDVLTVPASLAGLPTVSVPF------NGVGIQVMAQHGDDATALSVSEAVE 434 >gi|330971449|gb|EGH71515.1| amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 472 Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 149/488 (30%), Positives = 248/488 (50%), Gaps = 40/488 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L+F+ ++E+ LR+KD+S V+L ++ + I++ +S++NAYI V A++A A +++ Sbjct: 5 SNLHFLTIAEAGRLLRAKDLSPVDLTEAVLSQIDSVDSRVNAYITVTAEQALDTARQAET 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G+ + + GIP+GIKD T G T S + P ++TV ++L D GAV +G Sbjct: 65 DISAGNWKGPMHGIPVGIKDIIDTAGTLTSCHSALFKDRVPTRDATVVKQLKDAGAVSMG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EFA+G ++ + P +PW ++D P GSS GS+AAVA +C ++GTDT Sbjct: 125 KTATWEFAIGGTSFDLPWPPARNPW-NLDHD----PAGSSSGSAAAVAAGMCLGALGTDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA++ G G KPTYG SR G+ + S D G + TV D A++L+ +A D Sbjct: 180 GGSIRGPAAWCGIAGFKPTYGLVSRHGVAPLSFSQDHVGPMCWTVEDCALMLQVLAARDP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPK---EYRLDYLSPTIDKTWQQGISWLKDAGA 297 D PV DY A+ ++G+ +G+ + E + +P + ++ + +D+G Sbjct: 240 RDPASAQGPVVDYSAAIQGDLKGVRIGVVRHFFEQDSEADAPAV-GAFENALQVFRDSGC 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 I ++L + L YD R E + + + R +G Sbjct: 299 SIQNVTL------------------APLLTYYDASGLIERAEAFSVHQSTLSDRPDLYGA 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + RI G ++ + + YL A + R + + Q VDV+L PT +A LG Sbjct: 341 LGRQRIGSGAFIAA-----TDYLNALRWRRSLIEQALDVMGQ-VDVLLMPTRGNAAMKLG 394 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + +G ++T N+ G PA+SV + + +PL +Q++ +PF + VG Sbjct: 395 SYDLLTG------RQIYTRPFNLLGFPALSVCSGFTDDGLPLAMQVVARPFEDALALKVG 448 Query: 478 QIIEKEAG 485 E++ G Sbjct: 449 HFFERQTG 456 >gi|238809661|dbj|BAH69451.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 440 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 147/446 (32%), Positives = 226/446 (50%), Gaps = 24/446 (5%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 A E+ K A A DK + GD L IK+ FATK T A S IL+ F+P Sbjct: 12 AQAELKKNKNNAVAYVYDKALKEGDGL-LNNAVFTIKEVFATKDAKTTASSLILENFKPG 70 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 Y +T QKL D GA+ + K+ DE A+G + S +G + +P +D GGSS G Sbjct: 71 YNATCVQKLIDAGALRVAKVYCDELALGGTGTFSAFGLIKNP---LDKER--LAGGSSSG 125 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S A + A +G+DTG S+R PAS+ G VG KP+YG SR G+ ++A SLD Sbjct: 126 SVATFTDNISFA-LGSDTGDSVRLPASYNGNVGFKPSYGAISRYGMFAYASSLDTVSYFA 184 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 V D A++ + + G D D T + + + Q +Q +G+ + LS + Sbjct: 185 HNVNDIAVISQVLFGVDNKDFTSKKVKIDNV-----QKLQPKKIGVLNVSK--NLSNFVS 237 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQY--ALPAYY-IISPAEASSNLARYDGVRYGLRVE 339 +Q+ I LK VE+ P A+ A Y IIS +EASSNLA +G+ +G R E Sbjct: 238 NNFQELIVKLKANKNIKVEVIEPQEDLLNAVKAIYDIISYSEASSNLANLNGIAFGSRKE 297 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 G+ E+ NTRS GFG+ V+ R+ +GT+ L S +L+A++ R L K ++ + + Sbjct: 298 GESWEEIMTNTRSQGFGKMVQRRLTLGTFFLHSENQKDLFLKAQQGRRLFK-EYWDKLHK 356 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 D+++ P A + K+ N M +I N+AG P+I++P + + +P+ Sbjct: 357 QYDIVIYPAYADVAPYINKKNKNYKYMEYI-----LTGSNLAGNPSITIP-WIKKDNLPI 410 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAG 485 L + +++E L S +E+ G Sbjct: 411 NLAIDADIYQDEKLLSHALWMEEFLG 436 >gi|167522619|ref|XP_001745647.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775996|gb|EDQ89618.1| predicted protein [Monosiga brevicollis MX1] Length = 422 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 142/413 (34%), Positives = 225/413 (54%), Gaps = 14/413 (3%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +K AT+ T S L + +++TV +L +G + K NMDEF MGS Sbjct: 11 VAVKANIATREGPTNCGSAFLADYTSPFDATVVDRLKQHGYRIGLKTNMDEFGMGSFGLH 70 Query: 136 SYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G V +P ++D+T + GGSS GS+A VA ++G+DTGGS+R PA+F G V Sbjct: 71 SAFGSVTNP--ALDATAQPRVAGGSSSGSAAVVAAGQVPLALGSDTGGSVRVPAAFCGIV 128 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KP+YGR SR G++S+A S D G++ +V + ++ + G+D D T +N+ D+ Sbjct: 129 GYKPSYGRLSRWGLVSYASSFDCVGVLASSVDQAEAAMQVMQGHDSRDETSLNV---DWA 185 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA-KIVEISLPHTQYALPA 313 Q VG+ +E + L+P + W+ + L +I +S+P + AL A Sbjct: 186 AQEAQDTPVRRVGVIQEAVIHELAPAMHDRWELALQQLAQQHCLEIDTVSVPTLKQALAA 245 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKD----ILEMYENTRSIGFGQEVKHRIMIGTYV 369 YY++ AEA+SNL+RY+G+ YG + + +MY + R+ G VK RIM G ++ Sbjct: 246 YYMLVSAEAASNLSRYNGLCYGAQSGAPETFDGFFDMYSSNRTQYLGDSVKQRIMTGNHI 305 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 LS +DS+YL A ++R + + FE+ VDV++ PTT A P + N + Sbjct: 306 LSRGKFDSYYLTAARVRAQLTLELQRVFER-VDVLVLPTTADVA-PTIEAARNIEPVQEY 363 Query: 430 YNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 DV+TV ++AGLPAISVP + P+GLQ++ + V +++E Sbjct: 364 ATDVYTVPFSLAGLPAISVPCGRDPQSSAPMGLQVVAPRQLDHRAAHVARLLE 416 >gi|148258348|ref|YP_001242933.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] gi|146410521|gb|ABQ39027.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] Length = 470 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 157/491 (31%), Positives = 241/491 (49%), Gaps = 37/491 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E M ++E + K +S+VE+ S + I ++NA++ + ++ A AA E+D Sbjct: 3 TEPALMTLTEVAKAIAEKKLSSVEVTRSCLHRIAEWQPKLNAFMAIESEPALKAAAEADA 62 Query: 62 RIIN-GDARDLEGIPIGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVML 119 + G L G+P+ KD + G H C S I F ST Q+L D GA+ L Sbjct: 63 ALAKDGPKGPLHGVPLAHKDMYYEAG-HVSTCGSLIRRDFVATTTSTALQRLKDAGAIRL 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L M EFA G + ++YGPV +PW+ + GGSS GS +AV L A++G+D Sbjct: 122 GTLQMAEFAYGPTGHNAHYGPVHNPWKL-----GYVTGGSSSGSGSAVGARLTFAALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA+F G G+K T+GR SR G + + SLD G + +T D A++L +AG D Sbjct: 177 TGGSIRMPANFCGVTGLKVTWGRVSRAGAMPLSQSLDTVGPLAQTAEDCALMLGLMAGPD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + PV DY A SI+G+ +G+PK + +D L P + + I LK GA + Sbjct: 237 PEDPTASHAPVQDYVAATQASIKGLKIGVPKAFYVDDLDPEVARCLDATIGLLKTEGADV 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V + LP + A ++ EA++ R+ M E R +G +V Sbjct: 297 VSVELPDQRQLTAACQLVLAVEAAAFHKRW----------------MIE--RPQDYGPQV 338 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R+ V YL A + R A QG+D ++ P +P P E Sbjct: 339 LMRLQNALAV-----SGVTYLEALRWRGAALAAHVAA-TQGIDAVIAPVSPLVT-PSIAE 391 Query: 420 ENNSGSMGH--IYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + G G + + FT VN GLP++++P +P+G+QLIG+ F E T+ + Sbjct: 392 SDVGGVPGAEAVIQRITRFTRPVNYLGLPSLAIPTGFTATGLPVGMQLIGRSFDEATILT 451 Query: 476 VGQIIEKEAGY 486 +G ++ + Sbjct: 452 IGAAFQRATDF 462 >gi|298246150|ref|ZP_06969956.1| Amidase [Ktedonobacter racemifer DSM 44963] gi|297553631|gb|EFH87496.1| Amidase [Ktedonobacter racemifer DSM 44963] Length = 476 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 148/506 (29%), Positives = 248/506 (49%), Gaps = 51/506 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++++++ E + L++ I+ ELV+ + IE ++++ A++ V+ ++A A AE++++ + Sbjct: 1 MSYLSIREVAEELQAGIITPTELVEETLNLIEERDTEVEAFVTVMREEAMAQAEQAEREL 60 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L GIPI IKD A KG+ T S +L ++TV + L +GA+++GK Sbjct: 61 RTGLKRGPLHGIPIAIKDLIAVKGVRTTGSSQVLAEHVSEEDATVIELLRKSGAILIGKT 120 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N EFA G Y P +PW +T + G ++ ++ V G +IGTDTGG Sbjct: 121 NTYEFAYGP-----YAPPTRNPWDLTRTTGGSSGGSAAAVAAGMVLG-----AIGTDTGG 170 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P++ G G+KPTYGR S G++ + SLD G I R+ D A + AIA YD D Sbjct: 171 SIRIPSALCGVTGLKPTYGRVSCHGVLPLSWSLDHVGPIARSAEDCAFIFDAIAKYDPRD 230 Query: 243 ATCVNLP-----------VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 V+ P + E S+QG+ +G+P+E + L P I W+ + Sbjct: 231 PNSVSGPPSSPSRSTATLIEGAEGRGPLSLQGLRLGMPQEGFVAPLDPEIHMAWRGALHV 290 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L++ GA++V + LP + Y ++ EAS LA ++ G D+ TR Sbjct: 291 LEENGAELVNVELPRP--TMTTYRMVQKPEAS--LAH---MQQGWFPHQGDLYTELVRTR 343 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + GQE+ YL+A++ R + + VD + PT Sbjct: 344 -LREGQEIP---------------AVEYLKAQQERRVFTSQLRSIL-RTVDAFVLPTQAM 386 Query: 412 SAFP---LGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +A P +G+E +G + + + T+ N+ G PA+S P + +P+GLQ+ G+ Sbjct: 387 AAIPAEQMGQEVTINGVQENATDAMLRMTMPFNLVGFPAVSFPCGFTSEHLPIGLQIAGK 446 Query: 467 PFREETLFSVGQIIEKEAGYFRPHKW 492 PF E T+ + ++ + R W Sbjct: 447 PFEEATVLRIAHAYQQLTDWHRREAW 472 >gi|224005130|ref|XP_002296216.1| hypothetical glutamyl-tRNA amidotransferase [Thalassiosira pseudonana CCMP1335] gi|209586248|gb|ACI64933.1| hypothetical glutamyl-tRNA amidotransferase [Thalassiosira pseudonana CCMP1335] Length = 410 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 144/425 (33%), Positives = 215/425 (50%), Gaps = 35/425 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW-DNGAVMLGKLNMDEFAM 129 L+GIP+ IK A + D YES + +KL D GAV++G NMDEF M Sbjct: 6 LDGIPVTIKANIAVGKWNVPHTIKGNDTAEGAYESDIARKLLKDCGAVLIGITNMDEFGM 65 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 GS +ET+ Y SP S + +S GSS SIGTDTGGS+R P++ Sbjct: 66 GS-DETTKYSNQSSPLLSPGGSSSGAAAATSHGSSLL--------SIGTDTGGSLRLPSA 116 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 +T TVG KP+YG SR G++S+A SLD G + + + I + + Y + Sbjct: 117 WTSTVGFKPSYGTWSRYGVVSYASSLDTVGFVAGSTECAEIAWRCLDNYKGTTGEDRSYL 176 Query: 250 VPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAKIVEISLPHT 307 + D + +Q + +GIP + L+ P I +TW +G + L+ GA + ++S Sbjct: 177 QQSSSDSTDTKPLQSVRIGIPTAFSLEESPPLISQTWSEGANLLQFVGGATLTKVSSQWV 236 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILEMYEN----------TRSIGF 355 + + AYY+++ AEASSNL+RYDGVR+G+ + + + LE N TRS GF Sbjct: 237 KLSCAAYYVLACAEASSNLSRYDGVRFGMDIDFDADNNLESLSNMTVLEKQISATRSFGF 296 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G EV+ R++ GT VLSS + +HY A +R + R F D T A Sbjct: 297 GDEVQRRVLAGTSVLSSDRFHTHYEAAALVRAKLSRSLEGVFRSESD--------TEAME 348 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + + S NDV T+ +++ G P++SVP + +GLQ+ G E T+F Sbjct: 349 CDEGKVDIDSTAAFANDVMTIPISLGGFPSVSVP---FQVSTMVGLQVFGARGSEATIFK 405 Query: 476 VGQII 480 V Q + Sbjct: 406 VAQAL 410 >gi|160895633|ref|YP_001561215.1| amidase [Delftia acidovorans SPH-1] gi|160361217|gb|ABX32830.1| Amidase [Delftia acidovorans SPH-1] Length = 480 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 153/484 (31%), Positives = 246/484 (50%), Gaps = 40/484 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIIN 65 +++ + LR+ ++ L S + I + ++A+ + A A AA +D R + Sbjct: 24 LSIRQMASALRAGKTTSELLTRSALGRIRAMDIDIHAFTNLDASGAMEAARSADMARAES 83 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GI + IKD + G+ T S + + P +ST ++L D GAV+LGKL Sbjct: 84 ADLPLLHGIAVAIKDVYDVAGLPTTCQSWLSLDYVPEEDSTPVRRLRDAGAVILGKLATH 143 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA+G+ + + +PW PGGSS GS AA+A ++GT TGGSI Sbjct: 144 EFAIGAPSPDLPFPAARNPWDL-----AHIPGGSSSGSGAAIAAGFTRLALGTCTGGSIL 198 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA++ G VG+KPTYGR S+ G+ A +LD G ++R+V D+AI L+ +AG+D D Sbjct: 199 IPAAWCGAVGLKPTYGRVSKHGVFPLAWTLDHCGPLSRSVEDAAIALQVLAGHDPLDPAS 258 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 PV DY L+Q ++G+T+G+P+++ SPT + + + L +AGA+ + +S Sbjct: 259 STEPVDDYCTGLEQGVKGLTIGVPQDHFQSSPQASPTFLSAFDRTAALLAEAGARPIHVS 318 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LPH+Q L A +I AE + +D+ +R + +G+ R+ Sbjct: 319 LPHSQQFLAAGRVILSAEM-------------FTIHAQDL-----RSRPLDYGELTAARL 360 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++G V S YL A ++R ++ A ++ DV+LT T +A Sbjct: 361 LLGATVSS-----EDYLNALRVRRMLAARVDAALDR-CDVLLTAITLDTA-------PRF 407 Query: 424 GSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M H + V T A N+ G PAISVP L + +PL +Q++G+ F E + V + IE+ Sbjct: 408 DPMPHFRHWPVQTHAFNVTGHPAISVPVGLSPQGLPLAVQVVGRYFDEARILQVARAIER 467 Query: 483 EAGY 486 G+ Sbjct: 468 LTGW 471 >gi|209520438|ref|ZP_03269199.1| Amidase [Burkholderia sp. H160] gi|209499130|gb|EDZ99224.1| Amidase [Burkholderia sp. H160] Length = 468 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 234/497 (47%), Gaps = 43/497 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L++ ++ + +LR++D+SAVEL ++ + +E+ ++AY + A A +D Sbjct: 1 MTHLHYSSLLDVAAQLRTRDLSAVELTEAMLNRVEHLQPSLHAYATKSPELALRQARAAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G R L GIP+ +KD AT GI T A I RP ++TV ++L D GAV+L Sbjct: 61 AEIAAGRYRGPLHGIPVAVKDICATAGIATAAGMPIHANHRPADDATVVRRLADAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVIS----PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 GKL + E A + P I+ PW + + G SS GS A A +C + Sbjct: 121 GKLQLTEGAFAKHH------PQITVPRNPWNA-----GYYAGASSSGSGVATAAGMCFGA 169 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G+DTGGSIR PAS G G+KPT+GR SR G+ APSLD G RT D+ +L AI Sbjct: 170 LGSDTGGSIRFPASANGVTGLKPTWGRVSRYGVFPLAPSLDHVGPFARTAADAGAILGAI 229 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG D D T + PVPDY LD ++G+ +GI Y I LKDA Sbjct: 230 AGADPLDPTTLQAPVPDYLAKLDHGLRGLCIGIDASYNETGADAAIVAMLHDAADVLKDA 289 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEAS-SNLARYDGVR--YGLRVEGKDILEMYENTRS 352 GA +V++S+P + + + EAS + A + R YG V G I + E+ R Sbjct: 290 GATLVDVSVPDPCAIVDEWATCAGVEASLVHEATFPSRRSEYGPAVSGS-IAALIEHGRG 348 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + +RA R L A VD++L P P + Sbjct: 349 VS---------------------ATDLMRAHHAR-LAFTGALAALLTRVDLLLIPAQPLA 386 Query: 413 AFPLGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 F L +EE S + + F +M+G P I++P+ + MP+ Q + E Sbjct: 387 DFTLEQEERLFASPEALAAFLRFATPFDMSGSPTITLPSGFTARGMPVAFQFVAPHLGEA 446 Query: 472 TLFSVGQIIEKEAGYFR 488 L G ++ + R Sbjct: 447 QLIRAGHAWQQATDWHR 463 >gi|308189692|ref|YP_003922623.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma fermentans JER] gi|307624434|gb|ADN68739.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma fermentans JER] Length = 440 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 145/443 (32%), Positives = 225/443 (50%), Gaps = 24/443 (5%) Query: 46 EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 E+ K A A DK + G+ L IK+ FATK T A S IL+ F+P Y + Sbjct: 15 ELKKNKNNAVAYVYDKVLKEGNGL-LNNAVFTIKEVFATKDAKTTASSLILENFKPGYNA 73 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 T QKL D GA+ + K+ DE A+G + S +G + +P +D GGSS GS A Sbjct: 74 TCVQKLIDAGALKVAKVYCDELALGGTGTFSAFGLIKNP---LDKER--LAGGSSSGSVA 128 Query: 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV 225 + A +G+DTG S+R PAS+ G VG KP+YG SR G+ ++A SLD V Sbjct: 129 TFTDNISFA-LGSDTGDSVRLPASYNGNVGFKPSYGAISRYGMFAYASSLDTVSYFAHNV 187 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW 285 D A++ + + G D D T + + + Q +Q +G+ + LS + + Sbjct: 188 NDIAVISQVLFGVDNKDFTSKKVKIDNV-----QKLQPKKIGVLNVSK--NLSNFVSNNF 240 Query: 286 QQGISWLKDAGAKIVEISLPHTQY--ALPAYY-IISPAEASSNLARYDGVRYGLRVEGKD 342 Q+ I LK VE+ P A+ A Y IIS +EASSNLA +G+ +G R EG+ Sbjct: 241 QELIVKLKANKNIKVEVIEPQEDLLNAVKAIYDIISYSEASSNLANLNGIAFGSRKEGES 300 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 E+ NTRS GFG+ V+ R+ +GT+ L S +L+A++ R L K ++ + + D Sbjct: 301 WEEIMTNTRSQGFGKMVQRRLTLGTFFLHSENQKDLFLKAQQGRRLFK-EYWDKLHKQYD 359 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 +++ P A + K+ N M +I N+AG P+I++P + + +P+ L Sbjct: 360 IVIYPAYADVAPYINKKNKNYKYMEYI-----LTGSNLAGNPSITIP-WIKKDNLPINLA 413 Query: 463 LIGQPFREETLFSVGQIIEKEAG 485 + +++E L S +E+ G Sbjct: 414 IDADIYQDEKLLSHALWMEELLG 436 >gi|192289255|ref|YP_001989860.1| Amidase [Rhodopseudomonas palustris TIE-1] gi|192283004|gb|ACE99384.1| Amidase [Rhodopseudomonas palustris TIE-1] Length = 470 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 155/487 (31%), Positives = 239/487 (49%), Gaps = 33/487 (6%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + ++E + + SK +S+ E+ + + I + ++NA++ + + A AAA+ +D + Sbjct: 8 LLTLTEVAEAIASKKLSSREVTQACLDRIARAQPKLNAFMAIEPESALAAADAADTALAK 67 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ + L G+P+ KD + G S I F ST Q+L D G V LG L M Sbjct: 68 GERKGPLHGVPLAHKDMYYETGFAVTCGSKIRRDFVAPTTSTALQRLKDAGQVRLGTLQM 127 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA G + ++YG V +PW D T GGSS GS +AVA L A++G+DTGGSI Sbjct: 128 SEFAYGPTGHNAHYGAVRNPW----GLDHIT-GGSSSGSGSAVAARLTFAALGSDTGGSI 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F G G+K T G SR G + + SLD G + RT D A+L +AG D D T Sbjct: 183 RMPAHFCGVTGLKTTVGLVSRAGAMPLSHSLDTVGPLARTAEDCALLTGLMAGADPADPT 242 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVPDY A Q +QG+++GIPK + +D L P + + S L G ++VE+ L Sbjct: 243 ASHRPVPDYLAATRQPLQGISIGIPKSFYVDDLDPEVARVLGDTKSALAREGVRVVEVEL 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A ++ L VE + R +G +V R+ Sbjct: 303 PDQRQLSAAAQLV------------------LAVEAAGFHGQWMRERPQDYGPQVLMRLQ 344 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NNS 423 + + YL A + R + +F A VD +L P +P A + + + NS Sbjct: 345 NALAIPAVT-----YLEAMRWRGVALAEFVAAVAG-VDAVLAPVSPVPAPTIAESDVGNS 398 Query: 424 GSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + + FT +N GLP++++P +P+GLQLIG+PF E TL +G + Sbjct: 399 LNAEAVIQRLTRFTRPINYLGLPSLALPCGFSNAGLPIGLQLIGRPFDEATLLRIGAGWQ 458 Query: 482 KEAGYFR 488 + + R Sbjct: 459 RATDFHR 465 >gi|257067691|ref|YP_003153946.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Brachybacterium faecium DSM 4810] gi|256558509|gb|ACU84356.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Brachybacterium faecium DSM 4810] Length = 461 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 150/477 (31%), Positives = 250/477 (52%), Gaps = 47/477 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + +++ ++ RL + ++ EL ++ + IE +S + A+I V + AR A+E+D R Sbjct: 1 MTTVSLLDAAQRLARAETTSRELTEACLARIEEHDSALRAFITVESDGARRGADEADARR 60 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L+G+P+ +KD A G T S I P + V +L +GAV LG Sbjct: 61 REGQVRGPLDGLPLAVKDNLAVAGRVTTMGSAIYRSHLPAENAGVVDRLDTHGAVRLGAT 120 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ EFA+G + E ++G +PW + + TPGGSSGGS+ AV+ + ++G+DT G Sbjct: 121 NLHEFALGVTTENPHFGICRNPWDT-----ERTPGGSSGGSAVAVSAGMALGALGSDTSG 175 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ G VG+KPTYGR S G A SLD G++T+T D+A+LL AI+G+D Sbjct: 176 SIRIPAAACGIVGLKPTYGRVSSYGCYPEAWSLDHVGVLTQTAADAALLLDAISGHDP-- 233 Query: 243 ATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +LP+P A + + + + +GI +++ D + P ++ + + + +AGA++V Sbjct: 234 RVPSSLPLPPTMTAQEMAAEAPLRIGIEEDFFFDRIDPAVEDVVRGTLGAMVEAGAQLVP 293 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ++LP A A +I AE + A +D R G++ +G++V+ Sbjct: 294 LTLPSLAEATFALTVIDTAETT---AFHDD---QFRRRGEE------------YGEDVRQ 335 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP--------TSA 413 + GT L S YL A++IR+ +K +F AF + VDVI +PT P + Sbjct: 336 LVECGT--LPSAV---DYLHAQQIRSRLKGEFHRAFSE-VDVIASPTLPIRTPRVGEATV 389 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 G+ + G + + N+ G+P+ SVP + + +MP+G+Q +G E Sbjct: 390 QVTGESRDRDGELMRLVG-----PSNLVGIPSASVPCGMVD-EMPVGIQFLGPALGE 440 >gi|290559876|gb|EFD93199.1| Amidase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 403 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 134/425 (31%), Positives = 206/425 (48%), Gaps = 48/425 (11%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 + +EN NS++NA+ + D + EG I +KD +GI Sbjct: 17 VNHLENRNSELNAFNFI-------------------DKTEKEGKIISVKDNICVQGIPAT 57 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDS 150 A S +L G+ P++ +TV +L NG ++GK NMDEF GS +G Sbjct: 58 ASSKVLSGYVPNFNATVVDRLQKNGFAVVGKTNMDEFGFGS------FGINSDKIAHNPF 111 Query: 151 TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 ++ GGSS GS+ A A SI TGGSI PASF G VG+ PTYG SR G+I Sbjct: 112 DQRYVAGGSSSGSAIATAIIKNHISIAESTGGSISTPASFCGVVGLTPTYGAISRYGLID 171 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 +A SLD+ G++ R ++ ++G DE D T V+ + + + K Sbjct: 172 YANSLDKIGVMGRNSESLKYVMNIVSGQDEKDTTSVSNTLEEVRK-------------DK 218 Query: 271 EYRLDYLSPTIDKT----WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 Y +D + I++T +++ +S G KI + + + Y+LPAYYI+S AEAS+NL Sbjct: 219 LYVIDNFTKNINQTVLDRFEELLSRFSSDGYKIEHVKIDNLDYSLPAYYILSMAEASTNL 278 Query: 327 ARYDGVRYGLRVEGKDI--LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 A+Y G +YG +++ + E + R FG E K RI++GT++ +Y +A Sbjct: 279 AKYQGFKYGHKLKQFSMGYNEFFTEARK-DFGMEAKRRIILGTFIRGKSFKQKYYEKALS 337 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 IR I + ++G I++PT P P E + + D+ T+ N+ G P Sbjct: 338 IRAEIIKRMKSFLKEG--FIISPTAPILT-PKIDEVKDITPVEEYSMDMLTIPPNLCGFP 394 Query: 445 AISVP 449 IS P Sbjct: 395 HISFP 399 >gi|289676049|ref|ZP_06496939.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. syringae FF5] Length = 239 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 153/224 (68%), Gaps = 5/224 (2%) Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 +L+ S++G+ +G+PKEY L P I + + + L+ GA + E+SLP+ Q+A+PAYY Sbjct: 4 SLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKEVSLPNLQHAIPAYY 63 Query: 316 IISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ RIM+G Y LS+ Sbjct: 64 VIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMVGAYALSAGY 123 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD++YL+A+KIR LIK DF AF VDVIL PTTP A+ +G + N+ + D + Sbjct: 124 YDAYYLQAQKIRRLIKNDFMSAFVD-VDVILGPTTPNPAWKIGAKTND--PIAEYLEDFY 180 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V Sbjct: 181 TITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAH 223 >gi|167615438|ref|ZP_02384073.1| glutamyl-tRNA, putative [Burkholderia thailandensis Bt4] Length = 439 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 144/472 (30%), Positives = 225/472 (47%), Gaps = 41/472 (8%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCF 82 +EL + + I + +NAYI + A+ A A A +++ I G R L G+P+ +KD F Sbjct: 1 MELTQAILARIARLDPHLNAYIRITAESALADARRAEQEIARGTDRGPLHGVPVAVKDIF 60 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 KGI T A I ++TV ++L GAVMLGKL+M E A + + T + P Sbjct: 61 DIKGIPTTAGMGIRANAVADEDATVVRRLRSAGAVMLGKLSMTEGAY-AEHRTPFAAPR- 118 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +PW D + PG SS GS+ A+ LC A++ ++TGGSIR PA+ G GIKPT+GR Sbjct: 119 NPWH-----DAYWPGASSSGSAVAICAGLCYAALASETGGSIRLPAAANGVTGIKPTWGR 173 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 SR A +LD G+I R+ D+ +L+AIAG D D T LPVPD+ AL + ++ Sbjct: 174 VSRHRTFELAATLDHVGVIARSAADATAVLEAIAGADPADPTTSRLPVPDFPSALTRELK 233 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE- 321 G+ +G+ + L ++ I+ L++ GA+IV ++LP + ++ + + Sbjct: 234 GVRLGVDDSWLGARLGDAAERAISTAIAVLRELGAEIVAVTLPDVSDMIWDWFPVCAVQT 293 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 A ++ A Y + G + + E R++ G E++ Sbjct: 294 ALAHEATYPSRKNEY---GASLAALIEQGRALS-GTELQ--------------------- 328 Query: 382 ARKIRTLIKRD-FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV--FTVAV 438 R L++R F DV+ P A + E S + D+ FT Sbjct: 329 ----RLLLRRQVFRGKLAAVFDVVDIVALPVLADGVPTIERMSKVDDDLIADLHRFTCPF 384 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 NMAG+P+I +P + +PL Q+IG F E L V + + H Sbjct: 385 NMAGIPSIVLPCGMSANGLPLVFQMIGTHFSEALLACVADAYQASTEWHLRH 436 >gi|322436884|ref|YP_004219096.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321164611|gb|ADW70316.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 519 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 154/474 (32%), Positives = 234/474 (49%), Gaps = 37/474 (7%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 + IS+ EL ++ + I +++++A+I V+ +KA AAA ++D I G R L GIPI Sbjct: 60 RQISSTELTEASLARINIYDAKLDAFITVMKEKALAAAAQADTEIRAGMYRGPLHGIPIA 119 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD T G T S + + P ++ V +L GAV++GK N+ EFAMG ETSY Sbjct: 120 AKDNIDTAGTRTTGASQLFEDRVPTEDAPVIARLHAAGAVLVGKTNLHEFAMGG-GETSY 178 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +GP +PW + +T SS GS AA+A LC A++GTDT GS+R PAS+ G VG+K Sbjct: 179 WGPARNPWNLLHNTGG-----SSAGSGAAIAADLCYAALGTDTAGSVRMPASYCGVVGLK 233 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYG G I SLD G +TRTV D+AI+L +AGYD+ D T V DY + Sbjct: 234 PTYGLVPIRGFIPLTVSLDHCGPLTRTVEDTAIMLNVMAGYDKLDTTSVEHAKEDYVSGM 293 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 Q ++G +G+P + D L P + K + I+ L A E+SLP Sbjct: 294 KQPVRGFRLGLPVGH-FDTLQPDVRKAVMEAIALLTKMTAGAKEVSLP------------ 340 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 P AS+ G E + Y +S + + + R+ + ++ + Sbjct: 341 PPGNAST---------VGALGETYAWHDPYFKNQSAKYMVQERRRLEMAQ---TNHVWSV 388 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 Y+ A +++R +AF VD+++ PT A P +E G+ + Sbjct: 389 DYIHALWELQMLRRTIDDAFTD-VDLVVLPTMRVVA-PTIQELQKRGAETKPLDPWIASD 446 Query: 438 V---NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 N GLPAISVP + +P+GL + G F E + ++ E+ + + Sbjct: 447 CGYFNAYGLPAISVPCGFSQSGLPIGLMIAGPHFAESKVLALAHAYEQATDWHK 500 >gi|146338015|ref|YP_001203063.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp. ORS278] gi|146190821|emb|CAL74826.1| putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Bradyrhizobium sp. ORS278] Length = 470 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 157/491 (31%), Positives = 241/491 (49%), Gaps = 37/491 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E M ++E + K +S+V++ S + I ++NA++ + ++ A AA E+D Sbjct: 3 TEPALMTLTEVAKAIAEKKLSSVDVTRSCLHRIAQWQPKLNAFMAIESEPALKAAAEADA 62 Query: 62 RIIN-GDARDLEGIPIGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVML 119 + G L G+P+ KD + G H C S I F ST Q+L D GA+ L Sbjct: 63 ALAKDGPKGPLHGVPLAHKDMYYEAG-HVSTCGSLIRRDFVATTTSTALQRLKDAGAIRL 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L M EFA G + ++YGPV +PW+ + GGSS GS +AV L A++G+D Sbjct: 122 GTLQMAEFAYGPTGHNAHYGPVHNPWKL-----GYVTGGSSSGSGSAVGARLTFAALGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA+F G G+K T+GR SR G + + SLD G + +T D A+LL +AG D Sbjct: 177 TGGSIRMPANFCGVTGLKVTWGRVSRAGAMPLSQSLDTVGPLAQTAEDCALLLGLMAGPD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T V DY A SI+G+ +G+PK + +D L P + + I+ LK GA + Sbjct: 237 PEDPTASAAQVQDYVAATQSSIKGLKIGVPKSFYVDDLDPEVARCLDAAITVLKTEGADV 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V++ LP + A ++ EA++ R+ M E R +G +V Sbjct: 297 VQVELPDQRQLTAACQLVLAVEAAAFHKRW----------------MIE--RPQDYGPQV 338 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R+ V YL A + R A GVD I+ P +P P E Sbjct: 339 LMRLQNALAV-----SGVAYLEALRWRGAALAAHVAA-TAGVDAIIAPVSPLVT-PSIAE 391 Query: 420 ENNSGSMGH--IYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + G+ G + + FT VN GLP++++P +P+G+QLIG+ F E T+ + Sbjct: 392 SDVGGAPGAEAVIQRITRFTRPVNYLGLPSLAIPTGFTATGLPVGMQLIGRSFDEATILT 451 Query: 476 VGQIIEKEAGY 486 +G ++ + Sbjct: 452 IGAAFQRATDF 462 >gi|86747346|ref|YP_483842.1| amidase [Rhodopseudomonas palustris HaA2] gi|86570374|gb|ABD04931.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodopseudomonas palustris HaA2] Length = 471 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 160/484 (33%), Positives = 242/484 (50%), Gaps = 39/484 (8%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++++E + +K +S+ E+ + + I ++NA++ + A A AAA+ +D + Sbjct: 8 LLSLTEIAQAIAAKTVSSREVTQACLDRIAAQQPRLNAFMSIEADSALAAADAADAELAR 67 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 GD+R L G+P+ KD + G H C S I ST Q+L D G V LG L Sbjct: 68 GDSRGVLHGVPLAHKDMYYETG-HVVTCGSKIRQDDVATTTSTALQRLKDAGTVRLGSLQ 126 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M EFA G + +++GPV +PW + D T GGSS GS AAVA L A++G+DTGGS Sbjct: 127 MSEFAYGPTGHNAHFGPVHNPW----NIDHIT-GGSSSGSGAAVAARLTFAALGSDTGGS 181 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA F G G+K T GR SR G + + SLD G + RT +D A+LL +AG D D Sbjct: 182 IRMPAHFCGVTGLKTTVGRVSRAGAMPLSQSLDTVGPLARTAQDCALLLGLMAGADPEDL 241 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TC+ +PDY A ++G +GIPK + +D L P + + + I+ L+ GA +VE+ Sbjct: 242 TCIAGELPDYLAATHAPMRGARIGIPKAFYVDDLDPEVARVLDETIATLRAEGASVVEVD 301 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP A ++ EA++ R+ M E R +G +V R+ Sbjct: 302 LPDQPQLTAACQLVLAVEAAAFHKRW----------------MIE--RPQDYGPQVLMRL 343 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 G V + YL A + R A VD +L P P A + E++ Sbjct: 344 QNGLGVPAIS-----YLEAMRWRGPALSAHLAAVAD-VDAVLAPVAPVPAPTIA--ESDV 395 Query: 424 GSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 GS + + FT +N GLP++++P +P+GLQLIG+PF E + +G Sbjct: 396 GSSLNAEAVIQRLTRFTRPINYLGLPSLAIPTGFSASGLPIGLQLIGRPFDEAMILRIGA 455 Query: 479 IIEK 482 ++ Sbjct: 456 AFQR 459 >gi|254504088|ref|ZP_05116239.1| Amidase, putative [Labrenzia alexandrii DFL-11] gi|222440159|gb|EEE46838.1| Amidase, putative [Labrenzia alexandrii DFL-11] Length = 468 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 155/489 (31%), Positives = 245/489 (50%), Gaps = 34/489 (6%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + + + +I+ ELV + I N A+I V A A A + Sbjct: 5 IAFQDIRSLKALMDAGEITPGELVAMFAGRISRYNGVSRAFITVTEDAAAAEAASLSRED 64 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + + GIP KD F K + T A S + ++ L + GA+ LGK N Sbjct: 65 LAKSP--IAGIPYACKDLFDVKDVLTTAGSRVFHDRIAAEDAYAVACLRNAGALNLGKTN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + EFA G++ E YG ++ + D+T GSS GS+AA+A L A++GTDTGGS Sbjct: 123 LHEFAYGATGENEVYGTCVNAY---DTTRLAG--GSSSGSAAAIAFGLVPAALGTDTGGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA G VG+KPT GR GI+ + +LD G++TRT+ D A +L +AG+D D Sbjct: 178 VRAPAVLNGLVGLKPTIGRVPTSGIVPYCWTLDHVGLMTRTIADCADILGLVAGHDPQDP 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 VNLP +Y AL Q I G+ +GIP + + P I +T ++ ++L GA++V I+ Sbjct: 238 ASVNLPGENYPEALGQDISGLRIGIPANFFFERSDPEILETLERVKAFLVAQGAELVPIT 297 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P ++ + EA S + + L+ G E+Y G++ + + Sbjct: 298 FPDMEHTRTVSLTVQLPEALSAHSAH------LQERG----ELY--------GKDFRAGL 339 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENN 422 +G +L+ HY++A++ ++ T F+ VD+ILTP TP A +G Sbjct: 340 ALGQCLLA-----EHYVKAKRFIERYRQQTTALFDD-VDLILTPATPEIAQKIGTVMVTR 393 Query: 423 SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G I N + FT NM G PA+++P L + +P+GLQL+G+ F E++LF V +I Sbjct: 394 DGVDEAIGNAITRFTTFFNMTGHPALTMPCGLHSEGLPIGLQLVGRYFDEKSLFRVAHVI 453 Query: 481 EKEAGYFRP 489 E+ + P Sbjct: 454 EQHDAFSIP 462 >gi|299138583|ref|ZP_07031761.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298599219|gb|EFI55379.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 523 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 155/496 (31%), Positives = 236/496 (47%), Gaps = 36/496 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + +SE+ R+ + +++ +L + + I+ N ++NA+I V+ +A A + D Sbjct: 38 ELTGLTLSEASKRIHAGSVTSTQLTQALLDRIKIYNPKVNAFITVMHAEALEQAAKLDAE 97 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R L GIPI +KD T G T A S + D P ++ V +L + GAV+LGK Sbjct: 98 AKARKFRSPLHGIPIVLKDNIDTAGTRTTAASEVFDDRIPEQDAEVVLRLKEAGAVILGK 157 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NM EFA G S+ ++Y+GPV +PW ++D P GSSGGS+AAV L ++GTDTG Sbjct: 158 ANMHEFASGGSSASTYFGPVRNPW-ALD----HIPAGSSGGSAAAVISDLAYGALGTDTG 212 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PA++ VG+KPTYG S GII SLD G +T+TV D+A++L + GYD+ Sbjct: 213 GSVRMPAAYCSIVGLKPTYGLVSIRGIIPLTYSLDHCGPMTKTVEDAAMMLNHMTGYDKR 272 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D V+ P DY ++ Q + + +GIP+ D L P K I L E Sbjct: 273 DVASVDHPKEDYVASMKQPVSSIRLGIPRAPFYDLLDPETLKAIDAAIEVLSKLTKSTTE 332 Query: 302 ISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 LP T A + EA L R + RY S+G Q ++ Sbjct: 333 CHLPSTA-GFSALALGGEREAYHLELFRRNAQRY-----------------SLGVRQSLQ 374 Query: 361 HRIMIGTYVLSSRCYDS--HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V S C + Y+ + L ++ +AF D++ PT + Sbjct: 375 TAQKTMDDVTSEPCSEKVVDYVTSNWQLILTRKSIDDAF-TNFDLVALPTMRILPRTIND 433 Query: 419 EENNSGSMGHIYNDVFT--VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N + + +V + N+ GLPAIS+P +P+GL + G F E Sbjct: 434 ALNREEEIKQLEPEVISNCTPFNIFGLPAISIPCGFSASGLPIGLMIAGPRFSE------ 487 Query: 477 GQIIEKEAGYFRPHKW 492 G+++ Y + +W Sbjct: 488 GKVLALANAYEQATQW 503 >gi|39933833|ref|NP_946109.1| putative amidase [Rhodopseudomonas palustris CGA009] gi|39647680|emb|CAE26200.1| putative amidase [Rhodopseudomonas palustris CGA009] Length = 470 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 155/487 (31%), Positives = 238/487 (48%), Gaps = 33/487 (6%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + ++E + + SK +S+ + + + I + ++NA++ + + A AAA+ +D + Sbjct: 8 LLTLTEVAEAIASKKLSSRDATQACLDRIARAQPKLNAFMAIEPESALAAADAADTALAK 67 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ + L G+P+ KD + G S I F ST Q+L D G V LG L M Sbjct: 68 GERKGPLHGVPLAHKDMYYETGFAVTCGSKIRRDFVATTTSTALQRLKDAGQVRLGTLQM 127 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA G + ++YG V +PW D T GGSS GS +AVA L A++G+DTGGSI Sbjct: 128 SEFAYGPTGHNAHYGAVRNPW----GLDHIT-GGSSSGSGSAVAARLTFAALGSDTGGSI 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F G G+K T G SR G + + SLD G + RT D A+L +AG D D T Sbjct: 183 RMPAHFCGVTGLKTTVGLVSRAGAMPLSHSLDTVGPLARTAEDCALLTGLMAGADPADPT 242 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + PVPDY A Q +QG+++GIPK + +D L P + + S L G +IVE+ L Sbjct: 243 ASHRPVPDYLAATRQPLQGLSIGIPKSFYVDDLDPEVARVLGDTKSALAREGVRIVEVEL 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A ++ L VE + R +G +V R+ Sbjct: 303 PDQRQLSAAAQLV------------------LAVEAAGFHGQWMRERPQDYGPQVLMRLQ 344 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NNS 423 + + YL A + R + +F A VD +L P +P A + + + NS Sbjct: 345 NALAIPAVT-----YLEAMRWRGVALAEFVAAVAG-VDAVLAPVSPVPAPTITESDVGNS 398 Query: 424 GSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + + FT +N GLP++++P +P+GLQLIG+PF E TL +G + Sbjct: 399 LNAEAVIQRLTRFTRPINYLGLPSLALPCGFSNAGLPIGLQLIGRPFDEATLLRIGAGWQ 458 Query: 482 KEAGYFR 488 + + R Sbjct: 459 RATDFHR 465 >gi|329940068|ref|ZP_08289350.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces griseoaurantiacus M045] gi|329300894|gb|EGG44790.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Streptomyces griseoaurantiacus M045] Length = 463 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 165/487 (33%), Positives = 254/487 (52%), Gaps = 46/487 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ A + +R + +S VELVDS + IE + AY+ V+A +AR AA ++++ Sbjct: 5 ELSLAAAARE---IRERRLSPVELVDSVLDRIEQVEPHIAAYVSVLADQARRAARDAERE 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G R L GIP+G+KD G+ T A S G R +STV L GA+++GK Sbjct: 62 AVQGSYRGPLHGIPVGLKDLIDVVGVSTTASSRTRAGHRAASDSTVAASLRAAGAILIGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + EFA G +I+P + + GGSSGGS+ AVA ++GTDTG Sbjct: 122 THTHEFAYG----------LITPQTNNAWDHRRIAGGSSGGSAVAVASGAATFALGTDTG 171 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VG+KPTYG R G+ S + SLD G I RTV D+A++L A+AGYD Sbjct: 172 GSIRVPATLNGVVGLKPTYGLVPRHGVTSLSWSLDHVGPIARTVDDTALVLTALAGYDPR 231 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D V +P Y + + G+ VG+P+ Y ++ + ++ I+ L+ GA++++ Sbjct: 232 DPASVAVPGVGYRPHPEPDLTGVRVGVPRNYYFAHVDAEVAAAVRRAIAQLEALGARLID 291 Query: 302 ISLPHTQYALPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + +P T+Y ++ ++ P + + A V R + + +LE E +G G Sbjct: 292 VDIPMTRYIQAVHWGLMVPEATAYHQATLRTVPELYRADVRILLEAGE---LMGAGD--- 345 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 YLRA++ RTL++ ++ E+ VDVI P P +A P G+E Sbjct: 346 ------------------YLRAQRARTLMRDEWARVLEE-VDVIAAPAVPMAAVPAGQET 386 Query: 420 ----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + S+ Y + + A N+ G+PA+SVP MP+G+QL+G+PF E TL Sbjct: 387 VTWPDGTVESVSDAYVRLSSPA-NITGVPALSVPVGQDAAGMPIGMQLLGRPFAERTLLL 445 Query: 476 VGQIIEK 482 VG E+ Sbjct: 446 VGHAYER 452 >gi|320012825|gb|ADW07675.1| Amidase [Streptomyces flavogriseus ATCC 33331] Length = 463 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 156/488 (31%), Positives = 250/488 (51%), Gaps = 58/488 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V E+ + +++S VELV+S + E S ++NAY V A +AR AA +++ I G Sbjct: 6 MTVEEAAAAVGGRELSPVELVESVLTRCEASEGRLNAYATVDADRARKAAARAEREIREG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D R L GIP G+KD T GI T A S +G P +STV +L GAV++GK Sbjct: 66 DYRGPLHGIPYGLKDMIDTAGIPTTAGSRAWEGRVPGQDSTVAARLARAGAVLVGKTQTH 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G ++ +PWR+ + T + GGS+ +A A F ++GTDTGGS+R Sbjct: 126 EFAYGLLTPQTF-----NPWRA-ERTAGGSSGGSAVAVAAGSALF----ALGTDTGGSVR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG+KPTYG +G+ + SLD G +TRT D+ ++L+A+ D Sbjct: 176 VPAALNGVVGLKPTYGLVPCVGVAPLSWSLDTVGTLTRTAGDAGLVLRAL-----TDQGH 230 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P + G+ VG+P + +++ P ++ +Q I L+ GA V + P Sbjct: 231 HGPGTPPRCAGTRGDLLGLRVGVPAAFFFEHVDPQVEVAVRQAIEDLRALGATTVPVVPP 290 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 T++ ++ + EA++ R GLR ++ +Y G++V+ + Sbjct: 291 LTEHMEATHWGLMAPEAAAVHER------GLR----EVPHLY--------GRDVRLLLEA 332 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G ++L+ + +LRA++ RTLI++ + F+ GVDVI P+ P +A P ++ N Sbjct: 333 GAHILA-----ADHLRAQRSRTLIRQAWLGVFD-GVDVIAAPSVPLTAVPRDQDTVN--- 383 Query: 426 MGHIYNDVFTVAV-----------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D +T +V N+ G P +S+P A MP+G+QL+ +PF E TL Sbjct: 384 ----WPDGYTESVTSAYVRLSAPGNVTGFPTLSLPVARDSDGMPIGMQLMARPFDESTLL 439 Query: 475 SVGQIIEK 482 G + E+ Sbjct: 440 RTGSVFER 447 >gi|317121336|ref|YP_004101339.1| amidase [Thermaerobacter marianensis DSM 12885] gi|315591316|gb|ADU50612.1| Amidase [Thermaerobacter marianensis DSM 12885] Length = 608 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 148/487 (30%), Positives = 244/487 (50%), Gaps = 46/487 (9%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN-------------GDARDL 71 E+ + ++ IE +NA++ V+A++A A A D+ ++ L Sbjct: 144 EVTRAVLEQIEALEPHLNAFVTVMAERALATARRRDEELVRWRRNGGGGGTSAAAGLGPL 203 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ +KD G+ T A S + G +TV ++L + GAV++GK EFA G+ Sbjct: 204 FGVPVALKDLIDVAGVPTTAGSRVRAGHVADRTATVVRRLEEAGAVIVGKTATHEFAFGA 263 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + +T ++GPV +PW ++D + SSGGS A V L ++GTDTGGSIR PA+ Sbjct: 264 TTDTPFHGPVHNPW-NLDHSAGG----SSGGSGAVVGAGLLPVALGTDTGGSIRIPAAAC 318 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 GTVG+KPTYGR SR G + + SLD G + +V D+A +L+ +AG D D V +P Sbjct: 319 GTVGLKPTYGRVSRHGTVPLSWSLDHTGPLAASVADAARVLEVLAGPDPLDPAAVPVPAQ 378 Query: 250 --VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + ++G+ VG+ ++ D + P +++ ++ + L+ GA++VEI P Sbjct: 379 GLLEAAAAGAAGDLRGLRVGVLADWARDRVHPEVEQAFRDALRQLEALGAELVEIGGPGG 438 Query: 308 Q-YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEVKHRIMI 365 A PA +++ + LA +G Y R G + EV+ R + Sbjct: 439 DGPAFPAAGVLT--LVNRVLALAEGGAY----------HAATLARQAGDYSHEVRIRFEL 486 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NNSG 424 G ++L+ YL A+++R + R T E V++ PT P A LG+ +G Sbjct: 487 GQFLLA-----RDYLLAQRLRAELARQATAVMEH-CHVLVAPTLPIPAPRLGQPVWEPAG 540 Query: 425 SMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + T N+ G PA+SVP A+ +P+G+Q++G+ F E T+ VG +E Sbjct: 541 ADPEPVPEAMIRLTAPFNVTGQPALSVPVAVGASGLPIGVQIVGRVFDEATVLRVGAALE 600 Query: 482 KEAGYFR 488 + G R Sbjct: 601 QVRGPLR 607 >gi|313678866|ref|YP_004056606.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma bovis PG45] gi|312950569|gb|ADR25164.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mycoplasma bovis PG45] Length = 437 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 136/414 (32%), Positives = 215/414 (51%), Gaps = 24/414 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 LE IKD +AT A S IL F+P+Y +T QKL D GA+ + K++ DE A+G Sbjct: 39 LENSVFTIKDNYATDDQKATASSMILKNFKPYYNATAVQKLLDAGAIPVAKVHCDELALG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + + S +G + +P+ D G S SAA + S+G+DTG S+R PAS+ Sbjct: 99 GTGKHSAFGLITNPF------DSSRLAGGSSSGSAATLTSNVSFSLGSDTGDSVRLPASY 152 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KP+YG SR G+ +FA SLD V D A+L + + G D D T +++ + Sbjct: 153 NGIVGFKPSYGAISRFGLFAFASSLDTVAYFAHNVNDIAVLSRVMFGKDPRDMTSLDVKI 212 Query: 251 PDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISLPHTQ 308 + +A Q I + V G+ K +D+ +++ I+ L K ++V I + Sbjct: 213 DNVIKAKPQKIGVLNVKGLEK---------FVDEEYKKLINKLSKSTTVELVSIDEKLYK 263 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 P Y IIS +EASSNLA +G+ +G R +G + E+ NTR+ GFG+ V+ R+ +G++ Sbjct: 264 AIKPVYEIISFSEASSNLANLNGIAFGSRKDGDNWEEIMTNTRADGFGEMVQLRLALGSF 323 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 L S+ + L+A+K+R LIK Q DV++ P A + +N S H Sbjct: 324 FLHSKNQEKMILKAQKVRRLIKEHIDSILNQ-YDVVIYPCAADYAPYIDDSKNRS----H 378 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 Y D N++G P++S+P + + + L + + + +E L S IE+ Sbjct: 379 GYMDYILTGANLSGNPSLSLP--WIKNDLFVNLSIDSKIYDDEKLLSYALWIEE 430 >gi|269986735|gb|EEZ93015.1| Amidase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 442 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 134/414 (32%), Positives = 207/414 (50%), Gaps = 30/414 (7%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D ++ G I +KD KG+ A S IL G+ P + +T ++L G ++GK NMDE Sbjct: 34 DEKEKNGKIISVKDNICVKGMPATASSKILQGYTPGFNATAIERLEKAGFSVIGKTNMDE 93 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F GS S P +P+ +++ GGSS GS+ A A SI TGGSI Sbjct: 94 FGFGSFGLNSE-NPAKNPF-----NEEYVAGGSSSGSAIATALIKEHVSIAESTGGSISA 147 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G G+ PTYG SR G+I +A SLD+ G + ++ + ++++ G D D T + Sbjct: 148 PASFCGVAGLTPTYGVISRYGLIDYASSLDKIGFMGKSADNIREVMESTIGSDPNDTTSL 207 Query: 247 NLPV----PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + + P+ +D + G+ GI + D L K + KI + Sbjct: 208 STAISNKKPNKLYVIDNLMAGINEGIKDRFE-DLLVKLSAKVY------------KIEHV 254 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE--GKDILEMYENTRSIGFGQEVK 360 + + +Y++PAYYI+S +EAS+NLA+Y G +YG +V+ + E + + R FG+E K Sbjct: 255 KMDYLEYSVPAYYILSMSEASTNLAKYQGFKYGFKVKDFSLNYNEFFMSARK-QFGKEAK 313 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R+++GT++ S +Y +A IR I + + G I+ PT P P E Sbjct: 314 RRVILGTFIRSKSIKQKYYEKALAIRHAIIGRMDKILKDG--FIIMPTMPIFT-PKISEV 370 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + + D+ TV N+ G P +S P EK MPLG Q+I F + +L Sbjct: 371 KDISPVEAYSMDMLTVPPNLCGFPHLSFP-YFYEKGMPLGAQVITDHFNDYSLL 423 >gi|40641222|emb|CAE47358.1| putative amidase [Pseudomonas putida] Length = 465 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 150/491 (30%), Positives = 237/491 (48%), Gaps = 50/491 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+++ E +R+ +S VE+ ++ + I+ + ++++Y V + A A E+++ Sbjct: 4 TELHYLEAYELSLLIRTGKLSPVEVTEAMLARIDRLDGELHSYARVTPELALEQAREAER 63 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G R L GIPI KD T G+ T A I F P ++TV +L + GAVMLG Sbjct: 64 ELMRGQCRSPLHGIPIAHKDLLWTAGVPTAAGMPIHSQFVPKEDATVVARLREAGAVMLG 123 Query: 121 KLNMDE--FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 KL M E FA+ + T P +PW + T G SS G A A LC AS+G+ Sbjct: 124 KLQMTEGAFAIHHPDCT----PPNNPWNAGHWT-----GASSSGCGVATAAGLCYASLGS 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIR P + G G+KPT+GR SR G A SLD G ITR+ RD+ +L IAG+ Sbjct: 175 DTGGSIRFPCAANGLTGLKPTWGRVSRYGAFELAASLDHIGPITRSARDALFMLSTIAGH 234 Query: 239 DECDAT-----CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D D T C+ +P +++S +G+ VGI + + D + P I + QQ ++ ++ Sbjct: 235 DPRDPTSLPSVCLEIP------GIEESFRGLRVGIDEAWLNDGVDPVIQQALQQVMAIIR 288 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 D G + + +P + SSN + GV+ V D R+ Sbjct: 289 DGGGLLQAVRVPDAR------------AVSSNWEVHCGVQTA--VAHADTYPQ----RAA 330 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 +G + R++ G LS Y L A++ + +A + +D++L P P +A Sbjct: 331 EYGPALS-RLIDGGRALSGMNYQRMLLDAQRFTGEV-----DALFKDLDLLLAPVQPYAA 384 Query: 414 FPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 P ++ N + FT N++G P +S+P E +P+G Q I E Sbjct: 385 -PTHEQLANLAQDPEANRRLIQFTSPFNVSGHPCLSLPCGFTEGGLPVGCQFIAGKGGEG 443 Query: 472 TLFSVGQIIEK 482 L G ++K Sbjct: 444 VLCRAGIALQK 454 >gi|295699742|ref|YP_003607635.1| amidase [Burkholderia sp. CCGE1002] gi|295438955|gb|ADG18124.1| Amidase [Burkholderia sp. CCGE1002] Length = 468 Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 150/495 (30%), Positives = 238/495 (48%), Gaps = 46/495 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L+ + + + +RS+ +S +E+ + ++ IE + + +Y V A A+E+++ Sbjct: 5 SDLHNLELHDLSLLIRSRKVSPIEVTQAQLKRIEALDGTLRSYARVTPDLALQQAKEAEE 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G R + GIP+ KD F T GI T I P +T Q + D GAVMLG Sbjct: 65 ELMRGQIRSPIHGIPLAYKDLFDTAGIITSGGMPIHGQRIPMQNATAVQMMHDAGAVMLG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL M E A ++ + ++PW + G SS G A A LC S+GTDT Sbjct: 125 KLQMTEGAFAINHPS--IPDAVNPWGA-----GHWAGASSTGCGVATAARLCYGSLGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G GIKPT+GR SR G A SLD G I R+ D+ ILL A+ G+D Sbjct: 178 GGSIRFPAAANGLTGIKPTWGRVSRFGAFELASSLDHVGPIARSASDALILLAAVTGHDT 237 Query: 241 CDATC---VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+T + L VP E ++ +G+ +G+ + + + + P I + + I+ + DAG Sbjct: 238 KDSTSLPHLGLNVPPIE----ENFKGLRIGVDESWISEGVDPVIQRQLETVIAMIIDAGG 293 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---RSIG 354 ++ + +P T+ + SSN + GV+ + +E+T R+ Sbjct: 294 LVISVKVPDTR------------DVSSNWELHCGVQTAV---------AHESTYPVRASE 332 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 +G + I G LS+ Y L AR+ + E VD+IL P P +A Sbjct: 333 YGPALSRLIDQGRE-LSAMDYQRILLEARRFNGAMDALLCE-----VDLILAPVQPYAAP 386 Query: 415 PLGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + +G + FT N++G PA++ P E MP+G Q IG+ + E T+ Sbjct: 387 TFEQLADLAGDPEANRRLIQFTAPFNVSGHPAMAFPIGFTENGMPIGGQFIGRKYGEVTV 446 Query: 474 FSVGQIIEKEAGYFR 488 G I+K + R Sbjct: 447 TRAGMAIQKVTDWHR 461 >gi|13507976|ref|NP_109925.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma pneumoniae M129] gi|2492833|sp|P75534|GATA_MYCPN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|1674296|gb|AAB96242.1| Glu-tRNA amidotransferase, subunit A [Mycoplasma pneumoniae M129] gi|301633219|gb|ADK86773.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma pneumoniae FH] Length = 478 Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 141/474 (29%), Positives = 232/474 (48%), Gaps = 40/474 (8%) Query: 27 VDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 ++ +Q I+ N + N ++ + A+A A + N L IP +KD A Sbjct: 19 INPLLQQIDGAINEHWSSNFLLKNTVEWAQAQAPK------NRSKSPLNNIPFVLKDNIA 72 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 TKGI T S L+ + P + +TV + L ++GA+++GK N+DEF +G + S +G V Sbjct: 73 TKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHH 132 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 PW + PGGSS GS+ AVA + SIGTDTG S+R+PAS VG KPTYG Sbjct: 133 PW-----NETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPASICNIVGFKPTYGLI 187 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-VPDYERALDQSIQ 262 SR G+ +APSLD GI R V D A++ I +D+ D + P + R+L +S Sbjct: 188 SRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDAGKFTRSLKESFN 247 Query: 263 GMTVGIPKEYRLDYLSPT-------IDKTWQQGISWLKDAGAKIVEISLPHTQYAL--PA 313 K+ ++ YL P + K W + G +++ P + P Sbjct: 248 -------KQIKIGYLKPLEEWFDIELSKKWNSLKERITLEGCELIPFHFPLELLEVIDPV 300 Query: 314 YYIISPAEASSNLARYDGVRYGLRV----EGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 Y +IS +EA S + G+ +G ++ + D + R FG+++K R +IG + Sbjct: 301 YKLISYSEAVSCYSNLTGIVFGQKLFEPNQASDFSKTITANRDRFFGEQLKRRFIIGAFG 360 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG-SMGH 428 + ++ +A+KIR ++ + F++ D I++P+ S F G S + Sbjct: 361 TDKNNFTKYFEKAQKIRRVMVDAYLNLFKEA-DFIVSPS--ASGFTKTIAAVQKGESFTN 417 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +D +A N AG P+I++P + +K +GL + F ++ L V +E+ Sbjct: 418 LVDDFLQLA-NFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEE 470 >gi|172038459|ref|YP_001804960.1| amidase [Cyanothece sp. ATCC 51142] gi|171699913|gb|ACB52894.1| amidase [Cyanothece sp. ATCC 51142] Length = 456 Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 154/496 (31%), Positives = 251/496 (50%), Gaps = 58/496 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++ L+ +A+S+ ++++K+ISA E++ + IE N +N + ++ +A A+ D Sbjct: 3 INSLDAIALSQ---KIKNKEISASEVITQFTDNIEQQNLTLNCFTAILKNQAVEEAKNID 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVM 118 ++I G+ L G+P +K+ F +GI T A S I P E +T +KL GA++ Sbjct: 60 QKIAKGETIGILAGVPFAVKNLFDIEGIITLAGSKINQKNTPAAENATAIKKLNAAGAIL 119 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G LNMDE+A G E S+YG +P + + GGS+ +A + F ++G+ Sbjct: 120 VGALNMDEYAYGFVTENSHYGATPNP-HDLSRISGGSSGGSAAAVAANLVPF----TLGS 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GS+R PA+ G +G+KPTYGR SR G + F+ SLD G TR+VRD A + + G Sbjct: 175 DTNGSVRVPAALCGVLGLKPTYGRLSRAGTVLFSNSLDHIGGFTRSVRDMAAIFDVLQGE 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG--ISWLK--D 294 D+ D C +L L+ I + + + EY +Q+G LK + Sbjct: 235 DKTDPVCTSLAPQLCFDKLNGDISRLKIAVAGEY------------FQKGAETEALKAVE 282 Query: 295 AGAKIVE----ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 AKI+ I++P A A YII+ E S+ + LR+ +D Sbjct: 283 TVAKILNIKETINIPEAHRARAAAYIITACEGSNFHIK------NLRLRPQD-------- 328 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 F + R + G ++ ++ Y++A++ R + + F Q VDVI+ PTTP Sbjct: 329 ----FDTATRDRFLAGAFI-----PNTWYIQAQRFRRWYRDQVKQIF-QKVDVIIAPTTP 378 Query: 411 TSAFPLGKEENN-SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A PLG+E N +G I ++ FT ++ GLP +S P L K+PLG+QLI P Sbjct: 379 CVATPLGQETMNINGEEILIRPNLGRFTQPLSFIGLPVLSFP-ILRPNKLPLGVQLIAAP 437 Query: 468 FREETLFSVGQIIEKE 483 ++E + V +E++ Sbjct: 438 YQELKILQVAAFLEEK 453 >gi|167907329|ref|ZP_02494534.1| amidase [Burkholderia pseudomallei NCTC 13177] Length = 489 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 142/480 (29%), Positives = 232/480 (48%), Gaps = 45/480 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++++ E +LR + +S VEL + + I + +NAYI V A+ A A A +++ I Sbjct: 7 YLSLLEVSSQLRQRRLSPVELTQAMLARIAQLDGHLNAYIRVTAESALADARRAEQEIAR 66 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY----ESTVTQKLWDNGAVMLG 120 G D L G+P+ +KD F KG+ T A G R H ++TV ++L D GAVMLG Sbjct: 67 GIDRGPLHGVPVAVKDIFDIKGVPTTAGM----GIRAHAVADEDATVIRRLRDAGAVMLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E A ++ P +P D D + PG SS GS+ AV LC A++ ++T Sbjct: 123 KLSMTEGAY-----AEHHAPFATPRNPWD--DAYWPGASSSGSAVAVCAGLCYAALASET 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G GIKPT+GR SR A +LD G++ R+ D+A++L+AIAG D Sbjct: 176 GGSIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVVARSAADAAVVLEAIAGADP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T PVPD+ L ++G+ +G+ + + +L + I+ L++ GA++V Sbjct: 236 DDPTASRSPVPDFSNGLTGDLKGVRLGVDEAWLGAHLDDATARATSAAIAALRELGAELV 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 ++LP + ++ P A ++ R E G + + E R++ G E+ Sbjct: 296 AVTLPDVNDMIWDWF---PVCAVQTALAHESTYPSRRNEYGPSLAALIEQGRALS-GMEL 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + +R + R A D++ P + + Sbjct: 352 Q---------------------RLLLRRRVFRGKLAAVFGAADIVALPVLAGGVPTIERM 390 Query: 420 EN-NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + + ++ FT NMAG+P++ +P + + +PL Q+IG F E +L Sbjct: 391 SNIDDELIADLHR--FTCPFNMAGVPSVVLPCGIAKNGLPLVFQMIGAHFSEASLVCAAH 448 >gi|320580983|gb|EFW95205.1| glutamyl-tRNA amidotransferase, A subunit, putative [Pichia angusta DL-1] Length = 495 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/325 (36%), Positives = 178/325 (54%), Gaps = 22/325 (6%) Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 L +IGTDTGGS+R P+ +T G KP+YGR SR G+I +A SLD GI+++ ++ Sbjct: 176 LVDYAIGTDTGGSVRLPSCYTSIFGFKPSYGRISRWGLIPYAQSLDTVGIMSKNIKLVRK 235 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 + + +D D T ++ Y+ +D I+ +GIP E D L + + W + + Sbjct: 236 VFSILDKHDTSDPTSISEEKRIYDDKVDSIIK---IGIPAEMSFDGLENDVKEKWSKLLK 292 Query: 291 WL-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYE 348 L K ++ ISLP +LPAYY + +EASSNLARYDG+RYG R LE + Sbjct: 293 RLQKLPNFELFLISLPSLSKSLPAYYTLVTSEASSNLARYDGIRYGYRTGEYTSLEPEFA 352 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---------- 398 TRS GFG EVK RI++G+Y LSS Y+SH++ A +R+ + ++F F+ Sbjct: 353 KTRSEGFGAEVKRRIILGSYSLSSYGYNSHFMNATNVRSKLIQEFNSIFKGPHMLNKHRN 412 Query: 399 -QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 G+D IL PT TS PL + + ND+ TV ++AGLP I++P Sbjct: 413 PNGIDFILCPTA-TSLPPLVSQYQKITPVESYMNDILTVPFSLAGLPVINIPLGRS---- 467 Query: 458 PLGLQLIGQPFREETLFSVGQIIEK 482 +G QL GQ + + + Q++++ Sbjct: 468 -IGFQLAGQLGHDYKVLKLAQMMDE 491 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 43/68 (63%) Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD T+ T S IL + +ESTV++ L + G+ ++GK NMDEF MG+S+ S Sbjct: 34 ALKDNIVTRDAPTTCSSKILANYVSPFESTVSRLLAEEGSQLVGKTNMDEFGMGNSSLNS 93 Query: 137 YYGPVISP 144 ++GP ++P Sbjct: 94 HFGPTLNP 101 >gi|310772394|dbj|BAJ23960.1| amidase [uncultured bacterium] Length = 467 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 238/495 (48%), Gaps = 38/495 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +++L F ++E + RS+ +S VE+ ++ IE + ++++Y+ V + A A++++ Sbjct: 3 LTDLPFATMTELGEAYRSRKLSPVEVTKLMLERIEKLDPRLHSYVTVTPEMALEQAKKAE 62 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G D + GIP+G+KD TKG+ T + IL + P + TV +KL D G++ML Sbjct: 63 ADLAAGKDHGPMHGIPVGLKDLCETKGVPTTWGTKILRDYVPDADGTVVRKLQDAGSIML 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL M E A + ++ V+ P PG SS GS +VA L +IGTD Sbjct: 123 GKLQMTEGAF-----SVHHPEVVEPVNPFHP--DHWPGVSSSGSGVSVAAGLAYGAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P+ G G+KPT+GR SR G+ + A SLD G +TR+ D+ + A+AG D Sbjct: 176 TGGSIRFPSGANGLTGLKPTWGRVSRHGVQALADSLDHLGPMTRSAADAGAMFMAMAGSD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T ++ PVPD +DQ ++G+ +G Y D + L D GAK+ Sbjct: 236 PNDPTSLDEPVPDCLAGIDQGVRGLRIGFDPRYIYDVCEKDTAQVIDDARKVLADLGAKL 295 Query: 300 VEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQ 357 VEIS+P TQ + E + ++ R + E G + ++ E R++G Sbjct: 296 VEISMPSRTQAMYKDWAKFCAVETAVAHEKFYPAR---KAEYGPVLADLIEQGRNLGV-L 351 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++ H Y + ++R L K +DV+L P P P Sbjct: 352 DLMH------------VYHDRLVFNGQLRKLFKE---------IDVLLVPVHPFGN-PSA 389 Query: 418 KEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + + +DV FT +M+G P I++P K +P+G QL+G+ E L Sbjct: 390 AQLDEIFKTPNGIDDVLRFTAPFDMSGSPTITIPGGFTAKGLPIGFQLVGRHLDEALLIR 449 Query: 476 VGQIIEKEAGYFRPH 490 + + R H Sbjct: 450 AAHAYQGATDWHRRH 464 >gi|67925167|ref|ZP_00518538.1| Amidase [Crocosphaera watsonii WH 8501] gi|67852993|gb|EAM48381.1| Amidase [Crocosphaera watsonii WH 8501] Length = 455 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 150/481 (31%), Positives = 237/481 (49%), Gaps = 40/481 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING- 66 A+S S+ R+ +++I+A+E+ ++ +E N ++N + ++ +A A+ D RI G Sbjct: 8 AISLSQ-RVNNQEITAIEVTGQFLDYVEQQNPRLNCFTTILKNQAFEQAKILDIRIAKGE 66 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMD 125 D L G+P +K+ F +GI T A S I P E +T +KL GA+++G LNMD Sbjct: 67 DTGVLTGVPFAVKNLFDIEGIITLAGSKINKENSPATEDATAIKKLKAAGAILVGALNMD 126 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E+A G E S+YG +P + + GGS+ +A++ F S+G+DT GSIR Sbjct: 127 EYAYGFVTENSHYGATPNP-HDLSRISGGSSGGSAAAVAASLVPF----SLGSDTNGSIR 181 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G G+KPTYGR SR G F+ SLD G TR+VRD A + + G D+ D C Sbjct: 182 VPAALCGVFGLKPTYGRLSRAGTFLFSNSLDHIGGFTRSVRDMAAIFDVLQGEDQDDPVC 241 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +LP L+ I G+T+ + DY + + + + IS+P Sbjct: 242 TSLPPQLCFDKLNDGIDGLTIAVAG----DYFQEGAETAALEAVETIAKLLNTKEIISIP 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A A YII+ E S+ + +R +R F + R + Sbjct: 298 EAHRARAAAYIITACEGSN--FHLENLR----------------SRPQDFDPATRDRFLA 339 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NN 422 G ++ ++ Y++A++ R + E F Q VDVI+ PTTP A LG+E+ N Sbjct: 340 GAFI-----PNTWYIQAQRFRRWYRDQVKEIF-QKVDVIIAPTTPCVATTLGQEKMMING 393 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + FT ++ GLP +S P L K+PLG+QLI P++E + V +E+ Sbjct: 394 EEILIRPNLGRFTQPLSFIGLPVVSFP-ILRANKLPLGVQLIAAPYQELKILQVAACLEE 452 Query: 483 E 483 + Sbjct: 453 K 453 >gi|298292829|ref|YP_003694768.1| amidase [Starkeya novella DSM 506] gi|296929340|gb|ADH90149.1| Amidase [Starkeya novella DSM 506] Length = 480 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 145/483 (30%), Positives = 244/483 (50%), Gaps = 52/483 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 S ++ ++V +++ E NS+ +YI + A++A A A ++ G + L GIP Sbjct: 18 SGEVRPEDVVAAFLVRAEARNSRDLSYISIGAEEALACAGRVEQ---AGTSGRLAGIPFS 74 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD F T + T A S + +RP ++ +L +GA++LGK N+ EF G + Sbjct: 75 CKDVFDTVTLPTTAGSRAMQDYRPARDAQALARLRVSGAILLGKNNLHEFCYGITGANPT 134 Query: 138 YGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G +P D+ GGSS GS+ AV ++GTDTGGS+R PAS G VG Sbjct: 135 FGTPANPH------DRHRLAGGSSSGSAVAVTNRTAMFALGTDTGGSVRVPASLCGLVGF 188 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPT G+ S G++ F SLD AGI+TR+ D+A + A+ E ER Sbjct: 189 KPTRGQISLKGVVPFCWSLDHAGILTRSCGDAADVFLAV---REAQQAVSGANADHSERG 245 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 S+ G+ +G+P+ LD + I + I+ + GA+IV++ +P + A Sbjct: 246 --NSLHGLRIGVPRGAYLDNAASDIAASVHHLIAECRRLGAQIVDVVMPDDTHVRTASLA 303 Query: 317 ISPAEA----SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 + EA +NL R R+ L +G++V+ ++ G ++L+ Sbjct: 304 VQLVEAFAWHRTNLQR----RFDL------------------YGEDVREGLLQGQFILA- 340 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYN 431 HY++A ++ + + + +E + VDV++TPTTP A PL +++ +G + I N Sbjct: 341 ----EHYVQALRLIAVKQAEVSELLKD-VDVLMTPTTPVVAPPLDQKQVTLAGVVVPIGN 395 Query: 432 DV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE--AGYF 487 + FT N+ G PA++VP +P+G+QLIG+ +R+ L ++G +E+ AG+ Sbjct: 396 ALSHFTCLFNLTGHPALTVPIGRNGDGLPMGMQLIGKHYRDMKLLAIGAALERVGLAGWI 455 Query: 488 RPH 490 P+ Sbjct: 456 EPN 458 >gi|257142011|ref|ZP_05590273.1| glutamyl-tRNA, putative [Burkholderia thailandensis E264] Length = 532 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 139/459 (30%), Positives = 225/459 (49%), Gaps = 41/459 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++++ + +LR + +S VEL + + I + +NAYI + A+ A A A +++ I Sbjct: 5 FEYLSLLDVSSQLRQRRLSPVELTQAILARIARLDPHLNAYIRITAESALADARRAEQEI 64 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L G+P+ +KD F KGI T A I ++TV ++L GAVMLGKL Sbjct: 65 ARGTDRGPLHGVPVAVKDIFDIKGIPTTAGMGIRANAVADEDATVVRRLRSAGAVMLGKL 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +M E A + + T + P +PW D + PG SS GS+ A+ LC A++ ++TGG Sbjct: 125 SMTEGAY-AEHRTPFAAPR-NPWH-----DAYWPGASSSGSAVAICAGLCYAALASETGG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ G GIKPT+GR SR A +LD G+I R+ D+ +L+AIAG D D Sbjct: 178 SIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVIARSAADATAVLEAIAGADPAD 237 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T LPVPD+ AL + ++G+ +G+ + L ++ I+ L++ GA+IV + Sbjct: 238 PTTSRLPVPDFPSALTRELKGVRLGVDDSWLGARLGDAAERAISTAIAVLRELGAEIVAV 297 Query: 303 SLPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +LP + ++ + + A ++ A Y + G + + E R++ G E++ Sbjct: 298 TLPDVSDMIWDWFPVCAVQTALAHEATYPSRKNEY---GASLAALIEQGRALS-GTELQ- 352 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRD-FTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R L++R F DV+ P A + E Sbjct: 353 ------------------------RLLLRRQVFRGKLAAVFDVVDIVALPVLADGVPTIE 388 Query: 421 NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKM 457 S + D+ FT NMAG+P+I +P + K++ Sbjct: 389 RMSKVDDDLIADLHRFTCPFNMAGIPSIVLPCGMSAKRI 427 >gi|167840313|ref|ZP_02466997.1| glutamyl-tRNA, putative [Burkholderia thailandensis MSMB43] Length = 476 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 149/491 (30%), Positives = 229/491 (46%), Gaps = 39/491 (7%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + + +LR +S VEL + + I N +NAY V A+ A A A +++ I Sbjct: 5 FEYLGLLDVSSQLRQGRLSPVELTQAMLARIAQLNPHLNAYNRVTAESALADARRAEQEI 64 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G D L GIP+ IKD F KG+ T A I ++TV ++L + GAVMLGKL Sbjct: 65 ARGIDRGPLHGIPVAIKDIFDMKGVPTTAGMSIHANAVADEDATVVRRLRNAGAVMLGKL 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +M E A + + T + P +PW D + PG SS GS+ A+ LC A++ ++TGG Sbjct: 125 SMTEGAY-AEHRTPFAAPR-NPWH-----DAYWPGASSSGSAVAICAGLCYAALASETGG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ G GIKPT+GR SR A +LD G+I R+ D+A +L AIAG D D Sbjct: 178 SIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVIARSAADAAAVLGAIAGTDPAD 237 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T LPVPD+ +AL + ++ + +G+ + L+ + I+ L++ GA+IV + Sbjct: 238 PTTSRLPVPDFSKALTRDLKDIRLGVDDSWLGARLNDATEHAISNAIAVLRELGAEIVAV 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +LP D +R V +E T ++ ++ Sbjct: 298 TLPDVS---------------------DMIRDWFPVCAVQTALAHEATYP---SRKDEYS 333 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRD-FTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + + R L+ R L++R+ F DV+ P A + E Sbjct: 334 ASLAALIEQGRALSGMALQ----RLLLRREVFRGKLAAVFDVVDIVALPVLAGGVPTIER 389 Query: 422 NSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S + D+ FT NMAG+P+I +P + +PL Q+IG F E L V Sbjct: 390 MSKVDDALIVDLHRFTCPFNMAGIPSIVLPCGMSANGLPLVFQMIGAHFSEARLACVADA 449 Query: 480 IEKEAGYFRPH 490 + + H Sbjct: 450 YQAATEWHLRH 460 >gi|126443834|ref|YP_001063326.1| amidase [Burkholderia pseudomallei 668] gi|237508311|ref|ZP_04521026.1| amidase [Burkholderia pseudomallei MSHR346] gi|126223325|gb|ABN86830.1| amidase [Burkholderia pseudomallei 668] gi|235000516|gb|EEP49940.1| amidase [Burkholderia pseudomallei MSHR346] Length = 542 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 142/480 (29%), Positives = 231/480 (48%), Gaps = 45/480 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++++ E +LR + +S VEL + + I + +NAYI V A+ A A A +++ I Sbjct: 60 YLSLLEVSSQLRQRRLSPVELTQAMLARIAQLDGHLNAYIRVTAESALADARRAEQEIAR 119 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY----ESTVTQKLWDNGAVMLG 120 G D L G+P+ +KD F KG+ T A G R H ++TV ++L D GAVMLG Sbjct: 120 GIDRGPLHGVPVAVKDIFDIKGVPTTAGM----GIRAHAVADEDATVIRRLRDAGAVMLG 175 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E A + P +P D D + PG SS GS+ AV LC A++ ++T Sbjct: 176 KLSMTEGAYAE-----HRAPFATPRNPWD--DAYWPGASSSGSAVAVCAGLCYAALASET 228 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G GIKPT+GR SR A +LD G++ R+ D+A++L+AIAG D Sbjct: 229 GGSIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVVARSAADAAVVLEAIAGADP 288 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T PVPD+ L ++G+ +G+ + + +L + I+ L++ GA++V Sbjct: 289 DDPTASRSPVPDFSNGLTGDLKGVRLGVDEAWLGAHLDDATARATSAAIAALRELGAELV 348 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 ++LP + ++ P A ++ R E G + + E R++ G E+ Sbjct: 349 AVTLPDVNDMIWDWF---PVCAVQTALAHESTYPSRRNEYGPSLAALIEQGRALS-GMEL 404 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + +R + R A D++ P + + Sbjct: 405 Q---------------------RLLLRRRVFRGKLAAVFGAADIVALPVLAGGVPTIERM 443 Query: 420 EN-NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + + ++ FT NMAG+P++ +P + + +PL Q+IG F E +L Sbjct: 444 SNIDDELIADLHR--FTCPFNMAGVPSVVLPCGIAKNGLPLVFQMIGAHFSEASLVCAAH 501 >gi|118473135|ref|YP_885483.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, subunit alpha [Mycobacterium smegmatis str. MC2 155] gi|118174422|gb|ABK75318.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycobacterium smegmatis str. MC2 155] Length = 466 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 148/487 (30%), Positives = 243/487 (49%), Gaps = 43/487 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R ++ +I+ V LV + I + ++ A+ V A +A A A+ES + A Sbjct: 17 IPQVRAQVDCGEITPVGLVRRALARISHVEDKIQAFAAVFADEALAVAQESAPQ-----A 71 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD + G T S ++ ++L D GA++LGK E+A Sbjct: 72 GPLWGIPVAVKDIYDVAGYRTGNGSLGAPEHLALRDAEAVRRLRDAGAIILGKATTHEYA 131 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G + P +PW S D+ PGGSSGG+ AA+A + AA +GTDTGGSIR PA Sbjct: 132 YGVTTP-----PTRNPW----SLDRI-PGGSSGGTGAAIAAGVVAAGLGTDTGGSIRIPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G KPT+G SR G+ + + +LD G + RTV D+ LL+ IAG+D D + Sbjct: 182 ALCGVTGHKPTFGLVSRSGVSALSSTLDHTGPLGRTVDDTVALLEVIAGHDPADPYSSSA 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PVPD+ D+ + G+T+G+ + Y D L+P + +++ I L+ GA I ++ Sbjct: 242 PVPDFRAEFDRGLAGLTIGVAEPYFCDRLTPDVAAAFEEAIHTLERGGATITSVTFTDVD 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 ++ EA++ + + G+ E F EV+ + +G Sbjct: 302 LCPRVVDVVCGVEAAA----WHAAQIGMAPE--------------KFSPEVRDALRLG-- 341 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--SM 426 + YL AR+ R + F+ G D++++PT +A P G + G ++ Sbjct: 342 ---ASYTGVEYLEARRARCAVIAGMNALFDSGPDLLISPTIAMTAPPYGSTHVDLGGRTV 398 Query: 427 GHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 G + + TV N+ G+PA++VPA +P+GLQL+G+P + T+ G+ E+ AG Sbjct: 399 GVLDGVNALTVPANVTGMPALTVPAGFGSDGLPIGLQLMGRPGADATVLGAGRAFERIAG 458 Query: 486 Y--FRPH 490 + F P+ Sbjct: 459 FVDFTPN 465 >gi|134278512|ref|ZP_01765226.1| amidase [Burkholderia pseudomallei 305] gi|134250296|gb|EBA50376.1| amidase [Burkholderia pseudomallei 305] Length = 559 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 142/480 (29%), Positives = 231/480 (48%), Gaps = 45/480 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++++ E +LR + +S VEL + + I + +NAYI V A+ A A A +++ I Sbjct: 77 YLSLLEVSSQLRQRRLSPVELTQAMLARIAQLDGHLNAYIRVTAESALADARRAEQEIAR 136 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY----ESTVTQKLWDNGAVMLG 120 G D L G+P+ +KD F KG+ T A G R H ++TV ++L D GAVMLG Sbjct: 137 GIDRGPLHGVPVAVKDIFDIKGVPTTAGM----GIRAHAVADEDATVIRRLRDAGAVMLG 192 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E A + P +P D D + PG SS GS+ AV LC A++ ++T Sbjct: 193 KLSMTEGAYAE-----HRAPFATPRNPWD--DAYWPGASSSGSAVAVCAGLCYAALASET 245 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G GIKPT+GR SR A +LD G++ R+ D+A++L+AIAG D Sbjct: 246 GGSIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVVARSAADAAVVLEAIAGADP 305 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T PVPD+ L ++G+ +G+ + + +L + I+ L++ GA++V Sbjct: 306 DDPTASRSPVPDFSNGLTGDLKGVRLGVDEAWLGAHLDDATARATSAAIAALRELGAELV 365 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 ++LP + ++ P A ++ R E G + + E R++ G E+ Sbjct: 366 AVTLPDVNDMIWDWF---PVCAVQTALAHESTYPSRRNEYGPSLAALIEQGRALS-GMEL 421 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + +R + R A D++ P + + Sbjct: 422 Q---------------------RLLLRRRVFRGKLAAVFGAADIVALPVLAGGVPTIERM 460 Query: 420 EN-NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + + ++ FT NMAG+P++ +P + + +PL Q+IG F E +L Sbjct: 461 SNIDDELIADLHR--FTCPFNMAGVPSVVLPCGIAKNGLPLVFQMIGAHFSEASLVCAAH 518 >gi|316932190|ref|YP_004107172.1| amidase [Rhodopseudomonas palustris DX-1] gi|315599904|gb|ADU42439.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 470 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 151/492 (30%), Positives = 242/492 (49%), Gaps = 33/492 (6%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S + ++E + + +K +S+ ++ + + I + ++NA++ + + A AAA+ +D Sbjct: 3 LSNPALLTLTEVAEAIAAKKLSSRDVTQACLDRIARAQPKLNAFMAIEPENALAAADAAD 62 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+ + L G+P+ KD + G S + F ST Q+L D G V L Sbjct: 63 AALAKGERKGPLHGVPLAHKDMYYETGFVVTCGSKVRRDFVATTTSTALQRLKDAGQVRL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L M EFA G + ++YG V +PW D T GGSS GS +AVA L A++G+D Sbjct: 123 GSLQMSEFAYGPTGHNAHYGAVRNPW----GLDHIT-GGSSSGSGSAVAARLTFAALGSD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA F G G+K T G SR G + + SLD G + RT +D A+L +AG D Sbjct: 178 TGGSIRMPAHFCGVTGLKTTVGLVSRAGAMPLSHSLDTVGPLARTAQDCALLTGLMAGAD 237 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + PVPDY A Q +QG+++GIPK + +D L + + + L G ++ Sbjct: 238 PADPTASHRPVPDYLAATKQPLQGISIGIPKSFYVDDLDAEVARVLDDTKAALVREGVRV 297 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 +E+ LP + A ++ L VE + R +G +V Sbjct: 298 IEVELPDQRQLSAAAQLV------------------LAVEAAGFHGQWMRERPQDYGPQV 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R+ + + YL A + R + +F A VD +L P +P A + + Sbjct: 340 LMRLQNALAIPAVT-----YLEAMRWRGVALAEFVAAVAG-VDAVLAPVSPVPAPTIAES 393 Query: 420 E-NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + NS + + + FT +N GLP++++P + +P+GLQLIG+PF E TL V Sbjct: 394 DVGNSLNAEAVIQRLTRFTRPINYLGLPSLALPCGFSKAGLPIGLQLIGRPFDEATLLRV 453 Query: 477 GQIIEKEAGYFR 488 G ++ + R Sbjct: 454 GAGWQRATDFHR 465 >gi|294632779|ref|ZP_06711338.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces sp. e14] gi|292830560|gb|EFF88910.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Streptomyces sp. e14] Length = 472 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 147/481 (30%), Positives = 242/481 (50%), Gaps = 39/481 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++++ + D +R+ +S VELVDS ++ +E + AY+ + A++AR AA ++ G Sbjct: 6 LSLAAASDAIRAGRLSPVELVDSVLERVEQVEPGLGAYVTITAERARRAARDAQDEAARG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L GIP+ +KD G+ T A S + R +STV +L GA+++GK + Sbjct: 66 LWRGPLHGIPMALKDVIDVGGLPTTASSRVRAHHRARTDSTVAARLAAAGAILVGKTHTH 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G + P R D + GGS+ ++ A F ++GTDTGGSIR Sbjct: 126 EFAYGLTT------PQTRNARDRDRIAGGSSGGSAVAVASGAATF----ALGTDTGGSIR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG+KPTYG R G+ + SLD G +TRTV D+A++L A+AG+D D Sbjct: 176 VPAALNGVVGLKPTYGLVPRHGVTPLSWSLDHVGPLTRTVEDAALVLTALAGHDPRDPAS 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 DY D + G+ VG+P+ Y D++ + + + L+ GA++VE+ +P Sbjct: 236 RATAPRDYRPGADPDLTGLRVGLPRTYYFDHVDAEVAAAVRHAVGHLEALGARLVEVDIP 295 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +Y + + EA++ Y ++ E+Y + R+++ Sbjct: 296 MARYVRATQWGLMVPEATA----YHEASL------REAPELY----------QADVRVLL 335 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--S 423 L S +LRA++ RTL++ ++ E+ DVI P P +A G+E Sbjct: 336 EAGALMS---AGDHLRAQRSRTLMRAEWARTLEEA-DVIAAPAVPMTAVRTGQETVTWPD 391 Query: 424 GSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G++ + + + N+ G+PA++VPA +P+GLQL+G+PF E L VG E Sbjct: 392 GTVEGVSDAYVRLSAPANITGVPALTVPAGHDRAGLPIGLQLLGRPFEEHVLLRVGHAYE 451 Query: 482 K 482 + Sbjct: 452 R 452 >gi|185179100|ref|ZP_02555548.2| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024127|ref|ZP_02569927.2| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518372|ref|ZP_02556347.2| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524273|ref|ZP_02557811.2| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867934|ref|ZP_03079932.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273422|ref|ZP_03205958.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554383|ref|YP_002284992.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550521|ref|ZP_03771470.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551457|ref|ZP_03772403.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184208994|gb|EDU06037.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019184|gb|EDU57224.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998030|gb|EDU67127.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659902|gb|EDX53282.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660411|gb|EDX53670.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249942|gb|EDY74722.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541884|gb|ACI60113.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379272|gb|EEH01637.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379675|gb|EEH02037.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 477 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 151/489 (30%), Positives = 240/489 (49%), Gaps = 41/489 (8%) Query: 13 RDRLRSKDISAVELVDSYIQ---AIENSNSQM-NAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ ++I +LV I I+N N+ + N Y ++A A D+ I N D Sbjct: 10 HEQIKKREIKIYDLVKKTIDHNLKIKNLNASLANNY-----EQALNQASFLDQEISNNDT 64 Query: 69 RD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIP +KD +TK I T S L+ ++P Y++TV L N A++L K N+DE Sbjct: 65 QIDYLFGIPYSLKDNISTKNIITTGGSLFLENYQPPYDATVKTLLDQNQAILLNKSNLDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F +G + S +G V++P +DST GGSS GS+ V + +I TDTG SIR+ Sbjct: 125 FGLGGTGTDSAFGIVVNP---LDSTR--VCGGSSSGSAVLVQQGVVPFAIATDTGDSIRR 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG KP+YG SR G+ FAPSLD GI T V D+ I+ AIA D D T Sbjct: 180 PASIMGIVGFKPSYGIISRYGVYPFAPSLDHVGIFTNNVLDTQIVFNAIAKRDFKDFT-- 237 Query: 247 NLPVPDYERALDQSIQGM-TVGIPKEYRLDYLSPTID---KTWQQGISWL-----KDAGA 297 +LD Q + T+ +Y++ P+ D +QQ ++ L KD Sbjct: 238 ---------SLDFKTQSLTTLKTNNKYKIGIFKPSFDLLEPKYQQELNNLINKLNKDHEV 288 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 V+ + + P Y +++ +EA S+ + + + +G +E K+ ++ R++ G Sbjct: 289 ISVDYDINLLKAISPVYKLVAFSEAYSSYSNFTNITFGKHDIEYKNYEDLIIKARTLYLG 348 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++K R MIG YV +++ A+K+RTLI + + F D+IL + + Sbjct: 349 TQLKQRFMIGAYVTQEAQFETLLTAAKKMRTLIVQKAKQLFT-NCDLILNLAVHDVSETI 407 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ NN ++ DV +A N G P+I +P + LGL L + L + Sbjct: 408 -EDVNNQKPTTNLVEDVMQIA-NFGGFPSIVIP-FIKTSLGNLGLNLWADYLNDNKLLNA 464 Query: 477 GQIIEKEAG 485 +I G Sbjct: 465 AYLISNLLG 473 >gi|154247171|ref|YP_001418129.1| amidase [Xanthobacter autotrophicus Py2] gi|154161256|gb|ABS68472.1| Amidase [Xanthobacter autotrophicus Py2] Length = 474 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 142/492 (28%), Positives = 230/492 (46%), Gaps = 36/492 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + V E D + +S+ L + +Q +E + NA +++ ++AR AA D Sbjct: 1 MSGFFTLGVVEMADAVADGSVSSEALAEEALQRLETLGPRYNAVMQIEPERAREAARAVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 GD L G+P+ KD G S I F P S+V ++L GA+ L Sbjct: 61 LARARGDKLGPLAGVPLAHKDLLYRAGRVATGGSLIRKDFVPDVTSSVLERLDAAGALDL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L++ EFA+ + +YG +SPW + + GGSS GS AAVA + ++G+D Sbjct: 121 GSLHLAEFALSPTGFNVHYGHGLSPWNT-----AYGAGGSSSGSGAAVAARMVPGALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P++ G G+KPT+G G + APSLD G +TRT RD+A ++ AIAG D Sbjct: 176 TGGSIRHPSAMCGVTGLKPTHGLVPLYGAMPLAPSLDTIGPLTRTARDAARMMTAIAGPD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + P D+E L ++G+T+ +P Y + +P I + LKDAGA++ Sbjct: 236 PRDGATLPAPRLDFEGGLKGDLKGLTIAVPSGYYRELATPEIAALMDDSRAVLKDAGAQL 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 +E S P ++ + VE + + R + +V Sbjct: 296 IETSPPDMALVNALMQVV------------------MLVEMSTLHRRWLTERPQDYSLQV 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL--- 416 + R++ G + ++R Y A +R + RD+ D++ PT P + + Sbjct: 338 RARMLPGLALPATR-----YAEALMMRASVTRDWLATTMGAADMVHMPTLPVAVPSIAET 392 Query: 417 --GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G E+ + +G + FT +N GLP++SVP +P QL+G+P+ + L Sbjct: 393 TAGPPEDIAAVVGRLA--AFTRGINYLGLPSLSVPCGFTANGLPAAFQLVGRPYADPVLL 450 Query: 475 SVGQIIEKEAGY 486 G ++ + Sbjct: 451 KAGDAYQRRTDF 462 >gi|126657391|ref|ZP_01728550.1| amidase [Cyanothece sp. CCY0110] gi|126621378|gb|EAZ92090.1| amidase [Cyanothece sp. CCY0110] Length = 457 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 150/496 (30%), Positives = 238/496 (47%), Gaps = 61/496 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 +N++ +++ ++ISA ++ +I IE N +N + ++ KA AE D +I Sbjct: 3 INYLDAIALSQKIKKQEISATNIISQFIHNIEQQNPILNCFTTILKNKAIEQAENLDYKI 62 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGK 121 G D L G+P +K+ F +G+ T A S I P + +T +KL GA+++G Sbjct: 63 TKGEDTGVLTGVPFAVKNLFDIEGVITLAGSKINQENAPATQDATAIKKLKAAGAILVGA 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDE+A G E S+YG +P ++ + GGS+ +A + F S+G+DT Sbjct: 123 LNMDEYAYGFVTENSHYGATPNP-HNLSRISGGSSGGSAAAVAANLVPF----SLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PA+ G G+KPTYGR SR G + F+ SLD G TR+VRD A + + G D+ Sbjct: 178 GSVRVPAALCGVFGLKPTYGRLSRTGTVLFSNSLDHIGGFTRSVRDMAAIFDILQGEDKN 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D C +LP L + I + + + Y +Q+G + ++VE Sbjct: 238 DPVCTSLPPQLCFDKLHEDISRLKIAVVGNY------------FQEGA---ETEALEVVE 282 Query: 302 -----------ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 IS+P A A YII+ E S+ + LR +D Sbjct: 283 TVTKLLNINKIISIPEAHRARAAAYIITACEGSNFHLQ------NLRSRPQD-------- 328 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 F + R + G ++ ++ YL+A++ R + E F Q VDVI+ PTTP Sbjct: 329 ----FDSATRDRFLAGAFI-----PNTWYLQAQRFRRWYRDQVKELF-QKVDVIIAPTTP 378 Query: 411 TSAFPLGKEE---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A LG+E+ N + FT ++ GLP +S P L + K+PLG+QLI P Sbjct: 379 CVATTLGQEKMMINGEEILIRPNLGRFTQPLSFIGLPVLSFP-ILRQNKLPLGVQLIAAP 437 Query: 468 FREETLFSVGQIIEKE 483 ++E + V +E++ Sbjct: 438 YQELKILQVATFLEEK 453 >gi|89899793|ref|YP_522264.1| amidase [Rhodoferax ferrireducens T118] gi|89344530|gb|ABD68733.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodoferax ferrireducens T118] Length = 470 Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 149/492 (30%), Positives = 226/492 (45%), Gaps = 39/492 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE-SDK 61 +L+ + V+ D + K SA E+V +Q +E+ +NA + + A A D Sbjct: 6 QLDLVGVA---DAIAQKRFSAQEIVAWSLQRLESIGRNLNAIFRIDHEDAMVRARSLDDL 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L G+P+ KD F G A S IL G + V +L G V LG Sbjct: 63 QSRRGTCGPLHGVPLAHKDLFGIVGRECHAGSLILRGQVAARNAWVIDELNAAGQVNLGS 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L+M EFA+ + ++YG +PW M SS GS AVA L S+GTDTG Sbjct: 123 LHMAEFAVSPTGFNAHYGHGRNPWSPMHVCGG-----SSSGSGIAVASRLVFGSLGTDTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G G+K T+ R S G++S + SLD G + ++ RD A LL I+ + Sbjct: 178 GSIRHPAAMCGVTGLKTTFRRVSVAGVVSLSSSLDCVGPLAQSARDCARLLTHISRPNPD 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D C + DYE LD ++G+ VG+P+ Y D L P + Q + L+ GA +V Sbjct: 238 DGLCTGVANQDYENGLDGDLRGLRVGVPEHYYRDNLDPEVAAALQTSLEVLRARGATLVT 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +++P +I EA++ + + +R + ++V+ Sbjct: 298 VAVPDMALINAMMQLIMSVEAAA------------------LHRKWIESRPQDYAEQVRL 339 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-----SAFPL 416 RI G + R Y+ A +R + ++ + D+I PT P +A Sbjct: 340 RIEAGFAYSAVR-----YVEALALRVRLTEEYLQTSFASCDLIHVPTIPVQTPTIAATTE 394 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G + ++G I + T VN GLPAISVPA + + MPL QLIG+PF E L Sbjct: 395 GDLQAILQTIGRITHA--TRGVNYLGLPAISVPAGISSEGMPLSFQLIGRPFDEALLLKT 452 Query: 477 GQIIEKEAGYFR 488 ++E + R Sbjct: 453 ADAFQRETDWHR 464 >gi|167724429|ref|ZP_02407665.1| amidase [Burkholderia pseudomallei DM98] Length = 489 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 141/480 (29%), Positives = 231/480 (48%), Gaps = 45/480 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++++ E +LR + +S VEL + + I + +NAYI V A+ A A A +++ I Sbjct: 7 YLSLLEVSSQLRQRRLSPVELTQAMLARIAQLDGHLNAYIRVTAESALADARRAEQEIAR 66 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY----ESTVTQKLWDNGAVMLG 120 G D L G+P+ +KD F KG+ T A G R H ++TV ++L D GAVMLG Sbjct: 67 GIDRGPLHGVPVAVKDIFDIKGVPTTAGM----GIRAHAVADEDATVIRRLRDAGAVMLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL+M E A + P +P D D + PG SS GS+ AV LC A++ ++T Sbjct: 123 KLSMTEGAF-----AEHRAPFATPRNPWD--DAYWPGASSSGSAVAVCAGLCYAALASET 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G GIKPT+GR SR A +LD G++ R+ D+A++L+AIAG D Sbjct: 176 GGSIRLPAAANGVTGIKPTWGRVSRHRTFELAATLDHVGVVARSAADAAVVLEAIAGADP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T PVPD+ L ++G+ +G+ + + +L + I+ L++ GA++V Sbjct: 236 DDPTASRSPVPDFSNGLTGDLKGVRLGVDEAWLGAHLDDATARATSAAIAALRELGAELV 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEV 359 ++LP + ++ P A ++ R E G + + E R++ G E+ Sbjct: 296 AVTLPDVNDMIWDWF---PVCAVQTALAHESTYPSRRNEYGPSLAALIEQGRALS-GMEL 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + +R + R A D++ P + + Sbjct: 352 Q---------------------RLLLRRRVFRGELAAVFGAADIVALPVLAGGVPTIERM 390 Query: 420 EN-NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + + ++ FT NMAG+P++ +P + + +PL Q+IG + E +L Sbjct: 391 SNIDDELIADLHR--FTCPFNMAGVPSVVLPCGIAKNGLPLVFQMIGAHYSEASLVCAAH 448 >gi|294155751|ref|YP_003560135.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma crocodyli MP145] gi|291600211|gb|ADE19707.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma crocodyli MP145] Length = 440 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 135/417 (32%), Positives = 215/417 (51%), Gaps = 23/417 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L IKD FAT TQA S +L+ F+P Y +TV +KL + GA + K++ DE A+G Sbjct: 41 LNNCIFTIKDVFATSFAPTQASSKLLENFKPSYNATVVEKLINTGAFPIAKVHSDELALG 100 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S +G V + DK GGSS GS + + A + +DTG S+R PAS+ Sbjct: 101 GTGTFSAFGLVKNKL-----DDKRLSGGSSSGSVSTFTNNISFA-LASDTGDSVRLPASY 154 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KP+YG SR G+ +++ SLD V D +I+ + G D D T VN+ + Sbjct: 155 NGCVGFKPSYGAISRYGMFAYSSSLDTVSYFAHNVNDISIISQCAYGQDSLDMTSVNVKI 214 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG--AKIVEISLPHTQ 308 + ++ + + + V ++L + K++ + +KD ++V+I + Sbjct: 215 DNIKKTKPKKVAFLDVT-------NHLKEYVKKSYLKAFEKIKDDNITVEMVKIDEDLLK 267 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 P Y I+S +EASSNLA G+ +G R EG+D E+ NTRS G+ V+ R+ +G+Y Sbjct: 268 SIKPVYDIVSYSEASSNLANLTGIGFGKREEGQDWEEIMTNTRSKNLGKMVQRRLSLGSY 327 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 L S +L+A+K+R +IK +T ++ D+I+ P + A + ++ NNS Sbjct: 328 YLYSENQKDVFLKAQKVRRVIKNYYTNLHDK-FDLIIYPASADIAPLIDEKYNNS----- 381 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 Y D N+ G P++S+P K MP L + + + +E L S IE+ G Sbjct: 382 -YMDYILTGANLVGNPSLSIPLG-SYKNMPYNLTIDSKIYNDEKLLSYSLHIEELLG 436 >gi|90422725|ref|YP_531095.1| amidase [Rhodopseudomonas palustris BisB18] gi|90104739|gb|ABD86776.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Rhodopseudomonas palustris BisB18] Length = 471 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 148/477 (31%), Positives = 234/477 (49%), Gaps = 33/477 (6%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 ++++E + + S+ E + + I ++NA++ + +A AAA+ +D + Sbjct: 7 TLLSLTEIAQAIAQRKFSSREATQACLNRIAALQPKLNAFVAIEPDEALAAADAADAALA 66 Query: 65 NGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+++ L G+P+ KD + +G S I F ST Q+L D G V LG L Sbjct: 67 RGESKGALHGVPLAHKDMYYDQGYVVTCGSKIRRDFVATTTSTALQRLKDAGTVRLGSLQ 126 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M EFA G + +++G V +PW + ++ T GGSS GS +AVA L A++G+DTGGS Sbjct: 127 MAEFAYGPTGHNAHFGAVHNPW----AIERIT-GGSSSGSGSAVAARLTYAALGSDTGGS 181 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA F G G+K T G SR G + + SLD G + RT D A+LL +AG D D Sbjct: 182 IRMPAHFCGVTGLKTTVGLISRAGAMPLSQSLDTVGPLARTAEDCALLLGLMAGADPADP 241 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 TC + VPDY A + G+ +G+P + +D L P + + ++ L+ GA IV++ Sbjct: 242 TCSSRDVPDYSAATKGKLSGVRIGLPSAFYVDDLDPEVARVLDDTVATLQREGADIVKVE 301 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP + A ++ EA+ G +E R +G +V R+ Sbjct: 302 LPDQRQLSAACQLVLAVEAA-------GFHTSWMIE-----------RPQDYGPQVLMRL 343 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NN 422 + + YL A + R + A GVD +L P P +A + + + N Sbjct: 344 QNALAIPAVT-----YLEAMRWRG-VALAAHLAATAGVDAVLAPVAPVAAPTIVESDVGN 397 Query: 423 SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 S + + FT +N GLPA+++P + +P+GLQLIG+PF E L +G Sbjct: 398 SLDAEAVIQRLTRFTRPINYLGLPALALPCGFTKALLPVGLQLIGKPFDEAMLLRIG 454 >gi|169598628|ref|XP_001792737.1| hypothetical protein SNOG_02120 [Phaeosphaeria nodorum SN15] gi|160704435|gb|EAT90332.2| hypothetical protein SNOG_02120 [Phaeosphaeria nodorum SN15] Length = 697 Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 151/449 (33%), Positives = 225/449 (50%), Gaps = 110/449 (24%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D +L G+P+ +KD TK + T A S IL F Y++TV + L + V++GK NM Sbjct: 48 NADWHNLRGMPVAVKDNICTKDLKTTAASGILKDFTSPYDATVVKLLREEDVVVVGKTNM 107 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTD--KFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 DEF MGS + S+ GPV M D + + GGSSGGS+ AVA C A++GTDTGG Sbjct: 108 DEFGMGSHSINSHTGPV-----KMQRYDGEEASAGGSSGGSALAVASSQCWAALGTDTGG 162 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA++TG ++ F PS G+++R Sbjct: 163 SVRLPAAYTG---------------VVGFKPSY---GLLSR------------------- 185 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 V Y +LD TVGI + SP + E Sbjct: 186 -----WGVIAYANSLD------TVGILAK------SP------------------RNAER 210 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE---MYENTRSIGFGQEV 359 +AL AYY+++PAEASSNLA+YDGVR+G R +G D ++ TR GFG EV Sbjct: 211 VFEKLNHALSAYYVLAPAEASSNLAKYDGVRFGSRADGIDGTPESVLFAKTRGQGFGAEV 270 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF----------------EQGVDV 403 + RI++G + LS++ D+++++A+K+R L+++DF F ++ VDV Sbjct: 271 QRRILLGAFSLSAQAIDNYFIQAQKVRRLVQQDFNNVFAKANPLGNEGTTSGGADEKVDV 330 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPL--- 459 +L PT PT A P + + NDVFTV ++AGLPAIS+P + E+++ L Sbjct: 331 LLCPTAPTLA-PALSDVKQQDPLKAYMNDVFTVPASLAGLPAISLPVHITKEEELVLHGD 389 Query: 460 -------GLQLIGQPFREETLFSVGQIIE 481 G+Q+IGQ ++ + + Q ++ Sbjct: 390 QDIRESAGMQIIGQYGDDKLVLNAAQSLQ 418 >gi|171920671|ref|ZP_02695792.2| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903407|gb|EDT49696.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 477 Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 151/489 (30%), Positives = 239/489 (48%), Gaps = 41/489 (8%) Query: 13 RDRLRSKDISAVELVDSYIQ---AIENSNSQM-NAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ ++I +LV I I+N N+ + N Y ++A A D+ I N D Sbjct: 10 HEQIKKREIKIYDLVKKTIDHNLKIKNLNASLANNY-----EQALNQASFLDQEISNNDT 64 Query: 69 RD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L GIP +KD +TK I T S L+ ++P Y++TV L N A++L K N+DE Sbjct: 65 QIDYLFGIPYSLKDNISTKNIITTGGSLFLENYQPPYDATVKTLLDQNQAILLNKSNLDE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F +G + S +G V++P +DST GGSS GS+ V + +I TDTG SIR+ Sbjct: 125 FGLGGTGTDSAFGIVVNP---LDSTR--VCGGSSSGSAVLVQQGVVPFAIATDTGDSIRR 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG KP+YG SR G+ FAPSLD GI T V D+ I+ AIA D D T Sbjct: 180 PASIMGIVGFKPSYGIISRYGVYPFAPSLDHVGIFTNNVLDTQIVFNAIAKRDFKDFT-- 237 Query: 247 NLPVPDYERALDQSIQGM-TVGIPKEYRLDYLSPTID---KTWQQGISWL-----KDAGA 297 +LD Q + T+ +Y++ P+ D +QQ ++ L KD Sbjct: 238 ---------SLDFKTQSLTTLKTNNKYKIGIFKPSFDLLEPKYQQELNNLINKLNKDHEV 288 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFG 356 V+ + + P Y +++ +EA S+ + + + +G +E K+ ++ R++ G Sbjct: 289 ISVDYDINLLKAISPVYKLVAFSEAYSSYSNFTNITFGKHDIEYKNYEDLIIKARTLYLG 348 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++K R MIG YV + + A+K+RTLI + + F D+IL + + Sbjct: 349 TQLKQRFMIGAYVTQEAQFKTLLTAAKKMRTLIVQKAKQLFT-NCDLILNLAVHDVSETI 407 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ NN ++ DV +A N G P+I +P + LGL L + L + Sbjct: 408 -EDVNNQKPTTNLVEDVMQIA-NFGGFPSIVIP-FIKTSLGNLGLNLWADYLNDNKLLNA 464 Query: 477 GQIIEKEAG 485 +I G Sbjct: 465 AYLISNLLG 473 >gi|299138580|ref|ZP_07031758.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298599216|gb|EFI55376.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 524 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 153/501 (30%), Positives = 240/501 (47%), Gaps = 44/501 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++E+ ++R+ +++ +L + ++ I +++ +I V+ KA A A D Sbjct: 36 TDLTALTLAEASAKIRAGTVTSTQLTHACLERIGIYGPKLDCFITVMRDKALAQAAMLDG 95 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G R L GIP+ +KD T G T A S + P ++ VT +L GAV++G Sbjct: 96 EQKAGKLRGPLHGIPVALKDNIDTAGTRTTAASGVFQDRVPMEDAPVTARLKAAGAVIIG 155 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EFAMG+ + S++GP +PW +T SS GS AA++ LC S+GTDT Sbjct: 156 KTNLHEFAMGA-GDVSFFGPARNPWALDHNTGG-----SSSGSGAAMSADLCYGSLGTDT 209 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P SF G VGIKPTYG GI SLD G ITRTV D+AI+L +AGYD+ Sbjct: 210 AGSIRNPGSFCGVVGIKPTYGLVPIRGIAPLVVSLDHCGPITRTVEDAAIMLNTLAGYDK 269 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V+ DY + Q I G+ +G+P D ++ + + Q I L + Sbjct: 270 LDITSVDHAKEDYVAGMKQPIAGLRLGVPVG-AFDGVNEEVGQIVQVAIDLLAKMTKGVK 328 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLP T + N A + G Y E + ++ + Q + Sbjct: 329 EVSLPSTNEV-----------SYQNFATF-GETYAYH-------EQFFKLQASRY-QPID 368 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 R + R D Y+R R +++R +AF D++L PT T+A L Sbjct: 369 RRRLEAEVEAHPRAED--YIRLRWELEMLRRTIDDAFAD-FDLVLLPTQKTTAPVLDDMI 425 Query: 420 ENNSGSMGHIYNDVFTVAV------------NMAGLPAISVPAALCEKKMPLGLQLIGQP 467 + N + N V T V N G+P++++P ++ +P+GL + G Sbjct: 426 KRNLQLLAGPTNAVMTGGVGSPGGGSNVGTYNAYGIPSLTIPCGFSKEGLPVGLMICGPH 485 Query: 468 FREETLFSVGQIIEKEAGYFR 488 F E +F++ EK + + Sbjct: 486 FSESRVFALANAYEKATSWHK 506 >gi|307151358|ref|YP_003886742.1| AtzE family amidohydrolase [Cyanothece sp. PCC 7822] gi|306981586|gb|ADN13467.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7822] Length = 460 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 159/476 (33%), Positives = 232/476 (48%), Gaps = 41/476 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLE 72 D +RS A ++ +Q I N +N + V A+ A A + D + G L Sbjct: 13 DSIRSGKTKATTIIKETLQQINKRNLTLNCFTTVTAETALIQARQIDSELEQGKPLGPLC 72 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P +K+ F G+ T A S I P E+T +L GA+++G LNMDE+A G Sbjct: 73 GVPFAVKNLFDIAGVVTLAGSKINADNPPAIREATAITRLKQAGAILVGALNMDEYAYGF 132 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 E S+YG +P +D K GGSSGGS+AAVA L S+G+DT GSIR PA+ Sbjct: 133 VTENSHYGATPNP---LDR--KRISGGSSGGSAAAVASHLVPISLGSDTNGSIRVPAALC 187 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G+KPTYGR SR G F SLD G R+VRD A + + G D D C P Sbjct: 188 GVYGLKPTYGRLSRAGAFLFCASLDHIGAFARSVRDLATIFDLLQGEDPKDPVCTQRPPQ 247 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 AL Q I+G+ + I +Y + S + + + + G K I++P T A Sbjct: 248 PCLPALYQGIEGLRIAIADDY---FSSGAEAEALEAVETVAQQLGVK-QRITIPETARAR 303 Query: 312 PAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A Y+I+ +E S+ +LA TR F + R + G + Sbjct: 304 AAAYVITASEGSNLHLANL-------------------KTRPQDFDTATRDRFLAGALIP 344 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHI 429 S S Y++A++ R + E F QG+D+IL PTTP A PLG+E+ +G + Sbjct: 345 S-----SWYIQAQRFRRWYRDRLREIF-QGIDIILAPTTPCVAPPLGQEKMVIAGEEILV 398 Query: 430 YNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ FT ++ GLP +S P +PLG+Q+I P++E +F V Q +E + Sbjct: 399 RPNLGRFTQPLSFVGLPVLSFPIK-SPNSLPLGVQIIAAPYQEVLIFRVAQFLETQ 453 >gi|148824584|ref|YP_001289338.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis F11] gi|148723111|gb|ABR07736.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis F11] Length = 475 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 239/497 (48%), Gaps = 55/497 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E D +R++ +++ E+ +S ++ IE + Q+ +Y V+ + A AAA +D I Sbjct: 17 ISKLELTEVADLIRTRQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAADSDI 76 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PIG+KD T T A + I FRP Y++TV +L GAV++GKL Sbjct: 77 ARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKL 136 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 M E A Y+ + +P D T G SS G A A LC SIG+DTGG Sbjct: 137 AMTEGAY-----LGYHPSLPTPVNPWDPTAWA--GVSSSGCGVATAAGLCFGSIGSDTGG 189 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P S G GIKPT+GR SR G++ A S D G ITR+ D+A+LL IAG D D Sbjct: 190 SIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSVIAGSDIHD 249 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +C PVPDY A D ++ + P + W Q S+ +D A + ++ Sbjct: 250 PSCSAEPVPDY--AADLALTRI--------------PRVGVDWSQTTSFDEDTTAMLADV 293 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + PA A +A + +R VE R+ +G ++ Sbjct: 294 VKTLDDIGWPVIDVKLPALA-PMVAAFGKMRA---VETAIAHADTYPARADEYGPIMRAM 349 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQ---GVDVILTPT----TPT-- 411 I G H L A + +TL +R +FT + + VD++L P+ +PT Sbjct: 350 IDAG-----------HRLAAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASPTLE 398 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + LG++ + + + T N++G PAI +PA + PLG+Q IG+ F E Sbjct: 399 TMRGLGQDPELTARLA-----MPTAPFNVSGNPAICLPAGTTARGTPLGVQFIGREFDEH 453 Query: 472 TLFSVGQIIEKEAGYFR 488 L G ++ GY R Sbjct: 454 LLVRAGHAFQQVTGYHR 470 >gi|91978745|ref|YP_571404.1| amidase [Rhodopseudomonas palustris BisB5] gi|91685201|gb|ABE41503.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 466 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 145/480 (30%), Positives = 225/480 (46%), Gaps = 35/480 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L++ +++E D R K + E+ + + I + + + Y V+A++A A+ SD Sbjct: 3 ADLHYKSITELSDLYRRKQLKPSEVTQASLDRIAKLDPRFHGYAVVLAERAMQQAKRSDD 62 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G R L G+PIG+KD T T + I F P + +T+ +L GAV LG Sbjct: 63 EIARGIWRGPLHGVPIGLKDLCYTTFAPTAGGTKIHATFVPSFNATIVDRLERGGAVSLG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL M E A +S+ P ++PW + D + SSG A AG LC +IG+DT Sbjct: 123 KLKMTEGAY-TSHHPDDAAP-LNPW----NVDYWVGSSSSGSGVATSAG-LCYGAIGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G GIKPT+GR SR G+ A SLD G + R+ D+A +L IAG D Sbjct: 176 GGSIRFPSATCGLTGIKPTWGRVSRYGVFPLADSLDHVGPMCRSAADAAAMLGVIAGADP 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T + PVP+Y +D ++G+ +GI + Y + P + ++ L D GA+I Sbjct: 236 NDPTTLQAPVPNYLAQIDDGVRGLRIGIDRSYAEQGIDPQVVAGLREAERTLADLGAEIR 295 Query: 301 EISLPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E+ LP + + + + E A ++LA Y +R +G ++ Sbjct: 296 EVRLPAYEKLVGHWIPMCSVETAEAHLATY-------------------PSRKSEYGPDL 336 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 I G + H+ R R L A + +D++L PT P L + Sbjct: 337 AQLIEQGHAMTGVEIAAIHHERLRFSGGL------AALFEDIDLLLAPTMPVPIPTLTRM 390 Query: 420 ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N + FT + +G P I++P + MPL QL+G E L GQ Sbjct: 391 GEYGADPNVLLNILRFTAPFDFSGSPTITMPMGMASDAMPLSFQLVGPHLSEHVLARAGQ 450 >gi|317401346|gb|EFV81983.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter xylosoxidans C54] Length = 257 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/228 (44%), Positives = 146/228 (64%), Gaps = 6/228 (2%) Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++ A Q ++G+ +G+P+EY L+P + Q ++ + GA V +SLP T+ A+P Sbjct: 12 FDAAGSQPLKGLRIGVPEEYFGAGLAPDVAAAVQAALTQFETLGAVRVPVSLPRTELAIP 71 Query: 313 AYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 AYY+I+PAEASSNLARYDGVRYG R + D+ EM +R+ GFG EVK RI+IGTYVLS Sbjct: 72 AYYVIAPAEASSNLARYDGVRYGHRAAQYGDLNEMISRSRAEGFGDEVKRRILIGTYVLS 131 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 YD++YL+A+++R +I +DF AF DVI+ P TPT A +G +N Sbjct: 132 HGYYDAYYLQAQRLRRMIAQDFQRAFAGQCDVIMGPVTPTVAKNIG--DNRDDPTADWLA 189 Query: 432 DVFTVAVNMAGLPAISVPAAL---CEKKMPLGLQLIGQPFREETLFSV 476 DV+T+ V++AGLPA+S+P K P+GLQ+IG F E L ++ Sbjct: 190 DVYTLGVSLAGLPAMSIPCGFGTGAGAKRPVGLQIIGNYFDEGRLLAI 237 >gi|12044951|ref|NP_072761.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma genitalium G37] gi|1351918|sp|P47345|GATA_MYCGE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A gi|3844687|gb|AAC71317.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Mycoplasma genitalium G37] gi|166078813|gb|ABY79431.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [synthetic Mycoplasma genitalium JCVI-1.0] Length = 477 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 142/484 (29%), Positives = 226/484 (46%), Gaps = 31/484 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK---ARAAAEESDKRIINGDARDL- 71 +RS +S ++D AI + + +NA IE+ + E K+I D + L Sbjct: 1 MRSNILSLRAILDKKPSAINDVLTSINAKIELNKSSNFLLKNTVEIYSKKINKSDEKILL 60 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 IP +KD ATK I T S L + P + +TV + L NGA+++GK NMDEF +G Sbjct: 61 NNIPYVLKDNIATKDIVTTGGSLFLKNYLPPFSATVFELLEMNGALLVGKANMDEFGLGG 120 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + S +G V P S GGSS GS+ AVA + SI TDTG SIR+PAS Sbjct: 121 TGSYSAFGVVHHPENS-----SLIAGGSSSGSAYAVAKDIVPFSIATDTGDSIRRPASIC 175 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG KPTYG SR G+ +APS+D GI + V D AI+ + +D+ D + P Sbjct: 176 NVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDIAIVSDVVIKHDKTDFSSQKSPDE 235 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPT-------IDKTWQQGISWLKDAGAKIV--EI 302 +Q + + + R YL P + K W L+ +++ + Sbjct: 236 ------NQFFNELAIPFTRSIRFGYLKPLEKLFNKHLQKKWNNLKKTLEQKNYQLIPLDF 289 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----RSIGFGQE 358 + + Y IIS +EA S + G+ +G +V + ++ T R G++ Sbjct: 290 DVELLKVIDSIYKIISYSEAVSCYSNLTGIVFGQKVFEPNSPSNFDQTITRNRDQFLGKQ 349 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 +K R +IG + + ++ ++ +A+KIR ++ +F F VD +L+P+ A + Sbjct: 350 LKRRFVIGAFATDEKNFEKYFEKAQKIRRVLVDNFLNLFSD-VDFVLSPSASCFASTIED 408 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + N I D F N AG P+I++P + K +GL + F ++ L + Sbjct: 409 IQANKPYTNII--DDFLQLANFAGSPSITIPWLVQTKDQTIGLSISANCFEDKKLLQIAY 466 Query: 479 IIEK 482 E+ Sbjct: 467 WFEQ 470 >gi|158422345|ref|YP_001523637.1| putative glutamyl-tRNA(Gln) amidotransferase [Azorhizobium caulinodans ORS 571] gi|158329234|dbj|BAF86719.1| putative glutamyl-tRNA(Gln) amidotransferase [Azorhizobium caulinodans ORS 571] Length = 473 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 145/492 (29%), Positives = 234/492 (47%), Gaps = 36/492 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ + + E+ D + I++ S + +E + +A + + A AA D Sbjct: 1 MSALHDLGLVETADAIAQGAITSEAATASALHRLEALGPRYHAVMLIDRDGALEAARAVD 60 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R D L G+P+ KD G S I F P ++V ++L GA+ L Sbjct: 61 LARARGEDIGPLGGVPLAHKDLLYRAGRVCTGGSLIRKDFVPDVTASVLERLDGAGALDL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L++ EFA+ + ++YG SPW ++D + GGSS GS AAVA L + ++G+D Sbjct: 121 GTLHLAEFALSPTGFNAHYGHGRSPW-NLD----YGSGGSSSGSGAAVAARLVSGALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P++ G G+KPT G G + APSLD G +TR+VRD+A +L IAG D Sbjct: 176 TGGSIRHPSAMCGVTGLKPTNGLVPLYGAMPMAPSLDTIGPLTRSVRDAARMLSVIAGPD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DAT + P DYE L ++G+T+ +P+ Y I + LK+AGAK+ Sbjct: 236 VRDATTLAAPERDYESGLSGDLKGLTIAVPQGYYRTTADGEILALMDDSLKVLKEAGAKV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE ++P ++ EA++ + + R +G +V Sbjct: 296 VETTVPDMALINALMQVVMTCEAAT------------------LHRQWLEERPGDYGAQV 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL--- 416 + RI+ G + ++R Y+ A +R + D+ G D++ PT P + + Sbjct: 338 RARILPGFALPATR-----YVEALMMRAKVAEDWLHRAMGGADMVHIPTLPIAVPSIAET 392 Query: 417 --GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G E+ + ++ + + T A+N GLP++SVP +P QL+G+PF E L Sbjct: 393 TQGAPEDVAVAIARVTH--CTRAINYLGLPSLSVPCGFTANGLPAAFQLVGRPFGEPVLL 450 Query: 475 SVGQIIEKEAGY 486 G ++ + Sbjct: 451 RAGDAYQRRTDF 462 >gi|240172691|ref|ZP_04751350.1| amidase amiD (acylamidase) [Mycobacterium kansasii ATCC 12478] Length = 475 Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 154/489 (31%), Positives = 235/489 (48%), Gaps = 63/489 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +R++ +S+ E+ D+ ++ IE ++ + ++ V+A A AA +D + G R L G+ Sbjct: 29 IRTRQVSSAEVTDATLRRIEKLDAGLKSHAFVMADSAVQAARTADAELARGLWRGALHGV 88 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PIG+KD T T A + I FR Y++TV +L GAV+ GKL M E A Sbjct: 89 PIGVKDLCYTADAPTGAGTVIRREFRSSYDATVVARLRAAGAVITGKLAMTEGAY----- 143 Query: 135 TSYYGPV---ISPWRSMDSTDKFTPGG-SSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +Y+ + ++PW D T G SS G + A A LC SIG+DTGGSIR P S Sbjct: 144 LAYHPDIPAPVNPW------DPATWAGVSSSGCAVATAAGLCFGSIGSDTGGSIRFPTSM 197 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G GIKPT+GR SR GI+ A S D G I R+ D+A+LL AIAG+D D PV Sbjct: 198 CGVTGIKPTWGRVSRYGIVELAASFDHVGPIARSAADAAVLLSAIAGFDVRDPMSSRTPV 257 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 PDY A D ++ + +L Q ++ L+ G +VE++LP Sbjct: 258 PDY--AADLALSRVPRAGVDWSQLSGFDDDTTSMMAQVVTTLEGIGWPVVEVTLPALDRM 315 Query: 311 LPAYYII-----SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + + + + A A + AR D YG + G + +N R+ Sbjct: 316 VDVFAKMRGVETAIAHAETYPARADA--YGPVLRG-----LLDNARN------------- 355 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT----TPTSA--FPLGKE 419 LS+ Y +R R+ ++R FT+ VD++L P+ +PT A LG + Sbjct: 356 ----LSAVEYQGLIIRRREFTEALQRVFTD-----VDLVLLPSAGLASPTVAGMRMLGVD 406 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S ++ T +N+ G PAI +PA + + PLG+Q +G+ F E+ L G Sbjct: 407 PVLSATLARP-----TAPLNVTGNPAICLPAGVTSRGTPLGVQFVGRHFAEQFLVQCGHA 461 Query: 480 IEKEAGYFR 488 ++ + R Sbjct: 462 FQQATTFHR 470 >gi|75909879|ref|YP_324175.1| amidase [Anabaena variabilis ATCC 29413] gi|75703604|gb|ABA23280.1| Amidase [Anabaena variabilis ATCC 29413] Length = 464 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 146/468 (31%), Positives = 221/468 (47%), Gaps = 39/468 (8%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIK 79 ++AVE+ + + I + ++N + V + A A A D+ I G D+ L G+P +K Sbjct: 16 VTAVEVTQAALARIAAQDVELNCFTAVTRETALADAARIDREIAAGNDSGLLAGVPFAVK 75 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 + F G+ T A + I P ++T KL GAV++G LNMDE+A G E S+Y Sbjct: 76 NLFDLVGLTTLAGAKINAENPPASRDATAVAKLKQAGAVLVGALNMDEYAYGFVTENSHY 135 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P + GGSSGGS+ AVA L ++G+DT GSIR PA+ G G KP Sbjct: 136 GVTRNPHDL-----QRVAGGSSGGSAVAVAAGLVPFTLGSDTNGSIRVPAALCGVFGFKP 190 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGR SR G+ F+ S D G R+V D A + + G D+ D C P L Sbjct: 191 TYGRLSRGGVTLFSSSFDHIGPFARSVGDIATIFDILQGGDDRDPICTQRPANPTLPQLH 250 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 Q I + + I DY + + DA ++LP A A ++I+ Sbjct: 251 QDISHIRIAIAD----DYFQKGATSAALAAVQQVADALNVTNYVTLPEAHRARAAAFVIT 306 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 +E +NL D +R TRS F + R + G + S + Sbjct: 307 ASEG-ANL-HLDKLR----------------TRSQDFDPATRDRFLAGALIPS-----NW 343 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIYNDVFT 435 Y++A++ R + E F Q VDVIL PTTP +A +G++ + + + +FT Sbjct: 344 YIQAQRFRQWYRDRIREVF-QNVDVILAPTTPITAPLIGQQTMILDGEEILVRPHLGLFT 402 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ GLP +SVP +PLG+QLI P+ E + V ++E + Sbjct: 403 QPLSFIGLPVLSVPIQR-PNTLPLGVQLIAAPYNEAFILQVAAVLEAQ 449 >gi|326317239|ref|YP_004234911.1| amidase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374075|gb|ADX46344.1| Amidase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 466 Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 138/492 (28%), Positives = 232/492 (47%), Gaps = 35/492 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+++ + E +++S++ S++E+ + ++ I ++++++Y ++A A A ++D Sbjct: 4 TELHYLELLEVGRQIQSRERSSLEVTQAMLERIGRIDAKLHSYATLMADHALRDARQADA 63 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I AR L G+PI +KD T+G+ + I +RP ++T ++L + GAV+LG Sbjct: 64 DIAANRARGPLHGVPIAVKDLLWTQGVPSAHGMTIHRDYRPQEDATAVRRLREAGAVLLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL E A + + P ++PW D PG SS GS A A LC AS+GTDT Sbjct: 124 KLQQTEGAF-ADHHPQVVAP-LNPW-----GDTLWPGASSSGSGVATAAGLCFASLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G G+KPT+ R SR G A SLD G I R+ D+A +L+ IAG D Sbjct: 177 GGSIRFPSAANGVTGLKPTWSRVSRHGAFELAASLDHIGPIARSAADAAAVLQVIAGADP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T PVPDY + + + G+ VGI + + LD Q + ++ G + Sbjct: 237 KDPTASQEPVPDYLAQMTRGLNGLRVGIDRAWTLDRADAPTRAVLQSVLELVEPLGGSLR 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ P + AL + + VE E +R+ +G + Sbjct: 297 EVDFPDAEQALQDWTPLCA------------------VETAVAHEATHPSRAAEYGPGLS 338 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 I +G + S+ Y +LR + R + F + VD++L P T + + Sbjct: 339 AVIEMGRQI-SATEYQKLWLRRAEFRGRVNAVFKD-----VDLLLIPATAVVGASM-ELM 391 Query: 421 NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 G+ +++D+ +T + G P I++P P+ Q + F E L G Sbjct: 392 TRFGTDAQLFSDMLRYTCPFDSTGHPTITLPGGRTPHGAPVAFQFVAPHFAEALLVRAGW 451 Query: 479 IIEKEAGYFRPH 490 ++ + R H Sbjct: 452 AWQRATDWHRLH 463 >gi|260905331|ref|ZP_05913653.1| amidase amiD (acylamidase) [Brevibacterium linens BL2] Length = 475 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 150/493 (30%), Positives = 238/493 (48%), Gaps = 38/493 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L F + E + +RS +S+ ++ I+ + + +++ ++ + A AAA++ D+ Sbjct: 11 SGLEFRELHEVSELIRSGRLSSRAATEAMFDRIDELDPHLLSFVTLMRESALAAADDLDE 70 Query: 62 RIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ GD L G+P+ IKD T T A + I F+P +++TV +L GAV+LG Sbjct: 71 RLARGDWLGPLHGVPLAIKDLAYTHDAPTGAGTTIHADFQPDFDATVVARLRAAGAVILG 130 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL + E A + + PV +PW + ++ SSG A AG LC S+G+DT Sbjct: 131 KLRLTEGAF-TGHHPDLPTPV-NPWEP----NTWSGVSSSGSGVATAAG-LCYGSLGSDT 183 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P+S G G+K T+GR SR GI APSLD G +TR+ RD+AI+L+AIAG+D Sbjct: 184 GGSIRLPSSANGVTGLKSTWGRVSRNGIFPLAPSLDHIGPMTRSARDAAIILEAIAGHDP 243 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T PVP Y R L + VG +E ++ ++ + I L D G +++ Sbjct: 244 NDPTSALEPVPRYSRQLRLETTPV-VGFDRELAAEHFDDVTNEMLESTIEVLLDLGWRVL 302 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRY-GLRVEGKDILEMYENTRSIGFGQEV 359 ++ P AEA+ G+ G+ E +RS +G ++ Sbjct: 303 DVRTPGF------------AEAAQEWTALCGIETAGVHAENY-------PSRSAEYGPDL 343 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 I IG + D H L + R R A +D++L P +A P + Sbjct: 344 AGLIEIGRGL---SAIDYHELLESR-RAFTGR--MRALMSDIDLLLLPGI-GAASPTISQ 396 Query: 420 ENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N GS ++ V T ++ G+P+I++PA E+ PL Q + F+E L + G Sbjct: 397 MENLGSDAELFAGVTIPTAPIDNCGMPSITLPAGFTERGTPLAAQFVAGDFKEGLLLAAG 456 Query: 478 QIIEKEAGYFRPH 490 ++ + R H Sbjct: 457 HTFQQATDFHRQH 469 >gi|271962130|ref|YP_003336326.1| amidase [Streptosporangium roseum DSM 43021] gi|270505305|gb|ACZ83583.1| Amidase [Streptosporangium roseum DSM 43021] Length = 461 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 142/484 (29%), Positives = 242/484 (50%), Gaps = 36/484 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L+F+ +SE L ++++S VEL + + + + +NA++ + +++ A A ++ Sbjct: 1 MSDLHFLGISELGPMLAARELSPVELCQALLARCASLDPLLNAFVSLPSERILADARVAE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + GD R L G+PI +KD +G T A S +L R ++ + +L GA++ Sbjct: 61 EELRRGDVRGPLHGVPIAVKDNIDVEGERTTAGSRVLADARATGDAVIVARLRAAGAIVF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ EFA G + T +YGP +PW ++ G S G SA AG L +IGTD Sbjct: 121 GKTNLPEFAYGPLD-TYHYGPTRNPW----DLHRYAGGSSMGSGSAVAAG-LVPGAIGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PA++ G VG+KPT+GR G++ A +LD AG + R+ D A+L A+A D Sbjct: 175 TTGSIRNPAAWCGVVGLKPTFGRVPTTGVVPLARTLDHAGPMARSAEDCAVLFDAVADRD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 A + L +S++G+ G+ + + + LS + L+D G ++ Sbjct: 235 PGRAGASHRKGAGRATPLRRSVRGLRAGVLRGFLWEPLSADTAAALTVALVALQDMGLEV 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V++ +P + A+ A I EAS+ R+ LR D++ ++ Sbjct: 295 VDVEVPAWKAAVEAGSTILACEASAEYRRF------LRERPGDLI------------PQI 336 Query: 360 KHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R+ G V + D+ LRA +++R + FT VDV++ P+ +A + Sbjct: 337 RERLEGGLAVPAPDYVDA--LRATQRLRAELDELFTR-----VDVLVLPSRERTA---PR 386 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E I ++ V +N GLPA+S+P +P+G+QL G + E TL ++ Sbjct: 387 MEATGRLTEPIGGPLYAVPLNGTGLPAVSIPCGFGSDGLPIGVQLAGPAWGEATLLALAH 446 Query: 479 IIEK 482 +K Sbjct: 447 AYQK 450 >gi|94268569|ref|ZP_01291223.1| Amidase [delta proteobacterium MLMS-1] gi|93451560|gb|EAT02371.1| Amidase [delta proteobacterium MLMS-1] Length = 223 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/217 (46%), Positives = 139/217 (64%), Gaps = 7/217 (3%) Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 L + K + I L++AGA++ EISLPHT+Y + AYYII+PAEASSNLARYDGVR+G Sbjct: 7 LDDEVKKLTEAAIKQLEEAGAELCEISLPHTEYGVAAYYIIAPAEASSNLARYDGVRFGH 66 Query: 337 RVEGKD-ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 R E D +L MYE +RS GFG EVK RI+IGTY LSS Y+++Y +A ++R LI D+ Sbjct: 67 RDEQADELLAMYERSRSQGFGMEVKRRIIIGTYALSSGYYEAYYRKASQVRALIIEDYRR 126 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 AF D+I++P TPT+A+PL + S + +D+ T+ N+AGLP +S+P Sbjct: 127 AFAD-CDLIVSPVTPTTAWPLN---SKSDPLSVYLSDILTIPANLAGLPGLSLPCGFSGA 182 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKE--AGYFRPH 490 +P+GLQL FRE+ L +E+ G RP Sbjct: 183 GLPVGLQLQANHFREDLLLRAAAELERRLAGGQRRPE 219 >gi|91787282|ref|YP_548234.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Polaromonas sp. JS666] gi|91696507|gb|ABE43336.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Polaromonas sp. JS666] Length = 467 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 152/487 (31%), Positives = 243/487 (49%), Gaps = 38/487 (7%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-R 62 L + ++ E+ + L S I++ LV++++ IE + +++AY+++ A++A AA DK R Sbjct: 6 LTYASIEETLEALTSGAINSEALVENHLSRIETFDVKLHAYVDLYAEEALQAARGLDKLR 65 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L G+ I +KD F KG A S L +TV +L GA++LGK Sbjct: 66 QAGLTVGPLHGVTIAVKDLFEIKGHAITAGSKSLPPRTSSITATVVDRLRAAGAIVLGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EFA G + G +PW D PGGSS GS+ AV+ + A++GTDTGG Sbjct: 126 HTVEFAFGGWGTNTSMG---TPWNPWDLAIHRVPGGSSSGSAVAVSAGMACAALGTDTGG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA G VG+K T+G SR G+I P+ D G ITRTVRD A LL +AG D D Sbjct: 183 SVRIPAGLCGLVGLKTTHGLISRYGLIDLCPTHDTVGPITRTVRDCATLLDVLAGPDPQD 242 Query: 243 ATCVNLPVPDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P + L++ ++GM V +PK R++ + P + K + + +S + G +V+ Sbjct: 243 VASRFSPSRSVSKGLEKDVRGMRVWTLPKAERVE-VDPEVLKAYDRSLSVFLELGMTLVD 301 Query: 302 ISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 LP TQ A ++S AE +NL ++E + + F + Sbjct: 302 KPLPQSLTQSMRIAGSLMS-AEGYANLG-----------------TLFERSE-LEFDPNI 342 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K RIM+G + +++ Y+ + R K EA + GVDV + PT +A P+ + Sbjct: 343 KRRIMLGRDIGAAQ-----YIDLLRDRESAKAAMLEAMD-GVDVCVFPTNAITAIPVSEV 396 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + + F VN+ L ++++PA L +P+ +Q+IG+PF E T+ Sbjct: 397 DELATPLSR-----FGRFVNLLDLCSVAIPAGLSANGLPVSIQVIGRPFAEPTILRAAFA 451 Query: 480 IEKEAGY 486 EK + Sbjct: 452 FEKATSW 458 >gi|186682262|ref|YP_001865458.1| amidase [Nostoc punctiforme PCC 73102] gi|186464714|gb|ACC80515.1| Amidase [Nostoc punctiforme PCC 73102] Length = 462 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 160/485 (32%), Positives = 234/485 (48%), Gaps = 63/485 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-D 67 ++++ +++S +++ LV Y+ +I+ N +NA+I V+ Q+A AA + D ING + Sbjct: 10 IAQASQQMQSGLLTSSMLVKHYLASIKKLNYTLNAFITVLEQQALEAAIQKDFERINGQN 69 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHIL-----DGFR---PHYESTVTQKLWDNGAVML 119 L GIPI +KD T + T S + G R P +S + QKL GAV+L Sbjct: 70 CGLLHGIPIVVKDNIDTAEVKTTVGSQLFCELTNQGLRDRIPLSDSVIVQKLKAAGAVIL 129 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ EFA S +YG + W S+ SS GS+ A+A LC A IGTD Sbjct: 130 GKTNLSEFAADLSGNNLFYGNTCNFWNHNHSSGG-----SSSGSATAIAARLCLAGIGTD 184 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PAS++G VG++PTY S GI S D G +T V D AILL A+ Sbjct: 185 TGGSIRVPASWSGVVGLRPTYRLLSNKGIFPRTRSFDTVGFLTNCVEDIAILLDAVLFPI 244 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + + P+P +I G+ +GI Y + P I K IS LK GA+I Sbjct: 245 STNLKQL-YPLPT-------NINGLKLGILNNYTFRGIEPEIAKAISNAISILKKLGAEI 296 Query: 300 VEISLPHTQYALPAYYIISPAEAS-SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + I+ P + I E + S +A Y E +L+ T FG + Sbjct: 297 ITINSP--------FLIEGFDEVTYSTIALY---------EFHQVLQAEYATNPNKFGAK 339 Query: 359 VKHRIMIGTYVLSSRCYDSH--YLRARKIR--TLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V+ + G + SH Y +A++ R ++R + Q VD++LTPTTP A Sbjct: 340 VQSDLSKGVKI-------SHHSYKKAKQKREECFLQR---QKLFQEVDILLTPTTPIVA- 388 Query: 415 PLGKEENNSGSMGHIY--NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 PL + IY N F + + GLPAIS+P + +P+GLQL+G + E Sbjct: 389 PLIDAD------AKIYRLNQRFMLPFSFLGLPAISLPCGQSTQGLPIGLQLVGNSYTEAL 442 Query: 473 LFSVG 477 + V Sbjct: 443 ILRVA 447 >gi|158423174|ref|YP_001524466.1| amidase [Azorhizobium caulinodans ORS 571] gi|158330063|dbj|BAF87548.1| amidase [Azorhizobium caulinodans ORS 571] Length = 470 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 153/491 (31%), Positives = 233/491 (47%), Gaps = 35/491 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+++ ++++E + ++ +S+ E + + I + +NA+I + +A AA+ +D Sbjct: 1 MTDIATLSLTEIAAAIANRQVSSREATQACLDRIADWQPHLNAFIALEPDEALKAADAAD 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+ A L G+P+ KD F G + I F P ST ++ G V L Sbjct: 61 AALAKGESAGPLHGVPLAHKDMFYEAGKVCTCGTEIRRSFVPDTSSTALARIKAAGTVRL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L+M EFA G + +YG +PW + PGGSS GS AAVA L A++G+D Sbjct: 121 GTLHMVEFAFGPTGHNVHYGDCHNPWNVAHA-----PGGSSSGSGAAVAARLTFAALGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA F G G+K T GR SR G + + SLD G +TRT D+A+LL +AG D Sbjct: 176 TGGSVRMPAHFCGVTGLKTTVGRVSRFGAMPLSHSLDTVGTLTRTAEDAALLLGLMAGAD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + +PDY A + G+T+GIP + +D +S I+ L GA + Sbjct: 236 PADPTTIGGDLPDYLAATKGGLAGLTIGIPDSFYVDDISSDTAAAMDATIATLVREGANV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V +SLP + A ++ L VE I + R +G +V Sbjct: 296 VRVSLPDQRQLSAAAQVL------------------LGVEASAIHLPWLRERPQDYGAQV 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ G + S Y L A + R A + VD +L P P + P E Sbjct: 338 RARVENG-HAFSGVAY----LEALRWRGPALAAHLAAVTE-VDAVLAPVCPAPS-PTLAE 390 Query: 420 ENNSGSMGH--IYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + GS + + FT VN GLPA+ VP A +P+G Q IG+PF E+ L Sbjct: 391 TDVGGSFNAEAVIQGITRFTRPVNYLGLPALVVPVARAASGLPVGFQFIGRPFAEDVLLR 450 Query: 476 VGQIIEKEAGY 486 +G ++ + Sbjct: 451 IGAGFQRATDF 461 >gi|269925578|ref|YP_003322201.1| Amidase [Thermobaculum terrenum ATCC BAA-798] gi|269789238|gb|ACZ41379.1| Amidase [Thermobaculum terrenum ATCC BAA-798] Length = 549 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 141/488 (28%), Positives = 242/488 (49%), Gaps = 45/488 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + +SE + +RS+ +S VELV S + I+ + ++NA+ V+ +A A+ +++ Sbjct: 90 ELLDLPLSELSEMVRSRKVSPVELVQSCLDNIDKYDKRLNAFQLVLGDEALQQAKRAEED 149 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ G+ + + GIPI +KD FA + T A S IL + P Y+S V +++ G +++GK Sbjct: 150 IVRGEYKGPIHGIPIAVKDLFALRDHPTTAGSRILQNWVPDYDSAVVERIKSAGGIVIGK 209 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 M EFA + YG ++PW + DK GGSS GS AVA + +G+DTG Sbjct: 210 TRMSEFAYSPGANNTIYGHTLNPW----NNDK-DAGGSSSGSGVAVATRMALVGLGSDTG 264 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VG+KPT+GR S G + + SLD G + R D +++ ++G D+ Sbjct: 265 GSIRIPAAHCGIVGLKPTFGRISLFGAVPLSWSLDHGGPLVRYTSDLPLVMALLSGQDKR 324 Query: 242 DA-TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID--KTWQQGISWLKDAGAK 298 D T P ++ ++ + + VG+ D T D W +G+ L++AG++ Sbjct: 325 DPRTSPASEWPYGDKVTNEDTRSLRVGVIGYTGSDDPIGTHDVVTCWMKGVRALEEAGSR 384 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E+ +P + L +G G VE + T + + Sbjct: 385 VEEVDIPDLE----------------RLWVLNGALIG--VEAATYHTHWLRTNKEAYSEF 426 Query: 359 VKHRIMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++R+M S+ Y + ++R ++ R L++ +++ DVI TP A Sbjct: 427 ARYRLM------SAFAYGPNIFMRIQQARALLRSKLNHLWDR-FDVITTPVVRHPA---- 475 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++G+ H ++T N G PA+SVP + + P+G+QL+ P+RE+ L Sbjct: 476 ---PDAGTPSHT---LYTGPFNFLGWPALSVPVGVSSEGTPVGMQLVSAPWREDLLLVCS 529 Query: 478 QIIEKEAG 485 ++E G Sbjct: 530 NVVEAALG 537 >gi|310772409|dbj|BAJ23972.1| amidase [uncultured bacterium] Length = 466 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 148/503 (29%), Positives = 236/503 (46%), Gaps = 55/503 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +++L F ++E + R++ +S VE+ + ++ IE + Q+++++ V + A A++++ Sbjct: 3 LTDLPFATMTELGEAYRARKLSPVEVTKAMLERIEKLDPQLHSFVTVTPEIALEQAKKAE 62 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G R + GIPIG+KD TKG+ T + IL + P + TV +KL + GA+ML Sbjct: 63 ADLAAGKDRGPMHGIPIGLKDLCETKGVATTWGTKILKDYVPTDDGTVVKKLQEAGAIML 122 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL M E A S + P I+P+ PG SS GS +VA L +IGTD Sbjct: 123 GKLQMTEGAF-SVHHPEVTAP-INPFHP-----DHWPGVSSSGSGVSVAAGLAYGAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P+ G G+KPT+GR SR G+ + A SLD G +TR+ D+ + A+AG D Sbjct: 176 TGGSIRFPSGANGLTGLKPTWGRVSRHGVQALADSLDHLGPMTRSAADAGAMFMAMAGSD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T ++ PVPD +DQ I+G+ VG+ + D + + L D GA + Sbjct: 236 SNDPTSLDEPVPDCLTGIDQGIRGLRVGLDPRFIYDVCAKDTAQVIDDARKVLADLGATV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE----------GKDILEMYEN 349 VEI++P + + A++ GV + E G + ++ E Sbjct: 296 VEIAMPSKTSVM-----------YKDWAKFCGVETAVAHEKYYPARKAEYGPVLADLIEL 344 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 R +G QE+ H Y + + ++R L +R + P Sbjct: 345 GRGLG-AQELMH------------IYHARLVFNGQLRKLSRRS---------TCCMVPVH 382 Query: 410 PTSAFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 P P + +DV FT +M+G PA+++P K +P+G QLIG Sbjct: 383 PFGNRP--RTARPDLQHAERIDDVLRFTAPFDMSGSPAMTLPGGFDAKGLPIGFQLIGAH 440 Query: 468 FREETLFSVGQIIEKEAGYFRPH 490 E L + + R H Sbjct: 441 LSEALLVRATHAYQGATDWHRRH 463 >gi|157363275|ref|YP_001470042.1| amidase [Thermotoga lettingae TMO] gi|157313879|gb|ABV32978.1| Amidase [Thermotoga lettingae TMO] Length = 447 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 160/497 (32%), Positives = 239/497 (48%), Gaps = 76/497 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + E + +R K+I E+++ I+ IE +N+++ A+I + A A++ D+ + Sbjct: 1 MFIYEIQKLIRKKEIKPSEVLEECIKNIE-ANAKLGAFITLTLDSAVKQAKKQDEMLQTA 59 Query: 67 DARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 D L GIPI +KD TKGI T S F PH ++ + +KL GA+ +GK N Sbjct: 60 DPEKLPPLFGIPIALKDLIFTKGIRTTGGSLFWKDFIPHEDAFIVKKLRKAGAIFIGKTN 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E A+G +N ++GP ++P DS+ GGSSGGS+ AVA +C A+IGTDTGGS Sbjct: 120 MHEIALGVTNNNPHFGPCLNP---HDSSR--ISGGSSGGSAVAVASGMCLAAIGTDTGGS 174 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR P++ G VG KPTYGR S GI+ A LD AG IT+ V D+ I+LK I GYD D Sbjct: 175 IRIPSALCGVVGFKPTYGRVSLRGIMPLAWHLDHAGPITKCVEDARIVLKVIEGYDSKDP 234 Query: 244 TCVNLP-----------------VPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTW 285 + + V D+ D+ I + KE +LD K Sbjct: 235 FSIRMRNSKIDGKKTTKIKVAKGVGDFVGKADERILKLVDEFSKELEKLDM------KIE 288 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE 345 + WLKD A A +++ EA++ + R+E K Sbjct: 289 MENTDWLKDVAA---------------ANGLMTQVEAAAF--------HRNRLEEK---- 321 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 F ++V+ R++ G Y AR +++ K F E F + D++L Sbjct: 322 ------PEWFSEDVRERLIQG-----KSASGVEYALARHTQSIAKHRFNEFF-KAYDLLL 369 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 PT P A PL E S FT + ++ GLPAI++P E +P+G+QL+ Sbjct: 370 LPTVPVIAPPLHGEGAVELSRKLTR---FTASFDITGLPAITIPYGKIE-GLPVGVQLVA 425 Query: 466 QPFREETLFSVGQIIEK 482 R+ L + +IIE+ Sbjct: 426 ASGRDAFLLKISRIIEQ 442 >gi|322433852|ref|YP_004216064.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321161579|gb|ADW67284.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 508 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 153/481 (31%), Positives = 228/481 (47%), Gaps = 37/481 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +M ++++ L++ +++V+L + + I+ N ++ AYI V+ Q A A A+ D Sbjct: 45 ELCYMTIAQAGAALKAGKVTSVQLTRACLDRIDTYNGKLAAYITVLHQGALAQAQRMDDE 104 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G R L GIPIG+KD T I T A S + P ++ V +L + GAV+LGK Sbjct: 105 MKAGKYRGPLHGIPIGLKDNIDTANIRTTAASAACESRIPTEDAPVATRLREAGAVLLGK 164 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NM EFA + TS+YG V +PW D T + PGGSS GS ++A LC ++GTDTG Sbjct: 165 TNMGEFA---ATLTSFYGIVRNPW---DLTRE--PGGSSSGSGVSIASGLCFGALGTDTG 216 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PA F G VG KPTYG II SLD G +TRTV D+AI+L AIAGYD Sbjct: 217 GSVRHPAHFCGVVGFKPTYGLVPIRNIIPLTFSLDHCGPLTRTVEDNAIMLNAIAGYDPA 276 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + + DY AL Q + G +G P D L P ++ I+ L I + Sbjct: 277 DISSRDHAKEDYVAALKQPVHGFKLGRPSA-GFDVLDPEVEALVNTAIALLVTLTKGIQD 335 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +++P LA + + K E +N + + Sbjct: 336 VNMP-----------------DPVLATWTSLGAETYAWHKPQFEATKNL------YQPAN 372 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R M+ S Y+ ++R F++ VD+++ PT A L Sbjct: 373 RAMLQALADKDGGSASSYVDLSWKLQALRRTIDSHFKE-VDLVVLPTMVNPAHKLDFVRP 431 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + H Y + + N G+PAISVP +P+GL + G F + + ++ E Sbjct: 432 PDYNW-HDYTN--SPEYNAYGIPAISVPCGFTRGGLPVGLTIAGPTFADGKVLALAHAYE 488 Query: 482 K 482 + Sbjct: 489 Q 489 >gi|326385406|ref|ZP_08207050.1| Amidase [Novosphingobium nitrogenifigens DSM 19370] gi|326210123|gb|EGD60896.1| Amidase [Novosphingobium nitrogenifigens DSM 19370] Length = 463 Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 142/493 (28%), Positives = 225/493 (45%), Gaps = 48/493 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F + E +L S+ +SAV+++D + I ++A+ + AR A +D R+ Sbjct: 8 FADMVEIAAKLASRSVSAVDVMDVLLARIARLERHLHAFAHLDPDAARRQARIADDRLAT 67 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G +EG+P+ +KD F T + T A + GFRP ++TV +L GA+ +GK M Sbjct: 68 GQGGPIEGVPVAVKDLFHTADMPTAAGMTVYSGFRPVRDATVVHRLRAAGAINIGKTQMT 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A + + PV +PW D PG SS GS AVA L AS+G+DTGGSIR Sbjct: 128 EGAF-ALHHPGVVAPV-NPW-----GDALWPGASSSGSGVAVAAGLAYASLGSDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P + G G+KP++GR SR G A SLD G + R+ RD A+L IAG+D D T Sbjct: 181 FPCAANGLTGLKPSWGRVSRHGAFELAGSLDHVGPMARSARDVALLYGLIAGHDPDDPTS 240 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + PV D ++G+ +G+ + + + L D GA I EI++P Sbjct: 241 WSGPVAPVVEGRD--LRGLVIGLDPGWNMAGCDREVVGAVDAMRDALADLGATIREIAVP 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A + +++ EA+ A E Y R+ +G + + I Sbjct: 299 DPACASRDWELLAGTEAALAHA-----------------ETYP-ARAADYGPALARLLDI 340 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G + + RA + R + A G+D++L P P +A L + Sbjct: 341 GHSASAME-----HQRALRDRMTLTGALDTAL-AGIDLLLAPVQPYAAPTLER------- 387 Query: 426 MGHIYND--------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +G + D FT N+ G P +++P + +P+G+QL+ RE+ L G Sbjct: 388 LGALAADPEANARLIAFTAPFNLGGQPTLALPGMPTDAGLPVGVQLVAARGREDVLLRAG 447 Query: 478 QIIEKEAGYFRPH 490 +++ + R H Sbjct: 448 IAVQEATDWHRAH 460 >gi|308372520|ref|ZP_07667395.1| putative amidase [Mycobacterium tuberculosis SUMu004] gi|308332962|gb|EFP21813.1| putative amidase [Mycobacterium tuberculosis SUMu004] Length = 479 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 239/497 (48%), Gaps = 55/497 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E D +R++ +++ E+ +S ++ IE + Q+ +Y V+ + A AAA +D I Sbjct: 21 ISKLELTEVADLIRTRQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAADADI 80 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PIG+KD T T A + I FRP Y++TV +L GAV++GKL Sbjct: 81 ARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKL 140 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 M E A Y+ + +P D T G SS G A A LC SIG+DTGG Sbjct: 141 AMTEGAY-----LGYHPSLPTPVNPWDPTAWA--GVSSSGCGVATAAGLCFGSIGSDTGG 193 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P S G GIKPT+GR SR G++ A S D G ITR+ D+A+LL IAG D D Sbjct: 194 SIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSVIAGSDIHD 253 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +C PVPDY A D ++ + P + W Q S+ +D A + ++ Sbjct: 254 PSCSAEPVPDY--AADLALTRI--------------PRVGVDWSQTTSFDEDTTAMLADV 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + PA A +A + +R VE R+ +G ++ Sbjct: 298 VKTLDDIGWPVIDVKLPALA-PMVAAFGKMRA---VETAIAHADTYPARADEYGPIMRAM 353 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQ---GVDVILTPT----TPT-- 411 I G H L A + +TL +R +FT + + VD++L P+ +PT Sbjct: 354 IDAG-----------HRLAAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASPTLE 402 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + LG++ + + + T N++G PAI +PA + PLG+Q IG+ F E Sbjct: 403 TMRGLGQDPELTARLA-----MPTAPFNVSGNPAICLPAGTTARGTPLGVQFIGREFDEH 457 Query: 472 TLFSVGQIIEKEAGYFR 488 L G ++ GY R Sbjct: 458 LLVRAGHAFQQVTGYHR 474 >gi|86606740|ref|YP_475503.1| amidase [Synechococcus sp. JA-3-3Ab] gi|86555282|gb|ABD00240.1| amidohydrolase, AtzE family [Synechococcus sp. JA-3-3Ab] Length = 466 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 153/481 (31%), Positives = 235/481 (48%), Gaps = 42/481 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING- 66 AVS +R +R +SA +V + ++ I + Q+NA+ V+ + A AAE+ D+++ G Sbjct: 13 AVSIARA-VRQGSVSAQAVVAACLERIRRRDPQLNAFTAVLEESALQAAEQVDRQVAQGI 71 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMD 125 L G+P +K+ F G+ T A S I P + +TV +L GA+++G LNMD Sbjct: 72 PVGPLAGVPFAVKNLFDVAGLTTLAGSAINRENPPAIQDATVVARLKQAGAILVGTLNMD 131 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E+A G E S+YGP +P S SSGGS+AAVAG L ++G+DT GSIR Sbjct: 132 EYAYGFVTENSHYGPTHNPHDLNRSAGG-----SSGGSAAAVAGGLVPLALGSDTNGSIR 186 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G G+KPTYGR SR G+ FAPS D G + R+V D A+ + G D D C Sbjct: 187 VPASLCGVYGLKPTYGRLSRAGVALFAPSFDHVGPLARSVADIALSFDVMQGPDPQDPVC 246 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV L Q I+G+ + + DY + + G+ + A + +P Sbjct: 247 TRRPVDPTFGQLGQGIEGLRIAVAD----DYFARGAELPILAGVEKVAQALGARQTVRIP 302 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 Q A A Y+I+ A EG ++ TR F + R + Sbjct: 303 EAQRARAAAYLITAA------------------EGANLHLPNLRTRPHDFDPATRDRFLA 344 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NN 422 G + + S L+A++ R ++ F++ +D+ + PTTP SA LG+E+ + Sbjct: 345 GALLPA-----SWILQAQRFRRWYRQQVQTIFQE-IDLFIAPTTPCSAPLLGQEKMVIDG 398 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSVGQIIE 481 + ++T ++ GLP +SVP L E +P G+QL+ P++E L +E Sbjct: 399 VEVLTRPNLGLYTQPLSFIGLPVLSVP--LRESGSLPFGVQLVAAPYQEAKLLRAAAYLE 456 Query: 482 K 482 K Sbjct: 457 K 457 >gi|319793067|ref|YP_004154707.1| amidase [Variovorax paradoxus EPS] gi|315595530|gb|ADU36596.1| Amidase [Variovorax paradoxus EPS] Length = 479 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 144/490 (29%), Positives = 226/490 (46%), Gaps = 35/490 (7%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+++ ++E R+R++ +S V ++ + + I + +++Y V+ A A AE + I Sbjct: 19 LHYLELTELAARIRTRQVSPVTVLRAQLHRISALDGALHSYALVMPDAAMAQAEAAQAEI 78 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L G+PI +KD T G T I P ++TV ++L + GAV+LGKL Sbjct: 79 AAGQYRGPLHGVPIAVKDLCFTAGFATAGGMAIHKHHIPFEDATVVRRLKEAGAVLLGKL 138 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + E A S + P I+P R+ D + PG SS GS A A LC S+G+DTGG Sbjct: 139 QLTEGAY------SDHHPSITPPRNPWHADHW-PGMSSSGSGVATAAGLCYGSLGSDTGG 191 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P + G GIKP++GR SR G+ A SLD G + R+ D+ +LL IAG DE D Sbjct: 192 SIRFPCAANGLTGIKPSWGRVSRHGVFELAASLDHIGPMARSALDAGVLLGVIAGSDEND 251 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 T PVPDY D ++G+ +GI + D + P + L+ GA+ V++ Sbjct: 252 PTAALDPVPDYLATADHGVRGLRIGIDAAWNNDGVDPATQAMLKDAAETLRALGARPVDL 311 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P A+ ++ + EA+ E +R +G + Sbjct: 312 RFPDVTEAVADWFPLCAVEAAVA------------------HEATYPSRKDAYGPVLASV 353 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I G V + L+ ++R++ R A +D++L P P ++ P Sbjct: 354 IEDGMSV------NGTALQKIRLRSMALRGRVSALFADIDLLLIPVHPFAS-PTVAAMQT 406 Query: 423 SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G + + + +T +M G P I++P E MPL QL+ E TL G Sbjct: 407 LGETPALVSALLRYTAPFDMTGHPTITLPGGFTEAGMPLAFQLVAAHMDEATLVRAGAAF 466 Query: 481 EKEAGYFRPH 490 + + R H Sbjct: 467 QAVTTWHRRH 476 >gi|15610511|ref|NP_217892.1| amidase AmiD [Mycobacterium tuberculosis H37Rv] gi|15842970|ref|NP_338007.1| amidase family protein [Mycobacterium tuberculosis CDC1551] gi|31794557|ref|NP_857050.1| amidase AmiD [Mycobacterium bovis AF2122/97] gi|121639301|ref|YP_979525.1| putative amidase amiD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663238|ref|YP_001284761.1| amidase AmiD [Mycobacterium tuberculosis H37Ra] gi|215405396|ref|ZP_03417577.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis 02_1987] gi|215413275|ref|ZP_03421964.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis 94_M4241A] gi|215428879|ref|ZP_03426798.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis T92] gi|215447698|ref|ZP_03434450.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis T85] gi|218755153|ref|ZP_03533949.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis GM 1503] gi|219559450|ref|ZP_03538526.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis T17] gi|224991798|ref|YP_002646487.1| putative amidase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800422|ref|YP_003033423.1| amidase amiD [Mycobacterium tuberculosis KZN 1435] gi|254233978|ref|ZP_04927303.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis C] gi|254365990|ref|ZP_04982035.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis str. Haarlem] gi|254552478|ref|ZP_05142925.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188431|ref|ZP_05765905.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis CPHL_A] gi|260202550|ref|ZP_05770041.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis T46] gi|289444969|ref|ZP_06434713.1| amidase amiD [Mycobacterium tuberculosis T46] gi|289449073|ref|ZP_06438817.1| amidase amiD [Mycobacterium tuberculosis CPHL_A] gi|289555653|ref|ZP_06444863.1| amidase amiD [Mycobacterium tuberculosis KZN 605] gi|289571612|ref|ZP_06451839.1| amidase amiD [Mycobacterium tuberculosis T17] gi|289747197|ref|ZP_06506575.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis 02_1987] gi|289752091|ref|ZP_06511469.1| amidase amiD [Mycobacterium tuberculosis T92] gi|289759534|ref|ZP_06518912.1| amidase amiD [Mycobacterium tuberculosis T85] gi|289763558|ref|ZP_06522936.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis GM 1503] gi|294995855|ref|ZP_06801546.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis 210] gi|297636036|ref|ZP_06953816.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis KZN 4207] gi|297733035|ref|ZP_06962153.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis KZN R506] gi|298526856|ref|ZP_07014265.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777717|ref|ZP_07416054.1| amidase amiD [Mycobacterium tuberculosis SUMu001] gi|306782443|ref|ZP_07420780.1| amidase amiD [Mycobacterium tuberculosis SUMu002] gi|306786262|ref|ZP_07424584.1| amidase amiD [Mycobacterium tuberculosis SUMu003] gi|306795159|ref|ZP_07433461.1| amidase amiD [Mycobacterium tuberculosis SUMu005] gi|306799350|ref|ZP_07437652.1| amidase amiD [Mycobacterium tuberculosis SUMu006] gi|306805196|ref|ZP_07441864.1| amidase amiD [Mycobacterium tuberculosis SUMu008] gi|306809383|ref|ZP_07446051.1| amidase amiD [Mycobacterium tuberculosis SUMu007] gi|306969488|ref|ZP_07482149.1| amidase amiD [Mycobacterium tuberculosis SUMu009] gi|306973834|ref|ZP_07486495.1| amidase amiD [Mycobacterium tuberculosis SUMu010] gi|307081546|ref|ZP_07490716.1| amidase amiD [Mycobacterium tuberculosis SUMu011] gi|307086153|ref|ZP_07495266.1| amidase amiD [Mycobacterium tuberculosis SUMu012] gi|313660367|ref|ZP_07817247.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis KZN V2475] gi|54036721|sp|P63497|AMI4_MYCBO RecName: Full=Putative amidase AmiD gi|54040686|sp|P63496|AMI4_MYCTU RecName: Full=Putative amidase AmiD gi|2661654|emb|CAA15760.1| PROBABLE AMIDASE AMID (ACYLAMIDASE) (ACYLASE) [Mycobacterium tuberculosis H37Rv] gi|13883309|gb|AAK47821.1| amidase family protein [Mycobacterium tuberculosis CDC1551] gi|31620153|emb|CAD95575.1| PROBABLE AMIDASE AMID (ACYLAMIDASE) (ACYLASE) [Mycobacterium bovis AF2122/97] gi|121494949|emb|CAL73435.1| Probable amidase amiD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599507|gb|EAY58611.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis C] gi|134151503|gb|EBA43548.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis str. Haarlem] gi|148507390|gb|ABQ75199.1| amidase AmiD [Mycobacterium tuberculosis H37Ra] gi|224774913|dbj|BAH27719.1| putative amidase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321925|gb|ACT26528.1| amidase amiD [Mycobacterium tuberculosis KZN 1435] gi|289417888|gb|EFD15128.1| amidase amiD [Mycobacterium tuberculosis T46] gi|289422031|gb|EFD19232.1| amidase amiD [Mycobacterium tuberculosis CPHL_A] gi|289440285|gb|EFD22778.1| amidase amiD [Mycobacterium tuberculosis KZN 605] gi|289545366|gb|EFD49014.1| amidase amiD [Mycobacterium tuberculosis T17] gi|289687725|gb|EFD55213.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis 02_1987] gi|289692678|gb|EFD60107.1| amidase amiD [Mycobacterium tuberculosis T92] gi|289711064|gb|EFD75080.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis GM 1503] gi|289715098|gb|EFD79110.1| amidase amiD [Mycobacterium tuberculosis T85] gi|298496650|gb|EFI31944.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308213949|gb|EFO73348.1| amidase amiD [Mycobacterium tuberculosis SUMu001] gi|308324895|gb|EFP13746.1| amidase amiD [Mycobacterium tuberculosis SUMu002] gi|308329126|gb|EFP17977.1| amidase amiD [Mycobacterium tuberculosis SUMu003] gi|308336577|gb|EFP25428.1| amidase amiD [Mycobacterium tuberculosis SUMu005] gi|308340452|gb|EFP29303.1| amidase amiD [Mycobacterium tuberculosis SUMu006] gi|308344318|gb|EFP33169.1| amidase amiD [Mycobacterium tuberculosis SUMu007] gi|308348250|gb|EFP37101.1| amidase amiD [Mycobacterium tuberculosis SUMu008] gi|308352975|gb|EFP41826.1| amidase amiD [Mycobacterium tuberculosis SUMu009] gi|308356817|gb|EFP45668.1| amidase amiD [Mycobacterium tuberculosis SUMu010] gi|308360767|gb|EFP49618.1| amidase amiD [Mycobacterium tuberculosis SUMu011] gi|308364385|gb|EFP53236.1| amidase amiD [Mycobacterium tuberculosis SUMu012] gi|323717959|gb|EGB27147.1| amidase amiD [Mycobacterium tuberculosis CDC1551A] gi|326905215|gb|EGE52148.1| amidase amiD [Mycobacterium tuberculosis W-148] gi|328460155|gb|AEB05578.1| amidase amiD [Mycobacterium tuberculosis KZN 4207] Length = 475 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 239/497 (48%), Gaps = 55/497 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E D +R++ +++ E+ +S ++ IE + Q+ +Y V+ + A AAA +D I Sbjct: 17 ISKLELTEVADLIRTRQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAADADI 76 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PIG+KD T T A + I FRP Y++TV +L GAV++GKL Sbjct: 77 ARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKL 136 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 M E A Y+ + +P D T G SS G A A LC SIG+DTGG Sbjct: 137 AMTEGAY-----LGYHPSLPTPVNPWDPTAWA--GVSSSGCGVATAAGLCFGSIGSDTGG 189 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P S G GIKPT+GR SR G++ A S D G ITR+ D+A+LL IAG D D Sbjct: 190 SIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSVIAGSDIHD 249 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +C PVPDY A D ++ + P + W Q S+ +D A + ++ Sbjct: 250 PSCSAEPVPDY--AADLALTRI--------------PRVGVDWSQTTSFDEDTTAMLADV 293 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + PA A +A + +R VE R+ +G ++ Sbjct: 294 VKTLDDIGWPVIDVKLPALA-PMVAAFGKMRA---VETAIAHADTYPARADEYGPIMRAM 349 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQ---GVDVILTPT----TPT-- 411 I G H L A + +TL +R +FT + + VD++L P+ +PT Sbjct: 350 IDAG-----------HRLAAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASPTLE 398 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + LG++ + + + T N++G PAI +PA + PLG+Q IG+ F E Sbjct: 399 TMRGLGQDPELTARLA-----MPTAPFNVSGNPAICLPAGTTARGTPLGVQFIGREFDEH 453 Query: 472 TLFSVGQIIEKEAGYFR 488 L G ++ GY R Sbjct: 454 LLVRAGHAFQQVTGYHR 470 >gi|189204448|ref|XP_001938559.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985658|gb|EDU51146.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 362 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 135/385 (35%), Positives = 205/385 (53%), Gaps = 68/385 (17%) Query: 124 MDEFAMGSSNETSYYGPV--ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 MDEF MGS + S++GPV + P S ++F+ GGSSGGS+ AVA A++GTDTG Sbjct: 1 MDEFGMGSHSTNSHFGPVKMVKP-----SGEEFSAGGSSGGSAVAVASDQVWAALGTDTG 55 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS TV +K + + + ++ SL A I + +R A L+ Sbjct: 56 GS--------NTVAVKHIFSALN-VEDVNDPTSLPTALRINKRIRGMAASLR-------- 98 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +G+P +Y +D L P + + W + + + G + Sbjct: 99 ------------------------IGVPLDYNIDTLQPEVKELWLRTLRGMWKYGHTLHP 134 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE---MYENTRSIGFGQE 358 I LP TQ AL AYY+++PAEASSNLA+YDGVR+G R G D ++ TR GFG E Sbjct: 135 IRLPTTQQALSAYYVLAPAEASSNLAKYDGVRFGSRAAGTDGTSDSVLFAKTRGQGFGPE 194 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---------------QGVDV 403 V+ RI++GT+ LS++ D+++++A+K+R L+++DF F VDV Sbjct: 195 VQRRILLGTFSLSAQAIDNYFIQAQKVRRLVQQDFNRVFRTQNPLFDTQDDWDESDKVDV 254 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQ 462 I+ PT P++A PL + E + NDVFTV ++AGLPA++VP + K+ P+GLQ Sbjct: 255 IICPTAPSTAPPLSEAETQDPIQSYT-NDVFTVPASLAGLPAMTVPIQDKDGKEDPIGLQ 313 Query: 463 LIGQPFREETLFSVGQIIEKEAGYF 487 +IGQ +E +F I++ Y+ Sbjct: 314 IIGQYGDDEQVFRAADTIDRVKQYY 338 >gi|299135469|ref|ZP_07028659.1| Amidase [Afipia sp. 1NLS2] gi|298589877|gb|EFI50082.1| Amidase [Afipia sp. 1NLS2] Length = 521 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 151/490 (30%), Positives = 222/490 (45%), Gaps = 38/490 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++SE+ R+R +S V+L +Y IE ++N +I + A A E D + G Sbjct: 54 MSISEAGKRMRDGSLSCVDLTKAYFHYIEMYQPKLNMFISQLKDMALKTAAERDAELKQG 113 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L GIPI +KD + G T S + ++T L + G V+LGK NM+ Sbjct: 114 KDRGPLHGIPILVKDLYDMAGTKTTVGSKAFVDRQSTEDATSVHHLLEAGVVVLGKTNMN 173 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G S +Y+G +PW + D+ G SSG +A AG + +DTGGSIR Sbjct: 174 EFAAGVSGTNAYFGDCHNPW----ALDRSPGGSSSGNGAALAAG-IGFGGTSSDTGGSIR 228 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-T 244 PAS+ G GI+PTYG S G+ A SLD AG + R V D +LL A+AG+D D + Sbjct: 229 VPASWCGIAGIRPTYGLVSLHGLFPRAYSLDCAGPLARNVFDLGLLLDAMAGFDPLDKHS 288 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + Y + + ++GMT K Y + + + LK GAKIVE+ Sbjct: 289 ALAQRTSSYTKGIKDGVKGMTFATVKNYTYKDVDKPVADAVAKAAEKLKSLGAKIVEVE- 347 Query: 305 PHTQYALPAYYIISPAEASSNLAR-YDGVRYGLRVEGKDIL-EMYENTRSIG--FGQEVK 360 I P E + + + + L E IL + Y NT + +G V Sbjct: 348 ------------IKPLEGQLDYNKLFTNI---LLYEFNQILGDKYRNTPNAADLYGPIVT 392 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + I G S+ Y + R I + + F VD +LTP PT+A PL K Sbjct: 393 NNIAAG-----SKVSKEDYEKTMNERPAIIAEVKKVFNH-VDALLTPALPTTA-PLLKAS 445 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G FT+ + LP+ VP + +P+GLQ++G F E L + Sbjct: 446 AQDYGRGR----QFTIPFSYTALPSAVVPCGFDPQGLPIGLQIVGDHFSEAALLRMAYAY 501 Query: 481 EKEAGYFRPH 490 E+ + + H Sbjct: 502 EQATDFHKKH 511 >gi|317407818|gb|EFV87744.1| amidase [Achromobacter xylosoxidans C54] Length = 464 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 148/486 (30%), Positives = 239/486 (49%), Gaps = 42/486 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++SE LRS + + +LV + + I +++++A+ ++ + A A D R Sbjct: 5 LSISEMARALRSGAVKSEQLVRAALDRINACDTRIHAFTQLNREYALNEARACDLRRREQ 64 Query: 67 DARDL---EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 A +L GIP+ +KD + G T S + ++ Q+L D GA++LGKL Sbjct: 65 GADNLPVLHGIPVAVKDIYDLAGQPTTCHSKLRLDHIAEQDAGSVQRLKDAGAIVLGKLA 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA+G + + P +PW + + PGGSS GS AAVA ++G+ TGGS Sbjct: 125 THEFALGGPSFDLPFPPARNPW-----SLRHIPGGSSSGSGAAVAAGYTRLALGSCTGGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA++ G VG+KPTYGR SR G+ A +LD G + R+V D+AI L+ +AG+D D Sbjct: 180 IRIPAAWCGVVGLKPTYGRVSRHGVFPLAWTLDHCGPLARSVEDTAIGLQVLAGHDPRDP 239 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDAGAKIV 300 + PV DY LD ++G+ +G+ + R +L+ T + + + WL A +V Sbjct: 240 GSADEPVDDYCSMLDIGVRGLRIGVARS-RFQHLAQTSAEFLRGFDRASQWLAQEQANMV 298 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ LP + + +I AE+ + + KD+ +R + +G Sbjct: 299 EVCLPDDEECVAVGRVILAAESFA-------------LHAKDL-----RSRPLDYGHITL 340 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G V S YL A ++R + FE+ DV+LT T +A Sbjct: 341 SRLVQGAAVSS-----EDYLNALRLRRELAARMDTVFER-CDVVLTAVTLDTAPAFTSAG 394 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G Y A N+ G PAISVP L + +P+ +Q++G+ F E + V + I Sbjct: 395 TAHGWPAQAY------AFNVTGHPAISVPIGLSSQGLPMAVQIVGRYFDEALVLRVARAI 448 Query: 481 EKEAGY 486 EK +G+ Sbjct: 449 EKLSGW 454 >gi|256378801|ref|YP_003102461.1| amidase [Actinosynnema mirum DSM 43827] gi|255923104|gb|ACU38615.1| Amidase [Actinosynnema mirum DSM 43827] Length = 516 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 146/473 (30%), Positives = 234/473 (49%), Gaps = 52/473 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++E+ + ++ +S VELVD+ ++ IE + +NAY EV+A +ARAAA +++ I G Sbjct: 81 LTLAEAAHEIGARRLSPVELVDAVLRRIERV-ADLNAYAEVLADRARAAARVAERDIAAG 139 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +R L G+P +KD G T A S + DG R +S V ++L GAV++GK + Sbjct: 140 RSRGPLHGVPFALKDLVDVAGTRTGAGSRVRDGHRASADSAVAERLAGAGAVLVGKTHTH 199 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G P + R D + GGS+ +A A F ++G DTGGSIR Sbjct: 200 EFAYG------LVTPQTANARRRDRVAGGSSGGSAVAVAAGAATF----ALGADTGGSIR 249 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG+KPTY R G+ S + +LD G ITRT RD+A++L A+ G Sbjct: 250 VPAALNGVVGLKPTYDLAPRRGVTSLSWTLDHVGPITRTARDAALVLAALTGQRPA---- 305 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 E + G+ VG+P Y D ++P ++ + I+ L+ GA++V++++P Sbjct: 306 --------EGGGPADLAGLRVGVPGNYYFDRVTPDVEAAVRAAIASLESRGARLVDVAIP 357 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + + + EA++ R +R G+D+ + E +G G Sbjct: 358 MADHVHAVHRGLMVPEATACHERT--LREAPERYGEDVRVLLEAGELVGAGD-------- 407 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 YLRAR+ TL++R + + + VDV+ PTTPT+A P+G E Sbjct: 408 -------------YLRARRATTLVRRAWARLWTE-VDVLAAPTTPTTAVPVGSGEVRRPD 453 Query: 426 MG-HIYNDVFT---VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G D + N+ G PA++VP + +P+GL+L+ P + L Sbjct: 454 GGAETVADAYVRLCAPANVTGGPAVTVPVGVDPDGLPIGLRLLAAPGADHHLL 506 >gi|90074856|dbj|BAE87102.1| D-amino-acid amidase [Delftia acidovorans] Length = 466 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 239/495 (48%), Gaps = 41/495 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL+ + + E ++S+ IS+ E+ + IE ++++++Y+ V+AQ+A A +D Sbjct: 4 SELHHLELLEVGREIQSRRISSEEVTRHMLARIEAVDARLHSYVTVMAQQAMEDARRADA 63 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G R L G+P+ +KD T+G+ T + RP ++TV ++L + GAV+LG Sbjct: 64 EIAQGRRRGALHGVPLALKDLLWTRGVPTTHGMTLHRDHRPTEDATVVRRLREAGAVILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL E A + + PV +PW + + PG SS GS A A LC S+GTDT Sbjct: 124 KLQQTEGAF-ADHHPEITAPV-NPWGA-----QLWPGASSSGSGVATAAGLCFGSLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G G+KPT+GR SR G A SLD G + R+ D+A +L AIAG D Sbjct: 177 GGSIRFPSAANGITGLKPTWGRVSRHGAFELAASLDHIGPMARSAADAAAMLAAIAGADP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T VPDY + + G+ +G+ +++ LD + + +Q ++ + GA + Sbjct: 237 LDPTASQCSVPDYLALMTRGFSGLRLGMDRQWALDGVDAPSRQAVEQALAVAQRLGASVQ 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ P A+ + PA + A G + R E +G + Sbjct: 297 EVRFPDATQAVEDW----PALCAVETAVAHGATFPARRE--------------AYGPGLA 338 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT---EAFEQGVDVILTPTTPTSAFPLG 417 I +G LS+ Y LR + DFT A VD++L P T +A P Sbjct: 339 GLIDLG-LGLSATDYQRLLLR--------RADFTGRVRALFAQVDLLLVPATAFAA-PTL 388 Query: 418 KEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + GS +++ + +T ++ G P I++P + P+ Q + FRE+ L Sbjct: 389 QRMAHFGSDAELFSGMLRYTCPFDLTGSPTITLPGGRTPEGAPVAFQFVAPDFREDLLVR 448 Query: 476 VGQIIEKEAGYFRPH 490 G ++ + R H Sbjct: 449 AGWAFQQATDWHRRH 463 >gi|255660121|ref|ZP_05405530.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma genitalium G37] Length = 434 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 131/439 (29%), Positives = 208/439 (47%), Gaps = 33/439 (7%) Query: 57 EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 +SD++I+ L IP +KD ATK I T S L + P + +TV + L NGA Sbjct: 9 NKSDEKIL------LNNIPYVLKDNIATKDIVTTGGSLFLKNYLPPFSATVFELLEMNGA 62 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +++GK NMDEF +G + S +G V P S GGSS GS+ AVA + SI Sbjct: 63 LLVGKANMDEFGLGGTGSYSAFGVVHHPENS-----SLIAGGSSSGSAYAVAKDIVPFSI 117 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 TDTG SIR+PAS VG KPTYG SR G+ +APS+D GI + V D AI+ + Sbjct: 118 ATDTGDSIRRPASICNVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDIAIVSDVVI 177 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-------IDKTWQQGI 289 +D+ D + P +Q + + + R YL P + K W Sbjct: 178 KHDKTDFSSQKSPDE------NQFFNELAIPFTRSIRFGYLKPLEKLFNKHLQKKWNNLK 231 Query: 290 SWLKDAGAKIV--EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 L+ +++ + + + Y IIS +EA S + G+ +G +V + + Sbjct: 232 KTLEQKNYQLIPLDFDVELLKVIDSIYKIISYSEAVSCYSNLTGIVFGQKVFEPNSPSNF 291 Query: 348 ENT----RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + T R G+++K R +IG + + ++ ++ +A+KIR ++ +F F VD Sbjct: 292 DQTITRNRDQFLGKQLKRRFVIGAFATDEKNFEKYFEKAQKIRRVLVDNFLNLFSD-VDF 350 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +L+P+ A + + N I D F N AG P+I++P + K +GL + Sbjct: 351 VLSPSASCFASTIEDIQANKPYTNII--DDFLQLANFAGSPSITIPWLVQTKDQTIGLSI 408 Query: 464 IGQPFREETLFSVGQIIEK 482 F ++ L + E+ Sbjct: 409 SANCFEDKKLLQIAYWFEQ 427 >gi|209515844|ref|ZP_03264706.1| Amidase [Burkholderia sp. H160] gi|209503692|gb|EEA03686.1| Amidase [Burkholderia sp. H160] Length = 465 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 136/495 (27%), Positives = 239/495 (48%), Gaps = 42/495 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+++ + +R+++IS VE+ + ++ IE + +++Y V+ ++A A E+++ Sbjct: 4 TDLHYLDIGTLARMIRTREISPVEVTRAMLERIERLDPTLHSYALVMRERALVDAAEAER 63 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +++ G+ L G+P+G+KD F T G T A + I F P+ ++TV ++L + GAV+LG Sbjct: 64 KVLAGETLGALHGVPLGVKDLFWTAGTPTAAGTTIHKNFVPNEDATVVRRLREAGAVVLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL M E A +++ S PV +PW + G SS GS A A LC ++GTDT Sbjct: 124 KLQMTEGAF-ATHHPSIAEPV-NPWHA-----NHWAGASSSGSGVATAAGLCYGALGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G GIKPT+GR SR G SLD G + R D+A++L IAGYD Sbjct: 177 GGSIRFPAAANGLTGIKPTWGRVSRYGAFELGASLDHVGPMARNAADAALMLGVIAGYDP 236 Query: 241 CDATCVNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D T +P+ +L ++G+ +GI + + I + ++ + LK+ GA Sbjct: 237 LDPTS----LPEERLSLSGQAGDLRGLRIGIDPAWNTEGTDAVIVEALERVLMVLKELGA 292 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 I E+ +P + + + + + LA D +++ +G Sbjct: 293 DIREVRVPAVRTVVDEWQEDCGVQVA--LAHAD----------------TWPSQAADYGP 334 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + I IG + S+ Y L +R + + +E +D+++ P P +A P Sbjct: 335 ALNRLIQIG-HETSALRYQQVLLNRAALRGQVNKVMSE-----IDLLVAPVQPFAA-PTH 387 Query: 418 KEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 ++ + + FT N G P++++P +P+G Q I E L Sbjct: 388 EQLGELAQSPELNARLIQFTAPFNSTGHPSMALPCGQTAAGLPIGFQFIAPHGDEAVLCR 447 Query: 476 VGQIIEKEAGYFRPH 490 G ++ + + H Sbjct: 448 AGMAFQRATSWHQAH 462 >gi|186474753|ref|YP_001863724.1| amidase [Burkholderia phymatum STM815] gi|184198712|gb|ACC76674.1| Amidase [Burkholderia phymatum STM815] Length = 447 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 145/479 (30%), Positives = 231/479 (48%), Gaps = 62/479 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L D++A+E+VD + E +N + + I V + ARA A +D+R G R L+GI Sbjct: 16 LSRGDVAALEVVDHSLALAEATNGLLKSLITVTSDCARAQARSADERRQVGRRRGILDGI 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P KD F T+GI T A S +L P ++ V +KL + GAV++GK NM EFA G++ E Sbjct: 76 PYVAKDVFKTEGIRTTAGSKVLAEHYPQEDAGVVRKLAEAGAVLVGKANMHEFAYGATGE 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G ++PW + GGSSGGS+AAVA + ++GTDTGGS+R PA+ G Sbjct: 136 NQFTGTTVNPW-----DQRRLAGGSSGGSAAAVAAGIVPFALGTDTGGSVRVPAALCGVT 190 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KPT+G G+I F +LD GII D ++++ ++ Sbjct: 191 GFKPTFGLLDSTGVIPFCWTLDHVGIIAGNADDVSVVIDSLTDLQVFRT----------- 239 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + S+ + +GIP+ + L P + ++ ++ L+ +GA EI LP + Sbjct: 240 ---NGSLHSLRIGIPRGWT-SLLEPGVRAGYELVVAVLRASGATFHEIDLPEHAESRTVS 295 Query: 315 YIISPAEA---SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 I AEA S L G +YG V G +VL Sbjct: 296 LTIQLAEALAYHSPLIASSGAQYGPDVRGG--------------------------FVLG 329 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-------FPLGKEENNSG 424 + Y++ +++ + + FT FE +D ILTPT P A P+G + G Sbjct: 330 QQLSAESYVQCQRLLSAYRASFTRHFET-IDAILTPTCPVVAPETGSTRIPVGDQLLPIG 388 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ++ F N+ G PA+++PA +K +P+ +QLIG P ++ + + + +E+E Sbjct: 389 NALTLFTSFF----NLVGAPAVALPAGTDDKGLPVSVQLIGAPGKDIAILELARHLEQE 443 >gi|302745838|gb|ADL62710.1| amidase [synthetic construct] Length = 467 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 239/495 (48%), Gaps = 41/495 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL+ + + E ++S+ IS+ E+ + IE ++++++Y+ V+AQ+A A +D Sbjct: 5 SELHHLELLEVGREIQSRRISSEEVTRHMLARIEAVDARLHSYVTVMAQQALEDARRADA 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G R L G+P+ +KD T+G+ T + RP ++TV ++L + GAV+LG Sbjct: 65 EIAQGRRRGALHGVPLALKDLLWTRGVPTTHGMTLHREHRPTEDATVVRRLREAGAVILG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL E A + + PV +PW + + PG SS GS A A LC S+GTDT Sbjct: 125 KLQQTEGAF-ADHHPEITAPV-NPWGA-----QLWPGASSSGSGVATAAGLCFGSLGTDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G G+KPT+GR SR G A SLD G + R+ D+A +L AIAG D Sbjct: 178 GGSIRFPSAANGITGLKPTWGRVSRHGAFELAASLDHIGPMARSAADAAAMLAAIAGADP 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T VPDY + + G+ +G+ +++ LD + + +Q ++ + GA + Sbjct: 238 LDPTASQCSVPDYLAMMTRGFSGLRLGMDRQWALDGVDAPSRQAVEQALAVAQRLGASVQ 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ P A+ + PA + A G + R E +G + Sbjct: 298 EVRFPDATQAVQDW----PALCAVETAVAHGATFPARRE--------------AYGPGLA 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT---EAFEQGVDVILTPTTPTSAFPLG 417 I +G LS+ Y LR + DFT A VD++L P T +A P Sbjct: 340 GLIDLG-LGLSATDYQRLLLR--------RADFTGRVRALFAQVDLLLVPATAFAA-PTL 389 Query: 418 KEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + GS +++ + +T ++ G P I++P + P+ Q + FRE+ L Sbjct: 390 QRMAHFGSDAELFSGMLRYTCPFDLTGSPTITLPGGRTPEGAPVAFQFVAPDFREDLLVR 449 Query: 476 VGQIIEKEAGYFRPH 490 G ++ + R H Sbjct: 450 AGWAFQQATDWHRQH 464 >gi|160900740|ref|YP_001566322.1| amidase [Delftia acidovorans SPH-1] gi|160366324|gb|ABX37937.1| Amidase [Delftia acidovorans SPH-1] Length = 466 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 148/495 (29%), Positives = 239/495 (48%), Gaps = 41/495 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL+ + + E ++S+ IS+ E+ + IE ++++++Y+ V+AQ+A A +D Sbjct: 4 SELHHLELLEVGREIQSRRISSEEVTRHMLARIEAVDARLHSYVTVMAQQALEDARRADA 63 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G R L G+P+ +KD T+G+ T + RP ++TV ++L + GAV+LG Sbjct: 64 EIAQGRRRGALHGVPLALKDLLWTRGVPTTHGMTLHREHRPTEDATVVRRLREAGAVILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL E A + + PV +PW + + PG SS GS A A LC S+GTDT Sbjct: 124 KLQQTEGAF-ADHHPEITAPV-NPWGA-----QLWPGASSSGSGVATAAGLCFGSLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G G+KPT+GR SR G A SLD G + R+ D+A +L AIAG D Sbjct: 177 GGSIRFPSAANGITGLKPTWGRVSRHGAFELAASLDHIGPMARSAADAAAMLAAIAGADP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T VPDY + + G+ +G+ +++ LD + + +Q ++ + GA + Sbjct: 237 LDPTASQCSVPDYLAMMTRGFSGLRLGMDRQWALDGVDAPSRQAVEQALAVAQRLGASVQ 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ P A+ + PA + A G + R E +G + Sbjct: 297 EVRFPDATQAVQDW----PALCAVETAVAHGATFPARRE--------------AYGPGLA 338 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT---EAFEQGVDVILTPTTPTSAFPLG 417 I +G LS+ Y LR + DFT A VD++L P T +A P Sbjct: 339 GLIDLG-LGLSATDYQRLLLR--------RADFTGRVRALFAQVDLLLVPATAFAA-PTL 388 Query: 418 KEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + GS +++ + +T ++ G P I++P + P+ Q + FRE+ L Sbjct: 389 QRMAHFGSDAELFSGMLRYTCPFDLTGSPTITLPGGRTPEGAPVAFQFVAPDFREDLLVR 448 Query: 476 VGQIIEKEAGYFRPH 490 G ++ + R H Sbjct: 449 AGWAFQQATDWHRQH 463 >gi|10433608|dbj|BAB13996.1| unnamed protein product [Homo sapiens] Length = 303 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 117/300 (39%), Positives = 165/300 (55%), Gaps = 25/300 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E L+ I+ EL + I+ + +NAYI V + A AEES+KR NG Sbjct: 5 SLREVSAALKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQ 63 Query: 68 AR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + DL+GIPI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DE Sbjct: 64 SLGDLDGIPIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDE 123 Query: 127 FAMGSSNETSYYGPVISPW---RSMDSTDKFTPGGSSGGSSAAVA------------GFL 171 FAMGS + +GPV +PW + K P + S + F Sbjct: 124 FAMGSGSTDGVFGPVKNPWSYSKQYREKRKQNPHSENEDSDWLITGGSSGGSAAAVSAFT 183 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 C A++G+DTGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+ Sbjct: 184 CYAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIV 243 Query: 232 LKAIAGYDECDATCVNLPV--PDYERALDQSIQGMTVGIPK-----EYRLDYLSPTIDKT 284 L A+AG D D+T V+ P+ P +L + + +GIPK Y + LS I+ T Sbjct: 244 LGALAGPDPRDSTTVHEPINKPFMLPSL-ADVSKLCIGIPKVTFSFHYFTEILSSPIEST 302 >gi|55664378|emb|CAH72094.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Homo sapiens] Length = 319 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 125/300 (41%), Positives = 174/300 (58%), Gaps = 25/300 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E L+ I+ EL + I+ + +NAYI V + A AEES+KR NG Sbjct: 5 SLREVSAALKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQ 63 Query: 68 AR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + DL+GIPI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DE Sbjct: 64 SLGDLDGIPIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDE 123 Query: 127 FAMGSSNETSYYGPVISPW---------------RSMDSTDKFTPGGSSGGSSAAVAGFL 171 FAMGS + +GPV +PW + +D GGSSGGS+AAV+ F Sbjct: 124 FAMGSGSTDGVFGPVKNPWSYSKQYREKRKQNPHSENEDSDWLITGGSSGGSAAAVSAFT 183 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 C A++G+DTGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+ Sbjct: 184 CYAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIV 243 Query: 232 LKAIAGYDECDATCVNLPV--PDYERALDQSIQGMTVGIPK-----EYRLDYLSPTIDKT 284 L A+AG D D+T V+ P+ P +L + + +GIPK Y + LS I+ T Sbjct: 244 LGALAGPDPRDSTTVHEPINKPFMLPSL-ADVSKLCIGIPKVTFSFHYFTEILSSPIEST 302 >gi|215432345|ref|ZP_03430264.1| amidase AmiD [Mycobacterium tuberculosis EAS054] gi|289755506|ref|ZP_06514884.1| amidase amiD [Mycobacterium tuberculosis EAS054] gi|289696093|gb|EFD63522.1| amidase amiD [Mycobacterium tuberculosis EAS054] Length = 475 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 238/497 (47%), Gaps = 55/497 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E D +R++ +++ E+ +S + IE + Q+ +Y V+ + A AAA +D I Sbjct: 17 ISKLELTEVADLIRTRQLTSAEVTESTPRRIERLDPQLKSYAFVMPETALAAARAADADI 76 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PIG+KD T T A + I FRP Y++TV +L GAV++GKL Sbjct: 77 ARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKL 136 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 M E A Y+ + +P D T G SS G A A LC SIG+DTGG Sbjct: 137 AMTEGAY-----LGYHPSLPTPVNPWDPTAWA--GVSSSGCGVATAAGLCFGSIGSDTGG 189 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P S G GIKPT+GR SR G++ A S D G ITR+ D+A+LL IAG D D Sbjct: 190 SIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSVIAGSDIHD 249 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +C PVPDY A D ++ + P + W Q S+ +D A + ++ Sbjct: 250 PSCSAEPVPDY--AADLALTRI--------------PRVGVDWSQTTSFDEDTTAMLADV 293 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + PA A +A + +R VE R+ +G ++ Sbjct: 294 VKTLDDIGWPVIDVKLPALA-PMVAAFGKMRA---VETAIAHADTYPARADEYGPIMRAM 349 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQ---GVDVILTPT----TPT-- 411 I G H L A + +TL +R +FT + + VD++L P+ +PT Sbjct: 350 IDAG-----------HRLAAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASPTLE 398 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + LG++ + + + T N++G PAI +PA + PLG+Q IG+ F E Sbjct: 399 TMRGLGQDPELTARLA-----MPTAPFNVSGNPAICLPAGTTARGTPLGVQFIGREFDEH 453 Query: 472 TLFSVGQIIEKEAGYFR 488 L G ++ GY R Sbjct: 454 LLVRAGHAFQQVTGYHR 470 >gi|114608703|ref|XP_001145099.1| PREDICTED: glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 isoform 1 [Pan troglodytes] Length = 319 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 125/300 (41%), Positives = 174/300 (58%), Gaps = 25/300 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E L+ I+ EL + I+ + +NAYI V + A AEES+KR NG Sbjct: 5 SLREVSAALKQGQITPTELCQKCLSLIKKTKF-LNAYITVSEEVALKQAEESEKRYKNGQ 63 Query: 68 AR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + DL+GIPI +KD F+T GI T S++L G+ P Y +TV QKL D GA+++GK N+DE Sbjct: 64 SLGDLDGIPIAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDQGALLMGKTNLDE 123 Query: 127 FAMGSSNETSYYGPVISPW---------------RSMDSTDKFTPGGSSGGSSAAVAGFL 171 FAMGS + +GPV +PW + +D GGSSGGS+AAV+ F Sbjct: 124 FAMGSGSTDGVFGPVKNPWSYSKQYREKRKQNPHSENEDSDWLITGGSSGGSAAAVSAFT 183 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 C A++G+DTGGS R PA+ G VG KP+YG SR G+I S+D GI+TR V D+AI+ Sbjct: 184 CYAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIV 243 Query: 232 LKAIAGYDECDATCVNLPV--PDYERALDQSIQGMTVGIPK-----EYRLDYLSPTIDKT 284 L A+AG D D+T V+ P+ P +L + + +GIPK Y + LS I+ T Sbjct: 244 LGALAGPDPRDSTTVHEPINKPFMLPSL-ADVSKLCIGIPKVTFSFRYFTEILSSPIEST 302 >gi|299135539|ref|ZP_07028723.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298601663|gb|EFI57817.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 522 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 146/499 (29%), Positives = 237/499 (47%), Gaps = 46/499 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L M +SE+ +R++ ++ +L + + I + ++N+YI V+ ++A A + D+ Sbjct: 39 KLTTMTLSEASAAIRNRSVTPTQLTKAVLGRIAVYDPKLNSYITVMGREALKQAAQLDEE 98 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G R L GIPI +KD T G T A S + P ++T+ +KL +GA++LGK Sbjct: 99 QKAGKFRGPLHGIPIALKDNIDTAGTRTTAASGVFQKRIPTEDATIVRKLKASGAIILGK 158 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN+ EFA+G + + SY+GP +PW + D+ T G S+G +A LC A++GTDTG Sbjct: 159 LNLHEFALGCTGDVSYFGPTRNPW----ALDRVTGGSSAGSGAAVAGD-LCFAALGTDTG 213 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+S+ G G+KPT G S GII A SLD G + R+V D A++L + GYD Sbjct: 214 GSIRVPSSWCGIAGLKPTTGLVSIRGIIPCAASLDHCGPMARSVEDVALMLGEMTGYDNL 273 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D V DY +A+ Q + +G P E+ D++ P + L A I Sbjct: 274 DIFSVQHGPEDYTKAMKQPVSSFKLGAPAEF-YDHMEPEVAAAIAAACEVLSKLTAGIT- 331 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP P + + D Y + TR +++ Sbjct: 332 -----SHAPLPDM----PEGNNFFMQLGDTASYHEPLFKGAPTAYMPPTR-----MQLER 377 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 I G+ V S+R +D LI+R AF +D+++ PT P ++ Sbjct: 378 MIQGGSAVDSARAHDE--------LALIRRTVDAAFTD-IDLVVMPT--IRNLPPTINDS 426 Query: 422 NSGSMG----HIYNDVF--------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + MG +Y D F T ++ GLPA+++P +P+GL + G F Sbjct: 427 LAAEMGTKKPRVY-DFFAAPSGCTNTAPFDVYGLPALTIPCGFSTSGLPIGLMIAGPHFA 485 Query: 470 EETLFSVGQIIEKEAGYFR 488 E + ++G ++ + + Sbjct: 486 EGKVLALGYAYQQATDWHK 504 >gi|302526056|ref|ZP_07278398.1| predicted protein [Streptomyces sp. AA4] gi|302434951|gb|EFL06767.1| predicted protein [Streptomyces sp. AA4] Length = 480 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 145/484 (29%), Positives = 240/484 (49%), Gaps = 60/484 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++E+ +R + +S ELV+ + I+ ++ AY+ V A +ARA A E + Sbjct: 45 LADLTLAEASAAIRDRRVSPAELVEDVLARIDEVEPRLRAYVTVDADRARAEAAELGE-- 102 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I+G L GIP+G+KD G T A S + G R +STV +L GAV+LGK + Sbjct: 103 IHGP---LHGIPMGLKDLIDVAGTATTASSQVRAGHRAERDSTVAAQLKAAGAVLLGKTH 159 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA G + ++ R+ + GGS+ +A A F ++GTDTGGS Sbjct: 160 THEFAYGLTTPQTHNA------RNPSRVAGGSSGGSAVAVAAGAATF----AMGTDTGGS 209 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA+ G VG+KPTYG R G+ S + SLD G ITRTV D+A++L + G Sbjct: 210 IRVPAALNGVVGLKPTYGLIPRNGVTSLSWSLDHVGPITRTVEDAALVLSVLIG------ 263 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 ++ + G+ VG+P Y D++ P ++ ++ I L + GA++V++ Sbjct: 264 ---------QSFSIGDDLTGLRVGVPGNYYFDHVDPAVEAAVREAIDHLAELGAELVDVE 314 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHR 362 +P T+Y ++GL V E E T + +V+ Sbjct: 315 IPMTRY-------------------LQATQWGLMVPEATAYHERSLRTVPDQYAADVRVL 355 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN- 421 + G + + YLRA++ RTL+++++T F++ +DV+ PT P +A P G+E Sbjct: 356 LEAGELMSA-----GDYLRAQRSRTLMRQEWTRLFDK-IDVLAAPTVPMTAVPAGQETVT 409 Query: 422 -NSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + GS+ + + + N+ G+PA+++P +P+GLQL+ + E L G Sbjct: 410 WSDGSVEAVSDAYVRLSAPANITGVPALTLPVGDDPDGLPIGLQLLARSHGESVLLRTGH 469 Query: 479 IIEK 482 +E+ Sbjct: 470 ALER 473 >gi|218439121|ref|YP_002377450.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424] gi|218171849|gb|ACK70582.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424] Length = 457 Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 157/474 (33%), Positives = 227/474 (47%), Gaps = 41/474 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R A +V +Q IE N +N + V A+ A A + D G L G+ Sbjct: 15 IRRGKTRATTVVKETLQKIEKLNPTLNCFTTVTAETALIQARQIDTEREQGKPLGPLAGV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ F G+ T A S I P E+T +L GA+++G LNMDE+A G Sbjct: 75 PFAVKNLFDIAGVVTLAGSKINQDNSPAIREATALSRLKKAGAILVGALNMDEYAYGFVT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YG +P +D T GGSSGGS+AAVAG L S+G+DT GSIR PA+F G Sbjct: 135 ENSHYGATPNP---LDITR--ISGGSSGGSAAAVAGDLVTFSLGSDTNGSIRVPAAFCGL 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G KPTYGR SR G F+ SLD G R+VRD A + + G D D C P Sbjct: 190 YGFKPTYGRLSRAGTFLFSSSLDHIGPFARSVRDIATIFDLLQGEDPRDPVCTKRPPHPC 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 LD I+G+ + I DY S + + + + + I++P A A Sbjct: 250 LPELDAGIEGVRIAIAD----DYFSEGAEPEALKAVEAIAELLGVKQRITIPQADRARAA 305 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YII+ +E S+ +LA TR F + R + G + + Sbjct: 306 AYIITASEGSNLHLANL-------------------KTRLQDFDPATRDRFLAGALIPA- 345 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NNSGSMGHIYN 431 Y++A++ R + E F+Q VD+IL PTTP A +G+E+ +G I Sbjct: 346 ----DWYIQAQRFRRWYRDRLREVFQQ-VDIILAPTTPCVAPAIGQEKITIAGEEIVIRP 400 Query: 432 DV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ FT ++ GLP +S P K +PLG+QLI P++E T+ V + +E + Sbjct: 401 NLGRFTQPLSFVGLPVLSFPIK-QPKSLPLGVQLIAAPYQEATILKVAKFLEDQ 453 >gi|300721624|ref|YP_003710899.1| putative amidase amiD [Xenorhabdus nematophila ATCC 19061] gi|297628116|emb|CBJ88667.1| putative amidase amiD [Xenorhabdus nematophila ATCC 19061] Length = 460 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 145/498 (29%), Positives = 231/498 (46%), Gaps = 49/498 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE ++ + R++S++IS+ E+ I IE +S +++Y V+ + A A A +D Sbjct: 1 MSEFHYQDLLTIGRRIQSREISSEEVTQELINRIEYLDSTLHSYFIVMKKSALAEARIAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I G R L G+P+ +KD KG+ T +++ F P STV ++L GAV+L Sbjct: 61 EEIARGKFRGPLHGVPLAVKDLLWAKGVMTTNGMPLVNQFVPQENSTVVERLRAAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL E A+ + S P +PW + G SS GS A A LC SIGTD Sbjct: 121 GKLIQTEGALFEHH--SQLTPPTNPW-----LKQLWSGASSSGSGVATAAGLCYGSIGTD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P++ G GIKPT+GR SR G A S+D G + R V D+ +L+AIAG D Sbjct: 174 TGGSIRFPSAINGITGIKPTWGRVSRYGAFELAASMDHIGPMARNVADATAILQAIAGRD 233 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T VPDY + + ++ M +G+ + LD + + + + + GA++ Sbjct: 234 PKDPTSSTHHVPDYLALMTRGVRNMRIGVDATWALDRVDESTRVALTKTLDHFIELGAEV 293 Query: 300 VEISLPHT-QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 V+IS+P T Q A + + A ++ + +R ++L++ N ++ Sbjct: 294 VDISMPDTVQIAHDWNPMCAIETAVAHEKTFPSMREQYGSGLAELLDLGHNIDAL----- 348 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 D LR + R R + + VDVI +P + Sbjct: 349 -----------------DYQKLRLSRARL---RGYINGIFESVDVIFSPVIALADLTHDV 388 Query: 416 ---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 LG+ ++ + Y VF N G PAI++P + P+ Q+I F E T Sbjct: 389 MKILGEGDDMA-----CYTSVF----NFTGNPAITLPCGRTKLGAPIAYQIIASHFEEVT 439 Query: 473 LFSVGQIIEKEAGYFRPH 490 + G ++ + + H Sbjct: 440 MIQAGWAYQQVTHWHKLH 457 >gi|288960643|ref|YP_003450983.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] gi|288912951|dbj|BAI74439.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] Length = 469 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 147/474 (31%), Positives = 225/474 (47%), Gaps = 42/474 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R +SA + ++ + I N +NA+ +V A +AR A E D RI G D L G+ Sbjct: 17 VRGGGLSATAVTEAALDRIARLNPVLNAFTDVTADRARREAAELDARIAAGADPGPLAGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ +K+ F G+ T+A S I P ++ + ++L GAV++G LNM E+A + Sbjct: 77 PVAVKNLFDIGGLPTRAGSRINRDRPPATADAVLLRRLTAAGAVLVGGLNMGEYAYDFTG 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E ++ G +P GGSS G AA A L S+G+DT GSIR P+SF G Sbjct: 137 ENAHDGACRNP-----HDPSRMAGGSSSGCGAATAAGLAPLSLGSDTNGSIRVPSSFCGI 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPTYGR +R G F SLD G R+VRD A+ + G E D C PV Sbjct: 192 FGLKPTYGRLTRHGSFPFCDSLDHLGPFARSVRDLALAYDVLQGPAEGDHACAGRPVEPA 251 Query: 254 ERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ALD S + G+ + + Y P + L ++VE LP + Sbjct: 252 LPALDASGLDGLRIAVAGGYFARGGQPEAHDAVARAAQALGT--DRVVE--LPGAELGRA 307 Query: 313 AYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 A YII+ AE+S+ +L R TR+ F + + R + G + + Sbjct: 308 AAYIITNAESSAFHLERL-------------------RTRAGDFDPDTRDRFLAGALLPA 348 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGH 428 + Y++A+++R D A + VDV+L P TP +A +G++ + Sbjct: 349 -----AWYVQAQRVRRWYH-DRVMALFREVDVLLAPATPCTAPLVGRKTMVLDGREMPVR 402 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +FT ++ GLP +VP A P+G+Q+I P+REET V +E+ Sbjct: 403 PHLGLFTQPISCIGLPVCAVPMA-PPGAPPIGIQVIAAPWREETCLRVAAELER 455 >gi|322436886|ref|YP_004219098.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321164613|gb|ADW70318.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 520 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 147/494 (29%), Positives = 227/494 (45%), Gaps = 39/494 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++E+ R+ + +++ +L + + I + +++A+I V+ KA A A D Sbjct: 37 TDLTKLTLAEASARIHAGTVTSTQLTKACLDRIAIYDPKLDAFITVMRDKALAQAAILDA 96 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G R L GIP+ +KD T G T A S + P ++ VT +L GAV++G Sbjct: 97 EQKAGKLRGPLHGIPVALKDNIDTAGTRTTAASGVFQDRVPAEDAPVTTRLKAAGAVIIG 156 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EFAMG+ E S++G +PW +T SS GS AA++ LC S+GTDT Sbjct: 157 KTNLHEFAMGA-GEASFFGAARNPWALDHNTGG-----SSSGSGAAMSADLCYGSLGTDT 210 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P +F G VGIKPTYG GI SLD G ITRTV D+A++L +AGYD Sbjct: 211 AGSIRNPGAFCGVVGIKPTYGLVPIRGIAPLCVSLDHCGPITRTVEDAAMMLNVLAGYDH 270 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V DY + Q I+G+ +GIP D + P + + I L + Sbjct: 271 LDITSVEHAKEDYVAGMKQPIKGLRLGIPIG-AFDGVDPQVGQLVHTAIELLATLTRGVK 329 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+SLP T +++A + G + ++ R Q V Sbjct: 330 EVSLPST----------------NDVAYQNFASMGETFAYHEQFFKLQSNRY----QPVD 369 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA------- 413 R + R D Y+R R ++R +AF D++L PT +A Sbjct: 370 RRRLEAEEATHPRAED--YIRLRWELETLRRTIDDAFTD-FDLVLMPTQKVTAPVLDDML 426 Query: 414 -FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 L S A N G+P+++VP ++ +P+GL + G F E Sbjct: 427 RRNLQPTTTPLTSSSTAGGGSSVGAYNAYGIPSLTVPCGFSKEGLPVGLMICGPHFSESK 486 Query: 473 LFSVGQIIEKEAGY 486 + ++ E+ + Sbjct: 487 VLALAHAYEQATAW 500 >gi|260206740|ref|ZP_05774231.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis K85] gi|289576108|ref|ZP_06456335.1| amidase amiD [Mycobacterium tuberculosis K85] gi|289540539|gb|EFD45117.1| amidase amiD [Mycobacterium tuberculosis K85] Length = 475 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 161/500 (32%), Positives = 242/500 (48%), Gaps = 61/500 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ + ++E D +R++ +++ E+ +S ++ IE + Q+ +Y V+ + A AAA +D I Sbjct: 17 ISKLELTEVADLIRTRQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAADADI 76 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PIG+KD T T A + I FRP Y++TV +L GAV++GKL Sbjct: 77 ARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKL 136 Query: 123 NMDEFA-MG--SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 M E A +G S TS ++PW D T G SS G A A LC SIG+D Sbjct: 137 AMTEGAYLGYHPSLPTS-----VNPW---DPTAWA--GVSSSGCGVATAAGLCFGSIGSD 186 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P S G GIKPT+GR SR G++ A S D G IT + D+A+LL IAG D Sbjct: 187 TGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITSSAHDAAVLLSVIAGSD 246 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D +C PVPDY A D ++ + P + W Q S+ +D A + Sbjct: 247 IHDPSCSAEPVPDY--AADLALTRI--------------PRVGVDWSQTTSFDEDTTAML 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ P + PA A +A + +R VE R+ +G + Sbjct: 291 ADVVKTLDDIGWPVIDVKLPALA-PMVAAFGKMRA---VETAIAHADTYPARADEYGPIM 346 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQ---GVDVILTPT----TP 410 + I G H L A + +TL +R +FT + + VD++L P+ +P Sbjct: 347 RAMIDAG-----------HRLAAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASP 395 Query: 411 T--SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 T + LG++ + + + T N++G PAI +PA + PLG+Q IG+ F Sbjct: 396 TLETMRGLGQDPELTARLA-----MPTAPFNVSGNPAICLPAGTTARGTPLGVQFIGREF 450 Query: 469 REETLFSVGQIIEKEAGYFR 488 E L G ++ GY R Sbjct: 451 DEHLLVRAGHAFQQVTGYHR 470 >gi|322436887|ref|YP_004219099.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321164614|gb|ADW70319.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 557 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 162/517 (31%), Positives = 244/517 (47%), Gaps = 65/517 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L M ++E + K I++ ELV + + I N ++N YI V+ ++A A A D Sbjct: 42 KLTAMTLTEVSGMIHMKTITSTELVKALLDRINLLNPKLNCYITVMGKEALAQAATLDAE 101 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G R L GIPI +KD T G T A S + P ++ + +KL GA++LGK Sbjct: 102 QKAGKFRGPLHGIPISLKDNIDTAGTRTTAASPMFKDRVPTEDAEIVRKLKLAGAIILGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN+ EFA+G + + SY+GP +PW + GGSS GS AAV+ L ++GTDTG Sbjct: 162 LNLHEFALGCTGDISYFGPSRNPWNL-----AYVTGGSSAGSGAAVSATLAYGALGTDTG 216 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+++ G VG+KPT G S GII + LD G + RTV D A++L +AGYD Sbjct: 217 GSIRCPSAWCGIVGLKPTIGLVSIRGIIPCSADLDHCGPMARTVEDVALMLTQMAGYDSL 276 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D V DY + + Q ++G +G P+ + D++ P I+K + + L A + Sbjct: 277 DIFSVPSTPADYVKEMTQPVKGFRLGTPQSF-YDHVEPEIEKAIKAALEVLTSLTAGVTS 335 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLR--VEGKDILEMYENTRSIGFGQE 358 + ++ LP A S +D + RYGL + + E EN G + Sbjct: 336 SAPLWSE--LPGG-----APGDSEFYHHDLIERYGLNYMLPTRTRFERMENPTP---GAK 385 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT----PT--- 411 V T +R + + L R +A + D+++ PTT PT Sbjct: 386 V------ATAADDARAHQ---------KLLTTRRMIDASFKDFDLVVVPTTRNLAPTIND 430 Query: 412 ---SAFPLGKEENNSGSM-----GHIYNDVF--------TVAVNMAGLPAISVPAALCEK 455 + L K +SGS G +Y D F T + G+PAIS+P E Sbjct: 431 SLANETKLSKAPASSGSRLEGVNGKVY-DWFAPGGGCTNTAPFDAYGIPAISLPCGFTES 489 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 MP+GL + G F E G+++ Y + +W Sbjct: 490 GMPIGLMIAGPHFTE------GKVLALAYAYQQATQW 520 >gi|71906992|ref|YP_284579.1| amidase [Dechloromonas aromatica RCB] gi|71846613|gb|AAZ46109.1| Amidase [Dechloromonas aromatica RCB] Length = 466 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 149/505 (29%), Positives = 246/505 (48%), Gaps = 60/505 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +SEL+++ ++E +R +++S VE+ + + IE + +++AY V+ + A A A E++ Sbjct: 3 VSELHYLEMTELARCMRKRELSPVEVTAATLARIEALDPKLHAYATVLPEYAMAQAREAE 62 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I+ G D L G+PIG+KD T A + + GF P ++TV ++L GA++L Sbjct: 63 RSIMAGEDVGPLCGVPIGVKDLCWVANYPTAAGTTVHRGFVPGEDATVVKRLRAAGAIIL 122 Query: 120 GKLNMDEFAMGSSNETSYYGPV-ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GKL + E A + + T PV ++PW + G SS GS A A LC A+IGT Sbjct: 123 GKLQLTEGAFATHHPTI---PVPLNPW-----GEAHWSGASSSGSGVATAAGLCYAAIGT 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGSIR P++ G GIKPT+GR SR G+ A S+D G + R+ D+A+LL +AG+ Sbjct: 175 DTGGSIRFPSAANGLTGIKPTWGRVSRYGVFELAASMDHVGSMARSAADAALLLGVMAGH 234 Query: 239 DECDATCVNLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D D T +PD L Q ++G+ VGI + + P I + + I+ + Sbjct: 235 DPLDPTS----LPDEGLTLPHEAQDLRGLRVGIDRAWNALGTEPVITQAIDRAINVIAGL 290 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---RS 352 GA+ ++++ P + + E +N G ++ + NT + Sbjct: 291 GARFIDVAFPDARAVV--------DEWETNC-------------GVEVAVAHANTFPKFT 329 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR-DFT---EAFEQGVDVILTPT 408 +G + I +G R D+ + R L+ R +FT Q VD+++ P Sbjct: 330 AEYGPALSRLIELG------RATDAMDYQ----RVLLNRAEFTGRLNKLMQSVDLLILPV 379 Query: 409 TPTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 P +A LG ++ + + FT +N +G PAI++P E+ +PL Q I Sbjct: 380 QPYAAPTYEQLGALADDPEANSRLIQ--FTAPINSSGHPAITLPCGFTEQGLPLAFQFIA 437 Query: 466 QPFREETLFSVGQIIEKEAGYFRPH 490 + E L G + + R H Sbjct: 438 RHGDEAVLCRAGLAFQSATDWHRWH 462 >gi|71894116|ref|YP_278224.1| amidase [Mycoplasma synoviae 53] gi|71850904|gb|AAZ43513.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma synoviae 53] Length = 439 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 133/414 (32%), Positives = 207/414 (50%), Gaps = 22/414 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+ IKD FAT TQA S IL+ F+P Y + + L + GA + K++ DE A+G Sbjct: 39 LKDCVFTIKDVFATNDAPTQASSKILENFQPSYNAYPVELLINAGAKKVAKVHSDELALG 98 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S YG V +P DK G S S A + ++G+DTG S+R PASF Sbjct: 99 GTGLHSAYGIVKNP------KDKSKQSGGSSSGSVASFSKNISFALGSDTGDSVRLPASF 152 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KP+YG SR G+ ++A SLD T V D+ L K + D+ D T V + + Sbjct: 153 NGVVGFKPSYGAISRYGMFAYASSLDTVAYFTHNVHDAYELAKVLYQVDKRDFTNVEVKL 212 Query: 251 PDYERALD-QSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + +A +S+ + V ++Y D + +D+ +Q + K+VE +L + Sbjct: 213 SENNKAKKPKSVLALDVSKYCEKYVADSYTKLLDELKKQNVD------IKLVEPNLDVLR 266 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 Y IIS +EASSNLA GV +G R +G E+ NTRS G+ V+ R+++G+Y Sbjct: 267 SVRATYKIISFSEASSNLANLTGVAFGNREKGSSWEEVMTNTRSKHLGKMVQERLVLGSY 326 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 L +L+A+K R +IK ++ E+ DV++ PT + A + + + Sbjct: 327 FLFDDNQKDLFLKAQKARRVIK-NYWESLINSYDVVIFPTFASVASDIKNPK------SY 379 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D N+ G P++S+P + + L L G+ + +E L GQ EK Sbjct: 380 DFMDYILTTSNLTGNPSLSIPLG-KHQNLDFNLSLDGKVYGDEALLQYGQFFEK 432 >gi|15828671|ref|NP_326031.1| amidase [Mycoplasma pulmonis UAB CTIP] gi|14089613|emb|CAC13373.1| GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A (GLU-ADT SUBUNIT A) [Mycoplasma pulmonis] Length = 448 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 26/417 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+ +KD +ATK T+A S L+ F+P Y S+V Q+L D GA M+ K++ DEF +G Sbjct: 45 LKGVVYTLKDNYATKEYETKASSKTLENFKPLYNSSVYQRLVDQGASMVAKVHCDEFGLG 104 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S YG + +P +DST G S SAA + SIG+DTG S+R PAS+ Sbjct: 105 GTGTFSAYGIIKNP---LDST---RLAGGSSSGSAASMFYDIGFSIGSDTGDSVRLPASW 158 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KP+YG SR G+ ++A SLD + V D+ +L K + G D+ D + V Sbjct: 159 IGKVGFKPSYGAISRYGLFTYASSLDTVAYFSHNVSDAIVLSKVLYGKDKKDMSSV---- 214 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 E +L+++ + I + LS + ++++ I +L+ G ++V+I + + Sbjct: 215 ---EVSLEKTQETKPKKIAYFNCFNELSKEVAQSFKNLIKFLESQGIEMVKIEIDYQMMN 271 Query: 311 LPAYY--IISPAEASSNLARYDGVRYGLRVEGKDI---LEMYENTRSIGFGQEVKHRIMI 365 Y IIS +EA SNL+ G+ +G + D E+ RS FG V+ R+++ Sbjct: 272 NIKYVYDIISYSEAFSNLSNIKGLHFGKTFDKDDFDSWKELCLKNRSTFFGDMVQRRLLL 331 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G+ L D + +A+++R I + ++ FE+ +V++ P A P E+N Sbjct: 332 GSIFLDENNIDQTFFKAKRLRYSIYKYLSKIFEEN-EVLIYPAYKDIA-PKFDEQNEQNY 389 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 M D + N+ G P+I++P + MP G+ + + + L S EK Sbjct: 390 M-----DFILSSSNLVGNPSITIPFG-TKDNMPFGININTNLYEDAKLLSYSLYFEK 440 >gi|54019988|ref|YP_115544.1| amidase [Mycoplasma hyopneumoniae 232] gi|53987161|gb|AAV27362.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyopneumoniae 232] Length = 439 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/384 (33%), Positives = 202/384 (52%), Gaps = 17/384 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FAT + A S L F+P Y +TV QKL + GA L K++ DE +G S Sbjct: 44 IKSNFATTEGVSHASSISLLNFKPSYNATVFQKLINAGAQPLVKVHNDELGLGGKGLFSA 103 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +++P +D T GGSS GS+A + +IG+DTG SIR+PASF G VG K Sbjct: 104 FGKIVNP---LDKTK--LIGGSSSGSAATIN--FVHFAIGSDTGDSIRRPASFIGKVGFK 156 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG SR G+ +A SLD +T V DS ++ + + G DE D T V + V + E+ Sbjct: 157 PSYGAVSRYGLFPYATSLDTVAWLTHNVLDSILVSQVVFGSDENDLTSVEIDVKNVEKTK 216 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + + + E DY+ + K + I +I++ L + LP Y II Sbjct: 217 PKKVAFLDLDAEIE---DYVVKKLYKL--RNILKSDQVEIEIIKPDLNLLKTILPVYEII 271 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 S +EA+SNL+ +G+ +G + E++ TRS GFG ++ R++ G++ L + Sbjct: 272 SYSEATSNLSAINGITFGNTEKNLKWEEIFIRTRSDGFGLMLQKRLIWGSFFLEKDNQEH 331 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +++A+K+RTLIK ++ E+ D+++ P A + E NS I N + ++ Sbjct: 332 FFIKAKKMRTLIK-NYYESILNKFDLVVFPAFYGIAPDIQGE--NSEKSDKITNFILAIS 388 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 N+ G P+IS+P K +P L Sbjct: 389 -NLVGNPSISLPLG-SYKNLPFNL 410 >gi|71893383|ref|YP_278829.1| amidase [Mycoplasma hyopneumoniae J] Length = 440 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/384 (33%), Positives = 202/384 (52%), Gaps = 17/384 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FAT + A S L F+P Y +TV QKL + GA L K++ DE +G S Sbjct: 45 IKSNFATTEGVSHASSISLLNFKPSYNATVFQKLINAGAQPLVKVHNDELGLGGKGLFSA 104 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +++P +D T GGSS GS+A + +IG+DTG SIR+PASF G VG K Sbjct: 105 FGKIVNP---LDKTK--LIGGSSSGSAATIN--FVHFAIGSDTGDSIRRPASFIGKVGFK 157 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG SR G+ +A SLD +T V DS ++ + + G DE D T V + V + E+ Sbjct: 158 PSYGAVSRYGLFPYATSLDTVAWLTHNVLDSILVSQVVFGSDENDLTSVEIDVKNVEKTK 217 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + + + E DY+ + K + I +I++ L + LP Y II Sbjct: 218 PKKVAFLDLDAEIE---DYVVKKLYKL--RNILKSDQVEIEIIKPDLNLLKTILPVYEII 272 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 S +EA+SNL+ +G+ +G + E++ TRS GFG ++ R++ G++ L + Sbjct: 273 SYSEATSNLSAINGITFGNTEKNLKWEEIFIRTRSDGFGLMLQKRLIWGSFFLEKDNQEH 332 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +++A+K+RTLIK ++ E+ D+++ P A + E NS I N + ++ Sbjct: 333 FFIKAKKMRTLIK-NYYESILNKFDLVVFPAFYGIAPDIQGE--NSEKSDKITNFILAIS 389 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 N+ G P+IS+P K +P L Sbjct: 390 -NLVGNPSISLPLG-SYKNLPFNL 411 >gi|144227429|gb|AAZ44118.2| glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyopneumoniae J] gi|312600995|gb|ADQ90250.1| Glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyopneumoniae 168] Length = 439 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 128/384 (33%), Positives = 202/384 (52%), Gaps = 17/384 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FAT + A S L F+P Y +TV QKL + GA L K++ DE +G S Sbjct: 44 IKSNFATTEGVSHASSISLLNFKPSYNATVFQKLINAGAQPLVKVHNDELGLGGKGLFSA 103 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +++P +D T GGSS GS+A + +IG+DTG SIR+PASF G VG K Sbjct: 104 FGKIVNP---LDKTK--LIGGSSSGSAATIN--FVHFAIGSDTGDSIRRPASFIGKVGFK 156 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG SR G+ +A SLD +T V DS ++ + + G DE D T V + V + E+ Sbjct: 157 PSYGAVSRYGLFPYATSLDTVAWLTHNVLDSILVSQVVFGSDENDLTSVEIDVKNVEKTK 216 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + + + E DY+ + K + I +I++ L + LP Y II Sbjct: 217 PKKVAFLDLDAEIE---DYVVKKLYKL--RNILKSDQVEIEIIKPDLNLLKTILPVYEII 271 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 S +EA+SNL+ +G+ +G + E++ TRS GFG ++ R++ G++ L + Sbjct: 272 SYSEATSNLSAINGITFGNTEKNLKWEEIFIRTRSDGFGLMLQKRLIWGSFFLEKDNQEH 331 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +++A+K+RTLIK ++ E+ D+++ P A + E NS I N + ++ Sbjct: 332 FFIKAKKMRTLIK-NYYESILNKFDLVVFPAFYGIAPDIQGE--NSEKSDKITNFILAIS 388 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 N+ G P+IS+P K +P L Sbjct: 389 -NLVGNPSISLPLG-SYKNLPFNL 410 >gi|114707758|ref|ZP_01440652.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fulvimarina pelagi HTCC2506] gi|114536747|gb|EAU39877.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Fulvimarina pelagi HTCC2506] Length = 456 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 150/481 (31%), Positives = 242/481 (50%), Gaps = 41/481 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +S+ D + D+S VE++++ ++ I+ + +NA++ + + AR A ++++ + G Sbjct: 9 LPISKITDAFKRGDLSPVEVLETCLERIKVRDDTLNAFVHL-NENARHQAIKAERAVREG 67 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIPI +KD + T + + A + F P ++S L GA+++GK M Sbjct: 68 TELGPLHGIPIAVKDNYLTAEMPSTAGTSANVDF-PQHDSAAVAALRAAGAILIGKTRMH 126 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G P +P + PGGSSGGS AA+A +C A+ G+DTGGSIR Sbjct: 127 EFAWGMETP-----PARNP-----HDETRVPGGSSGGSGAALAAGMCLAATGSDTGGSIR 176 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS GTVG KPT+G SR GI+ + SLD AG +TR V D+A+L ++G D D Sbjct: 177 IPASLCGTVGFKPTFGMISRSGIVPHSWSLDTAGPLTRCVDDAALLSDVMSGPDPDDLGS 236 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P VG+ + + D L + + + I L AGA+IVE +P Sbjct: 237 STRPAKAIWGTEALPADSFNVGVCRNHFFDALQDDVAGSVESTIELLASAGARIVEFEIP 296 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-GFGQEVKHRIM 364 Y L A + I A +S+ Y ++ L NT S+ F +V+ + Sbjct: 297 DLAYGLGAIFAIELASSSA----YH--QHAL------------NTGSVENFSDDVQLLVE 338 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-S 423 +G R + YL A + RT + R F EA + +DV++ PT P +A+ +G+ E + Sbjct: 339 MG-----ERVRATDYLHAERFRTRLARTFAEAMRE-IDVVVGPTMPVTAWTVGQREVTLA 392 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G + + T N+ GLPAI++P +P+G Q+ G+PF + + + +I+E Sbjct: 393 GQTESVLESAWRLTYPWNLLGLPAITLPCGRDRDGLPIGFQMAGRPFDDARVVTFARIVE 452 Query: 482 K 482 Sbjct: 453 N 453 >gi|15898906|ref|NP_343511.1| amidase [Sulfolobus solfataricus P2] gi|284174218|ref|ZP_06388187.1| amidase [Sulfolobus solfataricus 98/2] gi|2492837|sp|P95896|AMID_SULSO RecName: Full=Amidase gi|1707728|emb|CAA69448.1| amidase [Sulfolobus solfataricus P2] gi|13815415|gb|AAK42301.1| Glutamyl-tRNA amidotransferase, subunit A (gatA-3) [Sulfolobus solfataricus P2] gi|15077241|gb|AAK83092.1| amidase [Sulfolobus solfataricus] gi|261603322|gb|ACX92925.1| Amidase [Sulfolobus solfataricus 98/2] Length = 504 Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 127/425 (29%), Positives = 212/425 (49%), Gaps = 24/425 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD GI S +L+GF PH ++TV ++ D ++ K ++ Sbjct: 88 LKGKRICIKDNVMIAGIPMLNGSKMLEGFVPHMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPT+G G S P+LD G + TV+D A+LL+ IAG DE D+ + Sbjct: 203 VGIYGLKPTHGLVPYTGAFSIEPTLDHLGPMANTVKDVALLLEVIAGRDELDSRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y + +D ++ M VGI KE + +D+ L+D G K+ + S+P Sbjct: 263 PPPVKPYSKLIDGDVKDMKVGIVKEGFNWSNSEKDVDELVLDSAKKLEDYGIKVEDTSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I+ A++ + GV +G + + I + + N +R+ VK Sbjct: 323 LHRMGLDIWTPIAIEGATATMILGSGVGWGRKGLFETQIADFFGNSLKSRARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL----G 417 +M+G Y++ + +Y +AR + ++K + A + D ++ PTTP A G Sbjct: 383 VLMLG-YLMIKMYNNRYYAKARNLSIVLKEAYDSALRK-YDALIMPTTPMKAMRYKSEPG 440 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E ++G I N T ++ G PA+++P +P+GL +IG+ F E+ + + Sbjct: 441 FDEYFIMALGMINN---TAPFDVTGHPAMNIPVGYS-NGLPVGLMIIGRHFEEDKVLKLA 496 Query: 478 QIIEK 482 + E+ Sbjct: 497 NVFER 501 >gi|86610086|ref|YP_478848.1| amidase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558628|gb|ABD03585.1| amidohydrolase, AtzE family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 466 Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 151/481 (31%), Positives = 233/481 (48%), Gaps = 42/481 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING- 66 AVS +R +R +SA +V + ++ I + Q+NA+ V+ + A AAE+ D+++ G Sbjct: 13 AVSIARA-VRQGSVSAQAVVAACLERIRRRDPQLNAFTAVLEESALQAAEQVDRQVAQGI 71 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMD 125 L G+P +K+ F G+ T A S I P + +TV +L GA+++G LNMD Sbjct: 72 PVGPLAGVPFAVKNLFDVAGLTTLAGSAINRENPPAIQDATVAARLKQAGAILVGTLNMD 131 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E+A G E S+YGP +P S SSGGS+AAVAG L ++G+DT GSIR Sbjct: 132 EYAYGFVTENSHYGPTHNPHDLNRSAGG-----SSGGSAAAVAGGLVPLALGSDTNGSIR 186 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G G+KPTYGR SR G+ FA S D G + R+V D A+ + G D D C Sbjct: 187 VPASLCGVYGLKPTYGRLSRAGVALFAASFDHVGPLARSVADIALSFDVMQGPDPQDPVC 246 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV L Q I+G+ + + +Y P I G+ + A + +P Sbjct: 247 TRRPVDPTFGQLGQGIEGLRIAVADDYFARGAEPPI----LAGVEKVAQALGARQTVRIP 302 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 Q A A ++I+ A EG ++ TR F + R + Sbjct: 303 EAQRARAAAFLITAA------------------EGANLHLPNLRTRPHDFDPATRDRFLA 344 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NN 422 G + + S L+A++ R ++ F++ +D+ + PTTP A LG+E+ + Sbjct: 345 GALLPA-----SWILQAQRFRRWYRQQVQAIFQE-IDLFIAPTTPCFAPLLGQEKMVIDG 398 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSVGQIIE 481 + ++T ++ GLP +SVP L E +P G+QL+ P++E L +E Sbjct: 399 VEVLTRPNLGLYTQPLSFIGLPVLSVP--LRESGSLPFGVQLVAAPYQEAKLLRAAAYLE 456 Query: 482 K 482 K Sbjct: 457 K 457 >gi|301629831|ref|XP_002944037.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B-like, partial [Xenopus (Silurana) tropicalis] Length = 773 Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 121/265 (45%), Positives = 158/265 (59%), Gaps = 15/265 (5%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 SAVE+ +++ + + AY+ + A A A D + G A L G+PI KD Sbjct: 24 SAVEVAQHFLERARQHQT-LGAYVAIDADVTLAQARAQDAALAAGTAAPLAGVPIAHKDI 82 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY---- 137 F T+ T A S +L G+R +++TV +L + G V LGKLN DEFAMG +NE S Sbjct: 83 FVTRDFPTSAASRMLAGYRSPFDATVVARLAEAGCVTLGKLNCDEFAMGGTNENSAIPAV 142 Query: 138 ----YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 PV +PW DST PGGSSGGS+ AVA L A+ G+DTGGSIRQPASF G Sbjct: 143 GCDSVQPVRNPW---DSTR--VPGGSSGGSAVAVAARLAPAATGSDTGGSIRQPASFCGI 197 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPD 252 GIKPTYGR SR G+I+FA SLDQAG + R+ D A+LL A+ G D E D+T + P D Sbjct: 198 TGIKPTYGRASRYGMIAFASSLDQAGPMARSAEDCALLLSAMCGPDPERDSTSLERPAED 257 Query: 253 YERALDQSIQGMTVGIPKEYRLDYL 277 + R+L + G+ +GIP E+ D L Sbjct: 258 FSRSLGDPLDGLRIGIPAEFFGDGL 282 >gi|322372030|ref|ZP_08046572.1| amidase [Haladaptatus paucihalophilus DX253] gi|320548452|gb|EFW90124.1| amidase [Haladaptatus paucihalophilus DX253] Length = 515 Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 127/427 (29%), Positives = 210/427 (49%), Gaps = 29/427 (6%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 IG+KD A G+ S + +G+ P ++T+ +L D G + GK+NM++ A S E Sbjct: 99 IGVKDNVAVAGVEMTCGSKLFEGYVPSRDATIVTRLLDAGGTITGKMNMEDMAFSGSGEL 158 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S GPV++P ++ GGSS GS AAV +IG D GGSIR PA+++G VG Sbjct: 159 SATGPVLNPRDP-----EYIAGGSSSGSIAAVVNGDVDVAIGGDQGGSIRIPAAWSGGVG 213 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KPT+G GI S D G + TV D A +L IAG D D + P DY Sbjct: 214 HKPTHGLVPYTGIAGLGRSFDHIGPMATTVGDCARVLDVIAGADSLDPRQGHAPTDDYTN 273 Query: 256 ALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 AL + +T+G+ ++ + + +D+ + + DAGA++ ++S+P + LP + Sbjct: 274 ALTNDPEDLTIGVVEDGFGHEQSESGVDEMVRDALDHFADAGAEVTDVSIPMHRDGLPIW 333 Query: 315 YIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSI---GFGQEVKHRIMIGTYVL 370 I E ++ + DG+ +G ++ + R + + VK +++G Y+ Sbjct: 334 NGIVIEETTATV-NADGIGHFGDGHYDTQFMDAFGKARRVQADDYLTTVKLTLVLGQYLA 392 Query: 371 SSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF----PLGKEENNSGS 425 Y SHY +A+ + + ++ +A VDV+ PTTP +A L + E + Sbjct: 393 DE--YRSHYYAKAQNLSRALADEYDDALAD-VDVLAMPTTPQTAHRQDDDLSRLEVIDRA 449 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + + N T ++ G PA+SVP + +P+GL +G+ F ++T+ VG E+ Sbjct: 450 LNMLSN---TAPFDVTGHPALSVPCGTSD-GLPVGLMFVGERFDDDTVLRVGHTFEQR-- 503 Query: 486 YFRPHKW 492 H W Sbjct: 504 ----HDW 506 >gi|269114818|ref|YP_003302581.1| glutamyl-tRNA(gln)amidotransferase subunit A [Mycoplasma hominis] gi|268322443|emb|CAX37178.1| Glutamyl-tRNA(Gln)amidotransferase subunit A [Mycoplasma hominis ATCC 23114] Length = 442 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 125/409 (30%), Positives = 207/409 (50%), Gaps = 22/409 (5%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD +A + A S L FRP Y+ST+ + L + GA + + N+DEF MG S E S Sbjct: 44 IKDNYADLNVIESASSRFLSNFRPSYQSTILKLLNEAGATCVARTNLDEFCMGGSGEYSC 103 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G + +P S + GGSS G++A + + A IG+DTG S+R+PAS G VG K Sbjct: 104 NGLIKNPLNS-----NYLVGGSSSGAAATFSKNISFA-IGSDTGDSVRKPASNIGEVGFK 157 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPDYERA 256 P+YG SR G+ +FA SLD T V+D+ IL + D + D T V+L Sbjct: 158 PSYGAISRYGLSAFASSLDTVAYFTHNVQDAIILSSVLFKQDLKHDLTSVDLSFN----- 212 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT--QYALPAY 314 D I+ I D L ++ +++ ++ L+ ++V+IS+ Q Y Sbjct: 213 ADSVIETKPHKIAYLDCFDKLDISVADAYKKLLNKLEKMNIELVKISINEKLLQAIDTVY 272 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ +E+SSNLA GV +G R+ G E + +R+ G G+ V+ R+++G+Y L Sbjct: 273 KVIAFSESSSNLANLVGVEFGNRITGNSWEETFNLSRTEGIGKMVQSRMILGSYFLEDNN 332 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 ++++A+K+R + FT + D+ + P + SA +GK S Y D Sbjct: 333 QIKYFVKAKKMRRYLSNYFTNV-HKSADIFIYPASNMSAPLIGKSYEPS------YMDYI 385 Query: 435 TVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLFSVGQIIEK 482 N+ G P++++ + + +P L + G+ +++ + S IE+ Sbjct: 386 LTNSNLTGNPSLTLKLGIDKNNNLPFNLAIDGEIYKDCKMLSHALFIER 434 >gi|317054155|ref|YP_004118180.1| Amidase [Pantoea sp. At-9b] gi|316952150|gb|ADU71624.1| Amidase [Pantoea sp. At-9b] Length = 464 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 145/500 (29%), Positives = 236/500 (47%), Gaps = 49/500 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L++ ++ E ++S +I++V++ + + I+ + Q+++Y ++ A A ++D Sbjct: 1 MNDLHYKSLLEIGRLIQSGEITSVDVTRTLLARIDRLDQQLHSYFYLMRDSALQQAADAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I +G R L G+PI +KD TK T I P +STV ++ GAV+L Sbjct: 61 REIASGTIRGPLHGVPIALKDLIWTKDAPTTHGMIIHKDHYPAEDSTVVERFRAAGAVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVIS----PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 GKL E A + P I+ PW S T G SS GS A A LC + Sbjct: 121 GKLAQTESAFADHH------PEITRPSNPWGSALWT-----GVSSSGSGVATAAGLCFGA 169 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IGTDTGGSIR P++ G GIKPT+ R +R G A SLD G + R+ D+A +L+AI Sbjct: 170 IGTDTGGSIRFPSNANGLTGIKPTWSRVTRHGACELAASLDHIGPMARSAADAAAMLQAI 229 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG DE D T + PVPDY + + I + +G+ K + LD + Q I+ L Sbjct: 230 AGRDEKDPTSSSEPVPDYLALMTRGISKLRIGLDKAWALDKVDDDTRAALQSAIATLSAL 289 Query: 296 GAKIVEISLPHTQYALPAYYIISPAE-ASSNLARYDGVR--YGLRVEGKDILEMYENTRS 352 GA V+I++P T+ A + + E A ++ A Y + YG + G +L++ + + Sbjct: 290 GATFVDITMPDTEKAAAEWSALCAVETALAHEATYPAQKEQYGPGLAG--LLDLGHSVTA 347 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + Y R R ++ D + F VD++L P T + Sbjct: 348 L------------------------EYQRLLLSRAALRGDISALFSN-VDLVLAPATAFA 382 Query: 413 AFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 G+ ++N V +T A + +G P I++P + P+G QL+ F E Sbjct: 383 GLTW-DTMTRFGTDQALFNGVLRYTSAFDASGHPTITLPCGMTAAGAPIGFQLVAAHFAE 441 Query: 471 ETLFSVGQIIEKEAGYFRPH 490 T+ ++ + + H Sbjct: 442 ATMIQGAWAYQQATDWHKKH 461 >gi|119898247|ref|YP_933460.1| amidase [Azoarcus sp. BH72] gi|119670660|emb|CAL94573.1| amidase [Azoarcus sp. BH72] Length = 465 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 152/476 (31%), Positives = 239/476 (50%), Gaps = 56/476 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+++ ++E LR+ DIS + L + I+ +S+++AY V A +A AAA +++ Sbjct: 7 ELHYLEIAELAPLLRAGDISPLALTRHMLARIDALDSRLHAYARVTADEALAAAAQAEAD 66 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L G+P+ +KD F T+G T + +L F P ++TV ++L + GAV+LGK Sbjct: 67 IAAGRYRGPLHGVPVAVKDLFWTRGTVTACGTTVLADFVPDEDATVVRRLREAGAVILGK 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L M E A + + ++PW D +T G SS GS A A LC A++GTDTG Sbjct: 127 LQMTEGAFATPHPD--LAAPLNPW----GADHWT-GASSSGSGVATAAGLCFAALGTDTG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G G+KP +GR SR G+ AP+LD G + R+VRD A++ +AIAG D Sbjct: 180 GSIRFPAAANGLSGLKPGWGRVSRHGVFPLAPTLDHVGPMARSVRDVALMYQAIAGPDPL 239 Query: 242 DATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA----G 296 D T ++ D RA S + G+ VGI + + D G + L++A G Sbjct: 240 DPTSLD----DAPRAAGHSGLAGLRVGIDAAWN----ARGSDAEVLAGCARLREALVAGG 291 Query: 297 AKIVEISLPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 A+IVE+ LP + A+ ++ + A ++ A Y R+ + Sbjct: 292 AEIVELELPESWPIAGAWELLCGVQTAVAHAATYP-------------------ARAADY 332 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ---GVDVILTPTTPTS 412 G + I +G ++ D H RA+ L DF E+ GVD++L P P + Sbjct: 333 GPALARLIEVGR---AAGAMDYH--RAQ----LAALDFGGRLERALAGVDLLLAPVQPFA 383 Query: 413 AFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A P + + FT +N++G P++++P +P+G QLI + Sbjct: 384 A-PTHARLGELAQSPELNQRLIQFTAPLNISGSPSLALPCGSTAAGLPVGCQLIAR 438 >gi|158424247|ref|YP_001525539.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331136|dbj|BAF88621.1| amidase [Azorhizobium caulinodans ORS 571] Length = 477 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 154/487 (31%), Positives = 236/487 (48%), Gaps = 44/487 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L V E +R+ + S VE+ + + IE +S++N++I V A+ A A A + Sbjct: 17 TDLVTAGVLELGRMIRTGETSPVEITKACLSRIERIDSKLNSFITVTAEAALAQAAAVEA 76 Query: 62 RIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G D GIP +KD T G+ + + S I P +TV +KL G +++G Sbjct: 77 ELAAGLDRGPFHGIPYALKDNVDTAGVLSSSHSRIFIDRVPQESATVARKLEAAGGILIG 136 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EFA+G + + P +PW + PGGSS GS AAV G L A+IGTDT Sbjct: 137 KTATFEFAIGGPSFDLPWPPARNPWNP-----DYLPGGSSSGSGAAVGGRLVPAAIGTDT 191 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G G+KPTYGR SR G+ SLD G + R+ D A +L A AGYD Sbjct: 192 GGSIRWPAAMCGITGLKPTYGRISRRGVHPNTFSLDHCGPMARSAADCAAMLGACAGYDP 251 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D ++ PVPDY AL SI+G+ +G+ + + + + + + L+ GA + Sbjct: 252 LDPGSIDAPVPDYTAALTGSIKGLRIGLVRHWYEEEATDEVIAAVDDAVEVLRQLGAVVE 311 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++L + + A IS E V DI R FG+ ++ Sbjct: 312 PLTLDPLRDYVDAKTTISITEL-------------FAVHEADI-----RFRPQDFGRLLR 353 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT-----PTTPTSAFP 415 R+M+G V R D Y++A + R + AF + D+++T P P A P Sbjct: 354 SRVMVGGLV---RAED--YVQAMRWRAELSTRMMAAFSR-YDLLVTAGWMAPADP--AVP 405 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G + + T+ ++AGLPA+++P K +PL LQ+ G+PF E T+ Sbjct: 406 DGVDFFKK-------RQLVTMPFSLAGLPALALPCGFSSKGLPLSLQIAGRPFDEATVLR 458 Query: 476 VGQIIEK 482 G ++ Sbjct: 459 AGDAYQQ 465 >gi|90417949|ref|ZP_01225861.1| putative amidase [Aurantimonas manganoxydans SI85-9A1] gi|90337621|gb|EAS51272.1| putative amidase [Aurantimonas manganoxydans SI85-9A1] Length = 457 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 149/481 (30%), Positives = 235/481 (48%), Gaps = 39/481 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +R +S V+LV + + I + + +++ + A A A+ +++ + +G A Sbjct: 11 IGEVARAIRDARLSPVDLVGACLDRIATRDGTLQSFVHL-AGDALDQAKAAERSVRDGRA 69 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI +KD + T + T A + F P E +L GA+++GK M EF Sbjct: 70 LGPLHGIPIAVKDNYLTADMPTTAGTDAEIAF-PKEEGAAIARLGKAGAILIGKTRMHEF 128 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G P +P ++ PGGSSGGS AAVA C A+ G+DTGGSIR P Sbjct: 129 AWGMETP-----PTRNP-----HDERRVPGGSSGGSGAAVAAGFCLAATGSDTGGSIRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS GTVG KPT+GR R GI+ + SLD AG +TR V D+A+L+ ++G+D DA N Sbjct: 179 ASLCGTVGFKPTFGRIGRSGIVPHSWSLDHAGPLTRNVADAALLVDVMSGHDPHDAASAN 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P D + + VG+ + + + + + + + I L AG +IVE +P Sbjct: 239 EPPTDLASLAAAPVARLRVGVCRNHFFEAVDSEVAASVEAVIERLAAAGTQIVEFEVPEL 298 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + L A + I E SS+ A + L + + ++V+ + +G Sbjct: 299 AHGLGAIFAI---ELSSSTAYH--------------LPHLASGDVDDYSEDVRLLVEMGR 341 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 V S YL+A + R L+ F F++ VDV++ PT P +A+ +G+ E G Sbjct: 342 LVTG-----SDYLQAERYRRLLAGKFQTVFDR-VDVVVGPTMPITAWEIGQREVVLGGRR 395 Query: 428 HIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + FT N+ GLPAIS+P + +P+G Q+ G F E ++ +E+ Sbjct: 396 ESVLETSWRFTYPWNLLGLPAISLPCGDDSRGLPIGFQIAGAAFDEASVVRAAAAVEQSL 455 Query: 485 G 485 G Sbjct: 456 G 456 >gi|323473832|gb|ADX84438.1| Amidase [Sulfolobus islandicus REY15A] Length = 504 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/426 (30%), Positives = 213/426 (50%), Gaps = 26/426 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LKGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TVRD A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVRDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VGI KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDGEIKGIKVGIVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +M+G +++ R Y++ +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLGYFMI--REYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEP 439 Query: 420 ---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 440 SFDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYS-NGLPVGLMIVGSYFEEDKILKI 495 Query: 477 GQIIEK 482 + E+ Sbjct: 496 ANMFER 501 >gi|323476484|gb|ADX81722.1| Amidase [Sulfolobus islandicus HVE10/4] Length = 504 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/426 (30%), Positives = 213/426 (50%), Gaps = 26/426 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LKGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TVRD A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVRDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VGI KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDGEIKGIKVGIVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +M+G +++ R Y++ +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLGYFMI--REYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEP 439 Query: 420 ---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 440 SFDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYS-NGLPVGLMIVGSYFEEDKILKI 495 Query: 477 GQIIEK 482 + E+ Sbjct: 496 ANMFER 501 >gi|229578166|ref|YP_002836564.1| amidase [Sulfolobus islandicus Y.G.57.14] gi|228008880|gb|ACP44642.1| Amidase [Sulfolobus islandicus Y.G.57.14] Length = 504 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/425 (29%), Positives = 210/425 (49%), Gaps = 24/425 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LKGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TV+D A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVKDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VGI KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDSEIKGIKVGIVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-- 419 +M+G Y + + + +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLG-YFMIRKYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEPS 440 Query: 420 --ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 441 FDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYS-NGLPVGLMIVGSYFEEDKILKIA 496 Query: 478 QIIEK 482 + E+ Sbjct: 497 NMFER 501 >gi|229583136|ref|YP_002841535.1| amidase [Sulfolobus islandicus Y.N.15.51] gi|228013852|gb|ACP49613.1| Amidase [Sulfolobus islandicus Y.N.15.51] Length = 504 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 127/425 (29%), Positives = 210/425 (49%), Gaps = 24/425 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LKGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TV+D A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVKDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VGI KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDSEIKGIKVGIVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-- 419 +M+G Y + + + +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLG-YFMIRKYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEPS 440 Query: 420 --ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 441 FDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYS-NGLPVGLMIVGSYFEEDKILKIA 496 Query: 478 QIIEK 482 + E+ Sbjct: 497 NMFER 501 >gi|17228513|ref|NP_485061.1| amidase [Nostoc sp. PCC 7120] gi|17130364|dbj|BAB72975.1| Glu-tRNA(Gln) amidotransferase subunit A [Nostoc sp. PCC 7120] Length = 464 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 143/481 (29%), Positives = 227/481 (47%), Gaps = 40/481 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 AVS ++ +R ++AVE+ + + I + ++N + V + A A A DK + G+ Sbjct: 4 AVSTAK-AIREGKVTAVEVTQAALARIAAQDVELNCFTAVTRETALADAARIDKEMAAGN 62 Query: 68 ARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P +K+ F G+ T A + I P ++T KL GAV++G LNMD Sbjct: 63 SPGLLAGVPFAVKNLFDIAGLTTLAGAKINAENPPASRDATAVAKLKQAGAVLVGALNMD 122 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E+A G E S+YG +P + + + GGS+ +A + F S+G+DT GSIR Sbjct: 123 EYAYGFVTENSHYGATHNP-QDLQRVAGGSSGGSAAAVAAGLVTF----SLGSDTNGSIR 177 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G G KPTYGR SR G+ F+ S D G R+V D A + + G D+ D C Sbjct: 178 VPAALCGVFGFKPTYGRLSRAGVALFSSSFDHIGPFARSVGDIATIFDILQGEDDRDPIC 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P L+Q I + + I DY + + +A ++LP Sbjct: 238 TQRPANPTLPQLNQDISHIRIAIAD----DYFQKGATSAALAAVQEVANALNVTNYVTLP 293 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A A ++I+ +E +NL D +R TR F + R + Sbjct: 294 EAHRARAAAFVITASE-GANL-HLDKLR----------------TRPQDFDPATRDRFLA 335 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NN 422 G + S + Y++A++ R + E F Q VDVIL PTTP +A +G++ + Sbjct: 336 GALIPS-----NWYIQAQRFRQWYRDRIREVF-QNVDVILAPTTPITAPLIGQQTMILDG 389 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + +FT ++ GLP +SVP C +PLG+QLI P+ E + V ++E Sbjct: 390 EEILVRPHLGLFTQPLSFIGLPVLSVPIQ-CPNALPLGVQLIAAPYNEALILQVAAVLEA 448 Query: 483 E 483 + Sbjct: 449 Q 449 >gi|144575243|gb|AAZ53405.2| glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyopneumoniae 7448] Length = 439 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 128/384 (33%), Positives = 200/384 (52%), Gaps = 17/384 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FAT + A S L F+P Y +TV QKL + GA L K++ DE +G S Sbjct: 44 IKSNFATTEGVSHASSISLLNFKPSYNATVFQKLINAGAQPLVKVHNDELGLGGKGLFSA 103 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +++ S+D T GGSS GS+A + +IG+DTG SIR+PASF G VG K Sbjct: 104 FGKIVN---SLDKTK--LIGGSSSGSAATIN--FVHFAIGSDTGDSIRRPASFIGKVGFK 156 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG SR G+ +A SLD +T V DS ++ + + G DE D T V + V + E+ Sbjct: 157 PSYGAVSRYGLFPYATSLDTVAWLTHNVLDSILVSQVVFGSDENDLTSVEIDVKNVEKTK 216 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + + E DY+ + K + I +I++ L + LP Y II Sbjct: 217 PKKVAFLDFDAEIE---DYVVKKLYKL--RNILKSDQVEIEIIKPDLNLLKTILPVYEII 271 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 S +EA+SNL+ +G+ +G + E++ TRS GFG ++ R++ G++ L + Sbjct: 272 SYSEATSNLSAINGITFGNTEKNLKWEEIFIRTRSDGFGLMLQKRLIWGSFFLEKDNQEH 331 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +++A+K RTLIK ++ E+ D+++ P A + E NS I N + ++ Sbjct: 332 FFIKAKKTRTLIK-NYYESILNKFDLVVFPAFYGIAPDIQGE--NSEKSDKITNFILAIS 388 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 N+ G P+IS+P K +P L Sbjct: 389 -NLVGNPSISLPLG-SYKNLPFNL 410 >gi|91978753|ref|YP_571412.1| amidase [Rhodopseudomonas palustris BisB5] gi|91685209|gb|ABE41511.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 466 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 140/496 (28%), Positives = 225/496 (45%), Gaps = 43/496 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L++ + E +++ +S VE+ + +Q IE + ++ +Y V + A A ++K Sbjct: 4 TDLHYRGLVEVGREIQANKLSPVEVTKAMLQRIEKLDGKLKSYAYVTPELALEEAASAEK 63 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G + L G+PI +KD KG+ I +RP ++TV +L + GA++LG Sbjct: 64 EIAAGKVKGPLHGVPIAVKDLCWVKGVPAAHGMTIHRDYRPSEDATVVARLKNAGAIILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL E A ++ P +PW D+ G SS GS +A A LC S+GTDT Sbjct: 124 KLQQTEGAY--ADHHPKIDPPKNPW-----NDELWSGVSSSGSGSATAAGLCFGSLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G G+KPT+GR SR G A +LD G + R+ D +L IAG D Sbjct: 177 GGSIRFPSAANGVTGLKPTWGRVSRYGAYELAATLDHIGPMARSAIDCGAMLSVIAGADP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V LPVP+Y L ++GM +G+ + + + K ++ + KD GA I Sbjct: 237 KDTTAVPLPVPNYVANLPGDLKGMVIGVDRRWTSEGTDEAATKVFEDALRVAKDLGATIT 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---RSIGFGQ 357 EI P Q ++ + G + +E+T R +G Sbjct: 297 EIVFPDAQAVTDDWFPLC---------------------GIETAVAHEHTYPSRKDEYGP 335 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + I +G S Y LR R ++ F + VD+I P ++A L Sbjct: 336 GLAGLIELGRQ-QSGMDYQKIVLRREAFRGAVRAVF-----ETVDLIAIPAQASAAPTLA 389 Query: 418 KEE---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++ +G + FT +M G P I++P P+G Q +G+ F E L Sbjct: 390 RMAALGEDASLIGGLLR--FTCPFDMTGSPTITLPGGFAPNGGPIGFQFVGRHFDEARLV 447 Query: 475 SVGQIIEKEAGYFRPH 490 + G ++ + H Sbjct: 448 AAGDAFQRVTDWHTRH 463 >gi|238618847|ref|YP_002913672.1| amidase [Sulfolobus islandicus M.16.4] gi|238379916|gb|ACR41004.1| Amidase [Sulfolobus islandicus M.16.4] Length = 504 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 129/426 (30%), Positives = 212/426 (49%), Gaps = 26/426 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LRGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TVRD A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVRDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VGI KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDGEIKGIKVGIVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +M+G +++ R Y++ +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLGYFMI--REYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEP 439 Query: 420 ---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 440 SFDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYS-NGLPVGLMIVGSYFEEDKILKI 495 Query: 477 GQIIEK 482 + E+ Sbjct: 496 ANMFER 501 >gi|72080370|ref|YP_287428.1| amidase [Mycoplasma hyopneumoniae 7448] Length = 440 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 128/384 (33%), Positives = 200/384 (52%), Gaps = 17/384 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FAT + A S L F+P Y +TV QKL + GA L K++ DE +G S Sbjct: 45 IKSNFATTEGVSHASSISLLNFKPSYNATVFQKLINAGAQPLVKVHNDELGLGGKGLFSA 104 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +++ S+D T GGSS GS+A + +IG+DTG SIR+PASF G VG K Sbjct: 105 FGKIVN---SLDKTK--LIGGSSSGSAATIN--FVHFAIGSDTGDSIRRPASFIGKVGFK 157 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG SR G+ +A SLD +T V DS ++ + + G DE D T V + V + E+ Sbjct: 158 PSYGAVSRYGLFPYATSLDTVAWLTHNVLDSILVSQVVFGSDENDLTSVEIDVKNVEKTK 217 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + + + E DY+ + K + I +I++ L + LP Y II Sbjct: 218 PKKVAFLDFDAEIE---DYVVKKLYKL--RNILKSDQVEIEIIKPDLNLLKTILPVYEII 272 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 S +EA+SNL+ +G+ +G + E++ TRS GFG ++ R++ G++ L + Sbjct: 273 SYSEATSNLSAINGITFGNTEKNLKWEEIFIRTRSDGFGLMLQKRLIWGSFFLEKDNQEH 332 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 +++A+K RTLIK ++ E+ D+++ P A + E NS I N + ++ Sbjct: 333 FFIKAKKTRTLIK-NYYESILNKFDLVVFPAFYGIAPDIQGE--NSEKSDKITNFILAIS 389 Query: 438 VNMAGLPAISVPAALCEKKMPLGL 461 N+ G P+IS+P K +P L Sbjct: 390 -NLVGNPSISLPLG-SYKNLPFNL 411 >gi|119491326|ref|ZP_01623380.1| amidase [Lyngbya sp. PCC 8106] gi|119453490|gb|EAW34652.1| amidase [Lyngbya sp. PCC 8106] Length = 464 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 149/478 (31%), Positives = 235/478 (49%), Gaps = 49/478 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +RS ISA E+ + I N +N + +++++A A A+ D+ I G D L G+ Sbjct: 17 VRSGHISAQEVCQQTLSEITQQNPTLNCFTTILSEQAIAQAKTLDQAIAKGQDPGPLTGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ F GI T A S I P + +T Q+L GA+++G LNMDE+A G Sbjct: 77 PFAVKNLFDIAGITTLAGSKINRENPPATQDATAIQRLKQAGAILVGALNMDEYAYGFVT 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E +YG +P GGSSGGS+AAVA L ++GTDT GSIR PAS G Sbjct: 137 ENHHYGATPNP-----HDLSLISGGSSGGSAAAVAANLVPFTLGTDTNGSIRVPASLCGV 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G KPTYGR SR G+I F+ SLD G + R++RD A + + G D+ D C Sbjct: 192 FGFKPTYGRLSRGGVILFSSSLDHIGPLARSLRDIATVYDILQGEDKHDPVCT------- 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS----LPHTQY 309 +R+ S+ + GI K ++ L + W+ + + AK + ++ +P Sbjct: 245 KRSPQLSLPELETGI-KNVKIAVLGGYFSEAWEPEVLEVVSQVAKALNVTQQMIIPEAHR 303 Query: 310 ALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A A Y+I+ E S+ +LA LR +D F + R + G Sbjct: 304 AKAAAYLITACEGSNLHLA-------NLRSRPQD------------FDPATRDRFLAGAL 344 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + + + Y +A++ R ++ E F Q VD++L PTTP A +G+E+ N + Sbjct: 345 IPA-----TWYNQAQRFRRWYQQQVRETFRQ-VDILLAPTTPCVAPKIGQEKMNIDGVEL 398 Query: 429 IYND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ++T ++ GLP +SVP ++PLG+Q+I P+ E + + + +E + Sbjct: 399 LVRPNLGLYTQPLSFVGLPVLSVPVKR-SGQLPLGVQIIAAPYNEALILRIAKRLEAQ 455 >gi|227829384|ref|YP_002831163.1| amidase [Sulfolobus islandicus L.S.2.15] gi|284996752|ref|YP_003418519.1| hypothetical protein LD85_0360 [Sulfolobus islandicus L.D.8.5] gi|227455831|gb|ACP34518.1| Amidase [Sulfolobus islandicus L.S.2.15] gi|284444647|gb|ADB86149.1| hypothetical protein LD85_0360 [Sulfolobus islandicus L.D.8.5] Length = 504 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 127/425 (29%), Positives = 210/425 (49%), Gaps = 24/425 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LKGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TV+D A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVKDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VGI KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDGEIKGIKVGIVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-- 419 +M+G Y + + + +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLG-YFMIRKYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEPS 440 Query: 420 --ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 441 FDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYS-NGLPVGLMIVGSYFEEDKILKIA 496 Query: 478 QIIEK 482 + E+ Sbjct: 497 NMFER 501 >gi|332710185|ref|ZP_08430138.1| amidohydrolase, AtzE family [Lyngbya majuscula 3L] gi|332351143|gb|EGJ30730.1| amidohydrolase, AtzE family [Lyngbya majuscula 3L] Length = 464 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 155/477 (32%), Positives = 231/477 (48%), Gaps = 47/477 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 +R ++A ++ + ++ I N +N + V +A + AEE D I G+ L G+ Sbjct: 17 IREGQVTAKTVITNCLEKITVRNQSLNCFTTVTTDQALSDAEEIDHAIAKGNNPGPLAGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ + G+ T A S I P ++T KL GA+++G LNMDE+A G Sbjct: 77 PFAVKNLYDIAGLITLAGSKINAENPPVSRDATAVTKLKQAGAILVGALNMDEYAYGFVT 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YG +P D T GSSGGS+AAVA L ++G+DT GSIR PA+ GT Sbjct: 137 ENSHYGATHNPH---DLTRIAG--GSSGGSAAAVAAGLVPITLGSDTNGSIRVPAALCGT 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN----LP 249 G+KPTYGR SR G+ F+ SLD G R+VRD A + G D D C N L Sbjct: 192 FGLKPTYGRLSRAGVFLFSASLDHIGPFARSVRDIATTFDILQGADPADPVCSNRLPELC 251 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VP L++ I+G+ +G+ Y P + + S L D A +++P + Sbjct: 252 VPH----LNEGIEGLRIGVADGYFAQGAEPEVLDAVAKVASSL-DVTAS---VTIPEAKR 303 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A A YII+ A SNL D +R R F + R + G + Sbjct: 304 ARAAAYIIT-ANEGSNL-HLDNLR----------------KRPDDFDPATRVRFLAGALI 345 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + Y++A++ R + E F Q VD+IL PTTP A LG+E+ + Sbjct: 346 PG-----TWYIQAQRFRQWFRDRIREVF-QNVDIILAPTTPCVAPLLGQEKMVIAGEEVL 399 Query: 430 YND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +FT ++ GLP +SVP +MPLG+Q+I P+ E + V ++E++ Sbjct: 400 VRPNLGLFTQPLSFIGLPVLSVPIHR-PGQMPLGVQIIAAPYHEAMILRVAAVLEEQ 455 >gi|170695011|ref|ZP_02886160.1| Amidase [Burkholderia graminis C4D1M] gi|170140109|gb|EDT08288.1| Amidase [Burkholderia graminis C4D1M] Length = 490 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 141/468 (30%), Positives = 217/468 (46%), Gaps = 53/468 (11%) Query: 39 SQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG 98 + +NA+I V KA +AA +DK + G R L G+PIG+KD + T + T + + Sbjct: 54 ASLNAFITVDDDKALSAARAADKARLAGKRRALPGLPIGVKDSYLTMDLPTSFGTAVARD 113 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 F+P ++ V + D G V+LGK N+ E + G + +YG +P+ + T GG Sbjct: 114 FKPATDAKVVTAMKDAGCVVLGKNNLVEMSYGLTGLNGHYGQAKNPYNVLHIT-----GG 168 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SS G +A+VA L A++G DT GSIR PA+ G VG KPT GR S G+ + +LD Sbjct: 169 SSCGGAASVAARLVPAALGGDTVGSIRVPAALCGVVGFKPTPGRWSGSGVAPISNTLDTT 228 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 G I R V D +L G N P + L S++G + + + Y LD Sbjct: 229 GPIARRVSDCDLLDSIATG---------NYSSP---QRLQASLKGTRLAVARHYYLDGAD 276 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISL-----PHTQYALPAYYIISPAEASSNLAR----- 328 ++K + IS LKDAGA ++E+ L P + A A + + R Sbjct: 277 AEVEKVFNDTISKLKDAGASVLEVDLGTDFGPMVEEANWALFFHDTQPDVTAFLRDQKIP 336 Query: 329 --YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR-IMIGTYVLSSRCYDSHYLRARKI 385 ++ + GL K + + T G+ ++V ++ + R +DS Sbjct: 337 LTFEEIYDGLESHIKTRWQRFVLTTGAGYTEDVAYKDALFRRRPEVRRRFDSQV------ 390 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMA 441 F+ A D I+ PTT +A P E+ G NDVF T + A Sbjct: 391 -------FSRA-----DAIVFPTTLCAA-PTIAEQWQYTVAGRTVNDVFLSRNTYPASFA 437 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 GLP IS+P L E +PLG +L ++ L ++ + +E+ G+ RP Sbjct: 438 GLPGISIPMGLTENGLPLGFELDASSGSDKALLTLARRVEQVIGFVRP 485 >gi|167572924|ref|ZP_02365798.1| glutamyl-tRNA, putative [Burkholderia oklahomensis C6786] Length = 472 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 146/497 (29%), Positives = 231/497 (46%), Gaps = 45/497 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ F+ V++ +LR + IS VEL + + I+ + +NAYI V A A +++ Sbjct: 6 EVAFLDVAQVSAQLRLRRISPVELTHTMLARIKALDPILNAYICVTEATALEEANRAERE 65 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + +G R L G+PI +KD F KG+ T A I ++TV ++L D GAV+LGK Sbjct: 66 LADGKDRGPLHGVPIAVKDIFDMKGVPTTAGMSIRGDTIATEDATVIRRLRDAGAVILGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L M E A + P +P S + + PG SS GS AV+ LC A++ ++TG Sbjct: 126 LAMTEGAYAE-----HRAPFPTPRNSWHAA--YWPGASSSGSGVAVSAGLCYAALASETG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G IKPT+GR SR A +LD G+I R+ D+A +L+ IAG D Sbjct: 179 GSIRLPAAANGVTAIKPTWGRVSRNRTFELAATLDHVGVIARSAADAATVLQIIAGPDPA 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T P L +++G+ +G+ + + +L + I+ L+D GA+IVE Sbjct: 239 DPTTSPRAAPHVATELRSNLKGVRLGVDESWLGAHLDDATTRAMSDAIAALRDPGAQIVE 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ++LP + ++ + + + LA E +R +GQ + Sbjct: 299 VALPDVNEMIWDWFPVCAVQTA--LAH----------------EATYPSRKNEYGQSLAM 340 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 I G LS + Y R + R +R+ F+ V+ + P P + + Sbjct: 341 LIEQG-RALSG----TEYHRLLQRRQAFRREVLSVFD-CVNFVALPVLPAGVPTIER--- 391 Query: 422 NSGSMGHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 M I +D+ FT NMA +P++ +P +PL QLIG PF E L + Sbjct: 392 ----MSKIDDDLIADIHRFTCPFNMASVPSVLLPCGASANGLPLVFQLIGAPFDEAALVN 447 Query: 476 VGQIIEKEAGYFRPHKW 492 + + H + Sbjct: 448 AADAYQHVTTWHARHPF 464 >gi|227826751|ref|YP_002828530.1| amidase [Sulfolobus islandicus M.14.25] gi|227458546|gb|ACP37232.1| Amidase [Sulfolobus islandicus M.14.25] Length = 504 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 128/426 (30%), Positives = 212/426 (49%), Gaps = 26/426 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LRGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TVRD A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVRDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VG+ KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDGEIKGIKVGLVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +M+G +++ R Y++ +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLGYFMI--REYNNRYYAKARNLSIMLKEAYDEALRK-YDALIIPTTPMKAMRYRSEP 439 Query: 420 ---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 440 SFDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYSH-GLPVGLMIVGSYFEEDKILKI 495 Query: 477 GQIIEK 482 + E+ Sbjct: 496 ANMFER 501 >gi|229583915|ref|YP_002842416.1| amidase [Sulfolobus islandicus M.16.27] gi|228018964|gb|ACP54371.1| Amidase [Sulfolobus islandicus M.16.27] Length = 504 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 128/426 (30%), Positives = 212/426 (49%), Gaps = 26/426 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD GI S +L+GF P+ ++TV ++ D ++ K ++ Sbjct: 88 LRGKRICIKDNVMVAGIPMLNGSKMLEGFVPNMDATVVSRILDEAGEIVAKTTCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TSY PV++P ++ GGSS GS+ AVA C ++G D GGSIR P+S+ Sbjct: 148 GGSHTSYPWPVLNP-----RNPEYMAGGSSSGSAVAVASGYCDMAVGGDQGGSIRIPSSW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA----TCV 246 G G+KPTYG G S P+LD G + TVRD A+LL+ IAG D D + Sbjct: 203 VGIYGLKPTYGLVPYTGAFSIEPTLDHLGPMANTVRDIALLLEVIAGRDGLDPRQPDSLP 262 Query: 247 NLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PV Y +D I+G+ VG+ KE + +D+ L+D G K+ E+S+P Sbjct: 263 QPPVKPYLNLIDGEIKGIKVGLVKEGFNWPNSEKDVDELVLDSAKKLEDYGIKVEEVSIP 322 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN---TRSIGFGQEVKH 361 + L + I A++ + G+ +G + + I +++ N +++ VK Sbjct: 323 LHRMGLDIWTPIGIEGATATMILGSGLGWGRKGLFETQIADLFGNSLKSKARDLPNTVKG 382 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +M+G +++ R Y++ +Y +AR + ++K + EA + D ++ PTTP A E Sbjct: 383 VLMLGYFMI--REYNNRYYAKARNLSIMLKEAYDEALRK-YDALIMPTTPMKAMRYRSEP 439 Query: 420 ---ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++G I N T ++ G PA++VP +P+GL ++G F E+ + + Sbjct: 440 SFDEYFIMALGMINN---TAPYDVTGHPAMNVPVGYSH-GLPVGLMIVGSYFEEDKILKI 495 Query: 477 GQIIEK 482 + E+ Sbjct: 496 ANMFER 501 >gi|55981766|ref|YP_145063.1| amidase [Thermus thermophilus HB8] gi|55773179|dbj|BAD71620.1| probable amidase [Thermus thermophilus HB8] Length = 434 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 144/475 (30%), Positives = 230/475 (48%), Gaps = 60/475 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 R+ ++ +E +A ++ N+ E ++A A EE + + G L G+P+ Sbjct: 14 RTTPLALLEEALERAKAFQDRNALAYLDEEAARKEALALTEELRRGQVRGP---LHGLPL 70 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F KG+ T+A + P E+ ++L + GA++ K NM E A+G + E Sbjct: 71 TVKDLFPVKGMPTRAGTKAPLPPLPE-EARAVRRLREAGALLFAKTNMHEIALGITGENP 129 Query: 137 YYGPV---ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + GPV + P R GGSSGGS+ AVA + AS+GTDTGGSIR PA F G Sbjct: 130 WTGPVRNAVDPSRQA--------GGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGFNGV 181 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP+YGR S G + + S D AG +TR+VRD+ L + +AG ++P+ Sbjct: 182 VGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGE--------SIPL--- 230 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + +Q G+P ++ L + K + + + L A++ E+SLP L Sbjct: 231 -----EGVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-----LEG 280 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y E + L RY+ R+ K + E E GF +V+ ++ G + Sbjct: 281 VY-----EVYTRLVRYEAA----RIHEKALKEHPE-----GFSPQVREALLAGLAL---- 322 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN--NSGSMGHIYN 431 + Y A R ++ + +A +GVD +L P P A PLG EE SG GH Sbjct: 323 -TEKDYRDAVAEREALRLELVKAL-RGVDALLLPVQPLPAPPLGTEEVELESGRKGHREA 380 Query: 432 DV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + T+ ++ G+P +++P A E MP+GLQ++G + + ++G +E G Sbjct: 381 FITLTLPFSLLGVPTLALPFAKVE-GMPVGLQVVGAYGEDGKVLALGGWLEARLG 434 >gi|46199748|ref|YP_005415.1| amidase/amidotransferase [Thermus thermophilus HB27] gi|46197374|gb|AAS81788.1| amidase/amidotransferase [Thermus thermophilus HB27] Length = 434 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 144/475 (30%), Positives = 230/475 (48%), Gaps = 60/475 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 R+ ++ +E +A ++ N+ E ++A A EE + + G L G+P+ Sbjct: 14 RTTPLALLEEALERAKAFQDRNALAYLDEEAARKEALALTEELRRGQVRGP---LHGLPL 70 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F KG+ T+A + P E+ ++L + GA++ K NM E A+G + E Sbjct: 71 TVKDLFPVKGMPTRAGTKAPLPPLPE-EARAVRRLREAGALLFAKTNMHEIALGITGENP 129 Query: 137 YYGPV---ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + GPV + P R GGSSGGS+ AVA + AS+GTDTGGSIR PA F G Sbjct: 130 WTGPVRNAVDPSRQA--------GGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGFNGV 181 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP+YGR S G + + S D AG +TR+VRD+ L + +AG ++P+ Sbjct: 182 VGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGE--------SIPL--- 230 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + +Q G+P ++ L + K + + + L A++ E+SLP L Sbjct: 231 -----EGVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-----LEG 280 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y E + L RY+ R+ K + E E GF +V+ ++ G + Sbjct: 281 VY-----EVYTRLVRYEAA----RIHEKALKEHPE-----GFSPQVREALLAGLAL---- 322 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN--NSGSMGHIYN 431 + Y A R ++ + +A +GVD +L P P A PLG EE SG GH Sbjct: 323 -TEKDYRDAVAEREALRLELVKAL-RGVDALLLPVHPLPAPPLGTEEVELESGRKGHREA 380 Query: 432 DV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + T+ ++ G+P +++P A E MP+GLQ++G + + ++G +E G Sbjct: 381 FITLTLPFSLLGVPTLALPFAKVE-GMPVGLQVVGAYGEDGKVLALGGWLEARLG 434 >gi|146341325|ref|YP_001206373.1| putative amidase [Bradyrhizobium sp. ORS278] gi|146194131|emb|CAL78150.1| putative amidase [Bradyrhizobium sp. ORS278] Length = 466 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 144/496 (29%), Positives = 235/496 (47%), Gaps = 43/496 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+++ + + ++++K++S VE+ + ++ IE + Q+ ++ V+A A A A ++K Sbjct: 4 TDLHYLGLVDVGRKIQAKELSPVEVTKAMLERIEKLDGQLKSFAYVMADSAVADAAAAEK 63 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I +G R L G+P+ +KD KG I FRP+ ++TV +L GAV+LG Sbjct: 64 EIASGKIRGPLHGVPVAVKDLCWAKGAPAAHGMTIHRDFRPNEDATVVARLKAAGAVILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL E A ++ P +PW + PG SS GS AA A LC S+GTDT Sbjct: 124 KLQQTEGAY--ADHHPKIDPPKNPWNA-----DLWPGASSSGSGAATAAGLCFGSLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P++ G G+KPT+GR SR G A +LD G + R+ D +L IAG D Sbjct: 177 GGSIRFPSAANGVTGLKPTWGRVSRYGAFELAATLDHIGPMARSAADCGAVLGVIAGQDP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T V LPVPDY +L ++G+T+GI + + + + + D GA+I Sbjct: 237 RDTTAVPLPVPDYLASLSGDLRGVTIGIDRRWTSEGTDSDTANVLTEALRVAVDLGAQIK 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---RSIGFGQ 357 EI+ P +Q + ++ + EA+ +ENT R +G Sbjct: 297 EINFPDSQAVIDDWFPLCGIEAAV---------------------AHENTYPARKDEYGP 335 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + + +G + S Y LR R ++ F + VD++ P +A L Sbjct: 336 GLAGLLDLG-HQQSGMDYQKIVLRREAFRGAVRVLF-----ETVDLLAVPAQAFAAPSLA 389 Query: 418 KEEN---NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 K ++ +G + FT +M G P +++P P+G Q +G+ F E L Sbjct: 390 KMATLGEDASLIGGLLR--FTCPFDMTGSPTVTLPGGFAANGGPVGFQFVGRHFDEAGLV 447 Query: 475 SVGQIIEKEAGYFRPH 490 G ++ + + H Sbjct: 448 RAGDAFQRATDWHKRH 463 >gi|119474686|ref|ZP_01615039.1| glutamyl-tRNA, putative [marine gamma proteobacterium HTCC2143] gi|119450889|gb|EAW32122.1| glutamyl-tRNA, putative [marine gamma proteobacterium HTCC2143] Length = 460 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 150/491 (30%), Positives = 236/491 (48%), Gaps = 44/491 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+ ++ S ++ S+ IS+VE+ + I+ + S + A++ V A++A A A +D Sbjct: 1 MSDFYYLDASTIAKKIHSRAISSVEVTQQLLTRIK-ALSHLGAFVTVTAERALADAARAD 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I G R L G+PI KD AT+G+ T + + I + P +++TV +L GAVML Sbjct: 60 REIAAGTIRSALHGVPIAYKDLLATQGVTTTSGTAIYADYVPDFDATVVARLQAAGAVML 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVI----SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 GKL + E A + P + +PW D G SS GS A A LC AS Sbjct: 120 GKLKLTEGAFAK------HHPAVDVPKNPW-----NDDLWTGVSSSGSGVATASGLCFAS 168 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDTGGSIR P++ G VG+KPT+GR SR G A SLD G +TR+V D+A +L I Sbjct: 169 LGTDTGGSIRFPSAANGIVGLKPTWGRVSRYGAFPLAYSLDHIGPMTRSVTDAAAMLHII 228 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG D D T PV DY + ++ + +G+ Y + +P + ++ L+ Sbjct: 229 AGVDIKDPTSSAAPVADYLAPSGRDLRSLKIGVDANYNDEDTAPEHVAAVHEVLAVLQSR 288 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G KIV I +P A+ ++I+ A +++ R + + RS + Sbjct: 289 GCKIVPIVMP--WRAVSKNWVITTAVEAAHAHR----------------DSFPERRS-EY 329 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G + + +G V S+ Y L R + ++ F+ D+I++P+ P Sbjct: 330 GS-LADLLDLGLSV-SAESYMLVELERRNLIAQLRGIFSR-----CDLIVSPSMLLYGPP 382 Query: 416 -LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G + S N FT + +G P +S+P + +P +QLIG E L Sbjct: 383 NEGSVKMESAEADRAANLKFTAPFDYSGSPTLSIPWRSADGAVPASVQLIGPELGEHLLI 442 Query: 475 SVGQIIEKEAG 485 VG+ +E G Sbjct: 443 DVGRELEAARG 453 >gi|186682798|ref|YP_001865994.1| amidase [Nostoc punctiforme PCC 73102] gi|186465250|gb|ACC81051.1| Amidase [Nostoc punctiforme PCC 73102] Length = 468 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 148/471 (31%), Positives = 221/471 (46%), Gaps = 32/471 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R +SAVE+ + + I N N + + A+ A A D+ I G+ L G+ Sbjct: 15 VREGKVSAVEVTKAALARIATRNHLFNCFTAITAETALTDAARIDREITQGNNPGTLAGV 74 Query: 75 PIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ F G+ T A S I D ++T KL GAV++G LNMDE+A G Sbjct: 75 PFAVKNLFDIAGLTTLAGSKINADNPAATQDATAIAKLKQAGAVLVGALNMDEYAYGFVT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YG +P SSGGS+AAVA L ++G+DT GSIR PA+ G Sbjct: 135 ENSHYGATHNPHDLQRVAGG-----SSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCGV 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPTYGR SR G+ F+ S D G R+V+D A + + G D+ D C P Sbjct: 190 FGLKPTYGRLSRAGVALFSSSFDHIGPFARSVQDIATVFDVLQGEDDRDPICTKRPPELV 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L Q I + + I DY + + + + DA +++P A A Sbjct: 250 LPQLKQDISDIRIAIAA----DYFTKGAEPEALAAVQKVADALNVTEYVTIPEAHRARAA 305 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++I+ +E +NL D +R R + +R F + R + G + S Sbjct: 306 AFVITASE-GANL-HLDKLR---RQSPPKV------SRPQDFDPATRDRFLAGALIPS-- 352 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIY 430 S YL+A++ R + E F Q VDVIL PTTP SA +G++ + + + Sbjct: 353 ---SWYLQAQRFRKWYRDRVREVF-QNVDVILAPTTPISAPLIGQQTMILDGEEILVRPH 408 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +FT ++ GLP +SVP +PLG+QLI P+ E + V +E Sbjct: 409 LGLFTQPLSFIGLPVLSVPIQR-PNALPLGVQLIAAPYNEALILRVAAALE 458 >gi|293392701|ref|ZP_06637020.1| AtzE family amidohydrolase [Serratia odorifera DSM 4582] gi|291424818|gb|EFE98028.1| AtzE family amidohydrolase [Serratia odorifera DSM 4582] Length = 466 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 155/492 (31%), Positives = 236/492 (47%), Gaps = 49/492 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ +++E R L+ ISA E+ ++ IE N +NAY +V A++ + AE D Sbjct: 1 MNSLSQWSIAEIRTALQQGAISAREIAQQTLEGIEAHNPALNAYTQVTAERMLSEAERLD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 + N L IP +K+ F G T A + + P +++ +L D GA++ Sbjct: 61 RARANRQPLPSLAAIPYAVKNLFDVAGETTLAGASLFSDRAPARHDAWAISRLADRGALL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P GGSSGGS+AAVA L + S+G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATRNP-----HDRSRIAGGSSGGSAAAVAAGLVSFSLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR PAS G G+KPT+GR SR G F SLD G R VRD A + A+ G Sbjct: 176 DTNGSIRVPASLCGIYGLKPTFGRLSRSGSQPFVASLDHIGPFARRVRDLAAVYDAMQGT 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D P+ E L + QG+ + Y + D+ + + + A Sbjct: 236 DVNDRFQAEKPLTLTESLLPRGQQGLRCAVLGGYFQQW----CDEDAKTAVRHVAQALEA 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 EI+LP + A A +IIS AE ++ Y LR E TR F Sbjct: 292 TEEITLPQAELARSAAFIISAAEGGNHYLPY------LR---------SEPTR---FEPN 333 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + S + Y++A++ R ++ F+Q D+++ P TP A P+G+ Sbjct: 334 SRERLLAGAMLPS-----AWYVQAQRFRADFQQQTLPLFKQW-DILIAPATPCCATPIGQ 387 Query: 419 EE---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 E N++ SMG + T ++ GLP ++VP +P+GLQLI P+RE Sbjct: 388 ETMRINDADLPIRASMG-----MLTQPISFLGLPVVTVPLKTA-GGLPIGLQLIAPPWRE 441 Query: 471 ETLFSVGQIIEK 482 + +E+ Sbjct: 442 DLALRAAHALEQ 453 >gi|167565829|ref|ZP_02358745.1| glutamyl-tRNA, putative [Burkholderia oklahomensis EO147] Length = 472 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 143/497 (28%), Positives = 229/497 (46%), Gaps = 45/497 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ F+ V++ +LR + IS VEL + + I+ + +NAYI V A A +++ Sbjct: 6 EIAFLDVAQVSAQLRLRRISPVELTHAMLARIKALDPILNAYICVTEATALEEANRAERE 65 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + +G R L G+PI +KD F KG+ T A I ++TV ++L D GAV+LGK Sbjct: 66 LADGKDRGPLHGVPIAVKDIFDMKGVPTTAGMSIRGDTIATEDATVIRRLRDAGAVILGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L M E A + P +P S + + PG SS GS AV+ LC A++ ++TG Sbjct: 126 LAMTEGAYAE-----HRAPFPTPRNSWHAA--YWPGASSSGSGVAVSAGLCYAALASETG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G IKPT+GR SR A +LD G+I R+ D+A +L+ IAG D Sbjct: 179 GSIRLPAAANGVTAIKPTWGRVSRNRTFELAATLDHVGVIARSAADAATVLQIIAGPDPA 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T P L +++G+ +G+ + + +L + I+ L+D GA+IVE Sbjct: 239 DPTTSPRAAPHVATELRSNLKGVRLGVDESWLGAHLDDATTRAMSDAIATLRDLGAQIVE 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ++LP + ++ + + + LA E +R +GQ + Sbjct: 299 VALPDVNEMIWDWFPVCAVQTA--LAH----------------EATYPSRKNEYGQSLAM 340 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 I G + + Y R + R +R+ + V+ + P P + + Sbjct: 341 LIEQGRAL-----SGTEYHRLLQRRQAFRREVLAVLD-CVNFVALPVLPAGVPTIER--- 391 Query: 422 NSGSMGHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 M I +D+ FT NMA +P++ +P +PL QLIG PF E L + Sbjct: 392 ----MSKIDDDLIADIHRFTCPFNMASVPSVLLPCGASANGLPLVFQLIGAPFDEAALVN 447 Query: 476 VGQIIEKEAGYFRPHKW 492 + + H + Sbjct: 448 AADAYQHVTTWHARHPF 464 >gi|317472533|ref|ZP_07931852.1| amidase [Anaerostipes sp. 3_2_56FAA] gi|316899942|gb|EFV21937.1| amidase [Anaerostipes sp. 3_2_56FAA] Length = 253 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 107/247 (43%), Positives = 153/247 (61%), Gaps = 7/247 (2%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L+ A+ R ++++K+I++VE V + ++ I + ++AY+ + A AEE Sbjct: 1 MGILDLTALELGR-KIKAKEITSVEAVQAVLEQIRKTEPAVHAYVSYDEESALKRAEEVQ 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K+I +G L G+P+ +KD TKG T S IL+ F P Y + + L G V++ Sbjct: 60 KQIDDGTLTGPLAGVPMAVKDNICTKGYKTTCSSRILENFVPTYAAQAVENLIAAGVVII 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NMDEFAMGS+ ETS +GP +PW + PGGSSGGS+AAVA C ++G+D Sbjct: 120 GKTNMDEFAMGSTTETSAFGPTKNPWNQ-----EHVPGGSSGGSAAAVAAGECFMALGSD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIRQPASF G G+KPTYG SR G+I++ SLDQ G + + V D A LL+ +A YD Sbjct: 175 TGGSIRQPASFCGITGMKPTYGTISRYGLIAYGSSLDQIGPMAKDVSDCAALLETVASYD 234 Query: 240 ECDATCV 246 + D+T + Sbjct: 235 KKDSTSI 241 >gi|119512906|ref|ZP_01631970.1| amidase [Nodularia spumigena CCY9414] gi|119462444|gb|EAW43417.1| amidase [Nodularia spumigena CCY9414] Length = 465 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 154/483 (31%), Positives = 234/483 (48%), Gaps = 59/483 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R+ ++SAVE+ + + I N Q+N + + A+ A A + D++I G + L G+ Sbjct: 15 VRTGEVSAVEVTQAALTRIAAQNPQLNCFTAITAETALIDAAKIDRKIAQGKNPGLLAGV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ + G+ T A S I P ++T KL GAV++G LNMDE+A G Sbjct: 75 PFAVKNLYDIAGLTTLAGSKINTENPPASQDATAVAKLKQAGAVLVGALNMDEYAYGFVT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YG +P + GGSSGGSSAAVA L ++G+DT GSIR PA+ G Sbjct: 135 ENSHYGATHNPHDL-----QRIAGGSSGGSSAAVAAGLVPLTLGSDTNGSIRVPAALCGV 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN----LP 249 +G KPTYGR SR G+ F+ SLD G R+V D A + G DE D C L Sbjct: 190 LGFKPTYGRLSRAGVALFSSSLDHVGTFARSVEDIATAFDVLQGEDERDPVCTKRSPELC 249 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VP L Q I + + + +Y SP Q+ + +A + +++P Sbjct: 250 VPQ----LYQDISQIRIAVADDYFTQSASPEALAAVQK----VAEALSVTEYVTIPEAHR 301 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A A ++I+ +E ++ L +E +R F + R + G + Sbjct: 302 ARAAAFVITASEGAN-----------LHLESL-------KSRPQDFDPATRDRFLAGALI 343 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---------GKEE 420 S S YL+A++ R E + Q VD+IL PTTP SA PL G+E Sbjct: 344 PS-----SWYLQAQRFRRWYGDRLREIW-QNVDIILAPTTPISA-PLIGQKTMILDGEEI 396 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + +G +FT ++ GLP +SVP L + +PLG+Q+I P+ E + V ++ Sbjct: 397 SVRPHLG-----LFTQPLSFIGLPVLSVPIQLPD-SLPLGVQIIAAPYNEALILRVAAVL 450 Query: 481 EKE 483 E + Sbjct: 451 ESQ 453 >gi|118591234|ref|ZP_01548633.1| amidase [Stappia aggregata IAM 12614] gi|118436310|gb|EAV42952.1| amidase [Stappia aggregata IAM 12614] Length = 469 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 149/484 (30%), Positives = 241/484 (49%), Gaps = 39/484 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ELN +++ + S DI A+E+ + ++AIE+ N ++NA+ +V+ ++A A D Sbjct: 7 ELNARTAAQTVTAVNSGDIRALEVAYASLEAIESLNPKVNAFTDVLGERALLEARAVDDA 66 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGK 121 I +G L G+P +K+ + +G+ T+A + I P ++ + +KL + GAV++G Sbjct: 67 IQDGQTLPLAGVPYAVKNLYDVEGLTTRAGAKINRENPPATADAILVRKLKEAGAVLVGA 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 +M E+A + E+++ G +P TD + GGSS GS+AA A + ++G+DT Sbjct: 127 THMGEYAYDFTGESAHDGICRNP----HDTD-YMTGGSSSGSAAATAAGMVPLAMGSDTN 181 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PASF G G+KPTYGR SR G F SLD G +TR+ D A++ + G+D Sbjct: 182 GSIRVPASFCGLFGLKPTYGRLSRAGTYPFVGSLDHLGPLTRSAEDLALIFDVLQGHDPA 241 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D N P + L + I + + + Y + P + + A +E Sbjct: 242 DPAQTNHPEIETHTRLAEDIGPLRIAVAGGYFREKALPDA----LNAVDLVAKALGASLE 297 Query: 302 ISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 I +P A A Y+I+ AE S+ +L R IL+ R F E + Sbjct: 298 IDIPEAARARAAAYVITAAEGSTLHLNR--------------ILQ-----RPRDFDPETR 338 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R + GT V + +A++ R+ + F + FE VDV+L P TP A G + Sbjct: 339 DRFLAGTMVPAIWVQ-----QAQRFRSWFRDLFRKIFEN-VDVLLAPATPFPALASGTKT 392 Query: 421 NNSG--SMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 G +M N +FT ++ GLPA++VP L K+P+G+Q+I +RE+ V Sbjct: 393 FTIGGETMPARPNIGLFTQPISFIGLPAVTVPIWLEGAKLPIGVQVIAPAWREDLALRVA 452 Query: 478 QIIE 481 +E Sbjct: 453 HQLE 456 >gi|115722904|ref|XP_782152.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115949674|ref|XP_001182719.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 529 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 143/431 (33%), Positives = 213/431 (49%), Gaps = 37/431 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD A GI H L+GF P +++TV +L D GA ++GK + Sbjct: 111 LAGKRVAIKDNVALAGIPMMNGCHALEGFTPSFDATVVTRLLDAGATIVGKSVCENLCFS 170 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T+ GPV +P +T GSS GS+ V +IG D GGSIR PA++ Sbjct: 171 GGSSTAAKGPVKNPHDPTRAT-----AGSSSGSAVVVQTGEVDMAIGGDQGGSIRLPAAW 225 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDA-TCVNL 248 TG VG+KPTYG G + SLD G +TRTV D A+ L+ IAGYD DA ++ Sbjct: 226 TGVVGLKPTYGLVPYTGAMGIEMSLDHLGPMTRTVHDCALFLEVIAGYDGGMDARQHPHM 285 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP- 305 VP Y + L+ +I G+ VGI E + ++ + K + +S LK GA + ++S+P Sbjct: 286 TVPQYTKELENLNINGLKVGILGEGFSMEGADAAVTKLLKDTLSKLKLYGAVLKDVSVPL 345 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR--- 362 HT + + + S A N+ R G G + Y +I G+ R Sbjct: 346 HTISS--SIWGASAEGAYENMCRLGGC-------GTGHVGYYPTDFAIASGKMFSSRIDD 396 Query: 363 --------IMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 I+ G Y+ + Y S Y RAR + +++ + +A E VDVI PT P +A Sbjct: 397 LSDTMKLFILQGEYL--QKNYKSQVYCRARNLVFPLRKAYDQALES-VDVIAMPTIPFTA 453 Query: 414 FPLGKEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 L +++ + N T+A N+ G PA+S+ A E +P+GL L+G+ + E Sbjct: 454 SKLIFKDDPAPEYFKKCFENTGNTMAFNLTGHPALSINAGFVE-GLPVGLMLVGKHYDEL 512 Query: 472 TLFSVGQIIEK 482 T+F V Q +EK Sbjct: 513 TIFKVAQAVEK 523 >gi|26553663|ref|NP_757597.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma penetrans HF-2] gi|26453669|dbj|BAC44001.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma penetrans HF-2] Length = 467 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 125/423 (29%), Positives = 207/423 (48%), Gaps = 27/423 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L I +KD + T S + ++ Y +TV + L GA+ + K N+DEF +G Sbjct: 59 LNKILYAVKDNINVRDTITTGGSLFFENYKSTYTATVVKLLDKAGAIPICKSNLDEFGLG 118 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S YG V++P+ D T GGSS GS+ VA L ++GTDTG SIR PASF Sbjct: 119 GTGLFSAYGDVLNPF---DETR--IAGGSSSGSAVLVAKKLVTFALGTDTGDSIRMPASF 173 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G KPTYG SR G+ ++PS+D G+ +V D AI++ I +D D T ++ + Sbjct: 174 LGVYGYKPTYGLVSRFGVFPYSPSIDHVGVFANSVDDVAIVMDTINQHDSNDFTSQDIKL 233 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE--------I 302 D+ LD+ I K+ +L L+ +D ++ + KI + + Sbjct: 234 -DFLIELDK--------IDKKAKLVTLTNVVDLLGKEEKELFTNTLNKISKEFKINEGSL 284 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 S Y I+S +EA S G+ +G + +GK E + R+ FG+E+K R Sbjct: 285 STDLIHLVPVVYEILSYSEAVSCYQNITGIPFGKKGKGKTFEEKIIDARTKNFGKELKRR 344 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 ++G++V + + + L+ +KIR LI E F++ D I+ P + A + +NN Sbjct: 345 FVLGSFV-TLKENEELLLKCKKIRRLIVDKVEELFKK-YDYIIMPGASSIAPKVSDVKNN 402 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D + N G P++++P K MP+G+ ++G+ + L ++ + I+ Sbjct: 403 KTKPSDV--DNYLQIANFGGFPSLTIPMGKI-KNMPIGINIMGKINSDNKLLALAKRIDS 459 Query: 483 EAG 485 G Sbjct: 460 LIG 462 >gi|13358109|ref|NP_078383.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761889|ref|YP_001752629.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508438|ref|ZP_02689535.2| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701575|ref|ZP_02553587.2| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11267555|pir||D82877 glutamyl-tRNA amidotransferase subunit A UU545 [imported] - Ureaplasma urealyticum gi|6899550|gb|AAF30958.1|AE002153_6 glutamyl-tRNA amidotransferase subunit A [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827466|gb|ACA32728.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675847|gb|EDT87752.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700798|gb|EDU19080.1| glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 477 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 145/492 (29%), Positives = 235/492 (47%), Gaps = 47/492 (9%) Query: 13 RDRLRSKDISAVELVDSYIQ---AIENSNSQM-NAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ +++ +L+ I I+N N+ + N Y + + Q A + S N + Sbjct: 10 HNQIKKREVKIYDLIKKSIDHDLKIKNLNATLANNYEQALKQAAFLDEKISSD---NLEI 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP +KD +TK I T S L + P Y++TV L A++L K N+DEF Sbjct: 67 DYLFGIPYSLKDNISTKNIITTGGSLFLKNYNPPYDATVKTLLDQKQAILLNKSNLDEFG 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +G + S +GPVI+P K GGSS GS+ V + +I TDTG S+R+PA Sbjct: 127 LGGTGTDSAFGPVINPLNP-----KHVSGGSSSGSAVLVQQGVVPFAIATDTGDSVRRPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G VG KP+YG SR G+ FAPSLD GI T + D+ I+ A+A D D T ++ Sbjct: 182 SIMGIVGFKPSYGLISRYGVYPFAPSLDHVGIFTNNIFDTQIVFNALAKRDFKDFTSLSF 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKDAGAKIVEISLP 305 QS+ + +Y++ L P+ D +QQ ++ L IV+++ Sbjct: 242 KT--------QSLSMLKT--KNKYKIGVLKPSFDLLASKYQQELTNL------IVKLNDE 285 Query: 306 H----TQYAL-------PAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSI 353 H Y + P Y +I+ +EA S+ + + + +G ++ + ++ TR++ Sbjct: 286 HEIINVDYDINLLKAISPVYKLIAFSEAYSSYSNFTNITFGKHDIDYDNYEDLIIKTRTL 345 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G ++K R MIG YV +++ + A+K+RTLI F + D+IL + Sbjct: 346 YLGTQLKQRFMIGAYVTQESQFETLLVAAKKMRTLIVDQAKNLF-KNCDLILNLAVHDIS 404 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + NN ++ DV +A N G P+I +P L K LGL L + L Sbjct: 405 ETID-DVNNQKPTTNLVEDVMQIA-NFGGFPSIVIP-FLTTKLGNLGLNLWADYLNDNKL 461 Query: 474 FSVGQIIEKEAG 485 + +I G Sbjct: 462 LNGAYLINNLLG 473 >gi|302420399|ref|XP_003008030.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium albo-atrum VaMs.102] gi|261353681|gb|EEY16109.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium albo-atrum VaMs.102] Length = 432 Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 108/318 (33%), Positives = 167/318 (52%), Gaps = 51/318 (16%) Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIA-------GYDECDATCVNLPVPDYERALD 258 G++ +A SLD G++ +V + L+ + +D D T ++ + Sbjct: 113 FGVVPYANSLDTVGLLASSV----VALEKLVFETGLDLEHDPNDPTSLSSEFRQSQAQQA 168 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + VG+P EY ++ L P I W + L++ G +V +SLP T++AL AYY+I+ Sbjct: 169 PEQRRLKVGLPLEYNIEELDPQIHAAWVKTAETLQELGVDVVPVSLPSTRHALSAYYVIA 228 Query: 319 PAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 PAEASSNLA+YDGVRYG R EG D +Y TR GFG EVK RI++G+Y LSS D Sbjct: 229 PAEASSNLAKYDGVRYGKRGEGSDATGQVLYSETRGNGFGDEVKRRILLGSYSLSSEAMD 288 Query: 377 SHYLRARKIRTLIKRDFTEAFE----------------------------QGVDVILTPT 408 +++++++K+R L++RDF F Q VD +L PT Sbjct: 289 NYFIQSQKVRKLVQRDFDRVFRLENPLYDEQQFDLSDMTGDVELENKLGPQQVDFLLCPT 348 Query: 409 TPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALC-------EKKMPLG 460 P+ FP E+ + Y NDVFTV ++AGLPAIS+P + + + G Sbjct: 349 APS--FPPRIEDVEKQTPVQSYTNDVFTVPASLAGLPAISIPVPIQFPSPEADDSRKVAG 406 Query: 461 LQLIGQPFREETLFSVGQ 478 LQ+IGQ + ++ + + + Sbjct: 407 LQIIGQYWDDKRVLQIAR 424 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 34/54 (62%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 + +KD ATK + T S IL +E+T+ ++L + GAV++GK NMDEF + Sbjct: 62 LAVKDNIATKDLPTTCASAILAEHASPFEATIVRQLRERGAVVVGKTNMDEFGV 115 >gi|170747334|ref|YP_001753594.1| amidase [Methylobacterium radiotolerans JCM 2831] gi|170653856|gb|ACB22911.1| Amidase [Methylobacterium radiotolerans JCM 2831] Length = 463 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 147/469 (31%), Positives = 232/469 (49%), Gaps = 36/469 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGI 74 L+++ +S V+ V++ + IE ++ A+ EV A AR AAE +D+ I +G A L G+ Sbjct: 18 LQARTLSPVDAVEALLGRIERLEPRLQAFTEVFAADARLAAEGADRAIRSGHAVGPLHGV 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD +G T S R +T+ ++L G ++LGK + EFA G Sbjct: 78 PVVLKDLIDLEGRITMGGSAAHRARRAERTATIARRLIGQGMIVLGKTHTVEFAYGGWGT 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G +PW D TPGGSS G+ +VA + IGTDTGGS+R PASF G Sbjct: 138 NQHLG---TPWNPWDPETPRTPGGSSSGTGVSVAARMAPWGIGTDTGGSVRLPASFCGLT 194 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+K T GR S GI+ + +LD G + RTV D+A+L +AI+G D D T + PD Sbjct: 195 GLKVTVGRVSTWGIVPLSMTLDTPGPLARTVEDTALLYEAISGPDPRDPTTRGV-APDAP 253 Query: 255 -RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 AL++ ++G+ +G + D ++P + + + L GA+IV+++LP A Sbjct: 254 WPALNRGVRGLRLGRMPDPERDGVAPDMLAAYDAALDLLAGQGAEIVDVALPFRFSDCVA 313 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 I+ AEA V G + E+ S G V+ RI+ G V + Sbjct: 314 MSQITNAEAYF-------------VNGT----LAEDP-SAELGDAVRARILAGANVSA-- 353 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 YL R +K+ + A G+D +LTPTT ++A L + H+ + Sbjct: 354 ---QEYLGTLHRRAAMKQQYDAAL-AGIDALLTPTTESAAVALDAVDE-----AHLPSR- 403 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT N+ L A+++P +PL LQ++ + + E T +GQ ++ Sbjct: 404 FTRFGNLLDLCALALPNGFTASGLPLSLQIVCRGYEETTALRIGQAYQR 452 >gi|284988921|ref|YP_003407475.1| amidase [Geodermatophilus obscurus DSM 43160] gi|284062166|gb|ADB73104.1| Amidase [Geodermatophilus obscurus DSM 43160] Length = 511 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 135/436 (30%), Positives = 213/436 (48%), Gaps = 32/436 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD G+ SH ++GF P ++TV +L + GA + GK ++ Sbjct: 88 LAGRTVAVKDNVEVAGVPMMNGSHTVEGFVPREDATVVTRLLEAGATITGKSVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +PW +T GGSS GS+A VA ++G D GGSIR PA+F Sbjct: 148 GGSHTSVTGPVRNPWDPSRTT-----GGSSSGSAALVASGEVDLAVGGDQGGSIRMPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPT+G G +LD G +TRTV D+A +L +AG D D V Sbjct: 203 SGIVGHKPTHGLVPYTGAFPIELTLDHLGPMTRTVADAAAMLDVLAGRDGDDPRQPADVV 262 Query: 251 PD-YERALDQSIQGMTVGIPKE-YRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHT 307 P+ Y ALD + G+ VG+ + + + LS +D T + L++ G ++V++ LP Sbjct: 263 PEQYAAALDGDVAGLRVGVVAQGFGWEELSEDGVDDTVRAAAERLRELGIEVVDVDLPWH 322 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGK---DILEMYENTRSIGFGQEVKHR-- 362 ++AL + +I+ A+ + +G YG EG+ +++ Y R +EV R Sbjct: 323 RHALHVWNVIATDGATVQMVEGNG--YGWNYEGRYDPELIAHYGRQR-----REVVDRWS 375 Query: 363 ------IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--F 414 + G + L R HY A+ + T ++R + A VD+++ PT P A Sbjct: 376 PTVTAVALTGRWSL-EREQTRHYAMAQNLATEVRRQYDAALAD-VDLLVMPTVPMVAPEI 433 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P + + + V +++G PA SVPA L + +P+G+ L+G+ F + T Sbjct: 434 PAPDDPVETRVARALEMIVNCAPFDVSGHPATSVPAGLS-QGLPVGMMLVGRRFEDTTPL 492 Query: 475 SVGQIIEKEAGYF-RP 489 V E+ G F RP Sbjct: 493 KVAHAFEQLVGGFPRP 508 >gi|114762387|ref|ZP_01441845.1| putative amidase [Pelagibaca bermudensis HTCC2601] gi|114545005|gb|EAU48009.1| putative amidase [Roseovarius sp. HTCC2601] Length = 464 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 144/485 (29%), Positives = 246/485 (50%), Gaps = 43/485 (8%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 +F+ ++E+ +R+ + +++ +L + I N ++A++ V +A AAA +D I Sbjct: 4 SFLTIAEASERIAAGTLTSEQLTRDCLDRIAALNETLHAFVLVREDEAMAAARAADAEIA 63 Query: 65 NGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L GIP+GIKD T G+ T S + P + + ++L GA+++GK Sbjct: 64 AGRRIGPLHGIPMGIKDIVETAGVRTTGQSALFLDRVPERSAHLWERLEAAGAILIGKTT 123 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA+G + + P +PW T SS GS+AAVA LC+ +IGTDTGGS Sbjct: 124 TWEFAIGGTAHDLPFPPARNPWDPSRETGG-----SSSGSAAAVAAGLCSGAIGTDTGGS 178 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA++ G G+KPTYG R G+ + +LD G + + D A++++ +AG D DA Sbjct: 179 VRVPAAWCGIAGLKPTYGLVGRSGVYPLSHTLDHPGPMCWSSEDCALMMEVLAGDDPRDA 238 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + P + R + + + G+ +G+ + D++ P + +GI L++AGA++ Sbjct: 239 STRAAPALPFTRRVTEGVAGLRIGV-WDAMTDHIQTDPEVADAMSRGIDALREAGAEVRS 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNL-ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++LP P I +A NL +R + Y RV ++ E Y G E + Sbjct: 298 VTLP------PLKEI----DAVCNLISRSESFAYH-RVNLEEQPEKY--------GFESR 338 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G+ + + + Y+ A+++RTLI F +AFE D+I+ T + A P G Sbjct: 339 ARLLAGSIIGA-----AEYIEAQRVRTLIISAFEDAFED-FDLIVCEMTGSVAPPHGDAT 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 Y + + A N+ GLPA SV + +P+ +Q+IG F + L + G ++ Sbjct: 393 T--------YTRLGSRAGNVTGLPAHSVCTGFDAQGLPMAMQIIGPAFADAVLLAAGHVV 444 Query: 481 EKEAG 485 E+ G Sbjct: 445 EQACG 449 >gi|319650579|ref|ZP_08004719.1| hypothetical protein HMPREF1013_01324 [Bacillus sp. 2_A_57_CT2] gi|317397760|gb|EFV78458.1| hypothetical protein HMPREF1013_01324 [Bacillus sp. 2_A_57_CT2] Length = 518 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 155/486 (31%), Positives = 243/486 (50%), Gaps = 40/486 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + E + ++ +++++ ELV Y+ I + +N+ I V + A++ DK Sbjct: 44 EIEEATIFELQHEMQKEELTSEELVQFYLNRIGEYDDSINSII-TVNENVLEEAKQLDKE 102 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ R L GIP+ +KD + T + T A S L+G P ++ T++L D GA++LGK Sbjct: 103 RKAGNVRGPLHGIPVILKDNYDTYDMQTTAGSLSLEGSIPLKDAYQTKRLRDQGAIILGK 162 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA G +S G +P+ D T PGGSSGG++AAVA A +GTDTG Sbjct: 163 ANLHEFAFGFQTISSLGGQTYNPY---DLTR--YPGGSSGGTAAAVASNFAAVGLGTDTG 217 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+SF VG++PT G SR GII A S D G + RTV D A++L AIAGYD Sbjct: 218 GSIRIPSSFNNLVGLRPTMGLASRDGIIPLALSQDVGGPMGRTVEDVAVVLDAIAGYDPA 277 Query: 242 D----ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D A+ +P ++ +G+ ++ + P ++K Q I+ ++ GA Sbjct: 278 DPVTEASIGKVPKTYTHYLKKNGLKKARIGVIRDLFGN--DPEVNKVMDQVIADMEALGA 335 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-----KDILEMYENTRS 352 ++ E+++P L +Y +S E L Y GL + DI+E + S Sbjct: 336 EVFEVTIPSLSPIL-SYPSLSGYEFKFQLNDY---LAGLGPDAPVRTLSDIIESGKFHPS 391 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + G +K R + +D R + R + F E +D +L PT +S Sbjct: 392 LESG--LKSRNERESLENDEEYHDIITNRPKMARESLMVTFN---EHDLDALLYPT--SS 444 Query: 413 AFP--LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 A P +GK + +G+ + +G PAISVPA + +P+GL+L+G+ F E Sbjct: 445 ALPAQVGKSQ-GAGNANRL--------SPYSGFPAISVPAGFSDNGLPVGLELLGKEFDE 495 Query: 471 ETLFSV 476 TL + Sbjct: 496 PTLIKL 501 >gi|110634641|ref|YP_674849.1| amidase [Mesorhizobium sp. BNC1] gi|110285625|gb|ABG63684.1| Amidase [Chelativorans sp. BNC1] Length = 456 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 143/477 (29%), Positives = 228/477 (47%), Gaps = 48/477 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R++ IS +ELV++ + I+ + + +Y EV + AR +A ++ I G+ R L GI Sbjct: 13 IRTRAISPIELVETIVARIKGIDPVLKSYAEVFEEHARRSAVNAEAEISRGNYRGPLHGI 72 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD K T+ I F P +TV +L GA+++GKLNM E A+ Sbjct: 73 PVALKDLIFAKYGPTKCGMTIYRDFVPTSNATVVTRLEAAGAIIVGKLNMTEGAL----- 127 Query: 135 TSYYGPVI----SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + P++ +PW + G SS G+ +A A LC ASIG+D+GGSIR PA+ Sbjct: 128 -SGHHPLLDTPSNPWGA-----NLWTGASSSGAGSATAAGLCFASIGSDSGGSIRLPAAA 181 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G SR G+ A +LD G I R+ D A++L AIAG D D T + P Sbjct: 182 NGLTGLKPTWGLISRNGVFPLAETLDHIGPIARSAEDIAVVLSAIAGEDTEDPTSLRQPA 241 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 DY Q I+G+ +G+ + + D + P + Q +S GA + + P T Sbjct: 242 QDYLSLARQPIRGLRIGVDEAFAFDGVDPQVSGALQDALSVFARLGAHLRVMKFPSTADV 301 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + + I +E + V D +N +G ++ RI G + Sbjct: 302 VRHWRTICFSECA--------------VAHSDTYPARKNE----YGHDLADRIEYGRSLS 343 Query: 371 SSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 ++ + HYL KIR +++ E DV +TP + + + ++S M Sbjct: 344 ATDLAKALHYL--AKIRGPVQKAMDEC-----DVFITPAMSSPVPEVSVDSSSSDRMR-- 394 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 Y +F N+ G PA+S ++ P+GLQL+G+ E L V + E G+ Sbjct: 395 YMAIF----NLTGHPALSFNGGFDIRQAPIGLQLVGEHLGEAVLLRVVHAFQTETGW 447 >gi|4586312|dbj|BAA76345.1| indole acetamide hydrolase [Agrobacterium tumefaciens] Length = 467 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 146/492 (29%), Positives = 237/492 (48%), Gaps = 51/492 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV++ I + + +NA + R +A+++D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVETLIARCQAAK-PLNALLATDWDGLRRSAKKNDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S V ++L+ GA+ NM E Sbjct: 62 AGLGLCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPWNP-----SLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT GR R II F+P+ D AGII + V D IL + I+G + Sbjct: 177 PAALCGVVGFRPTLGRYPRDRIIPFSPTRDTAGIIAQCVADVIILDQVISGRSAKIS--- 233 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 234 --PMP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE--NTRSIGFGQEV 359 + +LP P L + G V D+++ + +I Q Sbjct: 283 LEELNSGASLPIALYEFPHALKKYLDDFVGT-----VSFSDVIKGIRSPDVANIVSAQID 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H+I Y L+ + + R R T R++ ++ +D IL PT P +A +G+E Sbjct: 338 GHQISNDEYELARQSF-----RPRLQATY--RNYFRLYQ--LDAILFPTAPLAAKAIGQE 388 Query: 420 EN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++GSM + + ++ V+ AGLP +S+PA L ++P+G+++ G + L Sbjct: 389 SSVIHNGSMMNTFK-IYVRNVDPSSNAGLPGLSLPACLTPDRLPVGMEIDGLAGSDHRLL 447 Query: 475 SVGQIIEKEAGY 486 ++G +EK + Sbjct: 448 AIGAALEKAINF 459 >gi|115685496|ref|XP_001178679.1| PREDICTED: similar to Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, partial [Strongylocentrotus purpuratus] gi|115725772|ref|XP_001188607.1| PREDICTED: similar to Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, partial [Strongylocentrotus purpuratus] Length = 293 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 28/291 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E RLR +SA EL I+ ++NA++ + A++ ++I G Sbjct: 4 LSIREVALRLRDGRLSATELCSRCIERARRCK-ELNAFVTERFDEVLGDAKKIHEKISKG 62 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIPI +KD ++T G+ T S +L ++P + +TV Q+L D GA+ +GK N+D Sbjct: 63 TTIGTLGGIPIAVKDNYSTAGLRTTCGSKMLWNYKPPFTATVVQRLEDEGAITMGKTNLD 122 Query: 126 EFAMGSSNETSYYGPVISPWR--------------------------SMDSTDKFTPGGS 159 EFAMGS S +GP + WR S+ +D F GGS Sbjct: 123 EFAMGSGTTESLFGPTRNIWRYPFHRVQKRLSQTAGGKYSSEGDVHESVADSDWFVSGGS 182 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS AVA C A++G+DTGGS+R PASF G VG+KPTYG CSR G+IS SLD G Sbjct: 183 SGGSGVAVASGSCMAALGSDTGGSVRLPASFCGVVGLKPTYGLCSRHGLISLVNSLDVPG 242 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 I T+TV D+A +L A+AG+D D+T V P + + ++G+ +GIP+ Sbjct: 243 IFTKTVDDTATVLGAMAGHDPMDSTTVTDPFTPFTLPDEIDVKGLHIGIPQ 293 >gi|323452656|gb|EGB08529.1| hypothetical protein AURANDRAFT_11143 [Aureococcus anophagefferens] Length = 432 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 140/460 (30%), Positives = 216/460 (46%), Gaps = 54/460 (11%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGF 99 N ++ V +ARAAA + +R+ G +D L G+P K G A S + G+ Sbjct: 1 NDFVRV--DEARAAA--TSRRLDAGARKDAPLFGVPFAAKANLCVAGETPTAGSAAVGGW 56 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 ++T +L D GAV++G N DEF MGS+ E S +G ++P R ++ + GS Sbjct: 57 VARADATAVARLADAGAVLVGSTNCDEFGMGSTGEASAHGATLNP-RDAAASPGGSSSGS 115 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 + +A F ++G+DTGGS+R PAS+ G VG+KP+YGR SR G++++ S D G Sbjct: 116 AAAVAAGSVPF----ALGSDTGGSVRLPASWCGVVGLKPSYGRVSRHGLLAYCSSTDCVG 171 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 +V D+A +L+ IAG D DATCV+ PV DY L P +R+ ++ Sbjct: 172 AT--SVGDAAAVLRVIAGADGLDATCVDAPVEDYAGLL---------AAPSNFRVAAVAE 220 Query: 280 TIDKTWQQGISWLKDAGAKIVE--ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 D + A A + +SLP + A AYY++S +EA NL+RY Sbjct: 221 ASDLADADAAAAAAAAAAALGADVVSLPWLRDACAAYYVLSASEAFGNLSRY------AH 274 Query: 338 VEGKDILEMYE--NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 V+ E + + S FG EV R+ +G + L R D Y RA +R ++RD Sbjct: 275 VDRPRTAEAWRRVDHASAPFGAEVLRRLRLGAHFLGDRHADGLYGRAEAVRDAVRRDLAS 334 Query: 396 AFEQGVDVIL-------------------TPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 F ++L P P + E + H D T Sbjct: 335 VFRDYDALVLPVAPTAAPAAGAARGAPSRAPRPPAGSLLAAVEGDLPDGWAH---DQLTC 391 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++AG PA+S+P +P+G+Q++ +P + T V Sbjct: 392 FASLAGAPALSLPFGASRAGLPVGVQVVARPLGDATALRV 431 >gi|171920353|ref|ZP_02690692.2| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902780|gb|EDT49069.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 477 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 144/492 (29%), Positives = 234/492 (47%), Gaps = 47/492 (9%) Query: 13 RDRLRSKDISAVELVDSYIQ---AIENSNSQM-NAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ +++ +L+ I I+N N+ + N Y + + Q A + S N + Sbjct: 10 HNQIKKREVKIYDLIKKSIDHDLKIKNLNATLANNYEQALKQAAFLDEKISSD---NLEI 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP +KD +TK I T S L + P Y++TV L A++L K N+DEF Sbjct: 67 DYLFGIPYSLKDNISTKNIITTGGSLFLKNYNPPYDATVKTLLDQKQAILLNKSNLDEFG 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +G + S +GPVI+P K GGSS GS+ V + +I TDTG S+R+PA Sbjct: 127 LGGTGTDSAFGPVINPLNP-----KHVSGGSSSGSAVLVQQGVVPFAIATDTGDSVRRPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G VG KP+YG SR G+ FAPSLD GI T + D+ I+ A+A D D T ++ Sbjct: 182 SIMGIVGFKPSYGLISRYGVYPFAPSLDHVGIFTNNIFDTQIVFNALAKRDFKDFTSLSF 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKDAGAKIVEISLP 305 QS+ + +Y++ L P+ D +QQ ++ L IV+++ Sbjct: 242 KT--------QSLSMLKT--KNKYKIGVLKPSFDLLASKYQQELTNL------IVKLNDE 285 Query: 306 H----TQYAL-------PAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSI 353 H Y + P Y +I+ +EA S+ + + + +G ++ + ++ TR++ Sbjct: 286 HEIINVDYDINLLKAISPVYKLIAFSEAYSSYSNFTNITFGKHDIDYDNYEDLIIKTRTL 345 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G ++K R MIG Y +++ + A+K+RTLI F + D+IL + Sbjct: 346 YLGTQLKQRFMIGAYATQESQFETLLVAAKKMRTLIVDQAKNLF-KNCDLILNLAVHDIS 404 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + NN ++ DV +A N G P+I +P L K LGL L + L Sbjct: 405 ETID-DVNNQKPTTNLVEDVMQIA-NFGGFPSIVIP-FLTTKLGNLGLNLWADYLNDNKL 461 Query: 474 FSVGQIIEKEAG 485 + +I G Sbjct: 462 LNGAYLINNLLG 473 >gi|13488186|ref|NP_085606.1| Glu-tRNA(Gln) amidotransferase subunit A [Mesorhizobium loti MAFF303099] gi|14027855|dbj|BAB54447.1| Glu-tRNA(Gln) amidotransferase subunit A [Mesorhizobium loti MAFF303099] Length = 466 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 145/486 (29%), Positives = 229/486 (47%), Gaps = 34/486 (6%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++ + +R +++S+VE V ++ I + +++A+ +V A A A +D+ N Sbjct: 6 FWSIEQLSERFARRELSSVEAVTELVRRIAALDGRLHAFCQVDEDGALARARAADEARAN 65 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G++ L G+P+ +KD F G T A S+ L+ P + +KL G + +G+ NM Sbjct: 66 GNSTSPLLGVPLAVKDIFDQAGHGTHAGSNALNDRLPIRSANAVEKLESAGMIAIGRTNM 125 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA G G +PW +D+ GGSS GS+ AVAG A++GTDTGGSI Sbjct: 126 VEFAYGGWGTNQVQGAPCNPW-GLDT--HVVAGGSSSGSAVAVAGGFAPAALGTDTGGSI 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA++ G VG+K + G R G++ P+ D G +TRTVRD+A+LL+A+ G D D Sbjct: 183 RTPAAWCGIVGLKTSVGLVGRGGVVPLCPTHDSVGPMTRTVRDAALLLEAMVGSDPRDVA 242 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++P ++ ++G+ +G+ E L + P I + I+ L GA+ +I+L Sbjct: 243 TWHVPSVRSLTTIEDGVKGLRIGMLHERDLAGVEPDIRMLHDRAIADLTALGAQFHKIAL 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + S L R + + VE L Y + RI Sbjct: 303 PLS--------------ISDYLGRGGDI---MSVESYAFLSAYVEHPDSPVDPVIAERIS 345 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G + Y R + R L + F EA G D + P + S PLG E + S Sbjct: 346 RGRDI-----SGPAYYRLLETRRLAQIGFQEA-AAGFDAFVAPGSHRSPVPLG-EVDESQ 398 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE- 483 H F VN L ++ VP L +P GLQ++ + F + +G+ +E+E Sbjct: 399 PPNH-----FGRLVNYLDLASLVVPVGLTSNGLPAGLQIVVRKFDDALALRIGRTLERER 453 Query: 484 AGYFRP 489 G F P Sbjct: 454 GGLFVP 459 >gi|219849410|ref|YP_002463843.1| amidase [Chloroflexus aggregans DSM 9485] gi|219543669|gb|ACL25407.1| Amidase [Chloroflexus aggregans DSM 9485] Length = 473 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 144/489 (29%), Positives = 229/489 (46%), Gaps = 64/489 (13%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 +LR + IS VELV+ ++ I ++ +N + V+A+ A A A ++ + G R L G Sbjct: 33 QLRRRTISPVELVEQALERIATHDADLNVFQIVMAESALADARAAETELAAGKIRGPLHG 92 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ +KD F G T A S I ++TV ++L GA+++GK M EFA + Sbjct: 93 VPVAVKDLFDVAGYPTAAGSRIRADVMATIDATVVERLRAAGAIVIGKTRMSEFAYSPGS 152 Query: 134 ETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++YGP +P+ R DS + GS A A + A++GTDTGGSIR PA+ G Sbjct: 153 NNAHYGPTANPYDRQRDSGGSSS------GSGVATATGMVFAALGTDTGGSIRIPAAHCG 206 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPT+GR S G + + SLD AG +TR+V D+A++L +AG D D + P PD Sbjct: 207 IVGLKPTHGRVSLAGGFTLSWSLDHAGPMTRSVADAALMLSVLAGPDPRDPRTLR-PAPD 265 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW------------LKDAGAKIV 300 + G+ G+ + R+ L T D + Q L GA ++ Sbjct: 266 FTGG------GLVAGV-RNLRVGLL--TADGSGQPMAEAAELAAMQRVADVLAGQGAIVI 316 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + LP L A +++ + L +E + + TR +G+ ++ Sbjct: 317 PLELPE----LEALRLLN--------------QALLAMEAAALHLPWLRTRLDDYGEFMR 358 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 HRI+ ++ S R ++ R + +R + VD+++TPT P LG Sbjct: 359 HRIL-AAFIYSP----VDVTRVQQARAIFRRRVATRLAE-VDLLITPTVPGPVPALGVPT 412 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S FT N G PA+S+PA L +P +QL+ +P+ E L Sbjct: 413 PTS----------FTGPWNFLGWPALSLPAMLGADGLPRAVQLVARPWNEPLLLRAAFAA 462 Query: 481 EKEAGYFRP 489 E+ G + P Sbjct: 463 EQALGRWVP 471 >gi|122919913|pdb|2DC0|A Chain A, Crystal Structure Of Amidase gi|122919914|pdb|2DC0|B Chain B, Crystal Structure Of Amidase Length = 434 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 142/475 (29%), Positives = 228/475 (48%), Gaps = 60/475 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 R+ ++ +E +A ++ N+ E ++A A EE + + G L G+P+ Sbjct: 14 RTTPLALLEEALERAKAFQDRNALAYLDEEAARKEALALTEELRRGQVRGP---LHGLPL 70 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F KG+ T+A + P E+ ++L + GA++ K N E A+G + E Sbjct: 71 TVKDLFPVKGMPTRAGTKAPLPPLPE-EARAVRRLREAGALLFAKTNXHEIALGITGENP 129 Query: 137 YYGPV---ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + GPV + P R GGSSGGS+ AVA + AS+GTDTGGSIR PA F G Sbjct: 130 WTGPVRNAVDPSRQA--------GGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGFNGV 181 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP+YGR S G + + S D AG +TR+VRD+ L + +AG ++P+ Sbjct: 182 VGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGE--------SIPL--- 230 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + +Q G+P ++ L + K + + + L A++ E+SLP L Sbjct: 231 -----EGVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-----LEG 280 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y E + L RY+ R+ K + E E GF +V+ ++ G + Sbjct: 281 VY-----EVYTRLVRYEAA----RIHEKALKEHPE-----GFSPQVREALLAGLAL---- 322 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN--NSGSMGHIYN 431 + Y A R ++ + +A +GVD +L P P A PLG EE SG GH Sbjct: 323 -TEKDYRDAVAEREALRLELVKAL-RGVDALLLPVQPLPAPPLGTEEVELESGRKGHREA 380 Query: 432 DV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + T+ ++ G+P +++P A E P+GLQ++G + + ++G +E G Sbjct: 381 FITLTLPFSLLGVPTLALPFAKVE-GXPVGLQVVGAYGEDGKVLALGGWLEARLG 434 >gi|41615151|ref|NP_963649.1| hypothetical protein NEQ360 [Nanoarchaeum equitans Kin4-M] gi|40068875|gb|AAR39210.1| NEQ360 [Nanoarchaeum equitans Kin4-M] Length = 432 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 144/443 (32%), Positives = 222/443 (50%), Gaps = 30/443 (6%) Query: 45 IEVVAQKARAAAEESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY 103 +E + + A+ E+++ I N + + + IKD TK + T A S +L+ + P Y Sbjct: 5 VEQIMEYAKKVDEKTNSIITFNNELIENPSFIVTIKDNIVTKNLRTTAGSKMLEDYIPPY 64 Query: 104 ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR-SMDSTDKFTPGGSSGG 162 +S V+++L A+++GK MDEF GS S I R ++D S G Sbjct: 65 DSFVSEQLKKANALIIGKTAMDEFGFGSFGVNS----CIKVARNALDPNRVAGGSSSGAG 120 Query: 163 SSAAVAG--FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 + A+ + +I TGGSI PA+F +GI PTYG SR G+I +A SLD+ G+ Sbjct: 121 AFTALFNKKYDNHVAIAVSTGGSISNPAAFNSVIGITPTYGLVSRYGLIDYANSLDKIGV 180 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 + + +L+ IA D D T V L P + +D+ T+G+ R+D + Sbjct: 181 MGTNIDYMKKVLEIIAKPDPRDQTNVGLKEPI--KYIDKK---FTIGV---IRVD-VDEK 231 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-- 338 I+K + +S L+ EI P AL +YYII+ AEAS+NLARY + +G V Sbjct: 232 IEKAFYNFVSELEKEYKI-EEIEFPLFDIALASYYIIAMAEASTNLARYGNILFGYSVNP 290 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 +GK E Y +R + F +E K RI++GT V + +Y +A R + ++ F+ Sbjct: 291 KGKHYDEFYMESREL-FCEETKRRILVGTLVRTKGFKGKYYEKALIGRKKVIEEYKRLFK 349 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKM 457 + D++LTPT P P +E S +IY D+ TV N+AGLP +S P Sbjct: 350 K-FDLLLTPTMPI--LPPKFKELESLKPINIYRMDILTVPPNLAGLPHMSYPIDKF---- 402 Query: 458 PLGLQLIGQPFREETLFSVGQII 480 +G Q I F E LFS+ +I+ Sbjct: 403 -IGAQFIANHFNESYLFSIAKIL 424 >gi|190572011|ref|YP_001967690.1| 2-amino-5-chloromuconate deaminase [Comamonas testosteroni CNB-1] gi|152012433|gb|ABB13583.2| 2-amino-5-chloromuconate deaminase [Comamonas testosteroni CNB-1] gi|255293112|dbj|BAH90205.1| amidase [uncultured bacterium] Length = 462 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 146/487 (29%), Positives = 222/487 (45%), Gaps = 50/487 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++++E RLR ++++AV L+D+ Q ++NAY +AR+AA D + G Sbjct: 6 LSLAEHAARLRRRELTAVALIDTCAQHHARMEPRLNAYKTWDGARARSAAAAVDTLLDQG 65 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP---HYESTVTQKLWDNGAVMLGKL 122 D L G+P+ +KD + G+ A S D P + +L +++GK Sbjct: 66 QDLGPLMGLPVSVKDLYGVPGLPVFAGS---DEALPEAWQAAGPLVARLQRQLGIVVGKT 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EFA G +++G +PW + PGGSS G+ ++ ++GTDT G Sbjct: 123 HTVEFAFGGLGVNAHWGTPRNPW---SPHEHRVPGGSSAGAGVSLVQGSALLALGTDTAG 179 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PAS TG VG+K T GR GI+ + SLD AG++TRTV D A A+ D Sbjct: 180 SVRVPASMTGQVGLKTTVGRWPVEGIVPLSSSLDTAGVLTRTVEDLAYAFAAL------D 233 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LP P R +QG+ VG+P + D + P+I + + L AGA++V Sbjct: 234 TESQGLPAPAPVR-----VQGLRVGVPTNHFWDDIDPSIAAAVEAAVQRLAQAGAQVVRF 288 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LPH + A + A+S LA Y + +VE D + V+ R Sbjct: 289 PLPHCEEAFDIFR--RGGLAASELAAYLDQHFPHKVERLDPV--------------VRDR 332 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---- 418 + V S YLR + + F+ VDV+LTPT P S L Sbjct: 333 VRWAEQVSS-----VEYLRRKAVLQRCGAGAARLFDD-VDVLLTPTVPASPPRLADIGTV 386 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E +M + N + N+ G A+++P L +MP+GLQL+G P E L + Sbjct: 387 ETYAPANMKAMRNTAIS---NLFGWCALTMPVGLDANRMPVGLQLMGPPRAEARLIGIAL 443 Query: 479 IIEKEAG 485 IE G Sbjct: 444 GIEALIG 450 >gi|33594214|ref|NP_881858.1| putative amidase [Bordetella pertussis Tohama I] gi|33564289|emb|CAE43586.1| putative amidase [Bordetella pertussis Tohama I] gi|332383628|gb|AEE68475.1| putative amidase [Bordetella pertussis CS] Length = 442 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 135/420 (32%), Positives = 205/420 (48%), Gaps = 48/420 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSH-ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD G+ T S + ++ V +L GA+++GK N EFA Sbjct: 65 LHGIPVAVKDLIDVAGMRTTMGSQQYANQASAERDAQVVARLRAEGAIIVGKTNTHEFAY 124 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + + SY+G +P T SS GS+AA+ LCAA++GTDT SIR PA+ Sbjct: 125 GPTGDRSYFGAACNPRDPARMTGG-----SSSGSAAALGAGLCAAALGTDTSASIRLPAA 179 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+KPTY R G + +LD G ++ TVRD+A+LL A+AG P Sbjct: 180 LCGVVGLKPTYDLLPRAGAFDLSQTLDHVGPMSATVRDNAVLLDALAGQ----------P 229 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y R QS++G TVG+ + LDYL + + +Q + AGA++V I + Q Sbjct: 230 AHSYARLAGQSVRGRTVGLATGFYLDYLDAPVRQALEQAQEAFRQAGAQVVPIEIAQVQA 289 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A ++ EA + + T + + EV+ R++ G V Sbjct: 290 IYEAQQLVLKTEAYAR-------------------HLRALTTNAPYQDEVRARLLTGADV 330 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L+ YL+A +RT+ +R F EA Q VDV+L PT +A PL +++ + G Sbjct: 331 LA-----VDYLQAMAMRTVARRAFDEALAQ-VDVLLCPTCGLTA-PL-RDQRTTALDGQE 382 Query: 430 YNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 Y+ T N++G P++SVP + +P+ +QLIG+ E L+ GQ +E A Sbjct: 383 YSTTWLLTRLTAPTNLSGHPSLSVPFGADSQGLPISMQLIGRHLDEAVLYQFGQALEDAA 442 >gi|254413517|ref|ZP_05027287.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] gi|196179624|gb|EDX74618.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] Length = 457 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 136/468 (29%), Positives = 212/468 (45%), Gaps = 41/468 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +I+A + + I+ N +N + V A A A AE D+ I G+ L G+P + Sbjct: 21 EITASAIARDCLAQIDTRNPSLNCFTAVTADTAIAKAERVDQAISRGEFPGVLAGVPFAV 80 Query: 79 KDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 K+ F G+ T A S I P ++++T +L GAV++G LNMDE+A G S+ Sbjct: 81 KNLFDVAGLTTLAGSKINAENPPANHDATAVTRLKQAGAVLVGALNMDEYAYGFVTVNSH 140 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG +P D T +S A L ++G+DT GSIR PA+ G G+K Sbjct: 141 YGATPNPH---DPTRVSGGSSGGSAASVATG--LVPLTLGSDTNGSIRVPAALCGIFGLK 195 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYGR SR G I F+ SLD G R++RD A + G DE D C P L Sbjct: 196 PTYGRLSRAGAILFSSSLDHIGPFARSIRDIATAFDILQGSDERDPVCTQRPPEPCLPQL 255 Query: 258 DQSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 ++ I+G+ + + EY +P +D ++ + A + +P A A Y+ Sbjct: 256 EKGIEGLRIAVAGEYFTQGATPEALD-----AVAKVAQALNVTATVRIPEAHRARAAAYM 310 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 I+ EG ++ +R F + R + G + + Sbjct: 311 IT------------------ATEGANLHFANLRSRPQDFDPATRDRFLAGALIPA----- 347 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND---V 433 S Y++A++ R ++ E F Q VD+IL PTTP A + ++ G + + Sbjct: 348 SWYIQAQRFRQWYRQRVQELF-QTVDIILAPTTPCVAPRIDQDTMVIGGEEILVRPNLGL 406 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 FT ++ GLP +SVP +PLG+Q+I P E + V ++E Sbjct: 407 FTQPLSFIGLPVLSVPVK-SSNSLPLGVQIIAAPDHEAMILRVAAVLE 453 >gi|116625172|ref|YP_827328.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116228334|gb|ABJ87043.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 468 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 147/482 (30%), Positives = 225/482 (46%), Gaps = 59/482 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +RS +SAVE V + I+ + +N + V+ + A + A E D+R+ G D L G+ Sbjct: 18 IRSGGLSAVEAVTMTLGKIDRYDRSVNCFTTVLRESALSDAAEIDRRLAAGEDPGPLCGV 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ F G+ T A S I P +++TV ++L GA+ +G LNMDE+A G + Sbjct: 78 PFAVKNLFDIAGLTTLAGSKIHAECAPAAHDATVVERLKSAGAIAVGALNMDEYAYGFTT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YGP +P SSGGS+AAVA L ++G+DT GSIR PA+F G Sbjct: 138 ENSHYGPTRNPHDLERVAGG-----SSGGSAAAVAAGLVPLTLGSDTNGSIRVPAAFCGV 192 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPTYGR SR G F S D G R+V D A+ + G D D C Sbjct: 193 FGLKPTYGRISRAGAFLFCESFDHVGPFARSVGDLALAFDTLHGPDARDPVCSARQAEPV 252 Query: 254 ERALDQSIQGMTVGIPKEY-----RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 L++ I G+ + + Y + +P G+ + VE+ P + Sbjct: 253 LPQLERGIDGLRIAVAGGYFARRGMPEAFAPVTTAARALGVM-------RTVEV--PDSD 303 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A A Y+I+ E S R+ +D+ TR F V R + G Sbjct: 304 VARAAAYVITACEGS-------------RMHFQDL-----KTRPQDFDPLVVDRFLAGAL 345 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--------EE 420 + + + Y +A++ RT+ + E F Q VD++L P TP A +G+ E Sbjct: 346 LPA-----TWYQQAQRFRTVFRAKVRELF-QNVDILLAPATPCPAIRIGQATITLDGVEL 399 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + S+G +FT ++ GLP + P +P GLQ++G P+ E + V + + Sbjct: 400 PSRPSVG-----LFTQPLSSIGLPIVVAP-VFGPGMLPAGLQIVGAPYNESAVLRVARYL 453 Query: 481 EK 482 EK Sbjct: 454 EK 455 >gi|302186602|ref|ZP_07263275.1| amidase [Pseudomonas syringae pv. syringae 642] Length = 556 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 133/431 (30%), Positives = 211/431 (48%), Gaps = 27/431 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 193 GASFTSATGAVKNPW---DLTRNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD AI+L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAIMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+D GA + + S P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLEDLGATVGDASAPWHR 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G DI+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFGAKRREHANALSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P A PL Sbjct: 426 AALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKH-FDVLVMPTMPFVATPLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA SVPA L E +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSVPAGLAE-GLPVAMMIVAPRFKDALALRV 539 Query: 477 GQIIEKEAGYF 487 Q E G F Sbjct: 540 AQAYESTRGAF 550 >gi|300864621|ref|ZP_07109479.1| amidase [Oscillatoria sp. PCC 6506] gi|300337370|emb|CBN54627.1| amidase [Oscillatoria sp. PCC 6506] Length = 463 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 147/476 (30%), Positives = 230/476 (48%), Gaps = 41/476 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGDARDLE 72 + +++ I+A +V + ++ I + +N + V A A A A++ DK I ++ + L Sbjct: 16 EAIKTGKITAKAVVTAALERITAKDKTLNCFTTVTADTALADADKIDKAIALHQNPGPLA 75 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P +K+ F G+ T A + I P ++T+ +L GA+++G NMDE+A G Sbjct: 76 GVPFAVKNLFDIAGVTTLAGAKINQETPPATSDATLVTRLKQAGAILVGAQNMDEYAYGF 135 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 E S+YGP +P D+T GSSGGS+AAVAG L S+G+DT GSIR P++ Sbjct: 136 VTENSHYGPTRNPH---DTTRVAG--GSSGGSAAAVAGGLVPLSLGSDTNGSIRVPSALC 190 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G+KPTYGR SR G F SLD G R+VRD A + + G D D C N P Sbjct: 191 GIFGLKPTYGRLSRAGAYPFVGSLDHVGPFARSVRDIAAVYDILQGSDPADPVCTNRPPE 250 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L + I+G+ + + Y P + + A +++P A Sbjct: 251 LCLPQLSRGIEGLRIAVADGYFAQGAEP----EALAAVETVARALNCTATVTIPEAHRAR 306 Query: 312 PAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A ++I+ E A+ +LA LR +D F + R + G + Sbjct: 307 AAAFVITACEGANLHLA-------NLRSRPQD------------FDPATRDRFLAGALIP 347 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHI 429 + + Y++A++ R + E F Q VD+IL P TP A P+G E+ +G I Sbjct: 348 A-----TWYIQAQRFRQWYRDRVREIF-QNVDIILAPATPICAPPIGLEKMTIAGEEVVI 401 Query: 430 YND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +FT ++ GLP SVP +PLG+Q+I P+ E + V ++E E Sbjct: 402 RPNLGIFTQPLSFIGLPIASVPIQR-PNALPLGVQIIAAPYNEALILRVAAMLESE 456 >gi|330888642|gb|EGH21303.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. mori str. 301020] Length = 188 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/180 (47%), Positives = 127/180 (70%), Gaps = 5/180 (2%) Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHR 362 +P+ Q+A+PAYY+I+PAEASSNL+R+DGVR+G R E KD+ ++Y+ +R+ GFG EV+ R Sbjct: 1 MPNLQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRR 60 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IM+G Y LS+ YD++YL+A+KIR LIK DF AF + VDVIL PTTP A+ +G + N+ Sbjct: 61 IMVGAYALSAGYYDAYYLQAQKIRRLIKNDFMSAFAE-VDVILGPTTPNPAWKIGAKTND 119 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D +T+ N+AGLP +S+PA + +P+G+QL+ F+E L +V ++ Sbjct: 120 --PIAEYLEDFYTITANLAGLPGLSMPAGFVD-GLPVGVQLLAPYFQEGRLLNVAHQYQQ 176 >gi|70606200|ref|YP_255070.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] gi|68566848|gb|AAY79777.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] Length = 467 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 144/478 (30%), Positives = 231/478 (48%), Gaps = 61/478 (12%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPI 76 +++ S V+L+ + ++ + N+YI ++ +A AE+ ++ I G L G+PI Sbjct: 33 NRNQSPVDLIQHTLDKMKTDAEKFNSYITIIKDEALRHAEKLEEHIKRGIPTGPLSGLPI 92 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD TKGI T S I F P+Y +TV KL + A+++GK N+ FA G SN S Sbjct: 93 AVKDNIFTKGIRTTIASKIFREFYPNYNATVINKLLEADAIIVGKNNLHAFASGVSNLVS 152 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +GP +P T++ T G S G +S+ G S+GTDT GS+R PASF G +G Sbjct: 153 EFGPTRNPL----DTERITGGSSGGSASSVAFGS-VPISLGTDTVGSVRVPASFCGVIGY 207 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KP+ G SR G+ A SLD G++++TV D A++ I GYDE D++ VN+P Sbjct: 208 KPSNGLVSRYGLFPTAWSLDTIGVLSKTVLDVALISYFIMGYDENDSSTVNIP----RIN 263 Query: 257 LDQSIQGMTVGIPKEYRLDYL----SPTIDKTWQQG-ISWLKDAGAKIVEISLP-HTQYA 310 +D QG+ P+ L L ++K + +S L G K ++ T + Sbjct: 264 IDNVAQGVE---PRRITLGILVQESQTEVEKEFLDNVVSKLDSEGFKTERVNFDIETSHK 320 Query: 311 LPAYYIISPAEASSN---LARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + ++ A A ++R D +D+ E+ N SI + ++ I Sbjct: 321 ITTTIRLAEAAAFHKDLFMSREDDY-------PRDVAELIRNGMSIPAHEYIQSMI---- 369 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT----SAFPLGKEENNS 423 SR Y + DF F VD ++TPT P + +GKE + Sbjct: 370 ----SRKY-------------LISDFLRLFNH-VDAVITPTVPILPPKTNEIMGKELDYR 411 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ +T VN+ G PAIS+P+ +P+GLQ+IG+ + +E L + + +E Sbjct: 412 RTIIK-----YTGFVNLLGFPAISIPSVKLS-GLPIGLQIIGKIYHDEALLKIAKTVE 463 >gi|156742818|ref|YP_001432947.1| amidase [Roseiflexus castenholzii DSM 13941] gi|156234146|gb|ABU58929.1| Amidase [Roseiflexus castenholzii DSM 13941] Length = 477 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 137/494 (27%), Positives = 229/494 (46%), Gaps = 37/494 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + L F+ E R+R+ ++S VE+++++++ IE +N Q+NA I ++ ++A A +D Sbjct: 4 LHNLCFLTAVELMQRIRTHEVSCVEVMEAHLRQIERTNPQVNAIITLLPEQALERARAAD 63 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + GD L G+P+ KD TKG+ T S I F P + + +L GA+M+ Sbjct: 64 TALHRGDEVGPLHGLPVAHKDLVQTKGVRTTFGSPIYADFVPDVDDLIVIRLRKAGAIMI 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF GS +G +P+ D + T GGSSGG++ A+A + + G+D Sbjct: 124 GKTNTPEFGAGSQTFNPIFGATRNPY---DLSK--TCGGSSGGAAVALACGMIPIADGSD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PASF VG +P+ GR + +L G + RTV D+A++L AIAG Sbjct: 179 TGGSLRNPASFCNVVGFRPSPGRVPSCSDRAAWQTLSVLGPMARTVADTALMLSAIAGPH 238 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 C + P + + L++ +G+ V + + P + ++ L+ G I Sbjct: 239 PCSPIALQKPGAHFRQPLERDFRGVRVAWSRTLGGLPVDPQVTAVLEEARPALEAIGC-I 297 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQE 358 VE P A A+ + +L D R L+ + IL E R++ G + Sbjct: 298 VEEVEPDFSGADEAFRVWRAWSYEQSLGELADTHRDRLK---ETILGEIERGRALT-GPQ 353 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + + + R + Y R R+ F + + + PT FP+ + Sbjct: 354 IGY---------AERLRTALYHRMRR------------FMKTYEFLALPTVQVPPFPVEQ 392 Query: 419 E--ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 SG Y D +++ LPAISVPA +P+GLQL+G+ + + Sbjct: 393 PYVTEISGVPMETYIDWMRSCYFISITSLPAISVPAGFTRDGLPVGLQLVGRYRNDFGVL 452 Query: 475 SVGQIIEKEAGYFR 488 + E+ G++R Sbjct: 453 QLAHAFEQATGHWR 466 >gi|313902588|ref|ZP_07835988.1| Amidase [Thermaerobacter subterraneus DSM 13965] gi|313467154|gb|EFR62668.1| Amidase [Thermaerobacter subterraneus DSM 13965] Length = 619 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 150/511 (29%), Positives = 241/511 (47%), Gaps = 52/511 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ E + R + E+ + ++ +E + + A++ V A++A A A D+ + Sbjct: 134 LAGVSAGELVEAFRRGRMGVEEVTRAVLEQVETLDRDLRAFVTVTAEQALATARRRDEEL 193 Query: 64 IN-------------GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK 110 G L G+P+ +KD G+ T A S + G +TV ++ Sbjct: 194 ARWRRGGGGAGDGAGGGPGPLFGVPVALKDLIDLAGVPTTAGSRVRAGHVARESATVVRR 253 Query: 111 LWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 L GAV++GK EFA G++ +T ++GPV +PW S SSGGS A V Sbjct: 254 LEAAGAVIVGKTATHEFAFGATTDTPFHGPVHNPWNLEHSAGG-----SSGGSGAVVGAG 308 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 L ++GTDTGGSIR PA+ GTVG+KPTYGR SR G + + SLD G + TV D+A Sbjct: 309 LLPVALGTDTGGSIRIPAAACGTVGLKPTYGRVSRHGTVPLSWSLDHTGPLAGTVADAAR 368 Query: 231 LLKAIAGYDECD-----ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW 285 +L+ +AG D D AT L V + G+ VG+ + D + P +++ + Sbjct: 369 VLEVLAGPDPLDPATVPATAQGL-VEAAAAGAAGDLGGVRVGVLAAWARDRIHPEVEQAF 427 Query: 286 QQGISWLKDAGAKIVEI-SLPHTQYALPAYYIISPAEASSNLARYDGVRY---GLRVEGK 341 + L+ GA++VEI + PA +++ + LA +G Y L +G Sbjct: 428 AAALRHLQAMGAELVEIGGTGPGEGDFPAAGVLT--LVNRLLALAEGGAYHAATLARQGG 485 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 D + +EV+ R +G ++L+ YL A+++RT + R + Sbjct: 486 D------------YSREVRVRFELGQFLLA-----RDYLLAQRLRTELARRAAAVMAR-C 527 Query: 402 DVILTPTTPTSAFPLGKEE-NNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKM 457 V++ PT P A LG+ G+ + T N+ G P +SVP A+ + Sbjct: 528 HVLVAPTLPIPAPRLGQATWQPEGAGAEPVPEALIRLTAPFNVTGQPVLSVPVAIGPSGL 587 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 PL +Q+ G+ F E T+ VG +E+ G R Sbjct: 588 PLAIQIAGRAFDEATVLRVGAALERARGPLR 618 >gi|296536658|ref|ZP_06898727.1| amidase [Roseomonas cervicalis ATCC 49957] gi|296263010|gb|EFH09566.1| amidase [Roseomonas cervicalis ATCC 49957] Length = 471 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 152/500 (30%), Positives = 237/500 (47%), Gaps = 48/500 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ M + + R+R+++IS VE + + I ++ +++Y V+ ++A AAA +++ Sbjct: 1 MTALHEMELLDLTARIRAREISPVEATRAQLDRIGALDATLHSYALVLEEQAMAAARQAE 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G+ R L G P+ +KD G+ T A + I FRP ++TV +L GA++L Sbjct: 61 AEIARGEWRGPLHGAPVAVKDLCWMAGVPTAAGTTIHRDFRPAEDATVVARLRAAGAIIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKL M E A S++ P ++PW + T SS GS AA A LC S+G+D Sbjct: 121 GKLQMTEGAY-SAHHPEIPAP-LNPWGAAHWTGA-----SSSGSGAATAAGLCHGSLGSD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P + G G K T+GR SR G+ APSLD G +TR+V D+A +L AIAG D Sbjct: 174 TGGSIRFPCAANGLTGFKGTWGRVSRHGVFDLAPSLDHVGPMTRSVADAAAMLGAIAGED 233 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T ++PVPDY + + I G+ +G+ + + + + L GA++ Sbjct: 234 ARDPTAASVPVPDYLAGIGEGIAGLRIGLDPAWNAEGCDADTRAVVEAAANTLAALGAQL 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EI P + ++ + E ++ A R + E IL IG G V Sbjct: 294 TEIRFPDPSQVIRDWFPLCAVEVAAAHAATWPSR---QAEYGPILSAL-----IGQGHGV 345 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +D H + R+ R R A G+D++L P +A L + Sbjct: 346 T-------------AFDLHAIAMRR-RAFTAR--VNALFAGIDLLLVPVQAFAAPTLAR- 388 Query: 420 ENNSGSMGHIYNDV--------FTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 MG + D +T +M G PA+++P + + MP+G QLIG + E Sbjct: 389 ------MGDLGADAALMKGLLQYTCPFDMTGHPALTLPGGVTAQGGMPVGFQLIGPHWSE 442 Query: 471 ETLFSVGQIIEKEAGYFRPH 490 L G + + R H Sbjct: 443 ALLARAGHAYQSATAWHRRH 462 >gi|302526621|ref|ZP_07278963.1| predicted protein [Streptomyces sp. AA4] gi|302435516|gb|EFL07332.1| predicted protein [Streptomyces sp. AA4] Length = 494 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/423 (29%), Positives = 194/423 (45%), Gaps = 44/423 (10%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILD-GFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIP+ +KD A T A S +LD + + +L GAV+ GK Sbjct: 64 DRGPLHGIPVAVKDLLAADEGETTAQSLVLDRAWGLPGDGPAVARLRAAGAVLTGKTTTM 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF +G+ + T + +PWR + G +S ++ V G S+GTDT GSIR Sbjct: 124 EFGIGAPDRTKPFPLPRNPWRPTHYAGGSSSGSASAVAAGLVFG-----SLGTDTAGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G G+KPTYGR + G + AP D G + R+ D A+LL +AG D D + Sbjct: 179 YPAALCGVTGLKPTYGRVPKNGCVPLAPGFDHVGPLARSAEDCALLLTVLAGPDPGDPSS 238 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + PV DY L S+ G+ +G+ P D+ ++Q ++ L+DAGA+ + + LP Sbjct: 239 ADRPVEDYRGGLTGSLSGLRIGV---------VPHEDRVFEQAVAVLRDAGARTMPVELP 289 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 YY AE + ++GL E R +G + I Sbjct: 290 --------YY----AELKTV------TKFGLAAEAFAWHRTNLQRRWSDYGASTRMAIAK 331 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G V + + Y++ +++R +R F + VD+++TPT + G E + S Sbjct: 332 GALVSA-----ADYVQLQRVRRAGQRKLARLFTE-VDLVVTPTATS-----GAPEIAALS 380 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + T N G PA+SVP +PLGLQ+ G+PF E T+ + G ++ Sbjct: 381 TSGMAETALTSYWNAVGNPALSVPMGFTGDGLPLGLQIAGRPFDEATVLAAGHAYQQRTS 440 Query: 486 YFR 488 + R Sbjct: 441 WHR 443 >gi|240047293|ref|YP_002960681.1| amidase [Mycoplasma conjunctivae HRC/581] gi|239984865|emb|CAT04857.1| Glutamyl-tRNA amidotransferase subunit A [Mycoplasma conjunctivae] Length = 437 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 128/414 (30%), Positives = 212/414 (51%), Gaps = 29/414 (7%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ FAT + S L F+P Y +T+ +KL + GA L K + DE +G S Sbjct: 43 IKENFATSQGVSHGSSKSLINFQPSYNATIFEKLVNAGAKPLFKTHNDELGLGGKGLFSA 102 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G + +P +D++ GGSS GS+A + + +I +DTG SIR+PASF G VG K Sbjct: 103 FGEIYNP---LDASK--LVGGSSSGSAATLN--YVSFAIASDTGDSIRRPASFIGKVGFK 155 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PTYG SR G+ S+A SLD G ++ V DS + K G DE D T + + V + + Sbjct: 156 PTYGAVSRYGLFSYATSLDTVGWLSHNVADSIEVAKVAFGRDEKDLTSIAISVANASKQK 215 Query: 258 DQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA--- 313 + I K + + L IDK + I VEI P T+ L A Sbjct: 216 PKKIAVFNFENEVKSFVNEQLFKLIDKLRNEEIE---------VEIIKPDTK-ILSAISI 265 Query: 314 -YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y I+S AE +SNL+ +G+ + + + ++ +TRS GFG ++ R++ G+Y L Sbjct: 266 VYKIVSYAEVTSNLSAINGISFAHAPKNQSWEQIMFDTRSSGFGLVLQKRLIWGSYFLKE 325 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-GKEENNSGSMGHIYN 431 + L+A+K+R +I ++ + F + D+++ P+ + A + GK E++ I + Sbjct: 326 ENQKKYLLKAKKVRRII-ANYYKKFLENYDIVIFPSYYSIAPDIQGKNEDDE---SKITS 381 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ T++ N+ G P++S+P + +P + + +E L S IE++ G Sbjct: 382 NILTIS-NLTGNPSLSIPLGKYQ-GLPFNITIDANLKEDEKLLSFALYIEEKIG 433 >gi|167044326|gb|ABZ09004.1| putative amidase [uncultured marine crenarchaeote HF4000_APKG6C9] Length = 275 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/258 (39%), Positives = 148/258 (57%), Gaps = 5/258 (1%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + +++ + + E + ++ I + +++A++ V + A E K N + G Sbjct: 12 NSIKNDEFTVEEFILKSLERINQVDEKLHAFLRVNDLVIKNAREIDTKIKSNQNVGKCYG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI +KD +G T S +L+ F Y STV KL A+++GK N+DEFAMG S Sbjct: 72 MPISVKDNICIEGSKTTCASKVLENFVAPYTSTVISKLNSEDAIIIGKTNLDEFAMGLST 131 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S YGP +PW + + PGGSSGGS +V+ C AS+G+DTGGSIR PASF Sbjct: 132 EFSAYGPSRNPWNT-----DYVPGGSSGGSGVSVSANECIASLGSDTGGSIRNPASFCSV 186 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYG SR G++S+A S++Q G +T+TV DSA LL I+G D D T V+ DY Sbjct: 187 VGLKPTYGLVSRYGLVSYANSIEQIGPLTKTVEDSAFLLNIISGIDSNDNTTVDNKNQDY 246 Query: 254 ERALDQSIQGMTVGIPKE 271 +D I G +GI E Sbjct: 247 LNNIDAGISGKKIGIVTE 264 >gi|118468365|ref|YP_884898.1| amidase [Mycobacterium smegmatis str. MC2 155] gi|118169652|gb|ABK70548.1| amidase [Mycobacterium smegmatis str. MC2 155] Length = 509 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 132/434 (30%), Positives = 220/434 (50%), Gaps = 26/434 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ S L+GF P ++T+ ++ GA + GK ++ Sbjct: 85 LAGRRVAVKDNTAVAGVPMMNGSAALEGFIPDTDATIISRMLAAGATIAGKAVCEDLCFS 144 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS GPV +PW D T T GGSS GS+A VA + + G D GGS+R PA+F Sbjct: 145 GASHTSATGPVRNPW---DPTR--TSGGSSSGSAALVAAGIVDIATGGDQGGSVRLPAAF 199 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TCVNLP 249 TG VG KPT+G G +LD G +TRTV D+A+LL +AG D D + Sbjct: 200 TGIVGHKPTHGLVPYTGAFPIEQTLDHLGPMTRTVADAALLLGVLAGRDGLDPRQPTRVA 259 Query: 250 VPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VPDY L + + GM VG+ E + P +D ++ + L+ G + +S+P + Sbjct: 260 VPDYVAELKRPVAGMRVGVLCEGFGHPEAVPGVDDAVRRAVDVLRAQGMQCENVSIPWHR 319 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRSIG---FGQEVKHR 362 + + +I+ A++ + DG YG+ +G ++E + + R VK Sbjct: 320 HGRKIWDVIAVEGATTQMV--DGNAYGMNWQGAYDPALIEFFGSRRQADGTLLPDTVKLV 377 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-----G 417 ++ G + + R + +HY +AR + ++ + +A + DV++ PTTP A P+ Sbjct: 378 LLTGRHTI-RRHHGAHYAKARNLVPRLRAAYDDALSR-FDVLVMPTTPLVATPIPESDAP 435 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++E + ++ + N T ++++G PA SVPA L + +P G+ ++G+ F + T+ V Sbjct: 436 RDEYLARALEMMAN---TAGLDVSGHPACSVPAGLVD-GLPTGMMIVGRHFDDATVLRVA 491 Query: 478 QIIEKEAGYFRPHK 491 E+ G F P K Sbjct: 492 HAYEEATGGFLPAK 505 >gi|10955019|ref|NP_059675.1| indole acetimide hydrolase [Agrobacterium tumefaciens] gi|61226432|sp|P0A2X0|HYIN_AGRTU RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|61226433|sp|P0A2X1|HYIN_AGRT4 RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|61226435|sp|P0A2X2|HYIN_AGRT9 RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|39066|emb|CAA25166.1| unnamed protein product [Agrobacterium tumefaciens] gi|39177|emb|CAA25116.1| unnamed protein product [Agrobacterium tumefaciens] gi|455373|gb|AAA92549.1| tms2 [Plasmid Ti] gi|8572676|gb|AAF77122.1| iaaH [Agrobacterium tumefaciens] Length = 467 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 147/494 (29%), Positives = 236/494 (47%), Gaps = 55/494 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++++S + L+ KD S +ELV++ I E + S +NA + R +A++ D+ +G+ Sbjct: 6 SLAQSLEHLKRKDYSCLELVETLIARCEAAKS-LNALLATDWDGLRRSAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S V ++L+ GA+ NM E Sbjct: 62 AGVGLCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPWNP-----DLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT GR II +P+ D GII + V D IL + I+G E Sbjct: 177 PAALCGVVGFRPTLGRYPGDRIIPVSPTRDTPGIIAQCVADVVILDRIISGTPERIP--- 233 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 PVP ++G+ +G+P Y D L + + I L + G VE ++PH Sbjct: 234 --PVP---------LKGLRIGLPTTYFYDDLDADVALAAETTIRLLANKGVTFVEANIPH 282 Query: 307 T-QYALPAYYIISPAEASSNLARY--DGVRYGLRVEGKDILEMYE--NTRSIGFGQEVKH 361 + A + ++ E L +Y D V+ V D+++ + +I Q H Sbjct: 283 LDELNKGASFPVALYEFPHALKQYLDDFVK---TVSFSDVIKGIRSPDVANIANAQIDGH 339 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSAFPLGKEE 420 +I Y L+ H R R ++ + F+ +D IL PT P A P+G++ Sbjct: 340 QISKAEYELA-----RHSFRPR-----LQATYRNYFKLNRLDAILFPTAPLVARPIGQDS 389 Query: 421 N--NSGSMGHIYNDVFTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + ++G+M D F + V + AGLP +S+P L ++P+G+++ G ++ Sbjct: 390 SVIHNGTM----LDTFKIYVRNVDPSSNAGLPGLSIPVCLTPDRLPVGMEIDGLADSDQR 445 Query: 473 LFSVGQIIEKEAGY 486 L ++G +E+ G+ Sbjct: 446 LLAIGGALEEAIGF 459 >gi|198283059|ref|YP_002219380.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666192|ref|YP_002425270.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247580|gb|ACH83173.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518405|gb|ACK78991.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 465 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 150/489 (30%), Positives = 237/489 (48%), Gaps = 55/489 (11%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F E R+RS + AVE+V ++ I N ++NA+ V +A AE D+++ Sbjct: 8 FPQAQEIAQRVRSGEWRAVEVVQDTLRHIHARNGEINAFTCVTEARALREAEAVDQKVAR 67 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHI--LDGFRPHYESTVTQKLWDNGAVMLGKL 122 G D L G+P +K+ F +G T A S I D ++T ++L GAV++G L Sbjct: 68 GEDPGPLAGVPFAVKNLFDLQGEITLAGSKINRKDAL-AVADATAVRRLTAAGAVLVGAL 126 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NM E+A + E +YGP +P + T SSGGS AAVA + ++G+DT G Sbjct: 127 NMGEYAYDFTGENIHYGPSRNPHDRLRMTGG-----SSGGSGAAVAAGMVPIALGSDTNG 181 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+S G G+KPTYGR SR G F PSLD G + R+V D A+ A+ G D D Sbjct: 182 SIRVPSSLCGIFGLKPTYGRLSRAGAFPFCPSLDHVGPLARSVADLALAYDAMQGADAAD 241 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE- 301 C + +L + G+ + I Y + QQ S + A A++ Sbjct: 242 PVCADRATEPVSGSLADGVAGLKIAIAAGYFM-----------QQATSAAEQALARVAAA 290 Query: 302 ------ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + +P T A A Y+I+ AE SSNL D +R+ + + Sbjct: 291 LNVTDLVEIPGTAQARAAAYLITNAE-SSNL-HLDRLRH----------------HAADY 332 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +V+ R++ GT + + S ++A++ R + + + F + D++L P TP SA Sbjct: 333 DPDVRDRMLAGTLLPA-----SWNIQAQRFRRWYRAEVLKVFAR-YDLLLAPATPMSAPA 386 Query: 416 LGK---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 +G+ E + M + ++T ++ GLP + VP A MP+G+Q+I P++E Sbjct: 387 IGQRYMELDGEQMMVRPHLGLYTQPLSFIGLPVVVVPVA-SAGAMPIGVQIIAAPWQEAR 445 Query: 473 LFSVGQIIE 481 +F V + +E Sbjct: 446 IFKVARELE 454 >gi|167760780|ref|ZP_02432907.1| hypothetical protein CLOSCI_03165 [Clostridium scindens ATCC 35704] gi|167661667|gb|EDS05797.1| hypothetical protein CLOSCI_03165 [Clostridium scindens ATCC 35704] Length = 394 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 129/418 (30%), Positives = 200/418 (47%), Gaps = 41/418 (9%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 E I + D KG + S IL GF+P + + ++L NG ++ GK ++ EF + Sbjct: 10 ENGAIAVDDSILVKGAESTYGSKILMGFKPLFSAEAVERLEKNGYLVSGKCHVGEFGLDL 69 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 E S+Y + G ++A VA A++G D G+ R+ A+ Sbjct: 70 VGEFSHYAQEDTKLE--------------GAAAALVAKSDVKAALGVDVNGAPRRAAALA 115 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 +KPTYG SR GIIS A S +Q G+ + ++ AIAG+D+ D T +L Sbjct: 116 NVDFLKPTYGTVSRYGIISTAASGEQVGVYAPDTQGVKEVMGAIAGHDDKDGT--SLRTQ 173 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI----SWLKDAGAKIVEISLPHT 307 YE D+ I G V I KE L D Q+ + L D G + EIS Sbjct: 174 TYEYHTDEDIAGKRVCIVKE-----LLEIADADTQENVRAFAKKLTDKGVTVEEISCDFF 228 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 + A A+ I+ AE +N++R+DGV+YG R E K+I E+Y N+R+ GF K I+ G Sbjct: 229 EMANTAWQILMSAETCNNISRFDGVKYGRRAENYKNIDELYVNSRTEGFNFLTKAVILYG 288 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + VLS Y Y ++ +IR ++ F A + D +LTP +++ + + + Sbjct: 289 SDVLSKNRYKDCYDKSLRIRRVVAEKFA-ALMKEYDAVLTPACSKTSY---ERYDIYAAF 344 Query: 427 GHIYND-VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +Y + +FT N+ G+P AL +K +QL+G F E L S+ +EKE Sbjct: 345 EKVYEESIFTSVANLIGIP------ALVSRK----VQLMGGHFSESILLSMAGAVEKE 392 >gi|167042284|gb|ABZ07014.1| putative amidase [uncultured marine microorganism HF4000_ANIW93N21] Length = 472 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 152/490 (31%), Positives = 238/490 (48%), Gaps = 42/490 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + + R+ L ++ +S+ EL + +++ IE N ++NAY+ V +A AAA+ +D+ Sbjct: 4 TDLLYTPAWQLRELLDTRRVSSTELTEMFLRRIERLNPKLNAYLTVTGDEALAAAKAADE 63 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +I G L GIPI +KD ATKGI + S P +S V +++ +GAV+LG Sbjct: 64 KIGQGQENGPLLGIPISLKDLEATKGIRSTMGSQAYQDTIPEMDSVVAERVKASGAVLLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF + + E P +PW + + T GGSSGG+ AAVA +C + GTD Sbjct: 124 KTNTPEFGLQGTTENRLGNPCRNPWNT-----ERTAGGSSGGAGAAVAAGMCPFATGTDG 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISF-APSL-DQAGIITRTVRDSAILLKAIAGY 238 GGSIR P+SF G GIKPT GR R G + AP+L Q+G + R VRD+AILLK +AG+ Sbjct: 179 GGSIRNPSSFNGIFGIKPTLGRVPRAGGLGRPAPNLTSQSGPMARNVRDAAILLKVLAGH 238 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + VPD+ LD ++G+ + + P + + ++ G Sbjct: 239 DSRDPGSMRDSVPDFLAGLDNGVRGLRLAWSTGMGYATIDPEVASITSEAARVFEELGCT 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDG--VRYG-LRVEGKDILEMYENTRSIGF 355 + + PA+ + P A + Y G YG L E D ++ +N R F Sbjct: 299 VED----------PAFVLDDPVPAFLTIF-YTGNYTSYGHLMDECPD--KLTDNAR---F 342 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 E + Y + R D ++AR D + + D++LTPT FP Sbjct: 343 CFEHGSQATAADYARAIRSVDE--MKAR------IDDLMDTY----DLLLTPTMAVPPFP 390 Query: 416 LGKEENNSGSMGHIYNDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 +G+ + + T N++G PA S+P + +P+GL +IG+ E T Sbjct: 391 IGQPPDRIDGKDVPPRSSYSPMTRPFNLSGQPAASIPCGFSSEGLPIGLHIIGKRGDEAT 450 Query: 473 LFSVGQIIEK 482 + E+ Sbjct: 451 VLRASAAFEQ 460 >gi|4836568|gb|AAD30488.1|AF126446_3 indole-3-acetamide hydrolase [Agrobacterium tumefaciens str. C58] Length = 466 Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 145/493 (29%), Positives = 230/493 (46%), Gaps = 54/493 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV + I + + +NA + R A++ D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVKTLIARCQAAKP-LNALLATDWDGLRRTAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P+ S V Q L+ G + NM E Sbjct: 62 AGLGLCGIPLCFKGNIATGIFPTSAATPALINHLPNIPSRVPQTLFSAGPLPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPWNP-----SLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT R R II +P+ D AGII + V D IL + I+G + Sbjct: 177 PAALCGVVGFRPTLARYPRDRIIPVSPTRDTAGIIAQCVADVIILDQVISGR-----SAK 231 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 232 ILPMP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGL---RVEGKDILEMYENTRSIGFGQE 358 + +LP P L + G L R+ D+ + Q Sbjct: 283 LEELNSGASLPIALYEFPHALKKYLDDFVGTFLFLTFQRIRSPDVANIVS-------AQI 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 H+I Y L+ + + R R T R++ ++ +D IL PT P +A +G+ Sbjct: 336 DGHQISNDEYELARQSF-----RPRLQATY--RNYFRLYQ--LDAILFPTAPLAAKAIGQ 386 Query: 419 EEN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 E + ++GSM + + ++ V+ AGLP +S+PA L ++P+G+++ G + L Sbjct: 387 ESSVIHNGSMMNTFK-IYVRNVDPSSNAGLPGLSLPACLTPDRLPVGMEIDGLAGSDHRL 445 Query: 474 FSVGQIIEKEAGY 486 ++G +EK + Sbjct: 446 LAIGAALEKAINF 458 >gi|33598597|ref|NP_886240.1| putative amidase [Bordetella parapertussis 12822] gi|33574726|emb|CAE39383.1| putative amidase [Bordetella parapertussis] Length = 442 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 133/420 (31%), Positives = 203/420 (48%), Gaps = 48/420 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSH-ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD G+ T S + ++ V +L GA+++GK N EFA Sbjct: 65 LHGIPVAVKDLIDVAGMRTTMGSQQYANQASAERDAQVVARLRAEGAIIVGKTNTHEFAY 124 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + + SY+G +P T SS GS+AA+ LCAA++GTDT SIR PA+ Sbjct: 125 GPTGDRSYFGAACNPRDPARMTGG-----SSSGSAAALGAGLCAAALGTDTSASIRLPAA 179 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+KPTY R G + +LD G ++ TVRD+A+LL A+AG P Sbjct: 180 LCGVVGLKPTYDLLPRAGAFDLSQTLDHIGPMSATVRDNAVLLDALAGQ----------P 229 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y R QS++G TVG+ + LDYL + + +Q + AGA++V I + Q Sbjct: 230 AHSYARLAGQSVRGRTVGLATGFYLDYLDAPVRQALEQAQEAFRQAGAQVVPIEIAQVQA 289 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A ++ EA + + T + + EV+ R++ G V Sbjct: 290 IYEAQQLVLKTEAYAR-------------------HLRALTTNAPYQDEVRARLLTGADV 330 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L+ YL+A +R + +R F E Q VDV+L PT +A PL +++ + G Sbjct: 331 LA-----VDYLQAMAMRAVARRAFDETLAQ-VDVLLCPTCGLTA-PL-RDQRTTALDGQE 382 Query: 430 YNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 Y+ T N++G P++SVP + +P+ +QLIG+ E L+ GQ +E A Sbjct: 383 YSTTWLLTRLTAPTNLSGHPSLSVPFGADSQGLPISMQLIGRHLDEAVLYQFGQALEDAA 442 >gi|163846950|ref|YP_001634994.1| amidase [Chloroflexus aurantiacus J-10-fl] gi|222524774|ref|YP_002569245.1| amidase [Chloroflexus sp. Y-400-fl] gi|163668239|gb|ABY34605.1| Amidase [Chloroflexus aurantiacus J-10-fl] gi|222448653|gb|ACM52919.1| Amidase [Chloroflexus sp. Y-400-fl] Length = 528 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 150/492 (30%), Positives = 229/492 (46%), Gaps = 52/492 (10%) Query: 3 ELN-FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +LN M V+E R + +S+VE+V+ ++ I ++++NA+ V+A+ A A A +D Sbjct: 78 DLNTIMGVAEE---FRKRTLSSVEVVEWALEQIAEKDARLNAFQIVMAESALADARAADA 134 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G R L G+PI +KD F G T A S I G +STV +L GA+++G Sbjct: 135 EIRAGTIRSPLHGVPIAVKDLFDVAGYPTAAGSRIRAGVMASSDSTVVARLRAAGAIIIG 194 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K M EFA + ++YGP +P+ D S + + V + A+IGTDT Sbjct: 195 KTRMSEFAYSPGSNNAHYGPTANPYHP--ERDSGGSSSGSAVAVSTVMAY---AAIGTDT 249 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G VG+KPT+GR S G + SLD AG + R+V D+A++L+AIAG D Sbjct: 250 GGSIRIPAAHCGIVGLKPTHGRVSLAGGFPLSWSLDHAGPLARSVADAAVILQAIAGPDP 309 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK-----TWQQGISWLKDA 295 D + P L I + +G+ D I Q+ L + Sbjct: 310 RDHRTLRPESPFAVSGLLDYIDQVRIGL---LTADGSGQAITDAAGLAAMQRVADALAER 366 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA ++ I +P L A +++PA + A + +R + Sbjct: 367 GATVIPIEVPE----LEALRLLNPALLAIEAAAL--------------HLPWLRSRLDEY 408 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+ ++ RI+ ++ S +R ++ R ++R E G+DV++TP TP A Sbjct: 409 GEFMRQRIL-AAFIYSP----VDAVRVQQARANLRRRVAERL-AGIDVLITPVTPGPAPA 462 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG S FT N G PA+S+P E +P QLI +P+ E L Sbjct: 463 LGVPTPTS----------FTGPWNFLGWPALSLPTGREENGLPRAAQLIARPWCESLLLR 512 Query: 476 VGQIIEKEAGYF 487 V Q E G+ Sbjct: 513 VAQHAEDFIGHL 524 >gi|284167562|ref|YP_003405840.1| amidase [Haloterrigena turkmenica DSM 5511] gi|284017217|gb|ADB63167.1| Amidase [Haloterrigena turkmenica DSM 5511] Length = 505 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 133/419 (31%), Positives = 206/419 (49%), Gaps = 19/419 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G +G+KD G+ S + +G+ P ++T+ +L D GA + GKLNM++ A Sbjct: 94 LAGYEVGLKDNVNVAGVELTLGSKLFEGYVPSTDATIVTRLLDAGATITGKLNMEDMAFS 153 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S E S GPV++P S D G SSG ++A G + A IG D GGSIR PA++ Sbjct: 154 GSGELSATGPVLNPVDS----DYIAGGSSSGSAAAVGNGDVDVA-IGGDQGGSIRIPAAW 208 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPT+G GI S D AG + TV D A +L IAG D D +P Sbjct: 209 SGIVGHKPTHGLVPYTGIAGLGRSFDHAGPMCSTVEDCARVLDVIAGKDGLDPRQGEVPT 268 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY AL +TVG+ +E + + P +D+T + ++ +DAGA + +S+P Sbjct: 269 DDYLEALSDDPSDVTVGVVEEGFGRETSEPGVDETVRDALADFEDAGATVEAVSVPMHVD 328 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR---SIGFGQEVKHRIMIG 366 L + I+ E S+ + YG + E + R + + +K +++G Sbjct: 329 GLTIWNAIALEETSATVDGECVGHYGNGFYDTQLAEAFGRARRAHADDYITTLKLTLVLG 388 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP----LGKEENN 422 Y LS +Y +A+ + + ++ EA E +DV+ PTTP +A + + E Sbjct: 389 EY-LSDEYRGRYYAKAQNLSRKLAAEYDEALED-IDVLAMPTTPQTAHEVDETISRVEAI 446 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ ++N T ++ G PAISVPA +P GL LIG F + T+ S + E Sbjct: 447 ERALNMLHN---TSPFDVTGHPAISVPAGTA-GGLPAGLMLIGDRFDDATVLSSARAFE 501 >gi|299138581|ref|ZP_07031759.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298599217|gb|EFI55377.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 542 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 168/298 (56%), Gaps = 7/298 (2%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-K 61 +L+ M+++E + + +K I++ +LV + + I N ++N Y+ V+A++A A + D + Sbjct: 41 KLSAMSLTEVSEMVHNKTITSTQLVKALLDRINVYNPKVNCYVTVMAKEALGQAAQLDAE 100 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + N L GIPI +KD T G T A S + P ++ + ++L GA++LGK Sbjct: 101 QKANKFRGPLHGIPIALKDNIDTAGTRTTAASPMFKDRVPTEDADIVRRLKGAGAIILGK 160 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LN+ EFA+G + + SY+GP +PW + ++ GGSS GS AAV+ L ++GTDTG Sbjct: 161 LNLHEFALGCTGDISYFGPTRNPW-----SLEYVTGGSSAGSGAAVSAALVYGALGTDTG 215 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+++ G VG+KPT G S GII LD G + RTV D A++L + GYD Sbjct: 216 GSIRCPSAWCGIVGLKPTVGLVSIRGIIPCTADLDHCGPMARTVEDVALMLGQMTGYDSL 275 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V DY +A+ Q + +G P+ + D+L P IDK + + L A + Sbjct: 276 DIFSVQSTPEDYVKAMKQPVSSFRLGTPQSF-YDHLDPEIDKAVKAALEVLTKLTAGV 332 >gi|261855455|ref|YP_003262738.1| amidohydrolase, AtzE family [Halothiobacillus neapolitanus c2] gi|261835924|gb|ACX95691.1| amidohydrolase, AtzE family [Halothiobacillus neapolitanus c2] Length = 464 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 142/482 (29%), Positives = 225/482 (46%), Gaps = 47/482 (9%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDA 68 +E D D SAVE+ ++ + IE NS +NA+ E+ A + R AE D R N Sbjct: 10 TECVDAFTRGDCSAVEIAEATLARIEMVNSTLNAFTEITAPRMRREAELVDSARRQNQPL 69 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEF 127 L +P +K+ F +GI T A + + + P ++ + KL G ++ G LNMD + Sbjct: 70 GPLAAVPYAVKNLFDVEGITTLAGAKLYEQCPPASRDADLVNKLNRAGGLLAGTLNMDAY 129 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + E S+YG +P + S SSGG+ AAVA L + +DT GSIR P Sbjct: 130 AYGFTTENSHYGATHNPRNTTRSAGG-----SSGGTGAAVAAGLVPIGLASDTNGSIRVP 184 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 +S G G+KPTYGR SR G F SLD G + T D A+ A+ G D D C Sbjct: 185 SSLCGVFGLKPTYGRLSRTGTQMFVSSLDHLGPLATTTEDLALAYDALQGSDPLDPACAL 244 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV----EIS 303 P+ R L+Q I G+ R+ L+ D+ W A+++ EI Sbjct: 245 RPIEPTRRGLNQDIDGL--------RIARLTGYFDEHAGPQALWASQTAARVLGASREIE 296 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP A A Y+I+ +E+ G Y R+ + ++++E + R+ Sbjct: 297 LPGVAAARSAAYLITASES--------GALYQDRLRTQ--IDLFEPLS--------RDRL 338 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G+ + + + Y +A + R F + VDV++ P TP +A LG+ Sbjct: 339 IAGSLIPA-----AWYQQALRYRRWYLERVMHLF-RDVDVLIAPATPITAPLLGQPSFTL 392 Query: 424 GSMGHIYND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G+ + T ++ GLP +++ E +P+GLQ+I P+RE+ V +++ Sbjct: 393 GNREFATRPNMGLLTQPISFIGLP-VAIAPLWPEGGLPMGLQIIAPPWREDLCLHVARVL 451 Query: 481 EK 482 E+ Sbjct: 452 EQ 453 >gi|4836573|gb|AAD30492.1|AF126447_3 indole-3-acetamide hydrolase [Agrobacterium vitis] Length = 472 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 145/491 (29%), Positives = 234/491 (47%), Gaps = 49/491 (9%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E+ + LR K S EL ++ I E + S +NA + R A++ D+ +G Sbjct: 6 SIKETLECLRLKKYSCSELAETIIARCEAAKS-LNALLATDWDYLRRNAKKVDE---DGS 61 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A + L GIP+ K AT A + L P + V + L D GA++ NM E Sbjct: 62 AGEGLAGIPLCFKANIATGIFPASAATPALMKHLPTTPAGVVKPLLDAGALIGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVAG L A IGTDTG S+R Sbjct: 122 LSFGITSNNHATGAVKNPWDP-----ALIPGGSSGGVAAAVAGRLMLAGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G VG +PT GR I+ +P+ D AGII ++V D +L + I C Sbjct: 177 PASLCGVVGFRPTIGRYPGDRIVPVSPTRDTAGIIAQSVPDVILLDQII-----CGKLTT 231 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + PVP ++G+ +G+P Y D L P + Q I+ L G V+ +P Sbjct: 232 HQPVP---------LEGLRIGLPTTYFYDDLEPDVAVASQTIITLLASKGVTFVKAEIPD 282 Query: 307 TQYALPAY-YIISPAEASSNLARY--DGVRYGLRVEGKDILEMYENT--RSIGFGQEVKH 361 Q + I+ E L +Y D V+ V D+++ +T I Q +H Sbjct: 283 LQRLNNGVSFPIALYEFPFALQKYIDDFVK---DVSFSDVIKGISSTDVAKIVNAQIEEH 339 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEE 420 +I +Y + +C +R ++ + + F+ +D IL PT P +A P+G++ Sbjct: 340 QIPEASYQSALKC----------LRPKLQAAYYDYFKLHQIDAILFPTAPLTAKPIGQDL 389 Query: 421 N--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + ++G M + +F V+ AGLP +S+P +L K +P+G+++ G ++ L + Sbjct: 390 SVMHNGVMADTFK-IFVRNVDPGSNAGLPGLSLPVSLTSKGLPIGMEIDGLAGMDDRLLA 448 Query: 476 VGQIIEKEAGY 486 +G +E+ + Sbjct: 449 IGAALEEAIAF 459 >gi|190572974|ref|YP_001970819.1| amidase [Stenotrophomonas maltophilia K279a] gi|190010896|emb|CAQ44505.1| putative amidase [Stenotrophomonas maltophilia K279a] Length = 540 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 155/505 (30%), Positives = 246/505 (48%), Gaps = 46/505 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V++ + R+ + D+ + L +Y+Q A++ + ++ A IE+ + AA +R Sbjct: 50 VADLQARMTAGDLDSTTLTQAYLQRIAALDRTGPRLRAVIELNPDALKEAAARDRERREG 109 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIP+ +KD + T A S L GFRP ++ + ++L + GAV+LGK N+ Sbjct: 110 RLRGPLHGIPLLLKDNINAAPMVTSAGSLALQGFRPD-DAYLVRRLREAGAVVLGKTNLS 168 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A N++ IS W + + +P GSS GS+ AVA L + +IGT+ Sbjct: 169 EWANFRGNDS------ISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTE 222 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ G VG+KPT G SR GI+ + S D AG +TR+V D+A +L AIAG D Sbjct: 223 TDGSIVCPAAINGVVGLKPTVGLVSRDGIVPISFSQDTAGPMTRSVADAAAVLTAIAGRD 282 Query: 240 ECDATCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLK 293 + D +P V DY LD Q ++G +G+ + L Y + P ID Q + L+ Sbjct: 283 DADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLID----QAATELR 338 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDI-LEMYENTR 351 AGA +V + LP+ A + E + L RY R LR + I + + Sbjct: 339 RAGAVVVPVELPNQGAWAEAERTLLLYEFKAGLERYFSAHRAPLRSLAELIAFNQAHSKQ 398 Query: 352 SIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARK-IRTLIKRDFTEA--FEQGVDVILTP 407 +G FGQE ++ ++ D Y+RAR R L + +A +D ++ P Sbjct: 399 ELGLFGQE-----LLVEADATTGLADPAYIRARSDARRLAGPEGIDAALAAHQLDALVAP 453 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 TT A+P+ E ++ G Y+ A +AG P+++VP +P+GL +G Sbjct: 454 TT-GVAWPIRSEGDD--FPGESYS-----AAAVAGYPSLTVPMGQI-NGLPVGLLFMGTA 504 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 + E L + E+ RP + Sbjct: 505 WSEPKLIEMAYAYEQRTRARRPPHF 529 >gi|300718461|ref|YP_003743264.1| Amidase [Erwinia billingiae Eb661] gi|299064297|emb|CAX61417.1| Amidase [Erwinia billingiae Eb661] Length = 448 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 140/491 (28%), Positives = 222/491 (45%), Gaps = 52/491 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++E LR ++S E+ + Y+ I N ++NA++ V AQ AA+ D + Sbjct: 5 FSPIAELAAALRRGELSCEEIAEFYLARIARYNDKLNAFVTVFAQTMLTAAQGQDLLLKA 64 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G D L+G+P+GIKD +G A S L R + + +L +GAV+ GK + Sbjct: 65 GVDLGPLQGMPLGIKDLLHWRGTPCSASSRQLPDSRSTHTAPAVTRLLQHGAVIAGKTQL 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA G G +PW D PGGSS GS+ AVA L A+IGTDTGGS+ Sbjct: 125 VEFAFGGWGINQSAG---TPWNPWDCDVHRVPGGSSSGSAVAVAAGLVPAAIGTDTGGSV 181 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+ G VG+KPT R SR G I + +LD G +T TV D+ ++ ++++G + A Sbjct: 182 RIPAALNGLVGLKPTQNRISREGCIPLSTTLDSIGPLTHTVADAELIYRSMSGDTQRLAV 241 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L V I+ T+G + P I ++ L +AG + I L Sbjct: 242 ADTLKV--------AFIEPDTLGA-------AIDPEIVAALEKTQRRLSEAGISVTRIKL 286 Query: 305 PHTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + L A IIS AEA + ++++ + + + +++ H Sbjct: 287 PFSWTGLSARSGEIIS-AEAWA--------------WHREMMTSHRDRYNPLTAEKLLHG 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I LR R+ + + + + D++L PT +A P+ + Sbjct: 332 AAINKESFEG------LLRQREQHIGLFHELMDDW----DILLMPTLAITACPVDEVNEQ 381 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ + T AVN AI++P AL + MP+G QL+ E L ++ +E Sbjct: 382 QATLA-----LLTRAVNYLDGCAITLPVALSSEGMPIGAQLVANYHHESQLLAMAHRLEA 436 Query: 483 EAGYF-RPHKW 492 G+ +P W Sbjct: 437 LTGWHQQPAGW 447 >gi|16119822|ref|NP_396527.1| indole acetimide hydrolase [Agrobacterium tumefaciens str. C58] gi|5042194|emb|CAB44639.1| IAH [Agrobacterium tumefaciens] gi|15163472|gb|AAK90968.1| indole acetamide hydrolase [Agrobacterium tumefaciens str. C58] Length = 467 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 144/492 (29%), Positives = 234/492 (47%), Gaps = 51/492 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV++ I + + +NA + R +A++ D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVETLIARCQAAKP-LNALLATDWDGLRRSAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S V ++L+ GA+ NM E Sbjct: 62 AGLGLCGIPLCFKANIATGIFPTSAATPALINHLPKIPSRVAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPWNP-----SLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT R R II +P+ D AGII + V D IL + I+G + Sbjct: 177 PAALCGVVGFRPTLARYPRDRIIPVSPTRDTAGIIAQCVADVIILDQVISGRSAKIS--- 233 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 234 --PMP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE--NTRSIGFGQEV 359 + +LP P L + G V D+++ + +I Q Sbjct: 283 LEELNSGASLPIALYEFPHALKKYLDDFVGT-----VSFSDVIKGIRSPDVANIVSAQID 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H+I Y L+ + + R R T R++ ++ +D IL PT P +A +G+E Sbjct: 338 GHQISNDEYELARQSF-----RPRLQATY--RNYFRLYQ--LDAILFPTAPLAAKAIGQE 388 Query: 420 EN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++GSM + + ++ V+ AGLP +S+PA L ++P+G+++ G + L Sbjct: 389 SSVIHNGSMMNTFK-IYVRNVDPSSNAGLPGLSLPACLTPDRLPVGMEIDGLAGSDHRLL 447 Query: 475 SVGQIIEKEAGY 486 ++G +EK + Sbjct: 448 AIGAALEKAINF 459 >gi|307331180|ref|ZP_07610306.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306883189|gb|EFN14249.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 542 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 158/520 (30%), Positives = 241/520 (46%), Gaps = 65/520 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++E R R+ + A L Y+ I+ + ++A IE+ R E+ + Sbjct: 50 LEELGITELRRRMNDGQLDAERLTRYYLDRIDRIDPLLHAVIELNPDALR----EARRLD 105 Query: 64 INGD-ARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 GD R L G+PI +KD T +HT A S L G RP ++TV +L GAV+LGK Sbjct: 106 AEGDLGRPLHGMPILLKDLVETADRMHTTAGSLALRGLRPATDATVAARLRAAGAVILGK 165 Query: 122 LNMDEFAMGSS-----NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 N+ E+A G S ++ G +P++ +D + P SS G++ A A LC A I Sbjct: 166 TNLSEWAGGMSLTHHAGWSARGGQTRNPYK-LDRS----PSESSSGTAVATAASLCVAGI 220 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+T GSI PAS VG+KPT G R G+I PS D G I RTVRD+AILL + Sbjct: 221 GTETNGSIIDPASVNCVVGVKPTVGLVGRGGVIPGVPSQDSVGPIARTVRDAAILLGVLV 280 Query: 237 GYDECD-ATCVNLPV--PDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 G D+ D AT + DY R LD ++G +G+P+ Y S D+ ++ I L Sbjct: 281 GIDDRDPATEASRGRFHRDYTRFLDADGLRGARIGVPRAVYFGY-SHHADEIAERAIDTL 339 Query: 293 KDAGAKIVEIS----------LPHT--------QYALPAYYIISPAEASSNLARYDGVRY 334 ++AGA +V+ + LP + + AL AY +P + +LA + + Sbjct: 340 REAGATVVDPADIPTAEQLEDLPSSMVVQAYEVKRALNAYLAGAPGDHPRSLAEL--IAF 397 Query: 335 GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDF 393 +++ + ++ G E HR+ +H L RA I +++R Sbjct: 398 NRAHADRELRYVQQD------GLEAVHRLDFTEREYRQALATNHRLSRAEGIDAVLRR-- 449 Query: 394 TEAFEQGVDVILTPTT-PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 F +D ++ PTT P + L + G Y + +AG PAISVPA Sbjct: 450 ---FR--LDALVMPTTGPPAKIDLIR--------GDSYGGGASTPAALAGYPAISVPAGF 496 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P+GL +G + E L + E+ RP + Sbjct: 497 A-FGLPVGLTFMGTAWSEPNLLRLAYAYEQAGRVRRPPTY 535 >gi|297564893|ref|YP_003683865.1| amidase [Meiothermus silvanus DSM 9946] gi|296849342|gb|ADH62357.1| Amidase [Meiothermus silvanus DSM 9946] Length = 481 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 148/499 (29%), Positives = 228/499 (45%), Gaps = 50/499 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRII 64 ++ E + + + ISA+ELV+ Y+ I + ++N+ +E + + A +R Sbjct: 12 SIPELQSAMEAGGISALELVEYYLDRIRRYDQGGPRLNSVLETNPEARQIAQALDQERAR 71 Query: 65 NGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L GIP+ +KD T +HT A S + R ++ V +L GA++LGK N Sbjct: 72 KGPRGPLHGIPVMLKDNLDTADSLHTSAGSLAMQASRAPRDAFVVARLRAAGAILLGKAN 131 Query: 124 MDEFA--MGSSNETSYY---GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 M E+A M + + Y G V++P+ F PGGSS GS AV+ LCA ++GT Sbjct: 132 MTEWANFMTTGMKNGYSSRGGQVLNPY-----GPGFDPGGSSTGSGVAVSANLCAVAVGT 186 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI PA+ VGIKPT G SR GII + S D AG + R+V D+AILL +AG Sbjct: 187 ETSGSILSPANNNSLVGIKPTLGLVSRSGIIPISASQDTAGPMARSVTDAAILLSCLAGP 246 Query: 239 DECDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D P P DY R L I+G+ VG+P+ + SP + + L G Sbjct: 247 DPADPATRRQPAPADYPRFLRADIRGLRVGVPRTVFYEKPSPAEVAVVEGALQALARLGV 306 Query: 298 KIVEIS-LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS---- 352 ++ + + +P Y + E +L RY R G + + E+ + Sbjct: 307 QLTDPADIPGAAQVFELGYTVLLYEFRRDLNRYF-RRLGPSSPIRSLRELIRYNEAHPET 365 Query: 353 -IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTP 410 + +GQ + ++ SR Y R R + + K AF Q G+D + Sbjct: 366 MLRYGQTL---LLAAEAAGGSRSEAYRYARRRDLE-VAKGGLDAAFTQFGLDAL------ 415 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 AFP S+G AG P+I++PA + P+G+ L+G + E Sbjct: 416 --AFP----AYWGASIGA-----------KAGYPSITLPAGYTPEGFPVGITLLGPAWSE 458 Query: 471 ETLFSVGQIIEKEAGYFRP 489 TL + +E+ RP Sbjct: 459 GTLLRLAYGLEQATRARRP 477 >gi|238499021|ref|XP_002380745.1| glutamyl-tRNA amidotransferase, A subunit, putative [Aspergillus flavus NRRL3357] gi|220692498|gb|EED48844.1| glutamyl-tRNA amidotransferase, A subunit, putative [Aspergillus flavus NRRL3357] Length = 535 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 145/252 (57%), Gaps = 32/252 (12%) Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 + +G+P EY + L P + W + +++L+ G I +SLP T+ AL AYY+++PAEAS Sbjct: 283 LRIGVPTEYNILELHPAVRHAWSRTLAYLQRQGHSIHAVSLPTTKLALSAYYVLAPAEAS 342 Query: 324 SNLARYDGVRYGLRV-----EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 SNLA+YDGVRYG R +G+ +Y +TR GFG EVK RI++G + LS+ D++ Sbjct: 343 SNLAKYDGVRYGTRCGVLDRDGRPQGNLYASTRGHGFGSEVKRRIVLGAFSLSAHAMDNY 402 Query: 379 YLRARKIRTLIKRDFTEAFEQ------------------GVDVILTPTTPTSA---FPLG 417 +++A+++R L++RDF F+ GVD+++ PT P+ L Sbjct: 403 FIQAQRVRRLVQRDFDYIFQMKQPLASPGTDSERVPEHTGVDILICPTAPSPPPGISDLI 462 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP------LGLQLIGQPFREE 471 + + + NDVFTV ++AGLPAISVP + +K G+Q++GQ ++ Sbjct: 463 DSDAGASPLDAYMNDVFTVPASLAGLPAISVPVTVSGEKQDSSEAGLAGIQIVGQYGDDQ 522 Query: 472 TLFSVGQIIEKE 483 + VG+++E + Sbjct: 523 LVLKVGELVEDQ 534 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 3/121 (2%) Query: 33 AIENSNSQMNAYIEVV--AQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 A + S++ +NA I + + + R +++D R G R ++G I IKD T+ + T Sbjct: 12 ANQKSHAALNALITALQPSGQWREQVKDADLRTERGIPRSKVDGRLIAIKDNICTRDLPT 71 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S L+ F + STV +L D GAV+ GK N+DEF MGS + S +GPV S W+ D Sbjct: 72 TCASGTLEKFVSPFNSTVVGQLQDAGAVVAGKTNLDEFGMGSHSVYSRFGPVRSFWQGRD 131 Query: 150 S 150 + Sbjct: 132 A 132 >gi|148655404|ref|YP_001275609.1| amidase [Roseiflexus sp. RS-1] gi|148567514|gb|ABQ89659.1| Amidase [Roseiflexus sp. RS-1] Length = 472 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 140/494 (28%), Positives = 226/494 (45%), Gaps = 39/494 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL F+ E R+R++ IS VE+++++++ IE N Q+NA + + ++A A A +D Sbjct: 5 AELCFLTAIELTQRIRARSISCVEVMEAHLRQIERVNPQVNAIVTLAPEQALAQARAADA 64 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + DA L G+P+ KD TKG+ T S I F P + + ++ + GA+++G Sbjct: 65 ALRRSDAVGPLHGLPVAHKDLVQTKGMRTTFGSPIYADFVPDVDDLIVTRIRNAGAILIG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF GS +G +P+ + GGSSGG++ A+A + + G+DT Sbjct: 125 KTNTPEFGAGSQTFNPVFGATRNPYDLSKTC-----GGSSGGAAVALACGMLPIADGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF VG +P+ GR + +L G + RTV D+A+LL A+AG Sbjct: 180 GGSLRNPASFCNVVGFRPSPGRVPSCSDRAAWQTLSVPGPMARTVADAALLLSAMAGPHP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 C + P + + LD+ G+ V + + P + +Q L+ G IV Sbjct: 240 CSPIALQKPGAHFRQPLDRDFHGVRVAWSRTASGLPIDPEVTAVLEQARPVLEAIGC-IV 298 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E + P A A+ + L D R L+ + IL E R++ Q Sbjct: 299 EETEPDFTGADEAFKVWRAWGYEQKLGELADTHRDRLK---ETILWEIEQGRALTGPQ-- 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 IG RA ++RT + F Q + + P FP+ + Sbjct: 354 -----IG--------------RAERLRTALYHRMRR-FMQTYEFLALPVVQVPPFPIEQP 393 Query: 420 ---ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E N M Y D +++ G PAISVPA +P+GLQL+G+ + + Sbjct: 394 YVTEINGVPM-DTYIDWMRSCYYISITGFPAISVPAGFTRDGLPVGLQLVGRHHNDFGVL 452 Query: 475 SVGQIIEKEAGYFR 488 + E+ G++R Sbjct: 453 QLAHAFEQATGHWR 466 >gi|307728745|ref|YP_003905969.1| Amidase [Burkholderia sp. CCGE1003] gi|307583280|gb|ADN56678.1| Amidase [Burkholderia sp. CCGE1003] Length = 490 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 140/468 (29%), Positives = 219/468 (46%), Gaps = 53/468 (11%) Query: 39 SQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG 98 + +N++I V KA AAA +DK ++G+ + L G+PIG+KD + TK + T + + G Sbjct: 54 ASLNSFITVDEDKALAAARAADKARLSGETKALPGLPIGVKDSYLTKDLPTSFGTAVARG 113 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 F P ++ + + D G ++LGK N+ E + G + +YG +P+ + T GG Sbjct: 114 FTPAADAKIVTSVKDAGCIVLGKNNLVEMSYGLTGLNGHYGQAKNPYNVLHIT-----GG 168 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SS G +A+VA L A++G DT GSIR PA+ G VG KPT GR S G+ + +LD Sbjct: 169 SSCGGAASVAARLVPAALGGDTVGSIRVPAALCGVVGFKPTPGRWSGSGVAPISNALDTT 228 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 G I R V D +L G P +R L + ++G + + ++Y LD Sbjct: 229 GPIARRVSDCELLDSIATG-----------SAPSAQR-LPKGLKGTRLAVARQYYLDGAD 276 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISL-----PHTQYALPAYYIISPAEASSNLAR----- 328 P ++K + + I LKDAGA +VE+ L P + A A + + R Sbjct: 277 PEVEKIFNETIYRLKDAGASVVEVDLGTDFGPMVEEANWALFFHDTQPDVTAFLRDQNVP 336 Query: 329 --YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR-IMIGTYVLSSRCYDSHYLRARKI 385 ++ + GL K + + G+ EV +R + R +D Sbjct: 337 ITFEEIYEGLEPHIKARWQRFVLATGAGYTGEVAYRDALARRRPEVRRRFD--------- 387 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMA 441 TE F + D I+ PTT +A P E+ G NDVF T + A Sbjct: 388 --------TEVFSR-ADAIVFPTTLCAA-PTIAEQWEYTVAGRTVNDVFLSRNTYPASFA 437 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 GLP IS+P L +P+GL+L + L ++ + +E+ G+ RP Sbjct: 438 GLPGISIPMGLTRSGLPIGLELDASSGSDRALLTLARRVEQIIGFVRP 485 >gi|146338603|ref|YP_001203651.1| amidase [Bradyrhizobium sp. ORS278] gi|146191409|emb|CAL75414.1| amidase [Bradyrhizobium sp. ORS278] Length = 501 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 132/422 (31%), Positives = 199/422 (47%), Gaps = 23/422 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + IKD G+ + IL+G+ P ++T+ +L D GA +LGK + + Sbjct: 88 LKGKRVAIKDNVCVAGVQMMNGATILEGYVPEMDATIVTRLLDAGADILGKAVCEYYCAS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS G V +P + GGSS GS+A V + + G D GGSIR PAS+ Sbjct: 148 GGSHTSANGVVENPV-----VPGYNAGGSSSGSTALVMADIVDMATGGDQGGSIRIPASY 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT+G GI + ++D AG ITRTV D+A++L+ +AG D D Sbjct: 203 CGAVGLKPTHGLVPYTGIFAVELTVDHAGPITRTVADNALMLEVMAGPDGLDPRQRGAAA 262 Query: 251 PDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y +AL Q G+ +GI P+ + +D ++ L+ GA I E+S+P Sbjct: 263 QPYTQALSQGAAGLRIGIVPEGFGTAGAESEVDDRVREAAGRLQAKGADIREVSVPLHAA 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYE--NTRSIGFGQEVKHRIM 364 + I A+ + R G YG ++G + +L+ + R+ +K I+ Sbjct: 323 GAAIWTPIFLEGATDLMMR--GNAYGTNMKGVFLESLLDAHARWRDRAGELSDTLKLGIL 380 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G Y +SSR +Y +A+ + L+ D+ A Q DV+L PTTP +A L Sbjct: 381 TGHY-MSSRNRGRYYGKAQNLNRLLTADYDRALGQ-ADVLLMPTTPMAATRL---PAAGA 435 Query: 425 SMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S I F + N A G PAISVP P+G LI + E TL+ Sbjct: 436 SREEIIGRAFEMVGNTAPTCLTGHPAISVPVGKTSDGRPIGAMLIARHLDEMTLYRAAAA 495 Query: 480 IE 481 +E Sbjct: 496 LE 497 >gi|119952614|ref|YP_950306.1| amidase [Arthrobacter aurescens TC1] gi|119951744|gb|ABM10653.1| amidase [Arthrobacter aurescens TC1] Length = 513 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 134/430 (31%), Positives = 208/430 (48%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S L+GF P ++TV +L GA ++GK ++ Sbjct: 87 LAGRTVVIKDNVSVAGVPMMNGSRTLEGFVPSEDATVVTRLLGAGATIVGKAVCEDLCFS 146 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +PW ++ SS GS A VA +IG D GGSIR PA+F Sbjct: 147 GGSHTSKPGPVRNPWNHAHASGG-----SSSGSGALVAAGEVDMAIGGDQGGSIRIPAAF 201 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KPT+G G S+D G ITRTV D+A++L IAG DE D + Sbjct: 202 CGVVGHKPTHGLVPYTGGFPIEQSIDHLGPITRTVTDAALMLSVIAGRDEKDPRQPDRID 261 Query: 251 P-DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P DY AL +S +G+ VG+ E + + P +D T + + L+ G + ++S+P Sbjct: 262 PVDYVAALGESAKGLRVGVVTEGFGRENSEPEVDDTVRSAVETLRSVGLQAADVSIPWHL 321 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK---DILEMYE---NTRSIGFGQEVKHR 362 Y + +++ S + DG YG+ +G ++E Y + F + VK Sbjct: 322 YGGALWDVLATEGGLSQM--IDGNAYGMNWKGHYDPQLIEYYGRKWRSDPSMFSETVKLV 379 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+ G + L+++ + HY AR + + + +A +Q DV++ PT T A L + Sbjct: 380 ILAGRHALATQ-HGRHYAMARNLAPRLAAAYDDALDQ-YDVLVMPTLTTRAPVLAAPD-- 435 Query: 423 SGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 G + ++ F T ++ G PA +VPA L +P+GL +IG+ F + T+ V Sbjct: 436 -GPVEETFSRAFEMLPQTSPFDITGHPACTVPAGLA-GGLPVGLMIIGKRFHDATVLRVA 493 Query: 478 QIIEKEAGYF 487 E G F Sbjct: 494 HAFENAVGGF 503 >gi|10955002|ref|NP_053422.1| indole acetimide hydrolase [Agrobacterium tumefaciens] gi|6498355|dbj|BAA87807.1| tiorf182 [Agrobacterium tumefaciens] Length = 467 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 144/492 (29%), Positives = 234/492 (47%), Gaps = 51/492 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV++ I + + +NA + R +A++ D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVETLIARCQAAKP-LNALLATDWDGLRRSAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S V ++L+ GA+ NM E Sbjct: 62 AGLGLCGIPLCFKANIATGIFPTSAATPALINHLPKIPSRVAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPWNP-----SLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT R R II +P+ D AGII + V D IL + I+G + Sbjct: 177 PAALCGVVGFRPTLARYPRDRIIPVSPTRDTAGIIAQCVADVIILDQVISGRSAKIS--- 233 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 234 --PMP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE--NTRSIGFGQEV 359 + +LP P L + G V D+++ + +I Q Sbjct: 283 LEELNSGASLPIALYEFPHALKKYLDDFVGT-----VSFSDVIKGIRSPDVANIVSAQID 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H+I Y L+ + + R R T R++ ++ +D IL PT P +A +G+E Sbjct: 338 GHQISNDEYELARQSF-----RPRLQATY--RNYFRLYQ--LDAILFPTAPLAAKAIGQE 388 Query: 420 EN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++GSM + + ++ V+ AGLP +S+PA L ++P+G+++ G + L Sbjct: 389 SSVIHNGSMINTFK-IYVRNVDPSSNAGLPGLSLPACLTPDRLPVGMEIDGLAGSDHRLL 447 Query: 475 SVGQIIEKEAGY 486 ++G +EK + Sbjct: 448 AIGAALEKAINF 459 >gi|331010446|gb|EGH90502.1| amidase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 556 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 130/431 (30%), Positives = 210/431 (48%), Gaps = 27/431 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 193 GASFTSATGAVKNPW---DLTHNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S+P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGEASVPWHR 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G DI+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFGTRRREHANALSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P A L Sbjct: 426 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLVLPTMPFVATTLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 539 Query: 477 GQIIEKEAGYF 487 Q E G F Sbjct: 540 AQAYETARGAF 550 >gi|193216443|ref|YP_001999685.1| amidase [Mycoplasma arthritidis 158L3-1] gi|193001766|gb|ACF06981.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma arthritidis 158L3-1] Length = 444 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 134/449 (29%), Positives = 214/449 (47%), Gaps = 31/449 (6%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 AY ++ A A A D + + L IKD +A T+ S L+ F+ Sbjct: 10 AYNDLKANDNNAVAHVFDIKEPPMSNKPLANCIFTIKDNYADVACPTRGSSKFLETFQSS 69 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 YE+TV + L ++GA+ + + N+DEF MG S E S YG + P ++ GGSS G Sbjct: 70 YEATVLKLLRESGALCVARTNLDEFGMGGSGEYSAYGVIKHPQNH-----QYMIGGSSSG 124 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 ++A + + A IG+DTG S+R+PAS G VG KP+YG SR G+ SFA SLD T Sbjct: 125 AAATFSDNISFA-IGSDTGDSVRKPASNIGKVGFKPSYGAISRYGLFSFATSLDTVAYFT 183 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR----LDYLS 278 V D+ L + D + +L D L ++ + + PK D L+ Sbjct: 184 HNVNDAIELSHVLFKQDLAN----DLTSKD----LSFKLEDVKLAKPKTVAYLDCFDKLA 235 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL--PAYYIISPAEASSNLARYDGVRYG- 335 P + K +Q + LK A ++++I + + Y +IS +EASSNLA G+ +G Sbjct: 236 PAVAKAYQGLLDQLKKANVQLIKIDVDEKMFNSIDVVYKVISFSEASSNLANLTGIAFGP 295 Query: 336 -LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 +EG D E RS G+ V+ R+++G+Y L ++++A+K+R ++ F+ Sbjct: 296 KFDIEG-DWEETVIAKRSQKLGKMVQSRLILGSYFLEEENQIKYFVKAKKMRQVLFDYFS 354 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC- 453 E + D + P SA +EN + Y D N+ G P++++ Sbjct: 355 EIHSES-DCFIYPAASDSAPKF--DEN----IKPNYMDFILTYGNLVGNPSMTMKLGTNK 407 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 E MP + + ++ LFS +EK Sbjct: 408 ENNMPFNIAIDCAVDQDLKLFSHALYLEK 436 >gi|114763534|ref|ZP_01442939.1| Amidase [Pelagibaca bermudensis HTCC2601] gi|114543814|gb|EAU46826.1| Amidase [Roseovarius sp. HTCC2601] Length = 482 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 139/484 (28%), Positives = 221/484 (45%), Gaps = 43/484 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ E+ + S + +E+ + + I+ ++ AYI V +A AE + K G Sbjct: 18 LSLMETSALIASGQATPLEVTQAVLSRIDEVEDKITAYITVTRDRALEQAETATKERAAG 77 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L GIP +KD T T A +L +TVT++L G + +GKL M Sbjct: 78 LDRGPLHGIPFALKDLCETDFAPTSAGLDLLRDNETGRNATVTERLEQAGCITMGKLGMT 137 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A N+ +PW K G SS GS A+VA LC + G+DTGGSIR Sbjct: 138 EGAYSGHNDKMSVPK--NPWNP-----KCWAGSSSSGSGASVAAGLCFGATGSDTGGSIR 190 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P+ G G+K T+GR SR G+ + A SLD G + R+ D A +L AIAG D D T Sbjct: 191 FPSGSCGITGMKGTWGRVSRHGVFALADSLDHVGPMARSAEDCAAILTAIAGADANDPTA 250 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + VPDY A + I+G+ +G+ + +D +P + + I+ + GA+IV IS P Sbjct: 251 LLAEVPDYLAACTEPIRGLRIGLDRATVIDAAAPETAQVLNEAIAVFESLGAEIVPISFP 310 Query: 306 HTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 A+ + ++ E A ++ R+ R G ++L+ + G ++ R++ Sbjct: 311 WPTEAVDQWTVLCAIEVALAHQGRFPEQRDGYAPHLTELLDYGLTLSAKDVGAAMQWRLV 370 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 Y+ RA GVD++L P T P+ + +N G Sbjct: 371 ----------YNGSVARAM---------------HGVDMVLFPIT---GAPMPELDNVYG 402 Query: 425 S----MGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + G D+ FT + G P++++P + P+G QL+G E TLF G Sbjct: 403 APTAGQGENLGDMLKFTAPADFTGFPSLTLPGGFDSRGAPIGFQLMGPALTEATLFKAGA 462 Query: 479 IIEK 482 ++ Sbjct: 463 AFQR 466 >gi|332530245|ref|ZP_08406191.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Hylemonella gracilis ATCC 19624] gi|332040231|gb|EGI76611.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Hylemonella gracilis ATCC 19624] Length = 469 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 145/500 (29%), Positives = 238/500 (47%), Gaps = 60/500 (12%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RII 64 F+++ +++ + + ++++ LV+ +Q IE +++++A+++V A +AR AA D R Sbjct: 10 FVSIEQAKAAMEAGELTSELLVEHQLQRIERFDAKLHAFVDVYADEAREAARAMDGLRRA 69 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 L G+ + +KD F G + S +TV Q+L GA+++GK + Sbjct: 70 GISLGPLHGVTVAVKDLFEIDGKPITSGSVAQPARISTTTATVVQRLRSAGAIVIGKTHT 129 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E+A G G +PW D PGGSS GS+ AVA L A+IGTDTGGS+ Sbjct: 130 VEYAFGGWGTNEVMG---TPWNPWDLRTHRIPGGSSSGSAVAVAAGLACAAIGTDTGGSV 186 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA G VG+K T+G SR G+I PS D G + RTVRD A+LL +AG D DA Sbjct: 187 RIPAGLCGLVGLKTTHGLISRHGLIELCPSHDTVGPLARTVRDCALLLDVMAGADPRDAV 246 Query: 245 CVNLPV----PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK---------TWQQGISW 291 PV PD + +P+ RL ++ PT ++ T+ + + Sbjct: 247 SQGAPVRQIAPDLK------------ALPRGARL-WVLPTAERAGVEAAVLATYDEALDV 293 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L+ G ++VE +LP S AE+ + + EG L Sbjct: 294 LRGMGMQLVERNLPQ-----------SCAESMRIAGQL------MSAEGYAQLGPLFERS 336 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + F ++ RI++G+ + + + D LR+R +RD A + G+D + PT Sbjct: 337 ELRFDPNIRRRILLGSGISAQQYQD--LLRSRD---RARRDMLNAMD-GIDACVFPTNAI 390 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 SA P+ + + + + F VN+ L A++VPA + + MP+ +Q IG+ + E Sbjct: 391 SAIPVAEVDELATPLSR-----FGRFVNLMNLCALAVPAGMSPEGMPISIQFIGRSWDEP 445 Query: 472 TLFSVGQIIEKEAGY--FRP 489 + +G E+ + RP Sbjct: 446 KVLRLGLGFEQATAWHGLRP 465 >gi|170742737|ref|YP_001771392.1| amidase [Methylobacterium sp. 4-46] gi|168197011|gb|ACA18958.1| Amidase [Methylobacterium sp. 4-46] Length = 473 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 137/460 (29%), Positives = 221/460 (48%), Gaps = 34/460 (7%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCF 82 V+ V++ + I+ +++A++EV A AR AAE +++ I +G A L G+P+ +KD Sbjct: 36 VDAVEALLARIDRLEPRLHAFVEVYAADARLAAEGAERAIRSGHAVGPLHGVPVALKDLI 95 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G + S R +TV +++ G ++LGK + EFA G + G + Sbjct: 96 DVEGRISTGGSMTRRVQRATASATVAKRMIAQGMILLGKTHTVEFAFGGWGTNQHMGTPL 155 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +PW D PGGSS GS AVA + +IGTDTGGS+R PASF G G+K T GR Sbjct: 156 NPW---DPARPRVPGGSSSGSGVAVASRMAPWAIGTDTGGSVRLPASFCGITGLKVTVGR 212 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 S G++ + +LD G + R+V D A+L + G D D + D L++ ++ Sbjct: 213 VSTAGVLPLSTTLDTPGPMARSVEDVALLYNVLQGPDPLDPNTRGVVPVDPLPGLERGVR 272 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 GM +G + +P + + + + + GA+IV+ LP + A A Sbjct: 273 GMRLGRMPAAEREGCAPEMLAAYDRALDLVDRLGAEIVDTRLPFR------FVDFVNAAA 326 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 N Y I E + + ++V+ RI+ G V S+R YLR Sbjct: 327 IVNAEAY--------FHNGAIAEDF----AAPLDEDVRARILSGASV-SAR----DYLRT 369 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 R+++ +KR F A G+D +LTPTT T+A PL + + FT N Sbjct: 370 RRLQQDMKRAFDRAM-AGLDALLTPTTETAAIPLDAVDQA------VVPSRFTRFGNFLE 422 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 L A+++P + +PL LQ+ + + E T +GQ ++ Sbjct: 423 LCALALPCGFTAEGLPLSLQIACRGYEEATALRIGQAYQQ 462 >gi|315427137|dbj|BAJ48752.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Candidatus Caldiarchaeum subterraneum] gi|315427156|dbj|BAJ48770.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Candidatus Caldiarchaeum subterraneum] Length = 443 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 139/456 (30%), Positives = 228/456 (50%), Gaps = 56/456 (12%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 + I N AYI V + E S +R R L GI G+KD F KG T A Sbjct: 33 RVIGEKNDVYRAYITVF---PKPVVERSFRR------RFLRGISFGVKDVFHIKGYPTTA 83 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S +L + V ++ + G + GK N+ EFA G SN +YG ++P+ T Sbjct: 84 GSRLLSNMVSSRTAAVVSRILEAGGAVNGKTNLHEFAFGVSNINPFYGACLNPF----DT 139 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + + G S G + A G +C +GTDT GS+R PA+F G VG KPT G+ S G+I Sbjct: 140 SRVSGGSSGGSAVAVALG-MCDIGLGTDTAGSVRVPAAFCGVVGFKPTSGQLSTDGVIPL 198 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-PDYERALDQSIQGMTVGIPK 270 + S+D GI++R V ++ ++ + V+ P+ PD + L + G+ +G+P+ Sbjct: 199 SWSMDHVGILSRNVWETILVYSVL----------VDKPLKPDAIKPL--PLDGLRIGVPR 246 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 Y LD L +++ +++G+ L+ GA + E+ + + + A +I+ AEA++ Sbjct: 247 NYFLDLLDRHVEEAFEKGLRTLEQRGAVLEEVVVENVEKAARCRSVIAFAEAAA------ 300 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 Y L++ + E +GQ+V+ RI+ G + + + YL A + R + Sbjct: 301 ---YHLQLSRGRLHE---------YGQDVRDRIVRGLAIPA-----AAYLNALRARKRLV 343 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYNDVF--TVAVNMAGLPAIS 447 +DF + FE+ VDV+ TPTT A + +E G + + T N+ G+PAIS Sbjct: 344 KDFGKLFEK-VDVLATPTTLIPAHRVDEENVEIDGQLISVREASLKNTEPFNLYGVPAIS 402 Query: 448 VPAALCEKKMPLGLQLIGQPFREE-TLFSVGQIIEK 482 +PAA + +P+G+QL+G P+ E+ L +EK Sbjct: 403 LPAAERARGLPVGIQLVG-PYGEDLKLLRTALAVEK 437 >gi|220924666|ref|YP_002499968.1| amidase [Methylobacterium nodulans ORS 2060] gi|219949273|gb|ACL59665.1| Amidase [Methylobacterium nodulans ORS 2060] Length = 468 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 141/460 (30%), Positives = 220/460 (47%), Gaps = 34/460 (7%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCF 82 V VD+++ I + ++A++EV AR AAE +D+ I +G A L G+P+ +KD Sbjct: 31 VAAVDAFLSRIARLDPALHAFVEVYGPDARLAAEGADRAIRSGHAVGPLHGVPVAVKDLI 90 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G T S + R +T+ ++L G ++LGK + EFA G G Sbjct: 91 DIEGRITTGGSMTMRNRRATATATIVRRLIAQGMILLGKTHTVEFAFGGWGTNQRMGTPR 150 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +PW D TPGGSS GS AVA L +IGTDTGGS+R PASF G G+K T GR Sbjct: 151 NPW---DPAHPRTPGGSSSGSGVAVASRLAPWAIGTDTGGSVRLPASFCGITGLKVTVGR 207 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 S G++ + +LD G + R+V D A+L I G D D + D L++ ++ Sbjct: 208 VSTHGVLPLSTTLDTPGPMARSVEDVALLFNVIQGPDPLDPITRGIAPVDPMPVLERGVR 267 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 G+ +G + + + + + + L AGA+IV+I LP I AEA Sbjct: 268 GLRLGRMPAAEREGCAADVLAAYDRALELLDRAGAEIVDIQLPFRFVDFVNAAAILQAEA 327 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 ++G I E + + ++V+ RI+ G V S+R YLR Sbjct: 328 YF----HNGA----------IAEDF----AAPLDEDVRARILSGAAV-SAR----DYLRT 364 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG 442 R+++ ++R F A G+D +LTPTT T+A L + + FT N Sbjct: 365 RRLQQDMRRAFDRAM-SGLDALLTPTTETAAIRLDAVDQA------VMPSRFTRFGNFLE 417 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 L A+++P + +PL LQ++ + E +GQ ++ Sbjct: 418 LCALALPNGFSAEGLPLSLQVVCRGGDEPMALRIGQAYQQ 457 >gi|330989348|gb|EGH87451.1| amidase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 552 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 130/431 (30%), Positives = 210/431 (48%), Gaps = 27/431 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 129 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 188 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 189 GASFTSATGAVKNPW---DLTHNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 243 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 244 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 303 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S+P H Sbjct: 304 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGEASVPWHR 363 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G DI+ + R + V+ Sbjct: 364 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFGTRRREHANALSSSVRA 421 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P A L Sbjct: 422 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLVLPTMPFVATTLTAADA 479 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 480 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 535 Query: 477 GQIIEKEAGYF 487 Q E G F Sbjct: 536 AQAYETARGAF 546 >gi|28869616|ref|NP_792235.1| amidase [Pseudomonas syringae pv. tomato str. DC3000] gi|28852858|gb|AAO55930.1| amidase [Pseudomonas syringae pv. tomato str. DC3000] Length = 511 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 129/445 (28%), Positives = 217/445 (48%), Gaps = 28/445 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK Sbjct: 79 HIVGAPNGPLAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGK 138 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++ ++ TS G V +PW + GGSS GS+ V+ +IG D G Sbjct: 139 SVCEDLCFSGASFTSASGAVKNPWDLARNA-----GGSSSGSAVLVSLQEVDMAIGGDQG 193 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++++G VG KPTY G ++D G + VRD A++L IAG D Sbjct: 194 GSIRMPSAWSGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGL 253 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKI 299 D+ N P LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + Sbjct: 254 DSRQKNPPAVSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLQSLGATV 313 Query: 300 VEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---S 352 E S+P H AL + +I+ A+ + + +G YG+ V+G +I+ + R + Sbjct: 314 GEASVPWHHGVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHA 371 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 V+ + G Y L++ + ++Y +AR + + R + EAF+ DV++ PT P Sbjct: 372 NTLSSSVRAVALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFV 429 Query: 413 AFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A PL EE ++ + N T ++ G PA S+PA L + +P+ + ++ Sbjct: 430 ATPLTAADAPIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPR 485 Query: 468 FREETLFSVGQIIEKEAGYF-RPHK 491 F++ V Q E+ G F RP + Sbjct: 486 FQDALALRVAQAYEQVRGVFPRPPR 510 >gi|302063611|ref|ZP_07255152.1| amidase [Pseudomonas syringae pv. tomato K40] gi|302131020|ref|ZP_07257010.1| amidase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 552 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 131/445 (29%), Positives = 218/445 (48%), Gaps = 28/445 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK Sbjct: 120 HIVGAPNGPLAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGK 179 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++ ++ TS G V +PW D T GGSS GS+ V+ +IG D G Sbjct: 180 SVCEDLCFSGASFTSASGAVKNPW---DLTRNA--GGSSSGSAVLVSLQEVDMAIGGDQG 234 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++++G VG KPTY G ++D G + VRD A++L IAG D Sbjct: 235 GSIRMPSAWSGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGL 294 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKI 299 D+ N P LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + Sbjct: 295 DSRQKNPPAVSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATV 354 Query: 300 VEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---S 352 E S+P H AL + +I+ A+ + + +G YG+ V+G +I+ + R + Sbjct: 355 GEASVPWHHGVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHA 412 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 V+ + G Y L++ + ++Y +AR + + R + EAF+ DV++ PT P Sbjct: 413 NTLSSSVRAVALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFV 470 Query: 413 AFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A PL EE ++ + N T ++ G PA S+PA L + +P+ + ++ Sbjct: 471 ATPLTAADAPIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPR 526 Query: 468 FREETLFSVGQIIEKEAGYF-RPHK 491 F++ V Q E+ G F RP + Sbjct: 527 FQDALALRVAQAYEQVRGVFPRPPR 551 >gi|213971242|ref|ZP_03399359.1| amidase [Pseudomonas syringae pv. tomato T1] gi|213923995|gb|EEB57573.1| amidase [Pseudomonas syringae pv. tomato T1] Length = 511 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 131/445 (29%), Positives = 218/445 (48%), Gaps = 28/445 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK Sbjct: 79 HIVGAPNGPLAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGK 138 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++ ++ TS G V +PW D T GGSS GS+ V+ +IG D G Sbjct: 139 SVCEDLCFSGASFTSASGAVKNPW---DLTRN--AGGSSSGSAVLVSLQEVDMAIGGDQG 193 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++++G VG KPTY G ++D G + VRD A++L IAG D Sbjct: 194 GSIRMPSAWSGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGL 253 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKI 299 D+ N P LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + Sbjct: 254 DSRQKNPPAVSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATV 313 Query: 300 VEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---S 352 E S+P H AL + +I+ A+ + + +G YG+ V+G +I+ + R + Sbjct: 314 GEASVPWHHGVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHA 371 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 V+ + G Y L++ + ++Y +AR + + R + EAF+ DV++ PT P Sbjct: 372 NTLSSSVRAVALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFV 429 Query: 413 AFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A PL EE ++ + N T ++ G PA S+PA L + +P+ + ++ Sbjct: 430 ATPLTAADAPIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPR 485 Query: 468 FREETLFSVGQIIEKEAGYF-RPHK 491 F++ V Q E+ G F RP + Sbjct: 486 FQDALALRVAQAYEQVRGVFPRPPR 510 >gi|71735830|ref|YP_275157.1| amidase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556383|gb|AAZ35594.1| amidase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 511 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 132/434 (30%), Positives = 211/434 (48%), Gaps = 28/434 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 88 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 148 GASFTSATGAVKNPW---DLTRN--AGGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 203 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S P H Sbjct: 263 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGEASAPWHR 322 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G DI+ + R + V+ Sbjct: 323 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFGARRREHANALSSSVRA 380 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P A L Sbjct: 381 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLVLPTMPFVATTLTAADA 438 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 439 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 494 Query: 477 GQIIEKEAGYF-RP 489 Q E G F RP Sbjct: 495 AQAYETARGAFPRP 508 >gi|301383908|ref|ZP_07232326.1| amidase [Pseudomonas syringae pv. tomato Max13] Length = 556 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 131/445 (29%), Positives = 218/445 (48%), Gaps = 28/445 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK Sbjct: 124 HIVGAPNGPLAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGK 183 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++ ++ TS G V +PW D T GGSS GS+ V+ +IG D G Sbjct: 184 SVCEDLCFSGASFTSASGAVKNPW---DLTRNA--GGSSSGSAVLVSLQEVDMAIGGDQG 238 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++++G VG KPTY G ++D G + VRD A++L IAG D Sbjct: 239 GSIRMPSAWSGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGL 298 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKI 299 D+ N P LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + Sbjct: 299 DSRQKNPPAVSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATV 358 Query: 300 VEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---S 352 E S+P H AL + +I+ A+ + + +G YG+ V+G +I+ + R + Sbjct: 359 GEASVPWHHGVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHA 416 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 V+ + G Y L++ + ++Y +AR + + R + EAF+ DV++ PT P Sbjct: 417 NTLSSSVRAVALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFV 474 Query: 413 AFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A PL EE ++ + N T ++ G PA S+PA L + +P+ + ++ Sbjct: 475 ATPLTAADAPIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPR 530 Query: 468 FREETLFSVGQIIEKEAGYF-RPHK 491 F++ V Q E+ G F RP + Sbjct: 531 FQDALALRVAQAYEQVRGVFPRPPR 555 >gi|331251179|ref|XP_003338190.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317180|gb|EFP93771.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 404 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 157/290 (54%), Gaps = 25/290 (8%) Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 +L G+ + IKD F T+G T S L F+P Y++ V +L +GA ++GK NMDEF+M Sbjct: 59 ELAGLTVAIKDIFCTRGSVTSCASAALREFKPPYDAHVVSQLRRHGARIVGKTNMDEFSM 118 Query: 130 GSSNETSYYGPVISPW-----RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 GS++ S +G V++P R + G S G ++A AG LC +IG+DTGGSI Sbjct: 119 GSASTFSSHGRVVNPHGFCPSRQTMLESRSAGGSSGGSAAAVTAG-LCDIAIGSDTGGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA G +G+KP+YG SR G++ ++ SLD GI+ R+ + G+D+ D T Sbjct: 178 RLPAGHCGLIGLKPSYGLISRFGMVQYSTSLDTVGILARSTDQIRKTFSCLNGHDQRDPT 237 Query: 245 CVNLPVPDYERALDQSIQG-----------MTVGIP--------KEYRLDYLSPTIDKTW 285 + L++ Q + VGIP +EY +S I + Sbjct: 238 SIPKKYRLNSNELNRLWQARFARESGDLSDIRVGIPIIEVCFWRQEYFNSDVSEDILSAF 297 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + +LK GA++V ISLP T L AYY+I+ AEASSNLARY G+ Y Sbjct: 298 RATVDFLKQRGAQLVSISLPSTSSCLGAYYVIASAEASSNLARYSGLHYA 347 >gi|331018982|gb|EGH99038.1| amidase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 556 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 129/445 (28%), Positives = 217/445 (48%), Gaps = 28/445 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK Sbjct: 124 HIVGAPNGPLAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGK 183 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++ ++ TS G V +PW + GGSS GS+ V+ +IG D G Sbjct: 184 SVCEDLCFSGASFTSASGAVKNPWDLARNA-----GGSSSGSAVLVSLQEVDMAIGGDQG 238 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++++G VG KPTY G ++D G + VRD A++L IAG D Sbjct: 239 GSIRMPSAWSGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGL 298 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKI 299 D+ N P LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + Sbjct: 299 DSRQKNPPAVSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATV 358 Query: 300 VEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---S 352 E S+P H AL + +I+ A+ + + +G YG+ V+G +I+ + R + Sbjct: 359 GEASVPWHHGVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHA 416 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 V+ + G Y L++ + ++Y +AR + + R + EAF+ DV++ PT P Sbjct: 417 NTLSSSVRAVALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFV 474 Query: 413 AFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A PL EE ++ + N T ++ G PA S+PA L + +P+ + ++ Sbjct: 475 ATPLTAADAPIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPR 530 Query: 468 FREETLFSVGQIIEKEAGYF-RPHK 491 F++ V Q E+ G F RP + Sbjct: 531 FQDALALRVAQAYEQVRGVFPRPPR 555 >gi|289650533|ref|ZP_06481876.1| amidase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868188|gb|EGH02897.1| amidase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 556 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 132/434 (30%), Positives = 211/434 (48%), Gaps = 28/434 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 193 GASFTSATGAVKNPW---DLTRNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGEASAPWHR 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G DI+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFGARRREHANALSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P A L Sbjct: 426 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLVLPTMPFVATTLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 539 Query: 477 GQIIEKEAGYF-RP 489 Q E G F RP Sbjct: 540 AQAYETARGAFPRP 553 >gi|126730767|ref|ZP_01746577.1| Glu-tRNA amidotransferase, subunit A (gatA-1) [Sagittula stellata E-37] gi|126708933|gb|EBA07989.1| Glu-tRNA amidotransferase, subunit A (gatA-1) [Sagittula stellata E-37] Length = 466 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 142/501 (28%), Positives = 224/501 (44%), Gaps = 45/501 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + ++ S +R+ ++SAVE+V + I ++Q NA+ + Q A AAEE D Sbjct: 1 MKTRDMLSASAIAASVRAGELSAVEVVRHSLGRIAEIDAQYNAFCLTLPQSALEAAEEID 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G+A L G+P+ +KD T GI T S + F P ++ + ++L + GA+++ Sbjct: 61 RKRRAGEALGPLAGVPVAVKDFTPTAGIRTTFGSRAFEDFVPTTDAVIVRRLLEAGAILV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EFA + +G +PW T GGSSGG++ AVA + G D Sbjct: 121 GKTTTPEFASSWFTRSELFGATRNPW-----VPSHTCGGSSGGAAVAVATGCVPLAEGCD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GS+R PASF G VG+KP+ GR + S + G + RTV D+A+ L+++AG D Sbjct: 176 MLGSVRGPASFCGIVGLKPSLGRIPFDALPSTFDDISHFGPLARTVEDAALFLRSVAGPD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D +P + + G+ + + + + P + + L + GA+I Sbjct: 236 PVDLFSY-IPSLNLPETIPARPDGLRIALSADLGYGVVHPEVRAAVKDTAKALSNTGARI 294 Query: 300 --VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-LEMYENTRSIGFG 356 V++ L L A A A Y +R + ++ L+M + R+ G Sbjct: 295 EAVDLGLDADDAELTAN-----ASMVWMAAHYGALRDTCPEKLSELTLKMIDIGRTFG-A 348 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 E+K RI +LRA+ R L Q DV+L PT A L Sbjct: 349 AEIK-RI--------------DFLRAKLWRKL------AGVFQSYDVLLCPTMAQPAPAL 387 Query: 417 GKEENNSGSM---GHIYNDVFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIGQPFREET 472 G ++ + G G I T N+ G PA+SVP +P+G Q++G P E Sbjct: 388 GGDDFDYGGRTADGRIATLDLTGMFNLVGACPAVSVPCGTTADGLPIGAQIVGPPHDEAL 447 Query: 473 LFSVGQIIEKEAGYFRPHKWW 493 + S IE+ RP W Sbjct: 448 VLSAAAAIER----VRPQPGW 464 >gi|330876833|gb|EGH10982.1| amidase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 556 Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 130/434 (29%), Positives = 215/434 (49%), Gaps = 28/434 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ V+ +IG D GGSIR P+++ Sbjct: 193 GASFTSASGAVKNPW---DLTRNA--GGSSSGSAVLVSLQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S+P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATVGEASVPWHH 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHANTLSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L++ + ++Y +AR + + R + EAF+ DV++ PT P A PL Sbjct: 426 VALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFVATPLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L + +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPRFQDALALRV 539 Query: 477 GQIIEKEAGYF-RP 489 Q E+ G F RP Sbjct: 540 AQAYEQVRGVFPRP 553 >gi|194364564|ref|YP_002027174.1| amidase [Stenotrophomonas maltophilia R551-3] gi|194347368|gb|ACF50491.1| Amidase [Stenotrophomonas maltophilia R551-3] Length = 540 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 156/504 (30%), Positives = 250/504 (49%), Gaps = 44/504 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V++ + R+ + ++ + L +Y+Q A++ + ++ A IE+ + AAE +R Sbjct: 50 VADLQARMTAGELDSTTLTQAYLQRIAALDRAGPRLRAVIELNPDALKEAAERDRERRDG 109 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIPI +KD + T A S L GFRP ++ + ++L + GAV+LGK N+ Sbjct: 110 RLRGPLHGIPIVLKDNINAAPMATTAGSLALQGFRPD-DAYLVRRLREAGAVVLGKTNLS 168 Query: 126 EFAMGSSNET-----SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E+A N++ + G +P+R S P GSS GS+ AVA L + +IGT+T Sbjct: 169 EWANFRGNDSVSGWSARGGQTRNPYRLSHS-----PCGSSSGSAVAVAANLASVAIGTET 223 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PA+ G VG+KPT G SR GII + S D AG +TR+V D+A +L AIAG D+ Sbjct: 224 DGSIVCPAAVNGVVGLKPTVGLVSRDGIIPISFSQDTAGPMTRSVADAAAVLTAIAGRDD 283 Query: 241 CDATCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKD 294 D +P V DY LD Q ++G +G+ + L Y + P I +Q + L+ Sbjct: 284 ADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLI----EQAATELRR 339 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDI-LEMYENTRS 352 AGA +V + LP+ A + E + L RY R LR + I + + Sbjct: 340 AGAVVVPVELPNQGVWAEAERSVLLYEFKAGLERYLSTHRAPLRSLAELIAFNQAHSKQE 399 Query: 353 IG-FGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEA--FEQGVDVILTPT 408 +G FGQE ++ ++ D Y+RAR R L + +A +D ++ PT Sbjct: 400 LGLFGQE-----LLVEADATAGLADPAYIRARTDARRLAGPEGIDAALAAHQLDALVAPT 454 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 T A+P+ + ++ + ++VA +AG P++SVP + +P+GL +G + Sbjct: 455 T-GVAWPIRSDGDD------FPGESYSVAA-VAGYPSLSVPMGQID-GLPVGLLFMGTAW 505 Query: 469 REETLFSVGQIIEKEAGYFRPHKW 492 E L + E+ RP + Sbjct: 506 SEPKLIEMAYAYEQRTRARRPPHF 529 >gi|24987671|pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin gi|24987672|pdb|1M21|B Chain B, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin gi|24987673|pdb|1M22|A Chain A, X-Ray Structure Of Native Peptide Amidase From Stenotrophomonas Maltophilia At 1.4 A gi|24987674|pdb|1M22|B Chain B, X-Ray Structure Of Native Peptide Amidase From Stenotrophomonas Maltophilia At 1.4 A Length = 503 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 155/502 (30%), Positives = 246/502 (49%), Gaps = 46/502 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V++ + R+ + ++ + L +Y+Q A++ + ++ A IE+ + AAE +R Sbjct: 13 VADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPDALKEAAERDRERRDG 72 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIP+ +KD + T A S L GFRP ++ + ++L D GAV+LGK N+ Sbjct: 73 RLRGPLHGIPLLLKDNINAAPMATSAGSLALQGFRPD-DAYLVRRLRDAGAVVLGKTNLS 131 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A N++ IS W + + +P GSS GS+ AVA L + +IGT+ Sbjct: 132 EWANFRGNDS------ISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTE 185 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ G VG+KPT G SR GII + S D AG + R+V D+A +L AIAG D Sbjct: 186 TDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAGRD 245 Query: 240 ECDATCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLK 293 + D +P V DY LD Q ++G +G+ + L Y + P I +Q + L+ Sbjct: 246 DADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLI----EQAATELR 301 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDI-LEMYENTR 351 AGA +V + LP+ A + E + L RY + R LR I + + Sbjct: 302 RAGAVVVPVELPNQGAWAEAERTLLLYEFKAGLERYFNTHRAPLRSLADLIAFNQAHSKQ 361 Query: 352 SIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARK-IRTLIKRDFTEA--FEQGVDVILTP 407 +G FGQE ++ ++ D Y+RAR R L + +A +D ++ P Sbjct: 362 ELGLFGQE-----LLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAHQLDALVAP 416 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 TT A+P+ E ++ G Y+ A +AG P+++VP + +P+GL +G Sbjct: 417 TTGV-AWPIRSEGDD--FPGESYS-----AAAVAGYPSLTVPMGQID-GLPVGLLFMGTA 467 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 + E L + E+ RP Sbjct: 468 WSEPKLIEMAYAYEQRTRARRP 489 >gi|330951901|gb|EGH52161.1| amidase [Pseudomonas syringae Cit 7] Length = 511 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 28/436 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 88 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVIGKSVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 148 GASFTSATGAVKNPW---DLTRN--AGGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD AI+L IAG D D+ N PV Sbjct: 203 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAIMLDVIAGADGLDSRQKNPPV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ E + + +S P +D + ++ L+ GA + + S P H Sbjct: 263 VSCVATLDQGVAGLKIGLLSEGFAIPGMSEPQVDALVRAAVAQLESLGATVGDASAPWHR 322 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 323 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHANALSSSVRA 380 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+Q DV++ PT P A L Sbjct: 381 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKQ-FDVLVMPTMPFVATTLTAADA 438 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L + +P+ + ++ F++ V Sbjct: 439 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPRFKDALALRV 494 Query: 477 GQIIEKEAGYF-RPHK 491 Q E G F RP + Sbjct: 495 AQAYETARGAFPRPPR 510 >gi|330974153|gb|EGH74219.1| amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 556 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 130/431 (30%), Positives = 210/431 (48%), Gaps = 27/431 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVIGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 193 GASFTSATGAVKNPW---DLTRNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD AI+L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAIMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + + S P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGDASAPWHR 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHADALSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+Q DV++ PT P A L Sbjct: 426 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKQ-FDVLVMPTMPFVATTLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 539 Query: 477 GQIIEKEAGYF 487 Q E G F Sbjct: 540 AQAYETARGAF 550 >gi|66819445|ref|XP_643382.1| amidase family protein [Dictyostelium discoideum AX4] gi|60471483|gb|EAL69440.1| amidase family protein [Dictyostelium discoideum AX4] Length = 637 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 147/487 (30%), Positives = 242/487 (49%), Gaps = 54/487 (11%) Query: 21 ISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPI 76 I+ E+ + +I+ +S+ Q + A+I+++ ++ A S +R +G L +G+PI Sbjct: 165 ITPNEIANFFIECKNHSDEQSPPLKAFIKILEDDIKSQAMASAERWKSGSPLSLIDGVPI 224 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +KD G HT + L+ P+ +S V + L GA+++GK NM E + + Sbjct: 225 SLKDEIDQIGYHTTCGTTFLEKVFPNVKTEDSGVAKMLRQQGAILVGKNNMHEIGISTLG 284 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +++G +P+ PGGSS GS+++V+ L SIG D GGSIR PAS G Sbjct: 285 YNTHFGFTRNPYNL-----NHYPGGSSSGSASSVSAGLNPLSIGCDGGGSIRVPASLCGV 339 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV------- 246 VG+KPT+ R S GI S+ G I +V D+AI IAG D D V Sbjct: 340 VGLKPTFARVSHGGIFDLCWSVGHVGPIGSSVIDTAIGYACIAGSDSADHQSVLAEQYGG 399 Query: 247 NLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 VP + E L Q ++G+ +G+ ++ D D T+ + I LK+ GA+I+EI + Sbjct: 400 KPTVPMFTEIPLIQPLKGLKIGVFYDWINDCNIEFKDSTY-KCIEILKEQGAEIIEIEIS 458 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + + I +E +S++ R+ L+ Y++ S+ G Sbjct: 459 NLLVTRLSQGAIILSEMNSSMKRFKNYSNELQ---------YDSRISLSIGN-------- 501 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-----E 420 +L + S YL+A K+RT FTE F +GVD+I+TPT +A + K E Sbjct: 502 ---ILPT----SDYLQANKVRTFCIEQFTEIF-KGVDLIVTPTNAIAAPEIEKSVLSMGE 553 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQI 479 +N GS+G + VF N+ G+P I+VP L +K +P+G Q++ + ++E+ L + Sbjct: 554 SNFGSVGELMKYVFI--GNITGIPGITVPVGLTKDKNLPIGFQIMAKWWQEDLLLYTSYV 611 Query: 480 IEKEAGY 486 +EK + Sbjct: 612 LEKNIDF 618 >gi|66045448|ref|YP_235289.1| amidase [Pseudomonas syringae pv. syringae B728a] gi|63256155|gb|AAY37251.1| Amidase [Pseudomonas syringae pv. syringae B728a] Length = 511 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 130/431 (30%), Positives = 210/431 (48%), Gaps = 27/431 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 88 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVIGKSVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 148 GASFTSATGAVKNPW---DLTRN--AGGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD AI+L IAG D D+ N P Sbjct: 203 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAIMLDVIAGADGLDSRQKNPPA 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + + S P H Sbjct: 263 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGDASAPWHR 322 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 323 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHADALSSSVRA 380 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+Q DV++ PT P A L Sbjct: 381 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKQ-FDVLVMPTMPFVATTLTAADA 438 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 439 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 494 Query: 477 GQIIEKEAGYF 487 Q E G F Sbjct: 495 AQAYETARGAF 505 >gi|331698405|ref|YP_004334644.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326953094|gb|AEA26791.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 477 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 135/420 (32%), Positives = 207/420 (49%), Gaps = 44/420 (10%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G AR LEG+P G+KD AT GI T S + F P ++ + +L D G V+L KL+ Sbjct: 75 GTARPLEGVPYGLKDIVATAGITTTGGSSLFSDFVPTEDAALAARLADAGGVLLAKLSTF 134 Query: 126 EFAMGSS-NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA G + N T +GP +PW +T + G + + V +IGTDTGGSI Sbjct: 135 EFACGGAVNRT--FGPTRNPWDPQRTTGGSSSGSGAALALGQVP-----LAIGTDTGGSI 187 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G GIK T+GR R G++ + ++D AG + R+V D A++L IAG D D T Sbjct: 188 RIPAAFCGLTGIKATHGRVPRHGVMGLSWTMDHAGPMARSVADCALMLDVIAGPDPRDPT 247 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + L + AL + + GM V P+ + + P + + ++ L G +IV++ L Sbjct: 248 TLPLEAEPFTAALGRDVTGMRVARPRGFLEGGMHPAVAAAHEAALAELAATGVEIVDVEL 307 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P A A + I AE +L ++E ++ R Sbjct: 308 PTFDLAAVASWWIIYAE---------------------MLSLHE-----AHADRIEDRDE 341 Query: 365 IGTYVLSSRCYDS--HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 +G +L + + S YLRA ++R +R+ +A G D ++TP TS PL + Sbjct: 342 MGASLLGAAPFVSAADYLRALRLRPRFQRELADAM-AGCDALVTPAM-TSLPPLIAPQMV 399 Query: 423 SGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 S H + +V N+ G PA+ +P+ L E MP+ LQL+G+P E +LF++G Sbjct: 400 SDLGDHEVPWLEAACRTSVPFNLTGSPAMVLPSGLVE-GMPVSLQLVGRPRDEASLFALG 458 >gi|19744118|emb|CAC93616.1| peptide amidase [Stenotrophomonas maltophilia] Length = 540 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 155/505 (30%), Positives = 247/505 (48%), Gaps = 46/505 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V++ + R+ + ++ + L +Y+Q A++ + ++ A IE+ + AAE +R Sbjct: 50 VADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPDALKEAAERDRERRDG 109 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIP+ +KD + T A S L GFRP ++ + ++L D GAV+LGK N+ Sbjct: 110 RLRGPLHGIPLLLKDNINAAPMATSAGSLALQGFRPD-DAYLVRRLRDAGAVVLGKTNLS 168 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A N++ IS W + + +P GSS GS+ AVA L + +IGT+ Sbjct: 169 EWANFRGNDS------ISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTE 222 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ G VG+KPT G SR GII + S D AG + R+V D+A +L AIAG D Sbjct: 223 TDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAGRD 282 Query: 240 ECDATCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLK 293 + D +P V DY LD Q ++G +G+ + L Y + P I +Q + L+ Sbjct: 283 DADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLI----EQAATELR 338 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDI-LEMYENTR 351 AGA +V + LP+ A + E + L RY + R LR I + + Sbjct: 339 RAGAVVVPVELPNQGAWAEAERTLLLYEFKAGLERYFNTHRAPLRSLADLIAFNQAHSKQ 398 Query: 352 SIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARK-IRTLIKRDFTEA--FEQGVDVILTP 407 +G FGQE ++ ++ D Y+RAR R L + +A +D ++ P Sbjct: 399 ELGLFGQE-----LLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAHQLDALVAP 453 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 TT A+P+ E ++ G Y+ A +AG P+++VP + +P+GL +G Sbjct: 454 TT-GVAWPIRSEGDD--FPGESYS-----AAAVAGYPSLTVPMGQID-GLPVGLLFMGTA 504 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 + E L + E+ RP + Sbjct: 505 WSEPKLIEMAYAYEQRTRARRPPHF 529 >gi|54023137|ref|YP_117379.1| putative amidase [Nocardia farcinica IFM 10152] gi|54014645|dbj|BAD56015.1| putative amidase [Nocardia farcinica IFM 10152] Length = 538 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 142/490 (28%), Positives = 237/490 (48%), Gaps = 55/490 (11%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E+ L+++ + V+L+D+ ++ + + NA+I + A AE++ +R+ GDA Sbjct: 45 EAASLLQARTLHPVDLLDACLRRSADYDGATNAWIRTYPELAHDQAEQAAQRLAAGDAPL 104 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI +KD +A G+ A S +LDG ++TV ++L ++GAV+LG + DEFA+ Sbjct: 105 LCGLPIAVKDLYAVAGLPLTASSRVLDGNIAAGDATVWRRLREHGAVLLGHTHTDEFAIM 164 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ V +PW++ D+ SSGGS+AA+A ++GTDTGGS R PAS Sbjct: 165 TATPQ-----VGNPWKTDDTAGG-----SSGGSAAALAARYAPLALGTDTGGSARLPASR 214 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVN 247 G IKPT+GRCS+ G+I + D + RT+ D+A+LL +AG D D T Sbjct: 215 CGVSAIKPTFGRCSKYGVIPVMWTRDHPAAMGRTLADAALLLSFMAGADANDPVTGTAPP 274 Query: 248 LPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 LP + ++ + G G+P D L + + + + + + D G ++ E+ + Sbjct: 275 LPAAGFPFTAPEAAKPLGGRVFGVPVAA--DRLPAELGRLFTEFLGVVTDLGGELREVRM 332 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT--RSIGFGQEVKHR 362 P A +G+ G VE L MY +G + + Sbjct: 333 P---------------------AEPEGLATGDAVE----LGMYHRQWIEQLGLFRPLSAA 367 Query: 363 IM-IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEE 420 ++ +G L D YL+ + R +R + F E G+D ++ P T P Sbjct: 368 VVEVGLASLGIPSTD--YLQYSRARATYQRAYNRLFDEDGIDALVLPGAATDGMP----R 421 Query: 421 NNSGSMGHIYNDVFTVA-VNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLFSVGQ 478 + + + + D V N +G PA+S+PA +P G+QL G+P+ E L +G Sbjct: 422 STAAAASILGADHVPVTWANYSGAPALSLPAGRSRVTGLPFGVQLGGRPWGEADLLPLGL 481 Query: 479 IIEKEAGYFR 488 IE A ++R Sbjct: 482 AIEAAAPHWR 491 >gi|190014646|ref|YP_001967410.1| Iah [Agrobacterium tumefaciens] gi|71849449|gb|AAZ50397.1| Iah [Agrobacterium tumefaciens] Length = 467 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 142/495 (28%), Positives = 235/495 (47%), Gaps = 50/495 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +R+R KD S +ELV++ I E + S +NA + R +A++ D+ +G+ Sbjct: 6 SLTQTLERIRRKDYSCLELVETLIARCEAAKS-LNALLATNWDGLRRSAKQIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT A + L P S V ++L+ GA+ NM E Sbjct: 62 AGVGLCGIPLCFKANIATGIFPASAATPALINHLPKIPSRVAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPW-----NPSLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P++ G VG +PT GR II +P+ D GII + V D IL + I+G T Sbjct: 177 PSALCGVVGFRPTLGRYPGDRIIPVSPTRDTPGIIAQCVADVVILDEIISG------TPA 230 Query: 247 NL-PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + P+P ++G+ +G+P Y D L + + I L + G VE ++P Sbjct: 231 RIPPIP---------LRGLRIGLPITYFYDDLDADVGLAAETTIRQLANKGVTFVEANIP 281 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 H + + AS +A Y+ + LR D ++ + I + ++ Sbjct: 282 HLEEL--------NSGASLPIALYE-FPHALRQYLDDFVKTISFSDVIKGIRSPDVANIV 332 Query: 366 GTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQG-VDVILTPTTPTSAFPLGKEEN-- 421 + + + Y AR R ++ + F +D IL PT P A P+G++ + Sbjct: 333 NAQIDGHQVSRAEYELARHSFRPRLQATYRNYFRLNRLDAILFPTAPLVARPIGQDSSVI 392 Query: 422 NSGSMGHIYNDVFTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 ++GSM D F + V + AGLP +S+P L ++P+G+++ G ++ L + Sbjct: 393 HNGSM----MDTFKIYVRNVDPSSNAGLPGLSIPVCLTPDRLPVGMEIDGLAGSDQRLLA 448 Query: 476 VGQIIEKEAGY-FRP 489 +G +E+ G+ +RP Sbjct: 449 IGGALEEAIGFRYRP 463 >gi|304373357|ref|YP_003856566.1| Glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyorhinis HUB-1] gi|304309548|gb|ADM22028.1| Glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyorhinis HUB-1] Length = 458 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 118/409 (28%), Positives = 204/409 (49%), Gaps = 17/409 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FA S L+ FRP Y +TV +KL + GA + N DE +G S Sbjct: 48 IKANFANIYDRVTGSSKSLENFRPSYNATVIEKLINEGANPVAITNCDELGLGGLGLFSA 107 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 GP+ +P +DS+ GGSS G++A + + A I +DTG S+R+PA+F G VG K Sbjct: 108 NGPIYNP---LDSSK--IVGGSSSGAAATINENISFA-IASDTGDSVRRPAAFVGKVGFK 161 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE--- 254 P+YG SR G+ S++ SLD +T + D+A + K I G DE D + ++ + Sbjct: 162 PSYGAVSRYGLFSYSTSLDTVAWLTNNINDAAQVAKVIYGKDENDLSSKDVEIQSLSLDF 221 Query: 255 RALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 +A Q + V + ++ Y++ K Q I ++ K +++ + P Sbjct: 222 QANKQDFKPKKVAVLNLFKFVKSYVTKAFHKVVHQLIK--ENVDVKFIDVDEELLRCIDP 279 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y II+ +EA+SNL+ +G+ + K +++E TRS F ++ R+++G+Y L+ Sbjct: 280 VYSIITYSEATSNLSAINGLTFANAQPNKTWEQIFEQTRS-QFDYHLQKRLILGSYYLAK 338 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + +++A+K R +IK+ + + Q D ++ P+ A + EN+S + + Sbjct: 339 DNQEKFFIKAKKARRVIKQYYDQILNQ-YDCVIFPSYIGVAPDVENIENSSSDKDNFLDY 397 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + T+A N+ G P+IS+P A +P L + + + + L E Sbjct: 398 ILTLA-NLVGNPSISIPLAKFN-NLPFSLSVESKLYDDANLLKYSLYFE 444 >gi|163759846|ref|ZP_02166930.1| Amidase [Hoeflea phototrophica DFL-43] gi|162282804|gb|EDQ33091.1| Amidase [Hoeflea phototrophica DFL-43] Length = 534 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 41/457 (8%) Query: 33 AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEGIPIGIKDCFATKGIHTQ 90 A+E ++++ NAY V+A +A A +++K A L G P KD F +G + Sbjct: 95 ALERASARDNAYHGVIALEADRAMADAEKLEAKPSAERGILAGAPYARKDLFKREGYRAE 154 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDS 150 + I G STV ++L G + +G+L M E AM + ++ +PW Sbjct: 155 NGALIFKGQIADNTSTVIERLDAAGGIDIGRLAMAELAMSPTGFNAHTKHPRNPWNPAHV 214 Query: 151 TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 T GGSS GS+ AVA ++GTDTGGSIR PA+ +G GIKPT R SR G+ Sbjct: 215 T-----GGSSSGSAVAVAAGYVRFALGTDTGGSIRHPAAMSGLTGIKPTANRVSRAGVWP 269 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 + SLD G + R+ RD ++L I+G D D + + V L + G T+ +PK Sbjct: 270 LSWSLDCVGPLARSARDCGLVLDLISGLDPRDTSAGS--VATARPPLTGDLSGKTIAVPK 327 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 Y + ++P + + I K AGA IVE + P +++ EAS+ LA + Sbjct: 328 GYYFETVTPAVKASLDAAIETFKSAGATIVETAGPAMTAVNTMAHLVLAVEASAQLAPH- 386 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLI 389 + SI G++V+ R+ G + Y HY A ++R + Sbjct: 387 ---------------FTDPDCSI--GRQVRDRLEPGMF------YSGIHYATALRVRATL 423 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV-----FTVAVNMAGLP 444 + + +G D+ P + EE G + + T +N GLP Sbjct: 424 RGKWIAEAMEGADIAFIPAIACEVPTI--EETTQGDPKLVSAAIAKLTHTTRGINYLGLP 481 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 A+ P K +P+ QL+G+P E +L + + Sbjct: 482 ALVAPCGEDAKGLPIAFQLVGRPDDEASLIEIADAFQ 518 >gi|187921072|ref|YP_001890104.1| amidase [Burkholderia phytofirmans PsJN] gi|187719510|gb|ACD20733.1| Amidase [Burkholderia phytofirmans PsJN] Length = 466 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 133/459 (28%), Positives = 211/459 (45%), Gaps = 35/459 (7%) Query: 37 SNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHIL 96 S S +NA+I V AA +DK + G A L G+PIGIKD + T+ + T + + Sbjct: 28 SLSSLNAFITVEDATVLDAARNADKARLAGRAVGLPGLPIGIKDSYMTRDLPTSFGTAVA 87 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 FRP ++ V + + + G ++ GK N+ E + G + +YG +P+ + T Sbjct: 88 ADFRPTTDARVVKAMREAGLLVFGKNNLVEMSYGLTGLNGHYGQAKNPYNPLHIT----- 142 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 GGSS G +A+VA L A++G DT GSIR P+S G VG KPT GR S G+ + +LD Sbjct: 143 GGSSCGGAASVAARLVPAALGGDTVGSIRVPSSLCGVVGFKPTPGRWSSKGVAPISGTLD 202 Query: 217 QAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY 276 G I R V D +L G RA+ ++G+ + I Y LD Sbjct: 203 TTGAIARRVADCELLDSIATGSHS-----------RINRAI-HGLKGIKLAIAPRYYLDG 250 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY--YIISPAEASSNLARYDGVRY 334 P I+K + + + LKDAGA +VE+ L +L A+ + + E ++ + Sbjct: 251 ADPEIEKLFNETVRKLKDAGAHVVEVDLGADFGSLVAHGNWSVFFHETQPDVTIF----- 305 Query: 335 GLRVEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 LR G + ++Y+ + + G + Y L +R ++R Sbjct: 306 -LRENGVPVTVEQIYDGLEPHIKASWTRSVLPTGPNYTTDASYKDALLNSRP---EVQRR 361 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMAGLPAISV 448 + D ++ PTT A PL E+ G + ND F T + AGLP IS+ Sbjct: 362 YGNLAFSKADAVIFPTTLCQA-PLITEQWQYPVAGKVVNDTFLSRNTYPASFAGLPGISL 420 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 P L +P+GL++ ++ L + + IE+ G+ Sbjct: 421 PMGLLNSGLPVGLEIDAGHGSDKELLQLARRIEEVIGFI 459 >gi|222102156|ref|YP_002546746.1| indole acetamide hydrolase [Agrobacterium radiobacter K84] gi|221728273|gb|ACM31282.1| indole acetamide hydrolase [Agrobacterium radiobacter K84] Length = 471 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 145/491 (29%), Positives = 229/491 (46%), Gaps = 53/491 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++E+ L +I++VELV S + ++ ++NA+ + ++ + A + D R + Sbjct: 9 LTLTEANALLEKGNITSVELVSSLLDR-ADALRELNAFAHLDREQILSTARDCDARRKDA 67 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 D L G+PI +KD A G+ +A + L F P ++TV KL GA+ GK M Sbjct: 68 DGPLPILHGLPISLKDNIACVGMPMRANTPALQNFEPAQDATVAAKLKAAGAIPFGKNTM 127 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E A G ++ ++ GPV +P+ D+T P GSSGG+ AAV G L A IG+DTGGS+ Sbjct: 128 HELAFGGTSNNTFGGPVRNPF---DTTR--VPAGSSGGTGAAVGGRLVPAGIGSDTGGSV 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF G G +PT GR S G++ + + D G + R V D ++ +A+ Sbjct: 183 RVPASFNGVFGYRPTTGRWSGHGVLPLSHTRDTLGPLARAVSDLDLIDRALH-------- 234 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + E A+ I+ + +G P + D L+ + + +S L AGA IVEI L Sbjct: 235 -------EREPAVMAEIRTLRLGKPSGFYWDNLAEDVRTVCEHALSRLAGAGATIVEIDL 287 Query: 305 -PHT----QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 P T + A P + + E + L ++ + L VE + + S V Sbjct: 288 VPLTNLVREIAFPIVFYEAVPELTGFLEKW---KTELTVE-----TLLSSVASPDVAA-V 338 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR----DFTEAFEQGVDVILTPTTPTSAFP 415 +M + S Y+ R I +I E +D I+ PT+P +A Sbjct: 339 AKILMDPAQAVPSSAYN------RAIEEMIPEIAAGHAKILAEHLLDGIVYPTSPITAPK 392 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +G +E + G TV NM LP IS+P + +P+GL L G + Sbjct: 393 IGDDETTDLN-GEQVPTFLTVIRNMDIGSLIALPTISLPVGVDRNGLPIGLALEGAHAGD 451 Query: 471 ETLFSVGQIIE 481 E LF+V +E Sbjct: 452 EKLFAVALSLE 462 >gi|162146028|ref|YP_001600486.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] gi|161784602|emb|CAP54139.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] Length = 472 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 142/489 (29%), Positives = 227/489 (46%), Gaps = 33/489 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDK 61 +L +++ ++ D + ++ +++ L+++ + ++ + ++NA I + + A RAA Sbjct: 5 DLADLSLVDAVDAVAMRETTSMALLEACLARLDAAEERINATIWLDREGAFRAAEAADKA 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L G+P+ KD + G S I F P +TV +++ GA G Sbjct: 65 VAAGAALGLLHGLPLAHKDMYYQAGRPCTCGSVIRKDFVPTVTATVVERMAAAGAYAYGG 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNM EFAM + ++YG +PW T + G + +S G ++G+DTG Sbjct: 125 LNMAEFAMNPTGHNAHYGDCHNPWNLPYITGGSSSGSGAAVASRCTYG-----ALGSDTG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G G+KPT R SR G++ + S D G +TRTVRD A ++K IAG D Sbjct: 180 GSIRLPAAACGVTGLKPTQTRVSRAGVMPLSFSADNVGPLTRTVRDCARMMKVIAGQDSR 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T PVPDYE ALD ++G+ VGIP Y LD + ++ ++ L GA ++ Sbjct: 240 DPTSSAEPVPDYEAALDGDLRGLRVGIPTTYFLDGADAPVVAAFEAAVAVLAGRGATVMR 299 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP ++ Y GV LRVE I + R + ++ Sbjct: 300 LPLPLMD----------------AVSVYAGVL--LRVEAAAIHAEWMRERPQDYSVQLSA 341 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+ G + + +Y+ A R I + F + VDV+ TPT T L + Sbjct: 342 RLFGGNAIPA-----PYYVEALSRRGPILKAFADEVFGQVDVLATPTIRTCLPTLAETNI 396 Query: 422 NSGSMGHIYN----DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + GS + T N GLPAISV P+GLQ+ G+PF E + +V Sbjct: 397 DQGSPASVQAFMAVSANTRPFNYLGLPAISVNCGFDPNGCPIGLQIAGRPFAEARVMTVA 456 Query: 478 QIIEKEAGY 486 +++ + Sbjct: 457 DAYQRDTDW 465 >gi|330958776|gb|EGH59036.1| amidase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 556 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 130/436 (29%), Positives = 214/436 (49%), Gaps = 28/436 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ V+ +IG D GGSIR P+++ Sbjct: 193 GASFTSASGAVKNPW---DLTRNA--GGSSSGSAVLVSLQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S+P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATVGEASVPWHH 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHANTLSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + + Y +AR + + R + EAF+ DV++ PT P A PL Sbjct: 426 VALTGHYSLKN-LHGASYAKARMLVPELTRQYDEAFKD-FDVLVMPTMPFVATPLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L + +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPRFQDALALRV 539 Query: 477 GQIIEKEAGYF-RPHK 491 Q E+ G F RP + Sbjct: 540 AQAYEQVRGVFPRPPR 555 >gi|209544406|ref|YP_002276635.1| amidase [Gluconacetobacter diazotrophicus PAl 5] gi|209532083|gb|ACI52020.1| Amidase [Gluconacetobacter diazotrophicus PAl 5] Length = 472 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 142/489 (29%), Positives = 227/489 (46%), Gaps = 33/489 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDK 61 +L +++ ++ D + ++ +++ L+++ + ++ + ++NA I + + A RAA Sbjct: 5 DLADLSLVDAVDAVAMRETTSMALLEACLARLDAAEERINATIWLDREGAFRAAEAADKA 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L G+P+ KD + G S I F P +TV +++ GA G Sbjct: 65 VAAGAALGLLHGLPLAHKDMYYQAGRPCTCGSVIRKDFVPTVTATVVERMAAAGAYAYGG 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNM EFAM + ++YG +PW T + G + +S G ++G+DTG Sbjct: 125 LNMAEFAMNPTGHNAHYGDCHNPWNLPYITGGSSSGSGAAVASRCTYG-----ALGSDTG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G G+KPT R SR G++ + S D G +TRTVRD A ++K IAG D Sbjct: 180 GSIRLPAAACGVTGLKPTQTRVSRAGVMPLSFSADNVGPLTRTVRDCARMMKVIAGQDSR 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T PVPDYE ALD ++G+ VGIP Y LD + ++ ++ L GA ++ Sbjct: 240 DPTSSAEPVPDYEAALDGDLRGLRVGIPTTYFLDGADAPVVAAFEAAVAVLAGRGATVMR 299 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP ++ Y GV LRVE I + R + ++ Sbjct: 300 LPLPLMD----------------AVSVYAGVL--LRVEAAAIHAEWMRERPQDYSVQLSA 341 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R+ G + + +Y+ A R I + F + VDV+ TPT T L + Sbjct: 342 RLFGGNAIPA-----PYYVEALSRRGPILKAFADEVFGQVDVLATPTIRTCLPTLAETNI 396 Query: 422 NSGS----MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + GS + T N GLPAISV P+GLQ+ G+PF E + +V Sbjct: 397 DQGSPASMQAFMAVSANTRPFNYLGLPAISVNCGFDPNGCPIGLQIAGRPFAEARVMTVA 456 Query: 478 QIIEKEAGY 486 +++ + Sbjct: 457 DAYQRDTDW 465 >gi|304395373|ref|ZP_07377256.1| amidohydrolase, AtzE family [Pantoea sp. aB] gi|304356667|gb|EFM21031.1| amidohydrolase, AtzE family [Pantoea sp. aB] Length = 465 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 226/479 (47%), Gaps = 51/479 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 ++ +ISAVE+ S +QA+E N +NA+ EV + A D + G+ L GI Sbjct: 15 IQQGEISAVEVAKSTLQAVEQHNPALNAWTEVTGPRMLKEASAIDAQRQRGETLPPLAGI 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 P +K+ F G T A + + RP ++ +KL GA++ G LNMD +A G + Sbjct: 75 PYAVKNLFDVAGHSTLAGASLFRD-RPAAQADAFAVEKLRHAGALLSGMLNMDAYAYGFT 133 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S+YG +P R + + GGS+ +A + F S+GTDT GSIR PAS G Sbjct: 134 TENSHYGATHNP-RDLSRVAGGSSGGSAAAVAAGLVHF----SLGTDTNGSIRVPASLCG 188 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPT+GR SR G F SLD G + R V D A++ + G D DA + P+ + Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPLARRVEDLALVYDLLQGADHADAFQADRPLAE 248 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L Q +G+ G+ + + D+ + ++ + A E+ +P + A Sbjct: 249 TLPGLSQGSEGLRCGVLG----GFFARWCDEDARAAVAAVAAALEAQEEVLMPEAELARS 304 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A +I++ AE ++ + +M E F + R++ GT + Sbjct: 305 AAFIMTAAEGGNHYL-------------PALRQMPEQ-----FEPNSRERLLAGTMM--- 343 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--------SG 424 + Y++A++ R ++ F++ DV++ P TP SA +G++ Sbjct: 344 --PGAWYVQAQRFRRHFQQQVLPLFDR-FDVLIAPATPCSAITIGQQTLTIQGESLPAKA 400 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SMG + T ++ GLP +VP A +P+GLQLI +PF EE + +E++ Sbjct: 401 SMG-----MLTQPISFLGLPVCTVPLA-TRSGLPIGLQLIARPFNEEAVLRAAWALEQQ 453 >gi|159028871|emb|CAO90676.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 439 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 153/482 (31%), Positives = 233/482 (48%), Gaps = 56/482 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 ++++ SA+E++ + IE N +N + +++ +A A A++ D+ I NG+ L G+ Sbjct: 8 IQNRQTSALEVISQTLAEIEAKNPHLNCFTDILQPRALAQAQKIDQAIANGEPVGVLAGV 67 Query: 75 PIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ F KGI T A S I D ++ Q L GAV++G NMDE+A G Sbjct: 68 PFAVKNLFDIKGIVTLAGSKINRDHPAARQDAIAIQTLEAAGAVLVGATNMDEYAYGFVT 127 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E ++Y +P GGSSGGS+AAVA L ++G+DT GS+R PA+ G Sbjct: 128 ENAHYRATPNP-----RDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 182 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPT+GR SR G+ F SLD G + V D A + A NL P Sbjct: 183 VGLKPTFGRVSRQGLFLFVSSLDHPGFFSDNVADMAAIWSLFAKN--------NLKAP-- 232 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++G+ + + +Y P + + ++ + + +I++P T A A Sbjct: 233 ----LSGLEGVKIALADDYFQQGAEPEV----FEAVTAIAERLGVTKKITIPETARARAA 284 Query: 314 YYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 YIIS AE A+ +L R TR F + R + G + S Sbjct: 285 AYIISAAEGANWHLPRL-------------------QTRLEDFDPATRDRFLAGALIPS- 324 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-NSGSMGHIYN 431 S YL+A++ R + E F + VD+ILTPT P A PLG E+ G I Sbjct: 325 ----SWYLQAQRFRRWYRDRLREIFAE-VDIILTPTIPCIAPPLGVEKMIIDGQELLIRP 379 Query: 432 DV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 ++ FT + GLPA+S+P ++PLGLQ+I P RE+ + V +++E E P Sbjct: 380 NLGRFTQPFSFIGLPALSLPIKR-PSQLPLGLQIIAAPDREDLILRVARVLE-EMLIDIP 437 Query: 490 HK 491 HK Sbjct: 438 HK 439 >gi|66351660|emb|CAI96183.1| putative enantioselective amidase [Agrobacterium tumefaciens] Length = 504 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 121/422 (28%), Positives = 211/422 (50%), Gaps = 24/422 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I +KD + G+ + L+GF P Y++TV ++ D GA ++GK + F + Sbjct: 88 LAGRTIVLKDNISLAGVPMMNGASTLEGFIPGYDATVVTRMLDAGATIMGKATCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA-----ASIGTDTGGSIR 185 + TS GPV +P R G + G S++ + L A +IG D GGSIR Sbjct: 148 GGSHTSDPGPVHNPRRK----------GRAAGGSSSGSATLVALGEVDMAIGGDQGGSIR 197 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++F GT G+KPT+G GI+ ++D AG IT V+D+A+LL+ +AG D D Sbjct: 198 IPSAFCGTYGMKPTHGLVPYTGIMPIEATIDHAGPITANVKDNAVLLEVLAGADGLDPRQ 257 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L V DY L++ I GM + + KE + L + + Q+ + L+ GA + EIS+ Sbjct: 258 YALKVEDYASVLNRGIAGMKIAMVKEGFGLANMDARVADKVQEAAATLQSLGATVEEISI 317 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYE--NTRSIGFGQEVKH 361 P + I ++ + +G+ + + + +L+ + R+ +K Sbjct: 318 PSHAIGPAIWQPIGCEGLTAQMMHGNGMGFNWKGLYDVGLLDAHSAWRERADDLAATLKL 377 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + +G Y L +Y +A+ + ++K D+ + + D++L PT P A PL + + Sbjct: 378 CMFVGQYGL-DHYRGRYYAKAQNLARMLKADYDASLSE-FDLLLMPTVPVVAQPLPEADA 435 Query: 422 N-SGSMGHIYNDVFTVA-VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + S +G + + A +++ G PA+S+P L + ++P+GL L+G+ F E T++ Sbjct: 436 SLSDYIGRAFEMIANTAPLDITGHPAMSLPCGLVD-ELPVGLMLVGKHFGESTIYQAAAA 494 Query: 480 IE 481 E Sbjct: 495 FE 496 >gi|158424256|ref|YP_001525548.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331145|dbj|BAF88630.1| amidase [Azorhizobium caulinodans ORS 571] Length = 479 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 147/489 (30%), Positives = 240/489 (49%), Gaps = 45/489 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+F++++E+ + S +S V LV++++ IE ++++ +YI + +A AAA+ ++ Sbjct: 15 TPLHFLSITEASRLIGSGRLSPVTLVEAFLARIEAIDARLKSYITITRARALAAAKIAEA 74 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G + L GIP +KD + G+ T S ++ ST +L GA++LG Sbjct: 75 EIAAGRWKGPLHGIPFAVKDNYHVAGLPTTGGSRLMLHHVADATSTAVARLEAAGAILLG 134 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KLN E+ G+ N Y+ R+ FT GGSS G+ AAVA ++G+DT Sbjct: 135 KLNTWEY--GTGNGGVYHDLPFEVARNPWDLACFT-GGSSTGAGAAVAAGTAMFALGSDT 191 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G G K T+GR SR + +LD G +T TV D+AI+++AI+G+D Sbjct: 192 GGSIRLPAAACGLQGFKATFGRVSRAHCLPNCWTLDHTGPLTWTVEDNAIVMQAISGFDP 251 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD--YLSPTIDKTWQQGISWLKDAGAK 298 D + ++PVPDY + L ++G+ +G ++ + L Q+ L+ GA Sbjct: 252 GDPSAADVPVPDYRKNLHAGVKGLVIGFVRDLGPEGAALDAANAAALQEAARVLEAQGAI 311 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR------VEGKDILEMYENTRS 352 I E++LP + LA+Y V + + +D LE RS Sbjct: 312 IREVTLP------------------APLAQYRAVTKVINWSESYSIHEQDFLE-----RS 348 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GQ ++ ++M G V R D YL A ++R + D T+A + D +L Sbjct: 349 ALMGQALREKMMSGFTV---RAAD--YLAATRLRRSLV-DTTDALVRSCDALLI----AG 398 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 AF + + ++ D T N+ G PA+S+ +PL Q++G+ F EET Sbjct: 399 AFHVAPRFDAPDTITPFTADTATTVFNVTGHPALSICTGFDASGLPLNAQIVGRFFDEET 458 Query: 473 LFSVGQIIE 481 + V Q E Sbjct: 459 VLRVAQSYE 467 >gi|330723751|gb|AEC46121.1| amidase [Mycoplasma hyorhinis MCLD] Length = 458 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 117/409 (28%), Positives = 204/409 (49%), Gaps = 17/409 (4%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK FA S L+ FRP Y +TV +KL + GA + N DE +G S Sbjct: 48 IKANFANIYDRVTGSSKSLENFRPSYNATVIEKLINEGANPVAITNCDELGLGGLGLFSA 107 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 GP+ +P +DS+ GGSS G++A + + A I +DTG S+R+PA+F G VG K Sbjct: 108 NGPIYNP---LDSSK--IVGGSSSGAAATINENISFA-IASDTGDSVRRPAAFVGKVGFK 161 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE--- 254 P+YG SR G+ S++ SLD +T + D+A + K I G DE D + ++ + Sbjct: 162 PSYGAVSRYGLFSYSTSLDTVAWLTNNINDAAQVAKVIYGKDENDLSSKDVEIQSLSLDF 221 Query: 255 RALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 +A Q + V + ++ Y++ K Q I ++ K +++ + P Sbjct: 222 QANKQDFKPKKVAVLNLFKFVKSYVTKAFHKVVHQLIK--ENVDVKFIDVDEELLRCIDP 279 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y II+ +EA+SNL+ +G+ + + +++E TRS F ++ R+++G+Y L+ Sbjct: 280 VYSIITYSEATSNLSAINGLTFANAQPNQTWEQIFEQTRS-QFDYHLQKRLILGSYYLAK 338 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + +++A+K R +IK+ + + Q D ++ P+ A + EN+S + + Sbjct: 339 DNQEKFFIKAKKARRVIKQYYNQILNQ-YDCVIFPSYIGVAPDVENIENSSSDKDNFLDY 397 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + T+A N+ G P+IS+P A +P L + + + + L E Sbjct: 398 ILTLA-NLVGNPSISIPLAKFN-NLPFSLSVESKLYDDANLLKYSLYFE 444 >gi|330963602|gb|EGH63862.1| amidase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 556 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 129/434 (29%), Positives = 214/434 (49%), Gaps = 28/434 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ V+ +IG D GGSIR P+++ Sbjct: 193 GASFTSASGAVKNPW---DLTRNA--GGSSSGSAVLVSLQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S+P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVKAAVAQLESLGATVGEASVPWHH 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGAKRREHANTLSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L++ + ++Y +AR + + R + E F+ DV++ PT P A PL Sbjct: 426 VALTGHYSLNN-LHGAYYAKARMLVPELTRQYDEVFKD-FDVLVMPTMPFVATPLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L + +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAD-GLPVAMMIVAPRFQDALALRV 539 Query: 477 GQIIEKEAGYF-RP 489 Q E+ G F RP Sbjct: 540 AQAYEQVRGVFPRP 553 >gi|113477617|ref|YP_723678.1| amidase [Trichodesmium erythraeum IMS101] gi|110168665|gb|ABG53205.1| Amidase [Trichodesmium erythraeum IMS101] Length = 462 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 141/473 (29%), Positives = 221/473 (46%), Gaps = 39/473 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +++ + +A L++ ++ I +N +N + + + A AA++ D+ I G + L GI Sbjct: 17 IKAGETTAEILINKCLEQIYENNRTLNCFTAITTESALNAAKQIDRDISQGKNPGLLAGI 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ + G+ T A + I P + +T KL GA+++G LNMDE+A G Sbjct: 77 PFAVKNLYDIAGLTTLAGAKINAENPPATQDATAVTKLKKAGAILVGALNMDEYAYGFVT 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YG +P + SSG S+AAVA L ++G+DT GSIR PAS G Sbjct: 137 ENSHYGATPNPHDLSRISGG-----SSGASAAAVAAGLVPITLGSDTNGSIRVPASLCGV 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G KPTYGR SR G+ FA SLD G R+VRD A + + G D D C Sbjct: 192 FGFKPTYGRLSRAGVFLFASSLDNVGPFARSVRDIATVYDILQGSDTRDPVCTKRSPESC 251 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L Q I+ + + I + P + +Q + + +++P A A Sbjct: 252 LPQLKQDIKDLRIAIADGHFAQGGEPEVFTAVEQ----VAEVLGVTQRVTIPEADRARAA 307 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 YII+ AE +NL + LR+ +D F + R + G + + Sbjct: 308 AYIITAAEG-ANLHLDN-----LRIRPQD------------FDPATRDRFLAGALIPA-- 347 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIY 430 Y++A++ R + E F VD+IL PTTP A LG E+ N + Sbjct: 348 ---DWYIQAQRFRRWYQSSVKEIFND-VDIILAPTTPCIAPLLGAEKMTINGEEVLVRPN 403 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++T ++ GLP +SVP +PLG+Q+I P+ E + V ++E E Sbjct: 404 LGLYTQPLSFIGLPVLSVPIRRI-NGLPLGVQIIAAPYNEALVLQVAAVLEFE 455 >gi|331695306|ref|YP_004331545.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326949995|gb|AEA23692.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 515 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 133/430 (30%), Positives = 213/430 (49%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD A G+ S ++GF P ++T+ +L GA + GK ++ Sbjct: 87 LAGRTVAIKDNTAVAGVPMMNGSKTVEGFVPRRDATIVTRLLAAGATIAGKAVCEDLCFS 146 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +PW D T GSS GS+A VA + + G D GGS+R PA++ Sbjct: 147 GGSHTSRTGPVRNPW---DETRSAG--GSSSGSAALVASGVVDLATGGDQGGSVRIPAAY 201 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TCVNLP 249 +G VG KPT+G G ++D G +TRTV D+A++L IAG D D L Sbjct: 202 SGIVGHKPTHGLVPYTGAFPIEQTIDHLGPMTRTVADAALVLDVIAGPDGLDPRQPAGLV 261 Query: 250 VPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY AL +S G+ VG+ E + P +D T + + L++AG ++S+P Sbjct: 262 TDDYSGALARSAAGLRVGVVSEGFGHANSDPGVDATVRAAVDILREAGLDAEDVSVPWHL 321 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN------TRSIGFGQEVKHR 362 + + +I+ A++ + +G YG+ +G+ E+ + R F + VK Sbjct: 322 HGARIWDVIATEGAAAQMVEANG--YGMNWQGEYDPELIAHYGRQWRARPDEFSETVKFV 379 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-----G 417 ++ G Y L+S + HY AR + ++R + EA ++ DV++ PT P +A + Sbjct: 380 LLAGGYGLASE-HGRHYAMARNLAVDLRRAYDEALQR-YDVLVMPTLPMTASTIPGPDAP 437 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +EE + ++ I N T ++ G PA SVPA L +P+G+ +IG+ F + T V Sbjct: 438 REEIITRALEMIGN---TCVTDVTGHPATSVPAGLS-GGLPVGMMIIGRMFEDATPLRVA 493 Query: 478 QIIEKEAGYF 487 E+ G F Sbjct: 494 HTFEQAVGGF 503 >gi|326487738|dbj|BAK05541.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 613 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 147/471 (31%), Positives = 220/471 (46%), Gaps = 39/471 (8%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKD 80 + E V + ++ N M I A R A+ S KR G L+GI IKD Sbjct: 154 AVAEHVIAGVEEWNNKKPPMPMLIYFDAHDLRKQADASTKRFEQGSPISVLDGIFFAIKD 213 Query: 81 CFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 +++ + D RP ++ + +L G + +GK NM E +G + YG Sbjct: 214 DIDCFPYPSKSATTFFDKIRPVEKDAVLVARLRKCGVIFIGKANMHELGIGITGNNPNYG 273 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 V +P S D++T GGSS G +A V+ LC+A+IGTD GGS+R P+S G VG+K T Sbjct: 274 TVRNP----HSIDRYT-GGSSSGPAALVSSGLCSAAIGTDAGGSVRIPSSLCGIVGLKTT 328 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYERA 256 YGR + G++ + + A +T +V DS ++ A+AG D + L VP+ Sbjct: 329 YGRTNMTGMLCDSGTAVVASPLTASVEDSMLVYSALAGCRPMDKLTLRPLPLCVPNLVSC 388 Query: 257 LDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAY 314 + I Q + VG E+ D I T + +S L G +I EI LP A+ Sbjct: 389 ENSDILQSVKVGKYTEWFHDVSDVEISNTCEDALSLLCSTFGCQIEEIILPELLEMRTAH 448 Query: 315 YIISPAEASSNL-ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +I +E S L A Y + G R EM +TR G+ L Sbjct: 449 LVIIGSEGFSQLNAHY---QQGRRT------EMTLDTR--------------GSLALFGS 485 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--FPLGKEENNSGSMGHIYN 431 + Y+ ++++R I EAF + VDVI TPTT +A P + S + Sbjct: 486 FTSADYVASQRLRRRIMYYHMEAFRK-VDVIATPTTGITAPRIPPSALKGESDYIVSAKL 544 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 F VA N+ G PAI+VP ++ +P+GLQLIG+P+ E +L V +E+ Sbjct: 545 MQFIVAGNLLGFPAITVPVGHDKQGLPIGLQLIGRPWGEASLLRVALAVEE 595 >gi|330971453|gb|EGH71519.1| Amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 477 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 140/476 (29%), Positives = 229/476 (48%), Gaps = 41/476 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++++V+++++ + E +NA + + + A AAA +D + G+ L G+P+ Sbjct: 22 ELTSVQVLEACLTRFERVAPLLNASLWIDQEAAYAAAYAADSALQRGERVGVLHGVPLAH 81 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD FA S + +++TV +L GA LNM EFA + +++ Sbjct: 82 KDMFAQANRKCSFGSKVYSDLTHSHDATVIARLAGAGAYAFAGLNMAEFAQNGTGHNAHF 141 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G + W S +F GGSS GS A+VA + S+G+DTGGS+R PAS G GIKP Sbjct: 142 GDGRNAWDS-----RFISGGSSSGSGASVAACITYGSLGSDTGGSVRLPASANGVTGIKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T+ R SR G++ + S D G + RT RD A +L IAG+D D + + V YE+ L+ Sbjct: 197 THSRVSRYGVMPLSFSTDTVGPLARTARDCARMLGVIAGFDPHDHSSARVAVDRYEQRLN 256 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 I G+ +G+P+ Y S + +++ + L+ GA +V + LP +++ Sbjct: 257 GDITGLRIGVPRNYFFKDASDCVISAFEKALDVLESRGAILVRLELPLMDAINTYGGLVT 316 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 EA+S L VE M + SI + R+ + + + ++ Sbjct: 317 RVEAAS-----------LHVE-----NMRKQAGSI--SRHTNSRLFVSLAIPA-----AY 353 Query: 379 YLRARKIRTLIKRDF-TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--- 434 Y+ A R + + F TE FEQ VDV+ TPT AF L ++ G D + Sbjct: 354 YVEAISRRGSVLKQFATEVFEQ-VDVLATPTI---AFNLPTRADSDIDAGGEGADYYPRR 409 Query: 435 ----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 T N GLP+IS P +P+G+Q+ G+PF E T+ +V +++ + Sbjct: 410 VSDNTRPFNYLGLPSISFPCGFDFNGLPIGIQIAGRPFAESTILNVADAFQRDTDW 465 >gi|330888390|gb|EGH21051.1| amidase [Pseudomonas syringae pv. mori str. 301020] Length = 556 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 129/431 (29%), Positives = 209/431 (48%), Gaps = 27/431 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 193 GASFTSATGAVKNPW---DLTRNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGEASAPWHR 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G +I+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPEIMSYFGARRREHANALSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P A L Sbjct: 426 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLVLPTMPFVATTLTAADA 483 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 EE ++ + N T ++ G PA S+PA L E +P+ + ++ F++ V Sbjct: 484 PIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVAMMIVAPRFKDALALRV 539 Query: 477 GQIIEKEAGYF 487 Q E G F Sbjct: 540 AQAYETARGAF 550 >gi|166365160|ref|YP_001657433.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis aeruginosa NIES-843] gi|166087533|dbj|BAG02241.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis aeruginosa NIES-843] Length = 438 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 149/476 (31%), Positives = 233/476 (48%), Gaps = 61/476 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 ++++ SA+E+++ + IE N +N + +++ +A A A++ D I NG+ L G+ Sbjct: 12 IQNRQTSALEVINRTLAEIEAKNRHLNCFTDILHPRALAQAQKIDLAIANGEPVGVLAGV 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPH----YESTVTQKLWDNGAVMLGKLNMDEFAMG 130 P +K+ F +GI T A S I R H ++ Q L GAV++G NMDE+A G Sbjct: 72 PFAVKNLFDIEGIVTLAGSKI---NRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYAYG 128 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 E ++YG +P D + GSSGGS+AAVA L ++G+DT GS+R PA+ Sbjct: 129 FVTENAHYGATANP---RDPSRVSG--GSSGGSAAAVAANLVPLALGSDTNGSVRVPAAC 183 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT+GR SR G+ F SLD G + V D A + A NL Sbjct: 184 CGVVGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWGLFAKN--------NLKA 235 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 P ++G+ + + +Y P + ++ + + + +I++P T A Sbjct: 236 P------LNGLEGVKIALADDYFQQGAEPEVIES----VIAIAERLGVTKKITIPETVRA 285 Query: 311 LPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A YII+ +E A+ +L R TR F + R + G + Sbjct: 286 RAAAYIITASEGANWHLPRL-------------------QTRLEDFDPATRDRFLAGALI 326 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-NSGSMGH 428 S S YL+A++ R + E F + VD+ILTPT P A PLG E+ G Sbjct: 327 PS-----SWYLQAQRFRRWYRDRLREIFSE-VDIILTPTIPCIAPPLGVEKMIIDGQELL 380 Query: 429 IYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 I ++ FT + GLPA+S+P ++PLGLQ+I P REE + V +++E+ Sbjct: 381 IRPNLGRFTQPFSFIGLPALSLPIKR-PSQLPLGLQIIAAPDREELILRVARVLEE 435 >gi|317047027|ref|YP_004114675.1| amidohydrolase, AtzE family [Pantoea sp. At-9b] gi|316948644|gb|ADU68119.1| amidohydrolase, AtzE family [Pantoea sp. At-9b] Length = 465 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 140/492 (28%), Positives = 232/492 (47%), Gaps = 51/492 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ +++S + L + +ISA + + + AIE N +NA+ EV Q+ A++ D + Sbjct: 2 KLSTLSISALQQALSNGEISARAIAEQTLTAIEQHNPALNAWTEVTGQRMLKEADQLDTQ 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVML 119 G+ L GIP +K+ F G T A + + RP ++ KL +GA++ Sbjct: 62 RQRGETLPPLAGIPYAVKNLFDVAGHSTLAGASLFSE-RPAARDDAWAVSKLRQSGALLS 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G LNMD +A G + E ++YGP +P R + + GGS+ +A + F S+G+D Sbjct: 121 GMLNMDAYAYGFTTENTHYGPTHNP-RDLSRVAGGSSGGSAAAVAAGLVHF----SLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PAS G G+KPT+GR SR G F SLD G R+V D +++ + G D Sbjct: 176 TNGSIRVPASLCGIYGLKPTFGRLSRSGSHPFVASLDHIGPFARSVEDLSLVYDTLQGAD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DA PV + L Q ++G+ G+ + S + + ++ A A Sbjct: 236 PSDAFQAAQPVTAASQTLTQGLEGLRCGVLG----GFFSTWCNDDARAALAIAAKALAAN 291 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E+++ + + A A +I++ AE G Y ++ EM E F Sbjct: 292 DEVTMANAEIARSAAFILTAAEG--------GNHYLPKLR-----EMPER-----FEPNS 333 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R++ G + S + Y++A++ R ++ FE DV++ P TP SA +G+E Sbjct: 334 RERLLAGAMLPS-----AWYVQAQRFRRHFQQQVLPLFEH-FDVLIAPATPCSATTIGQE 387 Query: 420 E--------NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 SMG + T ++ GLP +VP +P+GLQLI PF+E Sbjct: 388 TIHINGQDLPTRASMG-----MLTQPISFLGLPVCTVPLP-TTSGLPIGLQLIAAPFKEH 441 Query: 472 TLFSVGQIIEKE 483 ++++ Sbjct: 442 LALRAAWALQQQ 453 >gi|320449233|ref|YP_004201329.1| amidase/amidotransferase [Thermus scotoductus SA-01] gi|320149402|gb|ADW20780.1| amidase/amidotransferase [Thermus scotoductus SA-01] Length = 431 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 144/472 (30%), Positives = 237/472 (50%), Gaps = 56/472 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +R + ++ +E +A ++ N+ E ++A+ EE + I G L G Sbjct: 8 ERGETTPLALLEEALERARAFQDRNALAYLDEEGAKEEAKRLTEELRQGYIRGP---LHG 64 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ +KD F KG+ T+A + P E+ ++L + GA++ K NM E A+G + Sbjct: 65 IPLTVKDLFPVKGMPTRAGTRAPLPPLPE-EAQAVRRLREAGALIFAKTNMHEVALGITG 123 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E + GPV + ++D++ + GGSS GS+ AVA + AS+G+DTGGSIR PA+F G Sbjct: 124 ENPWTGPVRN---ALDASRQA--GGSSSGSAVAVALGIGLASLGSDTGGSIRIPAAFNGV 178 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP+YGR S G + + S D AG I +TVRD+ L + +AG ++P+ Sbjct: 179 VGFKPSYGRVSLEGALPLSRSTDHAGPIAKTVRDAHFLTEILAGE--------SIPL--- 227 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + Q T G+P ++ L + + +Q+ + L A++ E+SLP LP Sbjct: 228 -----EGPQNPTFGVPLDFLEGRLGVEVRRAFQRLLEELPSLRAEVREVSLP-----LPG 277 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y E + L RY+ R+ K + E E GF +V+ +M G + Sbjct: 278 VY-----EVYTRLVRYEAA----RIHEKALREHPE-----GFSPQVREALMAGLSL---- 319 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 + Y A R ++ +A +GVD +L P P A PLG EE S + + Sbjct: 320 -TEKDYRDAVAERETLRLQLVKAL-RGVDALLLPAQPLPAPPLGTEEVELESGRRSHREA 377 Query: 434 F---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE-TLFSVGQIIE 481 F T+ ++ G+P +++P A E +MP+GLQ++G P+ E+ + ++G +E Sbjct: 378 FITLTLPFSLLGVPTLTLPFARVE-EMPVGLQVVG-PYAEDGRVLAIGGWLE 427 >gi|289582492|ref|YP_003480958.1| amidase [Natrialba magadii ATCC 43099] gi|289532045|gb|ADD06396.1| Amidase [Natrialba magadii ATCC 43099] Length = 503 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 127/424 (29%), Positives = 211/424 (49%), Gaps = 24/424 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G +GIKD + G+ S ++ G+ P+ ++T+ +L + GA ++GK NMD+ AM Sbjct: 91 LDGWEVGIKDNVSVAGVEMTCGSQVVAGYVPNRDATIVTRLLEAGADIVGKTNMDDMAMT 150 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ S +GP+ +P + + GGSSGGS+ AVA A+IG+D GGS+R PA+F Sbjct: 151 STGH-SAFGPITNP-----HDEAYLAGGSSGGSAVAVARGEVDAAIGSDQGGSVRVPAAF 204 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KPTYG G I ++D G + V A +L IAG +E D + PV Sbjct: 205 CGIVGHKPTYGLVPYTGCIGIEHAIDHPGPMAADVETVARMLTVIAGSNERDLRS-HAPV 263 Query: 251 P--DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P YE ALD I +T+G+ +E + +D + + +T + I L+ AGA +S+P Sbjct: 264 PTEQYEDALDGDISDLTIGVLEEGFDIDGANEAVLETVRDSIDDLEAAGATTEAVSVPMH 323 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTR---SIGFGQEVKHRI 363 A + + + +E + +G+ +G + + +E + R S +K + Sbjct: 324 SDAKDIHDVCT-SEGLLDAMLGEGLGHGWKAWYNRSWIESFGKARRAQSNDLPARLKLLL 382 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEE 420 ++G Y +S + +Y +A + + + E VD++ PT P P + Sbjct: 383 LMGAYT-NSEYHSRYYAQAMNLVVELTEQYDSVLED-VDLLAMPTAVTKPPKHDPDRDQY 440 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + I+N N G P +SVPA + +P GL L+GQ F + T+ + ++ Sbjct: 441 DRLQETNLIHN---ATPFNRTGHPGVSVPAGPVD-GLPTGLMLVGQRFDDATVLNAASVL 496 Query: 481 EKEA 484 E E+ Sbjct: 497 ESES 500 >gi|116670313|ref|YP_831246.1| putative amidase [Arthrobacter sp. FB24] gi|116610422|gb|ABK03146.1| Amidase [Arthrobacter sp. FB24] Length = 471 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 141/468 (30%), Positives = 215/468 (45%), Gaps = 34/468 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+L + E R IS V+ + + AIE ++ +NA++ V A+ A A ES+ Sbjct: 1 MSDLTDLTAVELLAGYREGTISPVDATQAALDAIEAADKDVNAFVSVEAESALQEARESE 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 R G +G+P IKD F T+G T +++++ ++ +L + GAV+ Sbjct: 61 GRWRKGQPLGPGDGVPTSIKDIFYTRGWATLRGTNLINADAAWDQDAPCVARLRETGAVL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK EFA ++ +G +P T GGSSGGS+ AV + S+GT Sbjct: 121 IGKTTTPEFAWKGVTDSLRHGSTGNP-----RAAGLTSGGSSGGSATAVGLGMGPWSVGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PA+FTGTV IKPTYG F +L AG +TRTV D+A+LL I G+ Sbjct: 176 DGGGSVRIPAAFTGTVAIKPTYGLVPMFPASPFG-TLAHAGPMTRTVEDTALLLDVITGF 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + + P + L+ ++GM + P I++ + L DAGA Sbjct: 235 DSRDWSALPTPTRSFLDGLNDGVKGMRIAFSPTLGFGTNDPEIERLVGAAVVVLADAGAI 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I E+ P Q + A++++ A A+ L Y G D + + G + Sbjct: 295 IEEVD-PGIQDPVEAFHVLWFAGAAKVLEAY----------GPDAITKVDP----GLRRS 339 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ + S +L A +R + F + D++LTPT P AFP G Sbjct: 340 IEEQ---------GDLSASDFLDATAVRMDLGVKM-GLFHETYDLLLTPTLPIPAFPRGT 389 Query: 419 EENNS-GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + S +T NM PA+SVP +P GLQ+IG Sbjct: 390 DAPEGWHSPNWTSWTPYTYPFNMTQQPAVSVPCGFTRAGLPAGLQIIG 437 >gi|302774693|ref|XP_002970763.1| hypothetical protein SELMODRAFT_270878 [Selaginella moellendorffii] gi|300161474|gb|EFJ28089.1| hypothetical protein SELMODRAFT_270878 [Selaginella moellendorffii] Length = 606 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 227/478 (47%), Gaps = 43/478 (8%) Query: 17 RSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 +S + ++ + ++ A++ S M+ +I + AEES R G L+ Sbjct: 141 KSGRLMPTQVAERFLSAVDESIKGQPGMSIFIAYNPRDILRQAEESTSRYKQGKPLSVLD 200 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+PI +KD T + + R E + KL GA+++GK NM E G+ Sbjct: 201 GVPIAVKDELDCLPYDTTGGTKWMSKVRDVKEDAACVSKLRACGAMLVGKTNMHELGQGT 260 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + +YG +P+ ++ SSGGS+AAVA LC A++G D GGS+R PA+ Sbjct: 261 TGINPHYGATRNPYNKAKASGG-----SSGGSAAAVACGLCPAALGVDGGGSVRMPAALC 315 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 G VG+K T+GR S G++ ++ G++ TV D+ I+ A+ G+ D V++P Sbjct: 316 GIVGLKGTFGRISSHGVLPLNWTVGSVGVLAATVEDTLIMYAAVQGHLSSDRI-VSIPPQ 374 Query: 250 --VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +P R +++I G+ + E+ D D+ + K G K VE+++P Sbjct: 375 VTLPQLNRIENEAIGGLKLAKYTEWFDDSDPDVKDRCYAALSKLQKRYGCKTVEVTIPEL 434 Query: 308 QYALPAYYIISPAEASSNLA-RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + A+++ E S++ +Y+ V G+ G DI +GF Sbjct: 435 EEMRLAHFVTIGCECYSSIGIQYENV--GVTATGADI--------RVGFA---------- 474 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 L ++ YL A+++R E F+ DVI+TPTT +A + + G + Sbjct: 475 ---LYKSFTNTEYLSAQRMRYRQMYYHMEIFKNA-DVIVTPTTAATAPSISLDALECGEL 530 Query: 427 GHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++Y + +A N GLPAISVP + MP+G+QLIG+P+ E TL + +IE Sbjct: 531 NYVYGAKLMRYQIAGNFIGLPAISVPVGFDQAGMPIGIQLIGKPWSEATLLRLAYVIE 588 >gi|316935360|ref|YP_004110342.1| amidohydrolase 3 [Rhodopseudomonas palustris DX-1] gi|315603074|gb|ADU45609.1| amidohydrolase, AtzE family [Rhodopseudomonas palustris DX-1] Length = 485 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 138/461 (29%), Positives = 212/461 (45%), Gaps = 43/461 (9%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQAC 92 I +++ +NA+ ++VA++ARA A E D + GD+ L G+P +K+ F G+ T+A Sbjct: 55 IAKADATLNAFTDIVAERARARAGEIDAALARGDSVGPLAGVPFAVKNLFEVAGLATRAG 114 Query: 93 SHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S I P +++T+ +L GAV++G LNM E+A + E + GP +P T Sbjct: 115 SKINRDRAPSSHDATLITRLEAAGAVLIGALNMGEYAYDFTGENIHDGPSRNPHDPSRMT 174 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + G + + V ++G+DT GSIR P+S G G+KPTYGR R G F Sbjct: 175 GGSSGGSGAAVAGGEV-----PLALGSDTNGSIRVPSSLCGIFGLKPTYGRLPRTGTFPF 229 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S D G + R+V D A+ A+ G D+ D C L Q + G+ + Sbjct: 230 VASFDHLGPLARSVGDLALAYDAMQGPDDGDDACTERAPEPVSGLLTQGLDGLRIAKAGG 289 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE-ASSNLARYD 330 Y L P ++ + + A + LP A A Y+IS E AS +L R Sbjct: 290 YFETNLFPEA----EEAVGRVVKALGVTRSVELPEAARARAAAYVISTTEGASLHLDR-- 343 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 LR + D F V+ R++ G V + RA+K R + Sbjct: 344 -----LRQQPND------------FDPAVRDRLLAGAMVPAPLVD-----RAQKFRRWYR 381 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG---HIYNDVFTVAVNMAGLPAIS 447 E FEQ VDVI+ P TP A LG+ G + + T ++ GLP ++ Sbjct: 382 ARVLELFEQ-VDVIIAPATPCVAPKLGQVTFTLGGVELPVRANVGIHTQPISFIGLPVVA 440 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 P L + +P+G+Q+I P+RE+ V +E+ AG R Sbjct: 441 APIPL--EPLPIGVQIIAAPWREDIALRVAAALER-AGVVR 478 >gi|118592419|ref|ZP_01549811.1| indole acetimide hydrolase [Stappia aggregata IAM 12614] gi|118435077|gb|EAV41726.1| indole acetimide hydrolase [Stappia aggregata IAM 12614] Length = 472 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 138/471 (29%), Positives = 220/471 (46%), Gaps = 50/471 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ SE + D+ A E+ D+ I+ ++ S NA+ E+ A+ R A+E D G Sbjct: 6 LSCSELASLISQGDLLATEVCDALIERVQKY-SGANAFTELDAEAVRQEAQECDSLRATG 64 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L G+P+ KD G T A + + FRP ++ V ++L GAV GK NM Sbjct: 65 HTRGPLHGVPVSFKDNINVLGYRTTAGTPGMRDFRPASDAPVARRLRQAGAVAFGKNNMH 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A G++ + +GP +P+ GGSSGGS+ AVA + ASIGTDTGGS+R Sbjct: 125 ELAYGTTTNNALFGPARNPFDP-----NLVCGGSSGGSACAVAHRMVPASIGTDTGGSVR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G G +P+ GR GI+ + + D G I RT D +L + G+ E Sbjct: 180 IPAAFCGLWGYRPSSGRWPTAGIVPISQTRDTPGPIARTPADLNLLDSLVVGFSE----- 234 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA--KIVEIS 303 +P PD I+ + +GI K + D + K ++ + L+ GA K+V+ Sbjct: 235 --VPKPDM-------IRDLRIGIAK-FFWDTADADVVKICEEVLEQLQTMGAVVKVVD-- 282 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-----GFGQE 358 +L A +I S +SN+A Y+G RV ++ LE+Y RS + Sbjct: 283 ----DRSLVAPHIAS----TSNIAHYEG-----RVALEEFLEIYNVGRSFEAVARSVASD 329 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAF-EQGVDVILTPTTPTSAFPL 416 I++ + Y A ++ R ++ + F + +DV+ PT+ + Sbjct: 330 GVRSILMDQLSAETMVAAEIYAEAVRVHRPELQNSYRRIFRDNSIDVLAFPTSLIPPPHI 389 Query: 417 GKEEN---NSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQL 463 G +E N + + V + AGLP I++PA L ++P+GL Sbjct: 390 GDDETVILNGKDVPLFTASIHNTDVGSNAGLPGITLPAGLIAGRIPVGLSF 440 >gi|70997984|ref|XP_753724.1| amidase [Aspergillus fumigatus Af293] gi|66851360|gb|EAL91686.1| amidase, putative [Aspergillus fumigatus Af293] gi|159126542|gb|EDP51658.1| amidase, putative [Aspergillus fumigatus A1163] Length = 533 Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 136/436 (31%), Positives = 202/436 (46%), Gaps = 31/436 (7%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D L G + +KDC A G+ S ++ + P ++TV ++ D GA +LG Sbjct: 95 NADGGPLAGKTVSLKDCIAVAGVPQLLGSDVIPSWTPITDATVVTRILDAGADILGTSTC 154 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + F + + TS G V +P+ + ++ GGS+ G +A VAG L +IG D GGSI Sbjct: 155 ENFCHSTGSYTSAQGVVENPFAA-----GYSAGGSTSGGAALVAGGLVDITIGGDQGGSI 209 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS G VG+KPT+G GI S D AG + R V+D A+ L AI+GYD D Sbjct: 210 RVPASLCGCVGLKPTHGLVPFTGISSGDAVNDHAGPLARNVQDIAVCLDAISGYDGIDDR 269 Query: 245 CVNLPVP---DYERALDQS---IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 + P P + R L + + G + + KE + + P + + + K GA Sbjct: 270 SLGSPKPGSTTFSRTLQEEPTRLDGFRIALLKEGFDHAAVDPAVRECVRMAAQRFKALGA 329 Query: 298 KIVEISLP-HTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + E+SLP H Q PA + I A S NL + R GL + + + S Sbjct: 330 TVEEVSLPEHLQG--PAIWTIQQRIAGSMNLLGHAHGRRGLYLTEMERARLPWTNESYQR 387 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 ++I LSSR D + R L RD EA + DV++ PTTP A Sbjct: 388 AFPATKNVIINGLYLSSRFPDLYGKTMNIGRRL--RDLYEAILEQYDVVIMPTTPVVAPR 445 Query: 416 LGKE----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIG 465 GK E+ SMG N T ++ G PA+S+P + +P+G+Q++G Sbjct: 446 HGKRGLPLESLKPSMGLTIN---TAIFDVTGQPAMSIPVGFAPARDDANVQLPVGMQIVG 502 Query: 466 QPFREETLFSVGQIIE 481 ++E + VG E Sbjct: 503 GLWQESKVLRVGHAWE 518 >gi|222080283|ref|YP_002540147.1| indole acetamide hydrolase [Agrobacterium vitis S4] gi|1170451|sp|Q04557|HYIN1_AGRVS RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|149128|gb|AAA98148.1| indole acetamide hydrolase [Plasmid pTiS4] gi|221738928|gb|ACM39707.1| indole acetamide hydrolase [Agrobacterium vitis S4] Length = 462 Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 131/493 (26%), Positives = 230/493 (46%), Gaps = 54/493 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++S++ LR K S +LV+S + E S + +NA+ R A+ D+ G Sbjct: 6 SISQTLRALRRKQYSCRDLVESLVSRSE-SATHLNAFAATDWLHLRNEADRVDRNGSGGV 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ K AT T A + L +P + + ++L GA++ NM E Sbjct: 65 G--LMGIPLCFKANIATGIFPTSAGTQGLLRHKPAIPAKIVERLHSAGALIGASGNMHEL 122 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + G +N+ +GP +PW GGSSGG + +VA L IGTDTG S+R P Sbjct: 123 SFGITNDNKTFGPARNPW-----NQALISGGSSGGVAVSVAANLMLGGIGTDTGASVRLP 177 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G VG +PT+G GI+ +PS D G+I R+V D+ +L + I ++C Sbjct: 178 AALCGVVGFRPTFGNYPTDGIVPVSPSRDTPGLIVRSVEDAVLLDRII--RNKCPTQ--- 232 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + S++G+ +G+P+ + D L P + ++ I L VE +P+ Sbjct: 233 ----------NMSLKGLRLGLPRSHFFDNLEPHVAAASERAIRRLATNQMTFVEADIPNV 282 Query: 308 -----QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 + +LP P + L+ + G+ G E+ +N + V+ + Sbjct: 283 AELTRKVSLPVAIYEFPRALMAYLS-FHGI-------GNTFDELIQNIQDPQVYDLVQSQ 334 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEEN 421 + G ++S Y LR K R +K + + G+D +L P+ P +A P+G + Sbjct: 335 LSKG--LISESVY-RRALRCYKPR--LKATYENYYSSNGLDAVLFPSVPLTAKPVGLQT- 388 Query: 422 NSGSMGH--IYNDVFTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 ++ H + D F + V + GLP++SVP +L ++P+G+Q+ G ++ + Sbjct: 389 ---TLVHNGVETDTFGIFVRNLDPSSNIGLPSLSVPVSLTPDRLPVGIQIEGPFGSDDMV 445 Query: 474 FSVGQIIEKEAGY 486 ++G+ +E+ + Sbjct: 446 LAIGRAVEEMVKF 458 >gi|157369173|ref|YP_001477162.1| amidase [Serratia proteamaculans 568] gi|157320937|gb|ABV40034.1| Amidohydrolase AtzE type [Serratia proteamaculans 568] Length = 466 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 145/487 (29%), Positives = 228/487 (46%), Gaps = 39/487 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ ++ ++++E R L+ ISA E+ + I+ N +NAY V ++ A+ D Sbjct: 1 MNPISTLSIAEIRAALQQGAISAREVAQQTLDNIDAQNPSLNAYTHVTRERMLTEADNLD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVM 118 + G A L IP +K+ F G T A S D ++ V +L GA++ Sbjct: 61 RARAKGQALPSLAAIPYAVKNLFDVTGETTLAGASLFCDNPPAKQDAWVVNRLAAQGALL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P D+T GGSSGGS+AAVA L S+G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATRNP---HDTTR--IAGGSSGGSAAAVAAGLVTFSLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR P+S G G+KPT+GR SR G F SLD G R VRD A + + G Sbjct: 176 DTNGSIRVPSSLCGIFGLKPTFGRLSRSGSQPFVASLDHVGPFARRVRDLAAVYDVMQGT 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D P+ E L + QG+ + Y + + QQ + A Sbjct: 236 DIEDRFQAEKPITQTESLLPRGQQGLRCAVLAGYFQQWCNEDAKAAVQQ----VAQALEA 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E+ LP + A A +I++ AE G +Y ++ + E +E Sbjct: 292 VAEVELPQAELARSAAFILTAAEG--------GNQYLPQLRSQP--ERFEPLS------- 334 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + + + YL+A++ RT ++ FE D+++ P TP +A +G+ Sbjct: 335 -RERLLAGAMLPA-----AWYLQAQRFRTHFQQQVLPLFEHW-DILIAPATPCAATVIGQ 387 Query: 419 EE---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E N + + T ++ GLP ++VP +P+GLQLI P+RE+ Sbjct: 388 ETLRINGTDLPIRAGMGMLTQPISFLGLPVVTVPLK-TAAGLPIGLQLIAPPWREDLALR 446 Query: 476 VGQIIEK 482 +E+ Sbjct: 447 AAYALEQ 453 >gi|2826753|gb|AAB99741.1| indole-3-acetamide hydrolase [Agrobacterium vitis] Length = 472 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 140/490 (28%), Positives = 230/490 (46%), Gaps = 47/490 (9%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E+ + LR K S EL ++ I E + S +NA + R A++ D+ G+ Sbjct: 6 SIKETLECLRLKKYSCSELAETIIARCEAAKS-LNALLATDWDYLRRNAKKVDEDGSAGE 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ K AT A + LD P + V + L D GA++ NM E Sbjct: 65 G--LAGIPLCSKANIATGIFPASAATPALDEHLPTTPAGVRKPLLDAGALIGASGNMHEL 122 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R P Sbjct: 123 SFGITSNNHATGAVRNPWNP-----SLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLP 177 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS G VG +PT GR I+ +P+ D AGII ++V D +L + I C + Sbjct: 178 ASLCGVVGFRPTIGRYPGDRIVPVSPTRDTAGIIAQSVPDVILLDQII-----CGKLTTH 232 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 PVP ++G+ +G+P Y D L + + I+ L G V+ +P Sbjct: 233 QPVP---------LEGLRIGLPTTYFYDDLDADVAFAAENLITLLASKGVTFVKAEIPDL 283 Query: 308 Q-YALPAYYIISPAEASSNLARY--DGVRYGLRVEGKDILEMYE--NTRSIGFGQEVKHR 362 Q + + I+ E L +Y D V+ V D+++ + +I Q H+ Sbjct: 284 QRLNIGVSFPIALYEFPFALQKYIDDFVK---DVSFSDVIKGIRSPDVANIANAQIDGHQ 340 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEEN 421 I +Y L+ + + R ++ + + F+ +D IL PT P +A P+G++ + Sbjct: 341 ISKASYELARQSF----------RPKLQAAYHDYFKLHQLDAILFPTAPLTAKPIGQDLS 390 Query: 422 --NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++G M + +F V+ AGLP +S+P +L K +P+G+++ G ++ L ++ Sbjct: 391 VMHNGVMADTFK-IFVRNVDPGSNAGLPGLSLPVSLTSKGLPIGMEIDGLAGMDDRLLAI 449 Query: 477 GQIIEKEAGY 486 G +E+ + Sbjct: 450 GAALEEAIAF 459 >gi|226357763|ref|YP_002787503.1| amidase [Deinococcus deserti VCD115] gi|226320006|gb|ACO47999.1| putative amidase [Deinococcus deserti VCD115] Length = 458 Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 152/487 (31%), Positives = 234/487 (48%), Gaps = 61/487 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SE+ F ++ + RS +S VE+ + + IE + +NA+I V A+ A A A +++ Sbjct: 4 SEILFASIPQVAACYRSGSLSPVEVTRACLARIEELDPALNAFISVTAELALAQAVQAET 63 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +G R L GIP+ +KD T G+ T S +L P ++ VT +L + GAV+LG Sbjct: 64 ELRSGTDRGPLHGIPVALKDLTDTAGVRTTCGSRLLADHVPGQDAVVTVRLREAGAVLLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EFA GS + YG +PW D T T GGSSGGS+AAVA LC A+ GTDT Sbjct: 124 KTNLLEFAYGSVHPD--YGQTNNPW---DVTR--TSGGSSGGSAAAVAAGLCFAAFGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA++ G G+KPTYG G+ + SLD G I R+ D+A++L A+ G Sbjct: 177 GGSIRIPAAYCGVTGLKPTYGLVPLDGVFPLSWSLDHGGPIARSSGDAALMLAALTG--- 233 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 A + +QG+ +G+ E+ R + + + + Q L+ AGA + Sbjct: 234 -----------GPHDAAPRDLQGVRLGVLAEHARGPDMQQGVVEVFDQACDALRRAGAVL 282 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYD-GVRYGLRVEGKDILEMYENTRSIGFGQE 358 VE+ +P L R D + + L E + + + + Sbjct: 283 VEVHIPQ-------------------LDRMDTAMMHVLLPEASAVHAAWLQQSPGAYAPD 323 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + + G V ++RA++ R + DF A VD IL+PT A+ Sbjct: 324 TRMHLEQGFAV-----SGVEHVRAQQYRRKLALDFLAALTD-VDAILSPTV---AWVAPH 374 Query: 419 EE----NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E+ +N GS T N+ G PA+S+ A E +P+GLQ+ +P + Sbjct: 375 EDPVVSDNEGST----EARRTAPANLTGFPALSLNAGFSE-GLPVGLQITTRPGADALAL 429 Query: 475 SVGQIIE 481 S+G +E Sbjct: 430 SLGMSLE 436 >gi|148589118|emb|CAN87007.1| indol-3-acetamid hydrolase [Agrobacterium vitis] gi|148589120|emb|CAN87008.1| indol-3-acetamid hydrolase [Agrobacterium vitis] Length = 467 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 140/492 (28%), Positives = 227/492 (46%), Gaps = 51/492 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV++ I E + + R A++ D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVETLIARCEAAKALNALLATDWG-GLRRRAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S + ++L+ GA+ NM E Sbjct: 62 AGVGLRGIPLCFKANIATGIFPTSAATPALINHLPKIPSRIAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPW-----NPSLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT GR R II +P+ D AGII + V D IL + I+G Sbjct: 177 PAALCGVVGFRPTLGRYPRDRIIPVSPTRDTAGIIAQCVADVVILDQVISGR-----PAR 231 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 232 ILPIP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE--NTRSIGFGQEV 359 + +LP P L + G V D+++ + +I Q Sbjct: 283 LEDLNSGASLPIALYEFPHALKQYLDDFVGT-----VSFSDVIKEIRSPDVANIVNAQID 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H+I Y L+ + + A R++ + +D IL PT P +A +G++ Sbjct: 338 GHQISNAEYELARQSFRPRLQAA-------YRNYFRLYR--LDAILFPTAPLAAKAIGQD 388 Query: 420 EN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++GSM + + ++ V+ AGLP +S+P L ++P+G+++ G + L Sbjct: 389 SSVIHNGSMVNTFK-IYVRNVDPSSNAGLPGLSLPVGLTPDRLPVGMEIDGLAGSDHRLL 447 Query: 475 SVGQIIEKEAGY 486 ++G +EK + Sbjct: 448 AIGAALEKAINF 459 >gi|163796800|ref|ZP_02190758.1| hypothetical protein BAL199_13698 [alpha proteobacterium BAL199] gi|159178054|gb|EDP62601.1| hypothetical protein BAL199_13698 [alpha proteobacterium BAL199] Length = 474 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 134/503 (26%), Positives = 228/503 (45%), Gaps = 59/503 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + R+ +R+K +S ELVDS I E N ++NA AR AA+ S+ R Sbjct: 11 DLCFTPATTLRELIRAKQLSPTELVDSVIARAEALNPRLNAICTPTFDAARDAAKRSEGR 70 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ R LEGIP+ IKD TKGI + A S+I + P ++ + +++ + GAV++GK Sbjct: 71 IAGGEHLRPLEGIPVTIKDLVMTKGIRSMAGSYIFEHRVPESDAPIVERVREAGAVVIGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E ++ G +PW+ + GGSS G++ A + G+D Sbjct: 131 TTTPELGWKGCGDSPLTGISHNPWKH-----GYNAGGSSTGAAICAAAGIGPLHQGSDGA 185 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-----SLDQAGIITRTVRDSAILLKAIA 236 GSIR PASF G GIKPT+GR I +AP S+ G +TRTV D+A++L +A Sbjct: 186 GSIRMPASFCGIYGIKPTFGR------IPYAPAPNNDSVSHIGPMTRTVGDAALMLDVLA 239 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G D+ D + P Y L+ I G+ V + + P + + ++ + + G Sbjct: 240 GPDDRDMASLTDEPPSYLDNLEADINGLRVAWSPDLGYLKVDPEVAEPVRKAVDAFTELG 299 Query: 297 AKIVEISL----PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 + E+ P + +++ SN A G+ +L+ +++ Sbjct: 300 CHVEEVDQLWDDPTEMHR--CFWV-------SNFAGNLGL----------LLDEWQDRMD 340 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G V+ + + + Y+RA++ R + F + D+++TPT + Sbjct: 341 PGLVACVRDGLSVSA---------AEYVRAKQQRLNFYAKVQDLFTR-YDLLVTPTMSVA 390 Query: 413 AFPLGK---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 AFP G+ E + I F+ N+ +PA + P P+G+Q++ R Sbjct: 391 AFPAGRLMPEHWEQHAWDWIRWAGFSYPFNLTWVPAATCPCGFTPDGRPVGIQIVAG--R 448 Query: 470 EETLFSVGQIIEKEAGYFRPHKW 492 + L ++++ + R W Sbjct: 449 SQDL----RVLQTSRAFERARPW 467 >gi|115893526|ref|XP_793576.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115940345|ref|XP_001180259.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 509 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 133/442 (30%), Positives = 213/442 (48%), Gaps = 37/442 (8%) Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K + G A L G I IKD A GI + L+G+ P +++TV ++ D G +L Sbjct: 77 KSTVKGAANGILSGKRIAIKDSIAVAGIPMMMGCYALEGYVPDFDATVVTRVLDEGGFIL 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK ++ +++ TS GPV +P + GGSS G + VA +IG D Sbjct: 137 GKATCEDLCYSANSHTSAKGPVSNPLNK-----QHCAGGSSSGCAVLVACNEVDMAIGGD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS+ G VG+KPT+G G ++D G I RTV D A LL+ IAGYD Sbjct: 192 QGGSIRVPASWCGVVGLKPTFGLVPYTGAACNEYTVDHVGPIARTVEDCAWLLEVIAGYD 251 Query: 240 ---ECDATCVNLPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQGIS-WLK 293 + C N+ VP+Y + L + + + + + KE + + P +DK + IS + Sbjct: 252 DGRDARQQC-NVEVPNYLKNLKNAPTKPLRIAVLKEGFGHEISDPEVDKLIRHTISRFAA 310 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 +GA + ++S+P + ++ I E L + GL G Y + Sbjct: 311 SSGATVEDVSIPLHKMSVALCVSILAVEGVDCL--FTSGCAGLNHTG-----YYPTSMMS 363 Query: 354 GFGQEV-----------KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 G G + K R+++G Y+ + C + Y +A+ +R L+ + + + E+ D Sbjct: 364 GVGARLKANMTKLAPCHKARLLLGNYLKKNYC--AVYGKAQNLRRLLTKGYDDVLEK-FD 420 Query: 403 VILTPTTPTSAFPLGKEEN-NSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLG 460 V+ PTTP +A L + + +GH + + + A N+ G P+IS+ A + E +P+G Sbjct: 421 VVAMPTTPFTAPKLPTQADWMKEILGHDTDMTWNLKAGNLTGHPSISINAGVVE-GLPVG 479 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 L L G+ F+E L EK Sbjct: 480 LLLTGKKFQELELLQAAYAFEK 501 >gi|126668681|ref|ZP_01739632.1| amidase [Marinobacter sp. ELB17] gi|126626859|gb|EAZ97505.1| amidase [Marinobacter sp. ELB17] Length = 503 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 124/428 (28%), Positives = 206/428 (48%), Gaps = 26/428 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD G+ S I++GF P ++TV +L D GA ++GK ++ F + Sbjct: 89 LAGRTVAVKDNILLAGVPMMVGSPIMEGFVPREDATVVTRLLDAGAHIIGKTSVPAFCID 148 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 T Y P P D + G SS GS+ V ++G D GGSIR PAS+ Sbjct: 149 GGGCTGY--PEPQPVNPHDP--ERLAGASSNGSAVVVTNGEVDMALGGDQGGSIRLPASW 204 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G GIK T+G GI +LD G + RT D A +L+ +AG D D N+ Sbjct: 205 SGCYGIKGTHGLVPYTGIFPIELTLDHVGPMARTAEDCARMLEVLAGPDGLDPRQCNVRT 264 Query: 251 PDYERALDQSIQGMTVGIPKEYR--LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y +L +++ G+ +GI +E D +D ++ + L+ AGA + E+S+P Sbjct: 265 AKYTESLSENLTGLRIGILREGFGIADVSESDVDAAVREAVGVLEKAGASVSEVSVPMHS 324 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK---DILEMY---ENTRSIGFGQEVKHR 362 L + I+ + + R D +G G +++ Y R F VK Sbjct: 325 DGLAIWSAIAFEGVTELMVRGDA--FGTNWRGHYSTQLMDFYGRARRARGHDFSDTVKAT 382 Query: 363 IMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--FPLGK- 418 ++ G Y+ S Y+ HY +A+ + + ++ A +Q D+++ PTT A +P K Sbjct: 383 VLTGHYM--SEQYNRHYYGKAQNVGRRLAGEYDRALQQ-CDLLVMPTTAMKAVRWPADKS 439 Query: 419 -EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E +G++G+++N T +++G PA+SVP L E +P+G+QL+G+ + E T+ Sbjct: 440 LESTLAGALGNLHN---TAPFDVSGHPAMSVPIGLSE-GLPVGMQLVGKRWDEATVLKAA 495 Query: 478 QIIEKEAG 485 + G Sbjct: 496 HAYQVAVG 503 >gi|254521207|ref|ZP_05133262.1| peptide amidase [Stenotrophomonas sp. SKA14] gi|219718798|gb|EED37323.1| peptide amidase [Stenotrophomonas sp. SKA14] Length = 540 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 159/507 (31%), Positives = 251/507 (49%), Gaps = 50/507 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKAR-AAAEESDKRII 64 V++ + R+ + ++ + L +Y+Q I + + ++ A IE+ + AAA + ++R Sbjct: 50 VADLQARMTAGELDSTTLTQAYLQRIATLDRTGPRLRAVIELNPDALKEAAARDRERR-- 107 Query: 65 NGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G R L GIP+ +KD + T A S L GFRP ++ + ++L D GAV+LGK N Sbjct: 108 DGRLRGPLHGIPLLLKDNINAAPMATSAGSLALQGFRPD-DAYLVRRLRDAGAVVLGKTN 166 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIG 177 + E+A N++ IS W + + +P GSS GS+ AVA L + +IG Sbjct: 167 LSEWANFRGNDS------ISGWSARGGQTRNPYRLSHSPCGSSSGSAVAVAANLASVAIG 220 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA+ G VG+KPT G SR GII + S D AG + R+V D+A +L AIAG Sbjct: 221 TETDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAG 280 Query: 238 YDECDATCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISW 291 D+ D +P V DY LD Q ++G +G+ + L Y + P ID Q + Sbjct: 281 RDDADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLID----QAATE 336 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDI-LEMYEN 349 L+ AGA +V + LP+ A ++ E + L RY R LR + I Sbjct: 337 LRRAGAVVVPVELPNQGAWAEAERLVLLYEFKAGLERYFSTHRAPLRSLAELIAFNQAHA 396 Query: 350 TRSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARK-IRTLIKRD--FTEAFEQGVDVIL 405 ++ +G FGQE ++ ++ D Y+RAR R L + Q +D ++ Sbjct: 397 SQELGLFGQE-----LLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAQQLDALV 451 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 PTT A+P+ E ++ G Y+ A +AG P++SVP + +P+GL +G Sbjct: 452 APTT-GVAWPIRSEGDD--FPGESYS-----AAAVAGYPSLSVPMGQID-GLPVGLLFMG 502 Query: 466 QPFREETLFSVGQIIEKEAGYFRPHKW 492 + E L + E+ RP + Sbjct: 503 TAWSEPKLIEMAYAYEQRTRARRPPHF 529 >gi|123930|sp|P25016|HYIN2_AGRVI RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|67987|pir||HJAGI indoleacetamide hydrolase (EC 3.5.1.-) TA - Agrobacterium tumefaciens plasmid pTiTm4 Length = 467 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 140/492 (28%), Positives = 227/492 (46%), Gaps = 51/492 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV++ I E + + R A++ D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVETLIARCEAAKALNALLATDWG-GLRRRAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S + ++L+ GA+ NM E Sbjct: 62 AGVGLRGIPLCFKANIATGIFPTTAATPALINHLPKIPSRIAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPW-----NPSLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT GR R II +P+ D AGII + V D IL + I+G Sbjct: 177 PAALCGVVGFRPTLGRYPRDRIIPVSPTRDTAGIIAQCVADVVILDQVISGR-----PAR 231 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 232 ILPIP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE--NTRSIGFGQEV 359 + +LP P L + G V D+++ + +I Q Sbjct: 283 LEDLNSGASLPIALYEFPHALKQYLDDFVGT-----VSFSDVIKEIRSPDVANIVNAQID 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H+I Y L+ + + A R++ + +D IL PT P +A +G++ Sbjct: 338 GHQISNAEYELARQSFRPRLQAA-------YRNYFRLYR--LDAILFPTAPLAAKAIGQD 388 Query: 420 EN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++GSM + + ++ V+ AGLP +S+P L ++P+G+++ G + L Sbjct: 389 SSVIHNGSMVNTFK-IYVRNVDPSSNAGLPGLSLPVGLTPDRLPVGMEIDGLAGSDHRLL 447 Query: 475 SVGQIIEKEAGY 486 ++G +EK + Sbjct: 448 AIGAALEKAINF 459 >gi|72129400|ref|XP_782487.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115964659|ref|XP_001180275.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 582 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 125/418 (29%), Positives = 201/418 (48%), Gaps = 24/418 (5%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + I D A G+ A H L+G+ P +++ V ++ D G +LGK + + T Sbjct: 173 VAINDNIAVAGVPMMAGCHALEGYVPDFDAIVVTRILDEGGTILGKSMCESLCFSGGSFT 232 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S GPV + + S GGS+ G + VA +IG D GSIR PAS+ G VG Sbjct: 233 SAKGPVCNAYNVAKSA-----GGSTSGGAVLVACNEVDMAIGGDQRGSIRVPASWNGIVG 287 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP----VP 251 +KP+YG G +S PSLD G + RTV D A++L+AIAG++ D P VP Sbjct: 288 LKPSYGLVPYTGAMSIDPSLDHVGPMARTVHDCALILEAIAGHN--DGLDPRQPRSIIVP 345 Query: 252 DYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +Y + L Q S++G+ + I KE + P +D ++ I L AGA+I E+S+P Sbjct: 346 EYTKELSQCSLEGIKIAILKEGFGQADSDPKVDTLVKKAIDQLAYAGAQITEVSIPLHAE 405 Query: 310 ALPAYYIISPAEASSNLARYDGVR--YGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + I+ N G R Y + + + Q++ +++G Sbjct: 406 CTNIWAAIAYEGLLDNTVMTGGYRGFYPTSMMSSAGKSLKARVNDLNHSQKIA--MLMGQ 463 Query: 368 YVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 Y+ ++ Y S Y + + IR L+ + + + ++ DVI PT P +A L K+ N Sbjct: 464 YMKTN--YQSQVYGKGQNIRLLLTQAYDDVYKD-YDVIAMPTVPFTASDLPKKNCNLSKF 520 Query: 427 GHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + ++ T+A N+ G P++++ A + + P+GL L G+ F E L V EK Sbjct: 521 LELSTNMNSNTMAANLTGHPSLTINAGYLDTQ-PVGLLLTGRVFEEVLLLQVASTFEK 577 >gi|150376438|ref|YP_001313034.1| amidase [Sinorhizobium medicae WSM419] gi|150030985|gb|ABR63101.1| Amidase [Sinorhizobium medicae WSM419] Length = 474 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 152/483 (31%), Positives = 232/483 (48%), Gaps = 43/483 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + E+ +RLR +++V L +++ I N +A++ V A+ A A A +D+ + G Sbjct: 8 LPILEAAERLRDGRLTSVALTVAHLDRIAERNGAYHAFLHVAAESALAEAARADEALGCG 67 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + R L GIP+ +KD F T G+ T S + G+ P ++ V ++L GAV++GKL Sbjct: 68 EDRGPLHGIPVAVKDLFDTAGMPTTYGSDVYAGYLPTEDAEVVRRLRAAGAVLIGKLETY 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAM + P +PW +FT GGSS GS+AAVAG L S+ +DTGGS+R Sbjct: 128 EFAMVGPVFDRSFPPAANPW----DVRRFT-GGSSSGSAAAVAGGLVRTSVASDTGGSVR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA++ G VG KPTYGR G+ +PSLD G+I+ +V ++AI AIA + DA Sbjct: 183 SPAAYCGVVGFKPTYGRIPARGVFVLSPSLDHVGLISASVAEAAITFDAIADAETTDAE- 241 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLD--YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P R L ++ G+ +G +++ D P + S L GA+I E++ Sbjct: 242 -----PAASR-LGGALSGLRIGYARKWFADDPETLPALLDAVDGAASQLSLLGARIEEVA 295 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP +I AEA ++ R L G G+ ++V I Sbjct: 296 LPAAPDFESVGAVIIHAEA------FEAHRRQLAASGD------------GYSRKVFQNI 337 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G L+ A ++R I R F D ILT TT T A P + Sbjct: 338 LSG-LCLTPEDLVRARHAAARLRDRIDRTVFARF----DAILTATTLTPAIPFADFAGEA 392 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + + T+A N+ G PA+SVP +PL +QL G+ E TL +G E+ Sbjct: 393 AR----WTPMRTIAFNVTGHPALSVPCGFA-NGLPLAIQLAGRAGDEATLCQIGHAYEQA 447 Query: 484 AGY 486 + + Sbjct: 448 SDF 450 >gi|163855151|ref|YP_001629449.1| putative amidase [Bordetella petrii DSM 12804] gi|163258879|emb|CAP41178.1| putative amidase [Bordetella petrii] Length = 538 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 133/463 (28%), Positives = 222/463 (47%), Gaps = 40/463 (8%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATK 85 V + + IE + A++EV A+ A A A + D G R L G+P+GIKD F + Sbjct: 84 VRASLAEIEQAAPGRLAWVEVDAEAALAEARQRDDERRRGRVRGPLHGMPVGIKDMFDRQ 143 Query: 86 G-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 G + D ++TV +L GAV+LG +M EFAM + + YGP +P Sbjct: 144 GRVAGWGTPLRRDSAPADADATVVARLRAAGAVVLGVQHMAEFAMSPTGWNASYGPGRNP 203 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 W T + + G SSG + + AG + A IG+DTGGS+R PA+ G G+KPT R S Sbjct: 204 W----DTGRVSGGSSSGAAMSVAAGHVPLA-IGSDTGGSVRLPAALCGLTGLKPTQHRIS 258 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 G + +PSLD G + + +A+AG D D +C++ PV Q + + Sbjct: 259 VAGAMPLSPSLDCIGPLAWSAELCGHACRALAGADAADPSCLHAPV-----VAGQPPRRL 313 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 V +P+ D +S + + + + L+DAG + V ++ P Y ++ A + Sbjct: 314 RVAVPRWRDDDPMSGAMRQALDEAVRALRDAGVECVAVASP--------YPLLQRAGQLA 365 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 ++ L VE + + + R+ G+G++V+ RI G V ++ LR Sbjct: 366 SIV--------LAVEAAAMHQRWLRERADGYGRQVRRRIARGLLVPGVDYCNALRLRGPF 417 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND-----VFTVAVN 439 +R ++ EA D +L P TP A + ++ G + + +T VN Sbjct: 418 LRRHLRETLGEA-----DALLLPCTPDVAPRV--DDTLGDDQGRLEREFALLSAWTRGVN 470 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 GLPA+++P +PLG+QL+G P E+ + ++G++ ++ Sbjct: 471 YLGLPALTLPVGAGAGGLPLGMQLVGPPLGEDRVLALGRLFQR 513 >gi|270263418|ref|ZP_06191687.1| amidase [Serratia odorifera 4Rx13] gi|270042302|gb|EFA15397.1| amidase [Serratia odorifera 4Rx13] Length = 466 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 147/492 (29%), Positives = 226/492 (45%), Gaps = 49/492 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ ++++E R L+ ISA E+ ++ I+ N +NAY + ++ + A+ D Sbjct: 1 MNPLSALSIAEIRAALKQGAISAREIAQQTLENIDTFNPSLNAYTHITRERMLSEADHLD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVM 118 + G L IP +K+ F G T A + + P + KL GA++ Sbjct: 61 RIRAKGQTLPSLAAIPYAVKNLFDVTGETTLAGASLFSDRAPAKQDAWAVGKLAAQGALL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P D+T GGSSGGS+AAVA L S+G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATRNP---HDTTR--IAGGSSGGSAAAVAAGLVTFSLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR P+S G G+KPT+GR SR G F SLD G R VRD A + + G Sbjct: 176 DTNGSIRVPSSLCGIYGLKPTFGRLSRGGSQPFVASLDHVGPFARRVRDLAAVYDVMQGT 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D P+ E L + QG+ + Y + + QQ L+ Sbjct: 236 DIEDRFQAEKPITQTESLLPRGQQGLRCAVLAGYFQQWCNDDAKAAVQQVAMALE----A 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 E+ LP + A A +IIS AE G Y ++ + E +E Sbjct: 292 CAEVELPQAELARSAAFIISAAEG--------GNHYLPQLRSQP--ERFEPLS------- 334 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + + + Y++A++ R ++ FE D+++ P TP SA LG+ Sbjct: 335 -RERLLAGAMLPA-----AWYVQAQRFRAHFQQQVLPLFEHW-DILIAPATPCSATSLGQ 387 Query: 419 EENN--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 E SMG + T ++ GLP ++VP +P+GLQLI P+RE Sbjct: 388 ETMRINGADLPIRASMG-----MLTQPISFLGLPVVTVPLK-TASGLPIGLQLIAPPWRE 441 Query: 471 ETLFSVGQIIEK 482 + +E+ Sbjct: 442 DLALRAAYALEQ 453 >gi|168001836|ref|XP_001753620.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695027|gb|EDQ81372.1| predicted protein [Physcomitrella patens subsp. patens] Length = 575 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 135/479 (28%), Positives = 224/479 (46%), Gaps = 46/479 (9%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 R E + + ++ + + + +I +++ R A ES +R G A L+G+P Sbjct: 113 RVTPTQVAERIIATVEEAKKRSPSLVYFISFLSEDVRKQATESTERYKKGTALSVLDGVP 172 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD + A + L R E V+ +L G +M+GK M E MG++ Sbjct: 173 LAVKDDIDCLPHPSTAGTKWLPQVREVKEDAVSIARLRSCGMMMIGKAVMHELGMGTTGS 232 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++G +P ++T GGSS G A VA LC ++GTD GGSIR P+S G + Sbjct: 233 NPHHGTARNP----HDLGRYT-GGSSSGPGAIVASGLCPVALGTDVGGSIRIPSSLCGNI 287 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPT+GR + G+ S++ +G I + D+ ++ A+ G D + P+P Sbjct: 288 GLKPTFGRITNEGLFCVGWSMESSGPIASSTEDALLVYAAMVGSHPTDKLH-SWPLPPCV 346 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDK----TWQQGISWLKDA-GAKIVEISLPHTQY 309 L+ Q + + D+ + T +K + ++ + + G + EI LP Sbjct: 347 PDLNVGFQAIMGSLKLGKYSDWFNSTFEKEVAEVCNKSLNLIFETFGTETKEIILPELDE 406 Query: 310 ALPAYYIISPAEASSNLARYD-GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ +E S LA YD + L +E + L +++ ++ Sbjct: 407 IKIAHLCTVGSEYVSGLAGYDTKLLKELSLEVQGTLGLFKEFTAL--------------- 451 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-----FPLGKEENNS 423 YL ++KIR + +AFE VDVI+TPTT T+A L E++ Sbjct: 452 ---------DYLSSQKIRRRAMYFYMQAFES-VDVIVTPTTGTTAPVISSAALTVGESDL 501 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++G++ F +A N GLPAISVP + +P+GLQLIG+P++E TLF V E+ Sbjct: 502 TTVGNLMR--FIIAPNFLGLPAISVPVGHDSRGLPIGLQLIGRPWQEATLFRVAAAFEE 558 >gi|118592082|ref|ZP_01549476.1| indole acetimide hydrolase [Stappia aggregata IAM 12614] gi|118435378|gb|EAV42025.1| indole acetimide hydrolase [Stappia aggregata IAM 12614] Length = 515 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 150/496 (30%), Positives = 244/496 (49%), Gaps = 56/496 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ M+ +E D + + +SA +LV++ I + N YI ++ A AAA +D+ Sbjct: 47 DITTMSAAEMADAIAGQTLSATDLVNALIA--RTGDDPGNVYITFDSEGALAAAAAADES 104 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L G+PI +KD A G+ T + L G+ P ++ V +KL D GA++LGK Sbjct: 105 VKAGEPLGPLHGVPIVVKDNIAAVGLPTTGGTPALKGWVPREDAPVLKKLRDAGAILLGK 164 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ E A G ++ + +G V + + +F GGSSGG+ AAV L A +GTDTG Sbjct: 165 TNLHELAFGITSNNAAFGAVANAY----DPSRFA-GGSSGGTGAAVGARLAPAGLGTDTG 219 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG---- 237 GS+R P++ G G++PT GR GI+ + + D G I RTV D +L I G Sbjct: 220 GSVRIPSALNGVAGLRPTTGRYPAEGIVPISTTRDTPGPIARTVADLILLDAVITGSTTQ 279 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + D + V L VP G+T D LSP D+ +++ + LKD G Sbjct: 280 LEPADLSTVRLGVP----------GGLT---------DNLSPETDRLFKEALEKLKDVGV 320 Query: 298 KIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVR-YGLRVEGKDILEMYENTRSIGF 355 +V + + + A A + I+ E +LA + + GL+++ DI + ++ + F Sbjct: 321 TLVPVDISTELELAGKAGFPIALWEVKRDLAAFLEIHETGLKLQ--DIAD-EADSPDVKF 377 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSAF 414 V +++G + Y + +R LI+ + E F +D ++ PTTP A Sbjct: 378 ---VFDNLVLGNQAIPDDVYRAAM---DDMRPLIQSGYAEVFAANKLDALVFPTTPLPAQ 431 Query: 415 P-LGKEENNSGSMGHIYNDVFTVAV--------NMAGLPAISVPAALCEKKMPLGLQLIG 465 P LG +E S + DV T ++AG+P +S+PA L +P+GL+L G Sbjct: 432 PILGSDETVSLN----GEDVPTFPTFIRNTDPGSVAGIPGLSLPAGLTSDGLPVGLELDG 487 Query: 466 QPFREETLFSVGQIIE 481 F + L S+G +E Sbjct: 488 PAFSDRHLLSLGLAVE 503 >gi|302772024|ref|XP_002969430.1| hypothetical protein SELMODRAFT_270796 [Selaginella moellendorffii] gi|300162906|gb|EFJ29518.1| hypothetical protein SELMODRAFT_270796 [Selaginella moellendorffii] Length = 606 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 135/478 (28%), Positives = 227/478 (47%), Gaps = 43/478 (8%) Query: 17 RSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 +S I+ ++ + ++ A++ S M+ +I + AEES R G L+ Sbjct: 141 KSGRITPTQVAERFLSAVDESIKGQPGMSIFIAYNPRDILRQAEESTSRYKQGKPLSVLD 200 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+PI +KD T + + R E + KL GA+++GK NM E G+ Sbjct: 201 GVPIAVKDELDCLPYDTTGGTKWMSKVRDVKEDAACVSKLRACGAMLVGKTNMHELGQGT 260 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + +YG +P+ ++ SSGGS+AAVA LC A++G D GGS+R PA+ Sbjct: 261 TGINPHYGATRNPYNKAKASGG-----SSGGSAAAVACGLCPAALGVDGGGSVRMPAALC 315 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 G VG+K T+GR S G++ ++ G++ TV D+ I+ A+ G+ D V++P Sbjct: 316 GIVGLKGTFGRISSHGVLPLNWTVGSVGVLAATVEDTLIMYAAVHGHLSSDRI-VSIPPQ 374 Query: 250 --VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +P R +++I + + E+ D D+ + K G K VE+++P Sbjct: 375 VTLPQLNRIENEAIGSLKLAKYTEWFDDSDPDVKDRCYAALSKLQKRYGCKTVEVTIPEL 434 Query: 308 QYALPAYYIISPAEASSNLA-RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + A+++ E S++ +Y+ V G+ G DI +GF Sbjct: 435 EEMRLAHFVTIGCECYSSIGIQYENV--GVTATGADI--------RVGFS---------- 474 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 L ++ YL A+++R + F+ DVI+TPTT +A + + G + Sbjct: 475 ---LYKSFTNTEYLSAQRMRYRQMYYHMQIFKNA-DVIVTPTTAATAPSISLDALECGEL 530 Query: 427 GHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++Y + +A N GLPAISVP + MP+G+QLIG+P+ E TL + +IE Sbjct: 531 NYVYGAKLMRYQIAGNFIGLPAISVPVGFDQAGMPIGIQLIGKPWSEATLLRLAYVIE 588 >gi|297200490|ref|ZP_06917887.1| amidase [Streptomyces sviceus ATCC 29083] gi|297147664|gb|EDY53649.2| amidase [Streptomyces sviceus ATCC 29083] Length = 532 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 153/507 (30%), Positives = 234/507 (46%), Gaps = 57/507 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E + + ++E R + + A EL Y++ IE + ++A IEV R A +R Sbjct: 39 EFDELGITELRRLMDRGRLDAQELTRYYLERIERIDPLLHAVIEVNPDAVREA-----RR 93 Query: 63 IINGDARD--LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G R L GIP+ +KD T +HT A S L+G RP ++TV +L GAV+L Sbjct: 94 LDRGQGRRGPLHGIPVLLKDLVETGDRMHTTAGSLALEGLRPARDATVAARLRAAGAVIL 153 Query: 120 GKLNMDEFAMGSS-----NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GK N+ E+A G S ++ G +P++ +D + P SS G+ AVA LC A Sbjct: 154 GKTNLSEWAGGLSVTHHAGWSARGGQTRNPYK-LDRS----PNESSSGTGVAVAANLCVA 208 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 IGT+T GSI P+S VG+KPT G R G+I PS D G + RTVRD+AI+L Sbjct: 209 GIGTETNGSIIDPSSANCVVGVKPTVGLVGRGGVIPGVPSQDSVGPMARTVRDAAIMLGT 268 Query: 235 IAGYDECD-ATCVNLP--VPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 + G D D AT + DY R LD ++G +G+P+ Y S D+ ++ I Sbjct: 269 LVGVDGRDPATTASRGHFHRDYTRFLDADGLRGARIGVPRAVYFGY-SDHADEIAERAIG 327 Query: 291 WLKDAGAKIV---EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 ++ AGA IV +I LP ++ E L Y G +D+ E+ Sbjct: 328 VMRAAGAVIVDPADIPTAEQLEDLPGSTVVQAYEFKRALNTYLAAAGG--EHPRDLAELI 385 Query: 348 ENTRSIGFGQEVKHRIMIGTYVL-----SSRCYDS------HYLRARKIRTLIKRDFTEA 396 R+ +E+++ G + S R Y+ RA I +++R Sbjct: 386 AFNRAHA-DRELRYARQDGLEAVERLDFSKREYEEALAVNRRLSRAEGIDAVLRR----- 439 Query: 397 FEQGVDVILTPTT-PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 +D ++ PTT P + L + G Y + +AG PA+SVPA Sbjct: 440 --HRLDALVMPTTGPPAKIDLIR--------GDTYGGGASTPAALAGYPAVSVPAGFA-F 488 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEK 482 +P+G+ +G + E L + E+ Sbjct: 489 GLPVGVTFMGTAWSEPVLLRLAYAYER 515 >gi|164658936|ref|XP_001730593.1| hypothetical protein MGL_2389 [Malassezia globosa CBS 7966] gi|159104489|gb|EDP43379.1| hypothetical protein MGL_2389 [Malassezia globosa CBS 7966] Length = 323 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 172/325 (52%), Gaps = 38/325 (11%) Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV----- 250 +KP+YG SR G++S+A +LD GI+ R + D + +A DE DATC++ + Sbjct: 1 MKPSYGMLSRWGVVSYADTLDTVGILARNIGDVRQVFDVLALEDERDATCIHEAMRLRLD 60 Query: 251 PDYERALDQ---SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 ER L + + G+ VGI KE Y + S T+D + ++ GA +V +S+P Sbjct: 61 AQVERILARIPSRLDGLRVGIVKEMYPREVDSRTLDIV-DDVLDHMQSLGATLVPLSVPA 119 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVE--GKDILEMYENTRSIGFGQEVKHRIM 364 + ++ AYYI+S +EASSNL R+DG+R+G R++ + RS GFG EVK RI+ Sbjct: 120 IKKSVSAYYILSLSEASSNLGRFDGIRFGARMKHTSSTFHDEIAKNRSYGFGDEVKRRIL 179 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--------------EQGVDVILTPTTP 410 +GTY L+S ++SH+L A +IR I R + + E GVDV++ PT Sbjct: 180 LGTYALTSEAWESHHLVATRIRQGILRGYQACWSTQDLRWPEPTGNEEHGVDVVVQPTAL 239 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-------EKKMPLGLQL 463 + A L + ++ + DV T A N+AGLPA+S PA+ +P+G+ Sbjct: 240 SVAPRLDEPVSSEYAA-----DVLTFAANLAGLPALSAPASRTISMDEDPSVHLPVGVLF 294 Query: 464 IGQPFREETLFSVGQIIEKEAGYFR 488 Q ++ LF + + + + F+ Sbjct: 295 KAQWGHDKLLFHILEQLNQHTDVFQ 319 >gi|317052921|ref|YP_004119275.1| Amidase [Pantoea sp. At-9b] gi|316953248|gb|ADU72719.1| Amidase [Pantoea sp. At-9b] Length = 504 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 131/422 (31%), Positives = 214/422 (50%), Gaps = 24/422 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ + L+G P +++TV +L D GA +LGK + F + Sbjct: 88 LAGKTVALKDNVALAGVPMMNGATSLEGHVPLFDATVVTRLLDAGATILGKATCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T+ PV +PWR ++ GGSS GS+A VA +IG D GGSIR P++F Sbjct: 148 GGSHTADPAPVHNPWRQ-----GYSAGGSSSGSAALVAAGEVDMAIGCDQGGSIRIPSAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 GT G+KPT+G GI+ ++D AG IT TV D+A++L+ +AG D D + Sbjct: 203 CGTYGMKPTHGLVPYTGIMPIEATIDHAGPITATVADNALMLEVMAGPDGLDPRQYSSRG 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +Y AL + ++G+ +GI E ++L L P + + ++ L+ GA + EIS+P + Sbjct: 263 GNYTAALGKGVKGLKIGILTEGFQLPNLQPEVALKVRNAVARLESLGAVVGEISVPGHRL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR--SIGFGQEVKHRIM 364 A + I + + +G+ G EG +L+ + R + +K ++ Sbjct: 323 AAALWSPIGCEGLTMQMMHGNGM--GFNWEGLYDVALLDKHAAWRDHADSLSPSLKICML 380 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-----E 419 IG Y L SR + Y +A+ I + D+ A D+++ PT P +A PL + Sbjct: 381 IGQYGL-SRYHGRFYAKAQNIARRARADYDSALSD-FDLLVMPTVPITAQPLPEVDCSIT 438 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E S + I N T A+++ G PA+S+P L +P+G+ LIG+ + E T++ Sbjct: 439 EYISRAFEMIGN---TAALDVTGHPAMSIPCGLV-AGLPVGMMLIGRHYAESTIYQAASA 494 Query: 480 IE 481 E Sbjct: 495 FE 496 >gi|332712290|ref|ZP_08432218.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Lyngbya majuscula 3L] gi|332349096|gb|EGJ28708.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Lyngbya majuscula 3L] Length = 544 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 151/509 (29%), Positives = 234/509 (45%), Gaps = 48/509 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIIN 65 ++E +++ +LV Y+ IE + Q +N I + + A E +R Sbjct: 42 IAEINQAFEKNALTSEQLVQLYLNRIEAYDDQGPKINGLISINNNALKEARELDQERQQK 101 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L GIPI +KD + T + T S +L+G P ++ +KL + GA++LGK NM Sbjct: 102 GPRSPLHGIPIILKDNYDTTDLPTTGGSVLLEGSLPPDDAFTVKKLREAGAIILGKANMS 161 Query: 126 EFA--MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA G +S G +P++ P GSSGGS A +A + G+DT GS Sbjct: 162 EFAESYGRLGYSSLGGLTRNPYKLTRD-----PSGSSGGSGAVIAANFAVLATGSDTSGS 216 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD- 242 IR PA+ G VGIKPT G SR GII S D AG + RTV D+AI L +AG D D Sbjct: 217 IRGPAAVAGLVGIKPTQGLVSRDGIIPLTLSFDSAGPMARTVTDAAIALGVMAGVDPNDY 276 Query: 243 --ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 V DY + L+ ++++G +G+ ++R +P +D ++ L++ GA + Sbjct: 277 RTLESVGKTYKDYTQFLNKKALKGARIGVAIDFRGG--NPEVDAATDAAVAKLRELGATV 334 Query: 300 VEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENT------- 350 + P + P ++ AE + D L++ D L EMY + Sbjct: 335 ESVDFSPKLENLWPFMEEVTEAEFEPQI---DSYLKNLQLPFPDTLREMYSMSLSNPLVN 391 Query: 351 --------RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 R GFG+ +KH + T L ++ +R ++I +++ Q +D Sbjct: 392 SEQALNPGRVGGFGESLKHPELADTEYLYILHFEFPRVR-QEILSIMN-------AQNLD 443 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLG 460 I+ PT A PL E+ + ND + N++G P ISV E+ +PLG Sbjct: 444 AIIWPTMTCPAGPLYNVEDPTYQCAS--NDPYIPGYLANVSGFPGISVAMGFTEQGLPLG 501 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRP 489 L G+P+ E TL E+ + RP Sbjct: 502 LTFFGKPYSEPTLLGFAYAYEQATQFRRP 530 >gi|39137|emb|CAA39649.1| indoleacetamide hydrolase [Agrobacterium tumefaciens] Length = 470 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 140/495 (28%), Positives = 225/495 (45%), Gaps = 54/495 (10%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++++ +RLR KD S +ELV++ I E + + R A++ D+ +G+ Sbjct: 6 SLAQTLERLRRKDYSCLELVETLIARCEAAKALNALLATDWG-GLRRRAKKIDR---HGN 61 Query: 68 A-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ K AT T A + L P S + ++L+ GA+ NM E Sbjct: 62 AGVGLRGIPLCFKANIATGIFPTTAATPALINHLPKIPSRIAERLFSAGALPGASGNMHE 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G ++ G V +PW PGGSSGG +AAVA L IGTDTG S+R Sbjct: 122 LSFGITSNNYATGAVRNPW-----NPSLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRL 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +PT GR R II +P+ D AGII + V D IL + I+G Sbjct: 177 PAALCGVVGFRPTLGRYPRDRIIPVSPTRDTAGIIAQCVADVVILDQVISGR-----PAR 231 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP+P ++G+ +G+P Y D L + + I L + G VE +PH Sbjct: 232 ILPIP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEADIPH 282 Query: 307 TQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK- 360 + +LP P L + G V ++ + RS V Sbjct: 283 LEDLNSGASLPIALYEFPHALKQYLDDFVGT-----VSFSSFSDVIKEIRSPDVANIVNA 337 Query: 361 ----HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H+I Y L+ + + A R++ + +D IL PT P +A + Sbjct: 338 QIDGHQISNAEYELARQSFRPRLQAA-------YRNYFRLYR--LDAILFPTAPLAAKAI 388 Query: 417 GKEEN--NSGSMGHIYNDVFTVAVN---MAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 G++ + ++GSM + + ++ V+ AGLP +S+P L ++P+G+++ G + Sbjct: 389 GQDSSVIHNGSMVNTFK-IYVRNVDPSSNAGLPGLSLPVGLTPDRLPVGMEIDGLAGSDH 447 Query: 472 TLFSVGQIIEKEAGY 486 L ++G +EK + Sbjct: 448 RLLAIGAALEKAINF 462 >gi|312171447|emb|CBX79705.1| probable amidase [Erwinia amylovora ATCC BAA-2158] Length = 467 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 142/489 (29%), Positives = 225/489 (46%), Gaps = 49/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++SE + L + ++SA E+ + AIE +N Q+NA+ + + A+ D Sbjct: 3 LASLSISELKRALAAGELSAREVASQTLAAIERANPQLNAWTAITEDRMLREADRLDGLQ 62 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGK 121 NG +L +P +K+ F G T A + +L P +++ KL +G ++ G Sbjct: 63 RNGQPLPELAAVPYAVKNLFDVAGHTTLAGASLLSDRPPASHDAWAVAKLAASGGLLSGM 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P + SSGGS+AAVA L S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGATRNPHDAARIAGG-----SSGGSAAAVAAGLVHFSLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRSGTHPFVASLDHIGPFARRVDDLAQVYDILQGRDAS 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D N PV D ++G+ G+ + L + L E Sbjct: 238 DGFQANKPVQPVTPLPDAGLEGLRCGVLGGWFLQWCDDDARAAVASAARALD----ACEE 293 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP A A +II+ +E ++ +R+ + E +E + Sbjct: 294 VLLPEAGLARSAAFIITASEGGNHY--LPALRH--------MPERFEPLS--------RE 335 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R++ G + + + Y++A++ R ++ F Q VDV++ P TPTSA +G+E Sbjct: 336 RLLAGAMIPA-----AWYVQAQRFRRHFQQQVLPLF-QHVDVLIAPATPTSATLIGQETL 389 Query: 422 N--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + SMG + T ++ GLP +VP MP+GLQLI PF+E+ Sbjct: 390 HINGCDLPVRASMG-----MLTQPISFLGLPVTTVPLR-TAGGMPIGLQLIAAPFKEQAC 443 Query: 474 FSVGQIIEK 482 +++E+ Sbjct: 444 LRAARVLEQ 452 >gi|330971500|gb|EGH71566.1| amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 482 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 135/484 (27%), Positives = 232/484 (47%), Gaps = 40/484 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + ++E+ + +S V LV+ ++ I + +NAY+ V ++A AAA + I Sbjct: 1 MKHLTLAEASRLIARGVLSPVTLVEQTLEHIRRVDPFLNAYVTVNGEEAIAAAHLAQDAI 60 Query: 64 INGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIPI +KD T G T S + P +++ V L GA+++GK Sbjct: 61 RNGQWLGPLHGIPIAVKDIIDTAGTTTTCHSRLYADHVPAHDAAVVSLLKAAGAIIIGKA 120 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EFA+G + + P +PW+ TD P GSS GS+ AVA +C ++G+DTGG Sbjct: 121 STWEFAIGGTAFDLPWPPARNPWQF--ETD---PSGSSSGSAVAVAAGMCLGALGSDTGG 175 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA++ G G KPTYG S G+ + SLD G + TV D AI+ + + G + Sbjct: 176 SIRGPAAWCGVAGFKPTYGLISVDGVFPLSHSLDHVGPMAWTVEDCAIMAQVMIGASGVE 235 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDAGAKI 299 A LD ++G+ VGI + + + +P + + + +++ K++G +I Sbjct: 236 ALSSQGAEASLTADLDGDVRGLRVGIVRHFH-EKDAPCEMEVKLAFDEAVAFFKESGCEI 294 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V+++L Q +++ AEA + DI EN + +G+ Sbjct: 295 VDVTLAPLQTYQDVGVVVARAEA-------------FALHHTDI----END-PLAYGRMT 336 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ G ++ ++ D+ L++ TL+++ E VDV+L PT T A LG+ Sbjct: 337 RLRVTAGAFLSAADYGDAKKLQS----TLVEQ--AEKAMLDVDVLLMPTRGTVATALGQY 390 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + ++T N+ G PA+++ +P+ LQ++ + F + VG Sbjct: 391 DPLKS------RQIYTQPFNVLGFPALALSMGQACSGLPISLQVVARSFNDAMALRVGHF 444 Query: 480 IEKE 483 EK Sbjct: 445 FEKH 448 >gi|328868088|gb|EGG16468.1| amidase family protein [Dictyostelium fasciculatum] Length = 625 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 138/483 (28%), Positives = 243/483 (50%), Gaps = 48/483 (9%) Query: 19 KDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 K +AV + ++++ ++S++Q + A+I V A +S +R G L+G+ Sbjct: 148 KSTNAVAVAKAFVECQKHSDAQPIPLKAFISVREDDILEQAAKSQERWEAGTPLSILDGV 207 Query: 75 PIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 PI IKD KG T + L D +S ++L + GA+++GK NM E + + Sbjct: 208 PISIKDELNMKGYRTTCGTAFLRDSPVWQVDSDCAERLRNMGAILVGKNNMHEIGISTLG 267 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +YG +P+ ++D + PGGSS GS++ V+ L SIG D GGSIR PA+ G Sbjct: 268 YNVHYGFTRNPF-NLD----YYPGGSSSGSASTVSSGLNPISIGCDGGGSIRVPAALCGV 322 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---V 250 VG+KPTY R S G S+ G I +V D AI A+AG D D + P + Sbjct: 323 VGLKPTYARTSHTGCFDLCYSVGHVGPIASSVIDCAIGYAALAGKDPRDHQTLVQPDPLI 382 Query: 251 PDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P++ + ++ + G+ +GI ++Y +D + I ++++ I L + GA++V I + H Y Sbjct: 383 PNFSKIPKEKPLTGLRIGIYQDY-VDDCTEEIRISFKKSIEILVEQGAQVVPIKINHLLY 441 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A +I +E ++++++Y G Y+N F + + + + +V Sbjct: 442 IRLAQAVIILSEMNNSMSKYMG--------------KYKNQ----FHLDTRASLSMMEFV 483 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP------LGKEENNS 423 YL + +IRT FE VD+I+TP+T +++ P L E+N Sbjct: 484 SGGE-----YLHSCRIRTYAINQLKAIFEN-VDIIVTPSTASTS-PEIRPSVLATGESNL 536 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ + F N+ G+P +++P ++ + +P+GLQL+G+ + E+ L G ++EK Sbjct: 537 TAVAELMKYAFL--GNITGVPGLTIPVSVDKNNLPIGLQLMGRWWEEDLLLYTGYVLEKH 594 Query: 484 AGY 486 G+ Sbjct: 595 VGF 597 >gi|240171546|ref|ZP_04750205.1| amidase [Mycobacterium kansasii ATCC 12478] Length = 541 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 130/435 (29%), Positives = 206/435 (47%), Gaps = 20/435 (4%) Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I +G L G + IKD A G+ S ++GF P ++TV ++L GA + GK Sbjct: 112 IASGAQGPLSGRTVAIKDNIAVAGLPMMNGSRAVEGFVPSRDATVVRRLLAAGATIAGKS 171 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 ++ S+ TS GPV +PW + T SS GS A VA ++G D GG Sbjct: 172 VCEDLCCSGSSFTSASGPVRNPWDTTRETGG-----SSSGSGALVATGEVGLALGGDQGG 226 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA+ G VG+KPTYG G ++D G +TRTV D+A+LL +AG D D Sbjct: 227 SVRIPAALCGIVGLKPTYGLVPYTGAFPIERTIDHLGPMTRTVADAAVLLTVLAGPDGHD 286 Query: 243 ATCVNLPVP-DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 P DY AL + G+ VG+ E + P +D+ + + G + Sbjct: 287 PRQSAAIAPLDYRAALTGDVTGLRVGMLSEGFGWTGSRPEVDELVRSAARRFAEIGCTVG 346 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRSIG--- 354 EIS+P + A+ + +I A+ + +G GL V+G +++ + R + Sbjct: 347 EISVPWHRRAIHVFNVIITDGATYQMLEGNG--SGLGVDGLYDPELMAHFARQRVVKADE 404 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 F +K + G Y +R + Y +AR + ++ + A E DV++ PT P +A Sbjct: 405 FASTIKATALCGHYS-RNRLGGAVYAKARNLVPHLRAAYDGALEH-YDVLVMPTVPGTAN 462 Query: 415 PLGK-EENNSGSMGHIYNDVFTVA-VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 PL + + G + H + A +++ G PAISVPA L + +P G+ ++G+ F + Sbjct: 463 PLPEGSPQDVGLLPHTFGKALNTAPMDITGHPAISVPAGLVD-GLPAGMMIVGKRFDDAN 521 Query: 473 LFSVGQIIEKEAGYF 487 + V E G F Sbjct: 522 VLRVAAAFESLCGGF 536 >gi|251794314|ref|YP_003009045.1| amidase [Paenibacillus sp. JDR-2] gi|247541940|gb|ACS98958.1| Amidase [Paenibacillus sp. JDR-2] Length = 676 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 148/500 (29%), Positives = 240/500 (48%), Gaps = 54/500 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + E + M++ ++ + + +++ ELV Y+ I + +++ I V A + Sbjct: 196 LMEADIMSI---QNAMAAGKLTSEELVQMYLDRINEYDDDIHSLITVNPDALATAKALDE 252 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G + GIPI +KD + T G+ T A L + ++ + +KL D GA++L Sbjct: 253 ERKEQGPRGLMHGIPIIVKDNYDTLGMPTSAGCTCLKDNQTVSDAFMIKKLKDAGAIILA 312 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EFA+ + +S G ++P+ D T PGGSSGG+ A++A L A +GTDT Sbjct: 313 KANLSEFAINTDTNSSLGGQTLNPY---DLTKN--PGGSSGGTGASLAANLGVAGLGTDT 367 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P+S+ VGI+PT G SR GII A S D G + RTV D+AILL A++GYD Sbjct: 368 GGSIRIPSSWNSIVGIRPTIGLTSRDGIIPLALSQDVGGPMARTVSDAAILLDAVSGYDP 427 Query: 241 CD---ATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D A V Y + LD++ ++G +G+ + + + + Q ++D G Sbjct: 428 NDIATAGSVGRKPASYTKFLDKNGLKGARIGLVMDSSVIGSNQEVLALLNQAAQDMRDQG 487 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARY---------DGVRY----GLRVEGKDI 343 A +V +++P+ L Y +S E NL Y + VRY + G D Sbjct: 488 ATVVGVNIPNIADIL-KYPSLSGYEFKFNLNDYLSNTRFVDPNVVRYHSLQDIINSGTDF 546 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVD 402 L + ++T + E L ++ Y D R R + + R + +D Sbjct: 547 LSVLKSTLTTRNNVES----------LDTQEYKDIMLFRPRTTQQSLLRLMAD---NNLD 593 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 IL P+T + P G N+ + +G PAISVPA +P+G++ Sbjct: 594 AILYPST---SGPAGSSSGNANRLSP-----------FSGFPAISVPAGYVSSGLPVGIE 639 Query: 463 LIGQPFREETLFSVGQIIEK 482 L+G+P+ E L +G E+ Sbjct: 640 LLGRPYEEGELIKLGYAYEQ 659 >gi|11499536|ref|NP_070778.1| Glu-tRNA amidotransferase, subunit A (gatA-1) [Archaeoglobus fulgidus DSM 4304] gi|7674442|sp|O28325|Y1954_ARCFU RecName: Full=Putative amidase AF_1954 gi|2648588|gb|AAB89301.1| Glu-tRNA amidotransferase, subunit A (gatA-1) [Archaeoglobus fulgidus DSM 4304] Length = 453 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 123/469 (26%), Positives = 223/469 (47%), Gaps = 43/469 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 ++L+ +I ELV+ ++ IE N ++NA++ + +KA A+++D + L G Sbjct: 9 EKLKGGEIKPAELVEECLEKIERLNPKINAFV-TLNEKAIEEAKKADV------STPLAG 61 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD T+GI T CS + + P ++ + ++L GAV++GK NM EF + + Sbjct: 62 LPIAIKDNVETRGIRTTYCSKFYENYVPEEDAVLVERLKKAGAVIIGKTNMPEFGLIAYT 121 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +GP +PW + G S G ++A AG L AS G D GGSIR PASF G Sbjct: 122 DNPMFGPTRNPW----DLSRTVGGSSGGSAAAVAAGILPVAS-GNDGGGSIRIPASFCGL 176 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KP++GR + L G +TR V D+A++L + G+D D + Y Sbjct: 177 YGLKPSFGRVPCYPSLPIFIGLHSEGFLTRYVEDTALMLDLVKGWDIRDVKSLPDEEFSY 236 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYALP 312 +A+++ G+ + + + P +++ ++ L+ G + V++SLP+ + L Sbjct: 237 LKAIEEHPDGVRIAFSPDLGYAIVDPEVEEKVREAAFKLEKFGEVEEVKLSLPNLEQELV 296 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 ++ + + G R + ++V +G L+ Sbjct: 297 TKVVL-------EVVTFIGDR-------------------MAEWEKVAFPPYLGFMALAQ 330 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---EENNSGSMGHI 429 Y++ + + + + FE+ D ++TPT F +GK EE ++ I Sbjct: 331 SLTFREYIKIEERKMELWKALRGIFEE-YDYLITPTVACKPFEIGKLGPEEIAGKAITPI 389 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 FT N G PA S+PA ++ +P+G+Q++G+P+ + + V + Sbjct: 390 GWMPFTYPFNFTGQPAASIPAGFSKEGLPIGMQIVGKPYDDVGVLKVSK 438 >gi|310766714|gb|ADP11664.1| amidase [Erwinia sp. Ejp617] Length = 466 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 139/489 (28%), Positives = 223/489 (45%), Gaps = 50/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++SE + L + ++SA E+ + AI+ +N Q+NA+ + + A+ D R Sbjct: 3 LASFSISELKRALAAGELSAREVASQTLAAIDQANPQLNAWTGITEDRMLREADRLDDRQ 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGK 121 + L +P +K+ F G T A + +L RP +++ KL +G ++ G Sbjct: 63 RHDPLPALAAVPYAVKNLFDVAGHTTLAGASLLSD-RPVAAHDAWAVNKLAASGGLLSGM 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P M + GGS+ +A + F S+G+DT Sbjct: 122 LNMDAYAYGFTTENSHYGATRNP-HDMARIAGGSSGGSAAAVAAGLVHF----SLGSDTN 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G D Sbjct: 177 GSIRVPASLCGIFGLKPTFGRLSRSGTHPFVASLDHIGPFARRVSDLAQVYNVLQGRDAS 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D+ + V LD ++G+ G+ + + L DA +IV Sbjct: 237 DSFQADKAVQPVTPLLDAGLEGLRCGVLGGWFQQWCDDDARAAVASAARAL-DASEEIV- 294 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 LP + A A +II+ +E ++ E + E +E + Sbjct: 295 --LPQAELARSAAFIITASEGGNHYL----------PELRHAAERFEPLS--------RE 334 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R++ G + + Y++A++ R ++ F+ VDV++ P TPTSA +G+E Sbjct: 335 RLLAGAMIPA-----VWYVQAQRFRRHFQQQVLPLFKD-VDVLIAPATPTSATLIGQETL 388 Query: 422 N--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 SMG + T ++ GLP +VP MP+GLQLI PF+EE Sbjct: 389 RINGCDLPVRASMG-----MLTQPISFLGLPVTTVPLR-TAGGMPIGLQLIAAPFKEEAC 442 Query: 474 FSVGQIIEK 482 V +++E+ Sbjct: 443 LRVARVLEQ 451 >gi|300709810|ref|YP_003735624.1| Amidase [Halalkalicoccus jeotgali B3] gi|299123493|gb|ADJ13832.1| Amidase [Halalkalicoccus jeotgali B3] Length = 500 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 141/503 (28%), Positives = 234/503 (46%), Gaps = 29/503 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59 E+ V++ D + ++ ELV+ Y I+A + + ++NA + V A E Sbjct: 6 EITEATVADIHDAYEAGTLTCRELVEQYEQRIEAYDRNGPELNAVVTVNPHAVERAEELD 65 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G L GIP+ IKD T G+ T S ++P ++T+ ++L D GAV+L Sbjct: 66 EAFESEGLVGPLHGIPVAIKDQVETAGVRTTFGSEAFADYQPSADATLVEELRDAGAVVL 125 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K N+ ++A +S G +P+ ++D PGGSS G+ AAVA L IG D Sbjct: 126 AKTNLPDWATSWFGYSSVLGRTKNPY-ALDRD----PGGSSSGTGAAVAANLATVGIGED 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA++ GI+ T G SR G+ S D G +TRTV D A +L GYD Sbjct: 181 TGGSIRLPAAYNNLFGIRVTPGLLSRTGMSPLVVSQDTPGPMTRTVTDLATVLDVAVGYD 240 Query: 240 ECDA-TCVNLPVP--DYERALD-QSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWL 292 D T V V Y ALD ++ G +G+ ++ D P + + + I + Sbjct: 241 PSDEYTAVTEFVEGVSYADALDPDALGGARIGVLRDAFGDPDDPDSGPVTRLVDEAIDTM 300 Query: 293 KDAGAKIVE-ISLPHTQYALP--AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 +AGA+IV+ + +P + + YI A++ +L + R V+ + E+Y++ Sbjct: 301 AEAGAEIVDPVDIPSLDEHIERTSLYI---AQSKRDLNDFFAAREDAPVDS--VAELYDS 355 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPT 408 + + + + I I + Y + +R + + +DV+L P Sbjct: 356 GQ---YHEILDLLIGIAEDGPEDPEDEPDYWERVAAQMAFQRSILTVYADHDLDVLLCPD 412 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P +G + + TV + +G A+S+PA L E+ +P+G++LIG+P+ Sbjct: 413 --VQVVPPTAASIEAGELDTLTFPTNTVIASQSGCCAVSMPAGLTEEGLPVGVELIGKPY 470 Query: 469 REETLFSVGQIIEKEAGYFRPHK 491 E TL + E+ RP + Sbjct: 471 DEATLVGLAAAYERVVAPRRPPE 493 >gi|224060987|ref|XP_002300309.1| predicted protein [Populus trichocarpa] gi|222847567|gb|EEE85114.1| predicted protein [Populus trichocarpa] Length = 602 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 145/483 (30%), Positives = 225/483 (46%), Gaps = 52/483 (10%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFA 83 E + S I+ + + M I A++ R A S KR G L+GI I IKD Sbjct: 144 EKIISVIEELNKKDPPMPLLISFDAEEVRKQAAASTKRFEEGSPISILDGIFIAIKDDID 203 Query: 84 TKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 ++ + + RP E V+ +L G + +GK NM EF MG++ YG Sbjct: 204 LYPHPSKGGTTWMHEVRPVEEDAVSVSRLRCCGVIFVGKANMHEFGMGTTGNNPNYGTTR 263 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +P + D++T GGSS G +A VA LC+A++GTD GGSIR P+S G VG+K TYGR Sbjct: 264 NP----HALDRYT-GGSSSGPAAIVASGLCSAALGTDGGGSIRIPSSLCGVVGLKTTYGR 318 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ--- 259 + G + ++ G I +V D ++ AI G + D +N P P L Sbjct: 319 TNIRGSLCDHGTVAIIGPIASSVEDVMLVYAAILGSNPADRISLN-PSPPCLPNLSSCDG 377 Query: 260 --SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISLPHTQYALPAYYI 316 ++ + +G + D S + T + ++ L K G ++VEI +P Q A+ + Sbjct: 378 ADALGSLRLGKYTAWFNDVQSTDVSDTCEDMLNLLSKTHGCEMVEIVIPEMQEMRTAHLL 437 Query: 317 ISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 +E +L +E GK + Y++ S+ + Sbjct: 438 SIGSEFMQSLIP--------DIEDGKGVRLNYDSRTSVALFRSFSA-------------- 475 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PTSAFPLGKEENNSGSMGH 428 S Y+ A+ +R + E F++ VDVI+TPTT P+ A G E N G+ Sbjct: 476 -SDYIAAQCLRRRLMYHHMEIFKK-VDVIVTPTTGMTAPKIPSGALSYG--ETNLQVTGY 531 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + F VA N+ G PAIS+P ++ +P+GLQLIG+P+ E TL + +E+ Y + Sbjct: 532 LMR--FVVAANLLGFPAISIPVGYDKQGLPIGLQLIGRPWGEATLLRLASAVEEL--YAK 587 Query: 489 PHK 491 P K Sbjct: 588 PKK 590 >gi|269836938|ref|YP_003319166.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269786201|gb|ACZ38344.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 469 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 135/474 (28%), Positives = 218/474 (45%), Gaps = 47/474 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ +E R + +S VE+ + ++ IE N +NA+I V A A +++ Sbjct: 5 DLCYLPATELRRLYAERALSPVEVTRAVLERIERLNPTLNAFITVTPDLAMDQALAAERD 64 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G A R L G+PI IKD T+GI T S + + P +++ ++L+ G VMLGK Sbjct: 65 YAAGRADRPLLGVPISIKDLSVTRGIRTTRGSLVWKDWVPDFDAPFVERLYAAGGVMLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N E + GP +PW+ T GGSSGG+ AAVA L + G+D Sbjct: 125 TNTPELGWKGDSGNRVIGPTHNPWKH-----GRTAGGSSGGAGAAVAAGLGPLAQGSDGA 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAP----SLDQAGIITRTVRDSAILLKAIAG 237 GSIR P++F G G+KP++G I S+ P SL G +TRTVRD+A++L +AG Sbjct: 180 GSIRIPSAFCGIFGLKPSFGL-----IPSYPPSAVESLSHIGPMTRTVRDAALMLDVMAG 234 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 +D D ++ +P + A D + G+ V ++ + P I + + +D G Sbjct: 235 FDPRDRLSLDPKIPSFVAACDGGVAGLRVAWSRDMGYAVVDPEIGDIAARAAAVFRDLGC 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++ E++ I S A A ++ VR L ++E + Sbjct: 295 EVEEVNPGWDDPFQILDAIWSTAMAGVFRDNFEQVRDQLDPGLVRVIEAGRQVSGVDLAA 354 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++ R S ++ D F + D++LTPT P +AF G Sbjct: 355 AMQRR--------------SQFV-----------DQVRRFMERYDLLLTPTMPLAAFRAG 389 Query: 418 KEENNSGSMG-----HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 ++N G + + FT N+ G PA +VPA E +P+GLQ++G+ Sbjct: 390 --DDNPGEIAGQPVTRLSWTPFTYPFNLTGQPAATVPAGFTEAGLPVGLQIVGR 441 >gi|292487340|ref|YP_003530212.1| putative amidase [Erwinia amylovora CFBP1430] gi|292898585|ref|YP_003537954.1| amidase [Erwinia amylovora ATCC 49946] gi|291198433|emb|CBJ45541.1| probable amidase [Erwinia amylovora ATCC 49946] gi|291552759|emb|CBA19804.1| probable amidase [Erwinia amylovora CFBP1430] Length = 467 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 142/490 (28%), Positives = 224/490 (45%), Gaps = 49/490 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 L +++SE + L + ++SA E+ + AIE +N Q+NA+ + + A+ D Sbjct: 2 NLASLSISELKRALAAGELSAREVASQTLAAIERANPQLNAWTAITEDRMLREADRLDGL 61 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLG 120 NG L +P +K+ F G T A + +L P +++ KL +G ++ G Sbjct: 62 QRNGQPLPALAAVPYAVKNLFDVAGHTTLAGASLLSDRPPASHDAWAVAKLAASGGLLSG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 LNMD +A G + E S+YG +P + SSGGS+AAVA L S+G+DT Sbjct: 122 MLNMDAYAYGFTTENSHYGATRNPHDAARIAGG-----SSGGSAAAVAAGLVHFSLGSDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G D Sbjct: 177 NGSIRVPASLCGIFGLKPTFGRLSRSGTHPFVASLDHIGPFARRVDDLAQVYDILQGRDA 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D N PV D ++G+ G+ + L + L Sbjct: 237 SDGFQANKPVQPVTPLPDAGLEGLRCGVLGGWFLQWCDDDARAAVASAARALD----ACE 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ LP A A +II+ +E ++ +R+ + E +E + Sbjct: 293 EVLLPEAGLARSAAFIITASEGGNHY--LPALRH--------MPERFEPLS--------R 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + + + Y++A++ R ++ F Q VDV++ P TPTSA +G+E Sbjct: 335 ERLLAGAMIPA-----AWYVQAQRFRRHFQQQVLPLF-QHVDVLIAPATPTSATLIGQET 388 Query: 421 NN--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + SMG + T ++ GLP +VP MP+GLQLI PF+E+ Sbjct: 389 LHINGCDLPVRASMG-----MLTQPISFLGLPVTTVPLR-TAGGMPIGLQLIAAPFKEQA 442 Query: 473 LFSVGQIIEK 482 +++E+ Sbjct: 443 CLRAARVLEQ 452 >gi|124265965|ref|YP_001019969.1| amidase [Methylibium petroleiphilum PM1] gi|124258740|gb|ABM93734.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Methylibium petroleiphilum PM1] Length = 472 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 221/478 (46%), Gaps = 43/478 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD--ARDLEGIPIG 77 ++SA +V + + I +++++NA+ ++ AQ+A A D R GD A L G+P Sbjct: 22 EVSASAMVQASLARITATDARVNAFTDLTAQRALERAATLDARHAAGDTAALPLLGVPFA 81 Query: 78 IKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +K+ F +G+ T A S I P + + ++L GAV++G LNMDE+A G + E S Sbjct: 82 VKNLFDVQGLATLAGSKIERERAPALRDGPLVERLEAAGAVLVGALNMDEYAYGFTTENS 141 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 + G +P S + G + ++ V ++G+DT GSIR P+S G G+ Sbjct: 142 HAGATHNPHDLARSAGGSSGGSGAAIAAGQVP-----LTLGSDTNGSIRVPSSLCGVFGL 196 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYGR R G F SLD G R+V D A+ + G++ D CV P+ Sbjct: 197 KPTYGRLPRHGSYPFVASLDHLGPFARSVPDLALSYDLLQGWEAADPGCVQRPIEPTHAT 256 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 L + G+ + + Y ++ P ++ + L + LP A A ++ Sbjct: 257 LARGAGGLRIAVLGGYFHEHALPEARAAVERVAAAL----GVTRRVELPEVARARAAAFL 312 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 IS AE ++ + D+ TR+ F + R + G + + Sbjct: 313 ISNAECAT-------------LHLGDL-----RTRAQDFEPLSRDRFLAGALLPA----- 349 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSM-GHIYNDV 433 + L+A+++R + E F Q VDV+L P TP A LG E E N + + Sbjct: 350 AWVLQAQRVRRWFAQRAAELFGQ-VDVLLAPATPCVAPRLGTEWLELNGQRLPARPSLGL 408 Query: 434 FTVAVNMAGLPAISVPAALCEKK---MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 T ++ GLP +VP C + +P+G+Q+I P+RE+ VG +E AG R Sbjct: 409 LTQPISCIGLPVCAVPVWGCSEAQPGLPIGVQVIAAPWREDHALRVGAALEA-AGVVR 465 >gi|119479493|ref|XP_001259775.1| amidase, putative [Neosartorya fischeri NRRL 181] gi|119407929|gb|EAW17878.1| amidase, putative [Neosartorya fischeri NRRL 181] Length = 533 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 136/436 (31%), Positives = 199/436 (45%), Gaps = 31/436 (7%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N D L G + +KDC A G+ S ++ + P ++TV +L D GA +LG Sbjct: 95 NADGGPLAGKTVSLKDCIAVAGVPQLLGSDVIPSWTPITDATVVTRLLDAGADILGTSTC 154 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + F + + TS G V +P+ + ++ GGS+ G +A VAG L +IG D GGSI Sbjct: 155 ENFCHSTGSYTSAQGVVENPFAA-----GYSAGGSTSGGAALVAGGLVDITIGGDQGGSI 209 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS G VG+KPT+G GI S D AG + R V+D A+ L AI+GYD D Sbjct: 210 RVPASLCGCVGLKPTHGLVPFTGISSGDAVNDHAGPLARNVQDIALCLDAISGYDGIDDR 269 Query: 245 CVNLPVPD---YERALDQS---IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 + P P + R L + G + + KE + + P + + K+ GA Sbjct: 270 SLGSPKPGSTAFSRTLHAEPTRLDGFRIALLKEGFDHAAVDPAVRECVGMAAQRFKELGA 329 Query: 298 KIVEISLP-HTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + EISLP H Q PA + I A S NL + R GL + + + S Sbjct: 330 TVEEISLPEHLQG--PAIWTIQQRIAGSMNLLGHAHGRRGLYLTEMERARLPWTNESYQR 387 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 ++I LSSR D + R L RD E + DV++ PTTP A Sbjct: 388 AFPATKNVIINGLYLSSRFPDLYGKTMNIGRRL--RDLYETILEQYDVVIMPTTPVVAPR 445 Query: 416 LGKE----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIG 465 GK E+ SMG N T ++ G PA+S+P + +P+G+Q++G Sbjct: 446 HGKRGLPLESVKPSMGLTIN---TAIFDVTGQPAMSIPVGFAPARDDANVQLPVGMQIVG 502 Query: 466 QPFREETLFSVGQIIE 481 ++E + G E Sbjct: 503 GLWQESKVLRAGHAWE 518 >gi|309792604|ref|ZP_07687066.1| amidase [Oscillochloris trichoides DG6] gi|308225418|gb|EFO79184.1| amidase [Oscillochloris trichoides DG6] Length = 518 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 138/474 (29%), Positives = 231/474 (48%), Gaps = 50/474 (10%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 +L+++ IS VEL + + + Q+NA+ V+A++A A A+ ++ I G R L G Sbjct: 88 QLQARTISPVELTRQALDLLAARDPQLNAFQVVLAEQALADAQAAEAAISAGAYRGPLHG 147 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ +KD G T A S IL + P ++T +L GA+++GK M EFA + Sbjct: 148 IPVAVKDLLDLVGTPTTAGSKILADYYPSQDATSVAQLRAAGAIIIGKTRMSEFAYSPGS 207 Query: 134 ETSYYGPVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YGP +P DS + + + AVA ++GTDTGGSIR PA+ G Sbjct: 208 NNGHYGPTANPHNPERDSGGSSSGSAVAVATGMAVA------ALGTDTGGSIRIPAAQCG 261 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPT+GR S G ++ + SLD G +TR+V D+AI+L+ ++G D D ++ P Sbjct: 262 IVGLKPTHGRTSLAGGVTLSWSLDHLGPLTRSVSDAAIMLEVLSGPDGRDGRTLHTVPPF 321 Query: 253 YERALDQSIQGMTVGI-----PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 L +G+ VG+ + D TI G L+ AGA++V + + Sbjct: 322 RAAGLAPQARGIRVGVLGADGSGAPQADV--ETIAAVHAAG-ERLRAAGAEVVAVDVAEI 378 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + A +++P + A + LR TR + + ++ RI+ Sbjct: 379 E----ALRLLNPVILAMEAAAFH--LPNLR------------TRLNDYAEFMRQRIL-AA 419 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 +V + + +++A++ R ++++ FEQ +D++ P P A ++G Sbjct: 420 FVYGA----ATFVQAQQARAVLRQRMAALFEQ-IDILALPVVPHPA----------PALG 464 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I FT N G PAIS+PA + +PL +QL+ +P+ E L V ++E Sbjct: 465 VITATTFTGPFNCLGWPAISMPAGFSREGLPLAVQLVARPWAEAELLRVAMVLE 518 >gi|281209446|gb|EFA83614.1| amidase family protein [Polysphondylium pallidum PN500] Length = 605 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 134/467 (28%), Positives = 230/467 (49%), Gaps = 50/467 (10%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGF 99 + A+I V A S +R G L+G+P+ IKD +G T + L Sbjct: 162 LGAFIAVNDDDVLEQARASQQRWKQGTPLSILDGVPVSIKDEVDQRGYKTTCGTSFLGKI 221 Query: 100 R--PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPG 157 ++ KL +NGA+++GK NM E + + ++G + +P+ + D + PG Sbjct: 222 NGAAQADAYPVDKLRENGALLVGKANMHEIGISTLGYNLHHGFIRNPF----NLDHY-PG 276 Query: 158 GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ 217 GSS GS+++V+ L SIG D GGS+R PAS G VG+KPT+GR S G ++ Sbjct: 277 GSSSGSASSVSAGLNPISIGCDGGGSVRVPASLCGVVGMKPTFGRVSHTGTFDLCSTVGH 336 Query: 218 AGIITRTVRDSAILLKAIAGYDECDATCVNLP---VPDYER-ALDQSIQGMTVGIPKEYR 273 G ++ TV D+AI IAG D D + P +P ++ L++ +QG+ VG+ KE+ Sbjct: 337 IGPLSSTVVDNAIAYAVIAGRDPLDFQTMIQPEPIIPVFQDIPLNKPLQGIRVGVFKEWC 396 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 D +P I +++ ++ L++ GA V+ S+ + + ++ +E ++++R+ Sbjct: 397 ND-CTPDIQAAFKKSLTVLEEQGATFVDYSISDLLHIRLSQIVLILSEMRNSMSRF---- 451 Query: 334 YGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 K +++ +TR V +M G S YL + RT Sbjct: 452 -----WDKHRTDLHNDTR-------VSLSLMDG-------ITSSDYLHCNRFRTHAIEQL 492 Query: 394 TEAFEQGVDVILTPTTPTSA-----FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 E F Q VDVI+TPT T A + L E+N + + F N+ G+P +S+ Sbjct: 493 KEIF-QSVDVIVTPTNATLAPKIMPYVLSNGESNMSDIAELMK--FAFLGNITGVPGLSI 549 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE------AGYFRP 489 P ++ E+ +P+G+QL+G+ + E+ L+ G ++E+E +F+P Sbjct: 550 PISVNEENLPIGIQLMGRWWEEDLLYYTGYVLEREFKFNGVPKFFKP 596 >gi|324513990|gb|ADY45723.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ascaris suum] Length = 261 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 88/235 (37%), Positives = 138/235 (58%), Gaps = 6/235 (2%) Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +A++G D D+T V+ P + + D+ + G+T+GIP EY +L+ K W L Sbjct: 9 EAMSGRDSRDSTSVDPPQSCFMQ--DRKLDGITIGIPLEYHNRFLTQDCWKAWNNAAEVL 66 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTR 351 G K+ EIS+PHT+Y++ Y++++ A+ +SN+ARYDGV YG R + + MY ++R Sbjct: 67 VKLGCKLKEISMPHTEYSIICYHVLAEADIASNMARYDGVAYGHRSKDRSSTHSMYASSR 126 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTP 410 S + V+ RI G Y L R YD ++++A ++R LIK+DF AF+ G D +LTP T Sbjct: 127 SEALNEVVRRRIFAGNYFLMKRHYDEYFVQALRVRRLIKKDFEHAFKDLGCDALLTPVT- 185 Query: 411 TSAFPLGKEENN-SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 P E N+ SG +D FT NMAG+PAI++P K +P+ +Q++ Sbjct: 186 CGVPPYFSEINHISGYERERIDDFFTQPANMAGVPAIAIPFTETSKGLPIAVQIM 240 >gi|317053895|ref|YP_004117920.1| Amidase [Pantoea sp. At-9b] gi|316951890|gb|ADU71364.1| Amidase [Pantoea sp. At-9b] Length = 467 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 139/480 (28%), Positives = 223/480 (46%), Gaps = 50/480 (10%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 ++R + S+V LV ++ I+ +N +NA+ +V Q+A A AE D+ G R L G Sbjct: 13 QIRQGESSSVALVALCLRQIKTNNPTLNAFGDVYDQQALAEAEICDRERQQGKLRGPLHG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P GIKD FAT G+ T S P ++ + +L GA+++GK EF S+ Sbjct: 73 VPFGIKDLFATAGLRTTKGSLTSLDNVPDSDAPIIARLKAAGAIIIGKTATTEFGWTGSS 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +G +PW D+T T GGSS GS+ +VA + A++G+D GGS+R P +F G Sbjct: 133 FSRVFGHGRNPW---DTT--LTSGGSSSGSAISVAARMVPAALGSDGGGSVRIPGAFCGI 187 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +K + GR S L AG +TRTVRDSA+L ++G D D + ++ Sbjct: 188 FALKASLGRIPTWP-WSATEMLSHAGPMTRTVRDSALLFDLLSGPDARDHQALPAKTENW 246 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 D + + V + SPT+ T + D A VE ++ +ALP Sbjct: 247 LARCDAPLPPLRV---------HYSPTLFNT------PVDDRIAACVEQAVEQMAHALPV 291 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI---GTYVL 370 P S +D ++ R + +G ++H++ + G L Sbjct: 292 TLTAKPLSWQSPFETFD--------------TLWSGGRGVAYGAALQHQLHLLDPGFAAL 337 Query: 371 SSRCYD---SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEEN 421 +R + YL A+K R F++ VD+++TPT P F P G+ E Sbjct: 338 IARAQRIELADYLHAQKQRAAFAGQVHALFDE-VDLLITPTLPVLPFAADRHVPEGQPEG 396 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +SG + FT N++G PA +VP + +P+GLQ+IG+ + E + +E Sbjct: 397 DSGVEWARWTP-FTWPFNLSGNPAATVPCGFTPEGLPVGLQVIGRRYAEADVLQFCAALE 455 >gi|308189380|ref|YP_003933510.1| amidase [Pantoea vagans C9-1] gi|308055995|gb|ADO08164.1| amidase [Pantoea vagans C9-1] Length = 504 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 124/427 (29%), Positives = 209/427 (48%), Gaps = 34/427 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD A G+ + L+G P +++TV +L D GA +LGK + F + Sbjct: 88 LKGKTVALKDNVALAGVPMMNGAASLEGHVPVFDATVVTRLLDAGATILGKATCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA-----SIGTDTGGSIR 185 + TS PV +PWR G S G S++ + L AA ++G D GGSIR Sbjct: 148 GGSHTSDPAPVHNPWRQ----------GHSAGGSSSGSAALVAAGEVNMAVGCDQGGSIR 197 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++F GT G+KPT+G GI+ ++D AG IT +VRD+A++L+ +AG D D Sbjct: 198 IPSAFCGTYGMKPTHGLVPYTGIMPIEATIDHAGPITASVRDNALMLEVMAGPDGLDPRQ 257 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + Y AL++ + G+ +GI E + L L P + + + I LK GA+ E+S+ Sbjct: 258 YSPRCGHYTAALEKGVSGLKIGIVTEGFGLPNLQPAVAEKVRAAIDRLKSLGAQAGEVSV 317 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRSIGFGQEV 359 A + I + + +G+ G EG + + + T + + Sbjct: 318 QGHTLAAALWSPIGCEGLTMQMMHGNGM--GFNWEGLYDVALLDKHAGWRTNADSLSPSL 375 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 K ++IG Y L +R +Y +A+ + + D+ A D+++ PT P +A PL Sbjct: 376 KICMLIGQYGL-TRYNGRYYAKAQNLARRARADYDRALSD-FDLLVMPTVPVTAPPL--- 430 Query: 420 ENNSGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ S+ + F T A+++ G PA+SVP L +P+G+ L+G+ + E T++ Sbjct: 431 PSSDCSITEYISRAFEMIGNTAALDVTGHPAMSVPCGLA-GGLPVGMMLVGRHYDESTIY 489 Query: 475 SVGQIIE 481 E Sbjct: 490 QAAAAFE 496 >gi|167967028|ref|ZP_02549305.1| amidase amiD (acylamidase) [Mycobacterium tuberculosis H37Ra] Length = 378 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 133/411 (32%), Positives = 191/411 (46%), Gaps = 54/411 (13%) Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 T A + I FRP Y++TV +L GAV++GKL M E A Y+ + +P Sbjct: 6 TAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKLAMTEGAY-----LGYHPSLPTPVNPW 60 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 D T G SS G A A LC SIG+DTGGSIR P S G GIKPT+GR SR G+ Sbjct: 61 DPTAWA--GVSSSGCGVATAAGLCFGSIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGV 118 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 + A S D G ITR+ D+A+LL IAG D D +C PVPDY A D ++ + Sbjct: 119 VELAASYDHVGPITRSAHDAAVLLSVIAGSDIHDPSCSAEPVPDY--AADLALTRI---- 172 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 P + W Q S+ +D A + ++ P + PA A +A Sbjct: 173 ----------PRVGVDWSQTTSFDEDTTAMLADVVKTLDDIGWPVIDVKLPALA-PMVAA 221 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 + +R VE R+ +G ++ I G H L A + +TL Sbjct: 222 FGKMRA---VETAIAHADTYPARADEYGPIMRAMIDAG-----------HRLAAVEYQTL 267 Query: 389 IKR--DFTEAFEQ---GVDVILTPT----TPT--SAFPLGKEENNSGSMGHIYNDVFTVA 437 +R +FT + + VD++L P+ +PT + LG++ + + + T Sbjct: 268 TERRLEFTRSLRRVFHDVDILLMPSAGIASPTLETMRGLGQDPELTARLA-----MPTAP 322 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 N++G PAI +PA + PLG+Q IG+ F E L G ++ GY R Sbjct: 323 FNVSGNPAICLPAGTTARGTPLGVQFIGREFDEHLLVRAGHAFQQVTGYHR 373 >gi|110634721|ref|YP_674929.1| amidase [Mesorhizobium sp. BNC1] gi|110285705|gb|ABG63764.1| Amidase [Chelativorans sp. BNC1] Length = 480 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 143/483 (29%), Positives = 220/483 (45%), Gaps = 80/483 (16%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +D+S VELV + IE + +++YI V+ + A A A E++ R++ R L+GIP Sbjct: 46 RDLSPVELVKHMLLRIERLDGTLHSYITVLPEAALAQAREAEVRMMRRQPRGPLDGIPYN 105 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD T GI T S + P ++ +L G V+LGK EFA G + + Sbjct: 106 LKDIIDTAGIRTTCHSRLRTDVVPVRDADAAARLKSAGGVLLGKSATHEFAFGGPTDDTP 165 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 + +PW T+++ GGSS G++ AVA + S+GTDTGGS+R P+SF G V +K Sbjct: 166 FPQPRNPW----DTERYA-GGSSSGAAVAVAARMALGSVGTDTGGSLRIPSSFCGVVSMK 220 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVPDYER 255 P+ GR + G+ APSLD G + D A+L +A+A G E R Sbjct: 221 PSRGRINTEGVFPLAPSLDHVGPVAANAADCAVLFEALAVDGLVE-------------PR 267 Query: 256 ALDQSIQGMTVGIPKEYRLDY---LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++G+T G+P+++ +D LSP + + +Q +D GA V+++ P Sbjct: 268 MPADGLKGLTAGLPRDW-IDNQAELSPAVRRALRQMEDLARDLGATTVDLAPPPLSEFRA 326 Query: 313 AYYIISPAEA--------SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 A +++ EA RY V + RV +L+ E H M Sbjct: 327 AVSLLTAWEAYRIHAVDLGRQFLRYSDV-FRRRVAPAALLD------------EADHASM 373 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGK 418 I +T + F FEQ D IL P T T+A PL + Sbjct: 374 IAA------------------KTRLSAAFNALFEQ-CDFILMPATATTAPLLTGLDPLAE 414 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S F+ N+ G P++++ A K +P+GLQL+G EE LF++ Sbjct: 415 AARPSS---------FSQPTNLTGSPSLTIRAGFDRKGLPIGLQLVGPMRAEELLFAIAC 465 Query: 479 IIE 481 IE Sbjct: 466 RIE 468 >gi|332286068|ref|YP_004417979.1| glutamyl-tRNA amidotransferase [Pusillimonas sp. T7-7] gi|330430021|gb|AEC21355.1| glutamyl-tRNA amidotransferase [Pusillimonas sp. T7-7] Length = 443 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 156/481 (32%), Positives = 241/481 (50%), Gaps = 70/481 (14%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 R + S +++VD + IE+S+ +NAYI V+A +ARA A+ + + +G A L G+P Sbjct: 12 RKGERSPIDIVDELLADIESSS--INAYITVMADQARAEAKAAQAQFASGKAVGTLAGVP 69 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD G T + P ++ V ++L GA+++GK N +FA GS+ + Sbjct: 70 IAVKDLIDVAGYRTTMGAEQYAENVPKDDAEVVRRLRKAGAIIIGKANTHQFAYGSTGDR 129 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG--- 192 SY+G V +P PGGSS GS+A+VA L S+GTDT SIR PA+ G Sbjct: 130 SYFGAVRNPRNP-----SRVPGGSSSGSAASVAAGLAYGSLGTDTSASIRLPAALCGIVG 184 Query: 193 ---TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 T+G+ PT G+ + +LD G I+ V+D+A+LL+ I+G C T Sbjct: 185 MKATLGLVPTQ------GVFPLSKTLDHVGPISTCVQDNALLLEVISG--SCAGT----- 231 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y + QS+QG+ +G+P + +Y+S ++ + Q + L+ AGA + + + + Sbjct: 232 ---YSSKIGQSVQGLVIGVPSNFYSEYVSSAVNSSLQAALQALEAAGAVVKTVDVDNI-- 286 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 Y I YD + L+ E E N ++ F +EV+ R++ G V Sbjct: 287 ----YEI------------YDAQQLVLKTEAYAQHEASLNAQA-PFIKEVQDRLLTGKDV 329 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L+S YLR K +++ + F +A E VDV+LTPT +A PL E HI Sbjct: 330 LASE-----YLRNLKYQSIAQACFDKALEH-VDVLLTPTCGVTA-PLLDERTT-----HI 377 Query: 430 YND---------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + T N +G P++SVP E MP+GLQLIG+ E TL+ VG + Sbjct: 378 NGEDRSTPWLLTRLTAPTNFSGHPSLSVPFMQDESGMPVGLQLIGKLHDEATLYQVGNQL 437 Query: 481 E 481 E Sbjct: 438 E 438 >gi|326332513|ref|ZP_08198786.1| amidase family protein [Nocardioidaceae bacterium Broad-1] gi|325949703|gb|EGD41770.1| amidase family protein [Nocardioidaceae bacterium Broad-1] Length = 473 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 139/494 (28%), Positives = 221/494 (44%), Gaps = 42/494 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + +E RS + ++ + + I + +NA++ V A A A S +R Sbjct: 6 LSALTAAELVAGYRSGAFTPLDATRAVLDTIAERDPAVNAFVRVDPDGALAQATASTERW 65 Query: 64 INGDARDL---EGIPIGIKDCFATKGIHTQACSHILD--GFRPHYESTVTQKLWDNGAVM 118 G R L +G+P +KD T G+ T + ++D G P ++ +L + GAV+ Sbjct: 66 RAG--RPLGSADGVPTSVKDILWTAGLPTIRGTWLIDEAGAWPE-DAPAVARLREAGAVI 122 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK EFA E+ +G +PW T GGSSGG++ AV + ++GT Sbjct: 123 TGKTTTPEFAWKGVTESLRHGSTGNPWDP-----DLTSGGSSGGAATAVGLGMGPWALGT 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PASFTGTV IKPTYG F +L AG +TRTV D+A LL IAG+ Sbjct: 178 DGGGSVRIPASFTGTVTIKPTYGLVPLYPASPFG-TLSHAGPMTRTVTDAAALLDVIAGF 236 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + + P + LD +QG+ +G P +++ + ++ L GA+ Sbjct: 237 DSRDWSAMPTPRTSFLAGLDDGVQGLRIGFSPTLGYVKNDPEVEQLVRTAVTVLASEGAR 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E+ P + P EA +D + + +++ Y G Sbjct: 297 VEEVD--------PGF--ADPVEA------FDVLWF---CGAAKVVDAY----PAGAIDR 333 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 + + G R + YL A +R + R F + D+++TPT P +AF G Sbjct: 334 IDPLLREGIET-KGRGSAADYLDATAVRMDLGR-LMGRFHETYDLLVTPTMPITAFERGL 391 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + S +T NM PA SVP E +P+GLQ++G + + Sbjct: 392 QAPQGWPSQWWPSWTPYTYPFNMTQQPAASVPCGTTEAGLPVGLQIVGARHDDARVLRAA 451 Query: 478 QIIEKEAG--YFRP 489 + E+ +G + RP Sbjct: 452 RAYERASGEQFARP 465 >gi|293602932|ref|ZP_06685371.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter piechaudii ATCC 43553] gi|292818726|gb|EFF77768.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter piechaudii ATCC 43553] Length = 460 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 140/485 (28%), Positives = 230/485 (47%), Gaps = 48/485 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD- 67 ++E +RLR +D+ A LV Y++ I ++ ++AY+ V A +A AAA +D ++ G Sbjct: 9 ITELAERLRRRDLRAETLVSDYLERITALDAWLHAYVAVYADEALAAARAADLQLDQGIW 68 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI +KD G T S I + + Q+L GA++LGK +M +F Sbjct: 69 LGPLHGVPIALKDLIDITGRPTTIGSPIHANTVAARTAELVQQLQRAGAIILGKTHMVQF 128 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 AMG+ + G +PW D PGGSS GS+ AVAG L A+IGTDTGGS+R P Sbjct: 129 AMGAWGFNQHMGTPRNPW---DDHVHRIPGGSSSGSAVAVAGRLAPAAIGTDTGGSVRVP 185 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G G+KPT GR S G+++ + +LD GI + D+ ++ +A + Sbjct: 186 ASYCGITGLKPTVGRISSRGVVTLSQTLDSVGIFAHSAADARLVFDVLAPAEPG------ 239 Query: 248 LPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++ LD S I G TVG E L ++P + + ++ I+ + GA+IVE+SL Sbjct: 240 ----EWREPLDASRFGIAGATVGRLPEVFLADVAPAVRRAYEASIALYQGLGARIVEVSL 295 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P T LA + V + + EG E ++ V+ R+ Sbjct: 296 PAT------------------LAEFKAVTGDIMMTEGVASFEREMTDSTLPVDDSVRPRL 337 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++G V + R YL A + R ++ + QGV L T + E +++ Sbjct: 338 LVGLDVPAVR-----YLAALRERDRLQAEMQTRL-QGV-AGLLTPTTLTTALPLSEIDHA 390 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + H +T N+ + +SVP E +P GLQ++ + + ++ ++ Sbjct: 391 NAPVH-----YTRIGNLLQMCGVSVPNGRDEAGLPTGLQILCPGGEDRLALYLAEVFQRY 445 Query: 484 AGYFR 488 + + R Sbjct: 446 SDWHR 450 >gi|112774554|gb|ABI20723.1| 2-amino-5-chloromuconate deaminase [Delftia sp. AN3] Length = 440 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 141/468 (30%), Positives = 208/468 (44%), Gaps = 50/468 (10%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFAT 84 L+D+ Q ++NAY +AR+AA D + G D L G+P+ +KD + Sbjct: 3 LIDTCAQHHARMEPRLNAYKTWDGARARSAAAAVDTLLDQGQDLGPLMGLPVSVKDLYGV 62 Query: 85 KGIHTQACSHILDGFRP---HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G+ A S D P + +L +++GK + EFA G +++G Sbjct: 63 PGLPVFAGS---DEALPEAWQAAGPLVARLQRQLGIVVGKTHTVEFAFGGLGVNAHWGTP 119 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +PW + PGGSS G+ ++ ++GTDT GS+R PAS TG VG+K T G Sbjct: 120 RNPWSPHEHR---VPGGSSAGAGVSLVQGSALLALGTDTAGSVRVPASMTGQVGLKTTVG 176 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R GI+ + SLD AG++TRTV D A A+ D LP P R + Sbjct: 177 RWPVEGIVPLSSSLDTAGVLTRTVEDLAYAFAAL------DTESQGLPAPAPVR-----V 225 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 QG+ VG+P + D + P+I + + L AGA++V LPH + A + Sbjct: 226 QGLRVGVPTNHFWDDIDPSIAAAVEAAVQRLAQAGAQVVRFPLPHCEEAFDIFR--RGGL 283 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 A+S LA Y + +VE D + V+ R+ V S YLR Sbjct: 284 AASELAAYLDQHFPHKVERLDPV--------------VRDRVRWAEQVSS-----VEYLR 324 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK----EENNSGSMGHIYNDVFTVA 437 + + F+ VDV+LTPT P S L E +M + N T Sbjct: 325 RKAVLQRCGAGAARLFDD-VDVLLTPTVPASPPRLADIGTVETYAPANMKAMRN---TAI 380 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ G A+++P L +MP+GLQL+G P E L + IE G Sbjct: 381 SNLFGWCALTMPVGLDANRMPVGLQLMGPPRAEARLIGIALGIEALIG 428 >gi|255554561|ref|XP_002518319.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus communis] gi|223542539|gb|EEF44079.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus communis] Length = 607 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 139/489 (28%), Positives = 226/489 (46%), Gaps = 57/489 (11%) Query: 17 RSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 RSK ++ + + I +E + I ++ R A S +R G+ L+ Sbjct: 139 RSKIVTPSTVAEHIISVLEEFKGKKPPTPLLISFDEEEVRKQAAASTRRFEEGNPMSILD 198 Query: 73 GIPIGIKD---CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 GI + IKD C+ H + + ++ +L G + +GK NM E M Sbjct: 199 GIFMAIKDDIDCYPHPSKGATTWMHEVRSVK--KDAVSVSRLRSCGVIFVGKANMHELGM 256 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ YG +P +TD++T GGSS G +A VA LC+A++GTD GGS+R P+S Sbjct: 257 GTTGNNPNYGTTRNP----HATDRYT-GGSSSGPAAIVASGLCSAALGTDGGGSVRIPSS 311 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+K TYGR G + +++ G I +V D+ ++ I G D C+ P Sbjct: 312 LCGVVGLKTTYGRTDMEGSLCHYGTVEIIGPIASSVEDAMLVYSVILGSSPADKICLR-P 370 Query: 250 VPDYERALD--QSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEIS 303 P L +S+ G + +G E+ D S + + ++ L K G +IVEI Sbjct: 371 SPPCLPNLSSYESVGGLGSLRLGKYTEWFNDVHSTDVSDKCEDALNLLSKTHGCEIVEIV 430 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHR 362 +P + A+ + +E S+L+ +E GK + Y+ S+ Q Sbjct: 431 VPELEEMRTAHLVCIGSEMQSSLSP--------DIEDGKGVRLTYDTRTSLALFQSFSA- 481 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PTSAFP 415 S Y+ A+ +R + E F++ VDVI+TPTT P SA Sbjct: 482 --------------SDYVAAQCLRRRLMYHHMEIFKK-VDVIVTPTTGMTAPKIPPSALK 526 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G E + G++ F +A N+ G PAI+VP ++ +P+GLQ+IG+P+ E T+ Sbjct: 527 YG--ETDMQVTGYLMR--FVIAANLLGFPAITVPVGYDKQGLPIGLQIIGRPWAEATILR 582 Query: 476 VGQIIEKEA 484 + IE++A Sbjct: 583 LASAIEEQA 591 >gi|308185782|ref|YP_003929913.1| amidase [Pantoea vagans C9-1] gi|308056292|gb|ADO08464.1| probable amidase [Pantoea vagans C9-1] Length = 465 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 136/479 (28%), Positives = 220/479 (45%), Gaps = 51/479 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 ++ +ISA+E+ +QA+E N +NA+ EV + A D + G+ L GI Sbjct: 15 IQQGEISALEVAKHTLQAVEQHNPALNAWTEVTGPRMLKEASAIDAQRQRGETLPPLAGI 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 P +K+ F G T A + + RP ++ KL GA++ G LNMD +A G + Sbjct: 75 PYAVKNLFDVAGHSTLAGASLFRD-RPAAQADAFAVDKLRHAGALLSGMLNMDAYAYGFT 133 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S+YG +P R + + GGS+ +A + F S+GTDT GSIR PAS G Sbjct: 134 TENSHYGATHNP-RDLSRVAGGSSGGSAAAVAAGLVHF----SLGTDTNGSIRVPASLCG 188 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPT+GR SR G F SLD G + R D A++ + G D DA PV Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPLARRAEDLALVYDLLQGADPADAFQAARPVAA 248 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L Q +G+ G+ + S D + ++ + A E+ +P + A Sbjct: 249 TLPGLSQGSEGLRCGVLG----GFFSRWCDDDARAAVAVVAAALDAQEEVLMPEAELARS 304 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A +I++ AE ++ + +M E F + R++ G + Sbjct: 305 AAFIMTAAEGGNHYL-------------PALRQMPEQ-----FEPNSRERLLAGAMM--- 343 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--------SG 424 + Y++A++ R ++ F+ DV++ P TP SA +G++ + Sbjct: 344 --PGAWYVQAQRFRRYFQQQVLPLFDH-FDVLIAPATPCSAITIGQQTLSIQGESLPAKA 400 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SMG + T ++ GLP +VP A +P+GLQLI +PF EE + ++E++ Sbjct: 401 SMG-----MLTQPISFLGLPVCTVPLA-TRSGLPIGLQLIARPFNEEAVLRAAWVLEQQ 453 >gi|259909380|ref|YP_002649736.1| amidase [Erwinia pyrifoliae Ep1/96] gi|224965002|emb|CAX56530.1| Amidase [Erwinia pyrifoliae Ep1/96] gi|283479451|emb|CAY75367.1| probable amidase [Erwinia pyrifoliae DSM 12163] Length = 466 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 138/490 (28%), Positives = 223/490 (45%), Gaps = 50/490 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 L +++E + L + ++SA E+ + AI+ +N Q+NA+ + + A+ D R Sbjct: 2 NLASFSINELKRALAAGELSAREVASQTLAAIDQANPQLNAWTGITEDRMLREADRLDDR 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLG 120 +G L +P +K+ F G T A + +L RP +++ KL +G ++ G Sbjct: 62 QRHGPLPALAAVPYAVKNLFDVAGHTTLAGASLLSD-RPVAAHDAWAVNKLAASGGLLSG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 LNMD +A G + E S+YG +P M + GGS+ +A + F S+G+DT Sbjct: 121 MLNMDAYAYGFTTENSHYGATRNP-HDMARIAGGSSGGSAAAVAAGLVHF----SLGSDT 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G D Sbjct: 176 NGSIRVPASLCGIFGLKPTFGRLSRSGTHPFVASLDHIGPFARRVSDLAQVYDVLQGRDA 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ + V LD ++G+ G+ + + L DA +IV Sbjct: 236 SDSFQADKAVQPVTPLLDAGLEGLRCGVLGGWFQQWCDDDARAAVASAARAL-DACEEIV 294 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 LP + A A +II+ +E ++ E + E +E + Sbjct: 295 ---LPQAELARSAAFIITASEGGNHYL----------PELRHAAERFEPLS--------R 333 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + + Y++A++ R ++ F+ VDV++ P TPTSA +G+E Sbjct: 334 ERLLAGAMIPA-----VWYVQAQRFRRHFQQQVLPLFKD-VDVLIAPATPTSATLIGQET 387 Query: 421 NN--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 SMG + T ++ GLP +VP MP+GLQLI PF+E Sbjct: 388 LRINGCDLPVRASMG-----MLTQPISFLGLPVTTVPLR-TAGGMPIGLQLIAAPFKEAA 441 Query: 473 LFSVGQIIEK 482 V +++E+ Sbjct: 442 CLRVARVLEQ 451 >gi|239820092|ref|YP_002947277.1| Amidase [Variovorax paradoxus S110] gi|239804945|gb|ACS22011.1| Amidase [Variovorax paradoxus S110] Length = 467 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 143/477 (29%), Positives = 222/477 (46%), Gaps = 58/477 (12%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L ++ I+AV L++ ++A + S + A+ + A AAA ESD+R G R LEG Sbjct: 22 DALAARRITAVALIEQALEAAQASKRDLRAFAAIDRDGALAAAAESDRRYAQGRQRPLEG 81 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 + IG+KD T+GI T S G P ++ V + L + GA+ +GK EFA G + Sbjct: 82 LAIGVKDLIDTQGIETSYGSAAYLGHLPDADADVVRALIERGAIPVGKTATHEFAWGVTT 141 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ++ +G ++P +D T PGGSSGG++AA+A AA +GTDTGGS+R PA+ G Sbjct: 142 ASATFGDTLNP---LDRTR--IPGGSSGGAAAAIACGAVAAGLGTDTGGSVRIPAALCGV 196 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG KP++G GI + AP+LD G + TV D A+L A + +P Sbjct: 197 VGFKPSFGALPTRGIFALAPTLDHPGFLGATVDDVALLAGAF---------HIEMP---- 243 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + A S + +G+ +E S + + ++ L + A + A Sbjct: 244 QHAASPSAR---LGVVREIAPVPPSAEVASAFDTAVAKLGEFLACTTVDAPGLFDGVFEA 300 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + I E R + G++ +E E +SI G Sbjct: 301 FAHIVLTEGGVEHFRRNATDRIATHYGRETIERLERAKSITLGD---------------- 344 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQG---VDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 Y RA++ R RDFT + +D ++ PT P +A + S +GH Sbjct: 345 -----YARAQQAR----RDFTARLHRAMSQLDYLVLPTCPCTA---PQVNQASIDIGHWS 392 Query: 431 NDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 V +T N+AG PAIS+P A + ++P GLQ++ +P R+ L + Q IE Sbjct: 393 GTVREALMTYTAPFNVAGFPAISIPLAARDGRLPAGLQIVAKPGRDGALLQIAQQIE 449 >gi|328543580|ref|YP_004303689.1| Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [polymorphum gilvum SL003B-26A1] gi|326413324|gb|ADZ70387.1| Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Polymorphum gilvum SL003B-26A1] Length = 469 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 141/461 (30%), Positives = 223/461 (48%), Gaps = 39/461 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +RS + A E+ ++ + +E N ++NA+ ++ A +A A A++ D + G L G+P Sbjct: 20 VRSGAVRAREVAEAALVRVERLNPKVNAFTDIAAPRALAEADKVDAALSAGADLPLAGVP 79 Query: 76 IGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +K+ F G+ T+A S I LD ++ + ++L + GAV+LG L+M E+A + E Sbjct: 80 FAVKNLFDIAGLPTRAGSKINLDNPPAASDAFLIERLTEAGAVLLGGLHMGEYAYDFTGE 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++ G +P T SS GS+AAVA + AS+G+DT GSIR P+SF G Sbjct: 140 NAHDGNCRNPHDLTRMTGG-----SSSGSAAAVASGMVPASLGSDTNGSIRVPSSFCGLF 194 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPT+GR SR G F SLD G R+V D A+L + G D D P Sbjct: 195 GLKPTFGRLSRRGTYPFVASLDHLGPFARSVEDLALLFDVLQGADPADPAQAARPALACS 254 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L + I G+ V Y P + + L AGA +VE+ P A A Sbjct: 255 DDLGKGIDGLRVAAAGGYFRQNGEPQAFAAVDRVAAALG-AGA-MVEV--PEAARARAAA 310 Query: 315 YIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+ AE+++ +L R G R F E + R + G V + Sbjct: 311 YVITTAESAALHLPRLRG-------------------RPEDFDPETRDRFLSGAMVPAVW 351 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--SMGHIYN 431 +A+++R + FE+ +D++L P TP A P G G +M N Sbjct: 352 VQ-----QAQRLRAWFRAQMAALFER-IDILLAPATPFPALPSGTRTITLGGEAMPARPN 405 Query: 432 -DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +FT ++ GLP ++VP L + +P+G+Q++ P+RE+ Sbjct: 406 IGLFTQPISFIGLPVVAVPVWLDGETLPIGVQVVAPPWRED 446 >gi|121713062|ref|XP_001274142.1| amidase, putative [Aspergillus clavatus NRRL 1] gi|119402295|gb|EAW12716.1| amidase, putative [Aspergillus clavatus NRRL 1] Length = 531 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 126/434 (29%), Positives = 200/434 (46%), Gaps = 27/434 (6%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N + L G + +KDC A G+ S ++ + P ++TV ++L D G +LG Sbjct: 95 NKEGGSLAGKTVSLKDCIAVAGVPQLLGSDVIPSWTPTTDATVVKRLLDAGVDILGTSTC 154 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + F + + TS G V +P + ++ GGS+ G +A VAG + +IG D GGSI Sbjct: 155 ENFCHSTGSYTSAQGTVENPHAA-----GYSAGGSTSGGAALVAGGVVDITIGGDQGGSI 209 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF G VG+KPT+G GI S D AG + R+V++ A+ L AI+ YD D Sbjct: 210 RVPASFCGCVGLKPTHGLVPFTGITSGDAVNDHAGPLARSVQEVALCLDAISRYDGIDDR 269 Query: 245 CVNLPVP---DYERALDQS---IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 ++ P P + + L ++G +G+ KE + + PT+ + K+ GA Sbjct: 270 SLSSPRPGTTTFAQTLQTEPARLEGFNIGVLKEGFEHSAVDPTVRSCVMAAVQRFKELGA 329 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 I EISLP + + I S +L + R+GL + D + Sbjct: 330 VIEEISLPEHLHGPAIWTIQQRIAGSMSLLGHAHGRHGLYMTELDGARLPWTDEGFQRAF 389 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++I L+SR + Y + I + RD E + DV++ PTTP A G Sbjct: 390 PATKNVIINGLYLASR-FPGLYGKTMNIGRRL-RDLYENIFENHDVVVMPTTPVIASRHG 447 Query: 418 KE----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQP 467 K E+ SMG N T ++ G PA+S+P K +P+G+Q++G Sbjct: 448 KRGLPLESVRPSMGLTIN---TAIFDVTGQPAMSIPVGFASAKDNVDVQLPVGMQIVGGL 504 Query: 468 FREETLFSVGQIIE 481 +++ + G E Sbjct: 505 WQDSKVLRAGHAWE 518 >gi|300715441|ref|YP_003740244.1| Amidase [Erwinia billingiae Eb661] gi|299061277|emb|CAX58386.1| Amidase [Erwinia billingiae Eb661] Length = 466 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 134/486 (27%), Positives = 221/486 (45%), Gaps = 49/486 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++++ + L ++SA E+ + IE +N +NA+ EV + A+ D+ G Sbjct: 6 LSITDIQGALAKGELSAREIAQQTLSHIEAANPAINAWTEVTQDRMLNEADRVDRLRKEG 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 A L +P +K+ F G T A + + +P + KL ++GA++ G LNM Sbjct: 66 RALPPLAAVPYAVKNLFDVAGHATLAGASLFSDRQPAKQDGFAVNKLSESGALLSGMLNM 125 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D +A G + E ++YG +P R + + GGS+ +A + F S+GTDT GSI Sbjct: 126 DAYAYGFTTENTHYGATKNP-RDLQRIAGGSSGGSAAAVAAGLVNF----SLGTDTNGSI 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS G G+KPT+GR SR G F SLD G R+V D A++ + G D D+ Sbjct: 181 RVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARSVEDLAVVYDVLQGRDVQDSF 240 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + R L+ + G+ G+ Y + S + L E+ Sbjct: 241 QAEKAIHPAHRLLEHGLAGLRCGVLGGYFQTWCSEDARAAVAIAANALNAQD----EVLF 296 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A A +II+ +E ++ LR + + F + R++ Sbjct: 297 PEAELARTAAFIITASEGGNHYLP------ALRTQPER------------FEPLSRERLL 338 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-- 422 G + S + Y++A++ R K+ FEQ DV++ P TP++A +G+E + Sbjct: 339 AGAMIPS-----AWYVQAQRFRHHFKQQILPLFEQ-FDVLIAPATPSTATLIGQETMHIN 392 Query: 423 ------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 SMG + T ++ GLP +VP + +P+GLQLI PF+EE Sbjct: 393 GTDLPIRASMG-----MLTQPISFLGLPVTTVPLQ-TQGGLPIGLQLIAAPFKEEACLRA 446 Query: 477 GQIIEK 482 +EK Sbjct: 447 AWALEK 452 >gi|198414712|ref|XP_002129795.1| PREDICTED: similar to Glutamyl-tRNA(Gln) amidotransferase subunit A homolog (Glutaminyl-tRNA synthase-like protein 1) [Ciona intestinalis] Length = 237 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 20/229 (8%) Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 +SP + + W + ++AGA++V++SLPHT+Y++P Y ++ AE +SN+AR+DG+ +G Sbjct: 1 MSPEVIEAWNRTADIFENAGARVVQVSLPHTEYSIPCYQVLGAAEVASNMARFDGLEFGH 60 Query: 337 RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 RVEG +MY +RS GF + V RI+ G Y L Y+ +Y +A K+R LI DF Sbjct: 61 RVEGDYTEKMYARSRSEGFNETVAGRILAGNYFLLKSNYEKYYEKAMKVRRLITDDFLNI 120 Query: 397 F------------------EQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYNDVFTVA 437 F VD++LTP S PL E N S + +DV Sbjct: 121 FSTKENLRVGGRPQTMGMSNSSVDILLTPAM-VSPSPLYSEFNQRSNRHRTVEHDVCLQP 179 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 VN+AG+PAISVP L + +P+ +QLI F + TL S + +E+ + Sbjct: 180 VNLAGVPAISVPVNLSQNGLPISMQLISAHFNDSTLLSTAKFLEQSVSF 228 >gi|158335190|ref|YP_001516362.1| amidase [Acaryochloris marina MBIC11017] gi|158305431|gb|ABW27048.1| amidase [Acaryochloris marina MBIC11017] Length = 457 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 146/484 (30%), Positives = 229/484 (47%), Gaps = 46/484 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++ ++++ + SA +V++ + I +S N + ++ A A AE D+++ G Sbjct: 3 LTAAQITHQVKTGERSATSIVEAALTHI-SSREDHNCFTTLLESSALANAETLDRKLAAG 61 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNM 124 + L G+P +K+ F G T A S I P + +T +L GA+++G LNM Sbjct: 62 ETTGPLAGVPFAVKNLFDIAGTVTLAGSKINQSQPPATQDATAVARLKAAGAILVGALNM 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DE+A G +YG +P D T GSSGGS+AAVA L ++G+DT GSI Sbjct: 122 DEYAYGFVTINHHYGVTPNPH---DPTRMSG--GSSGGSAAAVAVGLVPLTLGSDTNGSI 176 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS G G KPTYGR SR G+ F+ SLD G R+V D A+ + + G D D Sbjct: 177 RVPASLCGVYGFKPTYGRLSRAGVYLFSSSLDHIGPFARSVEDIALAFEVLQGSDPRDPV 236 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 C + P A D+S G GI D+ + + T Q + + A ++L Sbjct: 237 CTDRP----PVAPDKS--GDMTGIRVAIATDHFARGMTSTVAQALDKVSSALQVTQTVTL 290 Query: 305 PHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P + + A Y+I+ +E S +L R TR F + R Sbjct: 291 PESARSRAAAYLITASEGSQLHLQRL-------------------QTRLQDFDPATRDRF 331 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL----GKE 419 + G + +S YL+A++ R + E F+ VD+I+ PTTP A PL E Sbjct: 332 VAGAMM-----PNSWYLQAQRFRRWYRDQVREIFKT-VDLIIAPTTPCPA-PLIDQTTME 384 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + +T ++ GLP +SVP L ++P+G+QLI +P+ E T+F Sbjct: 385 LDGQTVPIRPHLGFYTQPLSFIGLPVLSVPIFL-PGELPVGIQLIARPYDENTIFKAAVT 443 Query: 480 IEKE 483 +E + Sbjct: 444 LESQ 447 >gi|156392014|ref|XP_001635844.1| predicted protein [Nematostella vectensis] gi|156222942|gb|EDO43781.1| predicted protein [Nematostella vectensis] Length = 494 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 135/432 (31%), Positives = 210/432 (48%), Gaps = 46/432 (10%) Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ING A L G I IKD GI SH L G+ P ++TV ++ D G ++GK Sbjct: 86 INGAALGKLRGKRIVIKDNICVAGIPMSMGSHSLPGYVPDEDATVVTRVLDAGGTIVGKA 145 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +E ++ S+ T+ GPV++P + T GGS G A +A +IG D GG Sbjct: 146 VCEELSISGSSFTAATGPVMNPLDNRRET-----GGSFSGCGALLASGEVDMAIGGDQGG 200 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R P+S G VG+KPTYG G SLD G + R+V+D ++LL+ IAGYDE Sbjct: 201 SVRHPSSRCGLVGLKPTYGLVPYTGACPCEVSLDHLGPMARSVKDVSLLLEVIAGYDEGR 260 Query: 243 AT--CVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQG-ISWLKDAGAK 298 L + + L+ I G+ +G+ +E + +D+ ++ I + G + Sbjct: 261 DVRHWGELIISLFSLKLNGDISGIRIGLLREGFGHQNSEEDVDRIVKEASIRLAERTGHE 320 Query: 299 IVEISLP-HTQ-YALPA--YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 +V IS+P H Q + + A +Y S A SN G+R G N+ S Sbjct: 321 VVGISVPMHLQGFGMSAKGHYSTSLHHALSN-----GMRPG------------RNSLS-- 361 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 EVK +++G Y L D +Y +A+ + + RD+ +A + DV++ PT P A Sbjct: 362 --SEVKLGVLLGEY-LHESSRDVYYSKAQNLAMKLGRDYDDALTK-ADVLVMPTNPMKAR 417 Query: 415 PLGKEENNSGSM-----GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 L +E + + GH N T ++ G PA+S+ A L + +P+GL ++G+ + Sbjct: 418 LLPTKETSVKDLLGKYGGHYIN---TCPFDLTGHPALSINAGLSD-GLPVGLMIVGKKYD 473 Query: 470 EETLFSVGQIIE 481 EET+ V E Sbjct: 474 EETILRVAYAFE 485 >gi|111017381|ref|YP_700353.1| amidase [Rhodococcus jostii RHA1] gi|110816911|gb|ABG92195.1| amidase [Rhodococcus jostii RHA1] Length = 519 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 132/430 (30%), Positives = 204/430 (47%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S L+GF P ++TV +L D GA + GK ++ Sbjct: 87 LTGRRVAIKDNVTVAGVPMMNGSRSLEGFVPTRDATVVTRLLDAGATVAGKAVCEDLCFS 146 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW D+ G S G ++ AG + A IG D GGSIR PA+F Sbjct: 147 GSSFTPATGPVRNPW----DPDREAGGSSGGSAALVAAGDVDFA-IGGDQGGSIRIPAAF 201 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV-NLP 249 G VG KPT+G G ++D G ITRTV D+A+LL IAG D D NL Sbjct: 202 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVEDAALLLSVIAGRDGHDPRQPDNLV 261 Query: 250 VPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 V DY LD G+ VG+ + + P +D + +AG + E+S+P Sbjct: 262 VDDYVSTLDTGTDGLRVGVVSQGFGHANSQPEVDDAVRAAAHRFTEAGGVVDEVSIPWHL 321 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YGL +G +++ + R + + VK Sbjct: 322 HAFHVWNVIATDGGAYQM--LDGNGYGLNADGLYDPELMAYFAQHRIQHADALSETVKLV 379 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + + + A E DV++ PT P A L ++ + Sbjct: 380 ALCGHHGVTA-LGGSSYGKARNLVPRARAAYDAALEN-YDVLVMPTLPYVASELPAQDVD 437 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G PA+SVPA L +P+G+ +IG+ F + T+ G Sbjct: 438 RVTYVTKALGMIAN---TAPFDVTGHPALSVPAGLV-NGLPVGMMVIGKRFDDATVLRAG 493 Query: 478 QIIEKEAGYF 487 E+ G F Sbjct: 494 HAFEQIRGAF 503 >gi|72006767|ref|XP_782217.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115949680|ref|XP_001182986.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 470 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 132/432 (30%), Positives = 205/432 (47%), Gaps = 78/432 (18%) Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I D L G I IKD A + SH L+GF P Y++TV ++ D G V++GK Sbjct: 99 IRGADRGRLTGKRIAIKDSIAIACMPMMNGSHALEGFTPSYDATVVSRVLDAGGVIVGKT 158 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 ++ + + T+ GPV++P + S GGSS G++ +A ++G+D GG Sbjct: 159 VCEDMCFSACSSTAAQGPVLNPHDTTRSA-----GGSSSGNAVVLAIGEADMALGSDQGG 213 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD--- 239 S+R PAS+TG VG+KPTYG G I P++D G + RTV D A+LL+ IAGYD Sbjct: 214 SLRVPASWTGVVGLKPTYGLVPYTGAIEGDPAIDHIGPMARTVEDCALLLEVIAGYDRGF 273 Query: 240 ----ECDATCVNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D T VP Y + L SI+G+ +G+ +E G+ ++ Sbjct: 274 DPRQHPDTT-----VPQYTKQLVGASIKGLKIGLVEE--------------GFGMPGAEE 314 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK--DILEMYENTRS 352 A ++VE + P T AL L+V+ + L+M Sbjct: 315 AVNQLVETT-PKTYTAL-----------------------WLKVQALICNALQM------ 344 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +++ + LS + + R R + +++ + A E+ VDV+ PTTP Sbjct: 345 ----------VLMQSEYLSRNYKNQVHARGRNLVFGLRQAYDHALEK-VDVLALPTTPYR 393 Query: 413 AFPLG-KEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 L +++ S +G + T A N++G PA+SV A E +P+GL L+G+ F E Sbjct: 394 TDKLMYRDDTLSEFLGKCFGMTTNTAAFNLSGHPALSVNAGFLE-GLPVGLMLVGRHFDE 452 Query: 471 ETLFSVGQIIEK 482 T+F V Q +EK Sbjct: 453 LTIFKVAQAVEK 464 >gi|13475075|ref|NP_106640.1| putative amidase [Mesorhizobium loti MAFF303099] gi|14025827|dbj|BAB52426.1| Glu-tRNA amidotransferase, subunit A [Mesorhizobium loti MAFF303099] Length = 478 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 138/488 (28%), Positives = 231/488 (47%), Gaps = 34/488 (6%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L + E + + +S VE+VD + I+ +N +NA+ V Q+AR+AA S+ Sbjct: 9 TSLEGLTACECLKLYQRRQLSPVEVVDDCLSRIDANNPMLNAFCLVDHQRARSAARASEG 68 Query: 62 RIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVML 119 R + G+ A L+G+P+ IKD T+ T+ S P + + VT ++ + GAV+L Sbjct: 69 RWMKGEPAGVLDGVPVTIKDLTLTRDWPTRRGSLSSSAEGPWTDDAPVTARIREAGAVIL 128 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF ++ YG +PW + TPGGSSGG++ A A L G+D Sbjct: 129 GKTTTPEFGWKGVTDSPLYGITRNPWNP-----ELTPGGSSGGAAVAAALNLGFLHQGSD 183 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PASFTGT G KPT+G + + +L G +TRT D+ +++ IA D Sbjct: 184 GGGSIRIPASFTGTFGFKPTFGIVPQWPASAMT-TLSHLGPMTRTAADAILMMNVIARKD 242 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D P P E ++++G+ +G ++ ++ I++ + L+ A++ Sbjct: 243 ARDGYA-GPPYPGLEVNPAKTLKGLRIGYSRDLGYVKVAHDIERVTDIAVDQLRALEAEV 301 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 VE++ P + + A A+ L+R + + L G LE E +I + Sbjct: 302 VEVN-PGFANPVKIFETFWFAGAARILSRMNKKQRQLLDPG--FLEGAERGLTITLTEFQ 358 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + M + LS+ F + D ++TPT P + FP+G+ Sbjct: 359 EAEAM--RFELSA--------------------LMAKFHEDYDFLVTPTMPIAPFPVGRN 396 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + G + FT N+ PA S+P+ L ++ +P+GLQL+G + + T+ + Sbjct: 397 EPDDSFTGWVDWTPFTYPFNLTQQPAASLPSGLDDQGLPVGLQLVGARYSDTTVLAAAYA 456 Query: 480 IEKEAGYF 487 IE G+ Sbjct: 457 IESRLGHL 464 >gi|188534751|ref|YP_001908548.1| amidase [Erwinia tasmaniensis Et1/99] gi|188029793|emb|CAO97672.1| Amidase [Erwinia tasmaniensis Et1/99] Length = 465 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 146/490 (29%), Positives = 229/490 (46%), Gaps = 51/490 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++SE + L + ++SA E+ + AIE +N ++NA+ + + A+ D+R Sbjct: 3 LASLSISELKRALAAGELSAREIASQTLAAIEQANPRLNAWTGITEDRMLREADRLDERQ 62 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLG 120 G L +P +K+ F G T A + + RP +++ KL +G ++ G Sbjct: 63 RQGQPLPALAAVPYAVKNLFDVAGHSTLAGASLFSD-RPAAAHDAWAIDKLAASGGLLSG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 LNMD +A G + E S+YG +P T + GGSSGGS+AAVA L S+G+DT Sbjct: 122 MLNMDAYAYGFTTENSHYGATRNP----HDTARIA-GGSSGGSAAAVAAGLVHFSLGSDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G D Sbjct: 177 NGSIRVPASLCGIFGLKPTFGRLSRSGTHPFVASLDHIGPFARRVSDLAQVYDVLQGRDA 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ + V LD ++G+ G+ + + L DA +IV Sbjct: 237 SDSFQADKAVQPVTPLLDAGLEGLRCGVLGGWFQQWCDDDARAAVASAARAL-DACEEIV 295 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 LP + A A +II+ +E ++ E + E +E + Sbjct: 296 ---LPQAELARSAAFIITASEGGNHYL----------PELRHAAERFEPLS--------R 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + + + Y++A++ R ++ F+ VDV++ P TPTSA +G+E Sbjct: 335 ERLLAGAMIPA-----AWYVQAQRFRRHFQQQVLPLFKD-VDVLIAPATPTSATLIGQET 388 Query: 421 NN--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 SMG + T ++ GLP +VP MP+GLQLI PF+EE Sbjct: 389 MRINGCDLPVRASMG-----MLTQPISFLGLPVTTVPLR-TASGMPIGLQLIAAPFKEEA 442 Query: 473 LFSVGQIIEK 482 V ++E+ Sbjct: 443 CLRVAGVLEQ 452 >gi|118469908|ref|YP_886836.1| amidase [Mycobacterium smegmatis str. MC2 155] gi|118171195|gb|ABK72091.1| amidase family protein [Mycobacterium smegmatis str. MC2 155] Length = 467 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 145/468 (30%), Positives = 226/468 (48%), Gaps = 40/468 (8%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 R K++S VE + + AI++ + +NA++ V + A AAA+ES+ R +G+ +G+P Sbjct: 13 RRKEMSPVEATQAALDAIDSYDKSVNAFVLVDHEGALAAAKESEARWFSGEQLGPADGVP 72 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD T+G T S ++D P E + +L + GAV++GK E++ + Sbjct: 73 TSIKDALWTRGWPTLRGSTLIDEAGPWDEDAPSVARLREAGAVIIGKTTTPEYSWKGVTD 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + YG ++PW D+T T GGSSGGS+AAV + S+GTD GGS+R P FTGTV Sbjct: 133 SYRYGATVNPW---DTTK--TAGGSSGGSAAAVGLGMGPWSVGTDGGGSVRIPGGFTGTV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 +KPTYG + +F SL G +TR+VRD A LL I+ +D D T + P + Sbjct: 188 ALKPTYGLVPLYPMSAFG-SLAHVGPMTRSVRDCAALLDVISRFDGRDGTAMPTPTSSFL 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 LD + G+ V + P +D + + + AGA++ E+ P + Sbjct: 247 DGLDAGVAGLRVAYSPNLGYVHNDPEVDAAVRAAVDVIAAAGAEVEEVD--------PGF 298 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG---TYVLS 371 P EA L + G + LR G+G V R+ G T + Sbjct: 299 --ADPVEAFHVL-WFSGEAHVLR----------------GYGDAVDDRVDPGLRRTAAIG 339 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIY 430 + + YL A +R + F Q D++LTPT P AFP G++ + S Sbjct: 340 ATFSAADYLDATAVRMDLGLRMGR-FHQTYDLLLTPTLPLPAFPAGQDVPDGWHSPDWTS 398 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +T N++ PA++VP +P+GLQ++G + + VGQ Sbjct: 399 WTPYTYPFNLSQQPALTVPCGFTSAGLPIGLQVVGPRHSDSLVLRVGQ 446 >gi|163859212|ref|YP_001633510.1| glutamyl-tRNA amidotransferase [Bordetella petrii DSM 12804] gi|163262940|emb|CAP45243.1| glutamyl-tRNA amidotransferase [Bordetella petrii] Length = 442 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 47/419 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD G+ T S ++ V ++L GA+++GK N EFA G Sbjct: 66 LCGIPVAVKDLIDVAGMRTTMGSEQYAQNLATGDAEVVRRLRAQGAIVIGKANTHEFAYG 125 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + + SY+G V +P T SS GS+AA+ G LCA ++GTDT SIR PA+ Sbjct: 126 PTGDRSYFGAVCNPHNPAHMTGG-----SSSGSAAALGGGLCAGALGTDTSASIRLPAAL 180 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPTY R GI + + +LD G ++ TV D+A+LL + G +P Sbjct: 181 CGVVGMKPTYDLLPRDGIFALSHTLDHVGPMSVTVGDNALLLDVLTG----------MPR 230 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + R + Q I+G TVG+ + D+L + + ++ + + AGA++V + +P Q Sbjct: 231 DSHARLIGQPIRGRTVGLAMGFYNDFLDAPVRQALERARTVFEQAGARVVPVEIPRVQAI 290 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A ++ AEA Y D Y+ EV+ R++ G+ V Sbjct: 291 YDAQQLVLKAEA-----------YATHRRALDAGAPYQ--------AEVRTRLLTGSDVS 331 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + + YL+A ++ + ++ F E Q VDVIL PT +A P ++ S G Y Sbjct: 332 A-----ADYLQAMSMQAVARQSFDEVLAQ-VDVILCPTCGITAPP--RDTRASVLDGKDY 383 Query: 431 NDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 T N++G P++SVP + +P+G+QLIG E L+ GQ++E A Sbjct: 384 ATPWLLTRLTAPTNLSGHPSLSVPFGADAQGLPVGMQLIGPQLGEAGLYQFGQVLEAAA 442 >gi|332286343|ref|YP_004418254.1| glutamyl-tRNA amidotransferase [Pusillimonas sp. T7-7] gi|330430296|gb|AEC21630.1| glutamyl-tRNA amidotransferase [Pusillimonas sp. T7-7] Length = 529 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 129/452 (28%), Positives = 215/452 (47%), Gaps = 46/452 (10%) Query: 17 RSKDISAVELVDSYIQAIENSN--SQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R+ + ++ + +QA+ ++ +NA+I++ + + A ++ + + L G+ Sbjct: 89 RNAHLPDADVAGAALQALHTAHRHEHLNAFIQLATESSITAQADAAAAMKYRASLPLLGV 148 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD +G + D ++ +L + GA+ +G N+ E A G ++ Sbjct: 149 PVAVKDLMLVQGFPLTGGTQAPDNKPSATDALAVGRLREAGALFVGTTNLHELAYGITSN 208 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +YG V++P + PGGSSGGS+ +VA + ASIGTDT GSIR PA+ G V Sbjct: 209 NPHYGAVVNPHDA-----NVIPGGSSGGSAVSVAAGIVRASIGTDTSGSIRIPAACCGVV 263 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KP+Y R G + PSLD G ITR+V D+A+L +AG LP + Sbjct: 264 GFKPSYDAVPRQGALDLGPSLDHIGPITRSVDDAALLFSVMAG----------LPAQVPQ 313 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R S+ G+ +G+P + + L+P + Q + + D GA+++ I L A Sbjct: 314 RL--ASLAGVRIGVPANFFFEPLAPDVGAVVQTALELMADDGAQLIPIQLDGVDRAPAIQ 371 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + +EA+S + + +L ++ G +V+ R+ IG + + Sbjct: 372 FATLCSEATS-------------IHWRRLLAKPDS-----LGADVRVRLEIGQLLPA--- 410 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG---HIYN 431 Y RA+ R+ + F A GVDVI TPT T+A P+ G H Sbjct: 411 --IWYTRAQGARSRLAMVFDAALA-GVDVIATPTMRTTAPPVSASHVQIGQQSMPMHTAA 467 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 T+ N++GLPAI++P E +P+GLQL Sbjct: 468 TGLTLPFNLSGLPAITLPCGRGEHDLPVGLQL 499 >gi|197104619|ref|YP_002129996.1| amidase [Phenylobacterium zucineum HLK1] gi|196478039|gb|ACG77567.1| amidase [Phenylobacterium zucineum HLK1] Length = 425 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 124/419 (29%), Positives = 183/419 (43%), Gaps = 38/419 (9%) Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 DL+G IKD F G+ T + + P S ++L G +GK + E A Sbjct: 32 DLDGPTFAIKDLFDVAGVPTGGGAQVPLDPSPTRHSRAVERLLQAGWSAVGKTHTVELAY 91 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G G +PW D PGGSS GS+ AVA LC A++G+DTGGS+R PA+ Sbjct: 92 GGWGTNRAVG---APWNPWDPKVHRAPGGSSSGSAVAVAAGLCDAALGSDTGGSVRIPAA 148 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+KP G S G+ +P+LD G + R+V +A L AI+G D A V P Sbjct: 149 VCGVVGLKPGRGLVSLRGVHPLSPALDTVGTLARSVEMAARALAAISGPD--GAAAVREP 206 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT-- 307 D E AL ++G V L + P + + + + I L+ AG + + P Sbjct: 207 F-DSEAALSMDVRGRRVAAIPLDDLGEVHPDVGRLYLEAIERLRSAGVAVEMVRPPSALE 265 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 Q P +++ G R+ G+ I E + R G Sbjct: 266 QSFAPNGLLMA--------------GEGWRIWGERIQRHAEV-----MDPWIVRRFEAGR 306 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 V R D H RA A+ G D +L+PT P A P+ + + + Sbjct: 307 DVTDQRLEDVHRRRAEDQAAF------HAWIAGWDGLLSPTCPIPAPPIDEVDETVSPLS 360 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + T A N LP ISVP L + +P GLQ++G+P E ++ ++G E+ +G+ Sbjct: 361 RL-----TRAANYLDLPGISVPCGLTGEGLPAGLQILGRPRDEASVVALGAAFERVSGW 414 >gi|108803090|ref|YP_643027.1| amidase [Rubrobacter xylanophilus DSM 9941] gi|108764333|gb|ABG03215.1| Amidase [Rubrobacter xylanophilus DSM 9941] Length = 475 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 129/492 (26%), Positives = 230/492 (46%), Gaps = 41/492 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F+ E LR +++SA EL+++++ IE N ++NA + ++ ++A A +D Sbjct: 4 ELCFLPAVELAGLLRRRELSAAELMEAHLSQIERVNPEVNAIVTLLPERAMEEARRADAA 63 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L G+P+ KD F T+G+ T S I GF P ++ + ++ GA+ +GK Sbjct: 64 LARGEEVGPLHGLPVAHKDLFWTRGVRTTFGSPIFAGFVPDADALIVERARGAGAISVGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF GS +G ++P+ D++ T GGSSGG++ A+A + + G+D G Sbjct: 124 TNTPEFGAGSQTFNEVFGATLNPY---DTSR--TCGGSSGGAAVALACGMVPLADGSDMG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA+F +G++P+ GR S S++P L G + RT RD+A++L AIAG D Sbjct: 179 GSLRNPAAFCNVLGLRPSPGRVPSWPSQTSWSP-LSVDGPMARTARDAALMLSAIAGPDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 ++ P + L++ G+ V + + + + ++ + L+ G ++ Sbjct: 238 RSPISLSEPPGLFAAPLERDFSGVRVAWSPDLGTLPVEGRVAEVFRGSLPVLEGLGCEV- 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQE 358 EA+ +L+ D V R ++ E+ E R Q Sbjct: 297 -------------------EEAAPDLSGADEVFKAFRAWHFELAYGELLEEHR-----QR 332 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 +K ++ + R L A + R F + + ++ PTT + FP+ Sbjct: 333 MKDTVVWN--IEEGRRLTGPQLGAAERRRTELYHRVLGFMRRYEFLVLPTTQVAPFPVEM 390 Query: 419 E--ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G+ Y D ++ GLPA+SVP + +P+GLQ++G+P + + Sbjct: 391 PYVTEIEGARMETYIDWMRSCYYISAVGLPAVSVPCGFTGEGLPVGLQIVGRPRDDFGVL 450 Query: 475 SVGQIIEKEAGY 486 + E+ GY Sbjct: 451 QLAHAFEEATGY 462 >gi|225429238|ref|XP_002264191.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296088088|emb|CBI35447.3| unnamed protein product [Vitis vinifera] Length = 607 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 143/490 (29%), Positives = 228/490 (46%), Gaps = 53/490 (10%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-L 71 R RL + + A + S ++ N + A+ R A S +R G+ L Sbjct: 138 RSRLATPSMVAEHFI-SVMEEFRNKKPPAPLLVSFDAEDLRKQAAASTQRFQEGNPLSIL 196 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAMG 130 +GI + IKD ++ + + RP + V+ +L G + +GK NM E +G Sbjct: 197 DGIFVAIKDDIDCLPHPSKGATIWMHEVRPVEKDAVSVSRLRSCGVIFVGKANMHELGLG 256 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +S YG +P + +++T GGSS G +A VA LC+A++GTD GGS+R P+S Sbjct: 257 TSGNNPNYGTTRNP----HAPERYT-GGSSSGPAALVASGLCSAALGTDGGGSVRIPSSL 311 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+K TYGR S +G I + +++ G I V D ++ AI G D C P Sbjct: 312 CGVVGLKTTYGRTSMIGSICDSGTVEIIGPIASMVEDVMLVYAAILGSSPADRICSK-PA 370 Query: 251 PDYERALDQS-----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISL 304 P L S + + +G ++ D S I + ++ L K+ G K+ EI + Sbjct: 371 PPCLPNLSSSESLNVMGTLRLGKYTQWFNDVYSTDISDKCEDVLNMLSKNHGCKVTEIII 430 Query: 305 PHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P A+ + +E+ S+L YDG I +M +TR+ + Sbjct: 431 PELNEMRNAHIVSIGSESVSSLNPHCYDG----------KISKMTLDTRT--------NL 472 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PTSAFP 415 + T+ S Y+ A+ +R + E F + VD+I+TPTT SA Sbjct: 473 ALFRTFAASD------YVAAQCLRRRLMYYHMEIF-KNVDIIVTPTTGMTAPIISPSALK 525 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G E+N G++ F VA N+ GLPAISVP ++ +P+GLQLIG+P+ E ++ Sbjct: 526 FG--ESNLQVGGYLMR--FVVAANLLGLPAISVPVGYDKQGLPIGLQLIGRPWGEASILR 581 Query: 476 VGQIIEKEAG 485 + +E+ G Sbjct: 582 LASAVEELCG 591 >gi|115872988|ref|XP_784030.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115958631|ref|XP_001193154.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 538 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 132/421 (31%), Positives = 206/421 (48%), Gaps = 37/421 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD A G+ H L+GF P +++TV ++ D G + GK + + Sbjct: 140 LAGKRVAIKDNAAVAGVPMMNGCHALEGFTPDFDATVVTRILDEGGSIAGKTVCENLCLS 199 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T+ GPV++P T + + G SSG + +AG + A IG+D GGSIR PA++ Sbjct: 200 GSSYTAAKGPVMNP----HDTTRSSGGSSSGSAVVVLAGDVDMA-IGSDQGGSIRMPAAW 254 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--ATCVNL 248 TG VG+KPTYG G+ S PS D G + RTV D A LL+ IAGYD + C ++ Sbjct: 255 TGIVGLKPTYGLVPYTGVWSIEPSFDHIGPMARTVHDCAQLLEVIAGYDHGNDHRQCQHI 314 Query: 249 PVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKT----WQQGISWLKDAGAKIVEIS 303 VP+Y + L+ S+ G+ +G+ +E +P D + ++ L GA I IS Sbjct: 315 TVPEYIKELEGSSVSGIRIGLLEE---GLNNPKADSAVSGIVENLVNKLSMFGASIGRIS 371 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 +P + + + P S G +M++ +R +K + Sbjct: 372 VPLHLKGVGSGH---PGFYPSGFINESG-------------KMFK-SRPNDISDHMKLAL 414 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M Y L + Y R R + L++ + +A E+ VD+I PT P +A L +++ Sbjct: 415 MKAEY-LKKNYHGQVYGRGRNLTILLREAYEKALEE-VDIIAMPTIPFTATKLLSKDDPI 472 Query: 424 GSMGHIYN--DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +V T N+ G PA+SV A E +P+GL L+G+ E T+F V Q +E Sbjct: 473 CEYHRRASEVNVNTHPFNLTGHPALSVNAGFLE-GLPVGLMLVGRHNDELTIFKVAQAVE 531 Query: 482 K 482 K Sbjct: 532 K 532 >gi|121607354|ref|YP_995161.1| amidase [Verminephrobacter eiseniae EF01-2] gi|121551994|gb|ABM56143.1| Amidase [Verminephrobacter eiseniae EF01-2] Length = 793 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 115/428 (26%), Positives = 207/428 (48%), Gaps = 26/428 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD A G+ + L+G+ P +++TV Q++ D G ++GK + + F + Sbjct: 377 LKGRQVVLKDNIALAGVPMMNGASTLEGYVPAFDATVAQRVLDAGGTIIGKAHCEYFCLS 436 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T+ GPV +PWR GGSS G A V + +IG D GGSIR P++F Sbjct: 437 GGSHTNATGPVHNPWRM-----GTIAGGSSSGCGALVGSGEVSLAIGGDQGGSIRIPSAF 491 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G G+KPT+G G + ++D G IT V D+A+LL+ +AG D D + + Sbjct: 492 SGCCGMKPTHGLVPYTGAMPIESTIDHLGPITGNVADNALLLEVLAGEDGLDPRQYSPKL 551 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL ++G+ +GI +E + + +P + + L GA++ E+S+P Sbjct: 552 AQYTDALSMGVEGLRIGILREGFGMPGETPGLGAKVRAAADQLARLGARVREVSVPMHLD 611 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYE--NTRSIGFGQEVKHRIMIG 366 + I+ + + +G+ + R + +++ + TR+ +K + +G Sbjct: 612 GAAIWTPIALEGLQAQMMNGNGMGFNWRGLYDVGLMDRHAAWRTRADALSPSLKVSMFVG 671 Query: 367 TYVLSS---RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + + + R +R++R R F E VD++L PT P A + K + Sbjct: 672 EWFIRNHGGRFNAKAQNLSRQLRATYDRSFDE-----VDLLLMPTLPMIARQIPKPGS-- 724 Query: 424 GSMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + I F + N A G PA+S+P L + +P+G+QL+G+ + E T++ Sbjct: 725 -PIAEIIARAFEMLANTASFDATGHPAMSLPCGLLD-GLPVGVQLVGKHWDEFTIYRAAA 782 Query: 479 IIEKEAGY 486 +E+ A + Sbjct: 783 SLERAADW 790 >gi|83648379|ref|YP_436814.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A-like protein [Hahella chejuensis KCTC 2396] gi|83636422|gb|ABC32389.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Hahella chejuensis KCTC 2396] Length = 566 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 145/503 (28%), Positives = 238/503 (47%), Gaps = 55/503 (10%) Query: 9 VSESRDRL---RSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 ++ +RD + R + +++ I A++ S++ + A I Q A+ S +R Sbjct: 96 LTSARDLIQAYRKGQTTPLDVAQRVIAALQQSDASHPPLRAVIFSSEQDILIQAKASAQR 155 Query: 63 IINGDARDL-EGIPIGIKD-----CFATKG---IHTQACSHILDGFRPHYESTVTQKLWD 113 G L +G+P+ IKD +AT ++ Q CS D +T +L Sbjct: 156 YREGRPLSLLDGVPVAIKDELDAAPYATSVGTLVYGQDCSVDQD-------ATSVARLRA 208 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA+++GK NM E +G + ++G +P+ D + GGSS GS++AVA LC Sbjct: 209 AGAIIIGKANMHEIGLGVTGANVHHGHCRNPYH----LDHYA-GGSSSGSASAVAAGLCP 263 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 +IG D GGSIR PA+ G VG+KPT+GR S G S+ G + R V D A+ Sbjct: 264 IAIGADGGGSIRIPAALCGVVGLKPTWGRVSEHGAFPLCWSVAHVGPMGRCVDDVALAYS 323 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 AIAG D D ++ P P + + + + +GI + + + I ++ Q + LK Sbjct: 324 AIAGADLMDPFSIDQPPPHLSGYMKRDLSDLRIGIYSPW-FGHANREITQSCQLAVEKLK 382 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 GA++ EISL ++ I +E LA D E N ++ Sbjct: 383 SLGAQVQEISLEGLDLQRVSHAITIGSEM---LAAVDA-------------EYRRNPQNF 426 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G + L+ + + Y++A++ RT R+F Q VD+I+TPTT +A Sbjct: 427 GLDTRL-------NLALAQQFSSTDYIKAQRFRTQAMREFDNVL-QKVDIIVTPTTAMTA 478 Query: 414 FPLGKEENNSG-SMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + ++ SG S + ++ F + N+ GLPA+++P K +P+GLQL+G +RE Sbjct: 479 PRIRAQKEPSGESNLQVLTELMRFAFSANLTGLPALTLPVDYDAKGLPIGLQLMGGAWRE 538 Query: 471 ETLFSVGQIIEKEAGYFRPHKWW 493 TL VG+ +E RP ++ Sbjct: 539 HTLLRVGRALESLVELRRPALYF 561 >gi|310772422|dbj|BAJ23980.1| benzamide amidohydrolase [uncultured bacterium] Length = 499 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 134/435 (30%), Positives = 201/435 (46%), Gaps = 26/435 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I G A L G I +KD G+ + ILDGF P ++T+ ++ D GA + Sbjct: 77 KTSIKGAAEGKLAGKRIAVKDNVFVAGVPLNNGASILDGFVPDTDATIVTRMLDAGAEIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + +S+ T+ GPV +P T GGSS GS+A VAG + +IG D Sbjct: 137 GKSVCEYMCFSTSSATASTGPVENP-----RAPGHTTGGSSNGSAALVAGHVVDMAIGAD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GSIR P+SF G VG+K TYG G + SLD G +T TV D A LL+ IAG D Sbjct: 192 QAGSIRMPSSFCGLVGLKATYGLIPYTGCLGIEYSLDHVGPMTDTVEDCATLLEVIAGDD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAK 298 D + Y AL Q ++GM +G+ KE PT +D+ + L+D GA Sbjct: 252 GIDGRQKGVRTQAYTEALGQGVKGMRIGVVKE-GFGRPDPTGVDEAVRAAAKRLQDQGAI 310 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-----NTRSI 353 + EIS+P + I + NL G+ + V G L + Sbjct: 311 VEEISIPWHLTGAALWLPICIEGSYHNLYHAHGMGF-YGVNGAYSLAFMRAFAGWKSHLN 369 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 +K ++ G + +R Y +AR ++ ++ +A+ + DV++ PTTP +A Sbjct: 370 ELAPTIKGVLLTGE--IFARHQGRLYAKARNQVQRLRAEY-DAWLEKYDVLMMPTTPMTA 426 Query: 414 FPLGKEENNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 L ++ + S G I N T ++ G P+ISV E K P+G G+ F Sbjct: 427 TRLLPDDASPMDVLIASWGPINN---TCPFDITGHPSISVNCGTSEGK-PVGAMFTGKHF 482 Query: 469 REETLFSVGQIIEKE 483 + TL V ++ ++ Sbjct: 483 EDATLIRVADVVHQQ 497 >gi|112361268|gb|ABI15641.1| 3-indoleacetamide hydrolase [Agrobacterium rhizogenes] Length = 466 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 139/499 (27%), Positives = 217/499 (43%), Gaps = 54/499 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + +++E+ LR + S EL+++ I E + S +NA++E R A + D+ Sbjct: 2 VTLSSITETLKCLRERKYSCFELIETIIARCEAARS-LNAFLETDWAHLRWTASKIDQHG 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G P+ K AT A + L +P + V ++L GA+ N Sbjct: 61 GAGVGLAGV--PLCFKANIATGRFAATAGTPGLQNHKPKTPAGVARQLLAAGALPGASGN 118 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E + G ++ S G V +PW PGGSSGG +AAVAG L +GTDTG S Sbjct: 119 MHELSFGITSNNSATGAVRNPWNP-----SLIPGGSSGGVAAAVAGRLMLGGVGTDTGAS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA+ G VG +PT GR GI+ +P+ D G+I + V D ILL I Sbjct: 174 VRLPAALCGVVGFRPTVGRYPTDGIVPVSPTRDTPGVIAQNVPD-VILLDGI-------- 224 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 C PV R ++G+ +G+P Y + L P + + I L VE Sbjct: 225 ICGRPPVNQTVR-----LKGLRIGLPTAYFYNDLEPDVALAAETIIRVLARKDVTFVEAD 279 Query: 304 LPHTQY-----ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +P + + P P + + VEG E+ RS Sbjct: 280 IPDLAHHNEGVSFPTAIYEFPLSLEHYIQNF--------VEGVSFSEVVRAIRSPDVASI 331 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLG 417 + ++ S C + R R ++ + F+ +D IL PT P +A P+G Sbjct: 332 LNAQLSDNLISKSEYCLARRFFRPR-----LQAAYHSYFKAHQLDAILFPTAPLTAKPIG 386 Query: 418 KEEN--NSGSMGHIYNDVFTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + + ++GSM D F + V + AGLP +S+P +L +P+G+++ G Sbjct: 387 HDLSVIHNGSM----TDTFKIFVRNVDPSSNAGLPGLSLPVSLSSNGLPIGMEIDGSASS 442 Query: 470 EETLFSVGQIIEKEAGYFR 488 +E L ++G IE EA FR Sbjct: 443 DERLLAIGLAIE-EAIDFR 460 >gi|253689679|ref|YP_003018869.1| amidohydrolase, AtzE family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756257|gb|ACT14333.1| amidohydrolase, AtzE family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 468 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 145/497 (29%), Positives = 235/497 (47%), Gaps = 55/497 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ + + L++ SA EL + AIE +N +NAY V ++ A AE D R G Sbjct: 12 LSIRQIQQGLQAGTFSARELAQQTLDAIEQANPTINAYTNVTGERMLAEAECIDTRRQRG 71 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNM 124 + L G+P +K+ F G T A + I P + ++L + GA++ G LNM Sbjct: 72 ETLPPLAGVPYAVKNLFDVSGETTLAGAEIFSQRPPATQDAFAIRQLANQGALLSGMLNM 131 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D +A G + E S+YGP +P +D+ + GGSSGGS+AAVAG L ++G+DT GSI Sbjct: 132 DAYAYGFTTENSHYGPTRNP---LDT--QRIAGGSSGGSAAAVAGGLVNFTLGSDTNGSI 186 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P+S G G+KPT+GR SR G F SLD G + R D A++ + G D+ D Sbjct: 187 RVPSSLCGIFGMKPTFGRLSRHGSHPFVASLDHIGPLARRADDLALVFDTLQGRDKHDRF 246 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N L+ +G+ + LD Y S + + + A ++ Sbjct: 247 QANQEARHTSEQLEIGSEGLRYAV-----LDGYFSTWASEEANAAVRQIAQALGAQESLT 301 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKH 361 L A A +I+S +E G +Y LR T+S F + Sbjct: 302 LTDAALARSAAFILSASEG--------GNQYLPDLR------------TQSERFEPLSRE 341 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE- 420 R++ G + + + Y++A++ R ++ FE D+++ P TP SA +G+E Sbjct: 342 RLLAGAMIPA-----AWYVQAQRFRNYFRQQTLALFEH-TDLLIAPATPCSATLIGQETM 395 Query: 421 --NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 N++ SMG + T ++ GLP ++VP A +P+G+Q+I P+RE+ Sbjct: 396 RINDTDLPVRASMG-----MLTQPISFVGLPVVTVPVATA-NGLPIGVQIIAAPWREDLC 449 Query: 474 FSVGQIIEKEAGYFRPH 490 +E++ + H Sbjct: 450 LRTAWALEQQGITYTRH 466 >gi|330843249|ref|XP_003293572.1| hypothetical protein DICPUDRAFT_158444 [Dictyostelium purpureum] gi|325076094|gb|EGC29911.1| hypothetical protein DICPUDRAFT_158444 [Dictyostelium purpureum] Length = 655 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 136/492 (27%), Positives = 243/492 (49%), Gaps = 56/492 (11%) Query: 17 RSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 +S S ++++++I+ +S+ Q + A+I+V+ + A +S +R N + L+ Sbjct: 145 KSNKASPNDILNNFIEVKNHSDEQSPPLAAFIKVLESDIKEQANQSSERWKNKEPLSILD 204 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAVMLGKLNMDEFAM 129 G+PI IKD G HT + L P+ +S V +KL + GA+++GK NM E + Sbjct: 205 GVPISIKDELDQIGYHTTCGTTFLSKCYPNVKEEDSFVAKKLRERGAILVGKNNMHEIGI 264 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + +++G +P+ PGGSS GS+A+V+ L SIG D GGSIR PAS Sbjct: 265 STLGYNTHFGFTRNPYNI-----NHYPGGSSSGSAASVSSGLNPISIGCDGGGSIRVPAS 319 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV--- 246 G VGIKPT+ R S G+ S+ G I V D+A+ IAG D D V Sbjct: 320 LCGVVGIKPTFARVSHGGVFELCYSVGHIGPIGSCVVDTAVGYACIAGADPKDPQSVTAE 379 Query: 247 ------NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 LP+ E ++Q ++G+ +GI K++ D + ++T+ + I L++ GA+IV Sbjct: 380 QLGGKPTLPI-FTEIPMEQPLKGLKIGIFKDWINDCIEDIKEQTY-KCIDILREQGAEIV 437 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EI +P+ + + ++ +E +++ R+ +++ + L Sbjct: 438 EIEIPNLLVSRISQLVLILSEMKTSMKRFKNHNNEFQLDSRISLA--------------- 482 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-- 418 + G + Y+++ +IRT + + F VD I+TPT A + K Sbjct: 483 ---IAGMFTAED------YIQSNRIRTYCIEELKKIF-TNVDAIVTPTNGVVAPEIEKGV 532 Query: 419 ---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFREETLF 474 E N ++G + VF N++G+P IS+P + ++ +P+G Q++G+ + E+ LF Sbjct: 533 PQLGEVNIRAVGDLMKFVF--LGNISGIPGISIPIGVTKQNNLPIGFQIMGKWWEEDLLF 590 Query: 475 SVGQIIEKEAGY 486 + ++E+ + Sbjct: 591 YISFVLERNIKF 602 >gi|288935405|ref|YP_003439464.1| amidohydrolase, AtzE family [Klebsiella variicola At-22] gi|290509455|ref|ZP_06548826.1| aspartyl-tRNA/glutamyl-tRNA amidotransferase subunit A [Klebsiella sp. 1_1_55] gi|288890114|gb|ADC58432.1| amidohydrolase, AtzE family [Klebsiella variicola At-22] gi|289778849|gb|EFD86846.1| aspartyl-tRNA/glutamyl-tRNA amidotransferase subunit A [Klebsiella sp. 1_1_55] Length = 465 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 143/489 (29%), Positives = 217/489 (44%), Gaps = 51/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-R 62 L+ ++E + L ++SA E+ + I +N Q+NA+ EV AQ+ A A+ D R Sbjct: 3 LHHFTIAEIQRALHEGELSAREIARQTLDDIARANPQINAWTEVTAQRMLAEADSIDALR 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGK 121 L GIP +K+ F G T A + +L P +S ++L GA++ G Sbjct: 63 REKRPLPPLAGIPYAVKNLFDVAGHTTLAGAELLSDRPPATSDSWAVRQLHSAGALLSGM 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P + + GGS+ +A + F S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGATRNP-HDLSRIAGGSSGGSAAAVAAGLVHF----SLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + A+ G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDALQGRDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIV 300 D + L++ ++G+ RL Y + D + + + A Sbjct: 238 DDFQADKASERTGNLLERGLEGLRCA-----RLGGYFTTWCDDDARAAVDRVAHALGADS 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ A A +IIS +E + D+ E F + Sbjct: 293 ELQFADAALARSAAFIISASEGGNQYL-------------TDLRHSPER-----FEPHSR 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + S + YL+A++ R ++ F Q DV++ P TP SA P+G EE Sbjct: 335 ERLLAGAMIPS-----AWYLQAQRFRRHARQAMKSLFSQA-DVLIAPATPCSATPIGAEE 388 Query: 421 ---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N SMG + T ++ GLP ++VP K P+GLQLI PF E+ Sbjct: 389 MVINGQPLPVRASMG-----MLTQPISFLGLPVVTVPLRTASGK-PIGLQLIAAPFNEQA 442 Query: 473 LFSVGQIIE 481 + +E Sbjct: 443 CLRAARALE 451 >gi|55380171|ref|YP_138020.1| amidase [Haloarcula marismortui ATCC 43049] gi|55232896|gb|AAV48314.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Haloarcula marismortui ATCC 43049] Length = 519 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 216/433 (49%), Gaps = 31/433 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ IG+KD A G S +L+G+ P ++TV +L D GA + GKLNM+ FA Sbjct: 98 LSGMEIGLKDNIALAGYEMTCGSSVLEGYVPQIDATVATRLLDAGATLTGKLNMESFAWS 157 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S++TS +G V +P + + GGSS GS AA A C A++G D GGSIR P+++ Sbjct: 158 GSSDTSDFGTVETP-----HAEGYLTGGSSSGSGAAPAAGDCDAALGGDQGGSIRVPSAW 212 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG+KPT G GI D G +TV D+A +L+AIAG D D ++ Sbjct: 213 SGLVGLKPTTGLVPYTGIFPIDRGYDHTGPQAKTVEDAAAILEAIAGEDLHDGLKMDPRQ 272 Query: 251 P------DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P DY ALD+ ++ +++G+ +E + + +D + I L+ G + +S Sbjct: 273 PRGVEADDYTGALDEDLEDISIGVLEEGFGWESSDEEVDTAVRDAIEVLEGLGVETEPVS 332 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEM---YENTRSIGFGQ 357 + + +P + ++ + +L + +GV G +G D+LE + R+ F Sbjct: 333 VETHRLTVP-IWTVAATQGGISLLKDEGV--GTNYKGWYWDDLLEAFSKFREARAHEFPP 389 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 VK ++ ++ + Y +A+ + +R + E+ D ++ PTTP + Sbjct: 390 TVKTSLLADAHLQDEYSIEL-YAKAKNLALDAERKYNVHLEEH-DALVLPTTPMLPYERD 447 Query: 416 --LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L + E S ++G++ N T ++ PA++VP A + +P+G+ L+G E TL Sbjct: 448 DSLSRVERVSRTLGNLAN---TGMFDLTNHPALTVPCAKPD-GLPVGMMLVGSHLDERTL 503 Query: 474 FSVGQIIEKEAGY 486 F + E E + Sbjct: 504 FKIASSFEAEVDW 516 >gi|299136689|ref|ZP_07029872.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298601204|gb|EFI57359.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 469 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 136/494 (27%), Positives = 230/494 (46%), Gaps = 51/494 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + ++ + +R+++IS VE++ +++ IE N ++NA + +A A +A+E++ Sbjct: 3 TELIYTDATKLAELIRTREISPVEVMKTHLDRIEAVNPKVNAIV-TIADGALESAKEAEA 61 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ GD L G+P +KD T + TQ S I G P ++T ++ GA++L Sbjct: 62 AVLRGDELGPLHGVPFTVKDSIDTANVLTQRGSPIFKGRTPETDATSVVRMKKAGAILLA 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF+ ++ G +PW ++D TPGGSSGG SAA+A + +GTD Sbjct: 122 KTNLPEFSYWIESDNLLTGRTKNPW-NLD----LTPGGSSGGESAAIAAGMSPLGLGTDL 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYD 239 G S+R PA+ T V +K T+GR GI P G + R++RD ++ +AG D Sbjct: 177 GISLRGPAAHTAIVSLKATHGRVPMTGIWPREPRRFWHVGPMARSIRDLSLAFSQLAGPD 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + +P + + + VG E + T + LK G + Sbjct: 237 GQDGYSSSA-IPFDAGVGSSNKRPLRVGWLVEPGFGPIDRETASTVEAAAEALKGFGHTV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ- 357 +P + +GL V + +LEM G+ Sbjct: 296 ESARIPALER-----------------------DFGLDVFSRLHVLEMKPGFVKTTAGRS 332 Query: 358 --EVKH--RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 E+ + R M+G + Y+ A + +K + E F Q DV+LTP PT + Sbjct: 333 EDEISYMARFMLGL----PDTPAADYIDAVQGAERLKDGYAEYF-QKYDVLLTPVLPTPS 387 Query: 414 FPLGKEE-----NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 F G+EE G+MG I N T +N+ GLPA+S+ ++ MP+G+Q++G Sbjct: 388 FKHGQEELVINGQTIGAMG-IMN--ITSHLNVTGLPAVSMRFGTSQEGMPIGVQIVGSWQ 444 Query: 469 REETLFSVGQIIEK 482 E T+ + ++E+ Sbjct: 445 AESTILYIASLLEQ 458 >gi|153003380|ref|YP_001377705.1| amidase [Anaeromyxobacter sp. Fw109-5] gi|152026953|gb|ABS24721.1| Amidase [Anaeromyxobacter sp. Fw109-5] Length = 481 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 139/480 (28%), Positives = 226/480 (47%), Gaps = 36/480 (7%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F V RLR++++S VEL ++++ I+ ++ ++ V ++A A A ++ + Sbjct: 9 FSGVDALSQRLRARELSPVELTEAFLARIDAHAGRLGCFVTVTPERALAEARAAETELAA 68 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L G+P G+KD T GI T + P ++ + +L GAV+LGKL+M Sbjct: 69 GRWRGPLHGVPFGLKDLVDTAGIRTTFGAAPYADRVPTRDAAIVTRLAQAGAVLLGKLSM 128 Query: 125 DEFAMGSSNET---SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E A G T + GP +PW + SS G+ +AVA L A +IG++T Sbjct: 129 VELAGGLGYHTGAAALNGPCRTPWDLARWSGG-----SSSGAGSAVAAGLVAFAIGSETW 183 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P++F G G++PTYG R G ++ + ++D+ G + R+ RD A++L AIAG D Sbjct: 184 GSITCPSAFCGVTGLRPTYGVVPRHGAMALSYTMDKLGPMARSARDCALVLDAIAGPDAR 243 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + ++ P P R Q +G+ V + +P + + + L++AG + Sbjct: 244 DPSAIS-PPPGLARVRPQVARGLRVAVLGFPEKPEPAPGAREAFARAEEVLREAGGLLEP 302 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +LP Y A I EA A + +R G TR + + H Sbjct: 303 AALPELPYEPLANLFI---EAEVATACEELIRSG-------------RTRELA---DASH 343 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R L + + Y+RA ++R ++R F + D++L P P + P +EN Sbjct: 344 RAKRPEDYL-PKANAADYVRAMRVRGEVQRALAGFFTRH-DLVLAPNLPFT--PPRVDEN 399 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 D A N+AGLPA++VP +PL +QL+G P E L SV + + Sbjct: 400 FDALFAS--PDPLGAAGNVAGLPAVAVPMGF-SGGLPLSMQLVGPPLEEGRLLSVAALFQ 456 >gi|221053686|ref|XP_002258217.1| glutamyl-tRNA(Gln) amidotransferase subunit [Plasmodium knowlesi strain H] gi|193808050|emb|CAQ38754.1| glutamyl-tRNA(Gln) amidotransferase subunit,putative [Plasmodium knowlesi strain H] Length = 651 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 139/462 (30%), Positives = 215/462 (46%), Gaps = 69/462 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD TK I T S IL+ ++P Y+STV ++L +GAV++GK ++DEFAMG Sbjct: 179 LFGVPVILKDNICTKNIPTTCGSKILEKYKPSYDSTVVRRLKKHGAVIVGKTHLDEFAMG 238 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S V +P+ D + + GGS+ + + S+ TDTGGSIR PA+ Sbjct: 239 SCTGRG----VKNPFNENDLSCGGSSGGSASCVGSRIIN----CSVNTDTGGSIRTPAAL 290 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G+KPTYGR SR GII + D G+I V D +ILL ++G D+ D T + Sbjct: 291 CACIGMKPTYGRISRYGIIPYNEETDVVGLIINNVYDCSILLDVLSGGDKNDLTTLKGKE 350 Query: 251 PDYERALDQ---SIQGMTVGIP-KEYRLDYLSPTI-------DKTWQQGISWLKD---AG 296 ++ L++ S+ P K + YLS + D T++ + ++D G Sbjct: 351 KNFHSKLNKFEASVNFRENKSPLKNMKFGYLSENLLKNYFVDDLTYEGYLKVMQDIEQMG 410 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGF 355 ++ +L YY+ S A+SNL+R +G+ Y L V GK RS Sbjct: 411 GTLMNTNLYELSDYCYLYYMYSMTIANSNLSRINGINYNLHNVFGKS--NFVRQVRSNLI 468 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---QGVDVILTPTTPTS 412 ++V RI IG ++SSR + L R I +KR T A + + VD +L P+ P S Sbjct: 469 SEQVLTRI-IGGSIISSR-FQGESL--RHIFATVKRKLTAALDDIFRQVDFLLLPSLPRS 524 Query: 413 --------AFPLGKEEN-----------------NSGSMGHI------YND----VFTVA 437 + P G N S S+ I YN+ +F++ Sbjct: 525 NNLKESVGSTPHGGNPNVQRDTVHREKDYLISATTSHSLSGIPSCPEGYNNYMKEIFSIV 584 Query: 438 VNMAGLPAISVPAA--LCEKKMPLGLQLIGQPFREETLFSVG 477 ++ G P+I +P + P QL+ + E L +V Sbjct: 585 SSITGFPSIVIPTGEFTAQFNEPQSFQLLSRNLNEAGLLNVA 626 >gi|563984|dbj|BAA03744.1| amidase [Rhodococcus rhodochrous] Length = 515 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 131/437 (29%), Positives = 206/437 (47%), Gaps = 32/437 (7%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D L G + +KD A G+ S ++GF P Y++TV ++L D GA + GK ++ Sbjct: 84 DEGPLAGRTVAVKDNVAVAGVPMMNGSRTVEGFTPRYDATVVRRLLDAGATITGKAVCED 143 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 ++ TS+ PV +PW T SS GS A VA ++G D GGSIR Sbjct: 144 LCFSGASFTSHPQPVRNPWDESRITGG-----SSSGSGALVASGQVDMAVGGDQGGSIRI 198 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG KPT+G G ++D G +TRTV D+A +L +AG D D Sbjct: 199 PAAFCGIVGHKPTHGLVPYTGAFPIERTIDHLGPMTRTVSDAAAMLTVLAGTDGLDPRQT 258 Query: 247 NLPVP-DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + P DY AL + G+ VG+ E + +D + I L+ AG + E+S+ Sbjct: 259 HRIEPVDYLAALAEPASGLRVGVVTEGFDTPVSDAAVDNAVRTAIDVLRSAGLTVEEVSI 318 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRSIGFGQEVKH 361 P A+ + +I+ A+ + DG YG+ +G +++ + R + G ++ Sbjct: 319 PWHLDAMAVWNVIATEGAAYQM--LDGNAYGMNTDGFYDPELIAHFSRQR-LEHGHQLSK 375 Query: 362 RI----MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT-------TP 410 + M G Y S +Y AR++ ++ + A + DV++ PT P Sbjct: 376 TVKLVGMSGRYT-SEVGGGKYYAMARQLVPEVRAAYDAALAR-YDVLVMPTLPYTATKIP 433 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+ PL + + SM I N T ++ G PA SVPA L +P G+ +IG+ F + Sbjct: 434 TTDIPLADYLDTALSM--IIN---TAPFDVTGHPACSVPADLVH-GLPTGMMIIGKHFDD 487 Query: 471 ETLFSVGQIIEKEAGYF 487 T+ V Q+ E G + Sbjct: 488 ATVLRVAQLYEHAVGNY 504 >gi|21734947|gb|AAK11724.1| enantioselective amidase [Rhodococcus erythropolis] Length = 525 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 137/423 (32%), Positives = 214/423 (50%), Gaps = 23/423 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L + IKDC A G+ T S +L ++ V ++L GA ++GK N+++ AMG Sbjct: 97 LSDLTAAIKDCIAIAGMPTTNGSRMLPTVIATEDAVVVERLLAAGATIVGKTNLEDMAMG 156 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 E S YGP ++P + GGSS GS AAVA + ++G D GSIR PA++ Sbjct: 157 -IGEGSVYGPALNP-----NNPAHGTGGSSSGSGAAVAAGMVDFALGVDEAGSIRIPAAW 210 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV-NLP 249 G VG+K T+G G+ +LD G ITR V +A +L+ +AG D D V NLP Sbjct: 211 CGLVGMKATHGLVPSYGLTYMDHTLDHIGPITRGVELNARVLEVLAGADWRDPQWVRNLP 270 Query: 250 VPD-YERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P+ Y AL + + G+ + +E + +P + + QG++ L+ AGA I +S+P Sbjct: 271 EPENYGSALGEGVSGLRFAVVEESLEPNGATPDVIAAFNQGLAALESAGATIERVSVPLW 330 Query: 308 QYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A P + A + +A GV Y RV+ + +R+ + R+M+ Sbjct: 331 TAAWPIQSGVMAFNARA-MADSAGVGYFHKGRVDVSTAVTTAAQSRTTHKDLAILSRLML 389 Query: 366 GTYVLSSRCYDS----HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL--GKE 419 V++ D HY +A+ +R + + +A Q +LTPTTPT A L G++ Sbjct: 390 ---VIAEHLRDEYLGIHYAKAQNLRLELGKQI-DAVLQDRAALLTPTTPTVANELLSGRQ 445 Query: 420 ENNSGSMGHIYNDVF-TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + S N + T +++ G PA++VP EK +P+GLQ+IG+ F E TL+ G Sbjct: 446 DTMSMIPRMTGNAILNTCPLDLTGHPALTVPTGAGEKGLPVGLQVIGRHFEESTLYRTGA 505 Query: 479 IIE 481 +IE Sbjct: 506 VIE 508 >gi|220919148|ref|YP_002494452.1| Amidase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957002|gb|ACL67386.1| Amidase [Anaeromyxobacter dehalogenans 2CP-1] Length = 491 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 140/493 (28%), Positives = 240/493 (48%), Gaps = 50/493 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F V+ R++++++S VEL ++Y+ I+ + ++ V +A A A ++ Sbjct: 6 DVLFSGVAALSRRIQARELSPVELAEAYLARIDALGPALGCFVTVTRDRALADARAAEAD 65 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ G R L G+P G+KD T GI T + P ++TV ++L + G V+LGK Sbjct: 66 LVAGRWRGPLHGVPYGLKDLVDTAGIRTTFGARPYADRAPERDATVARRLAEAGGVLLGK 125 Query: 122 LNMDEFAMG---SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 L+M E A G + E + GP +PW D T GSS G+ AAVA L +IG+ Sbjct: 126 LSMIELAGGLGYHTGEAALNGPCRTPW---DPTRWAG--GSSSGAGAAVAAGLVPFAIGS 180 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI PA+F G G++PTYG SR G ++ + +LD+ G + RT D A++L ++G Sbjct: 181 ETWGSITCPAAFCGVTGLRPTYGVLSRAGAMALSYTLDKLGPMARTAEDCALVLGVLSGV 240 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--------SPTIDKTWQQGIS 290 D D T + P P + ++G GIP+ R+ L +P ++ + Sbjct: 241 DPRDPTSIA-PPPGLG---NGKVRG---GIPRGLRVAVLGFPEKPAVAPGARAAYEAAQA 293 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+DAGA + +LP Y A + I A++ +R G +++ + T Sbjct: 294 VLRDAGAILTPAALPDLPYEPLASFFIEAEAATAFEEL---IRSG---RTRELADRSHAT 347 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R Y+ + S Y+RA ++R ++R F + D++L P P Sbjct: 348 RK------------PDDYL--PKGNPSDYVRAMRVRGEVQRALAGFFAR-YDLVLAPNLP 392 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +P + N +M + D+ A N+AGLPA+++P L + +P+ +QL+G P E Sbjct: 393 ---YPPPRVTENFDAM-FAFPDLLGAAGNLAGLPAVALPMGLVD-GLPVSMQLVGAPLEE 447 Query: 471 ETLFSVGQIIEKE 483 + + + + Sbjct: 448 ARVLAAAAVFQSR 460 >gi|116626200|ref|YP_828356.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116229362|gb|ABJ88071.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 473 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 140/496 (28%), Positives = 225/496 (45%), Gaps = 39/496 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F + E +RL+SK+ +A +L ++ ++ + NA + Q+A A+ D Sbjct: 7 DVYFATIPELNERLKSKEFTAEQLARAFSARLQELGPRYNALALSLNQEALRQAKAVDNE 66 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + R L+GIP G+KD A G T + G Y + V K+ G V+ GK Sbjct: 67 LKRDRFRGPLQGIPYGVKDLLAYAGQPTTWGAKPYAGQVFDYNAAVIDKISALGGVLTGK 126 Query: 122 LNMDEFAMGSS---NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 L M E A G S GP ++PW D T GSS GS+AAVA L +IG+ Sbjct: 127 LAMVELAGGGGYRFASASLTGPGLNPW---DRTRWSG--GSSSGSAAAVAAGLVPYAIGS 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI PASF G ++PTYG SR G ++ + +LD+ G T D ++L+AIAG Sbjct: 182 ETSGSIVTPASFCGVTALRPTYGLVSRYGAMALSWTLDKLGPFAHTAEDCGLILQAIAGK 241 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D Y ++ + VG ++ P + + LK +G + Sbjct: 242 DSRDPGSAGKSF-YYTPQYAHPMKDLKVGYAPSDFSEWAEPAARPAFDAALGVLKASGVQ 300 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VE LP Y I++ ++ ++E + G E Sbjct: 301 LVETRLPDFPYGAALSTILN----------------------GEMGSIFEPLIASGKVDE 338 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + + I S YL+A ++R +I+ + ++ F +DV+L P P A + Sbjct: 339 LADKPQIAGLKASLELPAKDYLKAMRMRRMIQDEVSKLFGS-IDVLLAPGRPGIASKI-D 396 Query: 419 EENNSGSMGHIYNDVFTVAV----NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + + G+ G D A+ N+AGLPA+ +P E MP+ LQ++G PF E TL Sbjct: 397 QPLDRGAGGAPPKDPGFRAIIQMGNLAGLPALVLPCGFAE-NMPVALQVVGVPFSENTLL 455 Query: 475 SVGQIIEKEAGYFRPH 490 ++G+ +K + + H Sbjct: 456 AIGREFQKRTDWHKRH 471 >gi|221632207|ref|YP_002521428.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermomicrobium roseum DSM 5159] gi|221155734|gb|ACM04861.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermomicrobium roseum DSM 5159] Length = 475 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 136/474 (28%), Positives = 228/474 (48%), Gaps = 47/474 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL F++ +E D R + +S VE+VD+ + IE + ++A++ V A++AR A E++ Sbjct: 6 SELCFLSATELLDHYRRRALSPVEVVDAVLTQIERLDPHLHAFLTVTAEEARRQALEAEY 65 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +G+ R L G+P+ IKD G+ + S + ++ V ++L GA++LGK Sbjct: 66 AYAHGEHRPLLGVPVSIKDVTPVAGVRWTSGSLLWKDRVATEDAPVVERLRAAGAIILGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N E + GP +PW+ +D T + GG++ +A + + GTD Sbjct: 126 TNTPELGWKGDSGNRLIGPTSNPWK-LDRTAGGSSGGAAAAVAAGMGPL----AQGTDGA 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIAG 237 GSIR PASF G VG KP++GR + + PS L G +TRTV D+A++L +AG Sbjct: 181 GSIRIPASFCGIVGFKPSFGR-----VPYYPPSAVELLAHVGPMTRTVADAALMLSVMAG 235 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + L D E AL++ + G V + P + ++ ++ +D G Sbjct: 236 PDPRDRHSLPLECSDGE-ALERDLAGARVAWLGRVGDVPVDPEVAAIARRAVAVFEDLGC 294 Query: 298 KIVEISLPHTQYALPAYYII-SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + E+ P + P I+ S A A+ + D VR D+L+ Sbjct: 295 SVEELVEP-LEDPYPVLDILWSVAMAAVHRDDLDAVR--------DLLD----------- 334 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK-RDFTEAFEQGVDVILTPTTPTSAFP 415 R+ + + L R D + A + R + + R E F D +++PTTP +AF Sbjct: 335 ---PGRLTVIEHGLRWRGVDVGWALAERNRYVDRLRQRLERF----DFVVSPTTPVTAFA 387 Query: 416 LGKEENNSGS---MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 G + + ++ FT N++G PAISVP ++ +P+GLQ++G+ Sbjct: 388 AGADHPGQIAGYPTTYLSWTPFTYPFNISGQPAISVPCGWTQEGLPVGLQIVGR 441 >gi|218295986|ref|ZP_03496766.1| Amidase [Thermus aquaticus Y51MC23] gi|218243724|gb|EED10252.1| Amidase [Thermus aquaticus Y51MC23] Length = 434 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 147/482 (30%), Positives = 241/482 (50%), Gaps = 59/482 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNS--QMNAYIEVVAQKARAAAEESDKRII 64 M + E++ L + + + L++ +A+E + + NA + ++AR A + + Sbjct: 1 MDLLEAKHLLETGKTTPLALLE---EALERAKAYADRNALAYLDEERAREEALRLTEELK 57 Query: 65 NGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G R L G+P+ +KD F KG+ T+A + P E+ +L + GA++ K N Sbjct: 58 RGQTRGPLHGLPLTVKDLFPVKGMPTRAGTRAPLPPLPE-EALAVGRLKEAGALIFAKTN 116 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E A+G + E + GPV + ++D T + GGSSGGS+ AVA + AS+G+DTGGS Sbjct: 117 MHEVALGITGENPWTGPVRN---AVDPTRQA--GGSSGGSAVAVALGIGLASLGSDTGGS 171 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA+F G VG KP+YGR S G + + S D G + +TVRD+ L + +AG Sbjct: 172 IRIPAAFNGVVGFKPSYGRVSLEGALPLSRSTDHGGPLAKTVRDAHFLTEILAGE----- 226 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 ++P+ + Q T G+P ++ L + K + + + L A + E+S Sbjct: 227 ---SIPL--------EGPQNPTFGVPLDFLEGRLGVGVRKAFTRLLEDLPGLRATVKEVS 275 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP L Y E + L RY+ R+ K + E E GF +V+ + Sbjct: 276 LP-----LKGAY-----EVYTRLVRYEAA----RIHEKALKEHPE-----GFSPQVREAL 316 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G LS + Y A R +++ +A +GVD +L P P A PLG EE Sbjct: 317 LAG-LALSEKDYRD----AVAEREVLRLKLVKAL-RGVDALLLPAQPLPAPPLGTEEVEL 370 Query: 424 GSMGHIYNDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE-TLFSVGQI 479 S + + F T+ ++ G+PA+++P A E MP+GLQ++G P+ E+ + ++G Sbjct: 371 ESGRKSHREAFITLTLPFSLLGVPALALPFAKVE-GMPVGLQVVG-PYAEDGRVLAIGGW 428 Query: 480 IE 481 +E Sbjct: 429 LE 430 >gi|163793727|ref|ZP_02187701.1| glutamyl-tRNA(Gln) amidotransferase subunit A [alpha proteobacterium BAL199] gi|159180838|gb|EDP65355.1| glutamyl-tRNA(Gln) amidotransferase subunit A [alpha proteobacterium BAL199] Length = 526 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 150/480 (31%), Positives = 232/480 (48%), Gaps = 58/480 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 +++ LV+S ++ IE +S + A++ V A+ ARA A+ +D I +G +R L G+P G+K Sbjct: 21 LTSRTLVESCLERIERLDSTLRAWVVVNAEGARAQADRADAEIGDGHSRGPLHGVPYGLK 80 Query: 80 DCFATKGIHTQACSH--ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN--ET 135 D T + T+A S I DG E+TV ++L D GA++LGKLN EF G+ + Sbjct: 81 DILRTAEMPTRANSRLPIDDG----PEATVHRRLRDAGAILLGKLNTYEFGTGTGAVYDD 136 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 P +PW + D FT GGSS G+ AAVA + +IGTDTGGS+R PA+ G VG Sbjct: 137 LPMAPARNPW----NPDHFT-GGSSTGAGAAVAARMAPFAIGTDTGGSVRLPAAACGLVG 191 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVNLPVPD 252 +KPTYG R G++ PS D G + RT D+ ++L+AIAG+D D AT + Sbjct: 192 LKPTYGLVPRTGMLPNCPSQDHIGPLARTAEDAGLVLQAIAGFDPADPGSATAIFT---- 247 Query: 253 YERALDQSI---QGMTVGI--PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 A QSI G+TV + P P + +++++ ++ L GA++VE LP++ Sbjct: 248 ---ASAQSIGSPAGLTVAVVRPSHDSDPAADPAVAESFERTVATLARLGARVVERILPYS 304 Query: 308 QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 A II+ E+ + I + + G ++ ++ Sbjct: 305 ARDFRACGRIINACESFA------------------IHRRWLDDPKAPIGSALRDKLEAA 346 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 V + + YL A + R + +A G D +L T T+A L E Sbjct: 347 AGVSA-----ADYLDALRWRRTLSAAVVDAM-AGCDALLCLGTATTAPRLDDERGCIRFT 400 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 G F+ ++GLPA+ +P L +PL +QL F E L + +E G Sbjct: 401 GDSTMGPFS----LSGLPALCLPTGLNPDGLPLNVQLAAPAFGEGVLIRIASALEPLVGL 456 >gi|32455885|ref|NP_862538.1| biuret hydrolase [Pseudomonas sp. ADP] gi|13937521|gb|AAK50332.1|U66917_101 biuret hydrolase [Pseudomonas sp. ADP] Length = 457 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 136/481 (28%), Positives = 213/481 (44%), Gaps = 39/481 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E + + S SA ++ + + I ++ +NA+ ++ARA A+ D R G Sbjct: 1 MKTVEIIEGIASGRTSARDVCEEALATIGATDGLINAFTCRTVERARAEADAIDVRRARG 60 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 + L G+P +K+ F +G+ T A S I P ++ + Q+L GAV+LG LNM Sbjct: 61 EVLPPLAGLPYAVKNLFDIEGVTTLAGSKINRTLPPARADAVLVQRLKAAGAVLLGGLNM 120 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA G + E ++YGP +P + + G + ++ V S+G+DT GSI Sbjct: 121 DEFAYGFTTENTHYGPTRNPHDTGRIAGGSSGGSGAAIAAGQV-----PLSLGSDTNGSI 175 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS G G+KPT+GR SR G F S+D G + +V A+ A+ G D D Sbjct: 176 RVPASLCGVWGLKPTFGRLSRRGTYPFVHSIDHLGPLADSVEGLALAYDAMQGPDPLDPG 235 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 C + L Q I G+ +G+ + D P L GA V + Sbjct: 236 CSASRIQPSVPVLSQGIAGLRIGVLGGWFRDNAGPAARAAVDVAALTL---GASEV-VMW 291 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A ++I+ +E L D LR+ +D + + G Q V Sbjct: 292 PDAEIGRAAAFVITASEGGC-LHLDD-----LRIRPQDFEPLSVDRFISGVLQPV----- 340 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + YLRA++ R + RD A + D+++ P TP SA +G E Sbjct: 341 ------------AWYLRAQRFRR-VYRDKVNALFRDWDILIAPATPISAPAIGTEWIEVN 387 Query: 425 SMGHIYND---VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQII 480 H + T V+ AG P ++ P E MP+G+QLI P+ E G+++ Sbjct: 388 GTRHPCRPAMGLLTQPVSFAGCPVVAAPTWPGENDGMPIGVQLIAAPWNESLCLRAGKVL 447 Query: 481 E 481 + Sbjct: 448 Q 448 >gi|206579945|ref|YP_002238431.1| amidohydrolase, AtzE family [Klebsiella pneumoniae 342] gi|206569003|gb|ACI10779.1| amidohydrolase, AtzE family [Klebsiella pneumoniae 342] Length = 465 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 143/489 (29%), Positives = 216/489 (44%), Gaps = 51/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-R 62 L+ ++E + L ++SA E+ + I N Q+NA+ EV AQ+ A A+ D R Sbjct: 3 LHHFTIAEIQRALHEGELSAREIARQTLDDIARVNPQINAWTEVTAQRMLAEADSIDALR 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGK 121 L GIP +K+ F G T A + +L P +S ++L GA++ G Sbjct: 63 REKRPLPPLAGIPYAVKNLFDVAGHTTLAGAELLSDRPPATSDSWAVRQLHSAGALLSGM 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P + + GGS+ +A + F S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGATRNP-HDLSRIAGGSSGGSAAAVAAGLVHF----SLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + A+ G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDALQGRDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIV 300 D + L++ ++G+ RL Y + D + + + A Sbjct: 238 DDFQADKASERTGNLLERGLEGLRCA-----RLGGYFTTWCDDDARAAVDRVAHALGADS 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ A A +IIS +E + D+ E F + Sbjct: 293 ELQFADAALARSAAFIISASEGGNQYL-------------TDLRHSPER-----FEPHSR 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + S + YL+A++ R ++ F Q DV++ P TP SA P+G EE Sbjct: 335 ERLLAGAMIPS-----AWYLQAQRFRRHARQAMKSLFSQA-DVLIAPATPCSATPIGAEE 388 Query: 421 ---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N SMG + T ++ GLP ++VP K P+GLQLI PF E+ Sbjct: 389 MVINGQPLPVRASMG-----MLTQPISFLGLPVVTVPLRTASGK-PIGLQLIAAPFNEQA 442 Query: 473 LFSVGQIIE 481 + +E Sbjct: 443 CLRAARALE 451 >gi|330010556|ref|ZP_08306789.1| amidohydrolase, AtzE family [Klebsiella sp. MS 92-3] gi|328534493|gb|EGF61081.1| amidohydrolase, AtzE family [Klebsiella sp. MS 92-3] Length = 465 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 143/489 (29%), Positives = 217/489 (44%), Gaps = 51/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-R 62 L+ ++E + L ++SA E+ + I N Q+NA+ EV AQ+ A A+ D R Sbjct: 3 LHHFTIAEIQRALHEGELSAREIARQTLDDIARVNPQINAWTEVTAQRMLAEADSIDALR 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGK 121 L GIP +K+ F G T A + +L P +S ++L GA++ G Sbjct: 63 REKRPLPPLAGIPYAVKNLFDVAGHTTLAGAELLSDRPPAASDSWAVRQLHSAGALLSGM 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P + + GGS+ +A + F S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGATRNP-HDLSRIAGGSSGGSAAAVAAGLVHF----SLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + A+ G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDALQGRDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIV 300 D + L++ ++G+ RL Y + D + + + A + Sbjct: 238 DDFQADKASERTGNLLERGLEGLRCA-----RLGGYFTTWCDDDARAAVDRVAHALSADS 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ A A +IIS +E + D+ E F + Sbjct: 293 ELQFADAALARSAAFIISASEGGNQYL-------------ADLRHSPER-----FEPHSR 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + S + YL+A++ R ++ F Q DV++ P TP SA P+G EE Sbjct: 335 ERLLAGAMIPS-----AWYLQAQRFRRHARQAIKSLFSQA-DVLIAPATPCSATPIGAEE 388 Query: 421 ---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N SMG + T ++ GLP ++VP K P+GLQLI PF E+ Sbjct: 389 IVINGQPLPVRASMG-----MLTQPISFLGLPVVTVPLRTASGK-PIGLQLIAAPFNEQA 442 Query: 473 LFSVGQIIE 481 + +E Sbjct: 443 CLRAARALE 451 >gi|255029441|ref|ZP_05301392.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Listeria monocytogenes LO28] Length = 169 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/168 (48%), Positives = 111/168 (66%), Gaps = 5/168 (2%) Query: 322 ASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 ASSNL+R+DGVRYG R LE +Y TRS GFG EVK RIM+GTY LSS YD++Y Sbjct: 1 ASSNLSRFDGVRYGYRSPNATTLEELYTKTRSEGFGDEVKRRIMLGTYALSSGYYDAYYK 60 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 +A++ RTLIK+DF FE DVI+ P++PT+AF + N+ +M ND+ TV +N+ Sbjct: 61 KAQQARTLIKQDFINVFEN-YDVIIGPSSPTTAFKIDGMINDPITMYS--NDILTVPINL 117 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 AG+PAISVP + +P+GLQ+IG F E L+ V E+E + + Sbjct: 118 AGVPAISVPCGFSD-GLPVGLQIIGNYFEESLLYKVAHAFEQETTFHK 164 >gi|45368573|ref|NP_990901.1| indole acetimide hydrolase [Achromobacter denitrificans] gi|15026867|gb|AAK81676.1| indole acetamide hydrolase [Burkholderia cepacia] gi|44937742|gb|AAS49442.1| IaaH [Achromobacter denitrificans] Length = 473 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 134/488 (27%), Positives = 220/488 (45%), Gaps = 54/488 (11%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V+ R+ L S S VE + I A + + +N Y++ A A ++D I G + Sbjct: 8 VASLRNALLSGATSCVEHATALI-ARTQALAHLNGYVDFDPVPFLAQARQADVDIARGVS 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ +KD T G T + L G P ++ + ++L +GA++ GK M E A Sbjct: 67 APLLGVPLALKDNINTTGFPTGVGTRTLRGRIPAADAEIVKRLKQSGAIISGKAGMHELA 126 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G S+ G + +PW + D+ PGGSSGGS+ VA L +IGTDTG S+R PA Sbjct: 127 FGISSNNGVTGAIRNPW----ALDRI-PGGSSGGSAVVVAAGLVPGAIGTDTGASVRLPA 181 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G++PT GR GI + + D AG + R++ D A+L A+ G D V+L Sbjct: 182 ALCGIAGLRPTVGRVPGTGIAPISSTRDTAGPMARSIADLALLDTALTG-DAAGLAKVDL 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +G+ +GIP + L ++ L+ AG VE+ LP Sbjct: 241 -------------RGLRLGIPNDRFWTPLDASVAAVMDDTRKELQRAGVDFVELDLPGL- 286 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-----GFGQ-EVKH- 361 +A +N + + E D L+ + I G G +V Sbjct: 287 ------------DALNNSVGFPVGLFEFMAEMPDYLKASGHPLDIEALLAGIGSPDVAGI 334 Query: 362 -RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R ++G+ + Y + ++++ L +R F + V + PT+ +A PLG ++ Sbjct: 335 LRPLLGSGAIPEPVYRAALADRQRLQELYRRTFA---QHQVRALAFPTSALTARPLGTDD 391 Query: 421 N-------NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 M +I N T + AG+P +S+PA + +P+GL+L G + L Sbjct: 392 TVEFLGQRCPAFMIYIRN---TDPGSNAGIPGLSLPAGIGPDGLPVGLELDGPAGSDRDL 448 Query: 474 FSVGQIIE 481 ++G +E Sbjct: 449 LAIGAALE 456 >gi|227818811|ref|YP_002822782.1| Indoleacetamide hydrolase [Sinorhizobium fredii NGR234] gi|36959066|gb|AAQ87491.1| Indoleacetamide hydrolase [Sinorhizobium fredii NGR234] gi|227337810|gb|ACP22029.1| Indoleacetamide hydrolase [Sinorhizobium fredii NGR234] Length = 486 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 150/511 (29%), Positives = 239/511 (46%), Gaps = 78/511 (15%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESD 60 L + V+ + +R+ DIS+ +SY A+ ++S +NA+I + A AAA +D Sbjct: 19 LTGLGVAAAAAAIRNGDISS----ESYTAALLQRARTHSDLNAFITIDETAALAAARNAD 74 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K G L G+P+ +KD + TKG+ T L+GF P ++ V + D G V+ G Sbjct: 75 KARAAGSNASLLGVPLAVKDSYLTKGLRTTLGVRNLEGFVPEEDAVVVGAIKDAGGVVFG 134 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E + G + YG V +P T SS G A+VA + A++G DT Sbjct: 135 KNNLVEMSYGLTGNNEPYGQVKNPHERNHVTGG-----SSSGGGASVAARIVPAALGGDT 189 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR PAS G VG KPT GR G+ + +LD G++ R V D A++ + + + Sbjct: 190 VGSIRVPASLCGVVGFKPTTGRWPGNGVAPISHTLDTTGVLARNVEDCALIDQIVT---K 246 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 +AT R+ ++G+ + P++Y LD + P I+ + + + L++ GA+I Sbjct: 247 AEATG---------RSDRSDLKGVRLAYAPRQY-LDLVDPEIEVHFNETVRRLRETGAEI 296 Query: 300 VEISLPH-----TQYALPAYYIISPAEASSNL-----------ARYDGVRYGLRVEGKDI 343 V I L T+ A + EA S A YDG++ GLR Sbjct: 297 VAIDLGEDFSSITERATWNIFFHETMEAISGFLHHNRVPTSFDAIYDGLKPGLR------ 350 Query: 344 LEMYENT---RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQ 399 E + N G+ +E Y A + R I+R F+EAF + Sbjct: 351 -EAWGNVVLPSGPGYSRET-------------------YEAALSLDRPEIQRRFSEAFTR 390 Query: 400 -GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCE 454 G +L PTTP +A PL + ++ +D+ T+A + AGLP IS+P L Sbjct: 391 SGAVALLFPTTPCTA-PLIEHQSRFSIADQEVSDLVLAKNTIAASAAGLPGISIPTGLSR 449 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +P+GL++ G R+ +L + +++E G Sbjct: 450 NGLPIGLEIDGAHGRDRSLLELARLVEAAVG 480 >gi|167829616|ref|ZP_02461087.1| indole acetimide hydrolase [Burkholderia pseudomallei 9] gi|226193919|ref|ZP_03789520.1| amidase family protein [Burkholderia pseudomallei Pakistan 9] gi|225933864|gb|EEH29850.1| amidase family protein [Burkholderia pseudomallei Pakistan 9] Length = 442 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 131/451 (29%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 20 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 79 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 80 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 134 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 135 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 193 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 194 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 239 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 240 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 290 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 291 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 346 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 347 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 405 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + MP+GL L G + L ++ + +E+ Sbjct: 406 SKHTGMPVGLMLEGPAGNDRRLLAIAREVER 436 >gi|254185711|ref|ZP_04892229.1| amidase family protein [Burkholderia pseudomallei Pasteur 52237] gi|157933397|gb|EDO89067.1| amidase family protein [Burkholderia pseudomallei Pasteur 52237] Length = 454 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 215/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 32 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 91 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 92 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 146 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 147 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 205 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G DA P P ++ G+ VG+P D L P Sbjct: 206 IAHGIDDLLLLDAVLTG----DA---GEPAP-------VALAGLRVGVPDAPYFDGLDPA 251 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 252 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 302 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 303 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 358 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 359 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 417 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + MP+GL L G + L ++ + +E+ Sbjct: 418 SKHTGMPVGLMLEGPAGNDRRLLAIAREVER 448 >gi|53723142|ref|YP_112127.1| indole acetimide hydrolase [Burkholderia pseudomallei K96243] gi|76818487|ref|YP_336391.1| indole acetimide hydrolase [Burkholderia pseudomallei 1710b] gi|254264727|ref|ZP_04955592.1| amidase family protein [Burkholderia pseudomallei 1710a] gi|52213556|emb|CAH39609.1| putative indole acetamide hydrolase [Burkholderia pseudomallei K96243] gi|76582960|gb|ABA52434.1| indole acetamide hydrolase [Burkholderia pseudomallei 1710b] gi|254215729|gb|EET05114.1| amidase family protein [Burkholderia pseudomallei 1710a] Length = 467 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 215/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 45 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 105 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 159 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 160 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 218 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G DA P P ++ G+ VG+P D L P Sbjct: 219 IAHGIDDLLLLDAVLTG----DA---GEPAP-------VALAGLRVGVPDAPYFDGLDPA 264 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 265 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 315 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 316 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 371 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 372 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 430 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + MP+GL L G + L ++ + +E+ Sbjct: 431 SKHTGMPVGLMLEGPAGNDRRLLAIAREVER 461 >gi|167821278|ref|ZP_02452958.1| indole acetimide hydrolase [Burkholderia pseudomallei 91] gi|167916382|ref|ZP_02503473.1| indole acetimide hydrolase [Burkholderia pseudomallei 112] Length = 447 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 131/451 (29%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 25 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 84 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 85 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 139 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 140 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 198 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 199 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 244 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 245 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 295 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 296 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 351 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 352 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 410 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + MP+GL L G + L ++ + +E+ Sbjct: 411 SKHTGMPVGLMLEGPAGNDRRLLAIAREVER 441 >gi|197124419|ref|YP_002136370.1| amidase [Anaeromyxobacter sp. K] gi|196174268|gb|ACG75241.1| Amidase [Anaeromyxobacter sp. K] Length = 491 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 140/490 (28%), Positives = 238/490 (48%), Gaps = 50/490 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F V+ R++++++S VEL ++Y+ I+ + ++ V ++A A A ++ + Sbjct: 9 FSGVAALSRRIQARELSPVELAEAYLARIDALAPALGCFVTVTRERALADARAAEADLAA 68 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L G+P G+KD T GI T +H P ++TV ++L + G V+LGKL+M Sbjct: 69 GRWRGPLHGVPYGLKDLVDTAGIRTTFGAHPYADRVPERDATVARRLAEAGGVLLGKLSM 128 Query: 125 DEFAMG---SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E A G + E + GP +PW D T GSS G+ +AVA L +IG++T Sbjct: 129 VELAGGLGYHTGEAALNGPCRTPW---DPTRWAG--GSSSGAGSAVAAGLVPFAIGSETW 183 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+F G G++PTYG SR G + + +LD+ G + RT D A++L ++G D Sbjct: 184 GSITCPAAFCGVTGLRPTYGVLSRAGAMPLSYTLDKLGPMARTAEDCALVLGVLSGADPR 243 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--------SPTIDKTWQQGISWLK 293 D T + P P + ++G GIP+ R+ L +P ++ + L+ Sbjct: 244 DPTSIP-PPPGLG---NGRVRG---GIPRGLRVAVLGFPEKPAVAPGARAAYEAAQAVLR 296 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 DAGA + +LP Y A + I A++ +R G +++ + TR Sbjct: 297 DAGALLTPAALPDLPYEPLASFFIEAEAATAFEEL---IRSG---RTRELADRSHATRK- 349 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Y+ + S Y+RA ++R ++R F + D++L P P Sbjct: 350 -----------PDDYL--PKGNPSDYVRAMRVRGEVQRALAGFFAR-YDLVLAPNLP--- 392 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +P + N +M + D+ A N+AGLPA+++P L + +P+ +QL+G P E + Sbjct: 393 YPPPRVTENFDAM-FAFPDLLGAAGNLAGLPAVALPMGLVD-GLPVSMQLVGAPLEEARV 450 Query: 474 FSVGQIIEKE 483 + + + Sbjct: 451 LAAAALFQSR 460 >gi|293602480|ref|ZP_06684926.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter piechaudii ATCC 43553] gi|292819242|gb|EFF78277.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter piechaudii ATCC 43553] Length = 476 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 134/468 (28%), Positives = 208/468 (44%), Gaps = 37/468 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL+F E +R ++SA ++ ++ IE + + + A+ EV A++A A A+ +D+ Sbjct: 7 TELHFRDARELARAIRDGELSARQVTTHFLDRIERA-APLAAFSEVTAERALAQADAADR 65 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R L G+P+ +KD +GI T S G +T ++L G V+LG Sbjct: 66 LRDAGMLLGPLHGVPVAVKDSLQWQGIATTGGSQTRRGVISTETATAVRRLAAQGMVILG 125 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K M EFA G S + G +PW D+ PGGSS G+ A+A L A ++G DT Sbjct: 126 KTRMTEFAFGLSGQNPTQGTARNPW---DAKVARAPGGSSSGAGVAMAAGLTAIALGGDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ G VG KP+ G SR G + + +LD G ++R V D+ +L + +AG D Sbjct: 183 GGSVRAPAALNGVVGYKPSSGLISRAGCLPLSDTLDVLGPLSRNVADARLLTQLLAGPDV 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK---TWQQGISWLKDAGA 297 DA + LP AL + + +P D +W Q L AG Sbjct: 243 DDAATLALPA-SCVTALRHPAPRRAAAVAVLAPQAWPAPLSDAGLVSWHQAQEHLAQAG- 300 Query: 298 KIVEISLPHTQYALPAYYIISP-AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 L T + PA A+ +S + Y+ RY + ++E R+ Sbjct: 301 ------LTPTAWHPPASLSFERMADDNSVVLAYEAYRYYGALAENPAAPLWEVVRA---- 350 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 RI G R + Y A +R A QG+D +L P +A L Sbjct: 351 -----RIAAG-----GRIAQADY-EAALVRRQADMAAFAAAMQGLDALLMPACDQAAQAL 399 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 ++ +G + N G AI++PA L + MP+ +QL+ Sbjct: 400 DAQDVRHVGLGKLLRP-----ANFLGAAAIALPAGLDPEGMPMAVQLL 442 >gi|169807660|emb|CAQ16887.1| amidase [Rhodococcus erythropolis] Length = 521 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 207/430 (48%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVITRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDPQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLSEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRLQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L ++ + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPAKDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGKTFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|86748065|ref|YP_484561.1| amidase [Rhodopseudomonas palustris HaA2] gi|86571093|gb|ABD05650.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 504 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 24/427 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I +KD G+ S L+GF P +++TV ++ D G +LGK + + F M Sbjct: 88 LTGKTIALKDNIMLAGVPMMNGSSTLEGFVPDFDATVVMRILDAGGEILGKTHCEHFCMS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T GPV +P + M + + GS+ + A +IG D GGSIR PASF Sbjct: 148 GGSHTGSNGPVHNPHK-MGYSAGGSSSGSAVVVALGEADM----AIGGDQGGSIRMPASF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G G+KPT+G GI+ +D G +T +V D+A+LL+ +AG D D V Sbjct: 203 SGIYGMKPTWGLVPYTGIMPIEIFVDHTGPMTASVADNALLLEVLAGDDGYDPRIRAPVV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY +AL ++GM +GI +E + P ++++ ++ L GA + EIS+P Sbjct: 263 HDYTKALGGGVKGMKIGIVREGFEQAGAEPAVNESVREAAKRLASLGATVEEISIPAHNL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTR--SIGFGQEVKHRIM 364 A + I + + DG YGL + +++ + R + + K ++ Sbjct: 323 AAAVWMPIGTEGMTQTMMFGDG--YGLSRPDLYSTALMKAHRGWREQADSLSETTKMMLL 380 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-----GKE 419 GTY+ ++ +Y +A+ I + + A + D++L PTTP A PL +E Sbjct: 381 FGTYI-NNTFGPRYYGKAQNISRRVTAAYDAALAK-FDLLLMPTTPMKATPLPPPGASRE 438 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + I N T ++ PA+S+P + + +P+GL LIG+ F E T++ Sbjct: 439 EVIGRAFEMISN---TAPFDITHHPAMSLPCGMVD-GLPVGLMLIGKHFDEPTIYRAAHA 494 Query: 480 IEKEAGY 486 E+ + Sbjct: 495 FEQSGDW 501 >gi|310772424|dbj|BAJ23981.1| benzamide amidohydrolase [uncultured bacterium] Length = 499 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 125/436 (28%), Positives = 203/436 (46%), Gaps = 24/436 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I G R L+G I +KD G+ + +L+GF P ++T+ ++ D GA + Sbjct: 77 KTSIKGAPRGKLKGKRIAVKDNVFVAGVPLTNGASVLEGFVPDTDATIVTRMLDAGAEIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + +++ T+ GP+ +P T GGSS GS+A VA +IG D Sbjct: 137 GKSVCEYLCFATNSATANTGPIDNP-----RAPGHTTGGSSNGSAALVAAREVDMAIGAD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GSIR PASF G VG KPTYG GI+ S D G + TV + A+LL+ IAG D Sbjct: 192 QAGSIRMPASFCGIVGHKPTYGLVPYTGILGIEYSFDHVGPMADTVEECALLLEVIAGDD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + Y +AL + ++G+ +G+ +E + +D+ ++ L+ GA Sbjct: 252 GIDGRQKGVRTQPYTKALGKGVKGLRIGVVQEGFGRPESEDGVDQAVREAAKRLQQQGAT 311 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK----DILEMYENTRSIG 354 + +S+P + I + NL G+ YG E + + N + Sbjct: 312 VDLVSIPWHNIGSALWLPIGIEGSYQNLVHGHGISYGTLGEYSLSYMRAIASWPN-HANE 370 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 +K ++ G L R Y +AR + ++ ++ +Q DV++ PTTP +A Sbjct: 371 LAPTIKGSLLTGE--LLKRHGGRLYAKARNLVRRLRSEYDAWLDQ-YDVLIMPTTPMTAT 427 Query: 415 PLGKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 L E+ + S G + N T ++ G PAISV + + K P+GL ++G+ F Sbjct: 428 ELVFEDASPKDILHASWGPLNN---TCPFDLTGHPAISVCCGISDGK-PVGLMVVGRHFE 483 Query: 470 EETLFSVGQIIEKEAG 485 + T+F V ++ G Sbjct: 484 DATVFQVADAAHQQQG 499 >gi|1170450|sp|Q09102|HYIN_AGRRH RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|385071|gb|AAA22079.1| hydrolase [Agrobacterium rhizogenes] Length = 466 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 138/499 (27%), Positives = 216/499 (43%), Gaps = 54/499 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + +++E+ LR + S EL+++ I E + S +NA++E R A + D+ Sbjct: 2 VTLSSITETLKCLRERKYSCFELIETIIARCEAARS-LNAFLETDWAHLRWTASKIDQHG 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G P+ K AT A + L +P + V ++L GA+ N Sbjct: 61 GAGVGLAGV--PLCFKANIATGRFAATAGTPGLQNHKPKTPAGVARQLLAAGALPGASGN 118 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E + G ++ G V +PW PGGSSGG +AAVAG L +GTDTG S Sbjct: 119 MHELSFGITSNNFATGAVRNPWNP-----SLIPGGSSGGVAAAVAGRLMLGGVGTDTGAS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA+ G VG +PT GR GI+ +P+ D G+I + V D ILL I Sbjct: 174 VRLPAALCGVVGFRPTVGRYPTDGIVPVSPTRDTPGVIAQNVPD-VILLDGI-------- 224 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 C PV R ++G+ +G+P Y + L P + + I L VE Sbjct: 225 ICGRPPVNQTVR-----LKGLRIGLPTAYFYNDLEPDVALAAETIIRVLARKDVTFVEAD 279 Query: 304 LPHTQY-----ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +P + + P P + + VEG E+ RS Sbjct: 280 IPDLAHHNEGVSFPTAIYEFPLSLEHYIQNF--------VEGVSFSEVVRAIRSPDVASI 331 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLG 417 + ++ S C + R R ++ + F+ +D IL PT P +A P+G Sbjct: 332 LNAQLSDNLISKSEYCLARRFFRPR-----LQAAYHSYFKAHQLDAILFPTAPLTAKPIG 386 Query: 418 KEEN--NSGSMGHIYNDVFTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + + ++GSM D F + V + AGLP +S+P +L +P+G+++ G Sbjct: 387 HDLSVIHNGSM----TDTFKIFVRNVDPSSNAGLPGLSLPVSLSSNGLPIGMEIDGSASS 442 Query: 470 EETLFSVGQIIEKEAGYFR 488 +E L ++G IE EA FR Sbjct: 443 DERLLAIGLAIE-EAIDFR 460 >gi|23304611|emb|CAD36560.1| amidase [Rhodococcus erythropolis] gi|66392703|emb|CAG29808.1| amidase [Rhodococcus erythropolis] Length = 521 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 207/430 (48%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDRQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRIQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L ++ + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPAKDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGRHFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|116624345|ref|YP_826501.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116227507|gb|ABJ86216.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 438 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/483 (26%), Positives = 209/483 (43%), Gaps = 77/483 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R IS +ELVD+++ I NS++NA++ V+A++AR A ++ G L G+P Sbjct: 14 VRDGAISPLELVDAHLAQIAARNSEINAFVMVLAEEARERARSLER---GGRRGLLYGLP 70 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD F + T+ S ++TV +L GA++LG+ N E + Sbjct: 71 VTVKDSFDMARLPTRVGSRERPLTPAARDATVVARLLAEGAIVLGRTNTPEMLARYDTDN 130 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 G +PW D+ TPGGSSGG +AA+A + + +D GGSIR PA F G G Sbjct: 131 PITGRTSNPW----DLDR-TPGGSSGGEAAAIAAYCSPGGVASDGGGSIRMPAHFCGIAG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +KPT GR S G I P+L G + RT +D +L ++GYD D V + Sbjct: 186 LKPTQGRISGAGHI---PALGHPAGLVATVGPMARTAQDLRLLFSVLSGYDAQDPFSVPV 242 Query: 249 PV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P+ P ER + +G+ +++ + P + ++ + D G + Sbjct: 243 PLREPPAER--------LRIGVWEQFYTVPVEPEVRDAVRRAAALASDLGFTV------- 287 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 G G LE N S FGQ V + Sbjct: 288 ---------------------------DGFEPRG---LERAPNLWSFLFGQWVAKGSELT 317 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE--NNSG 424 + +RA +R + + V +L P +AF G+ + Sbjct: 318 AAEALNNLAARDRMRAALLRQM----------EDVAAVLMPVFGITAFRHGESKWLVEGK 367 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +G + V N+ GLPA+++P A+ +P+G+QL+G+PF +E L V +E+ Sbjct: 368 EIGLFQAGMPAVVANVLGLPAVTIPIAVTAAGLPVGVQLMGRPFEDELLLEVAIQLEEAR 427 Query: 485 GYF 487 G + Sbjct: 428 GAW 430 >gi|329296928|ref|ZP_08254264.1| amidase [Plautia stali symbiont] Length = 465 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 137/493 (27%), Positives = 222/493 (45%), Gaps = 55/493 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++S+ + L D+SA ++ + AIE N +NA+ V Q+ A+ D++ Sbjct: 3 LAALSISQLQQALAQGDLSARDIAQQTLAAIEQHNPAINAWTAVTTQRMLREADRLDQQR 62 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLG 120 G+ L GIP +K+ F G T A + + RP ++ KL +GA++ G Sbjct: 63 QRGEPLPALAGIPYAVKNLFDVAGHSTLAGASLFSE-RPVAQQDAWAVSKLQQSGALLSG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 LNMD +A G + E ++YG +P R + + GGS+ +A + F S+GTDT Sbjct: 122 MLNMDAYAYGFTTENTHYGATRNP-RDLSRVAGGSSGGSAAAVAAGLVHF----SLGTDT 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR PAS G G+KPT+GR SR G F SLD G R+V D +++ A+ G D Sbjct: 177 NGSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARSVEDLSLVYDALQGGDA 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DA P L + + + + D+ S ++ A Sbjct: 237 SDAFQAARPAELVSDRLSAGSEKLRSAVLGGFFADWCSDDARAA----VAVAASALGAAE 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQE 358 E++LP + A A +I++ AE G Y LR + + F Sbjct: 293 EVTLPQDELARSAAFIMTAAEG--------GNHYLPALRTQPER------------FEPN 332 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + + + Y++A++ R ++ F+ DV++ P TP +A LG+ Sbjct: 333 SRERLLAGAMLPA-----AWYVQAQRFRRHFQQQVLPLFDH-YDVLIAPATPCTATTLGQ 386 Query: 419 EE--------NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 E SMG + T ++ GLP SVP L +P+GLQLI PF E Sbjct: 387 ETIHINGQDLPTRASMG-----MLTQPISFLGLPVCSVP-LLTASGLPIGLQLIAAPFNE 440 Query: 471 ETLFSVGQIIEKE 483 + ++++ Sbjct: 441 QLALRAAWALQQQ 453 >gi|113712|sp|P22984|AMID_RHOER RecName: Full=Amidase gi|98713|pir||A37806 amidase (EC 3.5.1.4) - Brevibacterium sp. (strain R312) gi|98836|pir||S15070 amidase (EC 3.5.1.4) - Rhodococcus sp. (strain N-774 and strain ACV2) gi|262367837|pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase gi|46411|emb|CAA38009.1| amidase [Rhodococcus sp.] gi|144091|gb|AAA62721.1| enantiomer-selective amidase [Brevibacterium sp.] gi|4126496|dbj|BAA36596.1| amidase [Rhodococcus sp. N-771] gi|66392690|emb|CAG29798.1| amidase [Microbacterium sp. AJ115] Length = 521 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 207/430 (48%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDRQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRIQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L ++ + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPAKDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGRHFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|167860533|gb|ACA05044.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Flammeovirga yaeyamensis] Length = 196 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 85/195 (43%), Positives = 123/195 (63%), Gaps = 7/195 (3%) Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMY 347 I LK G + I P Y LP YYI++ AEAS+NL R+DGVRYG R + KD+ +Y Sbjct: 2 IKALKAEGHTVEGIEFPLLDYLLPTYYILTTAEASTNLERFDGVRYGYRTDQPKDLEALY 61 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + +RS GFG EVK RIM+GT+VLS+ YD+++ +A+K+R LIK + TE D IL P Sbjct: 62 KKSRSEGFGDEVKRRIMLGTFVLSASYYDAYFSKAQKVRRLIK-ETTEKILSEYDFILMP 120 Query: 408 TTPTSAFPLGKE-ENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 TT T +F +G+ ENN + +Y D++TV ++AGLPAIS+P + + +GLQ++ Sbjct: 121 TTSTPSFKIGEYGENN---LLELYLGDLYTVHASLAGLPAISIPNGEDKDGLTIGLQIMA 177 Query: 466 QPFREETLFSVGQII 480 F EE + + + Sbjct: 178 NRFEEEKMLAFSNYL 192 >gi|158712011|gb|ABW79803.1| amidase [Rhodococcus erythropolis] Length = 521 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 206/430 (47%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDPQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLAEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRLQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L + + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPANDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGKTFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|226309410|ref|YP_002769370.1| amidase AmdA [Rhodococcus erythropolis PR4] gi|226188527|dbj|BAH36631.1| amidase AmdA [Rhodococcus erythropolis PR4] Length = 521 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 207/430 (48%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDPQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRIQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L ++ + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPAKDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGRTFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|284039319|ref|YP_003389249.1| amidase [Spirosoma linguale DSM 74] gi|283818612|gb|ADB40450.1| Amidase [Spirosoma linguale DSM 74] Length = 530 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 141/506 (27%), Positives = 231/506 (45%), Gaps = 50/506 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIE--NSNSQMNAYIEV---VAQKARAAAEESDKRI 63 +S+ RS +++ +LV++Y++ I+ + ++++N+ I + ARA E K Sbjct: 49 ISDIHRAYRSGSLTSEQLVNAYLERIKTYDQSTKLNSIIIINPDAITTARALDAEFKK-- 106 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G R L GIP+ +KD + TKG+ T S L GF P ++ +KL + GA++L K N Sbjct: 107 -TGKLRPLHGIPVIVKDNYNTKGLQTTGGSIALKGFAPTEDAYQVKKLREAGAIILAKSN 165 Query: 124 MDEFAMGS-SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 M E+A +++S G ++P+ + P GSSGG++AAVA A +G+DTG Sbjct: 166 MAEWAFTPMHSQSSILGETLNPYNL-----AYVPAGSSGGTAAAVAANFGAVGLGSDTGN 220 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+S VG++ + G SR GII D G + RT+ D+ LL AGYD D Sbjct: 221 SIRGPSSHNALVGLRTSLGLVSRYGIIPLYSRNDVGGPMCRTMEDAVRLLDLTAGYDPKD 280 Query: 243 ATCVN----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 N +P ++G +G+ ++ + P I + + + ++ + AGA+ Sbjct: 281 PITKNSQGKVPKTYMPFLRKDGLKGARIGVMRQLSDKNVHPEIKQLFGKALADMARAGAE 340 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-GFGQ 357 I+++++P + A S R D Y +D L+ E+ I G+ Sbjct: 341 IIDVTIPE--------FDSLRANQSCAEFRTDIENYLQTFVKRDTLKTLEDIIRIGGYSD 392 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE----AFEQGVDVILTPTT---- 409 V+ R+ TY +H RAR FT+ A+ GV+ + Sbjct: 393 IVRDRL---TY------QQTHSGRARHPEIPCGDPFTDPLRIAYRNGVEAEMNRLKVDAL 443 Query: 410 --PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 PT +P + G G D V G PA +VP +P G+Q +G+ Sbjct: 444 VYPTWNYPPALVGDAKGYKG----DNSQVVAPATGQPAFTVPMGYTTGDLPAGIQFLGRI 499 Query: 468 FREETLFSVGQIIEKEAGYFRPHKWW 493 F E TL + E+ + P K + Sbjct: 500 FDEPTLIRLAYAYEQATHHRMPPKRF 525 >gi|86160344|ref|YP_467129.1| amidase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776855|gb|ABC83692.1| Amidase [Anaeromyxobacter dehalogenans 2CP-C] Length = 491 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 137/490 (27%), Positives = 237/490 (48%), Gaps = 50/490 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F V+ R++++++S VEL ++Y+ I+ + ++ V ++A A A ++ + Sbjct: 9 FSGVAALSRRIQARELSPVELAEAYLARIDALGPALGCFVTVTRERALADARAAEADLAA 68 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L G+P G+KD T GI T + P +++TV ++L + G V+LGKL+M Sbjct: 69 GRWRGPLHGVPYGLKDLVDTAGIRTTFGARPYADRVPEHDATVARRLAEAGGVLLGKLSM 128 Query: 125 DEFAMG---SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E A G + E + GP +PW D T GSS G+ +AVA L +IG++T Sbjct: 129 IELAGGLGYHTGEAALNGPCRTPW---DPTRWAG--GSSSGAGSAVAAGLVPFAIGSETW 183 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+F G G++PTYG SR G ++ + +LD+ G + RT D A++L ++G D Sbjct: 184 GSITCPAAFCGVTGLRPTYGVLSRAGAMALSYTLDKLGPMARTAEDCALVLGVLSGADPR 243 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--------SPTIDKTWQQGISWLK 293 D T + P P + ++G GIP+ R+ L +P + ++ + L+ Sbjct: 244 DPTSIA-PPPGLG---NGKVRG---GIPRGLRVAVLGFPEKPAVAPGVRAAYEAAQAVLR 296 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 D GA + +LP Y A I A++ +R G +++ + TR Sbjct: 297 DGGAILTPAALPDLPYEPLASLFIEAEAATAFEEL---IRSG---RTRELADRSHATRK- 349 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Y+ + S Y+RA ++R ++R F + D++L P P Sbjct: 350 -----------PDDYL--PKGNPSDYVRAMRVRGEVQRALAGFFARH-DLVLAPNLP--- 392 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 +P + N +M + D+ A N+AGLPA+++P + +P+ +QL+G P E + Sbjct: 393 YPPPRVTENFDAM-FAFPDLLGAAGNLAGLPAVALPMGFVD-GLPVSMQLVGAPLEEARV 450 Query: 474 FSVGQIIEKE 483 + + + Sbjct: 451 LAAAALFQSR 460 >gi|293607546|ref|ZP_06689880.1| amidase [Achromobacter piechaudii ATCC 43553] gi|292813979|gb|EFF73126.1| amidase [Achromobacter piechaudii ATCC 43553] Length = 503 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 133/490 (27%), Positives = 236/490 (48%), Gaps = 43/490 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIE--VVAQKARAAAEESDKRIING-------DARD 70 D + + DS ++A Q++A I+ + Q R + + +N D R Sbjct: 23 DDATLRAYDSILEATFAEYDQVDALIDQPPLVQYPRTPGVQPEDNPLNAWYVRTEIDGRQ 82 Query: 71 ---LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G + +KD G+ + L G+ P ++TV ++ D G ++GK + + F Sbjct: 83 GGPLAGKRVVLKDNICLAGVPMMNGAATLRGYVPDQDATVATRILDAGGRIVGKAHCEYF 142 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + S+ T+ GPV +P + + GGSS G++A V +IGTD GGS+R P Sbjct: 143 CVSGSSHTNATGPVRNP-----RNPEHSAGGSSSGAAALVGAGEADMAIGTDQGGSVRIP 197 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+++G G+KPT+G GI+ +LD AGI+T V D+A+LL A+AG D D Sbjct: 198 AAYSGIYGMKPTHGLIPYTGIMPIEMTLDHAGIMTANVADNALLLDAVAGPDGLDPRQQG 257 Query: 248 LPV--PDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 LP P Y AL ++G+ +G +P+ + +D+ ++ + GA+++E+ + Sbjct: 258 LPAERPAYSDALGMPLKGLRIGVVPEGFGWANSESEVDEAVRKAAREMAALGAEVIELPV 317 Query: 305 P-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR-----SIGFGQE 358 P H + + I +P + G YG +G + + + R + F + Sbjct: 318 PLHRK----GHAIWTPIAVEGTTQQMKGFNYGTNWKGLYVTGLMQAQRHWRDHADEFPHD 373 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK ++ G Y +R +Y +A+ + +++ + +A ++ VD++L PT P A L Sbjct: 374 VKTCLLAGEY-FYARYGGQYYGKAQNLARRLRQAYDQALDR-VDLLLMPTVPMRAPRL-- 429 Query: 419 EENNSGSMGHIY------NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N+ + ++ + T ++ G PAISVP AL ++P+G+ L+G+ F E T Sbjct: 430 --INADAAPDLFVTRALEMNANTAPFDVTGHPAISVPCAL-RDELPVGMMLVGRHFDEAT 486 Query: 473 LFSVGQIIEK 482 L+ E+ Sbjct: 487 LYRAAHAFER 496 >gi|37718703|dbj|BAC99079.1| amidase [Rhodococcus globerulus] Length = 521 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 206/430 (47%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDPQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLAEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRLQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L + + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPANDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGKTFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|89100059|ref|ZP_01172929.1| amidase [Bacillus sp. NRRL B-14911] gi|89085293|gb|EAR64424.1| amidase [Bacillus sp. NRRL B-14911] Length = 506 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 154/498 (30%), Positives = 229/498 (45%), Gaps = 60/498 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIIN 65 + E +++L ++S+ ELV Y+ I + +N+ +EV + AA +R + Sbjct: 35 IDEMQEKLEKGEVSSKELVLMYLHRIAQKDKNGPAINSVLEVNPDAVQIAAALDAERKLK 94 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIP+ IKD T +HT A S L +S V + L GAV+LGK NM Sbjct: 95 GSRGPLHGIPVLIKDNIDTADKMHTSAGSLALKESVAKEDSYVAEALRKAGAVILGKTNM 154 Query: 125 DEFAM-----GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S +S G V++P+ F GGSS GS AA+A A S+GT+ Sbjct: 155 TEWANFMTEGMPSGYSSRGGQVLNPY----GPGNFDVGGSSSGSGAAIASNFAAVSVGTE 210 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS VGIKPT G SR GII A S D AG + RTVRD+ LL +AG D Sbjct: 211 TSGSILSPASQNSLVGIKPTVGLISRRGIIPIAHSQDTAGPMARTVRDAVYLLDVLAGND 270 Query: 240 ECDATCVNLPVPDYER---ALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 + D N P DY LD++ ++G +GI +E DYLS + + LK Sbjct: 271 DRDPAVQNNPESDYTEFAGFLDENGLKGKRIGIAREVYFDYLSGDKLEVMNHAVEQLKAL 330 Query: 296 GAKIVE-ISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEM-YENTR 351 GA++V+ + +P T+ Y + E ++L Y GV ++V+ D++ EN+ Sbjct: 331 GAEVVDPVEIPSTKNNWK--YDVLTYEFKADLNAYLRGVAPHIKVKSLADVIAFNLENSE 388 Query: 352 -SIGFGQEVKHRIMIGTYVLSSRCY------DSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 ++ +GQ + + L+ Y D ++ I ++K E +D I Sbjct: 389 AALKYGQTILEEAERTSGTLTEEAYISSLEEDVYFSTEEGIDHVLK-------EHHLDAI 441 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 +TP + P AG P+I+VPA + P+G+ Sbjct: 442 VTPNNFGAGIPA-----------------------KAGYPSITVPAGYSLENEPVGITFT 478 Query: 465 GQPFREETLFSVGQIIEK 482 G F E L S+ E+ Sbjct: 479 GTAFSEAGLISMAYAFEQ 496 >gi|258510889|ref|YP_003184323.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477615|gb|ACV57934.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 475 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 146/487 (29%), Positives = 230/487 (47%), Gaps = 42/487 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARD-L 71 +R D+S++++V +++ I N + A IEV + A AE D+ NG R L Sbjct: 15 IRQGDVSSLDVVARHLEQIAAHNVNGMGIRAVIEVNPE-ALLEAEARDRERRNGFLRGPL 73 Query: 72 EGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 G+PI +KD T + T A S L+G R ++ V ++L GAV++GK N+ E+A Sbjct: 74 HGVPILVKDNLDTADAMQTTAGSVALEGHRAREDAEVVRRLRAAGAVIVGKANLTEWANF 133 Query: 131 SSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 S+ +S G ++P+ +F GGSS GS A VA A+IGT+T GSI Sbjct: 134 LSDHMPNGYSSRGGQTLNPY----GPGRFDVGGSSSGSGAGVAAGFAPAAIGTETSGSIL 189 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P+S VG+KPT G SR GII A S D AG +TRTV D+A+L+ IAG D D Sbjct: 190 SPSSANSLVGLKPTLGMVSRRGIIPIAMSQDTAGPMTRTVADAALLMSVIAGPDPRDVAT 249 Query: 246 VNLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + P E LD +++G +G+P+ Y L+ + + + + +S L++ GA ++E Sbjct: 250 QGVRWPSREAWLDLGRGALKGARIGVPQAY-LEEVPEDERRVFNEALSELRELGADVIEC 308 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LP + PA LA + + + R++ +GQ + R Sbjct: 309 DLPKRDFDFDVLVAEFPAALDRYLATVEPWLPVHSLADVMVFNARNADRALRYGQAIFER 368 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 +++ D Y+RAR RD E+ E+G+D L E+ Sbjct: 369 AQAQSHL---HLADGSYVRAR------LRDLRESREEGIDRALA-------------EHR 406 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ + +A AG P+I+VPA + P+GL L G + + L + E+ Sbjct: 407 LDAIAFVNYYGCAIAAK-AGYPSITVPAGYTPEGKPVGLTLTGTAYSDVRLCQLAHDYEQ 465 Query: 483 EAGYFRP 489 + RP Sbjct: 466 ATKHRRP 472 >gi|238894806|ref|YP_002919540.1| amidase [Klebsiella pneumoniae NTUH-K2044] gi|238547122|dbj|BAH63473.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 465 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 142/489 (29%), Positives = 216/489 (44%), Gaps = 51/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-R 62 L +++ + L ++SA E+ + I N Q+NA+ EV AQ+ A A+ D R Sbjct: 3 LQHFTIADLQRALHDGELSAREIARQTLDDIARVNPQINAWTEVTAQRMLAEADSIDALR 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGK 121 L GIP +K+ F G T A + +L P +S ++L GA++ G Sbjct: 63 REKRPLPPLAGIPYAVKNLFDVAGHTTLAGAELLSDRPPAASDSWAVRQLHSAGALLSGM 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P + + GGS+ +A + F S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGATRNP-HDLSRIAGGSSGGSAAAVAAGLVHF----SLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + A+ G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDALQGRDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIV 300 D + L++ ++G+ RL Y + D + + + A + Sbjct: 238 DDFQADKASERTGNMLERGLEGLRCA-----RLGGYFTTWCDDDARAAVERVAHALSADS 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ A A +IIS +E + D+ E F + Sbjct: 293 ELQFADAALARSAAFIISASEGGNQYL-------------TDLRHSPER-----FEPHSR 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + S + YL+A++ R ++ F Q DV++ P TP SA P+G EE Sbjct: 335 ERLLAGAMIPS-----AWYLQAQRFRRHARQAMKSLFSQA-DVLIAPATPCSATPIGAEE 388 Query: 421 ---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N SMG + T ++ GLP ++VP K P+GLQLI PF E+ Sbjct: 389 MVINGQPLPVRASMG-----MLTQPISFLGLPVVTVPLRTASGK-PIGLQLIAAPFNEQA 442 Query: 473 LFSVGQIIE 481 + +E Sbjct: 443 CLRAARALE 451 >gi|331699920|ref|YP_004336159.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326954609|gb|AEA28306.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 474 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 127/476 (26%), Positives = 208/476 (43%), Gaps = 58/476 (12%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 E V + + + + +N I + +A AAAEES +R +G R LEG+P +KD Sbjct: 20 ETVAGSLARLRDVHEALNTTIAFLDDRALAAAEESARRWASGTPRVLEGVPFAVKDVIDV 79 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 G+ T S + D + V ++L GA+ + K EFA+G N +G +P Sbjct: 80 AGVPTTGGSWVCDDAPAARSAEVVRRLEAAGAIAVSKDTTTEFAVGGPNP-PRFGTTRNP 138 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 W GGSS G++AAVA +GTD GGS+R P+++ G G+KPT G Sbjct: 139 WDPQRWA-----GGSSMGTAAAVAARAVPFGLGTDVGGSVRLPSAWCGLTGLKPTSGAIP 193 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 R G+I + + + G + R+ RD +L + G D D L P + A ++G+ Sbjct: 194 RTGVIPLSWTAETVGPLCRSARDVELLFGLLRGPDGVDPRATAL--PPFIPATGDDLRGV 251 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 V + Y + + + L DAGA+IV+ +P L Y I EA+S Sbjct: 252 RVAVVGGYLTEMCDGAVRSGIDEMAGVLADAGAEIVDADIPSASEVLAIGYRIVWVEAAS 311 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 + R + R+ Y+ + RI G +++ D YL A++ Sbjct: 312 -VHRVNAARW----------SEYDPV--------LVSRISQG---IATPAVD--YLLAQQ 347 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSA--------------FPLGKEENNSGSMGHIY 430 R ++R+ E F D++L PT P++A FPL ++ S +G Sbjct: 348 FRVRLQRELDEVFAH-ADLVLVPTCPSTAPRLPEATVVVDGEEFPLYAAQSRSTMLG--- 403 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 N+ G P ++VP +P+ QL+ P +E T ++ ++ + Sbjct: 404 --------NLTGAPGLAVPTGFAPDGLPVSAQLMAPPHQEATALRAARVFQERTAH 451 >gi|254515113|ref|ZP_05127174.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR5-3] gi|219677356|gb|EED33721.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR5-3] Length = 562 Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 146/499 (29%), Positives = 230/499 (46%), Gaps = 58/499 (11%) Query: 21 ISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 +S+ LV +Y+ I + Q +N + + R A E ++R ++G + GIP+ Sbjct: 75 LSSERLVQAYLDRIAAYDQQGPSLNTVMHLNPDALRRARELDEERRVSGPRSPMHGIPVV 134 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD T + T A S +L G P ++ V +KL D GA+++ KLN+ EFA G + + Sbjct: 135 IKDNLDTADMPTTAGSFMLAGSLPPDDAYVVKKLRDAGAIIIAKLNLSEFASGGA--LNS 192 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G VI+ + T P GSSGG+ AA+A + +GTDTGGS+R P+S G VG+K Sbjct: 193 LGGVIANPHHLGRT----PSGSSGGTGAAIAAGFASMGLGTDTGGSVRGPSSANGIVGLK 248 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC---VNLPVPDYE 254 T+G SR G++ A S D G +TR+V D A+ L + G D D + +N DY Sbjct: 249 TTHGLLSRDGVVPLALSFDTVGPMTRSVTDLAVALGVMTGVDPADESTQKSINKFYTDYS 308 Query: 255 RALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + L S+ G +G+ + + D +D + + ++DAGA +V++ P ++ L + Sbjct: 309 QFLQSDSLSGARIGVARVFMND--DGEVDWLVESALQSMRDAGATVVDVEFP--EWLLKS 364 Query: 314 ----YYIISPAEASSNLARYDGV---RYGLRVEGKDILEMYEN-----------TRSIGF 355 Y I E + +A Y Y +EG M N +R Sbjct: 365 RGNFYRAIRYPEFKAQIADYLATLEGNYPRDLEGLIAKAMTLNAKRDDGVIPNPSRWSLM 424 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLR--ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 +EV+ ++G R SH L A I L+K + +D I+ PT + A Sbjct: 425 RKEVEATDLMG---FEYRAVKSHALPLVAETIAGLMK-------DNNLDAIVYPTASSPA 474 Query: 414 ----FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P G E SG I N++G P + +P + MP+ L ++G F Sbjct: 475 ELIERPAGTSEPGSGGSPVIL-------ANLSGFPDLILPIGFTGRGMPVTLSMLGTAFS 527 Query: 470 EETLFSVGQIIEKEAGYFR 488 E TL + +E+ R Sbjct: 528 EPTLIGLAYALEQRLQAIR 546 >gi|152970322|ref|YP_001335431.1| amidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955171|gb|ABR77201.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 465 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 142/489 (29%), Positives = 215/489 (43%), Gaps = 51/489 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-R 62 L +++ + L ++SA E+ + I N Q+NA+ EV AQ+ A A+ D R Sbjct: 3 LQHFTIADLQRALHDGELSAREIARQTLDDIARVNPQINAWTEVTAQRMLAEADSIDALR 62 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGK 121 L GIP +K+ F G T A + +L P +S ++L GA++ G Sbjct: 63 REKRPLPPLAGIPYAVKNLFDVAGHTTLAGAELLSDRPPATSDSWAVRQLHSAGALLSGM 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YG +P + + GGS+ +A + F S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGATRNP-HDLSRIAGGSSGGSAAAVAAGLVHF----SLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G R V D A + A+ G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDALQGRDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIV 300 D + L++ ++G+ RL Y + D + + + A Sbjct: 238 DDFQADKASERTGNLLERGLEGLRCA-----RLGGYFTTWCDDDARAAVDRVAHALGADS 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ A A +IIS +E + D+ E F + Sbjct: 293 ELQFADAALARSAAFIISASEGGNQYL-------------TDLRHSPER-----FEPHSR 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R++ G + S + YL+A++ R ++ F Q DV++ P TP SA P+G EE Sbjct: 335 ERLLAGAMIPS-----AWYLQAQRFRRHARQAMKSLFSQA-DVLIAPATPCSATPIGAEE 388 Query: 421 ---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N SMG + T ++ GLP ++VP K P+GLQLI PF E+ Sbjct: 389 MVINGQPLPVRASMG-----MLTQPISFLGLPVVTVPLRTASGK-PIGLQLIAAPFNEQA 442 Query: 473 LFSVGQIIE 481 + +E Sbjct: 443 CLRAARALE 451 >gi|229494737|ref|ZP_04388495.1| amidase [Rhodococcus erythropolis SK121] gi|229318404|gb|EEN84267.1| amidase [Rhodococcus erythropolis SK121] Length = 521 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 205/430 (47%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S + GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVKGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDPQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLAEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRLQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L + + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPANDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGKTFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|262192883|ref|YP_001077612.3| indole acetimide hydrolase [Burkholderia mallei NCTC 10247] gi|126238882|gb|ABO01994.1| indole-3-acetamide hydrolase-related protein [Burkholderia mallei NCTC 10247] Length = 454 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 227/478 (47%), Gaps = 44/478 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + + + A+E ++ ++ + + A V + AR AA D +I +G L G Sbjct: 6 DAVNGRRVRALEQAEAALERLALVEP-LAAMTHVAPEIARRAAANVDAQIASGRRLPLAG 64 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T+A S L GF +T Q+L D GAV LGK NM E A G ++ Sbjct: 65 VPFVIKDNLFTADMPTRAASPALLGFDATRNATAVQQLLDAGAVPLGKANMHELAFGITS 124 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y+G V +P GGSSGG++ AVA + A +GTDTGGS+R PA+F G Sbjct: 125 ANGYFGAVRNPHDPARIA-----GGSSGGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGV 178 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++PT R S G+++ +P+ D G I + D +L + G DA P P Sbjct: 179 AGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTG----DA---GEPAP-- 229 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ G+ VG+P D L P + + ++ ++ L DAGA+++ ++ A Sbjct: 230 -----VALAGLRVGVPDAPYFDGLDPAVAELTERALAALTDAGARLIPLA---------A 275 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + EA +A ++ + Y R + + L E +G +V+H + ++ Sbjct: 276 HALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLG-SDDVRHLFRM---LID 331 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN---SGSMG 427 + Y A + R + +AF + GVD I PT A PL + + S + Sbjct: 332 APPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAY 390 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 ++ V T + G+P++S+PA L + +P+GL L G + L ++ + +E+ Sbjct: 391 ALFARVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 448 >gi|114763201|ref|ZP_01442627.1| putative amidase [Pelagibaca bermudensis HTCC2601] gi|114544254|gb|EAU47263.1| putative amidase [Roseovarius sp. HTCC2601] Length = 570 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 128/463 (27%), Positives = 203/463 (43%), Gaps = 50/463 (10%) Query: 37 SNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKG-IHTQACSH 94 S + A+IE + ARA A D G R L GIP+ KDCF G T + Sbjct: 137 SKPRHCAFIETYEESARAKARSLDDAAAQGLHRGPLHGIPLAHKDCFEQAGRAMTVGAAV 196 Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 D ++TV + GAV +G LNM+E G + + ++G + W + Sbjct: 197 RRDAAPAERDATVIARYDTAGAVNIGSLNMNEMVCGPTGQNPHFGDCCNAWDPSRISGGS 256 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 + G + ++ A+ G ++G+DTGGS R P+S G G+KPTYG SR G A S Sbjct: 257 SSGSAVAVATGAIFG-----ALGSDTGGSTRLPSSMNGVFGLKPTYGLVSRAGSFPRAFS 311 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD------QSIQGMTVGI 268 LD G I R+ D A+LL+++AG+D D T +++PVPDY D + +++G+ Sbjct: 312 LDSIGPIARSAEDCALLLRSVAGHDPRDPTSLDVPVPDYLSLFDAPWVMQSRVAALSLGV 371 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 P + P I + + + D P + IIS EA++ Sbjct: 372 PCD-------PGIQEVFDRFTVRCTDMFEAAPARDFPEMEACYALGDIISKVEAAT---- 420 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 + + + + E F Q V R G +V + R YL A +R Sbjct: 421 ---------LHSEAMRQSPER-----FSQAVFSRTEPGLHVPAVR-----YLEALSLRAT 461 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV-----FTVAVNMAGL 443 + R F + DV++ PT P PL + + + + ++ V T + G+ Sbjct: 462 VLRSFLDGPLGDTDVLICPTVPLP-VPL-RNDADMEAPDSVFGVVAAITRLTRTFSYLGV 519 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 P +S+P + MP+G QLI +P E L +V + + G+ Sbjct: 520 PVLSMPIGVDANGMPVGAQLIARPLDEGRLLAVAHQLSLQMGW 562 >gi|262118484|pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GG+IR PA+F Sbjct: 148 GSSFTPASGPVRNPWDRQREAGG-----SSGGSAALVANGDVDFAIGGDQGGAIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY LD + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + DG YG+ EG +++ + + R + + VK Sbjct: 323 HAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRIQHADALSETVKLV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L ++ + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPAKDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGRHFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|316932527|ref|YP_004107509.1| amidase [Rhodopseudomonas palustris DX-1] gi|315600241|gb|ADU42776.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 504 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 121/423 (28%), Positives = 205/423 (48%), Gaps = 24/423 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD G+ S L+G+ P +++TV ++ D G +LGK + + F M Sbjct: 88 LKGKTVALKDNIMLAGVPMMNGSSTLEGYVPDFDATVVTRILDAGGEILGKTHCEHFCMS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T GPV +P + M + + GS+ + A ++G D GGSIR P+SF Sbjct: 148 GGSHTGSNGPVHNPHK-MGYSAGGSSSGSAVVVALGEADM----AMGGDQGGSIRMPSSF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +GT G+KPT+G GI+ +D G +T V D+A+LL+ IAG D D V Sbjct: 203 SGTYGMKPTWGLVPYTGIMPIEIYVDHTGPMTANVEDNALLLEVIAGDDGYDPRIRAPIV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +Y +AL Q I+GM +GI +E + P ++++ ++ L GA + EIS+P Sbjct: 263 HEYTKALGQGIKGMKIGIVREGFEQPGAEPAVNESVREAAKRLASLGATVEEISIPAHNL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTR--SIGFGQEVKHRIM 364 A + I + + DG YGL + +++ + R + + K ++ Sbjct: 323 AGAVWMPIGTEGMTQTMMVGDG--YGLSRPDLYSTTLMKAHRGWRGQADSLSETTKMMLL 380 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-----GKE 419 +GTY+ ++ +Y +A I I + A D++L PTTP A PL +E Sbjct: 381 LGTYI-NNTFGPRYYGKAVNISRRITAAYDHALAN-FDLLLMPTTPMKATPLPAPNAPRE 438 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 E + I N T ++ PA+S+P + + +P+GL L+G+ F E T++ Sbjct: 439 EVIGRAFEMISN---TAPFDITHHPAMSIPCGMAD-GLPVGLMLVGKHFDEPTIYRAAHA 494 Query: 480 IEK 482 ++ Sbjct: 495 FQQ 497 >gi|167851097|ref|ZP_02476605.1| indole acetimide hydrolase [Burkholderia pseudomallei B7210] Length = 442 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 20 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 79 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 80 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 134 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 135 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 193 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 194 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 239 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 240 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 290 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 291 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 346 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 347 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 405 Query: 453 CEK-KMPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 406 SKHTSVPVGLMLEGPAGNDRRLLAIAREVER 436 >gi|330971440|gb|EGH71506.1| amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 512 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 127/438 (28%), Positives = 200/438 (45%), Gaps = 41/438 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD G+ A ++I + P +++ V +++ + G + GK + + Sbjct: 94 LAGRTIAIKDSIPVAGLPMLAGANIFTDYIPDFDAEVVKRILNAGGTIAGKAHCEYLCFS 153 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA-----SIGTDTGGSIR 185 S+ TS G + +PW S S++ + FL A ++G D GSIR Sbjct: 154 GSSHTSVAGVIPNPWNETRSAG----------GSSSGSAFLVATGEVDMAMGADQAGSIR 203 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF+G VG+KPTYG G+ S S D G +T TV D+A+LL IAG D DA Sbjct: 204 MPASFSGIVGLKPTYGLVPYTGVPSLDASFDHVGPMTATVSDAALLLSVIAGPDGVDARQ 263 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + DY+ A+ + G+ +G+ KE + + P + ++ L GA +VE+S+ Sbjct: 264 HGVAPADYDAAMALPLNGLRIGVLKEGFEVPGSDPLVSARVREAADVLAKLGAALVELSI 323 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE-----V 359 P ++ L + + + + +G +G+ + + + G G E + Sbjct: 324 PMHRHGLDIWTTVGWTGMTETALKTNG--FGIMRNDHYPVSLMKWVHDHGAGIEQAPPSI 381 Query: 360 KHRIMIGTYV---LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 K I YV + Y + AR +RT + EA + VD++L PTTP +A PL Sbjct: 382 KLFFFISEYVRKQIGCVGYGNGINAARVLRT----KYDEALKH-VDLLLMPTTPMTATPL 436 Query: 417 GK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 EE S N T +M PA+S+P MP+G+ L+G+ + E Sbjct: 437 PDASTSIEEELKTSHPMALN---TAPFDMTHHPALSLPCGGI-NGMPVGMMLVGRHYDES 492 Query: 472 TLFSVGQIIEKEA-GYFR 488 TLF G+ E G FR Sbjct: 493 TLFRAGKAFEATGEGAFR 510 >gi|268317753|ref|YP_003291472.1| Amidase [Rhodothermus marinus DSM 4252] gi|262335287|gb|ACY49084.1| Amidase [Rhodothermus marinus DSM 4252] Length = 473 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 135/467 (28%), Positives = 208/467 (44%), Gaps = 33/467 (7%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIG 77 +++ AVE+V +++ IE N +NA + + A A AAA D+R+ G+ L G+P+ Sbjct: 18 REVRAVEVVTHFLERIEALNPAINAVVTLDADGALAAARMVDERLDRGETFGPLAGVPVT 77 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD TKG+ T S +L P ++ + ++L G +LGK N EF E Sbjct: 78 IKDLTETKGLRTTYGSALLRDHVPDVDAVLVERLRRAGLPILGKTNTPEFGGKFDTENRL 137 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW+ +D + PGGSSGG++A VA L + G D GGSIR PAS G G+K Sbjct: 138 FGATRNPWK-LDHS----PGGSSGGAAAQVAAGLGPIAHGNDGGGSIRVPASCCGVFGLK 192 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P +GR +L+ G I R+VRD+A LL +AG D D + PVP + A Sbjct: 193 PQFGRVPFWPRQDSWATLNHEGPIARSVRDAAALLDLMAGPDPRDPYSLPGPVPSFLDAC 252 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ V + P + + +D G + E S + Sbjct: 253 EGDVRGLRVAWSPTPGYGRIDPEVQALCEAAARTFEDLGCHVEEAS----------AGLD 302 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 PAEA L + ++ E GF +++ M+ ++ + + Sbjct: 303 FPAEAF------------LGIIVPRMVTQLERDLPPGFVEQLDP--MLAVFLPYADQLSA 348 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPT---TPTSAFPLGKEENNSGSMGHIYNDVF 434 + + L D EAF Q D+ L P P + G E + F Sbjct: 349 RDVARAEFARLQLYDRVEAFLQRYDLWLLPVMAAPPHRSGAFGPTEIAGRPVDSPLEPFF 408 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T N+ G PA SVPA +P+GLQ++G+ F E T+ E Sbjct: 409 TFPFNLTGHPAASVPAGFTRDGLPVGLQIVGRRFAETTVLRAAACYE 455 >gi|328464326|gb|EGF35745.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Lactobacillus rhamnosus MTCC 5462] Length = 209 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 96/204 (47%), Positives = 130/204 (63%), Gaps = 6/204 (2%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++LRS +++ +LVD + I+ + ++ A++ V A A+ A D+ I D + L Sbjct: 12 HEQLRSGKLTSRQLVDETLAGIDKIDPEVAAFLAVNADGAKKQAAAIDEAGI-ADDQPLS 70 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+PI IKD TKG+ T A S IL+ F P Y++TV QKL GA+ +GK N+DEFAMGSS Sbjct: 71 GVPIAIKDNIVTKGVVTTAASKILENFNPIYDATVMQKLAAAGAINVGKTNLDEFAMGSS 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S + + W PGGSSGGS+AAVA A++G+DTGGSIRQPA+F G Sbjct: 131 TENSAFKTTKNAWDH-----SRVPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPAAFNG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLD 216 VG KPTYGR SR G+I+F+ SLD Sbjct: 186 IVGFKPTYGRVSRWGLIAFSSSLD 209 >gi|53716387|ref|YP_105169.1| indole acetimide hydrolase [Burkholderia mallei ATCC 23344] gi|229008324|ref|YP_991153.2| indole acetimide hydrolase [Burkholderia mallei SAVP1] gi|229778988|ref|YP_001025544.2| indole acetimide hydrolase [Burkholderia mallei NCTC 10229] gi|52422357|gb|AAU45927.1| indole-3-acetamide hydrolase-related protein [Burkholderia mallei ATCC 23344] Length = 467 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 227/478 (47%), Gaps = 44/478 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + + + A+E ++ ++ + + A V + AR AA D +I +G L G Sbjct: 19 DAVNGRRVRALEQAEAALERLALVEP-LAAMTHVAPEIARRAAANVDAQIASGRRLPLAG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T+A S L GF +T Q+L D GAV LGK NM E A G ++ Sbjct: 78 VPFVIKDNLFTADMPTRAASPALLGFDATRNATAVQQLLDAGAVPLGKANMHELAFGITS 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y+G V +P GGSSGG++ AVA + A +GTDTGGS+R PA+F G Sbjct: 138 ANGYFGAVRNPHDPARIA-----GGSSGGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGV 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++PT R S G+++ +P+ D G I + D +L + G DA P P Sbjct: 192 AGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTG----DA---GEPAP-- 242 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ G+ VG+P D L P + + ++ ++ L DAGA+++ ++ A Sbjct: 243 -----VALAGLRVGVPDAPYFDGLDPAVAELTERALAALTDAGARLIPLA---------A 288 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + EA +A ++ + Y R + + L E +G +V+H + ++ Sbjct: 289 HALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLG-SDDVRHLFRM---LID 344 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN---SGSMG 427 + Y A + R + +AF + GVD I PT A PL + + S + Sbjct: 345 APPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAY 403 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 ++ V T + G+P++S+PA L + +P+GL L G + L ++ + +E+ Sbjct: 404 ALFARVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 461 >gi|121225509|gb|ABM49040.1| indole-3-acetamide hydrolase-related protein [Burkholderia mallei SAVP1] gi|261826709|gb|ABN00057.2| indole-3-acetamide hydrolase-related protein [Burkholderia mallei NCTC 10229] Length = 548 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 227/478 (47%), Gaps = 44/478 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + + + A+E ++ ++ + + A V + AR AA D +I +G L G Sbjct: 100 DAVNGRRVRALEQAEAALERLALVEP-LAAMTHVAPEIARRAAANVDAQIASGRRLPLAG 158 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T+A S L GF +T Q+L D GAV LGK NM E A G ++ Sbjct: 159 VPFVIKDNLFTADMPTRAASPALLGFDATRNATAVQQLLDAGAVPLGKANMHELAFGITS 218 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y+G V +P GGSSGG++ AVA + A +GTDTGGS+R PA+F G Sbjct: 219 ANGYFGAVRNP-----HDPARIAGGSSGGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGV 272 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++PT R S G+++ +P+ D G I + D +L + G DA P P Sbjct: 273 AGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTG----DA---GEPAP-- 323 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ G+ VG+P D L P + + ++ ++ L DAGA+++ ++ A Sbjct: 324 -----VALAGLRVGVPDAPYFDGLDPAVAELTERALAALTDAGARLIPLA---------A 369 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + EA +A ++ + Y R + + L E +G +V+H + ++ Sbjct: 370 HALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLG-SDDVRHLFRM---LID 425 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN---SGSMG 427 + Y A + R + +AF + GVD I PT A PL + + S + Sbjct: 426 APPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAY 484 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 ++ V T + G+P++S+PA L + +P+GL L G + L ++ + +E+ Sbjct: 485 ALFARVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 542 >gi|238563909|ref|ZP_00438056.2| indole acetimide hydrolase [Burkholderia mallei GB8 horse 4] gi|238519708|gb|EEP83176.1| indole acetimide hydrolase [Burkholderia mallei GB8 horse 4] Length = 505 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 227/478 (47%), Gaps = 44/478 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + + + A+E ++ ++ + + A V + AR AA D +I +G L G Sbjct: 57 DAVNGRRVRALEQAEAALERLALVE-PLAAMTHVAPEIARRAAANVDAQIASGRRLPLAG 115 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T+A S L GF +T Q+L D GAV LGK NM E A G ++ Sbjct: 116 VPFVIKDNLFTADMPTRAASPALLGFDATRNATAVQQLLDAGAVPLGKANMHELAFGITS 175 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y+G V +P GGSSGG++ AVA + A +GTDTGGS+R PA+F G Sbjct: 176 ANGYFGAVRNPHDPARIA-----GGSSGGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGV 229 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++PT R S G+++ +P+ D G I + D +L + G DA P P Sbjct: 230 AGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTG----DA---GEPAP-- 280 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ G+ VG+P D L P + + ++ ++ L DAGA+++ ++ A Sbjct: 281 -----VALAGLRVGVPDAPYFDGLDPAVAELTERALAALTDAGARLIPLA---------A 326 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + EA +A ++ + Y R + + L E +G +V+H + ++ Sbjct: 327 HALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLG-SDDVRHLFRM---LID 382 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN---SGSMG 427 + Y A + R + +AF + GVD I PT A PL + + S + Sbjct: 383 APPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAY 441 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 ++ V T + G+P++S+PA L + +P+GL L G + L ++ + +E+ Sbjct: 442 ALFARVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 499 >gi|242313159|ref|ZP_04812176.1| amidase family protein [Burkholderia pseudomallei 1106b] gi|242136398|gb|EES22801.1| amidase family protein [Burkholderia pseudomallei 1106b] Length = 500 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 78 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 137 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 138 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 192 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 193 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 251 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 252 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 297 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 298 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 348 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 349 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 404 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 405 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 463 Query: 453 CEK-KMPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 464 SKHTSVPVGLMLEGPAGNDRRLLAIAREVER 494 >gi|228993428|ref|YP_001063986.2| indole acetimide hydrolase [Burkholderia pseudomallei 668] gi|283775140|gb|ABN86235.2| amidase family protein [Burkholderia pseudomallei 668] Length = 467 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 136/478 (28%), Positives = 226/478 (47%), Gaps = 44/478 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + + + A+E ++ ++ + + A V + AR AA D +I +G L G Sbjct: 19 DAVNGRRVRALEQAEAALERLALVEP-LAAMTHVAPEIARRAAANVDAQIASGRRLPLAG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T+A S L GF +T Q+L D GAV LGK NM E A G ++ Sbjct: 78 VPFVIKDNLFTADMPTRAASPALLGFDATRNATAVQQLLDAGAVPLGKANMHELAFGITS 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y+G V +P GGSSGG++ AVA + A +GTDTGGS+R PA+F G Sbjct: 138 ANGYFGAVRNPHDPARIA-----GGSSGGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGV 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++PT R S G+++ +P+ D G I + D +L + G DA P P Sbjct: 192 AGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTG----DA---GEPAP-- 242 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ G+ VG+P D L P + + ++ + L DAGA+++ ++ A Sbjct: 243 -----VALAGLRVGVPDAPYFDGLDPAVAELTERAFAALTDAGARLIPLA---------A 288 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + EA +A ++ + Y R + + L E +G +V+H + ++ Sbjct: 289 HALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLG-SDDVRHLFRM---LID 344 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN---SGSMG 427 + Y A + R + +AF + GVD I PT A PL + + S + Sbjct: 345 APPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAY 403 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 ++ V T + G+P++S+PA L + +P+GL L G + L ++ + +E+ Sbjct: 404 ALFTRVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 461 >gi|260813969|ref|XP_002601688.1| hypothetical protein BRAFLDRAFT_94568 [Branchiostoma floridae] gi|229286990|gb|EEN57700.1| hypothetical protein BRAFLDRAFT_94568 [Branchiostoma floridae] Length = 535 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 119/425 (28%), Positives = 205/425 (48%), Gaps = 24/425 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + IKD A G+ S +L+G+ P Y++T+ ++ D G ++ GK ++ M Sbjct: 116 LQGKTVAIKDNVAVAGVPMMNGSRVLEGYIPEYDATIVTRILDAGGIIKGKSVCEDLCMS 175 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ TS GPV++ + D+T + G+ A+ A IG D GGSIR PA++ Sbjct: 176 GSSFTSATGPVLN---AHDNTRSSAGSSTGSGTLLALKEVDLA--IGGDQGGSIRLPAAW 230 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC--DATCVNL 248 +G VG KPT+G G + ++D G + RTV D+A++L+ +AGYD+ NL Sbjct: 231 SGVVGHKPTHGLVPYTGCVPMDITIDHIGPMARTVADTALMLEVLAGYDDGLDPRQPPNL 290 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVEISLP-H 306 VP+Y L + GM VG+ +E S +D ++ L AGA + E+S+P H Sbjct: 291 TVPEYTSQLTGDLSGMRVGLLREGFGQVTSEDDVDDMVREAAHKLTSAGATVEEVSVPLH 350 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR----VEGKDILEMYENTRSIGFGQEVKHR 362 + ++ + + DGV G + D L N+R+ +K Sbjct: 351 YPDGTHIWNAVAVQGCTQIMVEGDGVGVGSKGFYPTSMVDALARGYNSRANDMSVTLKLL 410 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 ++G Y+ + + +Y + + + + + + EA + DV++ PT P L E+ + Sbjct: 411 TLLGEYI-NENYGNRYYAKGQNLGRTLTKAYNEALDTH-DVLIMPTVPYKPVKLPDEDAS 468 Query: 423 SGSMGH-----IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 M H I+N T N+ G P +S+ A + +P+G+ ++G+ F + T+ V Sbjct: 469 ISEMCHQALGLIHN---TCPFNVTGHPGLSINAGFSQ-GLPVGMMIVGRHFDDATVLKVA 524 Query: 478 QIIEK 482 EK Sbjct: 525 HAFEK 529 >gi|226830794|ref|YP_001076907.2| indole acetimide hydrolase [Burkholderia pseudomallei 1106a] gi|210148329|gb|ABN94853.2| amidase family protein [Burkholderia pseudomallei 1106a] Length = 467 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 133/451 (29%), Positives = 215/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 45 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 105 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 159 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 160 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 218 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G DA P P ++ G+ VG+P D L P Sbjct: 219 IAHGIDDLLLLDAVLTG----DA---GEPAP-------VALAGLRVGVPDAPYFDGLDPA 264 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 265 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 315 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 316 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 371 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 372 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 430 Query: 453 CEK-KMPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 431 SKHTSVPVGLMLEGPAGNDRRLLAIAREVER 461 >gi|261822711|ref|YP_003260817.1| amidase [Pectobacterium wasabiae WPP163] gi|261606724|gb|ACX89210.1| amidohydrolase, AtzE family [Pectobacterium wasabiae WPP163] Length = 465 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 142/490 (28%), Positives = 231/490 (47%), Gaps = 55/490 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 +++ + + LR+ SA EL + AIE +N +NAY V +++ A AE D R Sbjct: 12 LSIRQIQQGLRAGTFSAKELAQQALAAIEQTNPTINAYTHVTSERMLAEAEHIDACRQCG 71 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNM 124 L G+P +K+ F G T A + +L P + ++L GA++ G LNM Sbjct: 72 ETLPALAGVPYAVKNLFDVSGETTLAGAELLSKRPPAAQDAFAIRQLASQGALLSGMLNM 131 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D +A G + E S+YGP +P +D+ + GGSSGGS+AAVA L ++G+DT GSI Sbjct: 132 DAYAYGFTTENSHYGPTRNP---LDT--QRIAGGSSGGSAAAVAAGLVNFTLGSDTNGSI 186 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P+S G G+KPT+GR SR G F SLD G R+V D A++ A+ G D+ D Sbjct: 187 RVPSSLCGIFGLKPTFGRLSRHGSHPFVASLDHIGPFARSVDDLALVFDALQGRDKHDRF 246 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 L+ G+ + LD Y S + + + + A ++ Sbjct: 247 QAERETQHTAEQLETGSDGLRYAV-----LDGYFSTWSSEEAKTAVCQIAQALGVQDSLT 301 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKH 361 L A A +I+S +E G +Y LR + + F + Sbjct: 302 LTDAALARSAAFILSASEG--------GNQYLPDLRTQPER------------FELLSRE 341 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-- 419 R++ G + + + Y++A++ R ++ FE D+++ P TP SA +G+E Sbjct: 342 RLLAGAMIPA-----AWYVQAQRFRNYFRQQTLALFEH-TDLLIAPATPCSATLIGQEIM 395 Query: 420 -ENNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 N++ SMG + T ++ GLP ++VP A +P+G+Q+I P+RE+ Sbjct: 396 RINDTDLPVRASMG-----MLTQPISFVGLPVVTVPVA-TASGLPIGIQIIAAPWREDLC 449 Query: 474 FSVGQIIEKE 483 +E++ Sbjct: 450 LRTAWALEQQ 459 >gi|167908035|ref|ZP_02495240.1| indole acetimide hydrolase [Burkholderia pseudomallei NCTC 13177] Length = 447 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 25 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFG 84 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 85 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 139 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 140 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 198 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 199 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 244 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 245 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 295 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 296 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 351 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 352 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 410 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 411 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 441 >gi|167899727|ref|ZP_02487128.1| indole acetimide hydrolase [Burkholderia pseudomallei 7894] gi|167924241|ref|ZP_02511332.1| indole acetimide hydrolase [Burkholderia pseudomallei BCC215] Length = 447 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 25 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 84 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 85 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 139 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 140 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 198 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 199 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 244 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 245 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 295 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 296 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 351 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 352 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 410 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 411 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 441 >gi|300718094|ref|YP_003742897.1| Amidase [Erwinia billingiae Eb661] gi|299063930|emb|CAX61050.1| Amidase [Erwinia billingiae Eb661] Length = 474 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 133/490 (27%), Positives = 229/490 (46%), Gaps = 54/490 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEG 73 +R K +S VE+V + + ++ +++A+ A A A+ +++I+ G+ L G Sbjct: 11 HIRDKSLSPVEVVTASLARMDLLEPELHAFCTPTPDLAMAQAKAIEQKILRGEKVGPLAG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD +T GI T + S I + F P + ++L GA++LGK N EF + Sbjct: 71 VPVAIKDLISTAGIKTVSGSWIYENFIPDEDDITVERLKAAGAIILGKTNAPEFGYSGTG 130 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +PW + TPGGSS GS+AA+A +C ++G+D GGS+R PA+ +G Sbjct: 131 HNPVFPTTRNPWNT-----DLTPGGSSAGSAAALAARMCPLALGSDGGGSVRIPAAHSGL 185 Query: 194 VGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 G+K + GR R +S SL+ G +TRTV D+A++L IAG D D Sbjct: 186 FGMKASMGRVPLYPGCRDERFPGLSSWESLEHIGPMTRTVADAALMLSVIAGPDPRDRHS 245 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS-----WLKDAGAKIV 300 + D+ A S++G+ + + D+ +D+ ++ ++ + ++ G +V Sbjct: 246 IPTSDIDWLNAPKGSLKGLRIA----FSADWGYAAVDQQVREVVAKAVRVFERELGCIVV 301 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E A P + P E + L + G+R ++E Y + S Sbjct: 302 E--------AHPGFS--DPKETFAALVAQETDLTGMR----KLMESYGDRMS-------P 340 Query: 361 HRI-MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H + M+ T + D++ R + + + F QG D++LTPT T FP+ E Sbjct: 341 HLVAMLNTDWTAEMFTDANMKRKEVVNKMWR------FMQGYDLLLTPTLATPPFPIDIE 394 Query: 420 EN---NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + S+ F +N+ G PA SVPA +P+GLQ++G+ + + Sbjct: 395 SPAMIDGRSVTPAEWLAFVFPINLTGQPAASVPAGFTADGLPVGLQIVGRHLDDALVLRA 454 Query: 477 GQIIEKEAGY 486 EK G+ Sbjct: 455 SAAFEKVCGW 464 >gi|108804536|ref|YP_644473.1| amidase [Rubrobacter xylanophilus DSM 9941] gi|108765779|gb|ABG04661.1| Amidase [Rubrobacter xylanophilus DSM 9941] Length = 506 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 128/429 (29%), Positives = 211/429 (49%), Gaps = 26/429 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ S L+G+ P +++T+ ++ D G + GK + Sbjct: 88 LAGKRVAVKDNVAVAGVPMMNGSATLEGYVPEFDATIVTRILDAGGEISGKAVCEHLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV++P D T GSS GS+A VA +IG D GGSIR P+ + Sbjct: 148 GGSHTSDTGPVLNP---HDRTRSAG--GSSSGSAALVAAGEVEMAIGGDQGGSIRIPSCW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 GT G+KPTYG G+ +LD G I +V D A+LL AIAG D D + V Sbjct: 203 CGTYGLKPTYGLVPYTGVFPIELTLDHVGPIAASVSDVALLLSAIAGEDGLDPRQREVRV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY+ AL++ ++G+ +G+ E + L LS +D+T ++ ++ GA++ E+S+P + Sbjct: 263 GDYQNALERGVEGVRIGVVAEGFSLPSLSEEDVDETVRRAADTFRELGAEVQEVSIPLHR 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGK---DILEMYENTRSIGFG---QEVKHR 362 + + I+ A+ + R +G+ G EG +L+ Y R+ G + VK Sbjct: 323 DGIHIWNAIAIEGATELMVRGNGM--GTNWEGHYSTSLLDAYWRGRTALAGELSETVKLT 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-----G 417 ++ G Y+ Y Y + R +A + D++L PT P A + Sbjct: 381 MLTGQYM--REAYGGRYYARARNLARRLRAAYDAALERADLLLMPTLPMKATKIPAPDAP 438 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +EE + ++ I N T +++G PA++VP E +P+G+ L+G+ + EET+ Sbjct: 439 REEVVARALEMIPN---TCPFDVSGHPAMNVPCGTSE-GLPVGMMLVGRKWDEETVLRAA 494 Query: 478 QIIEKEAGY 486 + EK Y Sbjct: 495 RAFEKTGAY 503 >gi|229184297|ref|ZP_04311504.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BGSC 6E1] gi|228599093|gb|EEK56706.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BGSC 6E1] Length = 493 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 150/502 (29%), Positives = 227/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAETLDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV+LGK Sbjct: 75 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKT 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D D GGSS GS+ AVA S+G Sbjct: 135 NMTELANAMSFEMWAGYSARGGQTINPYGTGD--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + PDY + LD + G +G+ PKEY Y + D K +++ Sbjct: 253 VDEKDVATHKSEGIGEPDYTKYLDVNGLNGTKIGVYNNAPKEY---YETGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLHSKGATVVEDIHIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 416 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 461 ITLASTAFSEGTLIKLAYAFEQ 482 >gi|224369423|ref|YP_002603587.1| GatA1 [Desulfobacterium autotrophicum HRM2] gi|223692140|gb|ACN15423.1| GatA1 [Desulfobacterium autotrophicum HRM2] Length = 584 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 126/480 (26%), Positives = 218/480 (45%), Gaps = 56/480 (11%) Query: 24 VELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIK 79 VE+ + A++ +N++ MN +I + + A+ S +RI +G + L +G+P+ +K Sbjct: 137 VEVASKIVNAVDKNNAEPQSMNIFIAMDRKDLMVQAQASKQRIDHGTSLGLFDGVPVAVK 196 Query: 80 DCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F T + L G +P E +TV +L GA+++GK NM E + + ++ Sbjct: 197 DEFDQVPYPTTVGTSFL-GKKPAIEDATVVARLRSQGALLVGKANMHEIGINPNGLNVHF 255 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G V +P+ +D GGSS G +AAVA L +IG D GGSIR PA + G +G+KP Sbjct: 256 GAVRNPYH-LDHD----AGGSSSGPAAAVALGLVPVAIGADGGGSIRVPAGYCGVLGLKP 310 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T+GR S G S+ AG I TV D + +AG D D + P + + Sbjct: 311 TFGRVSEHGAAPLCWSVGHAGPIADTVADLVLAYSVVAGRDPRDKRSLVQPQVTVQGWDN 370 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + G+ +G+ ++ P + + K AGA++ I + A+ I+ Sbjct: 371 ADLTGLRIGVFNDWNHHSDGPC-SNSCDHMVEQFKGAGARVKAIEIAELDAMRVAHSILI 429 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 +E ++ ++ Y ++ + +G G + L+ + Sbjct: 430 LSEMAAAMSAYK-----------------KHLKKMGAGVRIN-------LSLARLLRATD 465 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--FPLGKE-------ENNSGSMGHI 429 Y+ A+++RT + F F+ VD I++P + T P G E N GSM ++ Sbjct: 466 YVNAQRMRTRAIKIFNTVFKT-VDAIVSPGSATVVPRIPQGFETAGWSAISNELGSMRYV 524 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ----IIEKEAG 485 + N+ G PAI+ P +PLG+ + P++E LF + ++E+ G Sbjct: 525 F------PANLTGFPAITFPGGYDNNGLPLGIHAMASPWQETLLFRLASAAEAVVERRNG 578 >gi|50084778|ref|YP_046288.1| amidase [Acinetobacter sp. ADP1] gi|49530754|emb|CAG68466.1| amidase [Acinetobacter sp. ADP1] Length = 504 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 124/428 (28%), Positives = 210/428 (49%), Gaps = 26/428 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I +KD + S L+GF P Y++T+ ++ D GA +LGK + F + Sbjct: 88 LSGKTIALKDNIFLADVPMMNGSTTLEGFVPEYDATIVTRMLDAGATILGKATCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS V +P+R ++ GGSS GS+A V+ +I D GGSIR PA+F Sbjct: 148 GGSHTSDPVAVHNPYRH-----GYSAGGSSSGSAALVSNGDVDLAIACDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G GI+ ++D G ++RTVRD+A+LL+ IAG D D ++ Sbjct: 203 CGIYGMKPTHGLVPYTGIMPIENTIDHVGPVSRTVRDNALLLEVIAGGDGLDPRQYHVKT 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY LD+ ++G+ +G+ +E + L + P + + ++ I + GA + +ISLP Sbjct: 263 EDYTSYLDRGVKGLKIGVVREGFNLANMDPKVAEKVRKAIVEFEKMGAIVEDISLPEHAL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIG--FGQEVKHRIMIG 366 A + + ++ + +G+ + + G +++ +++ R +K + +G Sbjct: 323 AGALWSPVGCEGLTAQMMHGNGMGFNWEGLYGVKLIDKHKDWRKQADQLSPTLKACMFVG 382 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPTSAFPLGK----- 418 Y + + Y Y K I R A++Q + D++L PT P A PL + Sbjct: 383 EYGIKN--YSGRYYAKSKN---ITRRARAAYDQKLAEYDLLLMPTVPMVAQPLPEPGCSL 437 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E S + I N T + ++ G PA+S+P L + +P+GL LIG F E ++ Sbjct: 438 TEYISKAFEMIGN---TASQDITGHPAMSIPCGLVD-DLPVGLMLIGPYFGEGKIYQAAA 493 Query: 479 IIEKEAGY 486 EK + Sbjct: 494 AFEKNVDW 501 >gi|221209794|ref|ZP_03582775.1| amidase family protein [Burkholderia multivorans CGD1] gi|221170482|gb|EEE02948.1| amidase family protein [Burkholderia multivorans CGD1] Length = 494 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 217/492 (44%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A A + D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNAIVALRERDALLAEAADKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ R L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYRGWLHGMPQAPKDLAMTKGLVTTYGSRIFSDHVPQADSVGVARMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS YG +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNDVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G +P+ GR R G+ + L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGFRPSQGRVPRWPGVDVYMQQLGIEGPMGRTVGDVAQLLAIQAGYDPNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + + L+ ++G + ++ YL+ P + +QG++ L+D G + Sbjct: 257 LSLADDPAVFAQPLETDLKGTRIAWVGDWN-GYLATEPGVLAQCEQGLATLRDIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APERIWRLWLAHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + +++ F + D I PT FP E+ Sbjct: 360 YEVEGLLAMQGAAVFDASVERTAWHQAVLR------FFERYDFIAAPT--AQVFPFDVEQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P ISVP E +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNEAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYERAADW 483 >gi|163797261|ref|ZP_02191215.1| Amidase [alpha proteobacterium BAL199] gi|159177556|gb|EDP62110.1| Amidase [alpha proteobacterium BAL199] Length = 461 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 138/475 (29%), Positives = 212/475 (44%), Gaps = 42/475 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 LR I+A E D+ + I N +++A+ V A +AR AA D+ + G D L G+ Sbjct: 20 LRGGRITAAEATDACLARIAALNPKLDAFQLVDADRARQAARAVDEMLAAGTDLGPLMGV 79 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD A G+ T S E + L +G ++LGK EFA+G++ Sbjct: 80 PIAVKDIIAVDGLPTTNGSLYPSAELTGPEGPLIGHLKASGCIILGKTKTVEFALGATGV 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +PW DS+ PGGSS GS+ AVA +C ++GTDTGGSIR PASFTG Sbjct: 140 NEARG---TPWNPWDSSVHRIPGGSSSGSAVAVASGMCGFALGTDTGGSIRIPASFTGLF 196 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G K T G G+ +P+LD G + R+ D+A++ + G +LP+P Sbjct: 197 GHKTTVGLWPTDGVFPLSPTLDSIGPLCRSAGDAALIHAIVTGE--------SLPMP--- 245 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + G+ +G P + D L T T + + L AG +IV+I +P + + Sbjct: 246 ----TRLAGLKLGRPTNFFFDELDDTTRSTVEAALLALSAAGVEIVDIEIPEVEERARIF 301 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I PAE + L + K ++ R+ G EV S+ Sbjct: 302 AAIVPAELVARLTPEGFAK------AKPKMDPVTGMRA-AHGLEV-----------SAIE 343 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 Y S R R++ + F G+D + P+TP A P+ ++ + + + Sbjct: 344 YASAQFRLRELEEIADEHF-----DGLDGWIAPSTPFVAMPVDTLKHADVAKRAMLSSRN 398 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 T N+ G+ A S+P +P+GLQL+ + L S+ E G P Sbjct: 399 TQPANIFGICAASLPIQQFGAPLPVGLQLMAPRGEDARLLSMAMAFEPVLGVGTP 453 >gi|187476799|ref|YP_784823.1| amidase [Bordetella avium 197N] gi|115421385|emb|CAJ47890.1| putative amidase [Bordetella avium 197N] Length = 469 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 138/495 (27%), Positives = 229/495 (46%), Gaps = 47/495 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + F +SE L S+VEL ++ IE +N +NA+ V + A AE +D Sbjct: 1 MSHIAFATLSELALGLSEGRYSSVELARYFLDRIERANPVLNAFASVDREGALRLAEAAD 60 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R +G L+G+PI +KD +G T S R +T +L D G V+ Sbjct: 61 ARRRSGYGLLSPLDGLPIAVKDLCDIEGQITTGGSAAWRQRRSEVTATAVTRLLDAGMVI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK M EFA G G +PW D PGGSS GS AVA L A++G+ Sbjct: 121 LGKTQMVEFAFGGWGTNPLLGTPRNPW---DMQHARIPGGSSSGSGVAVAAGLVPAALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA+ G G+K T G S G + + SLD G +TR RD+ +L +AG Sbjct: 178 DTGGSVRIPAALNGVTGLKTTRGLISLYGAVPLSTSLDSIGPLTRDTRDAMLLTAVLAGP 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGI--PKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D ++ P + A S++GM + + P ++ L + T+ + +++ L++ G Sbjct: 238 DARDPLTLHQPA-FHCPAPGGSLRGMRIAMMSPTQFPLPIEADTL-QAFEEACRVLQNLG 295 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG--LRVEGKDILEMYENTRSIG 354 A+I +LP + + +R G + E + Y + Sbjct: 296 AEIQHPALPFDFHEM-------------------MLRNGQIIAAESYALHRSYIEDMELP 336 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPT 411 G V+ R++ G + + + Y+ A + ++ + +A++ + D ++TP P Sbjct: 337 IGPHVRARVLNGKQIGA-----ADYIEALQAQS----EACQAWQSWIADFDALITPCLPI 387 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A + + + S + FT N P +++PA + +P+G+QL+G PF E+ Sbjct: 388 AACRVEEADELSTPLA-----AFTRPGNYMNAPGLALPAGFSSEGLPIGVQLMGAPFAED 442 Query: 472 TLFSVGQIIEKEAGY 486 L +G ++E + Sbjct: 443 RLGRIGMSFQQETDW 457 >gi|167744074|ref|ZP_02416848.1| indole acetimide hydrolase [Burkholderia pseudomallei 14] Length = 442 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 20 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 79 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 80 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 134 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 135 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 193 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 194 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 239 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 240 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 290 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 291 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 346 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 347 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFARVIRQTGPATLGGVPSVSIPAGL 405 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 406 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 436 >gi|221635867|ref|YP_002523743.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Thermomicrobium roseum DSM 5159] gi|221158005|gb|ACM07123.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Thermomicrobium roseum DSM 5159] Length = 494 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 142/506 (28%), Positives = 236/506 (46%), Gaps = 59/506 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +M+ +E +R + +S VE+VD++I IE N +NA++ +AR A ++++ Sbjct: 6 ELAYMSATELALHIRRRQLSPVEVVDAFITRIEQRNPSLNAFVYFGFDEARQRARDAEQA 65 Query: 63 IINGDAR-DLEGIPIGIKDCFATK--------GIHTQACSHILDGFRPHYESTVTQKLWD 113 ++ GD L G+P IKD F K GI H+++ + +++ Sbjct: 66 VLRGDPLGPLHGVPTAIKDLFDFKPGWKSTFGGIRALK-DHVVNAY-----CLFAERVER 119 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA++LGK N + + +GP +P+ +T SSGGS+AAVA L Sbjct: 120 AGAIVLGKTNSPVMGFRGTCDNYLFGPSRNPFDLRRNTGG-----SSGGSAAAVADGLVP 174 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGR---CSRLGIISFAPSLDQAGIITRTVRDSAI 230 + GTD GGSIR PA++ G G K ++GR +R + G ITRTV D+A+ Sbjct: 175 FAEGTDGGGSIRIPAAWCGVYGYKASFGRVPFVARPNAFAGDTPFLFEGPITRTVEDAAL 234 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +L AIAGYD D ++ V D+ A +SI G +G + + + P + + + Sbjct: 235 VLSAIAGYDPRDPFALDEQV-DFLAATRRSIHGWRIGYSPNFDVFPVEPEVATVVSRAVR 293 Query: 291 WLKDAGAKI--VEISLPHTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEM 346 ++AGA + V I + +Q L + +I P NL D G +G D+L Sbjct: 294 AFEEAGATVEEVRIGITRSQRELSDLWCRLIMPI----NLLTLD----GFAAQGIDLLGE 345 Query: 347 YENTRSIGFGQEV-KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 + + + + V K R M +C IR+ + FE+ D+++ Sbjct: 346 HRDDFPPQYLEWVEKTRSMTALDFYRDQC----------IRSEVYDAIQSVFER-YDLLV 394 Query: 406 TPTTPTSAFP---------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK 456 TPT + P +G + N S+ + T VN +G PA S+PA L Sbjct: 395 TPT--LACLPVENADDGNTVGPSQVNGESVDPLIGWCLTYPVNFSGHPAASIPAGLSASG 452 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEK 482 +P+GLQ+IG+ + + + + + E+ Sbjct: 453 LPVGLQIIGRRYADADVLTASAVFER 478 >gi|134278756|ref|ZP_01765470.1| amidase family protein [Burkholderia pseudomallei 305] gi|134250540|gb|EBA50620.1| amidase family protein [Burkholderia pseudomallei 305] Length = 558 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 136 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 195 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 196 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 250 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 251 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 309 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 310 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 355 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 356 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 406 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 407 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 462 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 463 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 521 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 522 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 552 >gi|118477506|ref|YP_894657.1| amidase [Bacillus thuringiensis str. Al Hakam] gi|118416731|gb|ABK85150.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis str. Al Hakam] Length = 503 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 150/502 (29%), Positives = 227/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 25 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAETLDHERK 84 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV+LGK Sbjct: 85 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKT 144 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D D GGSS GS+ AVA S+G Sbjct: 145 NMTELANAMSFEMWAGYSARGGQTINPYGTGD--DDMFVGGSSTGSAIAVAANFTVVSVG 202 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 203 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 262 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + PDY + LD + G +G+ PKEY Y + D K +++ Sbjct: 263 VDEKDVATHKSEGIGEPDYTKYLDVNGLNGTKIGVYNNAPKEY---YETGEYDEKLFKET 319 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 320 IEVLHSKGATVVEDIHIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 375 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 376 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGI 425 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 426 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 470 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 471 ITLASTAFSEGTLIKLAYAFEQ 492 >gi|196046003|ref|ZP_03113231.1| amidase family protein [Bacillus cereus 03BB108] gi|196023058|gb|EDX61737.1| amidase family protein [Bacillus cereus 03BB108] Length = 491 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 150/502 (29%), Positives = 227/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV+LGK Sbjct: 73 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGD--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + PDY + LD + G +G+ PKEY Y + D K +++ Sbjct: 251 VDEKDVATHKSEGIGEPDYTKYLDVNGLNGTKIGVYNNAPKEY---YETGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLHSKGATVVEDIHIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQ 480 >gi|149913725|ref|ZP_01902257.1| Amidase [Roseobacter sp. AzwK-3b] gi|149812009|gb|EDM71840.1| Amidase [Roseobacter sp. AzwK-3b] Length = 470 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 136/490 (27%), Positives = 220/490 (44%), Gaps = 57/490 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLEG 73 +R++ IS E+ +++ IE N +NA + A +A A+ D+ I G R L G Sbjct: 19 IRARRISCREVTGAFLNKIETHNPAINAICTLDADRALDTADALDRDIAAGLGAGRSLMG 78 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI +KD T GI T S + + + P ++ + +L D GAV+LGK N EF + Sbjct: 79 LPIVLKDLTPTAGIRTTRGSRLFENWVPSEDAALVTRLKDQGAVVLGKTNTPEFGHKAIT 138 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + + +GP +PWR D+ G S G ++A A + A G+D GSIR PAS GT Sbjct: 139 DNAIFGPTANPWRR----DRIAGGSSGGSAAAVAAALVPFAE-GSDGAGSIRIPASICGT 193 Query: 194 VGIKPTYGRCSRLG--IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG KPT+GR + S P G I R+V D+ +L +A+ G +LPV Sbjct: 194 VGFKPTFGRVPDVAQSFFSHTPYFHN-GPIARSVADADLLYRAMLG--PSSGGIFSLPVE 250 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL---PHTQ 308 + + + V + L + I + ++G + G ++VE L P T+ Sbjct: 251 QPNGLAQKPLCDIRVAFSPDLGLFPVRADIVRACRKGAEVFETLGCQVVEADLTLPPDTE 310 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A + A+ G+ L D+LE ++ T Sbjct: 311 AAFLDLW----------RAKVAGLYGDLGAGDLDLLEP-----------------VVQTL 343 Query: 369 VLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM- 426 + R D + +A K R + + T F++ VD++L PTT +AF + + + Sbjct: 344 IEEGRAIDMVRFGKALKTRDRVWQAMTALFDK-VDILLCPTTCVTAF--SQSDGPPAKIA 400 Query: 427 GHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 G + N + T +NM G P ISVP LC++ +P+GLQ+ G+ ++ + + E Sbjct: 401 GQLVNPLIGWFLTYPMNMTGHPVISVPCGLCDEGLPVGLQIAGRRLEDDLVLRLAAHFEA 460 Query: 483 EAGYFRPHKW 492 H W Sbjct: 461 A------HPW 464 >gi|254194391|ref|ZP_04900823.1| amidase family protein [Burkholderia pseudomallei S13] gi|254300773|ref|ZP_04968217.1| amidase family protein [Burkholderia pseudomallei 406e] gi|157811006|gb|EDO88176.1| amidase family protein [Burkholderia pseudomallei 406e] gi|169651142|gb|EDS83835.1| amidase family protein [Burkholderia pseudomallei S13] Length = 454 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 130/451 (28%), Positives = 211/451 (46%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 32 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 91 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 92 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 146 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+ + +P+ D G Sbjct: 147 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVFALSPTRDTVGP 205 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 206 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 251 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 252 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 302 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 303 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 358 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 359 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 417 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 418 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 448 >gi|217422358|ref|ZP_03453861.1| amidase family protein [Burkholderia pseudomallei 576] gi|217394589|gb|EEC34608.1| amidase family protein [Burkholderia pseudomallei 576] Length = 551 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 133/451 (29%), Positives = 215/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 129 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 188 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 189 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNP-----HDPARIAGGSS 243 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 244 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 302 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G DA P P ++ G+ VG+P D L P Sbjct: 303 IAHGIDDLLLLDAVLTG----DA---GEPAP-------VALAGLRVGVPDAPYFDGLDPA 348 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 349 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 399 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 400 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 455 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 456 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 514 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 515 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 545 >gi|291616409|ref|YP_003519151.1| GatA [Pantoea ananatis LMG 20103] gi|291151439|gb|ADD76023.1| GatA [Pantoea ananatis LMG 20103] Length = 465 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 135/500 (27%), Positives = 231/500 (46%), Gaps = 54/500 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +SE++ A+ + +++ +ISA E+ + + AIE N Q+N + ++ + + A+ D Sbjct: 3 LSEVSIQALQQ---KIQQGEISAREVAEQTLTAIEKQNPQLNVWTDITSTRMLQEADAID 59 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAV 117 K+ + G+ L GIP +K+ F +G T A + + RP + ++ +L GA+ Sbjct: 60 KQRLRGEMLPPLAGIPYAVKNLFDVQGYSTLAGAELFRQ-RPAANRDAFAITQLQQAGAL 118 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + G +NMD +A G + E S+YG +P + + GGS+ +A + F S+G Sbjct: 119 LSGMVNMDAYAYGFTTENSHYGATRNP-HDLARIAGGSSGGSAAAVAAGLVPF----SLG 173 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDT GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G Sbjct: 174 TDTNGSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLLQG 233 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D DA + P L++ Q + + + S D + + A Sbjct: 234 KDSMDAFQADRPQAPTRPQLERGAQDLRCAVLG----GFFSTWCDHDARAAQIQIATALQ 289 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 E+ + + A A +I++ +E ++ LR + + F Sbjct: 290 ASEEVIMAEAELARSAAFIMTASEGGNHYLP------ALRQQPER------------FEP 331 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + R++ G + + Y++A++ R ++ FE+ DV++ P TP SA +G Sbjct: 332 HSRERLLAGAMLPG-----AWYVQAQRFRRHFQQQILPLFER-FDVLIAPATPCSAPLIG 385 Query: 418 KE------EN--NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 +E +N SMG + T ++ GLP +VP A +P+G+QLIG PF Sbjct: 386 QETIAINGQNLPTKASMG-----MLTQPISFLGLPVCTVPLATA-SGLPIGVQLIGAPFN 439 Query: 470 EETLFSVGQIIEKEAGYFRP 489 E+ + +E++ F P Sbjct: 440 EQAVLRAAFALEQQGLTFSP 459 >gi|302529919|ref|ZP_07282261.1| amidase [Streptomyces sp. AA4] gi|302438814|gb|EFL10630.1| amidase [Streptomyces sp. AA4] Length = 461 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 147/471 (31%), Positives = 223/471 (47%), Gaps = 44/471 (9%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGI 78 ++S VE + +Q IE+ + ++NA+ V A++A A+ ++ R +G+ L+G+P I Sbjct: 20 ELSPVEATKAALQNIEDRDGEVNAFCLVDAERALDQAKAAEARWRDGNPIGALDGVPASI 79 Query: 79 KDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD F T+G T S + +P +S V ++ + G V+LGK E A +++ Sbjct: 80 KDIFLTQGWPTLRGSTSIPADQPWDVDSPVMARMREAGLVVLGKTTTPEIAWKGVTDSAL 139 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +P + T GGSSGGS+AAVA + S+GTD GGSIR PASF G VG+K Sbjct: 140 TGVTRNP-----VNPRMTAGGSSGGSAAAVAAGMGELSVGTDGGGSIRIPASFCGIVGLK 194 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PT+GR F P L AG + R+V D+A+LL +A D D T + P+ Y A+ Sbjct: 195 PTHGRVPLFPASPFGP-LAHAGPMARSVDDTALLLDVLALPDHRDPTGLAPPISAYREAV 253 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ + P + Q + L DAG + VE + P A+ ++ Sbjct: 254 RRDVRGLIAAYSPTLGFADVDPEVAAIVQSAVQSLADAGLQ-VEQADPGFADPKDAFDVL 312 Query: 318 SPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A A+ +L + V GLR ++E R TY S Sbjct: 313 WSAGAAKSLDAFPPGSEPRVDPGLR-------RVWEKGR---------------TYSASD 350 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYN 431 YL A R + E F DV+LTPT P F G + SG Sbjct: 351 ------YLDATAERAALGILMGE-FHTRYDVLLTPTVPIPPFEAGHDVPPGSGMTEWPEW 403 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT NM PAISVPA E +P+GLQ++G ++ + +V +++E+ Sbjct: 404 TPFTYPFNMTQQPAISVPAGRTEAGLPVGLQIVGPRHSDDLVLAVAKLLEE 454 >gi|156098077|ref|XP_001615071.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Plasmodium vivax SaI-1] gi|148803945|gb|EDL45344.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Plasmodium vivax] Length = 570 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 143/473 (30%), Positives = 215/473 (45%), Gaps = 79/473 (16%) Query: 67 DARDLE------GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +DLE G+PI +KD TK I T S IL+ ++P Y+STV ++L +GAV++G Sbjct: 86 ECKDLEALPKLFGVPIILKDNICTKNIPTTCGSKILEKYKPSYDSTVVRRLKKHGAVIVG 145 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K ++DEFAMGS V +P+ D + GGSSGGS++ + + S+ TDT Sbjct: 146 KTHLDEFAMGSCTGQG----VKNPFNESD----LSCGGSSGGSASCIGSRIIHCSVNTDT 197 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PA+ +G+KPTYGR SR GII + D G+I V D +ILL ++G D+ Sbjct: 198 GGSARTPAALCACIGMKPTYGRISRYGIIPYNEETDVVGLIVNNVYDCSILLDVLSGGDK 257 Query: 241 CDATCVNLPVPDYERALDQ------------SIQGMTVG-----IPKEYRLDYLSPTIDK 283 D T + + R L + ++ M G + K Y +D PT + Sbjct: 258 NDLTTLKGKEKKFHRKLKRYEASPNFQENKWPLKNMKFGYLSEELLKNYFID--DPTF-Q 314 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL-RVEGKD 342 ++ + ++ G +V L YY+ S A+SNL R +GV Y L GK Sbjct: 315 SYLHVMQNIQHMGGTLVSTDLQGLSDYCYLYYLHSMTIANSNLMRINGVNYNLENALGKS 374 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---Q 399 + RS ++V RI IG ++SSR + I KR T+A + Sbjct: 375 --NFVAHVRSTLMSEKVLTRI-IGGAIISSRFQGG---SLQHIFAAAKRRLTKALDGIFA 428 Query: 400 GVDVILTPTTPTSA-------------------FPLGKEENNSGSMGHI----------Y 430 V+ +L P+ P S P K S + H Y Sbjct: 429 QVNFLLLPSLPRSNNLKKSEGTPHGGDPHPKEDAPQEKHSLRSAPIAHPSSEIPPPTEGY 488 Query: 431 ND----VFTVAVNMAGLPAISVPAALCEKKM--PLGLQLIGQPFREETLFSVG 477 N+ +F+V ++ GLP++ +P + PL QL+G+ E L V Sbjct: 489 NNYMKEIFSVVASITGLPSVVIPTGEFTPQFNEPLSFQLLGRSLDEAGLLKVA 541 >gi|225864038|ref|YP_002749416.1| amidase family protein [Bacillus cereus 03BB102] gi|225786356|gb|ACO26573.1| amidase family protein [Bacillus cereus 03BB102] Length = 491 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 150/502 (29%), Positives = 227/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV+LGK Sbjct: 73 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGD--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + PDY + LD + G +G+ PKEY Y + D K +++ Sbjct: 251 LDEKDVATHKSEGIGEPDYTKYLDVNGLNGTKIGVYNNAPKEY---YETGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLHSKGATVVEDIHIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQ 480 >gi|119952379|ref|YP_950124.1| putative amidase [Arthrobacter aurescens TC1] gi|119951509|gb|ABM10419.1| putative Amidase [Arthrobacter aurescens TC1] Length = 470 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 142/471 (30%), Positives = 223/471 (47%), Gaps = 46/471 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++V++ D LR +++ EL + + A ++N ++ + + AR AAE++D + +G Sbjct: 16 VSVTDLADNLRQGKVTSGELTERALNAAREFGPRINCFVTLDEKGARRAAEQADAELSSG 75 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+G+KD +T G+ T S G P+ ++ V L GAV++GK + Sbjct: 76 CDRGPLHGVPVGVKDIISTAGLMTGMGSKHFAGHVPNTDAAVVTSLRSAGAVIIGKTHAH 135 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G + + + GP ++P + + T G SSG ++A AG L A IGTDT GS+R Sbjct: 136 EFAYGPTGDIAVTGPALNP----NDISRVTGGSSSGSAAAVAAGLLPIA-IGTDTAGSVR 190 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY-DECDAT 244 PAS G VG++PT G S G+ + +LD G + +V D+A+L +A+ D T Sbjct: 191 IPASLCGVVGMRPTSGTVSPAGVFPLSRTLDVIGPMAGSVTDTALLWRAMVSRPDHTGVT 250 Query: 245 CVNLPVPDYERALDQSIQG--MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LP+ R + Q + VG K + +S + Q +S L D+GA VE+ Sbjct: 251 GPWLPL----RVPNSPTQSPLLRVGEVKCALTERVSYHQIEALQIAVSALVDSGAVTVEV 306 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGL---RVEGKDILEMYENTRSIGFGQEV 359 +P + I AEA Y L RVE L E R + EV Sbjct: 307 PIPEVDECGRVHQAIQSAEA-----------YALHQDRVESAPDLFDPEILRQLRAASEV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 YVL+ + D LR + + L +D+++ PT P A +G+ Sbjct: 356 SGW----EYVLAMQTRD--RLREQVLAKL----------SSIDLLVMPTVPIEAPLIGQR 399 Query: 420 E---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 E N + TV ++ LPAI+VP + MP G+QL+G+P Sbjct: 400 ELQGENGWTSTREALKSMTVPWSLLDLPAINVPVVVNGAHMPCGVQLVGKP 450 >gi|229590661|ref|YP_002872780.1| amidase [Pseudomonas fluorescens SBW25] gi|229362527|emb|CAY49434.1| putative glutamyl-tRNA amidotransferase subunit A [Pseudomonas fluorescens SBW25] Length = 505 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 118/417 (28%), Positives = 205/417 (49%), Gaps = 24/417 (5%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD + G+ + L+GF P +++TV +L D GA +LGK + + + + T Sbjct: 93 VALKDNISLAGVPMMNGAKPLEGFVPSFDATVVSRLLDAGATILGKATCEHYCLSGGSHT 152 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S PV +P+R F+ GGSS GS+A VA ++G D GGSIR P++F GT G Sbjct: 153 SDPAPVHNPYRH-----GFSSGGSSSGSAALVAAGEVDLAVGGDQGGSIRIPSAFCGTYG 207 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPT+G GI++ ++D AG IT VRD+A++L+ +AG D D V Y Sbjct: 208 MKPTHGLVPYTGIMAIEATIDHAGPITANVRDNALMLEVMAGADGLDPRQAAPQVDTYSD 267 Query: 256 ALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L++ + G+ +G+ +E + L P + + + I GA++ E+S+P + A + Sbjct: 268 YLERGVSGLRIGVLREGFELANQDPRVASSVRNAIDAFARLGAQVEEVSVPEHKIAGALW 327 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-----RSIGFGQEVKHRIMIGTYV 369 + I + + +G G +G L + + ++ +K + +G Y Sbjct: 328 HPIGCEGLTMQMMHGNGA--GFNWQGLYDLGLLDKQAGWRDQANDLSASLKLCMFVGQYG 385 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-----LGKEENNSG 424 L R Y +A+ +R L + + A + D+++ PT P A P E + Sbjct: 386 L-ERYNGRFYAKAQNLRRLARSGYDAALAR-YDLLVMPTVPIIAQPHPEPGCSVTEYVAR 443 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ I N A ++ G PA+S+P L + +P+GL L+G+ + E T++ E Sbjct: 444 ALEMIGN---ASAQDITGHPAMSIPCGLVD-GLPVGLMLVGKHYAEGTIYQAAAAFE 496 >gi|50122420|ref|YP_051587.1| amidase [Pectobacterium atrosepticum SCRI1043] gi|49612946|emb|CAG76397.1| probable amidase [Pectobacterium atrosepticum SCRI1043] Length = 496 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 144/501 (28%), Positives = 237/501 (47%), Gaps = 55/501 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E + +++ + + L++ SA EL + AIE +N +NAY V +++ A AE D Sbjct: 8 ESSSLSIRQIQQGLQAGTFSAKELAQQALAAIEQTNPTINAYTHVTSKRMLAEAERIDAC 67 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLG 120 G+ L G+P +K+ F G T A + + P + T++L GA++ G Sbjct: 68 RQRGETLPALAGVPYAVKNLFDVSGETTLAGAELFSQKPPATQDAFATRQLASQGALLSG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 LNMD +A G + E S+YGP +P +D+ + GGSSGGS+AAVA L ++G+DT Sbjct: 128 MLNMDAYAYGFTTENSHYGPTRNP---LDT--QRIAGGSSGGSAAAVAAGLVNFTLGSDT 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P+S G G+KPT+GR SR G F SLD G + R+ D A++ A+ G D+ Sbjct: 183 NGSIRVPSSLCGIFGLKPTFGRLSRHGSHPFVASLDHIGPLARSADDLALVFDALQGRDK 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKI 299 D + L+ G+ + LD Y S + + + + A Sbjct: 243 HDRFQAERETQHTAQQLEAGSDGLRYAV-----LDGYFSTWSSEEAKTAVYQIAQALGAQ 297 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQ 357 ++L A A +I+S +E G +Y LR T+S F Sbjct: 298 DCLTLTDAALARSAAFILSASEG--------GNQYLPDLR------------TQSERFEP 337 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + R++ G + + Y++A++ R ++ FE D+++ P TP SA +G Sbjct: 338 LSRERLLAGAMIPA-----VWYVQAQRFRNYFRQQTLALFEH-TDLLIAPATPCSATLIG 391 Query: 418 KEE---NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 +E N++ SMG + T ++ GLP ++VP A +P+G+Q+I P+R Sbjct: 392 QETMRINDTDLPVRASMG-----MLTQPISFVGLPVVTVPVATA-SGLPIGIQIIAAPWR 445 Query: 470 EETLFSVGQIIEKEAGYFRPH 490 E+ +E++ + H Sbjct: 446 EDLCLRTAWALEQQGITYTRH 466 >gi|310820358|ref|YP_003952716.1| amidase family protein [Stigmatella aurantiaca DW4/3-1] gi|309393430|gb|ADO70889.1| Amidase family protein [Stigmatella aurantiaca DW4/3-1] Length = 558 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 136/473 (28%), Positives = 217/473 (45%), Gaps = 45/473 (9%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 ++ V+ + I+ ++ ++ +I ++ +AAE S +R+ G L+G+P+ +K Sbjct: 109 VAVVKRAHAAIERLDGGADRLGLFIARKPEEVLSAAEASSERLRAGMPLSVLDGVPVVLK 168 Query: 80 DCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D G T ++ + R +STV +L GA++LGK NM+E + +Y Sbjct: 169 DEVDLAGFPTTLGTTYRTEVAR--ADSTVAARLKAAGALILGKANMNEIGINPIGLNPHY 226 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW T SS SSAAVA LC SIG D GGSIR PA+ G VG+K Sbjct: 227 GAARNPWNRGHITGG-----SSSASSAAVAAGLCPLSIGADGGGSIRIPAALCGIVGLKA 281 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T+GR G+ ++ G + TV D A + +AG D D + PV R D Sbjct: 282 TWGRIPETGVPPLCWNVAHVGPMGLTVDDVAAMYAILAGPDGHDVVARDQPVHHLSRYED 341 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 S+QG+ +G+ Y D P + + + L DAGA +VE+ P L + I Sbjct: 342 GSLQGIRLGVCTPYFEDA-DPDVVTRCKDALRALTDAGATVVELPPPDLNAILWTHSCII 400 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 +E + + +L + S+ FG + + + +G ++ + Sbjct: 401 LSEMA-----------------EAVLPQLKARASV-FGLDSRANLALGRQFRATDFVHAL 442 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PTSAFPLGKEENNSGSMGHIYN 431 R R R L+ A VDV++TPTT P S P G E+N + + Sbjct: 443 RHRHRLTRELL------ALMADVDVLVTPTTACTAPAIPESTLPAG--ESNLPVVDALMR 494 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 F N+ G PA+SVPA +P+G+ L G+P+ E L +G+++E+ A Sbjct: 495 --FVRLANLTGNPALSVPAGFDRAGLPVGVHLTGRPYEEHLLLRLGRVVERAA 545 >gi|237508407|ref|ZP_04521122.1| indole acetimide hydrolase [Burkholderia pseudomallei MSHR346] gi|235000612|gb|EEP50036.1| indole acetimide hydrolase [Burkholderia pseudomallei MSHR346] Length = 553 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 133/451 (29%), Positives = 215/451 (47%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L GF Sbjct: 131 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFD 190 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 191 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNP-----HDPARIAGGSS 245 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 246 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 304 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G DA P P ++ G+ VG+P D L P Sbjct: 305 IAHGIDDLLLLDAVLTG----DA---GEPAP-------VALAGLRVGVPDAPYFDGLDPA 350 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 351 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 401 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 402 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 457 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 458 RTGVDCIALPTVQCDA-PLVIDSGHDLPSDAAYALFTRVIRQTGPATLGGMPSVSIPAGL 516 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 517 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 547 >gi|327392850|dbj|BAK10272.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Pantoea ananatis AJ13355] Length = 465 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 135/501 (26%), Positives = 230/501 (45%), Gaps = 56/501 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +SE++ A+ + +++ +ISA E+ + + AIE N Q+NA+ ++ + + A+ D Sbjct: 3 LSEVSIQALQQ---KIQQGEISAREVAEQTLTAIEKQNPQLNAWTDITSTRMLQEADAID 59 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAV 117 K+ + G+ L GIP +K+ F +G T A + + RP + ++ +L GA+ Sbjct: 60 KQRLRGEMLPPLAGIPYAVKNLFDVQGYSTLAGAELFRQ-RPAANRDAFAITQLQQAGAL 118 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + G +NMD +A G + E S+YG +P + + GGS+ +A + F S+G Sbjct: 119 LSGMVNMDAYAYGFTTENSHYGATRNP-HDLARIAGGSSGGSAAAVAAGLVPF----SLG 173 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDT GSIR PAS G G+KPT+GR SR G F SLD G R V D A + + G Sbjct: 174 TDTNGSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLLQG 233 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D DA + P L++ Q + + + S D + + A Sbjct: 234 KDSMDAFQADRPQAPTRPQLERGAQDLRCAVLG----GFFSTWCDHDARNAQIQIATALQ 289 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 E+ + + A A +I++ +E ++ LR + + F Sbjct: 290 ASEEVIMAEAELARSAAFIMTASEGGNHYLP------ALRQQPER------------FEP 331 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL- 416 + R++ G + + Y++A++ R ++ F++ DV++ P TP SA PL Sbjct: 332 HSRERLLAGAMLPG-----AWYVQAQRFRRHFQQQILPLFDR-FDVLIAPATPCSA-PLI 384 Query: 417 --------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 G+ SMG + T ++ GLP +VP A +P+G+QLIG PF Sbjct: 385 DQETIAINGQNLPTKASMG-----MLTQPISFLGLPVCTVPLATA-SGLPIGVQLIGAPF 438 Query: 469 REETLFSVGQIIEKEAGYFRP 489 E+ + +E++ F P Sbjct: 439 NEQAVLRAAFALEQQGLTFSP 459 >gi|224093658|ref|XP_002309950.1| predicted protein [Populus trichocarpa] gi|222852853|gb|EEE90400.1| predicted protein [Populus trichocarpa] Length = 578 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 136/475 (28%), Positives = 223/475 (46%), Gaps = 40/475 (8%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +I+ ++ + + AI S+S M +I A+ A+ES R G+ R L+G Sbjct: 113 SGEITPYKVAERLVAAIHESSSPPLDMAFFINYDAEDILRQAKESTLRYQRGEPRSVLDG 172 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ IKD T + L FRP ++ +L G V++GK NM E G+S Sbjct: 173 VPVAIKDEIDCSPYPTTGGTKWLHKFRPCKSDAFCILRLRSCGVVIIGKTNMHELGAGTS 232 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +P+ + SS GS+A VA LC ++G D GGS+R PA+ G Sbjct: 233 GINPHYGATRNPYDPSRISGG-----SSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCG 287 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPT+GR G++ ++ G++ T+ D+ I+ AI G T V P Sbjct: 288 VVGFKPTFGRVPHSGVLPLNWTVGMVGVLAGTIEDALIVYAAINGPVPSHETSVIPPPKM 347 Query: 253 YERALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQY 309 Y L S+ +T+ E+ D S I + L + G K V++++P + Sbjct: 348 YFPMLQSTNSVSDITLARYGEWFND-CSDDIRTCCSLALHKLSEKHGWKTVDVTIPDIEA 406 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A+Y+ +E ++ L+ Y +E DI E G +V R+ + Y Sbjct: 407 MRLAHYLTIGSECTAALSSY--------LEKLDIAES---------GWDV--RVALSVYG 447 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 S Y++A+K+R + F DVI+TPT +A+P+ + ++G + +I Sbjct: 448 AFS---GEDYIKAQKLRNR-QIQFHRNIFTKADVIVTPTVGVTAYPILNDALHTGELDYI 503 Query: 430 YNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +A N GLPA++VP +K +P+GLQ IG+P+ E TL + ++ Sbjct: 504 NGAALVRYQIAGNFLGLPAVTVPVGYDKKGLPIGLQFIGRPWSEPTLIHIAHAMQ 558 >gi|317486387|ref|ZP_07945215.1| amidase [Bilophila wadsworthia 3_1_6] gi|316922376|gb|EFV43634.1| amidase [Bilophila wadsworthia 3_1_6] Length = 459 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 137/486 (28%), Positives = 215/486 (44%), Gaps = 47/486 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++++ LR+ ++++ LV ++A+ + +NA + V A A AE D G Sbjct: 8 ITITQAAAALRAGELTSAALVRHALEAVRLHDGTLNAMLRVSA-SALEEAERCDAEAAQG 66 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L GIP+ IKD +G+ T S + ++ +L GAV+ GK N+ Sbjct: 67 SFRGPLHGIPLVIKDNIDVRGLPTTVASPLFTHAAPAKADAVAVARLRAAGAVIFGKTNL 126 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DE A S TS +GP ++PW + +PGGSS G++AAVA C +GTDTGGSI Sbjct: 127 DELAAHVSGRTSCFGPTVNPWHP---ERRLSPGGSSSGTAAAVAAGYCPGGLGTDTGGSI 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA + G GI+ T G+ GI A SLD G + R+ RD +LL+ +A Sbjct: 184 RLPAGWCGLYGIRSTQGQSDISGIYPRAASLDTVGAMARSARDIDLLLQILA-------- 235 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + P+ D RA I+ + +G+ E SP + + + + + ++ G + + + L Sbjct: 236 --DPPLRDTLRA-SAPIRYLRIGVFPELVRAKGSPEVIEAYAEAVGRWEEFG-ECIPVGL 291 Query: 305 PHTQYALPAYYIISPAEASS--NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + PA S + Y+ R DI + E G H Sbjct: 292 P---------LLDDPAVVDSVGTIRSYEFAR--------DIRKDIEGNPFAG----KMHP 330 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEEN 421 + + Y + Y A + + R F VD +L P ++A P Sbjct: 331 VPLADYKNGQQATPEAYHAALLHKQALSRQVDAFFASLQVDFLLLPVAFSTA-PSIDAPQ 389 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + G ++F+V AG+P + VP L MPLG+QL+G E L G E Sbjct: 390 EAFTAGRALVNLFSV----AGVPTLVVPGELTAGGMPLGIQLVGPALSERLLLDAGTAYE 445 Query: 482 KEAGYF 487 G F Sbjct: 446 TTYGPF 451 >gi|20804027|emb|CAD31604.1| PUTATIVE AMIDASE PROTEIN [Mesorhizobium loti R7A] Length = 445 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 140/471 (29%), Positives = 219/471 (46%), Gaps = 50/471 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L + SAVE+V I A E +NS + ++I V A A A +SD R G L+GI Sbjct: 14 LEGGNRSAVEIVRECIAAAERTNSSLRSFITVAADHALKQAGKSDARRRAGRVLGPLDGI 73 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P KD F T+GI T S +L+ P + L GA ++GK N+ EFA G++ E Sbjct: 74 PYAAKDMFETRGIRTTGGSRVLENNVPDTSAAAICMLDAAGAALIGKTNLHEFAYGATGE 133 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G V++P D T GSS GS+AAVA + ++GTDTGGS+R PA+ G Sbjct: 134 NRWAGTVVNPH---DETRLAG--GSSSGSAAAVAAGIVPFALGTDTGGSVRVPAALCGIA 188 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KP+YG S G+I + SLD AG++ +V D ++++ IA LP Sbjct: 189 GYKPSYGLISLDGVIPYCWSLDHAGVLATSVEDLELVVRHIA----------KLP----- 233 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 Q + V + + + P D + ++ GA I LP A Sbjct: 234 -PATQPSAALRVALVEGFEEKCEEPVQD-AFLATKGHMRRLGAMFGAIELPDQSVARTVS 291 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I AE + Y G R +D FG +++ +++G ++ + Sbjct: 292 LTIQLAETLT----YHGPN---RARARD-----------RFGADMRGGMVLGQFLSA--- 330 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYN-- 431 Y++ +++ +R F +A Q DV+LTP P A +G + + +G + N Sbjct: 331 --ESYIQCKRMLGTYRRAFAQAM-QMFDVLLTPACPIMAPQVGTVDVDIAGQTIPLGNAL 387 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +FT N+ G PA+ +P A +P+ +Q++G P + LF + I+E Sbjct: 388 TLFTSFFNLVGAPALVLPVASPSGGLPVAVQIVGSPGSDSQLFGIALILEN 438 >gi|289583559|ref|YP_003481969.1| Amidase [Natrialba magadii ATCC 43099] gi|289533057|gb|ADD07407.1| Amidase [Natrialba magadii ATCC 43099] Length = 480 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 135/499 (27%), Positives = 224/499 (44%), Gaps = 49/499 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 EL M+ + R+R D+S +VD+++ I + N + NA++ + + AR A E+++ Sbjct: 3 DELTHMSAAGIARRIRDGDVSPTAVVDAHLDRIADRNERTNAFVTITEELAREQAREAER 62 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I NG++ L G+P+ IKD +GI T S + + + +L + GA+++G Sbjct: 63 AIENGESLGPLHGVPVAIKDLDNVEGIRTTFGSKLYEDNVAEEDDLFVSRLKEAGAIIVG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASI 176 K N EF +G + + GP +P F PG GSSGG+ AA+ L + Sbjct: 123 KTNTPEFGLGVATDNLVAGPTGTP---------FDPGKISGGSSGGAGAALGDSLVPIAQ 173 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYG---RCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 G+DTGGSIR PA+ G G KPT+G R S G ++RTV D+A++L Sbjct: 174 GSDTGGSIRVPAACCGVFGHKPTFGLVPEPGRPNAFSNHTPCSHLGPMSRTVEDAALMLD 233 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +AG D D + Y A D+ I +T+ + +S T+ + + Sbjct: 234 VMAGPDGRDPFSLPDDGTTYADAPDRPIDDLTIAYSPDLGTYPVSETVTSVLDDAVGAFE 293 Query: 294 DAGAKI--VEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 D GA + V+ L HT+ + AYY + V +G+ + EN Sbjct: 294 DTGATVERVDPDLGHTKEEIVDAYYTFA------------NVLWGM---------LLENL 332 Query: 351 RSIGFGQEVKHRIMIGTYVL-----SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 + GF R + Y++ S Y A +RT + + FE+ D+++ Sbjct: 333 QDDGFDPYDADREKLRPYLVDLILESDEPTMKAYRDANVVRTAVLDGLCDLFEE-YDLLV 391 Query: 406 TPTTPTSAFPLGK-EENNSGSMGHIYND-VFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 + T F G E G+ Y + T N+ G PA + PA L + +P+G+Q+ Sbjct: 392 SATMAVPPFDHGAYPEAVDGTDVEQYRGWILTQPYNLTGQPAATAPAGLTDDGLPIGMQI 451 Query: 464 IGQPFREETLFSVGQIIEK 482 R+E + + +E+ Sbjct: 452 AAPRHRDEDVLAAAGALER 470 >gi|297157656|gb|ADI07368.1| indoleacetamide hydrolase [Streptomyces bingchenggensis BCW-1] Length = 477 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 143/494 (28%), Positives = 222/494 (44%), Gaps = 46/494 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+ + +R DISAVELVDS++ I N Q+NA +++AQ+AR AA ++D+R G Sbjct: 8 MSAAAQAQAVRDGDISAVELVDSHLDRIAEVNPQVNAVTQLLAQRAREAAAQTDRRRAAG 67 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P +K+ A +G+ T S ++ +L GA+ +G NM Sbjct: 68 ERLGPLAGVPFTVKETTAVEGVPTTLGSARFRDLVAPADAPPVARLRAAGAIPIGHSNMP 127 Query: 126 EFAM-GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + G + +G ++PW TPGGSSGG AVA + A +G D+GGS+ Sbjct: 128 TLVLAGMHTRSELFGDTVNPWDP-----ARTPGGSSGGDGVAVATGMAALGLGNDSGGSV 182 Query: 185 RQPASFTGTVGIKPTYGRCSR----LGIISFAPS---LDQAGIITRTVRDSAILLKAIAG 237 R PASF G G+KPT GR LG P+ L G + R V D + +A+AG Sbjct: 183 RIPASFCGVAGLKPTTGRFPADHRVLGQDDPGPASQLLVTDGPLARGVADLRLAYEALAG 242 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D V PVP Y L ++ V P + + PT+ L+DAG Sbjct: 243 TDPRDPRAV--PVPAYGERLPGPLKVAVVADPGGH---GVHPTVRGAVATAADALRDAGY 297 Query: 298 KIVEIS-LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + E++ +P AL AY+ I+ E + + VR L EG D R IG Sbjct: 298 DVREVADVPRLDEALEAYHRITVTEFAPT---WPAVRK-LLGEGGD--------RYIGMT 345 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 E + +++ I+R + E ++ ++L P Sbjct: 346 ME-----------QTPPATAEEFMKLMGAWFSIRRSWAEFLDE-YPLLLGPVFTEPPVEP 393 Query: 417 GKEENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G E + + + +V + G+P ++VP L + +P G+Q++G+ FRE+ + Sbjct: 394 GLESRDRAGRQRVGAGMRLCSVTSFVGVPGVAVPTGLSD-GLPSGVQIVGRAFREDLCLA 452 Query: 476 VGQIIEKEAGYFRP 489 Q IE G P Sbjct: 453 AAQEIEDRLGVLTP 466 >gi|254184470|ref|ZP_04891059.1| amidase family protein [Burkholderia pseudomallei 1655] gi|184215062|gb|EDU12043.1| amidase family protein [Burkholderia pseudomallei 1655] Length = 467 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 135/478 (28%), Positives = 227/478 (47%), Gaps = 44/478 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + + + A+E ++ ++ + + A V + AR AA D +I +G L G Sbjct: 19 DAVNGRRVRALEQAEAALERLALVEP-LAAMTHVAPEIARRAAANVDAQIASGRRLPLAG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T+A S L GF +T Q+L + GAV LGK NM E A G ++ Sbjct: 78 VPFVIKDNLFTADMPTRAASPALLGFGATRNATAVQQLLNAGAVPLGKANMHELAFGITS 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y+G V +P GGSSGG++ AVA + A +GTDTGGS+R PA+F G Sbjct: 138 ANGYFGAVRNPHDPARIA-----GGSSGGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGV 191 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++PT R S G+++ +P+ D G I + D +L + G DA P P Sbjct: 192 AGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTG----DA---GEPAP-- 242 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ G+ VG+P D L P + + ++ ++ L DAGA+++ ++ A Sbjct: 243 -----VALAGLRVGVPDAPYFDGLDPAVAELTERALAALTDAGARLIPLA---------A 288 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + EA +A ++ + Y R + + L E +G +V+H + ++ Sbjct: 289 HALHEADEACGFPIAGFEALAYWRRFSAERLDLPFAEFVARLG-SDDVRHLFRM---LID 344 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN---SGSMG 427 + Y A + R + +AF + GVD I PT A PL + + S + Sbjct: 345 APPSSDAYAAAIDVLQSTVRWYDQAFHRTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAY 403 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 ++ V T + G+P++S+PA L + +P+GL L G + L ++ + +E+ Sbjct: 404 ALFTRVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 461 >gi|327309786|ref|YP_004336684.1| Amidase [Pseudonocardia dioxanivorans CB1190] gi|326955121|gb|AEA28817.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 535 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 146/471 (30%), Positives = 219/471 (46%), Gaps = 45/471 (9%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 + S E+V ++ I N +NA+ + A AA +S +R G R LEGIP+G+K Sbjct: 21 EFSPREIVSRTLERIAAVNPVINAHWHTTSDAAIDAATQSTERWRAGAPRPLEGIPVGVK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D G S I G R ++TV +L GA+++ K EF +G S+ G Sbjct: 81 DVIDVAGHPCTGGSSIYLGRRAQTDATVVARLRAAGAIVVTKDATTEFGIGGPLNPSF-G 139 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 P +PW T GGSS G++A +A ++GTD GGS+R PA+++G VG+KPT Sbjct: 140 PTRNPWNLQHWT-----GGSSCGAAAGLAAGTIPLAVGTDAGGSVRMPAAWSGVVGLKPT 194 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE---RA 256 GR SR G++ + + G + RTV D++ LL IAG+D D V DYE A Sbjct: 195 MGRVSRRGVMPCSWHAEVVGPMARTVSDASRLLNIIAGFDPHDPRTVPA---DYEPTHSA 251 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS-LPHTQYALPAYY 315 +D ++ + +GI E+ + + +DAGA+I+ ++ LP + Y Sbjct: 252 VD--VRSLRIGIAPEWWESLVDSATARAVADATDIFRDAGAQIIPLTGLPPARELHDLSY 309 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 I AEAS + E + N V+ R+ G V ++ + Sbjct: 310 EIVFAEASW------------------VHESHANHHDSMDPVTVR-RLGTGRGVAAAAYF 350 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE----NNSGSMGHIYN 431 + RA R T A VDV+LTPTT T+A L + E N + + H Y Sbjct: 351 ELLQRRADAQRR------TYAALDPVDVLLTPTTVTTAPRLDQLELTIDNETVPLHHGYA 404 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T N+ G PA++VPA L MPL +Q +P+ E G E+ Sbjct: 405 -LLTAHANLTGFPALAVPAGLTTAGMPLSIQFTARPWNENACCRAGHAFER 454 >gi|27376152|ref|NP_767681.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27349291|dbj|BAC46306.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA 110] Length = 458 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 145/455 (31%), Positives = 218/455 (47%), Gaps = 42/455 (9%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQAC 92 I+ ++ +N++ +V A++A A A D I G + L G+P +K+ F G+ T+A Sbjct: 28 IKQHDTILNSFTDVTAERALAKARAIDADIAAGKEVGPLAGVPFAVKNLFDVAGLPTRAG 87 Query: 93 SHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S I P ++T+ ++L GAV++G LNM E+A + E + GP +P D+T Sbjct: 88 SKINRDLAPAKRDATLIERLEAAGAVLVGALNMGEYAYDFTGENIHDGPSRNPH---DTT 144 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 GSSGGS +AV G L ++G+DT GSIR P+SF G G+KPTYGR SR F Sbjct: 145 RMSG--GSSGGSGSAVGGALVPIALGSDTNGSIRVPSSFCGIFGLKPTYGRLSRARSFPF 202 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 S D G RTV D A+ A+ G D DA C + L + + + I Sbjct: 203 VASFDHLGPFARTVTDLALAYDAMQGPDAGDAACTTRGLEPTVPLLANPVSDLRIAIAGG 262 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE-ASSNLARYD 330 Y + P + + L +IVE+ P A A Y+IS E AS +L R Sbjct: 263 YFQKNVFPEAVEAVSRVAKAL--GATQIVEV--PEAARARAAAYVISTTEGASLHLDR-- 316 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 LR D F V+ R++ G V + RA+K R + Sbjct: 317 -----LRKRPND------------FDPAVRDRLIAGAMVPAPLVD-----RAQKFRRWYR 354 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYND--VFTVAVNMAGLPAIS 447 F+E F+ VDV+L P TP +A LG+ N G + + + T ++ GLP ++ Sbjct: 355 AQFSEIFKS-VDVLLAPATPCTAPKLGQVNFNLDGVELPVRANIGIHTQPISFIGLPVVA 413 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 VP L + +P+G+Q+I P+RE+ V +E+ Sbjct: 414 VPVPL--EPLPIGVQIIAAPWREDIALRVAHTLER 446 >gi|312960243|ref|ZP_07774754.1| Amidase [Pseudomonas fluorescens WH6] gi|311285465|gb|EFQ64035.1| Amidase [Pseudomonas fluorescens WH6] Length = 504 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/416 (28%), Positives = 208/416 (50%), Gaps = 26/416 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD + G+ + L+GF P +++TV +L D GA +LGK + + + Sbjct: 88 LAGKTVALKDNISLAGVPMMNGAKPLEGFVPAFDATVVTRLLDAGATILGKATCEHYCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS PV +P R F GGSS GS+A VA ++G D GGSIR P++F Sbjct: 148 GGSHTSDPAPVHNPHRH-----GFASGGSSSGSAALVAAGEVDLAVGADQGGSIRIPSAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 GT G+KPT+G GI++ ++D AG IT TVRD+A++L+ +AG D D V Sbjct: 203 CGTYGMKPTHGLVPYTGIMAIEATIDHAGPITATVRDNALMLEVMAGTDGLDPRQAAPQV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y LD+ ++G+ +G+ +E + L P + + + I+ + GA++ E+S+ Sbjct: 263 DTYSAYLDRGVKGLRIGVLREGFELANQDPRVAASVRNAIAQFERLGAQVEEVSVAEHAI 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE-------VKHR 362 A ++ I + + +G + K + ++ + G+ ++ +K Sbjct: 323 AGALWHPIGCEGLTMQMMHGNGAGFNW----KGLYDLALLDKQAGWREQADDLSASLKLC 378 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + +G Y + R +Y +A+ +R L + + A + D+++ PT P A P E Sbjct: 379 MFVGQYGV-ERYNGRYYAKAQNLRRLARAGYDAALAR-YDLLVMPTVPIIAQP--HPEPG 434 Query: 423 SGSMGHIYNDVFTV----AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + + A ++ G PA+S+P L E +P+GL L+G+ + E T++ Sbjct: 435 CSITDYVARALEMIGNASAQDITGHPAMSIPCGLVE-GLPVGLMLVGKHYAEGTIY 489 >gi|331694219|ref|YP_004330458.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326948908|gb|AEA22605.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 442 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 133/475 (28%), Positives = 220/475 (46%), Gaps = 53/475 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 LRS ++S E V + + + NA + + ++A A A + + G+ R L G+ Sbjct: 12 LRSGELSPTEHVRDVLDRLRGDTT--NAVVTLDEERALADAAARTEELGRGEWRGPLHGV 69 Query: 75 PIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +G+KD +G+ T+ S +L D ++ V +L + GAV++GKL+ EFA G + Sbjct: 70 AVGVKDIIDVEGLPTRCGSAVLADAAPAEADNPVVARLREAGAVVVGKLHTHEFAYGPTG 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + S GP +P D T + T G SSG ++A AG L A ++GTDTG S+R PA+ G Sbjct: 130 DVSVSGPARNP---HDPT-RITGGSSSGSAAAVAAGHL-ALTLGTDTGASVRVPAALCGV 184 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPT GR S + + + D G++T V ++++ +A D T + P Sbjct: 185 VGLKPTRGRLSTERVFPLSDTCDHVGVLTADVHGASVVWDVLA---RPDGTGGGIQQP-- 239 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + G+ +G+P + P I +T + ++ L+ AGA+I EI +P P Sbjct: 240 ------GVSGVRIGVPTGPYWEAADPVIVETTRDAVARLEKAGAQITEIEIPAIDELAPL 293 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+ I AEA + +D+L R + R+ + ++ Sbjct: 294 YFTIVNAEAYAT--------------HRDLLA----ARRADYQPATLERLEPNANLTATE 335 Query: 374 CYDSHYLRAR---KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 D+ R R +IRT G+D ++ PTT A P+G E G Sbjct: 336 YIDAQRARVRLTAEIRTAC---------DGIDALVLPTTRVRATPIGAESVEVGGRDVTV 386 Query: 431 ND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T+ N+ G PA+SVP + + ++P+G+Q+ G E + V IE+ Sbjct: 387 RPALLALTLPFNLTGWPAVSVPGRVDQGELPVGVQIAGVRLEERGVLRVAAAIER 441 >gi|170747087|ref|YP_001753347.1| amidase [Methylobacterium radiotolerans JCM 2831] gi|170653609|gb|ACB22664.1| amidohydrolase, AtzE family [Methylobacterium radiotolerans JCM 2831] Length = 466 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 143/476 (30%), Positives = 216/476 (45%), Gaps = 59/476 (12%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKD 80 +A ++V + + I + ++ A+ +V++ +A A A+ D + NG L G+P +K+ Sbjct: 22 TARQVVAAALDRIGRLDGRVGAFTDVLSARALARADAQDAALRNGSPPGPLAGVPFAVKN 81 Query: 81 CFATKGIHTQACSHILDGFRPHYE--STVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 G+ T+A S I + RP E + ++L GA+++G LNM E+A + E + Sbjct: 82 LIDIDGLPTRAGSKI-NRERPPAERDGALVRRLEAAGAILVGALNMGEYAYDFTGENIHD 140 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P + D T GGSS GS AA+A + ++G+DT GSIR PA+F G G+KP Sbjct: 141 GDAHNPH----ALDHMT-GGSSSGSGAALAAGMVPLTLGSDTNGSIRVPAAFCGCFGLKP 195 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGR SR G F SLD G + R+V D A+ A+ G D D P LD Sbjct: 196 TYGRLSRAGSFPFVGSLDHLGPMARSVTDLALAYDAMQGPDPDDPVATLRPAEPVLPGLD 255 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + G+ V + Y P + L GA+ + LP A A Y+I+ Sbjct: 256 AGLDGLRVAVAGGYFARGGDPEAFAAVARAAEAL---GARRT-VELPEAHRARAAAYLIT 311 Query: 319 PAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AE A+ +L R TR F V+ R++ G + + Sbjct: 312 AAEGATLHLDRL-------------------RTRPQDFDPAVRDRLIAGAMIPA-----P 347 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND----- 432 H RA++ R + FE VDVIL P TP A G H D Sbjct: 348 HVERAQRFRRWYRARVLALFET-VDVILAPATPCRA--------PRGGQTHFVLDGVTLP 398 Query: 433 ------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 VFT ++ GLP ++ P L + +PLG+Q+I P+RE+ V +E+ Sbjct: 399 VRANIGVFTQPISFIGLPVVAAPIRL-DAGLPLGVQVIAAPWREDLALRVAHHLER 453 >gi|254254228|ref|ZP_04947545.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia dolosa AUO158] gi|124898873|gb|EAY70716.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia dolosa AUO158] Length = 494 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 140/503 (27%), Positives = 222/503 (44%), Gaps = 50/503 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR----AAAEESDKR 62 ++ E +R+K +S VE + +Y+ IE N +NA +VA + R A A E D Sbjct: 23 LSAGELASAIRTKAVSCVETMHAYLDHIECVNGAVNA---IVALRERDTLLAEAAEKDAA 79 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + GD L GIP KD TKG+ T S I P +S ++ GA+ +GK Sbjct: 80 LARGDYHGWLHGIPQAPKDLAMTKGLVTTFGSPIFRDNVPLADSVGVARMRAAGAIFIGK 139 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG +P+ S GGSSGG++AA+A + + G+D G Sbjct: 140 TNTPEFGLGSHTFNEVYGATRNPYDLTKSA-----GGSSGGTAAALAARMLPVADGSDFG 194 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA+F G +P+ GR R + F L G + RTV D A LL AGYD Sbjct: 195 GSLRNPAAFCNVYGFRPSQGRVPRWPAVDVFIQQLGIEGPMGRTVGDVAQLLAIQAGYDR 254 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAK 298 D + + + LD+ ++G + ++ YL+ P + +QG++ L++ G Sbjct: 255 NDPLSLADDPAVFTQPLDKDLRGTRIAWVGDWN-GYLATEPGVLALCEQGLATLREIGCD 313 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQ 357 + ALPA+ P E L + +R+ L G +L Y + R Sbjct: 314 V--------DAALPAF----PPERIWQL--WLALRHLL--SGGGLLAHYRDPARRALLKP 357 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E + + + + +D+ R + +++ F D I PT FP Sbjct: 358 EAIYEVEGLLAMHGAEVFDATAQRTAWHQAVLR------FFDRYDFIAAPT--AQVFPFD 409 Query: 418 KEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E+ + D + V +AG P ISVP + +P+G+QLIG+P + Sbjct: 410 VEQRWPSEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNDAGLPMGMQLIGRPRADL 469 Query: 472 TLFSVGQIIEKEAGYF--RPHKW 492 + + + E+ A + R +W Sbjct: 470 AVLQLARGYERAADWVGTRVPRW 492 >gi|325276341|ref|ZP_08142120.1| amidase [Pseudomonas sp. TJI-51] gi|324098533|gb|EGB96600.1| amidase [Pseudomonas sp. TJI-51] Length = 504 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 118/421 (28%), Positives = 209/421 (49%), Gaps = 20/421 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD + G+ + L GF P +++TV +L D G +LGK + + + Sbjct: 88 LLGRTVALKDNISLAGVPMMNGASPLAGFVPSFDATVVTRLLDAGVTILGKATCEHYCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS PV +P R ST SS GS+A VA ++G D GGS+R PA++ Sbjct: 148 GASHTSDPAPVHNPLRPGFSTGG-----SSSGSAALVAAGEVDLAVGGDQGGSVRIPAAW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G G+++ + D G +TR+VRD+A++L+ +AG D D V Sbjct: 203 CGIYGMKPTFGLVPYTGVMAIEATFDHVGPMTRSVRDNALMLEVMAGTDGLDPRQGAPEV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y L + + G+ +GI +E ++L L P + +T + I+ L+ GA + E+S+P Sbjct: 263 DSYSDYLGRGVGGLRIGILQEGFQLANLDPRVAETVRGAIARLEALGAVVEEVSVPEHTL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRY---GLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 A + I + + +G + GL G + T++ +K +++G Sbjct: 323 AGTLWNPIGCEGLTMQMMHGNGAGFNWKGLYDVGLLDKQAGWRTQADALSPSLKLCMLVG 382 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-----EEN 421 + L + +Y +A+ + + + +A ++ D+++ PT P A PL EN Sbjct: 383 QFGL-EHYHGRYYAKAQNLARFARAGYDKALQR-YDLLVMPTVPIVAQPLPAPDCSITEN 440 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S ++ + N T A ++ G PA+S+P L + +P+GL L+G+ + E T++ E Sbjct: 441 VSRALEMLGN---TAAQDITGHPAMSIPCGLVD-GLPVGLMLVGKHYAEGTIYRAAAAFE 496 Query: 482 K 482 Sbjct: 497 N 497 >gi|188583000|ref|YP_001926445.1| amidase [Methylobacterium populi BJ001] gi|179346498|gb|ACB81910.1| Amidase [Methylobacterium populi BJ001] Length = 469 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 142/506 (28%), Positives = 224/506 (44%), Gaps = 61/506 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +FM E R + ++ IS VEL + + E S + +NA+ +V ++AR+AA +++ Sbjct: 3 SDFDFMTALELRRLIAARAISPVELTERALARAEASQASLNAFCHLVPEEARSAARRAEE 62 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+P+ +KD A G + S + ++ ++L GA+++G Sbjct: 63 AVMRGAPLGLLHGLPVSVKDLIAVGGQPYASGSRAMASNIAAADAPAVERLRAAGAIIIG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ G PW TPGGSS G++A+VA + ++GTD Sbjct: 123 KTTTSEFGAKPVGDSPLTGITRHPWDLAK-----TPGGSSAGAAASVAAGITPCALGTDG 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ TG VG K +GR + S P+L G + R V D+A+L A+AG+D Sbjct: 178 GGSLRIPAALTGLVGFKAQFGRVP-VWPTSATPTLAHVGALARNVADAALLTTAVAGHDP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVPD A+ SI G+ V +P + L D GA + Sbjct: 237 RDPFAVAGPVPDLLVAVKASIAGLRVAWSATLGYARPNPEVAAIAHAAAMALADQGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-----KDILE-MYENTRSIG 354 E+ + S A Y G+ G R+ G +D+L+ + Sbjct: 297 EVE----------TVLESDPAALWTAEFYAGI--GTRLRGVLESRRDLLDPAVADLLDAA 344 Query: 355 FGQEVK--HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 QE++ + + Y L R + F G DV+++PT P S Sbjct: 345 LAQEMRAYYETVFARYALRDRMVN--------------------FFTGYDVLVSPTLPIS 384 Query: 413 AF------PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + P G E+ + S +T N+ G PA+SV A + MP+GLQ++G+ Sbjct: 385 SLEAGRNIPEGLEDRSLVSWAF-----YTYPFNLTGQPAVSVCAGIASDGMPVGLQIVGR 439 Query: 467 PFREETLFSVGQIIE--KEAGY-FRP 489 E + IE K GY RP Sbjct: 440 TLGEYDVMRAAAAIERTKPPGYNLRP 465 >gi|229091073|ref|ZP_04222296.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock3-42] gi|228692204|gb|EEL45940.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock3-42] Length = 493 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 148/502 (29%), Positives = 229/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + PDY + LD + G +G+ PKEY Y + D K +++ Sbjct: 253 VDEKDVATHKSEGIGEPDYTKYLDVNGLNGTKIGVYNNAPKEY---YETGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLHSKGATVVEDIHIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D +L + FP + + + AG P+I++PA E P G Sbjct: 416 DFVLEKYDLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 461 ITLASTAFSEGTLIKLAYAFEQ 482 >gi|297470464|ref|XP_002683966.1| PREDICTED: Os04g0182900-like, partial [Bos taurus] gi|296491788|gb|DAA33821.1| Os04g0182900-like [Bos taurus] Length = 349 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 110/309 (35%), Positives = 170/309 (55%), Gaps = 30/309 (9%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKAR-AAAEESDKRIINGDARD 70 R+ + ++ + L +Y+Q A++ + ++ A IE+ + AAA + ++R +G R Sbjct: 2 RMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPDALKEAAARDRERR--DGRLRG 59 Query: 71 -LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD + + T A S L GFRP ++ + ++L D GAV+LGK N+ E+A Sbjct: 60 PLHGIPLLLKDNISAAPMATSAGSLALQGFRPD-DAYLVRRLRDAGAVVLGKTNLSEWAN 118 Query: 130 GSSNETSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 N++ IS W + + +P GSS GS+ AVA L + +IGT+T GS Sbjct: 119 FRGNDS------ISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTETDGS 172 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 I PA+ G VG+KPT G SR GII + S D AG + R+V D+A +L AIAG D+ D Sbjct: 173 IVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAGRDDADP 232 Query: 244 TCVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGA 297 +P V DY LD Q ++G +G+ + L Y + P I +Q + L+ AGA Sbjct: 233 ATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLI----EQAATELRRAGA 288 Query: 298 KIVEISLPH 306 +V + LP+ Sbjct: 289 VVVPVELPN 297 >gi|70949437|ref|XP_744129.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Plasmodium chabaudi chabaudi] gi|56523951|emb|CAH77424.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Plasmodium chabaudi chabaudi] Length = 553 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 139/463 (30%), Positives = 215/463 (46%), Gaps = 71/463 (15%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI +KD TKGI T A S IL ++ Y+STV +KL +GA+++GK +DEFAMG Sbjct: 84 LFGLPIVLKDNIITKGIPTTAGSKILSNYKSSYDSTVVKKLKKHGAIIIGKTRLDEFAMG 143 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPAS 189 S G V +P+ +K+ G S G SA+ G + S+ TDTGGSIR PA+ Sbjct: 144 SCT-----GNVKNPF-----NEKYLSCGGSSGGSASCVGSKILNCSVNTDTGGSIRTPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G +G+KPTYGR SR GII + D G+I V D +ILL ++GYD+ D V+ Sbjct: 194 LCGCIGLKPTYGRISRYGIIPYNEETDVVGLIVNNVYDCSILLDCLSGYDKNDLKSVHEK 253 Query: 250 VPDYERAL------------DQSIQGMTVG-----IPKEYRLDYLSPTIDKTWQQGISWL 292 L D+ ++ M G + K+Y +D + + + + Sbjct: 254 KKKKYHLLLKKYEQSEIFKSDKPLKNMKFGYLSKDLLKKYFVD---DVVCDHYDMVMKNI 310 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 KD G ++ ++ YY+ S A+SN+AR +G+ Y + + + + RS Sbjct: 311 KDMGGILINTNIYKLVEYCYIYYMYSMIVANSNIARMNGINYNIPNINNENNFIAK-LRS 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD----FTEAFEQGVDVILTP- 407 + V RI+ G+ + S +++ + R I ++K E F+Q VD IL P Sbjct: 370 NLIDENVLARIIGGSIISSYFEKNNNKINFRHIFLIVKNKLISRLNEIFDQ-VDFILLPS 428 Query: 408 --------------TTPTSAFPLGKE---------ENNSGSM----GHIYN----DVFTV 436 T+P+ L E NN S+ G +YN ++F + Sbjct: 429 LPRSNNLKEDCNMDTSPSYENCLKSEIDSEKEHDQNNNKKSLCVENGDMYNKYMREIFLI 488 Query: 437 AVNMAGLPAISVPAALCEKKM--PLGLQLIGQPFREETLFSVG 477 ++ G P+I +P+ K + P QL+ E L V Sbjct: 489 ISSITGFPSIVIPSGEFTKNLNEPQSFQLLNSKLNEHELLKVA 531 >gi|257055772|ref|YP_003133604.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] gi|256585644|gb|ACU96777.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] Length = 441 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 62/438 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G PI +KD A +G+ A S L+G+RP +T ++L D GAV++G+ NM E A G Sbjct: 37 LAGTPIVVKDNVAVEGLPLTAGSPALEGYRPSRSATTVRRLLDAGAVVVGQTNMHELARG 96 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +++ + YGPV +PWR+ GGSSGG++AAVA A +GTDT GS R PA+ Sbjct: 97 TTSHNAVYGPVRNPWRA-----SRMAGGSSGGTAAAVAAGAVPAGLGTDTSGSGRIPAAM 151 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP- 249 G VG + + R G++ +PS D ++ TV + A+ +AG E + +P Sbjct: 152 CGCVGFRASASRYPGDGVVHLSPSADAVTVMASTVEEVAVFDAVLAGMSESGSDVGEVPG 211 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA------------ 297 +P LD S + +G+P+E L P +++ ++ + L+ AG Sbjct: 212 LP----PLDPST--VRLGVPREACWRLLDPEVERVCEEALEKLRAAGVRVVDVDLDDLAE 265 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARY----DGVRYGLRVEGKDILEMYENTRSI 353 + +E+++ T Y + Y+ S AR D R+ D+++ + Sbjct: 266 ESLEVNVSMTMYEMYEYW--------SRFARRHLDCDYATLVTRLGSPDVVKAF------ 311 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTS 412 G+ V S Y R ++ + F F EQ +D ++ P P + Sbjct: 312 ------------GSMVDGSPITPDDYAALRALKDEVIARFATLFAEQRLDALVFPPVPVT 359 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVN-----MAGLPAISVPAALCEKKMPLGLQLIGQP 467 A +G E G Y+ + N AGLPA+SVPA L +P+G++L G Sbjct: 360 APEVGAETVT--IRGREYDLLMATIANETMAPSAGLPAVSVPAGLAADGLPVGIELDGPT 417 Query: 468 FREETLFSVGQIIEKEAG 485 + L ++ +++E+ G Sbjct: 418 GSDRRLLAIAELVERCVG 435 >gi|198422857|ref|XP_002123113.1| PREDICTED: similar to glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Ciona intestinalis] Length = 601 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 136/507 (26%), Positives = 230/507 (45%), Gaps = 61/507 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKR 62 NF + + +S + + + ++ I AI NS ++NA ++ +A + AA +D+ Sbjct: 132 FNFNCAQDFVRQYKSGETTPTAVAENAIIAITNS-EKLNAIVKYDIASIKKQAAASTDRY 190 Query: 63 IINGDARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 N ++G+ I +KD FA KG HT S+ +S V K+ D G ++L Sbjct: 191 RTNTTLSPIDGVIIVVKDEFAVKGFPHTSGSSYRHPNEPAKADSGVVTKMRDLGCIVLAV 250 Query: 122 LNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +NM EF +G+S N +G +P+ D F+ G SSG +SA AG + IGTD Sbjct: 251 VNMHEFGIGTSGNNPNKGFGACRTPYH----LDHFSGGSSSGCASAVGAG-IATMGIGTD 305 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G VG+KPT+ R + G+ + S+ AG I VRD A+ ++G Sbjct: 306 GGGSIRIPSAYCGVVGLKPTFARVTLAGVDGLSYSVGHAGPICNCVRDVALFYALLSG-- 363 Query: 240 ECDATCVNLPVPDYERALDQ----------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 P P+Y L Q ++ G+ +GI + Y D SP + K + Sbjct: 364 ---------PDPEYPLGLKQPKVKLPKFGGNLDGIKIGIDRRYFKD-CSPDMFKICSDAL 413 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR-YDGVRYGLRVEGKDILEMYE 348 L+ +GA + A+ I +E S+N++ +D + V + + + Sbjct: 414 PLLESSGATLETAEFAEITDICIAHRITILSEMSTNISSDFDNEFNAISVPSRTLFALGR 473 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 + + F Q K R RA +I TE F + D ++TPT Sbjct: 474 SITAQDFIQANKQRT-----------------RAIEI--------TEEFFKKYDALVTPT 508 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 T +A + +E G+ + V F N G+PAI+VP +K +P+G Q++ Sbjct: 509 TGQTAPLIHSDELAVGATNPSQDGVNMRFVALGNFTGIPAITVPVGYNDKGLPVGFQIMC 568 Query: 466 QPFREETLFSVGQIIEKEAGYFRPHKW 492 +RE+ + + +E++ +P + Sbjct: 569 AWWREDIALQIAEYLERKIALQKPRIY 595 >gi|317127143|ref|YP_004093425.1| amidase [Bacillus cellulosilyticus DSM 2522] gi|315472091|gb|ADU28694.1| Amidase [Bacillus cellulosilyticus DSM 2522] Length = 484 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 154/493 (31%), Positives = 230/493 (46%), Gaps = 46/493 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIEN-SNSQMNAYIEVVAQKARAAAEESDK- 61 L ++SE +L +++++ ELV Y+ I ++NA IE+ + A AE DK Sbjct: 14 LTSASLSEINHKLVREELTSRELVLMYLYRIATLDKDKINAIIEINPE-ALQTAEAMDKE 72 Query: 62 RIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G L GIP+ IKD AT +HT A S L ++ + +KL + GA++LG Sbjct: 73 RAVKGPRGKLHGIPVLIKDNIATNDKMHTSAGSVALADSFALKDAFIVKKLREAGAIILG 132 Query: 121 KLNMDEFA--MGSSNETSYY---GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 K NM E+A MG + T Y G V +P+ S +F GGSS GS AA+A + Sbjct: 133 KTNMTEWANFMGENMPTGYSSRGGQVTNPYGS-----EFIVGGSSSGSGAAIAAGFATVA 187 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IGT+T GSI PAS VGIKPT G SR GII + + D AG +T+TV D+ +LL I Sbjct: 188 IGTETSGSILSPASQNSLVGIKPTVGLISRNGIIPISHTQDTAGPMTKTVEDAVLLLNGI 247 Query: 236 AGYDECD---ATCVNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 G DE D T L D+ L ++G +GI +E DYLS K I Sbjct: 248 VGVDENDPITKTNHKLQNIDFTTFLRSDGLKGAKIGIAREVYFDYLSEDKAKVINGAIEK 307 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 +K GA +V+I++P T+ + + N + DI+ EN R Sbjct: 308 IKTLGADVVDITIPSTKSKWNIDVLKYEFKVGINTYLKEFTTCAKISSLTDIISFNENNR 367 Query: 352 SI--GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + +GQ ++++ + S + Y+ T ++ D A + G+D L Sbjct: 368 DVMLKYGQ----KMLLESNATSGTLTEKEYI------TSLEHDQYHAKDNGIDAALKEVD 417 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 FP NN G+ ++ AG P+I++PA ++ P+G+ F Sbjct: 418 AI-VFP-----NNFGA---------SIPAK-AGYPSITIPAGFTDEGEPVGITFTSAAFS 461 Query: 470 EETLFSVGQIIEK 482 E L S E+ Sbjct: 462 EGILLSFAYAYEQ 474 >gi|134095844|ref|YP_001100919.1| putative amidase [Herminiimonas arsenicoxydans] gi|133739747|emb|CAL62798.1| Putative amidase [Herminiimonas arsenicoxydans] Length = 469 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 142/485 (29%), Positives = 231/485 (47%), Gaps = 44/485 (9%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 RD L S+ ISAVE+V + + +E SQ+N + + ++ A AAAE +D+ ++ G+ L Sbjct: 15 RDALLSRQISAVEVVQNSLGRLEQVESQLNCFSTLTSELALAAAEHADQSLLRGEVLGPL 74 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+PI +KD A G+ S ++ ++ ++ GA ++G EF + Sbjct: 75 HGLPISVKDLIAVGGVRQTFGSRAMENNIAQVDAPSVARVKAAGACIVGISTTSEFGCKA 134 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++ G +PW + +K TPGGSS G++A+VA + ++GTD GGSIR+P+SFT Sbjct: 135 VGDSPLTGITRNPW----NIEK-TPGGSSCGAAASVAAGVTPFALGTDGGGSIREPSSFT 189 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G GIK + R S P+L G + R+VRD+A+LL IAG+D D V VP Sbjct: 190 GLFGIKAQFARVPVFP-ASATPTLAHVGPLARSVRDAALLLSVIAGHDARDPFSVAEDVP 248 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSP--TIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 D+ A D I+GM + + L Y P I + + + + G +I+E+ Sbjct: 249 DFLAACDAPIKGMRLAWSPD--LGYAKPDAEIVRITEAAVKKFEALGCEIIELK------ 300 Query: 310 ALPAYYIISPAEASSNLAR-YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 I A LA Y GV L +D E+ + + + ++ +Y Sbjct: 301 -----GGIGSDPADMWLAEFYAGVGTRLHSVMRDQRELLDPVVVATLDKALDQSLL--SY 353 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 S+ ++ + R K+R++ FT D++LTPT P +A +G + + + Sbjct: 354 Y--SKVFERYQFR-EKMRSM----FTS-----FDLLLTPTAPIAAPNVGVDVPAQFADRN 401 Query: 429 IYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 I + +T N+ G PA S+P + +P+GLQL+ RE +F E Sbjct: 402 ICSWQYYTYPFNLTGQPAASLPVGFTQSGLPVGLQLVANINRETDIFRAAAAFEAV---- 457 Query: 488 RPHKW 492 H W Sbjct: 458 --HPW 460 >gi|223938003|ref|ZP_03629902.1| Amidase [bacterium Ellin514] gi|223893404|gb|EEF59866.1| Amidase [bacterium Ellin514] Length = 558 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 134/506 (26%), Positives = 224/506 (44%), Gaps = 85/506 (16%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL + ++ E ++S+ I++V+L +++ ++ ++ + + A A ++D Sbjct: 111 MDELAYYSIGELGALIKSRQITSVQLTSFFLERLKRYGPKLECIVTLTESLALQQARQAD 170 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I G R L GIP G+KD TKGI T + ++TV ++L D GA+++ Sbjct: 171 KEIAAGKYRGPLHGIPFGVKDLLTTKGIPTTWGTAPYKNQIIDEDATVVKRLQDAGAILV 230 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 KL+M E A G E Y G +PW D + GSS G +AA + L +IG++ Sbjct: 231 AKLSMGELAWG---EVWYGGMTRNPWNLKDGS-----SGSSAGPAAATSAGLVPFAIGSE 282 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P G G++P+YGR SR G ++ S+D+ G I RTV D AI+ I G D Sbjct: 283 THGSIISPCDRCGITGLRPSYGRISRTGAMALTWSMDKLGPICRTVEDCAIVFNTIYGPD 342 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG---------IS 290 D T +LP +A Q + R+ YL + ++G ++ Sbjct: 343 GIDQTLCDLPFNYEAKARWQKL-----------RIAYLKKDFEN--EKGERKENDAATLA 389 Query: 291 WLKDAGAKIVEISLPHTQYALPAY---YIISPAEASSNLARYDGVRYGLRVEGKDIL--E 345 L+ GA +V I LP LP + ++IS A A +D L + G+D L Sbjct: 390 KLRSLGATLVPIELPK----LPIHDISFVISVEGA----AAFD----DLTISGRDDLMKR 437 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVI 404 ++T F + +R + + Y++A ++R L+ ++ T + VDV Sbjct: 438 QGQHTWPNAFRE--------------ARLFPAVEYIQATRVRYLLIQE-TARVLKDVDVF 482 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 + P+ G E + N+ G P + VP + P + I Sbjct: 483 VAPSLA------GDSE---------------LLTNLTGHPCVVVPNGFSKAGTPTSICFI 521 Query: 465 GQPFREETLFSVGQIIEKEAGYFRPH 490 G F+E + + + + + + H Sbjct: 522 GNLFKEAEILEIAKAYQDSTDFHKKH 547 >gi|84502155|ref|ZP_01000303.1| amidase [Oceanicola batsensis HTCC2597] gi|84389515|gb|EAQ02234.1| amidase [Oceanicola batsensis HTCC2597] Length = 791 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 122/426 (28%), Positives = 201/426 (47%), Gaps = 23/426 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I +KD G+ S I++G+ P ++T+ ++ D GA++ GK + + F + Sbjct: 376 LRGKRIALKDTICLAGVPLMNGSSIMEGYTPEIDATIVTRMLDEGAIIAGKAHCENFCLS 435 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T+ GPV +PW+ + GGSS GS+A VA +I D GGS+R PAS Sbjct: 436 GGSHTNAKGPVHNPWKR-----GYMAGGSSSGSAALVAADEVDMAIAGDQGGSVRIPASN 490 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G G + ++D G +T+TV D+A+LL+ +AG D D N V Sbjct: 491 CGVYGMKPTHGLVPYTGAMPIEQTIDHLGPVTKTVADNALLLEVLAGPDGLDPRQYNPTV 550 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL + G+ +GI KE + P +D+ Q ++ GA++ ++S+P Sbjct: 551 YSYTEALGRGAHGLRIGILKEGFAHPNSEPDVDQKVLQAAERFRELGARVEDVSVPEHHT 610 Query: 310 ALPAYYIISPAEASSNL--ARYDGVRY-GLRVEG-KDILEMYENTRSIGFGQEVKHRIMI 365 A+ A+ I+ + G Y GL + D + ++N R+ +K + + Sbjct: 611 AMDAWTAITLEGLQDGMMWGNSTGTNYKGLFLPSMTDHMSQWKN-RADELSHSLKACMFV 669 Query: 366 GTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G + + R Y Y +A+ I + A +Q D++L PT P P Sbjct: 670 GEH--AQRQYRGRFYGKAQNIMRKCNDRYLAALKQ-YDLLLLPTLPVKPQP---HPPADC 723 Query: 425 SMGHIYNDVFTVAVNMA----GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S+ F + N A GLPA+S+P L E +P+GL L+G + E ++ Sbjct: 724 SLSLYVQRAFEMTANTAPFNGGLPAMSLPCGLSE-GLPIGLMLVGPNYGEMKIYQAAHAF 782 Query: 481 EKEAGY 486 E+ + Sbjct: 783 EQSGDW 788 >gi|94310708|ref|YP_583918.1| amidase [Cupriavidus metallidurans CH34] gi|93354560|gb|ABF08649.1| Asp-tRNA Asn / Glu-tRNA Gln amidotransferase A subunit or related amidase [Cupriavidus metallidurans CH34] Length = 475 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 127/503 (25%), Positives = 227/503 (45%), Gaps = 50/503 (9%) Query: 1 MSE-LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 MSE L F++ +E D +R K +S V++ + + E ++N +I + A++A +A ++ Sbjct: 1 MSESLCFLSATELADAIRHKRVSPVDITSAVLARAERLQPELNCFITIDAERAMESARQA 60 Query: 60 DKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 ++ ++ G L G+P +KD T+G+ T + L P ++ +L + GA++ Sbjct: 61 ERLVMAGGPLGLLHGVPFTVKDIVNTQGVRTTFGAAPLRDNVPQQDAVAVARLREQGAIL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK EF ++ +G + W + + T GGSSGG++ AVA + ++ T Sbjct: 121 IGKTTTPEFGSKCLTDSPLFGRTRNAWSA-----QRTSGGSSGGAAVAVASGIAPLAVAT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG------IITRTVRDSAILL 232 D GGS R PA+ G VGIK + G +I + + D G TRTV D+ +++ Sbjct: 176 DGGGSTRIPAACNGVVGIKQSNG------VIPHSQAQDLYGNQTYVTPTTRTVADTGLMM 229 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISW 291 A+AG CD + +P DY A QG G R+ Y L+P Sbjct: 230 AAMAGEHACDPWSIGVPKADYVDA--ARAQGDLRG----KRILYCLAPPGRPVAADVARA 283 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + A + + + + I P + N + R +I+E + + Sbjct: 284 FERGLAALAGLGAELEPFDGDGFNDIEPLWRAINHTVW-------RTRFVEIVERHRDEL 336 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S F ++V+ + +D L R ++ L++R D++ PT Sbjct: 337 SATFVRQVESAAQVSGVAYQQAMFDRSRLFQR-VQALLER---------ADLLAMPTIMR 386 Query: 412 SAFPLGKEENNSGSM-GHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 +A P+ ++ + + GH++ +V +T+ NM G PAIS+P +P+GLQL+ Sbjct: 387 TALPIDQDLFGTIEIDGHVHENVRANWFPWTMPFNMTGHPAISLPCGFGSDDLPIGLQLV 446 Query: 465 GQPFREETLFSVGQIIEKEAGYF 487 G+ R+ L + E G+ Sbjct: 447 GRFRRDTELLRCAALFESAHGFL 469 >gi|325271129|ref|ZP_08137689.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Pseudomonas sp. TJI-51] gi|324103734|gb|EGC01021.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Pseudomonas sp. TJI-51] Length = 503 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 135/495 (27%), Positives = 230/495 (46%), Gaps = 43/495 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S L ++ ++ + SK +++ E+V ++Q I+ + Q+NA+I V ++A A A++ D Sbjct: 25 LSPLYTLSAEQTAQAICSKQVTSQEVVKYWLQRID-ARPQLNAFIAVDHRRALAEAKKVD 83 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R+ +G + R L+G+PI IKD G A + L F P + + KL GA++L Sbjct: 84 ARLSSGRECRPLDGVPIAIKDNIQVVGFANTAGTPALRHFMPKANAPIIDKLEAAGAIIL 143 Query: 120 GKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 GK NM E A G + N + VI + D + GSS GS+ A+ + ++G Sbjct: 144 GKTNMHELAFGVTGYNLGYHTKDVIGIRNAFDQSRISG--GSSSGSAVALGARMVPIALG 201 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGS R+P + G +G +PT GR S GI +P+ D AG + TV D +L ++G Sbjct: 202 TDTGGSTREPCALNGCLGFRPTVGRYSGQGITPISPTRDTAGPMANTVGDVVLLDSILSG 261 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + A N G+ +G+P + D L + K Q + L+ AG Sbjct: 262 KNPLPAKPAN---------------GIRLGLPDFFWAD-LDSDVGKAASQALEKLQAAGV 305 Query: 298 KIVEISLPH-TQYALPAYYIISPAEASSNLARY-----DGVRY---GLRVEGKDILEMYE 348 ++V + +P + A ++ EA L+ Y GV + +V D+ ++ Sbjct: 306 QVVPVQMPKLKELAAAVATPVAIVEAKKALSAYLKEQNTGVSFDQLASQVASPDVKAIFN 365 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 + +++ G + +S ++ L KR F E +D +L P Sbjct: 366 DMVVPVLVPGADGKMVAGQPIYDQAIKES----LPRLEELYKRTFA---ENKIDALLFPA 418 Query: 409 TPTSAFPLGKEENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQ 466 P A G E + I N + V M GL S+P L EK K+P+G+++ Sbjct: 419 VPEVAIKTGPEAGTPENFLRIIRNSDPSSNVKMPGL---SIPIGLGEKSKLPVGMEIDSL 475 Query: 467 PFREETLFSVGQIIE 481 P +++ L ++ + +E Sbjct: 476 PGQDDELLAISRTLE 490 >gi|302527689|ref|ZP_07280031.1| predicted protein [Streptomyces sp. AA4] gi|302436584|gb|EFL08400.1| predicted protein [Streptomyces sp. AA4] Length = 673 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 129/434 (29%), Positives = 194/434 (44%), Gaps = 35/434 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KDC A G+ A S +L FRP +STV +L GA ++ MDE + Sbjct: 259 LNGFRVAVKDCVAVSGVPMTAGSALLADFRPDADSTVVARLRAAGARIVATTRMDELGLA 318 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL----CAASIGTDTGGSIRQ 186 + +T G V +P F P ++GGSSA A L ++G D GGS+R Sbjct: 319 AGGDTGPGGAVRNP---------FDPARTAGGSSAGCAAALHYPGVDVAVGADQGGSVRV 369 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA++ G G+KPT G G + ++D G + RT D A +L +AG D D V Sbjct: 370 PAAWCGLFGLKPTRGLVPATGSLGIDHTVDHLGPLARTTADLARVLDVLAGPDGADPRQV 429 Query: 247 NLPVP-DYERALDQ---SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LP P DY A+ + S+ G+ +G+ RL +P + + ++ L GA +V + Sbjct: 430 GLPEPVDYSAAVAEAPASLAGVRLGL---VRLPGTTPEVQTALELTVAALTKLGATVVPV 486 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR----VEGKDILEMYENTRSIGFGQE 358 LP A A + E ++ L G Y E + L R+ G Sbjct: 487 DLPELADAG-ALCFGTTVEGTAALLASGGNGYQWLGQYWPELANGLARGWRERAGDLGLA 545 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-- 416 K ++ G+Y L Y A+ R + R + A + GVD +L PTTP P+ Sbjct: 546 AKAVLLAGSY-LQETYRGEWYAIAQNARGRLVRGYVRALD-GVDALLAPTTPGLPHPVEV 603 Query: 417 -GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E + N T N+ G PA+S+P A +P+G+ L G+ F + L Sbjct: 604 ASPIERVRRGWAVLAN---TAPANLTGHPALSMPLAEA-AGLPVGVMLTGRHFEDARLLR 659 Query: 476 VGQIIEKEAGYFRP 489 + + E+E G RP Sbjct: 660 IAAVCERELG-IRP 672 >gi|224081068|ref|XP_002306283.1| predicted protein [Populus trichocarpa] gi|222855732|gb|EEE93279.1| predicted protein [Populus trichocarpa] Length = 611 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 137/480 (28%), Positives = 225/480 (46%), Gaps = 50/480 (10%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 S +I+ + + + AI S+S M +I A+ A+ES +R G+ L+G Sbjct: 146 SGEITPCMVAEQLVTAIRESSSPPMDMAFFINYDAEDILRQAKESTRRYERGEPISALDG 205 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI IKD T + L FR ++ +L GAV++GK NM E G+S Sbjct: 206 VPIAIKDEIDCSPYPTTGGTKWLHKFRSCKGDACCVMRLRSCGAVIIGKTNMHELGAGTS 265 Query: 133 NETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +YG +P + PG GSS GS+A VA LC ++G D GGS+R PA Sbjct: 266 GINPHYGATRNP---------YNPGMISGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPA 316 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG KPT+GR G++ ++ G++ T+ D+ I+ AI G T + Sbjct: 317 ALCGVVGFKPTFGRVPHSGVLPLNWTVGMVGVLAGTIEDAFIVYAAINGPLPSHETSA-I 375 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDA-GAKIVEISL 304 P+P L QS ++ I Y ++ S I Q + L + G K V++++ Sbjct: 376 PLPKVYFPLLQSTNSVSNVILARYG-EWFSDCGDDIRTCCSQALHQLSEKFGWKTVDVTI 434 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A+Y+ +E ++ L+ Y LE +N S G ++ R+ Sbjct: 435 PDIESMRLAHYLTIGSECTAALSSY--------------LEKLDNAES---GWDL--RVA 475 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + Y S Y++A+K+R+ + F DVI+TPT +A+P+ + +G Sbjct: 476 LCVYGSFS---GEEYIKAQKLRSR-QMQFHRNIFTKADVIVTPTVGVTAYPIFDDALKTG 531 Query: 425 SMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +I + +A N GLPA++VP + +P+GLQ IG+P+ E TL + ++ Sbjct: 532 ELDYINGAALVRYQIAGNFLGLPAVTVPVGYDKNGLPIGLQFIGRPWSEPTLIHIAYAMQ 591 >gi|187477765|ref|YP_785789.1| amidase [Bordetella avium 197N] gi|115422351|emb|CAJ48876.1| putative amidase [Bordetella avium 197N] Length = 479 Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 131/484 (27%), Positives = 229/484 (47%), Gaps = 35/484 (7%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKR 62 L+ ++ + R S ++S VE+ S ++ EN N +NA + +A RAAA+ + Sbjct: 15 LHQLSFEKIRALYASGEVSPVEVTYSALRHAENVNLSINALAMLDHDRALRAAAQSQTRW 74 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVMLGK 121 + L+G+P+ +KD A KG T+ S + G P STV Q+L + G + LGK Sbjct: 75 RLGRPLGPLDGMPVTVKDFAAVKGWPTRRGSAVSSG-EPQATSTVFVQRLLNAGMIPLGK 133 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EF + ++ YG +PW + TPGGSSGG +AAV+ + S+G+D G Sbjct: 134 TRAPEFNWKTVTDSPAYGITRNPW-----NIQLTPGGSSGGCAAAVSAGVVRVSMGSDAG 188 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R P+SFTG +G KP++GR + S + G I ++R+ A +++ AG Sbjct: 189 GSVRIPSSFTGLIGFKPSFGRIPASPLPSAFSQVVHTGPIGASMREIAEVMRVAAGPSGK 248 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIV 300 D T + D +AL + +T+G+ R S + + I+ ++ +G + Sbjct: 249 DWTSFTGSIKDDVQALSDDAKRLTIGVLDASRWSASSCEEVRRGMSDTIALIESSGFNVE 308 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + + ++ A A++ L Y R G + + + ++ G VK Sbjct: 309 TVD-----------FDVAAATATA-LIFY---RVGCETSLRGVPQAEQSKVDPGLFDFVK 353 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-E 419 V + +D +L A ++R L E F++ VDV++ PT P F G+ Sbjct: 354 P-------VEGLKLFD--FLEACRLRDLYANALAELFDR-VDVLMLPTMPILPFEAGRLS 403 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S + + FT A N+A +PA+S P +P+G+Q + + ++ L ++G Sbjct: 404 PEGWHSNDPMSWNPFTPAFNIAQVPAMSYPVWPEGSTLPVGIQFVAPRYCDDRLMTLGAW 463 Query: 480 IEKE 483 +E++ Sbjct: 464 LEQQ 467 >gi|313679055|ref|YP_004056794.1| amidase [Oceanithermus profundus DSM 14977] gi|313151770|gb|ADR35621.1| Amidase [Oceanithermus profundus DSM 14977] Length = 568 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 128/478 (26%), Positives = 213/478 (44%), Gaps = 36/478 (7%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 +S + E+ + ++ A N Q++A+I V RA A S R G+ L+G+P Sbjct: 116 KSGKTTPEEVAERFLAAYAELNPQIHAFIAVNPDDVRAQAAASAMRWRRGEPLGPLDGVP 175 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD G T + L ++T +L GAV++GK NM E + Sbjct: 176 VAVKDELDVVGYPTTVGTAFLRDVASE-DATAVARLRAAGAVIVGKANMHELGANPTGHN 234 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++G +P+ T SS GS+AAVA L ++G D GGSIR PA+ TG G Sbjct: 235 PHHGHAKNPYDPARDTGG-----SSSGSAAAVASGLVPLALGADAGGSIRVPAALTGVYG 289 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +K T+G S G S+ G + + D A+ + IAG D D + PVP+ Sbjct: 290 LKATFGGVSEHGAYPVCWSVAHVGPLGASAYDVALAHRLIAGPDPKDPHTASAPVPEAPD 349 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + G+ VG+ + D+ P + + + ++ +++AGA+IVE LP A A+ Sbjct: 350 WNREDLSGLKVGVWPAW-FDHAEPGVVEAARAALARMEEAGAEIVEFELPGLDDARVAHA 408 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 + E G+ E+ R++ + +I Sbjct: 409 VTVLVEM-----------------GRSFQRTQEHWRALAPATRINLKI-------GQSAA 444 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT--PTSAFPLGKEENNSGSMGHIYNDV 433 + Y+ A+++R + E + VD+I TPTT P P E + +G + + Sbjct: 445 GADYVAAQQVRARMVAALDEVLGR-VDLIATPTTAVPAPLIPKAAESDGISDLGTVTQLM 503 Query: 434 -FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 F N+ G P++S+PA + +P+GLQLIG+ + E TL ++E+ RP Sbjct: 504 RFIFLTNLTGHPSLSLPAGYTVEGLPVGLQLIGRAWGERTLMEAAGVLERAGERRRPQ 561 >gi|251788510|ref|YP_003003231.1| amidase [Dickeya zeae Ech1591] gi|247537131|gb|ACT05752.1| amidohydrolase, AtzE family [Dickeya zeae Ech1591] Length = 470 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 132/490 (26%), Positives = 222/490 (45%), Gaps = 56/490 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIIN 65 +++ + L + +SA ++ + IE N +NAY V AQ+ A D KR ++ Sbjct: 6 LSIRSLQAELAAGHLSATDIARDTLARIEQHNPAVNAYTAVTAQRMLTEANGVDLKRRLS 65 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGKLN 123 L G+P +K+ F G T A + + RP ++ ++L GA++ G LN Sbjct: 66 EPLPALAGVPYAVKNLFDVAGETTLAGARLFSQ-RPAAAQDAFAVRQLQAQGALLSGLLN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 MD +A G + E S+YG +P + + GGS+ +A + F S+G+DT GS Sbjct: 125 MDAYAYGFTTENSHYGATRNP-HDLTRIAGGSSGGSAAAVAAGLVNF----SLGSDTNGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PAS G G+KPT+GR SR G F SLD G + R+V D A++ + G D D Sbjct: 180 IRVPASLCGIFGLKPTFGRLSRQGTQPFVGSLDHIGPLARSVDDLALVYDVLQGRDPADR 239 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKIVE 301 + P L ++ + P R+ Y + D+ + + DA + Sbjct: 240 FQADQP-------LRSTVPSLADAAPLRSRVLGGYFAQWCDEQATAAVQQVADALNADHD 292 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + L + A A +I+S +E G L +T F + Sbjct: 293 VILDNAALARTAAFILSASEG-----------------GNQYLPALHDTPD-QFEPLSRE 334 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE- 420 R++ G + + + Y++A++ R +R+ F D+++ P TP A P+G+E Sbjct: 335 RLLAGAMIPA-----AWYVQAQRFRDHFRREVLALFND-TDLLIAPATPCPATPIGQETM 388 Query: 421 --NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 N++ SMG + T ++ GLP ++VP A +P+G+QLI P+RE+ Sbjct: 389 RINHTDLPIRASMG-----MLTQPISFVGLPVVTVPLA-TAGGLPIGVQLIAAPWREDVA 442 Query: 474 FSVGQIIEKE 483 +E++ Sbjct: 443 LRAAWHLEQQ 452 >gi|229004834|ref|ZP_04162564.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus mycoides Rock1-4] gi|228756387|gb|EEM05702.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus mycoides Rock1-4] Length = 491 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 145/496 (29%), Positives = 229/496 (46%), Gaps = 54/496 (10%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + ++++ ELV Y+ I + ++N+ +E+ A +R I G L Sbjct: 22 MENGELTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEGLDHERKIKGVRGPLH 81 Query: 73 GIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD T +HT A + L+ +R ++++ + +KL + GAV+LGK NM E A G Sbjct: 82 GIPILLKDNIETNDSMHTSAGTIALENYRSNHDAFLVEKLREAGAVILGKANMTELANGM 141 Query: 132 SNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S E +S G VI+P+ S D D GGSS GS+ AVA L S+GT+T SI Sbjct: 142 SFEMWAGYSSRGGQVINPYGSGD--DDLFVGGSSTGSAVAVAANLTVLSVGTETDASILS 199 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G D+ D Sbjct: 200 PAVQNSVVGIKPTVGLVSRKGIIPFTYSQDTAGSFARTVTDAAILLGSLTGIDQLDPATY 259 Query: 247 N---LPVPDYERALDQS-IQGMTVGIPKEYRLDYLSP--TIDKTWQQGISWLKDAGAKIV 300 DY LD + ++ +G+ + Y ++ +Q I L++ GA ++ Sbjct: 260 KSEGRAQQDYMVYLDSNGLRSAKIGVFNKASESYYESGGYDEELFQNAIQVLRNEGATVL 319 Query: 301 E-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT--RSI 353 E I +P H +++ + +S E +L Y + + V +++ +N +++ Sbjct: 320 EDIEIPSFHREWS----WRVSSYELKHSLDNYLSKLPSNIPVHSISELIAFNKNIEEKAL 375 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS- 412 +GQ R+ G S+ + YL A+ D + EQG+D L + Sbjct: 376 KYGQS---RLEFGK-DFSNTLRNPEYLNAK------LEDLYFSQEQGIDFALKKYDLDAI 425 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP + + + AG P+I+VPA + P G+ F E T Sbjct: 426 LFP---------------SYIGSTICAKAGYPSIAVPAGYMKSGRPFGITFASTAFSEGT 470 Query: 473 LFSVGQIIEKEAGYFR 488 L + E+ + R Sbjct: 471 LIKLAYAFEQATKHRR 486 >gi|167725148|ref|ZP_02408384.1| indole acetimide hydrolase [Burkholderia pseudomallei DM98] Length = 442 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 129/451 (28%), Positives = 211/451 (46%), Gaps = 43/451 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I +G L G+P IKD T + T+A S L F Sbjct: 20 LAAMTHVAPEIARRAAANVDAQIASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLCFD 79 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ Y+G V +P GGSS Sbjct: 80 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIA-----GGSS 134 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + A +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 135 GGTACAVAAGI-AFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 193 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G D ++ G+ VG+P D L P Sbjct: 194 IAHGIDDLLLLDAVLTG--------------DAGEPAPVALAGLRVGVPDAPYFDGLDPA 239 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A+ + EA +A ++ + Y R Sbjct: 240 VAELTERALAALTDAGARLIPLA---------AHALHEADEACGFPIAGFEALAYWRRFS 290 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + ++ + Y A + R + +AF Sbjct: 291 AERLDLPFAEFVARLG-SDDVRHLFRM---LIDAPPSSDAYAAAIDVLQSTVRWYDQAFH 346 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAAL 452 + GVD I PT A PL + + S + ++ V T + G+P++S+PA L Sbjct: 347 RTGVDCIALPTVQCDA-PLVTDSGHDLPSDAAYALFTRVIRQTGPATLGGVPSVSIPAGL 405 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 406 SKHTGVPVGLMLEGPAGNDRRLLAIAREVER 436 >gi|294341794|emb|CAZ90223.1| putative Glutamyl-tRNA(Gln) amidotransferase subunit A [Thiomonas sp. 3As] Length = 459 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 140/480 (29%), Positives = 221/480 (46%), Gaps = 58/480 (12%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPI 76 S +ISA+E+ + + I + +NA+ + AQ+AR A D R L G+P Sbjct: 22 SGEISALEVTEQALARIAAVDGAINAFTAITAQRARDEARRIDALRAQGAPLPPLAGVPY 81 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +K+ F G+ T A S +L P ++ + Q++ GAV++G LNMDEFA G + E Sbjct: 82 AVKNLFDIFGLTTLAGSKLLATQSPATNDAVLVQRMQAAGAVLVGALNMDEFAYGFTTEN 141 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S+YGP +P D T GSSGGS+AA+A + ++G+DT GSIR P+S G G Sbjct: 142 SHYGPTRNPH---DPTRSAG--GSSGGSAAAIAAGMVPLALGSDTNGSIRVPSSLCGIFG 196 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 IKPT+GR SR G F +LD G R+V D A+ +A+ C P P E Sbjct: 197 IKPTFGRLSRSGSYPFVYNLDHLGAFARSVDDLALCYEAL---------CAGEP-PRSEA 246 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L QS + VG Y D+ P ++ + +A ++ + A A + Sbjct: 247 LLRQSDTPLRVGQLGGYFDDHAGPQA----REAVGMAAEALGARDPVNWVGVEAARSAAF 302 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 +I+ AE + +Y D++E + R+ G+ + + Sbjct: 303 LITAAEGGQLHLDHLRTQY-------DLMEPLS-----------RDRLAAGSMLPA---- 340 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL--------GKEENNSGSMG 427 + Y +A+++R E F + D+++ TP SA PL G+ +MG Sbjct: 341 -AWYAQAQRVRARFHARALELFSR-YDLLIAAATPVSAQPLDSEGFELDGRMLPTRANMG 398 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 + T ++ GLP ++ P MP+G+QLI P+RE+ +I+E F Sbjct: 399 -----LLTQPISCIGLPVVAAPIRHAPGAMPIGVQLIAPPWREDIALRAAKILESAGVAF 453 >gi|228991092|ref|ZP_04151052.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus pseudomycoides DSM 12442] gi|228768628|gb|EEM17231.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus pseudomycoides DSM 12442] Length = 491 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 148/496 (29%), Positives = 230/496 (46%), Gaps = 54/496 (10%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + ++++ ELV Y+ I + ++N+ +E+ A +R I G L Sbjct: 22 MENGELTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEGLDHERKIKGVRGPLH 81 Query: 73 GIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD T +HT A + L+ +R ++++ + +KL + GAV+LGK NM E A G Sbjct: 82 GIPILLKDNIETNDSMHTSAGTIALENYRSNHDAFLVEKLREAGAVILGKTNMTELANGM 141 Query: 132 SNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S E +S G VI+P+ S D D GGSS GS+ AVA L S+GT+T SI Sbjct: 142 SFEMWAGYSSRGGQVINPYGSGD--DDLFVGGSSTGSAVAVAANLTVLSVGTETDASILS 199 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G D+ D Sbjct: 200 PAVQNSVVGIKPTVGLVSRKGIIPFTYSQDTAGSFARTVTDAAILLGSLTGIDQLDPATY 259 Query: 247 N---LPVPDYERALDQS-IQGMTVGI-PKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIV 300 DY LD + ++ +G+ K Y S D+ +Q I L++ GA ++ Sbjct: 260 KSEGRAQQDYMVYLDSNGLRSAKIGVFNKASESYYESGEYDEELFQNAIQVLRNEGATVL 319 Query: 301 E-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT--RSI 353 E I +P H +++ + +S E +L Y + + V +++ +N +++ Sbjct: 320 EDIEIPSFHREWS----WRVSSYELKHSLDNYLSKLPSNIPVHSISELIAFNKNIEEKAL 375 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS- 412 +GQ R+ G S+ + YL A+ D + EQG+D L + Sbjct: 376 KYGQS---RLEFGK-DFSNTLRNPEYLNAK------LEDLYFSQEQGIDFALKKYDLDAI 425 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP + + + AG P+I+VPA + P G+ F E T Sbjct: 426 LFP---------------SYIGSTICAKAGYPSIAVPAGYMKSGRPFGITFASTAFSEGT 470 Query: 473 LFSVGQIIEKEAGYFR 488 L + E+ + R Sbjct: 471 LIKLAYAFEQATKHRR 486 >gi|161520551|ref|YP_001583978.1| amidase [Burkholderia multivorans ATCC 17616] gi|189353261|ref|YP_001948888.1| amidase [Burkholderia multivorans ATCC 17616] gi|160344601|gb|ABX17686.1| Amidase [Burkholderia multivorans ATCC 17616] gi|189337283|dbj|BAG46352.1| amidase [Burkholderia multivorans ATCC 17616] Length = 494 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 132/492 (26%), Positives = 215/492 (43%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A A + D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNAIVALRERDALLAEAADKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYHGWLHGMPQAPKDLAMTKGLVTTCGSRIFSDHVPQADSVGVARMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS YG +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNDVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G +P+ GR R G+ + L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGFRPSQGRVPRWPGVDVYMQQLGIEGPMGRTVGDVAQLLAIQAGYDPNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + + L+ ++G + ++ YL+ P + +QG++ L+D G + Sbjct: 257 LSLADDPAVFAQPLETDVKGTRIAWVGDWN-GYLATEPGVLAQCEQGLATLRDIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------VPERIWRLWLAHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + +++ F + D I PT FP E+ Sbjct: 360 YEVEGLLAMQGAAVFDASVERTAWHQAVLR------FFERYDFIAAPT--AQVFPFDVEQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P ISVP E +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNEAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYERAADW 483 >gi|158423644|ref|YP_001524936.1| amidase [Azorhizobium caulinodans ORS 571] gi|158330533|dbj|BAF88018.1| amidase [Azorhizobium caulinodans ORS 571] Length = 497 Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 142/503 (28%), Positives = 228/503 (45%), Gaps = 43/503 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + E RD + K +S VE++++ + IE N +NA + + + AR AA E++ Sbjct: 1 MTELCDLTALELRDAIAHKRLSPVEVLEACLDRIEAVNPAVNAMVTLDVEGARKAAVEAE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ GDA L G+P+ +KD G+ T S + P ++ +L GA+++ Sbjct: 61 AAVMRGDALGPLHGLPLAVKDTQDVGGMRTTYGSPLFAEHVPAADAGSVARLRAAGAIIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E+A G++ YG +P+ + S GSSGG++ A+A + + G+D Sbjct: 121 GKTNTPEWAAGANTRNPVYGATGNPFDPLKSC-----AGSSGGAAVALACGMTPLATGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA F G VG++P+YG + + SL G + R V D+A++L +A D Sbjct: 176 TGGSLRNPAGFCGIVGMRPSYGLVASERRLHGWSSLSTDGPMARNVSDTALMLSVMASDD 235 Query: 240 ECDATCVNLP-VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D LP P R ++ + + KE RL + T D + ++ Sbjct: 236 SRDPLAYTLPGEPVRARPGRWTVPEINL---KELRLAF---TEDFGFAPTEQQIRRVFRS 289 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG---F 355 V PH A EA + D LR L M+E + Sbjct: 290 RVAALAPHFATA---------EEAGPDCTGADDAFAVLRA--SMFLSMFEKIHAEKPHML 338 Query: 356 GQEVKHRIMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G V + G +Y LS Y RA +T I R + ++F DV+++PT S Sbjct: 339 GPNVTANVKEGLSYSLSD------YARAAATQTRIYRSY-QSFFATHDVLISPTITLSPR 391 Query: 415 PLGK----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P + E + + + + AV +AG PAIS+P + E MP GLQ++G + Sbjct: 392 PWSEPHPAEIDGVPTRSYFHWLALAYAVTLAGHPAISLPLGVDEAGMPFGLQIVGPRGGD 451 Query: 471 ETLFSVGQIIE----KEAGYFRP 489 + V + +E +A RP Sbjct: 452 ALVLGVAKALETVCASDAALCRP 474 >gi|317472534|ref|ZP_07931853.1| glutamyl-tRNA(Gln) amidotransferase [Anaerostipes sp. 3_2_56FAA] gi|316899943|gb|EFV21938.1| glutamyl-tRNA(Gln) amidotransferase [Anaerostipes sp. 3_2_56FAA] Length = 169 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 2/163 (1%) Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL ++GM +GIPK+Y + L + + L++ GA I E L YA+PAYY Sbjct: 6 ALVDDVKGMKIGIPKDYFGEGLDSEVREAVMNAARTLEEKGAVIEEFDLGLVDYAIPAYY 65 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ AEASSNL+R+DG++YG R +G + L MY+ TRS GFG EVK RIM+G++VLSS Sbjct: 66 VIAAAEASSNLSRFDGIKYGYRAKGAEGLHAMYKKTRSEGFGPEVKRRIMLGSFVLSSGY 125 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 YD++YL+A + + LIK++F +AF D+IL P PT+A LG Sbjct: 126 YDAYYLKALRTKALIKQEFDKAFAS-YDLILGPAAPTTARSLG 167 >gi|116694829|ref|YP_729040.1| amidase [Ralstonia eutropha H16] gi|113529328|emb|CAJ95675.1| Amidase [Ralstonia eutropha H16] Length = 476 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 136/485 (28%), Positives = 210/485 (43%), Gaps = 27/485 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL + D + + + + S + + N +NA I + A AAA+ES Sbjct: 1 MDELWKLPAHALTDGYATGRFTPQQALASCLARTAHCNPALNAVIAFDTEGAMAAAQEST 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ L+G+P+ +KD +G+ T S L GF P + +L GA++ Sbjct: 61 ARWRRGEPLGALDGVPVTVKDNLHVRGLPTHWGSRALAGFVPDRDELPVARLRAAGALIF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ EFAM + +G +PW+ TPGGSSGG+ AAVA C ++GTD Sbjct: 121 GKTNVPEFAMQGYTDNLVFGTTGNPWQP-----ALTPGGSSGGAVAAVASGCCPLALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 GGSIR+PAS TG VG KP+ GR R G+ + G + R V D+ + +A+ Sbjct: 176 GGGSIRRPASHTGLVGFKPSPGRLPRGDGLPEIFMRYEVVGPLARCVADAMAMAEALGQP 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D PD R +Q P+ R+ ++ D I+ L A+ Sbjct: 236 DPRD--------PDSRRFAGVPLQ----MPPRPCRVLHVPRFGDHPVDARIAALTGQAAQ 283 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + L HT A+ + A +L G+ + L +G L + FG Sbjct: 284 ALR-ELGHTVDTAQAFDLAEATNAKWSLLSQAGLAW-LVEQGGAQLPFCPPLDAGTFGAA 341 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE-AFEQGVDVILTPTTPTSAFPLG 417 + G + + + +D + ++R+ + F P + P Sbjct: 342 TQANASAGAGLRAVQLFDL-LMAVERLRSELSLLFARYDLLLTPAAAALPWPAAQSHPPV 400 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E +G GH VFT N AGLPAIS+P E +P+GLQL+ P + L ++ Sbjct: 401 IEGREAGPRGHA---VFTAFANAAGLPAISLPCGEAE-GLPVGLQLVAAPAEDALLLAIA 456 Query: 478 QIIEK 482 + E+ Sbjct: 457 RQFEQ 461 >gi|227329365|ref|ZP_03833389.1| amidase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 461 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 139/490 (28%), Positives = 231/490 (47%), Gaps = 43/490 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + +++ + + L++ SA EL + AIE +N +NAY V + A AE D Sbjct: 6 MNRPSALSIRQIQQGLQAGTFSAKELAQQALGAIEQTNPTINAYTHVTGTRMLAEAERID 65 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 G+ L G+P +K+ F G T A + + P ++ ++L GA++ Sbjct: 66 SSRQRGETLPALAGVPYAVKNLFDVSGETTLAGAELFSQRPPVAQDAFAIRQLASQGALL 125 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YGP +P +D+ + GGSSGGS+AAVA L ++G+ Sbjct: 126 SGMLNMDAYAYGFTTENSHYGPTRNP---LDT--QRIAGGSSGGSAAAVAAGLVNFTLGS 180 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR P+S G G+KPT+GR SR G F SLD G + R+ D A++ A+ G Sbjct: 181 DTNGSIRVPSSLCGIFGLKPTFGRLSRHGSHPFVASLDHIGPLARSADDLALVFDALQGR 240 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DE D L+ G+ + Y + S + +Q L GA+ Sbjct: 241 DEHDRFQAKRETQHTAAQLETGSDGLRYAVLDGYFSTWASEEANTAVRQIAQVL---GAQ 297 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFG 356 ++L A A +I+S +E G +Y LR + + F Sbjct: 298 D-SLTLTDAALARSAAFILSASEG--------GNQYLPALRSQPER------------FE 336 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + R++ G + + + Y++A++ R ++ FE D+++ P TP SA + Sbjct: 337 PLSRERLLAGAMIPA-----AWYVQAQRFRNYFRQQTLALFEH-TDLLIAPATPCSATLI 390 Query: 417 GKEE---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+E N++ + T ++ GLP ++VP A +P+G+Q+I P+RE+ Sbjct: 391 GQETMRINDTDLPVRASMGMLTQPISFVGLPVVTVPMA-TASGLPIGVQIIAAPWREDLC 449 Query: 474 FSVGQIIEKE 483 +E++ Sbjct: 450 LRTAWALEQQ 459 >gi|299139249|ref|ZP_07032425.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298598929|gb|EFI55091.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 599 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 128/485 (26%), Positives = 216/485 (44%), Gaps = 43/485 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F + + + + I++ L Y+Q +E N Q+N I + A A A +D+ Sbjct: 141 DIAFASTVQLSHWIHERKITSERLTKIYLQRLEKYNKQLNCVITLTADHALDQARRADEE 200 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G R L GIP G KD T GI T + P ++TVTQ+L D GAV++ K Sbjct: 201 LAAGHDRGPLHGIPWGAKDLLDTAGIPTTWGAEPYRDRIPAKDATVTQRLNDAGAVLVAK 260 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L++ A+ N+ + G +PW + GSS G +AVA L +IG++T Sbjct: 261 LSLGALAL---NDVWFGGQTKNPWLLEEGAS-----GSSAGPGSAVAAGLVGFAIGSETQ 312 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+ G G++PTYGR R G ++ + + D+ G +TR V D+ ++L AI+G D Sbjct: 313 GSIVSPSMRCGVTGLRPTYGRVPRTGAMTLSWTCDKLGAMTRGVVDTMLVLNAISGPDGQ 372 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D CV A +S+ G+ VG + + + +D+ + +K G VE Sbjct: 373 DDACVP---SKLNFAAGKSVAGLRVGYFPAWMKEAPATAVDRA---ALETIKKLGMVPVE 426 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP Y D + L E E + + E+K Sbjct: 427 VSLPDWPY--------------------DSLNIILFAESAAAFEELTLSHKV---DELKM 463 Query: 362 RI---MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ T+ S +++A ++R + + + VDV+L P+ A + Sbjct: 464 QVPDAWPNTFRQSRFLSAVDFVQADRLRRKVALEMARVMSE-VDVLLVPSLRDEALVITN 522 Query: 419 EENN-SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + S ++ + +V + A P +P +++P G+ LIG+ F E TL G Sbjct: 523 FTGHPSLTLRAGFVEVTEARSDWAPDPKHPLPKFATPRRVPYGVTLIGRLFEEGTLAQAG 582 Query: 478 QIIEK 482 +E+ Sbjct: 583 MAMEQ 587 >gi|37526114|ref|NP_929458.1| hypothetical protein plu2200 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785544|emb|CAE14493.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 447 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 135/490 (27%), Positives = 224/490 (45%), Gaps = 58/490 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E+ ++++E +R+RS IS VE++ Y++ I + ++NA+ E+ ARAAA+ ++ Sbjct: 1 MDEIISLSINELGERIRSGVISPVEILGEYMKRILCYDHKLNAFSEIYEADARAAAKHAE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I +G+ R L GIP +KD F KG T ++ + + + V L G ++ Sbjct: 61 QEIRSGNWRGPLHGIPFAVKDFFDLKGKVTGGGTNCFSQ-KAYVTAPVVATLLKQGMILT 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK E MG++ ++PW + + PGGSS GS+ AVA L ++ TD Sbjct: 120 GKHRAVELGMGATGIMENSPTPLNPW---GQSQRVAPGGSSNGSAVAVAAGLTPIALVTD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL---LKAIA 236 TGGS R PA++ G G +P+ G S G++ + ++D GII + D I+ L Sbjct: 177 TGGSARIPAAWCGVSGFRPSMGNLSSSGMLPLSQTMDTVGIIAKHASDIFIVYNQLNPNL 236 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 Y C +P E LD KE L Y+S ++ Q G+ K Sbjct: 237 AYHSCINNLNIGILPSEEYILD-----------KETGLHYVS-LLEVFSQMGMVTQKKP- 283 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 P +Q + A II+ EA N YG ++ L R + G Sbjct: 284 -----FPYPLSQ-CMKANSIITAFEAWQN--------YGYLCNSQNSLSDTIKVR-LERG 328 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +E+K + Y + R +R + F Q VD ++ PTTP ++P+ Sbjct: 329 KEIKEKE-----------YSEALIFCRHVRKIFSNWF-----QNVDALVIPTTPEPSWPI 372 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 +++ H + FT VN A L A+S+P L + +P LQ++ +E+ ++ Sbjct: 373 AEKDE------HQPPNDFTRFVNFADLCAVSIPTGLNSQGLPFSLQIVCNRKKEKNALAL 426 Query: 477 GQIIEKEAGY 486 ++IE G+ Sbjct: 427 AELIECRIGF 436 >gi|27375309|ref|NP_766838.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27348445|dbj|BAC45463.1| amidase [Bradyrhizobium japonicum USDA 110] Length = 504 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 122/448 (27%), Positives = 213/448 (47%), Gaps = 31/448 (6%) Query: 53 RAAAEESD------KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 R +AEE+ K + G A L+G + +KD G+ S L+G+ P +++ Sbjct: 63 RPSAEENPRNAWYRKATVKGAAGGKLKGKTVALKDNIMLAGVPMTNGSSTLEGYVPDFDA 122 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 T+ ++ D GA + GK++ + F + + T +GPV +P + S + G + Sbjct: 123 TIVTRMLDAGAEIKGKVHCEHFCLSGGSHTGSFGPVHNPHKMGYSAGGSSSGSGVVVALG 182 Query: 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV 225 V +IG D GGSIR P+SF G G+KPT+G GI+ +D G +T TV Sbjct: 183 EVD-----MAIGGDQGGSIRMPSSFCGIYGMKPTWGLVPYTGIMPIEIYVDHTGPMTATV 237 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKT 284 D+A+LL+ +AG D D V +Y +AL Q ++GM +GI KE + ++++ Sbjct: 238 ADNALLLEVLAGDDGYDPRIKAPKVEEYTKALGQGVKGMKIGILKEGFEQPVAEAAVNES 297 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGK 341 ++ KD GA + +S+P + I + + DG YGL + Sbjct: 298 VREAAKRFKDLGATVETVSIPMHLLGGAIWTPIGTEGLTQTMMFGDG--YGLSRGDLYST 355 Query: 342 DILEMYENTR--SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++ + R + + K +M+GTY+ ++ Y +A I + + +AF Sbjct: 356 SLMDFHRGWRRQADSLSETTKLFMMLGTYI-NNNFGPRFYGKALNISRRLTAAYDKAFGD 414 Query: 400 GVDVILTPTTPTSAFPL-----GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 D++L PTTP A L +E+ + ++ I N T ++ PA+S+P + + Sbjct: 415 -YDLLLLPTTPMKATKLPEPTASREDYVARALEMIGN---TAPFDITHHPAMSLPCGMVD 470 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEK 482 +P+GL L+G+ F E T++ E+ Sbjct: 471 -GLPVGLMLVGRMFEESTIYRAAHAFEQ 497 >gi|254562548|ref|YP_003069643.1| amidase-like protein [Methylobacterium extorquens DM4] gi|254269826|emb|CAX25804.1| amidase-related enzyme [Methylobacterium extorquens DM4] Length = 485 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 143/505 (28%), Positives = 227/505 (44%), Gaps = 59/505 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L+FM E R + ++ IS VEL + + E S + +NA+ ++ ++AR+AA +++ Sbjct: 19 SDLDFMTALELRRLIAARAISPVELTEHALTHAEASQASLNAFCHLMPEEARSAARRAEE 78 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+P+ +KD A G + S + ++ ++L GA+++G Sbjct: 79 AVMCGSPLGLLHGLPVSVKDLIAVGGQPYASGSRAMASNVAAADAPAVERLRAAGAIIIG 138 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ G PW TPGGSS G++A+VA + ++GTD Sbjct: 139 KTTTSEFGAKPVGDSPLTGITRHPWDLAK-----TPGGSSAGAAASVAAGITPFALGTDG 193 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ TG VG+K +GR + S P+L G + R V D+A+L A+AG+D Sbjct: 194 GGSLRIPAALTGLVGLKAQFGRVP-VWPTSATPTLAHVGALARNVADAALLTTAVAGHDP 252 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVPD A S+ G+ V +P + + L D GA + Sbjct: 253 RDPFAVAGPVPDLLGAAKASVAGLRVAWSATLGYARPNPEVAAIARAAAMALADQGAIVE 312 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-----KDILE-MYENTRSIG 354 E+ + PA A Y G+ G R+ G +D+L+ + Sbjct: 313 EVE---------TVFESDPA-ALWTAEFYAGI--GTRLRGVLESRRDLLDPAVADVLDAA 360 Query: 355 FGQEVK--HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 QE++ + + Y L RD +F G DV+++PT P S Sbjct: 361 LAQEMRAYYETVFARYAL--------------------RDRMVSFFTGYDVLVSPTLPIS 400 Query: 413 AFPLGKE-----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 + +G+ E+ S Y F N+ G PA SV A + MP+GLQ++G+ Sbjct: 401 SLEVGRNIPEGLEDRSLVSWAFYTYPF----NLTGQPAASVCAGIASDGMPVGLQIVGRT 456 Query: 468 FREETLFSVGQIIE--KEAGY-FRP 489 E + IE K GY RP Sbjct: 457 LGEFDVVRTAAAIERTKPPGYNLRP 481 >gi|218903219|ref|YP_002451053.1| amidase family protein [Bacillus cereus AH820] gi|218536326|gb|ACK88724.1| amidase family protein [Bacillus cereus AH820] Length = 491 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 149/506 (29%), Positives = 227/506 (44%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV+LGK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGD--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + PDY + LD + G +G+ PKEY Y + D K +++ Sbjct: 251 VDEKDVATHKSEGIGEPDYTKYLDVNGLNGTKIGVYNNAPKEY---YETGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLHSKGATVVEDIHIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQATNH 484 >gi|206577241|ref|YP_002238501.1| amidase [Klebsiella pneumoniae 342] gi|288935489|ref|YP_003439548.1| amidase [Klebsiella variicola At-22] gi|206566299|gb|ACI08075.1| amidase [Klebsiella pneumoniae 342] gi|288890198|gb|ADC58516.1| Amidase [Klebsiella variicola At-22] Length = 504 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 123/422 (29%), Positives = 209/422 (49%), Gaps = 24/422 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ + L+GF P Y++TV +L D GA +LGK + F + Sbjct: 88 LAGRTVVLKDNIALAGVPMMNGASTLEGFVPLYDATVATRLLDAGATILGKATCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS PV +P R ++ GGSS GS+A VA ++G D GGS R PA++ Sbjct: 148 GGSHTSDPAPVHNPLRR-----GYSAGGSSSGSAALVASGEVDLAMGGDQGGSARIPAAW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G GI+ + D G +TR+V+D+A++L+ IAG D D V Sbjct: 203 CGLYGLKPTHGLVPYTGIMPIEATFDHTGPMTRSVKDNALVLEVIAGADGLDPRQYAPKV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL + ++G+ +GI E ++L L + + + ++ L++ GA + EIS+P Sbjct: 263 EAYTEALGKGVRGLKIGIMAEGFQLPNLDARVAEKVRAAVARLQELGATVGEISVPEHSL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGK---DILEMYENTR--SIGFGQEVKHRIM 364 A + I ++ + +G+ G +G+ +L+ + R + +K + Sbjct: 323 AGALWSPIGCEGLTAQMMHGNGM--GFNWKGQYDVALLDKHAQWRDNADALSPSLKICMF 380 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G Y L R + +Y +A+ I + + A D+++ PT P A PL + + Sbjct: 381 VGQYGL-ERYHGRYYAKAQNIARRARAGYDRALAD-FDLLVMPTVPLVAQPLPEPDC--- 435 Query: 425 SMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S+ + F + N A G PA+++P L + +P+G+ L+G+ F E TL+ Sbjct: 436 SITEYISRAFEMIGNTAPQDITGHPAMTLPCGLVD-GLPVGMMLVGRHFAESTLYQAAAA 494 Query: 480 IE 481 E Sbjct: 495 FE 496 >gi|290509528|ref|ZP_06548899.1| amidase [Klebsiella sp. 1_1_55] gi|289778922|gb|EFD86919.1| amidase [Klebsiella sp. 1_1_55] Length = 504 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 123/422 (29%), Positives = 209/422 (49%), Gaps = 24/422 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ + L+GF P Y++TV +L D GA +LGK + F + Sbjct: 88 LAGRTVVLKDNIALAGVPMMNGASTLEGFVPLYDATVATRLLDAGATILGKATCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS PV +P R ++ GGSS GS+A VA ++G D GGS R PA++ Sbjct: 148 GGSHTSDPAPVHNPLRR-----GYSAGGSSSGSAALVASGEVDLAMGGDQGGSARIPAAW 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G GI+ + D G +TR+V+D+A++L+ IAG D D V Sbjct: 203 CGLYGLKPTHGLVPYTGIMPIEATFDHTGPMTRSVKDNALVLEVIAGADGLDPRQYAPKV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL + ++G+ +GI E ++L L + + + ++ L++ GA + EIS+P Sbjct: 263 EAYTEALGKGVRGLKIGIMAEGFQLPNLDARVAEKVRAAVARLQELGATVGEISVPEHSL 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGK---DILEMYENTR--SIGFGQEVKHRIM 364 A + I ++ + +G+ G +G+ +L+ + R + +K + Sbjct: 323 AGALWSPIGCEGLTAQMMHGNGM--GFNWKGQYDVALLDKHAQWRDNADALSPSLKICMF 380 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +G Y L R + +Y +A+ I + + A D+++ PT P A PL + + Sbjct: 381 VGQYGL-ERYHGRYYAKAQNIARRARAGYDRALAD-FDLLVMPTVPLVAQPLPEPDC--- 435 Query: 425 SMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S+ + F + N A G PA+++P L + +P+G+ L+G+ F E TL+ Sbjct: 436 SITEYISRAFEMIGNTAPQDITGHPAMTLPCGLVD-GLPVGMMLVGRHFAESTLYQAAAA 494 Query: 480 IE 481 E Sbjct: 495 FE 496 >gi|196036685|ref|ZP_03104078.1| amidase family protein [Bacillus cereus W] gi|195990754|gb|EDX54729.1| amidase family protein [Bacillus cereus W] Length = 491 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 148/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHLSSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQATNH 484 >gi|228945708|ref|ZP_04108055.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813929|gb|EEM60203.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 493 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 148/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHLSSEDAFLVTKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 253 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + YL AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYLNAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 416 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 461 ITLASTAFSEGTLIKLAYAFEQATNH 486 >gi|322434250|ref|YP_004216462.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321161977|gb|ADW67682.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 505 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 143/502 (28%), Positives = 234/502 (46%), Gaps = 40/502 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +++++ L S + +L +Y+ I + + +N + + Q A A A+ DK Sbjct: 21 QLEETTIAKTQAALTSHKTTCRQLTQAYLTRIAHYDPTLNTVVTLNPQ-ALADADALDKE 79 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R L+GI + +KD + TK + T S + GF P ++ + KL GA+++ K Sbjct: 80 FAQTHKLRPLQGIVVMVKDNYDTKDLQTTGGSLAMKGFIPTEDAFMVAKLRAAGAIIIAK 139 Query: 122 LNMDEFAMGSS-NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 NM E+A E+S G +P+ D T P GSSGG+ A+VA L +GTDT Sbjct: 140 SNMAEWAFSPYLTESSIAGITRNPY---DPTR--VPAGSSGGTGASVAANLAEVGLGTDT 194 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 G SIR PAS VGI+PT G SR GII + + D G + RTV D+A +L A+ GYD Sbjct: 195 GNSIRGPASHNDLVGIRPTIGLTSRAGIIPLSFTNDVGGPLARTVADAAAVLAAVQGYDP 254 Query: 241 CDATCV----NLPVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKD 294 D P DY +LD + ++G +G+ ++Y P I ++ I+ LK Sbjct: 255 ADPITKLSEGKAPK-DYTASLDPKGLKGARIGVVRKYIETPTTDPEIKALTEKAIADLKS 313 Query: 295 AGAKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRY---GLRVEGKDILEMYENT 350 GA+I++ +LP P + + YD +Y K + E+ ++ Sbjct: 314 QGAEIIDNFTLPDLDRG--------PQKPTCGGFEYDLNQYLAAHPNAPCKTLAEIIDSG 365 Query: 351 RSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPT 408 +G +KH + ++ C D+ Y RKI + T++ + Q +D ++ PT Sbjct: 366 LYLGSIADRLKHAALPAAEATTAHCPDT-YHDPRKIA--FRDAITQSMDAQHLDALIYPT 422 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQP 467 +G ++ +G I + M G PAI+VP + +P GL +G+ Sbjct: 423 WSNPPRKVGDLKSPAGDNSQIISP-------MTGFPAITVPMGFTVNQTLPAGLTFVGRS 475 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 F E L + E+ + +P Sbjct: 476 FSEPELIKLAYAYEQATHHRQP 497 >gi|66392697|emb|CAG29804.1| amidase [Rhodococcus erythropolis] Length = 515 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/430 (29%), Positives = 206/430 (47%), Gaps = 26/430 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD G+ S ++GF P ++TV +L GA + GK ++ Sbjct: 88 LTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T GPV +PW SSGGS+A VA +IG D GGSIR PA+F Sbjct: 148 GSSFTPASGPVRNPWDRQREAGG-----SSGGSAALVANGDVDFAIGGDQGGSIRIPAAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-LP 249 G VG KPT+G G ++D G ITRTV D+A++L IAG D D + + Sbjct: 203 CGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQADSVE 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY D + G+ +GI +E +S P +D + L + G + E+++P Sbjct: 263 AGDYLSTPDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHL 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKHR 362 +A + +I+ + + +G YG+ EG +++ + + R + + V+ Sbjct: 323 HAFHIWNVIATDGGAYQMLDSNG--YGMNAEGLYDPELMAHFASRRIQHADALSETVELV 380 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + G + +++ S Y +AR + L + + A Q DV++ PT P A L ++ + Sbjct: 381 ALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPAKDVD 438 Query: 423 -----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ VG Sbjct: 439 RATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGRHFDDATVLRVG 494 Query: 478 QIIEKEAGYF 487 + EK G F Sbjct: 495 RAFEKLRGAF 504 >gi|221196100|ref|ZP_03569147.1| amidase family protein [Burkholderia multivorans CGD2M] gi|221202773|ref|ZP_03575792.1| amidase family protein [Burkholderia multivorans CGD2] gi|221176707|gb|EEE09135.1| amidase family protein [Burkholderia multivorans CGD2] gi|221182654|gb|EEE15054.1| amidase family protein [Burkholderia multivorans CGD2M] Length = 494 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 135/495 (27%), Positives = 216/495 (43%), Gaps = 48/495 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA----AEESDKR 62 ++ E +RSK +S VE + +Y+ IE N +NA +VA + R A A + D Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNA---IVALRDRDALLGEAADKDAA 78 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L G+P KD TKG+ T S I P +S ++ GA+ +GK Sbjct: 79 LARGEYHGWLHGMPQAPKDLAMTKGLVTTYGSRIFSDHVPQADSVGVARMRAAGAIFIGK 138 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG +P+ S GGSSGG++AA+A + + G+D G Sbjct: 139 TNTPEFGLGSHTFNDVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFG 193 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA+F G +P+ GR R G+ + L G + RTV D A LL AGYD Sbjct: 194 GSLRNPAAFCNIYGFRPSQGRVPRWPGVDVYMQQLGIEGPMGRTVGDVAQLLAIQAGYDP 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAK 298 D + + + L+ ++G + ++ YL+ P + +QG++ L+D G Sbjct: 254 NDPLSLADDPAVFAQPLEADVKGTRIAWVGDWN-GYLATEPGVLAQCEQGLATLRDIGCD 312 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQ 357 + ALPA+ A + R L + G +L Y + R Sbjct: 313 V--------DAALPAF-------APERIWRLWLAHRHL-LSGGGLLAHYRDPARRALLKP 356 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 E + + + + +D+ R + +++ F D I PT FP Sbjct: 357 EAIYEVEGLLAMQGAAVFDASVERTAWHQAVLR------FFDRYDFIAAPT--AQVFPFD 408 Query: 418 KEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E+ + D + V +AG P ISVP E +P+G+QLIG+P + Sbjct: 409 VEQRWPNEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNEAGLPMGMQLIGRPRADL 468 Query: 472 TLFSVGQIIEKEAGY 486 + + + E+ A + Sbjct: 469 AVLQLARGYERAADW 483 >gi|302544149|ref|ZP_07296491.1| amidase [Streptomyces hygroscopicus ATCC 53653] gi|302461767|gb|EFL24860.1| amidase [Streptomyces himastatinicus ATCC 53653] Length = 476 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 141/494 (28%), Positives = 228/494 (46%), Gaps = 39/494 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + E LR +++SA E+V ++++ IE N ++NA + +VA +A AA +D+R Sbjct: 7 ELCYKTARELSALLRGREVSAREVVRAHLERIERVNPEVNAIVTLVADRALDAAAAADER 66 Query: 63 IINGDARD---LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I+ A L G+PI KD T GI T S ++DG P + + +++ D GA+ L Sbjct: 67 IVAAGADGVGVLHGLPIAHKDTHNTAGIRTSHGSPLVDGI-PDQDDLIIERIRDAGAITL 125 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ EFA GS +G +P+ + D+ G S G ++A +G + A G+D Sbjct: 126 GKTNVPEFAAGSHTFNPIFGATHNPY----APDRSAGGSSGGAAAALASGMVPIAD-GSD 180 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PASF VG++P+ GR + +L G + RTV D+A+LL A+AG D Sbjct: 181 TGGSLRNPASFNNVVGLRPSPGRVPTWPASNAWTTLSVKGPMARTVADTALLLSAMAGPD 240 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + P + R LD+ + G+ V P L + P + + +D G Sbjct: 241 PRSPIALEEPGARFARPLDRDLTGLRVAWSPDLGGLVPVEPEVAAVVEASAGVFEDLGC- 299 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VE + P + + A ++ V +G +++ + G Q Sbjct: 300 VVERACPDLSEGEEVFR-------TQRAALFE-VAFG------PLMDRHPE----GLKQT 341 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ G R RA + T + FE+ DV+L P + F +G Sbjct: 342 IRENAEAG-----RRLTGPEVARAEVLHTALFHRVRAFFER-YDVLLLPVSQVPPFDIGI 395 Query: 419 E---ENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E E +MG + + V G PA+SVPA +P+GLQ++G + + Sbjct: 396 EYPTEVAGVAMGDYLEWMRSAYLVTSTGSPALSVPAGFTPAGLPVGLQIVGPHRADFAVL 455 Query: 475 SVGQIIEKEAGYFR 488 +G E+ GY R Sbjct: 456 QIGHAFEQATGYGR 469 >gi|171317584|ref|ZP_02906772.1| Amidase [Burkholderia ambifaria MEX-5] gi|171097278|gb|EDT42125.1| Amidase [Burkholderia ambifaria MEX-5] Length = 494 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 221/492 (44%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A E D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNALVSLRDRATLLAEAAEKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L G+P KD TKG+ T S IL P +S ++ GA+ +GK N Sbjct: 82 GEYHGWLHGMPQAPKDLAMTKGLRTTYGSPILRDNVPQADSVGVGRMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS +G +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVHGATRNPYDLTKSA-----GGSSGGTAAALAARMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G++P+ GR R + F L G + RTV D A LL AGYD+ D Sbjct: 197 RNPAAFCNVYGLRPSQGRVPRWPAVDVFMQQLGIEGPMGRTVGDVAHLLSIQAGYDQNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + ++LD+ ++G + ++ YL+ P + ++G++ L++ G + Sbjct: 257 LSLAEDPAVFTKSLDRDLRGERIAWVGDWN-GYLATEPGVLAQCEKGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APDRIWRLWLTHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + ++ +D+ R + ++ +F D I PT FP ++ Sbjct: 360 YEVEGLLAMQAAEVFDASIERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVDQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ D + V +AG PAISVP + +P+G+QLIG+P + + Sbjct: 412 RWPKAIAGRAMDTYHRWMETVVPWTLAGCPAISVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYEQAADW 483 >gi|167617145|ref|ZP_02385776.1| indole acetimide hydrolase [Burkholderia thailandensis Bt4] gi|257141031|ref|ZP_05589293.1| indole acetimide hydrolase [Burkholderia thailandensis E264] Length = 447 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 130/457 (28%), Positives = 217/457 (47%), Gaps = 43/457 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A + + AR AA D +I +G L G+P IKD T + T+ S L GF Sbjct: 25 LAAMTHIAPEIARQAAANVDAQIASGRRLPLAGVPFVIKDNLFTSDMPTRGASPALLGFG 84 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ ++G V +P GGSS Sbjct: 85 ATCNATAVQQLLDAGAVPLGKANMHELAFGITSANGHFGAVRNPHDPARIA-----GGSS 139 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG+++AVA + +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 140 GGTASAVAAGI-PFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTHGVLALSPTRDTVGT 198 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I ++ D +L + G DAT P P ++ G+ +G+P D L P Sbjct: 199 IAHSIDDLLLLDAVLTG----DAT---EPAP-------VALAGLRIGVPDAPYFDGLDPA 244 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L +AGA+++ ++ A + EA +A ++ + Y R Sbjct: 245 VAEMTERALAALTNAGARLIPLA---------ARALHEADEACGFPIAGFEALAYWQRFS 295 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + T + + D++ +R+++ R + +AF Sbjct: 296 AERLDLPFAEFVARLG-SDDVRH--IFRTLIDAPPSSDAYAAAIDVLRSIV-RWYDQAFH 351 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV-----AVNMAGLPAISVPAAL 452 + GVD I PT A PL + Y V + G+P++SVPA L Sbjct: 352 RTGVDCIALPTVQCEA-PLVAASGHDLPPDAAYALFARVIRQTGPATLGGVPSVSVPAGL 410 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + +P+GL L G + L ++ + +E+ + R Sbjct: 411 SKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAHAR 447 >gi|300310266|ref|YP_003774358.1| amidase family protein [Herbaspirillum seropedicae SmR1] gi|300073051|gb|ADJ62450.1| amidase family protein [Herbaspirillum seropedicae SmR1] Length = 504 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 123/431 (28%), Positives = 204/431 (47%), Gaps = 21/431 (4%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K + G A L G + +KD A G+ S L+GF P Y++T+ +L D GA +L Sbjct: 77 KSTVKGAAEGKLAGRTVVLKDNVALAGVPMMNGSSTLEGFVPSYDATIVTRLLDAGATIL 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + F + + TS PV +P R + SS GS+A VA +IG D Sbjct: 137 GKATCEHFCLSGGSHTSDPAPVHNPRRHGYGSGG-----SSSGSAALVAAGEADMAIGGD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P++F GT G+K T+G G++ ++D G IT VRD+A++L+ IAG D Sbjct: 192 QGGSIRIPSAFCGTYGMKATHGLVPYTGVMPIEATVDHVGPITANVRDNALMLEVIAGAD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAK 298 D V Y ALD+ ++G+ +GI E + L + + Q+ I+ L+ GA Sbjct: 252 GLDPRQYAPEVQPYTAALDRGVRGLKIGILTEGFALGNMDKRVADKVQEAIAQLEKLGAS 311 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIG--F 355 + +S+ A + I + + +G+ + + + +L+ + + R Sbjct: 312 VATVSVEEHALAGALWQPIGCEGLTMQMMHGNGMGFNWKGLYDLGLLQHHAHWREHADDL 371 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +K + +G Y L +R Y +A+ I + + +A D+++ PT P A P Sbjct: 372 SATLKLCMFVGQYGL-TRYQGRFYAKAQNIARRARAGYDKALAD-FDLLVMPTVPIIAQP 429 Query: 416 LGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 L E + + I N T +++ G PA+S+P + +P+GL L+G+ + E Sbjct: 430 LPAAGCPLAEYVARAFEMIGN---TAPLDITGHPAMSIPCGTVD-GLPVGLMLVGKHYAE 485 Query: 471 ETLFSVGQIIE 481 TL+ E Sbjct: 486 ATLYQAAAAFE 496 >gi|227113611|ref|ZP_03827267.1| amidase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 472 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 137/488 (28%), Positives = 226/488 (46%), Gaps = 51/488 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +++ + + L++ SA EL + IE +N +NAY V +++ A AE D G Sbjct: 12 LSIRQIQQGLQAGTFSAKELAQQALGTIEQANPTINAYTHVTSERMLAEAERIDACRQRG 71 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNM 124 + L G+P +K+ F G T A + + P + ++L GA++ G LNM Sbjct: 72 ETLPALAGVPYAVKNLFDVSGETTLAGAELFSQRPPAAQDAFAIRQLASQGALLSGMLNM 131 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D +A G + E S+YGP +P +D+ + GGSSGGS+AAVA L ++G+DT GSI Sbjct: 132 DAYAYGFTTENSHYGPTRNP---LDT--QRIAGGSSGGSAAAVAAGLVNFTLGSDTNGSI 186 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P+S G G+KPT+GR SR G F SLD G + R+ D A++ A+ G DE D Sbjct: 187 RVPSSLCGIFGLKPTFGRLSRHGSHPFVASLDHIGPLARSADDLALVFDALQGRDEHDRF 246 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 L+ G+ + LD Y S + + + A ++ Sbjct: 247 QAKRETQHSAAQLEAGSGGLRYAV-----LDGYFSTWASEEANAAVRQIAQALGAQDSLT 301 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 L A A +I+S +E + D+ E F + R+ Sbjct: 302 LTDAALARSAAFILSASEGGNQYL-------------PDLRSQPER-----FEPLSRERL 343 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE--- 420 + G + + + Y++A++ R ++ FE D+++ P TP SA +G+E Sbjct: 344 LAGAMIPA-----AWYVQAQRFRHYFRQQTLALFEH-TDLLIAPATPCSATLIGQETMRI 397 Query: 421 NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 N++ SMG + T ++ GLP ++VP A +P+G+Q+I P+RE+ Sbjct: 398 NDTDLPVRASMG-----MLTQPISFVGLPVVTVPVA-TNSGLPIGVQIIAAPWREDLCLR 451 Query: 476 VGQIIEKE 483 +E++ Sbjct: 452 TAWALEQQ 459 >gi|167998636|ref|XP_001752024.1| predicted protein [Physcomitrella patens subsp. patens] gi|162697122|gb|EDQ83459.1| predicted protein [Physcomitrella patens subsp. patens] Length = 601 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 138/513 (26%), Positives = 234/513 (45%), Gaps = 65/513 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEES 59 + + + + D S ++ E+ ++ +IE+S +N +I + + A + Sbjct: 105 KFQYATIRDYADAYTSGRVTPTEVAKRFLTSIEDSRKMSRGLNLFISLDFHDVISQAAAA 164 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAV 117 +R G L+G+ + +KD T S L R ++ V ++L + GAV Sbjct: 165 TERYRQGTPLSVLDGVLVAVKDEIDCLPYPTTGGSTWLGKARQVTKDAAVVKRLRECGAV 224 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 M+GK NM E +G++ +YG +P D T GGSSGGS+ VA LC ++G Sbjct: 225 MVGKTNMHELGVGTTGINPHYGATRNP---HDMTR--VSGGSSGGSATVVAAGLCPVALG 279 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 D GGS+R PAS +G VG+KPT+GR ++ G++ ++ G +T TV D+ I + + Sbjct: 280 VDGGGSVRMPASLSGVVGLKPTFGRIAKSGLLPLNWTIGMVGTLTGTVEDAYIFVSLLIE 339 Query: 238 YDE----------------C-DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSP 279 E C ++C LP+ + + ++ +I + K + + + Sbjct: 340 VLERNRMKLKYFLLFMVVYCPKSSCSTLPLLN-DVQMEPNIMAKLIEEIKLAKFSKWYND 398 Query: 280 TIDKTWQ---QGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY- 334 + D W+ + ++D G K+V+ S+P A+YI E +++L GV Y Sbjct: 399 SDDSVWRVCDSALRLIQDTYGCKVVDASIPDLDKMRLAHYITMGGELTASL----GVEYE 454 Query: 335 --GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 G + G D+ +I Q +R + L SRC H Sbjct: 455 NLGRKTTGGDV------RSTISIFQGFSNREFVTAQRLRSRCMQHH-------------- 494 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVP 449 E F++ D I+TPTT +A P+ + G + + + F +A N+ GLPAI++P Sbjct: 495 -MEVFKEA-DFIVTPTTACTAPPIRDDAEQYGELDYQHGGKLMRFIIAGNLLGLPAITLP 552 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 K +P+GLQL+G+P+ E L V EK Sbjct: 553 VGYDAKGLPVGLQLVGKPWSEAALLRVAVAFEK 585 >gi|83717410|ref|YP_440392.1| indole acetimide hydrolase [Burkholderia thailandensis E264] gi|83651235|gb|ABC35299.1| indole-3-acetamide hydrolase-related protein [Burkholderia thailandensis E264] Length = 467 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 130/457 (28%), Positives = 217/457 (47%), Gaps = 43/457 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A + + AR AA D +I +G L G+P IKD T + T+ S L GF Sbjct: 45 LAAMTHIAPEIARQAAANVDAQIASGRRLPLAGVPFVIKDNLFTSDMPTRGASPALLGFG 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ ++G V +P GGSS Sbjct: 105 ATCNATAVQQLLDAGAVPLGKANMHELAFGITSANGHFGAVRNPHDPARIA-----GGSS 159 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG+++AVA + +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 160 GGTASAVAAGI-PFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTHGVLALSPTRDTVGT 218 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I ++ D +L + G DAT P P ++ G+ +G+P D L P Sbjct: 219 IAHSIDDLLLLDAVLTG----DAT---EPAP-------VALAGLRIGVPDAPYFDGLDPA 264 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L +AGA+++ ++ A + EA +A ++ + Y R Sbjct: 265 VAEMTERALAALTNAGARLIPLA---------ARALHEADEACGFPIAGFEALAYWQRFS 315 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + T + + D++ +R+++ R + +AF Sbjct: 316 AERLDLPFAEFVARLG-SDDVRH--IFRTLIDAPPSSDAYAAAIDVLRSIV-RWYDQAFH 371 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV-----AVNMAGLPAISVPAAL 452 + GVD I PT A PL + Y V + G+P++SVPA L Sbjct: 372 RTGVDCIALPTVQCEA-PLVAASGHDLPPDAAYALFARVIRQTGPATLGGVPSVSVPAGL 430 Query: 453 CEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + +P+GL L G + L ++ + +E+ + R Sbjct: 431 SKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAHAR 467 >gi|222475835|ref|YP_002564356.1| Amidase [Halorubrum lacusprofundi ATCC 49239] gi|222454206|gb|ACM58470.1| Amidase [Halorubrum lacusprofundi ATCC 49239] Length = 495 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 137/476 (28%), Positives = 231/476 (48%), Gaps = 28/476 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R + S V +VD+++ IE N ++NAY+ V ++ AR AA E+++ + G D L G+ Sbjct: 22 IRRGERSPVAVVDAFLDRIERVNPEINAYVTVCSESAREAAREAERAVERGDDIGPLHGV 81 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD G+ T S P ++ V +L + GA++LGK N EF + + Sbjct: 82 PVAIKDLNRVAGVRTTFGSPAFADHVPEHDDVVVSRLREAGAIILGKTNTPEFGRKTKTD 141 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW +T SSGGS+AAVA L ++G+D GSIR P+S G Sbjct: 142 NPVFGASGNPWDPSRTTGG-----SSGGSAAAVAAGLAPIALGSDAAGSIRIPSSACGVF 196 Query: 195 GIKPTYGRCSRLGIIS--FAPSLDQA--GIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G P +GR + S F L G I RTV D+A++++AI+G D D + P Sbjct: 197 GFLPDFGRVPAGPVRSDAFQDLLPYTFLGPIARTVSDAALMIEAISGPDTADPNGLPTPT 256 Query: 251 PDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y A++ + + + +G ++ +S ++ +T + + L AGA + E+ +P Sbjct: 257 GSYRDAVESAPDLADLRIGYSPDFGDFVVSKSVSETVESALDDLSAAGATVEEVEIPFEG 316 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 + I S + Y+ ++ V D+L + E EV+ RI G Sbjct: 317 SWEERHDAIEWILQSRYVGLYENLKQDSDV---DLLTIDEP-----ITPEVRSRIRAGLE 368 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN--NSGSM 426 + ++ AR+ RT + TEA E VDV++TPT +AF L + + S+ Sbjct: 369 LDTTTLA-----TARRRRTAVYDAITEALED-VDVLVTPTLGRTAFGLDVDNPTVDGESV 422 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ T +N++G PA S+P + +P+G+Q++G + + S IE+ Sbjct: 423 HRMHGWTLTWPLNLSGHPAASIPVGFDDSGLPIGMQVVGGRLEDRKVMSASAAIEE 478 >gi|114763541|ref|ZP_01442946.1| amidase [Pelagibaca bermudensis HTCC2601] gi|114543821|gb|EAU46833.1| amidase [Roseovarius sp. HTCC2601] Length = 504 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 132/431 (30%), Positives = 209/431 (48%), Gaps = 32/431 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD G+ S L+G+ P+ ++T+ ++ D GA +LGK + + F M Sbjct: 88 LKGKTVALKDNVMLAGVQMMNGSSTLEGYVPNVDATIVTRMLDAGATILGKAHCECFCMS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +P D T GSS GS+A VA +IG D GGSIR P++F Sbjct: 148 GGSHTSALGPVCNP---NDPTKSAG--GSSSGSAALVAKGEVDLAIGGDQGGSIRMPSAF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 GTVG+KPT+G GI+ ++D AG IT +V D+A++L+ +AG D D+ +++ V Sbjct: 203 CGTVGMKPTHGLVPYTGIVPIEITIDHAGPITSSVADNALMLEVLAGPDGYDSRQIDVSV 262 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY AL + ++GM V + KE S T +D+ + L++ G + E+S+P Sbjct: 263 SDYTEALGKPVKGMKVALLKEGFGHPQSETEVDEKVRAAAKKLEELGVIVEEVSIPMHLD 322 Query: 310 ALPAYYIISPAEASSNLARYDGV---RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 L + I + + DG R L V ++ + R E+ + +G Sbjct: 323 GLDIWTPIGLQGLTQTMMLGDGYGTSRPDLYV--TSFMDFHRGWRE--RADELSETLKLG 378 Query: 367 TYVLSSRCYDSHYLRA--RKIRTLIK--RDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 +L ++ D Y + K ++K R +A D IL PT P A P+ Sbjct: 379 --MLFAQFADDQYGKRFYGKAFNIVKTLRAAYDAVLADYDAILMPTVPIIATPI---PGP 433 Query: 423 SGSMGHIYNDVFTVAVNMAGL-----PAISVPAALCEK--KMPLGLQLIGQPFREETLFS 475 S I F + N A PA+SVP C K +P+G+ L+G+ + E TL++ Sbjct: 434 DASREEIVQRAFEMLPNTAPFDITHHPALSVP---CGKVGDLPVGMMLVGKMWDEATLYT 490 Query: 476 VGQIIEKEAGY 486 +G EK + Sbjct: 491 LGDAFEKSGDW 501 >gi|195973402|gb|ACG63345.1| putative oxalurate amidohydrolase [Klebsiella oxytoca M5al] Length = 465 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 142/496 (28%), Positives = 224/496 (45%), Gaps = 61/496 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK- 61 +L M + + + L S ++SA E+ ++ I N Q+NA+ + ++ A AE D Sbjct: 2 KLPEMTIHDIQRALASGELSAKEIARHTLENIARVNPQINAWTHISEKRMLAEAENIDTL 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH--YESTVTQKLWDNGAVML 119 R L G+P +K+ F G T A + +L G RP +S ++L GA++ Sbjct: 62 RREKKPLPALAGVPYAVKNLFDVAGHTTLAGAQLL-GDRPAAVADSWAVRQLLSAGALLS 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G LNMD +A G + E S+YG +P + + GGS+ +A + F S+G+D Sbjct: 121 GMLNMDAYAYGFTTENSHYGATRNP-HDLSRIAGGSSGGSAAAVAAGLVHF----SLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PAS G G+KPT+GR SR G F SLD G R V D + + A+ G D Sbjct: 176 TNGSIRVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARCVSDLSAVYDALQGRD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + L + ++G+ T+G Y + D + ++ + A Sbjct: 236 PGDGFQADKASERTANLLSRGLEGLRCATLG-------GYFTTWCDNDARAAVARVAGAL 288 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIG 354 A E+ P + A A +IIS AE G +Y LR + + Sbjct: 289 AAHEELIFPEAELARSAAFIISAAEG--------GNQYLTALRSQPER------------ 328 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 F + R++ G + S + YL+A++ R ++ F F DV++ P TP SA Sbjct: 329 FEPNSRERLLAGAMIPS-----AWYLQAQRFRRHAQQAFKALFAHA-DVLIAPATPCSAT 382 Query: 415 PLGKEENN--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +G + SMG + T ++ GLP ++VP + P+GLQLI Sbjct: 383 LIGAQNMEINGQPLPIRASMG-----MLTQPISFLGLPVVTVPLRTASGQ-PIGLQLIAA 436 Query: 467 PFREETLFSVGQIIEK 482 PF E+ V + +E+ Sbjct: 437 PFNEQACLRVARALEE 452 >gi|257056983|ref|YP_003134815.1| putative amidase [Saccharomonospora viridis DSM 43017] gi|256586855|gb|ACU97988.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] Length = 469 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 139/469 (29%), Positives = 216/469 (46%), Gaps = 40/469 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++S VE + + AI+ + + +A+ V + A AAA S++R G+ L+G+P + Sbjct: 21 ELSPVEATRAALDAIDEYDPEYHAFTLVDPESALAAARGSEERWREGNPIGWLDGVPALV 80 Query: 79 KDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD F T+G T S +D RP +S +T ++ ++G V+LGK E + ++ Sbjct: 81 KDMFLTRGWPTLRGSLCIDRDRPWEVDSPITARMREHGLVLLGKTTTPELGWKAVTDSPL 140 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW T GGSSGGS+ AVA + S+GTD GGS+R PASF G VG K Sbjct: 141 DGVTRNPWDP-----ALTSGGSSGGSAVAVATGMGELSVGTDGGGSVRIPASFCGIVGFK 195 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PT GR F +L AG + R+V D A+LL +A D D + + L Y A+ Sbjct: 196 PTGGRIPLYPASPFG-ALAHAGPMARSVDDVALLLDVLAMPDHRDPSSLPLSSGTYREAV 254 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ + P I + ++ L +AG + E A P + Sbjct: 255 RRDVRGLRAAYSPALGYLDVDPEITQLVASVVAVLGEAGLTVEE--------ADPGF--T 304 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL--SSRCY 375 P EA L ++ L+ F + HR+ G + R Y Sbjct: 305 DPIEAFGVLWSTGAAKW---------LD--------SFPEGSGHRVDPGLRRVWERGRTY 347 Query: 376 DSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDV 433 + YL A R + E F DV+LTPT P F +G + SG Sbjct: 348 SARDYLDATAERMALGIHMGE-FHTHYDVLLTPTMPVQPFEVGHDVPPGSGLTDWPQWTG 406 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT NM PA+SVPA + +P+GLQ++G ++ + +V +++E+ Sbjct: 407 FTYPFNMTQQPAVSVPAGFTSQGLPVGLQIVGPRHSDDLVLAVARLVEE 455 >gi|52143359|ref|YP_083470.1| amidase [Bacillus cereus E33L] gi|51976828|gb|AAU18378.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus E33L] Length = 491 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 147/501 (29%), Positives = 228/501 (45%), Gaps = 58/501 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ + + ++N+ +E+ A +R Sbjct: 13 LTIHDIQKAMEDEKLTSKELVMYYLHRVAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV+LGK Sbjct: 73 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVILGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGD--DDMIVGGSSTGSAIAVASNFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PK+Y Y + D K +++ Sbjct: 251 IDEKDVATHKSEGIAEHDYTKYLDVNGLHGAKIGVYSNAPKDY---YETGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEGIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTMPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDFPNTLRNPEYLHAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 D L K+ N + Y + + AG P+I++PA E P G+ Sbjct: 414 DFAL------------KKYNLDAILFPSY--IGSTICAKAGYPSIAIPAGYMEDGRPFGI 459 Query: 462 QLIGQPFREETLFSVGQIIEK 482 + F E TL + E+ Sbjct: 460 TIASTAFSEGTLIKLAYAFEQ 480 >gi|222081229|ref|YP_002540592.1| hypothetical protein Arad_7518 [Agrobacterium radiobacter K84] gi|221725908|gb|ACM28997.1| amidase family protein [Agrobacterium radiobacter K84] Length = 456 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 133/480 (27%), Positives = 212/480 (44%), Gaps = 59/480 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 L+S + V L + + AI + Q +I ++ ++AR A + KR+ +G +R L +GI Sbjct: 17 LQSGALDPVALAEESLDAIRSHKDQA-IFISLLEERAREEAASASKRLRDGRSRGLLDGI 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 PI KD FA +G+ T A S +L P E + + Q L + G V +G++NM EFA Sbjct: 76 PIAWKDLFAIRGLPTTAGSTVLAREAPASEDADIVQALAEAGMVSVGRVNMSEFAFSGLG 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +YG ++P + + PGGSS GS+ AVA L SIGTDTGGS+R P++F G Sbjct: 136 LNPHYGTSLNP---LSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAFNGL 192 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG K + GR S G+ A SLD G + R+V+D+ + DA L P Sbjct: 193 VGYKASRGRYSMAGVFPLATSLDSLGPLCRSVQDAIWV----------DAAMRRLTAPQI 242 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 RA S++ +++ +P+ +D + + + + I L+ AG ++ + P Sbjct: 243 VRA---SLKDISLVVPETIVMDDIEDGVRQAFDAAILRLQQAGVRVRRAAFPTFSGVFDL 299 Query: 314 YYIISP-AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 P A + YD R+ G D M R ++ L Sbjct: 300 MAKHGPMVTAEAYALHYD------RLSGPDATAM--------------DRRVVARTSLGQ 339 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + Y+ K R + +F A + I PT A PL ++ +D Sbjct: 340 KIGLIDYIALLKGRERLIEEFATATAPN-EFIAYPTVAHVAPPLAPLRDD--------DD 390 Query: 433 VF----------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +F T+ N +S+P + MP+G L + R+ETL + +E+ Sbjct: 391 LFVKTNAKTLRNTLIGNFLDGCGVSLPCGTGDGGMPVGFLLSAKRDRDETLLAAALAVEQ 450 >gi|218194194|gb|EEC76621.1| hypothetical protein OsI_14505 [Oryza sativa Indica Group] Length = 601 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 40/463 (8%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 ++ N M + A R AE S KR G+ L+GI I IKD + Sbjct: 150 VEEWSNKKPPMPMLVYFNADDLRKQAEASTKRFQQGNPISILDGIFIAIKDDIDCFPYPS 209 Query: 90 QACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 + + D R ++ +L G + +GK NM E +G + YG +P Sbjct: 210 KGATTFFDKIRSVEKDAVCVARLRKCGVLFIGKANMHELGLGVTGNNPNYGTARNP---- 265 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 S D++T GGSS G +A V+ LC+A+IGTD GGS+R P+S G +G+K TYGR G Sbjct: 266 HSIDRYT-GGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSSLCGIIGLKTTYGRTDMTGA 324 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYERALDQSIQG-M 264 + +++ A + +V D+ ++ AIAG D + L VP+ + +I G + Sbjct: 325 LCDCGTVEVASPLAASVEDALLVYSAIAGSRPMDKLTLRPSPLCVPNLVSPDNNNILGSV 384 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEAS 323 +G E+ D I T + ++ L + G +I EI LP + A+ + E+ Sbjct: 385 KIGKYTEWFHDVSDRDISNTCEDALNLLCSSFGCQIEEIILPELEEMRTAHVVSIGTESF 444 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI-MIGTYVLSSRCYDSHYLRA 382 +L + R G R E F + + + + G++ + Y+ + Sbjct: 445 CDLNPH--YRAGKRTE---------------FTLDTRTSLALFGSFT------STDYVAS 481 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI---YNDVFTVAVN 439 ++IR I EAF++ VDVI TPTT +A + + G ++ Y F +A N Sbjct: 482 QRIRRRIMYYHNEAFKK-VDVIATPTTGITAPEIPQSSLKLGESNYVVSAYLMRFVIAGN 540 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + GLPAI+VP ++ +P+GLQLIG+P+ E +L V IE+ Sbjct: 541 LLGLPAITVPVGHDKQGLPIGLQLIGRPWGEASLLRVASAIEE 583 >gi|296536660|ref|ZP_06898729.1| amidase [Roseomonas cervicalis ATCC 49957] gi|296263012|gb|EFH09568.1| amidase [Roseomonas cervicalis ATCC 49957] Length = 504 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 120/407 (29%), Positives = 194/407 (47%), Gaps = 16/407 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD G+ + L G+ P ++T+ +L D GA +LGK + + F + Sbjct: 88 LAGKRVALKDNVCLAGVPMMNGAATLQGYVPDLDATIVTRLLDAGATILGKAHCESFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +P R ++ GGSS GS+A VA +IG D GGSIR PASF Sbjct: 148 GGSHTSALGPVHNPHRH-----GYSAGGSSSGSAALVAAGEVELAIGGDQGGSIRIPASF 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KP++G GI+ ++D G +T V D+A++L+ +AG D D +P Sbjct: 203 CGIYGMKPSWGLVPYTGIMPIEATIDHTGPMTANVADNALMLEVLAGPDGLDPRQSGVPA 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL + +QGM +G+ KE + P +D + + + GA + E+S+P + Sbjct: 263 APYTEALGKGVQGMRIGLVKEGFGWPASQPEVDAKLRDAAARFEKLGAVVEEVSVPMHRI 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRY---GLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + I + + R +G+ + GL G R+ +K + IG Sbjct: 323 GKDIWAPIGNEGLQAQMMRGNGMGFNWKGLYTVGLLDAHAPWRERANDLSDTLKLSMFIG 382 Query: 367 TYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 Y SR Y +Y +A+ I + D+ A + D++L PT P A PL + Sbjct: 383 EYF--SRYYRGRYYAKAQNIARRLTADYDAALAR-YDLLLMPTLPMVATPLPPADAPLAL 439 Query: 426 MGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + ++ T ++ G PA+S+P L + +P+G LIG + E Sbjct: 440 IAQRAFEMLPNTCPTDVTGHPAMSLPCGLVD-GLPVGAMLIGPRWGE 485 >gi|116317778|emb|CAH65756.1| OSIGBa0123D13.5 [Oryza sativa Indica Group] Length = 608 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 40/463 (8%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 ++ N M + A R AE S KR G+ L+GI I IKD + Sbjct: 157 VEEWSNKKPPMPMLVYFNADDLRKQAEASTKRFQQGNPISILDGIFIAIKDDIDCFPYPS 216 Query: 90 QACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 + + D R ++ +L G + +GK NM E +G + YG +P Sbjct: 217 KGATTFFDKIRSVEKDAVCVARLRKCGVLFIGKANMHELGLGVTGNNPNYGTARNP---- 272 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 S D++T GGSS G +A V+ LC+A+IGTD GGS+R P+S G +G+K TYGR G Sbjct: 273 HSIDRYT-GGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSSLCGIIGLKTTYGRTDMTGA 331 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYERALDQSIQG-M 264 + +++ A + +V D+ ++ AIAG D + L VP+ + +I G + Sbjct: 332 LCDCGTVEVASPLAASVEDALLVYSAIAGSRPMDKLTLRPSPLCVPNLVSPDNNNILGSV 391 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEAS 323 +G E+ D I T + ++ L + G +I EI LP + A+ + E+ Sbjct: 392 KIGKYTEWFHDVSDRDISNTCEDALNLLCSSFGCQIEEIILPELEEMRTAHVVSIGTESF 451 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI-MIGTYVLSSRCYDSHYLRA 382 +L + R G R E F + + + + G++ + Y+ + Sbjct: 452 CDLNPH--YRAGKRTE---------------FTLDTRTSLALFGSFT------STDYVAS 488 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI---YNDVFTVAVN 439 ++IR I EAF++ VDVI TPTT +A + + G ++ Y F +A N Sbjct: 489 QRIRRRIMYYHNEAFKK-VDVIATPTTGITAPEIPQSSLKLGESNYVVSAYLMRFVIAGN 547 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + GLPAI+VP ++ +P+GLQLIG+P+ E +L V IE+ Sbjct: 548 LLGLPAITVPVGHDKQGLPIGLQLIGRPWGEASLLRVASAIEE 590 >gi|38344767|emb|CAE01584.2| OSJNBa0068L06.10 [Oryza sativa Japonica Group] gi|73921309|gb|AAZ94202.1| N-acylethanolamine amidohydrolase [Oryza sativa Japonica Group] gi|222628235|gb|EEE60367.1| hypothetical protein OsJ_13498 [Oryza sativa Japonica Group] Length = 601 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 40/463 (8%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 ++ N M + A R AE S KR G+ L+GI I IKD + Sbjct: 150 VEEWSNKKPPMPMLVYFNADDLRKQAEASTKRFQQGNPISILDGIFIAIKDDIDCFPYPS 209 Query: 90 QACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 + + D R ++ +L G + +GK NM E +G + YG +P Sbjct: 210 KGATTFFDKIRSVEKDAVCVARLRKCGVLFIGKANMHELGLGVTGNNPNYGTARNP---- 265 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 S D++T GGSS G +A V+ LC+A+IGTD GGS+R P+S G +G+K TYGR G Sbjct: 266 HSIDRYT-GGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSSLCGIIGLKTTYGRTDMTGA 324 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYERALDQSIQG-M 264 + +++ A + +V D+ ++ AIAG D + L VP+ + +I G + Sbjct: 325 LCDCGTVEVASPLAASVEDALLVYSAIAGSRPMDKLTLRPSPLCVPNLVSPDNNNILGSV 384 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEAS 323 +G E+ D I T + ++ L + G +I EI LP + A+ + E+ Sbjct: 385 KIGKYTEWFHDVSDRDISNTCEDALNLLCSSFGCQIEEIILPELEEMRTAHVVSIGTESF 444 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI-MIGTYVLSSRCYDSHYLRA 382 +L + R G R E F + + + + G++ + Y+ + Sbjct: 445 CDLNPH--YRAGKRTE---------------FTLDTRTSLALFGSFT------STDYVAS 481 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI---YNDVFTVAVN 439 ++IR I EAF++ VDVI TPTT +A + + G ++ Y F +A N Sbjct: 482 QRIRRRIMYYHNEAFKK-VDVIATPTTGITAPEIPQSSLKLGESNYVVSAYLMRFVIAGN 540 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + GLPAI+VP ++ +P+GLQLIG+P+ E +L V IE+ Sbjct: 541 LLGLPAITVPVGHDKQGLPIGLQLIGRPWGEASLLRVASAIEE 583 >gi|302528690|ref|ZP_07281032.1| amidase [Streptomyces sp. AA4] gi|302437585|gb|EFL09401.1| amidase [Streptomyces sp. AA4] Length = 470 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 139/490 (28%), Positives = 223/490 (45%), Gaps = 37/490 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ ++ E RLR++++SA E++ +++ IE N Q+NA + + A++A + A +D+R Sbjct: 5 EICYLPAVELARRLRTRELSAREVLQAHLDRIEQGNPQINAIVTLTAERALSEAAAADER 64 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + +G+ L GIP+ KD G+ T S I P ++ V +++ GA+ LGK Sbjct: 65 LAHGEEIGPLHGIPVAHKDTHDVAGVRTTYGSPIFADHVPDSDTLVVERIRKAGALTLGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF GS +G +P+R S SSGG++AA+A L + G+D G Sbjct: 125 TNAPEFGAGSHTMNPVFGATRNPYRRDLSAGG-----SSGGAAAALAAGLQPLAEGSDMG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PASF VG++P+ GR +L G + RTV D A+LL IAG DE Sbjct: 180 GSLRNPASFCNVVGLRPSPGRVPTWPATLPWEALGVQGPMGRTVADVALLLSVIAGPDER 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + ++ P + LD + G+ V + + P + + + G ++ Sbjct: 240 NPISLDQPAAPFAGPLDADLAGLRVAWSPDLGGLPVDPAVTAVLEPAVKVFAGLGCRVE- 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 PA ++ A+ R G GK +LE + + Q + Sbjct: 299 ----------PACPDLTAADEVFRTLRGWLFHAGF---GK-LLEQHPDK----MKQTLAD 340 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-- 419 I G LS S R ++ T ++ FT+ D++L P + FP+ E Sbjct: 341 NIAFGAK-LSGADLASAQTRQLQLITGMREFFTQ-----YDLLLAPVSQVPPFPVEWEYP 394 Query: 420 ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET-LFSV 476 E +G H Y + A ++ G PA+SVPA E P+GLQ+I P R E L Sbjct: 395 EVVAGQPMHDYLEWMRSAYSISATGCPALSVPAGFTEDGRPVGLQVIA-PLRGELGLLRA 453 Query: 477 GQIIEKEAGY 486 E+ G+ Sbjct: 454 AHAFEQATGH 463 >gi|115456792|ref|NP_001051996.1| Os04g0102700 [Oryza sativa Japonica Group] gi|113563567|dbj|BAF13910.1| Os04g0102700 [Oryza sativa Japonica Group] Length = 608 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 40/463 (8%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 ++ N M + A R AE S KR G+ L+GI I IKD + Sbjct: 157 VEEWSNKKPPMPMLVYFNADDLRKQAEASTKRFQQGNPISILDGIFIAIKDDIDCFPYPS 216 Query: 90 QACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 + + D R ++ +L G + +GK NM E +G + YG +P Sbjct: 217 KGATTFFDKIRSVEKDAVCVARLRKCGVLFIGKANMHELGLGVTGNNPNYGTARNP---- 272 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 S D++T GGSS G +A V+ LC+A+IGTD GGS+R P+S G +G+K TYGR G Sbjct: 273 HSIDRYT-GGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSSLCGIIGLKTTYGRTDMTGA 331 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYERALDQSIQG-M 264 + +++ A + +V D+ ++ AIAG D + L VP+ + +I G + Sbjct: 332 LCDCGTVEVASPLAASVEDALLVYSAIAGSRPMDKLTLRPSPLCVPNLVSPDNNNILGSV 391 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEAS 323 +G E+ D I T + ++ L + G +I EI LP + A+ + E+ Sbjct: 392 KIGKYTEWFHDVSDRDISNTCEDALNLLCSSFGCQIEEIILPELEEMRTAHVVSIGTESF 451 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI-MIGTYVLSSRCYDSHYLRA 382 +L + R G R E F + + + + G++ + Y+ + Sbjct: 452 CDLNPH--YRAGKRTE---------------FTLDTRTSLALFGSFT------STDYVAS 488 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI---YNDVFTVAVN 439 ++IR I EAF++ VDVI TPTT +A + + G ++ Y F +A N Sbjct: 489 QRIRRRIMYYHNEAFKK-VDVIATPTTGITAPEIPQSSLKLGESNYVVSAYLMRFVIAGN 547 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + GLPAI+VP ++ +P+GLQLIG+P+ E +L V IE+ Sbjct: 548 LLGLPAITVPVGHDKQGLPIGLQLIGRPWGEASLLRVASAIEE 590 >gi|271964408|ref|YP_003338604.1| amidase [Streptosporangium roseum DSM 43021] gi|270507583|gb|ACZ85861.1| Amidase [Streptosporangium roseum DSM 43021] Length = 463 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 128/488 (26%), Positives = 217/488 (44%), Gaps = 42/488 (8%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++ +E LR++ +SAVEL+ ++++ IE N ++NA + +VA++A AEE+D+ + Sbjct: 3 YLTATEMLRLLRTRQVSAVELLRAHLRRIEEVNPRVNAVVTLVAERALREAEEADRDLAR 62 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L G+P+ KD T GI T S + P +S + +++ + GA+ +GK N Sbjct: 63 GRWRGPLHGLPVAHKDLADTAGIRTTYGSPLFADHVPDADSLIVRRMREAGAITVGKTNT 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF GS +G +P+ S SSGG++AA+A + + G+D GGS+ Sbjct: 123 PEFGTGSHTVNEIFGATRNPYDLSRSAGG-----SSGGAAAALASGMVPLADGSDMGGSL 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF VG++PT GR + +L G + RTV D A+L+ +AG+D Sbjct: 178 RNPASFCNVVGLRPTPGRVPSPSPTAAWFTLGVPGPMARTVEDLALLMSVVAGFDAASPL 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI--VEI 302 V + L+ + G+ V + + K Q + L GA++ VE+ Sbjct: 238 AVAESGAVFTEPLELDLTGLRVAWSPDLGGLPVDAETAKVTAQAPAVLAGLGARVERVEL 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 L ++A Y Y L Y + G V+ Sbjct: 298 DL---------------SDAEDAFRTYRAWHYALS---------YGDLPQDRLGPNVRWN 333 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG----K 418 + G V + RA ++R+ + R T AF D ++ P + FP+ Sbjct: 334 VERGRAVTG-----ADLARAERLRSGLYRRMT-AFFDTYDFLIAPVSQVPPFPVDAPYVS 387 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E N ++ +++ PA SVP +P+GLQ++G+PF + + + Sbjct: 388 EINGEALPDYLAWMRSAYWISVLHAPAASVPCGFTAGGLPVGLQIVGRPFADLRVLRLAH 447 Query: 479 IIEKEAGY 486 E+ G+ Sbjct: 448 AFERATGH 455 >gi|229121642|ref|ZP_04250867.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus 95/8201] gi|228661862|gb|EEL17477.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus 95/8201] Length = 493 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 253 LDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 416 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 461 ITLASTAFSEGTLIKLAYAFEQATNH 486 >gi|228927159|ref|ZP_04090222.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832485|gb|EEM78059.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 493 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 253 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 416 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 461 ITLASTAFSEGTLIKLAYAFEQATNH 486 >gi|170698946|ref|ZP_02890005.1| Amidase [Burkholderia ambifaria IOP40-10] gi|170136126|gb|EDT04395.1| Amidase [Burkholderia ambifaria IOP40-10] Length = 494 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 218/492 (44%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A E D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNALVSLRDRATLLAEAAEKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L G+P KD TKG+ T + S I P +S ++ GA+ +GK N Sbjct: 82 GEYHGWLHGMPQAPKDLAMTKGLRTTSGSPIFRDNVPQADSVGVGRMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS +G +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVHGATRNPYDLTKSA-----GGSSGGTAAALAARMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G++P+ GR R + F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGLRPSQGRVPRWPAVDVFMQQLGIEGPMGRTVGDVAQLLSIQAGYDPNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + ++LD+ ++G + ++ YL+ P + ++G++ L++ G + Sbjct: 257 LSLAEDPVVFTKSLDKDLRGARIAWVGDWN-GYLATEPGVLAQCEKGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R V L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APDRIWRLWLVHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + ++ +F D I PT FP E+ Sbjct: 360 YEVEGLLAMQGAEVFDASIERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVEQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P ISVP + +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYEQAADW 483 >gi|167579033|ref|ZP_02371907.1| indole acetimide hydrolase [Burkholderia thailandensis TXDOH] Length = 447 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 132/452 (29%), Positives = 215/452 (47%), Gaps = 45/452 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A + + AR AA D +I +G L G+P IKD T + T+ S L GF Sbjct: 25 LAAMTHIAPEIARQAAANVDAQIASGRRLPLAGVPFVIKDNLFTSDMPTRGASPALLGFG 84 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ ++G V +P GGSS Sbjct: 85 ATCNATAVQQLLDAGAVPLGKANMHELAFGITSANGHFGAVRNPHDPARLA-----GGSS 139 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG+++AVA + +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 140 GGTASAVAAGI-PFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTHGVLALSPTRDTVGT 198 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I ++ D +L + G DAT P P ++ G+ +G+P D L P Sbjct: 199 IAHSIDDLLLLDAVLTG----DAT---EPAP-------VALAGLRIGVPDAPYFDGLDPA 244 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVE 339 + + ++ ++ L +AGA+++ ++ A + EA +A ++ + Y R Sbjct: 245 VAEMTERALAALTNAGARLIPLA---------ARALHEADEACGFPIAGFEALAYWQRFS 295 Query: 340 GKDI-LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 + + L E +G +V+H + T + + D+ Y A + I R + +AF Sbjct: 296 AERLDLPFAEFVARLG-SDDVRH--IFRTLIDAPPSSDA-YAAAIDVLQSIVRWYDQAFH 351 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAA 451 + GVD I PT A PL + Y +F T + G+P++SVPA Sbjct: 352 RTGVDCIALPTVQCEA-PLVAASGHDLPPDAAYA-LFARVIRQTGPATLGGVPSVSVPAG 409 Query: 452 LCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 L + +P+GL L G + L ++ + +E+ Sbjct: 410 LSKHTGVPVGLMLEGPAGNDRRLLAIAREVER 441 >gi|113711|sp|P27765|AMID_PSECL RecName: Full=Amidase gi|216851|dbj|BAA14244.1| amidase [Pseudomonas chlororaphis] Length = 506 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 122/429 (28%), Positives = 214/429 (49%), Gaps = 23/429 (5%) Query: 64 INGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +NG AR+ L G + +KD + G+ + L+GF P +++TV +L D GA +LGK Sbjct: 82 VNG-AREGLLAGKTVALKDNISLAGVPMMNGAAPLEGFVPGFDATVVTRLLDAGATILGK 140 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + + + + TS PV +P R + GGSS GS+A VA ++G D G Sbjct: 141 ATCEHYCLSGGSHTSDPAPVHNPHRH-----GYASGGSSSGSAALVASGEVDIAVGGDQG 195 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++F GT G+KPT+G G+++ ++D G IT VRD+A++L+A+AG D Sbjct: 196 GSIRIPSAFCGTYGMKPTHGLVPYTGVMAIEATIDHVGPITGNVRDNALMLQAMAGADGL 255 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V DY L++ + G+ +G+ +E + L P + + I+ L+ GA + Sbjct: 256 DPRQAAPQVDDYCSYLEKGVSGLRIGVLQEGFALANQDPRVADKVRDAIARLEALGAHVE 315 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIG--FGQ 357 +S+P A ++ I + + +G + + + +L+ + R Sbjct: 316 PVSIPEHNLAGLLWHPIGCEGLTMQMMHGNGAGFNWKGLYDVGLLDKQASWRDDADQLSA 375 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +K + +G Y L SR +Y +A+ + ++ + +A Q D+++ PTTP +A P Sbjct: 376 SLKLCMFVGQYGL-SRYNGRYYAKAQNLARFARQGYDKAL-QTYDLLVMPTTPITAQPHP 433 Query: 416 ---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E + ++ I N T ++ G PA+S+P L + +P+GL L+ + + E T Sbjct: 434 PANCSITEYVARALEMIGN---TAPQDITGHPAMSIPCGLLD-GLPVGLMLVAKHYAEGT 489 Query: 473 LFSVGQIIE 481 ++ E Sbjct: 490 IYQAAAAFE 498 >gi|70607881|ref|YP_256751.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] gi|68568529|gb|AAY81458.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] Length = 461 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 127/463 (27%), Positives = 213/463 (46%), Gaps = 39/463 (8%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 R+++ + +IS+ ELV +++ + N ++NA I + K A A+E D G + L Sbjct: 6 REKVCNGEISSEELVTRFLERVNELNPKVNA-IVTLNDKVMAEAKEMDSLAKKGICKPLH 64 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+ IKD TKGI T S + F P +S ++++L + GA++LGK NM EF + Sbjct: 65 GIPVTIKDNILTKGIRTTFGSVLFKDFVPDEDSIISERLKEAGALILGKTNMPEFGLVGI 124 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + +G +PW D T TPGGSSGGS+ ++A SIG D GGSIR P+SF G Sbjct: 125 TDNPLFGVTKNPW---DLTR--TPGGSSGGSAVSIALGFSPISIGNDGGGSIRIPSSFCG 179 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KP+ + + + G ITR V D+ + ++ ++G D D + +P + Sbjct: 180 VFGFKPSPHVIPKYPPPNTFRGISVDGPITRYVSDAILTMRILSGPDLRDRRSLTVPKIN 239 Query: 253 YERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + LD++ ++ + + + + ++KT + + ++ G + ++ P L Sbjct: 240 FSEELDKNEVKRIRIAYSRNLGYGVVDSKVEKTVEDAVYRFRELGVETIDEINPE----L 295 Query: 312 PAYYIISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 P Y + + A YD + +V K L F ++ YV Sbjct: 296 PNLYKALMTKITVEFATFIYDKLEEWKKVTYKPYL---------NFLLPYFEKLTYHDYV 346 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP----LGKEENNSGS 425 D + + + Q D ++TPT AF +G E N Sbjct: 347 KVDNEVDKLWSKLSNVF------------QKYDYLITPTVSVVAFKIEEGIGPSEINGQK 394 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 +G F+ N+ G PA S+P L +P+G+Q+IG+P+ Sbjct: 395 VGFGEWSPFSFPFNLTGQPASSIPVGLV-NNLPVGMQIIGKPY 436 >gi|228914679|ref|ZP_04078288.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844998|gb|EEM90040.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 493 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 253 LDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 416 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 461 ITLASTAFSEGTLIKLAYAFEQATNH 486 >gi|91790199|ref|YP_551151.1| amidase [Polaromonas sp. JS666] gi|91699424|gb|ABE46253.1| Amidase [Polaromonas sp. JS666] Length = 471 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 138/490 (28%), Positives = 228/490 (46%), Gaps = 36/490 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 + F++ ++ L ++++V LV + I + +NA++EV A AA +SD R Sbjct: 2 DFAFLSATDLGLALAKGELTSVALVTELLARIRTYDPILNAFVEVYGDAALLAARDSDGR 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 AR L+G+P +KD F +G T A S +T ++L G V+LGK Sbjct: 62 RSRNQARGPLDGVPFAVKDLFDVEGHATLAGSKASAPAAAAQSATAVRRLLAEGMVLLGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + EFA GS G ++P D + PGGSS GS AVA L ++GTDTG Sbjct: 122 THTVEFAYGSWGTNPSCGTPVNPR---DPIVQRVPGGSSSGSGVAVAAGLVPVALGTDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R P++ G VG+K + G R G+ A D G +TR+V D A++ A+ G D Sbjct: 179 GSVRSPSALCGIVGMKTSLGLIGRGGVQPLALVFDAVGPMTRSVEDVALIQAALQGEDAD 238 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D +P D L++ + G+T+ P L P I +++ ++ LK GA + E Sbjct: 239 DPATFGVPRTDSLVDLNKGVAGLTLRYPTMENLKAAEPDILDRFKETLADLKAMGAVLDE 298 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDG-VRYGLRVEGKDILEMYENTRSIGFGQEVK 360 LP L Y A ++N+ + RY +E ++ L E + G+ + Sbjct: 299 TPLPR---PLETY-----ATLTANITTVEAWSRYRHLIEKENSLVDPEIATRMSRGRTMS 350 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 +G YL R+ L++ +F F G + +L P++P +A P+ Sbjct: 351 ITDYLG------------YLEQRR---LMQTEFHRYF-AGANAVLLPSSPITAKPIDGVH 394 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N + G +FT N+ L ++S+P E +P +Q++ + + + F +G+ + Sbjct: 395 NTNAPFG-----LFTRLANLMDLASLSIPMGDAE-GLPTAVQIMVRRYADPLAFRIGRAL 448 Query: 481 E-KEAGYFRP 489 E + G F P Sbjct: 449 EIQRGGLFVP 458 >gi|332160641|ref|YP_004297218.1| Amidohydrolase, AtzE family [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604510|emb|CBY26008.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Yersinia enterocolitica subsp. palearctica Y11] gi|325664871|gb|ADZ41515.1| Amidohydrolase, AtzE family [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862551|emb|CBX72706.1| hypothetical protein YEW_JG40540 [Yersinia enterocolitica W22703] Length = 465 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 132/490 (26%), Positives = 219/490 (44%), Gaps = 43/490 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +++ + ++E + L ++SA E+ + I +N +NAY + A + + A D Sbjct: 1 MKQISTLTITEIQQALNLGELSAQEIALHTLDTISAANPAINAYTHITADRMLSEAYRLD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 G A L IP +K+ F G T A + + P ++ V +L GA++ Sbjct: 61 TLRTKGQALPALAAIPYAVKNLFDVAGETTLAGASLFCERAPARQDAPVISRLAQQGAML 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P R ++ + GGS+ +A + F ++G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATRNP-RDVNRIAGGSSGGSAAAVAAGLVNF----ALGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR PAS G G+KPT+GR SR G F SLD G + R +D A + + G Sbjct: 176 DTNGSIRVPASLCGIFGLKPTFGRLSRRGTHPFVASLDSIGPMARCTQDLAAVYDVMQGT 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D+ + PV L QG+ + Y + Q L+ A Sbjct: 236 DIQDSFQSDKPVSPCLNLLSPGQQGLRSAVLGGYFRQWCDDDAKAAVQAVAKGLEAA--- 292 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFG 356 E+ +P + A A +IIS E G +Y LR + F Sbjct: 293 -TEVEMPQSDLARTAAFIISATEG--------GNQYLPALRTSPQR------------FE 331 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + R++ G + + S Y++A++ R ++ FE D+++ P TP SA + Sbjct: 332 PHSRERLLAGAMLPA-----SWYIQAQRFRHHFRQQILPLFEHW-DILIAPVTPCSATLI 385 Query: 417 GKEE---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+E N++ + T ++ GLP ++VP +P+G+QLI P+RE+ Sbjct: 386 GQEMMRINDTELPIRANMGMLTQPISFLGLPVVTVPLR-TAGGLPIGVQLIAAPWREDLC 444 Query: 474 FSVGQIIEKE 483 +E++ Sbjct: 445 LRAAYALEQQ 454 >gi|301053613|ref|YP_003791824.1| amidase [Bacillus anthracis CI] gi|300375782|gb|ADK04686.1| amidase [Bacillus cereus biovar anthracis str. CI] Length = 491 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 LDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQATNH 484 >gi|196039845|ref|ZP_03107149.1| amidase family protein [Bacillus cereus NVH0597-99] gi|196029548|gb|EDX68151.1| amidase family protein [Bacillus cereus NVH0597-99] Length = 491 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 147/502 (29%), Positives = 228/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGVRGQLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 LDEKDVATHKSKGIAEHDYTKFLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E L + E+ Sbjct: 459 ITLASTAFSEGILIKLAYAFEQ 480 >gi|186682592|ref|YP_001865788.1| amidase [Nostoc punctiforme PCC 73102] gi|186465044|gb|ACC80845.1| Amidase [Nostoc punctiforme PCC 73102] Length = 466 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 142/497 (28%), Positives = 218/497 (43%), Gaps = 44/497 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ + S+ R + +S V + ++ I N+ +NA+ V A A A+ S+ Sbjct: 1 MSDIADFSASQLLSLYRDRQLSTVAATKAALERINTYNNSVNAFAIVDENTALAEAQASE 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVM 118 R +NG+ R L +GIP +KD TKG+ T S + + E+ +L + GAV+ Sbjct: 61 VRWLNGNPRGLVDGIPFTVKDLLLTKGLPTLRGSKAITSHQSWEENAPAVDRLREQGAVL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK EF ++S G +PW + TPGGSSGG++ A A + + T Sbjct: 121 LGKTTTSEFGWKGVTDSSLTGITRNPWNT-----DLTPGGSSGGAAVAAALGMGTLHLAT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAG 237 D GGS R PA+ TG G KPT+GR S G S SL G++ RTV D+A L IA Sbjct: 176 DGGGSSRTPAALTGVFGFKPTFGRVS--GYPSAHTGSLFHIGVLVRTVTDAAFTLNVIAH 233 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + DY LD+ + G+ + Y ++ +D + D A Sbjct: 234 SDVRDWYALPDEKQDYTSDLDKGVAGLRIA----YSPNFGYTEVDVEVAALVKAAVDVFA 289 Query: 298 K---IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 K IVE P P + A A+ L G E + ++E G Sbjct: 290 KLDAIVEEVDPGFVNPRPIFQTFWQAGAAKLL-------RGFSPEQQAVIEE-------G 335 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 K R YL A+ R + R+ + F Q D++LTPT P AF Sbjct: 336 LQATAKE---------GDRLTLVEYLSAQDAREALGREM-QRFHQNYDLLLTPTLPIVAF 385 Query: 415 PLGKEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 P+G+ S S+ + D FT N+ PA S+P + +P+G+Q++ +++ Sbjct: 386 PVGQNRPQS-SIDPQHRDWTPFTYPFNLTQQPAASLPCGFTKNGLPVGIQIVAAKYKDLL 444 Query: 473 LFSVGQIIEKEAGYFRP 489 + + E + P Sbjct: 445 VLQAAKAYENVFPFIMP 461 >gi|331696270|ref|YP_004332509.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326950959|gb|AEA24656.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 470 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 130/479 (27%), Positives = 213/479 (44%), Gaps = 36/479 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++++ LR+ ++ L ++ I + ++++ Y+ + A A A+ +D + G Sbjct: 3 LTLTDAAAALRAGTTTSRALTEAAIATADRLDARVGTYLARFDEYALATADRADAELAAG 62 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILD-GFRPHYESTVTQKLWDNGAVMLGKLNM 124 R L GIP G+KD A T A S +LD + ++ V +L GAV+ GK Sbjct: 63 HDRGPLHGIPFGVKDIIAMAEGPTTAQSLVLDRSWGAGKDAPVVARLKAAGAVITGKTTT 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFT-PGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA G + + +PW D T PGGSS G+ + VA + A +GTDT GS Sbjct: 123 MEFACGMPDLGKPFPVPRNPW------DLETWPGGSSSGTGSGVAAGMFLAGLGTDTAGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA+ G G+ PT+GR + G + SLD G + R+ D A +L IAG D Sbjct: 177 IRIPAALCGITGLMPTFGRVPKSGCVPLGYSLDHIGPMARSAADCAAVLAVIAGSHASDP 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEI 302 CV+ P + GM +G+ +E D P + + ++ L+ +GA VE+ Sbjct: 237 DCVDAPF--TAEPVGDDFSGMRIGVVREGHFPDGADPALAPAFDAAVAQLEASGATTVEV 294 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LP + A + EA L D+ +++ + R Sbjct: 295 VLPLRAELMTADIVTMACEA-------------LAYHRTDMTTRWDDYFA-------ATR 334 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 MI + S + Y++A+++R + F + VDV+ PT A L + Sbjct: 335 AMIARGAMVS---GADYVQAQRMRRAGQLALGRLFAE-VDVVACPTISVGAPALQGYLDG 390 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + ++ + T + G P +++P MPL LQL G+PF E TL G + Sbjct: 391 TTEIMELFAHIHTGYWDSVGNPVLALPMGATASGMPLSLQLAGRPFEEATLLRAGSAFQ 449 >gi|49477478|ref|YP_036218.1| amidase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329034|gb|AAT59680.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 491 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 230/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQATNH 484 >gi|158423139|ref|YP_001524431.1| amidase [Azorhizobium caulinodans ORS 571] gi|158330028|dbj|BAF87513.1| glutamyl-tRNA(Gln) amidotransferase [Azorhizobium caulinodans ORS 571] Length = 471 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 151/486 (31%), Positives = 227/486 (46%), Gaps = 55/486 (11%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 SE +RS +SA +VD+ + I + + ++NA+ +V A +ARAAA+ D R G+ Sbjct: 17 SEIAAAVRSGAVSARAVVDAVLARIASVDPKVNAFTDVTADRARAAADALDARRAAGETL 76 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P +K+ F KG+ T+A S I P ++T+ +KL A++LG LNM E+ Sbjct: 77 GPLAGVPFAVKNLFDIKGLPTRAGSLINRELSPADRDATLVEKLEAADAILLGGLNMGEY 136 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A + E + GP +P T SSGGS AAVA L ++G+DT GSIR P Sbjct: 137 AYDFTGENVHDGPSRNPHDLGHMTGG-----SSGGSGAAVAAGLVPLTLGSDTNGSIRVP 191 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 +S G G+KPTYGR SR F + D G R+V D A+ A+ G D D V Sbjct: 192 SSLCGIFGLKPTYGRLSRAHSFPFVSAFDHLGPFARSVEDLALAYDAMQGADAADPVQVE 251 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI---VEISL 304 PV AL Q I + + + Y K + I+ + A + + L Sbjct: 252 RPVEPTTPALGQGIADLRIALAGGY-------FRQKGMPEAIAAVDHVAAALGVSRTVEL 304 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P A A Y+I+ AE +S A LR +D F V+ R++ Sbjct: 305 PEAARARAAAYVITAAEGASLHAER------LRTRPQD------------FDPAVRDRLI 346 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK------ 418 G + ++ + R R R + + F E VDVIL P TP A LG+ Sbjct: 347 AGLAIPAAWVAGAQRFR-RHFRARMLKLFEE-----VDVILAPATPCRAPKLGQATMVLD 400 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++G ++T ++ GLP +VP L + +P+G+Q+I P+RE+ V Sbjct: 401 GVELAVRPNLG-----IYTQPISFIGLPVAAVPVWL-DGGLPIGVQVIAPPWREDLALRV 454 Query: 477 GQIIEK 482 +E+ Sbjct: 455 AYHLEQ 460 >gi|297794035|ref|XP_002864902.1| N-acylethanolamine amidohydrolase [Arabidopsis lyrata subsp. lyrata] gi|297310737|gb|EFH41161.1| N-acylethanolamine amidohydrolase [Arabidopsis lyrata subsp. lyrata] Length = 607 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 136/497 (27%), Positives = 223/497 (44%), Gaps = 41/497 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAE 57 MS + + + RSK + +++ I IE I A + AE Sbjct: 123 MSSFRYWKIRDYAYAYRSKLTTPLQVAKRIISIIEEFGYDKPPTPFLISFDANEVIKQAE 182 Query: 58 ESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNG 115 S +R G+ L+GI + IKD T + L R +S V KL G Sbjct: 183 ASTQRFEQGNPISVLDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCG 242 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A++LGK NM E MG++ S YG +P S T GGSS GS+A VA LC+A+ Sbjct: 243 AILLGKANMHELGMGTTGNNSNYGTTRNPHDSKRYT-----GGSSSGSAAIVAAGLCSAA 297 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTD GGS+R P++ G G+K TYGR G + +++ G + ++ D+ ++ AI Sbjct: 298 LGTDGGGSVRIPSALCGITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAI 357 Query: 236 AGYDECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 G D + P + + L +I + +G ++ D S I + + Sbjct: 358 LGSSSADRFNLKPSPPCFPKLLSHNGSNAIGSLRLGKYTKWFNDVNSSDISDKCEDILKL 417 Query: 292 L-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L + G K+VEI +P + A+ I + S+L Y E ++ +T Sbjct: 418 LSNNHGCKVVEIVVPELEEMRAAHVISIGSATLSSLTPY--------CEAGKNSKLTYDT 469 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ ++ + S Y+ A+ +R + F+ VDVI+TPTT Sbjct: 470 RT--------------SFAIFRSFSASDYITAQCLRRRLMEYHMNIFKD-VDVIVTPTTG 514 Query: 411 TSAFPLGKEENNSGSMG-HIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +A + + +G + D+ F +A N+ G PAISVP ++ +P+GLQ++G+P Sbjct: 515 MTAPVIPPDALKNGETNFQVTTDLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRP 574 Query: 468 FREETLFSVGQIIEKEA 484 + E T+ + +E+ A Sbjct: 575 WAEATVLGLAAAVEELA 591 >gi|297183614|gb|ADI19741.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 440 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 132/485 (27%), Positives = 229/485 (47%), Gaps = 72/485 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ ++V+E +L+ +I + ELV SYI+ I + Q+ A+ A + A++ D Sbjct: 3 LSSLSVTELSKKLKKGEIKSEELVKSYIEQINKKDKQIEAWEFFEPDLAISQAKKLDADR 62 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES------TVTQKLWDNGA 116 G + DL GIP+GIKD F T+ + T LDG H ++ TV KL GA Sbjct: 63 QAGKVQGDLHGIPVGIKDIFDTEDMPT------LDGSEAHKKNPSLNDCTVVSKLKQAGA 116 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAAS 175 +++GK E A ++P ++ + D TPGGSS GS+AAVA + + Sbjct: 117 IIMGKTVTAELAH------------LTPGKTKNPHDPTRTPGGSSMGSAAAVAANMVPLA 164 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G+ T GS+ +PASF G VG KP+ G SR ++ + LDQ G+ + ++ D+A++ + + Sbjct: 165 VGSQTNGSVIRPASFCGVVGYKPSKGLISRHLVMQVSQVLDQIGVFSNSIEDAALISEQL 224 Query: 236 AGYDECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLS----PTIDKTWQQGIS 290 G+D+ D PD RA + + P E Y++ ++ ++ Sbjct: 225 FGHDKLD--------PDTTLRAKPKLLAASKEKPPMEPLFAYINLPFMNELEADAKEAFD 276 Query: 291 WLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 +KD +I ++ P +P ++ I A S++A+ V Y + K++L + Sbjct: 277 EVKDELKGQIKDVEFPKAFSEIPKWHKII---AESDMAKSFSVDYQ---KFKNLLS-DQI 329 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 +I GQ+ K + Y+ L+ ++ + + F D ILTP+ Sbjct: 330 VETIERGQKYK-----------ATEYNEACLKINEVTA-----YFDEFFHHYDAILTPSA 373 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 G+ + + G N +F G+P+IS+P + K+P+G+QL+ + Sbjct: 374 ------CGEAPKDLKTTG---NPIFCTIWTYCGMPSISLPLLQGKNKLPIGIQLVSSLYD 424 Query: 470 EETLF 474 +E LF Sbjct: 425 DERLF 429 >gi|302792549|ref|XP_002978040.1| hypothetical protein SELMODRAFT_108353 [Selaginella moellendorffii] gi|300154061|gb|EFJ20697.1| hypothetical protein SELMODRAFT_108353 [Selaginella moellendorffii] Length = 611 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 145/513 (28%), Positives = 235/513 (45%), Gaps = 65/513 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESD 60 F ++ + + RSK ++ ++ + +I+A+++S N M ++ + Q A S Sbjct: 112 FRFWSIRDYAEAYRSKKLTPTQVAERFIKAVDDSQRRNPPMAYFVSMDKQDLLKQAAAST 171 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVM 118 +R NG+ L+GI I IKD T S + R + +V +L GA+ Sbjct: 172 ERFANGNPISILDGIFIAIKDDIDCLPYETNGASVWVKKIRKTKDDSVCVSRLRKCGAIF 231 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK NM E MG++ ++G V +P+ ++T GGSS GSSA VA LC A++GT Sbjct: 232 PGKANMHEVGMGTTGNNPFFGTVRNPY----DVKRYT-GGSSSGSSALVASGLCPAALGT 286 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P+S G VG+K T GR + G + S+ G I + D I+ A+ G Sbjct: 287 DVGGSIRIPSSLCGIVGLKTTTGRTTCRGGLKGGWSMLCVGPIAANIEDLMIVYAAVLGS 346 Query: 239 DECDATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKD--- 294 E D P P + SI G + G ++ D L I K + + LK Sbjct: 347 HESDVLYSKPPPPCFPLLEKNSILGNLKFGKYSKWYYDVLDQEITKACDRTLDALKSEFG 406 Query: 295 ----------------------AGAKIVEISLPHTQYALPAYYIISPAEASSNLAR-YDG 331 + + VEI +P + A+ + +E ++L Y+ Sbjct: 407 TEARTTEFPLRLSQLVLVYAQTSTLQTVEIVIPELEELRAAHLVTCGSEIMTSLNHDYNY 466 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VR + E + L ++++ + +Y + S+C LR R + Sbjct: 467 VRKDISYEVRGTLAIFKHFNA--------------SYYIGSQC-----LRRRNMYY---- 503 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISV 448 + EAF++ VD+I+ PTTP +A + ++ + G + F N+ GLP +SV Sbjct: 504 -YMEAFKK-VDIIVVPTTPCTAPVIPQDSLSIGESDFVKVGTLMRFIATGNLLGLPCLSV 561 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 P E+ +P+GLQLIG+P++E TL VG I+ Sbjct: 562 PVGYDEQGLPIGLQLIGRPWQEATLLRVGFAIQ 594 >gi|228997173|ref|ZP_04156798.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus mycoides Rock3-17] gi|228762567|gb|EEM11489.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus mycoides Rock3-17] Length = 491 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 144/496 (29%), Positives = 228/496 (45%), Gaps = 54/496 (10%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + ++++ ELV Y+ I + ++N+ +E+ A +R I G L Sbjct: 22 MENGELTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEGLDHERKIKGVRGPLH 81 Query: 73 GIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD T +HT A + L+ +R ++++ + +KL + GAV+LGK NM E A G Sbjct: 82 GIPILLKDNIETNDSMHTSAGTIALENYRSNHDAFLVEKLREAGAVILGKANMTELANGM 141 Query: 132 SNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S E +S G VI+P+ S D D GGSS GS+ AVA L S+GT+T SI Sbjct: 142 SFEMWAGYSSRGGQVINPYGSGD--DDLFVGGSSTGSAVAVAANLTVLSVGTETDASILS 199 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VGIKPT G S GII F S D AG RTV D+AILL ++ G D+ D Sbjct: 200 PAVQNSVVGIKPTVGLVSCKGIIPFTYSQDTAGSFARTVTDAAILLGSLTGIDQLDPATY 259 Query: 247 N---LPVPDYERALDQS-IQGMTVGIPKEYRLDYLSP--TIDKTWQQGISWLKDAGAKIV 300 DY LD + ++ +G+ + Y ++ +Q I L++ GA ++ Sbjct: 260 KSEGRAQQDYMVYLDSNGLRSAKIGVFNKASESYYESGGYDEELFQNAIQVLRNEGATVL 319 Query: 301 E-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT--RSI 353 E I +P H +++ + +S E +L Y + + V +++ +N +++ Sbjct: 320 EDIEIPSFHREWS----WRVSSYELKHSLDNYLSKLPSNIPVHSISELIAFNKNIEEKAL 375 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS- 412 +GQ R+ G S+ + YL A+ D + EQG+D +L + Sbjct: 376 KYGQS---RLEFGK-DFSNTLRNPEYLNAK------LEDLYFSQEQGIDFVLKKYDLDAI 425 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP + + + AG P+I VPA + P G+ F E T Sbjct: 426 LFP---------------SYIGSTICAKAGYPSIVVPAGYMKSGRPFGITFASTAFSEGT 470 Query: 473 LFSVGQIIEKEAGYFR 488 L + E+ + R Sbjct: 471 LIKLAYAFEQATKHRR 486 >gi|107026032|ref|YP_623543.1| amidase [Burkholderia cenocepacia AU 1054] gi|116692783|ref|YP_838316.1| amidase [Burkholderia cenocepacia HI2424] gi|170737966|ref|YP_001779226.1| amidase [Burkholderia cenocepacia MC0-3] gi|105895406|gb|ABF78570.1| Amidase [Burkholderia cenocepacia AU 1054] gi|116650783|gb|ABK11423.1| Amidase [Burkholderia cenocepacia HI2424] gi|169820154|gb|ACA94736.1| Amidase [Burkholderia cenocepacia MC0-3] Length = 494 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 132/492 (26%), Positives = 215/492 (43%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +R+K +S VE + +Y+ IE N +NA + + + A A A E D + Sbjct: 22 LSAGELSSAIRTKAVSCVETMRAYLDHIERVNGAVNAIVALRDRDALLAEAAEKDAELAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ R L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYRGWLHGMPQAPKDLAMTKGLRTTYGSPIFRENVPQADSVGVARMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS YG +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F VG +P+ GR R G+ F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIVGFRPSQGRVPRWPGVDVFVQQLGIEGPMGRTVGDVAQLLAIQAGYDRNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT--IDKTWQQGISWLKDAGAKIVE 301 + + + LD ++G + ++ YL+ + + G++ L++ G + Sbjct: 257 LSLAEDPAVFAQPLDAELRGKRIAWVGDWN-GYLATEAGVLAQCEHGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APARIWRLWLTHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + ++ +F D I PT FP E+ Sbjct: 360 YEVEGLLALQGAVVFDASVERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVEQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P I+VP + +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVINVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + E+ A + Sbjct: 472 QLAHGYEQAADW 483 >gi|242240849|ref|YP_002989030.1| amidase [Dickeya dadantii Ech703] gi|242132906|gb|ACS87208.1| Amidase [Dickeya dadantii Ech703] Length = 447 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 151/305 (49%), Gaps = 23/305 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEES 59 M+E M+++ RL +SAVEL + I + + + +V A A S Sbjct: 1 MNEQTLMSLAT---RLAQGSLSAVELTREALARIADPAGEGARVFTQVYGAWALEQASVS 57 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAV 117 D+ ++ G R LEGIP+ +KD F G T A S +L D + V +L GAV Sbjct: 58 DRLLMQGAPRSALEGIPVSVKDLFDVSGEPTTAGSRVLRDVPAASGHAAVVARLLQAGAV 117 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK NM EFA +YG +PW D + PGGSS G++ +VA +C +IG Sbjct: 118 VLGKTNMTEFAYSGLGLNPHYGTPANPW---DRLTRRIPGGSSSGAAVSVADGMCYGAIG 174 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+R PA+F G VG KPT R R G++ + +LD G+I R V AG Sbjct: 175 SDTGGSVRIPAAFCGLVGFKPTAQRIDRAGVLPLSTALDSVGVIARDV----------AG 224 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D+ + P+ + L Q+ +P+ LD L ++ + + +S L AG Sbjct: 225 CVALDSVVAHQPLTLKPKRLAQA----RFVVPQTLVLDNLDDSVAAAFDRALSRLSAAGV 280 Query: 298 KIVEI 302 +IVE+ Sbjct: 281 EIVEL 285 >gi|66267665|dbj|BAD98531.1| amidase [Pseudomonas sp. K-9] Length = 504 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 20/422 (4%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ + L G + +KD A G+ + L+GF P +++TV +L D GA +LGK Sbjct: 79 EVMGASSGTLAGKTVALKDNIALAGVPMMNGAAPLEGFVPSFDATVVTRLLDAGATILGK 138 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + + + + TS PV +P R + SS GS+A VA ++G D G Sbjct: 139 ATCEHYCLSGGSHTSDPAPVHNPHRHGYAAGG-----SSSGSAALVAAGEVDIAVGGDQG 193 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P++F GT G+KPT+G GI++ ++D G IT VRD+A++L+A+AG D Sbjct: 194 GSIRIPSAFCGTYGMKPTHGLVPYTGIMAIEATIDHVGPITANVRDNALMLQAMAGSDGL 253 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V DY L + + G+ +G+ +E + L P + ++ I+ L+ GA++ Sbjct: 254 DPRQAEPQVDDYGSYLGRGVSGLRIGVVQEGFALANQDPRVADKVREAIAHLEALGAQVE 313 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIG--FGQ 357 +S+P A ++ I + + +G + + + +L+ R Sbjct: 314 PVSIPEHNLAGSLWHPIGCEGLTMQMMHGNGAGFNWKGLYDIGLLDKQAGWREQADQLSA 373 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +K + +G Y L + + +Y +A+ + ++ + +A D+++ PTTP +A P Sbjct: 374 SLKLCMFVGQYGL-THYHGRYYAKAQNLARFARQGYDKALHS-YDLLVMPTTPITAQPHP 431 Query: 416 ---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E + ++ I N T ++ G PA+S+P + MP+GL LI + + E T Sbjct: 432 PAHCSITEYVARALEMIGN---TAPQDITGHPAMSIPCGSVD-GMPVGLMLIARHYAEGT 487 Query: 473 LF 474 ++ Sbjct: 488 IY 489 >gi|257056109|ref|YP_003133941.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] gi|256585981|gb|ACU97114.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] Length = 490 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 154/505 (30%), Positives = 234/505 (46%), Gaps = 68/505 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSN----------SQMNAYIEVVAQKARAAA 56 + V E+ LRS D+SAVEL+D+ Q I N +NA+ + AR A Sbjct: 10 LGVREAATLLRSGDLSAVELLDACEQRIAERNGGPPTFDGASGAVNAWARLYPDLARQQA 69 Query: 57 EESDKRIIN--GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 +D+R+ +A L GIP+ +KD +A G A S +LDG P ++ST +L + Sbjct: 70 RAADERLRREGAEAPLLCGIPLALKDLYAVAGRPLTASSRVLDGHVPDHDSTAWVRLREA 129 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G V+LG + EFA G + + V +P ++D + SSGGSSAA+A + A Sbjct: 130 GMVLLGHTHTHEFAAGGTTDQ-----VGNP-HALDRSAGG----SSGGSSAALAAGMVPA 179 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK- 233 ++GTDT GS+R PA+ G IKPT+GR GII APSLD AG + R++ D A+LL+ Sbjct: 180 ALGTDTAGSLRIPAALAGVSSIKPTHGRVPLEGIIPLAPSLDHAGPMARSLADCALLLEA 239 Query: 234 --------AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW 285 + T + PVP +R L G+ V + + P I + Sbjct: 240 LAAGGAEVSPLLPPPAPLTGLTTPVPTTDRPL----AGVRVALTDRPDRVGVEPDIAEGL 295 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE 345 + D GA+++E+ PA A Y V + E Sbjct: 296 ARAAKACADLGAEVIEL----------------PAAADMVGEDYSIVLFS---------E 330 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS--HYLRARKIRTLIKRDFTEAF-EQGVD 402 + R G+E +R I +V +SR + S YL A++ + + F E +D Sbjct: 331 VAHYHRRF-TGREADYRTSIREFVETSRLFTSLEAYLEAQREFAQLTATWENWFAEHEID 389 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKK-MPL 459 VIL P++P +A P G +SG +G + + T N G P ++PA + +P+ Sbjct: 390 VILEPSSPCTAPPRGG-GYDSGRLGGEGDPLIRLTAIWNATGFPVAAIPAEPGTRSGLPV 448 Query: 460 GLQLIGQPFREETLFSVGQIIEKEA 484 GL LI E + VG I+++ A Sbjct: 449 GLSLIAPRGEEARVIRVGTILQEYA 473 >gi|269929194|ref|YP_003321515.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269788551|gb|ACZ40693.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 542 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 144/517 (27%), Positives = 231/517 (44%), Gaps = 46/517 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAE 57 ++ L + ++E + + + +AVELV++YI+ AI+ ++N+ +E+ A Sbjct: 41 LANLEEVTIAELQAAMEEGEFTAVELVNAYIERIEAIDQDGPRLNSILEINPDALDIAQA 100 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGA 116 ++R +G L GIPI +KD T + T A S L P ++ + Q+L D GA Sbjct: 101 LDEERRTSGARSPLHGIPILLKDNIDTADRMRTTAGSLALMNSTPARDAFIVQRLRDAGA 160 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V+LGK NM E+A S +S P GSS GS AA A L A SI Sbjct: 161 VILGKTNMSEWANFRSTRSSSGWSGRGGQCKNPYILDRNPCGSSSGSGAATAANLTAGSI 220 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+T GSI PA+ G VGIKPT G SR GII + + D G R V D+A +L A+ Sbjct: 221 GTETDGSIVCPATANGVVGIKPTVGLLSRSGIIPISHNQDTPGPHARVVADAAAILGAMV 280 Query: 237 GYDECD---ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 G D D A DY + LD +QG +G+ ++ Y S D+ ++Q I + Sbjct: 281 GVDPEDPATAPSEGRAYTDYTQFLDPNGLQGARIGVARQSVTGY-SEETDRLFEQAIQAM 339 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENT 350 +DAGA I++ + +P I+ + YD ++ L + ++ ++ Sbjct: 340 RDAGATIIDPA------DIPTINEITTGPTELTVLLYD-FKHDLNAYLAARNDPDIRTLA 392 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFE--------QGV 401 I F +E + + R + +L A++ L ++ EA E +G+ Sbjct: 393 DLIAFNEENAEQEL--------RWFGQELFLMAQEKGELTDPEYIEALETNHRLGRTEGI 444 Query: 402 DVILTP------TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 D +L PT + + N G + + +AG P ISVP Sbjct: 445 DAVLQAHQLDAIVAPTGSPAWTTDLVN----GDHFLGASSSPAAIAGYPLISVPMGFA-F 499 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P+ + +G + E TL + E+ RP ++ Sbjct: 500 GLPVNITFMGTAWSEPTLIRLAYAFEQATKVRRPPQF 536 >gi|183980958|ref|YP_001849249.1| peptide amidase, GatA_1 [Mycobacterium marinum M] gi|183174284|gb|ACC39394.1| peptide amidase, GatA_1 [Mycobacterium marinum M] Length = 500 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 157/517 (30%), Positives = 227/517 (43%), Gaps = 51/517 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59 EL ++E++ + +A L D Y I+ I+ S + + IEV A A AE Sbjct: 2 ELPEFTIAETQTAFERGEWTAAGLTDCYLRRIREIDQSGPMLRSIIEV-NPDALAIAEAL 60 Query: 60 DKRIINGDARD-LEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D G R L G+P+ IKD T + T A S L+G ++ V ++L D GAV Sbjct: 61 DAERSGGRIRGALHGVPVVIKDSIDTGDKMATTAGSLALEGNIATRDAFVVKQLRDAGAV 120 Query: 118 MLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +LGK NM E+ M S+ S + R+ D+ +P GSS GS+ AVA LC A++ Sbjct: 121 ILGKANMSEWGYMRSTRPCSGWSSRGGQVRNPYVLDR-SPLGSSSGSAVAVAANLCVAAL 179 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G + GSI +PAS VG+KPT G SR G+I A D G + RTV D A LL + Sbjct: 180 GAEVDGSIVRPASSNSIVGLKPTVGLLSRSGVIGVASPQDMVGPMARTVTDVATLLTVMT 239 Query: 237 GYDECDATCV---NLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 G D+ D T DY R LD ++QG +G+ +E R T D + + L Sbjct: 240 GVDDSDPTTRAGGAHTATDYRRFLDPAALQGARLGVARE-RFGAHEAT-DALIEGALGQL 297 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-- 350 GA+IV+ P +LP + + + RYGL+ L + Sbjct: 298 AALGAEIVD---PIQASSLPFFGDL----------ELELFRYGLKASLNGYLGAHPRAAV 344 Query: 351 ----RSIGFGQEVKHRIM--IGTYVLSSR-----CYDSHYLRAR-KIRTLIKRDFTEAF- 397 I F + ++M G L D YLR R ++R L D + Sbjct: 345 GSLDELIAFNRAHAGQVMPYFGQEFLEQSQAKGDLTDPQYLRVRAELRRLAGADGIDKAL 404 Query: 398 -EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-LCEK 455 E +D I+ PT + AF + + +I + +AG P I VPA C Sbjct: 405 REHRLDAIVAPTEGSPAFAIDPVVGD-----NILPGGCSTPPAVAGYPHICVPAGYFC-- 457 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P+GL L F+E L E+ G RP ++ Sbjct: 458 GLPVGLSLFAGAFQEPKLIGYAYAFEQATGVRRPPRF 494 >gi|225438343|ref|XP_002272907.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296082617|emb|CBI21622.3| unnamed protein product [Vitis vinifera] Length = 610 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 139/475 (29%), Positives = 228/475 (48%), Gaps = 41/475 (8%) Query: 18 SKDISAVELVDSYIQAI-ENSNSQ--MNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +++ + + +I A+ E+ N Q M+ +I + A ES R G+ L+G Sbjct: 146 SGEVTPRLVAERFIDAVRESCNPQLHMSFFINYDTEDILKQATESTLRYERGEPISVLDG 205 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI IKD T + L R ++ Q+L GA+++GK NM E G+S Sbjct: 206 VPIAIKDEIDCTPYPTTGGTTWLHKVRDCKNDACCVQRLRSCGAILVGKTNMHELGAGTS 265 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +P+ +T K T GGSS GS+A V+ LC A++G D GGS+R PA+ G Sbjct: 266 GINPHYGATRNPY----NTSKVT-GGSSSGSAAVVSAGLCPAALGVDGGGSVRMPAALCG 320 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPT+GR S G++ ++ GI+ TV D+ I+ AI+G + LP Sbjct: 321 VVGFKPTFGRVSHSGVLPLNWTVGMVGILASTVEDAFIVYAAISGETSSHQPTMLLPKVC 380 Query: 253 YERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYA 310 + SI + + E+ D S I Q + L + G + VE+++P + Sbjct: 381 FPLLKSTNSISNIKLAKYGEWFND-CSDDIKVCCSQALDKLHEHYGWETVEVTVPEIETM 439 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A+Y+ AE +++L+ L + +G+ V R+ G+ Sbjct: 440 RLAHYLTIGAECTTSLSS---------------LLQNVSIEELGWDTRVAFRVY-GS--- 480 Query: 371 SSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 +DS YL A++IR + + FE+ DVI+TPTT +A+ + + +G + +I Sbjct: 481 ----FDSMEYLNAQRIRNRQMQFHKKIFEKA-DVIVTPTTGATAYSIMNDALKTGELDYI 535 Query: 430 YNDVFT---VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 F +A N GLPA++VP + +P+GLQ IG+ + E TL + ++ Sbjct: 536 NGAAFVRYQIAGNFLGLPAVTVPIGYDKLGLPIGLQFIGRQWSEPTLIHIAHAMQ 590 >gi|242074936|ref|XP_002447404.1| hypothetical protein SORBIDRAFT_06g000410 [Sorghum bicolor] gi|241938587|gb|EES11732.1| hypothetical protein SORBIDRAFT_06g000410 [Sorghum bicolor] Length = 601 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 134/472 (28%), Positives = 218/472 (46%), Gaps = 40/472 (8%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKD 80 + E V + +Q N M + A + AE S KR G+ L+G+ + IKD Sbjct: 141 AVAEYVIAGVQEWNNKKPPMPMLVYFNADDLKKQAEASTKRFQQGNPISILDGVFVAIKD 200 Query: 81 CFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 T+ + D ++ +L G V +GK NM E +G + YG Sbjct: 201 DIDCFPYPTKGATTFFDQIHTVEKDAVCVARLRKCGVVFIGKANMHELGLGVTGNNPNYG 260 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +P S D++T GGSS G +A V+ LC+A+IGTD GGS+R P++ G VG K Sbjct: 261 TARNP----HSVDRYT-GGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSALCGIVGFKTN 315 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---LPVPDYERA 256 YGR G++ + +++ A + +V D+ ++ AIAG D + L VP+ Sbjct: 316 YGRTDMTGVLCDSGTVEVASPLASSVEDAILVYSAIAGSRPMDKLTLRPSPLCVPNLLSP 375 Query: 257 LDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAY 314 + +I G + +G E+ D I T + L G +I EI LP + A+ Sbjct: 376 ENSNILGSVKIGKYTEWFNDVCDHEISGTCDDALKLLCSTFGCQIEEIILPELEEMRTAH 435 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI-MIGTYVLSSR 373 + +E+ +L + Y+ R F + + + + G++ + Sbjct: 436 LVSIGSESFCDLNPH-----------------YKAGRKTEFTLDTRTSLALFGSFTATD- 477 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI---Y 430 Y+ ++ IR I EAF++ VDVI+TPTT +A + SG ++ Y Sbjct: 478 -----YVASQSIRRRIMHYHMEAFKK-VDVIVTPTTGITAPKIPPSALKSGESDYVVSAY 531 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 F +A N+ GLPAI+VP ++ +P+GLQLIG+P+ E +L V +E+ Sbjct: 532 LMRFIIAGNLLGLPAITVPVGHDKQGLPIGLQLIGRPWGEASLLRVASAVEE 583 >gi|289628895|ref|ZP_06461849.1| amidase [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 472 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 18/349 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S LDG+ P ++TV ++L GA ++GK ++ Sbjct: 133 LAGRTVVIKDNVSVAGVPMANGSLSLDGYVPSEDATVVKRLLAAGATVVGKSVCEDLCFS 192 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS G V +PW D T GGSS GS+ VA +IG D GGSIR P+++ Sbjct: 193 GASFTSATGAVKNPW---DLTRNA--GGSSSGSAVLVALQEVDMAIGGDQGGSIRMPSAW 247 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG KPTY G ++D G + VRD A++L IAG D D+ N P Sbjct: 248 SGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDVIAGADGLDSRQKNPPA 307 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLP-HT 307 LDQ + G+ +G+ +E + + +S P +D + ++ L+ GA + E S P H Sbjct: 308 VSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQLESLGATVGEASAPWHR 367 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQEVKH 361 AL + +I+ A+ + + +G YG+ V+G DI+ + R + V+ Sbjct: 368 GVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFGARRREHANALSSSVRA 425 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 + G Y L + + ++Y +AR + + R + EAF+ DV++ PT P Sbjct: 426 VALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLVLPTMP 472 >gi|327309778|ref|YP_004336676.1| Amidase [Pseudonocardia dioxanivorans CB1190] gi|326955113|gb|AEA28809.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 471 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 137/468 (29%), Positives = 223/468 (47%), Gaps = 50/468 (10%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 D + VE++ + I + +NA + V+A++A AAEE+ +R G R LEGIP G+K Sbjct: 21 DTNPVEVLAASRARIAAYDETLNAIVTVIAERADRAAEEAARRWAAGTPRPLEGIPFGVK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D F G T A S + +TV +++ GAV++ K EFA+G G Sbjct: 81 DVFDVSGERTTAGSRLHADRIATQTATVVRRVEAAGAVLVAKEGTTEFAIGGP-WNPLNG 139 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 PV +PW T +++ G SSG ++A A + SIG+D GGSIR P+++ G G+KPT Sbjct: 140 PVRNPW----DTARWSGGSSSGSAAALAARYY-PISIGSDAGGSIRIPSAWCGLTGLKPT 194 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 +G R G + +P+ + G ++R+ D+A L + I G D D + P P R Sbjct: 195 HGAVPRTGAVPLSPTTETVGPMSRSAADTARLFQIIRGQDRRDPR--SQPYPTQGRDAVW 252 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY---- 315 + +TVGIP + + + + + L+ AGA+ + LP + A Y Sbjct: 253 PPKNVTVGIPDTFFFEVCDDAVRAGYDAFVDVLRQAGAQTKHVRLPSAELAQTVGYQVLF 312 Query: 316 ---IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 ++ AE +S L YD V + R+ G +L+S Sbjct: 313 TEAAVTHAEHASRLKDYDPV--------------------------LVQRMHAG--LLTS 344 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIY- 430 + YLRA + R ++ + ++ F + VDVI P P++A L + N +G +Y Sbjct: 345 A---ADYLRALQFRHELQLELSDVF-RDVDVIALPAAPSTAPNLDELTVNINGRKFPLYE 400 Query: 431 -NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 T+ N++G+P + +P L E P +QL+ PFRE+ ++ Sbjct: 401 AQSRSTMLCNLSGVPGLVLPTGLDEGGCPTSVQLVAPPFREDVALTLA 448 >gi|302809326|ref|XP_002986356.1| hypothetical protein SELMODRAFT_123798 [Selaginella moellendorffii] gi|300145892|gb|EFJ12565.1| hypothetical protein SELMODRAFT_123798 [Selaginella moellendorffii] Length = 599 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 135/490 (27%), Positives = 227/490 (46%), Gaps = 43/490 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESD 60 F + + RS + +E+ + +IQA+E+S + M I A R A S Sbjct: 126 FKFWCIRDYAGAYRSGRTTPMEVAERFIQAVEDSERLSPPMAYMISFDASDIRKQAAASA 185 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 +R +G L+G+ I +KD ++ + L +R ++ +L + G + Sbjct: 186 ERFASGSPLSMLDGVLIVVKDDIDCLPHESRGGTQWLHKYREVKTDAACVARLRECGVIF 245 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK NM E MG++ Y G +P+ D+T GSS GS+A VA LC AS+GT Sbjct: 246 AGKTNMHELGMGTTGNNPYSGTARNPY---DTTRYAG--GSSSGSAAVVASGLCPASLGT 300 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P+ G VG+K T+GR + G++ +L+ G I V D+ I+ A+ G Sbjct: 301 DAGGSIRIPSGLCGLVGLKCTFGRITLSGLVPVGWTLEAVGPIAANVEDALIVYSAMIGS 360 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS-WLKDAGA 297 D P P S Q + +GI ++ D P + + + + + + Sbjct: 361 GPSDVVYSKPPPPCLPLFNHTSFQQLKLGIYTDWFTDVSPPEVATICRMAVDRFCERYSS 420 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 +I EI++P + + + + +E + L +Y+ +G+ Sbjct: 421 RINEIAIPELEELRNGHLVTTGSEICTCLN-----------------SIYK------YGK 457 Query: 358 EVKH--RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 H R++I + + S Y+ A+++R + E F + VDVI+TPTT +A Sbjct: 458 STCHETRVIIALF---KQFQSSLYVSAQRLRRRLMFYHMEIF-RTVDVIVTPTTGVTAPF 513 Query: 416 LGKEENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + + ++G H F V+ N GLPA+SVP ++ +P+GLQLIG+P++E T Sbjct: 514 IPPDAISTGETDLATHADLMRFIVSANFLGLPAVSVPVGHDKQGLPVGLQLIGKPWQEAT 573 Query: 473 LFSVGQIIEK 482 L + IE+ Sbjct: 574 LLRIAFAIEE 583 >gi|115358832|ref|YP_775970.1| amidase [Burkholderia ambifaria AMMD] gi|115284120|gb|ABI89636.1| Amidase [Burkholderia ambifaria AMMD] Length = 494 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 217/492 (44%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A E D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNALVSLRDRATLLAEAAEKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYHGWLHGMPQAPKDIAMTKGLRTTYGSPIFRDNVPQADSVGVGRMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS +G +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVHGATRNPYDLTKSA-----GGSSGGTAAALAARMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G++P+ GR R + F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGLRPSQGRVPRWPAVDVFMQQLGIEGPMGRTVGDVAHLLSIQAGYDPNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + +ALD+ ++G + ++ YL+ P + ++G++ L++ G + Sbjct: 257 LSLAEDPAVFTKALDKDLRGERIAWVGDWN-GYLATEPGVLAQCEKGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APERIWRLWLTHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + ++ +D+ R + ++ +F D I PT FP E+ Sbjct: 360 YEVEGLLAMQAADVFDASIERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVEQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P ISVP + +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYEQAADW 483 >gi|255955909|ref|XP_002568707.1| Pc21g17090 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590418|emb|CAP96606.1| Pc21g17090 [Penicillium chrysogenum Wisconsin 54-1255] Length = 533 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 133/437 (30%), Positives = 199/437 (45%), Gaps = 45/437 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ S I+ + P ++TV +L + GA + G + Sbjct: 101 LAGKSVSLKDVIAVAGVPQLLGSDIIPSWTPSTDATVVTRLLEAGADIYGTSTCENMCNS 160 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +S+ TS G V +P ++ GGS+ G +A VA + +IG D GGSIR PASF Sbjct: 161 TSSYTSAQGTVENPI-----AKGYSAGGSTSGGAALVAAGIVDITIGGDQGGSIRVPASF 215 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT+GR GI S D AG + RT ++A L I+GYD D + Sbjct: 216 CGCVGLKPTHGRVPFTGISSGDAMTDHAGPLARTTLEAATCLDVISGYDGIDDRALGGSK 275 Query: 251 PDYER---ALDQ---SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P R AL Q + G VGI E + + P + + K+ GA I E+S Sbjct: 276 PGSTRFAAALQQDHNQLDGFKVGIVVEGFDHSAVDPYVKGAVMTAVQKFKELGATIEEVS 335 Query: 304 LPHTQYALPAYYIISP--AEASSNLARYDGVRYGLRVEGKDILEMYENTR----SIGFGQ 357 LP + PA + I A A + L + G R G + EM E+ R GF + Sbjct: 336 LPEHLHG-PAIWTIQQRIAGAQTLLGQNTGRR------GLYMTEM-EHARLPWTDDGFQR 387 Query: 358 ---EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 K+ I+ G Y++ + Y + + + + FE+ D+++ PTTP A Sbjct: 388 AFPSTKNVIINGLYLMQR--FPGLYGKTANMGRFVSDKYEALFEK-YDILVMPTTPVVAP 444 Query: 415 PLGKEE----NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLI 464 GK E + SMG N T N+ G PA+S+P K +P+G+Q++ Sbjct: 445 RHGKRELPLDSLRPSMGLTIN---TAVFNVTGHPALSIPVGFAPAKEDNQVMLPVGMQIV 501 Query: 465 GQPFREETLFSVGQIIE 481 G ++EE + G E Sbjct: 502 GGLWQEEKILRAGHAWE 518 >gi|303274108|ref|XP_003056378.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462462|gb|EEH59754.1| predicted protein [Micromonas pusilla CCMP1545] Length = 269 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/217 (41%), Positives = 132/217 (60%), Gaps = 6/217 (2%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R +++S E+V +Y++ I +++ ++ + A A AE D +G D L G+ Sbjct: 58 IRKQNVSVKEIVHAYVEKILATDTTTQSFTSLTADSALQQAEYLDSLFASGLDPGPLAGV 117 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P IKD G T A S +L+ +P Y++ V L +GA+++GK NMDEF MGS+ E Sbjct: 118 PFAIKDNICYSGSATTAGSKLLEKHQPAYDAHVLSALRASGALIIGKTNMDEFGMGSTTE 177 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S + ++PW D T PGGSSGGS+AAV CA ++G+DTGGSIRQPASF G V Sbjct: 178 NSAFQLTLNPW---DLTK--VPGGSSGGSAAAVVMQQCALALGSDTGGSIRQPASFCGVV 232 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G+KPTYG SR G+I++A S D G ++ +V SA+ Sbjct: 233 GLKPTYGLLSRHGLIAYASSFDSIGPLSSSVEVSALF 269 >gi|302814055|ref|XP_002988712.1| hypothetical protein SELMODRAFT_184096 [Selaginella moellendorffii] gi|300143533|gb|EFJ10223.1| hypothetical protein SELMODRAFT_184096 [Selaginella moellendorffii] Length = 599 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 135/490 (27%), Positives = 227/490 (46%), Gaps = 43/490 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESD 60 F + + RS + +E+ + +IQA+E+S + M I A R A S Sbjct: 126 FKFWCIRDYAGAYRSGRTTPMEVAERFIQAVEDSERLSPPMAYMISFDASDIRKQAAASA 185 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 +R +G L+G+ I +KD ++ + L +R ++ +L + G + Sbjct: 186 ERFASGSPLSMLDGVLIVVKDDIDCLPHESRGGTQWLHKYREVKTDAACVARLRECGVIF 245 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK NM E MG++ Y G +P+ D+T GSS GS+A VA LC AS+GT Sbjct: 246 AGKTNMHELGMGTTGNNPYSGTARNPY---DTTRYAG--GSSSGSAAVVASGLCPASLGT 300 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P+ G VG+K T+GR + G++ +L+ G I V D+ I+ A+ G Sbjct: 301 DAGGSIRIPSGLCGLVGLKCTFGRITLSGLVPVGWTLEAVGPIAANVEDALIVYSAMIGS 360 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS-WLKDAGA 297 D P P S Q + +GI ++ D P + + + + + + Sbjct: 361 GPSDVVYSKPPPPCLPLFNHTSFQQLKLGIYTDWFTDVSPPEVATICRMAVDRFCERYSS 420 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 +I EI++P + + + + +E + L +Y+ +G+ Sbjct: 421 RINEIAIPELEELRNGHLVTTGSEICTCLN-----------------SIYK------YGK 457 Query: 358 EVKH--RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 H R++I + + S Y+ A+++R + E F + VDVI+TPTT +A Sbjct: 458 STCHETRVIIALF---KQFQSSLYVSAQRLRRRLMFYHMEIF-RTVDVIVTPTTGVTAPF 513 Query: 416 LGKEENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + + ++G H F V+ N GLPA+SVP ++ +P+GLQLIG+P++E T Sbjct: 514 IPADAISTGETDLATHADLMRFIVSANFLGLPAVSVPVGHDKQGLPVGLQLIGKPWQEAT 573 Query: 473 LFSVGQIIEK 482 L + IE+ Sbjct: 574 LLRIAFAIEE 583 >gi|156089387|ref|XP_001612100.1| amidase family protein [Babesia bovis] gi|154799354|gb|EDO08532.1| amidase family protein [Babesia bovis] Length = 591 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 122/443 (27%), Positives = 199/443 (44%), Gaps = 53/443 (11%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D+ L G PI +KD A + + S++L G+ P Y + + L +GA+++GK MDE Sbjct: 180 DSMLLFGEPIVVKDNLAIRDVPYSNGSNLLQGYAPSYTARAVELLQHHGALLIGKTAMDE 239 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F +G+S + + ++P+ S K GGSSGGS+ AVAG + +IGTDTGGSIR Sbjct: 240 FGVGASTDAA-----LNPYSS-----KHVAGGSSGGSATAVAGGIVNIAIGTDTGGSIRL 289 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA++ G +G +P+YG SR G+ A D GI TR V D L I DE C Sbjct: 290 PAAYCGCIGYRPSYGLISRQGLSELAGRFDTVGICTRNVDDCIKTLLCI--IDEITQDCT 347 Query: 247 N--------LPVPDYERALDQSIQGMTVGIPKEYRLD--YLSPTIDKTWQQGISWLKDAG 296 + L + D Q + E + L P + ++ L G Sbjct: 348 DSKASSKVILDLKSMLHNKDTLKQLKVASLDTEILVSKGLLDPEMADNIRKVELNLSKLG 407 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDIL-EMYENTRS 352 +V++ P +Y+I A+ +SNL R+ ++Y + + +D++ +MY +TR+ Sbjct: 408 VNVVKVPPPELAKIARSYHIYVAAQMASNLQRFADMQYHTQQQHMSTEDMMSQMYPDTRA 467 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ------GVDVILT 406 R+ G +L + YD + RD+ + + ++L+ Sbjct: 468 ---------RMQGGVDILQ-QGYDHENIFKET------RDYIHGWMNKHSIFTDLSIMLS 511 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PT+ A PL ++ I D++T G AI++P + + +PL Q Sbjct: 512 PTSAHQA-PLKRKTQRDC----IKEDLYTTLAPFIGACAIAIPTGMGKDGLPLSAQFTSA 566 Query: 467 PFREETLFSVGQIIEKEAGYFRP 489 F++ L + AG P Sbjct: 567 RFQDALLLEAARAYLDHAGNLIP 589 >gi|302766559|ref|XP_002966700.1| hypothetical protein SELMODRAFT_439658 [Selaginella moellendorffii] gi|300166120|gb|EFJ32727.1| hypothetical protein SELMODRAFT_439658 [Selaginella moellendorffii] Length = 625 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 144/514 (28%), Positives = 236/514 (45%), Gaps = 65/514 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESD 60 F ++ + + RSK ++ ++ + +I+A+++S N M ++ + Q A S Sbjct: 119 FRFWSIRDYAEAYRSKKLTPTQVAERFIKAVDDSQRRNPPMAYFVSMDKQDLLKQAAAST 178 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVM 118 +R NG+ L+GI I IKD T S + R + +V +L GA+ Sbjct: 179 ERFANGNPISILDGIFIAIKDDIDCLPYETNGASVWVKKIRKTKDDSVCVSRLRKCGAIF 238 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK NM E MG++ ++G V +P+ ++T GGSS GSSA VA LC A++GT Sbjct: 239 PGKANMHEAGMGTTGNNPFFGTVRNPY----DVKRYT-GGSSSGSSALVASGLCPAALGT 293 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P+S G VG+K T GR + G + S+ G I + D I+ A+ G Sbjct: 294 DVGGSIRIPSSLCGIVGLKTTTGRTTCRGGLKGGWSMLCVGPIAANIEDLMIVYAAVLGS 353 Query: 239 DECDATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKD--- 294 E D P P + SI G + G ++ D L I K + + LK Sbjct: 354 HESDVLYSKPPPPCFPLLEKNSILGNLKFGKYSKWYYDVLDQEITKACDRTLDALKSEFG 413 Query: 295 ----------------------AGAKIVEISLPHTQYALPAYYIISPAEASSNLAR-YDG 331 + + VEI +P + A+ + +E ++L Y+ Sbjct: 414 TEARTKEFPLRLSQLVLVYAQTSTLQTVEIVIPELEELRAAHLVTCGSEIMTSLNHDYNY 473 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 VR + E + L ++++ + +Y + S+C LR R + Sbjct: 474 VRKDISYEVRGTLAIFKHFNA--------------SYYIGSQC-----LRRRNMYY---- 510 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISV 448 + EAF++ VD+I+ PTTP +A + ++ + G + F N+ GLP +SV Sbjct: 511 -YMEAFKK-VDIIVVPTTPCTAPVIPQDSLSIGESDFVKAGTLMRFIATGNLLGLPCLSV 568 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 P ++ +P+GLQLIG+P++E TL VG I++ Sbjct: 569 PVGYDDQGLPIGLQLIGRPWQEATLLRVGFAIQE 602 >gi|223938186|ref|ZP_03630083.1| Amidase [bacterium Ellin514] gi|223893230|gb|EEF59694.1| Amidase [bacterium Ellin514] Length = 559 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 164/526 (31%), Positives = 246/526 (46%), Gaps = 70/526 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59 EL+ + + E + + SAV L Y IQ I+ ++NA IE+ + A+ Sbjct: 62 ELDEVMIGELQSGMAKGKWSAVSLTKKYLTRIQMIDRRGPKLNAVIELNPEALAIASALD 121 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +R G L GIP+ IKD T + T A S L G ++ + QKL + GAV+ Sbjct: 122 KERKSKGPRGPLHGIPVLIKDNIDTHDKMMTTAGSLALAGSIAPKDAFMVQKLREAGAVI 181 Query: 119 LGKLNMDEFA-MGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 LGK N+ E+A SS+ TS + G + P+ ++D P GSS GS AVA LCA Sbjct: 182 LGKTNLSEWANFRSSHATSGWSGRGGLTLCPY-ALDRN----PSGSSSGSGVAVAANLCA 236 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GT+T GS+ PAS+ G VGIKPT G SR GII A S D AG + RTV D+AILL Sbjct: 237 VAVGTETDGSVLSPASYNGLVGIKPTVGLISRCGIIPIAHSQDTAGPMARTVTDAAILLG 296 Query: 234 AIAGYDECDATCVNLP---VPDYERALDQ-SIQGMTVGIPKEYR--LDYLSPTIDKTWQQ 287 +AG D CDA DY + L + ++G +G+ +++ LD DK + Sbjct: 297 CLAGPDNCDAATAESAGKVQTDYTQFLKRDGLRGARIGVARKFFGILD----EADKLMEG 352 Query: 288 GISWLKDAGAKIVE-ISLP-HTQYALPAYYIISPAEASSNLARYDGVR------YGLRVE 339 I+ +K GA IV+ LP H QY ++ E ++L Y R + L Sbjct: 353 AIAEMKALGAVIVDPADLPTHGQYGEAETEVLL-YEFKNDLNAYLANRGANAPVHSL--- 408 Query: 340 GKDILEMYENTRSIG---FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 K+I+E E ++ FGQ+ L + L + R ++++ Sbjct: 409 -KEIIEFNERNKAKEMPYFGQD-----------LFLKAEAKGPLTEKAYRDALEKNLRLT 456 Query: 397 FEQGV---------DVILTPTT-PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 E+G+ D I+ PTT PT L + ++G T +AG P+I Sbjct: 457 REEGIDAVMKKHRLDAIVAPTTGPTQLTDLVWGDRDTGGS--------TTPPAVAGYPSI 508 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +VPA +P+G+ G+ + E L + E+ + R K+ Sbjct: 509 TVPAGQV-AGLPVGISFFGKAWSEPKLIELAFAFEQSTKHRRAPKF 553 >gi|296115165|ref|ZP_06833806.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter hansenii ATCC 23769] gi|295978266|gb|EFG85003.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter hansenii ATCC 23769] Length = 460 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 146/484 (30%), Positives = 219/484 (45%), Gaps = 67/484 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R+ SAV ++ I IE +++ N+ + A A AE D+RI G D L G+ Sbjct: 25 VRAGRRSAVSVITGVIADIEARDTRFNSVTRIFGPAAVARAEHIDQRIARGEDPGMLAGV 84 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P G+KD F G T A S +L G P E +TV +L GAV + LNMDEFA G S Sbjct: 85 PFGVKDLFDIAGEVTTAGSLVLRGNPPAQEDATVVARLQAQGAVAVASLNMDEFAYGFST 144 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E ++ G +P + SSGGS+AAVA + ++G+DT GSIR PA+ G Sbjct: 145 ENAHTGTTRNPHDTACLAGG-----SSGGSAAAVAAGIMPFALGSDTNGSIRLPAALCGV 199 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPT+GR R G FA SLD G + TV D L A+ G + +PD Sbjct: 200 WGLKPTFGRIPRKGAYPFAASLDVVGPMADTVED----LHAVFGIMDGRKPEA---LPDV 252 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + G + + ID + I + + LP A A Sbjct: 253 ASLRIARLGG------------WFARNIDAGFVAAIDDVMRHLNSTTVVELPEVARARAA 300 Query: 314 YYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 ++I+ AE S +L R R++ + + R+M G + S Sbjct: 301 SFLITAAEGGSLHLGRL-------------------RQRAMQYDPATRGRLMAGAMLPS- 340 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL--------GKEENNSG 424 + ++A++ R+ + E F DV++ P T A + G+ + Sbjct: 341 ----ATLVQAQRFRSWFRARIHELFSHH-DVVVAPATVGPAPRIDQPTIMVEGRVVSARA 395 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ++G +FT +++AG+P +S P A C +PLGLQLIG P E LF+V +++ A Sbjct: 396 NLG-----LFTQPISLAGVPVLSAPLA-CPSGLPLGLQLIGAPGAEAALFAVAGELQR-A 448 Query: 485 GYFR 488 G R Sbjct: 449 GLAR 452 >gi|86136426|ref|ZP_01055005.1| amidase [Roseobacter sp. MED193] gi|85827300|gb|EAQ47496.1| amidase [Roseobacter sp. MED193] Length = 785 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 115/424 (27%), Positives = 200/424 (47%), Gaps = 19/424 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I +KD G+ S I++G+ P ++T+ ++ D GAV+ GK + + F + Sbjct: 370 LRGKRIALKDTVCLAGVPMMNGSSIMEGYTPEIDATIVTRMLDAGAVITGKAHCENFCLS 429 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T+ GPV +PW+ F GGSSGGS+A VA +I D GGSIR P+S Sbjct: 430 GGSHTNAKGPVHNPWKH-----GFMAGGSSGGSAALVAAGEVDMAIAGDQGGSIRIPSSN 484 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G G++ ++D G +T V D+A+LL+ +AG D D Sbjct: 485 CGVYGMKPTHGLVPYTGVMPVEQTIDHVGPVTNCVADNALLLEVLAGEDGLDPRQYAPQT 544 Query: 251 PDYERALDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y AL + G+ +G+ KE +R + P +D ++ GA++ E+S+P Sbjct: 545 FRYTEALGRGAHGLRIGVLKEGIHRPES-DPDVDHKVLAAAERFRELGARVEEVSIPEHH 603 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRSIGFGQEVKHRI 363 A+ + I+ ++ G G G + M ++ +R+ +K + Sbjct: 604 LAVDCWTAITVEGLQDHMMH--GNSAGTNYRGLFLPSMIDHMAQWRSRADELSHSLKVCM 661 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN- 422 +G + + Y +A+ + + + + +AF Q D++L PT P P+ + + Sbjct: 662 FLGEF-FQEQYRGRFYGKAQNLMRRVNQKYAQAFGQ-YDLLLMPTVPMKPQPIPPADCSI 719 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 S + + + A GLPA++VP L E +P+G+ L+G F E ++ E+ Sbjct: 720 SLYVQRAFEMIGNTAPFNGGLPAMNVPCGLSE-GLPIGMMLVGPKFGELKIYQAAHAFEQ 778 Query: 483 EAGY 486 + Sbjct: 779 SGDW 782 >gi|170728363|ref|YP_001762389.1| amidase [Shewanella woodyi ATCC 51908] gi|169813710|gb|ACA88294.1| Amidase [Shewanella woodyi ATCC 51908] Length = 504 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 125/503 (24%), Positives = 225/503 (44%), Gaps = 26/503 (5%) Query: 1 MSELNFMAVSESRD----------RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ 50 ++ELN +A S D L +++A EL+DS + + E + Sbjct: 8 ITELNLIAKSLCMDLSDSDLELHLSLLQPNLAAYELIDSLPDNVPFVTHPRTSGYEPDLE 67 Query: 51 KARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK 110 + A I + L G + +KD G+ + L G+ P Y++TV + Sbjct: 68 QNELNAWHRKVSIKGEKSGLLAGYKVVLKDNIFLAGVPMNNGASTLQGYIPEYDATVVSR 127 Query: 111 LWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 + + G ++GK + + F + + T+ V +P+ + S+ SS G A V Sbjct: 128 ILNAGGEIVGKAHCEYFCLSGGSHTNSKHSVKNPYNPLHSSGG-----SSSGCGALVGAG 182 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 +IG D GGSIR PAS++G VG+KPT+G GI+ ++D AG IT V ++A Sbjct: 183 EVEMAIGCDQGGSIRIPASWSGCVGMKPTWGLVPYSGIMPIENTIDNAGPITNNVENNAK 242 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGI 289 LL+AIAG+D D V DY +L +I + +GI + + +DK I Sbjct: 243 LLQAIAGHDGLDPRQYRQGVDDYLTSLKSNINDLKIGILTDGFNRPESEEDVDKAVLDAI 302 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYE 348 L GA I E+S P + ++ + + +G+ G + + +++ + Sbjct: 303 QVLSKLGASIDEVSTPWHNIGQSIWLAVALEGLTDQMMLGNGMGRGWKGLHSTSLIDRHS 362 Query: 349 N--TRSIGFGQEVKHRIMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVIL 405 + R+ +K ++ G Y+L Y+ H Y +A+ + + ++ + D+++ Sbjct: 363 SWRMRANELPNNLKSCLLTGQYMLEK--YNGHFYAKAQNLSRRLTDEYDKLLSH-FDILI 419 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQL 463 PTTP A P+ +++ ++ T + G PA+S+P + +P+G+ L Sbjct: 420 MPTTPMKATPIPTADDDEALHVQRAFEMIGNTSPFDTTGHPALSIPCGI-RNGLPVGMML 478 Query: 464 IGQPFREETLFSVGQIIEKEAGY 486 +G F E TL+ Q E+ + Sbjct: 479 VGNHFDEATLYRAAQAYEQSTDW 501 >gi|42781209|ref|NP_978456.1| amidase [Bacillus cereus ATCC 10987] gi|42737131|gb|AAS41064.1| amidase family protein [Bacillus cereus ATCC 10987] Length = 491 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 147/501 (29%), Positives = 229/501 (45%), Gaps = 58/501 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQRAMEDGKLTSKELVMYYLHRIAKYDQDGPEINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVISVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY + LD + G +G+ PK+Y Y S D+ +++ Sbjct: 251 IDEKDVATRKSEGIAEHDYTKYLDVNGLNGTKIGVYNNAPKDY---YKSGEYDENLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I++P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSKGATVVEDINIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALRYGQTKLER----RKDFPNTLRNPQYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 D L K+ N + Y + + AG P+I++PA + P G+ Sbjct: 414 DFAL------------KKYNLDAILFPSY--IGSTICAKAGYPSIAIPAGYMDNGRPFGI 459 Query: 462 QLIGQPFREETLFSVGQIIEK 482 L FRE TL + E+ Sbjct: 460 TLASTAFREGTLIKLAYAFEQ 480 >gi|300311728|ref|YP_003775820.1| indole acetamide hydrolase [Herbaspirillum seropedicae SmR1] gi|300074513|gb|ADJ63912.1| indole acetamide hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 468 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 147/493 (29%), Positives = 227/493 (46%), Gaps = 54/493 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L M + E R L + S +E VD+ I E + +N Y++ ++ R+ A D++ Sbjct: 2 DLVDMTLIEVRQGLSDRRFSCLEYVDALIAETE-AQWDLNCYLQRDPEQLRSQARMLDEQ 60 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIPI IKD GI + A + L P +TV + L+ GA+ GK Sbjct: 61 ---GGHGPLSGIPIAIKDNIDVAGIASTAGTAALRNNVPQRHATVVEYLFGAGALHAGKA 117 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NM E A G +N +GP +P+ + + GGSSGG A +A L A++GTDTGG Sbjct: 118 NMHELAFGITNNNGVFGPCRNPYDA-----ELIAGGSSGGCGALLAARLAPAAVGTDTGG 172 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA+ G VG++PT R S+ G++ + + D G + R+V D A+L + +AG + Sbjct: 173 SVRIPAALCGVVGLRPTSRRYSQHGVVPISHTRDTPGPMARSVADVALLDQIMAGSRDS- 231 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 A + LP P R +G+ + L ++ + L++AG ++V++ Sbjct: 232 APLLALP-PSQLR----------LGVLRNPSWQGLEEEVEANANAALMQLREAGVELVDV 280 Query: 303 SLP------HTQ---YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 LP H L + I PA ++ AR R V D+ + + T Sbjct: 281 DLPTLAPLSHAAGFAIVLHEFLIDLPAYLQASDARDVIKRVLAEVGSPDVARIIQAT--- 337 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Q V Y L+ L R+ + RD + QGVD ++ PTT +A Sbjct: 338 -LDQPVPEH----AYRLA--------LEQRRTMQALYRDCFRS--QGVDALIFPTTALTA 382 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVN-----MAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PLG E++ G A N +AGLP+IS+P L E +P+GL+L G Sbjct: 383 RPLG-EDDTVALRGERVPTFPAFARNADGASIAGLPSISIPVGLSEYGLPVGLELDGPEG 441 Query: 469 REETLFSVGQIIE 481 + L V +E Sbjct: 442 SDRRLLQVAASLE 454 >gi|326515320|dbj|BAK03573.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 503 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 146/506 (28%), Positives = 232/506 (45%), Gaps = 98/506 (19%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRIINGDARDLEGIPI 76 +++VELV Y+ I N ++A IEV + Q ARA AE S R G L G+P+ Sbjct: 40 VTSVELVRFYLDRIRRLNPLLHAVIEVNPDALRQAARADAERSSGRRATGV---LHGVPV 96 Query: 77 GIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD AT+ ++T A S L G ++ V ++L GAV+LGK NMDE+A N Sbjct: 97 LLKDNIATRDALNTTAGSFALLGSVVRRDAGVVRRLRRAGAVVLGKANMDEWA----NFR 152 Query: 136 SYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S+ G W + + TP GSS GS+ A A + A ++GT+T GSI PAS Sbjct: 153 SFSG---GGWSARGGKGRNPYVLSATPCGSSTGSAIAAATSMAAVTLGTETDGSILCPAS 209 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-- 247 VGIKPT G SR G++ P D G I RTV D+ +L AI GYD DA Sbjct: 210 LNSVVGIKPTVGLTSRAGVVPITPRQDTVGPICRTVADAVHVLDAIVGYDAVDAPATMAA 269 Query: 248 ---LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVE- 301 +P Y + L + ++G +G+P + ++L+ T+ + ++Q ++ ++ GA ++E Sbjct: 270 SKYIPNGGYMQFLKKDGLRGKRIGVPNGF-FNFLNGTVQQMVYEQHLNTMRKQGAILIEN 328 Query: 302 ------------------ISLP-HTQYALPAY---YIISPAEASSNLARYDG---VRYGL 336 ++LP + +L +Y + SP + +++ ++ V + Sbjct: 329 LDIENLSVLLDFVNNGQMVALPAEFKLSLNSYLSNLLHSPVRSLADIIAFNNAHPVEEKM 388 Query: 337 RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 + G+ + + ENT IG + + + L A ++ L++ Sbjct: 389 KEIGQAVFLVAENTTGIGASER-------------AAISQLNKLSANGLKKLMR------ 429 Query: 397 FEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK 456 E +D I+TP NN+ S VF + G+PAI+VPA + Sbjct: 430 -EHELDAIVTP-------------NNAAS------SVFAI----DGMPAITVPAGYGRQG 465 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEK 482 +P GL G E L + E+ Sbjct: 466 VPFGLCFGGLRGYEPRLIEMAYAFEQ 491 >gi|222081841|ref|YP_002541206.1| amidase [Agrobacterium radiobacter K84] gi|221726520|gb|ACM29609.1| amidase protein [Agrobacterium radiobacter K84] Length = 504 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 120/425 (28%), Positives = 210/425 (49%), Gaps = 20/425 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD A G+ S L+GF P ++T+ ++ D GA ++GK + F + Sbjct: 88 LKGRTVALKDNVALAGVPMMNGSTTLEGFVPAADATIVTRMLDAGATIVGKAVCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +P R ++ GGSS GS+A VA +IG D GGSIR PAS+ Sbjct: 148 GGSHTSDPGPVHNPHRM-----GYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPASY 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+K T+G G++ ++D G +T TV D+A+LL+ +AG D D V Sbjct: 203 CGIYGMKATHGLVPYTGVMPIESTIDHTGPMTATVADNALLLEVLAGADGFDPRQYAPKV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL +S++G+ +G+ KE + + + + + G L GA+I E+S+P Sbjct: 263 SSYTEALGKSVRGLKIGLLKEGFAVANMQEAVADKVRAGAERLAGLGAEISEVSIPDHLN 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN--TRSIGFGQEVKHRIMIG 366 AL A+ I+ + +G+ + + + +L+ + + R+ + +K +++G Sbjct: 323 ALAAWNPITLEGFMVQMMHGNGMGFNWKGLYDVGLLDAHSSWRNRADDLSKTLKLCMLVG 382 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + L + +Y ++R I K + F + D++L PT P A L +++ + Sbjct: 383 QWGL-THYRGRYYAKSRNIAIAAKAAYDLVFGE-YDLLLMPTLPCVATKLPEKD---APL 437 Query: 427 GHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I F T ++ G PA+S+P L + +P+GL LI + + E T++ E Sbjct: 438 SEIIERAFEMTASTSPFDVTGHPAMSLPCGLVD-GLPVGLMLIAKDYDESTIYRAASAFE 496 Query: 482 KEAGY 486 + + Sbjct: 497 ADGDW 501 >gi|310801067|gb|EFQ35960.1| amidase [Glomerella graminicola M1.001] Length = 575 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 128/424 (30%), Positives = 200/424 (47%), Gaps = 27/424 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KDC A + S + P ++TV ++ D GA +LG + F Sbjct: 105 LKGRTVCLKDCIAVASVPQFFGSDAFPPWTPSTDATVVTRVLDAGADILGTATCEHFCNS 164 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +++ TS G + +P ++ GGS+ G +A V ++GTD GGSIR PA+F Sbjct: 165 TASFTSAQGTIENP-----HGQGYSAGGSTSGGAALVGSGKIDIALGTDQGGSIRVPAAF 219 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT+G GI S P D AG + RTV + A L I+GYD D + Sbjct: 220 CGCVGLKPTHGLVPFTGITSGDPIDDHAGPLCRTVMEVAQCLDTISGYDGIDDKSLGAAA 279 Query: 251 P---DYERALDQS---IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 D+ +L S +QG+ +G+ KE + + + P + L+ GA I E+S Sbjct: 280 HGCYDFCASLQSSSGRLQGVKIGLLKEGFNQEIIEPRVRDHVIAAARKLESLGATIDEVS 339 Query: 304 LPHTQYALPAYYIISPAEASSN--LARYDGVRYGLRVEGKDILEM-YENTRSIGFGQEVK 360 +P P+ + I A S+ L R G R GL + D + + N+ K Sbjct: 340 VP-LHLEGPSIWTIQQRIAGSSGILGRTSG-RRGLGLTEFDKARLPWSNSSFQKLFPSTK 397 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + ++ G Y+ S + S Y + I I+ + + FE DVI+ PTTP A G E Sbjct: 398 NTVINGLYL--SEKFPSLYSKTVNIGRQIRDAYEKVFET-YDVIIMPTTPFVAPRHGSRE 454 Query: 421 NNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKK------MPLGLQLIGQPFREETL 473 + GS AV N+ G PA+S+P K MP+G+Q+IG ++++ + Sbjct: 455 SVLGSFEPTIGLTTNTAVFNVTGHPAMSIPVGFLPAKDDGQVLMPVGMQVIGGLWQDKKV 514 Query: 474 FSVG 477 +VG Sbjct: 515 LNVG 518 >gi|296269409|ref|YP_003652041.1| amidase [Thermobispora bispora DSM 43833] gi|296092196|gb|ADG88148.1| Amidase [Thermobispora bispora DSM 43833] Length = 466 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 131/495 (26%), Positives = 217/495 (43%), Gaps = 44/495 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL + +E + LR+ +SAVEL ++ ++ IE N +NA + VVA A A ++D Sbjct: 1 MSELYDLTATEMSELLRAGKVSAVELTEACLRRIEEVNGPVNAIVTVVADHALEQARQAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G R L GIP+ KD T GI T S + P + + +++ G + + Sbjct: 61 ADLAQGRIRGPLHGIPVAHKDLADTAGIRTTYGSRVFADHVPEADDPMVRRIKAAGGITI 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF GS +G +P+ S SSGG++AA+A + + G+D Sbjct: 121 GKTNTPEFGTGSHTVNEVFGATRNPYDLSKSAGG-----SSGGAAAALACRMVPLADGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PASF G++PT GR + +L G + RTV D A+ + A+AG+D Sbjct: 176 MGGSLRNPASFCNVTGLRPTPGRVPSRSATAAWFTLSVPGPMARTVADLALFMSAMAGFD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + + L++ G + + + P + + +S L GA + Sbjct: 236 PVSPYSIKEDPAVFAAPLERDFTGARIAFSPDLGGLPVDPETARVTAEAVSVLTGLGATV 295 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ L +S AE + + Y G Y L D G G V Sbjct: 296 EQVDLD-----------LSDAEDAFRI--YRGWFYALNYGDLD-----------GVGPNV 331 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + G V + + RA ++RT + E F + D ++ P + FP+ Sbjct: 332 AWNVEQGKKVTA-----ADLARAERLRTGLYHRMREFFGR-YDFLIAPVSQVPPFPVDHP 385 Query: 420 ---ENNSGSMGHIY---NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 E N M + ++V A PA+SVP +P+G+Q++G+P+ + + Sbjct: 386 YVTEINGQPMPDYLAWMRSCYWISVLHA--PAMSVPCGFTADGLPVGVQIVGRPWDDFGV 443 Query: 474 FSVGQIIEKEAGYFR 488 +G E+ G++R Sbjct: 444 LQLGHAFEQATGHWR 458 >gi|293603163|ref|ZP_06685596.1| indole acetamide hydrolase [Achromobacter piechaudii ATCC 43553] gi|292818394|gb|EFF77442.1| indole acetamide hydrolase [Achromobacter piechaudii ATCC 43553] Length = 497 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 139/516 (26%), Positives = 235/516 (45%), Gaps = 72/516 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L + V+++ +++ + +++ L + + I+ +++ +NA+I V + A A A D Sbjct: 21 AALTDLTVAQAAEQIHAGRVTSEALTQACLDRID-AHAALNAFITVDREGALAQARAFDA 79 Query: 62 RI--INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G + L G+PI IKD G+ A + L FRP ++ V Q+L + GAV++ Sbjct: 80 RPGKAGGMSLPLGGVPIAIKDNIHVAGLPNTAGTPALKSFRPAQDAPVVQRLREAGAVIV 139 Query: 120 GKLNMDEFAMGSSN-ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK NM E A G S T++ GP+ R+ + GGSS GS AAV L A++GT Sbjct: 140 GKTNMHELAFGVSGYNTAFPGPLGDGTRNAYDPTRIA-GGSSSGSGAAVGARLAPAALGT 198 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTG S+R PAS G +G +P+ GR GI + + D G I +++D +L Sbjct: 199 DTGASVRLPASVNGAIGFRPSVGRYDGAGITPISHTRDTPGPIANSMQDIVLL------- 251 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DA N D + +G+P + D L P + T Q ++ L+DAG + Sbjct: 252 ---DAVLAN----DAATLAALPAAQVRLGLPGYFWAD-LDPQVRDTVQAALTRLRDAGVQ 303 Query: 299 IVEISLPHTQYA-----LPAYYIISPAEASSNLARYD-GVRYG---LRVEGKDILEMYEN 349 +++I +P A +P + + L RYD GV + ++ D+ +++ Sbjct: 304 LIDIDMPDLPAANAAVGMPLCLYEQKPDLTDYLRRYDTGVSFEEVVAQISSPDVKAIFDG 363 Query: 350 TRSIGF----------GQEVKHRI-------MIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 G Q + R+ +I Y R +D+H L Sbjct: 364 LIVPGVLPLPDGQVLALQPLYERVIAEQRDALIAVY---HRAFDAHKL------------ 408 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 D +L PT P E ++ + + +V + AGLP +SVPA L Sbjct: 409 ---------DGLLFPTLPILPMAATPEASSFEAFSRLARNVDP--GSNAGLPGLSVPAGL 457 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 C+ +P+GL++ G P + + ++G +IE+ G + Sbjct: 458 CDIGLPVGLEVDGLPGEDRKVLAIGLMIEQILGRLK 493 >gi|325964896|ref|YP_004242802.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Arthrobacter phenanthrenivorans Sphe3] gi|323470983|gb|ADX74668.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 572 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 131/489 (26%), Positives = 216/489 (44%), Gaps = 71/489 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++++ + ++E+ +R+ +S LV++Y+ + ++ A+ V A A A+A Sbjct: 75 LADITELTIAEAATLIRAGRLSPELLVEAYLDRVGAFDAGYQAFNLVAADDALASA---- 130 Query: 61 KRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R + G L GIP+ IKD + T+ T A S I F P +++T KL G ++ Sbjct: 131 -RALAGTTHKGPLHGIPLAIKDNYYTRSYPTTANSFIFKDFTPPFDATAVSKLTAAGGIV 189 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK M A + ++ W + PGGSS GS+ AVA + +S+GT Sbjct: 190 LGKTQMGPLATTRATTPDGRITTVNAW--TPGNPQTNPGGSSSGSATAVAARMATSSVGT 247 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 TGGSI P++ G+KPT GR S GII + + D G + R +D+AI+L A+AG Sbjct: 248 QTGGSITAPSNAQNLTGLKPTMGRVSLYGIIPLSYTRDHPGPLARDAKDAAIMLSAMAGE 307 Query: 239 DECDATCVNL-PVPDYERALDQSIQGMTVG---------IPKEYRLDYLSPTIDKTWQQG 288 D D V L PVPD +A +G V IP + K + Sbjct: 308 DANDPRTVGLPPVPDLIQAASPVKRGNKVTMRWGTRVGVIPDFTAGSSATSAARKAFLDT 367 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 ++ + G ++V++SLP L ++ VR R E + + + + Sbjct: 368 LAGID--GIQVVDVSLPEDWETLTGTA-------------FNNVRLPERSE-QVLPVLRK 411 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT-LIKRDFTEAFEQGVDVILTP 407 + RS G + + ++ S + YL ++ + L++R + FEQ DV+L Sbjct: 412 DLRSFG--------VSVTGWLQGSMLGANEYLLGQRAKVLLLERVLDDLFEQ-CDVVLQ- 461 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 TS P + GLP +++P +P+G L G+P Sbjct: 462 ---TSPNPF----------------------DAIGLPELALPIGFDPAGVPIGTILGGRP 496 Query: 468 FREETLFSV 476 F E+ L +V Sbjct: 497 FAEDRLLAV 505 >gi|229161069|ref|ZP_04289057.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus R309803] gi|228622428|gb|EEK79266.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus R309803] Length = 483 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 146/501 (29%), Positives = 229/501 (45%), Gaps = 58/501 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 5 LTIHDIQAEMEAGQLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 64 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 65 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 124 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 125 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 182 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL + G Sbjct: 183 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGCLTG 242 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY + LD + G +G+ PK+Y Y S D +++ Sbjct: 243 VDEKDVATRKSEGIAEHDYTKYLDVNGLNGAKIGVYSNAPKDY---YESGEYDGILFKET 299 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L++ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 300 IQVLRNEGATVVENIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 355 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 ++ EN R++ +GQ R + + Y+ AR D + EQG+ Sbjct: 356 MKFNENIAERALKYGQTKLER----RKDFPNTLRNPEYINAR------LEDIYFSQEQGI 405 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 D L K+ N + Y + + AG P+I++PA E + P G+ Sbjct: 406 DFAL------------KKYNLDAILFPSY--IGSTICAKAGYPSIAIPAGYMESRRPFGI 451 Query: 462 QLIGQPFREETLFSVGQIIEK 482 L FRE TL + E+ Sbjct: 452 TLASTAFREGTLIKLAYAFEQ 472 >gi|118587252|ref|ZP_01544679.1| amidase [Oenococcus oeni ATCC BAA-1163] gi|118432241|gb|EAV38980.1| amidase [Oenococcus oeni ATCC BAA-1163] Length = 509 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 128/425 (30%), Positives = 213/425 (50%), Gaps = 27/425 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +I + ++ L G I +KD + G+ + +L+ ++P ++TV +L D GA +LGK Sbjct: 82 KIEHAESGSLLGKKIAVKDNISIAGVPMSMGTKLLESYKPKEDATVISRLLDQGADILGK 141 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + S+ T+ GPV +P ++ GGSS GS A VA ++G D Sbjct: 142 SVSENLFCSGSSFTADSGPVENP-----KVPGYSAGGSSSGSGALVASQQVDMALGCDQT 196 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+++ G G+KPT G GI S LD G + V D A+LL AIAG D Sbjct: 197 GSIRIPSAWCGIYGLKPTRGLVPYTGIGSVDQLLDTVGPMANKVSDLALLLDAIAGKDGL 256 Query: 242 DATCVNLPVPD---YERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAG 296 D L + + L I G VG+ ++ +R++ +S P +D+T Q+ + + K+ G Sbjct: 257 DGRQAWLSMRQSFSFAEQLSSEISGKKVGLLQQGFRIEGVSDPEVDQTVQKNVGYFKEVG 316 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYE---NTRS 352 + +IS+P A +I+ S RY G +G D+ E ++ N+++ Sbjct: 317 VSVQDISVPEFDLARNIADVINTLGTSRQQLRYGGSSFGTDTYYPIDLSETFKSRINSKT 376 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + ++ G + + D +Y RA+ + L+K+ F AF++ VD++ PT P + Sbjct: 377 VTSLAPLVQLMLYGGEMADGQIED-YYGRAQNMIPLVKKAFEAAFKE-VDILALPTVPFT 434 Query: 413 AFPLG------KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A L KE+ +SG +G +ND N+ G PAIS+P L E + P+G+ L+ Sbjct: 435 ARKLPPLKANIKEQIDSG-VGAGHNDG---PFNIIGCPAISIPCKLDEGQKPIGMMLVA- 489 Query: 467 PFREE 471 PF ++ Sbjct: 490 PFGQD 494 >gi|94968521|ref|YP_590569.1| amidase [Candidatus Koribacter versatilis Ellin345] gi|94550571|gb|ABF40495.1| Amidase [Candidatus Koribacter versatilis Ellin345] Length = 432 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 150/472 (31%), Positives = 211/472 (44%), Gaps = 70/472 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +RS I ++ ++ IE ++++NAYI V + + L G+P Sbjct: 13 IRSGRIPFSSAIEYFLARIER-HAELNAYISVACEFPTISTA------------GLGGVP 59 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I IKD +G T A S +L G ++ V +L GA ++GK N+ EFA G S Sbjct: 60 IAIKDLLNIEGQETTAASKVLAGNVAGADAEVISRLRGLGACLIGKTNLHEFAYGGSGMI 119 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S YGP +PW T SS GS+AAVA LCAA+IGTDT GSIR PAS G VG Sbjct: 120 SAYGPGKNPWNMEHITGG-----SSSGSAAAVAAGLCAAAIGTDTAGSIRLPASLCGIVG 174 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KPTY S G+I + S D G +TR+V D+ L A++G + LP E Sbjct: 175 FKPTYDAISTEGVIPLSVSYDHVGPMTRSVEDARYLFSAMSGTE--------LPAQKREG 226 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L VGIP+ + L P++ K + + ++ AG +IV Sbjct: 227 KL-------RVGIPETFFYSDLDPSVAKAMDEVLDAVRAAGHEIVRRDF----------- 268 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 + LA Y+ Y R ++ E+Y+ E RI G + S Sbjct: 269 ---EVDEDRTLASYESYAYH-RKWVEECPELYQ--------PETLRRIKSGEKITSEAAG 316 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS----AFPLGKEEN-NSGSMGHIY 430 D+ R + RT FT G+DV+LTPT P A L K E + + Sbjct: 317 DAAS-RLKVERTGAAEVFT-----GIDVMLTPTVPILPPRIADLLEKPETLRPAELLMLR 370 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 N T N+ G+P ISVP L +P+G+QL P R+ L + + EK Sbjct: 371 N---TRPFNVLGVPTISVPWDLSPSGLPIGIQLAAAPKRDYELLDIAEEFEK 419 >gi|116491466|ref|YP_811010.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Oenococcus oeni PSU-1] gi|116092191|gb|ABJ57345.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase [Oenococcus oeni PSU-1] Length = 505 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 128/425 (30%), Positives = 214/425 (50%), Gaps = 27/425 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +I + ++ L G I +KD + G+ + +L+ ++P ++TV +L D+GA +LGK Sbjct: 78 KIEHAESGSLLGKKIAVKDNISIAGVPMSMGTKLLESYKPKEDATVISRLLDHGADILGK 137 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + S+ T+ GPV +P ++ GGSS GS A VA ++G D Sbjct: 138 SVSENLFCSGSSFTADSGPVENP-----KVPGYSAGGSSSGSGALVASQQVDMALGCDQT 192 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+++ G G+KPT G GI S LD G + V D A+LL AIAG D Sbjct: 193 GSIRIPSAWCGIYGLKPTRGLVPYTGIGSVDQLLDTVGPMANKVSDLALLLDAIAGKDGL 252 Query: 242 DATCVNLPVPD---YERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAG 296 D L + + L I G VG+ ++ +R++ +S P +D+T Q+ + + K+ G Sbjct: 253 DGRQAWLSMGQSFSFAEQLSSEISGKKVGLLQQGFRIEGVSDPEVDQTVQKNVGYFKEVG 312 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYE---NTRS 352 + +IS+P A +I+ S RY G +G D+ E ++ N+++ Sbjct: 313 VSVQDISVPEFDLARNIADVINTLGTSRQQLRYGGSSFGTDTYYPIDLSETFKSRINSKT 372 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + ++ G + + D +Y RA+ + L+K+ F AF++ VD++ PT P + Sbjct: 373 VTSLAPLVQLMLYGGEMADGQIED-YYGRAQNMIPLVKKAFEAAFKE-VDILALPTVPFT 430 Query: 413 AFPLG------KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A L KE+ +SG +G +ND N+ G PAIS+P L E + P+G+ L+ Sbjct: 431 ARKLPPLKANIKEQIDSG-VGAGHNDG---PFNIIGCPAISIPCKLDEGQKPIGMMLVA- 485 Query: 467 PFREE 471 PF ++ Sbjct: 486 PFGQD 490 >gi|326776940|ref|ZP_08236205.1| Amidase [Streptomyces cf. griseus XylebKG-1] gi|326657273|gb|EGE42119.1| Amidase [Streptomyces cf. griseus XylebKG-1] Length = 503 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 148/506 (29%), Positives = 226/506 (44%), Gaps = 47/506 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E NF+ E LR+ ++++ EL D I AIE + +NA +ARAAA ++D+ Sbjct: 19 EWNFLTAEELATALRTGEVTSAELTDDAISAIERDDHAINAVCVPDFDRARAAARDADRA 78 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L GIP+ +K+ + G+ T P ++ +L D GAV+LGK Sbjct: 79 RARGEDGPLLGIPVTVKESYNVAGLPTTWGMPEHRNHLPAEDAVQVARLKDAGAVVLGKT 138 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ YG +PW D+ TPGGSSGGS+AA+A A SIG+D GG Sbjct: 139 NVPLGLQDIQTFNEIYGTTNNPW----DHDR-TPGGSSGGSAAALASGFGALSIGSDIGG 193 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-------SFAPSLDQAGIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G+I + P L G + R+ RD ++LL + Sbjct: 194 SLRTPAHFCGVHAHKPTLGLVADRGMIPPATPALPYGPDLAVVGPMARSARDLSLLLDVM 253 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D A + LP +ER ++ V + E+ L + + L Sbjct: 254 AGPDPLTFGVAHTMTLPPARHER-----LEDFRVLVLDEHPLLPTGAAVRAGVGRVADAL 308 Query: 293 KDAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 D GA + S LP A YY + A ++ ARY E YE Sbjct: 309 ADGGAHVERHSALLPDLAEAATLYYRLLIAASA---ARYPA-------------EEYERL 352 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ G + R + + SS C + A R L + + F D ++ P TP Sbjct: 353 RARAAGLSAEDRSLSAVRLRSSVCSHREWAAAHDGRELHRHGWRRFFAD-FDAVVCPVTP 411 Query: 411 TSAFPLGKEEN--------NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 T AFP E + + + ++ V+ M GLP+ +VPA + +P+G+Q Sbjct: 412 TPAFPHDHELDPMERRIDIDGVDVPYLDQLVWAGLATMPGLPSTAVPAGRSPEGLPVGVQ 471 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFR 488 ++G F + T + +++E+ G FR Sbjct: 472 IVGPMFEDRTTLRLAELLERRIGGFR 497 >gi|169631490|ref|YP_001705139.1| putative amidase [Mycobacterium abscessus ATCC 19977] gi|169243457|emb|CAM64485.1| Probable amidase [Mycobacterium abscessus] Length = 463 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 147/469 (31%), Positives = 220/469 (46%), Gaps = 34/469 (7%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPI 76 S ++S VE + + I +S +NAY V + A AAA ES++R R L+G+PI Sbjct: 21 SGELSPVEATAAVLSRIAQHDSAINAYCLVDEEAALAAATESEERWRGHYTRGLLDGVPI 80 Query: 77 GIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 IKD F T+ T S ++D P +S Q++ +G VM+GK EFA ++ Sbjct: 81 SIKDVFLTRNWPTLRGSGLIDPDGPWDVDSPAVQRIRADGMVMVGKTTTPEFAWKGVTDS 140 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 G +P + T GGSSGGS+AAVA + SIGTD GGS+R PASF G VG Sbjct: 141 RQRGITHNP-----ADPSRTAGGSSGGSAAAVAAGMAPMSIGTDGGGSVRIPASFCGVVG 195 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KPT+GR I F P L G ITRTV D+A+L+ I+ D D T ++ + Y Sbjct: 196 FKPTHGRIPMYPISPFGP-LAHGGPITRTVEDAALLMDIISLPDYRDPTSLSPTLTTYRS 254 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + + G+ + + P + + ++ L DAG + P + ++ Sbjct: 255 QVYRDMTGLDIAYSPTLGYVDVDPEVADLVENAVNALNDAGLPVTHAD-PGFSDPIDSFE 313 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 + A A+++L Y L G DI G G Sbjct: 314 TLWAAGAAASLNNYG----ALDDVGTDIDPGLAQMWDTGAGASA---------------- 353 Query: 376 DSHYLRARKIRTLIKRDFTE-AFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDV 433 + YL AR T ++ T AF + +V++TPT P AFPLG + NSG Sbjct: 354 -TEYLAARN--TCVQLGVTMGAFHELHNVLITPTVPIPAFPLGADVPPNSGMRWWAQWTP 410 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT NM PA+S+P + +P+G+Q++G ++ + +VG E+ Sbjct: 411 FTYPFNMTQQPALSIPVGNTAQGLPVGMQIVGPRHSDDLVLAVGHFAER 459 >gi|269929389|ref|YP_003321710.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269788746|gb|ACZ40888.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 506 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 146/495 (29%), Positives = 229/495 (46%), Gaps = 40/495 (8%) Query: 16 LRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDK--RIINGDARD 70 RS +++ +LV+ Y I A++ ++NA I V A A+ +D+ R Sbjct: 20 FRSGQLTSRQLVELYLARIDALDKQGPEINAII-TVNPHALDEADAADRAFRERGEFIGP 78 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD T+G+ T S L + P ++T+ +L GAV+L K N+ +FA Sbjct: 79 LHGVPVLVKDQLETRGLTTTFGSAALKDYVPDSDATIVARLRAAGAVILAKTNLPDFATS 138 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +S G +P+ + PGGSS G+ A VA L A IG DTGGSIR PASF Sbjct: 139 WFGFSSSGGETKNPY-----VLERDPGGSSAGTGAGVAANLGAVGIGEDTGGSIRVPASF 193 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV---- 246 VG++ T G SR G D AG +TRTVRD+AILL + GYD D V Sbjct: 194 DNLVGLRVTTGLISRAGCSPLVEFQDTAGPMTRTVRDAAILLDTLVGYDPSDPYTVAALH 253 Query: 247 -NLPVPDYERAL-DQSIQGMTVGIPKE---YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P Y L +++G +G+ ++ D S +++ +Q I+ L+ GA++++ Sbjct: 254 ERRPANGYAADLTPDALRGARLGVLRDAFGADDDPDSGPVNRVIEQAIADLRRLGAEVID 313 Query: 302 -ISLPHTQYALPAYYIISPAEASSNLAR--YDGVRY-GLRVEG--KDILEMYENTRSIGF 355 + LP+ Q YI AE S L R YD R+ R + + E+YE + + Sbjct: 314 PVRLPNLQ-----EYI---AETSLYLHRSKYDLNRFLAARPTAAMRSVREIYEAGQ---Y 362 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAF 414 I I + Y R R + +R+ + + +D ++ P Sbjct: 363 HPRQDLFIQIAEEAPEVPEDRADYFRKLAQREVFRRELLKLMADHELDALIFPD--VQVL 420 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P + + +G + T+ + LP ISVPA P+G++ +G+P+ E L Sbjct: 421 PPLRADLQAGRWPVLSFPTNTLIGSQTDLPGISVPAGFSPDGAPVGIEFLGKPYDEANLL 480 Query: 475 SVGQIIEKEAGYFRP 489 E+E G+ RP Sbjct: 481 RFAYAFEEETGHRRP 495 >gi|290891051|ref|ZP_06554114.1| hypothetical protein AWRIB429_1504 [Oenococcus oeni AWRIB429] gi|290479268|gb|EFD87929.1| hypothetical protein AWRIB429_1504 [Oenococcus oeni AWRIB429] Length = 505 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 127/425 (29%), Positives = 212/425 (49%), Gaps = 27/425 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +I + ++ L G I +KD + G+ + +L+ ++P ++TV +L D+GA +LGK Sbjct: 78 KIEHAESGSLLGKKIAVKDNISIAGVPMSMGTKLLESYKPKEDATVISRLLDHGADILGK 137 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + S+ T+ GPV +P ++ GGSS GS A VA ++G D Sbjct: 138 SVSENLFCSGSSFTADSGPVENP-----KVPGYSAGGSSSGSGALVASQQVDMALGCDQT 192 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR P+++ G G+KPT G GI S LD G + V D A+LL AIAG D Sbjct: 193 GSIRIPSAWCGIYGLKPTRGLVPYTGIGSVDQLLDTVGPMANKVSDLALLLDAIAGKDGL 252 Query: 242 DATCVNLPVPD---YERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWLKDAG 296 D L + + L I G VG+ ++ +R++ +S P +D+T Q+ + + K+ G Sbjct: 253 DGRQAWLSMGQSFSFAEQLSSEISGKKVGLLQQGFRIEGVSDPEVDQTVQKNVGYFKELG 312 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYE---NTRS 352 + +IS+P A +I+ S RY G +G D+ E ++ N+++ Sbjct: 313 VSVQDISVPEFDLARNIADVINTLGTSRQQLRYGGSSFGTDTYYPIDLSETFKSRINSKT 372 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + ++ G + + D +Y RA+ + L+K+ F AF++ VD++ PT P + Sbjct: 373 VTSLAPLVQLMLYGGEMADGQIED-YYGRAQNMIPLVKKAFEAAFKE-VDILALPTVPFT 430 Query: 413 AFPLG------KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A L KE+ +SG +D F N+ G PAIS+P L E + P+G+ L+ Sbjct: 431 ARKLPPLKADIKEQIDSGVGAGHNDDPF----NIIGCPAISIPCKLDEGQKPIGMMLVA- 485 Query: 467 PFREE 471 PF ++ Sbjct: 486 PFGQD 490 >gi|83955267|ref|ZP_00963922.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Sulfitobacter sp. NAS-14.1] gi|83840260|gb|EAP79434.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Sulfitobacter sp. NAS-14.1] Length = 448 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 138/478 (28%), Positives = 207/478 (43%), Gaps = 54/478 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+ RDRL S + A+ LVDSYI+ IE Q+ A+ + ARA A D G Sbjct: 11 SVTLLRDRLASGALDALALVDSYIKRIEAREPQVGAWAWFDPEFARAQARTLDAHRRAGR 70 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P+ +KD T+ I T+ G P ++ V ++L GA+++GK E Sbjct: 71 PLGRLHGLPVALKDVIDTQRIPTENGCVQDAGRVPLRDAFVVERLRKEGAILMGKTVTTE 130 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 A +T+ TPGGSS GS+AAVA + +IGT TGGS+ + Sbjct: 131 LAFMQPGKTAN-----------PHNLAHTPGGSSQGSAAAVADGMVPLAIGTQTGGSVIR 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATC 245 PASF G G KPT+G R G+++ +PSLD G+ +A+L + + G D+ D AT Sbjct: 180 PASFCGVTGYKPTFGAIPRRGVLTQSPSLDTIGVFASDPAGAALLAEVLFGQDDEDNATT 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + A T P ++ P W+ L DA A++++ +L Sbjct: 240 LC--------AAPALHAAATSAPPLPLVFGFIRP---PGWEDAEPQLHDAFAELLD-ALG 287 Query: 306 HTQYALPAYYIISPAEASS---NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 + LP + A NLA Y G D L G + Sbjct: 288 DQAFELPLPAVFDTAADQRKLINLAEMSYHYYPYWHRGADTL-----------GPITRDA 336 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I G V + YL AR + ++ E F + DVIL P+ P A P G E Sbjct: 337 IEQGNAVPA-----RDYLSARDMPKVLNAALDEMFTR-CDVILCPSAPGPA-PKGLETTG 389 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++N ++T G P I++P + +P+G+QL+G + L Q + Sbjct: 390 D----PVFNGLWT----FCGTPCINLPLFTSTEGLPMGVQLVGARHNDARLLRTAQWL 439 >gi|189218649|ref|YP_001939290.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Methylacidiphilum infernorum V4] gi|189185507|gb|ACD82692.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Methylacidiphilum infernorum V4] Length = 473 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 143/485 (29%), Positives = 217/485 (44%), Gaps = 59/485 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL SE ++ K+IS VELVD Y IE + ++A+ + + A+ A+ + Sbjct: 1 MKELWRKTASELGQLIKKKEISPVELVDLYATRIEKIDPLIHAFTVLSLESAKEKAKALE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I++G+ L GIPI +KD F + + S + + + + ++L + A++L Sbjct: 61 KEIVSGNILSPLCGIPITVKDHFDIVSLPSTCGSLLFKDYVAKEDHLLVKRLKEAKAIIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NM EF + + + +PW+ +D T GGSS GS+AAVA LC S+G+D Sbjct: 121 GKTNMPEFGFSAVSHNPIFPATRNPWK-LD----LTAGGSSSGSAAAVAAGLCPLSLGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCS----RLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 GGSIR PASF G G KP+ GR R AG + RTV D+ +LL + Sbjct: 176 GGGSIRIPASFCGVFGYKPSRGRIPWPIGRGRDFESWELFAHAGPLCRTVEDAVLLLSVL 235 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS----- 290 +G D D + P +E L I+G+ + + LD +D +Q +S Sbjct: 236 SGPDSSDPYSLPPPEFAWEDCLKADIKGLKIA----FSLDLGYARVDSELKQIVSKAVEL 291 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 + D G I EI P + P+EA L + LR + EN Sbjct: 292 FETDLGCTIEEID--------PGW--PDPSEAYLTLVYFGSDLVALRKAAE------ENR 335 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 + I H I+ L + +A K+R + ++ E ++ L+P T Sbjct: 336 KKIS------HHIV---DFLKRNFTPEDFSQALKLRRELVYKMSKLMEN-YELFLSPVTA 385 Query: 411 TSAFPL---------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 F L GK N HI FT +NM G PA +VPA +P+GL Sbjct: 386 VPPFSLFFQGPDCIEGKPANP-----HISWIPFTYIMNMTGQPAAAVPAGWTSTNLPVGL 440 Query: 462 QLIGQ 466 Q++G+ Sbjct: 441 QIVGR 445 >gi|254422821|ref|ZP_05036539.1| Amidase, putative [Synechococcus sp. PCC 7335] gi|196190310|gb|EDX85274.1| Amidase, putative [Synechococcus sp. PCC 7335] Length = 568 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 147/502 (29%), Positives = 231/502 (46%), Gaps = 53/502 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 +K ++ +LV Y+ IE + Q +NA I + A A A D + + L Sbjct: 63 FEAKTLTVEQLVQLYLNRIETYDKQGPAINALISI-NPNALATARLLD-QFMPQKLSSLY 120 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM--G 130 GIPI +KD F T + T S +L P ++ V ++L + GA++LGK NM EFA+ G Sbjct: 121 GIPIILKDNFNTIDLPTTGGSAVLANSIPPEDAVVVKRLKEAGAIILGKANMSEFALSAG 180 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +S G ++P+ ++ + GS+ +A A F S G+DT GSIR PASF Sbjct: 181 RLGYSSQGGLTLNPY-DLNRDASGSSSGSAAAIAANFAVF----STGSDTAGSIRGPASF 235 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC---VN 247 TG VGIKPT G S G+I APS++ G I +TV D+AI L +AG ++ + Sbjct: 236 TGLVGIKPTSGLISPKGVIPLAPSVEANGPIAKTVTDAAIGLGVMAGLSSNNSATLGSIA 295 Query: 248 LPVPDYERALD-QSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISL 304 P DY + LD +++G +GI + D+LS P +D+ +Q + L GA +VE+ L Sbjct: 296 KPFKDYTQFLDVDALKGARIGIVR----DFLSGNPEVDQIFQDALGTLSSLGATVVEVKL 351 Query: 305 PHTQYALPAY-----YIISPAEASSNLARY-----DGVRYGLR--VEGKDILEMYENTRS 352 A+ +Y II +E + Y D L+ +E ++ + Sbjct: 352 SSDGLAVDSYGHLLDSIIQ-SEFFPQIETYLQTLDDAYPKTLKALIEASLDSDLMSSNTP 410 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPT 411 + + ++ I T LS +S Y+ A R ++ F +D ++ PT Sbjct: 411 VNPNRIALYQASIETGGLS----NSEYVAAIAQRLDLQDAVFSTFSLSNLDALVYPT--V 464 Query: 412 SAFPLGKEENNSGSM---------GHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLG 460 P + NNS + I ND + V N+ G P I+VPA + +P+G Sbjct: 465 DGLPSLTKANNSNELKDSIFPHDFDSIKNDPYRVGYLANLTGFPDITVPAGFTQSALPVG 524 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 L + E L + E+ Sbjct: 525 LSFFAPAYSEPKLLGLAYAFEQ 546 >gi|86751162|ref|YP_487658.1| amidase [Rhodopseudomonas palustris HaA2] gi|86574190|gb|ABD08747.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 467 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 133/475 (28%), Positives = 215/475 (45%), Gaps = 52/475 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPI 76 ++ ++A++ ++ + I ++ +NA+ ++VA++AR A D I G+ L G+P Sbjct: 21 NRTMTALDATEAALARIAQRDATLNAFTDIVAERARNRARAIDAAIARGEQVGPLAGVPF 80 Query: 77 GIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +K+ F G+ T+A S I P ++T+ ++L GAV++G LNM E+A + E Sbjct: 81 AVKNLFNVAGLTTRAGSKINRDLAPAKRDATLIERLEAAGAVLIGALNMGEYAYDFTGEN 140 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + GP +P T + G + V ++G+DT GSIR P+SF G G Sbjct: 141 FHDGPSRNPHDPTRMTGGSSGGSGAAVGGGEV-----PLALGSDTNGSIRVPSSFCGIFG 195 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR R F S D G R V D A+ + G D DA C + Sbjct: 196 LKPTYGRLPRSRSFPFVASFDHLGPFARNVADLALAYDVMQGPDSDDAACSTRSIEPVHA 255 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL Q + G+ + Y L P ++ + + A + + + LP A A + Sbjct: 256 ALAQGLDGLRIARAGGYFAANLFPEA----REAVDRVAKALSITITVELPEAARARAAAF 311 Query: 316 IISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +I+ E AS +L R LR D F V+ R++ G + + Sbjct: 312 VITTVEGASLHLDR-------LRQRPND------------FDPAVRDRLIAGAMIPAPLV 352 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--------EENNSGSM 426 RA+K R + E F + VDVI+ P TP A LG+ E ++ Sbjct: 353 D-----RAQKFRRWYRARVLELF-RDVDVIIAPATPCVAPKLGQQSFMLDGVELPVRANI 406 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G + T ++ GLP ++VP L + MP+G+Q+I P+RE+ V +E Sbjct: 407 G-----IHTQPISFIGLPVVAVPIPL--EPMPIGIQIIAAPWREDLALRVAHALE 454 >gi|10178225|dbj|BAB11605.1| unnamed protein product [Arabidopsis thaliana] Length = 607 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 219/481 (45%), Gaps = 41/481 (8%) Query: 17 RSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 RSK + +++ I IE I A + AE S +R G+ L+ Sbjct: 139 RSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISVLD 198 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GI + IKD T + L R +S V KL GA++LGK NM E MG+ Sbjct: 199 GIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGMGT 258 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + S YG +P ++T GGSS GS+A VA LC+A++GTD GGS+R P++ Sbjct: 259 TGNNSNYGTTRNP----HDPKRYT-GGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALC 313 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G+K TYGR G + +++ G + ++ D+ ++ AI G D + P Sbjct: 314 GITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADRYNLKPSPP 373 Query: 252 DYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISLPH 306 + + L +I + +G ++ D S I + + L + G K+VEI +P Sbjct: 374 CFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKVVEIVVPE 433 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ I + S+L Y E ++ +TR+ Sbjct: 434 LEEMRAAHVISIGSPTLSSLTPY--------CEAGKNSKLSYDTRT-------------- 471 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 ++ + S Y+ A+ +R + F+ VDVI+TPTT +A + + +G Sbjct: 472 SFAIFRSFSASDYIAAQCLRRRLMEYHLNIFKD-VDVIVTPTTGMTAPVIPPDALKNGET 530 Query: 427 G-HIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + D+ F +A N+ G PAISVP ++ +P+GLQ++G+P+ E T+ + +E+ Sbjct: 531 NIQVTTDLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRPWAEATVLGLAAAVEEL 590 Query: 484 A 484 A Sbjct: 591 A 591 >gi|119505174|ref|ZP_01627249.1| amidase [marine gamma proteobacterium HTCC2080] gi|119458865|gb|EAW39965.1| amidase [marine gamma proteobacterium HTCC2080] Length = 486 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 145/537 (27%), Positives = 220/537 (40%), Gaps = 105/537 (19%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L F + + DRL+ KD+S+VEL+D ++ + N Q+NA IE+ ++A A +D Sbjct: 1 MTTLAFESGLQLADRLKRKDLSSVELLDYFLDRVRRFNPQLNAVIELQEEEAMGWALTAD 60 Query: 61 KRIINGDARDL---EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 K A L G+P+ IK+ F G+HT + + ++ +L + GA Sbjct: 61 KAQAEQTAESLAPFHGVPMTIKESFDVTGMHTTRGNPAFEHHVAETDALAVSRLRNAGAN 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + GK N+ + + YG +PW + T GGSSGGS+ A+A L G Sbjct: 121 IFGKTNVPLDLADFQSYNAIYGTTNNPWDT-----GRTAGGSSGGSAVAMAAGLSGIENG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG----IISFAPSLDQAGIITRTVRDSAILLK 233 +D GGSIR PA + G G KPT+G G + P L G I R+ RD LL Sbjct: 176 SDIGGSIRNPAHYCGVFGHKPTWGLLPPRGHAAPSVLAQPDLAVIGPIARSARDLEALLL 235 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 A AG DE A YRLD PT Sbjct: 236 AEAGPDEIMAGG--------------------------YRLDLSQPTFS----------- 258 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNL--ARYDGVRYGLRVEGKDILEMYENTR 351 H + A + SP S + AR +GV +R G + Sbjct: 259 ------------HLKALRVAAMVNSPLAPVSQICEARVEGVLDLIRHAGGQVNYDARPDF 306 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYL----------------RARKIRTLIK--RDF 393 +G G V ++ V++SR D+ + RA+ +R RD+ Sbjct: 307 ELGEGHAVYQNLLWA--VMASRSDDATFAQLAAEVAALASDDRSDRAQNLRARFATYRDY 364 Query: 394 TEA-------------FEQGVDVILTPTTPTSAFPLGKEE------NNSGSMGHIYNDVF 434 + A F Q DV++TP T AFP + + G+ + +F Sbjct: 365 STANEARTHQRWAWHRFFQEYDVMVTPIMATPAFPHDHQPFGQRTVDVDGAPRPYFEQLF 424 Query: 435 --TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +A+N + LPA VP +P+G+Q+IG F + + V +++E+E F P Sbjct: 425 WAGLAIN-SYLPATIVPTGTLGGGLPVGVQIIGPEFGDLKVLHVAKLLEREGLAFVP 480 >gi|254248127|ref|ZP_04941447.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia cenocepacia PC184] gi|124874628|gb|EAY64618.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia cenocepacia PC184] Length = 494 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 128/491 (26%), Positives = 210/491 (42%), Gaps = 40/491 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +R+K +S E + +Y+ IE N +NA + + + A A A E D + Sbjct: 22 LSAGELSSAIRTKAVSCAETMRAYLDHIERVNGAVNAIVALRDRDALLAEAAEKDAELAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ R L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYRGWLHGMPQAPKDLAMTKGLRTTYGSPIFRENVPQADSVGVARMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS YG +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F VG +P+ GR R G+ F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIVGFRPSQGRVPRWPGVDVFMQQLGIEGPMGRTVGDVAQLLAIQAGYDRNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT--IDKTWQQGISWLKDAGAKIVE 301 + + + LD ++G + ++ YL+ + + G++ L++ G + Sbjct: 257 LSLAEDPAVFAQPLDADLRGKRIAWVGDWN-GYLATEAGVLAQCEHGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ALPA+ A + R L G + + R E + Sbjct: 314 ------DAALPAF-------APDRIWRLWLTHRHLLSGGALLAHYRDPARRALLKPEAIY 360 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + + + +D+ R + ++ +F D + PT FP E+ Sbjct: 361 EVEGLLALQGAAVFDASVERTAWHQAVL------SFFDRYDFVAAPT--AQVFPFDVEQR 412 Query: 422 NSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + D + V +AG P I+VP + +P+G+QLIG+P + + Sbjct: 413 WPKEIAGRAMDTYHRWMETVVPWTLAGCPVINVPVGFNDAGLPMGMQLIGRPRADLAVLQ 472 Query: 476 VGQIIEKEAGY 486 + E+ A + Sbjct: 473 LAHGYEQAADW 483 >gi|156375871|ref|XP_001630302.1| predicted protein [Nematostella vectensis] gi|156217320|gb|EDO38239.1| predicted protein [Nematostella vectensis] Length = 498 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 130/428 (30%), Positives = 204/428 (47%), Gaps = 35/428 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD GI S IL+G+ P ++TV ++ D G +LGK ++F Sbjct: 93 LHGKTIAIKDNIPVAGIPMMNGSRILEGYVPDVDATVVTRVLDAGGRILGKSVCEDFCCS 152 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + ++ GPV++P +D+T GSS GS+A +A + +IG D GGSIR PA+ Sbjct: 153 DESFSTATGPVLNP---LDTTRSAG--GSSSGSAALIASGVVDMAIGGDQGGSIRTPAAA 207 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE--CDA-TCVN 247 G VG+KPTYG I S S D G + +TV D+A+LL+AIAG D+ D + Sbjct: 208 CGIVGLKPTYGLVPYTAISSIEMSHDHCGPMAKTVHDTALLLEAIAGLDKEGLDPRQPRD 267 Query: 248 LPV-PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +PV P Y + L I G+ +G+ KE + P ++ ++ L+ GA + ++S+P Sbjct: 268 MPVQPVYTKRLTGVISGVRIGLLKEGFSSLVEPDVNVMVRRSAERLQQLGAVVEDVSVP- 326 Query: 307 TQYALPAYYIISPAEASSNLARYD-----GVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ++L + YI SS LA Y+ V GL+ D + TR Sbjct: 327 -WHSLGSIYIC--VAGSSGLAYYNTHMQLAVARGLKTHTNDSAPTVKLTR---------- 373 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP--TSAFPLGKE 419 M+ Y L Y Y +++ +R + R + EA + V++ PT P T P GK Sbjct: 374 --MMARY-LKEDYYGVFYSKSQNLRRELTRAYDEALSK-YHVLIMPTVPKRTPKIPDGKV 429 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 T +++G PA+S+ A +P+G+ ++G+ F + + +V Sbjct: 430 SIKEFVHTAFLQTCNTAPFDLSGHPALSINAG-SSHGLPVGMMIVGRRFDDAMVLNVAHA 488 Query: 480 IEKEAGYF 487 EK F Sbjct: 489 YEKLRDQF 496 >gi|229138797|ref|ZP_04267378.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-ST26] gi|228644713|gb|EEL00964.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-ST26] Length = 493 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 145/502 (28%), Positives = 226/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQRAMEDGKLTSKELVMYYLHRIAKYDQDGPEINSILEINPDAIFIAEALDYERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGKRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKT 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL + G Sbjct: 193 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGGLTG 252 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY + LD + G +G+ PK+Y Y S D+ +++ Sbjct: 253 VDERDVATRKSEGIAEHDYTKYLDVNGLNGTKIGVYNNAPKDY---YKSGEYDENLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I++P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLRSKGATVVEDINIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 366 MEFNENIAERALRYGQTKLER----RKDFPNTLRNPQYLNAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA + P G Sbjct: 416 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMDNGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 461 ITLASTAFHEGTLIKLAYAFEQ 482 >gi|228933395|ref|ZP_04096249.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826259|gb|EEM72038.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 493 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 145/502 (28%), Positives = 227/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINLDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 75 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS G++ AVA S+G Sbjct: 135 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGAAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 253 LDEKDVATHKSKGIAEHDYTKFLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 310 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 365 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + YL AR D + EQG+ Sbjct: 366 MEFNENIAERALKYGQTKLER----RKDIPNTLRNPEYLNAR------LEDIYFSQEQGI 415 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 416 DFALVKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFG 460 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E L + E+ Sbjct: 461 ITLASTAFSEGILIKLAYAFEQ 482 >gi|206975150|ref|ZP_03236064.1| amidase family protein [Bacillus cereus H3081.97] gi|217959572|ref|YP_002338124.1| amidase [Bacillus cereus AH187] gi|206746571|gb|EDZ57964.1| amidase family protein [Bacillus cereus H3081.97] gi|217063491|gb|ACJ77741.1| amidase family protein [Bacillus cereus AH187] Length = 491 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 145/502 (28%), Positives = 226/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQRAMEDGKLTSKELVMYYLHRIAKYDQDGPEINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGKRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL + G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGGLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY + LD + G +G+ PK+Y Y S D+ +++ Sbjct: 251 VDERDVATRKSEGIAEHDYTKYLDVNGLNGTKIGVYNNAPKDY---YKSGEYDENLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I++P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSKGATVVEDINIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALRYGQTKLER----RKDFPNTLRNPQYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA + P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMDNGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 459 ITLASTAFHEGTLIKLAYAFEQ 480 >gi|222095714|ref|YP_002529771.1| amidase [Bacillus cereus Q1] gi|221239772|gb|ACM12482.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Q1] Length = 491 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 145/502 (28%), Positives = 226/502 (45%), Gaps = 60/502 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQRAMEDGKLTSKELVMYYLHRIAKYDQDGPEINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGKRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL + G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGGLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY + LD + G +G+ PK+Y Y S D+ +++ Sbjct: 251 VDERDVATRKSEGIAEHDYTKYLDVNGLNGTKIGVYNNAPKDY---YKSGEYDENLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I++P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSKGATVVEDINIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + YL AR D + EQG+ Sbjct: 364 MEFNENIAERALRYGQTKLER----RKDFPNTLRNPQYLNAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA + P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMDNGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + L F E TL + E+ Sbjct: 459 ITLASTAFHEGTLIKLAYAFEQ 480 >gi|1813489|gb|AAB41685.1| amidase [Bacillus firmus] Length = 481 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 145/490 (29%), Positives = 235/490 (47%), Gaps = 47/490 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + + ++++AVEL Y+ I + +++ +EV AA +R G Sbjct: 13 IEELQRMMDLQEVTAVELTRYYLDRIAAYDQNLSSVLEVNPDALHIAAALDAERTRTGKR 72 Query: 69 RDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ +KD TK +HT A + +L+ ++ + +KL GAV+LGK NM E+ Sbjct: 73 SILHGIPVLLKDNIDTKDKLHTSAGALVLEHSYAKKDAFLVKKLRKAGAVILGKTNMSEW 132 Query: 128 A--MGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 A M + N S Y G +P+ KF GGSS GS +A+A AA++GT+T Sbjct: 133 AYFMSTDNMPSGYSSRGGQTENPY----GIGKFDVGGSSSGSGSAIAANFAAAAVGTETS 188 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+S VGIKPT G SR GII + + D AG + RTVRD+ LL + G DE Sbjct: 189 GSILSPSSQNSIVGIKPTVGLISRSGIIPLSHTQDTAGPMARTVRDAVFLLCEMMGMDEE 248 Query: 242 DATCVNLPV-PD-YERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D P PD +AL++ S+ M +G+ +E +D L + ++ + L AGA Sbjct: 249 DLITSVCPYQPDQLLKALNKSSLNEMRIGVVREQVMDLLGEEKREVYETALKQLSRAGAN 308 Query: 299 IV-EISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYEN--TRSI 353 ++ ++++P + Y + E +N+ +Y + + V DI+E EN +++ Sbjct: 309 VIDDVNIPSSTRKWS--YNVLTYEFKANVNKYLSELDSSMSVRTLTDIIEWNENHHEKAL 366 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP-TTPTS 412 +GQ ++I S + + YL+A + D + +G+D +L Sbjct: 367 KYGQS----LLIEADKTSGKLTEKEYLKA------LNEDAYFSATEGIDAVLREHQLDVI 416 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP NN G+ AG P+I+VPA E P+G+ + ++E Sbjct: 417 VFP-----NNLGA----------AIPAKAGYPSITVPAGYTESGEPVGITFTAKAWQEPL 461 Query: 473 LFSVGQIIEK 482 L + + EK Sbjct: 462 LIEIAEAFEK 471 >gi|126740264|ref|ZP_01755953.1| amidase [Roseobacter sp. SK209-2-6] gi|126718719|gb|EBA15432.1| amidase [Roseobacter sp. SK209-2-6] Length = 788 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 126/482 (26%), Positives = 215/482 (44%), Gaps = 33/482 (6%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-----------DARDLEG 73 E+++ Y+QA + ++ + EV ++ + +N D + L G Sbjct: 317 EIIEPYMQAYDRLDAMPDYLPEVRYPRSPGHFPTQTENTLNAWYVKTEVRGAPDGK-LRG 375 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 I +KD G+ S I++G+ P ++T+ ++ D GAV+ GK + + F + + Sbjct: 376 KRIALKDTICLAGVPMMNGSSIMEGYTPEIDATIVTRMLDEGAVITGKAHCENFCLSGGS 435 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 T+ GP+ +PW+ + GGSSGGS+A VA +I D GGSIR P+S G Sbjct: 436 HTNAKGPIHNPWKR-----GYMAGGSSGGSAALVAAGEVDMAIAGDQGGSIRIPSSNCGV 490 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPT+G G + ++D G +T TV D+A+LL+ +AG D D V Y Sbjct: 491 YGMKPTHGLVPYTGAMPIEQTIDHLGPVTNTVADNALLLEVLAGEDGLDPRQYKPTVYSY 550 Query: 254 ERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 AL + GM +GI KE + + +D Q ++ GA++ E+S+P A+ Sbjct: 551 TEALGRGAHGMRIGILKEGFGHENSETDVDAKVMQAADRFRELGARVEEVSIPEHYTAMD 610 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV-- 369 A+ I+ + G G G + M ++ + G E+ H + +V Sbjct: 611 AWTAITLEGLQDGMMW--GNSTGTNYRGLFLPSMTDHMAQWQGRADELSHSLKACMFVGE 668 Query: 370 -LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + Y + + I L + A +Q D++L PT P P S+ Sbjct: 669 HFQRQYRGRFYGKGQNIMRLCNERYLAALKQ-YDLLLMPTLPIKPQP---HPPADCSLSL 724 Query: 429 IYNDVFTVAVNMA----GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 F + N A GLPA+++P L E +P+G+ L+G + E ++ E+ Sbjct: 725 YVQRAFEMVPNTAPFNGGLPAMNIPCGLSE-GLPIGMMLVGPHYGEMKIYQAADAFEQSG 783 Query: 485 GY 486 + Sbjct: 784 DW 785 >gi|186532737|ref|NP_201249.2| AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase); N-(long-chain-acyl)ethanolamine deacylase/ amidase gi|32454719|gb|AAP83139.1| N-acylethanolamine amidohydrolase [Arabidopsis thaliana] gi|332010510|gb|AED97893.1| fatty acid amide hydrolase [Arabidopsis thaliana] Length = 607 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 217/481 (45%), Gaps = 41/481 (8%) Query: 17 RSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 RSK + +++ I IE I A + AE S +R G+ L+ Sbjct: 139 RSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISVLD 198 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GI + IKD T + L R +S V KL GA++LGK NM E MG+ Sbjct: 199 GIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGMGT 258 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + S YG +P T GGSS GS+A VA LC+A++GTD GGS+R P++ Sbjct: 259 TGNNSNYGTTRNPHDPKRYT-----GGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALC 313 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G+K TYGR G + +++ G + ++ D+ ++ AI G D + P Sbjct: 314 GITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADRYNLKPSPP 373 Query: 252 DYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISLPH 306 + + L +I + +G ++ D S I + + L + G K+VEI +P Sbjct: 374 CFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKVVEIVVPE 433 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ I + S+L Y E ++ +TR+ Sbjct: 434 LEEMRAAHVISIGSPTLSSLTPY--------CEAGKNSKLSYDTRT-------------- 471 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 ++ + S Y+ A+ +R + F+ VDVI+TPTT +A + + +G Sbjct: 472 SFAIFRSFSASDYIAAQCLRRRLMEYHLNIFKD-VDVIVTPTTGMTAPVIPPDALKNGET 530 Query: 427 G-HIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + D+ F +A N+ G PAISVP ++ +P+GLQ++G+P+ E T+ + +E+ Sbjct: 531 NIQVTTDLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRPWAEATVLGLAAAVEEL 590 Query: 484 A 484 A Sbjct: 591 A 591 >gi|116623437|ref|YP_825593.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116226599|gb|ABJ85308.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 514 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 136/503 (27%), Positives = 229/503 (45%), Gaps = 35/503 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEES 59 E+ +++ D +++ ++ LV Y++ IE + +N+ + V R AAE Sbjct: 23 EVEEATIAQVHDAMKAGRLTCRALVGMYLKRIEAYDKNGPAINSIVTVNPDVERQAAELD 82 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + +G L +P+ +KD F TKG+ T + L G+ P ++ +++ D GA++L Sbjct: 83 ARFAQSGLTGPLHCVPVIVKDNFETKGLQTTDGALALAGYLPEKDAFQVKRVKDAGALVL 142 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K NM E+A + P + R+ + D+ T GSSGG++AA+A L +G+D Sbjct: 143 AKSNMAEWAFSPYETVNSILPGYT--RNPYALDRVT-AGSSGGTAAAIAASLGLVGLGSD 199 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TG SIR P+S GI+ T G SR G++ + D AG + RTV D+A + + I G D Sbjct: 200 TGNSIRGPSSHQALAGIRSTMGLTSRAGVLPLSMLADIAGPMCRTVEDAARVFQVIVGAD 259 Query: 240 ECDATC----VNLPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLK 293 DA +LP DY AL + ++G +G+ ++ Y D P I + + + LK Sbjct: 260 PDDAVTAAAKAHLPR-DYTAALRRDGLRGAVIGVLRQAYERDTTDPEIVRIFTAAVEDLK 318 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLA-RYDGVRY----GLRVEGKDILEMYE 348 AGA IV+ P T L I P +A + +YD + G RV K++ E+ + Sbjct: 319 RAGATIVD---PATVEGL--TEIRRPRDAGPCMGFKYDLNHFLAARGDRVPVKNLTEIIK 373 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTP 407 + R F + R+ + + R+ R ++ + ++ +D + P Sbjct: 374 SGR---FHPSAQFRLESAEKGPENGPDSPGCVADREYREKVREAVVKTMDRLKLDAFVYP 430 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQ 466 T +G +G Y+ G PAISVP +P G+ + G+ Sbjct: 431 TWSNPPRLIGDLNTPAGDNSQFYSPT-------TGFPAISVPMGYSRGGTLPAGMTIYGR 483 Query: 467 PFREETLFSVGQIIEKEAGYFRP 489 + EE L E+ + RP Sbjct: 484 AWSEEILIQYAYAYEQATHHRRP 506 >gi|288555089|ref|YP_003427024.1| glutaminyl-tRNA synthase [Bacillus pseudofirmus OF4] gi|288546249|gb|ADC50132.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A [Bacillus pseudofirmus OF4] Length = 480 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 145/490 (29%), Positives = 235/490 (47%), Gaps = 47/490 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + + ++++AVEL Y+ I + +++ +EV AA +R G Sbjct: 12 IEELQRMMDLQEVTAVELTRYYLDRIAAYDQNLSSVLEVNPDALHIAAALDAERTRTGKR 71 Query: 69 RDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ +KD TK +HT A + +L+ ++ + +KL GAV+LGK NM E+ Sbjct: 72 SILHGIPVLLKDNIDTKDKLHTSAGALVLEHSYAKKDAFLVKKLRKAGAVILGKTNMSEW 131 Query: 128 A--MGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 A M + N S Y G +P+ KF GGSS GS +A+A AA++GT+T Sbjct: 132 AYFMSTDNMPSGYSSRGGQTENPY----GIGKFDVGGSSSGSGSAIAANFAAAAVGTETS 187 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+S VGIKPT G SR GII + + D AG + RTVRD+ LL + G DE Sbjct: 188 GSILSPSSQNSIVGIKPTVGLISRSGIIPLSHTQDTAGPMARTVRDAVFLLCEMMGMDEE 247 Query: 242 DATCVNLPV-PD-YERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D P PD +AL++ S+ M +G+ +E +D L + ++ + L AGA Sbjct: 248 DLITSVCPYQPDQLLKALNKSSLNEMRIGVVREQVMDLLGEEKREVYETALKQLSRAGAN 307 Query: 299 IV-EISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYEN--TRSI 353 ++ ++++P + Y + E +N+ +Y + + V DI+E EN +++ Sbjct: 308 VIDDVNIPSSTRKWS--YNVLTYEFKANVNKYLSELDSSMSVRTLTDIIEWNENHHEKAL 365 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP-TTPTS 412 +GQ ++I S + + YL+A + D + +G+D +L Sbjct: 366 KYGQS----LLIEADKTSGKLTEKEYLKA------LNEDAYFSATEGIDAVLREHQLDVI 415 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP NN G+ AG P+I+VPA E P+G+ + ++E Sbjct: 416 VFP-----NNLGA----------AIPAKAGYPSITVPAGYTESGEPVGITFTAKAWQEPL 460 Query: 473 LFSVGQIIEK 482 L + + EK Sbjct: 461 LIEIAEAFEK 470 >gi|206563677|ref|YP_002234440.1| amidase [Burkholderia cenocepacia J2315] gi|198039717|emb|CAR55687.1| putative amidase [Burkholderia cenocepacia J2315] Length = 494 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 214/492 (43%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A A E D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAINAIVALRDRDALLAEAAEKDAELAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ R L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYRGWLHGMPQAPKDLAMTKGLRTTYGSPIFRENVPQADSVGVARMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS YG +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G +P+ GR R G+ F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGFRPSQGRVPRWPGVDVFMQQLGIEGPMGRTVGDVAQLLAIQAGYDRNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT--IDKTWQQGISWLKDAGAKIVE 301 + + + LD ++G + ++ YL+ + + G++ L++ G + Sbjct: 257 LSLADDPAVFAQPLDADLRGKRIAWVGDWN-GYLATEAGVLAQCEHGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APDRIWRLWLAHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + ++ +F D I PT FP ++ Sbjct: 360 YEVEGLLALQGAAVFDASVERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVDQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P I+VP + +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVINVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYERAADW 483 >gi|167632782|ref|ZP_02391108.1| amidase family protein [Bacillus anthracis str. A0442] gi|170686405|ref|ZP_02877626.1| amidase family protein [Bacillus anthracis str. A0465] gi|254684662|ref|ZP_05148522.1| amidase [Bacillus anthracis str. CNEVA-9066] gi|254743709|ref|ZP_05201394.1| amidase [Bacillus anthracis str. Kruger B] gi|167531594|gb|EDR94259.1| amidase family protein [Bacillus anthracis str. A0442] gi|170669481|gb|EDT20223.1| amidase family protein [Bacillus anthracis str. A0465] Length = 491 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 146/506 (28%), Positives = 229/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTV 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLTSTAFSEGTLIKLAYAFEQATNH 484 >gi|187920394|ref|YP_001889425.1| indole acetimide hydrolase [Burkholderia phytofirmans PsJN] gi|187718832|gb|ACD20055.1| Amidase [Burkholderia phytofirmans PsJN] Length = 484 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 133/475 (28%), Positives = 206/475 (43%), Gaps = 69/475 (14%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA + A AAA D AR L G+PI +KD T G+ T A + L GF Sbjct: 45 NALTTLELDGALAAARRIDALPAAEKARLPLAGLPIVVKDNINTAGMQTSAGTPALAGFI 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGG 158 P + Q+L D GA++LGK NM E A G S+N ++ GPV +P+ PGG Sbjct: 105 PKTNAPSVQRLIDAGAIVLGKANMHELAFGITSTNLATHAGPVRNPYDP-----SLIPGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISF 211 SSGG++AA+A + A +GTDTGGS R PA+ TGTVG +P+ G ++ Sbjct: 160 SSGGTAAAIAARIVPAGLGTDTGGSTRIPAALTGTVGFRPSVGNGGAERRYHDPDAVVPI 219 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + + D G + RTV D A+L I G +N G+ +G+P Sbjct: 220 SHTRDTVGPMARTVADIALLDGVITGAGALPVVALN---------------GLRIGLPAP 264 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + L ++ + + L+ AG V +++ S L +G Sbjct: 265 L-WEGLERQVEDVARAALRQLEAAGVVFVPVAM-------------------SELDDLNG 304 Query: 332 VRYG---LRVEGKDILE-MYENTRSIGFGQEVKHRI------MIGTYVLSSRCYDSHYLR 381 + G + D+L + N + E+ RI I VLS D + Sbjct: 305 MVGGPIAIHEARDDVLAWLVANDAPVKTVVEMAARIASPDVRAIYDGVLSDVLGDRYEAA 364 Query: 382 ARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNS-----GSMGHIYNDVF- 434 R +++ F ++ +D +L PTT +A P+ + +S GS D F Sbjct: 365 LNHWRPRLQQYMAATFADERLDALLFPTTRLAAVPIDEVNGSSVVSVDGSAAIDTMDAFL 424 Query: 435 --TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T + +G+P +S+PA + +P+GL+L G + L ++G E+ G Sbjct: 425 HNTDPASTSGIPGLSLPAGMTASGLPVGLELDGPLGEDRRLLAIGIAFEQLLGAL 479 >gi|182436310|ref|YP_001824029.1| amidase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464826|dbj|BAG19346.1| putative amidase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 486 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 148/506 (29%), Positives = 225/506 (44%), Gaps = 47/506 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E NF+ E LR+ ++++ EL D I AIE + +NA +ARAAA ++D+ Sbjct: 2 EWNFLTAEELATALRTGEVTSAELTDDAISAIERDDHAINAVCVPDFDRARAAARDADRA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L GIP+ +K+ + G+ T P ++ +L D GAV+LGK Sbjct: 62 RARGEDGPLLGIPVTVKESYNVAGLPTTWGMPEHRNHLPADDAVQVARLKDAGAVVLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ YG +PW D+ TPGGSSGGS+AA+A A SIG+D GG Sbjct: 122 NVPLGLQDIQTFNEIYGTTNNPW----DHDR-TPGGSSGGSAAALASGFGALSIGSDIGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-------SFAPSLDQAGIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G+I + P L G + R+ RD ++LL + Sbjct: 177 SLRTPAHFCGVHAHKPTLGLVADRGMIPPATPALPYGPDLAVVGPMARSARDLSLLLDVM 236 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D A + LP +ER ++ V + E+ L + + L Sbjct: 237 AGPDPLTFGVAHTMTLPPARHER-----LEDFRVLVLDEHPLLPTGAAVRAGVGRVADAL 291 Query: 293 KDAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 D GA + S LP A YY + A ++ ARY E YE Sbjct: 292 ADGGAHVERHSALLPDLAEAATLYYRLLIAASA---ARYSA-------------EEYERL 335 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ G R + + SS C + A R L + + F D ++ P TP Sbjct: 336 RARAAGLSADDRSLSAVRLRSSVCSHRAWAAAHDGRELHRHGWRRFFAD-FDAVVCPVTP 394 Query: 411 TSAFPLGKEEN--------NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 T AFP E + + + ++ V+ M GLP+ +VPA + +P+G+Q Sbjct: 395 TPAFPHDHELDPMERRIDIDGVDVPYLDQLVWAGLATMPGLPSTAVPAGRSPEGLPVGVQ 454 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFR 488 ++G F + T + +++E+ G FR Sbjct: 455 IVGPMFEDRTTLRLAELLERRIGGFR 480 >gi|172063568|ref|YP_001811219.1| amidase [Burkholderia ambifaria MC40-6] gi|171996085|gb|ACB67003.1| Amidase [Burkholderia ambifaria MC40-6] Length = 494 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 130/492 (26%), Positives = 216/492 (43%), Gaps = 42/492 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 ++ E +RSK +S VE + +Y+ IE N +NA + + + A A E D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHIERVNGAVNALVSLRDRATLLAEAAEKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYHGWLHGMPQAPKDLAMTKGLRTTYGSPIFRDNVPQADSVGVGRMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS +G +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVHGATRNPYDLTKSA-----GGSSGGTAAALAARMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G++P+ GR R + F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGLRPSQGRVPRWPAVDVFMQQLGIEGPMGRTVGDVAHLLSIQAGYDPNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + ++LD+ ++G + ++ YL+ P + ++G++ L++ G + Sbjct: 257 LSLADDPAVFTKSLDKDLRGERIAWVGDWN-GYLATEPGVLAQCEKGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APERIWRLWLTHRHL-LSGGGLLAHYRDPARRALLKLEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + ++ +F D I PT FP E+ Sbjct: 360 YEVEGLLAMQGADVFDASIERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVEQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P ISVP + +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRAMDTYHRWMETVVPWTLAGCPVISVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEAGY 486 + + E+ A + Sbjct: 472 QLARGYEQAADW 483 >gi|69218101|gb|AAZ04133.1| N-acylethanolamine amidohydrolase [Medicago truncatula] Length = 607 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 133/488 (27%), Positives = 219/488 (44%), Gaps = 53/488 (10%) Query: 17 RSKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 +S+ ++ + +S I IE + + A + R A S +R +G+ L+ Sbjct: 138 QSRKVTPSMVAESIISMIEENGIDKPPTPLLLSFDAAEVRKQAAASTQRFESGNPLSILD 197 Query: 73 GIPIGIKD---CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 GI I IKD C H + + ++ +L G + +GK NM EF M Sbjct: 198 GIFIAIKDDIDCHPHPSTGGSTWMHEVRDVK--KDAVCVSRLRSCGVIFIGKTNMHEFGM 255 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ S YG +P + D++T GGSS G +A VA LC+A++GTD G S+R P+S Sbjct: 256 GTTGNNSNYGTARNP----HAPDRYT-GGSSSGPAAIVASGLCSAALGTDGGSSVRIPSS 310 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-- 247 G VG+K YGR S G + + +++ G I TV D+ ++ A+ G + + Sbjct: 311 LCGVVGLKINYGRTSMEGSLCDSGTVEVIGPIASTVEDAMLVYAAMLGASPANRISMKPS 370 Query: 248 ---LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 LP + D +++ + +GI + + S + + ++ L A V + Sbjct: 371 TPCLPTLSSDDDTD-ALRSLRIGIYTPWFNNVHSTEVSDKCEDALNLLSKAHGCEVVEVV 429 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + +++S + D +GK + Y+ S+ Q Sbjct: 430 IPEIVEMRTAHLVSIGSECLSSLNPD------IEDGKGVKLSYDTRTSLALFQSFTA--- 480 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PTSAFPLG 417 + Y+ A+ IR I F E F++ VDVI+TPTT P SA G Sbjct: 481 ------------ADYVAAQCIRRRIMHYFMEIFKK-VDVIVTPTTGMTAPRIPPSALKSG 527 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + G++ F V N+ GLPAISVP ++ +P+GLQ+IG+P+ E T+ V Sbjct: 528 --ETDMPTTGYLMR--FVVPANLLGLPAISVPVGYDKEGLPIGLQVIGRPWAEATILRVA 583 Query: 478 QIIEKEAG 485 +EK G Sbjct: 584 AAVEKLCG 591 >gi|1814318|gb|AAB41868.1| IaaH [Agrobacterium vitis] Length = 467 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 146/491 (29%), Positives = 228/491 (46%), Gaps = 49/491 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++ ++++S + LR KD S +ELV++ I E + S +NA + R +A++ D+ Sbjct: 2 VSITSLAQSLEHLRRKDYSCLELVETLIARCEAAKS-LNALLATDWDGLRRSAKKIDR-- 58 Query: 64 INGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G+A L GIP+ K AT T A + L P S V ++L+ GA+ Sbjct: 59 -HGNAGVGLCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAERLFSAGALPGASG 117 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NM E + G ++ G V +PW GGSSGG +AAVA L IGTDTG Sbjct: 118 NMHELSFGITSNNYATGAVRNPWNP-----SLISGGSSGGVAAAVASRLMLGGIGTDTGA 172 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA+ G VG +PT GR R II +P+ D AGII + V D IL + I+G Sbjct: 173 SVRLPAALCGVVGFRPTLGRYPRDRIIPVSPTRDTAGIIAQCVADVIILDQVISGR---- 228 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LP+P ++G+ +G+P Y D L + + I L + G VE Sbjct: 229 -PARILPIP---------LKGLRIGLPTTYFYDDLDADVAFAAETTIRLLANRGVTFVEA 278 Query: 303 SLPHTQ-----YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 +PH + +LP P L + G V D++ RS Sbjct: 279 DIPHLEDXXXGASLPIALYEFPHALKQYLDDFVGT-----VSFSDVI---NGIRSPDVAN 330 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPL 416 VK + + + +SS D + L + R ++ + F +D IL PT P +A + Sbjct: 331 IVKAQ--VDGHQISS---DEYELARQSFRPRLQATYRNYFRLYQLDAILFPTAPLAAKAI 385 Query: 417 GKE---ENNSGSMG--HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 G++ +N +M IY + N AGLP +S+P L ++P+G+++ G + Sbjct: 386 GQDFSVTHNGSTMNTFKIYVRNVDPSSN-AGLPGLSLPVHLTPHRLPVGMEIDGLAGSDH 444 Query: 472 TLFSVGQIIEK 482 L ++G +EK Sbjct: 445 RLLAIGAALEK 455 >gi|30262095|ref|NP_844472.1| amidase [Bacillus anthracis str. Ames] gi|47527364|ref|YP_018713.1| amidase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184936|ref|YP_028188.1| amidase [Bacillus anthracis str. Sterne] gi|65319379|ref|ZP_00392338.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Bacillus anthracis str. A2012] gi|165870157|ref|ZP_02214813.1| amidase family protein [Bacillus anthracis str. A0488] gi|167638449|ref|ZP_02396726.1| amidase family protein [Bacillus anthracis str. A0193] gi|170706002|ref|ZP_02896464.1| amidase family protein [Bacillus anthracis str. A0389] gi|177650949|ref|ZP_02933846.1| amidase family protein [Bacillus anthracis str. A0174] gi|190567840|ref|ZP_03020751.1| amidase family protein [Bacillus anthracis Tsiankovskii-I] gi|227815108|ref|YP_002815117.1| amidase family protein [Bacillus anthracis str. CDC 684] gi|229600745|ref|YP_002866456.1| amidase family protein [Bacillus anthracis str. A0248] gi|254720993|ref|ZP_05182784.1| amidase [Bacillus anthracis str. A1055] gi|254751422|ref|ZP_05203459.1| amidase [Bacillus anthracis str. Vollum] gi|254758294|ref|ZP_05210321.1| amidase [Bacillus anthracis str. Australia 94] gi|30256721|gb|AAP25958.1| amidase family protein [Bacillus anthracis str. Ames] gi|47502512|gb|AAT31188.1| amidase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178863|gb|AAT54239.1| amidase family protein [Bacillus anthracis str. Sterne] gi|164714045|gb|EDR19566.1| amidase family protein [Bacillus anthracis str. A0488] gi|167513750|gb|EDR89119.1| amidase family protein [Bacillus anthracis str. A0193] gi|170129004|gb|EDS97869.1| amidase family protein [Bacillus anthracis str. A0389] gi|172083410|gb|EDT68471.1| amidase family protein [Bacillus anthracis str. A0174] gi|190560895|gb|EDV14869.1| amidase family protein [Bacillus anthracis Tsiankovskii-I] gi|227007453|gb|ACP17196.1| amidase family protein [Bacillus anthracis str. CDC 684] gi|229265153|gb|ACQ46790.1| amidase family protein [Bacillus anthracis str. A0248] Length = 491 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 146/506 (28%), Positives = 229/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTV 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQATNH 484 >gi|170700661|ref|ZP_02891658.1| Amidase [Burkholderia ambifaria IOP40-10] gi|170134433|gb|EDT02764.1| Amidase [Burkholderia ambifaria IOP40-10] Length = 508 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 26/439 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I+G A L G + +KD G+ + + +G+ P ++TV ++ D GA + Sbjct: 77 KSTIHGAADGKLRGKTVAVKDNICVGGVPMRNGASTFEGYVPDVDATVVTRMLDAGATIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + + + TS GPV++P ++ S SS GS A +A ++G+D Sbjct: 137 GKSTCEYYCFSGGSHTSASGPVLNPRKAGHSAGG-----SSSGSGALIASGEVDMALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R P+++ G G+KPT+G G + ++D G +T V D+A+LL IAG D Sbjct: 192 QGGSVRIPSAYCGVYGMKPTHGLVPYTGAMPIEATVDHLGPMTNNVLDNALLLDVIAGDD 251 Query: 240 ECDATCVNLPV-PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 D LP DY A+ I G+ +GI +E + L +D+ L+ GA Sbjct: 252 GLDPRQRALPPRADYLGAIRDGIAGLRIGILREGFGLANSEAVVDEAVLVAAHRLRQLGA 311 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRS 352 K+ E+S+P + I+ A+ + + G +G G + M ++ R+ Sbjct: 312 KVDEVSVPLHATGTAIWLPIAAEGATQQMMK--GNSHGFNWGGLYVTGMIDHHAGWRERA 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 VK +++G Y +SR +Y + + + ++ D+ A Q D++L PT P Sbjct: 370 DELPDTVKVTMLLGEY-FTSRYRGRYYAKCQNLARRLRADYDTAL-QSYDLLLMPTVPIR 427 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQP 467 A K +M F + N A G PA+S+P + E +P+GLQL+G+ Sbjct: 428 A---SKLPEPGCAMSESLTRAFEMLANTAPFDVSGHPAMSLPCGIAE-DLPIGLQLVGRR 483 Query: 468 FREETLFSVGQIIEKEAGY 486 F E T++ E+ + + Sbjct: 484 FDEATIYRCAYAYEQSSDW 502 >gi|154248575|ref|YP_001419533.1| amidase [Xanthobacter autotrophicus Py2] gi|154162660|gb|ABS69876.1| Amidohydrolase AtzE type [Xanthobacter autotrophicus Py2] Length = 482 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 138/473 (29%), Positives = 220/473 (46%), Gaps = 41/473 (8%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPI 76 S ++A ++++ + I + ++NA+ ++ A++ARA+A+ D R G L G P Sbjct: 32 SGAVTARAMIEATLARIAAVDPKVNAFTDLTAERARASADRIDARRAAGAPLGPLAGAPF 91 Query: 77 GIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +K+ F KG+ T+A S I P ++T+ KL AV++G LNM E+A + E Sbjct: 92 AVKNLFDVKGLPTRAGSKINRDLSPADGDATLIAKLEAADAVLVGALNMGEYAYDFTGEN 151 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + G +P T SSGGS AAVA L ++G+DT GSIR P+S GT G Sbjct: 152 VHDGASRNPHDLTRMTGG-----SSGGSGAAVAAGLVPIALGSDTNGSIRVPSSLCGTFG 206 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR +R G F +LD G + R+V D A A+ G D D P Sbjct: 207 LKPTYGRLTRGGSFPFVTALDHLGPLGRSVADLAAFYDAMQGEDARDPGQTPRPFEPVSG 266 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + Q G+ + I + + S + + + G V + +P A + + Sbjct: 267 LIGQGADGLRIAIAGGW---FRSRALPEAFAAVDHVAASLGVTQV-VDIPDAARARASAF 322 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 II+ AE +S AR R R E F V+ R+ G + +S Sbjct: 323 IITAAEGASLHAR----RLAARAE--------------DFDPAVRDRLFAGLAIPAS-WV 363 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIYND 432 D+ A++ R + + F Q DV+L PTTP+ A LG++ + + Sbjct: 364 DA----AQRFRRHFHGEMMKLF-QTHDVLLAPTTPSRAPKLGQKTFVLDGEEMLVRPNMG 418 Query: 433 VFTVAVNMAGLPAISVPA---ALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +FT ++ GLP ++VP A ++PL +Q+I P+RE+ V +E+ Sbjct: 419 LFTQPISFIGLPVVAVPVRVDAGDAPELPLAVQVIAPPWREDLALRVAATLER 471 >gi|323490686|ref|ZP_08095888.1| amidase [Planococcus donghaensis MPA1U2] gi|323395568|gb|EGA88412.1| amidase [Planococcus donghaensis MPA1U2] Length = 485 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 140/494 (28%), Positives = 224/494 (45%), Gaps = 54/494 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59 +L + + + +++VELV +Y I+A + + ++N+ + + + AA+ Sbjct: 7 KLTETTIQDIQQAFHDNKLTSVELVQAYLDRIEAFDQNGPKINSILTINPDALKIAAQLD 66 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +KR + L GIP+ +KD T + T A + L+ ++ V ++L + GA++ Sbjct: 67 EKRGQDNQGP-LYGIPVLLKDNIETADPMPTTAGAIALEHNFAKEDAFVAKQLRNAGAII 125 Query: 119 LGKLNMDEFAM-----GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 LGK+N+ E+A G S +S G V++P+ + GGSS G+ AA+A Sbjct: 126 LGKVNLSEWAYFMSQDGPSGYSSLGGQVLNPY-GIGVFKAEDVGGSSSGTGAAIASNFAV 184 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 +GT+T GSI PAS VGIKPT G SR II A S D AG + RTV D+AILL Sbjct: 185 VGVGTETSGSILSPASANSIVGIKPTVGLISRSRIIPIAESQDTAGPMARTVTDAAILLG 244 Query: 234 AIAGYDECDATC---VNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 A+ G DE D+ + DY L + + G +G+ + L+ +P + I Sbjct: 245 AMTGVDEQDSATQKSTGQALTDYTPHLKKDGLDGARIGVDLNF-LNNEAPEERAIMDEAI 303 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-----DGVRYGLRVEGKDIL 344 +K GA +VE+++P + + + E + Y D V V D++ Sbjct: 304 EQIKALGATVVEVTIPKSSFQSDVLWY----EFKRTVNDYLRTTPDAVPVKSLV---DVI 356 Query: 345 EMYEN--TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 E + R + FGQ + + +LS DS YL RK D + +G+D Sbjct: 357 EFNKQDPERRMKFGQAELEK----SQILSDDPNDSTYLEHRKT------DLRSSTSEGLD 406 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 +I T A +NN G+ AG P+I+VPA P+G+ Sbjct: 407 LI-TQEHQLDALLF---QNNRGA----------AMPAKAGYPSITVPAGYASSGHPVGVT 452 Query: 463 LIGQPFREETLFSV 476 Q F E L + Sbjct: 453 FSAQAFSEARLIEL 466 >gi|254459756|ref|ZP_05073172.1| amidase [Rhodobacterales bacterium HTCC2083] gi|206676345|gb|EDZ40832.1| amidase [Rhodobacteraceae bacterium HTCC2083] Length = 790 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 130/493 (26%), Positives = 222/493 (45%), Gaps = 44/493 (8%) Query: 16 LRSKDISA-VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-------- 66 L +D+S E+++ Y+QA + ++ + EV ++ + + +N Sbjct: 309 LSDQDLSEYTEIIEPYMQAYDRLDAMPDNLPEVRYPRSPGRFPDPSENPLNAWYVKTEVR 368 Query: 67 ---DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 D + L G I +KD G+ S I++G+ P ++T+ ++ D GA++ GK + Sbjct: 369 GAPDGK-LRGKRIALKDTICLAGVPLMNGSSIMEGYTPEIDATIVTRMLDAGAIIAGKAH 427 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + F + + T+ GP+ +P++ + GGSS GS+A VA +I D GGS Sbjct: 428 CENFCLSGGSHTNAKGPIHNPYKR-----GYMAGGSSAGSAALVAAGEVDMAIAGDQGGS 482 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PAS G G+KPT+G G + ++D G IT TV D+A+LL+ +AG D D Sbjct: 483 IRIPASNCGCYGMKPTHGLVPYTGAMPIEQTIDHLGPITNTVADNALLLEVLAGEDGLDP 542 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT----IDKTWQQGISWLKDAGAKI 299 V Y L + GM +G+ E + P +DK Q I ++ GA + Sbjct: 543 RQYKPKVYSYTEVLGRGAHGMRIGVLSE---GFGHPNSEVDVDKKVMQAIERFRELGAHV 599 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQE 358 ++S+P A+ A+ I+ + G G G + M ++ + G E Sbjct: 600 EDVSVPEHHTAMDAWTAITLEGLQDGMMW--GNSTGTNYRGLFLPSMTDHMAQWKGRADE 657 Query: 359 VKHRIMIGTYV---LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + H + +V + Y +A+ I + A +Q D++L PT P Sbjct: 658 LSHSLKACMFVGEHFQQQYRGRFYGKAQNIMRRCNERYLAALKQ-YDLLLMPT-----LP 711 Query: 416 LGKEENNSG--SMGHIYNDVFTVAVNMA----GLPAISVPAALCEKKMPLGLQLIGQPFR 469 + +E+ S+G F + N A GLPA+S+P E +P+GLQL+G + Sbjct: 712 IKPQEHPPADCSLGLYVQRAFEMVPNTAPFNGGLPAMSIPCGFSE-GLPIGLQLVGPHYG 770 Query: 470 EETLFSVGQIIEK 482 E ++ E+ Sbjct: 771 EMKIYQAAHAFEQ 783 >gi|87302220|ref|ZP_01085045.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. WH 5701] gi|87283145|gb|EAQ75101.1| Glutamyl-tRNA(Gln) amidotransferase A subunit [Synechococcus sp. WH 5701] Length = 186 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 92/190 (48%), Positives = 124/190 (65%), Gaps = 6/190 (3%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E R +L ++SA EL D ++ IE +++++EV A++ARA A+ D G Sbjct: 1 MGIAEWRGQLERGEVSARELTDQHLARIEAVEGTLHSFLEVTAERARADADRIDAARAAG 60 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD TKGI T S +L+ F P YESTVT++LW G +++GK N+D Sbjct: 61 ETLPPLAGIPLAIKDNLCTKGIRTTCSSRMLEQFVPPYESTVTERLWQAGGILIGKTNLD 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFAMGSS ETS +GP +PW + PGGSSGGS+AAVA C AS+G+DTGGSIR Sbjct: 121 EFAMGSSTETSAFGPSRNPW-----NPERVPGGSSGGSAAAVAAGECVASLGSDTGGSIR 175 Query: 186 QPASFTGTVG 195 QPA+F G G Sbjct: 176 QPAAFCGGGG 185 >gi|330950561|gb|EGH50821.1| amidase [Pseudomonas syringae Cit 7] Length = 467 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 143/486 (29%), Positives = 220/486 (45%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + AIE NS +NA+ +V A+ A AE + G+ Sbjct: 4 VIEAATLVREGGLTPIRLTELCLSAIETHNSTLNAFGDVYAEAALEQAEGMTAELQRGEV 63 Query: 69 R-DLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 R L G+P GIKD F+T G+ T+ LD P ++ + ++L + GA++LGK E Sbjct: 64 RGPLHGVPFGIKDLFSTAGLRPTRGSLTALDSV-PAQDAPIIRRLKNAGAIILGKTATTE 122 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R Sbjct: 123 FGWTGASTSRVFGNGRNPWDP-----NLTSGGSSSGSAIAVAARMVPAALGSDGGGSVRI 177 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P SF G +K T GR S L AG ITRTVRDSA+L ++G D D Sbjct: 178 PGSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQA- 235 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP PD E L + Q + K R+ + D ++ DA + SLP Sbjct: 236 -LPAPD-ESFLARCDQPL-----KPLRIGFCPTLFDTPVDAQVAAAVDAAVGNIARSLPV 288 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG + K L+ + GF +K Sbjct: 289 TVSILKPDWHDPLATFETLWVAGRGIAYGKALAQK--LDQLDP----GFADLIKR----- 337 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S++ S YL+A + R FE D++L PT P F P+G Sbjct: 338 ----SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLLMPTLPILPFAADDVAPVGYAG 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + G++ FT N+ G PA ++P +++P+GLQ++G F + + + Sbjct: 393 QD-GAVPWARWTPFTYPFNITGNPAANLPCGWSSERLPIGLQVVGPRFADAQVLQFCAAV 451 Query: 481 EKEAGY 486 E A + Sbjct: 452 EAIAPW 457 >gi|68075635|ref|XP_679737.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Plasmodium berghei strain ANKA] gi|56500553|emb|CAH98573.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Plasmodium berghei] Length = 564 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 138/471 (29%), Positives = 214/471 (45%), Gaps = 76/471 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI +KD TKGI T A S IL ++ Y+STV +KL +GA+++GK +DEFAMG Sbjct: 84 LFGLPIALKDNIITKGIPTTAGSKILSNYKSSYDSTVVKKLKKHGAIIIGKTRLDEFAMG 143 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPAS 189 S G V +P+ +K+ G S G SA+ G + S+ TDTGGSIR PA+ Sbjct: 144 SCT-----GNVKNPF-----NEKYLSCGGSSGGSASCVGSKILNCSVNTDTGGSIRTPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-- 247 G +G+KPTYGR SR GII + D G+I V D +ILL ++GYD+ D V+ Sbjct: 194 LCGCIGLKPTYGRISRYGIIPYNEETDVVGLIVNNVYDCSILLDCLSGYDKNDLKSVHTK 253 Query: 248 -LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT----------WQQGISWLKDAG 296 + +QS + K + YLS + K + + +KD G Sbjct: 254 KKKYYFLLKKYEQSEIFKSEKPLKNMKFGYLSKDLLKRYFVDDVVCDHYDMVMKNIKDMG 313 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++ ++ YY+ S A+SN+AR +G+ Y + + + + RS Sbjct: 314 GILINTNIYKLVEYCYIYYMYSMIVANSNIARMNGINYNIPNINNENNFITK-LRSNLID 372 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD----FTEAFEQGVDVILTPTTPTS 412 + V RI+ G+ + S ++ + R++ +IK + FE V+ IL P+ P S Sbjct: 373 ENVLARIIGGSIISSYFEKNNKKINFRRVFLVIKNKLISRLNKIFEH-VNFILLPSLPRS 431 Query: 413 -------------AFP--------LGKE-------------------ENNSGSMGHIYN- 431 +F L K+ EN++ S ++YN Sbjct: 432 NNIKEDCNMDISLSFEKYLKNKTNLEKKYFDNINMNNDNNNKNYFCIENDNISNKYMYNK 491 Query: 432 ---DVFTVAVNMAGLPAISVPAALCEKKM--PLGLQLIGQPFREETLFSVG 477 ++F V ++ G P+I +P K + P QL+ E L V Sbjct: 492 YMREIFLVISSITGFPSIVIPTGEFTKNLNEPQSFQLLNSKLNEHELLKVA 542 >gi|300118221|ref|ZP_07055969.1| amidase [Bacillus cereus SJ1] gi|298724532|gb|EFI65226.1| amidase [Bacillus cereus SJ1] Length = 491 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 143/466 (30%), Positives = 211/466 (45%), Gaps = 57/466 (12%) Query: 40 QMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATK-GIHTQACSHILDG 98 ++N+ +E+ A +R I G L GIP+ +KD T +HT A + L+ Sbjct: 49 KINSILEINPDAIFIAEALDHERKIKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQ 108 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDK 153 ++ + KL + GAV+LGK NM E A S E ++ G I+P+ + D D Sbjct: 109 HISSEDAFLVTKLREAGAVILGKTNMTELANAMSFEMWAGYSARGGQTINPYGTGD--DD 166 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSS GS+ AVA S+GT+T SI PA VGIKPT G SR GII F Sbjct: 167 MFVGGSSTGSAIAVAANFTVVSVGTETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTY 226 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATC---VNLPVPDYERALD-QSIQGMTVGI- 268 S D AG RTV D+AILL ++ G DE D + DY + LD + G +G+ Sbjct: 227 SQDTAGPFARTVTDAAILLGSLTGLDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVY 286 Query: 269 ---PKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAE 321 PKEY Y S D K +++ I L+ GA +VE I +P H +++ + +S E Sbjct: 287 SNAPKEY---YESGEYDEKLFKKTIEVLRSEGATVVEDIDIPSFHREWS----WGVSLYE 339 Query: 322 ASSNLARY-DGVRYGLRVEG-KDILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDS 377 +L Y + + V +++E EN R++ +GQ R + + + Sbjct: 340 LKHSLDNYLSKLPSTIPVHSISELMEFNENIAERALKYGQTKLER----RKDVPNTLRNP 395 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTV 436 Y+ AR D + EQG+D L + FP + + + Sbjct: 396 EYINAR------LEDIYFSQEQGIDFALEKYNLDAILFP---------------SYIGST 434 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 AG P+I++PA E P G+ L F E TL + E+ Sbjct: 435 ICAKAGYPSIAIPAGYMESGRPFGITLASTAFSEGTLIKLAYAFEQ 480 >gi|163846181|ref|YP_001634225.1| amidase [Chloroflexus aurantiacus J-10-fl] gi|222523928|ref|YP_002568398.1| amidase [Chloroflexus sp. Y-400-fl] gi|163667470|gb|ABY33836.1| Amidase [Chloroflexus aurantiacus J-10-fl] gi|222447807|gb|ACM52073.1| Amidase [Chloroflexus sp. Y-400-fl] Length = 473 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 129/485 (26%), Positives = 224/485 (46%), Gaps = 45/485 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 +R + +SA E++ ++++ I N +NA + + A+A A D+ + GD L G+ Sbjct: 18 IRQRAVSATEVLVAHLERIATLNPLVNAIVTLDIDGAQARARAVDEALARGDDPGPLAGL 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ KD TKG+ T S I F P +++ + +L GAV +GK N EF GS Sbjct: 78 PVAHKDLAETKGMRTTYGSPIFADFVPDFDALIVARLKAAGAVTVGKTNTPEFGAGSQTF 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +GP +P+ + GGSSGG++ A+A + A + G+D GGS+R PA + V Sbjct: 138 NPVFGPTRNPYDLSKTC-----GGSSGGAAVALACGMIAIADGSDLGGSLRNPAGYCNVV 192 Query: 195 GIKPTYGRCSRL-GIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR F P ++D G + RTV D A++L+AIAG D ++ P Sbjct: 193 GFRPSPGRVPVWPDPTPFLPFAID--GPMARTVADIALILQAIAGPDLRAPLSISEPPSL 250 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + + L++ ++G+ + + D +D + I+ +D +I I Sbjct: 251 FAQPLERDLRGVRIA----WSPDLGGLPVDLRVAEVIAAQRDVFTQIGCIV--------- 297 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI--MIGTYVL 370 EA+ +L+ D V +R YE T +E +HRI + + Sbjct: 298 -------EEATPDLSDADEVFQVMRA------FRYELTLGELLDRE-RHRIKDTVVWNIE 343 Query: 371 SSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK----EENNSGS 425 + R + RA ++ + E F Q + I+ P + FP+ + E N Sbjct: 344 AGRALSGPQVGRAMRLHAALLARVYE-FMQTYEFIIAPVSQVPPFPVEQPYITEINGIPM 402 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +I +++ LPAISVPA +P+G+Q+IG+P + ++ + E+ Sbjct: 403 QNYIEWMRSCYYISVCNLPAISVPAGFTRDGLPVGIQIIGRPRADLSVLQLAYAFEQATQ 462 Query: 486 YFRPH 490 +++ H Sbjct: 463 HWQRH 467 >gi|254737106|ref|ZP_05194810.1| amidase [Bacillus anthracis str. Western North America USA6153] Length = 491 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 146/506 (28%), Positives = 229/506 (45%), Gaps = 60/506 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEDEKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIILFTYSQDTAGPFARTVTDAAILLGSLTV 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PKEY Y S D K +++ Sbjct: 251 VDEKDVATHKSKGIAEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YESGEYDEKLFKKT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDI 343 I L+ GA +VE I +P H +++ + +S E +L Y + + V ++ Sbjct: 308 IEVLRSEGATVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISEL 363 Query: 344 LEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E EN R++ +GQ R + + + Y+ AR D + EQG+ Sbjct: 364 MEFNENIAERALKYGQTKLER----RKDVPNTLRNPEYINAR------LEDIYFSQEQGI 413 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D L + FP + + + AG P+I++PA E P G Sbjct: 414 DFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMEGGRPFG 458 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 + L F E TL + E+ + Sbjct: 459 ITLASTAFSEGTLIKLAYAFEQATNH 484 >gi|321311006|ref|YP_004193335.1| aspartyl-tRNA/glutamyl-tRNA amidotransferase subunit A [Mycoplasma haemofelis str. Langford 1] gi|319802850|emb|CBY93496.1| aspartyl-tRNA / glutamyl-tRNA amidotransferase subunit A [Mycoplasma haemofelis str. Langford 1] Length = 477 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 116/423 (27%), Positives = 197/423 (46%), Gaps = 28/423 (6%) Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 G+KD + S L G+ P +TV + L G++ L N+DEF +G + + Sbjct: 63 GLKDLISNTETQVTGGSKFLIGYTPPISATVYKILKKCGSINLVNTNLDEFGLGGTGLSG 122 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 Y G V +P + ++ GGSS GS+ +A L SI +DTG S R PAS TG G Sbjct: 123 YAGEVRNP-----NDEERIIGGSSSGSAYLIAKGLVDFSIASDTGDSARFPASCTGIYGF 177 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KP+YG SR G F +D I+ ++ A + I+ D D T + + +Y ++ Sbjct: 178 KPSYGMISRYGFFPFCSQMDTPSIMASSLETIAAVFSEISVPDPKDLTTLRVSKFNYLKS 237 Query: 257 LDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA----GAKIVEISLPHTQYAL 311 L + + + + + K+ + L+ + + LKD G ++ + +L Sbjct: 238 LSKPFKKPIKIAVFKDLFPENLNSEATEVKESFSKLLKDLSKVDGIQVQVLDFNRDLLSL 297 Query: 312 PA--YYIISPAEASSNLARYDGVRYGL----------RVEGKDILEMYENTRSIGFGQEV 359 + Y +++ +E+ SN A G+ + + G++ E+ N R G E Sbjct: 298 CSLIYSVVAWSESISNYANLTGLLFPFHKDPELSIFKKQNGQNYEEILLNNRK-DLGDEF 356 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R M+G Y L Y+ YL+++K+ +LI + + F + D++L+PTT S PL KE Sbjct: 357 VFRQMMGMYFLDGENYEGLYLKSKKLISLINLEMEKLF-KSYDLVLSPTT-LSIPPLAKE 414 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 I N + N LPAIS+P + K MP+GL ++ ++E L + Sbjct: 415 VKRGYRPNAIQN--ILLLANFCSLPAISIP-WIKVKDMPVGLHIMAAFKKDEFLLMAAKH 471 Query: 480 IEK 482 +++ Sbjct: 472 LQQ 474 >gi|149182568|ref|ZP_01861039.1| amidase [Bacillus sp. SG-1] gi|148849704|gb|EDL63883.1| amidase [Bacillus sp. SG-1] Length = 487 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 152/500 (30%), Positives = 234/500 (46%), Gaps = 53/500 (10%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 +SE D+L + +I++ +LV Y I ++ S +N+ IEV AA +R Sbjct: 19 ISELNDKLHTGEITSHDLVLMYLGRIAEVDQSGPSINSLIEVNPDALHIAASLDYERKTK 78 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIP+ IKD T +HT A S L ++ + +KL + GA++LGK N+ Sbjct: 79 GSRGPLHGIPVVIKDNIDTGDNMHTSAGSLALAESYAKEDAFLVKKLREAGAIILGKTNL 138 Query: 125 DEFA--MGSSNETSYY---GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A M T Y G V++P+ + F GGSS GS+AA+A L S+GT+ Sbjct: 139 TEWANFMAEKMPTGYSSRGGQVLNPYGA-----DFMVGGSSAGSAAAIAANLAVVSVGTE 193 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS VGIKPT G SR G+I + + D AG + RTV D+A+LL+A+ G D Sbjct: 194 TSGSILSPASQNSLVGIKPTVGLISRTGVIPISHTQDTAGPMARTVTDAAVLLQALQGVD 253 Query: 240 ECDATCVN--LPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 + DA + L DY L+ +QG +GI + DYL + + L + G Sbjct: 254 KKDAITASNELLETDYTGHLLESGLQGKRIGIARSTYFDYLDESKLAIMNAAVEKLAELG 313 Query: 297 AKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENT--RS 352 A++V+ + +P T+ ++ +A N A V L + DI+ T + Sbjct: 314 AEVVDSVEIPSTEADWDINVLLYEFKAGIN-AYLKTVDPSLGIRNLSDIIRFNTETGEPA 372 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAF--EQGVDVILTPTT 409 + +GQ+V + D YLR+ K + L K++ +A E +D I+ P Sbjct: 373 LKYGQKVMEE-----SEETKGLIDPLYLRSLEKDQYLSKKNGIDAVLKEHQLDAIVFP-- 425 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 NN G+M AG P+I+VPA + P+G+ G + Sbjct: 426 -----------NNFGAM----------IPAKAGYPSITVPAGFTPEGEPVGITFTGGAYS 464 Query: 470 EETLFSVGQIIEKEAGYFRP 489 E +L E+ + +P Sbjct: 465 EPSLIEAAFAYEQGTKHRKP 484 >gi|148252308|ref|YP_001236893.1| amidase [Bradyrhizobium sp. BTAi1] gi|146404481|gb|ABQ32987.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] Length = 475 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 147/476 (30%), Positives = 226/476 (47%), Gaps = 50/476 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPI 76 ++ +SA E ++ + I + +NA+ +V A++ARA A E D I G + L G+P Sbjct: 21 TRKLSAKEATEAALSRIAARDGVLNAFTDVTAERARAKAAEIDAAIAAGKSVGPLAGVPF 80 Query: 77 GIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +K+ F +G+ T+A S I P ++T+ ++ GAV++G LNM E+A + E Sbjct: 81 AVKNLFDVEGLPTRAGSKINRDRAPAARDATLIARMEAAGAVLVGALNMGEYAYDFTGEN 140 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + GP +P D T GSSGGS +AV G L ++G+DT GSIR P+SF G G Sbjct: 141 VHDGPSRNPH---DPTRMSG--GSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCGIFG 195 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPTYGR SR F SLD G R+V D A+ A+ G D DA C P Sbjct: 196 LKPTYGRLSRARSFPFVMSLDHLGPFARSVEDLALAYDAMQGPDPDDAACTTRPAEPVSG 255 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L Q + G+ +G+ + L P + + + LK +++E+ P A A Y Sbjct: 256 LLSQELDGLRIGLAGGHFQTNLFPEAAEAVARVAAALKV--TEVIEV--PEAARARAAAY 311 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 +IS E +S D +R TR F V+ R++ G + + Sbjct: 312 VISTTEGAS--LHLDRLR----------------TRPHDFDPAVRDRLIAGAMI-PAPLV 352 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--------EENNSGSMG 427 D RA+K R + E F VDV++ P TP A LG+ E ++G Sbjct: 353 D----RAQKFRRWYRAKVLELFTS-VDVLIAPATPCIAPKLGQATFMLDGVELPVRANIG 407 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + T ++ GLP ++VP L + MP+G+Q+I P+ E V +++ Sbjct: 408 -----IHTQPISFIGLPVVAVPIPL--EPMPIGVQIIAAPWCEHVALRVAHALQQR 456 >gi|229591420|ref|YP_002873539.1| putative amidase [Pseudomonas fluorescens SBW25] gi|229363286|emb|CAY50388.1| putative amidase [Pseudomonas fluorescens SBW25] Length = 468 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 146/488 (29%), Positives = 213/488 (43%), Gaps = 41/488 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ + + R+K +S V++ + + IE N +NAY V + A AA S+ Sbjct: 1 MSEIGQLTAVQLLQHFRNKTLSPVDVTEDALLRIERYNPVVNAYCHVDPEGALKAARASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 +R +NG L+G+P IKD T G+ T+ SH P ++ T + GAV+ Sbjct: 61 QRWLNGQPCGALDGVPASIKDLTLTVGMPTRKGSHTTSAEGPWDIDAPFTAFMRKAGAVL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK EF + YG +PW + + SSGG+ AA A L G+ Sbjct: 121 LGKTTTPEFGWKGVTDNPLYGITRNPWDTCTTAGG-----SSGGAGAAAALNLGVLHQGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P +FTGT GIKPT+G + + L G +TRTV DS ++L+ IA Sbjct: 176 DAGGSIRIPCAFTGTFGIKPTFGYVPQWPASAMT-LLSHLGPMTRTVEDSVLMLQTIAQP 234 Query: 239 DECDATCVNLP--VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D + P P A D ++G+ V + + P + K Q + L+ G Sbjct: 235 DTRDG-LIGAPRTTPWLSGAAD--LKGLRVAYSPNFGYVDVDPQVAKVVAQAVRGLEQLG 291 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY-GLRVEGKDILEMYENTRSIGF 355 A + +I P + P E S L R G E + L R Sbjct: 292 AHVEQID--------PGFS--DPLEVFSTLWAAGAARLTGPMSEAQKQLLDPGLLRIAQR 341 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+ LS ++S L AR L+ R AF + DV+++P P +AF Sbjct: 342 GER-----------LSLNDFNS-ALEARA--ALVAR--MAAFHEHYDVLVSPMMPITAFE 385 Query: 416 LGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G + SG FT N+ PA SVP L +P+GL ++G F +E + Sbjct: 386 AGHDVPPGSGLQEWTQWTPFTYPFNLTQQPAASVPCGLAANGLPVGLHVVGARFADEQVL 445 Query: 475 SVGQIIEK 482 V Q+ K Sbjct: 446 RVCQVYAK 453 >gi|226225641|ref|YP_002759747.1| putative amidase [Gemmatimonas aurantiaca T-27] gi|226088832|dbj|BAH37277.1| putative amidase [Gemmatimonas aurantiaca T-27] Length = 483 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 142/507 (28%), Positives = 222/507 (43%), Gaps = 64/507 (12%) Query: 16 LRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 ++ +++ L ++Y I A++ + + + +E AAE +R L Sbjct: 1 MQRGSLTSTALTEAYLARIAAVDAAGPTLRSVLETNPDALTIAAERDAERKAGKVRGPLH 60 Query: 73 GIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ +KD T + T A S L G ++ V KL + GAV++GK N+ E+A Sbjct: 61 GIPVLVKDNLDTGDRMQTTAGSLALVGTPATRDAHVVAKLREAGAVIIGKTNLSEWANFR 120 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S +S P GSS G+ A+A L IGT+T GSI P+S Sbjct: 121 STRSSSGWSGRGGQTKHPYVLDRNPCGSSSGTGTAIAANLATVGIGTETDGSIICPSSIC 180 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 G VG+KPT G SR GII + + D AG +TR+V D+A LL+AIAG DE D + P Sbjct: 181 GLVGLKPTVGLVSRAGIIPISATQDTAGPMTRSVSDAAALLQAIAGRDEQDPSTSAAPAA 240 Query: 250 VPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PDY AL + +++G +G+ + L +P D + + I L+ AGA IV+ Sbjct: 241 TPDYAAALVKGALKGARIGVGRN--LAGFNPAADAAFNKAIDTLRAAGAVIVD------- 291 Query: 309 YALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 PA + + +YD + L E KD L Y +R G+ V H+ + Sbjct: 292 ----------PANVPT-VGKYDDAEFQVLLYEFKDGLNRYLASR----GETVSHKTLAAL 336 Query: 368 YVLSSRCYDSH--------YLRARKIRTLIKRDFTEAF--------EQGVDVILTP---- 407 + D+ + +A L + A EQG+D + Sbjct: 337 IAYNREHADTEMPWFAQEIFEQAEAKGPLTDAAYRNALELCRRASREQGLDALFREHQLD 396 Query: 408 --TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 P++A + N G Y+ + +AG P+++VP A +PLG+ IG Sbjct: 397 ALVAPSNAPSWVTDHVN----GDKYSGGNSSVAAVAGYPSLTVPMAYVH-GLPLGISFIG 451 Query: 466 QPFREETLFSVG-----QIIEKEAGYF 487 + E L G Q++ ++A F Sbjct: 452 LAWSEAKLLGYGYDFEQQVMARQAPKF 478 >gi|282895424|ref|ZP_06303561.1| Amidase [Raphidiopsis brookii D9] gi|281199457|gb|EFA74320.1| Amidase [Raphidiopsis brookii D9] Length = 458 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 135/497 (27%), Positives = 224/497 (45%), Gaps = 53/497 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L F E +R +++S +EL + Y+ I N Q+ +Y V+A A A + Sbjct: 1 MTDLAFTPALELARLIRGREVSPLELTELYLDRISRFNPQLGSYFTVMADSAIADSRYKT 60 Query: 61 KRIINGDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 + + N +L G+PI IKD A G+ + L P+Y+ V K+ G V Sbjct: 61 ETLANTKETELPPFFGVPISIKDLNAVAGVACTFGNPALLNNIPNYDDGVVTKIKQAGFV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK E E + + P +PW ++TPGGSSGG+++AVA LCA + G Sbjct: 121 ILGKTATSELGSYPYTEPAGFPPARNPWNL-----EYTPGGSSGGAASAVAAGLCAIAQG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GGSIR PA+ G VGIKP GR + S ++ +G + RTV D+A +L AI+G Sbjct: 176 SDGGGSIRVPAACCGLVGIKPARGRVTNAPGTS---TIATSGPLARTVADAAAMLDAISG 232 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG----ISWLK 293 Y D ++ P P + + + G+ V + + D QQG + L+ Sbjct: 233 YFPGDPFWLSNPEPSFLASTQEKTPGLRVAF--STSISSIG-EADANCQQGVLKAVQLLE 289 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + G ++VE + P + A+S + + IL+ Sbjct: 290 ELGYEVVEKCPDISGLVKPFQIVWQAGVAASGIPAH-------------ILQ-------- 328 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 + ++L YL+A ++ R F+Q +D+++ P SA Sbjct: 329 ----------PLNQFLLERTGSAGEYLKAVTQMQILSRQIVSFFDQ-IDILVLPVYLHSA 377 Query: 414 FPLGK--EENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +G+ + ++ I N + + N GLPAI++P ++ +PL +QL+G+P E Sbjct: 378 MKIGEWSQLKPDETLQKIINWIAPCPLANATGLPAIALPMGFDDQGLPLSVQLVGKPAAE 437 Query: 471 ETLFSVGQIIEKEAGYF 487 L S+ +E Y Sbjct: 438 AMLISIAAQLEVSNPYL 454 >gi|162449768|ref|YP_001612135.1| putative amidase [Sorangium cellulosum 'So ce 56'] gi|161160350|emb|CAN91655.1| putative amidase [Sorangium cellulosum 'So ce 56'] Length = 513 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 152/497 (30%), Positives = 228/497 (45%), Gaps = 49/497 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +SEL + + D +R K +S++E+V++++ I N ++NA +++ A +ARA A +D Sbjct: 53 LSELTRASGGQLADLIRRKRVSSLEVVEAHLARIAKINPRLNAVVKLRADEARAEARAAD 112 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K + G L G+P+ IKD T G+ T + F P ++TV ++L + GA++L Sbjct: 113 KALARGKPLGPLHGVPMTIKDSIDTAGVVTTGGTSGRTNFVPAEDATVVRRLKEAGAILL 172 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E + YG +P+ +D +PGGSSGG+ A VA +G+D Sbjct: 173 GKSNTPEMTWSYETNNAVYGRTNNPY-GLD----LSPGGSSGGAGAIVAAGGSPFDVGSD 227 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA----GIITRTVRDSAILLKAI 235 TGGSIR P+ F G G+KPT GR SR G I A L Q+ G + R+V D +L + Sbjct: 228 TGGSIRVPSHFCGIAGLKPTSGRISRTGHIVPAEGLLQSFTVLGPMARSVDDLWLLFSVL 287 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG D DA + P+ D PK RL L I GI+ DA Sbjct: 288 AGPDWRDAALIPAPLGD----------------PKHVRLRDLR--IAMHTDNGIA-APDA 328 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG----KDILEMYENTR 351 + + A A +A S++ D + R +G K +L++ T Sbjct: 329 AVRQAVVDAAAALEAGGARVESKKPDALSDVLTIDADIF--RADGSAWLKRLLDLAGTTD 386 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G EV L+S S L A R R F + VD I+ P Sbjct: 387 P---GAEVD-------AALASEPLSSGELTAAVERLDAWRGRMLGFMKDVDAIVCPPCVL 436 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 P + G Y + A NM G PA+ V A + P+G+Q+IG+PFRE+ Sbjct: 437 ETLPHDAWVEHGVYAGFSY----SFAYNMTGWPAVVVRAGTSSRGTPVGVQIIGRPFRED 492 Query: 472 TLFSVGQIIEKEAGYFR 488 + ++ IE+E G +R Sbjct: 493 VVLALAGHIERELGGYR 509 >gi|226356029|ref|YP_002785769.1| amidase [Deinococcus deserti VCD115] gi|226318019|gb|ACO46015.1| putative amidase [Deinococcus deserti VCD115] Length = 469 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 154/501 (30%), Positives = 236/501 (47%), Gaps = 61/501 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ A+S + R D++ E+ +Y+ ++ N Q+ A I V A+A AE D+ Sbjct: 11 DLDACALSAATTR---GDLTCSEVTRAYLTRLQALNGQLRAVI-TVNPSAQADAEALDQL 66 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + G+ R + G+P+ IKD G+ T A S +L P ++ + +L GAV+LGK Sbjct: 67 PL-GERRSMHGVPVLIKDNIDVAGLPTTAGSILLKDHIPAEDAPLVARLRAAGAVILGKA 125 Query: 123 NMDEFA----MGSSNE-TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E+A +G SN +S G ++PW T SS GS AVA LCAA+IG Sbjct: 126 NMTEWANFMTLGMSNGYSSLGGQTVNPWGPEVDTGG-----SSSGSGVAVAARLCAAAIG 180 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA +G +G+KPT G R GII + S D AG ITR+VRD+A+LL +AG Sbjct: 181 TETSGSIVSPAHQSGVIGLKPTVGLVPRTGIIPISHSQDTAGPITRSVRDAALLLNVMAG 240 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D NLPVPD + +++G ++G+ ++ +SP + + AGA Sbjct: 241 PDAQDPASRNLPVPDLSLT-EGALKGASIGVIRDET--GVSPADQQAQSAAEEAMIRAGA 297 Query: 298 KIVEISLPHTQYALPAYYIISPA--EASSNLARY-DGVRYGLR-----VEGKDILEMYEN 349 +V + P + +++ E +L Y GV G R +E D + Sbjct: 298 TLVPVDFPSRAEMQASGWMLDVLVYEFKHDLNAYLAGVTNGPRSLSEVIEAND----ADP 353 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK--IRTLIKRDFTEAFEQGVDVILTP 407 R + +GQ + + LS + YLRAR+ +R F + F +G+D +L P Sbjct: 354 ERCLRYGQHLLYAAQGTRGDLS----EQGYLRARERDLRLTRTGGFDQLFARGLDAVLFP 409 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 G G AG P++SVP P G+ L+ Sbjct: 410 ----------------GIQG-------CSQAAKAGYPSLSVPH--VGTGAPGGVLLVAPA 444 Query: 468 FREETLFSVGQIIEKEAGYFR 488 ++ L S+G + +E G R Sbjct: 445 GQDGRLMSLGAHLNRELGGVR 465 >gi|148255804|ref|YP_001240389.1| amidase [Bradyrhizobium sp. BTAi1] gi|146407977|gb|ABQ36483.1| amidase [Bradyrhizobium sp. BTAi1] Length = 504 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 115/425 (27%), Positives = 203/425 (47%), Gaps = 20/425 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ S L+GF P ++T+ ++ D G ++GK + F + Sbjct: 88 LAGRTVVLKDNVALAGVPMMNGSTTLEGFIPAADATIVSRILDAGGTIVGKAVCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS PV +PW+ ++ GGSS GS+A VA SIG D GGSIR PAS+ Sbjct: 148 GGSHTSDPAPVHNPWKM-----GYSAGGSSSGSAALVAAGEVDMSIGGDQGGSIRIPASY 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+K T+G G++ ++D G +T V+D+A+LL+ +AG D D V Sbjct: 203 CGIYGMKATHGLVPYTGVMPIESTIDHTGPMTANVKDNALLLEVLAGADGLDPRQYAPKV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y AL + ++G+ +G+ KE + + + + G GA + E+S+P + Sbjct: 263 SAYTEALGKGVKGLKIGVLKEGFSAPNMEEGVVSKVKAGAERFAKLGASVSEVSIPEHMH 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN--TRSIGFGQEVKHRIMIG 366 AL A+ I+ + +G+ + + + +L+ + TR+ +K +++G Sbjct: 323 ALAAWNPITLEGFLVQMMLGNGMGFNWKGLYDVGLLDAHSGWRTRADDLSVTLKLTMLVG 382 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + L +Y ++R I K + F D++L PT P A P+ ++ + Sbjct: 383 QWGL-EHYRGRYYAKSRNIAIQAKAAYDAMFGS-YDLLLMPTLPCVATPIPAKD---APL 437 Query: 427 GHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + F T ++ G PA+++P L + +P+GL LIG+ + E T++ E Sbjct: 438 AEVVQRAFEMTATTSPFDVTGHPAMTLPCGLSD-GLPVGLMLIGKDYAESTIYQAAAAFE 496 Query: 482 KEAGY 486 + + Sbjct: 497 ADGDW 501 >gi|271501785|ref|YP_003334811.1| amidohydrolase, AtzE family [Dickeya dadantii Ech586] gi|270345340|gb|ACZ78105.1| amidohydrolase, AtzE family [Dickeya dadantii Ech586] Length = 470 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 128/489 (26%), Positives = 222/489 (45%), Gaps = 54/489 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD-KRIIN 65 +++ + L + +SA ++ + IE N +NAY V AQ+ A D KR + Sbjct: 6 LSIRTLQAELAAGHLSATDIARDTLARIEQHNPAVNAYTAVTAQRMLTEANSIDLKRRLG 65 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNM 124 L G+P +K+ F G T A + + P + ++L GA++ G LNM Sbjct: 66 EPLPALAGVPYAVKNLFDVAGETTLAGARLFSQRAPATQDAFAVRQLQAQGALLSGLLNM 125 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D +A G + E ++YG +P + + GGS+ +A + F S+G+DT GSI Sbjct: 126 DAYAYGFTTENTHYGATCNP-HDVTRIAGGSSGGSAAAVAAGLVNF----SLGSDTNGSI 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS G G+KPT+GR SR G F SLD G + R++ D A++ + G D D Sbjct: 181 RVPASLCGIFGLKPTFGRLSRQGTQPFVGSLDHIGPLARSIDDLALVYDVLQGRDPADRF 240 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +++L ++ ++ P R+ Y + D+ + + DA E+ Sbjct: 241 -------QADQSLRSTVPSLSETAPLRSRVLGGYFAQWCDEQAAAAVRQVADALNADSEV 293 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +L + A A +I+S +E G L + T F + R Sbjct: 294 TLDNAVLARTAAFILSASEG-----------------GNQYLPALQATPE-QFEPLSRER 335 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-- 420 ++ G + + + Y++A++ R +R+ F D+++ P TP A P+G+E Sbjct: 336 LLAGAMIPA-----AWYVQAQRFRDHFRREVLALFND-TDLLIAPATPCPATPIGQETMR 389 Query: 421 -NNS-----GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 N++ SMG + T ++ GLP ++VP + +P+G+QLI P+RE+ Sbjct: 390 INHTDLPIRASMG-----MLTQPISFVGLPVVTVP-LVTASGLPIGVQLIAAPWREDVAL 443 Query: 475 SVGQIIEKE 483 +E++ Sbjct: 444 RAAWHLEQQ 452 >gi|37523623|ref|NP_927000.1| amidase [Gloeobacter violaceus PCC 7421] gi|35214628|dbj|BAC91995.1| glr4054 [Gloeobacter violaceus PCC 7421] Length = 519 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 157/516 (30%), Positives = 235/516 (45%), Gaps = 65/516 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V+ + L S +++ +V Y+ I + ++NA +E+ A +R Sbjct: 33 VAALQKALASGALTSRRIVQGYLDRIACYDKQGPKINAVLEINPDALAIADALDAERRAG 92 Query: 66 GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 L GIPI +K AT + T A S L P ++ + +L + G V+LGK N+ Sbjct: 93 KVRGPLHGIPILLKGNIATDDRMLTTAGSVALVDSLPQKDAFIATRLREAGTVLLGKANL 152 Query: 125 DEFAMGSSNETSYYGP---------VISPWRSM---DSTDKFTPGGSSGGSSAAVAGFLC 172 EFA N SYY P ++P+ + TP GSS GS AA A L Sbjct: 153 TEFA----NFMSYYMPSGYSSQGGQTLNPYFPALEDNGVPTVTPCGSSAGSGAATAANLT 208 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A SIGT+T GSI P+SF VGIKPT G SR GII + S D AG +TRTV D+A+LL Sbjct: 209 AISIGTETSGSILCPSSFNSLVGIKPTVGLVSRTGIIPISASQDVAGPMTRTVADAAVLL 268 Query: 233 KAIAGYDECD---ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 AIAGYD D A+ V DY L + G+ +G+P EY LD+L P + Q Sbjct: 269 GAIAGYDPADPVTASSVGQIPADYRTFLKLDGLVGVRIGLPPEY-LDFLGPETRPAFDQA 327 Query: 289 ISWLKDAGAKIVEISLPHTQ--YALPAYYIISPAEASSNLARYDG-VRYGLRVEG-KDIL 344 ++ L+ GA IV+ + T +A P+ + E +L Y V+ G ++ +++ Sbjct: 328 LAVLRAQGAVIVDAPIATTDALFASPSVITVLTYEFKRDLNAYLAKVKPGTTIDTLSEVI 387 Query: 345 EMYENTRSIG--FGQEV-----KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 + R + +GQ + + R+ GT + + D+ A K R L K + +A Sbjct: 388 DFNFRKREVALKYGQGLLVDSQQRRLQDGTPITAQGYRDAL---AEK-RLLAKTEGIDAT 443 Query: 398 --EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 + +D +L PT Y F A AG P++ VPA Sbjct: 444 IAKYDLDALLFPT---------------------YYGSFVGAA--AGYPSVIVPAGYATG 480 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +P+G+ +G+ F E L E+ + RP + Sbjct: 481 GLPIGITFLGKAFSEPQLIQYAYAYEQASLARRPPE 516 >gi|16126850|ref|NP_421414.1| amidase [Caulobacter crescentus CB15] gi|221235632|ref|YP_002518069.1| amidase [Caulobacter crescentus NA1000] gi|13424188|gb|AAK24582.1| pyrazinamidase/nicotinamidase [Caulobacter crescentus CB15] gi|220964805|gb|ACL96161.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Caulobacter crescentus NA1000] Length = 464 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 146/496 (29%), Positives = 241/496 (48%), Gaps = 47/496 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++F +V E +R+ ++A + ++ + I+ + +NA+ V A++A AAAE D + Sbjct: 1 MSFCSVVEIAGEVRAGRVTARAVTEATLSRIQRLDGGINAFTAVTAERALAAAEAVDADL 60 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGK 121 G L G+P +K+ F +G+ T A S I P +++T+ Q+L GAV++G Sbjct: 61 AAGRPVGPLAGVPFAVKNLFDLEGLPTLAGSKIRRAAAPPAHDATLVQRLTAAGAVLVGA 120 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFA G E ++ GPV +P D T GSSGGS+AAVA L ++G+DT Sbjct: 121 LNMDEFAYGFVTENAHDGPVRNPH---DPTRIAG--GSSGGSAAAVAAGLVPLTLGSDTN 175 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA G G+KPTYGR SR G+ F SLD G R+V D A+ + G D Sbjct: 176 GSIRIPAGLCGVFGLKPTYGRLSRQGVFPFVESLDHVGPFARSVEDLALAYDVLQGPDPS 235 Query: 242 -DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI--SWLKDAGAK 298 D C+ D E P RLD L+ ++ + G+ W + Sbjct: 236 GDPICIR----DAE--------------PLAGRLDALA---EQPLRVGVLGGWFQQGAFP 274 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQ 357 V +L AL A ++ N + L EG ++ R++ + Sbjct: 275 EVLAALGRVADALEARDEVT----LQNAQAARAAAFCLTAFEGGELHHEDLARRAMDYDP 330 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 V+ R++ G +L + ++ A++ RT+ + + E F++ D++L P + A P+G Sbjct: 331 AVRDRLLAGA-LLPAGVAEA----AQRFRTIFRDEVREVFQR-YDILLAPASVCPAPPIG 384 Query: 418 KEE-NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + G + ++ FT ++ GLP ++ P ++P+G+Q+I P+RE+ F Sbjct: 385 QATMEMDGVPVSVRKNLGAFTQPISYVGLPVLAAPVNR-PGQLPIGVQIIAPPWREDLAF 443 Query: 475 SVGQIIEKEAGYFRPH 490 + +++ AG H Sbjct: 444 AAALRLQR-AGVVAAH 458 >gi|300789687|ref|YP_003769978.1| amidase [Amycolatopsis mediterranei U32] gi|299799201|gb|ADJ49576.1| amidase [Amycolatopsis mediterranei U32] Length = 460 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 140/466 (30%), Positives = 216/466 (46%), Gaps = 34/466 (7%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++S VE + +QAIE + + NA+ V A +A A+ S+ R +G+ L+G+P I Sbjct: 19 ELSPVEATQNALQAIEARDGECNAFCLVDADRALEQAKASEVRWRDGNPIGWLDGVPSSI 78 Query: 79 KDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD F T+G T S +D RP +S V ++ + G V+LGK E ++ Sbjct: 79 KDMFLTQGWPTVRGSKSIDPDRPWDVDSPVAARMREAGLVLLGKTTTPEIGWKGVTDSPL 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +P + T GGSSGGS+AAVA + S+GTD GGS+R PASF G VG+K Sbjct: 139 CGITRNP-----ADPSKTAGGSSGGSAAAVAAGMGELSVGTDGGGSVRIPASFCGIVGLK 193 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PT+GR F P L AG + R+V D+A+LL ++ D D + PV + A+ Sbjct: 194 PTHGRIPLYPASPFGP-LSHAGPMARSVDDTALLLDVLSLPDPRDPAALAPPVGSFREAV 252 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++G+ + P + + L DAG + E P PA+ ++ Sbjct: 253 RRDVRGLIAAFSPTLGYVDVDPEVAAIVAAAVRALGDAGLHVEETD-PGFADPKPAFDVL 311 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 SS A+ +L+ + +E + + L + S Sbjct: 312 ----WSSGAAK--------------LLDSFPPG-----SEERTDPGLRRVWELGKKWSAS 348 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDVFTV 436 YL A R + E F DV++TPT P +AF G + SG FT Sbjct: 349 DYLDATAERAALGIRMGE-FHTRYDVLITPTLPIAAFEAGHDVPPGSGLSEWPEWTPFTY 407 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 NM PAISVPA +P+GLQ++G ++ + +V +++E+ Sbjct: 408 PFNMTQQPAISVPAGCTSAGLPVGLQIVGPRHSDDLVLAVAKLLEE 453 >gi|115361288|ref|YP_778425.1| amidase [Burkholderia ambifaria AMMD] gi|115286616|gb|ABI92091.1| Amidase [Burkholderia ambifaria AMMD] Length = 508 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 26/439 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I+G A L G + +KD G+ + + +G+ P ++TV ++ D GA + Sbjct: 77 KSTIHGAADGKLRGKTVAVKDNICVGGVPMRNGASTFEGYVPDVDATVVTRMLDAGATIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + + + TS GPV++P ++ S SS GS A +A ++G+D Sbjct: 137 GKSTCEYYCFSGGSHTSASGPVLNPRKAGHSAGG-----SSSGSGALIASGEVDMALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R P+++ G G+KPT+G G + ++D G +T V D+A+LL IAG D Sbjct: 192 QGGSVRIPSAYCGVYGMKPTHGLVPYTGAMPIEATVDHLGPMTGNVLDNALLLDVIAGDD 251 Query: 240 ECDATCVNLPV-PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 D LP DY A+ I G+ +GI +E + L +D+ L+ GA Sbjct: 252 GLDPRQRALPPRADYLGAIRDGIAGLRIGILREGFGLANSEAVVDEAVLVAAHRLRQLGA 311 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRS 352 K+ E+S+P + I+ A+ + + G +G G + M ++ R+ Sbjct: 312 KVDEVSVPLHAAGTAIWLPIAAEGATQQMMK--GNSHGFNWGGLYVTGMIDHHAGWRERA 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 VK +++G Y +SR +Y + + + ++ D+ A Q D++L PT P Sbjct: 370 DELPDTVKVTMLLGEY-FTSRYRGRYYAKCQNLARRLRADYDTAL-QSYDLLLMPTVPIR 427 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQP 467 A K +M F + N A G PA+S+P + E +P+GLQL+G+ Sbjct: 428 A---SKLPEPGCAMSESLTRAFEMLANTAPFDVSGHPAMSLPCGIAE-DLPIGLQLVGRR 483 Query: 468 FREETLFSVGQIIEKEAGY 486 F E T++ E+ + + Sbjct: 484 FDEATIYRCAYAYEQSSDW 502 >gi|111223075|ref|YP_713869.1| amidase [Frankia alni ACN14a] gi|111150607|emb|CAJ62308.1| putative amidase [Frankia alni ACN14a] Length = 483 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 144/490 (29%), Positives = 220/490 (44%), Gaps = 49/490 (10%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 D+++ EL D I IE + +NA +AR AA +D+ G+ R L GIP+ +K Sbjct: 19 DVTSAELTDEAIARIERDDKVINAICVPDFDRARDAARGADQARARGEDRPLLGIPVTVK 78 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 + + G+ T + P ++ +L GAV+LGK N+ + YG Sbjct: 79 ESYNIAGLPTTWGMPQHANYLPAQDAVQVSRLKAAGAVVLGKTNVPVGLQDIQSFNEIYG 138 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW TPGGSSGGS+AA+A A SIG+D GS+R PA F G KPT Sbjct: 139 TTNNPW-----DHGRTPGGSSGGSAAALACGFGALSIGSDLAGSLRTPAHFCGVYAHKPT 193 Query: 200 YGRCSRLGIIS-FAPSLDQ------AGIITRTVRDSAILLKAIAGYDECD---ATCVNLP 249 G + G+++ AP+L G + RT RD A+LL +AG D A V LP Sbjct: 194 LGLAATRGMVAPGAPALPTDLDLAVVGPMARTARDLALLLDVMAGPDPLTGGVAHTVALP 253 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS--LPHT 307 +ER D V + E+ L + + L DAGA++ + LP Sbjct: 254 PARHERLAD-----FRVLVLDEHPLLATGSAVRAGVHRVADALVDAGARVERHTALLPDL 308 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A Y + S ++AR+ +E YE R+ G R + T Sbjct: 309 TDAATLYTQLL---FSGSVARFP-------------VEAYEQLRTRAAGLSADDRSLDAT 352 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-------PLGKEE 420 + + ++ A R L + + + F + D ++ P TPT AF PL + Sbjct: 353 RLRAMVFSHRDWIEANNRRELHRHGWRQLFAE-FDAVVCPITPTPAFGHDHNPDPLERRI 411 Query: 421 NNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + G + + Y D +A MAGLPA ++PA +P+G+QLIG F + T + + Sbjct: 412 DVDG-VEYPYFDQLVLAGLATMAGLPATAIPAGRSPVGLPVGVQLIGPMFEDRTPLRLAE 470 Query: 479 IIEKEAGYFR 488 ++E+ G F+ Sbjct: 471 LLEQRIGGFQ 480 >gi|330971433|gb|EGH71499.1| amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 410 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 113/414 (27%), Positives = 193/414 (46%), Gaps = 40/414 (9%) Query: 93 SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD 152 S +L+G+ P ++T+ ++ D GA + GK N ++F+ S T YGPV +PW+ Sbjct: 4 SKLLEGYIPDIDATIVTRMLDAGATIAGKSNCEDFSFSSGGHTCSYGPVGNPWKP----- 58 Query: 153 KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 PG SS GS+ + +IG D GGSIR PAS++G G+KPTYG G Sbjct: 59 DHNPGASSNGSAVLIGLGEVDMAIGGDQGGSIRLPASWSGCYGLKPTYGLVPYTGCAMIE 118 Query: 213 PSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER----ALDQSIQGMTVGI 268 ++D G + + A LL AIAGYDE D D++ AL++ + G+ + + Sbjct: 119 MTMDHVGPMANSTVGIAKLLTAIAGYDEDDPRQQGRITSDFDTNYMPALERGVNGLRIAV 178 Query: 269 PKE-YRLDY-------LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 KE + +D P +D I L+ GA + E+S+P A + ++ Sbjct: 179 LKEGFGMDNSEWGQSSSEPEVDACVMAAIDKLRSLGAVVEEVSIPMHLEAYHIWTAVAVE 238 Query: 321 EASSNLARYDGVRYGLRVEG------KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 A++ + + +GV G +G + L T + VK ++ G Y+ R Sbjct: 239 GATAFMLKGNGV--GTNWQGYYNTGLSEALAKGAKTYAQDMPPTVKSVLLRGEYM---RQ 293 Query: 375 Y--DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-----SGSMG 427 Y + +Y +A+ +R L+ + + DV+ PTT A + +++ ++ Sbjct: 294 YYNNRYYCKAQNLRHLVVEAYDKVLAD-FDVVACPTTVCRATKMVTRDHSPLEVVDNALS 352 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + N T +++G P+IS+P + +P+GL L + F + TL + E Sbjct: 353 VLRN---TAVADLSGHPSISIPCGV-RDGLPIGLMLTAKHFDDATLIAASAAFE 402 >gi|297539390|ref|YP_003675159.1| allophanate hydrolase [Methylotenera sp. 301] gi|297258737|gb|ADI30582.1| allophanate hydrolase [Methylotenera sp. 301] Length = 457 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 129/430 (30%), Positives = 194/430 (45%), Gaps = 64/430 (14%) Query: 71 LEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P IKD GI T AC + P +TV QKL D GA+ +GK N+D+FA Sbjct: 65 LYGVPFAIKDNIDLAGIPTTAACPEY--AYIPTVSATVVQKLIDAGAIPIGKTNLDQFAT 122 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG + + + GGSS GS+ +VA + + S+GTDT GS R PAS Sbjct: 123 GLVGTRSPYGACQNSFNP-----DYISGGSSAGSAVSVALGMASFSLGTDTAGSGRVPAS 177 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F VG KP+ G S G++ +LD I T D+A +L++ G+DE DA Sbjct: 178 FNNLVGHKPSCGLLSTSGVVPACRTLDCVSIFALTAEDAAQVLESAQGFDEEDA------ 231 Query: 250 VPDYER-----ALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEIS 303 Y R L + +G T G+PK+ +L + + + ++Q I LK G K VEI Sbjct: 232 ---YSRKAVAEVLTIAEKGFTFGVPKQDQLAFFNNNETPELFKQAIEQLKALGGKAVEID 288 Query: 304 L-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + A Y E RY +R E +E F V + Sbjct: 289 FEPFLETARLLY------EGPWVAERYAAIR-----------EFFEAKPEAIF--PVTKQ 329 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAFP 415 I+ G S+ YL K++ L ++ EA +DV++TPT T +A P Sbjct: 330 IIGGATKFSAA---DTYLSQYKLKALQRK--AEAVWNDIDVMVTPTAGTIYTIDEVNADP 384 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + N +G+ +T +N+ L A +VP + MP G+ + F++ L + Sbjct: 385 IRCNSN----LGY-----YTNFMNLLDLSATAVPTGFQQDGMPFGITVCAPAFKDMQLLT 435 Query: 476 VGQIIEKEAG 485 + ++K + Sbjct: 436 LAAKVQKHSA 445 >gi|218290490|ref|ZP_03494610.1| Amidase [Alicyclobacillus acidocaldarius LAA1] gi|218239511|gb|EED06706.1| Amidase [Alicyclobacillus acidocaldarius LAA1] Length = 452 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 139/484 (28%), Positives = 222/484 (45%), Gaps = 61/484 (12%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK---RIINGDARDLEGIP 75 + +SA + ++ AIE N ++NA++ V + +R A D+ R G L GIP Sbjct: 17 RGLSASASLAQWLAAIERENGRLNAFLCVATEMSRQQASAIDQLAARFPEGLG-PLAGIP 75 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD T + T P + +L A+++GK ++ EFA G +NE Sbjct: 76 ISVKDLIDTSFLPTTYGHGRFREHVPDRTALCVARLQRAHALIIGKAHLHEFAFGVTNEN 135 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++GP +P T SSGGS+A+V G + AS+GTDTGGS+R PA+ TG VG Sbjct: 136 PHFGPARNPRDPGRITGG-----SSGGSAASVVGGMAQASVGTDTGGSVRIPAALTGCVG 190 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP+YG G++ AP+LD G + +V D+A++ +AG D DA ++LP P Sbjct: 191 FKPSYGLVPTDGVLPLAPTLDHVGTLANSVEDAAVVTAVMAGIDP-DA-WLSLPAPGGR- 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW-LKDAGAKIVEISLPHTQYALPAY 314 + + + +P + W +G++ L++ G +EI+ Sbjct: 248 --------LRAAVIPNLVSRFAAPEV-SAWFEGLTHVLQNRGT--IEIT----------- 285 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRIMIGTY 368 S +L + R+ + G E Y R+ +G +V+ R+ G Sbjct: 286 -------GSVDLDVDEIARHQANILGA---EAYATHRAWLTEHKDAYGADVRERLEDGAR 335 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGS 425 V ++ +S RAR R I+ F + D IL PTTP A +G+ N Sbjct: 336 VDAASYAESLRFRAR-FRDAIRDVFAQ-----YDCILLPTTPIPATRIGETTVWINGEER 389 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 FT N++G PAIS+PA +P+GLQ++G+P + L + + IE + Sbjct: 390 AVRPLLTRFTNPWNLSGAPAISIPAGQV-SGLPMGLQIVGKPGGDAELIRIARRIEADIA 448 Query: 486 YFRP 489 P Sbjct: 449 SHLP 452 >gi|170693851|ref|ZP_02885008.1| Amidase [Burkholderia graminis C4D1M] gi|170141269|gb|EDT09440.1| Amidase [Burkholderia graminis C4D1M] Length = 469 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 130/487 (26%), Positives = 226/487 (46%), Gaps = 39/487 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL ++ + + +R++++S VE+V +++ I+ + ++NA + VA A AA ++ Sbjct: 3 SELLYLDATRLAELIRTREVSPVEVVKAHLDRIDAVDPKINAIV-TVADDALEAARAAET 61 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +++G A L G+P KD T G+ TQ S I G P ++T +L + G ++L Sbjct: 62 AVLSGKALGPLHGVPFTAKDSIDTAGVATQRGSPIFKGRVPDADATSVARLKNAGGILLA 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF+ ++ G +PW + TPGGSSGG SAA+A + +GTD Sbjct: 122 KTNLPEFSYWIESDNLLSGRSNNPWDL-----ERTPGGSSGGESAAIAAGMSPLGLGTDL 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYD 239 S+R PA+ TG V +K T+GR GI AP G + R++RD A+ ++G D Sbjct: 177 AISVRGPAAQTGIVSLKATHGRVPMTGIWPRAPRRFWHVGPMARSIRDLALAFSQLSGPD 236 Query: 240 ECDATCVNLPVPDYERALDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DA + VP ++ + +S + + VG E + P + T Q LK G Sbjct: 237 GHDAFASST-VP-FDAGVGRSPDRPLRVGWMVEPGFGPVDPQVAATVQAAAEALKSLGLV 294 Query: 299 IVEISLPHTQ--YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + + +P + +AL + + E A G+ E+Y+ ++ Sbjct: 295 VEPVRIPALERDFALDVFNRLHVMEMKPAFAEV--------TAGRAEDELYKMAKT---- 342 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 M+ S R Y+ A + ++ + E F + D ++T P A Sbjct: 343 -------MLALPDTSMR----DYIDAEQAAERLRDGYAEYF-RNYDALITHVLPIPAHKH 390 Query: 417 GKE--ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G + N ++ Y TV +N+ GLP IS+ ++ +P+ +Q++G E T+ Sbjct: 391 GVDTFSINGHTVDATYLQGATVPLNVTGLPGISMRFGTSKEGLPINVQIVGSWQAESTIL 450 Query: 475 SVGQIIE 481 V ++E Sbjct: 451 HVASLLE 457 >gi|8163875|gb|AAF73891.1|AF223949_1 amidase [Arabidopsis thaliana] Length = 607 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 218/481 (45%), Gaps = 41/481 (8%) Query: 17 RSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LE 72 RSK + +++ I IE I A + AE S +R G+ L+ Sbjct: 139 RSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISVLD 198 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GI + IKD T + L R +S V KL GA++LGK NM E MG+ Sbjct: 199 GIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGMGT 258 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + S YG +P ++T GGSS GS+A VA LC+A++GTD GGS+R P++ Sbjct: 259 TGNNSNYGTTRNP----HDPKRYT-GGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALC 313 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G+K TYGR G + +++ G + ++ D+ ++ AI G D + P Sbjct: 314 GITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADRYNLKPSPP 373 Query: 252 DYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVEISLPH 306 + + L +I + +G ++ D S I + + L + G K+VEI +P Sbjct: 374 CFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKVVEIVVPE 433 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + A+ I + S+L Y E ++ +TR+ Sbjct: 434 LEEMRAAHVISIGSPTLSSLTPY--------CEAGKNSKLSYDTRT-------------- 471 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 ++ + S Y+ A+ +R + F+ VDVI+TPTT +A + + +G Sbjct: 472 SFAIFRSFSASDYIAAQCLRRRLMEYHLNIFKD-VDVIVTPTTGMTAPVIPPDALKNGET 530 Query: 427 G-HIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + D+ F +A N+ G PAISVP ++ +P+GLQ+ G+P+ E T+ + +E+ Sbjct: 531 NIQVTTDLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIRGRPWAEATVLGLAAAVEEL 590 Query: 484 A 484 A Sbjct: 591 A 591 >gi|160871643|ref|ZP_02061775.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Rickettsiella grylli] gi|159120442|gb|EDP45780.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Rickettsiella grylli] Length = 464 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 139/513 (27%), Positives = 225/513 (43%), Gaps = 98/513 (19%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEE 58 L F++ ++ K+IS VE++ +++ I++ NS++NA I EV+ +KAR A ++ Sbjct: 2 LYFLSARTLTTLIKEKEISCVEVIHAFLDRIQHVNSKLNALIQCENPEVILEKARLADKK 61 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 K N L G+PI IKDC KG S F ++T +L G ++ Sbjct: 62 LSK---NQPLGPLHGVPITIKDCCKVKGFTNSKGSCGYSVFA-REDATAVARLKAAGGIV 117 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LG N+ EF + + YG ++P+ TPGGSSGG +A +A +G+ Sbjct: 118 LGISNVPEFNIAYETDNDRYGKTLNPYDLSR-----TPGGSSGGEAAIIAAGGSVIGLGS 172 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPSLDQAGIITRTVRDSAILLK 233 D GSIRQPA TG VG+KPT G R G + + SL G + R V D + L Sbjct: 173 DGAGSIRQPAHNTGIVGLKPTRGLIPRSGFVPSDGSGLSRSLITFGPMARFVEDIVLTLP 232 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 ++G D D PD M + IPK +P K + +++ Sbjct: 233 LLSGPDPTD--------PD----------AMPISIPK-------APIHCKNLR--VAFYS 265 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--------E 345 D G I+SP +A+ L + V GL+ E KDI E Sbjct: 266 DNG-------------------IVSPCQAT--LQTINQVVEGLQNEVKDIEYQCPPYLNE 304 Query: 346 MYE---------NTRSIGFGQEVKH-------RIMIGTYVLSSRCYDSHYLRARKIRTLI 389 +Y R +G +K+ R++ ++ +C S R++R + Sbjct: 305 LYTLITETFILGGDRGLGLKNLIKNLGINKPSRLLKEFLAIARQCEFSITELHRRLRRID 364 Query: 390 K-RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 + R E F D+IL P T A LG+ S GH ++ + N+ G P +++ Sbjct: 365 ELRISLEKFFIPYDIILCPVAATPAKLLGR----SFIEGHDFS--YLSLYNLTGWPVLTL 418 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ +P+G+Q++ +P+ + +GQ +E Sbjct: 419 RCGSSKEGLPIGVQIVAKPWHDNLALMIGQKLE 451 >gi|288936079|ref|YP_003440138.1| amidase [Klebsiella variicola At-22] gi|288890788|gb|ADC59106.1| Amidase [Klebsiella variicola At-22] Length = 516 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 148/491 (30%), Positives = 229/491 (46%), Gaps = 45/491 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEE 58 S++ M +SE R L KDI++ ++V +Y+ AI + Q + A I + A + A+ Sbjct: 28 SQITKMNLSELRSALDKKDITSEQIVSAYMAAINKDDRQGKKIKALI-TLNPDALSQAKA 86 Query: 59 SDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D+ G A L GIP KD F TK I T + L+ +P + V +KL + GA+ Sbjct: 87 WDEADHGGKANAPLAGIPFIAKDNFDTKDILTTGGNLALETNKPAKNAFVIEKLLNEGAI 146 Query: 118 MLGKLNMDEFAM--GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 ++GK NM E A G +S G ++P+ + T SS GS+AAVA + Sbjct: 147 LIGKANMSELAASYGWMGYSSVGGQTVNPYNPLRDTSG-----SSSGSAAAVAAGFAPFA 201 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDT GSIR PAS TGTVG++PT G SR G+I + + D G ITRTV D AI+L AI Sbjct: 202 LGTDTSGSIRGPASVTGTVGLRPTLGLTSRSGVIPLSLTADNVGAITRTVSDQAIVLDAI 261 Query: 236 AGYDECDATC--VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 G D D V PV ++ ++ S++G + + D +P +D+ + ++ L Sbjct: 262 RGMDPNDRATEFVKQPVDNFSHSVASGSLKGKKFAVLDNF--DGGNPDVDRIKNEAVNQL 319 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD---------- 342 GA + I LP ++ ++ P + ++D L G D Sbjct: 320 IHDGASVTHIHLP-AEFENLWSLVLGPVGTAEFRPQFDAY---LATLGNDQPKNSTEFLS 375 Query: 343 -ILEMYEN-TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + ++ +N ++I G+ IGT S Y + ++I L E G Sbjct: 376 VLNKLTDNGKKTINPGRYKGLIESIGTTTTDSPEYIG--ILTQRIPHLRSELLKIVQEGG 433 Query: 401 VDVILTPTTPTSAFPL-GKEENNSGSMGHIYNDVFTVAVNM----AGLPAISVPAALCEK 455 D I+ PT A + GK + N +I V + A + G P I+VPA Sbjct: 434 YDAIIFPTMSCPASVIHGKSDKN-----YICKSVDSYAASYIASSTGFPEITVPAGKAVG 488 Query: 456 KMPLGLQLIGQ 466 +P+G +G+ Sbjct: 489 NVPVGFSFMGK 499 >gi|300712846|ref|YP_003738658.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus jeotgali B3] gi|299126530|gb|ADJ16867.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus jeotgali B3] Length = 474 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 123/413 (29%), Positives = 187/413 (45%), Gaps = 21/413 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ +KD A KG+ S IL+ P ++T +L D G ++GK NMD FA G Sbjct: 79 LSGLSFVLKDNIAVKGLRMTCGSKILETV-PTIDATALNRLLDAGGSVVGKANMDAFAFG 137 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S G V +P D+ PGG+S G AVA L +G+DTGGS+R PA+ Sbjct: 138 PGGLWSERGRVRNPI----DADRI-PGGTSSGCGVAVAAGLADVGLGSDTGGSVRSPAAC 192 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VGIKPT+G SR G + PS D G + R V +A +L+AI G D D + V Sbjct: 193 CGVVGIKPTHGLVSRYGFVENVPSADTIGPLARDVETAARVLEAIRGPDVHDPKTSAINV 252 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 R + +S + +G+ + D +P + + ++G + ++L + Sbjct: 253 VPLNRNI-ESFDSLQIGVLELEPHDISAPVTEAIAELAADLDAESGVSVGSVNL-DMEDI 310 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AY IIS AE + L + R G+ EM + R++ G Y L Sbjct: 311 EEAYSIISGAEFAWLLRQSFAQRGGVPTPP----EMISLVDGEALNDHIIGRLLPGAY-L 365 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + Y A++ K FE+ DV+LTPT T P E+ G + Sbjct: 366 DALTDGRAYALAQEQVVAFKHTLKTYFER-FDVLLTPTLRT--LPPKPEQLRDSEGG--F 420 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 N ++A PA+SVP E+ +P+ QL+ F + T + +++E+ Sbjct: 421 NYTIAKQFSLAETPAVSVP--FTERDGLPVSAQLLAPQFEDRTAITAARLVER 471 >gi|75392575|sp|Q84DC4|MANHY_PSEPU RecName: Full=Mandelamide hydrolase gi|27762475|gb|AAO23019.1| mandelamide hydrolase [Pseudomonas putida] Length = 507 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 145/495 (29%), Positives = 234/495 (47%), Gaps = 47/495 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-IN 65 + ++E+ +R + I++ +LV++++ I + S++NA+I V A A A+ D + Sbjct: 28 LTLTEASALVRHRRITSRQLVEAWLSRIADF-SELNAFISVDAAAALKQADSYDHYLEAG 86 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 GD L G+PI +KD G A + L F P + V + L GA+++GK NM Sbjct: 87 GDPLPLGGVPIAVKDNIQVVGFANTAGTPALSKFFPTCNARVIEPLLKAGAIVVGKTNMH 146 Query: 126 EFAMGSSN-ETSYYGP-VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E A G+S T+Y+ P VI + D + GGSS GS AV L A++GTDTGGS Sbjct: 147 ELAFGTSGYNTAYHIPGVIGVRNAFDHS--CIAGGSSSGSGTAVGALLIPAALGTDTGGS 204 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQP + G VG +PT GR GI +P+ D G I R+V D +L I G A Sbjct: 205 VRQPGAVNGCVGFRPTVGRYPVDGITPISPTRDTPGPIARSVEDIVLLDSIITG-----A 259 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 +P + + + +G+ + D LS + K + + L+ G +IV +S Sbjct: 260 LPAEVP----------AAESIRLGVVDQLWAD-LSEPVRKLTEDALRKLEQQGVQIVRVS 308 Query: 304 LPHT-QYALPAYYIISPAEASSNLARY-----DGVRYGLRVEG---KDILEMYENTRSIG 354 + + + ++ E S L Y GV + V G D+ ++E+ G Sbjct: 309 MSEIFEMSHAVSMPLALHECRSALTEYLSANETGVSFDELVAGISSPDVRTIFEDYILPG 368 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSA 413 E++ G V + Y + AR LI+ F F E +D I+ PTTP Sbjct: 369 RLGELE-----GQSVDLEQAYATAMKDARP--KLIQ-SFEFLFKEHQLDAIIHPTTPD-- 418 Query: 414 FPLGKEENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKK-MPLGLQLIGQPFRE 470 L + N + + + + A + AG+P IS+PA L +++ +P+G+++ G P + Sbjct: 419 --LAIKSNPAATSFEAFARMIRNADPASNAGMPGISLPAGLSQQEGLPVGIEIEGLPGSD 476 Query: 471 ETLFSVGQIIEKEAG 485 L S+ IE G Sbjct: 477 ARLLSIANFIESILG 491 >gi|190895565|ref|YP_001985857.1| hypothetical protein RHECIAT_PA0000250 [Rhizobium etli CIAT 652] gi|190699510|gb|ACE93594.1| probable glutamyl-tRNA amidotransferase protein, A subunit [Rhizobium etli CIAT 652] Length = 456 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 126/469 (26%), Positives = 209/469 (44%), Gaps = 42/469 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+V++ ++S V++ ++ I N + + ++ +A A S +R+ +G Sbjct: 8 MSVAQLSVLIQSGAADPVDVAEAVFDRIANYADEA-VFTMLLEDRAMEEALASSERLRHG 66 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 + L +GIPI KD F +G+ T A S +L G P ++ V L + G + +G+ NM Sbjct: 67 RSLGLLDGIPIAWKDLFDIEGVTTTAGSRVLAGDAPAERDAAVVALLKNAGMIAIGRTNM 126 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA +YG ++P +S PGGSS G+ AVA L ++GTDTGGS+ Sbjct: 127 SEFAFSGLGINPHYGTPVNP---QNSDRPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSV 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G VG K T GR + G+ A SLD G + RTV+D+ + DA Sbjct: 184 RVPAAFNGIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRTVKDAVWI----------DAA 233 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L P+ ++ +QG+ + +P+ D P + ++ + L+ AG ++ I++ Sbjct: 234 MRGLTAPEVA---ERPLQGLELLVPENIVFDGAEPGVVAAFEAALERLQRAGVRMSRITI 290 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P A + R +YG V + +++ S + HR++ Sbjct: 291 P----------------AFDEIIRLL-TKYGPLVTAQ-AYALHQERLSGPEADRMDHRVV 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + T L +R HY+ + R + D G +I PT A P+ E + Sbjct: 333 MRTR-LGARTTAPHYMALLEARGRLIADVDRFI--GDRLIAFPTVAHVAPPIAPLEQDDE 389 Query: 425 SMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 N T+ N +S+P + E MP+GL L R+E Sbjct: 390 LFFATNNKTLRNTMFGNFLDWCGVSIPCGMGEAGMPVGLLLSATARRDE 438 >gi|325916518|ref|ZP_08178787.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Xanthomonas vesicatoria ATCC 35937] gi|325537307|gb|EGD09034.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Xanthomonas vesicatoria ATCC 35937] Length = 541 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 152/498 (30%), Positives = 216/498 (43%), Gaps = 46/498 (9%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 R+ D +++ L +Y+Q I+ + +NA IE AQ A A A D G R Sbjct: 49 RMTRGDTTSLALTRAYLQRIDTIDRAGPTLNAVIERNAQ-AEADARALDAERAAGRVRGP 107 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + A S L FRP ++ + Q+L GAV+LGK N+ E+A Sbjct: 108 LHGIPVLLKDNIDAVPMVNSAGSLALSAFRPSRDAFLVQRLRAAGAVILGKTNLSEWANF 167 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ++S P GSS G+ AA+A L IGT+T GSI PAS Sbjct: 168 RSTQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAASLATVGIGTETDGSITCPASV 227 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL-- 248 G VG+KPT G SR GII + S D AG +TR+V D+A LL+AIA D D N Sbjct: 228 NGLVGLKPTVGLVSRDGIIPISASQDTAGPMTRSVADAAALLQAIASPDPQDPATGNAPS 287 Query: 249 PVPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P PDY L ++G +G+ + R D P I + + L+ AGA ++E L Sbjct: 288 PTPDYLAHLTPDGLRGARLGLLRNPLRED---PAIAAALDRAVQTLRAAGATLIETRLAT 344 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG----FGQEVKHR 362 A + E + L Y R V+ D L + + FGQE+ + Sbjct: 345 DGQWDAAEQTVLLVEFKAGLNAYLRSRAA-PVKDLDALVAFNRANAQREMPYFGQELFEQ 403 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV---------DVILTPTTPTSA 413 + D YL AR + A EQG+ D ++ PTT Sbjct: 404 AQAAPGL-----EDLAYLSARASARWL------AGEQGIDAALKADRLDALIVPTT---- 448 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G + G + A +AG P++SVP + +PLGL +G + E L Sbjct: 449 ---GAAWVTTLDKGDTFPGAGYGAAAVAGYPSLSVPMGQTQ-GLPLGLLFMGTAWSEPRL 504 Query: 474 FSVGQIIEKEA-GYFRPH 490 + E+ + F P Sbjct: 505 IELAYAYEQRSHARFAPR 522 >gi|168000260|ref|XP_001752834.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695997|gb|EDQ82338.1| predicted protein [Physcomitrella patens subsp. patens] Length = 590 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 138/489 (28%), Positives = 224/489 (45%), Gaps = 49/489 (10%) Query: 18 SKDISAVELVDSYIQAIENS-NSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 S I+ ++ + +I AIE+S + MN +I + + + A + +R G L+G+P Sbjct: 118 SGRITPTQVAEQFISAIEDSRKAGMNLFIAMDSGDVLSQAAAATERYKQGTPLSVLDGVP 177 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD T + L R E + ++L GAVM+GK NM E MG++ Sbjct: 178 IAVKDEIDCLPYRTTGGTTWLGKVREVKEDAEAVKRLRSCGAVMVGKTNMHELGMGTTGI 237 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +YG +P + + SSGGSSAAVA +C A++G D GGS+R PA G V Sbjct: 238 NPHYGATRNPHNILRVSGG-----SSGGSSAAVAAGICPAALGVDGGGSVRMPAGLCGVV 292 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC-----VNLP 249 G KPT+GR S G + ++ G +T +V D+ I+ A+ G D NLP Sbjct: 293 GFKPTFGRTSNAGFLPLNWTVGMLGTLTGSVEDALIMYAAMHGPRPDDDIVSFPPPANLP 352 Query: 250 V---PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLP 305 + PD + G D + + + ++ K+VE+++P Sbjct: 353 LLKDPDEASTNTAKVMGDLKFAKFSKWFDDCDEPVRNACHRALQLVQTTFNTKVVEVTIP 412 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRY---GLRVEGKDILEMYENTRSIGFGQEVKHR 362 + A+++ +E ++L GV Y GL+ G D+ T SI +G +R Sbjct: 413 EIEEMRLAHFVTIGSECCTSL----GVDYRESGLKASGADV----RVTSSI-YGS-FNNR 462 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 IG + R HY E F++ ++I++PTT +A + + Sbjct: 463 EFIGAQRMRFR--QMHY-------------HNEIFKKA-NIIISPTTGATAPLIRRAAEK 506 Query: 423 SGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 G + ++ + +A N GLPA+SVP +P+G+QLIG+P+ E TL V + Sbjct: 507 CGELDYVVGAKLMRYQIAGNFLGLPALSVPVGHDADGLPIGMQLIGRPWSEATLLQVAAV 566 Query: 480 IEKEAGYFR 488 IE+ F+ Sbjct: 567 IERLCSPFQ 575 >gi|284038705|ref|YP_003388635.1| amidase [Spirosoma linguale DSM 74] gi|283817998|gb|ADB39836.1| Amidase [Spirosoma linguale DSM 74] Length = 540 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 154/507 (30%), Positives = 228/507 (44%), Gaps = 55/507 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59 ELN + + + + +++S +A + Y I+ I+ +N+ IE+ A + A Sbjct: 45 ELNEVTIGDLQKKMQSGQYTAAAITQLYLDRIKVIDKQGPSLNSVIEL-NPDALSIANAM 103 Query: 60 DKRIINGDARD-LEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D+ G R L GIPI IKD T + T A + LDG + ++ V +KL D GA+ Sbjct: 104 DQERKAGKLRGPLHGIPILIKDNIDTGDQMMTTAGALALDGHKAAKDAFVAKKLRDAGAI 163 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCA 173 +LGK N+ E+A N S R + + F +P GSS GS +AV+ LCA Sbjct: 164 ILGKTNLSEWA----NFRSTRSSSGWSSRGGQTRNPFVLDRSPCGSSSGSGSAVSANLCA 219 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GT+T GS+ PASF G VGIKPT G SR GII + + D AG +TRTV D+AILL Sbjct: 220 VAVGTETDGSVIAPASFCGVVGIKPTVGLVSRSGIIPISKTQDTAGPMTRTVTDAAILLG 279 Query: 234 AIAGYDECDATCVN---LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 A+ G D DA + DY + L + G +G+ K + + + ++Q I Sbjct: 280 AMTGIDPADAVTTESQGKALTDYTQFLRADGLSGKRIGVEKSFLKGH--EGVVGLFRQAI 337 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYE 348 LK GA IVE+ L L + I AE + + DGV L + + E Sbjct: 338 DVLKKQGAVIVEVEL------LNQFSSIGGAEFTVLQYEFKDGVNQYLASANAGVKSLAE 391 Query: 349 --------NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 +++ F ++ LSS+ Y + R R LI + A Sbjct: 392 VIAYNRKNEAKAMPFFKQETLESSEAKGGLSSKEYTDALAKTRTSRQLIDKLMASA---K 448 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYND-----VFTVAVNMAGLPAISVPAALCEK 455 +D I G +G + I D F MAG P I+VP Sbjct: 449 LDAI-----------CGTSIGFAGCIDLINGDYDTGFYFCPPAAMAGYPHITVPMGTVH- 496 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEK 482 +P+GL I ++E L S+G E+ Sbjct: 497 GLPVGLSFIASAYQEGPLLSIGYAYEQ 523 >gi|193077397|gb|ABO12201.2| putative hydrolase [Acinetobacter baumannii ATCC 17978] Length = 486 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 133/486 (27%), Positives = 220/486 (45%), Gaps = 53/486 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 + + +S ELV Y AIE S +NA+I A A+ DK +++G L GI Sbjct: 28 IHERKVSCEELVHHYFAAIEKQQS-LNAFISTDKASAIQQAQYWDKYLLSGKPCPALMGI 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD G A + L F+P + + QKL D+GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVAGFPNSAGTPALADFKPQSSAPIIQKLIDHGAIIVGKTNMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ +++ GGSS GS+ AVA + SIGTDTG SIR P++ G Sbjct: 147 NTAMHIEGVVGTRNAVNPL--HIAGGSSSGSAVAVAAGMVPISIGTDTGASIRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG +PT GR S+ I + + D AG I TV D ++ + I + + N Sbjct: 205 CVGFRPTVGRYSQESITPISHTRDTAGPIAHTVSDIILIDQLITQEPKKEPLQPN----- 259 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + +GI Y ++L + + + LKDAG +I+ + +P+ + Sbjct: 260 ----------QIRLGI-NPYFWNHLDEDVHEQAHIALGLLKDAGVEIIPVDMPNLEQL-- 306 Query: 313 AYYIISPAEASSNLARYDGVRY------GLRVEGKDILEMYENTRSIGFGQEVKHRIM-- 364 + I P +YD ++Y L +E + ++I F Q + +++ Sbjct: 307 NHAISFPVVVYE--GKYDLIQYLKDHHVNLTIETVVDQISSPDVQAI-FKQNILPQLIQD 363 Query: 365 -IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEENN 422 G V Y ++R + + F+ + +L PT+P A PL E++N Sbjct: 364 HTGHLVPVLPFYQK---AINEVRPQLLELYQNTFKAHNLHALLLPTSPIVA-PLANEQSN 419 Query: 423 SGSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSV 476 S + T+ N GLP +S+P K K+P+GL++ G P ++ + ++ Sbjct: 420 S------IENFQTLIRNTDPGSNIGLPGLSLPIGKGAKSKLPVGLEIDGLPHQDSEILAI 473 Query: 477 GQIIEK 482 G +E+ Sbjct: 474 GVTLEE 479 >gi|17158661|ref|NP_478172.1| amidase [Nostoc sp. PCC 7120] gi|17134610|dbj|BAB77168.1| amidase [Nostoc sp. PCC 7120] Length = 507 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 145/507 (28%), Positives = 228/507 (44%), Gaps = 39/507 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L F + +R++++SAVE++++Y+ I NS++NA + + A A +D Sbjct: 15 MSSLTFAPAHQLARMIRNREVSAVEVLNAYLAQIAKHNSKLNAICTLDEENAYLRARLAD 74 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + G+ L G+PI IKD F T G+ T A L + P ++TV +L GAV+L Sbjct: 75 EALARGENWGALHGVPITIKDIFETAGLLTTAGYIPLKDYVPQQDATVVARLRTAGAVIL 134 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NM E A + S + V +PW ++D +T GGSSGGS+AAVA L + +G D Sbjct: 135 GKTNMAELAGDYQSTNSLFPQVNNPW-NLD----YTAGGSSGGSAAAVAAGLSSLDLGND 189 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-------QAGIITRTVRDSAILL 232 GS+RQPA F G G+KPT R S G I P + G R++ D + Sbjct: 190 IAGSVRQPAHFCGVYGLKPTDRRISTAGQIPEVPGMPVCLRQMMTVGCFARSLEDIRLCF 249 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 IAG D +P+ + +S+Q + + E+ ++ I L Sbjct: 250 SLIAGSDLRRPDVPPIPL---DNPSGKSLQNLKIAWLDEWVEVPVASEIQVAMTAIAHTL 306 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 AG +I E LP + A N+ RY L + I R+ Sbjct: 307 TQAGVQI-EPWLPKNFDLSKTLNLYGRMAAYINIYAQPVDRYNLHRSWQQIF------RT 359 Query: 353 IGFGQEVKHRIMIGTY------VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 G++ + +G + +L+ R Y R EA E D LT Sbjct: 360 ATQGEKELRK--LGDFSRLLPDLLNPRL--KGYFEVLTERDCFTAQMDEALEPW-DAWLT 414 Query: 407 PTTPTSAF----PLGKEENNSGSMGH-IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 P T AF E + H + N +T+ N++G PA+ +P + +P+G+ Sbjct: 415 PVAATPAFTHRPAWSAIEIDGRPYPHAVANGAYTMPFNLSGHPAVVIPIGHTQDGLPIGM 474 Query: 462 QLIGQPFREETLFSVGQIIEKEAGYFR 488 Q++G+ +RE L ++ Q ++K FR Sbjct: 475 QVVGKRWREMELLAIAQELDKVINAFR 501 >gi|172065535|ref|YP_001816247.1| amidase [Burkholderia ambifaria MC40-6] gi|171997777|gb|ACB68694.1| Amidase [Burkholderia ambifaria MC40-6] Length = 508 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 26/439 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I+G A L G + +KD G+ + + +G+ P ++TV ++ D GA + Sbjct: 77 KSTIHGAADGKLRGKTMAVKDNICVGGVPMRNGASTFEGYVPDVDATVVTRMLDAGATIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + + + TS GPV++P ++ S SS GS A +A ++G+D Sbjct: 137 GKSTCEYYCFSGGSHTSASGPVLNPRKAGHSAGG-----SSSGSGALIASGEVDMALGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R P+++ G G+KPT+G G + ++D G +T V D+A+LL IAG D Sbjct: 192 QGGSVRIPSAYCGVYGMKPTHGLVPYTGAMPIEATVDHLGPMTGNVLDNALLLDVIAGDD 251 Query: 240 ECDATCVNLPV-PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 D LP DY A+ I G+ +GI +E + L +D+ L+ GA Sbjct: 252 GVDPRQRALPPRADYLGAIRDGIAGLRIGILREGFGLANSEAVVDEAVLVAAHRLRQLGA 311 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRS 352 K+ E+S+P + I+ A+ + + G +G G + M ++ R+ Sbjct: 312 KVDEVSVPLHATGTAIWLPIAAEGATQQMMK--GNSHGFNWGGLYVTGMIDHHAGWRERA 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 VK +++G Y +SR +Y + + + ++ D+ A Q D++L PT P Sbjct: 370 DELPDTVKVTMLLGEY-FTSRYRGRYYAKCQNLARRLRADYDTAL-QSYDLLLMPTVPIR 427 Query: 413 AFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A L + E+ + + + N T +++G PA+S+P + E +P+GLQL+G+ Sbjct: 428 ASKLPEPGCPMSESLTRAFEMLAN---TAPFDVSGHPAMSLPCGIAE-DLPIGLQLVGRR 483 Query: 468 FREETLFSVGQIIEKEAGY 486 F E T++ E+ + + Sbjct: 484 FDEATIYRCAYAYEQSSDW 502 >gi|289580351|ref|YP_003478817.1| amidase [Natrialba magadii ATCC 43099] gi|289529904|gb|ADD04255.1| Amidase [Natrialba magadii ATCC 43099] Length = 509 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 136/515 (26%), Positives = 228/515 (44%), Gaps = 77/515 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 +V+ D + ++A ELV+ Y+ I+ + ++NA I V +AR A + D + +G Sbjct: 15 SVAAVHDAMADGAVTAEELVEHYLARIDAYDDELNA-ILTVNDRARDRARDLDAQFDRDG 73 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P IKD T + T A S L +P ++ + +L + GA+++ K N+ E Sbjct: 74 FVGPLHGVPTIIKDNHDTHDMPTTAGSTTLADSQPSRDAFIVDQLREAGAIIIAKANLQE 133 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + G +S G + + + P GSSGG++AA+A L GTDT S R Sbjct: 134 LSFGVDTISSLGGATRNAYDL-----EHRPSGSSGGTAAAIAANLGLIGTGTDTCSSNRS 188 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P +F VG++PT G CSR G++ + D G I RTV D+A LL+ +AGYD D Sbjct: 189 PPAFNDLVGVRPTRGLCSRTGLVPLCETQDTPGPIARTVDDAARLLEVMAGYDSEDPVTA 248 Query: 247 ----NLPVPDYERALD-QSIQGMTVGIPKEY--------RLDYLS----PTIDKTWQQGI 289 +P Y LD + +GI +++ D +S + + I Sbjct: 249 RGVGQVPDDGYTAHLDADGLDDARIGIARQFFGLQGDADEYDAVSEDDAAAVTSVLEDAI 308 Query: 290 SWLKDAGAKIVE-ISLPHTQYALPAY------------YIISPAEASSNLARYDGVRYG- 335 L+ AGA IV+ + + T + L A Y+ + +AS + V G Sbjct: 309 DDLEAAGATIVDPVDVVDTNWLLSARVLAYEFARDFDGYLETLGDASPQESLAAVVDSGE 368 Query: 336 ------LRVEGKDILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 R EG DIL +++ + G+ + ++ R + VL++ Sbjct: 369 LAPSIEARFEGGDILGTDQDSLDDNTGYLRRLERRRELRDTVLATLA------------- 415 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 E +D +L P P++ P+ +++ + ++ GLPAI Sbjct: 416 ----------EHDLDALLYP--PSTVPPITVDDHQP------FEEMNCELSAHTGLPAIV 457 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 PA + +P+GL+L+G+ F E LF + E+ Sbjct: 458 TPAGFTDDGLPVGLELLGRAFAEPRLFELAYAFEQ 492 >gi|167840789|ref|ZP_02467473.1| indole acetimide hydrolase [Burkholderia thailandensis MSMB43] Length = 467 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 131/450 (29%), Positives = 208/450 (46%), Gaps = 41/450 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 + A V + AR AA D +I G L G+P IKD T + T A S L GF Sbjct: 45 LAAMTHVTPEIARQAAARIDAQIAGGRRLPLAGVPFVIKDNLFTADMPTHAASPALLGFS 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +T Q+L D GAV LGK NM E A G ++ ++G V +P GGSS Sbjct: 105 ATRNATAVQQLLDAGAVPLGKANMHELAFGITSANGHFGAVRNPHDPARIA-----GGSS 159 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG++ AVA + +GTDTGGS+R PA+F G G++PT R S G+++ +P+ D G Sbjct: 160 GGTACAVAAGI-PFGLGTDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGP 218 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I + D +L + G DAT P P ++ G+ +G+P D L Sbjct: 219 IAHCIDDLLLLDAVLTG----DAT---EPAP-------VALAGLRIGVPDAPYFDGLDLA 264 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY-YIISPAEASSNLARYDGVRYGLRVE 339 + + ++ ++ L DAGA+++ ++ A A + I EA + R+ R Sbjct: 265 VAELTERALAALTDAGARLIPLAARALHEADEACGFPIGGFEALAYWQRFSAERLA---- 320 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 L E +G +V+H I ++ + Y A + R + +AF + Sbjct: 321 ----LPFAEFVARLG-SDDVRH---IFRMLIDAPPSSDVYAAAMDVLQSSVRWYDQAFHR 372 Query: 400 -GVDVILTPTTPTSAFPLGKEENN---SGSMGHIYNDVF--TVAVNMAGLPAISVPAALC 453 GVD I PT A PL + + S + ++ V T + G+P++S+PA + Sbjct: 373 TGVDCIALPTVQCEA-PLVADSGHDLPSDAAYALFARVIRQTGPATLGGVPSVSIPAGVS 431 Query: 454 EKK-MPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+GL L G + L ++ + +E+ Sbjct: 432 KHTGVPVGLMLEGPAGNDRRLLAIAREVEQ 461 >gi|242238352|ref|YP_002986533.1| amidase [Dickeya dadantii Ech703] gi|242130409|gb|ACS84711.1| amidohydrolase, AtzE family [Dickeya dadantii Ech703] Length = 469 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 138/492 (28%), Positives = 219/492 (44%), Gaps = 54/492 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++ ++ + +SAV++ + IE N +NAY + ++ A A D++ Sbjct: 3 LTQLSIRTLQNEVAQGHLSAVDIAQHTLAQIERLNPLLNAYTRLTHERMLAEAAAIDEQQ 62 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGK 121 G L +P +K+ F G T A + + P + ++L +GA++ G Sbjct: 63 RTGQQLPPLAAVPYAVKNLFDVAGETTLAGARLYSRNPPAAQDAFAVEQLRRSGALLSGL 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMD +A G + E S+YGP +P GGSSGGS+AAVA L + S+G+DT Sbjct: 123 LNMDAYAYGFTTENSHYGPTRNP-----HDPSRIAGGSSGGSAAAVAAGLVSFSLGSDTN 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS G G+KPT+GR SR G F SLD G + RT D A + A+ G D Sbjct: 178 GSIRVPASLCGIFGLKPTFGRLSRHGTQPFVGSLDHIGPLARTTEDLACVFDALQGRDLA 237 Query: 242 DATCVNLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V P AL D ++ +G Y + D+ + + A A Sbjct: 238 DRFQVAQPAIAAVDALADDTPLRCRVLG-------GYFADGCDEHAADAVRRVATALAAD 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + LP A A +++S +E G L T + F Sbjct: 291 DDCDLPDAGLARTAAFLLSASEG-----------------GNLYLPALRATPEL-FEPLS 332 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R++ G + ++ YL+A++ R +R F D+++ P TP SA +G+E Sbjct: 333 RERLLAGAMIPAA-----WYLQAQRFRDHFRRQAMALFAD-TDLLIAPATPCSATLIGQE 386 Query: 420 ENN--------SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 SMG + T ++ GLP ++VP +P+G+QLI P+RE+ Sbjct: 387 TMRINGADLPIRASMG-----MLTQPISFVGLPVVTVPLT-AAHGLPIGVQLIAAPWRED 440 Query: 472 TLFSVGQIIEKE 483 +E++ Sbjct: 441 LALQAAWRLEQQ 452 >gi|170690134|ref|ZP_02881301.1| Amidase [Burkholderia graminis C4D1M] gi|170144569|gb|EDT12730.1| Amidase [Burkholderia graminis C4D1M] Length = 484 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 137/479 (28%), Positives = 211/479 (44%), Gaps = 73/479 (15%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA + A AAA D A+ L G+PI +KD T G+ T A + L GF Sbjct: 45 NALTVIDLDGALAAARRIDALPAEAKAQLPLAGLPIVVKDNINTVGLPTSAGTPALAGFV 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGG 158 P + Q+L D GA++LGK NM E A G SSN ++ GPV +P+ PGG Sbjct: 105 PQTNARSVQRLLDAGAIILGKANMHELAFGITSSNLATHAGPVRNPYDP-----ALIPGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS-------RLGIISF 211 SSGG++AA+A + A +GTDTGGS R PA+ TGT G +P+ G G++ Sbjct: 160 SSGGTAAAIAARIVPAGLGTDTGGSTRIPAALTGTAGFRPSVGNGGAERRYDDAYGVVPI 219 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + + D G + R+ D A+L I G A +N G+ +G+P Sbjct: 220 SHTRDTVGPMARSAADIALLDGVITGAGPLPAVALN---------------GLRIGLPAP 264 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 L ++ + + L+ AG V +++ S LA +G Sbjct: 265 LWAG-LERQVEDVARAALKKLEAAGVVFVPVAM-------------------SELADLNG 304 Query: 332 VRYGLRV--EGKDILEMY--ENTRSIGFGQEVKHRI------MIGTYVLSSRCYDSHYLR 381 + G E + L+ + N + E+ RI I VL+ DSHY Sbjct: 305 MVGGPIAIHEARVDLQAWLAANQAPVQTVAEIAARIASPDVRAIYDEVLAG-TLDSHYEA 363 Query: 382 A-RKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIYNDVF-- 434 A R L++ F ++ +D +L PTT +A + E N S ++ G D Sbjct: 364 ALNHWRPLLQAYIAATFADERLDALLFPTTRLAAVQI-DEINGSSTVSIDGAPPIDTMEA 422 Query: 435 ----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 T + +G+P +S+PA + + +P+GL++ G + L ++G IE+ G P Sbjct: 423 FLRNTDPASTSGIPGLSLPAGISAQGLPVGLEIDGPLGSDRRLLAIGVAIEQLLGEIPP 481 >gi|170735616|ref|YP_001776876.1| amidase [Burkholderia cenocepacia MC0-3] gi|169817804|gb|ACA92386.1| Amidase [Burkholderia cenocepacia MC0-3] Length = 508 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 124/439 (28%), Positives = 206/439 (46%), Gaps = 26/439 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I+G A L G + +KD G+ + + +G+ P ++TV ++ D GA + Sbjct: 77 KSTIHGAADGKLRGKTVAVKDNICVAGVPMRNGASTFEGYVPDIDATVVTRVLDAGATIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + + + TS GPV +P ++ S+ SS G A VA ++G D Sbjct: 137 GKATCEYYCFSGGSHTSASGPVHNPRKAGHSSGG-----SSSGCGALVASGEVDMALGGD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R P+++ G G+KPT+G G + ++D G +T +V D+A+LL IAG D Sbjct: 192 QGGSVRIPSAYCGIYGMKPTHGLVPYTGAMPIEATVDHLGPMTGSVLDNALLLDVIAGDD 251 Query: 240 ECDATCVNLPV-PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 D LP DY A+ I G+ +GI +E + L +D+ + L+ GA Sbjct: 252 GLDPRQRMLPPRADYLGAIRDGIAGLRIGILREAFGLANSEKVVDEAVRVAALRLRKLGA 311 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRS 352 + E+S+P A PA ++ AE ++ G +G G + M ++ R+ Sbjct: 312 SVDEVSVP-LHAAGPAIWLPIAAEGATQ-QMMKGNSHGFNWGGLYVTGMIDHHAGWRERA 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 VK +++G Y +SR +Y + + + ++ + A Q DV+L PT P Sbjct: 370 DELPDTVKVTMLLGEY-FTSRYRGRYYAKCQNLARRLRSAYDTAL-QSYDVLLMPTVPMR 427 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQP 467 A L K +M F + N A G PA+S+P + + +P+GLQL+G+ Sbjct: 428 ASELPKP---GCAMSESLTRAFEMLANTAPFDVSGHPAMSLPCGVAD-DLPIGLQLVGRR 483 Query: 468 FREETLFSVGQIIEKEAGY 486 F E TL+ E+ + + Sbjct: 484 FDEATLYRCAYAYEQSSDW 502 >gi|254420973|ref|ZP_05034697.1| Amidase, putative [Brevundimonas sp. BAL3] gi|196187150|gb|EDX82126.1| Amidase, putative [Brevundimonas sp. BAL3] Length = 449 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 134/444 (30%), Positives = 211/444 (47%), Gaps = 53/444 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 + G+PI +KD T + T A S L P ++ + +L GAV++GK N+ E+A Sbjct: 28 VSGMPILLKDNIETTDMPTTAGSLALANNAPGRDAPLVARLRAGGAVIVGKTNLSEWANI 87 Query: 131 SSNETSYYGPVISPW-----RSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S+++ IS W ++++ D TP GSS GS AAVA L A+IGT+T GSI Sbjct: 88 RSSDS------ISGWSAVGGQTLNPYDLARTPCGSSSGSGAAVALGLTPAAIGTETDGSI 141 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PAS G VG KPT G SR I+ + S D AG + TVRD+A +L IAG D DA Sbjct: 142 TCPASVNGIVGFKPTVGLVSRTHIVPISHSQDTAGPMAATVRDAARVLTVIAGSDPADAA 201 Query: 245 CVNLPV--PDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V DY ALD S++G +G+ + L SP ++Q + ++DAGA +V+ Sbjct: 202 TAEADVRRTDYVAALDAGSLRGARIGVMR--FLKGYSPETQAVFEQNLQAMRDAGAVLVD 259 Query: 302 I-------SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-LEMYENTRSI 353 + +L ++ + Y + + ++ LA D + R + I E ++ Sbjct: 260 LPEGPDGRTLGEAEFKVLLYELKH--DLNAYLASTDPTQVRTRTLAQVIAFNAAEPRETV 317 Query: 354 GFGQEV--KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP---- 407 FGQ+V + + M G D Y++AR + A E+G+D ++ Sbjct: 318 LFGQDVFEQAQAMGG-------LDDPAYIQARATSLRL------AGEEGIDRLMRAHSLS 364 Query: 408 --TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 PT++ + + M + + V AG P ++VP ++ MP+GL IG Sbjct: 365 ALVAPTTSRAWTNDPKDDDDMQGAASRLAAV----AGYPHLTVPMGF-DQNMPVGLSFIG 419 Query: 466 QPFREETLFSVGQIIEKEAGYFRP 489 + + + S+G E+ RP Sbjct: 420 GKWDDARILSLGYAFEQATQARRP 443 >gi|83943791|ref|ZP_00956249.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Sulfitobacter sp. EE-36] gi|83845471|gb|EAP83350.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Sulfitobacter sp. EE-36] Length = 448 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 137/478 (28%), Positives = 207/478 (43%), Gaps = 54/478 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+ RDRL S + A+ LVDSYI+ IE Q+ A+ + ARA A D+ G Sbjct: 11 SVTLLRDRLASGALDALALVDSYIKRIEAREPQVGAWAWFDPEFARAQARTLDEHRRAGR 70 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+P+ +KD T+ I T+ G P ++ V +L GA+++GK E Sbjct: 71 PLGRLHGLPVALKDVIDTQRIPTENGCVQDAGRVPLRDAFVVDRLRKEGAILMGKTVTTE 130 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 A +T+ TPGGSS GS+AAVA + +IGT TGGS+ + Sbjct: 131 LAFMQPGKTAN-----------PHNLAHTPGGSSQGSAAAVADGMVPLAIGTQTGGSVIR 179 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATC 245 PASF G G KPT+G R G+++ +PSLD G+ +A+L + + G D+ D AT Sbjct: 180 PASFCGVTGYKPTFGAIPRRGVLTQSPSLDTIGVFASDPAGAALLAEVLFGQDDEDNATT 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + A T P ++ P W+ L +A A++++ +L Sbjct: 240 LC--------AAPALHAAATSAPPLPPVFGFIRP---PGWEDAEPQLHEAFAELLD-ALG 287 Query: 306 HTQYALPAYYIISPAEASS---NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 + LP + A NLA Y G D L G + Sbjct: 288 DQAFELPLPAVFDTAADQRKLINLAEMSYHYYPYWHRGADKL-----------GPITRDA 336 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I G V + YL AR + ++ E F + DVIL P+ P A P G E Sbjct: 337 IEQGNAVPA-----RDYLSARDMPKVLNAALDEMFTR-CDVILCPSAPGPA-PKGLETTG 389 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++N ++T G P I++P + +P+G+QL+G + L Q + Sbjct: 390 D----PVFNGLWT----FCGTPCINLPLFTSTEGLPMGVQLVGARHNDARLLRTAQWL 439 >gi|107026430|ref|YP_623941.1| amidase [Burkholderia cenocepacia AU 1054] gi|116692382|ref|YP_837915.1| amidase [Burkholderia cenocepacia HI2424] gi|105895804|gb|ABF78968.1| Amidase [Burkholderia cenocepacia AU 1054] gi|116650382|gb|ABK11022.1| Amidase [Burkholderia cenocepacia HI2424] Length = 508 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 26/439 (5%) Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I+G A L G + +KD G+ + + +G+ P ++TV ++ D GA + Sbjct: 77 KSTIHGAADGKLRGKAVAVKDNICVAGVPMRNGASTFEGYVPDIDATVVTRVLDAGATIA 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + + + TS GPV +P ++ S+ SS G A VA ++G D Sbjct: 137 GKATCEYYCFSGGSHTSASGPVHNPRKAGHSSGG-----SSSGCGALVASGEVDMALGGD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R P+++ G G+KPT+G G + ++D G +T +V D+A+LL IAG D Sbjct: 192 QGGSVRIPSAYCGIYGMKPTHGLVPYTGAMPIEATVDHLGPMTGSVLDNALLLDVIAGDD 251 Query: 240 ECDATCVNLPV-PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGA 297 D LP DY A+ I G+ +GI +E + L +D+ + L+ GA Sbjct: 252 GLDPRQRMLPPRADYLGAIRDGIAGLRIGILREAFGLANSEKVVDEAVRVAALRLRKLGA 311 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRS 352 + E+S+P + I+ A+ + + G +G G + M ++ R+ Sbjct: 312 NVDEVSVPLHAAGTAIWLPIAAEGATQQMMK--GNSHGFNWGGLYVTGMIDHHAGWRERA 369 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 VK +++G Y +SR +Y + + + ++ + A Q DV+L PT P Sbjct: 370 DELPDTVKVTMLLGEY-FTSRYRGRYYAKCQNLARRLRSAYDTAL-QSYDVLLMPTVPMR 427 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMA-----GLPAISVPAALCEKKMPLGLQLIGQP 467 A L K + +M F + N A G PA+S+P + + +P+GLQL+G+ Sbjct: 428 ASELPKPDC---AMSESLTRAFEMLTNTAPFDVSGHPAMSLPCGVAD-DLPIGLQLVGRR 483 Query: 468 FREETLFSVGQIIEKEAGY 486 F E TL+ E+ + + Sbjct: 484 FDEATLYRCAYAYEQSSDW 502 >gi|94985434|ref|YP_604798.1| amidase [Deinococcus geothermalis DSM 11300] gi|94555715|gb|ABF45629.1| Amidase [Deinococcus geothermalis DSM 11300] Length = 468 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 125/404 (30%), Positives = 193/404 (47%), Gaps = 27/404 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R D++A+E+ +Y+ I N +++A I V A A AE D + L G+P Sbjct: 17 IRRGDLTALEVTRAYLSRIAAHNPRLHAVI-AVNGAAEADAERLDA-LPEHQRGPLHGVP 74 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGS 131 + IKD G+ T A S ++ P ++ + +L GAV+LGK N+ E+A +G Sbjct: 75 LLIKDNIDVAGLPTTAGSLLMTRHVPKADAPLVARLRAAGAVILGKANLTEWANFMTLGM 134 Query: 132 SNE-TSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 N +S G ++PW +D+ + GS AVA LC A+IGT+T GSI PA Sbjct: 135 PNGYSSAGGQTVNPWGEGLDTGGSSS------GSGVAVAARLCVAAIGTETSGSILSPAQ 188 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G +G+KPT G R GI+ + S D AG +TRTVRD+A+LL +AG D+ D LP Sbjct: 189 QNGVIGLKPTVGLIPRTGIVPISHSQDTAGPLTRTVRDAALLLGVMAGPDDADPASRRLP 248 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 VPD D ++ G +G+ ++ +S + + + L AGA + +++L Sbjct: 249 VPDLTLQAD-ALAGAQIGVLRDPPGGPVSEAERASLARAEAALTLAGATLQDVTLESGPE 307 Query: 307 -TQYALPAYYIISPAEASSNLARY-DGVR-YGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 + + L + ++ LAR DG R +E D + R +GQ + + Sbjct: 308 LSNWRLEVLVYEFKHDLNAYLARVQDGPRSLAEIIEAND----ADPERLQRYGQTLLYAA 363 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 LS R Y RAR + R F G+D +L P Sbjct: 364 QATRGDLSERAY--REARARDLDQTRTRGLDPLFALGLDALLWP 405 >gi|219850247|ref|YP_002464680.1| amidase [Chloroflexus aggregans DSM 9485] gi|219544506|gb|ACL26244.1| Amidase [Chloroflexus aggregans DSM 9485] Length = 472 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 124/495 (25%), Positives = 222/495 (44%), Gaps = 37/495 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + +R + +SA E++ +++ IE N +NA + + + A+ A D Sbjct: 3 TELCLQPATVIARLIRQRTVSAGEVLAAHLSRIEAINPHVNAIVTLDVEGAQRRANAIDA 62 Query: 62 RIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G D L G+P+ KD TKG+ T S I F P +++ + +L GAV +G Sbjct: 63 ALARGEDPGPLAGLPVAHKDLAETKGLRTTYGSPIFADFVPDFDALIVARLKAAGAVTVG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF GS +GP +P+ + GGSSGG++ A+A L + G+D Sbjct: 123 KTNTPEFGAGSQTFNLIFGPTRNPYDLSKTC-----GGSSGGAAVALACGLIPIADGSDF 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA + VG +P+ GR + G + RTV D A++L+AIAG D Sbjct: 178 GGSLRNPAGYCNVVGFRPSPGRVPVWPDPTPYLPFVVDGPMARTVADIALILQAIAGPDP 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P + ++L++ ++G+ V + + P + + + + G IV Sbjct: 238 RAPLSIGEPASIFAQSLERDLRGVRVAWSPDLGGLPVDPRVTEVIMGQRAVFEQLGC-IV 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E + P + A + ++ RY L + E+ ++ R+ +K Sbjct: 297 EEATPDLRDADEIFQVMR------------AFRYELTLG-----ELLDHERA-----RIK 334 Query: 361 HRIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK- 418 ++ + + R + RA ++ + E F Q + I+ P + FP+ + Sbjct: 335 DTVVWN--IEAGRALSGPQVGRAMRLHAALLAHLYE-FMQTYEFIIAPVSQVPPFPVEQP 391 Query: 419 ---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E N +I +++ +PAISVPA +P+G+Q+IG+P + ++ Sbjct: 392 YITEINGVPMQNYIEWMRSCYYISVCNVPAISVPAGFTCDGLPVGIQIIGRPRADLSVLQ 451 Query: 476 VGQIIEKEAGYFRPH 490 + E+ Y+R H Sbjct: 452 LAYAYEQATQYWRRH 466 >gi|237800943|ref|ZP_04589404.1| amidase family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023799|gb|EGI03856.1| amidase family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 507 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 142/492 (28%), Positives = 224/492 (45%), Gaps = 40/492 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + SK IS VEL+D+ I+ IE N ++NA+ +AR+ A +++ Sbjct: 5 SELLGKSATELRALIGSKQISPVELLDACIERIETLNPKINAFAATCFDRARSEAVSAEQ 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T + T S + P ++ +L GA+MLG Sbjct: 65 AVMQGKPLGLLHGLPIGIKDLEETAEVLTTYGSPLFRDNIPTQDNLFVARLRAAGAIMLG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLA 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + ++ R +D S + VG +++ + I +++ IS LK Sbjct: 239 QSDPLSYAIAADEFAPRQVDLS--QLRVGYSEDFGTCAVDTHIRAVFREKISALKPLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I L SS +D +R V G L+ + G Sbjct: 297 CEAIDL----------------NLSSAHRTFDVLRAEAFVAG---LQDAHDRNPEALGPN 337 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 + +G + C +H ++R I R F + FE DVIL PTTP S FP Sbjct: 338 TRANFDMGVAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDVILAPTTPVSPFPWSE 391 Query: 416 LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 L E N + + Y + + + PA+S+P K MP GLQ+IG + L Sbjct: 392 LYLREVNGEPLDNYYRWLALCYTITLTTNPALSLPCGTDHKGMPFGLQVIGGFRGDAKLL 451 Query: 475 SVGQIIEKEAGY 486 + Q +E+ Y Sbjct: 452 ACAQALEQATAY 463 >gi|229196323|ref|ZP_04323071.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus m1293] gi|228587177|gb|EEK45247.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus m1293] Length = 470 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 145/488 (29%), Positives = 221/488 (45%), Gaps = 60/488 (12%) Query: 21 ISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 +++ ELV Y+ I + ++N+ +E+ A +R I G L GIP+ Sbjct: 6 LTSKELVMYYLHRIAKYDQDGPEINSILEINPDAIFIAEALDYERKIKGKRGPLHGIPVL 65 Query: 78 IKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE-- 134 +KD T +HT A + L+ ++ + KL + GAV++GK NM E A S E Sbjct: 66 LKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVIIGKTNMTELANAMSFEMW 125 Query: 135 ---TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++ G I+P+ + + D GGSS GS+ AVA S+GT+T GSI PA Sbjct: 126 AGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANCTVISVGTETDGSILSPAVQN 183 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---L 248 VGIKPT G SR G I F S D AG RTV D+AILL ++ G DE D + Sbjct: 184 SVVGIKPTVGLISRRGTIPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDVATYKSEGI 243 Query: 249 PVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVE- 301 DY + LD + G +G+ PKEY Y + D K +++ I L+ GA +VE Sbjct: 244 AEHDYTKYLDVNGLNGAKIGVYSNAPKEY---YETGEYDEKLFKETIEVLRIEGATVVED 300 Query: 302 ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT--RSIGF 355 I++P H +++ + +S E +L Y + + V +++E EN R++ + Sbjct: 301 INMPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISELMEFNENIAERALRY 356 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-AF 414 GQ R + + YL AR D + EQG+D L + F Sbjct: 357 GQTKLER----RKDFPNTLRNPQYLNAR------LEDIYFSQEQGIDFALEKYNLDAILF 406 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P + + + AG P+I++PA + P G+ L F E TL Sbjct: 407 P---------------SYIGSTICAKAGYPSIAIPAGYMDNGRPFGITLASTAFHEGTLI 451 Query: 475 SVGQIIEK 482 + E+ Sbjct: 452 KLAYAFEQ 459 >gi|209886580|ref|YP_002290437.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Oligotropha carboxidovorans OM5] gi|209874776|gb|ACI94572.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Oligotropha carboxidovorans OM5] Length = 471 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 127/483 (26%), Positives = 222/483 (45%), Gaps = 32/483 (6%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E + ++ E + + KD+S VE+ ++A E + S +N + ++ + A AA ++ Sbjct: 3 AEFDTLSAVELKRLIARKDLSPVEVTRRALEAAEATQSALNPFSTLMPEAALKAATAAED 62 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L GIP+ +KD A G+ + S + ++ ++L GA+++G Sbjct: 63 AVMRGQPLGFLHGIPVSVKDLIAVGGVTYASGSKAMANNIAAADAPAVERLRQAGAIIIG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF + G +PW + DK TPGGSS G++A++A + IGTD Sbjct: 123 KTTTSEFGCKPVGDNLLTGITRNPW----NPDK-TPGGSSAGAAASIAAGVTPFGIGTDG 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P SF+G GIK +GR + +S P+L G + R+++D+A+L AIAGYD Sbjct: 178 GGSIRIPCSFSGLAGIKGHFGRVP-VWPVSATPTLAHVGPMARSMQDAALLFSAIAGYDA 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVPD A S++GM + + +P + + ++ + L+D G ++ Sbjct: 237 RDPFSVAGPVPDVLGAAQASVKGMRIAYSPTFGYAKPTPEVLEVIERAVRTLEDLGCEVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++ + + + Y GV LR + EN R + Sbjct: 297 QVDKLFAKDPMDLW----------TAEFYAGVGIKLR-------DFVENKRDM--LDPAV 337 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 ++ G R Y + R ++ F + D +++P P S+ +G Sbjct: 338 ADVLEGALSQDMRSYYTKVFERYAFRDEVRTLF-----ETYDAVVSPVLPVSSLDVGVNI 392 Query: 421 NNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S ++ + V +T N+ G PA SV A + MP+GL ++G+ E + +G Sbjct: 393 PPHLSDRNLVSWVYYTYPFNLTGQPAGSVCAGIAADGMPVGLHIVGRALGEYDVVRLGAA 452 Query: 480 IEK 482 E+ Sbjct: 453 YER 455 >gi|78061981|ref|YP_371889.1| amidase [Burkholderia sp. 383] gi|77969866|gb|ABB11245.1| Amidase [Burkholderia sp. 383] Length = 494 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 130/490 (26%), Positives = 213/490 (43%), Gaps = 42/490 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA-AEESDKRIIN 65 ++ E +RSK +S VE + +Y+ +E N +NA + + + A A A E D + Sbjct: 22 LSAGELASAIRSKAVSCVETMRAYLDHVERVNGAVNAIVALRDRDALLADAAEKDAALAR 81 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ + G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 82 GEYHGWMHGMPQAPKDLAMTKGLRTTYGSPIFRENVPQADSVGVARMRAAGAIFIGKTNT 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS YG +P+ S GGSSGG++AA+A + + G+D GGS+ Sbjct: 142 PEFGLGSHTFNEVYGATRNPYDLTKSA-----GGSSGGTAAALASRMLPVADGSDFGGSL 196 Query: 185 RQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G +P+ GR R G+ F L G + RTV D A LL AGYD D Sbjct: 197 RNPAAFCNIYGFRPSQGRVPRWPGVDVFVQQLGIEGPMGRTVGDVAQLLAIQAGYDRNDP 256 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT--IDKTWQQGISWLKDAGAKIVE 301 + + + LD ++G + ++ YL+ + +QG++ L++ G + Sbjct: 257 LSLADDPAVFAQPLDADLRGKRIAWVGDWN-GYLATEAGVLALCEQGLATLREIGCDV-- 313 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVK 360 ALPA+ A + R L + G +L Y + R E Sbjct: 314 ------DAALPAF-------APDRIWRLWLAHRHL-LSGGGLLAHYRDPARRALLKPEAI 359 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + + + +D+ R + ++ +F D I PT FP ++ Sbjct: 360 YEVEGLLAMQGAAVFDASVERTAWHQAVL------SFFDRYDFIAAPT--AQVFPFDVDQ 411 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + D + V +AG P ISVP + +P+G+QLIG+P + + Sbjct: 412 RWPKEIAGRPMDTYHRWMETVVPWTLAGCPVISVPVGFNDAGLPMGMQLIGRPRADLAVL 471 Query: 475 SVGQIIEKEA 484 + + E+ A Sbjct: 472 QLARGYEQAA 481 >gi|163847163|ref|YP_001635207.1| amidase [Chloroflexus aurantiacus J-10-fl] gi|222525002|ref|YP_002569473.1| amidase [Chloroflexus sp. Y-400-fl] gi|163668452|gb|ABY34818.1| Amidase [Chloroflexus aurantiacus J-10-fl] gi|222448881|gb|ACM53147.1| Amidase [Chloroflexus sp. Y-400-fl] Length = 519 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 143/492 (29%), Positives = 214/492 (43%), Gaps = 50/492 (10%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT-KGIHT 89 I A+ + +NA IEV A +R + G L GIPI +KD T T Sbjct: 44 INALNRAGPCLNALIEVSPSALETAIALDAERDVRGPRSPLHGIPIVLKDNIDTLDDTAT 103 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 A S L G RP E+TV +L GAV+LGK N+ E+A N S R Sbjct: 104 TAGSLALIGSRPAAEATVAARLRAAGAVLLGKANLSEWA----NFRSTSSSSGWSARGGQ 159 Query: 150 STDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 + + + +P GSS GS+ AVA +C A+IGT+T GSI P++ G VGIKPT G SR Sbjct: 160 ARNPYVLSRSPCGSSSGSAIAVAASMCVAAIGTETDGSISCPSAMCGVVGIKPTVGLTSR 219 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---VPDYERALD-QSI 261 G+I + + D G R V D+A +L IAG D D PDY L ++ Sbjct: 220 AGVIPISSTQDTVGPHARCVADAATVLGIIAGPDPHDPATTAAAGHVRPDYRTCLQADAL 279 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYAL-PAYYIISP 319 +G +G+ + R +++ + ++ ++DAGA +V+ ++ P A A + Sbjct: 280 RGARIGVLRSDRFAGFGRHVEQAFAAALTAMRDAGAHVVDPVTFPDELLAFNEAELTVLL 339 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRS----IGFG-QEVKHRI-MIGTYVLSSR 373 E + L RY R D RS I F Q+ +H + G +L Sbjct: 340 YEFKATLNRYLASRV------PDPQAATPAPRSLEELIAFNEQQAEHELRFFGQELLVQA 393 Query: 374 CY-----DSHYLRARKIRTLIKRDFTEA--FEQGVDVILTPTTPTSAFP---LGKEENNS 423 D Y +A R +A +EQ +D ++ P T A+P +G + Sbjct: 394 AAVGDLDDPAYQQALAASRDATRQALDALLYEQQLDALVAPAT-GLAWPIDLIGGDRYPG 452 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 GS + AG P ++VPA + +P+ + IG + E L + E+ Sbjct: 453 GS---------SSLAARAGYPMVTVPAGMA-FGLPIAINFIGTAWSEPMLIRLAYAFEQA 502 Query: 484 AGYFRP--HKWW 493 RP ++ W Sbjct: 503 TKLRRPPVYRQW 514 >gi|269929156|ref|YP_003321477.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269788513|gb|ACZ40655.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 474 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 131/494 (26%), Positives = 233/494 (47%), Gaps = 36/494 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI-EVVAQKARAAAEES 59 MS++ FM +E +R+R +D+SA E++++++ I+ N +NA + +V +A A A+ + Sbjct: 1 MSDICFMTATEMAERIRRRDLSAREVMEAHLAQIKRVNPVVNAIVTQVPEDEALALADAA 60 Query: 60 DKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D + G D L G+PI KD T+G+ T S I + P++++ + ++L GA+ Sbjct: 61 DAALARGEDVGPLHGLPIVHKDLEETRGLRTTFGSPIYRDYVPNHDTLLVERLKRAGALT 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N+ EF GS +GP +P+ D+T T GGSSGG++ A+A + + G+ Sbjct: 121 IGKTNVPEFGAGSQTFNPIFGPTRNPY---DTTK--TCGGSSGGAAVALACGMIPIADGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R P +F VG +P+ GR L G + RTV D A++L AIAG Sbjct: 176 DTGGSLRNPGNFNNVVGFRPSAGRVPTWPAAMGWSMLGVKGPMARTVADVALMLSAIAGP 235 Query: 239 DECDATCVNLPVPD--YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + ++LP P + R L++ +G+ + + + P + + D G Sbjct: 236 DP--RSPISLPEPGSFFARPLERDFRGVRIAWCPDLGGLPVDPRVTAVLESQRQTFSDLG 293 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 +VE + P A ++++ + N A VR+ +E ++ ++T Sbjct: 294 C-VVEEATPDLSDADEIFHVLR----ALNFA----VRHAEHLETHR--DLIKDTVIWNTE 342 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI--LTPTTPTSAF 414 + +K + R H +RA F E +E + V+ + P + Sbjct: 343 EGLKLSALDVGRAEVKRTALYHRMRA----------FFEKYEFLICVVNQVPPFDVEQPY 392 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P E N +I + + G PAISVP + +P+G+Q++G+ + + Sbjct: 393 P--TEINGVPMENYIAWMKSAYYITVTGHPAISVPCGFTPEGLPVGVQIVGRYHDDFGVL 450 Query: 475 SVGQIIEKEAGYFR 488 + E+ +R Sbjct: 451 QLAHAFEQATQVWR 464 >gi|258511317|ref|YP_003184751.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478043|gb|ACV58362.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 454 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 136/483 (28%), Positives = 217/483 (44%), Gaps = 59/483 (12%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK---RIINGDARDLEGIP 75 + +SA + ++ AIE N ++NA++ V + +R A D+ R G L GIP Sbjct: 19 RGLSASASLAQWLAAIERENGRLNAFLCVATEMSRQHASAIDQLAARFPEGLG-TLAGIP 77 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD T + T P + +L A+++GK ++ EFA G +NE Sbjct: 78 ISVKDLIDTSFLPTTYGHGRFREHVPDRTALCVARLQRAHALIIGKAHLHEFAFGVTNEN 137 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++GP +P T SSGGS+A+V G + AS+GTDTGGS+R PA+ TG VG Sbjct: 138 PHFGPARNPRDPSRITGG-----SSGGSAASVVGGMAQASVGTDTGGSVRIPAALTGCVG 192 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP+YG G++ AP+LD G + +V D+AI+ +AG D PD Sbjct: 193 FKPSYGLVPTDGVLPLAPTLDHVGTLANSVEDAAIVTAVMAGID-----------PDTWL 241 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + V + + SP + W +G++ + + I E++ Sbjct: 242 SPPSPAGRLRVAVIPGLVSRFASPEV-SAWFEGLTHVLQSRGTI-ELA------------ 287 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRIMIGTYV 369 S +L + R+ + G E Y R+ +G +V+ R+ G V Sbjct: 288 ------GSIDLDADEIARHQANILGA---EAYATHRAWLAEHRDAYGADVRERLEDGARV 338 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSM 426 ++ +S RAR R I+ F D IL PTTP A +G++ + Sbjct: 339 DTASYAESLRFRAR-FRDAIREVFAR-----YDCILLPTTPIPATRIGEKAVWIHGEERA 392 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT N++G PAIS+PA +P+GLQ++G+P + L + + IE + Sbjct: 393 VRPLLTRFTNPWNLSGAPAISIPAGQV-SGLPMGLQIVGKPGGDARLLRIARRIEADIAS 451 Query: 487 FRP 489 P Sbjct: 452 HLP 454 >gi|331698404|ref|YP_004334643.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326953093|gb|AEA26790.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 465 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 143/476 (30%), Positives = 231/476 (48%), Gaps = 37/476 (7%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 +++++++ LRS + ++V L ++ + + + Y+ + A AAA ++D+ + Sbjct: 2 YLSITDAAAALRSGETTSVALTEAGYAVADAHDEALGVYLRRFDETALAAAAKADEELAA 61 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILD-GFRPHYESTVTQKLWDNGAVMLGKLN 123 G D L GIP+GIKD AT T A S +LD + ++ V +L GAV+ GKL Sbjct: 62 GVDKGPLHGIPLGIKDIIATDEGETTAQSLVLDREWGTMGDAPVVARLRAAGAVITGKLT 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E+A+G + + +PW +TD + PGGSS G+ VA + +GTDTGGS Sbjct: 122 TMEYAIGIPDVEKPFPVPRNPW----NTDHY-PGGSSSGTGNGVAAGMFLGGLGTDTGGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA+ G G+K T+GR + G + S D G + RT D A +L IAG+D DA Sbjct: 177 IRYPATSCGITGLKQTFGRVPKFGCVPLGYSYDHIGPMARTAADCAAMLAVIAGHDARDA 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 V+ PV DY L S++GM +G+ P + P +++ + L AGA +V + Sbjct: 237 CSVDRPVDDYVSGLTGSLEGMRIGVDPLLAASELTVPELEEVLAAATAELTAAGATVVPV 296 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LP + A + A+ + A + G D+ +R +G + Sbjct: 297 ELPLYKELTTATMV---GMAAESYAYHRG----------DL-----QSRWADYGSGTRMA 338 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + IG V +++A+++R ++ E F VD+I+TPT+ G E Sbjct: 339 VSIGALVSG-----GDHVQAQRVRRAGQKMVAELFAD-VDLIVTPTSAC-----GAPEIE 387 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + I + T N G PA+SVP +PLGLQ++G+PF E + + G Sbjct: 388 KLTFDAIIGALHTPYWNALGNPAMSVPMGYTRDGLPLGLQIVGRPFDEAAVLAAGH 443 >gi|221632338|ref|YP_002521559.1| biuret hydrolase [Thermomicrobium roseum DSM 5159] gi|221155469|gb|ACM04596.1| biuret hydrolase [Thermomicrobium roseum DSM 5159] Length = 532 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/255 (38%), Positives = 144/255 (56%), Gaps = 8/255 (3%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 LR+ + S+ LV+ ++ I + ++NA+ ++ ++A A AE D + G D L G+ Sbjct: 89 LRNGETSSRALVERALEQITRRDQELNAFQLLLPEQALADAEARDAELARGIDRGPLHGL 148 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD G T A S IL ++TV Q+L GAV++GK + EFA ++ Sbjct: 149 PVALKDLIDLAGTPTTAGSAILANAVASRDATVVQRLRAAGAVIVGKTRLPEFAYSGASN 208 Query: 135 TSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +YGPV +P R DS + GS+AAVA L ++G+DTGGSIR PA++ G Sbjct: 209 NPHYGPVPNPRDRRRDSGGSSS------GSAAAVAAGLVVMAVGSDTGGSIRIPAAYCGI 262 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPT+GR S G+ A SLD G +TRTV D+A+ L+A+AG DE D +P+PD Sbjct: 263 VGLKPTFGRVSARGVYPLAWSLDHIGPLTRTVTDAAVSLEAMAGPDEDDPRTRAVPLPDL 322 Query: 254 ERALDQSIQGMTVGI 268 A + VG+ Sbjct: 323 VSATQVERLELRVGV 337 >gi|269838332|ref|YP_003320560.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269787595|gb|ACZ39738.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 467 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 141/480 (29%), Positives = 229/480 (47%), Gaps = 40/480 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+F V + LRS + + LV+ + + +++ + NA + ++ +AR A +++ + Sbjct: 7 LSFATVRDLARMLRSGETTPTALVEHFAERLDSVGRRYNAVVTIMLDRARREAAQAEAEL 66 Query: 64 ING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G D L GIP G KD AT G T + L + ++TV ++L D GAV+L KL Sbjct: 67 KAGYDRGPLHGIPYGAKDLLATVGAPTTWGAAPLRDQVFNTDATVIRRLRDAGAVLLAKL 126 Query: 123 NMDEFAMG---SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +M E A G + S GP I+PW + + G S ++ A+ +IG++ Sbjct: 127 SMVELAGGLGYNQPNASLTGPGITPWNPEAWSGGSSSGSGSAVAAGAIP-----FAIGSE 181 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P++F G G++PTYGR SR G ++ + +LD+ G + RT D ++L AIAG D Sbjct: 182 TWGSIVTPSNFCGITGLRPTYGRVSRAGAMALSWTLDKLGPMCRTADDCGLVLDAIAGPD 241 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T LP P Y A +Q +G +G+ ++ LD P + ++Q ++ L + A Sbjct: 242 PDDPT--TLPEP-YRYAPEQDRTEGFRLGVLRD-GLDDAQPEVRANFEQSLAVLSEF-AT 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E++LP YA A I++ A S A D + G V G E R + + Sbjct: 297 LEEVTLPDFPYAEVARIILN---AESAAAFEDLIESGA-VAGLTAPE----DRWGAYART 348 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V + YLRA ++R I + D ++ T A PL Sbjct: 349 VIPAV--------------DYLRALRVRRHIGVALDRLLAR-YDGVVCLTNAVVAAPLDM 393 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + G + A N+AGLPAIS+P E+ +P +Q++G+ E + +V + Sbjct: 394 PLD--AYFGKVRRLPVGAAGNVAGLPAISLPNGFGERGLPTAMQIVGRVGGENAILAVAR 451 >gi|284042000|ref|YP_003392340.1| amidase [Conexibacter woesei DSM 14684] gi|283946221|gb|ADB48965.1| Amidase [Conexibacter woesei DSM 14684] Length = 491 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 132/440 (30%), Positives = 197/440 (44%), Gaps = 64/440 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ + +KD + G+ S +L G+ P +S VT+++ G ++ NMD+ A Sbjct: 77 LSGVRLSVKDSVSVAGVPLTCGSALLQGYVPERDSAVTERILRAGGTIVAITNMDDLAAS 136 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL----CAASIGTDTGGSIRQ 186 + TS YGP ++P F P +GGSS A L A+IGTD GGS R Sbjct: 137 ADGSTSVYGPTLNP---------FDPARLAGGSSGGAAASLFLGGVDAAIGTDQGGSARV 187 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS+ G VG+KPT G GI+ LD GI+ R + + +L A AG V Sbjct: 188 PASWCGVVGLKPTRGLIPYDGIVGTDRLLDHVGILGRDLSTVSRVLAATAGPRPA---AV 244 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP- 305 + PV D L + +G+ P + +Q ++ L+ AGA++ +S+P Sbjct: 245 STPVGDVRLGLLRESLSPGLGV---------EPAVVAAIEQLVARLQQAGARVEHVSVPV 295 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-------------DILEMYENTRS 352 H Q AE + L+ +G+R L G LE R+ Sbjct: 296 HLQT----------AEVEAALS-VEGMRALLSGGGNAPGWQSRSWPTLASALEAGIGARA 344 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 VK ++G VL R HY AR+ I D+ A VD +L P TPT+ Sbjct: 345 ARLSPHVKTAALMGA-VLEERFRGEHYAHARRRCAGIAEDYDRALRD-VDALLLPATPTT 402 Query: 413 AFPLGKEENNSGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQ 466 A P + GS+ + + T N++G PAIS+P LCE +PLG L+G+ Sbjct: 403 AQP----HSAGGSLEDVVLRGWAPMANTAQFNVSGHPAISLP--LCEVAGLPLGAMLVGR 456 Query: 467 PFREETLFSVGQIIEKEAGY 486 +E L ++ IE+ G+ Sbjct: 457 RDEDERLLAIASSIEQTLGW 476 >gi|270264918|ref|ZP_06193182.1| amidase [Serratia odorifera 4Rx13] gi|270041216|gb|EFA14316.1| amidase [Serratia odorifera 4Rx13] Length = 449 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 138/474 (29%), Positives = 210/474 (44%), Gaps = 49/474 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 L S +++AV+L + + I + + + + V AQ A+ A +D+R G L+G Sbjct: 13 LASGELTAVQLTAAALAHIADEQGEGVRTFTRVYAQWAQQQALAADRRRAEGKPLSALDG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ +KD F G T A S +L + V ++L GAV++GK NM EFA Sbjct: 73 VPVSVKDLFDVAGEATAAGSRVLAAAPAAAKHAAVVERLLQAGAVLIGKTNMTEFAYSGL 132 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +PW D + PGGSS G++ AVA +C SIG+DTGGS+R PA+F G Sbjct: 133 GINPHYGTPANPW---DRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFCG 189 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KPT R + G++ +PSLD G+I V AG DA + P+ Sbjct: 190 LTGFKPTARRINDGGLLPLSPSLDSIGVIAHDV----------AGCIALDAAITDRPLQP 239 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + L Q+ +P+ LD L + ++ + L AGA+I I P T++A Sbjct: 240 QLKNLSQA----RFAVPQTLVLDGLDEEVAAGFRFSLQRLAQAGAQIETI--PCTEFA-- 291 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 I+ A S L + R I E E + V RI G + Sbjct: 292 ELAAINAAGGFSALESW-------RWHQALIAEHAEE-----YDPRVLSRIRRGQPL--- 336 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + + ++ R +R T A Q D +L PT P A + + E + + I Sbjct: 337 --GEGDLQQLQQQRADWQRRVTAAV-QAFDALLMPTVPLVAPTVAELEMDEEAYFRINGA 393 Query: 433 VF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEK 482 +N A+S+P C++ P+GL L G P +E L IE+ Sbjct: 394 ALRNPSVINFLDGCALSLP---CQRPGGAPVGLMLAGLPMHDEALLGWALAIER 444 >gi|307328828|ref|ZP_07607998.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306885493|gb|EFN16509.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 474 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 148/493 (30%), Positives = 234/493 (47%), Gaps = 39/493 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + E LR++++SA EL+++++ IE N +NA + +VA +AR AAEE+D+R Sbjct: 7 DLCFRSALELSRLLRTRELSARELLEAHLARIERVNPDINAIVTLVADRAREAAEEADER 66 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I+ G + L G+PI KD T GI T S + DG P + + +++ GA+ +GK Sbjct: 67 IVAGAELGPLHGLPIAHKDTHNTAGIRTSHGSPLADGV-PDRDDLIIERIRAAGAITIGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA GS +G +P+ S SSGG++AA+A + + G+DTG Sbjct: 126 TNVPEFAAGSHTFNPIFGATHNPYDLGRSAGG-----SSGGAAAALASGMIPIADGSDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PASF VG++P+ GR + +L G + RTV D+A+LL A+AG D Sbjct: 181 GSLRNPASFCNVVGLRPSPGRVPVWPAATAWGTLGVKGPMARTVADTALLLSAVAGPDPR 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P + R LD+ + G+ V P L + P + + D G +V Sbjct: 241 SPIALEEPGARFARPLDRDLTGLRVAWSPDLGGLVPVEPEVAAAVTSAVEVFTDLGC-VV 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNL-ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E + P A + + + A D GL+ + I E E R + G +V Sbjct: 300 ERACPDLTEAEEVFRTLRASMFEVAFGALMDRHPDGLK---RAIRENAEAGRKL-TGPDV 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 M+ T + Y R RDF + + DV+L P + F +G E Sbjct: 356 ARAEMLHTTL---------YHRV--------RDFFDRY----DVLLLPVSQVVPFDVGIE 394 Query: 420 ENN--SGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +G Y D A ++ G PA+SVPA +P+G+Q++G + + Sbjct: 395 YPTEIAGVAMDDYLDWMRSAYLISSTGSPALSVPAGFTPGGLPVGVQIVGPHRADFAVLQ 454 Query: 476 VGQIIEKEAGYFR 488 VG E+ G++R Sbjct: 455 VGHAFERATGHWR 467 >gi|307132304|ref|YP_003884320.1| putative amidase [Dickeya dadantii 3937] gi|306529833|gb|ADM99763.1| Probable amidase [Dickeya dadantii 3937] Length = 470 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 128/479 (26%), Positives = 215/479 (44%), Gaps = 54/479 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L + +SA ++ + IEN N +NAY V AQ+ +A A + D++ G+ L + Sbjct: 15 LAAGHLSAADIARDTLARIENDNPAINAYTGVTAQRMQAEAADIDRKRRQGETLPALAAV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ F G T A + + P + ++L +GA++ G LNMD +A G + Sbjct: 75 PYAVKNLFDVAGETTLAGARLFSQRAPAAQDAFAVRQLQSSGALLSGLLNMDAYAYGFTT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E S+YG +P + + GGS+ +A + F S+G+DT GSIR PAS G Sbjct: 135 ENSHYGATRNP-HDLTRIAGGSSGGSAAAVAAGLVNF----SLGSDTNGSIRVPASLCGI 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPT+GR SR G F SLD G + R+ D A + A+ G D D + P Sbjct: 190 FGLKPTFGRLSRHGTQPFVGSLDHIGPLARSADDLAQVYNALLGLDPADRFQADQP---- 245 Query: 254 ERALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 L ++ + P R+ Y + D+ + + A + L + A Sbjct: 246 ---LRSTVASLANETPLRSRVLGGYFAQWCDEQAAAAVQQVATALQADDDAVLDNAALAR 302 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 A +I+S +E G L T + F + R++ G + + Sbjct: 303 TAAFIVSASEG-----------------GNQYLPALRATPGL-FEPLSRERLLAGAMIPA 344 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNS----- 423 + Y++A++ R +RD F D+++ P TP A +G++ N++ Sbjct: 345 -----AWYVQAQRFRDHFRRDVLALFAD-TDLLIAPATPCPATSIGQDTMRINHTDLPIR 398 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SMG + T ++ GLP ++VP + +P+G+QLI P+RE+ +E+ Sbjct: 399 ASMG-----MLTQPISFVGLPVVTVP-LVTASGLPIGVQLIAAPWREDVALRAAWRLEQ 451 >gi|46126255|ref|XP_387681.1| hypothetical protein FG07505.1 [Gibberella zeae PH-1] Length = 526 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 129/444 (29%), Positives = 203/444 (45%), Gaps = 31/444 (6%) Query: 64 INGDA---RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I+GD L G + +KDC A G+ S + P ++TV + + GAV+ G Sbjct: 92 IHGDKTSRSSLAGKSVCLKDCIAVAGVPQFFGSDAFPAWTPSTDATVVTRSLEAGAVITG 151 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + F +S+ TS G + +P ++ ++ GGS+ G +A V L +IGTD Sbjct: 152 TATCENFCNSTSSFTSAQGTIDNPRKA-----GYSAGGSTSGGAALVTSSLADIAIGTDQ 206 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PAS G VG KPT+G GI S D AG + RTV D A L IAGYD Sbjct: 207 GGSIRVPASLCGCVGFKPTHGLVPYTGISSGDQIDDHAGPLARTVDDIAACLDTIAGYDG 266 Query: 241 CDATCVN-LPVPDY---ERALDQSIQGMTVGIPKEYRLD--YLSPTIDKTWQQGISWLKD 294 D + P + E S+QG+ +G+ +E D + P + K + + ++ L+ Sbjct: 267 IDDRSLGAAPHGSFGFLESLNGASLQGVRIGVLEEGYDDNSLIQPGVKKIFLETVNRLES 326 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSI 353 GA I +IS+P + + I S+ + R GL + E + + ++ Sbjct: 327 LGAIIQDISIPIHKEGPSIWTIQQRISGSAGILGQANGRRGLYLTEFEQARLPWTASQFE 386 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 K+ ++ G Y+ R + Y + I + RD EA + D I+ PTTP A Sbjct: 387 KLFPSTKNTVINGLYL--QRTFPGLYSKTVNIGRQM-RDAYEAKFKEYDAIIMPTTPFVA 443 Query: 414 FPLGKEE----NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQL 463 G E + S+G N T N+ G PA+S+P + +P+GLQ+ Sbjct: 444 PRHGSRESVLKSFEPSIGMTNN---TAIFNVTGQPALSLPVGWSQAADDESVMLPVGLQI 500 Query: 464 IGQPFREETLFSVGQIIEKEAGYF 487 +G + E+ + + + +E G F Sbjct: 501 VGGLWEEKKVLRIAKALESSLGSF 524 >gi|209515203|ref|ZP_03264071.1| Amidase [Burkholderia sp. H160] gi|209504457|gb|EEA04445.1| Amidase [Burkholderia sp. H160] Length = 484 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 137/477 (28%), Positives = 210/477 (44%), Gaps = 69/477 (14%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA + A AAA+ D AR L G+PI +KD T G+ T A + L GF Sbjct: 45 NALTTLDFHGALAAAQRIDALPPTERARLPLAGLPIVVKDNINTAGLPTSAGTPALAGFV 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGG 158 P + Q+L D GA++LGK NM E A G S+N +++ GPV +P+ D T PGG Sbjct: 105 PKTNAPSVQRLVDAGAIVLGKANMHELAFGITSTNLSAHAGPVRNPY---DPT--LMPGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISF 211 SSGG++ A+A + A +GTDTGGS R PA+ TGT G +P+ G ++ Sbjct: 160 SSGGTAVAIAARIAPAGLGTDTGGSTRIPAALTGTAGFRPSVGNGGAERRYHDPDAVVPI 219 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + + D G + R+V D A+L I G LP ER + +G+P Sbjct: 220 SHTRDTVGPMARSVADLALLDGVITGDGA-------LPTVALER--------LRIGLPAP 264 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS---LPHTQYALPAYYIISPAEAS----- 323 D L +D + + L+ AG V ++ L H + I A Sbjct: 265 L-WDGLERQVDDVARAALQKLEAAGVTFVPVAMNELEHLNGMVGGPVAIHEARDDVLAWL 323 Query: 324 -SNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 +N A V +R+ D+ +Y++ + G + +Y R Sbjct: 324 VANQAPVQTVAELAVRIASPDVRAIYDDVLADVLGSHYTAAL--------------NYWR 369 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIYNDVF---- 434 R +++ + F A +D +L PTT A P+ + N S ++ G D Sbjct: 370 PR-LQSYMAATFANA---ALDALLFPTTRLVAVPI-DDLNGSSTVTIDGGPPIDTMEAFL 424 Query: 435 --TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 T + +G+P +SVPA + +P+GL+L G + L ++G IE+ G P Sbjct: 425 RNTDPASTSGIPGLSVPAGMSASGLPVGLELDGPLGSDRRLLAIGVAIEQVLGALPP 481 >gi|219848682|ref|YP_002463115.1| amidase [Chloroflexus aggregans DSM 9485] gi|219542941|gb|ACL24679.1| Amidase [Chloroflexus aggregans DSM 9485] Length = 526 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 143/490 (29%), Positives = 219/490 (44%), Gaps = 46/490 (9%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT-KGIHT 89 I+A+ + +NA IE+ + A +R +G L GIPI +KD T T Sbjct: 44 IEALNRAGPCLNAVIEISPSALKTAIALDTERNAHGPRSPLHGIPILLKDNIDTLDDTAT 103 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW--RS 147 A S L G RP E+TVT +L GAV+LGK NM E+A S +S S W R Sbjct: 104 TAGSLALLGSRPAAEATVTSRLRAAGAVILGKANMSEWANFRSTASS------SGWSARG 157 Query: 148 MDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 + + + +P GSS GS+ AVA +C +IGT+T GSI P++ G VGIKPT G Sbjct: 158 GQARNPYVLSRSPCGSSSGSAIAVAASMCVVAIGTETDGSISCPSALCGVVGIKPTVGLT 217 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV---PDYERALD-Q 259 SR G++ + + D G R V D+A +L IAG D D PDY L Sbjct: 218 SRAGVVPISFTQDTVGPHARCVADAATVLGIIAGPDPRDPATAAAAGHARPDYRTCLQAD 277 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYAL-PAYYII 317 +++G +G+ + R +++ + ++ + DAGA IV+ ++LP A A + Sbjct: 278 ALRGARIGVLRSDRFAGFGRHVEQAFANALTAMIDAGAHIVDPVTLPDDLLAFGEAELTV 337 Query: 318 SPAEASSNLARYDGVR-----------YGLRVEGKDILEMYENTRSIGFGQE-VKHRIMI 365 E L RY R + L E E + FGQE + + Sbjct: 338 LIYEFKDTLNRYLASRVPDPQATDPPPHSL-AELIVFNERHAEHELRFFGQELLLQAAAV 396 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G L+ Y + +R T+ + T +E+ +D ++ P T A+P+ Sbjct: 397 GD--LNDPAYQQALVASRD--TVRQALDTVLYEKQLDALVAPAT-GLAWPIDL------I 445 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 G Y + AG P ++VPA + +P+ + IG + E L + E+ Sbjct: 446 AGDRYPGGSSSLAARAGYPMVTVPAGMA-FGLPIAINFIGGAWSEPMLIRLAYAFEQATR 504 Query: 486 YFRP--HKWW 493 + RP ++ W Sbjct: 505 WRRPPTYRLW 514 >gi|13507185|gb|AAK28498.1|AF315580_5 enantioselective amidase [Agrobacterium tumefaciens] Length = 517 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 117/425 (27%), Positives = 195/425 (45%), Gaps = 33/425 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G I IKD G+ S +L+G+ P ++T+ ++ D GA ++GK ++F+ Sbjct: 90 LKGDRIAIKDVVCVAGVPMMNGSKLLEGYVPEIDATIVTRMLDAGATIVGKSACEDFSFS 149 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T GPV +P+ D T PG SS GS+ ++ +IG D GGSIR P+++ Sbjct: 150 AGGMTCSTGPVGNPY---DPTRN--PGASSNGSAVLISTGQVDLAIGGDQGGSIRLPSAW 204 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPTYG G +LD G + + + A LL IAGYD D V Sbjct: 205 CGVYGLKPTYGLVPYTGCAMIEGTLDHVGPMASSPKGIAKLLSVIAGYDADDPRQQGRIV 264 Query: 251 P----DYERALDQSIQGMTVGIPKE-YRLD------YLSPTIDKTWQQGISWLKDAGAKI 299 P +Y AL++ ++GM + I KE + D P +D + + + GA++ Sbjct: 265 PGFDTNYLPALERGVKGMKIAILKEGFGHDGSDGMLASDPLVDDCVRSAMETFRGLGAEV 324 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE------NTRSI 353 E+S+P A + I ++ +GV G G M E +R Sbjct: 325 AEVSIPEHLTAWHIWTAIGLEGFTAFGVNGNGV--GTNWNGWYNTSMAEYLARAMKSRPY 382 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 V+ ++ G Y ++ +Y +A+ R LI + + D+I+ PT P Sbjct: 383 DMPATVRSVLIRGEY-FRRYYHNRYYGKAQNQRHLINEAYDRVLSE-YDIIVCPTIP--G 438 Query: 414 FPLGKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P + ++G++ + N + T ++ G P++SVP L E +P+G+ L + F Sbjct: 439 LPTKMVDRDAGTLDTVVNQLNQLRNTAVCDLTGHPSMSVPCGLRE-GLPVGMMLTAKHFD 497 Query: 470 EETLF 474 + TL Sbjct: 498 DATLI 502 >gi|124359218|gb|ABN05729.1| Amidase [Medicago truncatula] Length = 632 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 114/394 (28%), Positives = 185/394 (46%), Gaps = 44/394 (11%) Query: 104 ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS 163 ++ +L G + +GK NM EF MG++ S YG +P + D++T GGSS G Sbjct: 255 DAVCVSRLRSCGVIFIGKTNMHEFGMGTTGNNSNYGTARNP----HAPDRYT-GGSSSGP 309 Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 +A VA LC+A++GTD GGS+R P+S G VG+K YGR S G + + +++ G I Sbjct: 310 AAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKINYGRTSMEGSLCDSGTVEVIGPIAS 369 Query: 224 TVRDSAILLKAIAGYDECDATCVN-----LPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 TV D+ ++ A+ G + + LP + D +++ + +GI + + S Sbjct: 370 TVEDAMLVYAAMLGASPANRISMKPSTPCLPTLSSDDDTD-ALRSLRIGIYTPWFNNVHS 428 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 + + ++ L A V + + +++S + D Sbjct: 429 TEVSDKCEDALNLLSKAHGCEVVEVVIPEIVEMRTAHLVSIGSECLSSLNPD------IE 482 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 +GK + Y+ S+ Q + Y+ A+ IR I F E F+ Sbjct: 483 DGKGVKLSYDTRTSLALFQSFTA---------------ADYVAAQCIRRRIMHYFMEIFK 527 Query: 399 QGVDVILTPTT-------PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 + VDVI+TPTT P SA G E + + G++ F V N+ GLPAISVP Sbjct: 528 K-VDVIVTPTTGMTAPRIPPSALKSG--ETDMPTTGYLMR--FVVPANLLGLPAISVPVG 582 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ +P+GLQ+IG+P+ E T+ V +EK G Sbjct: 583 YDKEGLPIGLQVIGRPWAEATILRVAAAVEKLCG 616 >gi|295688510|ref|YP_003592203.1| amidohydrolase, AtzE family [Caulobacter segnis ATCC 21756] gi|295430413|gb|ADG09585.1| amidohydrolase, AtzE family [Caulobacter segnis ATCC 21756] Length = 464 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 47/496 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 ++F++ + ++R D++A + ++ + +IE + +NA+ V A++A AAA+ D Sbjct: 1 MSFLSAFDIAAQVRDGDVTARAITEATLASIEKRDGALNAFTAVSAERALAAADAVDAAR 60 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGK 121 G L G+P +K+ F + + T A S I + P ++T+ Q+L GA+++G Sbjct: 61 AAGQPLGALAGVPFAVKNLFDIESLPTLAGSKIRREAAPPTRDATLVQRLTAAGAILVGA 120 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 LNMDEFA G E ++ GPV +P D T GSSGGS+AAVA L ++G+DT Sbjct: 121 LNMDEFAYGFVTENAHDGPVRNPH---DPTRIAG--GSSGGSAAAVAAGLVPLTLGSDTN 175 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-E 240 GSIR PA G G+KPTYGR SR G+ F SLD G R+V + A+ + G D E Sbjct: 176 GSIRIPAGLCGVFGLKPTYGRLSRQGVFPFVESLDHVGPFARSVEELALAYDVLQGPDRE 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI--SWLKDAGAK 298 D CV + E P RLD L+ ++ + G+ W + Sbjct: 236 GDPICVR----EAE--------------PLTGRLDALA---EQPLRVGVLGGWFQQGAFP 274 Query: 299 IVEISLPHTQYALPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 V +L AL A +I ++ A + + EG ++ R++ + Sbjct: 275 DVLAALDRVAQALSADTDVILSGAQAARAAAFCLTAF----EGGELHHDDLAVRAMDYDP 330 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 V+ R++ G +L ++ AR+ RT+ + + + F++ DV+L P + A P+G Sbjct: 331 AVRDRLLAGA-LLPQGVAEA----ARRYRTIFRDEVAKVFQR-YDVLLAPASVCPAPPIG 384 Query: 418 KEENN-SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + G + ++ FT ++ GLP ++ P ++P+G+Q+I P+RE+ F Sbjct: 385 QATMEMDGVPVSVRKNLGAFTQPISYIGLPVVAAPVNR-PGQLPIGVQIIAPPWREDLAF 443 Query: 475 SVGQIIEKEAGYFRPH 490 + +++ AG H Sbjct: 444 AAALRLQR-AGVVAAH 458 >gi|115397409|ref|XP_001214296.1| predicted protein [Aspergillus terreus NIH2624] gi|114192487|gb|EAU34187.1| predicted protein [Aspergillus terreus NIH2624] Length = 499 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 139/509 (27%), Positives = 222/509 (43%), Gaps = 69/509 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +S LR S V +Y+ I N ++A I V A E+ K+ Sbjct: 6 LTISRFHAALRQGRTSIAATVSAYLTQITRHNPTLHALITVNPN----ALSEAQKKDAAL 61 Query: 67 DARD-------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 D R L G+PI +KD + T G+ T + L+ + + V L GA++L Sbjct: 62 DCRSAYTPLPRLHGVPIILKDTYTTAGLRTTSGVRALETLQTATNAAVVDALLSQGAIIL 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K N+ EF + +S G ++P+ D T TPGGSSGG++AA+A + G D Sbjct: 122 AKANVHEFCLQGVTASSIQGQTLNPY---DPTR--TPGGSSGGTAAALAANMGLVGCGGD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T S+R PAS VG +PTYG+ SR GI+ + D G + RTV D +L + G D Sbjct: 177 TMNSLRSPASACAIVGFRPTYGQVSRRGIVPVTETQDVVGPMGRTVADVRVLFGVMRGED 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS---PTIDKTWQQGISWLKDA- 295 DA VN P R + VGI ++Y D + ++ T + +++ Sbjct: 237 RYDAATVN---PSRHRTPSPHKPRLRVGILRDYFGDADTDDGAVVNSTIADALRRMREQK 293 Query: 296 -GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT--RS 352 KI LP LP + I + +A++++ ++ R L+ E+T RS Sbjct: 294 ISCKIEFTELP----PLPEWDIPT-LQATADMQAFE-----FREVFDAFLQSVEHTPHRS 343 Query: 353 IG--FGQEVKHRIMI-----------GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 + + HR + G + SS Y S R R+I L KR F + Sbjct: 344 LASIVASGLYHRDAVTPVLYQTLQDDGVFTTSSAEYQS---RLRRIEAL-KRSVENVFTK 399 Query: 400 -GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL------ 452 +D ++ P P+ GSM + A + G PA+ +PA Sbjct: 400 YDLDALVYPHQRQLVAPV-------GSMVQPGRNGLLAA--LTGRPAVCLPAGFSPPSPT 450 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +P+GL+L+GQP++++ L ++ + E Sbjct: 451 APQGIPIGLELMGQPWQDDELLNLAEHFE 479 >gi|330819708|ref|YP_004348570.1| amidase [Burkholderia gladioli BSR3] gi|327371703|gb|AEA63058.1| amidase [Burkholderia gladioli BSR3] Length = 523 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 164/493 (33%), Positives = 238/493 (48%), Gaps = 65/493 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I AI+ ++N+ IE+ ARA A D G R L G + IKD AT + Sbjct: 53 IDAIDRRGPRLNSLIEL-NPDARAIAATLDAERRAGRLRGPLHGTALVIKDNLATGDRMS 111 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG ++ + +L + GAV+LGK N+ E+A + S+ TS + R+ Sbjct: 112 TTAGSLALDGVHATRDAFLVARLREAGAVILGKTNLSEWANIRSTRSTSGWSGRGGLTRN 171 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A +IGT+T GSI PAS G VG+KPT GR SR G Sbjct: 172 PHALDRNT-SGSSSGSAAAVAAGLAAMAIGTETDGSITSPASINGIVGLKPTVGRVSRDG 230 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP-DYERALD-QSIQGMT 265 I+ + + D G +TRTV D+A LL AIAG D DA + P P DY ALD Q+++G Sbjct: 231 IVPISFTQDTPGPMTRTVADAARLLAAIAGTDPRDAATHDAPPPDDYLAALDSQALRGAR 290 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHT--------------QYA 310 +G+ +EY + ID ++ I+ L + GA +V+ I LP ++A Sbjct: 291 IGVAREYFTSH--DEIDGEIERAIAQLIELGATLVDPIELPKLHIGDEEMSVLLHEFKHA 348 Query: 311 LPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS---IGFGQE--VKHRIM 364 LP + +PA +LA ++ E R+ FGQE V+ + + Sbjct: 349 LPLWLAQFAPAAPVKDLA--------------GLIAWNEANRAREMPWFGQELFVQAQAL 394 Query: 365 IGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSAFPLGKEENN 422 G L S Y A++ R + AF Q +D I+ PT T+ + N Sbjct: 395 GG---LDSEVYRKALASCAKQAR---ENGLDHAFRQHRLDAIIAPTGGTAWL---TDFVN 445 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 S G D F+ +AG P ++VPA + +P+GL +G + E L + G E+ Sbjct: 446 GDSAG----DGFSQPAAVAGYPHLTVPAGFV-RGLPVGLSFVGPAWSEARLLAYGYAFEQ 500 Query: 483 EAGY-----FRPH 490 + FR H Sbjct: 501 ATQWRRDPSFRAH 513 >gi|254786061|ref|YP_003073490.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901] gi|237685241|gb|ACR12505.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901] Length = 463 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 128/479 (26%), Positives = 220/479 (45%), Gaps = 50/479 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 ++ V+ ++ + I N +NA+ + ++A AAE ++ N L G +K+ Sbjct: 17 LNIVQNIEQQLDTIVQINPSLNAFTSISRRRAIEAAERLTEKQ-NLAEMPLAGATFAVKN 75 Query: 81 CFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 F G T A S + + P ++T+ ++L + GA++ G LNM E+A + E ++G Sbjct: 76 LFDIAGEVTLAGSKLNERHSPASQDATLIERLENAGAILTGALNMGEYAYDFTGENCHHG 135 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +P++ +D + GS+ +A + F S+G+DT GSIR PASF G G+KPT Sbjct: 136 NCGNPYK-LDHMAGGSSSGSAAAVAAGLVDF----SLGSDTNGSIRVPASFCGIFGLKPT 190 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 YGR R G F+ SLD G + R+ +D A + + GYD D CV +R Sbjct: 191 YGRLPRTGTFPFSDSLDHLGPLARSTQDLARVYDVLQGYDGGDHACV-------DRHSSH 243 Query: 260 SIQGMTVGIPKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVEIS---LPH-TQYALPAY 314 ++ + +GI + R L + + + Q S + D K +++ +P A Sbjct: 244 TVSQLNLGI-QHLRFARLEGYFNCEHFPQARSAM-DKVCKALDVQEEIVPEGVTEGRSAA 301 Query: 315 YIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I+ E SS +L+R + +N F + + R + G + + Sbjct: 302 YLITNIEGSSLHLSR-----------------LQQNAEE--FDPDTRDRFLAGAMLPA-- 340 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND- 432 + Y+RA+++R + F + V+V++ P TP A G++ + Sbjct: 341 ---AWYIRAQQVRRWYQEKMLALF-KNVEVLIAPATPCVAPKQGQKTLKIAGEEQLLRPN 396 Query: 433 --VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 FT + GLP+I VP E MP+G+Q+I P+RE+ V +E F P Sbjct: 397 LGYFTQPFSAIGLPSIVVPTQDDETGMPIGIQIIAAPWREDICLRVAAYLEDAGFCFVP 455 >gi|192290053|ref|YP_001990658.1| amidase [Rhodopseudomonas palustris TIE-1] gi|192283802|gb|ACF00183.1| amidohydrolase, AtzE family [Rhodopseudomonas palustris TIE-1] Length = 458 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 143/487 (29%), Positives = 224/487 (45%), Gaps = 52/487 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M SE+ + ++ I+A+ ++ + I ++ +NA+ +VVA++ARA A E D I G Sbjct: 1 MTASETAAAVANRTITALAATEAALARIAKADVTLNAFTDVVAERARARAREIDAAIARG 60 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNM 124 ++ L G+P +K+ F G+ T+A S I P ++ + ++L GAV++G LNM Sbjct: 61 ESVGPLAGVPFAVKNLFDVAGLATRAGSKINRDRSPAAGDAPLIKRLEAAGAVLIGALNM 120 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E+A + E + GP +P T + G + + V ++G+DT GSI Sbjct: 121 GEYAYDFTGENIHDGPSRNPHDPTRMTGGSSGGSGAAVAGGEV-----PLALGSDTNGSI 175 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P+S G G+KPTYGR R G F S D G + R+ D A+ A+ G D+ DA Sbjct: 176 RVPSSLCGIFGLKPTYGRLPRTGSFPFVASFDHLGPLARSAADLALAYDAMQGPDDGDAA 235 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 C L Q I G+ + Y L P ++ + + A + L Sbjct: 236 CTTRASEPVSGLLAQGIDGLRIAKAGGYFETNLFP----EAREAVDRVVKALGITRSVEL 291 Query: 305 PHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P A A Y+IS E AS +L R LR + D F V+ R+ Sbjct: 292 PEAARARAAAYVISTTEGASLHLDR-------LRRQPND------------FDPAVRDRL 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK----- 418 + G V +S RA+K R + E FEQ VDVI+ P TP A LG+ Sbjct: 333 LAGAMVPASLVD-----RAQKFRRWYRARVLELFEQ-VDVIIAPATPCVAPKLGQVTFTL 386 Query: 419 ---EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E ++G + T ++ GLP ++ P L + +P+G+Q+I P+RE+ Sbjct: 387 DGVELPVRANVG-----IHTQPISFIGLPVVAAPIPL--EPLPIGVQIIAAPWREDIALR 439 Query: 476 VGQIIEK 482 V +E+ Sbjct: 440 VAAALER 446 >gi|167573942|ref|ZP_02366816.1| indole acetimide hydrolase [Burkholderia oklahomensis C6786] Length = 467 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 226/485 (46%), Gaps = 51/485 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ + R++ + VE + + IE ++A V + AR AA D +I G Sbjct: 17 IADAVNSGRTRAVRHVEAALARLALIE----PLDAMTHVAPEIARRAAAHVDAQIAGGRK 72 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P IKD T + T A S L GF +T Q+L D GAV LGK NM E A Sbjct: 73 LPLAGVPFVIKDNLFTADMPTHAASPALLGFNATRNATTVQQLLDAGAVPLGKANMHELA 132 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G ++ ++G V +P GGSSGG+++AVA + +GTDTGGS+R PA Sbjct: 133 FGITSANGHFGAVRNPHDPARIA-----GGSSGGTASAVAAGI-PFGLGTDTGGSVRIPA 186 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV----RDSAILLKAIAGYDECDAT 244 +F G G++PT R S G+++ +P+ D G I + A+L + DAT Sbjct: 187 AFCGVAGLRPTPRRYSTEGVLALSPTRDTVGTIAHGIDDLLLLDAVLTR--------DAT 238 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 P P ++ G+ +G+P D L P + + ++ ++ L AGA+++ + Sbjct: 239 ---EPAP-------LALAGLKIGVPDAPYFDGLDPAVAELTERALAALTGAGARLIPL-- 286 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRI 363 A A Y A +A ++ + Y R + + L E +G +V+H Sbjct: 287 -----AARALYETDDA-CGFAIAGFEALAYWRRFSAEQLGLPFAEFVARLG-SDDVRH-- 337 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN 422 I ++ + Y A + I R + +AF + GVD I+ PT A + ++ Sbjct: 338 -IFRMLIDAPPSSDAYAAALGVLQDIVRWYDQAFHRTGVDCIVLPTAQCEAPRVADSGHD 396 Query: 423 --SGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVG 477 + ++ V T + G+P++S+PA L + MP+GL L G + L ++ Sbjct: 397 LPPDAAHALFARVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIA 456 Query: 478 QIIEK 482 + +E+ Sbjct: 457 REVER 461 >gi|326384806|ref|ZP_08206482.1| putative amidase [Gordonia neofelifaecis NRRL B-59395] gi|326196468|gb|EGD53666.1| putative amidase [Gordonia neofelifaecis NRRL B-59395] Length = 488 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 147/503 (29%), Positives = 226/503 (44%), Gaps = 60/503 (11%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR- 69 E D R + +S V++ + A+ + +NA+ V A AA+ +++R ++G Sbjct: 13 ELSDAYRRRILSPVDVAAETLAAVRRVDGSLNAFCLVDEPGALTAAKAAEQRYLDGTPLG 72 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHIL----DGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L+G+P IKD F T G+ T S +L DG P ++ G V+ GK Sbjct: 73 PLDGVPASIKDIFLTAGLPTHRGSRLLADADDGSPPTVDAPAVAATRAAGCVVFGKTTTP 132 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA ++ G +P+ + TPGGSSGGS+AAVA L S+GTD GGS+R Sbjct: 133 EFAWKGVTDSPLAGVTRNPYDP-----ELTPGGSSGGSAAAVAAGLGPLSVGTDGGGSVR 187 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+FTGTV +KPTYG F +L AG + RTV D+A L A+ D D + Sbjct: 188 IPAAFTGTVALKPTYGVVPMYPSSPFG-TLAHAGPMARTVTDAAAYLDALVRPDVRDWSA 246 Query: 246 VNLPVPDYE-----------RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 V E D+ + G+ V + P +++ + IS L+ Sbjct: 247 VPRSATSPEVGGFLAAAIDGTGSDRPLVGLRVAYSSDLGFGSTDPEVEREVRVAISELEQ 306 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNL-----ARYDGVRYGLRVEGKDILEMYEN 349 GA I E++L + + A++++ A A++ L A D V LR D L Sbjct: 307 LGASIDEVALGLSD-PVDAFHVLWFAGAAAVLKPFGEAAVDRVDPQLR----DAL----- 356 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 R GF + YL A +R + E E+ D+++TPTT Sbjct: 357 ARHGGFSAQ-------------------DYLDAVAVRMALGVHLGELHEE-YDLLVTPTT 396 Query: 410 PTSAFPLGKEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 P AF G + GS G + +T NM PA+SVP + + +P+G+Q++G Sbjct: 397 PIPAFAAGA-DVPPGSTGPDWTSWTPYTYLFNMTQQPALSVPCGVTDTGLPVGVQIVGPR 455 Query: 468 FREETLFSVGQIIEKEAGYFRPH 490 F + + G +++ G P Sbjct: 456 FADRRVMRTGAALQQVVGSRVPR 478 >gi|146343580|ref|YP_001208628.1| amidase [Bradyrhizobium sp. ORS278] gi|146196386|emb|CAL80413.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Bradyrhizobium sp. ORS278] Length = 475 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 142/474 (29%), Positives = 221/474 (46%), Gaps = 50/474 (10%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIG 77 + ++AVE D+ + I + +N++ ++ A++ARA A D I G L G+P Sbjct: 22 RKLTAVEATDAALARIAARDGVLNSFTDITAERARAKARAVDADIAAGKPVGPLAGVPFA 81 Query: 78 IKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +K+ F + T+A S I P +ST+ +++ GAV++G LNM E+A + E Sbjct: 82 VKNLFDVADLPTRAGSKINRDRAPAPRDSTLIERMEAAGAVLVGALNMGEYAYDFTGENI 141 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 + GP +P D T GSSGGS +AV G L ++G+DT GSIR P+SF G G+ Sbjct: 142 HDGPSRNPH---DPTRMSG--GSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCGIFGL 196 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPTYGR SR F SLD G R+V D A+ + G D DA C + Sbjct: 197 KPTYGRLSRARSFPFVMSLDHLGPFARSVEDLALAYDVMQGPDSDDAACTSRAPEPVSGQ 256 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 L Q + G+ + I + L P + + ++ LK +++E+ P A A Y+ Sbjct: 257 LSQGLDGLRIAIAGGHFQKNLFPEAAEAVSRVVAALK--VTQVIEV--PEAARARAAAYV 312 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 IS E +S D +R TR F V+ R++ G + + Sbjct: 313 ISTTEGAS--LHLDRLR----------------TRPDDFDPAVRDRLIAGAMIPAPMVD- 353 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--------EENNSGSMGH 428 RA+K R + E F + VDV++ P TP A LG+ E ++G Sbjct: 354 ----RAQKFRRWYRAKVLELF-RSVDVLIAPATPCVAPKLGQATFVLDGVELPVRANIG- 407 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T ++ GLP ++VP L MP+G+Q+I P+ E V +++ Sbjct: 408 ----IHTQPISFIGLPVVAVPIPLA--PMPIGVQIIAAPWCEHVALRVAHALQQ 455 >gi|330914382|ref|XP_003296615.1| hypothetical protein PTT_06758 [Pyrenophora teres f. teres 0-1] gi|311331176|gb|EFQ95307.1| hypothetical protein PTT_06758 [Pyrenophora teres f. teres 0-1] Length = 542 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 135/498 (27%), Positives = 229/498 (45%), Gaps = 42/498 (8%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD---- 60 N + +ESRD + ++AV V +I + + S+ ++ R + +E D Sbjct: 30 NGIPQNESRDY--HQLLAAVHDVAEHILQLPDYLSRADSDKYPRENIHRPSEDEQDYGHA 87 Query: 61 ---KRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 K +I G+ L G + +KD A + + + + P ++TV Q+ D G Sbjct: 88 WAHKFLIRGNPEGELLRGKTVSLKDNIAVARVPQFFGTDAIPAWTPDSDATVVQRALDAG 147 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A ++G + F +S+ TS G V +P+ ++ GGS+ G A V G L + Sbjct: 148 ADIVGTTICENFCNSTSSFTSAQGTVHNPYAR-----GYSAGGSTSGGCAVVGGGLVDIT 202 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IG D GGSIR P+SF G VG+KPT+G GI S D G I R V D A+ L AI Sbjct: 203 IGADQGGSIRVPSSFCGCVGLKPTHGLVPYTGISSGDAVSDHCGPIARCVTDVALCLDAI 262 Query: 236 AGYDECDATCVNLPVP---DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISW 291 G D+ D + PV Y + L S+ G+ +G+ KE + + P + +T ++ + Sbjct: 263 GGKDDYDDRTLGAPVHGSMQYTKHLKDSVAGLKIGVLKEGFEHRLVDPEVRETVRKAVKS 322 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDIL-EMYEN 349 + GA + E+SLP PA + I A + N+ Y R GL + + + N Sbjct: 323 FELLGATVEEVSLP-LHLEGPAIWTIQQRIAGTFNMLGYAHGRRGLFSTAYETARQPWTN 381 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 K+ ++ G + ++ Y Y + I ++ + + F++ D+I+ PTT Sbjct: 382 DTFQKLFPSTKNTMINGLSL--TQNYPGIYAKTMNIAQQLRDSYEKLFQE-YDLIVMPTT 438 Query: 410 PTSAFP-LGKEENNS------GSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------K 456 P A P + ++ +S SMG N T ++ G PA+S+P K Sbjct: 439 PFVAPPNVDWKQGDSPIDALKPSMGITIN---TAIFDVTGHPAMSLPVGFAPSNVDSSVK 495 Query: 457 MPLGLQLIGQPFREETLF 474 +P+G+Q++ ++E+ + Sbjct: 496 LPVGMQIVAGLWQEQKIL 513 >gi|167945213|ref|ZP_02532287.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 173 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 8/163 (4%) Query: 222 TRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS----IQGMTVGIPKEYRLDYL 277 R+ D+A+LL+A+AG+D D+T R L + +G+ +G+PKEY + L Sbjct: 3 ARSAEDAALLLQAMAGFDPKDSTSAECAGA---RLLSEPSTTPCEGLKIGLPKEYFGEGL 59 Query: 278 SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 + ++ + I+ K GA++VEISLP+T A+P YY+++PAE SSNL+R+DGVRYG R Sbjct: 60 DSAVAESVEAAIAEYKKLGAELVEISLPNTGLAVPTYYVVAPAECSSNLSRFDGVRYGYR 119 Query: 338 V-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 E KD+ ++Y+ +R GFG EVK RIMIG YVLS+ YD+ Y Sbjct: 120 CDEPKDLEDLYKRSRGEGFGAEVKRRIMIGAYVLSAGYYDAFY 162 >gi|296536066|ref|ZP_06898202.1| amidase [Roseomonas cervicalis ATCC 49957] gi|296263612|gb|EFH10101.1| amidase [Roseomonas cervicalis ATCC 49957] Length = 479 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 133/474 (28%), Positives = 219/474 (46%), Gaps = 48/474 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPI 76 S+ +S VE + + ++ + +N +NA+ ++ +A A A ES+ R G L+G+P+ Sbjct: 20 SRRLSPVEALQAVLERVARNNHWVNAFA-LLNPRALAQAGESEARWAAGRPMGPLDGVPV 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD +G+ T+ S ++ L GAV+LGK EF + + Sbjct: 79 TVKDLLNVQGMPTRRGSKTTAATPATEDAPAVIGLKAAGAVILGKTTTTEFGWKTPGDCP 138 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G +PW S + SS G++AA A IGTD GGSIR PA++ G VG Sbjct: 139 LHGITRNPWNSQRTVGG-----SSSGAAAAGAAGFGPLHIGTDAGGSIRIPAAYCGLVGF 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KP+YGR + +F + AG + R+VRD+A++L A+A D D CV+ P D+ Sbjct: 194 KPSYGRIPQWPHSAFG-QVSCAGPMARSVRDAALMLSAMAQPDIRDPYCVHEPPRDWREG 252 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI----SWLKDAGAKI--VEISLPHTQYA 310 L++ + G+ V + + RL Y +P ID + + L GA + + LP T+ Sbjct: 253 LEEGVAGLRVAVVR--RLGY-APPIDAEGEAAVLAAAQMLSRHGAIVEDADPELPDTRQI 309 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + ++ A + +A E + +L+ R + +EV R + V Sbjct: 310 FGRVWGVALARLVNTMA----------PEQRALLD-----RGL---EEVAEREGGMSAV- 350 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 +L A +RT F D++L PTTPT+AF + ++ Sbjct: 351 -------DFLGAEALRTEAAHAMAR-FHLKYDLVLCPTTPTAAF--DADAPTLKPTEALW 400 Query: 431 ND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 D +T A N+ PAI+VP L E MP G+QL R++ +++E+ Sbjct: 401 RDWAPWTFAFNLTRQPAITVPFGLDENDMPRGVQLAAAQLRDDLCLRAARVLER 454 >gi|91975523|ref|YP_568182.1| amidase [Rhodopseudomonas palustris BisB5] gi|91681979|gb|ABE38281.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 504 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 124/426 (29%), Positives = 203/426 (47%), Gaps = 24/426 (5%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L+G I +KD G+ S L+GF P +++TV ++ D G +LGK++ + F Sbjct: 85 AGKLKGKTIALKDNIMLAGVPMMNGSSTLEGFVPDFDATVVTRILDAGGEILGKVHCEHF 144 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 M + T GPV +P + M + + GS+ + A +IG D GGSIR P Sbjct: 145 CMSGGSHTGSNGPVHNPHK-MGYSAGGSSSGSAVVVALGEADM----AIGGDQGGSIRMP 199 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ASF+G G+KPT+G GI+ +D G +T V D+A+LL+ +AG D D Sbjct: 200 ASFSGIYGMKPTWGLVPYTGIMPIEVFVDHTGPMTANVADNALLLEVLAGDDGYDPRIRA 259 Query: 248 LPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + DY +AL I+GM +GI +E + P ++++ + L GA + EIS+P Sbjct: 260 PKLHDYTKALGGGIKGMKIGIVREGFEQAGAEPGVNESVRGAAKRLAGLGATVEEISIPA 319 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTR--SIGFGQEVKH 361 A + I + + DG YGL + +++ + R + + K Sbjct: 320 HNLAGAVWMPIGTEGMTQTMMFGDG--YGLSRPDLYSTALMKAHRGWRGQADSLSETTKM 377 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 ++ GTY+ ++ +Y +A+ I I + +A D++L PTTP A PL + Sbjct: 378 MLLFGTYI-NNTFGPRYYGKAQNISRRIGAAYDQALAS-FDLLLMPTTPMKATPL---PS 432 Query: 422 NSGSMGHIYNDVFTVAVNMAGL-----PAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 S I F + N A PA+S+P + + +P+GL L+G+ F E T++ Sbjct: 433 PGASREEIIGRAFEMISNTAPFDITHHPAMSIPCGMVD-GLPVGLMLVGKHFDEPTIYRA 491 Query: 477 GQIIEK 482 E+ Sbjct: 492 AHAFEQ 497 >gi|262279134|ref|ZP_06056919.1| indoleacetamide hydrolase(IAH) [Acinetobacter calcoaceticus RUH2202] gi|262259485|gb|EEY78218.1| indoleacetamide hydrolase(IAH) [Acinetobacter calcoaceticus RUH2202] Length = 486 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 137/489 (28%), Positives = 226/489 (46%), Gaps = 59/489 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 +R + +S ELV Y IE S +NA+I + A A+ DK +++G L G+ Sbjct: 28 IRDRKVSCEELVHHYFATIEKQQS-LNAFISIDKASAIQQAQYWDKYLLSGKPCPALMGV 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD +G A + L F+P + + QKL D+GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVEGFPNSAGTPALANFKPQSSAPIIQKLIDHGAIIVGKTNMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ +++ GGSS GS+ AVA + +IGTDTG SIR P++ G Sbjct: 147 NTAMHIEGVVGTRNAVNPL--HIAGGSSSGSAVAVAAGMVQIAIGTDTGASIRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG +PT GR S+ I + + D AG I TV D IL+ + + P Sbjct: 205 CVGFRPTVGRYSQESITPISHTRDTAGPIAHTVSD-IILIDHLITQE-----------PK 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ---Y 309 E I+ +GI Y ++L + + + LKDAG +IV + +P+ + + Sbjct: 253 KESLQPHQIR---LGI-NPYFWNHLDEDVHQQAHIALGLLKDAGVEIVTVDMPNLEQLNH 308 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-LEMYENTRS-----IGFGQEVKHRI 363 A+ +I +YD ++Y L+ D+ LE N S F Q + ++ Sbjct: 309 AISFPVVIYE-------GKYDLIQY-LKHHHIDLTLESVINQISSPDVQALFKQNILPQL 360 Query: 364 M---IGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + G V Y+ AR ++ L + F + +L PT+ A PL E Sbjct: 361 IQDQTGQLVPVLPLYEKAMREARPQLLELYQNTFR---AHNLHALLFPTSAIIA-PLVNE 416 Query: 420 ENNSGSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEK-KMPLGLQLIGQPFREETL 473 + +S + T+ N GLP +S+P K ++P+GL++ G P ++ + Sbjct: 417 QVSS------IENFQTLIRNTDPGSNIGLPGLSLPIGKGAKSQLPIGLEIDGLPHQDSEI 470 Query: 474 FSVGQIIEK 482 ++G+ +E+ Sbjct: 471 LAIGETLEE 479 >gi|148547943|ref|YP_001268045.1| amidase [Pseudomonas putida F1] gi|148512001|gb|ABQ78861.1| Amidase [Pseudomonas putida F1] Length = 504 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 113/423 (26%), Positives = 208/423 (49%), Gaps = 24/423 (5%) Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++ L G + +KD + G+ + L GF P +++TV +L D G +LGK Sbjct: 80 VMGASTGKLLGKTVALKDNISLAGVPMMNGAAPLAGFVPSFDATVVTRLLDAGVTILGKA 139 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + + + ++ TS PV +P R ST SS GS+A VA ++G D GG Sbjct: 140 TCEHYCLSGASHTSDPAPVHNPLRPGFSTGG-----SSSGSAALVAAGEVDLAVGGDQGG 194 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA++ G G+KPT+G G+++ + D G +T VRD+A++L+ +AG D D Sbjct: 195 SARIPAAWCGIYGMKPTFGLVPYTGVMAIEATFDHVGPMTSNVRDNALMLEVMAGADGLD 254 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V Y L++ ++G+ +GI ++ ++L L + +T + I+ + GA + E Sbjct: 255 PRQGVPEVDTYANYLERGVRGLRIGILQQGFQLANLDQRVGETVRSAIARFEALGAVVEE 314 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRSIGFG 356 +S+P A + I + + +G G +G + + + T++ Sbjct: 315 VSVPEHTLAGSLWSPIGCEGLTMQMMHGNGA--GFNWKGLYDVALLDKQAGWRTQADALS 372 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +K +++G + L + +Y +A+ I + + +A E+ D+++ PT P A PL Sbjct: 373 PSLKLCMLVGQFGL-EHYHGRYYAKAQNIARFARAGYDKALER-YDLLVMPTVPIIAQPL 430 Query: 417 GK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E+ S ++ + N T A ++ G PA+S+P L + +P+GL L+G+ + E Sbjct: 431 PAPGCSITESVSRALEMLGN---TAAQDITGHPAMSIPCGLVD-GLPVGLMLVGKHYAEG 486 Query: 472 TLF 474 T++ Sbjct: 487 TIY 489 >gi|330819970|ref|YP_004348832.1| amidase [Burkholderia gladioli BSR3] gi|327371965|gb|AEA63320.1| amidase [Burkholderia gladioli BSR3] Length = 508 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 118/425 (27%), Positives = 205/425 (48%), Gaps = 19/425 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD + G+ + + +G+ P ++TV +L D GA + GK + + Sbjct: 88 LRGRTIAIKDNISVAGVPMRNGASTFEGYVPDVDATVVTRLLDAGATIAGKSTCEYYCFS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS GPV +P ++ S+ SS GS+A VA ++G+D GGS+R P+++ Sbjct: 148 GGSHTSASGPVQNPRKAGHSSGG-----SSSGSAALVAAGEVDMALGSDQGGSVRIPSAY 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KPT+G G + ++D G +TR+V D+A LL IAG D D LP Sbjct: 203 CGVYGMKPTHGLVPYTGAMPIEATVDHLGPLTRSVLDNARLLDVIAGDDGLDPRQRALPP 262 Query: 251 -PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D +D+ + G+ +GI +E + L +D+ L+ GA + E+S+P Sbjct: 263 RADLLDGIDKGVAGLRIGILREGFGLANSESVVDEAVLAAAHRLRKLGAIVEEVSVPLHA 322 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-----TRSIGFGQEVKHRI 363 + I+ A+ + + G +G G + M ++ R+ VK + Sbjct: 323 SGTAIWLPIAAEGATQQMMK--GNSHGFNWRGLYMTGMIDHHAGWRERANELPDTVKVTM 380 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NN 422 ++G Y +SR +Y + + + ++ D+ A Q D++L PT P A L Sbjct: 381 LLGEY-FTSRYRGRYYAKCQNLARRLRADYDAAL-QMFDLLLMPTVPIRASRLPAPGCTM 438 Query: 423 SGSMGHIYNDVFTVA-VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S S+ + + A +++G PA+S+P + E +P+GLQL+G+ F E T++ E Sbjct: 439 SDSLTRAFEMLANTAPFDVSGHPAMSLPCGVAE-DLPIGLQLVGRCFDEATIYRCAFAYE 497 Query: 482 KEAGY 486 + + + Sbjct: 498 QSSDW 502 >gi|241666612|ref|YP_002984696.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862069|gb|ACS59734.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 456 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 129/479 (26%), Positives = 202/479 (42%), Gaps = 42/479 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+V++ ++ + VE+ ++ +I + + + ++ +A A S +R+ G Sbjct: 8 MSVAQLSVLIQGGAVDPVEVTEAVFDSIAHYADK-AVFTTLLESRAMEEARASSRRLREG 66 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 + L +GIPI KD F +G+ T A S +L P ++ V L G V +G+ NM Sbjct: 67 RSLGLLDGIPIAWKDLFDMEGLPTTAGSVVLAKDMPAKRDAAVVALLRQAGMVAVGRTNM 126 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA +YG ++P R D PGGSS G+ VA L ++GTDTGGS+ Sbjct: 127 SEFAFSGLGINPHYGTPVNP-RGTDLPR--IPGGSSSGAGVVVAAGLVPVAMGTDTGGSV 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G VG K T GR + G+ A SLD G + R+VRD+ + A+ G D Sbjct: 184 RIPAAFNGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVRDAVWIDVAMRGLTAPD-- 241 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 V LP +QG+ + +P+ D P + ++ + L+ AGAK+ + Sbjct: 242 VVELP-----------LQGLELIVPENIVFDGAEPGVVAAFEAALERLQKAGAKVARTVI 290 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P P + A + R+ G D + HR++ Sbjct: 291 PAFDEIFELMTRYGPLVTAEAFALHRE-----RLAGPD-------------ADRMDHRVV 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + T L S+ YL R+ + D G ++ PT A P+G E + Sbjct: 333 MRTR-LGSKTTLPDYLAILDARSRLIADVERLV--GDRLLAFPTVAHVAPPIGPLEQDDE 389 Query: 425 SMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N T N +S+P E MP+GL L R+E L + E Sbjct: 390 LFFATNNKTLRNTALGNFLDWCGVSIPCGTGEAGMPVGLLLSATTHRDEALLGIALAAE 448 >gi|51595212|ref|YP_069403.1| amidase [Yersinia pseudotuberculosis IP 32953] gi|186894230|ref|YP_001871342.1| amidase [Yersinia pseudotuberculosis PB1/+] gi|51588494|emb|CAH20102.1| probable amidase [Yersinia pseudotuberculosis IP 32953] gi|186697256|gb|ACC87885.1| amidohydrolase, AtzE family [Yersinia pseudotuberculosis PB1/+] Length = 465 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 125/488 (25%), Positives = 211/488 (43%), Gaps = 39/488 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + + +SE + L ++SA + + AI +N +NAY + A + + A D Sbjct: 1 MKPASSLTISEIQQALHKSELSAQAIAQQTLDAITVANPLINAYTHITADRMLSEACRLD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVM 118 G L +P +K+ F G T S D ++ L GA++ Sbjct: 61 TLRAKGQPLPALAAVPYAVKNLFDVAGETTLSGASLFCDQAPAKQDAWAISCLSHQGAML 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P ++ + GGS+ +A + F S+G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATHNP-HDLNRIAGGSSGGSAAAVAAGLVHF----SLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR P+S G G+KPT+GR SR G F SLD G + R +D A++ + G Sbjct: 176 DTNGSIRVPSSLCGIFGLKPTFGRLSRRGTHPFVASLDHIGPMARCTQDLAVVYDVMQGI 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + PV + L + QG+ + Y + D + + + A Sbjct: 236 DTQDNFQADQPVTPCQNLLTRGQQGLRSAVLGGYFHQW----SDDDAKAAVLAVAKALEA 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 E+ +P + A A +IIS +E G L + F Sbjct: 292 NAEVEMPQSDLARSAAFIISASEG-----------------GNQYLPALRKSPQ-RFETL 333 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + + + Y++A++ R ++ FE D+++ P TP SA +G+ Sbjct: 334 SRERLLAGAMLPA-----TWYVQAQRFRHHFRQHILPLFEHW-DILIAPATPCSATLIGQ 387 Query: 419 EENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + M + T ++ GLP +SVP + +P+G+QLI P+RE+ Sbjct: 388 DTMRINDMDLPIRASMGILTQPISFLGLPVVSVPLK-TTRGLPIGIQLIAPPWREDLCLR 446 Query: 476 VGQIIEKE 483 +E++ Sbjct: 447 AAYALEQQ 454 >gi|325003677|ref|ZP_08124789.1| amidase [Pseudonocardia sp. P1] Length = 514 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 132/443 (29%), Positives = 207/443 (46%), Gaps = 36/443 (8%) Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I ++ L G + +KD A G+ S L+GF P ++TV +L D GA + GK Sbjct: 79 ITGSESGPLAGRTVAVKDNVAVAGVPMLNGSSSLEGFVPARDATVVTRLLDAGATVSGKS 138 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + + TS+ PV +PW + SS GS+A VA ++G D GG Sbjct: 139 VCENLCFSGGSFTSWPEPVRNPWDPARNAGG-----SSSGSAALVATGEVDLAVGGDQGG 193 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PASFTG VG KPT+G G ++D G +TRTV D+A +L +AG D D Sbjct: 194 SVRIPASFTGIVGHKPTFGLVPYTGAFPIEQTIDHLGPMTRTVADAARMLDVMAGVDGYD 253 Query: 243 ATCVNLPVP-DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + + P + AL+Q G+ +G+ E + P +D + + L AG Sbjct: 254 SRQPTVLAPAGHLAALEQGGAGLRIGVVAEGFGTPVSVPGVDGAVRAAVDALSAAGLSAE 313 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRSIGFGQ 357 E+S+P + A+ + +I+ A+ + DG YG+ G +++ Y R + G Sbjct: 314 EVSIPWHRDAMAVWNVIATEGAAYQM--IDGNGYGMGAFGLYDPELIAHYARGR-LERGS 370 Query: 358 EVKHRI-MIG-----TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT--- 408 E+ + ++G TY L Y Y AR + ++ + +A DV++ PT Sbjct: 371 ELSKTVKLVGLSGRYTYELGGGRY---YAMARNLSYELRAAYDDALST-YDVLVMPTLPY 426 Query: 409 ----TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 P S PL + + SM I N T ++ G PA SVPA L E +P+G+ ++ Sbjct: 427 VARELPPSDVPLAGYLDTALSM--IGN---TAPFDVTGHPACSVPAGLVE-GLPVGMMVV 480 Query: 465 GQPFREETLFSVGQIIEKEAGYF 487 G+ F + T+ V E+ G F Sbjct: 481 GKRFDDATVLRVANAHEQLVGGF 503 >gi|118469869|ref|YP_888260.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] gi|118171156|gb|ABK72052.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] Length = 467 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 124/472 (26%), Positives = 210/472 (44%), Gaps = 39/472 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 +RS+ +S VE+V +++ IE N ++NA + VA++A A A ++ ++ GD L G+ Sbjct: 17 IRSRQLSPVEVVQAHLDRIEAVNPKINAIV-TVAERALAQARSAEAAVMRGDDLPPLHGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD T + TQ S I G P ++ +L GA++L K N+ EF+ + + Sbjct: 76 PFTVKDSIDTADVLTQRGSPIFAGRIPQTDAVSVARLKAAGAIVLAKTNLPEFSYSTETD 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +PW ++D TPGGSSGG SAA+A L +GTD S+R PA+ TG Sbjct: 136 NLLTGRSNNPW-NLDR----TPGGSSGGESAAIAAGLSPLGLGTDLAISVRGPAAQTGIA 190 Query: 195 GIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +K T+GR G+ P G + RTVRD A+ + +AG D DA ++ P Sbjct: 191 ALKATHGRIPMTGVWPRVPRRFWHVGPMARTVRDLALAYELLAGPDGADAFAIS---PVR 247 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ--YAL 311 A ++ + VG E + + T + L G + + +P + +AL Sbjct: 248 FDAGTAAVDSLRVGWLVEPGFGPIDAEVAATVRAAAEALSSIGLAVEPVRIPALERDFAL 307 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + E A G+ E++ ++ I + + Sbjct: 308 DVFMRLHVMELKPAFAEA--------TAGRGDEELFAISKRI---------------LAT 344 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN--NSGSMGHI 429 ++ A + ++ F + F + D +L P P A +E N ++ Sbjct: 345 PDTSIQDFVEAEQAGERLRDGFADYFSR-YDALLAPVLPVPAHEHRAKEFDINGQTVDAT 403 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 Y TV N+ GLPA+S+ +P+ +QLI E T+ ++ ++E Sbjct: 404 YIMGATVPFNVTGLPALSLRFGTSSAGLPINVQLISTWLAESTVLNLASLLE 455 >gi|90418559|ref|ZP_01226471.1| putative amidase [Aurantimonas manganoxydans SI85-9A1] gi|90338231|gb|EAS51882.1| putative amidase [Aurantimonas manganoxydans SI85-9A1] Length = 469 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 135/474 (28%), Positives = 207/474 (43%), Gaps = 53/474 (11%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCF 82 V +VD + I + +NA++ ++ AR A S R +G L+G+PI +KD Sbjct: 28 VAIVDLCLARIARIDPSLNAFV-CLSPTARDEAAASAARWRSGAPIGPLDGVPIAVKDNL 86 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 KG+ S + + ++L D GA+++GK N EFA+ +G Sbjct: 87 VVKGMPATFGSRLYASTIAARDELPIRRLRDAGAIVIGKTNTPEFAVEGYTSNDLFGVTR 146 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +PW TPGGSSGGS AAVA L +IGTD GGS R+PA++TG VG+KP G Sbjct: 147 NPW-----APALTPGGSSGGSVAAVAAGLVPVAIGTDGGGSSRRPAAYTGLVGVKPGIGH 201 Query: 203 CSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R G+ + G TR+ RD+A+L +AG D D P A D+ + Sbjct: 202 VPRADGLPQVLLDFEVVGTFTRSARDAALLDSVLAGPDRADPASR---CPPDAPAADRPL 258 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 + + V + + +P I G ++ LP L A + Sbjct: 259 RILLV---ERIDANPCAPEILTALHAAADAFAALGHRVTCTELPFDSAGLAAIW------ 309 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD---SH 378 S++A G+ L VE F +V + + ++ R D S Sbjct: 310 --SSIAEI-GLARLLAVEPD-------------FADKVNPKYV----AMARRGADWSASD 349 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSA---FPLGKEENNSGSMGHIYND 432 L + ++R ++ F D+IL P P +A FP + + G GH Sbjct: 350 LLGILETVAALRRQVSQGFAD-FDLILMPACAAMPWAADTPFPDRIDGHTVGPRGHA--- 405 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 V+T VN AGLPAI++P + +P+G+QLIG E TL ++ E+ + Sbjct: 406 VYTGWVNAAGLPAIALPCPVPSGTLPIGVQLIGDRGAEPTLLALAAAYEERCPW 459 >gi|325675823|ref|ZP_08155507.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus equi ATCC 33707] gi|325553794|gb|EGD23472.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus equi ATCC 33707] Length = 475 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 138/505 (27%), Positives = 225/505 (44%), Gaps = 71/505 (14%) Query: 10 SESRDRLRS---KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 S +RD R+ +++SA +++ ++ I N N++ NA + V A++A AAA+ D+R+ +G Sbjct: 11 STARDIARAVAGREVSARAVIEEHLDHIGNCNARWNAVVTVPAEQALAAADRLDRRLAHG 70 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P +KD AT G+ T A S L G P ++ + GA+++GK N Sbjct: 71 DPVGPLAGVPFTVKDLIATAGVRTTAGSRALAGNVPAADAPAVAAMKRAGAILVGKTNTP 130 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF +G +P + D +PGGSSGG +AA+A + A +GTD GGS+R Sbjct: 131 EFGASGLTHNDLFGYTRNPLGT--EADPRSPGGSSGGEAAALAAGMSAVGLGTDFGGSVR 188 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA--------------GIITRTVRDSAIL 231 PA TG I+PT GR S G + D+ G + RT+ D+A++ Sbjct: 189 WPAHCTGLSSIRPTSGRVSADGQYPGVAAGDRVLANPATVHGVVQTIGPLARTLDDAALV 248 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L+ + S + P + +D L D TW G Sbjct: 249 LRVV------------------------SSRRFRWADPADVEVDGL----DITWAGGEGT 280 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENT 350 + + ++ T L A A S L R + + LR E +E Y Sbjct: 281 VPVEAGIVAAVA--ETAGGLGARRY-----AGSALPRANDLFGRLRATETAADIEAYGAP 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--EQGVDVILTPT 408 FG +++ + + S R D L A+++R T A E G DV++ P Sbjct: 334 SD--FGADIRAVLAAASERRSHR--DVEELWAQRVR------LTAALLDEMG-DVLVLPV 382 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +A PLG + + D A+++ GLP++ VP A +P+G+Q+I + Sbjct: 383 ASITAPPLGLDTFTVDGHSLTWQDALACCRAISVTGLPSVVVPVATAADGLPIGVQVIAR 442 Query: 467 PFREETLFSVGQIIEKEAGYFRPHK 491 P++E +V + + + Y PH+ Sbjct: 443 PWQEHVALAVAHRVRRTSTYRSPHE 467 >gi|331697047|ref|YP_004333286.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326951736|gb|AEA25433.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 509 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 124/432 (28%), Positives = 202/432 (46%), Gaps = 30/432 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD + G+ S ++GF P ++T ++L D GAV+ GK ++ Sbjct: 82 LAGRTVAIKDNVSVAGVPMANGSATVEGFVPTRDATTVRRLLDAGAVITGKAVCEDLCFS 141 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS PV +PW + SS GS+A VA ++G D GGS+R P+SF Sbjct: 142 GASFTSKPHPVRNPWDPARNAGG-----SSSGSAALVATGEVDLALGGDQGGSVRIPSSF 196 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TCVNLP 249 GTVG KPT+G G ++D G ITRTV D+A++L +AG D D ++ Sbjct: 197 CGTVGHKPTFGLVPYTGAFPIETTIDHLGPITRTVADAALMLDVLAGPDGQDPRQPTSVE 256 Query: 250 VPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY AL +S G+ +G+ E + P +D + + L G E+S+P Sbjct: 257 KVDYSAALAESAAGLRIGVVTEGFGHPNSDPEVDAAVRAAVEVLCSVGLAAEEVSIPWHL 316 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTRS---IGFGQEVKHR 362 A+ + +I+ A+ + DG YG+ G +++ Y R+ + VK Sbjct: 317 EAMHVWNVIATEGAARQM--VDGNAYGMNWSGLYDPELIAHYRRGRAERGAELSKTVKLV 374 Query: 363 IMIG--TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 M G T+ ++ Y Y A+ + ++ + A + DV++ PT P +A + + Sbjct: 375 AMSGRHTFAVAGGAY---YAMAQNLVPEVRAAYDAALAEH-DVLVMPTLPYTAREIPATD 430 Query: 421 NNSGS-----MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + G+ + I N T ++ G PA SVP L +P GL ++G+ F + T+ Sbjct: 431 ADLGTYLDTALSMIAN---TAPFDVTGHPACSVPTELV-GGLPAGLMIVGKHFDDATVLR 486 Query: 476 VGQIIEKEAGYF 487 V E+ G F Sbjct: 487 VAHTYEQARGGF 498 >gi|325273297|ref|ZP_08139574.1| putative amidase [Pseudomonas sp. TJI-51] gi|324101582|gb|EGB99151.1| putative amidase [Pseudomonas sp. TJI-51] Length = 469 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 135/479 (28%), Positives = 212/479 (44%), Gaps = 39/479 (8%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-A 68 +E + + + +S VE+VD + I+ N +NAY V + A AAA S++R G+ Sbjct: 13 AELLELYQRRQLSPVEVVDDVLARIDQHNPAVNAYCHVDGEGALAAARASEQRWQRGEPC 72 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEF 127 L+G+P IKD T+G+ T+ S P ++ + + + GAV++GK EF Sbjct: 73 GRLDGLPASIKDLTLTRGMPTRKGSRTTSAAGPWEVDAPFSAFMREAGAVLVGKTTTPEF 132 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + YG +PW + + T GGSSGG++AA A L G+D GGSIR P Sbjct: 133 GWKGVTDNPLYGITRNPWNT-----RLTAGGSSGGAAAAAALNLGVLHQGSDAGGSIRIP 187 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 +FTGT GIKPT+G + + L G +TRTV D+ ++L +A D D Sbjct: 188 CAFTGTFGIKPTFGYVPQWPASAMT-VLSHLGPMTRTVDDAVLMLDCVARPDPRDG-LAG 245 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P Q + G+ + + + P I+ Q + L GA++ E+ Sbjct: 246 APRQAPWLGQQQDLNGLRIAYSANFGYVQVDPQIEALVAQAVQRLARLGAQVEEVD---- 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 P + P E + L R L E + +L+ +G+ E RI + Sbjct: 302 ----PGFS--DPLETFNTLWFAGAARLASALSDEQRALLD-----PGLGWIAEQGARISL 350 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 Y + L AR LI + AF Q DV+++P P AF G Sbjct: 351 SQY--------TQALEARA--ELIAK--MNAFHQRYDVLVSPMLPLVAFEAGHNVPPGSG 398 Query: 426 MGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 MG F+ N+ PA SVP + +P+GLQ++ F ++ + V ++ E+ Sbjct: 399 MGQWMEWTPFSYPFNLTQQPAASVPCGFTREGLPVGLQVVAGRFADDQVLRVCKVYEQH 457 >gi|310772416|dbj|BAJ23976.1| benzamide amidohydrolase [uncultured bacterium] Length = 458 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 127/501 (25%), Positives = 228/501 (45%), Gaps = 62/501 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 M+ +E+ + D S + + + E + + NA+I+ A + AA D+ R N Sbjct: 1 MSATEALRHMHQGDFSCEQYTQALVARTE-AVADTNAFIDFAATQVLEAARALDQARPRN 59 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L G+PI IKD T+ T A + ++ R H ++ + +L G +++GK N+ Sbjct: 60 GSLPPLWGLPIPIKDSVFTQDFPTTAGTSVIK-LR-HPDADLVTRLRRAGGLVMGKTNLH 117 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E + G ++ ++GPV +P+ + D+ GGSSGG++AAVA + DT GSIR Sbjct: 118 ELSSGFTSNNPHHGPVRNPY----APDRVA-GGSSGGTAAAVALGCAPLGVAEDTAGSIR 172 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG +PT GR G++ APS DQ G R V D + + + G +T Sbjct: 173 VPAALCGIVGFRPTLGRYPTTGVVPLAPSFDQVGPHARCVADIRLFDRVVKGRPGQSST- 231 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 S++ + +G+P+ Y D + + + + + + L+D G ++VE Sbjct: 232 --------------SLERIRLGVPRGYLYDNIEASAMQVFDKALEALRDCGVELVE---- 273 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI-- 363 H L LA Y + + E L+++ + +G Q V + Sbjct: 274 HDVSGL----------GDLLLASYGPILF---TEIGISLDVFFKEQGMGGLQAVIDKAGP 320 Query: 364 ----MIGTYVL-------SSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + T VL S++ Y ++ L +R + F ++ +D I+ PT Sbjct: 321 ETVGLYSTLVLEGAPAKPSAKVYQEAAALHRPALRQALAHYF---WQHQLDAIVYPTVRC 377 Query: 412 SAFPLGKEE--NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A +G +E N +G I++ + T+ A LP++++P ++P+ + L P Sbjct: 378 GAPEIGADETVNINGVSTSIFDALGHNTILAPAAELPSLTLPIGFDTDRLPVAMGLDALP 437 Query: 468 FREETLFSVGQIIEKEAGYFR 488 +E L ++G +E+ +R Sbjct: 438 GDDERLLALGAALERVVCAYR 458 >gi|88855288|ref|ZP_01129952.1| amidase [marine actinobacterium PHSC20C1] gi|88815195|gb|EAR25053.1| amidase [marine actinobacterium PHSC20C1] Length = 471 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 144/492 (29%), Positives = 219/492 (44%), Gaps = 45/492 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL+ + E LRS ++ ELV+ Y+ IE N ++ A+ V AR A E + Sbjct: 1 MSELHRLTALEQLHLLRSGELKPSELVECYLDRIERLNPELGAFTVVTPDAARQRAAELE 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 A L G+P G KD + G+ T S F P + L D GA+ LG Sbjct: 61 TS--GSRAATLWGLPSGEKDLWMRAGVRTAFGSRAFADFVPDVSDEIADVLDDAGAISLG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF + + E P ++PW GGSSGG++ AV+ L + G+D Sbjct: 119 KTATPEFGLPAYTEPLSDAPAVNPWDV-----SLGSGGSSGGAAVAVSAGLLPFAPGSDG 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ TG VG+KP+ GR L G + RTV D+A+LL IAG Sbjct: 174 GGSIRIPAAATGLVGLKPSRGRVPAGSGFGSLGQLPVTGPLARTVADAALLLDGIAGPSP 233 Query: 241 CDATCVNLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 V P D L+ +I+G +G+ + D T++ +S Sbjct: 234 F---SVGPPAWDGGAFLNAAIRGEGTFNIGV-------MTTSPWDDTYEISVSPEAQDAL 283 Query: 298 KIVEISLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IG 354 + +L + + + SP A + + G+ ++G+ LE+ E I Sbjct: 284 TLARTALDQLGHGSENFALDPSPEYAEAFTVLWQAGAAGIPLDGEQ-LELVEPLTKWLIE 342 Query: 355 FGQEVKHR-IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G+ + R + I LS R R++I R F+ D +LTP + Sbjct: 343 SGRRMSARDVGIAIATLS-----------RFERSVI-RQFS-----AYDAVLTPAMAMTP 385 Query: 414 FPLG---KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 PLG E+ + +T VN++GLPAIS+P + +P+G+QLIG+P RE Sbjct: 386 RPLGWFHAEDAFENFAKQVQYTPWTSFVNVSGLPAISLPVHETVEGLPMGVQLIGRPGRE 445 Query: 471 ETLFSVGQIIEK 482 + L ++G +E+ Sbjct: 446 DVLLAIGAQLER 457 >gi|302185691|ref|ZP_07262364.1| amidase [Pseudomonas syringae pv. syringae 642] Length = 475 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 141/485 (29%), Positives = 216/485 (44%), Gaps = 38/485 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R +++ + L + + AIE NS +NA+ +V A+ A A + G Sbjct: 12 VIEAATLVREGELTPIHLTELCLAAIETHNSTLNAFGDVYAEAALEQAAGMTAELQRGQV 71 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 72 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALESVPVQDAPIIRRLKNAGAIILGKTATTEF 131 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 132 GWTGASTSRVFGNGRNPWDP-----SLTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 186 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D Sbjct: 187 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQA-- 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LP PD E L + Q + K R+ + D ++ DA + SLP T Sbjct: 244 LPAPD-ESFLARCDQPL-----KPLRIGFCPTLFDTPIDPQVAAAVDAAVGNIARSLPVT 297 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L + A + G+ YG + K L+ + GF + +K Sbjct: 298 VSTLKPDWQDPLATFETLWVAGRGIAYGKALAQK--LDQLDP----GFAELIKR------ 345 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEEN 421 S++ S YL+A + R F+ D++L PT P F P+G Sbjct: 346 ---SAQYSLSDYLQALQQRAAFANQVHALFDD-YDLLLMPTLPILPFAADDVAPVGYAGQ 401 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + G++ FT N+ G PA ++P +P+GLQ++G F + + +E Sbjct: 402 D-GAVPWARWTPFTYPFNITGNPAANLPCGRSSAGLPIGLQVVGPRFADARVLQFCAAVE 460 Query: 482 KEAGY 486 A + Sbjct: 461 AIAPW 465 >gi|299132364|ref|ZP_07025559.1| Amidase [Afipia sp. 1NLS2] gi|298592501|gb|EFI52701.1| Amidase [Afipia sp. 1NLS2] Length = 472 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 126/483 (26%), Positives = 224/483 (46%), Gaps = 32/483 (6%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++ + ++ + + + +K+IS VE+ ++A + + S +NA+ ++ + A AAA ++ Sbjct: 3 AKFDALSAVKLKRLIAAKEISPVEVTLRALEAAQETQSTLNAFSTLMPEAALAAAMAAED 62 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L GIP+ +KD A G+ + S + ++ ++L GA+++G Sbjct: 63 AVMRGQPLGLLHGIPVSVKDLIAVGGVTYASGSKTMANNIAAADAPAVERLRQAGAIIIG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF + G +PW + TPGGSS G++A++A + +GTD Sbjct: 123 KTTTSEFGCKPVGDNLLTGITRNPW-----NESKTPGGSSAGAAASIAAGITPFGLGTDG 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P SF+G GIK +GR + +S P+L G I R+++D+A+L AIAGYD Sbjct: 178 GGSIRIPCSFSGLAGIKGHFGRVP-IWPVSATPTLAHVGPIARSMQDAALLFSAIAGYDA 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVPD A S++GM + + +P + + ++ + L+D G ++ Sbjct: 237 RDPFSVAGPVPDVLGAAQASVKGMRIAYSPTFGYAKPTPKVLEVIERAVRTLEDLGCEVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +I P + + + Y GV LR + EN R + Sbjct: 297 QIDRPFAKDPIDLW----------TAEFYAGVGIRLR-------DFVENKRDM--LDPAV 337 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 ++ G R Y + R ++ F + D I++P P ++ +G Sbjct: 338 ADVLEGALSQDMRSYYTKVFERYAFRDEVRTLF-----ETYDAIVSPVVPVTSLDVGVNI 392 Query: 421 NNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S ++ + V +T N+ G A SV A + MP+GLQ++G+ E + +G Sbjct: 393 PAHLSDRNLVSWVYYTYPFNLTGQAAGSVCAGIAADGMPVGLQIVGRALGEYDVVRLGAA 452 Query: 480 IEK 482 E+ Sbjct: 453 YER 455 >gi|312884332|ref|ZP_07744041.1| Amidase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368105|gb|EFP95648.1| Amidase [Vibrio caribbenthicus ATCC BAA-2122] Length = 511 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 146/504 (28%), Positives = 224/504 (44%), Gaps = 51/504 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +SE + +++K+I++ +LV Y++ I+N N + I V + +A+E DK N D Sbjct: 27 LSEIHNAIKNKEITSEQLVKFYLKRIKNYNKENINAIITVNENVLKSAKEWDKSG-NKDL 85 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP +KD + A S L Y++TV + L NGA++LG+ NM E A Sbjct: 86 L-LGGIPFLVKDNYNVVRQPNTAGSTALKKNVADYDATVVKLLKQNGAIVLGRTNMSELA 144 Query: 129 M--GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 G +S G ++P + P GSS GS+AAVA ++GTDT GSIR Sbjct: 145 ASYGRFGYSSLAGQTLNPLNP-----QRDPSGSSSGSAAAVAAHFAPFALGTDTTGSIRG 199 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS TG VG +P+ G SR+G++ + + D G + R+V D A+++ IA DE D V Sbjct: 200 PASVTGLVGYRPSMGVTSRVGVVPLSLTFDTTGPLVRSVEDLALIMDVIAKKDEADQASV 259 Query: 247 ----NLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + P P + +L S++G +G Y + +D Q +S LK GA I+E Sbjct: 260 FYYQHQPSPKFSDSLQSASLKGKRLGFITNY--SGANSEVDTILDQAMSSLKQQGADIIE 317 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK- 360 + LP S A SS + G + ++E + N I VK Sbjct: 318 VQLPSDM-------AFSGASISSFII---GSEFKSQLEA----HLSSNNAPINLADVVKA 363 Query: 361 --------HRIMIGTYVLSSRCYDSHYLRARKIRTLIKR---DFTEAF-----EQGVDVI 404 H I ++ L K +L+ + DF E + +D Sbjct: 364 LKADTQNPHPINPKRLAALENAISNNDLSGSKYISLLNQVMPDFREKLNAIRMQHRLDGF 423 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQ 462 + T P A PL N D+ +M G P +S+PA L E +P+ L Sbjct: 424 VFATRPCPAAPLPGYPNTGYQCQS--KDLLEAGYIASMLGYPEVSIPAGLTESNIPVSLS 481 Query: 463 LIGQPFREETLFSVGQIIEKEAGY 486 +G + + +G EK AG+ Sbjct: 482 FLGGFGEDVEMVKLGYAFEKIAGF 505 >gi|320162922|gb|EFW39821.1| amidase [Capsaspora owczarzaki ATCC 30864] Length = 602 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 138/503 (27%), Positives = 219/503 (43%), Gaps = 47/503 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE---SD 60 +F V + SK++S V++V + AI SN+ V+A + + E+ S+ Sbjct: 114 FHFDTVHDFHKAYVSKELSPVDVVTALNAAIAASNALERPLRAVIATQPDSVLEQARASE 173 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R +G L+G+P+ IKD G T + +L G + L GA+++ Sbjct: 174 QRYRDGTPLSPLDGVPVAIKDELDVIGYPTTVGTRVL-GKVATTDCASAASLRAAGAIII 232 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NM E +G++ +G +P+ T SS GS +AVA LC +IG D Sbjct: 233 GKTNMHEIGIGTTGSNVNHGVCRNPYNLGHHTGG-----SSSGSGSAVAAGLCPIAIGAD 287 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS G VG+K T+ R S G PS+ G I TVRD A+ AG D Sbjct: 288 GGGSIRIPASLCGVVGLKATWSRISEFGAFPLCPSVGHTGPIASTVRDVALAYALTAGPD 347 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D P + G+ +G+ + D+ + K+ + + GA I Sbjct: 348 KRDEYSTIQPSIHLSNFESDDLTGVKIGV-YDRMFDHADEQVVKSCRAMLDVFVSKGATI 406 Query: 300 VEISLPHTQYALPAYYIISPAEASS----NLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 I++P + ++ I +E + N+A D R L TR+ Sbjct: 407 RPIAIPELEEIKVSHLITILSEMIASMRGNIADSDWHRLSL------------TTRA--- 451 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-- 413 + +G ++ ++ R R IRTL +R F E G+ VI P+T +A Sbjct: 452 ------PLYLGEMFTATDYQNAQRYRTRAIRTL-RRLFEEG---GITVIAVPSTAIAAPR 501 Query: 414 ---FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 L +E N+ G I +V N+ G+P IS P+ +P+G QL+G+ + E Sbjct: 502 INEHALATDELNAQQTGRIMRT--SVLANLTGVPGISFPSGYTADGLPIGFQLMGKWYHE 559 Query: 471 ETLFSVGQIIEKEAGYFRPHKWW 493 TL + +I E P ++ Sbjct: 560 HTLLQMARIGEASVTRREPALYY 582 >gi|171059704|ref|YP_001792053.1| amidase [Leptothrix cholodnii SP-6] gi|170777149|gb|ACB35288.1| amidohydrolase, AtzE family [Leptothrix cholodnii SP-6] Length = 467 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 137/473 (28%), Positives = 211/473 (44%), Gaps = 41/473 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R SA V+ + I + Q+NA+ V+A +A A + DK + L G+P Sbjct: 16 VRDGSTSARAGVEQCLARIAATEPQVNAFTSVLADRALRRAGQIDKHTRRSEL-SLAGVP 74 Query: 76 IGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +K+ F G+ T A S I D ++ + ++L GA+++G LNMDE+A G + E Sbjct: 75 FAVKNLFDVAGLPTLAGSKIERDTLPAARDALLVRRLEAAGAILVGALNMDEYAYGFTTE 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P D T GSSGG AA+A ++G+DT GSIR PAS GT Sbjct: 135 NTHYGTTRNP---HDLTRISG--GSSGGCGAAIAAGQVPITLGSDTNGSIRVPASLCGTF 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPT+GR R G F SLD G RTV D A+ A+ G D C Sbjct: 190 GLKPTFGRLPRTGSYPFVASLDHLGPFARTVADLALTYDAMQGPSHDDPGCARRAPERVT 249 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L +G+ +G+ + + P + L A I P + A A Sbjct: 250 GELGLGAEGLRIGVLGGWFRNMAMPEA----LAAVDALAQALGTTRLIEWPEVERARAAA 305 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 ++IS +E ++ L D LR +D F + R + G + ++ Sbjct: 306 FLISNSEGAT-LHLND-----LRRRAQD------------FEPLSRDRFLAGALLPAAWV 347 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSM-GHIYN 431 +A+++R R +FE VDV+L P TP A +G E E + + Sbjct: 348 Q-----QAQRVRHWFARRVARSFET-VDVVLAPATPCVAPVIGTEWLEIDGKRLPARPSL 401 Query: 432 DVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIE 481 + T V+ GLP ++VP +P+G+Q+I P+RE+ V +E Sbjct: 402 GLLTQPVSCIGLPVVTVPVWGMNPTLPHLPIGVQVIAAPWREDLALRVAAHLE 454 >gi|269837251|ref|YP_003319479.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269786514|gb|ACZ38657.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 514 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 133/499 (26%), Positives = 236/499 (47%), Gaps = 45/499 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ ++ R+R +++S VE+VD++I+ IE N +NA++ V +AR A+E+++ Sbjct: 11 ELAYIPAADLAARIRRRELSPVEVVDAFIRRIEERNPSLNAFVYVAFDEARERAQEAERA 70 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHI--LDGFRPHYESTVTQKLWDNGAVML 119 +++G + L G+P IKD F I L F +++ GA++L Sbjct: 71 VMSGAELGPLHGVPTAIKDLFDYHPGWKSTFGGIRALKDFVVDAHCVFAERIKRAGAIIL 130 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N + + +GP +P+ + + G S G ++A G L A GTD Sbjct: 131 GKTNSPIMGFRGTCDNYLFGPTRNPF----DLSRNSGGSSGGSAAAVADGLLPLAE-GTD 185 Query: 180 TGGSIRQPASFTGTVGIKPTYGRC---SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GGSIR PAS+ G G KP++GR +R S G +TRTV D+A+ L A+A Sbjct: 186 GGGSIRIPASWCGVYGYKPSFGRVPYVNRPNAFSGTDPFLFEGPLTRTVEDAALALSALA 245 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 GYD D ++ V D+ AL +S++G + ++ + + P + + + +AG Sbjct: 246 GYDPRDPFSLDEQV-DFMSALRRSVKGWKIAYSPDFDVYPVDPEVRRVVDEAAMAFTEAG 304 Query: 297 AKIVEISLPHT--QYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 A++ E+ + T Q L + +I P N+A +G++ G G D+L + + Sbjct: 305 AQVEEVCVGITRDQRELSDLWCRLIIPL----NVAGIEGLKAG----GIDLLGEHRDDLP 356 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + ++ R R +++RT I D + D+++TPT + Sbjct: 357 PEYLRWIEE---------GYRMTALDVQRDQQMRTEIY-DAIQGVLNEYDLLITPTL--A 404 Query: 413 AFPL---------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 P+ G E N + + T VN G PA S+PA + K+P+G+Q+ Sbjct: 405 CLPVENADDGNTVGPSEINGVPVDPLIGWCMTYFVNFTGHPAASIPAGMAHGKLPVGMQI 464 Query: 464 IGQPFREETLFSVGQIIEK 482 IG+ + + + + + E+ Sbjct: 465 IGRRYADADVLTASAVFER 483 >gi|313679128|ref|YP_004056867.1| amidase [Oceanithermus profundus DSM 14977] gi|313151843|gb|ADR35694.1| Amidase [Oceanithermus profundus DSM 14977] Length = 441 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 128/478 (26%), Positives = 208/478 (43%), Gaps = 63/478 (13%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVA----------QKARAAAEESDKRIINGDAR-D 70 +A +LV Y + + + + +E + ++A AAA +S +R G Sbjct: 3 TAADLVRDYARGVRDPVRETERVLERLEPGPAVAARTERRALAAAHKSAERYAAGRPLGP 62 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES--TVTQKLWDNGAVMLGKLNMDEFA 128 ++G+P+ +KD G T A S +L RP S + L GAV++GK ++E A Sbjct: 63 VDGVPVLVKDLLDVTGTVTAAGSAVLARLRPPAASDAPAVRNLQRAGAVVVGKSQLNELA 122 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 ++G +P +++ + PGGSS GS+ AVA L ++GTDTGGS+R PA Sbjct: 123 FSGLGLNPHFG---TPQNALNP--DWVPGGSSSGSAVAVARGLVPLAVGTDTGGSVRIPA 177 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G VG KP++GR S G+ A SLD G + R V D+ A+AG Sbjct: 178 AFNGLVGFKPSWGRISTRGVTPLAVSLDTVGPLARRVEDAWAFFLALAG----------- 226 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + R L + + +P + L+ P + +++ ++ L+ AGA++ LP Sbjct: 227 ---EPHRPLARPSGPPRLLVPADL-LERARPEVQGAFERALARLEAAGARLERRPLPGLA 282 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 Y A AR+ G+ I E G + R++ Sbjct: 283 EVYDLYRRYGALAAHEAYARWRGL----------IAE---------HGAAMDPRVVRRVL 323 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 ++ R H+++ R+ R F +G D ++ PT P PL E S Sbjct: 324 AVAERP-SVHHVQLRRERARRVPAFWAGL-RGTDALVLPTAPVPP-PLLAEVEASEEAFF 380 Query: 429 IYND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ND +T+ N PA+S+P A LGL L P R+ LF++ + +E + Sbjct: 381 RANDRVLAYTMLFNFYAGPAVSLPLAPG-----LGLMLAAAPGRDAALFALARWVEAQ 433 >gi|298717184|ref|YP_003729826.1| amidase [Pantoea vagans C9-1] gi|298361373|gb|ADI78154.1| amidase [Pantoea vagans C9-1] Length = 443 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 37/356 (10%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 ++ +L+S D +S +QA +N Q + V Q+ A+ ++ R A Sbjct: 6 QASQQLQSGDALPEAFTESALQAAQNPEQQGSL---VFTQRYAASGSAANARWQAKQALS 62 Query: 71 -LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 ++G+P+ IKD F +G T A S +L D ++V KL GA ++GK M EFA Sbjct: 63 AIDGLPVSIKDLFDVQGEVTTAGSRLLADAPVAVANASVVDKLLLAGAAIVGKTTMTEFA 122 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +YG ++PW+ + PGGSS G++ AVA +C ++GTDTGGS+R PA Sbjct: 123 FSGLGINPHYGTPVNPWQR---EQQRIPGGSSSGAAVAVAEGMCLGAVGTDTGGSVRIPA 179 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G KPT R ++ G + + SLD G+I VR S LL +I D ++L Sbjct: 180 ALCGLAGFKPTAERINQRGTLPLSTSLDSIGVIADDVR-SCWLLDSIIADRPLDLQLLDL 238 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + +P+ LD L + + WQ I+ LK AGA +++++LP Sbjct: 239 -------------RNARFAVPQTRVLDGLDQHVAQAWQHAITLLKQAGATVIDVTLPELD 285 Query: 309 --YALPAYYIISPAEA--------SSNLARYDG-----VRYGLRVEGKDILEMYEN 349 A+ A I+ EA + YD ++ G + G+D +E+Y+ Sbjct: 286 ELNAMNARGGITAYEAWQWHKKTVQAQPEAYDPQVLARIQRGSHLTGQDAIELYQQ 341 >gi|167566878|ref|ZP_02359794.1| indole acetimide hydrolase [Burkholderia oklahomensis EO147] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 227/485 (46%), Gaps = 51/485 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++++ + R++ VE + + IE ++A V + AR AA D +I +G Sbjct: 17 IADAVNSGRTRAARHVEAALARLALIE----PLDAMTHVAPEIARRAAAHVDAQIASGRK 72 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P IKD T + T A S L GF +T Q+L D GAV LGK NM E A Sbjct: 73 LPLAGVPFVIKDNLFTADMPTHAASPALLGFNATRNATTVQQLLDAGAVPLGKANMHELA 132 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G ++ ++G V +P GGSSGG+++AVA + +GTDTGGS+R PA Sbjct: 133 FGITSANGHFGAVRNPHDPARIA-----GGSSGGTASAVAAGI-PFGLGTDTGGSVRIPA 186 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV----RDSAILLKAIAGYDECDAT 244 +F G G++PT R S G+++ +P+ D G I + A+L + DAT Sbjct: 187 AFCGVAGLRPTPRRYSTEGVLALSPTRDTVGTIAHGIDDLLLLDAVLTR--------DAT 238 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 P P ++ G+ +G+P D L P + + ++ ++ L AGA+++ + Sbjct: 239 E---PAP-------LALAGLKIGVPDAPYFDGLDPAVAELTERALAALTGAGARLIPL-- 286 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-LEMYENTRSIGFGQEVKHRI 363 A A Y A + +A ++ + Y R + + L E +G +V+H Sbjct: 287 -----AARALYETDDAFGFA-IAGFEALAYWRRFSAEQLGLPFAEFVARLG-SDDVRH-- 337 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN 422 I ++ + Y A + I R + +AF + GVD I+ PT A + ++ Sbjct: 338 -IFRMLIDAPPSSDAYAAALGVLQDIVRWYDQAFHRTGVDCIVLPTAQCEAPRVADSGHD 396 Query: 423 --SGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVG 477 + ++ V T + G+P++S+PA L + MP+GL L G + L ++ Sbjct: 397 LPPDAAHALFARVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIA 456 Query: 478 QIIEK 482 + +E+ Sbjct: 457 REVER 461 >gi|253576910|ref|ZP_04854235.1| amidase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843777|gb|EES71800.1| amidase [Paenibacillus sp. oral taxon 786 str. D14] Length = 637 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 151/494 (30%), Positives = 229/494 (46%), Gaps = 50/494 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIIN 65 +SE + + +++ +LV Y+ I + Q + A + + A +R Sbjct: 162 ISELQLAMEQGKVTSKQLVQMYLDRIVKYDDQGISLQAVLSINPDALNIAEALDQERAEK 221 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L GIPI +KD F T + T A L P ++ L + GA++LGK N+ Sbjct: 222 GPRGPLHGIPILVKDNFDTADMPTTAGCLCLKDSIPPQDADQIANLKEAGAIILGKTNLH 281 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G + +S G +P+ + D + PGGSSGG+ AA+A L A +GTDTGGSIR Sbjct: 282 EFAFGITTSSSLGGQTKNPY----APDHY-PGGSSGGTGAAIAANLAVAGLGTDTGGSIR 336 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-AT 244 P+SF VGI+PT G SR GII A + D G I RTV D+AILL A GYD D AT Sbjct: 337 IPSSFNSLVGIRPTIGLSSRDGIIPLALTQDVGGPIARTVEDAAILLDATVGYDPDDVAT 396 Query: 245 CVNL-PVP-DYERALDQS-IQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGAKI 299 ++ VP Y LD + ++G +G+ E L+ + + + L+ GA + Sbjct: 397 SYSVGRVPTSYTDFLDANGLKGTRIGVATELFLESNDQEKAVFEVVSNAVKELEALGATV 456 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARY-----DGVRYGLRVEGKDIL--EMYENTRS 352 V I +P+ + + Y +S E L Y D Y E I+ E Y+ T Sbjct: 457 VNIKIPNLEEIM-KYPSLSGYEFKFQLNDYLEELGDNAPYHSLAE---IIASEEYDKT-- 510 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD--FTEAFEQGVDVILTPTT- 409 QE + L ++ Y L+ RT + RD + +D I+ PT+ Sbjct: 511 ----QEQSMKAREARESLDTQEYKDIVLK----RTSLTRDSLLKVMADNKLDAIVYPTST 562 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P + G+ N+ + +G PAI+VPA + +P+G++ +G+ F Sbjct: 563 QPPALIGEGQSSGNNNRLSP-----------FSGFPAITVPAGFTKDGLPVGIEFLGRAF 611 Query: 469 REETLFSVGQIIEK 482 E TL + E+ Sbjct: 612 DEGTLIKLAYSYEQ 625 >gi|307545537|ref|YP_003898016.1| amidase [Halomonas elongata DSM 2581] gi|307217561|emb|CBV42831.1| amidase [Halomonas elongata DSM 2581] Length = 465 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 129/487 (26%), Positives = 215/487 (44%), Gaps = 44/487 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ M ++ D R K +S +++ ++ ++ I+ +NA AA S Sbjct: 1 MTALHLMTATQLLDAYRQKRLSPLDVAEALVRHIDRWEPHLNALYGYHPAAFLEAARASS 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G+ R L+G+PI +K+ AT+G + + ++ +L ++ A++L Sbjct: 61 DRWVRGEPRGPLDGVPITLKELIATRGTPIPNGTGLGQQAPAVEDAPPAARLAEDDALLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K +F M SS +S++G +PWR +D + G+ ++A +GTD Sbjct: 121 AKTTCPDFGMLSSGRSSFHGTTRNPWR-LDCNTGGSSSGAGAAAAAGYGPL----HVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKAIAG 237 GGS+R PA++ G VG KPT GR I P AG +TR+V D+A+++ A+A Sbjct: 176 IGGSVRLPAAWCGVVGFKPTQGR------IPIDPYYVGRCAGPMTRSVDDAALMMTALAR 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D DAT + D+ L + G+ +G+ E G+ L D A Sbjct: 230 TDRRDATRLPPESIDWTD-LGLDVSGLRIGVMLEAGC-------------GLP-LDDEIA 274 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + VE + H + A ++P L DG+ R LE Sbjct: 275 RAVEGAAVHLEAAGATLVPLAPVLTREML---DGLDRFWRTRQWSALE--------ALTL 323 Query: 358 EVKHRIMIGTYVLSS---RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 E + R++ + R +R + +TL R TEA VD +++PTTP AF Sbjct: 324 EQRERVLPAILAWADDGGRISGVEAVRGFE-QTLAMRRATEAVFDDVDAVISPTTPNVAF 382 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P + + +TV NM PA+S+ A + MPLG+QLIG F + + Sbjct: 383 PADWVSPTNDPQQPFEHIAYTVPWNMGEQPALSLNAGFSREGMPLGVQLIGPRFADHRVL 442 Query: 475 SVGQIIE 481 + + +E Sbjct: 443 KLAKTLE 449 >gi|167770174|ref|ZP_02442227.1| hypothetical protein ANACOL_01517 [Anaerotruncus colihominis DSM 17241] gi|167667496|gb|EDS11626.1| hypothetical protein ANACOL_01517 [Anaerotruncus colihominis DSM 17241] Length = 501 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 139/487 (28%), Positives = 232/487 (47%), Gaps = 43/487 (8%) Query: 21 ISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGDARDLEGIPI 76 +S LV+ Y I+A + +NA I +V A A+ D R+ +G L GIPI Sbjct: 31 LSCRRLVEGYLARIEAYDKKGPNLNAII-LVNPHALEEADRLDARMEQDGLTGPLHGIPI 89 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD T + T A S L+ F H ++ + +K+ + GAV+L K N+ EFA+ +S Sbjct: 90 LLKDNVETYDMPTTAGSLSLENFETHKDAWIVKKMREAGAVILAKTNLHEFAVWGETVSS 149 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 G +P+ D T TPGGSSGG+ A +A A IGTDT SIR P+S VGI Sbjct: 150 ILGQTYNPY---DHTR--TPGGSSGGTGAGLAANFGVAGIGTDTINSIRSPSSANSLVGI 204 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA---TCVNLPVPDY 253 +PT G SR GI+ ++ + D AG + RTV D+A +L IAG D D +C+ P Y Sbjct: 205 RPTIGLVSRDGIVPYSLTQDTAGPLARTVADAARVLDVIAGCDPKDPVTESCIGRVPPSY 264 Query: 254 ERAL-DQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 +L D ++G +G+ + + + ++ + + +++ GA++V+I + Sbjct: 265 LDSLNDDGLRGRRIGVLRSFFGTKDIHRDVNAAMEHCLDIMRENGAEVVDIE----ETID 320 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI--MIGTYV 369 Y + + + +L + G + + + + S + +K + +G Y Sbjct: 321 SGYLVKNVSVHIHDLKTHLGQYLAAFGDAAPVHSLADVLASGKYHPGLKSNLDEAMG-YD 379 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGH 428 + + Y+ R R+ L K+ + VD I+ P +GK +E +G +G Sbjct: 380 VGTPVYNE---RLRQRAELQKQILAIMDKYQVDAIVYPHQKQLVCKVGKSQEERNGVIG- 435 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIEK 482 +++G PAI VPA E +P+G++++G+PF E L + E+ Sbjct: 436 ----------SVSGYPAIVVPAGFSEPSDDAPIGVPIGMEMLGRPFTEPALIEIAYGFEQ 485 Query: 483 EAGYFRP 489 + RP Sbjct: 486 HSHLRRP 492 >gi|108763549|ref|YP_631756.1| amidase [Myxococcus xanthus DK 1622] gi|108467429|gb|ABF92614.1| amidase [Myxococcus xanthus DK 1622] Length = 548 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 150/518 (28%), Positives = 236/518 (45%), Gaps = 58/518 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ----MNAYIEVVAQKARAAAEE 58 EL V + + +++ +++A L + Y+ I + +S+ + + IE+ AA Sbjct: 36 ELAEATVVDLQAAMKAGELTAQGLAERYLARIADWDSRGRLPLRSVIELNPDALATAAAL 95 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 +R G L GIP+ +KD AT + T A S L G RP ++ + ++L GAV Sbjct: 96 DQERREKGPRGPLHGIPVLLKDNIATADQMQTTAGSLALVGARPSRDAFIVERLRAAGAV 155 Query: 118 MLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +LGK N+ E+A S+ S + R+ + D+ TP GSS G+ AA A CA S+ Sbjct: 156 ILGKTNLSEWANFRSTRSASGWSARGGQTRNPYALDR-TPSGSSSGAGAATAANFCAVSV 214 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+T GSI PA+ + VG+KPT G SR GII + S D AG +TRTV D+A LL +A Sbjct: 215 GTETDGSIVSPAAASALVGLKPTVGLVSRSGIIPISHSQDTAGPMTRTVADAAALLSVLA 274 Query: 237 GYDECDATC---VNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 G D D DY R LD ++G +G+P+E Y P D ++ ++ + Sbjct: 275 GVDPSDGATGASRGKAHADYTRFLDVDGLKGARIGVPRERFFGY-HPATDALVEEALALM 333 Query: 293 KDAGAKIV---------EISLPHTQYALPAY------YIISPAEASSNLARYDGVRYGLR 337 K GA +V ++ P + L + Y+ + E ++ + +RY Sbjct: 334 KSRGAILVDPAPIPAVAQVDAPELEVLLYEFKAGLEAYLATLEEGTAPRTLAELIRYN-- 391 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 E + + FGQE+ H D YL+A + + R Sbjct: 392 -------EAHAPSELPYFGQELFHMAQA-----KGPLTDKAYLKALQACRRLSR------ 433 Query: 398 EQGVDVILTP------TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 QG+D ++ PT A P+G + +G H T A ++G +I+VPA Sbjct: 434 AQGLDAVMKKHQLDALVAPTQA-PVGLIDPINGD--HWLGSSSTPAA-VSGYASITVPAG 489 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +P+GL IG + E L + E + + RP Sbjct: 490 FV-YGLPVGLSFIGGAWSEPVLLKLAHAYEHASKHRRP 526 >gi|260813967|ref|XP_002601687.1| hypothetical protein BRAFLDRAFT_94564 [Branchiostoma floridae] gi|229286989|gb|EEN57699.1| hypothetical protein BRAFLDRAFT_94564 [Branchiostoma floridae] Length = 519 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 118/424 (27%), Positives = 193/424 (45%), Gaps = 44/424 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G P+ IKD A G+ S +L+G+ P Y++T+ ++ D G V+ GK ++ Sbjct: 122 LQGKPVAIKDNVAVAGVPMMDGSRVLEGYIPEYDATIITRILDAGGVIRGKAVCEDMCKS 181 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ T+ GPV++ MD S A L +IG D GGSIR PA++ Sbjct: 182 PSSFTAATGPVVN--AHMDGRSSGGSSSGSAALLALGEVDL---AIGGDQGGSIRIPAAW 236 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC--DATCVNL 248 +G VG+KPTYG G +S +LD G + RTV+D A++L+ ++GYD N+ Sbjct: 237 SGVVGLKPTYGLVPYTGCVSVETTLDHVGPMARTVQDIAVMLEVLSGYDGGLDPRQAPNV 296 Query: 249 PVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +Y L + G+ VG+ KE + L +D ++ L AGA + E+S+P Sbjct: 297 SGQNYSSQLTGDVSGIRVGLLKEGFGLVTSEADVDDMVREAAHKLTSAGAVVEEVSVPMH 356 Query: 308 QYAL----PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 + L +Y S EA LAR G + D +K + Sbjct: 357 RDGLGVGWKGFYPTSMLEA---LAR------GFKSRANDT------------SHTLKQLM 395 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G Y+ + +Y + + + + + A Q DV++ PT P F K N Sbjct: 396 LFGQYMRETYG-GRYYAKGQNLSRALTHAYNNAL-QKYDVLVLPTVP---FKATKIPNQD 450 Query: 424 GSMGHIYNDVFTVAV-----NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S+ F+V N+ G PA+S+ A + +P+G+ ++G+ F + T+ V Sbjct: 451 VSIKEFCQTGFSVVANTCPFNLTGHPALSINAGFSQ-GLPVGMMIVGRHFDDVTVLRVAH 509 Query: 479 IIEK 482 E+ Sbjct: 510 AYER 513 >gi|296103003|ref|YP_003613149.1| putative oxalurate amidohydrolase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057462|gb|ADF62200.1| putative oxalurate amidohydrolase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 459 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 136/489 (27%), Positives = 216/489 (44%), Gaps = 57/489 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++S + L + ++SA E+ ++ I N Q+NA+ V +AR AE + + Sbjct: 1 MSISAIQQALSAGELSAREIARQTLEDIARINPQINAWTAVT--EARMLAEAENIDTLRR 58 Query: 67 DAR---DLEGIPIGIKDCFATKGIHTQACSHILDGFR-PHYESTVTQKLWDNGAVMLGKL 122 + R L G+P +K+ F G T A + + +S ++L G ++ G + Sbjct: 59 EKRPLPPLAGVPYAVKNLFDVAGHTTLAGAELFSKRSAASADSFAVRQLRSAGGLLSGMV 118 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NMD +A G + E S+YG +P + + GGS+ +A + F S+GTDT G Sbjct: 119 NMDAYAYGFTTENSHYGATRNP-HDLTRIAGGSSGGSAAAVAAGLVHF----SLGTDTNG 173 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PAS G G+KPT+GR SR G F SLD G R V D A + A+ G D D Sbjct: 174 SIRVPASLCGIYGLKPTFGRLSRSGSHPFVASLDHIGPFARRVCDLASVYDALQGRDTSD 233 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LD+ + G+ + Y + + + + L E+ Sbjct: 234 PFQAESSREQTRPLLDRGLDGLRCAVLGGYFSTWCNDDAREAVARAARALDVQE----EL 289 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVK 360 P + A +IIS +E G +Y LR E + F + Sbjct: 290 QFPEAALSRSAAFIISASEG--------GNQYLPSLRREPER------------FEPHSR 329 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 R++ G + S + Y++A++ R ++ FEQ DV++ P TP SA +G++ Sbjct: 330 ERLLAGAMIPS-----AWYIQAQRFRAHARQACKALFEQA-DVLIAPATPRSATTIGEQI 383 Query: 420 -ENNS------GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E N SMG + T ++ GLP +VP + P+GLQLI PF E+ Sbjct: 384 MEINGEPLPVRASMG-----MLTQPISFLGLPVTTVPLRTAQGA-PIGLQLIAAPFNEQA 437 Query: 473 LFSVGQIIE 481 V +++E Sbjct: 438 CLRVARVLE 446 >gi|228985194|ref|ZP_04145359.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774489|gb|EEM22890.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 493 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 143/493 (29%), Positives = 220/493 (44%), Gaps = 60/493 (12%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + +++ ELV Y+ I + ++N+ +E+ A +R G L Sbjct: 24 MEAGQLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERKTKGVRGPLH 83 Query: 73 GIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK NM E A Sbjct: 84 GIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKTNMTELANAM 143 Query: 132 SNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S E ++ G I+P+ + + D GGSS GS+ AV S+GT+T GSI Sbjct: 144 SFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVTANFTVVSVGTETDGSILS 201 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VGIKPT G SR GII F S D AG RTV D+AILL + G DE D Sbjct: 202 PAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGGLTGVDERDVATR 261 Query: 247 N---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQGISWLKDAGA 297 + DY + LD + G +G+ PK+Y Y S D K +++ I L+ GA Sbjct: 262 KSEGIAEHDYTKYLDVNGLNGTKIGVYNNAPKDY---YESGEYDEKLFKETIEVLRSKGA 318 Query: 298 KIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT-- 350 +VE I++P H +++ + +S E +L Y + + V +++E EN Sbjct: 319 TVVEDINIPSFHREWS----WGVSLYELKHSLDNYLSKLPPTIPVHSISELMEFNENIAE 374 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R++ +GQ R + + YL AR D + EQG+D L Sbjct: 375 RALRYGQTKLER----RKDFPNTLRNPQYLNAR------LEDIYFSQEQGIDFALEKYNL 424 Query: 411 TS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + FP + + + AG P+I++PA E + P G+ F Sbjct: 425 DAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESRRPFGITFASTAFS 469 Query: 470 EETLFSVGQIIEK 482 E L + E+ Sbjct: 470 EGILIKLAYAFEQ 482 >gi|300715728|ref|YP_003740531.1| Amidase [Erwinia billingiae Eb661] gi|299061564|emb|CAX58678.1| Amidase [Erwinia billingiae Eb661] Length = 453 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 128/494 (25%), Positives = 216/494 (43%), Gaps = 61/494 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEES 59 M+ +++ ++ ++L ++ V+L + + A+ + A+I+V AQ AR AE S Sbjct: 1 MNSYPSLSLQQAIEQLELGTVTCVQLTEQALAAMTAREGEGSRAFIQVYAQWAREQAEAS 60 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAV 117 R G+A L+G+P+ IKD F +G T S +L D +T+ KL GAV Sbjct: 61 ALRRAAGNALSPLDGVPVSIKDLFDLQGEATTGGSTVLADAPVAESHATIVDKLLQAGAV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK NM EFA +YG +PW D + PGGSS G++ +++ + +IG Sbjct: 121 IVGKTNMTEFAYSGLGINPHYGTPANPW---DRAARRIPGGSSSGAAVSISDGMSLGAIG 177 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+R PA+F G G KPT R S G++ + SLD G + V Sbjct: 178 SDTGGSVRIPAAFCGLTGYKPTARRISMAGVLPLSASLDSVGTLAHDVL----------- 226 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMT---VGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 +CV L +R L +++ + +P+ L+ L + +++ + +K Sbjct: 227 ------SCVALDAVIADRPLSLTVKNLADAHFAVPQTGVLEGLDTQVAAAFERAVLTIKQ 280 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY-----GLRVEGKDILEMYEN 349 AGA++ I P T+ A +S AS + ++ R EG D + Sbjct: 281 AGAQVSAI--PLTEIAE-----LSAINASGGFTALESWQWHQPLIAQRAEGYDPRVVSRI 333 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 R G+ + R++ +R SH + Q D +L PT Sbjct: 334 RRGEALGEADRQRLVEQRADWQTRV--SHIV------------------QQYDALLMPTV 373 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 P A + E + + I +N A+S+P + + + P+GL + P Sbjct: 374 PFIAPRIADLEADEDAYFRINGAALRNPSVINFLDGCAVSLPCS-AKGQAPVGLMVAALP 432 Query: 468 FREETLFSVGQIIE 481 +++ L S IE Sbjct: 433 MQDDALMSWALAIE 446 >gi|307728740|ref|YP_003905964.1| Amidase [Burkholderia sp. CCGE1003] gi|307583275|gb|ADN56673.1| Amidase [Burkholderia sp. CCGE1003] Length = 488 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 135/467 (28%), Positives = 217/467 (46%), Gaps = 45/467 (9%) Query: 37 SNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHIL 96 +++ +NA+I + A +DK G L G+P+G+KD + T G+ T L Sbjct: 51 AHADLNAFIAIDEDALLDGARSADKARAAGAEAPLLGVPVGVKDSYLTAGLATSIGLERL 110 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 + P ++ + D GA++ GK N+ E + G + +G V +P + D+ T Sbjct: 111 ARYVPTEDADAVGAIKDAGALVFGKNNLVEMSYGLTGHNERFGQVKNPR----APDRVT- 165 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 GGSS GS+A+VA + AS+G DT GSIR PASF G VG KPT GR R G+ + +LD Sbjct: 166 GGSSSGSAASVAAAMVPASLGGDTVGSIRVPASFCGVVGFKPTTGRWPRSGVAPISHTLD 225 Query: 217 QAGIITRTVRDSAILLKAI-----AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 G+ R V D A+L + + A D+ +A V G + Sbjct: 226 TTGVFARNVEDCALLDQIVTREHAAESDDGEANLV----------------GARLAFAPR 269 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL--PAYYIISPAEASSNLARY 329 L+ + P ++ +++ + LKDAGA++ E+ L +L A + I E ++ + Sbjct: 270 QFLELVDPEVEDRFREVVRQLKDAGAEVFEVDLGKDFNSLIQVATWGIFAHETQGAISEF 329 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI-RTL 388 L E+YE + Q +H ++ G +S Y A + R Sbjct: 330 ----LALHKIPTTFDEIYEGLKP-QLRQAWEHIVLPGGAGATSV---QQYKAALDVSRPE 381 Query: 389 IKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEE-----NNSGSMGHIYNDVFTVAVNMAG 442 I R +AF QG IL PTTP +A +G++E + S + N T++ + G Sbjct: 382 ILRRLNQAFVNQGAIAILQPTTPCTAPLIGEQEGLRIADQEVSTLALAN--HTLSASSVG 439 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 LP IS+PA L +P+G++L + L ++ + IE+ G P Sbjct: 440 LPGISLPAGLSRAGLPIGVELDAPLASDRALLNLSRRIERILGTLPP 486 >gi|119898648|ref|YP_933861.1| amidase [Azoarcus sp. BH72] gi|119671061|emb|CAL94974.1| probable amidase [Azoarcus sp. BH72] Length = 497 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 143/510 (28%), Positives = 224/510 (43%), Gaps = 50/510 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 + A RD LR+ SA +LV + I+ N +NA + + + A AAA +D+R+ Sbjct: 8 HLTAAQAVRD-LRAGRYSAEQLVLACQARIDRFNPTLNALVTLNREGALAAARGADRRLA 66 Query: 65 NGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G A L G+P+ IKD FAT+ + T A L +RP ++TV + + GAV++GK N Sbjct: 67 QGGLAPALLGVPVSIKDAFATRDMLTTASHRPLAAYRPGADATVVARWREAGAVLMGKSN 126 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + E A + +G +PW TPGGSSGG++ AVA IG+D GS Sbjct: 127 LPELAGAPHCWSPLFGLTRNPW-----NPALTPGGSSGGAAVAVAAGFSLLDIGSDIAGS 181 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPS-----------LDQAGIITRTVRDSAILL 232 IR PA++ G G+K T R R G I P + G++ R+V D + Sbjct: 182 IRIPAAYCGIAGLKATENRIPRTGHIPHLPPEFGGPGRSVWHMLAFGVLARSVEDLQLGY 241 Query: 233 KAIAGYDECDATCVN-LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +AG D D T LP P +++ M + + ++ L P I + Q Sbjct: 242 GLLAGPDGVDCTVPPFLPEPPSLPTTARAVAPMRIALWDDFAGMPLCPRIRRGLQNMAGK 301 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L+ +G ++V + PA + + A + L G GL + G ++ R Sbjct: 302 LRASGHEVVRCA--------PADFDVGAAWHAFGL--IGGAEIGLGMPGWQ-RRLFLALR 350 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK--IRTLIKRDFTEAFEQGVDVILTPTT 409 + V R + R Y+ L R+ IR+L E F D ++ P Sbjct: 351 PLLPRDHVITRAVAAGMRFDLRRYN-QALNQREGLIRSL------ERFVGEWDAVICPVA 403 Query: 410 PTSAFP-------LGKEENNSGSMGHIYND---VFTVAVNMAGLPAISVPAALCEKKMPL 459 PT +P N G Y + T ++ G P +S+P + E +P+ Sbjct: 404 PTGPYPGEPMPPTRKPPRLNVGEATLPYLEATIAMTAPFSLTGSPVLSLPVGI-EDGLPV 462 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 G+Q+IG+ ++E L G+ +E G F P Sbjct: 463 GVQVIGKRWQEHALLETGRRLENALGGFVP 492 >gi|327393583|dbj|BAK11005.1| putative amidase protein hypothetical protein [Pantoea ananatis AJ13355] Length = 469 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 121/480 (25%), Positives = 210/480 (43%), Gaps = 53/480 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R++D+S VE++ +++ I +N +NA + VA+ A A ++ ++ G+ L G+ Sbjct: 17 IRNRDVSPVEVMQAHLDRIAATNPDVNAVV-TVAEDALKQAAAAEAAVMKGEKLGPLHGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD T G+ TQ S I G RP ++T +L G ++L K N+ EF+ ++ Sbjct: 76 PFTVKDSIDTAGVLTQRGSPIFKGRRPDEDATSVARLKKAGGILLAKTNLPEFSYWIESD 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +PW D T TPGGSSGG SAA+A + +GTD S+R PA+ TG Sbjct: 136 NLLSGRSNNPW---DLTR--TPGGSSGGESAAIAAGMSPLGLGTDLAISVRGPAAQTGIT 190 Query: 195 GIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +K T+G GI AP G + R+VRD A+ ++G D DA PV Sbjct: 191 SMKATHGSVPMTGIWPRAPRRFWHVGPMARSVRDIALAFSQLSGPDGHDAFSSAAPV--- 247 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLS--------PTIDKTWQQGISWLKDAGAKIVEISLP 305 G+ + R+ +++ P ++ + LK G + + +P Sbjct: 248 ------HSDGLPFVASRPLRIGWMTGPGFGPVDPDVNAIVKAAAEALKAPGVVVEHVGIP 301 Query: 306 HTQ--YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 + +AL + + E A G+ E+Y+ Sbjct: 302 ALEKDFALDVFNRLHVMEMKPAFAAA--------TAGRQPDEIYK--------------- 338 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-- 421 M T + S Y+ A + ++ F E F + D ++T P A G + Sbjct: 339 MAKTMLSLPDTSMSAYIDAEQAAERLRDGFAEYFSR-YDALITHVLPIPAHKHGVDRFVI 397 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + Y TV +N+ GLP +++P + +P+ +Q++G+ E + + ++E Sbjct: 398 DGQEVDATYLQGATVPLNVTGLPGVALPFGKSREGLPVNVQIVGKWHDEHVILHIASLLE 457 >gi|22124836|ref|NP_668259.1| amidase [Yersinia pestis KIM 10] gi|45440522|ref|NP_992061.1| amidase [Yersinia pestis biovar Microtus str. 91001] gi|108808743|ref|YP_652659.1| amidase [Yersinia pestis Antiqua] gi|108811000|ref|YP_646767.1| amidase [Yersinia pestis Nepal516] gi|145600156|ref|YP_001164232.1| amidase [Yersinia pestis Pestoides F] gi|149364898|ref|ZP_01886933.1| probable amidase [Yersinia pestis CA88-4125] gi|153948867|ref|YP_001402154.1| amidase [Yersinia pseudotuberculosis IP 31758] gi|162418429|ref|YP_001607789.1| amidase [Yersinia pestis Angola] gi|165926591|ref|ZP_02222423.1| amidohydrolase, AtzE family [Yersinia pestis biovar Orientalis str. F1991016] gi|165935934|ref|ZP_02224504.1| amidohydrolase, AtzE family [Yersinia pestis biovar Orientalis str. IP275] gi|166011116|ref|ZP_02232014.1| amidohydrolase, AtzE family [Yersinia pestis biovar Antiqua str. E1979001] gi|166212943|ref|ZP_02238978.1| amidohydrolase, AtzE family [Yersinia pestis biovar Antiqua str. B42003004] gi|167399664|ref|ZP_02305188.1| amidohydrolase, AtzE family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421656|ref|ZP_02313409.1| amidohydrolase, AtzE family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423349|ref|ZP_02315102.1| amidohydrolase, AtzE family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468801|ref|ZP_02333505.1| amidohydrolase, AtzE family protein [Yersinia pestis FV-1] gi|170025549|ref|YP_001722054.1| amidase [Yersinia pseudotuberculosis YPIII] gi|218930286|ref|YP_002348161.1| amidase [Yersinia pestis CO92] gi|229838873|ref|ZP_04459032.1| probable amidase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896366|ref|ZP_04511535.1| probable amidase [Yersinia pestis Pestoides A] gi|229899442|ref|ZP_04514585.1| probable amidase [Yersinia pestis biovar Orientalis str. India 195] gi|229901218|ref|ZP_04516340.1| probable amidase [Yersinia pestis Nepal516] gi|270489407|ref|ZP_06206481.1| amidohydrolase, AtzE family [Yersinia pestis KIM D27] gi|294504975|ref|YP_003569037.1| amidase [Yersinia pestis Z176003] gi|21957665|gb|AAM84510.1|AE013696_3 putative glutamyl-tRNA(gln) amidotransferase subunit A [Yersinia pestis KIM 10] gi|45435379|gb|AAS60938.1| probable amidase [Yersinia pestis biovar Microtus str. 91001] gi|108774648|gb|ABG17167.1| amidase [Yersinia pestis Nepal516] gi|108780656|gb|ABG14714.1| amidase [Yersinia pestis Antiqua] gi|115348897|emb|CAL21854.1| probable amidase [Yersinia pestis CO92] gi|145211852|gb|ABP41259.1| amidase [Yersinia pestis Pestoides F] gi|149291311|gb|EDM41385.1| probable amidase [Yersinia pestis CA88-4125] gi|152960362|gb|ABS47823.1| amidohydrolase, AtzE family [Yersinia pseudotuberculosis IP 31758] gi|162351244|gb|ABX85192.1| amidohydrolase, AtzE family [Yersinia pestis Angola] gi|165916079|gb|EDR34686.1| amidohydrolase, AtzE family [Yersinia pestis biovar Orientalis str. IP275] gi|165921519|gb|EDR38716.1| amidohydrolase, AtzE family [Yersinia pestis biovar Orientalis str. F1991016] gi|165990116|gb|EDR42417.1| amidohydrolase, AtzE family [Yersinia pestis biovar Antiqua str. E1979001] gi|166205730|gb|EDR50210.1| amidohydrolase, AtzE family [Yersinia pestis biovar Antiqua str. B42003004] gi|166960575|gb|EDR56596.1| amidohydrolase, AtzE family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052168|gb|EDR63576.1| amidohydrolase, AtzE family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057519|gb|EDR67265.1| amidohydrolase, AtzE family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752083|gb|ACA69601.1| amidohydrolase, AtzE family [Yersinia pseudotuberculosis YPIII] gi|229681147|gb|EEO77241.1| probable amidase [Yersinia pestis Nepal516] gi|229687844|gb|EEO79917.1| probable amidase [Yersinia pestis biovar Orientalis str. India 195] gi|229695239|gb|EEO85286.1| probable amidase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700642|gb|EEO88672.1| probable amidase [Yersinia pestis Pestoides A] gi|262363039|gb|ACY59760.1| amidase [Yersinia pestis D106004] gi|262366963|gb|ACY63520.1| amidase [Yersinia pestis D182038] gi|270337911|gb|EFA48688.1| amidohydrolase, AtzE family [Yersinia pestis KIM D27] gi|294355434|gb|ADE65775.1| amidase [Yersinia pestis Z176003] gi|320016451|gb|ADW00023.1| putative amidase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 465 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 125/488 (25%), Positives = 211/488 (43%), Gaps = 39/488 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + + +SE + L ++SA + + AI +N +NAY + A + + A D Sbjct: 1 MKPASSLTISEIQQALHKGELSAQAIAQQTLDAITVANPLINAYTHITADRMLSEACRLD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVM 118 G L +P +K+ F G T S D ++ L GA++ Sbjct: 61 TLRAKGQPLPALAAVPYAVKNLFDVAGETTLSGASLFCDQAPAKQDAWAISCLSRQGAML 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P ++ + GGS+ +A + F S+G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATHNP-HDLNRIAGGSSGGSAAAVAAGLVHF----SLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR P+S G G+KPT+GR SR G F SLD G + R +D A++ + G Sbjct: 176 DTNGSIRVPSSLCGIFGLKPTFGRLSRRGTHPFVASLDHIGPMARCTQDLAVVYDVMQGI 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + PV + L + QG+ + Y + D + + + A Sbjct: 236 DTQDNFQADQPVTPCQNLLTRGQQGLRSAVLGGYFHQW----SDDDAKAAVLAVAKALEA 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 E+ +P + A A +IIS +E G L + F Sbjct: 292 NAEVEMPQSDLARSAAFIISASEG-----------------GNQYLPALRKSPQ-RFEPL 333 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + + + Y++A++ R ++ FE D+++ P TP SA +G+ Sbjct: 334 SRERLLAGAMLPA-----TWYVQAQRFRHHFRQHILPLFEHW-DILIAPATPCSATLIGQ 387 Query: 419 EENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + M + T ++ GLP +SVP + +P+G+QLI P+RE+ Sbjct: 388 DTMRINDMDLPIRASMGILTQPISFLGLPVVSVPLK-TTRGLPIGIQLIAPPWREDLCLR 446 Query: 476 VGQIIEKE 483 +E++ Sbjct: 447 AAYALEQQ 454 >gi|332530444|ref|ZP_08406387.1| amidase [Hylemonella gracilis ATCC 19624] gi|332040104|gb|EGI76487.1| amidase [Hylemonella gracilis ATCC 19624] Length = 427 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 127/465 (27%), Positives = 209/465 (44%), Gaps = 62/465 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L+ ++ +E L+S+ ++A + + + + + ++ A++ V A + A A D+ Sbjct: 3 SDLHRLSATELARGLQSRSLTAEAVARACLARVAERDGELKAWVHVDADQVLAQARALDQ 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L G+PIG+KD F T + TQ S I G RP ++ + GA++LGK Sbjct: 63 GPVRGL---LHGLPIGVKDVFDTHDMPTQYGSPIYAGHRPSVDAAPVALAREAGALLLGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EF+ + SP R+ + K TPGGSS GS AAV + + G T Sbjct: 120 TATTEFSTFQA----------SPTRNPRNV-KHTPGGSSSGSCAAVGSDMVPLAFGAQTA 168 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 SI +PA++ G VG KP++G SR+G+ + + +LD G + RTV D A+ A++G Sbjct: 169 ASIIRPAAYCGVVGYKPSFGFISRVGVKALSDTLDTIGCVARTVDDVALFAAALSG---- 224 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D T +LPV Q + VG+ K + D L P + L AGAK+V+ Sbjct: 225 DKTLADLPVIQ---------QPLRVGLCKPHA-DKLLPETHAAMELAAKKLSAAGAKVVK 274 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 I+L SP A A D + + D + + + S G + Sbjct: 275 IAL-------------SPDHAQLTQAHIDIMAFETARALSDERQRHGDHISTGLRGVIDK 321 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIK-RDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + +HY A ++R + + R A DV+L P+ A PL + Sbjct: 322 GLQMNY---------THY--AAQLRYVEETRATLPALYARCDVLLAPSAAGEA-PLFEAG 369 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + ++ + GLP + +P + +P+GLQ IG Sbjct: 370 TGDPTWCRMW--------TLLGLPCVHLPFTHGPQGLPVGLQAIG 406 >gi|39934541|ref|NP_946817.1| amidase [Rhodopseudomonas palustris CGA009] gi|39648390|emb|CAE26911.1| possible glutamyl-tRNA (Gln) amidotransferase subunit A [Rhodopseudomonas palustris CGA009] Length = 485 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 144/495 (29%), Positives = 228/495 (46%), Gaps = 53/495 (10%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 ++M SE+ + ++ I+A+ ++ + I ++ +NA+ +VVA++ARA A E D I Sbjct: 26 DWMTASETAAAVANRTITALAATEAALARIAKADVTLNAFTDVVAERARARAREIDSAIA 85 Query: 65 NGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKL 122 G++ L G+P +K+ F G+ T+A S I P ++ + ++L G V++G L Sbjct: 86 RGESVGPLAGVPFAVKNLFDVAGLATRAGSKINRDRSPAAGDAPLIERLEAAGGVLIGAL 145 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NM E+A + E + GP +P T + G + + V ++G+DT G Sbjct: 146 NMGEYAYDFTGENIHDGPSRNPHDPTRMTGGSSGGSGAAVAGGEV-----PLALGSDTNG 200 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P+S G G+KPTYGR R G F S D G + R+ D A+ A+ G D+ D Sbjct: 201 SIRVPSSLCGIFGLKPTYGRLPRTGSFPFVASFDHLGPLARSAADLALAYDAMQGPDDGD 260 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 A C L + I G+ + Y L P ++ + + A + Sbjct: 261 AACTARAPEPVSGLLAEGIDGLRIAKASGYFETNLFPEA----REAVDRVVKALGITRSV 316 Query: 303 SLPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 LP A A Y+IS E AS +L R LR + D F V+ Sbjct: 317 ELPEAARARAAAYVISTTEGASLHLDR-------LRRQPND------------FDPAVRD 357 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 R++ G V +S RA+K R + E FEQ VDVI+ P TP A LG+ Sbjct: 358 RLLAGAMVPASLVD-----RAQKFRRWYRARVLELFEQ-VDVIIAPATPCVAPKLGQVTF 411 Query: 419 -----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 E ++G + T ++ GLP ++ P L + +P+G+Q+I P+RE+ Sbjct: 412 TLDGVELPVRANVG-----IHTQPISFIGLPVVAAPIPL--EPLPIGVQIIAAPWREDIA 464 Query: 474 FSVGQIIEKEAGYFR 488 V +E+ AG R Sbjct: 465 LRVAAALER-AGVAR 478 >gi|291300759|ref|YP_003512037.1| amidase [Stackebrandtia nassauensis DSM 44728] gi|290569979|gb|ADD42944.1| Amidase [Stackebrandtia nassauensis DSM 44728] Length = 459 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 210/492 (42%), Gaps = 52/492 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + +++E+ LR ++V LV+ I+A + Y+ A AA +D Sbjct: 1 MDNGRYGSLTETARALREGRTTSVALVERAIEAARTHGELLGTYVTRFDDAALEAARRAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVM 118 + + G R L GIP+G+KD AT T A S + P ++ V ++ G V+ Sbjct: 61 RELAAGRDRGPLHGIPLGVKDLIATSEAPTTAQSRVRAAAVEP--DAAVVARIRAGGGVI 118 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK EF G + + + +PW TD++ G SSG ++ AG AA IG+ Sbjct: 119 CGKTTTMEFGCGVPDLSGPFPVPRNPW----DTDRWAGGSSSGSANGVAAGCF-AAGIGS 173 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR PA+F G G+ PTY R R G + A SLD+ G I R RD A +++ I Sbjct: 174 DTAGSIRMPAAFCGVTGLMPTYDRVPRAGCVPLADSLDRLGPIARDARDCAAVMEVIG-- 231 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 +LP PD+ D + G+ VG+ +++ + + ++ + + G + Sbjct: 232 --------SLPPPDF----DADLAGLRVGVSRDW---TAAGDLTAAFESAVDVWEGLGVR 276 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +V+I LP A + + S R+ + L D L Sbjct: 277 LVDIDLPLLPELTTAVIVTA---VSEGFVRH---QADLPARWHDYLPTT----------- 319 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 R ++ T S + Y +A+ +R R E F + VD I++PT A L Sbjct: 320 ---RALLATATFMS---GADYAQAQHVRRAAGRRLRELFGR-VDAIVSPTALIPAPLLDT 372 Query: 419 EENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 N G I + + T N P ++VP +PL +Q+ G EET+ + Sbjct: 373 LTNEYGQQNDDAILSRINTPYWNGVANPVLAVPIGFDSAGLPLSMQIAGACDDEETILRL 432 Query: 477 GQIIEKEAGYFR 488 G + + R Sbjct: 433 GAAYQGATDWHR 444 >gi|256784138|ref|ZP_05522569.1| secreted amidase [Streptomyces lividans TK24] gi|289768019|ref|ZP_06527397.1| secreted amidase [Streptomyces lividans TK24] gi|289698218|gb|EFD65647.1| secreted amidase [Streptomyces lividans TK24] Length = 535 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 145/503 (28%), Positives = 239/503 (47%), Gaps = 42/503 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + + E + R+ +S++ L +Y++ I+ + ++NA + R AA SD R Sbjct: 51 LDTVTIPELQARMNRGSLSSLRLTLTYLRRIKAVDPRINAVLRTSPTALRQAAA-SDLRH 109 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L+GIP+ +KD T+G+ T A S L G P ++ + KL GAV+LGK Sbjct: 110 RLGRTRGPLDGIPVLLKDNVNTRGMPTTAGSLALAGSPPDTDAVLVGKLRAAGAVILGKA 169 Query: 123 NMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ E+A ++ TS + V + D+ P GSS GS+AA+A L +IGT+T Sbjct: 170 NLSEWANFRAAKPTSGWSAVGGQTNNPYVLDR-NPCGSSSGSAAALAASLAQVAIGTETD 228 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA G VG+KP+ G S+ G++ + D AG + R V D+A+ L ++G D Sbjct: 229 GSIVCPAGMNGVVGLKPSLGVVSQSGVVPISAEQDTAGPMARNVIDTALTLSVLSGRDTV 288 Query: 242 DATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 A P + A+ + +++G +G+ +RL L +D + L AGA++ Sbjct: 289 RAGD----APSFTDAVGRPGTLRGKRIGL---WRLPSLGAEVDALMTRTAERLTAAGAEV 341 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE------NTRSI 353 VE+SLP+ + + +E ++ Y R G R D+ E+ E RS Sbjct: 342 VEVSLPYQERLAELEFPALLSEFHRDIDAYLATRSGPR----DLAELIEFNRTHPRERSC 397 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAF-EQGVDVILTPTTPT 411 GQE+ + + + D Y R ++ L +R E +D I +P P Sbjct: 398 FAGQELFEQALA-----APSTTDPEYRAMRAELTDLSRRSIDEVMAAHDLDAIASPANP- 451 Query: 412 SAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P + G NDV + +AG P++SVPA ++P+GL L+ + Sbjct: 452 ---PAWTTDCARGD-----NDVIPSSTPAAVAGYPSLSVPAGFV-GELPVGLLLMAGNRQ 502 Query: 470 EETLFSVGQIIEKEAGYFRPHKW 492 + L S+G +E +R ++ Sbjct: 503 DVELLSLGAAVEHRLDAWRAPRY 525 >gi|298486732|ref|ZP_07004788.1| putative amidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158599|gb|EFH99663.1| putative amidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 467 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 136/486 (27%), Positives = 207/486 (42%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 4 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 179 GSFCGAFALKGTLGRIPTWPW-SATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 237 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPH 306 P + DQ + + +G PT+ D I+ +A + SLP Sbjct: 238 APDESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPV 288 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG L + GF ++ Sbjct: 289 TVSTLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR----- 337 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S++ S YL+A + R FE D+++ PT P F P G Sbjct: 338 ----SAQHSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAG 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + G++ FT NM G PA ++P +P+GLQ++G F + + + Sbjct: 393 QD-GALPWARWTPFTYPFNMTGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFCAAV 451 Query: 481 EKEAGY 486 E A + Sbjct: 452 EAIAPW 457 >gi|148557287|ref|YP_001264869.1| amidase [Sphingomonas wittichii RW1] gi|148502477|gb|ABQ70731.1| Amidase [Sphingomonas wittichii RW1] Length = 450 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 132/493 (26%), Positives = 204/493 (41%), Gaps = 55/493 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E + V+E R R + +S VE+ I + ++ A+ + ++AR AA +++ Sbjct: 1 MDEAFDLDVTELGSRYRDRTLSPVEVEQGLSARIARLDPELGAFTALAGEEARTAARQAE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFR---PHYESTVTQKLWDNGA 116 + G D L G+P+ +KD T+ + T A L GF P ++ V +L + GA Sbjct: 61 AELAAGIDRGPLHGVPVTVKDLCLTRDMPTAAG---LRGFAERLPRRDAAVVARLREAGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVIS-PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 V++GK + ++ P P+ PG SS G+ AVA LC+ + Sbjct: 118 VLVGKTY--------TTAGAFVDPAADRPFPRHPGRADIFPGMSSTGAGVAVAAGLCSVA 169 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IGTDTGGSIR P+ G G KP Y R G+ APSLD G I R+V D A + AI Sbjct: 170 IGTDTGGSIRLPSMCCGVSGFKPAYRRVDAEGVFESAPSLDHVGPIARSVADLAAAMTAI 229 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 G E RAL + + +G+ + L+ P ++ I + Sbjct: 230 -GEGES------------PRALVTDLAAVRIGVDRRA-LELTGPKSRGAIERAIGLFGEL 275 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G VE++LP L A + E ++ A + Y R + Sbjct: 276 GVTAVEVTLPPVAELLAATGRLQAWETAAVHAAW-----------------YPAHRG-DY 317 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G + I G + + D +RA R +A VD+I+ P T P Sbjct: 318 GPGLAATIDRGRAMQAGDLDDFEAVRA------AYRQQLDALFATVDLIILPVL-TIDTP 370 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E + FT N+ G PA+++P +PLG QL+ +P E L Sbjct: 371 TLDEWEGAMRQADPLGARFTKPFNVTGHPALALPGGFDADGLPLGFQLVARPADEAFLLG 430 Query: 476 VGQIIEKEAGYFR 488 G +K + + R Sbjct: 431 AGVAFQKISDWHR 443 >gi|158315923|ref|YP_001508431.1| amidase [Frankia sp. EAN1pec] gi|158111328|gb|ABW13525.1| Amidase [Frankia sp. EAN1pec] Length = 483 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 142/488 (29%), Positives = 219/488 (44%), Gaps = 45/488 (9%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 D+++ EL D I IE + +NA +AR AA +D+ G+ R L GIP+ +K Sbjct: 19 DVTSAELTDEAIARIERDDKVINAICVPDFDRARDAARGADQARARGEDRPLLGIPVTVK 78 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 + + G+ T + P ++ +L GAV+LGK N+ + YG Sbjct: 79 ESYNIAGLPTTWGMPQHANYLPAEDAVQVSRLKAAGAVVLGKTNVPLGLQDIQSFNEIYG 138 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW D+ TPGGSSGGS+AA+A A SI +D GS+R PA F G KPT Sbjct: 139 TTNNPW----DHDR-TPGGSSGGSAAALASGFGALSIASDIAGSLRTPAHFCGVYAHKPT 193 Query: 200 YGRCSRLGIIS-FAPSLDQ------AGIITRTVRDSAILLKAIAGYDECD---ATCVNLP 249 G + G+++ AP+L G + RT RD +LL +AG D A V LP Sbjct: 194 LGLAASRGMVAPPAPALPTDLDLAVVGPMARTARDLTLLLDVMAGPDPLTLGVAHNVALP 253 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +ER D V + E+ L + Q L D GA+ VE P Sbjct: 254 PARHERLAD-----FRVLVLDEHPLIPTGSAVRAGVHQVADALVDGGAR-VERHTPLLPD 307 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A + + S ++AR+ +E YE R+ G R + + Sbjct: 308 LTEAATLYTQLLFSGSVARFP-------------VEAYEQLRTRAAGLSADDRSLDAARL 354 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-------PLGKEENN 422 + ++ A R L + + + F + DV++ P TPT AF PL + + Sbjct: 355 RAMVFSHRDWIEANNRRELHRHGWRQLFAE-FDVVVCPITPTPAFGHDHNPNPLERRIDI 413 Query: 423 SGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G + + Y D +A M GLPA ++PA + +P+G+QLIG F + T + +++ Sbjct: 414 DG-VEYPYFDQLVLAGLATMPGLPATAIPAGRSPEGLPVGVQLIGPMFEDRTPLRLAELL 472 Query: 481 EKEAGYFR 488 E++ G F+ Sbjct: 473 EQKIGGFQ 480 >gi|238059497|ref|ZP_04604206.1| amidase [Micromonospora sp. ATCC 39149] gi|237881308|gb|EEP70136.1| amidase [Micromonospora sp. ATCC 39149] Length = 553 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 207/478 (43%), Gaps = 61/478 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V+E+ +R+ ++ +LV++Y+ I + A+ V+A+ A AA K+ G Sbjct: 82 LTVAEAAWLIRAGRLTPAKLVEAYLARISTYDGTYQAFNLVLAEAAAKAATALAKKPRRG 141 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ IKD + T G+ T A S++ FRP Y++T +L GA++LGK M Sbjct: 142 A---LHGIPLAIKDNYYTAGVPTTANSYLFADFRPPYDATAVSRLLAGGAIVLGKTQMGP 198 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 A + + ++ W D ++ PGGSS G++ AVAG L A+ GT TGGSI Sbjct: 199 LATTRATTPNGVVTTVNAWTPTD--NRTDPGGSSTGTATAVAGRLAASGTGTQTGGSITA 256 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P++ G+KPT GR S GII + + D G + R +D+AI+L A+AG D D Sbjct: 257 PSNAQNLTGLKPTMGRVSLHGIIPLSYTRDHPGPLARDAKDAAIMLTAMAGEDPADPRTQ 316 Query: 247 NLP-VPDYERALDQSIQGMTVGIPKEYRLDYL-------SPTIDKTWQQGISWLKDAGAK 298 LP VP A G +G+ + R+ L + T GA Sbjct: 317 GLPAVPKLIDAATPVYFGGRLGLRWKTRIGVLPGFTAGTTETAAARAAYLAKLAAIPGAT 376 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +V++ LP L + ++ VR R E Y T GFG Sbjct: 377 VVDVPLPDEWDLLTG-------------SAFNNVRLPERSE---PFLPYLRTDLRGFGVS 420 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V ++ + S ++ ++ + L+ + DV++ T+P Sbjct: 421 VTG------WLQGALMGGSEFITGQRAKLLLMERVLDQLFASCDVVVQ-TSP-------- 465 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 V ++ GLP I+ P +P+G L G P+ E+ L SV Sbjct: 466 -----------------VPFDILGLPEIAFPIGFTTTGVPIGTILGGLPYGEDRLLSV 506 >gi|148554568|ref|YP_001262150.1| amidase [Sphingomonas wittichii RW1] gi|148499758|gb|ABQ68012.1| Amidase [Sphingomonas wittichii RW1] Length = 469 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 135/491 (27%), Positives = 227/491 (46%), Gaps = 65/491 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL ++ SE ++ + ++++ ELV++++ I+ N ++NA + V+ +A AA ++D Sbjct: 1 MSELWRLSASEMVRQMAAGEVTSRELVEAHLARIDAVNPRVNAVVRVLRDEALKAAGDAD 60 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 ++ G AR L G+P IKDC G+ T S +L ++ V +K+ GA+ Sbjct: 61 RKRWEG-ARLGSLHGVPFTIKDCIDVAGLPTTWGSAVLAEAISPVDAPVVEKMRAAGAIP 119 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G+ N+ +FAM S ++S YG +PW D+ T GGSSGG +AA+A + +G+ Sbjct: 120 IGRTNLPDFAMRPSTDSSLYGLTRNPW----DHDR-TAGGSSGGDAAALASGMTPIGLGS 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ---------AGIITRTVRDSA 229 D GGS+R PA+ G V ++P+ GR I P DQ G + RTV D Sbjct: 175 DLGGSLRNPANACGIVSVRPSAGRVP---IAQQVPGPDQHISNQLMNVQGPMARTVADVR 231 Query: 230 ILLKAIAGYDE-----CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 ++L+ I G DA V P+P R ++ G P E + Sbjct: 232 LVLETIIGAHPKDPWAIDAPLVGKPIPSPIRV---AVLTTLPGAPLES-------AVADA 281 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 + L +AG +VE P + A+ + I + R+G EG L Sbjct: 282 VRGAADALANAGYDVVEACPPRYEEAIETWGQIIVGDQ----------RFG--AEGVLPL 329 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI--RTLIKRDFTEAFEQGVD 402 + R F Y+ + S + + + R I +++ AF++ Sbjct: 330 LSPDTLRYFNF------------YLDGVPPFASSFEMSEALIRRHAIAMEWS-AFQEDHP 376 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA-VNMAGLPAISVPAAL-CEKKMPLG 460 +IL PT T P + +GS+ + + V N+ GLP++ VP+ L +P+G Sbjct: 377 IILGPTW-TRVTPGHGYDLEAGSLAGLLETIRPVTPANLLGLPSVCVPSRLDPATGLPIG 435 Query: 461 LQLIGQPFREE 471 + + G+ FRE+ Sbjct: 436 VLVGGRRFRED 446 >gi|87307876|ref|ZP_01090019.1| hypothetical protein DSM3645_23356 [Blastopirellula marina DSM 3645] gi|87289490|gb|EAQ81381.1| hypothetical protein DSM3645_23356 [Blastopirellula marina DSM 3645] Length = 472 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 137/463 (29%), Positives = 200/463 (43%), Gaps = 37/463 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E + ++S VE + +Q + + N ++NAY + + AA S++R G Sbjct: 11 MTAGEMTVLFETGELSPVEAAQACLQRVHDHNPKVNAYNLLNEELTFEAARYSEERWRLG 70 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++G+P+ +KD F T+G + S + ++ L NG V LG+ Sbjct: 71 TPLGPIDGVPVAVKDIFLTQGWPNRKGSLLTSAEPQTVDAPAIAALRRNGFVPLGRTTTP 130 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF + G +PW D T GSSGGS AAVA + ++GTD GGSIR Sbjct: 131 EFGWKGVTDNPLDGVTCNPW---DPTKVSG--GSSGGSGAAVALGMGPLALGTDAGGSIR 185 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA F G VG KPT+G C +F P L G +T TV D+A+LL +A D D T Sbjct: 186 IPAGFCGVVGFKPTHGLCPMWPPSAFDP-LAHVGPMTWTVADNALLLDVLAEPDPRDVTL 244 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V + D ++ G+ + + + P + S ++AGA IVE P Sbjct: 245 PANQVSFRDALEDANVAGLRIAFSANFGFVDVDPEVAAAVAAAASQFEEAGA-IVETCDP 303 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIM 364 L A+ N Y G LR + +D +M N + Sbjct: 304 GFSDPLEAF----------NRLFYAGAANALRDIGAEDRQKMDPNLIHVA-------EWA 346 Query: 365 IGTYVLSSRCYDSHYLRARKIR-TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 G +L +++AR R LI+R F Q D++LTP+ P AF G E Sbjct: 347 TGLSLL-------EFMQARNERAALIER--MSKFHQKWDLLLTPSLPIPAFDAGLEVPQG 397 Query: 424 GSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 FT NM G PAISVP + +P+GLQ++G Sbjct: 398 WPHERWPTWTPFTYPFNMTGQPAISVPCGFTKSGLPIGLQIVG 440 >gi|163747235|ref|ZP_02154590.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Oceanibulbus indolifex HEL-45] gi|161379510|gb|EDQ03924.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Oceanibulbus indolifex HEL-45] Length = 453 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 136/464 (29%), Positives = 203/464 (43%), Gaps = 58/464 (12%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V+ RDRL S + A+ LVDSYI IE +++ A+ + ARA A D +G Sbjct: 16 SVTLLRDRLASGALDALTLVDSYIARIEAREAEVGAWAWFDPEFARAQARNLDAYRRSGR 75 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P+ +KD T I T+ C D P ++ V ++L GA+++GK Sbjct: 76 PLGRLHGLPVALKDVIDTAKIPTENGCVRDADRI-PLRDAFVVERLKKEGAIIMGKTVTT 134 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E A + P ++ + + TPGGSS GS+AAVA + +IGT TGGSI Sbjct: 135 ELAF------------MHPGKTANPHNLAHTPGGSSQGSAAAVADGMVPLAIGTQTGGSI 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 +PASF G G KPT+G R GI++ +P+LD G+ +A+L + + G D D+ Sbjct: 183 IRPASFCGVTGYKPTFGAIPRRGILAQSPTLDTVGVFASDPAGAALLAEILFGDDPEDSA 242 Query: 245 CVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEI 302 P P + AL + G K D T D+ + L DA G + E+ Sbjct: 243 TALQPTPALHTAALSKPPIAPVFGFVKPPGWD----TADQQMRSAFDELVDALGDQAFEM 298 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG--FGQEVK 360 LP I + A + + Y Y R +G GQ + Sbjct: 299 PLPA---------IFNDAAEQRKKINFAEMAY----------HYYPYARDMGDSLGQVTR 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 I G V + YL A + L+ E + D IL P T P G E Sbjct: 340 DAIAEGNAVPA-----RDYLSACDMPKLLNAALDEMLTR-CDAILCPAA-TGPAPNGLET 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 I+N ++T + G P I++P E+ +P+G+QL+ Sbjct: 393 TGD----PIFNGLWT----LCGTPCITLPMLTSEEGLPMGVQLV 428 >gi|307942528|ref|ZP_07657876.1| indoleacetamide hydrolase [Roseibium sp. TrichSKD4] gi|307774167|gb|EFO33380.1| indoleacetamide hydrolase [Roseibium sp. TrichSKD4] Length = 483 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 132/493 (26%), Positives = 229/493 (46%), Gaps = 56/493 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA--EESD 60 L + SE+ ++ S +S VD+ + I + + NA+I + A A++AA E S+ Sbjct: 24 NLKDLTASEAAAQIASGALSPQAYVDALLNRI--GDDRGNAFITLDADGAKSAALKEPSE 81 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K L G+PI +KD A +G+ T A + L +RP ++ V ++L GA++LG Sbjct: 82 KG-------PLFGVPIVVKDNIAVQGLPTTAGTPALANWRPAKDAPVVERLRKAGAIILG 134 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E A G ++ + +G V + + S D+F G S G +A A F +GTDT Sbjct: 135 KTNLHELAFGITSNNAVHGAVANAYAS----DRFAGGSSGGTGAAIGARF-APVGLGTDT 189 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ G G +P+ GR + GI+ + + D AG + R+++D IL+ + Sbjct: 190 GGSVRIPAALNGVYGFRPSVGRYPQAGIVPISHTRDTAGPLARSMKD-IILIDGVITNGT 248 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 +NL G+ VGIP + ++ D+ + + L+ AG +V Sbjct: 249 TTLGALNL-------------SGVRVGIPSAFN-GHVDGETDRLVKAALEKLEAAGVTLV 294 Query: 301 EISLP-----HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIG 354 + L + Q P I+ EA +++++ + GL + D L + + Sbjct: 295 TLDLADIQDLNGQIGFP----IALFEAKQDISKFLEKNETGLTI---DQLAAEITSPDVK 347 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSA 413 F V +++G + Y S +R ++ + E F + +D + PTTP A Sbjct: 348 F---VFDNMILGDQAVPEVAYRSVM---NDLRPKLQARYAEVFADHRLDALAFPTTPLPA 401 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEKKMPLGLQLIGQPF 468 P+ + +G T N AGLP++S+P L +P+GL+L G F Sbjct: 402 QPISGSDLEVELLGAKVPTFQTFIRNTDPGSNAGLPSLSIPVGLTSDGLPVGLELDGPAF 461 Query: 469 REETLFSVGQIIE 481 + L ++G ++ Sbjct: 462 SDRHLLALGLAVD 474 >gi|47566838|ref|ZP_00237556.1| amidase family protein [Bacillus cereus G9241] gi|47556467|gb|EAL14800.1| amidase family protein [Bacillus cereus G9241] Length = 491 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 139/499 (27%), Positives = 221/499 (44%), Gaps = 54/499 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + + +++ ELV Y+ I + ++N+ +E+ A R Sbjct: 13 LTIYDIQEMMEAGQLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHDRK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S + ++ G I+P+ + + D GGSS GS+ AV S+G Sbjct: 133 NMTELANGMSFDMWAGYSARGGQAINPYGTGE--DDMFVGGSSTGSAIAVTANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PA VGIKPT G SR GII F S D AG RTV D+AILL + G Sbjct: 191 TETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGGLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSP--TIDKTWQQGISW 291 DE D + DY + LD + G +G+ + DY +K +++ I Sbjct: 251 IDERDVATRKSEGIAEHDYTKYLDVNGLHGTKIGVYNNAQKDYYESGEYDEKLFKETIEV 310 Query: 292 LKDAGAKIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEM 346 L+ GA +VE I++P H ++ + +S E +L Y + + V +++E Sbjct: 311 LRSKGATVVEDINIPSFHREWR----WGVSLYELKHSLDNYLSKLPSTIPVHSISELMEF 366 Query: 347 YENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 EN R++ +GQ R + + + YL AR D + EQG+D Sbjct: 367 NENIAERALKYGQTKLER----RKDIPNTLRNPEYLNAR------LEDIYFSQEQGIDFA 416 Query: 405 LTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 L + FP + + + AG P+I++PA E P G+ Sbjct: 417 LEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFGITF 461 Query: 464 IGQPFREETLFSVGQIIEK 482 F E L + E+ Sbjct: 462 ASTAFSEGILIKLAYAFEQ 480 >gi|288541451|gb|ADC45523.1| secreted amidase [Streptomyces nanchangensis] Length = 537 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 145/502 (28%), Positives = 240/502 (47%), Gaps = 45/502 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + E + RL +++ L +Y++ IE + +++A + R AA SD R Sbjct: 54 DLDTVTIPELQARLADGSLTSTALTTAYLRRIEAVDPKIHAVLRTDPTALRQAAA-SDTR 112 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +GD R L+GIP+ +KD T+ + T A S L G P ++ + +L + GAV+LGK Sbjct: 113 HRSGDTRGPLDGIPVLLKDNVNTRDMPTTAGSLALAGSPPDVDAALVTRLRNAGAVILGK 172 Query: 122 LNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 N+ E+A ++ TS + V + D+ P GSS GS AA+A L +IGT+T Sbjct: 173 TNLSEWANFRAAKPTSGWSAVGGQTNNPYVLDR-NPCGSSAGSGAALAASLAQVAIGTET 231 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PA G VG KP+ G S+ G++ + D AG + R V D+A++L I+G Sbjct: 232 DGSIVCPAGMNGVVGHKPSLGLVSQAGVVPISAEQDTAGPMARNVTDTALILSVISGTSR 291 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + D E S++G +G+ +RL L P +D + L+ AGA++V Sbjct: 292 PGGPGG---LAD-ELTHPSSLRGKRIGL---WRLPSLGPQVDALMTRTAEKLRTAGAEVV 344 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS-----IGF 355 E++ P+ Q + +E ++ Y R G R ++ E+ E R+ I F Sbjct: 345 EVTPPYQQRLAELEFPALLSEFHRDIDAYLATRDGPR----NLAELVEFNRTHPAERICF 400 Query: 356 -GQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFE-QGVDVILTPTTPTS 412 GQE+ + + + D Y R +++ L +R E +D I PT P Sbjct: 401 AGQELFEQALA-----APPTTDPGYRAMRAELKDLSRRSIDETMAAHRLDAIAAPTNP-- 453 Query: 413 AFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P + G NDV + ++G P++SVP+ ++ +P+GL L+ ++ Sbjct: 454 --PAWTTDCARGD-----NDVIPSSTPAAVSGYPSLSVPSGFVDE-LPVGLLLMAGDHQD 505 Query: 471 ETLFSVGQIIEKEAGYFRPHKW 492 L S+G +E R H W Sbjct: 506 AGLLSLGAAVE-----HRLHAW 522 >gi|224078133|ref|XP_002305492.1| predicted protein [Populus trichocarpa] gi|222848456|gb|EEE86003.1| predicted protein [Populus trichocarpa] Length = 521 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 231/501 (46%), Gaps = 60/501 (11%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +++ +LV+ Y+ I+ N +++ +EV A + + R N Sbjct: 41 IQEIQQAFAQNKLTSKQLVNFYLDRIQELNPLLHSVLEVNPDALEQAGKADEDRERNKGK 100 Query: 69 R---DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R DL GIP+ +KD TK ++T S+ L G ++ V +KL + GAV+LGK ++ Sbjct: 101 RFLGDLHGIPVLLKDSIGTKDKLNTTCGSYALVGSEVARDAHVVEKLRNAGAVILGKASL 160 Query: 125 DEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+ S + + G +P+ ++S D P GSS GS+ +VA + A S+GT+ Sbjct: 161 SEWYNCRSFDIPDGWCARGGLAKNPY--VESAD---PCGSSSGSAISVAANMVAVSLGTE 215 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA VG+KPT G SR G+I +P D G I RTV D+ +L AI G+D Sbjct: 216 TDGSIICPADHNSVVGLKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVYVLDAIVGFD 275 Query: 240 ECDATCVN-----LPVPDYERALDQS-IQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWL 292 D+ +P Y++ L + ++G VGI + LD + T+ T+ + L Sbjct: 276 PRDSQATTKAAEFIPAGGYKQFLKKDGLKGKRVGIVRNPFLDSFNDSTVISTFNHHLEVL 335 Query: 293 KDAGAKIVE-ISLPHTQYALPAY----YIISPAEASSNLARY--DGVRYGLRVEGKDILE 345 + GA IV+ + + + L Y I+ AE + +Y + ++ +R DI+ Sbjct: 336 RQGGANIVDNLQIDNIAVILDPYRSGEVIVMLAEFKLTIKQYLEELIKSPVRSLA-DIIA 394 Query: 346 MYENTRSI----GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 N + +GQE+ +L++ + K+ L+++ E FE+ + Sbjct: 395 FNNNNPDLESMSKYGQEL---------LLAAEMTNGLGEEEMKLVKLMEQLSEEGFEKMM 445 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 +EN+ +M + DV TV + + G PA++VPA K P G+ Sbjct: 446 -----------------KENDLDAMLTLGVDVSTV-LAIGGYPALTVPAGYDSKGKPFGI 487 Query: 462 QLIGQPFREETLFSVGQIIEK 482 G E L V E+ Sbjct: 488 CFGGLKGMEPKLIEVAYAFEQ 508 >gi|187922073|ref|YP_001893715.1| amidase [Burkholderia phytofirmans PsJN] gi|187713267|gb|ACD14491.1| Amidase [Burkholderia phytofirmans PsJN] Length = 483 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 133/492 (27%), Positives = 223/492 (45%), Gaps = 53/492 (10%) Query: 5 NFM-AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 N M V+++ +R +++ VELV + +I+ N ++A+ +V A++A AE + Sbjct: 15 NLMPTVADAAASIRCGELTPVELVQRCLDSIKTHNPTLHAFGDVYAEEALRYAETLTREA 74 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 R L G+P IKD FAT G+ T S + P ++ V ++L + GA++LGK Sbjct: 75 KENRTRGGLHGVPFAIKDLFATAGLRTTRGSLTAMNWVPQEDAPVIRRLKEAGAILLGKA 134 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 EF ++ + +G +PW + + T GGSS GS+ +VA + AS+G+D GG Sbjct: 135 ATTEFGWSGASYSRVFGNGCNPWDA-----RLTSGGSSSGSAISVAARMVPASLGSDGGG 189 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R P++F G +K ++GR S L AG ITRTVRDSA+L +AG D D Sbjct: 190 SVRIPSAFCGVFAMKGSHGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLAGPDSRD 248 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + Y ++ ++ + V P + +D + P I + + + A A ++ Sbjct: 249 HQALPAATGSYLARCEEPLKRVRVAFCPTLFGVD-VDPEISRVVGAAVE--RIARALPID 305 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + +P + P L ++ ++ R I +GQ +K+ Sbjct: 306 LEMPVLGWHDP-------------LPTFE--------------TLWVAGRGIVYGQTLKN 338 Query: 362 ---RIMIGTYVLSSRCYD---SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF- 414 ++ G L R D YL A + R F+ D +LTPT P F Sbjct: 339 CADQLDPGFARLIGRASDYSLEDYLTAIQRRATFACQVHALFDT-YDFLLTPTLPILPFD 397 Query: 415 -----PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P + ++S + FT N++G PA S+P + +P+GLQ++G F Sbjct: 398 ADLIAPPELDTHDSALPWACWTP-FTYPFNLSGNPAASLPCGWSDTGLPVGLQVVGPRFA 456 Query: 470 EETLFSVGQIIE 481 + + IE Sbjct: 457 DADVLQFCSAIE 468 >gi|295699858|ref|YP_003607751.1| amidase [Burkholderia sp. CCGE1002] gi|295439071|gb|ADG18240.1| Amidase [Burkholderia sp. CCGE1002] Length = 484 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 134/483 (27%), Positives = 214/483 (44%), Gaps = 85/483 (17%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA + A AAA+ D AR L G+PI +KD T G+ T A + L F Sbjct: 45 NALTTLDFHGALAAAQRIDALPPAERARLPLCGLPIVVKDNINTAGLPTTAGTPALASFV 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGG 158 P + Q+L D GAV+LGK NM E A G S+N +++ GPV +P+ PGG Sbjct: 105 PTTSAPSVQRLVDAGAVVLGKANMHELAFGITSTNLSAHAGPVRNPYDP-----SLMPGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISF 211 SSGG++ A+A + A +GTDTGGS R PA+ TGT G++P+ G ++ Sbjct: 160 SSGGTAVAIAARIAPAGLGTDTGGSTRIPAALTGTAGLRPSVGNGGAERRYHDPNAVVPI 219 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + + D G + R+V D A+L I G LP E ALD G+ +G+P Sbjct: 220 SHTRDTVGPMARSVADLALLDGVITGDGA-------LP----EIALD----GLRIGLPAP 264 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA----------------LPAYY 315 D L ++ + + L+ AG V +++ +Y + A+ Sbjct: 265 L-WDALERQVEDVARAALHKLEAAGVTFVPVAMTELEYLNGMVGGPLAIHEARDDVLAWL 323 Query: 316 II--SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + +P ++LA +R+ D+ +Y++ + G + Sbjct: 324 VANQAPVRTVADLA--------VRIASPDVRAIYDDVLADVLGSHYSAAL---------- 365 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIY 430 +Y R R ++ + F A G+D +L PTT A P+ + N S ++ G Sbjct: 366 ----NYWRPR-LQNYVAATFANA---GLDALLFPTTRLVAVPI-DDLNGSSTVTIDGGPP 416 Query: 431 NDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 D T + +G+P +S+PA + +P+GL+L G + L ++G IE+ Sbjct: 417 IDTMEAFLRNTDPASTSGIPGLSLPAGISASGLPVGLELDGPLGSDRRLLAIGVAIEQVL 476 Query: 485 GYF 487 G Sbjct: 477 GAL 479 >gi|221065103|ref|ZP_03541208.1| Amidase [Comamonas testosteroni KF-1] gi|220710126|gb|EED65494.1| Amidase [Comamonas testosteroni KF-1] Length = 454 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 133/483 (27%), Positives = 215/483 (44%), Gaps = 62/483 (12%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMN--AYIEVVAQKARAAAEESDKRIINGDARD- 70 +RL SAV+L + QA+E + + V+ ++A A A SD G AR Sbjct: 13 ERLAQGQTSAVQLAE---QALERATQGEGPRVFTRVLPEQALAEARASDALRAAGLARSP 69 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAM 129 LEG+PI +KD F G T S +L P ++ V Q+L GAV++G NM EFA Sbjct: 70 LEGLPISVKDLFDIAGHPTLGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEFAY 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW+ + + PGGSS G++ +V + A+IG+DTGGS+R P++ Sbjct: 130 SGLGLNPHYGTPRNPWQRENDGGRI-PGGSSSGAAISVTDGMALAAIGSDTGGSVRIPSA 188 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G++ + +LD G + +VR A L ++G + + Sbjct: 189 LCGLTGFKPTARRVPMQGVLPLSANLDSIGPLAPSVRCCAALDAVLSGESQGELRAA--- 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 S+QG+ + P LD + + WQ+ +S L AG +I E +P Sbjct: 246 ----------SLQGLRLLTPTNVVLDGMDSAVAAAWQRALSLLYAAGVQITEAVVPPF-- 293 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI--GFGQEVKHRIMIGT 367 S LA+ + G E + RS G G+ ++ +GT Sbjct: 294 --------------SELAQINA------KGGFTAAEAWAWHRSHIDGAGRLAEYDPRVGT 333 Query: 368 YVLSSR---CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS- 423 +L + D L AR+ + + + +A D++L PT P A + + E + Sbjct: 334 RILRGKDISAADYIELLARRQQWIAR---VQAQMADHDLMLMPTVPVIAPKIAELEASDE 390 Query: 424 ---GSMGHIYNDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQ 478 + G + + +N A+S+P C + + P+GL L G +++ L SV Sbjct: 391 AYFAANGLMLRN--PTLINFLDGCAVSLP---CHRPGEAPVGLSLAGTAAQDQRLLSVAL 445 Query: 479 IIE 481 +E Sbjct: 446 AVE 448 >gi|328949776|ref|YP_004367111.1| Amidase [Marinithermus hydrothermalis DSM 14884] gi|328450100|gb|AEB11001.1| Amidase [Marinithermus hydrothermalis DSM 14884] Length = 483 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 147/503 (29%), Positives = 227/503 (45%), Gaps = 69/503 (13%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESDKRII 64 ++ E + ++ ++A+EL Y++ IE + ++N+ +EV A +R Sbjct: 12 SIPELQAAMQDGRLTALELTRYYLERIERYDRAGPRLNSVLEVNPDALAQAQALDAERAA 71 Query: 65 NGDARDLEGIPIGIKDCFATKG-IHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A S + D P ++ + +KL GAV+LGK Sbjct: 72 RGPRGPLHGIPVLLKDNIDTADRMHTSAGSLAMKDAIAPQ-DAFLVRKLRKAGAVLLGKT 130 Query: 123 NMDEFA----MG-SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E+A +G +S G V++P+ + F PGGSS GS A + L AA++G Sbjct: 131 NMTEWANFMTVGMPPGYSSRGGQVVNPYGA-----AFHPGGSSAGSGVAPSANLAAAAVG 185 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PAS VGIKPT G SR GII + + D AG + RTV D+AILL +AG Sbjct: 186 TETQGSILNPASQNAIVGIKPTVGLVSRSGIIPISATQDTAGPMARTVTDAAILLSVLAG 245 Query: 238 YDECDATCVNLP--VP-DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D D P +P DY LD ++G +G+P+ + S ++ I L+ Sbjct: 246 EDPKDPATQRRPKDLPQDYTAFLDPDGLKGARIGVPRAAFFEKPSAEARAVLEEAIQALR 305 Query: 294 DAGAKIVEIS-LP--HTQYALPAYYIISPAEASSNLARY----------DGVRYGLRVEG 340 D GA +++ + LP H +AL ++ E L RY ++ +R Sbjct: 306 DLGATVIDPADLPTAHEVFALGIEVLLY--EFKQELNRYFRTLGPNAPIHSLQELIRYNE 363 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 EM + + E + TY Y RA+ + + K F Q Sbjct: 364 AHPEEMLRYGQVLLLAAESAAGVESPTY---------RYHRAKDLE-VCKGGLDATFAQH 413 Query: 401 -VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 +D ++ FP+ N S+G AG P+++VPA P+ Sbjct: 414 RLDALV--------FPM----NWGASVG-----------AKAGYPSLTVPAGYTPAGQPV 450 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 GL +G + E TL + E+ Sbjct: 451 GLTFLGPAWSEATLIRLAYAFEQ 473 >gi|229155674|ref|ZP_04283781.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus ATCC 4342] gi|228627786|gb|EEK84506.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus ATCC 4342] Length = 493 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 143/493 (29%), Positives = 220/493 (44%), Gaps = 60/493 (12%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + +++ ELV Y+ I + ++N+ +E+ A R G L Sbjct: 24 MEAGQLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDYDRKTKGVRGPLH 83 Query: 73 GIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK NM E A G Sbjct: 84 GIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKTNMTELANGM 143 Query: 132 SNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S + ++ G I+P+ + + D GGSS GS+ AV S+GT+T GSI Sbjct: 144 SFDMWAGYSARGGQAINPYGTGE--DDMFVGGSSTGSAIAVTANFTVVSVGTETDGSILS 201 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VGIKPT G SR GII F S D AG RTV D+AILL + G DE D Sbjct: 202 PAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGGVTGVDERDVATR 261 Query: 247 N---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQGISWLKDAGA 297 + DY + LD + G +G+ PK+Y Y S D K +++ I L+ GA Sbjct: 262 KSEGIAEHDYTKYLDVNGLNGTKIGVYNNAPKDY---YESGEYDEKLFKETIEVLRSKGA 318 Query: 298 KIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT-- 350 +VE I++P H +++ + +S E +L Y + + V +++E EN Sbjct: 319 TVVEDINIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISELMEFNENIAE 374 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R++ +GQ R + + + YL AR D + EQG+D L Sbjct: 375 RALKYGQTKLER----RKDIPNTLRNPEYLNAR------LEDIYFSQEQGIDFALEKYNL 424 Query: 411 TS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + FP + + + AG P+I++PA E P G+ F Sbjct: 425 DAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFGITFASTAFS 469 Query: 470 EETLFSVGQIIEK 482 E L + E+ Sbjct: 470 EGILIKLAYAFEQ 482 >gi|222082635|ref|YP_002542000.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] gi|221727314|gb|ACM30403.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] Length = 475 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 136/487 (27%), Positives = 213/487 (43%), Gaps = 49/487 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L M+ +E S S VE + ++ IE N +NA+ VV + A AAA ES+ Sbjct: 7 TDLGEMSAAELSALFASGRASPVEAAKASLERIERFNPSVNAFAYVVPEMALAAARESEA 66 Query: 62 RIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+ ++G P IK+ KGI + S + E + ++L G +LG Sbjct: 67 RWQKGEPLSPIDGAPTTIKELTPVKGIPWRRGSALGSKEPSDKEFLIMKRLRGAGVTILG 126 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 EF +G ++PWR TD+ + G S G + AA + G+D Sbjct: 127 TTTSPEFGWKGVTHGPAFGNTLNPWR----TDRASGGSSGGAAVAAALN-MGVLHEGSDG 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIA 236 GSIR PASF G GIKPTYG I S PS L G +TRTV D+A+ L A Sbjct: 182 AGSIRIPASFCGVFGIKPTYGW-----IPSDTPSPLFELAHRGPLTRTVEDAALFLNATT 236 Query: 237 G--YDECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 G D C PVPD+++A+ + ++G+ +G + + P + ++ S L Sbjct: 237 GPTADAMYGYCPT-PVPDWQQAIKGADLKGLKIGYSRNLGYAQVQPDVAAAIERAASRLA 295 Query: 294 DAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + EI + Q AL A + Y D+ E + Sbjct: 296 EMGAIVEEIDPGFSNPQDALLALW------------------YAAEARTVDLANPTEEQK 337 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ ++ + S Y+ A ++R +K F + D ++ PT PT Sbjct: 338 ------KLMDPGLLRIHAKGSALTAIDYVIAEQVRADLKVRMAR-FHETYDALMLPTMPT 390 Query: 412 SAFPLGKEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 +A G + G G ++D FT NM G PA+SVP +P+GLQ +G +R Sbjct: 391 TAIEAGV-DFPGGVEGKDWSDWSPFTYPFNMTGQPAVSVPCGFDADSLPIGLQFVGPRYR 449 Query: 470 EETLFSV 476 ++ + + Sbjct: 450 DDIVLKL 456 >gi|312885662|ref|ZP_07745297.1| Amidase [Mucilaginibacter paludis DSM 18603] gi|311301869|gb|EFQ78903.1| Amidase [Mucilaginibacter paludis DSM 18603] Length = 549 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 149/502 (29%), Positives = 227/502 (45%), Gaps = 46/502 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESD 60 LN + + + +++S ++ + + Y I AI+ ++NA IE+ + A A+E D Sbjct: 55 LNEITIDALQQKMKSGAYTSRSICELYLKRIDAIDKKGPRLNAVIELNPE-ALQIADELD 113 Query: 61 KRIINGDARD-LEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + G R + GIP+ IKD T + T A + L+G ++ + Q+L GAV+ Sbjct: 114 QERKAGKIRGPMHGIPVLIKDNINTGDKMTTTAGALALEGNYAFKDAFIIQQLRKAGAVL 173 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLC 172 LGK N+ E+A SN ++ S W S K P GSS GS +AVA LC Sbjct: 174 LGKTNLSEWANFRSNRST------SAWSSRGGQTKMPYILDRNPSGSSSGSGSAVAANLC 227 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A +IGT+T GS+ PAS VGIKPT G SR GII + + D AG + RTV D+AILL Sbjct: 228 AVAIGTETDGSVVSPASVNSIVGIKPTVGLLSRSGIIPISKTQDTAGPMARTVTDAAILL 287 Query: 233 KAIAGYDECD---ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 A+ G D D A+ + Y LD +QG +GI K + + + Q Sbjct: 288 GALTGVDAEDAVTASSLGKAKGGYTTYLDVNGLQGKRIGIEKSFLKG--NDAVVALIQNA 345 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGL---RVEGKDIL 344 I LK GA +VE+ L L + AE + + + DGV L R K + Sbjct: 346 IEVLKRKGATVVEVEL------LKQLKNVGQAEFTVLIYEFKDGVDSYLAKARARVKSLK 399 Query: 345 EMYE-NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG--V 401 E+ + N R+ + + + YL A K T R+ ++ + + Sbjct: 400 EVVDFNNRNAAKAMPFFKQETLELALTKGGLKSKEYLAALKKTTGTSRNAIDSILKANRL 459 Query: 402 DVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D I PT + L + ++G F+ MAG P I+VP +P+G Sbjct: 460 DAIAGPTNGLACCIDLANGDYDTGFS-------FSSPAAMAGYPHITVPMGAVH-NLPIG 511 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 +G + E L ++ E+ Sbjct: 512 FSFLGTAYNEGELITLAYAFEQ 533 >gi|282901677|ref|ZP_06309593.1| Amidase [Cylindrospermopsis raciborskii CS-505] gi|281193440|gb|EFA68421.1| Amidase [Cylindrospermopsis raciborskii CS-505] Length = 464 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 139/494 (28%), Positives = 220/494 (44%), Gaps = 61/494 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L F E +R ++IS +EL + Y+ I N Q+ +Y V+A+ A A + Sbjct: 1 MTDLAFTPALELARLIRKREISPLELTELYLDRISRFNPQLGSYFTVMAESAIADSRYKT 60 Query: 61 KRIINGDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 + + N L G+PI IKD A G+ + L P+Y+ V K+ G V Sbjct: 61 EILANTRETALPPFFGVPISIKDLNAVAGVTCTYGNPTLVNNIPNYDDGVVTKIKQAGFV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK E E + P +PW ++TPGGSSGG+++AVA LCA + G Sbjct: 121 ILGKTATSELGSYPYTEPPGFPPARNPWNL-----EYTPGGSSGGAASAVAAGLCAIAQG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GGSIR PA+ G VGIKP GR + S + +G + RTV D+A +L AI+G Sbjct: 176 SDGGGSIRVPAACCGLVGIKPARGRVTNAPGTSI---IATSGPLARTVADAAAMLDAISG 232 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI---DKTWQQG----IS 290 Y D +N P P + + ++ G+ + P++ D QQG + Sbjct: 233 YFPGDPFWLNDPEPCFLES--RTKVGLNIAFSTSI------PSVGEADGNGQQGVLKAVR 284 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L++ G +VE P + + ++ +A AR IL+ Sbjct: 285 LLEELGHNVVE-KCPDISGLVQPFQVV--WQAGVAAARIP----------PQILQ----- 326 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 + ++L YLRA ++ R F+ +D+++ P Sbjct: 327 -------------PLNQFLLERTGSAGEYLRAVTQMQILSRQIVSFFDP-IDILVLPVYL 372 Query: 411 TSAFPLGK--EENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQP 467 S +G+ + N ++ I + + N GLPAIS+P +PL +QLIG+P Sbjct: 373 HSPMKIGEWSQLNPDDTLERIIKWIAPCPIANATGLPAISIPMGFDANGLPLSVQLIGKP 432 Query: 468 FREETLFSVGQIIE 481 E TL S+ +E Sbjct: 433 AAESTLISIASQLE 446 >gi|254426838|ref|ZP_05040545.1| Amidase, putative [Alcanivorax sp. DG881] gi|196193007|gb|EDX87966.1| Amidase, putative [Alcanivorax sp. DG881] Length = 468 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 132/483 (27%), Positives = 213/483 (44%), Gaps = 34/483 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL M+ + ++ +S VE+ ++ + +E + +NA+ + A E+++R Sbjct: 4 ELLTMSAQALKAAYQTGALSPVEVCNTLLDHVERHDEALNAWCLIDRDTTLQWAREAEQR 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLG 120 NG+A L+G+P+ +KD F T T S +D S L +G V LG Sbjct: 64 YQNGNADGLLDGVPVAVKDVFLTPMWPTLKGSKTIDPASTLEKRSPAVAALERHGYVPLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ GP +PW T GGSSGGS+AAV+ + ++GTD Sbjct: 124 KTTTPEFGWKGITDSPLCGPTNNPWDPSK-----TAGGSSGGSAAAVSAGMAPMALGTDA 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA F G VG KPT+ F +L AG +TRTV D+A+++ ++ D Sbjct: 179 GGSIRIPAGFCGIVGHKPTFSEVPHWPASPFG-TLAHAGPMTRTVADAALMMTVMSEADA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ DY AL Q I+G+ + + ++P I+K ++ + GA + Sbjct: 238 RDSLAAPRRGIDYVAALQQPIKGLRIALSTTLGYADVNPEIEKATREAARVFESLGATVS 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ P + +P A S+L Y G +R ++ E RS+ Sbjct: 298 EVD--------PGFS--NPLAAFSHLF-YSGAANAMR-------DLGERQRSL------M 333 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 ++ + + YL A R + F D+++TP P AF +E Sbjct: 334 DPALVEVATKAEKLSMLDYLGAMNERMAVSERMA-VFHTKYDLLITPCLPIEAFDTNREV 392 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + S FT N+ G PA+SVP L +P+ LQ++G F + + + G Sbjct: 393 PVDWPSTRWPTWTPFTYPFNLTGQPALSVPLGLSSNGLPMALQIVGARFDDARVLAAGHA 452 Query: 480 IEK 482 E+ Sbjct: 453 FEQ 455 >gi|226363898|ref|YP_002781680.1| amidase [Rhodococcus opacus B4] gi|226242387|dbj|BAH52735.1| putative amidase [Rhodococcus opacus B4] Length = 456 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 136/489 (27%), Positives = 211/489 (43%), Gaps = 52/489 (10%) Query: 16 LRSKDISAVELVDSY--------------IQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + D++AVELV +Y + AI + +N+Y V ++A A A +S++ Sbjct: 1 MNPTDMTAVELVTAYSSGELSPVDATQAMLDAITERDRAINSYCLVDEERALAQARKSEE 60 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVML 119 R G ++ L+G+PI IKD F T G T S +D +P +S V +L ++G V L Sbjct: 61 RWNTGYSKGLLDGVPISIKDIFLTDGWPTLRGSQAVDEDQPWDVDSPVAARLREDGMVFL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK E A + +++ G +P D T ++ A C S+GTD Sbjct: 121 GKTTTPEIAWKAVTDSALCGITRNP---ADPTKTAGGSSGGSAAAVAAGLGPC--SVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PASF G VG KPT+GR F P L AG ITRTV D+A+L+ ++ D Sbjct: 176 GGGSVRIPASFCGVVGFKPTHGRIPLFPASPFGP-LAHAGPITRTVEDAALLMDILSLPD 234 Query: 240 ECDATCVNLPVPDYERA-LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D T + P P R + + + G+ V + P + + + L AG Sbjct: 235 PRDPTSLA-PFPTTFRGEIGRDVVGLGVAYSPTLGYVTVDPEVRTIVDRAVQALDAAGLP 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + P + A+ ++ A A++ L + DG R + + E E ++ Sbjct: 294 VTAAD-PGFGDPIDAFELLWAAGAAAMLKNFPDGARDKVDPGLGKVWERGEKFSAV---- 348 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 YL AR + I + F +V+LTPT P AF G Sbjct: 349 --------------------DYLDARAVAADIGITMGK-FHLTHNVLLTPTVPIPAFEAG 387 Query: 418 KE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + S G FT N+ PAIS+P +P+GLQ++G ++ + +V Sbjct: 388 YDVPPGSDLTGWPQWTPFTYPFNLTQQPAISIPVGRTAAGLPVGLQIVGPRHSDDLVLAV 447 Query: 477 GQIIEKEAG 485 + E G Sbjct: 448 ARYAEHVLG 456 >gi|162450535|ref|YP_001612902.1| hypothetical protein sce2263 [Sorangium cellulosum 'So ce 56'] gi|161161117|emb|CAN92422.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 480 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 218/502 (43%), Gaps = 77/502 (15%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIP 75 RS+ S VE + + + +E + +NA+ + ++A AA S+ R G+ L+G+P Sbjct: 19 RSRSASPVEALRAVLAHVERHGAPLNAFALLDEERALEAARASEARWARGEPVGRLDGVP 78 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD T+G T+ S +D P E + +L ++GAV+ GK EF + + Sbjct: 79 VSVKDLLLTRGWPTRRGSRTVDAAGPWTEDAPAVARLREHGAVLFGKTTTSEFGLKGLGD 138 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G + W + TPGGSS G+ AVA ++GTD GGSIR P++F+G V Sbjct: 139 SPLTGITRNAW-----DPRRTPGGSSAGAVTAVAAGFGPLAVGTDGGGSIRVPSAFSGVV 193 Query: 195 GIKPTYGRCSR--LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---------- 242 G KPT+GR ++ P G I RTV D+A+LL ++G D+ D Sbjct: 194 GCKPTFGRVPAHPASVVGVPP---HVGPIARTVGDAALLLSVLSGPDDRDPFRAPPPRED 250 Query: 243 ----ATCVNLPVPDYERALDQS-------IQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 V + P ALD S ++ + VG+ L + ++ Sbjct: 251 ALYLGALVAVDAPGASDALDPSGALDARFLRRVRVGVSATLGYVDLPGDTRACFDAAVAL 310 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L+ GA++ E++ P +A P + + A + R Sbjct: 311 LRRLGAEVEEVAPP---FADPGGVLRTLFAARAA----------------------HTVR 345 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDS-----HYLRARKIRTLIKRDFTEAFEQGVDVILT 406 +G Q R ++ V S+ YL A + R + F + D+++T Sbjct: 346 ELGPEQ----RALLDPAVQSAAAQGEALSAVAYLEAERQRAELALAMA-VFHRRFDLLVT 400 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PT+ A PL + G++ + F++ PAISVP L +PLGLQ++G+ Sbjct: 401 PTS-AGAAPL----IDGGALPPSFAAPFSLTRQ----PAISVPMGLTSAGLPLGLQIVGR 451 Query: 467 PFREETLFSVGQIIEKEAGYFR 488 F E + IE+E+ R Sbjct: 452 HFEEALVLRAALAIERESAPLR 473 >gi|331694898|ref|YP_004331137.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326949587|gb|AEA23284.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 462 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 144/484 (29%), Positives = 212/484 (43%), Gaps = 36/484 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS ++ +E R+ ++S VE ++ I + +NA+ V A AAA ES+ Sbjct: 1 MSSTADLSATELLTAYRTGELSPVEATRDALERISRLDPHVNAFCLVDEAGALAAARESE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G L+G+P IKD T G T+ S D + ++ + GAV++ Sbjct: 61 ERWRRGAPCGVLDGVPTSIKDILLTAGWPTRRGSVTSDPAPGEVDGPPVARVREQGAVLI 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK E A ++ G +PW D T T GGSSGGS+AAV + A S+GTD Sbjct: 121 GKTTTPELAWKGVTDSPLTGVTGNPW---DPT--LTAGGSSGGSAAAVGLGMGALSLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA FTGTV KPTYGR F +L G +TRTV D+A+LL I+G+D Sbjct: 176 GGGSVRIPAGFTGTVAHKPTYGRVPHHPASPFG-TLAHVGPMTRTVADAALLLDVISGFD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + PV A + G+ V + SPT+ A Sbjct: 235 VRDPWALPTPVRRCVDAQGDGVSGLRVAV---------SPTLGHVDVDAEVRAAVEAAAG 285 Query: 300 VEISLPHT-QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 V SL T +Y P + P EA ++ + + + + L+ +R Sbjct: 286 VFASLGATVEYVDPGF--ADPVEA------FETLWFTGAAKSMEALDAAARSR------- 330 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ + YL A +R + E F Q DV+LTPT P +AF G+ Sbjct: 331 -MDPGLVDIATQGEKVSAVEYLTAMAVRNDLGSLMNE-FHQRHDVLLTPTLPIAAFRAGQ 388 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E + G + FT NM PA SVP +P+GLQ++G + + + Sbjct: 389 ESPD-GRRWTTWTP-FTYPFNMTQQPAASVPCGFTAAGLPIGLQIVGPRHADARVLTAAY 446 Query: 479 IIEK 482 E+ Sbjct: 447 AFEQ 450 >gi|312213737|emb|CBX93739.1| similar to amidase [Leptosphaeria maculans] Length = 542 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 129/448 (28%), Positives = 201/448 (44%), Gaps = 39/448 (8%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N + L G I +KD A GI + + + P ++TV + D G ++G Sbjct: 97 NSEGELLRGKTICLKDNIAVAGIPQFFGTDAIHPWTPDSDATVVTRALDAGGDIVGTTIC 156 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + F +S+ TS G + +P+ + ++ GGS+ G A V G L +IG D GGSI Sbjct: 157 ENFCNSTSSFTSAQGTIHNPYAA-----GYSAGGSTSGGCALVGGGLVDIAIGADQGGSI 211 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P++F G VG+KPT+G GI S D AG I RTVRD A+ L AI+G D+ D Sbjct: 212 RVPSAFCGCVGLKPTHGLVPYTGISSGDAIDDHAGPIGRTVRDVALTLDAISGRDDYDDR 271 Query: 245 CVNLP---VPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + P + Y L S+ GM +GI E + L+ + + Q + A + Sbjct: 272 TLGAPTHGLIKYSEQLQASVAGMKIGILTEGFEHRLLNDDVKEVVLQAAEAFQVLSATVE 331 Query: 301 EISLP-HTQYALPAYYIISPAEASSN--LARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 E+SLP H Q PA + I A + + G R L + + + + Sbjct: 332 EVSLPLHLQG--PAIWTIQQRIAGTLGIMGLAHGRRGLLSTAFEAARQPWTDDSFQKLFP 389 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA---- 413 K+ I+ G ++ + Y Y + I + RD E Q D+I+ PTTP A Sbjct: 390 STKNTIINGLSLM--KNYPGLYAKTINIAQRL-RDEYEKLLQIYDIIVMPTTPCVAPRNA 446 Query: 414 -FPLGKEENNS--GSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------KMPLGLQLI 464 + G ++ SMG N T ++ G PA+++P ++P+G+QL+ Sbjct: 447 DWKRGDAPMDALKPSMGLTIN---TAVFDVTGHPAMTIPVGFAPSSEDPNVRLPVGMQLV 503 Query: 465 GQPFREETLFSVGQIIEKEAGYFRPHKW 492 G ++E+ L + G EK H W Sbjct: 504 GGLWQEQKLLNAGLAWEKA------HSW 525 >gi|111020200|ref|YP_703172.1| amidase [Rhodococcus jostii RHA1] gi|110819730|gb|ABG95014.1| probable amidase [Rhodococcus jostii RHA1] Length = 467 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 132/497 (26%), Positives = 231/497 (46%), Gaps = 44/497 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 + +++ E R + +K +S VE+ ++ + +++ +NA++ A AA ++ + Sbjct: 4 DFSYLTAFELRQLISTKQVSPVEVTEAALTRMDDLEPTLNAFVTATPDVALKAARAAEAQ 63 Query: 63 II-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ G L GIP+ +KD +G+ T S ++ +++ G+ +LGK Sbjct: 64 VLAGGQLGKLHGIPLSVKDLIDVEGVRTTFGSKTRADNVARADAPSVERIKSAGSCILGK 123 Query: 122 LNMDEF-AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 EF A ++ G +PW +TDK +PGGSS G++A+VA + ++GTD Sbjct: 124 TTTTEFGAKAGGGDSPLTGVTRNPW----NTDK-SPGGSSSGAAASVAAGVTPFALGTDG 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ G VG+K YGR S PSL G I R+VRD+A+L++ ++G+D Sbjct: 179 GGSVRIPAALCGLVGVKAQYGRVPVFP-TSATPSLGHVGAIARSVRDAALLIEVMSGFDA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI- 299 D + V VPD A + M V +S + + + + L++AG + Sbjct: 238 RDPSSVAQDVPDLVGACGRGTTNMRVAWSPTLGYASVSDEVRELCESAVGRLEEAGCHVD 297 Query: 300 -VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 ++ LP L EA Y GV LR E +++R + + Sbjct: 298 LIDEVLPDDPIGL--------WEAEF----YAGVGLKLR-------EELDHSRHL-LDPD 337 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG- 417 V I Y + Y + + + ++R +++ F+ DV++TPT P + G Sbjct: 338 VAEAITQALYRETLADYFAKFFQRFELREHVRQFFSR-----YDVLVTPTLPVAELGAGI 392 Query: 418 ---KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E + G + Y +T N+ G PA S+P MP+GLQ++ R+ LF Sbjct: 393 NVPPELPDRGLVSWAY---YTYPFNLTGNPAASIPCGFTTSGMPVGLQVVTGTNRDADLF 449 Query: 475 SVGQIIEKEA--GYFRP 489 + +E+ + G+ RP Sbjct: 450 RIAGTLEEASPWGHLRP 466 >gi|229132932|ref|ZP_04261775.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-ST196] gi|228650514|gb|EEL06506.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-ST196] Length = 493 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 76/510 (14%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQKEMEAGKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + +KL + GA++LGK Sbjct: 75 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVKKLREAGAIILGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFEMWAGYSARGGQTINPYGT--GKDDMFVGGSSTGSAVAVAANFTVLSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY LD + ++G +G+ PK+Y Y + D K +++ Sbjct: 253 VDEKDVATHKSEGMAYQDYTSYLDANGLKGAKIGVYSNAPKDY---YENGEYDEKLFEET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L+ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 310 IQVLRSEGATVVEDIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 363 Query: 342 DILEMYENT--RSIGFGQEVKHR------IMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 +++E +N R++ +GQ R + L++R D ++ + + I DF Sbjct: 364 ELMEFNKNIAERALKYGQTKLERRKDFPNTLRNPEYLNARLEDIYFSQKQGI------DF 417 Query: 394 TEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 A E+ +D IL P+ + + AG P+I++PA Sbjct: 418 --ALEKYNLDAILFPSY-----------------------IGSTICAKAGYPSIAMPAGY 452 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + P G+ L F E L + E+ Sbjct: 453 MDNGRPFGITLASAAFSEGALIKLAYAFEQ 482 >gi|146337976|ref|YP_001203024.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp. ORS278] gi|146190782|emb|CAL74787.1| Putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Bradyrhizobium sp. ORS278] Length = 452 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 138/500 (27%), Positives = 205/500 (41%), Gaps = 77/500 (15%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 M E + ++ SA E+ + + I+ + + +NA + + ++ RA A+ D R+ Sbjct: 1 MMRADEIAGTVLARQRSAREMAERALTRIDAARA-LNAVVTIDPERTRAEADAVDARVAA 59 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G+A L G+P+ IKD G S + GF+ ++ +L GAV++G Sbjct: 60 GEALPLAGVPVVIKDNIWVGGWRITQGSKLFAGFKAPEDAIAVARLRHAGAVIVGIGATS 119 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA + YGP P TPGGSSGG + AVA L +IGTD GGS R Sbjct: 120 EFACKGVTTSLLYGPTRHP-----HNPDLTPGGSSGGPAVAVAAGLVPLAIGTDAGGSSR 174 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG-------IITRTVRDSAILLKAIAGY 238 +P + G VG KP+Y G + + P +AG I V D+ + +A+AG Sbjct: 175 RPPAHVGVVGFKPSY------GAVPYGPGFAEAGWGISVVAPIAAHVEDARLAFEAMAGI 228 Query: 239 DECDATCVNLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGIS----- 290 D D +LP D + L + G+ V + E L ID+ G+ Sbjct: 229 DPRDPATFDLPKGDASQPLRMAFSPRLGLDVAVDDEVG-SGLQRAIDRLRAGGMPIADAD 287 Query: 291 --WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 W D V +P L A + + R+D ++ DI + E Sbjct: 288 PIWPPDLAEDAV---MPLQHAGLAALF--------GDAFRHDATQF-----DPDIAKQIE 331 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 +G G +V H + + + AF VDV+L PT Sbjct: 332 RGLGLG-GADVAHALQASARIARA---------------------FAAFFLDVDVLLAPT 369 Query: 409 TPTSAFPLGK------EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 P A+PL + + GH VFT N AG+PAIS+P K +P GLQ Sbjct: 370 VPCVAWPLTQLGPTMIGGRPASPRGHA---VFTPFANHAGVPAISIPCGRDAKGLPFGLQ 426 Query: 463 LIGQPFREETLFSVGQIIEK 482 LI R+ L V E+ Sbjct: 427 LIAARGRDRLLLDVAAQTER 446 >gi|311746953|ref|ZP_07720738.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Algoriphagus sp. PR1] gi|126578647|gb|EAZ82811.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Algoriphagus sp. PR1] Length = 552 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 128/498 (25%), Positives = 219/498 (43%), Gaps = 69/498 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 E+ F + + +++K +++ EL +I I+ + ++ + I + A A ++D Sbjct: 110 FEEIAFYTIPQLASLIKNKKVTSAELTRLFIDRIKRFDGELESVITLTEDLAMFQANKAD 169 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I G+ + L GIP G+KD A +G T + + +TV KL + GAV++ Sbjct: 170 EEIAAGNYKGILHGIPYGVKDLMAVEGYPTTWGAEPYKSQMIDHTATVVNKLEEQGAVLI 229 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 KL A G + + G +PW D T + GSS GS +A + L ++GT+ Sbjct: 230 AKLVSGSLARG---DVWFGGKTKNPW---DVTQGAS--GSSAGSGSATSAGLVPFALGTE 281 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ G G++PTYGR SR G++S + S+D+ G + R D I+ +AI G D Sbjct: 282 TLGSITSPATRNGVTGLRPTYGRVSRYGVMSLSWSMDKIGPLARNAEDCEIVFQAIYGKD 341 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK-------TWQQGISWL 292 + D + +P + + PKE ++ YL +DK + +S Sbjct: 342 DKDPSTNEIPFNQFSNS------------PKELKVAYLKKDLDKDTTITGDNLRASLSVF 389 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 K+ G + I LP + A+ II +EA + VR G E ++E + +R+ Sbjct: 390 KEMGVEPDSIELPE-DFPYAAFDIILRSEAGAFFDEL--VRSG---EVDLMVEQHGGSRA 443 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 Q R + YL+A ++R + E F++ DVI+ P+ Sbjct: 444 NSLRQ---ARFIPAV----------EYLQANRVRRELIEKLYELFKE-YDVIIAPS---- 485 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 Y + N+ G P +SVP +K P LIG + E + Sbjct: 486 -----------------YRSRQLLITNLTGHPVVSVPNGFDKKGRPTSFTLIGNLYDEGS 528 Query: 473 LFSVGQIIEKEAGYFRPH 490 + ++ + +K + H Sbjct: 529 ILALAKAFQKATDFDEKH 546 >gi|297160235|gb|ADI09947.1| putative amidase [Streptomyces bingchenggensis BCW-1] Length = 472 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 137/472 (29%), Positives = 214/472 (45%), Gaps = 39/472 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ + + +R S D+S VE + ++ IE ++NA+ V A+ A AEES Sbjct: 1 MTDIHDLTAVQLLERYASGDLSPVEATRAALERIEQIQPEVNAFSRVDAEAALQQAEESA 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHIL--DGFRPHYESTVTQKLWDNGAV 117 +R G+ L +G+P+ +KD +G T S + DG ++ +L ++GAV Sbjct: 61 ERWRRGEPAGLVDGVPVSVKDILLQRGGPTLRGSLTVAPDGQAWDEDAPSVARLREHGAV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGK EF ++ YG +P+ + T GGSSGGS+AAVA S+G Sbjct: 121 FLGKTTTPEFGWKGVTDSPVYGVTGNPYDP-----RRTAGGSSGGSAAAVALGAGPLSLG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TD GGS+R PASF G +KPTYGR +F +L G +TR D+A+L+ I+G Sbjct: 176 TDGGGSVRIPASFCGIFALKPTYGRVPLYPASAFG-TLAHVGPMTRDAADAALLMDVISG 234 Query: 238 YDECDATCVNLPVPDYERALDQ---SIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLK 293 D D + + P ++ A+ + G+ V P + P + ++ + L Sbjct: 235 ADWRDWSQLAPPEGSFQEAITAGGGGVDGLRVAYSPALGGSATVDPEVAAAVRRAVDLLA 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 D GA + EI P I P EA L + G ++ G+D E+ + Sbjct: 295 DLGASVEEID--------PG--IEDPVEAFHTL-WFSGAARVVQPLGQDKWELLDPGLRD 343 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Q + + HYL A +R + + F D+++TPT P +A Sbjct: 344 ICAQGAAYSAL-------------HYLAAVDVRMALGKAMGR-FHSAYDLLVTPTLPITA 389 Query: 414 FPLGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 F G E S FT NM PA S+P L +P+G+QL+ Sbjct: 390 FEAGAEVPKGSDHTRWTGWTPFTYPFNMTQQPAASLPCGLSADGLPIGVQLV 441 >gi|302925116|ref|XP_003054035.1| hypothetical protein NECHADRAFT_30636 [Nectria haematococca mpVI 77-13-4] gi|256734976|gb|EEU48322.1| hypothetical protein NECHADRAFT_30636 [Nectria haematococca mpVI 77-13-4] Length = 564 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 211/471 (44%), Gaps = 51/471 (10%) Query: 53 RAAAEESD-------KRIINGD---ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 RA AEE + K +I G A +L+G + +KDC A G+ S + P Sbjct: 75 RATAEEQEFGNEWAHKFLIQGKSEGAGNLKGKTVCLKDCIAVAGVPQFFGSDAFPAWTPK 134 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 ++TV ++ D GA ++G + F +S+ TS G V +P + ++ GGS+ G Sbjct: 135 TDATVVTRVLDQGADIVGTSVCENFCNSTSSFTSAQGIVENP-----HSRGYSAGGSTSG 189 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 +A V+ +IG+D GGSIR P++ G VG+KPT+G GI S D AG +T Sbjct: 190 GAALVSSGRVDCAIGSDQGGSIRVPSALCGCVGLKPTHGLVPWTGITSGDAIDDHAGPLT 249 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ-----SIQGMTVGIPKE-YRLDY 276 R+V D+A+ L A+AGYD D + D S+ G+ +GI +E + Sbjct: 250 RSVLDAAMFLDAMAGYDGIDDRALGAGAHGSHGFADSLSSEPSLAGVKIGILREGFDQPI 309 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 + ++ + + GA + E+S+P + I + N+ R GL Sbjct: 310 VQSSVRDVVISAVEKFEKLGATVQEVSVPSHLEGPSIWTIQQRIAGAMNIIGQAHGRRGL 369 Query: 337 RVEGKDILEMYENTR----SIGFGQ---EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 L +E+ R S F + K+ ++ G Y+ + + Y + + I Sbjct: 370 ------YLTDFEHARLPWTSENFAKLFPSTKNTVINGLYL--AEKFPGLYGKTMNLSRKI 421 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLP 444 D+ + F Q DV++ PTTP A G E S+G N T N+ G P Sbjct: 422 SDDYEKLF-QDFDVVVMPTTPYVAPKHGDPKGTPRECFEPSIGLTSN---TAVFNVTGHP 477 Query: 445 AISVPAALCEK------KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 A+S+P ++P+G+Q++G ++E+ + VG E+ + P Sbjct: 478 AMSIPVGFAPATEDPTVQLPVGMQIVGGLWQEKKILQVGNAWERAYNWRVP 528 >gi|187479064|ref|YP_787089.1| amidase [Bordetella avium 197N] gi|115423651|emb|CAJ50196.1| putative amidase [Bordetella avium 197N] Length = 459 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 138/475 (29%), Positives = 217/475 (45%), Gaps = 45/475 (9%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 ++RS SA ++++ + + +S NA+ + +AR A D R +G+ L G Sbjct: 10 QIRSGQRSAADVLEDCLARVRADSS--NAFTAITEARARREAASIDARRASGEPLPPLAG 67 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K+ F G+ T A H+ G P ++ + +L GAV++G LNMDE A G + Sbjct: 68 VPYAVKNLFDVAGLVTLAGGHVNAGNAPAQHDGPLIARLQAAGAVLVGTLNMDEHAYGFT 127 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E S+YG +P T + GGSSGGS+AAVA L ++G+DT GSIR PAS G Sbjct: 128 TENSHYGACRNP----HDTQRIA-GGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPASLCG 182 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPTYGR R G F SLD G + + +D A + G D C P+ Sbjct: 183 IFGLKPTYGRLPRSGSFPFVYSLDHLGPLASSAQDLAAAYDVLQGPWHEDPVCAQR-APE 241 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L + + + VGI Y D+ P ++ L GA+ V + LP + A Sbjct: 242 AVFPLG-TPRPLRVGILGGYFHDWSGPQARRSVAMAAEVL---GARDV-VELPDVEAARA 296 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A +II+ AE + + K +++ Y + + V ++ T+V Sbjct: 297 AAFIITGAEGGA-------------LHQKRLIDHYAHYEPYSRDRLVAGSLIPTTWV--- 340 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHI 429 +A+ +R ++ FE+ DV+++ TP A +G E N Sbjct: 341 -------TQAQGVRRRFQQAVLPLFER-FDVLISAATPVPATMIGTETLTLNGQSLPARA 392 Query: 430 YNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIE 481 + T ++ GLP P E +PLG+QLI P+RE+ + Q +E Sbjct: 393 SMGLLTQPISCIGLPVAVAPLWQGEGSSAHLPLGVQLIAPPWREDLCLAAAQALE 447 >gi|298241686|ref|ZP_06965493.1| Amidase [Ktedonobacter racemifer DSM 44963] gi|297554740|gb|EFH88604.1| Amidase [Ktedonobacter racemifer DSM 44963] Length = 529 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 144/520 (27%), Positives = 232/520 (44%), Gaps = 54/520 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEES 59 +L +++E + + S ++A +L + YI+ I+ + Q + + +E+ + A Sbjct: 29 QLEEASIAELQAAMDSGRLTARQLTEDYIERIQQFDQQGPHLRSVLEINPEALEIADALD 88 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 ++R G L GIPI +KD AT + T A S L G RP ++TV KL + GA++ Sbjct: 89 EERRNMGPRGPLHGIPILLKDNIATADQMETTAGSLALLGSRPRRDATVAHKLREAGAIL 148 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+ E+A S+ +S TP GSS GS A+A L AA++GT Sbjct: 149 LGKTNLSEWANFRSDASSSGWSGRGGQTRNPYVLNRTPCGSSSGSGTAIAANLAAAALGT 208 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI P++ + VGIKPT SR G++ A S D G + RTV D+A LL AI G Sbjct: 209 ETDGSILCPSAVSCLVGIKPTVDLTSRAGVVPIAHSQDTVGPMARTVADAAALLSAITGP 268 Query: 239 DECDATCVNLPVP---DYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DE D P P DY + LD + ++G +G+ ++ Y S D ++ I L+ Sbjct: 269 DELDPASHENPHPGAIDYTKFLDDNGLKGARIGVARDVYFGY-SARADAIIEEAIEQLRS 327 Query: 295 AGAKIVE---ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 GA+I++ I + I+ E ++L Y V + + + Sbjct: 328 LGAEIIDPTNIPTARQMSESQSEMIVLLHEFKADLNSYLADLESSPVRSLEEIIAFNKAH 387 Query: 352 SIG----FGQEVKHRIMIGTYVLSSRCY------DSHYLRARKIRTLIKRDFTEAFEQGV 401 + FGQE+ R T L + Y + + R I +++ + + Sbjct: 388 AAKELPYFGQELLLRAQ-ETVGLDAPTYLHALEENHRFSRQEGIDAIME-------QHNL 439 Query: 402 DVILTPTTPTS--------AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 D ++ PT + PLG + +AG PAI+VPA Sbjct: 440 DALIMPTGAPAWCIDVIDGDHPLGGSSQPAA---------------LAGYPAITVPAGFV 484 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 ++P+GL +G+ + E TL + E+ R K+ Sbjct: 485 -FELPVGLTFMGRAYSEATLIRLAYAFEQGTHARRAPKYL 523 >gi|117928809|ref|YP_873360.1| amidase [Acidothermus cellulolyticus 11B] gi|117649272|gb|ABK53374.1| Amidase [Acidothermus cellulolyticus 11B] Length = 476 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 145/499 (29%), Positives = 220/499 (44%), Gaps = 56/499 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++ E +R D+S ELVD Y+ IE N + AY+ V A+ AR+ A ++ Sbjct: 1 MADLHDLSAFEQAAAIRRGDVSPSELVDHYLARIERWNDTLGAYVTVTAELARSQAAAAE 60 Query: 61 KRIINGDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 + + + + + L G+PI IKD G+ T S + P ++ V L G V Sbjct: 61 RTLRSAEPQSLPPLLGVPIAIKDLTDVAGVRTTLGSAVFADRVPSTDAHVVALLRAAGTV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK N EF + E+ P SPW +++ GGSSGGS+ AVA L + G Sbjct: 121 LLGKTNTPEFGLPCYTESDIAPPARSPWDP-----RYSAGGSSGGSAVAVAAGLAPWAQG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 D GGS+R PA+ G VG+K + GR S L G +TRTVRD+A+ L A+A Sbjct: 176 NDGGGSVRIPAAVCGLVGLKVSRGRVSNGPGPGDVSGLAWHGPLTRTVRDAALWLDAVAV 235 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPT-IDK--------TWQQ 287 D P+P + S T P R+ Y +P ID+ +++ Sbjct: 236 PMPGDPYWAP-PLPGGD-----SFVAATDREPGRLRIARYATPVIIDEPVDPECLDAYER 289 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + L D G +V++ P + A+ + + A++ L R G + +R L Sbjct: 290 ISTLLVDLGHDVVDVPGPGDPEVVAAFERVWAVLAAATALPR--GAEWRVRP-----LTR 342 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 + R R Y RA RD A++Q D +LT Sbjct: 343 WLRDR-------------------GRRISGPEYARAVATLHQRTRDIAVAWQQ-FDAVLT 382 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYND----VFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 PT A +G ++ N FT NM G PAI++P A+ +P+G+ Sbjct: 383 PTLAHPAVEVGALRDDEDPAADFENQKRFTPFTSLANMTGQPAITLPVAVSRAGLPIGVM 442 Query: 463 LIGQPFREETLFSVGQIIE 481 L G+ E TL S+ IE Sbjct: 443 LTGRAGDEATLLSLAAQIE 461 >gi|146341319|ref|YP_001206367.1| putative amidase [Bradyrhizobium sp. ORS278] gi|146194125|emb|CAL78144.1| putative amidase [Bradyrhizobium sp. ORS278] Length = 484 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 133/494 (26%), Positives = 224/494 (45%), Gaps = 52/494 (10%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEG 73 +++ K +SA+E+ ++ ++ ++ ++A+ ARAAA D +I G D L G Sbjct: 18 KVKDKTLSAMEVTEAVLRRMDKLEPHIHAFCTPTPDVARAAAAAVDAKIAAGEDPGLLAG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PIGIKD ATK I T S + F P + V ++L GAV++GK N+ EF Sbjct: 78 VPIGIKDLVATKDILTVMGSLLYRDFVPDEDDIVVERLKAAGAVIIGKTNVPEFGYSGVG 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +PW ++D T + GS ++ VA F +IG+D GGSIR P++ G Sbjct: 138 HNPVFPATRNPW-NLDMTSGGSSAGSGASVASGVAPF----AIGSDGGGSIRIPSALCGL 192 Query: 194 VGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 GIK + GR R +S SL+ G ++RTV DSA++LK I G D D Sbjct: 193 YGIKASMGRVPLYPGCRDERYPGVSSWESLEHVGPMSRTVADSALMLKVITGPDPRDRYS 252 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + DY A +SI+G+ + +++ + P + + + + + VE + P Sbjct: 253 IPAADFDYVDATKESIKGLRIAYSEDWGYAPVDPEVRRVVSEAVRVFETDLGCTVERANP 312 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 P ++ I + G+R ++ K++ H + + Sbjct: 313 GWDDPFPHFWTIVAGDTDLT-----GMRRMMKGREKEM---------------SPHLVAL 352 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---GKE--E 420 L + + A+ IR ++ F D+++TPT AFPL G E E Sbjct: 353 ----LQRQWTAEEFTDAKMIRQMVCNRMWR-FMANYDLLITPTLAVPAFPLYMQGPEIIE 407 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + G FT N+ G PA ++PA + +P+G+Q+IG+ + T+ + Sbjct: 408 DKMVTTGDWL--CFTFICNLTGQPAATIPAGFTKTGLPVGMQIIGRHLADRTVLAASGAF 465 Query: 481 EKEAGYFRP--HKW 492 E+ RP H+W Sbjct: 466 EQA----RPWAHQW 475 >gi|313498977|gb|ADR60343.1| Amidase [Pseudomonas putida BIRD-1] Length = 504 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 112/423 (26%), Positives = 206/423 (48%), Gaps = 24/423 (5%) Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++ L G + +KD + G+ + L GF P +++TV +L D G +LGK Sbjct: 80 VMGASTGKLLGKTVALKDNISLAGVPMMNGAAPLAGFVPSFDATVVTRLLDAGVTILGKA 139 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + + + ++ TS PV +P R ST SS GS+A VA ++G D GG Sbjct: 140 TCEHYCLSGASHTSDPAPVHNPLRPGFSTGG-----SSSGSAALVAAGEVDLAVGGDQGG 194 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA++ G G+KPT+G G+++ + D G +T VRD+A++L+ +AG D D Sbjct: 195 SARIPAAWCGIYGMKPTFGLVPYTGVMAIEATFDHVGPMTSNVRDNALMLEVMAGADGLD 254 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V Y L++ ++G+ +GI ++ ++L L + + I+ + GA + E Sbjct: 255 PRQGVPEVDTYGNYLERGVRGLRIGILQQGFQLANLDQRVGDKVRSAIARFEALGAVVEE 314 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-----NTRSIGFG 356 +S+P A + I + + +G G +G + + + T++ Sbjct: 315 VSVPEHTLAGSLWSPIGCEGLTMQMMHGNGA--GFNWKGLYDVALLDRQAGWRTQADALS 372 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +K +++G + L + +Y +A+ I + + +A E+ D+++ PT P A PL Sbjct: 373 PSLKLCMLVGQFGL-EHYHGRYYAKAQNIARFARAGYDKALER-YDLLVMPTVPIIAQPL 430 Query: 417 GK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E+ S ++ + N T A ++ G PA+S+P L + +P+GL L+G+ + E Sbjct: 431 PAPGCSITESVSRALEMLGN---TAAQDITGHPAMSIPCGLVD-GLPVGLMLVGKHYAEG 486 Query: 472 TLF 474 T++ Sbjct: 487 TIY 489 >gi|119490766|ref|ZP_01623098.1| Amidase [Lyngbya sp. PCC 8106] gi|119453750|gb|EAW34908.1| Amidase [Lyngbya sp. PCC 8106] Length = 467 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 135/488 (27%), Positives = 215/488 (44%), Gaps = 44/488 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + +L F + + +RSK +S ELV+ Y+ IE N Q+ Y V+A+ A A A+ Sbjct: 3 LDDLAFSSALKQAQLIRSKQLSPTELVELYLNRIELFNQQLGCYFTVMAETAIAEAQTQT 62 Query: 61 KRIINGDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 +++ D +L G+PI IKD A G+ S +L + V ++ G + Sbjct: 63 EQLATLDPLELPPFFGVPISIKDLNAVAGVRCTYGSRVLMNQEATSDDAVVTRIRQAGFI 122 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK E E + P +PW ++D TPGGSSGG++A+VA LCA + G Sbjct: 123 IIGKTATSEVGSLPYTEPEGFRPARNPW-NLD----HTPGGSSGGAAASVAAGLCAIAHG 177 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GGS+R PA G VG+KP+ GR S + + + G I RTV D+A LL ++G Sbjct: 178 SDGGGSLRGPAFCCGLVGLKPSRGRISHAPVGDYQSGISTNGPIARTVADAAALLDVMSG 237 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIP-KEYRLDYLSPTIDKTWQQGISWLKDAG 296 Y D + P + A I + + K + S + + L+D G Sbjct: 238 YVTGDPYWLPDPEISFLHATQHPIGSLKIAFSTKIPPVGEASEACQDAVKDTVQLLEDMG 297 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++ T P + A+S + KD+L Sbjct: 298 HQVERGCPDFTDLIEPFKAVWQAGVAASGIP-------------KDLL------------ 332 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + ++L YLRA + R F+Q D++L PT SA + Sbjct: 333 ------TPMNQWLLEQTGSAGDYLRAVSQMQGVARRIVAFFDQ-FDILLLPTYMHSAIRV 385 Query: 417 GKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+ E+ S ++ I + N G PAI++P L + +P+G+QLIG+P E TL Sbjct: 386 GEYEHLSPEETIEEIIKWIAPCPPFNATGQPAIAIPTGLSAEGLPIGVQLIGKPADEITL 445 Query: 474 FSVGQIIE 481 ++ +E Sbjct: 446 IAIAAQLE 453 >gi|229017395|ref|ZP_04174298.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH1273] gi|229023571|ref|ZP_04180066.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH1272] gi|228737733|gb|EEL88234.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH1272] gi|228743958|gb|EEL94057.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH1273] Length = 491 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 144/503 (28%), Positives = 224/503 (44%), Gaps = 62/503 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQKEMEAGHLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GA+++GK Sbjct: 73 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAIIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVLSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRSGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY LD + ++G +G+ PK+Y Y S D K +++ Sbjct: 251 VDEKDVATHKSEGMAYQDYTPYLDANGLKGAKIGVFSNAPKDY---YESGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEAS-SNLARYDGVRYGLRVEGKD 342 I L+ GA IVE I +P H +++ +P Y + + S L V L + Sbjct: 308 IQVLRSKGATIVEDIDIPSFHREWSWGVPLYELKHSLDNYLSKLPSTTPVHSML-----E 362 Query: 343 ILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 ++E EN R++ +GQ R + + YL AR D + EQG Sbjct: 363 LIEFNENIAGRALKYGQTKLER----RKDFPNTLRNQEYLNAR------LEDIYFSQEQG 412 Query: 401 VDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 +D L + FP + + + AG P+I++PA + P Sbjct: 413 IDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAMPAGYMDNGRPF 457 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 G+ F E TL + E+ Sbjct: 458 GITFASAAFSEGTLIKLAYAFEQ 480 >gi|156375873|ref|XP_001630303.1| predicted protein [Nematostella vectensis] gi|156217321|gb|EDO38240.1| predicted protein [Nematostella vectensis] Length = 476 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 71/421 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD GI S IL+G+ P ++TV ++ D G +LGK ++F Sbjct: 111 LHGKTVAIKDNIPVAGIPMMNGSRILEGYIPDVDATVVARVLDAGGRILGKSVCEDFCCS 170 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + ++ GPV++P +D+T + GGSS G++A +A ++G D GGSIR PA+ Sbjct: 171 GESYSNATGPVLNP---LDTTR--SAGGSSSGNAALIASGAVDMALGGDQGGSIRIPAAA 225 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA---TCVN 247 G VG+KPTYG I S SLD G + +TVRD+A+LL+AIAG DE Sbjct: 226 CGIVGLKPTYGLVPYTAISSMETSLDHCGPMAKTVRDAALLLEAIAGLDEEGLDPRQPRE 285 Query: 248 LPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +PVP Y L I G+ +G+ KE + P ++ ++ L++ G K H Sbjct: 286 MPVPPVYTEKLTGVISGVRIGLLKEGFSSLIEPDVNVMVRRSAERLQELGLKT------H 339 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T + P + + +ARY Sbjct: 340 TNDSAPTVKL------ARMMARY------------------------------------- 356 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP--TSAFP---LGKEEN 421 L Y Y +++ +R + R + EA + V++ PT P T P + +E Sbjct: 357 ---LKEDYYGFFYSKSQNLRRELTRAYDEALSK-YHVLIMPTVPKRTPKIPDITVSIKEF 412 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + I N T +++G PA+S+ A +P+G+ ++G+ F + + +V E Sbjct: 413 VHTAFLQICN---TAPFDLSGHPALSINAG-SSHGLPVGMMIVGRRFDDAMVLNVAHAYE 468 Query: 482 K 482 K Sbjct: 469 K 469 >gi|294085630|ref|YP_003552390.1| amidase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665205|gb|ADE40306.1| Amidase [Candidatus Puniceispirillum marinum IMCC1322] Length = 454 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 130/463 (28%), Positives = 215/463 (46%), Gaps = 60/463 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLEGI 74 +R +++V+LV + + IE N Q+ A+ + + A A A E D R+ L G+ Sbjct: 11 VRDGQVTSVQLVTACLDKIEAENDQLKAWAHIDREAALARAGEMDYIRLTGRPMGALHGV 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD T+ T+ + ++ G +P +++ V +L D GA+++GK FA + Sbjct: 71 PVGVKDIVDTRAFPTEYGTPVMSGRQPDHDARVIAQLLDAGAIIIGKTVTTPFAFLDPSA 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 T + F+PGGSS GS+AAVA +IG+ T GS+ +PAS+ G Sbjct: 131 TRNPHNI-----------AFSPGGSSSGSAAAVAAGHVPIAIGSQTNGSVIRPASYCGVF 179 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KPT G R G++ + +LDQ G+ + + D+A+L +A YD D P P Sbjct: 180 GFKPTSGILPRTGVLQTSQTLDQLGVFSLYLEDTALLADVLAMYDPADTASYPWPRP--- 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYLS----PTIDKTWQQGISWLKDA-GAKIVEISLPHTQY 309 + G+ +P E +L T+D ++G++ + DA G +I I + Sbjct: 237 ----HMLSGVQEDVPIEPNFVWLEMPYFGTLDDDARKGMNEVIDALGGQIEVIDAEQSFK 292 Query: 310 ALP-AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +P A+ II E S NL + LR + + + + G Sbjct: 293 DMPEAHKIIQDYEISRNL------EWALRDHEDQLFDKFADMLRRG-------------- 332 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 ++ D Y A K RT + F AF + D ILTP++ A K ++ +G Sbjct: 333 ---TKISDEDYQEALKFRTAMIGYFA-AFFKDYDAILTPSSSGQA---TKFDDGTG---- 381 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +F + GLP +++P + MP+G+QL+G REE Sbjct: 382 --DPIFCTYWTLCGLPCVTLPILTSGEGMPVGVQLVGN--REE 420 >gi|264680283|ref|YP_003280193.1| amidase [Comamonas testosteroni CNB-2] gi|262210799|gb|ACY34897.1| Amidase [Comamonas testosteroni CNB-2] Length = 454 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 138/482 (28%), Positives = 214/482 (44%), Gaps = 60/482 (12%) Query: 14 DRLRSKDISAVELVDSYIQAIENS--NSQMNAYIEVVAQKARAAAEESDKRIINGDARD- 70 +RL SAV+L + QA+E++ + ++ ++A A A SD G AR Sbjct: 13 ERLAQGQTSAVQLTE---QALEHAAQGEGPRVFTRLLREQALAEARASDALRAAGLARSP 69 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAM 129 LEG+PI +KD F G T S +L P ++ V Q+L GAV++G NM EFA Sbjct: 70 LEGLPISVKDLFDIAGHPTLGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEFAY 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW+ D PGGSS G++ +V+ + A+IG+DTGGS+R P++ Sbjct: 130 SGLGLNPHYGTPRNPWQR-DIDGGRIPGGSSSGAAISVSDGMALAAIGSDTGGSVRIPSA 188 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R S G++ + +LD G + +VR A L DA P Sbjct: 189 LCGLTGFKPTARRVSMQGVLPLSANLDSIGPLAPSVRCCAAL----------DAVLSGEP 238 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + A S+QG+ + +P +D + + WQ +S L AG +I E +P Sbjct: 239 HGELRAA---SLQGLRLLVPTNVVMDGMDSAVAAAWQHALSLLYAAGVQITEAVVPPF-- 293 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI--GFGQEVKHRIMIGT 367 S LA+ + G E + RS G G+ ++ +GT Sbjct: 294 --------------SELAQINA------KGGFTAAEAWAWHRSHIDGAGRLAEYDPRVGT 333 Query: 368 YVLSSR---CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 +L + D L AR+ + + + +A D++L PT P A P E S Sbjct: 334 RILRGKDISAADYIELLARRQQWIAR---VQAQMADHDLMLMPTVPVIA-PKIAELQASD 389 Query: 425 SMGHIYNDVFT---VAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQI 479 N + +N A+S+P C + + P+GL L G +++ L SV Sbjct: 390 EAYFAANGLMLRNPTLINFLDGCAVSLP---CHRAGEAPVGLSLAGLAGQDQRLLSVALA 446 Query: 480 IE 481 +E Sbjct: 447 VE 448 >gi|147856346|emb|CAN81781.1| hypothetical protein VITISV_019910 [Vitis vinifera] Length = 358 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 117/374 (31%), Positives = 183/374 (48%), Gaps = 50/374 (13%) Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E +G+S YG +P + +++T GGSS G +A VA LC+A++GTD GGS Sbjct: 1 MHELGLGTSGNNPNYGTTRNP----HAPERYT-GGSSSGPAALVASGLCSAALGTDGGGS 55 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R P+S G VG+K TYGR S +G I + +++ G I TV D ++ AI G D Sbjct: 56 VRIPSSLCGVVGLKTTYGRTSMIGSICDSGTVEIIGPIASTVEDVMLVYAAILGSSPADR 115 Query: 244 TCVNLPVPDYERALDQS-----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGA 297 C+ P P L S + + +G ++ D S I + ++ L K+ G Sbjct: 116 ICLK-PAPPCLPNLSSSESLNVMGTLRLGKYTQWFNDVYSTDISDKCEDVLNMLSKNHGC 174 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENTRSIGF 355 K+ EI +P A+ + +E+ S+L YDG I +M +TR+ Sbjct: 175 KVTEIIIPELNEMRNAHIVSIGSESVSSLNPHCYDG----------KISKMTLDTRT--- 221 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT------ 409 + + T+ S Y+ A+ +R + E F+ VD+I+TPTT Sbjct: 222 -----NLALFRTFA------ASDYVAAQCLRRRLMYYHMEIFKN-VDIIVTPTTGMTAPI 269 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 SA G E+N G++ F VA N+ GLPAISVP ++ +P+GLQLIG+P+ Sbjct: 270 ISPSALKFG--ESNLQVGGYLMR--FVVAANLLGLPAISVPVGYDKQGLPIGLQLIGRPW 325 Query: 469 REETLFSVGQIIEK 482 E ++ + +E+ Sbjct: 326 GEASILRLASAVEE 339 >gi|291617142|ref|YP_003519884.1| Hypothetical Protein PANA_1589 [Pantoea ananatis LMG 20103] gi|291152172|gb|ADD76756.1| Hypothetical Protein PANA_1589 [Pantoea ananatis LMG 20103] Length = 469 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 121/480 (25%), Positives = 209/480 (43%), Gaps = 53/480 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R++D+S VE++ +++ I +N +NA + VA A A ++ ++ G+ L G+ Sbjct: 17 IRNRDVSPVEVMQAHLDRIAATNPDVNAVV-TVADDALKQAAAAEAAVMKGEKLGPLHGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD T G+ TQ S I G RP ++T +L G ++L K N+ EF+ ++ Sbjct: 76 PFTVKDSIDTAGVLTQRGSPIFKGRRPDEDATSVARLKKAGGILLAKTNLPEFSYWIESD 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +PW D T TPGGSSGG SAA+A + +GTD S+R PA+ TG Sbjct: 136 NLLSGRSNNPW---DLTR--TPGGSSGGESAAIAAGMSPLGLGTDLAISVRGPAAQTGIT 190 Query: 195 GIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +K T+G GI AP G + R+VRD A+ ++G D DA PV Sbjct: 191 SMKATHGSVPMTGIWPRAPRRFWHVGPMARSVRDIALAFSQLSGPDGHDAFSSAAPV--- 247 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLS--------PTIDKTWQQGISWLKDAGAKIVEISLP 305 G+ + R+ +++ P ++ + LK G + + +P Sbjct: 248 ------HSDGLPFVASRPLRIGWMTGPGFGPVDPDVNAIVKAAAEALKAPGVVVEHVGIP 301 Query: 306 HTQ--YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 + +AL + + E A G+ E+Y+ Sbjct: 302 ALEKDFALDVFNRLHVMEMKPAFAAA--------TAGRQPDEIYK--------------- 338 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-- 421 M T + S Y+ A + ++ F E F + D ++T P A G + Sbjct: 339 MAKTMLSLPDTPMSAYIDAEQAAERLRDGFAEYFSR-YDALITHVLPIPAHKHGVDRFVI 397 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + Y TV +N+ GLP +++P + +P+ +Q++G+ E + + ++E Sbjct: 398 DGQDVDATYLQGATVPLNVTGLPGVALPFGKSREGLPVNVQIVGKWHDEHVILHIASLLE 457 >gi|254383684|ref|ZP_04999033.1| indoleacetamide hydrolase [Streptomyces sp. Mg1] gi|194342578|gb|EDX23544.1| indoleacetamide hydrolase [Streptomyces sp. Mg1] Length = 474 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 141/496 (28%), Positives = 221/496 (44%), Gaps = 50/496 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + +R+ ++SAVELV+S+++ I N ++NA ++ A +AR AA +D+R G Sbjct: 4 MPATAQAEAVRAGEVSAVELVESHLERIAEVNPRINAVTQLFADRARGAAALTDRRRAAG 63 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P +K+ A +G T G ++ +L GAV +G N+ Sbjct: 64 LPLGPLAGVPFTVKESTAVEGTATTFGVERFRGLLAPADAPPVARLRAAGAVPIGHSNIP 123 Query: 126 EFAM-GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + G + +G ++PW TPGGSSGG AAVA + A +G D+GGS+ Sbjct: 124 TLILAGMHTRSELFGDTVNPW-----DPGRTPGGSSGGDGAAVATGMAALGLGNDSGGSV 178 Query: 185 RQPASFTGTVGIKPTYGRCSR----LGIISFAPS---LDQAGIITRTVRDSAILLKAIAG 237 R PA F G G+KPT GR LG P+ L G + RTV D + + +AG Sbjct: 179 RIPAQFCGVAGLKPTSGRFPADHRVLGPDDPGPASQFLVTDGPLARTVADLRLAYEVLAG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D V PVP Y L ++ V P + + P I + L+DAG Sbjct: 239 TDPRDPRAV--PVPAYGEPLPGPVKVAVVADPGGH---GVHPAIRAAVEAAAEALRDAGY 293 Query: 298 KIVEIS-LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYENTRSIG 354 + E+ +P AL AY I+ E + V GL EG D I E T Sbjct: 294 DVREVPDVPRLDEALEAYGRITVTEFAPTWP----VVRGLLGEGGDRYIAMAMERTPPAN 349 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + VK ++GT++ R + + +L A + L+ FTE P P Sbjct: 350 ADELVK---LMGTWLNIRRSW-AEFLDAYPL--LLGPVFTE----------PPVEP---- 389 Query: 415 PLGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G E + + + + G+P+++VP + +P G+Q++G+ FRE+ Sbjct: 390 --GLESRDRAGRDRVATAMRLCTVTSFVGVPSVAVPTGVA-GGLPSGVQIVGRAFREDLC 446 Query: 474 FSVGQIIEKEAGYFRP 489 + + +E G P Sbjct: 447 LAAARAVEDRLGVLTP 462 >gi|311106567|ref|YP_003979420.1| amidase [Achromobacter xylosoxidans A8] gi|310761256|gb|ADP16705.1| amidase family protein 10 [Achromobacter xylosoxidans A8] Length = 449 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 137/473 (28%), Positives = 213/473 (45%), Gaps = 60/473 (12%) Query: 22 SAVELVDSYI-QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 S+VEL + + +A + + AY + A A A A+ SD G R +EG+PI IK Sbjct: 18 SSVELTRAALARAQDVAGEGARAYTRLYADTALAQAQASDTLRAAGIVRSAIEGLPISIK 77 Query: 80 DCFATKGIHTQACSHILDGF-RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F +G T A S +G ++ V ++L GAV++G+ NM EFA +Y Sbjct: 78 DLFDIEGETTMAGSVAREGEPAADADAEVVRRLVAAGAVIIGRTNMTEFAYSGLGINPHY 137 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G ++P+ D PGGSS G++ +VA + AA+IG+DTGGS+R PA+ G G KP Sbjct: 138 GTPLNPY---DRATGRIPGGSSSGAAVSVADGMAAAAIGSDTGGSVRIPAALCGLTGFKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 + R S G++ + +LD G I +VR A L ++G PVP+ Sbjct: 195 SAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGDGG--------PVPEA----- 241 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ--YALPAYYI 316 +++G+ + IP LD + + ++ +S LKDAGA + EI++P A+ A Sbjct: 242 AALRGLRLAIPTTLALDAMDKHVADSFAAAVSRLKDAGALVEEIAIPEFAELAAINAKGG 301 Query: 317 ISPAEA---SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + AEA +L G RY R V RIM G + ++ Sbjct: 302 FTAAEAWAWHRDLIARAGKRYDPR---------------------VVSRIMRGKDMSAAD 340 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 D R + + +R G D ++ PTTP A P + S + N + Sbjct: 341 YLDLLDAREAWVAAVDRR------IAGYDALIMPTTPIVA-PAVADLQASDDAYYAANGL 393 Query: 434 FT---VAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 +N A+S+P C P+GL + G + + S+G +E Sbjct: 394 ILRNPTLINFLDGCALSLP---CHASGTAPVGLMIAGSNGTDRRILSIGLAVE 443 >gi|186472098|ref|YP_001859440.1| amidase [Burkholderia phymatum STM815] gi|184194430|gb|ACC72394.1| Amidase [Burkholderia phymatum STM815] Length = 488 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 138/506 (27%), Positives = 230/506 (45%), Gaps = 52/506 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAE 57 M + ++ + D +R ++++ ++Y A+ S++ +NA+I + AA+ Sbjct: 16 MQRFASLGLAAAADAIRGGEMTS----EAYATALLRQARSHADLNAFITIDGDAVLEAAK 71 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 +DK G L G+PIG+KD + T G+ T L F P ++ + + + GA+ Sbjct: 72 NADKARSAGAEAPLLGVPIGVKDSYLTTGLPTSIGLDRLAHFIPTEDADAVRAIKEAGAL 131 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + GK N+ E + G + YG V +P R+ D SS GS+A+VA + AS+G Sbjct: 132 VFGKNNLVEMSYGLTGHNERYGQVKNP-RAHDRVTGG----SSSGSAASVAAGIVPASLG 186 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 DT GSIR PAS G VG KPT GR R G+ + +LD G+ R+V D +L + + G Sbjct: 187 GDTVGSIRVPASLCGVVGFKPTTGRWPRNGVAPISHTLDTTGVFARSVEDCILLDQVVTG 246 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + PV ER D ++ G + L + ++ +++ + L+DAGA Sbjct: 247 EQAAE------PV---ER--DSNLTGARLAFAPRQFLGLVDSEVENRFREVVRRLQDAGA 295 Query: 298 KIVEISLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSI 353 ++ EI L AL + I E ++ + LR+ +YE + Sbjct: 296 EVFEIDLGEDFNALIQTTTWGIFAHETQGAISEF------LRLHNIPTTFEAIYEGLKP- 348 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTS 412 Q +H ++ G +S +++ R I+R AF +G IL PTTP + Sbjct: 349 QLRQAWEHIVLPGGAGATS--VEAYQTALNVSRPEIQRRLNRAFVTRGALAILQPTTPCT 406 Query: 413 AFPL---------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 A + G+E +N H T++ + GLP IS+PA + +P+GL+L Sbjct: 407 APSIEEQGEFHIAGQEVSNLALANH------TLSASSVGLPGISLPAGMSRAGLPIGLEL 460 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 + L + + IE G P Sbjct: 461 DAPLASDRALLKLARQIEAVLGTQPP 486 >gi|163939897|ref|YP_001644781.1| amidase [Bacillus weihenstephanensis KBAB4] gi|163862094|gb|ABY43153.1| Amidase [Bacillus weihenstephanensis KBAB4] Length = 491 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 76/510 (14%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQKEMEAGKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + +KL + GA++LGK Sbjct: 73 TKGVRGLLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVKKLREAGAIILGKA 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANGMSFEMWAGYSARGGQTINPYGT--GKDDMFVGGSSTGSAVAVAANFTVLSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRSGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY LD + ++G +G+ PK+Y Y + D K +++ Sbjct: 251 VDEKDVATHKSEGMAYQDYTSYLDANGLKGAKIGVYSNAPKDY---YENGEYDEKLFEET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L+ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRSEGATVVEDIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHR------IMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 +++E +N R++ +GQ R + L++R D ++ + + I DF Sbjct: 362 ELMEFNKNIAERALKYGQTKLERRKDFPNTLRNPEYLNARLEDIYFSQKQGI------DF 415 Query: 394 TEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 A E+ +D IL P+ + + AG P+I++PA Sbjct: 416 --ALEKYNLDAILFPSY-----------------------IGSTICAKAGYPSIAMPAGY 450 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + P G+ L F E L + E+ Sbjct: 451 MDNGRPFGITLASAAFSEGALIKLAYAFEQ 480 >gi|330866690|gb|EGH01399.1| amidase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 481 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 135/486 (27%), Positives = 207/486 (42%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 18 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 77 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 78 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 137 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 138 GWTGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 192 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 193 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 251 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPH 306 P + DQ + + +G PT+ D I+ +A + SLP Sbjct: 252 APDESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPV 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG L + GF ++ Sbjct: 303 TVSTLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR----- 351 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S++ S YL+A + R FE D+++ PT P F P G Sbjct: 352 ----SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAG 406 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + G++ FT N+ G PA ++P +P+GLQ++G F + + + Sbjct: 407 QD-GALPWARWTPFTYPFNITGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFCAAV 465 Query: 481 EKEAGY 486 E A + Sbjct: 466 EAIAPW 471 >gi|222106852|ref|YP_002547643.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] gi|221738031|gb|ACM38927.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] Length = 459 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 138/476 (28%), Positives = 206/476 (43%), Gaps = 53/476 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 ++S + +L + AI + Q + + ++A A+ S RI G + L+GI Sbjct: 22 IQSGALDPQDLAHQTLGAIRDYADQ-TIFTRLTPERAMQEAQASALRIRAGCSLGPLDGI 80 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 PI KD F KG+ T A S +LD P ++ V L G V +G++NM EFA Sbjct: 81 PIAWKDLFDLKGVTTTAGSVVLDDQPPASRDADVVAALASAGMVSIGQVNMSEFAFSGLG 140 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +YG +P + PGGSS GS+ AVA L SIGTDTGGS+R P++F G Sbjct: 141 VNPHYG---TPRNPHGVGEARVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAFNGI 197 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG K T GR S G+ + SLD G + RTV+D+ + DA L P Sbjct: 198 VGYKATRGRYSMRGVFPLSKSLDSLGPLCRTVQDAVWV----------DAAMRGLTHPQV 247 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 RA ++ G +P+ D + + ++ I L+ AGA + + P Q L A Sbjct: 248 TRA---ALAGRRFVVPETVFFDGAEDGVVQAFEAAIRRLEQAGAVVRRQAFPIMQQILDA 304 Query: 314 YYIISP---AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 P AEA V + R+ G D M HR+ L Sbjct: 305 LAKHGPLVTAEAY--------VLHRHRLHGPDAARM-------------DHRVATRAR-L 342 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTT----PTSAFPLGKEENNSGS 425 ++Y+ + R + +FT + G D ILTPT P +A + ++ Sbjct: 343 GENISLANYVELVERREQLISEFTS--QIGADEFILTPTVAHVAPLTARLVADDDLFVAI 400 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G + T+ N A+S+P + MP+GLQ+ G +E L + +E Sbjct: 401 NGKTLRN--TMLGNFLDWCAVSLPCGTGDANMPVGLQVSGPARSDEALLGLALSVE 454 >gi|289627440|ref|ZP_06460394.1| amidase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 467 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 135/486 (27%), Positives = 207/486 (42%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 4 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 179 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 237 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPH 306 P + DQ + + +G PT+ D I+ +A + SLP Sbjct: 238 APDESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPV 288 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG L + GF ++ Sbjct: 289 TVSTLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR----- 337 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S++ S YL+A + R FE D+++ PT P F P G Sbjct: 338 ----SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAG 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + G++ FT N+ G PA ++P +P+GLQ++G F + + + Sbjct: 393 QD-GALPWARWTPFTYPFNITGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFCAAV 451 Query: 481 EKEAGY 486 E A + Sbjct: 452 EAIAPW 457 >gi|170695017|ref|ZP_02886166.1| Amidase [Burkholderia graminis C4D1M] gi|170140115|gb|EDT08294.1| Amidase [Burkholderia graminis C4D1M] Length = 462 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 118/394 (29%), Positives = 186/394 (47%), Gaps = 49/394 (12%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIK 79 S+ E V+ I I++ + + + V ++AR A D + +G A + GIP+ IK Sbjct: 36 SSSEQVELCIARIDDPMGEGIRTFTTVWREQARDVAAAQDTLLRSGYRASPIAGIPVSIK 95 Query: 80 DCFATKGIHTQACSHILDGFR-PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D KG T+A + LD ++ V +L +G V++G+ NM FA S++ Sbjct: 96 DLLDVKGEVTRAGALALDDMPVAACDAPVVSRLRSSGVVLIGRTNMTPFAFSVVGLNSHF 155 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW D+ PGGSS G++ +VA + AA+IG+DT GSIR PA+ G VG KP Sbjct: 156 GTPGNPW----DRDRI-PGGSSSGAAVSVADGMVAAAIGSDTVGSIRVPAALCGVVGFKP 210 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T G + +P+LD G + R+V D A + I+G VP LD Sbjct: 211 TQRTVPLSGAVPLSPTLDSIGPLARSVADCAAIHAVISG---------EAAVP-----LD 256 Query: 259 Q-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY--ALPAYY 315 ++G+T G+P+E LD L + + +++ + + +AGA+I ++S + AL Sbjct: 257 MVGVRGLTFGVPREIVLDDLDIEVGRAFERACARISEAGARIEQVSFKALREVDALNGNR 316 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 +I AEA Y R L G D + + R+ G +L+ Sbjct: 317 VIQLAEA------YAWHRELLERRGAD------------YDPHISARVRSGAQILA---- 354 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + YL R + R+F +A G D +L PTT Sbjct: 355 -ADYLSMLSHRRRLMREF-DAATSGFDALLLPTT 386 >gi|170695005|ref|ZP_02886154.1| Amidase [Burkholderia graminis C4D1M] gi|170140103|gb|EDT08282.1| Amidase [Burkholderia graminis C4D1M] Length = 488 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 136/487 (27%), Positives = 230/487 (47%), Gaps = 44/487 (9%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 +RS D+++ +SY A+ +++ +NA+I + AA+++DK G L Sbjct: 31 IRSGDMTS----ESYASALLYQARAHADLNAFIAIDEDALLQAAKDADKARAAGVEAPLL 86 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+GIKD + T G+ T L F P ++ + + D GA++ GK N+ E + G + Sbjct: 87 GVPVGIKDSYLTAGLATSIGLERLAHFVPTEDADAVRAVKDAGALVFGKNNLVEMSYGLT 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +G V +P R+++ SS GS+A+VA + AS+G DT GSIR PAS G Sbjct: 147 GHNERFGQVKNP-RALERVTGG----SSSGSAASVAAGIVPASLGGDTVGSIRVPASLCG 201 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPT GR R G+ + +LD G+ R+V D +L + + G ++ Sbjct: 202 VVGFKPTTGRWPRNGVAPISHTLDTTGVFARSVEDCILLDQVVTGDQTAESV-------- 253 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL- 311 ER + ++ G + L+ + P + + +++ + LKDAGA++ EI L +L Sbjct: 254 -ER--NSNLVGARLAFAPRQFLELVDPEVGERFREVVRQLKDAGAEVFEIDLGEDFNSLI 310 Query: 312 -PAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKH--RIMIG 366 A + I E ++ + LR+ G E+YE G +++ M+ Sbjct: 311 QTATWGIFAHETQGAISDF------LRLHGIPTTFAEIYE-----GLKPQLRQAWEYMVL 359 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGS 425 + + + R I+R +AF +G IL PTTP +A +G++E + Sbjct: 360 PSGPGATSVQDYKVALSVSRPEIQRRLKQAFVSKGAIAILQPTTPCTAPLIGEQEGLRIA 419 Query: 426 MGHIYNDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T+ + GLP IS+PA L +P+GL+L + L S+ + IE+ Sbjct: 420 GQEVSTLALANHTLLASSVGLPGISLPAGLSRAGLPIGLELDAPLGSDRALLSLSRHIER 479 Query: 483 EAGYFRP 489 G P Sbjct: 480 ILGTMPP 486 >gi|85707623|ref|ZP_01038689.1| amidase [Erythrobacter sp. NAP1] gi|85689157|gb|EAQ29160.1| amidase [Erythrobacter sp. NAP1] Length = 509 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 134/470 (28%), Positives = 223/470 (47%), Gaps = 45/470 (9%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 IQA++++ ++NA I+ + A + I L G + +KD T+ T Sbjct: 50 IQALDDNGPELNAVIDYNVEAPVEARRLASTGI-------LRGRSVLVKDNIDTREFATT 102 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE-TSYYGPVISPWRSMD 149 A S L R ++ + L G V+LGK N+ E+A SN+ TS + V R+ Sbjct: 103 AGSLALANNRTGRDAPLIANLRAAGGVVLGKTNLSEWANIRSNDSTSGWSAVEGLTRNPH 162 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + D+ T GSS GS AAVA +IGT+T GSI PAS G VG KP+ G SR ++ Sbjct: 163 AIDRNT-CGSSSGSGAAVAAEFAWGAIGTETNGSITCPASINGVVGFKPSVGIVSRTHVV 221 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-VPDYERAL-DQSIQGMTVG 267 + + D AG +TRTV D+A+LL A+AG DE DA + +P + DY L D S++G+ +G Sbjct: 222 PISSTQDTAGPMTRTVYDAALLLSAMAGEDEADAATIGVPRIADYTAGLGDFSLEGVRIG 281 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNL 326 + +E + + +++ ++ + L DAGA +V+I P+++ ++ ++ E + Sbjct: 282 VMREQVGN--NEQVEEVFEAALKDLSDAGAVLVDIEFEPNSEMYRDSFTVLL-FELREQM 338 Query: 327 ARYDGVRYGLRVEG-------KDILEMYE---NTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 +Y + +EG D++ E +T F Q + Y+ Sbjct: 339 GKY--LASIPEMEGAETPRTLADLIAFNEANADTEMRWFDQGI---FQTAEATTDREAYE 393 Query: 377 SHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTP---TSAFPLGKEENNSGSMGHIYND 432 + RA IR + + + V +++PT S LG + N GS+G Sbjct: 394 T--ARANAIRIAGEETLDKLMADNDVRFLVSPTRGPAWMSDLVLGDQFN--GSIG----- 444 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 F +AG P ++VP E ++P+G+ G + + + VG E+ Sbjct: 445 -FGSPAAIAGYPHLTVPMGHVE-RLPVGISFFGAKWADHDVLKVGAAYER 492 >gi|218529971|ref|YP_002420787.1| amidase [Methylobacterium chloromethanicum CM4] gi|254560814|ref|YP_003067909.1| amidase [Methylobacterium extorquens DM4] gi|218522274|gb|ACK82859.1| amidohydrolase, AtzE family [Methylobacterium chloromethanicum CM4] gi|254268092|emb|CAX23968.1| amidase [Methylobacterium extorquens DM4] Length = 471 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 140/480 (29%), Positives = 218/480 (45%), Gaps = 51/480 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 + A ++V + + I + +N++ E +A++A A A + D GD L G+P +K Sbjct: 24 VGARDVVAAALDRIARIDPAVNSFTERLAERATARAADLDAAQARGDGLGPLAGVPFAVK 83 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 + F G+ T+A S I P ++ + ++L GAV++G L M E+A + E + Sbjct: 84 NLFDVAGLPTRAGSRINREHAPASRDAALIRRLEAAGAVLVGTLGMGEYAYDFTGENIHD 143 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P GGSSGGS AA+A L ++ +DT GSIR PA+F G G+KP Sbjct: 144 GNTRNP-----HALGHMSGGSSGGSGAAIAAGLVPLALASDTNGSIRVPAAFCGCFGLKP 198 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGR SR G F SLD G + R+ RD A+ A+ G D D + P LD Sbjct: 199 TYGRLSRAGSFPFVGSLDHLGPMARSSRDLALAYDAMQGPDPEDPAMASRPAEPAAPDLD 258 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + + + + Y + D ++ + A + +P A A Y+I+ Sbjct: 259 RGVADLRIAVAG----GYFAQGGDPEAFAAVAHVARALGARRSVVIPEAARARAAAYLIT 314 Query: 319 PAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AE A+ +L R +R+ F V+ R++ G + + Sbjct: 315 AAEGAALHLDRL-------------------RSRAGDFDPAVRDRLIAGAMLPA-----P 350 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-------FPL-GKEENNSGSMGHI 429 RA++ R RD A + VDVIL P+TP A F L G E ++G Sbjct: 351 FVERAQRFRRWY-RDAVLALFREVDVILAPSTPARAPRSGQTTFVLDGVELPVRPNIG-- 407 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VFT ++ GLP +VP L + +PLG+Q+I P+ E V +E+E P Sbjct: 408 ---VFTQPISFIGLPVAAVPVWL-DGGLPLGVQVIAAPWNEALCLRVAHHLEREGAVRAP 463 >gi|239820716|ref|YP_002947901.1| Amidase [Variovorax paradoxus S110] gi|239805569|gb|ACS22635.1| Amidase [Variovorax paradoxus S110] Length = 458 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 220/474 (46%), Gaps = 51/474 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F ++E LR+ + S+V L ++ I ++ +++ V ++A AAA +D+ + Sbjct: 12 FAPMAELSRALRTGETSSVILTRECLRRIAAHDAVFKSFLAVYEEEALAAAALADEELRA 71 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L GIP+ +KD +G T A S +L ++ + +++ D G V++GK +M Sbjct: 72 GHDRGPLHGIPLALKDLVNIQGKPTTAGSPLLSANIAQQDAAIVRRIADAGGVIVGKTHM 131 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 +FA+G+ ++ G +P + +TD GGSS GS+ AVA L +IG+DTGGS+ Sbjct: 132 VQFALGAWGTNTHMGTPRNP--AGRATDMLVAGGSSSGSAVAVAAHLVPWAIGSDTGGSV 189 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G VG KPT R G+ + + SLD G++ +V+D+ + +A+A A Sbjct: 190 RVPAAFCGIVGFKPTIDALPREGVYALSESLDSVGLLASSVQDARLCFEALADAPGSGA- 248 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 D R +G+ + L L+P + + Q + L+ AG +V Sbjct: 249 -------DARR---------RIGVLEADELAPLAPAVARCQVQCLQRLEQAGFSLVPFRF 292 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRI 363 P ++LA + + + EG + + + + V+ R+ Sbjct: 293 P------------------ASLAAFKEPTNAIMIAEGAWVNDRFLDDPDAPMDPSVRSRL 334 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENN 422 V + YL+A+ + +++F ++ G+ I P T +A L +++ Sbjct: 335 -----VAARATTAVQYLQAQATASRWQQEFAGDMDRLGLSAIAMPVTAMTAPRLEDVDHD 389 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + FT VN+ L IS+PA + P+GLQL+G+ + L V Sbjct: 390 VAPVH------FTRPVNLLALCGISLPAGEDDDARPIGLQLVGRAGCDHALLGV 437 >gi|319653443|ref|ZP_08007543.1| amidase [Bacillus sp. 2_A_57_CT2] gi|317394927|gb|EFV75665.1| amidase [Bacillus sp. 2_A_57_CT2] Length = 491 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 151/488 (30%), Positives = 231/488 (47%), Gaps = 45/488 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E +++L++ +I++ +LV Y+ I + +++ +E+ AA +R G Sbjct: 19 IDELQEKLQNGEITSKDLVMMYMNRIGQLDENIHSVLELNPDALHIAAALDTEREEQGPR 78 Query: 69 RDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI +KD T + T A S L +S V +L GAV+LGK NM E+ Sbjct: 79 SPLHGIPILLKDNIDTGDKMQTTAGSLALKNHCAQKDSFVASQLRQAGAVILGKTNMTEW 138 Query: 128 AM-----GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 A S +S G ++P+ KF GGSS GS AA+A AA+IGT+T G Sbjct: 139 ANFMTEGMPSGYSSRGGQTLNPY----GPGKFDVGGSSAGSGAAIAANFAAAAIGTETSG 194 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI PAS VGIKPT G SR GII A S D AG + RTV+D+A+LL +A DE D Sbjct: 195 SILSPASQNSLVGIKPTVGLVSRTGIIPIAHSQDTAGPMARTVKDAALLLNVLAVPDEND 254 Query: 243 ---ATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 T +L D+ LD++ ++G +GI +E DYLS + +S LK+ GA+ Sbjct: 255 PITMTNKDLRGKDFTVFLDEAGLEGTRIGIVRETYFDYLSSEKLSVMNKAVSDLKELGAE 314 Query: 299 IV-EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENT--RSIG 354 +V E+ +P T+ + +A N A V L + D++ EN + + Sbjct: 315 VVDEVVIPSTKEEWSRDVLTYEFKADLN-AYLRTVAPHLNIRTLSDVIHFNENNSEKCLK 373 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-A 413 +GQ I+I S + Y+ A +++D + E+G+D ++ + Sbjct: 374 YGQ----SILIEAEETSGNLTEMAYISA------LEKDIYFSGERGIDYVMKEHHLDAIV 423 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 FP NN G+ AG P+I+VPA + P+G+ G + E L Sbjct: 424 FP-----NNYGAG----------IPAKAGYPSITVPAGYTPEGEPVGITFTGLAYSEPLL 468 Query: 474 FSVGQIIE 481 + E Sbjct: 469 IKLAYAFE 476 >gi|94969881|ref|YP_591929.1| amidase [Candidatus Koribacter versatilis Ellin345] gi|94551931|gb|ABF41855.1| Amidase [Candidatus Koribacter versatilis Ellin345] Length = 596 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 127/485 (26%), Positives = 222/485 (45%), Gaps = 37/485 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ F V++ + + +++ L Y+ +E ++ I + A A+ +DK Sbjct: 138 EIAFAPVTKLSRWIEQRKLTSERLTRLYLSRLEKFTPKLKCVITLTTDLAMKQAQAADKE 197 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP G KD T I T + P ++TV ++L D GAV++ K Sbjct: 198 IAAGKYRGPLHGIPWGAKDLLDTAHIRTTYGAEPFRNRVPSADATVVKRLHDAGAVLVAK 257 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L++ A+ N+ + G ++PW + GSS G AA A L +IG++TG Sbjct: 258 LSLGALAL---NDVWFGGQTVNPWLPEEGAS-----GSSAGPGAATAAGLVGFAIGSETG 309 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+ G G++PTYGR +R G ++ SLD+ G +TR+V D+ ++L+ I+G D Sbjct: 310 GSIVAPSMRCGVTGLRPTYGRVARTGAMTLCWSLDKLGPMTRSVEDAVLVLQTISGPDAE 369 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D V + D++ ++ G+ VG + + + +D+ + +K G VE Sbjct: 370 DVASVPSHL-DFDAG--AAVTGLKVGYFPAWMKEAPATDVDRA---ALETVKKLGMAAVE 423 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 +SLP Y + + + A+ G L+++ D + NT F Q Sbjct: 424 VSLPDWNYDCLDTILFAESAAAFEELTLSGAVDALKMQTPD---SWPNT----FRQ---- 472 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + LS+ +++A ++R + + + VD++L P+ L Sbjct: 473 -----SRFLSA----VDFVQADRMRRKVAMEMARVMSE-VDLLLVPSLRDEMLTLTNFTG 522 Query: 422 N-SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + S ++ + +V + A P +P +++P G+ LIG+ F E TL VG + Sbjct: 523 HPSLTLRAGFVEVGEARSDWAPDPKHPLPKFNPPRRVPHGVTLIGRLFDEGTLGRVGIAM 582 Query: 481 EKEAG 485 EK G Sbjct: 583 EKAFG 587 >gi|312218752|emb|CBX98697.1| similar to amidase [Leptosphaeria maculans] Length = 570 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 142/502 (28%), Positives = 230/502 (45%), Gaps = 61/502 (12%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFA 83 E+V S++ IE N + NA I + A A A+ D ++ G A L IPI +KD F Sbjct: 64 EVVSSFLARIEAHNHRTNAIISL-NPNALAIADSLDDQLSAGSATGPLFCIPILLKDNFD 122 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 T+ + T + L +P ++ L + GAV+LGK N+ E A+ + +S G I+ Sbjct: 123 TEDMPTTGGALALAKSQPMEDAPTVAALKEAGAVILGKANLHELALEGISVSSLGGQTIN 182 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P+ DST TPGGSSGG+ A+V+ C GTDT S+R PAS I+PT G Sbjct: 183 PY---DSTR--TPGGSSGGTGASVSSSFCVFGTGTDTVNSLRSPASANSLCSIRPTRGLI 237 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDA-------TCVNLPVPDYE 254 +R G+I + + D G I RT++D A+ L +A GYD D+ +C N+ D+ Sbjct: 238 TRTGVIPISKTHDVIGPIARTIKDVAVALTVMASTGYDAADSATGLVPTSCRNV---DFA 294 Query: 255 RALDQ-SIQGMTVGIPKEYRLDYLSPTI---DKTWQQGISWLKDAGAKIVEISLPHTQYA 310 +L + S++G+ +G+ + SP I + +S L+ G K++ I+ P Sbjct: 295 ASLPKASLEGLRIGLLNGFFNRTDSPEITPVNNVMDVVMSRLEAEGVKLITINEP----- 349 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRV----------EGKDILEMYENTRSIGFGQEV- 359 Y + +A+ ++ R++ R + V + + E+Y G G E Sbjct: 350 ---IYNATTIQAALDVQRFE-YRELMDVYLQRPSLSGDRPRTLKELYSRKSHNGTGGEFV 405 Query: 360 ---KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + T ++SS ++ R IR L +D I+ P Sbjct: 406 VLPSQYEYVNTALISSTSNATYIQRQDGIRHLTIAFLNTFASNNLDAIIYPEQKNLVVKT 465 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFRE 470 G + SG G + + G P ++VPA E +P+G++++G+P+ + Sbjct: 466 GS-ASQSGRNG--------ILAALTGSPVVTVPAGFSEPNDDAPVGVPIGMEILGRPWDD 516 Query: 471 ETLFSVGQIIEKEAGYFRPHKW 492 E L +G IE+ RP KW Sbjct: 517 EKLLGIGYAIEQLLKVRRPPKW 538 >gi|317403033|gb|EFV83570.1| amidase [Achromobacter xylosoxidans C54] Length = 448 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 21/289 (7%) Query: 22 SAVELVDSYI-QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 ++VEL ++ + +A + A+ + A+ A A A SD G R +EG+PI IK Sbjct: 18 TSVELTEAALARAGDPDGEGARAFTRLYAESAMAQARASDTLRAAGIVRSAIEGLPISIK 77 Query: 80 DCFATKGIHTQACSHILDGFRPHYEST--VTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 D F +G T A S +G P ++ V Q+L GAV++G+ NM EFA + Sbjct: 78 DLFDVEGETTMAGSVAREG-EPAADANAEVVQRLIAAGAVIIGRTNMTEFAYSGLGINPH 136 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG ++PW D PGGSS G++ +VA + A IG+DTGGS+R PA+ G G K Sbjct: 137 YGTPLNPW---DRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAALCGLTGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+ R S G++ + +LD G I +VR A L ++G PVP+ Sbjct: 194 PSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGEGG--------PVPEA---- 241 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 ++G+ + +P+ LD + + T+ + ++ LK+AGA + EI++P Sbjct: 242 -LPLRGLRLAVPRTLALDGMDKHVSDTFARAVARLKEAGALVDEIAIPE 289 >gi|111021547|ref|YP_704519.1| putative amidase [Rhodococcus jostii RHA1] gi|110821077|gb|ABG96361.1| probable amidase [Rhodococcus jostii RHA1] Length = 456 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 129/482 (26%), Positives = 205/482 (42%), Gaps = 34/482 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E S ++S VE + + AI + +N+Y V ++A A A +S++R G Sbjct: 6 MTAVELVTAFSSGELSPVEATQAMLDAITERDRTINSYCLVDEERALAQARKSEERWTTG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 ++ L+G+PI IKD F T G T S +D +P +S V +L ++G V LGK Sbjct: 66 YSKGLLDGVPISIKDIFLTDGWPTLRGSQAVDEDQPWDVDSPVAARLREDGMVFLGKTTT 125 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E A + +++ G +P D T ++ A C S+GTD GGS+ Sbjct: 126 PEIAWKAVTDSALCGITRNP---ADPTKTAGGSSGGSAAAVAAGLGPC--SVGTDGGGSV 180 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASF G VG KPT+GR F P L AG +TRTV D+A+L+ ++ D D T Sbjct: 181 RIPASFCGVVGFKPTHGRIPLFPASPFGP-LAHAGPLTRTVEDAALLMDILSLPDPRDPT 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + + + + + G+ V + P + + + L AG + Sbjct: 240 SLAPFATTFRGEIGRDVVGLGVAYSPTLGYVTVDPEVRAIVDRAVQALDAAGLPVTAAD- 298 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A+ ++ A A++ L K+ E + G G+ Sbjct: 299 PGFSDPIEAFELLWAAGAAAML--------------KNFPEGARDKVDPGLGK------- 337 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + + YL AR + I + F +V+LTPT P AF G + Sbjct: 338 --VWERGEKFSAVDYLDARAVAADIGIRMGK-FHLTHNVLLTPTVPIPAFEAGYDVPPGS 394 Query: 425 SMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + FT N+ PAIS+P +P+GLQ+IG ++ + +V + E Sbjct: 395 DLTSWPQWTPFTYPFNLTQQPAISIPVGRTAAGLPVGLQIIGPRHSDDLVLAVARYAEHV 454 Query: 484 AG 485 G Sbjct: 455 LG 456 >gi|296119786|ref|ZP_06838340.1| amidase [Corynebacterium ammoniagenes DSM 20306] gi|295966940|gb|EFG80211.1| amidase [Corynebacterium ammoniagenes DSM 20306] Length = 495 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 135/501 (26%), Positives = 238/501 (47%), Gaps = 48/501 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +SEL+ M+ ++ +++K++S V+ V++ ++ +E N +NA + + A A E + Sbjct: 7 ISELSQMSAAQIARAVKAKELSPVDTVENALREVERRNPAINAVVFSDPEGALKEARELE 66 Query: 61 KRII-NGDARDLEGIPIGIKDCFATKG--IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 K+I+ + + L G+P +KD F K T L R S + G + Sbjct: 67 KKIVADEEVGLLAGVPTLMKDLFGEKPGWPATMGGLSALKDSRSASGSIFPHSMERAGGI 126 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++G N + +GP +P+ + ++ PGGSSGGS+AAVA + A + G Sbjct: 127 VIGATNSPVLGFRGVTDNRLFGPTRNPFNT-----EYNPGGSSGGSAAAVADGMVALAGG 181 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS-LDQAGIITRTVRDSAILLKAIA 236 TD GGSIR P++++GTVG +P+ GR + +F S G ITRTV D+A+ ++A+A Sbjct: 182 TDAGGSIRIPSAWSGTVGFQPSVGRVPMIRPNAFGESTFIYQGPITRTVEDAALGMQAMA 241 Query: 237 GYDECDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 +D D + P D+ ALD+ ++GM +G +++ + + P I T ++ + Sbjct: 242 SFDPRDP--YSFPAANDFLGALDRGVKGMKIGFTQDFGIFPVDPRIQATVEEAARAFTEL 299 Query: 296 GAKI--VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS- 352 GA + V+ L ++ L + A ++ YD + G D+ E+ S Sbjct: 300 GALVEPVDFKLEYSHDELTEMWCNLLA-----ISSYD-ILEEFAASGNDLRELTPQDLSP 353 Query: 353 --IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 + + +V +R M S +L +K+RT + F + F D++++PT Sbjct: 354 VLLEYADKVPNRTM------------SEWLHDQKMRTHVLNRFVDVFAD-YDLVVSPT-- 398 Query: 411 TSAFPL---------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 +A P+ G E N + T N G P+ SVPA L + +P+GL Sbjct: 399 LAAMPVKNEVSGETYGPTEINGEPINSSIGWCMTYLTNFTGNPSASVPAGLVD-GLPVGL 457 Query: 462 QLIGQPFREETLFSVGQIIEK 482 +IG+ +E + + EK Sbjct: 458 MVIGRKAADEDVMAAISAFEK 478 >gi|71082968|ref|YP_265687.1| amidase [Candidatus Pelagibacter ubique HTCC1062] gi|91762608|ref|ZP_01264573.1| amidase [Candidatus Pelagibacter ubique HTCC1002] gi|71062081|gb|AAZ21084.1| amidase [Candidatus Pelagibacter ubique HTCC1062] gi|91718410|gb|EAS85060.1| amidase [Candidatus Pelagibacter ubique HTCC1002] Length = 445 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 210/502 (41%), Gaps = 88/502 (17%) Query: 4 LNFMAVSESR--DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 LN ++ ++ + L+S IS+VE+ + YI+ IE + A+ +K A E+D+ Sbjct: 2 LNIFTLTTNKLVEHLKSGQISSVEVCNQYIERIEKFEKDVKAWEYFDKKKLLEKAAEADE 61 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +G L G+PI +KD T + T+ S + +S V L GA+++G Sbjct: 62 YRKSGKPLGSLHGLPIAVKDIIGTFEMPTECGSPVRKKMPSSQDSEVVNLLKIEGAIVMG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTD 179 K E A P ++ + D TPGGSS GS+A +A + SIG+ Sbjct: 122 KTVTTELAY------------FHPGKTTNPHDNSRTPGGSSSGSAAVIAAHMAPLSIGSQ 169 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI +PAS+ G VG KP+YG SR G++ + LD G+ +TV D A+ K++ D Sbjct: 170 TNGSIIRPASYCGVVGYKPSYGLISRSGVMRQSDKLDHIGVFGKTVEDVALFAKSLIKKD 229 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS----PTIDKTWQQGISWLKDA 295 D + ++ A D+ + G E + + IDK Q+ + Sbjct: 230 LYDPSTIHY-------AADEMLTVCKKGPLYEPKFIFYKTKNWKNIDKESQKSFEFFIKT 282 Query: 296 GAKIVEI-SLPHTQYALPAYY-IISPAEASSNLARY-------------DGVRYGLRVEG 340 K +E+ P +P Y+ II + ++N Y + GL+ Sbjct: 283 FKKNIEVFDTPSYFDDIPKYHKIIHETDMANNFQGYYKKSKKHLSKEMVSAIERGLKYSA 342 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 K+ E +I F + R Y+S + E FE Sbjct: 343 KEYAE------AIDFMK---------------RSYES---------------YKEVFEDY 366 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 V+ TP+SA K ++GS F GLP+IS+P + E +PLG Sbjct: 367 HGVL----TPSSAGVAPKGLKSTGS------PEFCTIWTYMGLPSISLPLLVGENNLPLG 416 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 +QLIG + V +EK Sbjct: 417 IQLIGDKLDDLRFLGVANWLEK 438 >gi|170740382|ref|YP_001769037.1| amidase [Methylobacterium sp. 4-46] gi|168194656|gb|ACA16603.1| amidohydrolase, AtzE family [Methylobacterium sp. 4-46] Length = 461 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 139/481 (28%), Positives = 221/481 (45%), Gaps = 44/481 (9%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 R+ +++ A +V + + I + ++ A+ +V A +A AAAE D R+ G+A L G Sbjct: 12 RVARRELGARAVVAAALDRIAALDPRVGAFTDVTAARALAAAEALDARLDRGEAAGPLAG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K+ G+ T+A S I P + + ++L GA+++G LNM E+A + Sbjct: 72 VPFAVKNLIDVAGLPTRAGSRINRERVPAARDGALVRRLEAAGAILVGALNMGEYAYDFT 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E + GP +P + + G + ++ V ++G+DT GSIR P++F G Sbjct: 132 GENVHDGPSRNPHALAHMSGGSSGGSGAALAAGLVP-----LTLGSDTNGSIRVPSAFCG 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPTYGR +R G F SLD G + R+V D A+ A+ G D D P Sbjct: 187 VFGLKPTYGRLTRAGSFPFVGSLDHLGPMARSVADLALAYDAMQGPDPEDPVATRRPPEP 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L + +G+ V + Y + D + ++ + A + +P A Sbjct: 247 VTPLLGRGAEGLRVAVAG----GYFARGGDPEAFEAVARVARALGADATVEIPEAARARA 302 Query: 313 AYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 A Y+IS AE A+ +L R LR D F V+ R++ G + + Sbjct: 303 AAYLISAAEGAALHLDR-------LRARPGD------------FDPAVRDRLLAGAMIPA 343 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN---NSGSMGH 428 H RA++ R E F GVD IL P TP A P G E + +M Sbjct: 344 -----PHVERAQRFRRWYAGAVAEVF-AGVDAILAPATPCRA-PRGGETVLVLDGVAMPL 396 Query: 429 IYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 N VFT ++ GLP +VP L + +PLG+Q+I P+RE+ + +E +AG Sbjct: 397 RPNLGVFTQPISFVGLPVAAVPVWL-DDGLPLGVQVIAAPWREDVALRIAHALE-QAGVA 454 Query: 488 R 488 R Sbjct: 455 R 455 >gi|28870361|ref|NP_792980.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853608|gb|AAO56675.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 475 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 141/486 (29%), Positives = 212/486 (43%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + I+ N +NA+ +V A+ A A + G Sbjct: 12 VIEAGALVRRGCMTPIRLTELCLSVIKTHNPTLNAFGDVYAEAALEQAWTMTAELQRGKP 71 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L GA++LGK EF Sbjct: 72 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDAVPAQDAPIIRRLKGAGAIILGKTATTEF 131 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW D T T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 132 GWTGASTSRVFGNGRNPW---DPT--LTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIP 186 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D Sbjct: 187 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLSGPDPLDHQA-- 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LP PD E L + Q + K R+ Y D I+ +A + SLP T Sbjct: 244 LPAPD-ESFLARCDQPL-----KPLRIGYCPTLFDTPVDPQIAAAVEAAVANIARSLPVT 297 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L + A + G+ YG LE + GF + ++ Sbjct: 298 VSTLTLDWQDPLATFETLWVAGRGIAYG------KALEQQLDQLDPGFAELIRR------ 345 Query: 368 YVLSSRCYD-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S CY YL+A + R FE D+++ PT P F P G Sbjct: 346 ----SACYGLGDYLQAMQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAG 400 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +S ++ FT N++G PA ++P + +P+GLQ++G F + + + Sbjct: 401 QDS-ALPWARWTPFTYPFNISGNPAANLPCGWSTEGLPIGLQVVGPRFADAHVLQFCAAV 459 Query: 481 EKEAGY 486 E A + Sbjct: 460 EAIAPW 465 >gi|86136666|ref|ZP_01055245.1| amidase [Roseobacter sp. MED193] gi|85827540|gb|EAQ47736.1| amidase [Roseobacter sp. MED193] Length = 471 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 214/481 (44%), Gaps = 65/481 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR----AAAEESDKRIINGDARDL 71 LRS +SAV+L+ S + I+ N Q+NA +VA + R A AE +D+ G L Sbjct: 15 LRSGALSAVQLMQSTLDRIDALNPQLNA---IVALRDRGELMAEAEAADRATTRGA---L 68 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ IKD KG+ + S + F P + +L GA+ +GK N EF +GS Sbjct: 69 HGLPMAIKDLANVKGLASTQGSPLFKEFVPQQDELFVARLRAAGAIFIGKTNTPEFGLGS 128 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 YG +P+ S GGSSGG++ A++ L A + G+D GS+R PA + Sbjct: 129 HTFNPVYGATRNPFDPDRSC-----GGSSGGAAVALSAGLVALADGSDMMGSLRNPAGWN 183 Query: 192 GTVGIKPTYGRC--SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE----CDATC 245 G +PT+G C + F L G + R+ D A+LL + G D A Sbjct: 184 NVYGFRPTWG-CVPAEPSGDLFLHQLSTLGPMARSPDDIALLLDVMPGPDPRQPLARARE 242 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISL 304 LP+PD + M +G ++ + + P I T ++ ++ L G + +S Sbjct: 243 ATLPLPD--------VAPMRIGWLGDWGGAFPMEPGILDTCKEALTHLSAQGHSVEAVSP 294 Query: 305 PHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF-GQEVKHR 362 P + + +I + ++ L D R L+ ++E R + F QE++ Sbjct: 295 PFSAEEIWTSWITLRSFAVAAGLRALDDQRAHLKETA-----IWELDRGLSFSAQEIQ-- 347 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--- 419 +A +R+ +R E F Q D ++ PT F L E Sbjct: 348 ------------------QASDLRSNWQRRAAELF-QNYDALVLPTAQCWPFSLDLEYPR 388 Query: 420 ENNSGSMG--HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E N M H + V T V++ GLP ++VPA +P+GLQ+ ++ +L ++G Sbjct: 389 EINGLEMDSYHRWMQVVT-PVSLLGLPCLAVPAGFGAAGLPMGLQIFAAQGQDRSLLALG 447 Query: 478 Q 478 Q Sbjct: 448 Q 448 >gi|331010895|gb|EGH90951.1| amidase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 481 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 135/486 (27%), Positives = 207/486 (42%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 18 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 77 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 78 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 137 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 138 GWTGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 192 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 193 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 251 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPH 306 P + DQ + + +G PT+ D I+ +A + SLP Sbjct: 252 APDESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPV 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG L + GF ++ Sbjct: 303 TVSTLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR----- 351 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S++ S YL+A + R FE D+++ PT P F P G Sbjct: 352 ----SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAG 406 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + G++ FT N+ G PA ++P +P+GLQ++G F + + + Sbjct: 407 QD-GAVPWARWTPFTYPFNITGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFCAAV 465 Query: 481 EKEAGY 486 E A + Sbjct: 466 EAIAPW 471 >gi|66046289|ref|YP_236130.1| amidase [Pseudomonas syringae pv. syringae B728a] gi|63256996|gb|AAY38092.1| Amidase [Pseudomonas syringae pv. syringae B728a] Length = 467 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 140/485 (28%), Positives = 215/485 (44%), Gaps = 38/485 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + AIE NS +NA+ +V A+ A A + G+ Sbjct: 4 VIEAAKLVREGGLTPIRLTELCLAAIEIHNSTLNAFGDVYAEAALEQAASMTAELQRGEV 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALESVPVQDAPIIRRLKNAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNPWDP-----SLTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITR+VRDSA+L ++G D D Sbjct: 179 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRSVRDSALLFDILSGPDPLDHQA-- 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LP PD E L + Q + K R+ + D ++ DA + SLP T Sbjct: 236 LPAPD-ESFLVRCDQPL-----KPLRIGFCPTLFDTPVDAQVAAAVDAAVGNIARSLPVT 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L + A + G+ YG + K L+ + GF +K Sbjct: 290 VSTLKPDWQDPLATFETLWVAGRGIAYGKALAQK--LDQLDP----GFADLIKR------ 337 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEEN 421 S++ S YL+A + R F+ D++L PT P F P+G Sbjct: 338 ---SAQYSLSDYLQALQQRAAFANQVHALFDD-YDLLLMPTLPILPFAADDVAPVGYAGQ 393 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + G++ FT N+ G PA ++P +P+GLQ++G F + + +E Sbjct: 394 D-GAVPWARWTPFTYPFNITGNPAANLPCGRSSAGLPIGLQVVGPRFADAQVLQFCAAVE 452 Query: 482 KEAGY 486 A + Sbjct: 453 AIAPW 457 >gi|33592887|ref|NP_880531.1| putative amidase [Bordetella pertussis Tohama I] gi|33572535|emb|CAE42113.1| putative amidase [Bordetella pertussis Tohama I] gi|332382300|gb|AEE67147.1| putative amidase [Bordetella pertussis CS] Length = 451 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 124/464 (26%), Positives = 209/464 (45%), Gaps = 45/464 (9%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFA 83 E+ D +++ I++ N + A++ V +AR AA ++ + + G L GIP +KD Sbjct: 29 EVTDVFLRRIQDLNPAIGAFVAVYEDEARHAARQATQALAQGQRLSPLHGIPFAVKDIVD 88 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 G T S G + + + L D G ++LGK + EFA G G + Sbjct: 89 VAGKFTTYGSRTGAGRQAGATAEYVRALLDAGMILLGKTHTVEFAFGGWGTNQRMGTPRN 148 Query: 144 PWRS-MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P R+ + + GS A + F ++GTDTGGSIR P++F G G++P+ GR Sbjct: 149 PLRADVPCATGGSSSGSGAAVGAQMVPF----AVGTDTGGSIRIPSAFCGLTGMRPSMGR 204 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 S G++S + +LD G + RTV D +L + G T + P + ++ Sbjct: 205 HSGAGVMSLSHTLDTIGPLARTVEDVQMLDDLLTG-----KTATDTAQPGSQAV--ARVR 257 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 +G+ L + P + + Q + + GA +VE++LP + A A+ Sbjct: 258 DARIGVLGAQWLGAIEPEVAHAYAQSLRAFEAMGAMLVELALPFDREAF--------AQL 309 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH-YLR 381 +S L +G+++ GK Y + G ++V+ R ++G YD+ Y Sbjct: 310 TSTLIACEGLQFA----GK-----YAHDPLSGMDEDVRARFLVGDQ------YDAEAYAG 354 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND-VFTVAVNM 440 R+ + FT+A GV +L PTTP A PL E + YN V+T Sbjct: 355 LLGRRSAMIDTFTQAMA-GVKALLMPTTPCVAQPLAGLEQSP------YNPAVYTRLPAW 407 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 G A++VP +P LQ++G P + + S+G+ ++ A Sbjct: 408 LGCCALAVPNGTGAHGLPTSLQIVGLPESDRLVMSLGRAYQEYA 451 >gi|33597434|ref|NP_885077.1| putative amidase [Bordetella parapertussis 12822] gi|33602176|ref|NP_889736.1| putative amidase [Bordetella bronchiseptica RB50] gi|33573861|emb|CAE38171.1| putative amidase [Bordetella parapertussis] gi|33576614|emb|CAE33692.1| putative amidase [Bordetella bronchiseptica RB50] Length = 451 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 123/463 (26%), Positives = 208/463 (44%), Gaps = 43/463 (9%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFA 83 E+ D +++ I++ N + A++ V +AR AA ++ + + G L GIP +KD Sbjct: 29 EVTDVFLRRIQDLNPAIGAFVAVYEDEARHAARQATQALAQGQRLSPLHGIPFAVKDIVD 88 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 G T S G + + + L D G ++LGK + EFA G G + Sbjct: 89 VAGRFTTYGSRTGAGRQAGATAEYVRALLDAGMILLGKTHTVEFAFGGWGTNQRMGTPRN 148 Query: 144 PWRS-MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P R+ + + GS A + F ++GTDTGGSIR P++F G G++P+ GR Sbjct: 149 PLRADVPCATGGSSSGSGAAVGAQMVPF----AVGTDTGGSIRIPSAFCGLTGMRPSMGR 204 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 S G++S + +LD G + RTV D +L + G T + P + ++ Sbjct: 205 HSGAGVMSLSHTLDTIGPLARTVEDVQMLDDLLTG-----KTATDTAQPGSQAV--ARVR 257 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 +G+ L + P + + Q + + GA +VE++LP + A A+ Sbjct: 258 DARIGVLGAQWLGAIEPEVAHAYAQSLRAFEAMGATLVELALPFDREAF--------AQL 309 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 +S L +G+++ GK Y + G ++V+ R ++G R + Y Sbjct: 310 TSTLIACEGLQFA----GK-----YVHDPLSGMDEDVRARFLVG-----DRYDAAAYAEL 355 Query: 383 RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND-VFTVAVNMA 441 R+ + FT+A GV +L PTTP A PL E + YN V+T Sbjct: 356 LGRRSAMIDTFTQAMA-GVKALLMPTTPCVAQPLAGLEQSP------YNPAVYTRMPAWL 408 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 G A++VP +P LQ++G P + + S+G+ ++ A Sbjct: 409 GCCALAVPNGSGAHGLPTSLQIVGLPESDRLVMSLGRAYQEYA 451 >gi|312140557|ref|YP_004007893.1| amidase [Rhodococcus equi 103S] gi|311889896|emb|CBH49213.1| putative amidase [Rhodococcus equi 103S] Length = 475 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 136/504 (26%), Positives = 223/504 (44%), Gaps = 69/504 (13%) Query: 10 SESRDRLRS---KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 S +RD R+ +++SA +++ ++ I + N + NA + V A++A AAA+ D+R+ +G Sbjct: 11 STARDIARAITGREVSARAVIEEHLDHIGSCNPRWNAVVTVPAEQALAAADRLDRRLAHG 70 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P +KD AT G+ T A S L G P ++ + GA+++GK N Sbjct: 71 DPVGPLAGVPFTVKDLIATAGVRTTAGSRALAGNVPAADAPAVAAMKRAGAILVGKTNTP 130 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF +G +P + D +PGGSSGG +AA+A + A +GTD GGS+R Sbjct: 131 EFGASGLTHNDLFGYTRNPLGT--EADPRSPGGSSGGEAAALAAGMSAVGLGTDFGGSVR 188 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA--------------GIITRTVRDSAIL 231 PA TG I+PT GR S G + D+ G + RT+ D+A++ Sbjct: 189 WPAHCTGLSSIRPTSGRVSADGQYPGVAAGDRVLANPATVHGVVQTIGPLARTLDDAALV 248 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L+ + S + P++ +D L D TW G Sbjct: 249 LRVV------------------------SSRRFRWADPEDVEVDGL----DITWAGGDGT 280 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENT 350 + + ++ T L A A S LAR + + LR E +E Y Sbjct: 281 VPVEAGIVAAVA--ETAGGLGARRY-----AGSALARANDLFGRLRATETAADIEAYGAP 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTT 409 FG ++ + + S R + + RAR L+ E G DV++ P Sbjct: 334 SD--FGANIRAVLAAASERRSHRDVEELWAQRARLTAGLLD-------EMG-DVLVLPVA 383 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +A PLG + + D A+++ GLP++ VP A +P+G+Q+I +P Sbjct: 384 SITAPPLGLDTFTVDGHSLTWQDALACCRAISVTGLPSVVVPVATAADGLPIGVQVIARP 443 Query: 468 FREETLFSVGQIIEKEAGYFRPHK 491 ++E +V + + + Y PH+ Sbjct: 444 WQEHVALAVAHRVRRTSTYRSPHE 467 >gi|229150321|ref|ZP_04278539.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus m1550] gi|228633130|gb|EEK89741.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus m1550] Length = 491 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 143/504 (28%), Positives = 226/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|229096598|ref|ZP_04227569.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock3-29] gi|228686804|gb|EEL40711.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock3-29] Length = 491 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 143/513 (27%), Positives = 225/513 (43%), Gaps = 82/513 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + +S+ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEEGTLSSKELVMYYLHRIAQYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + TD GGSS G++ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GTDDMFVGGSSTGAAIAVAANFTVLSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA + VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQSSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY LD ++G +G+ PK+Y Y + D+ ++ Sbjct: 251 VDEKDVATHKSKGMAYEDYTSYLDVNGLKGAKIGVYSNAPKDY---YENGEYDENLFEDT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYI-------------ISPAEASSNLARYD 330 I L+ GA +VE I +P H +++ +P Y + P + S L ++ Sbjct: 308 IQVLRSEGATVVENIDIPSFHREWSWGVPLYELKHSLDNYFSKLPSTIPVHSISELMAFN 367 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 K+I E R++ +GQ + G + + YL AR Sbjct: 368 ----------KNIAE-----RALKYGQTK----LEGRKDYPNTLRNPEYLHAR------L 402 Query: 391 RDFTEAFEQGVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 D + +QG+D L + FP + + + AG P+I++P Sbjct: 403 EDIYFSQKQGIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIP 447 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A E P G+ + FRE L + +E+ Sbjct: 448 AGYMENGRPFGITIASTAFREGILIKLAYALEQ 480 >gi|229542745|ref|ZP_04431805.1| Amidase [Bacillus coagulans 36D1] gi|229327165|gb|EEN92840.1| Amidase [Bacillus coagulans 36D1] Length = 489 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 135/494 (27%), Positives = 229/494 (46%), Gaps = 63/494 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R+K IS+ E V S ++ IE N ++NA +EV+A+ A AA+ SD+ ++ G D L G+ Sbjct: 33 IRTKQISSREAVMSCLKRIEEVNPKVNALVEVLAEGALRAADASDRSVLKGEDLGPLHGV 92 Query: 75 PIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQ------KLWDNGAVMLGKLNMDEF 127 P+ K I+T H+ DG + T L GAV +G+ N+ F Sbjct: 93 PVATK-------INTDQAGHVTTDGVVAFQHNVATDDSPPVAHLRKAGAVFVGRSNVPSF 145 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G ++PW D T TPGGSSGG+++AVA + + G D GGSIR P Sbjct: 146 SLRWVSNNDLHGSTLNPW---DPTR--TPGGSSGGAASAVACGMAPIAQGNDIGGSIRYP 200 Query: 188 ASFTGTVGIKPTYGRCSR-LGIISFAPSLD-----QAGIITRTVRDSAILLKAIAGYDEC 241 A G GI+PT GR + + + P L G + R V D + L ++ YD Sbjct: 201 AYACGITGIRPTIGRVATGADLPNGDPPLSLQMKVTEGPLARNVADLRLALSVMSAYDPR 260 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D N+P+ L + I+ VG+ ++ + P +++ + ++L DAG + E Sbjct: 261 DPVHANVPL--IGEPLKKPIR---VGLLRDPGVVKPDPAVNQALNEAAAYLNDAGYVVEE 315 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP A +Y++ +D+ +++ + FG E Sbjct: 316 VDLPLFAEAYKLWYLLV---------------------LEDLTDLWPAIKQ--FGDEGAR 352 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT-----EAFEQGVDVILTPTTPTSAFPL 416 + Y +S + + L K RT R T + F + ++L P + AF Sbjct: 353 LNLQYNYEVSRQWWGEVTLE--KYRTGYARRGTLIIALQKFMEQYPILLLPVSAEQAFKQ 410 Query: 417 GKEENNSGSMGHIYNDVF-TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 ++ + S + + +++ + G PAISVP ++ +P G+Q++G+ FRE+T+ Sbjct: 411 NEDIKSIDSNARLMAAQWPMMSIALLGFPAISVPTSVS-GGLPTGVQIVGRRFREDTILD 469 Query: 476 VGQIIEKEAGYFRP 489 +IIE A P Sbjct: 470 AAEIIESRANIQVP 483 >gi|114761131|ref|ZP_01441046.1| Amidase [Pelagibaca bermudensis HTCC2601] gi|114545379|gb|EAU48381.1| Amidase [Roseovarius sp. HTCC2601] Length = 451 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 135/489 (27%), Positives = 209/489 (42%), Gaps = 61/489 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ ++++E + R ++ E ++ + E N ++ A+I + AQ ARAAA+ Sbjct: 4 DIRLLSIAELQARYSDGSLTPSETTEACLSRAEEMNPELGAFISIDAQAARAAAQTPRPG 63 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG---FRPHYESTVTQKLWDNGAVML 119 L G+P+ KD FAT Q ++ G P S + ++ GA+ L Sbjct: 64 A-------LSGVPLAHKDIFATP--DRQPGCGVVRGALPCPPLPPSPLLARMEAAGAIDL 114 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G LNM FA+G++ + G +PW F G SS GS+ AVA L SIGTD Sbjct: 115 GPLNMAGFALGTTGANALVGDARNPW-----DPAFCTGASSSGSAVAVAAGLAFGSIGTD 169 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 +G S+R PA+ G VG P +G G + S D+ G++ R V D+A+L G Sbjct: 170 SGASVRVPAALCGIVGYMPEHGALDGTGCFPLSWSADRPGVLARNVADAALLTAVARG-- 227 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 P P +++ + +G+P+ Y + LSP + + I ++ G I Sbjct: 228 -------QTPAP-----VERPAGPLRIGLPESYYTEGLSPAMADAFSAAIRHIEQCGHSI 275 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V + + T + R +R E + ++ + V Sbjct: 276 VPVPVVETTEMRSLH------------------RALMRTETAAVHRAMMSSHPALYELSV 317 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + I G +L+ D+ LR R + R T A DV+LTPTT + A L + Sbjct: 318 RKFITGGEGILAVDYVDA--LRLRAVMQAEARQLTYAH---CDVLLTPTTRSPA--LRYD 370 Query: 420 ENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 S + V FT + GLPAISVP L +PLG+QLI RE TL Sbjct: 371 AIADTSRAETWAQVTGLAHFTQPASYLGLPAISVPFTLSPDGLPLGVQLIAPAEREATLL 430 Query: 475 SVGQIIEKE 483 S E+ Sbjct: 431 SAALDFERH 439 >gi|242084924|ref|XP_002442887.1| hypothetical protein SORBIDRAFT_08g004400 [Sorghum bicolor] gi|241943580|gb|EES16725.1| hypothetical protein SORBIDRAFT_08g004400 [Sorghum bicolor] Length = 615 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 134/500 (26%), Positives = 221/500 (44%), Gaps = 54/500 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNS-------QMNAYIEVVAQKARAAAEESDK 61 V + D RS + + V++ ++ A+ S+S M +I AEES Sbjct: 139 VRDFHDAYRSGETTPVQVATRFLAAVRESSSSAGPAGMNMAFFISCDHDDVMRQAEESTL 198 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVML 119 R G L+G+ +G+KD T + L R ++ +L GAV+ Sbjct: 199 RYQRGAPLSALDGVLVGVKDEIDCVPYPTTGGTRWLGAARRCEADAACVAQLRACGAVLA 258 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK NM E G+S ++G +P+ + K G SSG ++ AG LC ++G D Sbjct: 259 GKANMHELGAGTSGINPHHGSTRNPYNA----SKVAGGSSSGSAAVVCAG-LCPVALGVD 313 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG KPT GR S G++ ++ GI+ TV D+ I AI Sbjct: 314 GGGSVRMPAALCGVVGFKPTAGRLSNAGVLPLNWTVGMPGILAGTVEDALIAYSAIVDQS 373 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY---LSPTIDKTWQQGISWLKDAG 296 + L +P SI + + ++ D + DK Q + G Sbjct: 374 QPSYLRPELNLPQLSST--PSIGNIKLAKYGKWFNDSAEDIRSCCDKALQ---ALHAHYG 428 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + V++++P + A+Y+ +E +++LA+Y +N + G Sbjct: 429 WQTVDVTIPEIEEMRLAHYVTIGSECTTSLAKY-----------------LDNLKRSEIG 471 Query: 357 QEVKHRIMIGTY-VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + R+ + Y SSR Y +S LR R++ F + + DVI++P T +A+ Sbjct: 472 WDA--RVALSVYGSFSSRAYLNSQRLRNRQMY------FHKQIFKTADVIVSPMTGVTAY 523 Query: 415 PLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 L + N+G + +I +++A N GLPAI+V +P+GLQ IG+P+ E Sbjct: 524 TLQDDALNTGELDYINGAALVRYSIAGNFLGLPAITVKVGYDRGGLPIGLQFIGRPWSEA 583 Query: 472 TLFSVGQIIEKEA--GYFRP 489 TL V ++ GY +P Sbjct: 584 TLLHVAFATQQACADGYKKP 603 >gi|116620010|ref|YP_822166.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116223172|gb|ABJ81881.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 598 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 227/504 (45%), Gaps = 81/504 (16%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ F +S+ + ++ I++ L Y+ I+ + ++ I + + A A A ++D+ Sbjct: 140 EIAFAPLSQLARWVETRKITSERLTRIYLDRIQRFDPKLGCVITLTPELALAQARQADRE 199 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP G KD T GI T + P ++ V ++L D GAV++ K Sbjct: 200 IAAGHYRGPLHGIPWGGKDLLDTAGIATTYGAEPYRNRIPPEDAAVVKRLHDAGAVLIAK 259 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L++ A+ N+ + G ++PW + GSS G AA A L SIG++TG Sbjct: 260 LSLGALAL---NDIWFGGQTMNPWLLEEGAS-----GSSAGPGAATAAGLVGFSIGSETG 311 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+ G G++PTYGR R G ++ SLD+ G +TR+V DS ++L+AI+G D Sbjct: 312 GSIVSPSMRCGVTGLRPTYGRVPRTGAMTLCWSLDKLGPMTRSVEDSLLVLQAISGPDAG 371 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D V + D++ + + G+ VG + + + +D+ + + AG VE Sbjct: 372 DVASVPSHL-DFDAS--APVAGLRVGYFPGWMKESPATDVDRA---ALETTRKAGMLPVE 425 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEVK 360 +SLP Y + + + A A+ G L+ + D ++ R Sbjct: 426 VSLPDWPYNSLSLILFAEAAAAFEELTLGGHLKELKAQVPDAWPNLFRQAR--------- 476 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 LS+ +++A ++R + ++ F Q VD++L P+ Sbjct: 477 --------FLSA----VDFVQADRMRRSVAQEMARIFSQ-VDLLLVPS------------ 511 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE----------------------KKMP 458 + +++ T+ N +G P++++PA E +++P Sbjct: 512 --------LRDEILTI-TNFSGHPSLTLPAGFVEVGEARSDWAPDPDHPLPTFSPPRRVP 562 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ LIG+ F E TL G +E+ Sbjct: 563 HGVTLIGRLFDEGTLGRAGLALER 586 >gi|83315460|ref|XP_730803.1| Glu-tRNAGln amidotransferase subunit A [Plasmodium yoelii yoelii str. 17XNL] gi|23490639|gb|EAA22368.1| Glu-tRNAGln amidotransferase subunit A, putative [Plasmodium yoelii yoelii] Length = 656 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 134/471 (28%), Positives = 207/471 (43%), Gaps = 75/471 (15%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI +K TKGI T A S IL ++ Y+STV +KL +GA+++GK +DEFAMG Sbjct: 175 LFGLPIVLKXNIITKGIPTTAGSKILSNYKSSYDSTVVKKLKKHGAIIIGKTRLDEFAMG 234 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPAS 189 S G V +P+ +K+ G S G SA+ G + S+ TDTGGSIR PA+ Sbjct: 235 SCT-----GNVKNPF-----NEKYLSCGGSSGGSASCVGSKILNCSVNTDTGGSIRTPAA 284 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-- 247 G +G+KPTYGR SR GII + D G+I V D +ILL ++GYD+ D V+ Sbjct: 285 LCGCIGLKPTYGRISRYGIIPYNEETDVVGLIVNNVYDCSILLDCLSGYDKNDLKSVHTK 344 Query: 248 -LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT----------WQQGISWLKDAG 296 + +QS + K + YLS + K + + +KD G Sbjct: 345 KKKYYFLLKKYEQSEIFKSEKPLKNMKFGYLSKDLLKRYFVDDVVCDHYDMVMKNIKDMG 404 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++ ++ YY+ S A+SN+AR +G+ Y + + + + RS Sbjct: 405 GILINTNIYKLVEYCYIYYMYSMIVANSNIARMNGINYNIPNINNENNFITK-LRSNLID 463 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---QGVDVILTPTTPTS- 412 + V RI+ G+ + S ++ R++ +IK + V+ IL P+ P S Sbjct: 464 ENVLARIIGGSIISSYFEKNNKKRDFRRVFLIIKNKLISRLNKLFKHVNFILLPSLPRSN 523 Query: 413 --------------------AFPLGKE--------------------ENNSGSMGHIYN- 431 L K+ EN++ S ++YN Sbjct: 524 NIKGDCNMDISLSCEKYLKNKINLEKKCLDNMNSDNNDNKNKHNLCIENDNISNKYMYNT 583 Query: 432 ---DVFTVAVNMAGLPAISVPAALCEKKM--PLGLQLIGQPFREETLFSVG 477 ++F V ++ G P+I +P K P QL+ E L V Sbjct: 584 YMREIFLVISSITGFPSIVIPTGEFTKNFNEPQSFQLLNSKLNEHDLLKVA 634 >gi|229029793|ref|ZP_04185864.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH1271] gi|228731508|gb|EEL82419.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH1271] Length = 493 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 142/503 (28%), Positives = 226/503 (44%), Gaps = 62/503 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + E + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHEIQVAMEAGQLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAVFIAEALDYERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GA+++GK Sbjct: 75 IKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAIIIGKT 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S + ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANAMSFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D++ILL ++ G Sbjct: 193 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDASILLGSLTG 252 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY + LD + G +G+ PK+Y Y S D K +++ Sbjct: 253 VDEKDVATHKSEGIAEHDYTKYLDVNGLHGAKIGVYSNAPKDY---YESGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L+ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 310 IEVLRSKGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 363 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 ++++ EN R++ +GQ R + + Y+ AR D + EQ Sbjct: 364 ELMKFNENIAERALKYGQTKLER----RKDFPNTLRNPEYINAR------LEDIYFSQEQ 413 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 G+D L K+ N + Y + + AG P+I++PA + P Sbjct: 414 GIDFAL------------KKYNLDAILFPSY--IGSTICAKAGYPSIAIPAGYMDNGRPF 459 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 G+ L F E L + E+ Sbjct: 460 GITLASTAFSEGILIKLAYAFEQ 482 >gi|114707760|ref|ZP_01440654.1| putative amidase [Fulvimarina pelagi HTCC2506] gi|114536749|gb|EAU39879.1| putative amidase [Fulvimarina pelagi HTCC2506] Length = 448 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 132/476 (27%), Positives = 207/476 (43%), Gaps = 66/476 (13%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPI 76 S +++A L+ + I+ + +NA++ V A A+A DK G R L GIPI Sbjct: 20 SDELTAESLLLECLTRIDEKDGALNAFVTVYRDAALASARRLDKERSAGQVRGPLHGIPI 79 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD +G T S I + Q+L + G V++GK M EFA GS S Sbjct: 80 AIKDLADIEGDITGFGSRIYSTRPAKTTAPFVQQLEEAGMVIVGKTQMVEFAFGSWGTNS 139 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 G +P D + GGSS GS+ AVA + A+IG+DTGGS+R PA+ GTVG+ Sbjct: 140 VLG---APRNPRMPDDYYIAGGSSSGSAVAVAADMVPAAIGSDTGGSVRIPAALCGTVGL 196 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K +YG G+ + +PS D G +T + D+ ++ A+ P+ ER Sbjct: 197 KTSYGSVPVDGVAALSPSFDTIGPLTHHLDDARLIFAAMRR-------------PELER- 242 Query: 257 LDQSIQGMT--VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--TQYALP 312 ++ +G++ + IP L+ + P I +++ ++ L + G + LP Y Sbjct: 243 --ETFKGVSKIIRIPSRSELEPIDPEIYAAFERSLAVLSEIGMADRPLELPRGFADYQTD 300 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI------G 366 I++ EA +L D V N + V+ RI G Sbjct: 301 TGAIMA-WEAYGSLG--DTV----------------NEPDVAIDPAVRTRIRAASAMDEG 341 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY+ S K+ ++ D +VIL PTTP A L + M Sbjct: 342 TYL---ELIASRQAAIAKVEDVLGED---------EVILLPTTPFPACRLSDVDETIFPM 389 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T N L A+S+P A + +P+G Q+ + RE+ SV + ++K Sbjct: 390 SRL-----TRFANYFDLCAVSLPVATTKAGLPIGTQICARRNREDLAISVAKRLQK 440 >gi|71736440|ref|YP_274400.1| amidase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556993|gb|AAZ36204.1| amidase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 464 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 133/487 (27%), Positives = 206/487 (42%), Gaps = 46/487 (9%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR- 69 E+ +R ++ + L + + IE NS +NA+ +V A A A + G R Sbjct: 3 EAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQVRG 62 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 63 PLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEFGW 122 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P S Sbjct: 123 TGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIPGS 177 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G +K T GR S L AG ITRTVRDSA+L ++G D D + P Sbjct: 178 FCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALLAP 236 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQ 308 + DQ + + +G PT+ D I+ +A + SLP T Sbjct: 237 DESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPVTV 287 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 L + A + G+ YG L + GF ++ Sbjct: 288 STLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR------- 334 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 S++ S YL+A + R FE D+++ PT P F ++ G+ Sbjct: 335 --SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPF----AADDVAPAGY 387 Query: 429 IYND---------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + D FT N+ G PA ++P +P+GLQ++G F + + Sbjct: 388 VGQDGAVPWARWTPFTYPFNITGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFCAA 447 Query: 480 IEKEAGY 486 +E A + Sbjct: 448 VEAIAPW 454 >gi|218897063|ref|YP_002445474.1| amidase family protein [Bacillus cereus G9842] gi|218542623|gb|ACK95017.1| amidase family protein [Bacillus cereus G9842] Length = 491 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 222/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGVRGPLHGIPVLVKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S + ++ G I+P+ + D GGSS GS+ AVA SIG Sbjct: 133 NMTELANAMSFKMWAGYSARGGQTINPYGT--RKDGMFVGGSSTGSAIAVAANFTVVSIG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D DY LD + + G +G+ PK+Y Y + D K +++ Sbjct: 251 VDEKDVATRKSEGRAYQDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVEISLPHT-----QYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE H+ + +P Y E +L Y +R + V Sbjct: 308 IQVLRNEGAAVVENIDIHSFHREWSWGVPLY------ELKHSLDNYLSKLRSIIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNMAERALKYGQTK----LEGRKDFPNTLRNPEYLNARL------EDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|282857899|ref|ZP_06267105.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyramidobacter piscolens W5455] gi|282584281|gb|EFB89643.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyramidobacter piscolens W5455] Length = 484 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 135/513 (26%), Positives = 236/513 (46%), Gaps = 56/513 (10%) Query: 1 MSELNFM--AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE 58 M+ +FM V++ + ++ L + Y++ IE S++N+ I V A EE Sbjct: 1 MTSFDFMEATVAKVHAAYLNGSLTCRALCEYYLKRIEQLESRINSIICVNPN----ALEE 56 Query: 59 SDKRIINGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 +D+ R L GIP+ +KD F T + T A S L G+ P ++ VT++L Sbjct: 57 ADRFDTYVKERRRLCGALHGIPVMLKDNFNTTDMPTTAGSVALKGWVPQKDAFVTKRLRK 116 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 +GA++L K N+ EFA+ +S G ++P+ D T TPGGSSGG+ A +A + Sbjct: 117 SGALILAKTNLHEFAIWGETVSSILGQSVNPY---DPTR--TPGGSSGGTGATIAANIGI 171 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 +GTDT S+R PAS VGI+PT G SR GI+ ++ + D AG I RTV D+A L Sbjct: 172 VGLGTDTINSVRSPASANSLVGIRPTIGLVSRAGIVPYSLTQDTAGPICRTVEDAARCLS 231 Query: 234 AIAGYDECDATC---VNLPVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQG 288 IAGYD DA V V DY + LD+ ++ G +G+ + + + ++ + + + Sbjct: 232 VIAGYDPDDAETAWGVGHVVEDYAKYLDENALPGKRIGVLESLFGKEDVNRSTNAVMSEA 291 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY------DGVRYGLR-VEGK 341 + + GA +V + Q L + + + +L Y D + ++ + K Sbjct: 292 MKVFEANGATLVPVRDDIDQSWLTSETSVHLDDFRRDLDSYLRELPTDWPVHSMKEILDK 351 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 + + + ++ +GT + Y+ LR R ++ + + + Sbjct: 352 GLFHPFSES-----NMRDAMKLEVGTPRYLEKMYNKIGLRTRVLKIMA--------DLRL 398 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK----- 456 D ++ P G + V + G P++ VPA + Sbjct: 399 DAMIYPHQQQLVCKCGASQRQRNG----------VLCSSTGFPSVCVPAGFAPDENAPVG 448 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +P+G+++IG+P+ E L S+ E+ + + +P Sbjct: 449 VPVGMEIIGRPWSEALLISIAYAFEQHSHFRKP 481 >gi|293606608|ref|ZP_06688964.1| AtzE family amidohydrolase [Achromobacter piechaudii ATCC 43553] gi|292814993|gb|EFF74118.1| AtzE family amidohydrolase [Achromobacter piechaudii ATCC 43553] Length = 462 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 143/485 (29%), Positives = 220/485 (45%), Gaps = 61/485 (12%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 ++ S + SAV ++DS + + + + N + V +AR A D R G++ L G Sbjct: 11 QVASGERSAVAVLDSTLARVRERDPRYNCFTAVTEARARQEAAAIDARRARGESLPPLAG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K+ F T A + P +++ + ++ + GAV++G LNMDE A G + Sbjct: 71 VPYAVKNLFDITDEVTLAGGRVNAANPPATHDAHLVSRMREAGAVLIGALNMDEHAYGFT 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E ++YGP +P + SSGGS+AAVAG L ++G+DT GSIR PAS G Sbjct: 131 TENTHYGPCHNP-HDLSRIAGG----SSGGSAAAVAGGLVPLTLGSDTNGSIRVPASLCG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G+KPTYGR R G F SLD G + D A A+ G D DA C Sbjct: 186 IFGLKPTYGRLPRTGSFPFVGSLDHLGPFAASASDLAAAYDALQGPDPEDAACA------ 239 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW-----QQGISWLKDAGAKIVEISLPHT 307 + A+D + G+ G + R+ L D+ W ++ + A + LP Sbjct: 240 -QHAVDPVLPGLAAGA-RTLRVAVLGGYFDE-WAGPQAKRAVQIAARALNATAIVDLPGA 296 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A A +II+ AE + R Y D E Y + R++ G+ Sbjct: 297 TQARAAAFIITAAEGGALHRRKLVTHY-------DYYEPYS-----------RDRLVAGS 338 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL--------GKE 419 V ++ +A++IR + R+ F+Q DV++ P TP SA P+ GKE Sbjct: 339 LVPAAWVQ-----QAQRIRHRVYREALALFDQ-YDVLIAPATPVSATPIGTDWLTLAGKE 392 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISV---PAALCEKKMPLGLQLIGQPFREETLFSV 476 SMG + T ++ GLP + P + +PLG+QLIG P+RE + Sbjct: 393 LPARASMG-----LLTQPISCIGLPVCTAPIWPETEQDGHLPLGVQLIGAPWREADCLAA 447 Query: 477 GQIIE 481 +E Sbjct: 448 AHALE 452 >gi|229059767|ref|ZP_04197144.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH603] gi|228719596|gb|EEL71197.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH603] Length = 493 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 227/504 (45%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQKEMEAGKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + +KL + GAV++GK Sbjct: 75 TKGVRGLLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVKKLREAGAVIIGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANAMSFEMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVLSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDASILSPAVQNSVVGIKPTVGLISRSGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY LD + ++G +G+ PK+Y Y + D K +++ Sbjct: 253 VDEKDVATHKSEGMAYQDYTPYLDANGLKGAKIGVYSNAPKDY---YENGEYDEKLFEET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L+ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 310 IQVLRSEGATVVEDIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 363 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ R + + YL+AR D + EQ Sbjct: 364 ELMEFNKNIAERALKYGQTKLER----KKDFPNTLRNPEYLKAR------LEDIYFSQEQ 413 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA + P Sbjct: 414 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAMPAGYMDNGRP 458 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ L F E L + E+ Sbjct: 459 FGITLASAAFSEGALIKLAYAFEQ 482 >gi|254439735|ref|ZP_05053229.1| Amidase, putative [Octadecabacter antarcticus 307] gi|198255181|gb|EDY79495.1| Amidase, putative [Octadecabacter antarcticus 307] Length = 443 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 127/456 (27%), Positives = 208/456 (45%), Gaps = 53/456 (11%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHIL 96 ++ +NA+ + A A A+ +++R G+A ++GIPI IKD + TK T ACS+ Sbjct: 26 HADLNAFAALDAGIVMAQAKAANQRRARGEALSPIDGIPIAIKDNYLTKDYPTTACSNAK 85 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 ++T+ L GAV+ GK NM E+A G++N TS GP +P + D T Sbjct: 86 PLEPTGQDATIVANLRAAGAVIFGKTNMHEWAFGATNTTSNIGPTRNP----HNIDHITG 141 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 G S G +A G + AA G+DTGGSIR P+S G G KP+YGR SR G++ + SLD Sbjct: 142 GSSGGSGAAVAGGIVSAA-FGSDTGGSIRIPSSACGIYGFKPSYGRASRHGVLPLSWSLD 200 Query: 217 QAGIITRTVRDSAILLKAIAGYDECD------ATCVNLPVPDYERALDQSIQGMTVGIPK 270 G + +++D LL + G D D T P P+ + L+ S G+ Sbjct: 201 APGPMATSLQDIVHLLPYVLGADPADHSTSGAGTFNEAPAPNTIKVLNLSGPGL------ 254 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 E D +D+ L + + + SL + L ++ I EASS Sbjct: 255 ERATD-----VDEAINTA---LLRSKTDVTQASLSNIDQYLASWEAILHCEASS------ 300 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 Y + ++ GF + + G + ++ + +RA+ + L+ Sbjct: 301 ---YHQALMAQE---------PAGFSSVTRAHLEAGEQIGATELLVAQKIRAQLMPALMN 348 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV---NMAGLPAIS 447 D + +V++ PT P +A G G D T N+AGLP ++ Sbjct: 349 -DMPD-----WNVLVLPTLPVTAPKHGDGWQEFGGRRVTTQDSMTWFCWLGNLAGLPCLT 402 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +P +P+G+ L+G+P +E L + ++I++ Sbjct: 403 IPVGKSHAGLPIGMMLMGKPSGDEELLAAAKVIDQN 438 >gi|291334371|gb|ADD94029.1| amidase [uncultured marine bacterium MedDCM-OCT-S11-C95] Length = 425 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 130/463 (28%), Positives = 206/463 (44%), Gaps = 65/463 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + ++++ +R+ S+ ELV + ++ I + + A+I + +A A D+ Sbjct: 5 LNELGLNDAAQGIRNGSFSSEELVLACLERIRQRENHVGAWIHLDEDQALEQARGCDRTK 64 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L GIP+GIKD T+ + T S DG +P +S+ L + GAV+LGK Sbjct: 65 PEGP---LHGIPVGIKDILDTRDMPTCYGSPFYDGHQPVNDSSCVSFLRNAGAVILGKTV 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA +T+ +P +FTPGGSS GS+A VA F+ +IGT TGGS Sbjct: 122 TTEFAWRKPGKTA------NP-----HNPEFTPGGSSSGSAAGVADFMVPLAIGTQTGGS 170 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 + +PAS+ G VG KPT+G S G+ + SLD G R+ D I +AI + Sbjct: 171 VIRPASYCGVVGFKPTFGHLSVAGVKPLSHSLDTLGCFVRSAEDLRIFRQAIWNVAGEKS 230 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 N P +G + + + P+ + G +I+++ Sbjct: 231 PDNNFP---------------KIGFCRTPDWEKVGPSTQNALEHARQSWSSQGVEIIDVQ 275 Query: 304 LPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LP AL A+ I EA NL RY+ + + + K + +E + I F + Sbjct: 276 LPEEFSALGDAHGCIMVYEAGQNL-RYE-LTHHQSLLSKRLRSYFE--KPIRFEE----- 326 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 Y A K+ L + E F+ DV+L P+ P A P G Sbjct: 327 ----------------YQEALKMTRLCRNRMQEVFDS-CDVLLAPSAPDEA-PHG----- 363 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + + + VF M LP +++P+ ++P+G+QLIG Sbjct: 364 ---LDYTGDTVFNRMWTMLHLPTLTLPSIRGANQLPVGVQLIG 403 >gi|229011399|ref|ZP_04168590.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus mycoides DSM 2048] gi|228749916|gb|EEL99750.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus mycoides DSM 2048] Length = 493 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 143/510 (28%), Positives = 228/510 (44%), Gaps = 76/510 (14%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQKEMEAGKLTSKELVMYYLHRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + +KL + GA++LGK Sbjct: 75 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVKKLREAGAIILGKA 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANGMSFEMWAGYSARGGQTINPYGT--GKDDMFVGGSSTGSAVAVAANFTVLSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL + G Sbjct: 193 TETDASILSPAVQNSVVGIKPTVGLISRSGIIPFTYSQDTAGPFARTVTDAAILLGNLTG 252 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY LD ++G +G+ PK+Y Y + D K +++ Sbjct: 253 VDEMDVATHKSEGMAYQDYTPYLDVNGLKGAKIGVFNNAPKDY---YENGEYDEKLFEET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L+ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 310 IQVLRSEGATVVEDIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 363 Query: 342 DILEMYENT--RSIGFGQEVKHR------IMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 +++E +N R++ +GQ R + L++R D ++ + + I DF Sbjct: 364 ELMEFNKNIAERALRYGQTKLERRKDFPNTLRNPEYLNARLEDIYFSQKQGI------DF 417 Query: 394 TEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 A E+ +D IL P+ + + AG P+I++PA Sbjct: 418 --ALEKYNLDAILFPSY-----------------------IGSTICAKAGYPSIAMPAGY 452 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + P G+ L F E L + E+ Sbjct: 453 MDNGRPFGITLASAAFSEGALIKLAYAFEQ 482 >gi|311695234|gb|ADP98107.1| amidase signature enzyme [marine bacterium HP15] Length = 495 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 140/510 (27%), Positives = 230/510 (45%), Gaps = 49/510 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L++ + + +L + +++ L + ++ I N +NA + + QKA A +D+ Sbjct: 8 LHYQSAHDLLKQLEAGTLTSEALTTALLERIREHNPTINAVVTLDEQKALTNARRADEER 67 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G AR L G+P+ +KD + G+ A + L +P+ + V Q+L D GA++LGK Sbjct: 68 AAGSARGPLHGLPLTLKDTWEVAGMTCTAGAPALRDHKPNRHADVVQRLEDAGAIILGKT 127 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ +A + +G +P TPGGSSGG++AA+A + +G+D G Sbjct: 128 NVPIYATDLQSYNKLFGVTNNP-----HNLAHTPGGSSGGAAAALAAGMTPLEVGSDLAG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIA 236 SIR PA F G G KPT S G I P L + G + R+ D +L+ IA Sbjct: 183 SIRTPAHFCGVFGHKPTRSLVSFRGHIPGPPGTQSRPDLVEGGPMARSAGDLELLMSVIA 242 Query: 237 GYDECDATCVNLPV-PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 G + +L + P +LDQ+ G+ + D L P ID+ +G L +A Sbjct: 243 GPRPAEERSWSLAMAPSELNSLDQARVGL-------WLEDPLCP-IDQELTEGYQNLGNA 294 Query: 296 ----GAKIVEISLP--HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 GA + E P ++ LPAY+ + A S++L + R + K I + Sbjct: 295 LSERGALVTEARHPLLSLEHILPAYFNLLGALLSTSL------KPAQRRQMKWIARLEPW 348 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + +G IG Y ++ ++R ++ + F++ VDV+LTP T Sbjct: 349 LKFLG-----PMTPFIGEYGRGVNQPVYQWMAWSEMREKMRAEIESLFQE-VDVLLTPVT 402 Query: 410 PTSAF------PLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGL 461 PT+A P+ K Y D F + GLPA SVP ++ +P + Sbjct: 403 PTTAIRHDHSHPVFKRRITVAGQPRAYMDQFCWIAFATLLGLPATSVPIGRTKEGLPFNV 462 Query: 462 QLIGQPFREETLFSVGQIIEKE--AGYFRP 489 Q+IG P + T ++E+ AG+ P Sbjct: 463 QVIGAPGMDLTTIGFAGLLEEAGLAGFLTP 492 >gi|260221605|emb|CBA30337.1| hypothetical protein Csp_C23040 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 623 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 131/484 (27%), Positives = 211/484 (43%), Gaps = 60/484 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVA-QKARAAAEESDKRIIN 65 ++++ + R+ ++ +++V+ + AI N + +A+I + RA A R Sbjct: 29 LSIASLQQAYRNGTLTPLQVVEQVVAAIANDSH--HAWIHRMGLDTLRARASSLMARGPE 86 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIP IKD G+ T A C + P +TV Q+L D GA+ +GK N+ Sbjct: 87 G--LPLWGIPFAIKDNIDLAGVPTTAGCPDY--AYIPEQSATVVQRLLDAGAIAIGKTNL 142 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+FA G + S YG ++ F GGSS GS+ +VA + S+GTDT GS Sbjct: 143 DQFATGLNGSRSPYGACLN-----SHNPGFVSGGSSAGSAVSVALGQVSFSLGTDTAGSG 197 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F VG+KP+ G S G++ +LD I T D+ + D DA Sbjct: 198 RVPAGFNHLVGLKPSLGLLSTHGVVPACRTLDVVSIFALTADDAQQVFAVAHAPDPHDAY 257 Query: 245 CVNLPVP--DYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVE 301 P D+ RA VG+PK +L + T + +++ + + GA++VE Sbjct: 258 SRATPAHGFDFGRAAR-----WRVGVPKADQLQFFGDTGYAQVFEEARAHAQSLGAELVE 312 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 I Q Y E RY +R + + + + + TR I G Sbjct: 313 IDFAPFQETARLLY-----EGPWVAERYQAIRAFIDAKPESVFPV---TREITLG----- 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAF 414 G L++ + + Y ++R L +R A G+D +L PT+PT A Sbjct: 360 ----GAKPLAADAFAAQY----RLRALARR--CNAVWSGIDCMLLPTSPTIHTLETMLAE 409 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P+ + + G+ +T VN+ AI+VP MP G+ + F+++ L Sbjct: 410 PIARNSD----FGY-----YTNFVNLLDYAAIAVPMGFRPDGMPCGVTFVAPAFQDQPLL 460 Query: 475 SVGQ 478 + Q Sbjct: 461 HLAQ 464 >gi|242070201|ref|XP_002450377.1| hypothetical protein SORBIDRAFT_05g004540 [Sorghum bicolor] gi|241936220|gb|EES09365.1| hypothetical protein SORBIDRAFT_05g004540 [Sorghum bicolor] Length = 618 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 132/486 (27%), Positives = 216/486 (44%), Gaps = 57/486 (11%) Query: 18 SKDISAVELVDSYIQAIENS---NSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S + V + ++ A+E + M +I A+ES +R G ++G Sbjct: 155 SGQTTPVMVARRFLAAVEECSGPDRNMGLFISCDPGDVLRQAQESTRRYQQGAPLSAMDG 214 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + + +KD T + L R ++ +L GAVM GK NM E G+S Sbjct: 215 VLVAVKDEIDCLPYPTTGGTRWLGSARRCVADAACVAQLRACGAVMAGKANMHELGAGTS 274 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G +P+ + + + G S G ++A AG LC ++G D GGS+R PA+ G Sbjct: 275 GINPHHGSTRNPY----NVGRVSGGSSGGSAAAVCAG-LCPVALGADGGGSVRMPAALCG 329 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPT GR S G++ ++ GI+ TV D+ I AIA + P P Sbjct: 330 VVGFKPTAGRLSNSGLLPLNWTVGMPGILAATVEDTLIAYAAIADQSK--------PSPL 381 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA--------GAKIVEISL 304 + L+ + T IP RL + D + + S A G + VE+++ Sbjct: 382 QQPELNLPLLTSTRSIPN-IRLAKYAKWFDDSSEDIRSLCGKALQMLRTHYGWESVEVTV 440 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A+Y+ +E +++LA+Y N G +V RI Sbjct: 441 PEIEEMRLAHYVTMGSECTASLAKY-----------------LNNMDRSEIGWDV--RIA 481 Query: 365 IGTY-VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + Y SSR Y +S LR R++ F E + D I+TP T +A+ L + + Sbjct: 482 LSAYGSFSSRDYLNSQRLRCRQMY------FHEKIFETADAIVTPMTGVTAYALQDDALS 535 Query: 423 SGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +G + +I +++A N GLPAI+VP + +P+GLQ IG+P+ E TL + Sbjct: 536 TGELDYINGAALVRYSIAGNFLGLPAITVPVGYDREGLPVGLQFIGRPWSEATLLHLAYA 595 Query: 480 IEKEAG 485 +++ G Sbjct: 596 MQESCG 601 >gi|21224657|ref|NP_630436.1| secreted amidase [Streptomyces coelicolor A3(2)] gi|3367750|emb|CAA20075.1| putative secreted amidase [Streptomyces coelicolor A3(2)] Length = 535 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 144/503 (28%), Positives = 238/503 (47%), Gaps = 42/503 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ + + E + R+ +S++ L +Y++ I+ + ++NA + R AA SD R Sbjct: 51 LDTVTIPELQARMNRGSLSSLRLTLAYLRRIKAVDPRINAVLRTSPTALRQAAA-SDLRH 109 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L+GIP+ +KD T+ + T A S L G P ++ + KL GAV+LGK Sbjct: 110 RLGRTRGPLDGIPVLLKDNVNTRDMPTTAGSLALAGSPPDTDAVLVGKLRAAGAVILGKA 169 Query: 123 NMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ E+A ++ TS + V + D+ P GSS GS+AA+A L +IGT+T Sbjct: 170 NLSEWANFRAAKPTSGWSAVGGQTNNPYVLDR-NPCGSSSGSAAALAASLAQVAIGTETD 228 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA G VG+KP+ G S+ G++ + D AG + R V D+A+ L ++G D Sbjct: 229 GSIVCPAGMNGVVGLKPSLGVVSQSGVVPISAEQDTAGPMARNVIDTALTLSVLSGRDTV 288 Query: 242 DATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 A P + A+ + +++G +G+ +RL L +D + L AGA++ Sbjct: 289 RAGD----APSFTDAVGRPGTLRGKRIGL---WRLPSLGAEVDALMTRTAERLTAAGAEV 341 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE------NTRSI 353 VE+SLP+ + + +E ++ Y R G R D+ E+ E RS Sbjct: 342 VEVSLPYQERLAELEFPALLSEFHRDIDAYLATRSGPR----DLAELIEFNRTHPRERSC 397 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAF-EQGVDVILTPTTPT 411 GQE+ + + + D Y R ++ L +R E +D I +P P Sbjct: 398 FAGQELFEQALA-----APSTTDPEYRAMRAELTDLSRRSIDEVMAAHDLDAIASPANP- 451 Query: 412 SAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P + G NDV + +AG P++SVPA ++P+GL L+ + Sbjct: 452 ---PAWTTDCARGD-----NDVIPSSTPAAVAGYPSLSVPAGFV-GELPVGLLLMAGNRQ 502 Query: 470 EETLFSVGQIIEKEAGYFRPHKW 492 + L S+G +E +R ++ Sbjct: 503 DVELLSLGAAVEHRLDAWRAPRY 525 >gi|307728655|ref|YP_003905879.1| Amidase [Burkholderia sp. CCGE1003] gi|307583190|gb|ADN56588.1| Amidase [Burkholderia sp. CCGE1003] Length = 469 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 130/493 (26%), Positives = 214/493 (43%), Gaps = 51/493 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL ++ + + +R++++S VELV ++++ IE + ++NA + +A A AA ++ Sbjct: 3 SELFYLDATRMAELVRTREVSPVELVHAHLERIEAVDPKVNAIV-TLADDALKAARAAEA 61 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +++G L G+P KD T G+ TQ S I G P ++T +L + GA++L Sbjct: 62 AVLSGQPLGPLHGVPFTAKDSIDTAGVATQRGSPIFKGRVPGADATSVARLKNAGAILLA 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF+ ++ G +PW + TPGGSSGG SAA+A + +GTD Sbjct: 122 KTNLPEFSYWIESDNLLSGRSNNPWDL-----ERTPGGSSGGESAAIAAGMSPLGLGTDL 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYD 239 S+R PA+ TG V +K T+GR GI AP G + R++RD A+ ++G D Sbjct: 177 AISVRGPAAQTGIVSLKATHGRVPMTGIWPRAPRRFWHVGPMARSIRDLALAFSQLSGPD 236 Query: 240 ECDATCVNL--------PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 DA + P PD + + VG E + P + T Q Sbjct: 237 GHDAFASSTVAFDAGVGPSPD---------RPLRVGWMVEPGFGPVDPEVAATVQAAAEA 287 Query: 292 LKDAGAKI--VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 L G + V I+ +AL + + E G+D E+Y+ Sbjct: 288 LSGRGMLVEPVRIAALERDFALDVFNRLHVMEMKPAFQEA--------TAGRDQDELYKM 339 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF-TEAFEQGVDVILTPT 408 R++ + + I + R D + R LI A + GVD Sbjct: 340 ARTMLALPDTSMKDYIDAEQAAERLRDGYADYFRTYDALITHVLPIPAHKHGVDTFTI-- 397 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 N ++ Y TV +N+ GLP IS+ + +P+ +Q++G Sbjct: 398 -------------NGRTVNATYLQGATVPLNVTGLPGISMRFGTSREGLPINVQIVGSWH 444 Query: 469 REETLFSVGQIIE 481 E T+ V ++E Sbjct: 445 AESTILQVASLLE 457 >gi|78060789|ref|YP_367364.1| amidase [Burkholderia sp. 383] gi|77965339|gb|ABB06720.1| Amidase [Burkholderia sp. 383] Length = 471 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 223/502 (44%), Gaps = 56/502 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ +E +R+ +D+SA EL S +Q ++ N ++NA ++V+A A A ++D Sbjct: 4 ELWRLSAAEMAERVARRDVSATELTRSCLQRLDAVNPRINAIVDVMADSALQGASDADAA 63 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+P+ +K T G T H +S VT L GA+++G+ Sbjct: 64 IARGAPVGPLHGVPLTVKINVDTAGYATTNGVRAFSDLIAHEDSPVTANLRKAGAIVIGR 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N F+ + +G +PW TPGGSSGG++AAVA + A + G D G Sbjct: 124 SNAPAFSYRWFTDNDLHGRTSNPWDP-----SLTPGGSSGGAAAAVAAGIGAIAHGNDLG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-----------AGIITRTVRDSAI 230 GSIR PA G G++P+ GR + ++ P+ + G + RTV D + Sbjct: 179 GSIRYPAYACGVAGLRPSTGR-----VPAYNPTQSKDRTLAVQLASVQGPLARTVGDLRL 233 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTV--GIPKEYRLDYLSPTIDKTWQQG 288 L A+A D DA + + +E A + T G+P + P + +Q Sbjct: 234 ALDAMAAGDARDAWWMPVAPDAHEAAFPARVAVCTALPGVPSD-------PVVVDAIRQA 286 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 WL++AG + E++ P A + + EA S L G I++ + Sbjct: 287 ARWLEEAGCIVEEVAPPRIAEACDLWLDLVTNEARSGL-------------GDVIMQHGD 333 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 + F + + L++ Y+ RT + RD+ + F + ++L P Sbjct: 334 ASIRTAFASQRR---------LATPLDLEGYMNGLARRTALLRDWQQFFVR-YPLLLMPV 383 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFT-VAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 + F + +++ +M I +A + GLP +SVP + +P G+QL+ Sbjct: 384 SCAQPFAIDADQHGDDAMRAIVERQGPLLATALLGLPGLSVPTGI-RDGVPTGVQLVAGR 442 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 F+E + G+ IE AG F P Sbjct: 443 FQEALCLAAGEAIEARAGIFTP 464 >gi|159185658|ref|NP_357361.2| hypothetical protein Atu3243 [Agrobacterium tumefaciens str. C58] gi|159140792|gb|AAK90146.2| glutamyl-tRNA amidotransferase subunit A [Agrobacterium tumefaciens str. C58] Length = 453 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 126/469 (26%), Positives = 201/469 (42%), Gaps = 57/469 (12%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFAT 84 L + + AI + Q ++ V + +A A AE + KRI G + L+GIP+ KD F Sbjct: 25 LAEETLDAIGKEDDQA-IFVSVTSARAMAEAESASKRIREGRSCGVLDGIPVAWKDLFDL 83 Query: 85 KGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 +G+ T A S +L P ++ V L G V +G+ NM EFA +YG + Sbjct: 84 EGMPTTAGSKVLSDDAPASRDADVVAALKQAGMVSIGRTNMSEFAFSGLGINPHYG---T 140 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P + + PGGSS G+ VA L +IGTDTGGS+R PA+F G VG K + GR Sbjct: 141 PRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFNGVVGYKASRGRY 200 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 S G+ A SLD G +TRTV+D+ + A+ G D +P + G Sbjct: 201 SMHGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGRTAAD--LARMP-----------LSG 247 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 +++ +P+ D + P + ++Q + L AGA + + A P + + Sbjct: 248 VSLVVPETVVFDGIEPGVAAAFEQAVERLVRAGASV-------RRQAFPVFSEL------ 294 Query: 324 SNLARYDGV--------RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 +L R G + R+EG D M R+++ T L + Sbjct: 295 FDLIREKGALVTAEAFSLHKARLEGADAARM-------------DPRVVVRTR-LGANIS 340 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF- 434 Y+ + R + F+ + +++++PT P A + N + + Sbjct: 341 MPDYIAIIEARDRMMAAFSAMISRD-EILISPTLPHVAAKVAPLVENDDAFFAMNAKTLR 399 Query: 435 -TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T N +S+P E MP+GL L G ++ L V E+ Sbjct: 400 NTQIGNFLDHCGVSIPCGTGEAGMPVGLLLSGLYGTDDRLLGVAMAAEE 448 >gi|330465535|ref|YP_004403278.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Verrucosispora maris AB-18-032] gi|328808506|gb|AEB42678.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Verrucosispora maris AB-18-032] Length = 544 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 128/479 (26%), Positives = 214/479 (44%), Gaps = 63/479 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++E+ +R+ ++ LV++Y+ I + A+ V+A A AAA + + Sbjct: 75 LTIAEAAWLIRANKLTPERLVEAYLARISAYDGVYRAFNLVLADAAIAAARAAARGPR-- 132 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ IKD F T+G+ T A S + F P Y++T +L GA++LGK M Sbjct: 133 -RGALHGIPLAIKDNFYTEGVRTTANSFLFQDFVPPYDATALARLKAGGAIVLGKTQMGP 191 Query: 127 FAMGSSNETSYYGPVISPWRSMD-STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 A + + ++ W + +TD PGGSS G++ AVAG + + IGT TGGSI Sbjct: 192 LATTRATTPAGVVTTVNAWTPTNRNTD---PGGSSTGTATAVAGRMATSGIGTQTGGSIT 248 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++ G+KPT GR S G+I + + D G + R +D+AI+L A+AG D D Sbjct: 249 SPSNAQALTGLKPTMGRVSAAGVIPLSYTRDHPGPLARDAKDAAIMLTAMAGEDPADPRS 308 Query: 246 VNLP-VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT------WQQGISWLKD-AGA 297 LP VP+ A + V + R+ L + T Q ++ L + GA Sbjct: 309 QGLPEVPNLIDAATPVYRRNRVRLRWNTRIGVLPGFANGTSATALARQAYLAQLAEIPGA 368 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 +V++ LP L A + ++ +R R E + + +N R GFG Sbjct: 369 ALVDVPLPEGWSQLTA-------------SMFNNIRLPERSE-PFMPYLRDNLR--GFG- 411 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + + +++ + + +L ++ + L+ + DV++ T P Sbjct: 412 -----VSVTSWLQGALLGGNEFLTGQRAKLLLLERVLDELFDACDVVVQ-TDP------- 458 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 V ++ GLP I+ P +P+G L G P+ E+ L SV Sbjct: 459 ------------------VPFDILGLPEIAFPIGFTSAGVPIGTILGGLPYAEDRLLSV 499 >gi|228952468|ref|ZP_04114549.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807205|gb|EEM53743.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 491 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 226/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + +L + GAV++GK Sbjct: 73 TKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTQLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSAKGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D N DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTRKSENRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|153868897|ref|ZP_01998626.1| Amidase [Beggiatoa sp. PS] gi|152074526|gb|EDN71371.1| Amidase [Beggiatoa sp. PS] Length = 529 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 135/500 (27%), Positives = 219/500 (43%), Gaps = 61/500 (12%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRII 64 F +V ++ K +S+ E+V + ++ I+ N ++NA ++ + + A A ++D + Sbjct: 73 FSSVGALSQAIQKKQVSSEEVVRACLERIKAVNPKLNAVVQQNQEDSLLALARKADAALA 132 Query: 65 NGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G+ L G+P+ IKD F T G+ + + F P ++TV ++L + GA++LGK N Sbjct: 133 RGENWGPLHGVPMTIKDSFDTVGLISTGGTLGRKNFVPTEDATVVKRLREAGAILLGKTN 192 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF + + YG +P+ S PGGSSGG++A +A IG+D GGS Sbjct: 193 TPEFTLSFETDNLVYGKTNNPYDITKS-----PGGSSGGAAAIIAAGGSPFDIGSDLGGS 247 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGII----SFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 IR PA G GIKPT GR R G I + Q G + R V D A+LL I G D Sbjct: 248 IRFPAHLCGIAGIKPTSGRVPRTGHIYPFGGLQDNFQQVGPLARYVDDLALLLPIIMGPD 307 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + + +P + I + V + + +P +T L DA + Sbjct: 308 WIDPSIMAMP---WRDPATIDITKLRVSFHTDNGVVTPTPETMQTVSSVAKSLADAKIAV 364 Query: 300 VEISLPHTQYAL----PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 E+ + P + S A L + + V++ ++G Sbjct: 365 EEVRPTGIEETFTVGWPFFLWDSGAGIKQLLKKANTVQHSPPLQG--------------- 409 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF-----TEAFEQGVDVILTPTTP 410 +DS L ++ LI R + F + DVIL+P Sbjct: 410 ------------------VFDSPSLSVSELDQLITRWYEWRSKMLMFMKNYDVILSPANA 451 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + P G +N IY+ +T+ N+ G P + V A + MP+G+Q++ +P RE Sbjct: 452 SPDHPHGLTKNPDNL--PIYS--YTLTHNLTGWPGVVVRAGTSPEGMPIGVQIVARPGRE 507 Query: 471 ETLFSVGQIIE-KEAGYFRP 489 + +V + IE K GY RP Sbjct: 508 DVALAVAKFIETKHGGYQRP 527 >gi|298293556|ref|YP_003695495.1| amidase [Starkeya novella DSM 506] gi|296930067|gb|ADH90876.1| Amidase [Starkeya novella DSM 506] Length = 476 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 131/466 (28%), Positives = 220/466 (47%), Gaps = 40/466 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M E+RDR+ +++S VEL + + + + +NA+ + ++A AAA E++ ++ G Sbjct: 8 MGAREARDRVARRELSPVELTRAALDTAAATQASLNAFFLIFEEEAMAAAREAEATVMRG 67 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP KD A +G + S + ++ ++ GA+++GK Sbjct: 68 ETLGPLHGIPFSAKDLMAVRGARYASGSRAMADNVASVDAPAVERAKAAGAILIGKTTTS 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF ++ G +PW TPGGSS G++A+VA + ++GTD GGSIR Sbjct: 128 EFGCKPVGDSPLTGITRNPWNLAK-----TPGGSSAGAAASVAAGITPFALGTDGGGSIR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P +F+G G+K +GR + S P+L G I R + D+A+L AIAG+D D Sbjct: 183 IPCAFSGLAGLKGQFGRVP-VWPTSATPTLAHVGPIARDMDDAALLFSAIAGHDARDPFS 241 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V PVPD E A+ Q I+GM + SP + + + + L D GA + E+ Sbjct: 242 VAGPVPDVEAAVTQPIEGMRIAWSPTLGYARPSPEVLRVTKAAVERLSDLGAVVEEVE-- 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI----GFGQEVKH 361 PA I+ Y GV LR ++ ++ + + ++ GQE++ Sbjct: 300 TVFETDPAELWIA--------EFYAGVGTRLRSVVENQRDLLDPSVAVVLEAALGQEMRA 351 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 Y++ + R +R ++R F + D +++P P S+ G + Sbjct: 352 ------------YYETVFAR-YALREEMRR-----FFERYDALVSPVLPVSSLDAGLDMP 393 Query: 422 NSGSMGHIYNDVF-TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 S ++ + VF T N+ G PA +V A L MP+GLQ++G+ Sbjct: 394 AHLSDRNLVSWVFYTYPFNLTGQPAAAVCAGLDADGMPVGLQVVGR 439 >gi|297154124|gb|ADI03836.1| secreted amidase [Streptomyces bingchenggensis BCW-1] Length = 532 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 141/498 (28%), Positives = 235/498 (47%), Gaps = 37/498 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + E + R+ +++ L +Y++ IE + +++A + R AA SD R Sbjct: 49 DLDTVTIPELQARMAEGSLTSTALTTAYLRRIEAVDPKIHAVLRTDPTALRQAAA-SDIR 107 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +GD R L+GIP+ +KD T+ + T A S L G P ++ + +L + GAV+LGK Sbjct: 108 HRSGDTRGPLDGIPVLLKDNVNTRDMPTTAGSLALAGSPPDVDAALVTRLRNAGAVILGK 167 Query: 122 LNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 N+ E+A ++ TS + V + D+ P GSS GS AA+A L +IGT+T Sbjct: 168 TNLSEWANFRAAKPTSGWSAVGGQTNNPYVLDR-NPCGSSAGSGAALAASLAQVAIGTET 226 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PA G VG KP+ G S+ G++ + D AG + R V D+A+ L I+G Sbjct: 227 DGSIVCPAGMNGVVGHKPSLGLVSQAGVVPISAEQDTAGPMARNVVDTALTLSVISGTSR 286 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + D E S++G +G+ +RL L P +D + L+ AGA++V Sbjct: 287 PGGPGG---LAD-EMTRPSSLRGKRIGL---WRLPSLGPRVDALMTRTAEKLRTAGAEVV 339 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQE 358 E++ P+ Q + +E ++ Y R G R E + + R+ GQE Sbjct: 340 EVTPPYQQRLAELEFPALLSEFHRDIDAYLATRDGPRNLAELVEFNRTHPAERTCFAGQE 399 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPL 416 + + + + D Y R +++ L +R E +D I PT P P Sbjct: 400 LFEQALA-----APPTTDPGYRAMRAELKDLSRRSIDETMAAHRLDAIAAPTNP----PA 450 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + G NDV + ++G P++SVP+ ++ +P+GL L+ ++ L Sbjct: 451 WTTDCARGD-----NDVIPSSTPAAVSGYPSLSVPSGFVDE-LPVGLLLMAGDHQDAGLL 504 Query: 475 SVGQIIEKEAGYFRPHKW 492 S+G +E R H W Sbjct: 505 SLGAAVE-----HRLHAW 517 >gi|319948856|ref|ZP_08022969.1| putative amidase [Dietzia cinnamea P4] gi|319437458|gb|EFV92465.1| putative amidase [Dietzia cinnamea P4] Length = 490 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 141/495 (28%), Positives = 222/495 (44%), Gaps = 53/495 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 R S VE + + AIE + ++NA+ V + A A S++R +G L+G+ Sbjct: 14 FRDGAYSPVESAEEALDAIERVDGRINAFCHVDREATLAEAGRSEERYRSGVPLGPLDGV 73 Query: 75 PIGIKDCFATKGIHTQACSHIL--------DGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 P IKD F T+G+ T SH+L G P ++ VT + + G V++GK E Sbjct: 74 PTSIKDIFYTRGVPTLRGSHLLADKPGAADPGSWPD-DAPVTSAVHEAGCVVIGKTTTPE 132 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA + + G +P TPGGSSGG+++AVA L ++GTD GGS+R Sbjct: 133 FAWKGVTDNTLTGITRNP-----HDPALTPGGSSGGAASAVAAGLGQLALGTDGGGSVRI 187 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G V +KPTYG F +L AG +TRTV D+A + A+ D D + V Sbjct: 188 PAAFCGIVALKPTYGVIPMFPSSPFG-TLAHAGPMTRTVSDAAAFMDALLRPDPRDWSAV 246 Query: 247 ----NLPVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 P P A D+ ++G+ V +++ + + L + Sbjct: 247 PARATTPGPGGYLAAATEGTRGDRPLEGLRVAYSPTLGFGRNDADVEREVTRAVGVLSEL 306 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA V+ + P + A++++ A ++ LA + G D +E + + Sbjct: 307 GAH-VDTADPGVTDPVDAFHVLWFAGLAAVLAPH----------GPDAIERVDPSM---- 351 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 R +G Y S + YL A +R + + F Q D+++TPTTP AF Sbjct: 352 ------REALGRYHDYSA---ADYLDAVAVRMALGARMAD-FHQRYDILITPTTPIPAFD 401 Query: 416 LGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 +G + S +T NM PA+SVP + +P+GLQ++G F + + Sbjct: 402 VGSDVPPGWHSPDWTSWTPYTYPFNMTQQPALSVPCGTTDSGLPVGLQVVGARFEDRLVV 461 Query: 475 SVGQIIEKEAGYFRP 489 VG +E G P Sbjct: 462 RVGAALEVALGRVVP 476 >gi|157372138|ref|YP_001480127.1| amidase [Serratia proteamaculans 568] gi|157323902|gb|ABV42999.1| Amidase [Serratia proteamaculans 568] Length = 449 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 121/417 (29%), Positives = 183/417 (43%), Gaps = 47/417 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G+P+ +KD F G T A S +L D + + V +L GAV++GK NM EFA Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLADAPVANNHAAVVAQLLQAGAVVIGKTNMTEFAY 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW D PGGSS G++ AVA +C +IG+DTGGS+R PA+ Sbjct: 130 SGLGINPHYGTPANPW---DRPAGRIPGGSSSGAAVAVADGMCFGAIGSDTGGSVRIPAA 186 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G KPT R S G++ +PSLD G+I V AG D P Sbjct: 187 FCGLTGYKPTARRISSRGLLPLSPSLDSIGVIAHDV----------AGCIALDTVIAQQP 236 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + ++ L Q+ +P+ LD L + + + L AGA+I I P ++ Sbjct: 237 LHPQQKTLSQA----RFAVPQTLALDGLDEEVTAAFHLSVERLVQAGAQIEFI--PCHEF 290 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A ++ A+ + R+ + I E E+ + V RI G + Sbjct: 291 AE-----LAAINAAGGFTALESWRWHQPL----IAEHAED-----YDPRVLSRIRRGQLL 336 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 D LR + R +R T A E+ D +L PT P A + + + + + I Sbjct: 337 DEQ---DLQQLRMQ--RADWQRRVTAAVEK-FDALLMPTLPFVAPTIAELQEDEDAYFRI 390 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIEK 482 +N A+S+P C++ P+GL + G P +E L IE+ Sbjct: 391 NGAALRNPSVINFLDGCALSLP---CQRGDTAPVGLMVAGLPLHDEALLGWALAIER 444 >gi|254281977|ref|ZP_04956945.1| indoleacetamide hydrolase [gamma proteobacterium NOR51-B] gi|219678180|gb|EED34529.1| indoleacetamide hydrolase [gamma proteobacterium NOR51-B] Length = 485 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 123/422 (29%), Positives = 192/422 (45%), Gaps = 43/422 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 LEG+ + IKD G+ A + L F P +T+ ++L + GA ++GK NM E A G Sbjct: 90 LEGLRLCIKDNVHVAGLPNTAGTPALANFVPLEHATIIERLLNAGATIVGKNNMHELAYG 149 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ YG V + D PGGSSGG++ AVA L A IGTDTGGS+R PA+ Sbjct: 150 ITSANVAYGHVANARD-----DTLLPGGSSGGTAVAVALGLADAGIGTDTGGSVRIPAAL 204 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG +PT GR G+ + + D AG IT V+ +A+L +AG P+ Sbjct: 205 NGLVGFRPTTGRYPNNGMTLISQTRDTAGPITHDVKTAALLDSVMAGE----------PL 254 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 E + ++ +G+P+ Y L P + + + +S L++AG +V + + Sbjct: 255 SALESIAPKDLR---LGVPESYFYKDLHPEVRQITEDALSRLENAGVTLVRADINNLLEL 311 Query: 311 LPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMY--ENTRSIGFGQEVKHRIMIGT 367 A + + E S L Y +G+ + D++ ++ R + Q V+ I Sbjct: 312 NNAVGFPVVLYETSQLLPGYLST-HGIDLTVSDLINQIADDDVRGV-VSQAVEGAI---- 365 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-LGKEENNSGSM 426 S Y R + R + EA GV ++ PTT A P G E + Sbjct: 366 ---SEENYQLALNTQRPKLQAVYRAYFEA--HGVSAVIFPTTSLPALPAAGNLETVPTTS 420 Query: 427 G-------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 G +I N T + AG+P IS+PA P+G++L G + L ++ + Sbjct: 421 GRQPTFQTYIRN---TDPASNAGIPGISLPAGETPSGAPVGIELDGPAGTDRRLLAIAAV 477 Query: 480 IE 481 IE Sbjct: 478 IE 479 >gi|226363540|ref|YP_002781322.1| amidase [Rhodococcus opacus B4] gi|226242029|dbj|BAH52377.1| putative amidase [Rhodococcus opacus B4] Length = 549 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 133/484 (27%), Positives = 222/484 (45%), Gaps = 48/484 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ ++ E+ L+S+ + EL+D+ + + + A+I + ++A AAE + + Sbjct: 46 SDPALLSAVEAASLLQSRALHPRELLDACLSRSAAHDGGIEAWIRIYPEQAYEAAESAAR 105 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R+ G A + G+PI +KD +A G+ A S +LDG ++ V ++L D G V++G Sbjct: 106 RLAAGSAPLVCGLPIALKDLYAVAGLPVTASSGVLDGNIAAGDAGVWRQLRDAGMVLMGH 165 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + EFA+G++ V +PW +++PGGSSGGS+AA+A ++GTDTG Sbjct: 166 AHTHEFAIGTATPQ-----VGNPWDV-----RYSPGGSSGGSAAALAARFAPCALGTDTG 215 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PAS G IKPT+GRCS G+I + D G + R+V D+++LL +AG D Sbjct: 216 GSLRIPASACGITSIKPTFGRCSTSGVIPLTWTRDHTGPMGRSVADASLLLSHMAGVDVD 275 Query: 242 D-ATCVNLPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D +T V VP L + + G G+P D L +I + + ++ Sbjct: 276 DPSTSVGPDVPAEGYPLTAVGGTRPLSGKRFGLPHGV-ADDLPGSIGTLFAGFLDGVRAL 334 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIG 354 G +IV+++ P E + L D +G + D L Y+ ++ Sbjct: 335 GGEIVDVTEP---------------EVPTGLLSGDYAEFGSYHRQFADRLPAYDPESALA 379 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSA 413 + ++ + Y + R + D+ F + +D IL P PT Sbjct: 380 ATAAMASLVLP----------VADYFALERARLRFQHDYNRMFADHRLDAILRPGAPTDG 429 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREET 472 ++S G N + N G P + P +P G+QL G P+ E Sbjct: 430 VRRDALSDSSVFAGARENYFW---ANYTGAPVVCTPVGRSAATGIPFGVQLGGVPWSEAA 486 Query: 473 LFSV 476 L S+ Sbjct: 487 LISI 490 >gi|163852785|ref|YP_001640828.1| amidase [Methylobacterium extorquens PA1] gi|163664390|gb|ABY31757.1| Amidase [Methylobacterium extorquens PA1] Length = 469 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 224/504 (44%), Gaps = 57/504 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +FM E R + ++ IS VEL + + E S + +NA+ ++ ++AR+AA ++ Sbjct: 3 SDFDFMTALELRRLIAARAISPVELTEHALARAEASQASLNAFCHLMPEEARSAARRAEA 62 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+P+ +KD A G + S + ++ ++L GA+++G Sbjct: 63 AVMRGSPLGLLHGLPVSVKDLIAVGGQPYASGSRAMASNVAAADAPAVERLRAAGAIIIG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ G PW TPGGSS G++A+VA + ++GTD Sbjct: 123 KTTTSEFGAKPVGDSPLTGITRHPWDLAK-----TPGGSSAGAAASVAAGITPLALGTDG 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ TG VG+K +GR + S P+L G + R V D+A+L A+AG+D Sbjct: 178 GGSLRIPAALTGLVGLKAQFGRVP-VWPTSATPTLAHVGALARNVADAALLTTAVAGHDP 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVPD A S+ G+ V +P + + L D GA + Sbjct: 237 RDPFAVAGPVPDLLGAAKASVAGLRVAWSATLGYARPNPEVAALARAAAMALADQGAIVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-----KDILE-MYENTRSIG 354 E+ + PA A Y G+ G R+ G +D+L+ + Sbjct: 297 EVE---------TVFESDPA-ALWTAEFYAGI--GTRLRGVLESRRDLLDPAVADVLDAA 344 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 QE++ + + LR R I F G DV+++PT P S+ Sbjct: 345 LAQEMR--------AYYETVFARYALRDRMIN----------FFTGYDVLVSPTLPISSL 386 Query: 415 ------PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P G E+ + S +T N+ G PA SV A + MP+GLQ++G+ Sbjct: 387 EAGRNIPEGLEDRSLVSWAF-----YTYPFNLTGQPAASVCAGIASDGMPVGLQIVGRTL 441 Query: 469 REETLFSVGQIIE--KEAGY-FRP 489 E + IE K GY RP Sbjct: 442 GEFDVVRTAAAIEQTKPPGYNLRP 465 >gi|330958726|gb|EGH58986.1| amidase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 507 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 139/491 (28%), Positives = 231/491 (47%), Gaps = 46/491 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K IS VEL+D+ I+ IE+ N ++NA+ ++AR A +++ Sbjct: 5 SELLGKSATELRALIGNKQISPVELLDACIERIESFNPKINAFAATCFERARDEAVIAEQ 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+M+G Sbjct: 65 AVLQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNLPAQDNLFVARLRAAGAIMVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + RTV D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRTVADTLLQLRASAGLG 238 Query: 240 ECDATCVNLPVPDYE---RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 + D ++ V D E R +D S + VG +++ + I +++ I+ ++ Sbjct: 239 QSDP--LSYAVADDEFAPRTVDLS--QLRVGYSEDFGACAVDNHIRAVFREKINAMRPLF 294 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGF 355 I L T A + ++ R + GL+ +D + NTR+ Sbjct: 295 KSCEAIDLNLTS-----------AHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA--- 340 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +G + C +H ++R I R F + FE D+IL PTTP S FP Sbjct: 341 ------NFEMGAAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDLILAPTTPVSPFP 388 Query: 416 ---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 L E N + + Y + + + PA+S+P MP GLQ+IG + Sbjct: 389 WSELYLREVNGVQLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGSFRGDA 448 Query: 472 TLFSVGQIIEK 482 L + + +E+ Sbjct: 449 KLLACAEALEQ 459 >gi|229172781|ref|ZP_04300336.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus MM3] gi|228610669|gb|EEK67936.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus MM3] Length = 491 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 142/496 (28%), Positives = 224/496 (45%), Gaps = 66/496 (13%) Query: 16 LRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + +++ ELV Y+ I + ++N+ +E+ A +R G L Sbjct: 22 MEAGQLTSKELVMYYLHRIAKYDQEGPKINSILEINPDAIFIAEALDYERKTKGGRGPLH 81 Query: 73 GIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK NM E A G Sbjct: 82 GIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKTNMTELANGM 141 Query: 132 SNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S + ++ G I+P+ + + D GGSS GS+ AVA S+GT+T GSI Sbjct: 142 SFDMWAGYSARGGQTINPYGTGE--DDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILS 199 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VGIKPT G SR GII S D AG RTV D+AILL ++ G DE D Sbjct: 200 PAVQNSVVGIKPTVGLISRRGIIPLTYSQDTAGPFARTVTDAAILLGSLTGLDEKDVATH 259 Query: 247 N---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQGISWLKDAGA 297 DY + LD + + G +G+ PK+Y Y + D K +++ I L+ GA Sbjct: 260 KSEGKAEHDYTKYLDDNGLNGAKIGVYSNAPKDY---YETGEYDEKLFKETIEVLRSEGA 316 Query: 298 KIVE-ISLP--HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENT-- 350 +VE I +P H +++ + +S E +L Y + + V +++E +N Sbjct: 317 TVVEDIDIPSFHREWS----WGVSLYELKHSLDNYLSKLPSTIPVHSISELMEFNKNIAE 372 Query: 351 RSIGFGQ---EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 R++ +GQ E++ + + YL AR D + EQG+D L Sbjct: 373 RALKYGQTKLEIRKD-------FPNTLRNPEYLNAR------LEDIYFSQEQGIDFALEK 419 Query: 408 TTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + FP + + + AG P+I++PA + P G+ L Sbjct: 420 YNLDAILFP---------------SYIGSTISAKAGYPSIAIPAGYMDNGRPFGITLAST 464 Query: 467 PFREETLFSVGQIIEK 482 F E TL + E+ Sbjct: 465 AFSEGTLIKLAYAFEQ 480 >gi|222102715|ref|YP_002539754.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] gi|221739316|gb|ACM40049.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] Length = 451 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 134/475 (28%), Positives = 208/475 (43%), Gaps = 62/475 (13%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIG 77 + +S + +V + ++ I+ N ++ A I + +A A++++ I G L GIP+ Sbjct: 21 EGLSPLSVVKTCLERIQEQNDKLGAMIFIARAEALEEAQKAEAAIRAGKRIGPLHGIPVA 80 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD +G T SH+L G ++ L GA+++GK N+ E G+ ++ + Sbjct: 81 IKDMIDVRGWQTTGGSHLLHGDHAVNDARCVANLRSAGAIIIGKSNLHELTAGN-HDNPW 139 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG V++P + T GG+S GS+AAVA C A+IGTDTGGS R A+ TG VG K Sbjct: 140 YGKVVNPLDAERGT-----GGTSSGSAAAVAAGFCIAAIGTDTGGSNRSTAAATGLVGFK 194 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PT G G + AP+ D G I R V D+ +L A+AG D P+ R Sbjct: 195 PTNGVIDPTGTMPTAPTFDTIGPIARNVADARLLHYAMAGID----------TPEKRRV- 243 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 S+ GM +G+ + + P I ++ + AGA+I LP + Sbjct: 244 --SVAGMRIGLCPDLYAAAVDPAIATAHDAFLALARRAGAQI---------QVLPFRFAR 292 Query: 318 SPAEASSNLARYD-GVRYGLRVE------GKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 EA + Y+ YG VE G +L N ++ Sbjct: 293 EVREAGLTILVYEFTAFYGPLVEAHPGRVGAAVLAFLSN-----------------GALI 335 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S Y S +I+ R +E VDV+LTP P A L E+ G+ Y Sbjct: 336 SEAAYRSALAYQAQIQGEFHRLLSE-----VDVLLTPVVPGLAPRLSDEQTAVGNDFMPY 390 Query: 431 NDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 F N G+PA+++P + +P +Q+ E LFSV + + + Sbjct: 391 GLAGGHFRRWANFFGVPALAMPVPMA-GALPASIQITTPRNTENYLFSVCEALSR 444 >gi|284041152|ref|YP_003391082.1| amidase [Spirosoma linguale DSM 74] gi|283820445|gb|ADB42283.1| Amidase [Spirosoma linguale DSM 74] Length = 555 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 129/497 (25%), Positives = 226/497 (45%), Gaps = 69/497 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F V + + +R+K I++VEL ++ ++ + +++ I + + A + A+ +D+ Sbjct: 115 ELAFYTVGQLGELIRTKQITSVELTQFFLNRLKTYDPKLHCVITLTEELALSQAKRADEE 174 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G R L GIP G KD A KG T + ++TV Q+L GAV+ GK Sbjct: 175 LKAGKYRGPLHGIPYGAKDLLAKKGYKTTWGAMPYKDQTFDLDATVIQRLEKAGAVLCGK 234 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + + AMG + + G +PW + + SS GS+++V+ L +IGT+T Sbjct: 235 MTLGALAMG---DVWFGGMTRNPWSTTAGSSG-----SSAGSASSVSAGLLPFAIGTETL 286 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P++ GT G++PT+GR SR G ++ + S+D+ G ITR+V D A++ AI G D Sbjct: 287 GSIVSPSTVCGTTGLRPTFGRVSRHGAMALSWSMDKIGPITRSVEDCALVFNAIYGPDGN 346 Query: 242 DATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D T +N P + +++G +G + K + +Y + D Q L+ GA++V Sbjct: 347 DPTVMNAP---FRYTPLVTLKGTRIGYVKKAFESNYPNRANDSLTLQT---LRKLGAELV 400 Query: 301 EISLPHTQYALPAYYI-----ISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-RSIG 354 LP +PA I + A A L R +R +GK+ + N+ RS Sbjct: 401 TFDLPT---GVPAGRISFLLTVEAAAAFDELTRSGRDDLMVR-QGKN---AWPNSFRSAR 453 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSA 413 F V+ Y++A + RT + + + + +DV ++P Sbjct: 454 FVPAVE------------------YIQANRARTKLINEMADQLKAAKIDVYVSPA----- 490 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 Y N+ G P + +P ++ +P + +GQ F E + Sbjct: 491 ----------------YAGGNLTITNLTGHPCVVLPNGFTKQNLPTSITFMGQLFEEGKV 534 Query: 474 FSVGQIIEKEAGYFRPH 490 +V + + + + H Sbjct: 535 LAVAKAYQDATEWHKKH 551 >gi|134099377|ref|YP_001105038.1| secreted amidase [Saccharopolyspora erythraea NRRL 2338] gi|133912000|emb|CAM02113.1| secreted amidase [Saccharopolyspora erythraea NRRL 2338] Length = 468 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 144/498 (28%), Positives = 233/498 (46%), Gaps = 48/498 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + ++R+ +++V L +Y++ I + + A + R AA SD R G Sbjct: 1 MTIPQLQERMARGSLTSVSLTAAYLRRIRAVDPVIGAVLRTDPAALRQAAA-SDLRHRTG 59 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L+GIP+ +KD T+ + T A S L G P ++ + +L + GAV+LGK N+ Sbjct: 60 AVRGPLDGIPVLLKDNVDTRDLPTTAGSLALAGRPPRDDAALVTRLREAGAVVLGKTNLS 119 Query: 126 EFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E+A + TS + V R+ D+ P GSS GS+AAVA L +IGT+T GSI Sbjct: 120 EWANFRAEKPTSEWSAVGGQTRNPYVLDR-NPCGSSSGSAAAVAASLAQVAIGTETDGSI 178 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA G VG KP+ G S G++ + D AG + R V D+A+ L + G D Sbjct: 179 VCPAGMNGVVGHKPSLGLVSGDGVVPISSEQDTAGPMARNVVDAALTLSVLRGDRAGDPP 238 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 PVP ++G +G+ +RL L P +D + + AGA++VE++L Sbjct: 239 ---RPVP---------LRGKRIGL---WRLPSLGPDVDAVMTRAAERFRAAGAEVVEVAL 283 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR------SIGFGQE 358 P+ + +E ++ Y R G R D+ E+ E R + GQE Sbjct: 284 PYQDRLAELEFPALLSEFHRDIDAYLATRDGPR----DLAELVEFNRTHPQEQTCFAGQE 339 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPL 416 + R+++ + D YL R ++ L R E +D I +P P P Sbjct: 340 LFERVLV-----APATTDPGYLAMRAELDELSARSIDETMTAHRLDAIASPANP----PA 390 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + G NDV + +AG P++SVPA ++P+GL L+ +++ L Sbjct: 391 WTTDCVRGD-----NDVIPSSTPAAVAGYPSVSVPAGFV-GELPVGLLLMAGDRQDQALL 444 Query: 475 SVGQIIEKEAGYFRPHKW 492 ++ E+E G +RP ++ Sbjct: 445 ALAAAAERELGAWRPPRY 462 >gi|91976358|ref|YP_569017.1| amidase [Rhodopseudomonas palustris BisB5] gi|91682814|gb|ABE39116.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 463 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 210/470 (44%), Gaps = 55/470 (11%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIK 79 +A +LVD + I + + +I V A AAE DK R I GIPI IK Sbjct: 34 TARKLVDDCLARIADQAGEGARTFIHVDRDAAIKAAEAMDKLREIKAAPSPFAGIPISIK 93 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F KG T+A S LD P ++ +L G V++G+ NM EFA +Y Sbjct: 94 DLFDIKGQVTRAGSRALDDNPPAEADAPAVARLRRAGFVVIGRTNMTEFAYSGIGINPHY 153 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P + + PGGSS G++ +VA + A +GTDTGGS R PA+F G VG KP Sbjct: 154 G---TPKAAFNRDAGHVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIPAAFNGIVGYKP 210 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-VPDYERAL 257 + R R G + + SLD G + R+V A+L DA + P VP R Sbjct: 211 SQHRVPRDGAVPLSFSLDSIGPLARSVDCCAVL----------DAVLADAPIVPLAPR-- 258 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 S++G+ + +P LD L + +++ + L GA I +I LP + + Sbjct: 259 --SLKGLRLAVPTTVALDELDDAVSVAFERALKTLSGHGAIIEKIELPE-------FLDV 309 Query: 318 SPAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 +P A A Y RY + +G ++Y+ V+ RI+ G ++ Sbjct: 310 APMMAKGGFAAAESYAWHRYLIVAQG----DVYD--------PRVRERILRGETQSAADY 357 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGHIYNDV 433 D + ARK +LI R A D ++ PTT + + ++ + + ++ Sbjct: 358 VD--LITARK--SLIAR--ACARLAPYDALVMPTTANTPPKIADLADDKAFTKANLLALR 411 Query: 434 FTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 +NM AIS+P C + + P+GL L G + +F + +E Sbjct: 412 NCTLINMIDGCAISLP---CHRDGEAPVGLMLAGVNGADREIFEIAASLE 458 >gi|320323599|gb|EFW79683.1| amidase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328232|gb|EFW84236.1| amidase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881970|gb|EGH16119.1| amidase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 507 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 139/489 (28%), Positives = 230/489 (47%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K IS VEL+D+ I+ IE+ N ++NA+ ++AR A ++ Sbjct: 5 SELLGKSATELRALIGNKQISPVELLDACIERIESLNPKINAFAATCFKRARDEALLAEH 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+++G Sbjct: 65 AVLQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIVVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLG 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + ++ R +D S + VG +++ + TI +Q+ I+ LK Sbjct: 239 QSDPLSYAIADDEFVPRTVDLS--QLRVGYSEDFGACAVDDTIRAVFQEKINALKPLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L + A + ++ R + GL+ +D + NTR + F Sbjct: 297 CEAIDLN-----------LGSAHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTR-VNF-- 342 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +GT + C +H ++R I R F + FE D+IL PTTP S FP Sbjct: 343 ------EMGTAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + + + PA+S+P MP GLQ+IG + L Sbjct: 391 ELYLREVNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + +E+ Sbjct: 451 LACAEALEQ 459 >gi|271966382|ref|YP_003340578.1| amidase [Streptosporangium roseum DSM 43021] gi|270509557|gb|ACZ87835.1| amidase [Streptosporangium roseum DSM 43021] Length = 473 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 131/510 (25%), Positives = 233/510 (45%), Gaps = 63/510 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL+ ++ +++ RS+ +S VEL ++ I E + +NA +A A+ ++ Sbjct: 1 MDELHHISAADALRAFRSRQLSPVELTEAVIARAERTEPVVNALCHRFFDEALRQAKRAE 60 Query: 61 KRII--NGDARDLEGIPIGIK-DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 +R +G R LEG+P +K D T TQ D H S ++L D G + Sbjct: 61 RRYAGQDGPPRPLEGLPTVVKEDEPVTGHPWTQGSLRYRDVVAGH-TSLFVRRLLDAGVI 119 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + + EFA + ++ +G +PW +F+PGGSSGGS AA+A + G Sbjct: 120 VHARSTASEFASAAFTHSALWGVTRNPW-----NPEFSPGGSSGGSGAALAAGSTVLATG 174 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD---QAGIITRTVRDSAILLKA 234 +DT GSIR PASF+G VG KP +GR + LD +G++ RTV D A++ Sbjct: 175 SDTAGSIRVPASFSGVVGFKPPHGRVP----VDPPYHLDTYVHSGVLARTVADVALMQNV 230 Query: 235 IAGYDECDATCVN----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +AG D + LP P L + ++GM + + ++ + P + + ++ Sbjct: 231 VAGPHPGDVGSLRPRHVLPDPA---ELGRDLRGMRIALSEDLGDWAVDPEVRRNTREFGE 287 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD---ILEMY 347 L+ AGA++ E++LP +P ++ ++ + + G + +G+ L Y Sbjct: 288 RLRAAGARVEEVALP-----VPRAQVLR----AAAIHFHHGFGAAVAADGRKPGAPLTPY 338 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + + ++ + + S Y R + L++R D ++ P Sbjct: 339 AQAFARWAAEGAAGAGVLDGFAIESDLY-------RPVGELLER---------FDALVCP 382 Query: 408 TTPTSAFPLGKEENNSGS------MGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLG 460 T T G++ + G +GH + + N M P ++VP+ + + +P G Sbjct: 383 TAATRGLVAGEDYLDHGPEVDGERLGHYLESLLALPFNIMNRCPVLAVPSGVADNGVPTG 442 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 +Q++G+PF + T F VG +E+ RPH Sbjct: 443 VQIVGRPFDDTTPFRVGAAVEQ-----RPH 467 >gi|293605663|ref|ZP_06688042.1| amidase [Achromobacter piechaudii ATCC 43553] gi|292815947|gb|EFF75049.1| amidase [Achromobacter piechaudii ATCC 43553] Length = 449 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 21/295 (7%) Query: 16 LRSKDISAVELVD-SYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 LR S+V L + + +A + + + ++ A+ A A A SD G R +EG Sbjct: 12 LREGRTSSVALTELALARAQDAAGEGARVFTKLYAESALAQARASDTLRAAGIVRSAVEG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE--STVTQKLWDNGAVMLGKLNMDEFAMGS 131 +PI IKD F +G T A S +G P E + V Q+L GAV++G+ NM EFA Sbjct: 72 LPISIKDLFDIEGETTMAGSVAREG-EPAAEENAEVVQRLIAAGAVIIGRTNMTEFAYSG 130 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +YG ++P+ D PGGSS G++ +VA + A IG+DTGGS+R PA+ Sbjct: 131 LGINPHYGTPLNPY---DRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAALC 187 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G KP+ R S G++ + +LD G I +VR A L ++G PVP Sbjct: 188 GLTGFKPSAWRVSMTGVLPLSANLDSIGPIAASVRCCAELDAILSGDGG--------PVP 239 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + S++G+ + +P LD + + T+ ++ LKDAGA + EI++P Sbjct: 240 EA-----MSLRGLRLAVPTTLALDAMDKHVADTFAATVAKLKDAGALVDEIAIPE 289 >gi|228900682|ref|ZP_04064901.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis IBL 4222] gi|228858940|gb|EEN03381.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis IBL 4222] Length = 491 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 141/504 (27%), Positives = 221/504 (43%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGVRGPLHGIPVLVKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S + ++ G ++P+ + D GGSS GS+ AVA SIG Sbjct: 133 NMTELANAMSFKMWAGYSARGGQTLNPYGT--GKDGMFVGGSSTGSAIAVAANFTVVSIG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D PDY LD + + G +G+ PK+Y Y + D K +++ Sbjct: 251 VDEKDVATRKSEGRAYPDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEKLFKET 307 Query: 289 ISWLKDAGAKIVEISLPHT-----QYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE H+ + +P Y E +L Y + + V Sbjct: 308 IQVLRNEGAAVVENIDIHSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ R + + YL AR D + EQ Sbjct: 362 ELMEFNKNMAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYGFEQ 480 >gi|330993512|ref|ZP_08317447.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter sp. SXCC-1] gi|329759542|gb|EGG76051.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter sp. SXCC-1] Length = 453 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 145/482 (30%), Positives = 228/482 (47%), Gaps = 75/482 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R+ SAV +V I IE +++ N+ ++ A A AE+ D+ + G D L G+ Sbjct: 14 VRAGRRSAVSVVTGVIADIEARDTRFNSVTRILGPAAVAQAEDVDRAVAAGRDPGPLAGV 73 Query: 75 PIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P G+KD F +G T A S +L D ++ V +L GAV + LNMDEFA G S Sbjct: 74 PFGVKDLFDVQGEVTTAGSIVLRDNLPASRDAAVVARLRAAGAVPVATLNMDEFAYGFST 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E ++ G +P GGSSGGS+A+VA L ++G+DT GSIR P+S G Sbjct: 134 ENAHTGTTRNP-----HDPACLAGGSSGGSAASVAAGLLPFALGSDTNGSIRVPSSLCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPTYG+ G+ F SLD G + TV D L+A+ Y Sbjct: 189 WGLKPTYGQVPLQGVYPFVASLDVVGPMASTVED----LQAV-----------------Y 227 Query: 254 ERALDQSIQGMT-VGIPKEYRL-DYLSPTIDKTWQQGISWLKD--AGAKIVEISLPHTQY 309 D+S + VG + RL + + I GI + G +++E LP Sbjct: 228 TIMADRSPMALPDVGSVRVARLGGWFASNISPEMAAGIDAVMAHLGGDRVIE--LPEVAR 285 Query: 310 ALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A + ++I+ AE + +L R LR+ RS+ + + R+M G Sbjct: 286 ARASAFLITAAEGGNLHLPR-------LRL------------RSMQYDPATRSRLMAGAM 326 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT----PTSAFPL----GKEE 420 + + + +++A++ R + EA Q DV++ P T P P GK Sbjct: 327 LPA-----ATFVQAQRFRRWFRARVHEALAQA-DVLVAPITVGVAPRIDQPAIIVDGKSV 380 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++G +FT +++ GLP ++VP A+ MPLG+QL+G P E+ LF+V + Sbjct: 381 SARANLG-----IFTQPISLTGLPVLAVPLAVA--GMPLGIQLVGAPGAEDRLFAVAAEL 433 Query: 481 EK 482 ++ Sbjct: 434 QR 435 >gi|228939224|ref|ZP_04101817.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972103|ref|ZP_04132719.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978715|ref|ZP_04139086.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis Bt407] gi|228780976|gb|EEM29183.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis Bt407] gi|228787587|gb|EEM35550.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820419|gb|EEM66451.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939801|gb|AEA15697.1| amidase [Bacillus thuringiensis serovar chinensis CT-43] Length = 491 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTEMESGQLTSKELVMYYLHRIAKYDQDGPEINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA SIG Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSIG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLIG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY + L+ + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVATHRSEGRAEQDYTKYLNVNGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I++P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENINIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIASTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|66045500|ref|YP_235341.1| amidase [Pseudomonas syringae pv. syringae B728a] gi|63256207|gb|AAY37303.1| Amidase [Pseudomonas syringae pv. syringae B728a] Length = 507 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 136/488 (27%), Positives = 224/488 (45%), Gaps = 40/488 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K +S VEL+D+ I+ IE+ N ++NA+ ++AR A +++ Sbjct: 5 SELLGKSATELRALIGNKQLSPVELLDACIERIESLNPKINAFAATCFERARDEALLAEQ 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+M+G Sbjct: 65 DVMQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIMVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLG 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + ++ R +D S + VG +++ + I +++ IS LK Sbjct: 239 QSDPLSYTIAADEFAPRPIDLS--QLRVGYSEDFGACAVDDRIRAVFREKISALKSLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I L +S +D +R V G L+ + G Sbjct: 297 CEAIDL----------------NLTSAHRTFDVLRAEAFVAG---LQDAHDCDPDALGPN 337 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 + +G + C +H ++R I R F + FE+ D+IL PTTP S FP Sbjct: 338 TRANFDMGAAMSLQDCVKAHGEQSR-----IFRGFQKQFEE-YDLILAPTTPVSPFPWSE 391 Query: 416 LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 L E N + + Y + + + PA+S+P MP GLQ+IG + L Sbjct: 392 LYLREVNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGGFRGDAKLL 451 Query: 475 SVGQIIEK 482 + IE+ Sbjct: 452 ACAAAIEQ 459 >gi|229109550|ref|ZP_04239140.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock1-15] gi|228673886|gb|EEL29140.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock1-15] Length = 491 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|229166963|ref|ZP_04294710.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH621] gi|228616591|gb|EEK73669.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH621] Length = 493 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 141/504 (27%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + + +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 15 LTIHDIQKEMEAGKLTSKELVMYYLHRIAKYDQEGPKINSILEINPDAIFIAEALDYERK 74 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + G++++GK Sbjct: 75 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGSIIIGKT 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 135 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDDMFVGGSSTGSAIAVAANFTVLSVG 192 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 193 TETDASILSPAVQNSVVGIKPTVGLISRSGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 252 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQG 288 DE D + DY LD + ++G +G+ PK+Y Y S D K +++ Sbjct: 253 VDEKDVATHKSEGMAYQDYTSYLDANGLKGAKIGVFSNAPKDY---YESGEYDEKLFKET 309 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L+ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 310 IQVLRSKGATVVEDIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 363 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ R + + YL+AR D + EQ Sbjct: 364 ELMEFNKNIAERALKYGQTKLER----KKDFPNTLRNPEYLKAR------LEDIYFSQEQ 413 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA + P Sbjct: 414 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAMPAGYMDNGRP 458 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ L F E L + E+ Sbjct: 459 FGITLASAAFSEGALIKLAYAFEQ 482 >gi|254244848|ref|ZP_04938170.1| hypothetical protein PA2G_05720 [Pseudomonas aeruginosa 2192] gi|126198226|gb|EAZ62289.1| hypothetical protein PA2G_05720 [Pseudomonas aeruginosa 2192] Length = 494 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 129/462 (27%), Positives = 214/462 (46%), Gaps = 42/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + A+ + A A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLAQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT GI T S + G P +++ V +++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y P+ R+ + GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 ----YNPLFGTTRNAYDPARIA-GGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNV 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ GR F L G + R+V D A LL AGYD C + + P Sbjct: 201 YGFRPSQGRVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRDDPR- 259 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYA 310 + L + +G +G +Y YL ++G+ L +A E+ + Sbjct: 260 RFADDLGRDFRGARLGWLGDY-AGYLP------MEEGVLELCEAALGDFAELGC-EVEAC 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV 369 LP Y + L R V V+G + E+Y + R + E + + G + Sbjct: 312 LPDYPL-------ERLWRTWLVHRQWLVQGS-LGELYADPARRVRLKPEAQWEVESGLGL 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGS 425 ++ Y RA R+ R FE+ D +L P+ FP E +G Sbjct: 364 GATEVY-----RASLDRSDWYRALARLFER-YDFLLLPS--AQVFPFDAETAWPRQVAGR 415 Query: 426 MGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 Y+ V + +AGLPAISVP +P+GLQ+IG Sbjct: 416 PMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLPMGLQIIG 457 >gi|218234507|ref|YP_002366778.1| amidase [Bacillus cereus B4264] gi|218162464|gb|ACK62456.1| amidase family protein [Bacillus cereus B4264] Length = 491 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLTKLPSTIPVHSIS 361 Query: 342 DILEMYEN--TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAVRALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|229043853|ref|ZP_04191550.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH676] gi|228725478|gb|EEL76738.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus AH676] Length = 491 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|229144698|ref|ZP_04273098.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-ST24] gi|296502676|ref|YP_003664376.1| amidase [Bacillus thuringiensis BMB171] gi|228638750|gb|EEK95180.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-ST24] gi|296323728|gb|ADH06656.1| amidase [Bacillus thuringiensis BMB171] Length = 491 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNAAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|330875265|gb|EGH09414.1| amidase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 495 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 140/479 (29%), Positives = 210/479 (43%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R ++ + L + + I+ N +NA+ +V A+ A A + G R L GI Sbjct: 39 VRKGCMTPIRLTELCLSIIKTHNPTLNAFGDVYAEAALEQAWTMTAELQRGKPRGPLHGI 98 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P GIKD F+T G+ T S P ++ + ++L GA++LGK EF ++ Sbjct: 99 PFGIKDLFSTAGLRTTRGSLTALDAVPAQDAPIIRRLKSAGAIILGKTATTEFGWTGAST 158 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW D T T GGSS GS+ AVA + A++G+D GGS+R P SF G Sbjct: 159 SRVFGNGRNPW---DPT--LTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIPGSFCGAF 213 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 +K T GR S L AG ITRTVRDSA+L ++G D D LP PD E Sbjct: 214 ALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLSGPDPLDHQA--LPAPD-E 269 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L + Q + K R+ Y D I+ +A + SLP T L Sbjct: 270 SFLARCDQPL-----KPLRIGYCPTLFDTPVDPQIAAAVEAAVATIARSLPVTVSTLTLD 324 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + A + G+ YG LE + GF + ++ SS Sbjct: 325 WQDPLATFETLWVAGRGIAYG------KALEQQLDQLDPGFAELIR----------SSAN 368 Query: 375 YD-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEENNSGSMG 427 YD YL+A + R FE D+++ PT P F P G +S ++ Sbjct: 369 YDLGDYLQAMQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAGQDS-ALP 426 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT N++G PA ++P + +P+GLQ++G F + + +E A + Sbjct: 427 WARWTPFTYPFNISGNPAANLPCGWSTEGLPIGLQVVGPRFADAHVLQFCAAVEAIAPW 485 >gi|257483515|ref|ZP_05637556.1| amidase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009597|gb|EGH89653.1| amidase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 515 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 140/491 (28%), Positives = 220/491 (44%), Gaps = 48/491 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + ++++V LV +Q IE N +NA IE+ + AA+ +R Sbjct: 42 FESGVELQRRMSAGNLTSVGLVTDLLQRIEVLNKNGPALNAVIEINPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI +KD T + T A + + G ++ V Q+L D GA+++GK Sbjct: 102 SRGEKRGPLHGIPILVKDNLDTGDQMQTTAGALSMVGLPAPRDAFVVQRLRDAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W S + P GSS GS+ +A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSSRGGQTRHPYDLSADPLGSSSGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G +G++PT G SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVIGLRPTLGLLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECDATC--VNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +G D D + V +Y L +++G +G P D + D +Q+ S L Sbjct: 276 SGNDPLDEATARASTDVVNYVDHLRTDALRGKRLGYPNHTH-DGMPMDDDPEFQKVKSRL 334 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 AGA +V + +P + Y++ + L Y R GL V D + + NT Sbjct: 335 SAAGAILVPVDVPSIDST--SEYLMLLHDFKRELNAYLSTRTGLGVSTLDDIIAF-NTAF 391 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G Q ++I + +S D YL I A Q +D +L Sbjct: 392 PG-AQAYDQDLLIDSSSVSVDQED--YLS-------IATSLRAAHRQLIDGLL------- 434 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +S + +++V AV +AG P I+VP L E +P GL + + E Sbjct: 435 -------QQHSLDVLIDWSEVSFKAVGAIAGYPGITVPVGLEENGLPRGLYFLSTAWDEG 487 Query: 472 TLFSVGQIIEK 482 L S +E+ Sbjct: 488 ALLSYAYALEQ 498 >gi|172061624|ref|YP_001809276.1| amidase [Burkholderia ambifaria MC40-6] gi|171994141|gb|ACB65060.1| Amidase [Burkholderia ambifaria MC40-6] Length = 490 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 130/479 (27%), Positives = 214/479 (44%), Gaps = 38/479 (7%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDAR-DL 71 D L+S+ ISA EL+D++++ I N ++NA + VV A RA A E D R G+ + L Sbjct: 29 DLLKSRQISACELLDAHLKRIAMINPRVNALVTVVDPDALRARARELDTRWARGEWQGPL 88 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ KD AT+G+ T S + P +++ + ++ GA+M+GK N EF GS Sbjct: 89 HGLPVSQKDLTATRGVRTTFGSTLFAEHVPQHDALIVRRCASAGALMIGKSNTPEFGAGS 148 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +G +PW D T GSSGG++AA+A + + G+D GGS+R PA++ Sbjct: 149 HTFNEVFGATRNPW---DLTRSAG--GSSGGAAAALACGMNPLACGSDMGGSLRNPAAWN 203 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG++P+ GR R ++ +L G + R V D+A+LL AIAG AT + P Sbjct: 204 NVVGLRPSPGRVPRAPDLNGWATLGVDGPMARDVADTALLLSAIAGPSGETATEIAEPGA 263 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + + L++ +GM + + + + P I +T G + VE P A Sbjct: 264 RFAQPLERDFRGMRIAMSRGLPGVPVDPEIRRTVDAQARVFTSLGCE-VEFDDPDLAEAE 322 Query: 312 PAYYIISPAEASSNLARYD-GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + I + + +D R L+ E D ++ + + G+ +V Sbjct: 323 DLFRIERAWLIGTLMDGFDERQRAALKPELHDEYRLHRSLSAADLGR---------MFVR 373 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSMGH 428 +R ++ AF Q + PTT F L + G Sbjct: 374 KTRLFER----------------MRAFMQRYAFYVLPTTQVMPFDAALRAPADVLGVEST 417 Query: 429 IYNDVFTVAVNMAGL--PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 Y D V ++ P +SVP +P+G+Q++G+ + + G E AG Sbjct: 418 TYIDWMRVCWLLSSTEAPILSVPCGFSAAGLPIGMQIVGRHRDDWGVLQFGHAYEVAAG 476 >gi|229127493|ref|ZP_04256485.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-Cer4] gi|228655950|gb|EEL11796.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus BDRD-Cer4] Length = 491 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLTKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|332668055|ref|YP_004450843.1| Amidase [Haliscomenobacter hydrossis DSM 1100] gi|332336869|gb|AEE53970.1| Amidase [Haliscomenobacter hydrossis DSM 1100] Length = 550 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 132/496 (26%), Positives = 225/496 (45%), Gaps = 73/496 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + V E + +RSK IS+ EL ++ ++ + Q++ + + + A A+ +D Sbjct: 117 ELAWYTVRELAELIRSKQISSEELTRFFLDRLKKYDPQLHCVVTLTEELAIEQAKRADAE 176 Query: 63 IINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP G KD A + T S Y++TV QKL GAV+ K Sbjct: 177 IKAGKYRGLLHGIPYGAKDLLAARKYKTTWGSVPFKDQVLDYDATVIQKLDAAGAVLCAK 236 Query: 122 LNMDEFAMGSSNETSYYGPVI-SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 L M E A G ++G + +PW + K GSS GS+++V+ L +IGT+T Sbjct: 237 LTMGELAWGDV----WFGEMTRNPWDT-----KTGSSGSSAGSASSVSAGLLPFAIGTET 287 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI P++ GT G++P+YGR SR G ++ + S+D+ G I R+V D AI+ +AI G D Sbjct: 288 LGSIVSPSTVCGTTGLRPSYGRVSRHGAMALSWSMDKIGPICRSVEDCAIVFQAIQGPDP 347 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW------QQGISWLKD 294 D + + Y+ D P++ ++ YL + + + +++ Sbjct: 348 MDVSLIPAAF-HYDANFD----------PRQLKIGYLKQDFARRYPFHDQDSVALQKMRE 396 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G K+V I LP + P II AE++ A +D L + G+D L M ++ Sbjct: 397 MGFKLVPIELPSS----PDLSIILSAESA---AAFD----ELTLSGRDDL-MRRQIKNAW 444 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + R + YL+A ++RT + ++ + F++ VDV + P+ + + Sbjct: 445 PNSFREARFIPAV----------EYLQANRLRTKLMQEMQKVFQE-VDVYINPSWGSRSL 493 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + N G P + +P + P L G+ F E + Sbjct: 494 NI---------------------TNHTGHPCVVIPNGFRNGR-PTSLTFTGKLFEEGKIL 531 Query: 475 SVGQIIEKEAGYFRPH 490 S+ +I ++ + + H Sbjct: 532 SLAKIYQEATEHHKQH 547 >gi|91065106|gb|ABE03938.1| peptide amidase precusor [Theonella swinhoei bacterial symbiont clone pSW1H8] Length = 505 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 156/520 (30%), Positives = 246/520 (47%), Gaps = 56/520 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAE 57 + E+ +V+ ++ + + SAVE ++Y++ IE + ++ + IEV AAE Sbjct: 7 LMEVQERSVAALQESMAQGESSAVEFCEAYLERIEEFDRAGPKLRSVIEVNPDALEIAAE 66 Query: 58 ESDKRIINGDARDLEGIPIGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 +R+ G L GIPI +KD + + T A S L+G ++ V +L GA Sbjct: 67 LDRERLERGPRGPLHGIPILVKDNIDSADRMMTTAGSLALEGNIAPRDAFVVSRLRAAGA 126 Query: 117 VMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 V+LGK N+ E+A +S +S G V +P+ ++D + P GSS GS A A L Sbjct: 127 VLLGKTNLSEWANFRSQRSTSGWSSRGGQVRNPY-ALDRS----PCGSSSGSGVAAAASL 181 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 AA++GT+T GSI P++ G VGIKPT G SR GI+ + S D AG + RTV D+A L Sbjct: 182 AAATVGTETDGSIVCPSAANGVVGIKPTIGLVSRSGIVPISHSQDTAGPMARTVEDAATL 241 Query: 232 LKAIAGYDECDATCVN--LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 L A+AGYD D DY LD+ ++G +G+ + Y + +D+ ++ Sbjct: 242 LTALAGYDPRDPVTQEGVGKEADYRTCLDEGGLEGARLGVARTYFGKH--ERVDEVIEEA 299 Query: 289 ISWLKDAGAKIV------EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-K 341 I L+ GA+IV ++SL + P I+ E ++L Y G RV + Sbjct: 300 IGRLEVLGAEIVDPVYVGDLSL----FMEPEREILH-YEFKADLNAYLAEHPGARVRNLE 354 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++ E R + + ++ +H + G LS + YL A+ + R TE ++ Sbjct: 355 EVIAFNEANADRVMPYFRQERHELAQGKGDLSEQA----YLEAKAECLRLAR--TEGIDK 408 Query: 400 GV-----DVILTPTT--PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 V D I+ PTT P +G + + G + MAG P I+VPA Sbjct: 409 AVREYRLDAIIAPTTTLPWLIDLIGGDRSPGGC---------SSPAAMAGYPHITVPAGY 459 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P+GL P+RE L E+ RP + Sbjct: 460 A-YGLPVGLSFFSGPYRECDLVRYAYAFEQATRVRRPPTY 498 >gi|323138401|ref|ZP_08073471.1| Amidase [Methylocystis sp. ATCC 49242] gi|322396348|gb|EFX98879.1| Amidase [Methylocystis sp. ATCC 49242] Length = 530 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 147/509 (28%), Positives = 228/509 (44%), Gaps = 48/509 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SE ++ ++E D LR++ ISA+EL D I IE+ + +NA + ++AR AA +D Sbjct: 39 SEWDYCTITELVDALRTRKISALELTDRAIARIESVDRSVNAVVVRDFERARDAARAADA 98 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ G+ R L G+PI +K+ F G+ T F P ++ V ++ + GAV+LGK Sbjct: 99 ALMRGETRALLGVPITVKESFDIAGLPTTWGDPRFRRFMPKEDALVVARVKNAGAVILGK 158 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ +G +PW + TPGGSSGGS+AA+A S+G+D G Sbjct: 159 TNVPLLLSDWQTYNDIFGTTNNPW-----DLRLTPGGSSGGSAAALACGFGPLSLGSDLG 213 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRL-----GIISFAPSLDQA--GIITRTVRDSAILLKA 234 GS+R PA + G KPT G R G FA D A G + R+ D A+ L Sbjct: 214 GSLRAPAHYCGVYAHKPTLGVVPRRGQTPPGTPPFARDSDLAVVGPMARSAADLALALDL 273 Query: 235 IAGYDECDATC---VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +AG DE A + LP P ++ +Q V + + L S + + Sbjct: 274 VAGPDEQRAGVGYRLALPAPRRDQ-----LQDFRVLVIDAHPLAPTSAVVRAALGRLTER 328 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L AG K+ H LP AE++ AR +G + ++ + Sbjct: 329 LVRAGVKVA-----HASPLLPDL-----AESARLYARLLSAYWGAGLPPREYARLGRKAS 378 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ + V+S R +L A R L+++ + E F + DV L P PT Sbjct: 379 TLAPDNRTLAAERMRGAVMSHR----DWLAAESERGLLQQQWRELFREW-DVALCPVMPT 433 Query: 412 SAFPLGKEENNSGSMGHI--------YNDVFTVAVNMA---GLPAISVPAALCEKKMPLG 460 AFP + ++ HI Y D TV +A GLPA + P E +P+G Sbjct: 434 PAFP--HDHSSPIEARHIRIDGESCSYLDAQTVWAELATTPGLPATAAPIDRSEHGLPIG 491 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +Q+IG + T + + +E+ G F P Sbjct: 492 VQIIGPHLEDRTTIAFARFLEQRFGGFAP 520 >gi|107100075|ref|ZP_01363993.1| hypothetical protein PaerPA_01001096 [Pseudomonas aeruginosa PACS2] gi|218893432|ref|YP_002442301.1| amidase [Pseudomonas aeruginosa LESB58] gi|218773660|emb|CAW29474.1| probable amidase [Pseudomonas aeruginosa LESB58] Length = 494 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 129/462 (27%), Positives = 214/462 (46%), Gaps = 42/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + A+ + A A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLAQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT GI T S + G P +++ V +++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y P+ R+ + GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 ----YNPLFGTTRNAYDPARIA-GGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNV 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ GR F L G + R+V D A LL AGYD C + + P Sbjct: 201 YGFRPSQGRVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRDDPR- 259 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYA 310 + L + +G +G +Y YL ++G+ L +A E+ + Sbjct: 260 RFADDLGRDFRGARLGWLGDY-AGYLP------MEEGVLELCEAALGDFAELGC-DVEAC 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV 369 LP Y + L R V V+G + E+Y + R + E + + G + Sbjct: 312 LPDYPL-------ERLWRTWLVHRQWLVQGS-LGELYADPARRVRLKPEAQWEVESGLGL 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGS 425 ++ Y RA R+ R FE+ D +L P+ FP E +G Sbjct: 364 GATEVY-----RASLDRSDWYRALARLFER-YDFLLLPS--AQVFPFDAETAWPRQVAGR 415 Query: 426 MGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 Y+ V + +AGLPAISVP +P+GLQ+IG Sbjct: 416 PMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLPMGLQIIG 457 >gi|297623399|ref|YP_003704833.1| amidase [Truepera radiovictrix DSM 17093] gi|297164579|gb|ADI14290.1| Amidase [Truepera radiovictrix DSM 17093] Length = 437 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 132/475 (27%), Positives = 215/475 (45%), Gaps = 65/475 (13%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 R+ + E+ +Y++ +E Y V A++A A ++ G D L+G+P Sbjct: 16 RAGALRPTEVTRAYLRRLEPGA----VYRAVSAERALEGARRAEALFAQGVDLGPLQGVP 71 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD T+G T A + +L P + ++L GAV LGK M E A Sbjct: 72 LALKDLMDTRGEVTAAGAKVLLERPPAAQDCPAAERLAAAGAVFLGKTTMTELAFSGLGL 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++G +P + D + PGGSS GS+ AVA L A+IG+DTGGS+R PA+F V Sbjct: 132 NPHFG---TPPNARDPSR--IPGGSSSGSAVAVASGLACAAIGSDTGGSVRIPAAFNNLV 186 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+K T G G + + +LD G IT+TV D+ LL+A+ G P P Sbjct: 187 GLKTTDGAVPMAGCVPLSTTLDTLGPITKTVEDAWHLLRALTGRP---------PAPFAP 237 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R S++G+ + P + L + + L+ AGA++ + LP Sbjct: 238 R----SVRGLKLLAPTTVLQEDLDEAVRGAFAGACERLQAAGARVTVLELPV-------- 285 Query: 315 YIISPAEASSNLARYDGV--RYGLRVEGKDILEMYENT---RSIGFGQEVKHRIMIGTYV 369 LA +G+ R+G + L +YE+ R+ F V RI+ Sbjct: 286 -----------LAELNGLYGRFG-SYAAMEALALYEDLLRERAGDFDPRVAARILASRGR 333 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENNSGSM 426 L+ + Y+R R+ ++R F A E G D +L PT P L +++ + Sbjct: 334 LA-----TDYIRLGYERSRLQRAFWRACE-GFDAVLAPTVAALPPKLADLAEDDAYFAAN 387 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + T N+ G+PA+SVP C + + GL + +P +E + +V + +E Sbjct: 388 ARVLRN--TTLFNLLGVPAVSVP---CGEMV--GLMIAARPHQEALVLAVAKGLE 435 >gi|320324670|gb|EFW80744.1| amidase family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 467 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 134/489 (27%), Positives = 207/489 (42%), Gaps = 46/489 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 4 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +P S T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNP-----SDPALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 179 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 237 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPH 306 P + DQ + + +G PT+ D I+ +A + SLP Sbjct: 238 APDESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPV 288 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG L + GF ++ Sbjct: 289 TVSTLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR----- 337 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 S++ S YL+A + R FE D+++ PT P F ++ Sbjct: 338 ----SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPF----AADDVAPA 388 Query: 427 GHIYND---------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 G++ D FT N+ G PA ++P +P+GLQ++G F + + Sbjct: 389 GYVGQDGAVPWARWTPFTYPFNITGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFC 448 Query: 478 QIIEKEAGY 486 +E A + Sbjct: 449 AAVEAIAPW 457 >gi|116052376|ref|YP_792687.1| amidase [Pseudomonas aeruginosa UCBPP-PA14] gi|313106868|ref|ZP_07793075.1| putative amidase [Pseudomonas aeruginosa 39016] gi|115587597|gb|ABJ13612.1| putative amidase [Pseudomonas aeruginosa UCBPP-PA14] gi|310879577|gb|EFQ38171.1| putative amidase [Pseudomonas aeruginosa 39016] Length = 494 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 129/462 (27%), Positives = 214/462 (46%), Gaps = 42/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + A+ + A A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLAQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT GI T S + G P +++ V +++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y P+ R+ + GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 ----YNPLFGTTRNAYDPARIA-GGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNV 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ GR F L G + R+V D A LL AGYD C + + P Sbjct: 201 YGFRPSQGRVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRDDPR- 259 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYA 310 + L + +G +G +Y YL ++G+ L +A E+ + Sbjct: 260 RFADDLGRDFRGARLGWLGDY-AGYLP------MEEGVLELCEAALGDFAELGC-DVEAC 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV 369 LP Y + L R V V+G + E+Y + R + E + + G + Sbjct: 312 LPDYPL-------ERLWRTWLVHRQWLVQGS-LGELYADPARRVRLKPEAQWEVESGLGL 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGS 425 ++ Y RA R+ R FE+ D +L P+ FP E +G Sbjct: 364 GAAEVY-----RASLDRSDWYRALARLFER-YDFLLLPS--AQVFPFDAETAWPRQVAGR 415 Query: 426 MGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 Y+ V + +AGLPAISVP +P+GLQ+IG Sbjct: 416 PMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLPMGLQIIG 457 >gi|30020191|ref|NP_831822.1| amidase [Bacillus cereus ATCC 14579] gi|29895741|gb|AAP09023.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus cereus ATCC 14579] Length = 491 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLTKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|134100823|ref|YP_001106484.1| amidase [Saccharopolyspora erythraea NRRL 2338] gi|133913446|emb|CAM03559.1| amidase [Saccharopolyspora erythraea NRRL 2338] Length = 506 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 155/523 (29%), Positives = 229/523 (43%), Gaps = 72/523 (13%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA--AEESDK 61 L ++E R L + +SAVELV ++ I+ N + V+ RA AEE D Sbjct: 12 LASAGIAELRSALAGRRLSAVELVGYHLDRIDRLNLRGPRLRAVLETDPRAVEIAEERDA 71 Query: 62 RIINGDARD-LEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G R L GIP+ +KD T G+ T + L G RP ++TV +L + GA++L Sbjct: 72 EQRRGQVRGPLHGIPVLVKDNLETAGGLRTTNGTTALLGARPERDATVVDRLIEAGAIVL 131 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N + GS ++ G +P+R D+ +P GSS GS+AAVA L A++GT+ Sbjct: 132 GKTNKSGWISGSGGWSARGGQGRNPYR----LDR-SPHGSSSGSAAAVAAGLGPAALGTE 186 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA G VG+KPT G SR G+I SLD G + R V D+A +L + G D Sbjct: 187 TIGSILGPAGVNGVVGLKPTVGLTSRAGMIPGVRSLDTVGPLCRNVADAATVLGVLTGVD 246 Query: 240 ECD---ATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D DY L+ + + G+ +G+P+E Y D + I L A Sbjct: 247 ERDPATGASAGRFRRDYLGCLEGAELSGVRIGVPRESFFGY-DDHADAVADEAIRVLAGA 305 Query: 296 GAKIVE----ISLP--------------HTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 GA IV+ SLP ++ + AY +P E ++A + Y Sbjct: 306 GAVIVDGADIPSLPRMLSEEGLMFAQLQEVKHHVDAYLAATPGEHPRSIAEL--IAYN-- 361 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEA 396 + T FGQE + LS D YL A +R L + + +A Sbjct: 362 -------REHAETEMPHFGQETLEMV----DALSGDLADPAYLSALATMRRLARDEGIDA 410 Query: 397 F--EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPA 450 E +D ++ PT + + H++ D + +AG PAISVPA Sbjct: 411 VMSEHRLDALVAPTG-----------GPAWKIDHVHGDPDARGSALVPGLAGYPAISVPA 459 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 + +P+G+ + + E L + E R H W Sbjct: 460 GAV-RGLPIGITFMAGAWSEPVLLRLAHAFE------RSHPAW 495 >gi|229115572|ref|ZP_04244978.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock1-3] gi|228667985|gb|EEL23421.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock1-3] Length = 491 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 143/513 (27%), Positives = 225/513 (43%), Gaps = 82/513 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + + + +S+ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIHDIQTAMEEGTLSSKELVMYYLHRIAQYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 I G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 IKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + TD GGSS G++ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GTDDMFVGGSSTGAAIAVATNFTVLSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA + VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQSSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY LD ++G +G+ PK+Y Y + D+ ++ Sbjct: 251 VDEKDVATHKSEGMAYEDYTSYLDVNGLKGAKIGVYSNAPKDY---YENGEYDENLFEDT 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYI-------------ISPAEASSNLARYD 330 I L+ GA +VE I +P H +++ +P Y + P + S L ++ Sbjct: 308 IQVLRSEGATVVENIDIPSFHREWSWGVPLYELKHSLDNYLSKLPSTIPVHSISELMAFN 367 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 K+I E R++ +GQ + G + + YL AR Sbjct: 368 ----------KNIAE-----RALKYGQTK----LEGRKDYPNTLRNPEYLHAR------L 402 Query: 391 RDFTEAFEQGVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 D + +QG+D L + FP + + + AG P+I++P Sbjct: 403 EDIYFSQKQGIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIP 447 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A E P G+ + FRE L + +E+ Sbjct: 448 AGYMENGRPSGITIASTAFREGILIKLAYALEQ 480 >gi|110833368|ref|YP_692227.1| amidase family protein [Alcanivorax borkumensis SK2] gi|110646479|emb|CAL15955.1| amidase family protein [Alcanivorax borkumensis SK2] Length = 473 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 131/483 (27%), Positives = 212/483 (43%), Gaps = 34/483 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL M+ + ++ +S VE+ ++ + IE + +NA+ + A ++++R Sbjct: 4 ELLTMSAQALKAAYQAGALSPVEVCNTLLDHIERHDEALNAWCLIDRDTTLQWARDAEQR 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLG 120 NG A L+G+P+ +KD F T T S +D S L +G V LG Sbjct: 64 YQNGTAEGLLDGVPVAVKDVFLTPMWPTLKGSKTIDPASTLEKRSPAVAALERHGYVPLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ GP +PW T GGSSGGS+AAV+ + ++GTD Sbjct: 124 KTTTPEFGWKGITDSPLCGPTNNPWDPSK-----TSGGSSGGSAAAVSAGMVPLALGTDA 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA F G VG KPT+ F +L AG +TR+V D+A+++ ++ D Sbjct: 179 GGSIRIPAGFCGIVGHKPTFSEVPHWPASPFG-TLAHAGPMTRSVADAALMMTVMSEADA 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ DY AL Q ++G+ + + ++P I+K ++ + GA + Sbjct: 238 RDSLAAPRRGIDYVAALQQPMKGLRIALSTTLGYVDVNPEIEKATREAARVFESLGATVS 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ P + +P A S+L Y G +R ++ E RS+ Sbjct: 298 EVD--------PGFS--NPLAAFSHLF-YSGAANAMR-------DLGERQRSL------M 333 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 ++ + + YL A R + F D+++TP P AF +E Sbjct: 334 DPALVEVASKAEKLSMLDYLGAMNERMAVSERMA-LFHTKYDLLITPCLPIEAFDTNREV 392 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + S FT NM G PA+SVP L +P+ LQ++G F + + + G Sbjct: 393 PVDWPSTRWPTWTPFTYPFNMTGQPALSVPLGLSSNGLPMALQIVGARFDDARVLAAGHA 452 Query: 480 IEK 482 E+ Sbjct: 453 FEQ 455 >gi|228920790|ref|ZP_04084130.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838901|gb|EEM84202.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 491 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 140/504 (27%), Positives = 226/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDHERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGVRGPLHGIPVLVKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S + ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFKMWAGYSARGGQTINPYGT--GKDGMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D++ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDASILLGSLIG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY + LD + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVATHRSEGRAEHDYTKYLDVNGLNGAKIGVFNAAPKDY---YENGEYDENLFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + + Sbjct: 308 IQVLRNEGATVVENIDIPSFHRKWSWGVPLY------ELKHSLDNYLSKLPSTIPIHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L +G E+ Sbjct: 457 FGITIASTAFSEGILIKLGYAFEQ 480 >gi|217076933|ref|YP_002334649.1| peptide amidase [Thermosipho africanus TCF52B] gi|217036786|gb|ACJ75308.1| peptide amidase [Thermosipho africanus TCF52B] Length = 460 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 139/492 (28%), Positives = 217/492 (44%), Gaps = 62/492 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V + D +++ LV+ Y++ I N +NA +E+ A A D+ NG Sbjct: 4 LTVKKFNDFYDEGKLTSERLVEFYLERISKIN--LNAILEINPD-ALFIARALDRERRNG 60 Query: 67 DAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R +L GIP+ IK T + T A + L+G ++ + +KL + G V++GK N+ Sbjct: 61 KKRSNLHGIPVIIKGNIDTNDKMQTTAGAKALEGNFASSDAFIVKKLREAGCVIIGKANL 120 Query: 125 DEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 EFA S + + G +P+ D+ GGSS GS+ A+A L SIGT+ Sbjct: 121 TEFANFVSFKMPNGYSRLGGQTRNPYGDFDT------GGSSSGSAVAIAADLALLSIGTE 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P+S VG+KPT G SR GII + + D AG ITRTV D+ L K I GYD Sbjct: 175 TSGSILSPSSMNSCVGLKPTVGTVSRTGIIPISFTQDTAGPITRTVEDAFELFKVIFGYD 234 Query: 240 ECDATCVNLPVPDYERALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + ++ ++ + GM G + ++++ + + + + ++ G Sbjct: 235 HKDPATYFIKNFSFDSKIEIIHDLYGMKFGYTDQI-FEWMNKELVDIFLENLKKIEKLGG 293 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEM-YENTRSIGF 355 K+ ++ + + + N D L+V+ DI++ +EN +I + Sbjct: 294 KVKKVEFKNLNKINNIEVLYYEFKLGINNYLKDK---NLKVKTLSDIIKYNFENRDAIPY 350 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHY----LRARKI-RTLIKRDFTEAFEQGVDVILTPTTP 410 GQ I Y ++ D Y L RK + I R F E +D +L P Sbjct: 351 GQN------ILLYSDATDIKDGRYIEYLLNDRKYAKGEIDRLFN---ENDLDALLFPA-- 399 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 N G+ HI A P+I VPA EK P GL + F E Sbjct: 400 -----------NYGA--HI--------TAKAQYPSIVVPAGFTEKG-PFGLTFSARAFEE 437 Query: 471 ETLFSVGQIIEK 482 LFS+ + EK Sbjct: 438 NKLFSIALLFEK 449 >gi|291008664|ref|ZP_06566637.1| amidase [Saccharopolyspora erythraea NRRL 2338] Length = 509 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 155/523 (29%), Positives = 229/523 (43%), Gaps = 72/523 (13%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA--AEESDK 61 L ++E R L + +SAVELV ++ I+ N + V+ RA AEE D Sbjct: 15 LASAGIAELRSALAGRRLSAVELVGYHLDRIDRLNLRGPRLRAVLETDPRAVEIAEERDA 74 Query: 62 RIINGDARD-LEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G R L GIP+ +KD T G+ T + L G RP ++TV +L + GA++L Sbjct: 75 EQRRGQVRGPLHGIPVLVKDNLETAGGLRTTNGTTALLGARPERDATVVDRLIEAGAIVL 134 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N + GS ++ G +P+R D+ +P GSS GS+AAVA L A++GT+ Sbjct: 135 GKTNKSGWISGSGGWSARGGQGRNPYR----LDR-SPHGSSSGSAAAVAAGLGPAALGTE 189 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA G VG+KPT G SR G+I SLD G + R V D+A +L + G D Sbjct: 190 TIGSILGPAGVNGVVGLKPTVGLTSRAGMIPGVRSLDTVGPLCRNVADAATVLGVLTGVD 249 Query: 240 ECD---ATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D DY L+ + + G+ +G+P+E Y D + I L A Sbjct: 250 ERDPATGASAGRFRRDYLGCLEGAELSGVRIGVPRESFFGY-DDHADAVADEAIRVLAGA 308 Query: 296 GAKIVE----ISLP--------------HTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 GA IV+ SLP ++ + AY +P E ++A + Y Sbjct: 309 GAVIVDGADIPSLPRMLSEEGLMFAQLQEVKHHVDAYLAATPGEHPRSIAEL--IAYN-- 364 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEA 396 + T FGQE + LS D YL A +R L + + +A Sbjct: 365 -------REHAETEMPHFGQETLEMV----DALSGDLADPAYLSALATMRRLARDEGIDA 413 Query: 397 F--EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPA 450 E +D ++ PT + + H++ D + +AG PAISVPA Sbjct: 414 VMSEHRLDALVAPTG-----------GPAWKIDHVHGDPDARGSALVPGLAGYPAISVPA 462 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 + +P+G+ + + E L + E R H W Sbjct: 463 GAV-RGLPIGITFMAGAWSEPVLLRLAHAFE------RSHPAW 498 >gi|228958372|ref|ZP_04120096.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801327|gb|EEM48220.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar pakistani str. T13001] Length = 491 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 142/513 (27%), Positives = 223/513 (43%), Gaps = 82/513 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 NG L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TNGVRGPLHGIPVLLKDNIETNDFMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+ ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDATILLGSLTG 250 Query: 238 YDECDATCVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTHKSDGRAYRDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYI-------------ISPAEASSNLARYD 330 I L++ GA +VE I +P H +++ +P Y + P + S L ++ Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLYELKHSLDNYLSKLPSTIPVHSISQLMEFN 367 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 K+I E R++ +GQ + G + + YL AR Sbjct: 368 ----------KNIAE-----RALKYGQTK----LEGRKDFPNTLRNPEYLNAR------L 402 Query: 391 RDFTEAFEQGVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 D + EQG+D L + FP + + + AG P+I++P Sbjct: 403 EDIYFSQEQGIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIP 447 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 A E P G+ + F E L + E+ Sbjct: 448 AGYMESGRPFGITIASTAFSEGILIKLAYAFEQ 480 >gi|146341000|ref|YP_001206048.1| amidase [Bradyrhizobium sp. ORS278] gi|146193806|emb|CAL77823.1| amidase [Bradyrhizobium sp. ORS278] Length = 504 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 113/425 (26%), Positives = 202/425 (47%), Gaps = 20/425 (4%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + +KD A G+ S L+GF P ++T+ ++ D G ++GK + F + Sbjct: 88 LAGRTVVLKDNVALAGVPMMNGSTTLEGFIPAADATIVTRILDAGGTIVGKAVCEHFCLS 147 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + TS PV +P + ++ GGSS GS+A VA SIG D GGSIR PAS+ Sbjct: 148 GGSHTSDPAPVHNPLKM-----GYSAGGSSSGSAALVAAGEVDMSIGGDQGGSIRIPASY 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+K T+G G++ ++D G +T V+D+A+LL+ +AG D D V Sbjct: 203 CGIYGMKATHGLVPYTGVMPIESTIDHTGPMTANVKDNALLLEVLAGADGLDPRQYAPKV 262 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y +L + ++G+ +G+ KE + + + + G GA + E+S+P + Sbjct: 263 AAYTESLGKGVKGLKIGVLKEGFSAPNMEQGVVSKVKAGAERFAKMGASVSEVSIPEHMH 322 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYEN--TRSIGFGQEVKHRIMIG 366 AL A+ I+ + +G+ + + + +L+ + TR+ +K +++G Sbjct: 323 ALAAWNPITLEGFLVQMMLGNGMGFNWKGLYDVGLLDAHSGWRTRADDLSVTLKLTMLVG 382 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + L +Y ++R I K + F D++L PT P A P+ ++ + Sbjct: 383 QWGL-EHYRGRYYAKSRNIAIAAKAAYDAVFGS-YDLLLMPTLPCVATPIPAKD---APL 437 Query: 427 GHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + F T ++ G PA+++P L + +P+GL LIG+ + E T++ E Sbjct: 438 AEVVQRAFEMTATTSPFDVTGHPAMTLPCGLSD-GLPVGLMLIGKDYAEATIYQAAAAFE 496 Query: 482 KEAGY 486 + + Sbjct: 497 ADGDW 501 >gi|296115571|ref|ZP_06834198.1| putative amidase [Gluconacetobacter hansenii ATCC 23769] gi|295977820|gb|EFG84571.1| putative amidase [Gluconacetobacter hansenii ATCC 23769] Length = 470 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 130/472 (27%), Positives = 211/472 (44%), Gaps = 40/472 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ FM+ +E +S VE+V + ++ IE + ++NA +EV A+ A +A ++ Sbjct: 5 EIGFMSAAELMVHYERSRLSPVEVVAAVLRHIEATEPKINAMVEVTARHAMDSARRAEAA 64 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R LEG+P+ IKD T I T+ S P ++ +L + GAVMLGK Sbjct: 65 YRAGMNRRLEGVPVTIKDLQETANIPTRYGSWSRKDNVPTVDAPCVTRLHEAGAVMLGKT 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EF +++ G +PW++ + G SS G+ AA A G D G Sbjct: 125 TVPEFGWKGVSQSPLTGVTSNPWKA-----GYNAGASSAGAGAAAAAGYGPLHQGGDGAG 179 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA F G G+KPT+GR IS G +TRTV+D+A++L+A++G D Sbjct: 180 SIRMPAHFCGVFGMKPTHGRIPNWP-ISNNDLATHMGPLTRTVKDAALMLEAMSGPHPWD 238 Query: 243 ATCVN-LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 T + P+P Y L ++G + + + P + +S + GA + E Sbjct: 239 YTSLEAAPLP-YSTMLSAPLKGRRIAYSPDLGHARVDPDVAAAVAAAVSVFEGMGATVEE 297 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDG-VRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++ PA+ P LAR+ Y + E + + +E + Sbjct: 298 VT--------PAWGPKGP-----ELARFFWPATYSAKCTLLSEWEPLMDPGLVAMIRETQ 344 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R M + AR+ R + E F Q D +LTP +AFP + + Sbjct: 345 GRTM------------QEFTLAREKRFAYAVEIHEFFTQW-DFLLTPAASVAAFPATQLQ 391 Query: 421 NNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 ++ H ++ + F+ N AG PA S+P +P+GLQ++G+ F Sbjct: 392 PDTWPR-HDWDWLGWAEFSYPFNWAGNPAASIPCGFGADNLPVGLQVVGRRF 442 >gi|228907812|ref|ZP_04071665.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis IBL 200] gi|228851814|gb|EEM96615.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis IBL 200] Length = 491 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 143/504 (28%), Positives = 228/504 (45%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDHMFVGGSSTGSAIAVASNFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTG 250 Query: 238 YDECDATC---VNLPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D + DY LD + + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVVTRKSEDRAYRDYTFYLDANGLNGAKIGVFNDAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ +K + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQ-IK---LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|320105721|ref|YP_004181311.1| Amidase [Terriglobus saanensis SP1PR4] gi|319924242|gb|ADV81317.1| Amidase [Terriglobus saanensis SP1PR4] Length = 462 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 136/484 (28%), Positives = 215/484 (44%), Gaps = 59/484 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGD 67 ++++ L ++++ L D ++A+ + + + V + AR A+E D R G Sbjct: 15 IAQTLQCLARGEVTSRSLTDDCLRAVADPQGEGKRTFTRVYEESARTTADEVDLRRSEGV 74 Query: 68 -ARDLEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A L G+PI IKD F G T + S +L D ++ V +L GAV++G+ NM Sbjct: 75 VAGPLAGLPISIKDLFDVAGETTLSGSTVLADAPSATADAAVVSRLRQAGAVLIGRTNMT 134 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA +YG +P D PGGSS G++ +V+ + AA++G+DTGGSIR Sbjct: 135 EFAYSGLGLNPHYG---TPKNPYDRATGRIPGGSSSGAAVSVSDGMAAAAVGSDTGGSIR 191 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G G KPT R S G++ +P+LD G+I TV A++ +AG AT Sbjct: 192 IPAALCGLTGFKPTARRVSMEGVLPLSPTLDSIGVIAPTVACCALVDAVLAG----QATI 247 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 LP P + GM G+ + + LD + + + + +S L AGAK+ ++ Sbjct: 248 TLLPGP---------LSGMRFGVLRGFVLDGMEDEVARAFYTALSTLSKAGAKVEDLYFG 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A +P + + +++L M+ + + V RI Sbjct: 299 SLDRVPGANQFAAPEAFAWH---------------RELLAMHGDR----YDPHVAIRIRH 339 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G V Y YL IRT I R+ FE G D +L PT P A + E + + Sbjct: 340 GAGV-----YACDYLDLFTIRTEIMREAARTFE-GFDAVLLPTVPCIAPAIATLEASDDA 393 Query: 426 MGHIYNDVFTVAVNMAGL------PAISVPAALCEK--KMPLGLQLIGQPFREETLFSVG 477 Y D + L A+S+P C + + P+GL + G + + VG Sbjct: 394 ----YFDANGAVLRNPSLFNYLDGCALSIP---CHRPGEAPVGLMVAGLGGWDARILRVG 446 Query: 478 QIIE 481 IE Sbjct: 447 AAIE 450 >gi|148254038|ref|YP_001238623.1| amidotransferase (amidase) [Bradyrhizobium sp. BTAi1] gi|146406211|gb|ABQ34717.1| amidotransferase (amidase) [Bradyrhizobium sp. BTAi1] Length = 477 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 144/483 (29%), Positives = 219/483 (45%), Gaps = 49/483 (10%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIP 75 R++ +S VE+V + + I ++NA+ ++ A A AAA+ S+ R G+ L +G+P Sbjct: 32 RARTLSPVEVVRAVLDRIARLEPRINAFAKLDADAALAAAQASEARWQRGEPVGLVDGVP 91 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD KG T S +D + E S T +L + GAV+LGK EF + Sbjct: 92 AALKDLVLAKGWPTLRGSRAVDPAQDWSEDSPATARLREQGAVLLGKTTTSEFGWKGLGD 151 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G +PW TPGGSSGGS+AA A + TD GGS R PA+ +G Sbjct: 152 SPLTGITRNPW-----NPAHTPGGSSGGSAAAAAIGFGPLHVATDGGGSTRLPAAHSGVF 206 Query: 195 GIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KP++GR + + PS L +TR+V+D+A+LL IA D D LP Sbjct: 207 GFKPSFGR-----VPVYPPSQNGTLFHVTPLTRSVQDAALLLDVIARPDARDFHA--LPA 259 Query: 251 PD--YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D ++ LDQ ++G+ + + P +++ GA VE+ P + Sbjct: 260 QDISWQAGLDQGVEGLRIAFSPTLGYASIDPEVERIVADAAKAFARLGA-TVELVDPGIE 318 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 + A A+ + +D R L +G + ++ E RSI Sbjct: 319 DPFDIFQTFWFAGAAKLVQSFDPERRALIEQG--LQDVAEKGRSID-------------- 362 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMG 427 V+S YL+A R + R F F Q D++LTPTT AFP E + + + Sbjct: 363 VVS-------YLKAVDRREALGRHFGR-FHQDWDLLLTPTT---AFPASAIEASQADLVA 411 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 FT N+ PA SVPA L +P+GLQ+IG F + + + E+ + Sbjct: 412 RPIRSPFTYPFNLTQQPAASVPAGLIAAGLPVGLQIIGAKFADALVLRAARAFEQARPFS 471 Query: 488 RPH 490 RP Sbjct: 472 RPR 474 >gi|259418170|ref|ZP_05742089.1| amidase [Silicibacter sp. TrichCH4B] gi|259347076|gb|EEW58890.1| amidase [Silicibacter sp. TrichCH4B] Length = 443 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 130/490 (26%), Positives = 228/490 (46%), Gaps = 60/490 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + M+ ++ + + +I V L ++Y+ AI++ Y +V ++A A+ + Sbjct: 1 MQDWLTMSAAQLGRGIAAGEIDPVALTETYLAAIDSHPETAQIYTKVTRERALFEAKAAQ 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R +G R L+G+P+ KD F + G+ T++ S +L G P +++ V + G+V L Sbjct: 61 ERAKSGLRRSPLDGVPLSWKDLFDSAGVETESGSDLLKGRVPDHDALVLENATALGSVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMD---STDKFTPGGSSGGSSAAVAGFLCAASI 176 GK +M E A + G ++P ++ + + PGGSS G++A+VA L A +I Sbjct: 121 GKTHMSELA--------FSGLGLNPIKATPPCVNDPEAVPGGSSSGAAASVAFGLAAGAI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+DTGGS+R P+++ VG+K T GR S G++ D G + RTV D+A++L I Sbjct: 173 GSDTGGSVRIPSAWNDLVGLKTTSGRVSLEGVVPLCLKFDTIGPLARTVEDAALMLALIE 232 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G + PD A +++G + D L+P + + L++ G Sbjct: 233 G---------SATAPDLRGA---TVEGKRFADLQTVAQDNLAPEVASAHAAALDELREGG 280 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A+IV + +P A+ I+ EA YGL KD++E + Sbjct: 281 AEIVPLEVPELPDAMALSAILFTTEA-----------YGLW---KDVIEAAPDL----MF 322 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 E+ R G S Y + + + ++R + + G D +L P P L Sbjct: 323 PEILARFRSGAE-FSGADYVAAWAKLEQVRMVWDQAVA-----GFDAVLAPAAPILPPNL 376 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +++ + ++ + N T N+ G+ A+S+P GLQ+IGQP EE Sbjct: 377 ARLQSDHDYYVTSNLMALRN---TRIGNLMGVCALSLPTGTPS----CGLQVIGQPDCEE 429 Query: 472 TLFSVGQIIE 481 L +G +E Sbjct: 430 ALLRIGAGVE 439 >gi|164690692|dbj|BAF98642.1| putative glutamyl-tRNA amidotransferase subunit A [Streptomyces argenteolus] Length = 534 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 142/475 (29%), Positives = 218/475 (45%), Gaps = 27/475 (5%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG-IH 88 Y+ I + ++A + + R A + SD+R G LEGIP+ +KD T G + Sbjct: 70 YLNRIRTVDPLLHAVMATNPRGLREAVQ-SDQRRRRGAHGSLEGIPVLLKDNIDTAGQLR 128 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 T A S L RP ++ + Q+L GAV+LGK N+ E+A S+ +S + + Sbjct: 129 TTAGSLALLDSRPARDAFLVQRLRAAGAVILGKANLSEWANFRSSPSSSGWSAVGGQANN 188 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 P GSS GS+ AVA L A +IGT+T GSI PA G VG+KPT G SR G+ Sbjct: 189 PYVLDRNPCGSSSGSAVAVAASLAAVTIGTETDGSIVCPAGINGVVGVKPTLGLVSRAGV 248 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD-QSIQGMTVG 267 + + + D AG ITR V D+A +L I G D D V DY RAL ++ G +G Sbjct: 249 VPLSLAQDTAGPITRNVTDAAAVLSVIQGVDPRDPATVPGGERDYLRALKPDALVGKRIG 308 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYA----LPAYYIISPAEA 322 + + + + T ++ L+ GA +VE I L A PA + Sbjct: 309 VWRSAAGG--NQEVLATLDAAVATLRAKGATVVENIELAGMDQAGEAEFPALMTEFKHDM 366 Query: 323 SSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 + LA G R+ + G + + + +T FGQEV + T L+ + Y Sbjct: 367 NVYLAETPG-RHPADLAGLIEFNKRHASTELRHFGQEVFEQSQATTGDLN----NPEYRA 421 Query: 382 ARKIRTLIKRDFTEAFEQG--VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVA 437 R+ T + R ++ G +D +L PT A+P S + G + D + Sbjct: 422 LREKATSLARKAIDSVVAGNRLDAVLAPTN-NGAWP------TSLTKGDDFTDFVASSAP 474 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 ++G PAI++P + +PLG+ G E TL ++G E+ +P + Sbjct: 475 AAVSGYPAITIPGGYAKNVLPLGVTFFGGRLSERTLIALGYAFEQAGQVRKPPTY 529 >gi|163854593|ref|YP_001628891.1| amidase family protein [Bordetella petrii DSM 12804] gi|163258321|emb|CAP40620.1| amidase family protein [Bordetella petrii] Length = 597 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 132/473 (27%), Positives = 210/473 (44%), Gaps = 52/473 (10%) Query: 21 ISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 +S+ LV +Y++ + + Q +NA + R A E +R L GIP+ Sbjct: 18 LSSQALVRAYLRRVAAYDQQGPALNAIAALHPDALRQARELDAERAAGRLRGPLHGIPVL 77 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD F G+ T A + L + P E+ V ++L GAV+LGK + E A G N +S Sbjct: 78 VKDNFHVAGLPTSAGTLALADWGPGPEAGVVRRLRAAGAVILGKTTLHELACGIINISSL 137 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +P+ PGGSSGG++AAVAG AA +G+DT GSIR PA+ VG++ Sbjct: 138 TGQTRNPY-----APGRAPGGSSGGTAAAVAGSFAAAGLGSDTSGSIRVPAAANNLVGLR 192 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPVPDY 253 PT G SR GI+ + + D G + R+V D A+LL AI G D D +LP + Sbjct: 193 PTRGLASRAGIVPLSETQDTPGPLARSVPDLALLLDAIVGVDADDPATARAARSLPRSFH 252 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPT------IDKTWQQGISWLKDAGAKIVEISLPHT 307 + + G+ +G+ LD L T + + + ++ ++ GA + + +P Sbjct: 253 DALRPDGLAGLRIGV-----LDALFGTLPGEEDVSRVAYEALAAMERLGASLAGVDIPML 307 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEM---YENTRSIGFGQEVKHRI 363 LP ++P E A + + G V G DIL +E ++ ++ R Sbjct: 308 AALLPGSS-LTPYEFRHAFANHLAAQGGAPVSGLADILRQGLHHEQLDAV-----LRQRE 361 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTL--IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + S R + L +KR GVDV+ P Sbjct: 362 ALRDDDGSGRAAVLRVRNRLRRAVLACMKR-------HGVDVLAYPAL----------RC 404 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 S+G + + G+PA+S+PA +P+GL+L+ + E+ L Sbjct: 405 RPASIGDVQAGANSQLAAATGMPALSLPAGFTRDGLPVGLELLARDHAEQQLL 457 >gi|330984723|gb|EGH82826.1| amidase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 515 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 140/491 (28%), Positives = 218/491 (44%), Gaps = 48/491 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++V LV +Q IE N +NA IE+ + AA+ +R Sbjct: 42 FESSVELQRRMSAGSLTSVGLVTDLLQRIEVLNKNGPALNAVIEINPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI +KD T + T A + + G ++ V Q+L D GA+++GK Sbjct: 102 SRGEKRGPLHGIPILVKDNLDTGDQMQTTAGALSMVGLPAPRDAFVVQRLRDAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W S + P GSS GS+ +A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSSRGGQTRHPYDLSADPLGSSSGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G +G++PT G SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVIGLRPTLGLLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECDATC--VNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +G D D + V +Y L ++ G +G P D + D +Q+ S L Sbjct: 276 SGNDPLDEATARASTDVVNYVDHLRTDALSGKRLGYPNHTH-DGMPMDDDPEFQKVKSRL 334 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 AGA +V + +P + Y++ + L Y R GL V D + + NT Sbjct: 335 SAAGAILVPVDVPSIDST--SEYLMLLHDFKRELNAYLSTRTGLGVSTLDDIIAF-NTAF 391 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G Q ++I + +S D YL I A Q +D +L Sbjct: 392 PG-AQAYDQDLLIDSSSVSVDQED--YLS-------IATSLRAAHRQLIDGLL------- 434 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +S + +++V AV +AG P I+VP L E +P GL + + E Sbjct: 435 -------QQHSLDVLIDWSEVSFKAVGAIAGYPGITVPVGLEENGLPRGLYFLSTAWDEG 487 Query: 472 TLFSVGQIIEK 482 L S +E+ Sbjct: 488 ALLSYAYALEQ 498 >gi|40311106|emb|CAF03723.1| amide hydrolase [Rhodococcus sp. BH2-N1] Length = 471 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 126/490 (25%), Positives = 220/490 (44%), Gaps = 43/490 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI----EVVAQKARAAAE 57 SE+ + + SE R+R + ++ VE+ D+ I+ I+ N +NA + E V + AR+ Sbjct: 4 SEIVWASASELAARVRERSLTPVEIGDAMIEHIDAVNPSINAVVQFDREQVQRDARSLNA 63 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 + +K + G L G+P IKD G+ T + ++ V ++L G + Sbjct: 64 QVEKGQVLG---PLHGVPFTIKDMTPVAGLPTTFGMRPMRDNMASADAVVVKRLRAAGGL 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGK N E + YGP +PW+ T GGSSGG++AAVA + + G Sbjct: 121 FLGKTNTPESGYYGGTDNHLYGPTHNPWKH-----DHTAGGSSGGAAAAVAAGIGPIAEG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GS+R P++ G VG+KPT G + + G ITRTV D+A++L +AG Sbjct: 176 SDGAGSVRIPSAMCGVVGLKPTTGVIPQTLLAGRYYDWVYHGPITRTVADNALMLDVLAG 235 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + + Y +LD G+ V + L+++ P + + ++ D GA Sbjct: 236 PDPADPLSTDRTINSYVASLDGDDDGLRVAYSPDLGLEHIDPEVASVCRDALTVFDDIGA 295 Query: 298 KIVEISLPHTQYALPAYYII-SPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 +VE + + ++ ++ + P AS +L + +R + ++++ E+ ++ Sbjct: 296 HVVEATPAWGKPSVSMWHALWVPGFASEHDLCDWPSLRGEVDDNFIELMKEGESLTAVDV 355 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G RA R + +T F DV+++PT ++AFP Sbjct: 356 G------------------------RAEVFRGQMWDTWT-TFMNDYDVLVSPTLASAAFP 390 Query: 416 LGKEE----NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 L + + I + + T NM PAI++PA P+GLQ+ + R++ Sbjct: 391 LSQFAPSWLDGKSLREQILDWLLTYPFNMLNNPAITIPAGFTSDGRPVGLQIAARHRRDD 450 Query: 472 TLFSVGQIIE 481 L + E Sbjct: 451 LLLRIASKFE 460 >gi|256423262|ref|YP_003123915.1| amidase [Chitinophaga pinensis DSM 2588] gi|256038170|gb|ACU61714.1| Amidase [Chitinophaga pinensis DSM 2588] Length = 475 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 120/483 (24%), Positives = 209/483 (43%), Gaps = 59/483 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +R +DIS VE++ +++ IE N +NA + +A A A++++ ++ G+ L G+ Sbjct: 23 IRDRDISPVEVMKAHLDRIEAFNPAINAIV-TIADNAMEVAKKAENAVLRGNELGPLHGV 81 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD T I TQ S I G P ++T ++ G ++L K N+ EF+ ++ Sbjct: 82 PFTVKDSIDTANILTQRGSPIFKGRIPDSDATSVARMKQAGGILLAKTNIPEFSYWIESD 141 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +PW TPGGSSGG SAA+A + +GTD S+R PA+ TG V Sbjct: 142 NLLSGRSNNPWDL-----SRTPGGSSGGESAAIAAGMSPIGLGTDLAISVRGPAAQTGIV 196 Query: 195 GIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +K T+GR GI P G + R++RD I ++G D D + Sbjct: 197 SLKATHGRVPMTGIWPRVPRRFWHVGPMARSIRDLQIAFGVLSGPDGLDGFSSS------ 250 Query: 254 ERALDQSIQGMTVGIP-KEYRLDYL--------SPTIDKTWQQGISWLKDAGAKIVEISL 304 + + G IP ++ R+ ++ + KT + LK G + + + Sbjct: 251 ----NYLLNGGVGSIPDRKLRIGWMVGPGFGPVDSEVIKTVEAAADALKSLGLLVEPVGI 306 Query: 305 PHTQ--YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR--SIGFGQEVK 360 P + +AL + + ++EM + R + G QE Sbjct: 307 PALERDFALDVFNRLH------------------------VMEMKKAFREATAGRSQEEL 342 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 +++ L + ++ A + +K F F + D +LT P A G E Sbjct: 343 YKMSKTMLSLPDTSMED-FIDAEQAAERLKDGFAGYFSK-YDALLTHVLPVPAHKHGVES 400 Query: 421 N--NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + Y TV +N+ GLP I++ ++ +P+ +Q++G E T+ + Sbjct: 401 FIINGQKVDPTYLQGATVPLNITGLPGIAMRFGTSKEGLPIAVQIVGSWLNESTILHIAS 460 Query: 479 IIE 481 ++E Sbjct: 461 LLE 463 >gi|293603200|ref|ZP_06685633.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Achromobacter piechaudii ATCC 43553] gi|292818431|gb|EFF77479.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Achromobacter piechaudii ATCC 43553] Length = 472 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 145/498 (29%), Positives = 220/498 (44%), Gaps = 42/498 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ F + E D L S+VEL ++ I +N + AY+ V + A AE +D Sbjct: 1 MSEIAFATLGELADGLAEGRYSSVELTQHFLDRIAQANPALGAYVSVDSDGALRLAEAAD 60 Query: 61 KRIINGDA--RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R G L+G+P+ +KD +G T A S R +T +L D G V+ Sbjct: 61 ARRRAGYGLLSPLDGVPVAVKDLCDIQGQTTTAGSQAWRERRSSVTATAVTRLLDAGMVI 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK +M EFA G G +PW D PGGSS GS VA L A++G+ Sbjct: 121 LGKTHMVEFAFGGWGTNPLMGTPRNPW---DLQAPRIPGGSSSGSGVVVAAGLAPAALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA+ G G+K T G S G ++ + +LD G +TR RD+ +L +AG Sbjct: 178 DTGGSVRIPAALNGVTGLKTTRGLISLHGAVALSTTLDSIGPLTRDTRDAMLLTALMAGA 237 Query: 239 DECDATCVNLPVPDYER--ALDQSIQGMTVGI--PKEYRLDYLSPTIDKTWQQGISWLKD 294 D D N P Q ++G+ + + P ++ + + L D Sbjct: 238 DPQDPLTQNQPAFQLREPGTSAQPLRGVRIALMPPSQHPIS-VEADALTALDAARRVLID 296 Query: 295 AGAKIVEISLPHT--QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 GA + E P + L II+ AEA Y L +D +E + + Sbjct: 297 LGADVAETPFPFDFHEMMLRNGQIIA-AEA-----------YALH---RDYIE--DPAQP 339 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 I GQ V+ R++ G V ++ + + A+ R A+ + +D +LTP P Sbjct: 340 I--GQYVRARVLSGKGVSAADYIAALHAHAQ------ARQAWLAWMRDIDAVLTPCAPFG 391 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 A L + + + FT A N +++PA +PLG+QL+G+P E T Sbjct: 392 ARLLADVDEAATPLA-----AFTRAGNYVNASGLALPAGFTASGLPLGIQLLGKPNAEGT 446 Query: 473 LFSVGQIIEKEAGYFRPH 490 L +G + + R H Sbjct: 447 LGMIGMAFQAVTDWHRRH 464 >gi|291009926|ref|ZP_06567899.1| secreted amidase [Saccharopolyspora erythraea NRRL 2338] Length = 469 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 143/499 (28%), Positives = 233/499 (46%), Gaps = 48/499 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + + + ++R+ +++V L +Y++ I + + A + R AA SD R Sbjct: 1 MVTIPQLQERMARGSLTSVSLTAAYLRRIRAVDPVIGAVLRTDPAALRQAAA-SDLRHRT 59 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L+GIP+ +KD T+ + T A S L G P ++ + +L + GAV+LGK N+ Sbjct: 60 GAVRGPLDGIPVLLKDNVDTRDLPTTAGSLALAGRPPRDDAALVTRLREAGAVVLGKTNL 119 Query: 125 DEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E+A + TS + V R+ D+ P GSS GS+AAVA L +IGT+T GS Sbjct: 120 SEWANFRAEKPTSEWSAVGGQTRNPYVLDR-NPCGSSSGSAAAVAASLAQVAIGTETDGS 178 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 I PA G VG KP+ G S G++ + D AG + R V D+A+ L + G D Sbjct: 179 IVCPAGMNGVVGHKPSLGLVSGDGVVPISSEQDTAGPMARNVVDAALTLSVLRGDRAGDP 238 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 PVP ++G +G+ +RL L P +D + + AGA++VE++ Sbjct: 239 P---RPVP---------LRGKRIGL---WRLPSLGPDVDAVMTRAAERFRAAGAEVVEVA 283 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR------SIGFGQ 357 LP+ + +E ++ Y R G R D+ E+ E R + GQ Sbjct: 284 LPYQDRLAELEFPALLSEFHRDIDAYLATRDGPR----DLAELVEFNRTHPQEQTCFAGQ 339 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFP 415 E+ R+++ + D YL R ++ L R E +D I +P P P Sbjct: 340 ELFERVLV-----APATTDPGYLAMRAELDELSARSIDETMTAHRLDAIASPANP----P 390 Query: 416 LGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + G NDV + +AG P++SVPA ++P+GL L+ +++ L Sbjct: 391 AWTTDCVRGD-----NDVIPSSTPAAVAGYPSVSVPAGFV-GELPVGLLLMAGDRQDQAL 444 Query: 474 FSVGQIIEKEAGYFRPHKW 492 ++ E+E G +RP ++ Sbjct: 445 LALAAAAERELGAWRPPRY 463 >gi|163796327|ref|ZP_02190288.1| Amidase [alpha proteobacterium BAL199] gi|159178469|gb|EDP63011.1| Amidase [alpha proteobacterium BAL199] Length = 451 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 129/469 (27%), Positives = 203/469 (43%), Gaps = 52/469 (11%) Query: 22 SAVELVDSYIQ-AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIK 79 SA L+++ ++ A + + ++ + ARA AE SD G A R LEG+PI IK Sbjct: 22 SATALLETALERAADPAGEGARVFVHQMVDTARAEAEASDGLRRAGVAPRPLEGLPISIK 81 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F +G T A S +L P ++ + +L GAV++G+ NM EFA + Sbjct: 82 DLFDVRGHVTTAGSKVLADEPPAEVDAPIVARLRAAGAVLVGRTNMTEFAFSGIGINPHN 141 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW D + PGGSS G++ +VA + IG+DTGGS+R P+ G G KP Sbjct: 142 GTPANPW---DRDTRRIPGGSSSGAAVSVADGMATVGIGSDTGGSVRIPSGLCGLAGFKP 198 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T R +G + +P+LD G + TV +A + + +AG PV R Sbjct: 199 TQRRVPTVGACALSPTLDSIGPLAPTVACAARVHQVMAGE----------PVRPIGR--- 245 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 +S+ G+ +P+ L+ L T + ++ +S L AGA I EI IS Sbjct: 246 RSVAGLRFAVPQSLVLEDLDGTTAQCFEAALSRLSAAGAVITEIPFKE-------LLAIS 298 Query: 319 PAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 A A A + R + D+ + R G++ S+ Y Sbjct: 299 EANAKGGFAAVECYELHSRHVIRAPDLFDPRVVVRIRRAGEQ------------SAVDYI 346 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 + R +I+ A D +L PTT A P+ + E + + N++ + Sbjct: 347 TLVRRRAEIQAACN-----AVTAPFDAVLMPTTARIAPPIAELEASDEAFAK--NNILML 399 Query: 437 ----AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N A +VP P+GL L+G+ ++ L SV +E Sbjct: 400 RNCSVGNFLDRCAATVPVQE-PGSAPVGLMLMGETMGDDALLSVSAAVE 447 >gi|45658238|ref|YP_002324.1| 6-aminohexanoate-cyclic-dimer hydrolase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601480|gb|AAS70961.1| 6-aminohexanoate-cyclic-dimer hydrolase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 500 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 142/499 (28%), Positives = 219/499 (43%), Gaps = 64/499 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R K I +ELV+S IQ IE N +NA I ++AR + S ++ NG R G+P Sbjct: 26 VRKKLIHPIELVESAIQRIETINPGLNAVITRFYEEAR---KTSKSKLPNGPFR---GVP 79 Query: 76 IGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD + G C S + +S ++L G + LG+ N+ EFA+ E Sbjct: 80 ILVKDMVHSIGGAPLTCGSKAFRNYISPQDSEFIKRLRKTGTIFLGQTNVPEFALMGITE 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YGP +PW + TPGGSSGGS+AAVA + + +D GGSIR PA + G Sbjct: 140 PKLYGPTRNPWNL-----ERTPGGSSGGSAAAVASGMVPVATASDGGGSIRIPAGYCGLF 194 Query: 195 GIKPTYGRC---SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KPT GR G S+D I++R+VRDSA L A+ G ++ A P Sbjct: 195 GLKPTRGRTPVGPNFGRFWQGASVDH--ILSRSVRDSAAFLDALCGIEKSGAFSFEEPKT 252 Query: 252 DYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 +Y + +S + + + + + P ++ Q L G K+ E P A Sbjct: 253 NYLSEIKKSTGKLKIAFSTQSPIGTKVHPDCVESVIQTAKLLHSLGHKVEEKDAPIDGKA 312 Query: 311 LPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + +I + E ++ L + + G +V D+ + T +G + I G +V Sbjct: 313 IGRSFITMYFGEVAAQLKSLETI-LGRKVRMNDVEPV---TWILGL---LGRTISGGEFV 365 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS---- 425 L+ + +D L E F + DV LTPTT +G+ E G Sbjct: 366 LNLQEWDKAALA------------METFHETYDVYLTPTTAMPPSKIGELEPKLGEKIAM 413 Query: 426 --MGH--------------------IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +GH + FT N+ G P++S+P + ++PLGL Sbjct: 414 QIVGHLGLGKILFASGLVDELVEKSLSRTPFTQLANLTGQPSVSIPLSQTSDRLPLGLLF 473 Query: 464 IGQPFREETLFSVGQIIEK 482 RE+ LF + +EK Sbjct: 474 TAARRREDILFRLSSQLEK 492 >gi|150377185|ref|YP_001313780.1| amidase [Sinorhizobium medicae WSM419] gi|150031732|gb|ABR63847.1| Amidase [Sinorhizobium medicae WSM419] Length = 473 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 129/493 (26%), Positives = 208/493 (42%), Gaps = 65/493 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + + + +RS+ ISAVE+ ++ I + + + + A AA + D Sbjct: 1 MTVLETLPIRKLAAMVRSRKISAVEVTSYFLNRIMAFDDAICGFNVPAPETAMGAARDLD 60 Query: 61 KRIINGDARDLEG-IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K++ G IP+ IKD G+ + S G ++TV ++ G + L Sbjct: 61 KQLAAGGEAGALAGIPLSIKDIADVAGLPSAGASASRAGRMASTDATVVARMKIAGGIAL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E A G + Y P +PW + D+F PGGSS GS VA LC S+ TD Sbjct: 121 GKANCHELAFGGPSFDLPYPPARNPW----NRDRF-PGGSSSGSGVTVAAGLCLGSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PA+ G G+KP GI A ++D G + RT D+ IL +AG Sbjct: 176 TAGSIRLPATMCGVFGLKPGRDTLPLDGIAVLAATMDHVGPVARTADDTRILFDVMAGRS 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWLKD 294 P P S+ G+ +G+P + D+ + P + + I + Sbjct: 236 ---------PGP----PCSGSLHGLRIGVPSD---DWGVGSLMHPDVQTGLESAIDVARS 279 Query: 295 AGAKIVEISLPHT-QYALPAYYI----ISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 GA+IV + LP + PA + I+ A+S A +D Sbjct: 280 EGAEIVPLELPSLDDFHAPATILMMAEIAAEHAASVRAAWD------------------- 320 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 FG + R ++G + + Y A ++R ++ R +A VD +L Sbjct: 321 ----KFGAIFRARALVGEGITA-----EDYRLAERLRPVLTRRLFDAISS-VDCLLVAGA 370 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 PL + S + + + N G PA++ PA + + MP+G+Q++G P Sbjct: 371 LAPPGPLASVD----SFYFMKEPIPNIVANYTGFPALAFPAGVSSEGMPIGVQIMGVPGS 426 Query: 470 EETLFSVGQIIEK 482 E L + + E+ Sbjct: 427 EHRLLDIAENYER 439 >gi|315643960|ref|ZP_07897130.1| Amidase [Paenibacillus vortex V453] gi|315280335|gb|EFU43624.1| Amidase [Paenibacillus vortex V453] Length = 640 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 144/487 (29%), Positives = 230/487 (47%), Gaps = 39/487 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 ++E + + + +++V LV Y+ I + Q++A + V + AA + ++R G Sbjct: 168 IAEMQTAMEQRKVTSVTLVQLYLARIHRYDDQLHAILTVNDKAVEAARKLDEERRTTGPR 227 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI +KD + T + T A L P +S +L GA+++ K N+DEFA Sbjct: 228 GPLHGIPIIVKDNYDTADMPTTAGCVCLKDSIPDNDSEQVARLKAAGAIIIAKANLDEFA 287 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + +S G ++P+ PGGSSGG+ AA+A AA +GTDTGGSIR P+ Sbjct: 288 FNITTSSSLGGQTLNPYNL-----GHYPGGSSGGTGAAIAANFAAAGLGTDTGGSIRIPS 342 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S VGI+PT G SR GII A + D G + RTV D+A +L+A AGYD D Sbjct: 343 SLNSLVGIRPTIGLSSRDGIIPLALTQDVGGPMARTVADAAAVLEATAGYDAKDLVTTQS 402 Query: 249 --PVPD-YERALD-QSIQGMTVGIPKEYRLDYLSPT------IDKTWQQGISWLKDAGAK 298 VPD Y LD + +QG +G+ + LS T ++ + + ++ GA Sbjct: 403 VGRVPDSYLSYLDKEGLQGARIGVVTQ----LLSGTKAEQNEVNDITLKAVKDMEKLGAT 458 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 V I +P+ + A+ + +S E L Y L G+D + I G+ Sbjct: 459 AVHIEIPNYE-AIMKFPSLSGWEFKFQLNDY------LESLGEDA-PYHSLEEIIASGEY 510 Query: 359 VK-HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD--FTEAFEQGVDVILTPTTPTSAFP 415 ++ H+ + D+ Y + RT + ++ E +D ++ P + A Sbjct: 511 LESHKSSMEARQARETLDDNEYRKIVLDRTKLTQESLLKVMAEHNLDALVYPASAEPAGK 570 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 LG E NSG + +G PAI+VPA + +P+G++ +G+ F E TL Sbjct: 571 LG-EGQNSGVNNRLS--------PFSGFPAITVPAGFTDGGLPVGVEFLGKAFDEGTLIK 621 Query: 476 VGQIIEK 482 + E+ Sbjct: 622 LAYSYEQ 628 >gi|327310744|ref|YP_004337641.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermoproteus uzoniensis 768-20] gi|326947223|gb|AEA12329.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermoproteus uzoniensis 768-20] Length = 450 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 140/469 (29%), Positives = 218/469 (46%), Gaps = 50/469 (10%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLE 72 D +R VE+V + A + S +NAYI ++ A AE K + G D L Sbjct: 25 DEVRRGVADPVEVVSRSLDAAKRY-SHLNAYITLLDDVAMERAESLRKALRRGLDRGRLF 83 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD T+G+ T S I + P + V L GAV++GK N+ EFA G S Sbjct: 84 GVPVSLKDNILTRGVRTTMGSRIFQSYVPAINARVVDVLESQGAVVVGKANLHEFASGVS 143 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N++S GP +P D + S A+ S+GTDT GS+R PA+ G Sbjct: 144 NKSSVAGPARNPH---DPSRISGGSSGGSAVSVAIGS--AYISVGTDTSGSVRIPAALCG 198 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPTYG G+ A +LD G++ R++ D A L A+ G + D Sbjct: 199 VVGYKPTYGLIDIWGVFPLAWTLDTVGVLARSISDIAYFLYAVTG--DLDYVV------- 249 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + D I+ +T+G + LD + ++K IS L G I IS+ Y + Sbjct: 250 -RISTDLDIRKITIGYLE---LDE-NNKVEKYIMDIISKLDSEGYNIRRISINIESY-IE 303 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 +I AEAS+ + R E+Y R + + +V + I G Sbjct: 304 TQRVIRLAEASA-IHR----------------ELYREYRDL-YSPDVANLIEQGF----- 340 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + YL A++ R+++ + + F + VD ++TPT P A P+ E+ + + + Sbjct: 341 KYSAVDYLAAQRSRSILTQSYRSVF-KSVDAVVTPTVPVVAPPI--EQLDEMAFRALATR 397 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 TVA N+ G PA+S+P L E +P+GLQL+G + L ++ + IE Sbjct: 398 YTTVA-NLVGSPALSLPVGLVE-GLPVGLQLLGDVGHDAELLAIAKSIE 444 >gi|320328780|gb|EFW84779.1| amidase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 497 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 134/489 (27%), Positives = 207/489 (42%), Gaps = 46/489 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 34 VIEAAALVRKGCMTQIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 93 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 94 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 153 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +P S T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 154 GWTGASTSRVFGNGRNP-----SDPALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 208 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 209 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 267 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPH 306 P + DQ + + +G PT+ D I+ +A + SLP Sbjct: 268 APDESFLARCDQPLSPLRIG---------FCPTLFDTPVDAQIASAVEAAVGNIARSLPV 318 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 T L + A + G+ YG L + GF ++ Sbjct: 319 TVSTLKPNWQDPLATFETLWVAGRGIAYG------KALAQQLDQLDPGFADLIRR----- 367 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 S++ S YL+A + R FE D+++ PT P F ++ Sbjct: 368 ----SAQYSLSDYLQALQQRAAFANQVHALFED-YDLLIMPTLPILPF----AADDVAPA 418 Query: 427 GHIYND---------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 G++ D FT N+ G PA ++P +P+GLQ++G F + + Sbjct: 419 GYVGQDGAVPWARWTPFTYPFNITGNPAANLPCGWSSGGLPIGLQVVGPRFADAQVLQFC 478 Query: 478 QIIEKEAGY 486 +E A + Sbjct: 479 AAVEAIAPW 487 >gi|288960635|ref|YP_003450975.1| 6-aminohexanoate-cyclic-dimer hydrolase [Azospirillum sp. B510] gi|288912943|dbj|BAI74431.1| 6-aminohexanoate-cyclic-dimer hydrolase [Azospirillum sp. B510] Length = 487 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 131/476 (27%), Positives = 203/476 (42%), Gaps = 51/476 (10%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +R+++ +++ +E +D I +E N +NA +E + + AR E+ R +GD G Sbjct: 22 ERIQAGEVTPLEALDDAIARLERVNPTLNAVVEPLFETAR----ETASRRTSGDG-PFAG 76 Query: 74 IPIGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P IKD F G S + + R ++ Q+L G V+ G EF + Sbjct: 77 VPTFIKDLFMPVAGARMTNGSRLFEPVRAPVDADFVQRLRQAGIVIAGTTTSPEFGTSFA 136 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+ +G +PW + TPGGSSGG+SA VA + + G D GGS+R PAS G Sbjct: 137 TESQLFGATRNPW-----SPDHTPGGSSGGASALVAARVVPFAYGNDGGGSLRVPASCCG 191 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQ--AGI-----ITRTVRDSAILLKAIAGYDECDATC 245 G+KPT GR + P + + AG+ IT +VRDSA LL A AGY D Sbjct: 192 VFGLKPTRGR------VPLGPMIGEGWAGMGVTHAITLSVRDSAALLDATAGYSAGDPYA 245 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P + A+ + + + +G+ + P + + G ++ E LP Sbjct: 246 APTPDGRFLDAVTRPPKPLRIGLVRSLAPWPTHPDCLAAVDHSVRLCESLGHRVEETELP 305 Query: 306 HTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + A + I A+ + +L G G R + +LE TR + K + Sbjct: 306 VSAADFYDAIFTIIGAQ-TRHLLEVVGAMTG-RPADESVLE--PRTRVL---LRAKGGVS 358 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 Y + DS + R++ L R DV+LTPT +G + Sbjct: 359 GAAY---AAAVDSIHALGRRMAGLFGR---------FDVLLTPTLAKPPVTIGALDMEDT 406 Query: 425 SMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 D+F T N G PA+SVP + +P+G Q PF EE+L Sbjct: 407 QTLPELIDLFHSFSPITPLFNATGQPAMSVPLHWNDAGLPIGTQF-AAPFGEESLL 461 >gi|322831654|ref|YP_004211681.1| amidohydrolase, AtzE family [Rahnella sp. Y9602] gi|321166855|gb|ADW72554.1| amidohydrolase, AtzE family [Rahnella sp. Y9602] Length = 467 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 129/488 (26%), Positives = 219/488 (44%), Gaps = 39/488 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + VS+ + +ISA E+ S + A+E +N +NA+ ++ + + A + D Sbjct: 1 MKSFDSFTVSQLHQAIAQGEISATEIATSTLDAVEQANPVINAWTQITGDRMLSEAAKVD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVM 118 K +G L GIP +K+ G T A + + +++ +L GA++ Sbjct: 61 KSRASGAVLPPLAGIPYAVKNLLDVAGEVTLAGASLNSSNAAARHDAWTVSRLAAQGAML 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G LNMD +A G + E S+YG +P R + + GGS+ +A + F ++G+ Sbjct: 121 SGMLNMDAYAYGFTTENSHYGATRNP-RDLARVAGGSSGGSAAAVAAGLVHF----TLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR P+S +G +G+KPT+GR SR G F SLD G + R D + + AI G Sbjct: 176 DTNGSIRVPSSLSGILGLKPTFGRISRRGSQPFVASLDHIGPMARCSEDLSQVYDAIQGT 235 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + PV + L + QG+ + Y S D + + + A A Sbjct: 236 DPQDHFQADKPVTETFSQLKRGQQGLRSAVLG----GYFSLWCDDHAKAAVHRIAQALAA 291 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 EI +P A A +IIS +E G +Y ++ + I E +E Sbjct: 292 QEEIEMPQAGLARSAAFIISASEG--------GNQYLPKL--RSIPEQFEPLS------- 334 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R++ G + + + Y++A++ R ++ F+ D+++ P TP A LG+ Sbjct: 335 -RERLLAGAMIPA-----AWYVQAQRFRQQFQQQILPLFDHW-DILIAPATPCPATLLGQ 387 Query: 419 EE---NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E N + T ++ GL + +P+GLQLI P+RE+ Sbjct: 388 ETIRINGQDLPTRANMGMLTQPISFLGL-PVVTVPVTTSTGLPIGLQLIAPPWREDLCLR 446 Query: 476 VGQIIEKE 483 +E++ Sbjct: 447 AAWALEQQ 454 >gi|256854657|ref|ZP_05560021.1| amidase [Enterococcus faecalis T8] gi|256710217|gb|EEU25261.1| amidase [Enterococcus faecalis T8] gi|315030659|gb|EFT42591.1| amidase [Enterococcus faecalis TX4000] Length = 482 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 135/525 (25%), Positives = 222/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKLNGFVTFDSQKAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|209546175|ref|YP_002278065.1| hypothetical protein Rleg2_5792 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539032|gb|ACI58965.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 456 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 126/442 (28%), Positives = 186/442 (42%), Gaps = 41/442 (9%) Query: 44 YIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP- 101 + + +A A A S KR+ G + L +GIPI KD F +G+ T A S +L P Sbjct: 44 FTTLTESRAMAEARASSKRLREGRSLGLLDGIPIAWKDLFDIEGLATTAGSVVLAADAPA 103 Query: 102 HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSG 161 ++ V L G V +G+ NM EFA +YG ++P R D PGGSS Sbjct: 104 KRDAAVVGFLRQAGMVAIGRTNMSEFAFSGLGINPHYGTPVNP-RGNDLPR--IPGGSSS 160 Query: 162 GSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGII 221 G+ AVA L ++GTDTGGS+R PA+F G VG K T GR + G+ A SLD G Sbjct: 161 GAGVAVAAGLVPVAMGTDTGGSVRIPAAFNGIVGYKATRGRHAMDGVYPLARSLDSLGPF 220 Query: 222 TRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI 281 R V+D+ + DA PD +++ +Q + + +P+ D P + Sbjct: 221 CRGVKDAVWI----------DAAMRGRIAPDV---VERPLQALELLVPENIVFDGAEPGV 267 Query: 282 DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 ++ G+ L+ AG + +P A A + + RYG V + Sbjct: 268 IAAFEAGLERLQRAGVHVARAVIP----AFDAIFDLM-------------TRYGPLVTAE 310 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +E + HR+++ T L SR + YL + R + D G Sbjct: 311 AFALHHERLAGPD-ADRMDHRVVMRTR-LGSRTSLADYLAILEARKRMIADVERLV--GD 366 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPL 459 ++ PT A P+G E + N T N +S+P MP+ Sbjct: 367 RLLAFPTVAHVAPPIGPLEGDDELFFATNNKTLRNTALGNFLDWCGVSIPCGTGASGMPV 426 Query: 460 GLQLIGQPFREETLFSVGQIIE 481 GL L R+ETL V E Sbjct: 427 GLLLSATARRDETLLGVALAAE 448 >gi|46310119|gb|AAS87339.1| putative mandelamide hydrolase [uncultured gamma proteobacterium] Length = 495 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 139/504 (27%), Positives = 229/504 (45%), Gaps = 53/504 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++E+ R+R +S+ +LV++++ I + Q+NA+I V A A+ D+ + G Sbjct: 25 LTLTEASARIREGKVSSRKLVEAFLARIADY-PQLNAFISVDPAAALDQADAYDRYLGEG 83 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+PI +KD G A + L + P + + L GA+++GK NM Sbjct: 84 GVPLPLGGLPIAVKDSIHVIGFANTAGTPALANYYPTRNADIVDALLKAGAIVVGKTNMH 143 Query: 126 EFAMGSSN-ETSYYGP-VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E A G+S T+++ P V+ + D T GSS GS +AV L A++GTDTGGS Sbjct: 144 ELAFGTSGYNTAFHSPGVVGVRNAFDPTRIAG--GSSSGSGSAVGARLVPAALGTDTGGS 201 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +RQP++ G VG +PT GR S G+ +P+ D G + R+V D L I G A Sbjct: 202 VRQPSALNGCVGFRPTVGRYSTEGVTPVSPTRDTPGPMARSVEDVITLDTIITGAQPIAA 261 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + + +G+ E+ D LS + ++ L+ +G ++V +S Sbjct: 262 PAAS---------------SIRLGVINEFWAD-LSEPVQALALAALNKLEQSGVQLVRLS 305 Query: 304 LP-----HTQYALP-AYYIISPAEASSNLARYDGVRY-GL--RVEGKDILEMYENTRSIG 354 P ++ ++P A + PA GV + GL + D+ ++E G Sbjct: 306 DPEIFALNSAVSMPLALHECRPALTDYLSVNETGVSFDGLVAAISSPDVRSIFEQHIVPG 365 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V G V Y + +R TLI R T +D ++ PTTP A Sbjct: 366 HLGNVN-----GQPVDLEGAYTAAIKHSRP--TLIGRFDTLFKAHQLDALIHPTTPDLAI 418 Query: 415 PLGKEENNSGSMGHIYNDVFTVAV------NMAGLPAISVPAALCEKK-MPLGLQLIGQP 467 K E ++ D F + + AG+P IS+P L EK+ +P+G+++ G P Sbjct: 419 ---KSEPDAARF-----DAFARMIRNADPASNAGMPGISLPIGLSEKEGLPVGIEIDGLP 470 Query: 468 FREETLFSVGQIIEKEAGYFRPHK 491 + L S+ +IE P++ Sbjct: 471 GTDARLLSIALLIESIVEPVTPYR 494 >gi|27381524|ref|NP_773053.1| indole acetimide hydrolase [Bradyrhizobium japonicum USDA 110] gi|27354692|dbj|BAC51678.1| indole acetamide hydrolase [Bradyrhizobium japonicum USDA 110] Length = 471 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 148/493 (30%), Positives = 231/493 (46%), Gaps = 43/493 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L+ + V E+ +RS +++A L + ++ + S++NA++ + A + AAA +D Sbjct: 3 MKNLHELGVVEAAAAIRSGEVTAEALASALLER-ARTFSRLNAFVTLDADQVMAAARRAD 61 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G A L G+PI KD T + T A + L RP ++ V + L GA+ Sbjct: 62 QQRQAGQALGSLHGVPIAFKDNINTADMPTTAGTPGLRAHRPRTDAPVVKALKAAGAIPF 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E A G S+ S +G + +P+ D+ PGGSSGGS AAV L ASIG+D Sbjct: 122 GKTGMHELAFGISSNNSAFGAIRNPF-----GDRHIPGGSSGGSGAAVGARLVPASIGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA+F G G +PT R S+ GI+ + + D AG + R A+ L A+ Sbjct: 177 TGGSVRVPAAFCGVAGFRPTVLRWSQAGIVPISSTRDTAGPLAR----HAVDLAALDAAV 232 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 DA PVP + + + +G+P+ + D L + + LK AG + Sbjct: 233 TSDAN----PVP------MKQLSDLRIGVPRSFFWDDLERETASMCEADLDVLKRAGITL 282 Query: 300 VEISLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGF 355 +E+ L H AL + ++ E +L Y LR EG E+ + S Sbjct: 283 IEVDL-HEVAALNKAVSFTVALYEVKRDLDAY------LRDEGIAPRFAEIVADVASPDV 335 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + + T V ++ + K+ +L + F E VD I+ PTTP Sbjct: 336 KAGLAPLLNPATAVPVEAYREAIDVHRPKLISLYRACFA---ENKVDAIVFPTTPLPPPL 392 Query: 416 LGKEENNSGSM-GHIYNDVFTVAVNM-----AGLPAISVPAALCEKKMPLGLQLIGQPFR 469 +G EN+S ++ G TV N AGLP IS+P L +P+GL+ R Sbjct: 393 IG--ENDSVTLNGRAVPTFATVIRNTDPGSNAGLPGISLPVGLTSAGLPVGLEFDAPAGR 450 Query: 470 EETLFSVGQIIEK 482 + L S+ +E+ Sbjct: 451 DRELLSLAIALEQ 463 >gi|121998754|ref|YP_001003541.1| amidase [Halorhodospira halophila SL1] gi|121590159|gb|ABM62739.1| Amidase [Halorhodospira halophila SL1] Length = 470 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 142/472 (30%), Positives = 203/472 (43%), Gaps = 55/472 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + SE R RS +S VE ++ + I N +NA+ V AAA +++R +N Sbjct: 11 LTASELLRRYRSGSLSPVEATEAALARIRAHNETVNAFCLVDETTTLAAARRAEQRYLNT 70 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 +L+G+P+ IKD F T+G S +D P ++ L +G V LGK Sbjct: 71 SPMGELDGVPVAIKDVFLTRGWPNLKGSKTVDPAGPWEQDAPAVSALRRHGFVPLGKTTT 130 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E + YG +P+ DK G S G +S+ V G + ++GTD GGSI Sbjct: 131 PELGWKGVTDCPCYGVTRNPF----DPDKTAGGSSGGSASSVVLG-MGPLALGTDAGGSI 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F+G VG KPT GR F L G +T TV D+A L+ IA D D T Sbjct: 186 RIPAGFSGLVGHKPTQGRVPLWPASPFG-QLAHPGPMTWTVEDAARLMNVIAETDPRDPT 244 Query: 245 CVNLPVP--DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LP DY AL + G+ V + I ++ + + GA++ E+ Sbjct: 245 ---LPAAGGDYVAALAGGVGGLRVAFSPNLGYVQVDAEIARSVAEAARMFEALGARVEEV 301 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKH 361 P + P EA +L + G LR + + EM + I V+ Sbjct: 302 D--------PGF--ADPREA-FDLLFFGGAANALRSIPEERHAEM--DPCLIEAAGSVRD 348 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIR-TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 M+ YL A R LI+R T F Q D++LTPT P AF G+E Sbjct: 349 ASML------------DYLAAMNERAALIER--TSLFHQQYDLLLTPTLPIPAFTAGREV 394 Query: 421 NNSGSMGHIYND-------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 ++D FT NM G PA SVP + +P+GLQ++G Sbjct: 395 PEG------WHDPRWPSWTPFTYPFNMTGQPACSVPCGFTGQGLPIGLQIVG 440 >gi|91789150|ref|YP_550102.1| amidase [Polaromonas sp. JS666] gi|91698375|gb|ABE45204.1| Amidase [Polaromonas sp. JS666] Length = 431 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 121/463 (26%), Positives = 212/463 (45%), Gaps = 55/463 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 + A L+ + I+ ++ + A++ ++ AA E R+ L+G+P+ +KD Sbjct: 20 LDATTLLADTLARIDAQDAALGAFVALLNP---GAAREQLGRLQEAGG-PLQGLPVAVKD 75 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 F T G+ T S + G +P ++ + + G +++GK + EFA T Sbjct: 76 IFDTAGLPTSYGSALYAGAQPRCDAAIVSVIRRAGGLVIGKSSTTEFAFLHPTAT----- 130 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 R+ ++ + TPGGSS GS+AAVA L ++GT TGGS+ +PAS+ G G KP++ Sbjct: 131 -----RNPNAPGR-TPGGSSAGSAAAVAAGLVPFAVGTQTGGSVIRPASYCGVTGFKPSF 184 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 G G+ F+ SLD G+ R V D A +A++G+ + LP A Sbjct: 185 GLLPTAGLKCFSWSLDTVGLFARNVADVAWFAQAVSGH------ALALPAAQATPA---- 234 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 + VG+P Y +SP+ + + G L+ AGAK++ I+LP ++ Sbjct: 235 -KSWVVGVPDSYPWGPVSPSAQRAIEAGSQALRAAGAKVLGITLPA--------WMKDVH 285 Query: 321 EASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 EA + Y+ R +++ ++ ++ + +I +S+ Y++ Sbjct: 286 EAQDVIQGYE----AWRALAREVDQLARQPEAL---STILRDYLITASRISAPAYEAAQQ 338 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 AR+ R F + DV++TP+ P A P GS G + +F A + Sbjct: 339 TARQGRQACADWFGQ-----FDVLMTPSAPDEAPP------GYGSTG---SSMFNRAWTL 384 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 GLP ++V A+ P+GLQ+IG P + ++E+ Sbjct: 385 LGLPCVNVAGAVGVNGFPMGLQVIGAPHADRACLEAADVLERS 427 >gi|229178488|ref|ZP_04305854.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus 172560W] gi|228604996|gb|EEK62451.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus 172560W] Length = 491 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 141/504 (27%), Positives = 225/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQDGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK Sbjct: 73 TKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSAKGGQTINPYGT--GKDHMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D++ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDASILLGSLIG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY + LD + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVATHRSEGRAEHDYTKYLDVNGLNGAKIGVFNAAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHRKWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|87311711|ref|ZP_01093827.1| hypothetical protein DSM3645_06669 [Blastopirellula marina DSM 3645] gi|87285605|gb|EAQ77523.1| hypothetical protein DSM3645_06669 [Blastopirellula marina DSM 3645] Length = 517 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 131/511 (25%), Positives = 221/511 (43%), Gaps = 66/511 (12%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 D S E+VD + IE N Q+NA + + AR A+E DK + L G+PI IK Sbjct: 18 DFSVTEVVDQHALRIEQVNPQINAVVYSLLDTARKTAQELDKAGRPSEPGPLHGVPITIK 77 Query: 80 DCFATKG-------IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +C+ +G H Q+ S + Q+L GA+ LG N+ + + Sbjct: 78 ECYYVQGAPATIGLTHKQSISQ--------RDGAHVQQLRSAGAIPLGVTNVPQLMILHE 129 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + YG +PW GGSSGG +A +A +G+D GGSIR PA F G Sbjct: 130 TDNPVYGRTNNPWNLEHGV-----GGSSGGEAAIIAAGGSPLGLGSDLGGSIRLPAHFCG 184 Query: 193 TVGIKPTYGRCSRLGIISFAPSLD----QAGIITRTVRDSAILLKAIA----GYDECDAT 244 G+KPT R +R+G ++ + Q G + R V D + L+ ++ G+ D Sbjct: 185 VHGLKPTNRRLARIGAVANLRGMQGVEYQPGPLARHVEDLELALRVLSSADYGWRNADVG 244 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 C L R+ + + +G ++ +P I + ++ ++ L++ GA++VE+S Sbjct: 245 CAPL-----ARSSEVDFTQLRIGYWEDDGYFQAAPAIRRVVRESVAALRECGAEVVELSP 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRI 363 P+ AL Y+ + A+ + + ++ G + E I+ + + R I R Sbjct: 300 PNVPAALQHYFAMVSADGGDDFRQL--LKGGKQDAEVARIVRLAQTPRWIRPLMAALLR- 356 Query: 364 MIGTYVLSSRCYDSHYLRARKI--RTLIKRDFTEAFEQ-----GVDVILTPTTPTSAFPL 416 M G L+ + A+ + T +F + +Q +D ++TP AF Sbjct: 357 MRGEKKLADLFVAAGPRSAKSLWKATAASLEFVASIQQSWDDANIDAVITPPHALPAFLH 416 Query: 417 GK--EENNSGSMGHIYN------DVFTV----AVNMAGLPAISVP-------AALCEKKM 457 G E S S ++N V T A ++ +S P L + + Sbjct: 417 GMAVELLPSASYALLFNLLGGPCGVVTCSQVGADELSDRTDLSDPVERSAQRVELASRGL 476 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 P+GLQ+ +P+RE+ + + I+ K YFR Sbjct: 477 PVGLQVAARPWREDQVLA---IMSKVESYFR 504 >gi|186685085|ref|YP_001868281.1| amidase [Nostoc punctiforme PCC 73102] gi|186467537|gb|ACC83338.1| Amidase [Nostoc punctiforme PCC 73102] Length = 467 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 137/491 (27%), Positives = 214/491 (43%), Gaps = 56/491 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESDK 61 +L F E +R +++S +ELV+ Y++ IE N Q+ +Y V A+ A A A+ +++ Sbjct: 5 DLAFTPALELAQLIRRREVSPLELVEIYLERIEQLNPQLGSYFTVTAELAIADAKAKTEL 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+PI IKD A + + L P+Y+ V ++ G +LGK Sbjct: 65 LTTTSELPPFFGVPISIKDLNAVADVTCTYGNPALLNNIPNYDDGVVTRIKQAGFTILGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E +E + + P +PW ++TPGGSSGG++AAVA LCA + G+D G Sbjct: 125 TATSELGSFPYSEPTAFPPARNPWNL-----EYTPGGSSGGAAAAVAAGLCAIAQGSDGG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VG+KP+ GR S+ + + G I RTV D+A +L I+GY Sbjct: 180 GSIRGPAACCGLVGLKPSRGRVSKAPVGERLAGIAVNGPIARTVADAAAVLDTISGYVTG 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT--IDKTWQQG----ISWLKDA 295 D + P P + A + + + +SP D QQG + L+ Sbjct: 240 DPYWLPDPEPSFLAATQTKLGALRIAFDTN-----ISPLGEADANCQQGVRQTVQLLEQL 294 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G + + S + P + A+S GL VE L + R+ Sbjct: 295 GHHVEQRSPDFSGLVEPFQIVWQAGVAAS----------GLPVEALQPLNRWLFARTGSV 344 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 Q YL+A ++ R AF VDV++ P S Sbjct: 345 AQ---------------------YLQAVSQMQVVARQIV-AFFDTVDVLVLPVYLHSPIR 382 Query: 416 LGKEENNSGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +G E S S + ++ N G PAI++P K +P+ +QLIG+P E Sbjct: 383 VG--EWASLSPEETFQNIIEWIAPCPPANATGQPAIAIPVGFDSKGLPISVQLIGKPAAE 440 Query: 471 ETLFSVGQIIE 481 TL ++ +E Sbjct: 441 ATLINLAAQLE 451 >gi|313245080|emb|CBY42518.1| unnamed protein product [Oikopleura dioica] Length = 464 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 220/489 (44%), Gaps = 55/489 (11%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 +S S +++ + ++ ++ N+++N E + RA A S R A L+G+P Sbjct: 4 KSGKFSPIDIAEQLLKDLQILNAKLNMICEYFPDQVRAQARASAARYAEAKALGPLDGVP 63 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SN 133 I +KD +G + + + T+T + G +++G NM M SN Sbjct: 64 IAMKDQLDIEGHRRRNGLEFCESGAAVEDCTITARCRAQGMIIVGVTNMHPKGMSCFGSN 123 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +G +P+ DKF G SS G+ A VA + ++GTD GGS+R PA + Sbjct: 124 ISVDHGMCRNPF-----NDKFYCGASSSGAGAIVASGIMPLAVGTDGGGSVRIPAGYCNL 178 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-----ECDATCVNL 248 VG+ P+ GR + G S + AG + T +D A L +AG D E + Sbjct: 179 VGLFPSIGRAPQRGTSS--GTCSAAGPMAHTPQDCARLYAVMAGPDYQVGSEQSRIQPKV 236 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 +P + L +S+ G+ VGI + + + ++ +Q+ ++W+ D GA+IV +P Sbjct: 237 TIP---KTLLKSLVGVKVGIDQCWNQTGVPDSLFNPFQKRLNWMIDQGAEIVHFIMPEKD 293 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI---LEMYENTRSIGFGQEVKHRIMI 365 A+ + E +S++ RY + +GK + +EM N ++ Q V+ Sbjct: 294 VVYAAHLMCFSNEIASDVIRY-------QQQGKQVDYDVEMISNIQA----QTVRA---- 338 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN---- 421 + Y A KIRT R + F + +D+I TP + ++ +G ++ Sbjct: 339 -----------TDYFIANKIRTKFMRIMDDLFSK-MDIIATPMSKSTMVEIGAGDHLYGR 386 Query: 422 -NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ ++G I FT N G P I V + +P G + + + EE LF + + Sbjct: 387 SDAKTVGKI--SYFTRIFNFVGCPGIMVQLGHDKNDVPFGFHMAAKWWNEEKLFEIAAFM 444 Query: 481 EKEAGYFRP 489 E EA Y +P Sbjct: 445 ESEAPYKKP 453 >gi|298485076|ref|ZP_07003172.1| amidase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160328|gb|EFI01353.1| amidase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 515 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 139/491 (28%), Positives = 219/491 (44%), Gaps = 48/491 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + ++++V LV +Q IE N +NA IE+ + AA+ +R Sbjct: 42 FESGVELQRRMSAGNLTSVGLVTDLLQRIEVLNKNGPALNAVIEINPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI +KD T + T A + + G ++ V Q+L D GA+++GK Sbjct: 102 SRGEKRGPLHGIPILVKDNLDTGDQMQTTAGALSMVGLPAPRDAFVVQRLRDAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W S + P GSS GS+ +A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSSRGGQTRHPYDLSADPLGSSSGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G +G++PT G SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVIGLRPTLGLLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECDATC--VNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +G D D + V +Y L ++ G +G P D + D +Q+ S L Sbjct: 276 SGNDSLDEATARASTDVVNYVDHLRTDALSGKRLGYPNHTH-DGMPMDDDPEFQKVKSRL 334 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 AGA +V + +P + +++ + L Y R GL V D + + NT Sbjct: 335 SAAGAILVPVDVPSIDST--SEFLVLLRDFKRELNAYLSTRTGLGVSTLDEIIAF-NTAF 391 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G Q ++I + +S D YL I A Q +D +L Sbjct: 392 PG-AQAYDQDLLIDSSSVSVDQED--YLS-------IATSLRAAHRQLIDGLL------- 434 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +S + +++V AV +AG P I+VP L E +P GL + + E Sbjct: 435 -------QQHSLDVLIDWSEVSFKAVGAIAGYPGITVPVGLEENGLPRGLYFLSTAWDEG 487 Query: 472 TLFSVGQIIEK 482 L S +E+ Sbjct: 488 ALLSYAYALEQ 498 >gi|256761182|ref|ZP_05501762.1| amidase [Enterococcus faecalis T3] gi|256682433|gb|EEU22128.1| amidase [Enterococcus faecalis T3] Length = 482 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 132/515 (25%), Positives = 224/515 (43%), Gaps = 78/515 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ + G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQKAEATYQKNKQQ-----DKLFAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S +K G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKKAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P+ +++ + Q + + + + +SP + +Q +L AG +I+EI Sbjct: 229 APYQAPLAEWQTHTKK--QRLKIALCTASPIGSMISPEATQAAKQAADFLAAAGHEIIEI 286 Query: 303 SLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVK 360 P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 287 PYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ--- 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +I TYV S + +D + E Q D+ L+PTT SA + ++ Sbjct: 340 -KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSAPKINEDL 386 Query: 420 -------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAISVPAALCEKKM 457 E + + D F T N+ G PAIS+P + + Sbjct: 387 QSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTATGL 446 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 PLG+QL+ RE+ LF VG+ E++ + P + Sbjct: 447 PLGIQLLAARGREDLLFQVGEQFEQKGKFKLPESY 481 >gi|307329516|ref|ZP_07608676.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306884821|gb|EFN15847.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 527 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 141/502 (28%), Positives = 234/502 (46%), Gaps = 52/502 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + E + R+ +++ L +Y++ I + ++A + R AA SD R Sbjct: 51 DLDTVTIPELQARMADGSLTSSALTSTYLRRIRAIDPTIHAVLRTDPTAPRQAAA-SDAR 109 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 +G R L+GIP+ +KD T+G+ T A S L G P ++ + +L D GAV+LGK Sbjct: 110 HRHGATRGPLDGIPVLLKDNVNTRGLPTTAGSLALAGSPPDTDAALVTRLRDAGAVILGK 169 Query: 122 LNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 N+ E+A ++ TS + V + D+ P GSS GS AA+A L +IGT+T Sbjct: 170 TNLSEWANFRAAKPTSGWSAVGGQTNNPYVLDR-NPCGSSAGSGAALAASLAQVAIGTET 228 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PA G VG KP+ G S+ G++ + D AG + R V D+A+ ++G Sbjct: 229 DGSIVCPAGMNGVVGHKPSLGLVSQAGVVPISAEQDTAGPMARNVIDTALTFSVLSG--- 285 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 T L P +++G +G+ +RL L P +D + L+ AGA++V Sbjct: 286 -GRTAEGLTNPG-------ALRGKRIGL---WRLPSLGPEVDAVMTRTAKRLRTAGAEVV 334 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR------SIG 354 E++ P+ + + +E ++ Y R G R ++ E+ E R + Sbjct: 335 EVTPPYQRRLAELEFPALLSEFHRDIDAYLATREGPR----NLAELIEFNRTHPAEQTCF 390 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFE-QGVDVILTPTTPTS 412 GQE+ + + + D Y R +++ L +R E +D I +PT P Sbjct: 391 AGQELFEQALA-----APATTDPEYRAMRAELKDLSRRSIDETMATHHLDAIASPTNP-- 443 Query: 413 AFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P + G NDV + +AG P++SVPA + ++P+GL L+ + Sbjct: 444 --PAWTTDCARGD-----NDVIPSSTPAAVAGYPSLSVPAGFVD-ELPVGLLLMAGDHED 495 Query: 471 ETLFSVGQIIEKEAGYFRPHKW 492 L S+G E+ R H W Sbjct: 496 TELLSLGAAAER-----RLHAW 512 >gi|118616486|ref|YP_904818.1| peptide amidase, GatA_1 [Mycobacterium ulcerans Agy99] gi|118568596|gb|ABL03347.1| peptide amidase, GatA_1 [Mycobacterium ulcerans Agy99] Length = 506 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 158/524 (30%), Positives = 227/524 (43%), Gaps = 59/524 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEES 59 EL ++E++ + +A L D Y I+ I+ S + + IEV A A AE Sbjct: 2 ELPEFTIAETQTAFERGEWTAAGLTDCYLRRIREIDQSGPMLRSIIEV-NSDALAIAEAL 60 Query: 60 DKRIINGDARD-LEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D G R L G+P+ IKD T + T A S L+G ++ V ++L D GAV Sbjct: 61 DAERSGGRIRGALHGVPVVIKDSIDTGDKMATTAGSLALEGNIATRDAFVVKQLRDAGAV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPV--ISPWRSMDSTDK------FTPGGSSGGSSAAVAG 169 +LGK NM E+ G+ +E Y S W S + +P GSS S+ AVA Sbjct: 121 ILGKANMSEW--GNMSEWGYMRSTRPCSGWSSRGGQVRNPYVLDRSPLGSSSSSAVAVAA 178 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 LC A++G + GSI +PAS VG+KPT G SR G+I A D G + RTV D A Sbjct: 179 NLCVAALGAEVDGSIVRPASSNSIVGLKPTVGLLSRSGVIGVASPQDMVGPMARTVTDVA 238 Query: 230 ILLKAIAGYDECDATCV---NLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTW 285 LL + G D+ D T DY R LD ++QG +G+ +E R T D Sbjct: 239 TLLTVMTGVDDSDPTTRAGGAHTATDYRRFLDPAALQGARLGVARE-RFGAHEAT-DALI 296 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE 345 + + L GA+IV+ P +LP + + + RYGL+ L Sbjct: 297 EGALGQLAALGAEIVD---PIQASSLPFFGDL----------ELELFRYGLKASLNGYLG 343 Query: 346 MYENT------RSIGFGQEVKHRIM--IGTYVLSSR-----CYDSHYLRAR-KIRTLIKR 391 + I F + ++M G L DS YLR R ++R L Sbjct: 344 AHPRAAVGSLDEPIAFNRAHAGQVMPYFGQEFLEQSQAKGDLTDSQYLRVRAELRRLAGA 403 Query: 392 DFTEAF--EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 D + E +D I+ PT + AF + + +I + +AG P I VP Sbjct: 404 DGIDKALREHRLDAIVAPTEGSPAFAIDPVVGD-----NILPGGCSTPPAVAGYPHICVP 458 Query: 450 AA-LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 A C +P+GL L F+E L E+ G RP ++ Sbjct: 459 AGYFC--GLPVGLSLFAGAFQEPKLIGYAYAFEQATGVRRPPRF 500 >gi|172038989|ref|YP_001805490.1| amidase [Cyanothece sp. ATCC 51142] gi|171700443|gb|ACB53424.1| amidase [Cyanothece sp. ATCC 51142] Length = 486 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 137/497 (27%), Positives = 225/497 (45%), Gaps = 63/497 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + + + IS +EL Y++ IE N Q+ ++ + A+ A A+E ++ Sbjct: 22 DLAFTPALDLAQLISDRTISPLELTQLYLERIERYNPQLGSFFFIAAETAIQEAKEKTEQ 81 Query: 63 IINGDARD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +I+ + G+P IKD A + L Y+ VT ++ + G ++ Sbjct: 82 LIHSSNSNGLPPFFGVPTAIKDLNAVAKMPISYGVAALKENIASYDDGVTLRMKEAGFII 141 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK + E + P +PW +D +TPGGSSGGS+AAVA LCA + G+ Sbjct: 142 LGKTATSQLGSFPFTEPPGFPPARNPWH-LD----YTPGGSSGGSAAAVAAGLCAIAQGS 196 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PA+ G VGIKP GR S + + + G + RTV D+A LL ++GY Sbjct: 197 DGGGSVRGPAACCGLVGIKPARGRVSHAPVGDYQSGISTNGPLARTVADAAALLDVMSGY 256 Query: 239 DECDATCVNLPVPD--YERALDQSIQGMTVGIPKEYRLDYLSP------TIDKTWQQGIS 290 D LP PD + A Q + + D++ P + +T Q+ + Sbjct: 257 ITGDPYW--LPSPDISFSEATKQMSPPLKIAF-----CDHIPPFTHSETIVKETIQKTVH 309 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ G + E+ P + + + +I + S++ GL L + Sbjct: 310 LLESFGHSL-EMKCPSVETLIEPFTLIWQSAISAS---------GLPSTVLSPLNGWFKE 359 Query: 351 RSIGFGQEVK--HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 + I G+ ++ H++ IG+ R L+ AF DV+L P Sbjct: 360 QEITAGEYLRAVHQLQIGS------------------RHLV------AFFDNYDVLLLPV 395 Query: 409 TPTSAFPLG--KEENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +G K+ + ++ I N + A N +GLPAI++P A EK +P+G+QL+G Sbjct: 396 YLHQPIKVGQWKDLSPQETLEKIINWIAPCPAFNASGLPAITLPMAQDEKGLPIGIQLVG 455 Query: 466 QPFREETLFSVGQIIEK 482 +P E TL + +EK Sbjct: 456 KPADELTLIRLAAQLEK 472 >gi|331696778|ref|YP_004333017.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326951467|gb|AEA25164.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 490 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 143/516 (27%), Positives = 224/516 (43%), Gaps = 79/516 (15%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F+ E D +R+ +SAVELV +++ I+ N +NA + +V ++A A A +D+ Sbjct: 5 ELCFLTAREMADLVRTGQVSAVELVRAHLDRIDAVNPAVNAIVTLVPEQALADAARADEA 64 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G L GIP+ KD T GI T S I P + V ++ GA+ +GK Sbjct: 65 RSAGRPLGPLHGIPVAHKDTHRTAGIRTTYGSRIFADHVPDDDELVVTRIRAAGAITIGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA GS +G +P+ + D+ G S G ++A G A G D G Sbjct: 125 TNVPEFAAGSHTYNEVFGLTRNPY----ALDRSAGGSSGGAAAALACGMQPLAD-GNDMG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-E 240 GS+R PASF VG++PT GR + + SL G + R+V D A+LL IAG D Sbjct: 180 GSLRNPASFCNVVGLRPTAGRVPQYPSVLPWSSLTVPGPMARSVDDLALLLSVIAGPDPR 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 C + + P R LD ++ G+ ++W D G + Sbjct: 240 CPISLADDP-----RTLDGPLEVDLHGV-------------------RVAWAPDLGGAVA 275 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL---------RVEGKDILEMYENTR 351 + PA A LAR GV GL + G D E++ R Sbjct: 276 ----------------LDPAVADV-LARQVGVLEGLGCVVVEDHPDLSGAD--EVFRTLR 316 Query: 352 S----IGFGQEVK-HRIMIGTYVLSSRCYDSHYLRARKIRTL--IKRDFTE---AFEQGV 401 + + +G+ + HR ++ L++ LRA + ++ + E AF G Sbjct: 317 AWQFQLAYGELLDAHRDLVKPS-LAANIEAGRELRAEDVARAEGMRGELWERMHAFFAGY 375 Query: 402 DVILTPTTPTSAFP-------LGKEENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAAL 452 DV++ +P F L + + G Y D +A ++ G PA+SVPA Sbjct: 376 DVLVAAVSPVPPFDARLEYPCLPAAGDGGAAGGAGYLDWMRLAYWISATGCPALSVPAGF 435 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +P+G+Q++G P + + +G + E G+ R Sbjct: 436 SGDGLPVGMQIVGPPGADRRVLEIGHMFETSTGHGR 471 >gi|226303643|ref|YP_002763601.1| amidase [Rhodococcus erythropolis PR4] gi|226182758|dbj|BAH30862.1| putative amidase [Rhodococcus erythropolis PR4] Length = 483 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 126/492 (25%), Positives = 229/492 (46%), Gaps = 46/492 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L++++ +E+ R++++S VEL+ + + + +NA+ E + ++A A E++ R Sbjct: 4 DLHYLSATEAIAHFRTRELSPVELLQAVVDRTQKFEPHINAFTEEMFEEALIGAREAESR 63 Query: 63 IING--DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + D R LEGIP+ K+ A G S G + V ++ G ++ Sbjct: 64 YLGHGPDPRPLEGIPVAAKEKHAIAGKSLTEGSLAARGNIARENAPVIDRVLAAGGLIHA 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + EF + + + +G +PW ++D ++PGGSSGG+ AA+A + +D Sbjct: 124 RTTTPEFCVAAFTHSPLWGVTRNPW-NLD----YSPGGSSGGAGAALAAGTTTLATASDI 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PA FTGTVG+K +YGR + +S S G + RTV D+ +L + G D Sbjct: 179 GGSTRGPAGFTGTVGLKASYGRIPGVAPLSMD-SYRGDGPMARTVDDAILLANVLIGPDP 237 Query: 241 CDAT----CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + + LP +Y +++GM + + + P I+ + L DAG Sbjct: 238 RDHSSLRPAITLPH-EY-----PTVEGMRIALCLRLGDFPIEPDIEANTRALAQSLVDAG 291 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A + EI LP T+ ++A V +G + G + E+ G Sbjct: 292 AIVEEIELPWTR---------------DSMAAAVKVHFG-TIMGASVAEVARV-----HG 330 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + + + S + +L + T ++R+ EA D ++ PT+ T AFP Sbjct: 331 DLLADYTLDNVAITSKGAAEMSFLDGLRKETQMQRELAEAMAP-FDALICPTSGTIAFPA 389 Query: 417 GKEENNSGSMG--HIYND---VFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIGQPFRE 470 G+ + ++ H+ + T+ N+A P ++VP+ +P G+Q++G + E Sbjct: 390 GESLLDGLTVAGQHVNTTAEALLTLPFNVANRCPVLAVPSGHAHNGVPTGVQIVGHTYDE 449 Query: 471 ETLFSVGQIIEK 482 T+F +G+ +EK Sbjct: 450 PTVFRIGKALEK 461 >gi|289623542|ref|ZP_06456496.1| amidase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648298|ref|ZP_06479641.1| amidase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330865726|gb|EGH00435.1| amidase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 515 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 139/491 (28%), Positives = 219/491 (44%), Gaps = 48/491 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + ++++V LV +Q IE N +NA IE+ + AA+ +R Sbjct: 42 FESGVELQRRMSAGNLTSVGLVTDLLQRIEVLNKNGPALNAVIEINPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI +KD T + T A + + G ++ V Q+L D GA+++GK Sbjct: 102 SRGEKRGPLHGIPILVKDNLDTGDQMQTTAGALSMVGLPAPRDAFVVQRLRDAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W S + P GSS GS+ +A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSSRGGQTRHPYDLSADPLGSSSGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G +G++PT G SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVIGLRPTLGLLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECDATC--VNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +G D D + V +Y L ++ G +G P D + D +Q+ S L Sbjct: 276 SGNDPLDEATARASTDVVNYVDHLRTDALSGKRLGYPNHTH-DGMPMDDDPEFQKVKSRL 334 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 AGA +V + +P + +++ + L Y R GL V D + + NT Sbjct: 335 SAAGAILVPVDVPSIDST--SEFLVLLRDFKRELNAYLSTRTGLGVSTLDEIIAF-NTAF 391 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G Q ++I + +S D YL I A Q +D +L Sbjct: 392 PG-AQAYDQDLLIDSSSVSVDQED--YLS-------IATSLRAAHRQLIDGLL------- 434 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +S + +++V AV +AG P I+VP L E +P GL + + E Sbjct: 435 -------QQHSLDVLIDWSEVSFKAVGAIAGYPGITVPVGLEENGLPRGLYFLSTAWDEG 487 Query: 472 TLFSVGQIIEK 482 L S +E+ Sbjct: 488 ALLSYAYALEQ 498 >gi|229492799|ref|ZP_04386597.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus erythropolis SK121] gi|229320239|gb|EEN86062.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus erythropolis SK121] Length = 483 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 129/492 (26%), Positives = 229/492 (46%), Gaps = 46/492 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL++++ +E+ R++++S VEL+ + I + +NA+ E + +A A A +++ R Sbjct: 4 ELHYLSATEAIAHFRARELSPVELLQAIIDRTQKFEPHINAFTEEMFDEALAGARDAESR 63 Query: 63 I--INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 D R LEGIP+ K+ A G S G + V ++ G ++ Sbjct: 64 YRGQGPDPRPLEGIPVAAKEKHAIAGKSLTEGSLAGRGNIARENAPVIDRVLAAGGLIHA 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + EF + + + +G +PW ++D ++PGGSSGG+ AA+A + +D Sbjct: 124 RTTTPEFCVAAFTHSPLWGVTRNPW-NLD----YSPGGSSGGAGAALAAGTTTLATASDI 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PA FTGTVG+K +YGR + + +S S G + RTV D+ +L + G D Sbjct: 179 GGSTRGPAGFTGTVGLKASYGRIAGVAPLSMD-SYRGDGPMARTVDDAILLANVLIGPDP 237 Query: 241 CDAT----CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D + + LP +Y S++GM + + + P I+ + L DAG Sbjct: 238 RDHSSLRPAITLPH-EY-----PSVEGMRIALCLRLGDFPIEPDIEANTRALAQSLVDAG 291 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A + EI LP T+ ++A V +G + G + E+ G Sbjct: 292 AIVEEIELPWTR---------------DSMAAAVKVHFGT-IMGASVAEVARV-----HG 330 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + + + S + +L + T ++R+ EA D ++ PT+ T AFP Sbjct: 331 DLLADYTLDNVAITSKGAAEMSFLDGLRKETQMQRELAEAMAP-FDALICPTSGTIAFPA 389 Query: 417 GKEENNSGSMG--HIYND---VFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIGQPFRE 470 G+ + ++ H+ + T+ N+A P ++VP+ +P G+Q++G + E Sbjct: 390 GESLLDGLTVAGQHVNTTAEALLTLPFNVANRCPVLAVPSGHAHNGVPTGVQIVGHTYDE 449 Query: 471 ETLFSVGQIIEK 482 T+F +G+ +EK Sbjct: 450 PTVFRIGKALEK 461 >gi|295114328|emb|CBL32965.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Enterococcus sp. 7L76] gi|315145880|gb|EFT89896.1| amidase [Enterococcus faecalis TX2141] Length = 482 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 135/525 (25%), Positives = 222/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQKAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIESFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|254432088|ref|ZP_05045791.1| peptide amidase, GatA_1 [Cyanobium sp. PCC 7001] gi|197626541|gb|EDY39100.1| peptide amidase, GatA_1 [Cyanobium sp. PCC 7001] Length = 514 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 141/515 (27%), Positives = 226/515 (43%), Gaps = 57/515 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESD-KRI 63 +++E + ++ A L ++ +Q +++ + + + IE+ A A AE D +R Sbjct: 13 SIAELEQAMARQECCATSLCEAALQRIASLDGAGPTLRSVIEI-NPDAPAIAEALDLERR 71 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G L GIP+ +KD F T + T A S L G ++ V ++L GAV+LGK Sbjct: 72 QSGPRSALHGIPVLVKDSFDTGDRMMTTAGSLALVGNIASRDAFVVERLRQAGAVLLGKT 131 Query: 123 NMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NM E+ M S+ S + R+ D+ +P GSS GS+ AVA LC A+IG + Sbjct: 132 NMSEWGYMRSTRACSGWSSRGGQVRNPYVLDR-SPLGSSSGSAVAVAAGLCVAAIGAEVD 190 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI +PAS VG+KPT G SR G+I A D AG + R+V D A LL + G+D Sbjct: 191 GSIVRPASSNSIVGLKPTVGLISRSGVIGVADPQDTAGPMARSVADVAALLNVLTGHDPD 250 Query: 242 D---ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D A V PDY L+ ++QG +G+ +E + D +Q I+ L+ GA Sbjct: 251 DPITAEGVRRAAPDYRAFLNPAALQGARLGVARECFGQHEG--TDGLIEQAIAQLRQLGA 308 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 IV+ P ALP + + + RYGL K L+ Y ++ + + Sbjct: 309 VIVD---PVRASALPFFGGLE----------LELFRYGL----KHSLDRYLHSHPLAPVR 351 Query: 358 EVKHRIMIGTYVLSSRC--YDSHYLRARKIRTLIKRDFTEAF------------------ 397 ++ I ++ + +L + R ++ + Sbjct: 352 SLEELIRFNRDHAAAVMPYFQQEFLEQAQTRGDLEEPACQQVMAELRRLSRSGGIDRALR 411 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 E +D I+ PT + F + + HI + +AG P ISVPA + Sbjct: 412 EHQLDAIIAPTEGSPPFVIDPLVGD-----HILPGGCSTPPAVAGYPHISVPAGFVH-GL 465 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 P+GL ++E L E+ + RP + Sbjct: 466 PVGLSFFAGAWQEGKLLGYAHAFEQATRHRRPPSF 500 >gi|160896891|ref|YP_001562473.1| amidase [Delftia acidovorans SPH-1] gi|160362475|gb|ABX34088.1| Amidase [Delftia acidovorans SPH-1] Length = 456 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 132/476 (27%), Positives = 207/476 (43%), Gaps = 50/476 (10%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 RL + ++V+L + + A S + V A A A SD G AR +EG Sbjct: 16 RLHGGETTSVQLTEQAL-ARTMSGEGPKVFTRVFQGAALAEARASDVLRAAGLARSPIEG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ +KD F G T S +L P + V Q+L GAV++G NM EFA Sbjct: 75 LPVSVKDLFDIAGFPTLGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNMTEFAYSGL 134 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +PW+ D PGGSS G++ +V + A+IG+DTGGS+R P++ G Sbjct: 135 GINPHYGTPRNPWQR-DEGGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVRIPSALCG 193 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KPT R S G++ + +LD G + +VR A L DA P+ + Sbjct: 194 LTGFKPTARRVSMEGVLPLSANLDSIGPLAPSVRCCATL----------DAILSGEPLGE 243 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 A +QG+ + P LD + T+ W++ +S L AGA I + Sbjct: 244 LHAA---PLQGLRLLAPTNVVLDGMDATVAAAWERALSLLSQAGAHITHV---------- 290 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 +++P +++ G E + TR + V RI+ G + ++ Sbjct: 291 ---VVAPFGELADINSKGGFTA---AEAWAWHRHHIATRLSEYDPRVGTRILRGKDISAA 344 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG----KEENNSGSMGH 428 D L AR+ R I + + D+I+ PT P A + +E G+ G Sbjct: 345 DYID---LLARR-RQWIAAVSAQMADH--DLIVMPTVPVVAPKIADLTQSDEAYFGANGL 398 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIEK 482 I + +N AIS+P C + + P+GL L G ++ L SV +E+ Sbjct: 399 ILRN--PTLINFLDGCAISLP---CHRAGEAPVGLSLAGLGGQDRRLLSVALAVEQ 449 >gi|33594308|ref|NP_881952.1| putative amidase [Bordetella pertussis Tohama I] gi|33564383|emb|CAE43689.1| putative amidase [Bordetella pertussis Tohama I] gi|332383719|gb|AEE68566.1| putative amidase [Bordetella pertussis CS] Length = 472 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 137/487 (28%), Positives = 225/487 (46%), Gaps = 37/487 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL F +++E L + SAVEL Y+ I +N ++AY+ V A A+ +D Sbjct: 1 MSELAFSSLAELARGLEAGRYSAVELARHYLARIARANEALHAYVSVDEAGALRLAQAAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G A L+G+PI IKD +G T A S R T ++L G V+L Sbjct: 61 ARRAAGYALGPLDGLPIAIKDLCEIEGQVTTAGSAAWRERRSKVTGTAVRRLLAAGMVVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M EFA G G +PW D + PGGSS GS AVA L A++G+D Sbjct: 121 GKTHMVEFAFGGWGTNPVMGTPRNPW---DLSHPRIPGGSSSGSGVAVAAGLAPAALGSD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA+ G G+K + G S G + + +LD G +TR D+ +L++A+AG D Sbjct: 178 TGGSVRIPAALNGITGLKTSAGLISLHGAVPLSQTLDSIGPMTRDAYDAMLLVQALAGPD 237 Query: 240 ECDATCVNLPVPDYE--RALDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDA 295 D + +P Y R + + G + + E Y L +S + +Q L+ Sbjct: 238 AADPATLGVPALVYAPPREGGRPLAGRRIAVMAEENYPL-AVSADVALAVRQAADTLRAL 296 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA++ ++ P + A+ + + E + Y + ++ Sbjct: 297 GAEVATVATP--------FDFTRLMHANGRI---------IAAEAYVLHRGYIDDAALPL 339 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+ V+ R+ G + + + Y+ A + + + A+ Q D +LTP+ P +A Sbjct: 340 GEFVRARVQSGRAIGA-----ADYIAAMREHAQARAQW-RAWMQDYDALLTPSLPFAACR 393 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 L + + + F+ A N G +++PA +P+G+QL+G+PF + L Sbjct: 394 LDEVDEQGAPLA-----AFSRAGNFLGASGLALPAGFSADGLPVGVQLMGKPFDDGLLCG 448 Query: 476 VGQIIEK 482 +G ++ Sbjct: 449 LGVAFQQ 455 >gi|315148934|gb|EFT92950.1| amidase [Enterococcus faecalis TX4244] Length = 482 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 135/525 (25%), Positives = 222/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQKAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|15599538|ref|NP_253032.1| amidase [Pseudomonas aeruginosa PAO1] gi|9950568|gb|AAG07730.1|AE004850_8 probable amidase [Pseudomonas aeruginosa PAO1] Length = 494 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 128/462 (27%), Positives = 213/462 (46%), Gaps = 42/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + A+ + A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLTQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT GI T S + G P +++ V +++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y P+ R+ + GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 ----YNPLFGTTRNAYDPARIA-GGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNV 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ GR F L G + R+V D A LL AGYD C + + P Sbjct: 201 YGFRPSQGRVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRDDPR- 259 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYA 310 + L + +G +G +Y YL ++G+ L +A E+ + Sbjct: 260 RFADDLGRDFRGARLGWLGDY-AGYLP------MEEGVLELCEAALGDFAELGC-DVEAC 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV 369 LP Y + L R V V+G + E+Y + R + E + + G + Sbjct: 312 LPDYPL-------ERLWRTWLVHRQWLVQGS-LGELYADPARRVRLKPEAQWEVESGLGL 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGS 425 ++ Y RA R+ R FE+ D +L P+ FP E +G Sbjct: 364 GAAEVY-----RASLDRSDWYRALARLFER-YDFLLLPS--AQVFPFDAETAWPRQVAGR 415 Query: 426 MGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 Y+ V + +AGLPAISVP +P+GLQ+IG Sbjct: 416 PMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLPMGLQIIG 457 >gi|257088103|ref|ZP_05582464.1| amidase [Enterococcus faecalis D6] gi|256996133|gb|EEU83435.1| amidase [Enterococcus faecalis D6] gi|315026859|gb|EFT38791.1| amidase [Enterococcus faecalis TX2137] Length = 482 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 135/525 (25%), Positives = 222/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQKAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|28869760|ref|NP_792379.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853005|gb|AAO56074.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331014524|gb|EGH94580.1| amidase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 507 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 137/489 (28%), Positives = 227/489 (46%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K IS VEL+D+ I+ IE+ N ++NA+ ++A A ++ Sbjct: 5 SELLGKSATELRALIGNKQISPVELLDACIERIESLNPKINAFAATCFERAHDEALLAEH 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+M+G Sbjct: 65 AVLQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIMVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGVVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLA 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + ++ R +D S + VG +++ + I +++ IS LK Sbjct: 239 QSDPLSYAIADDEFAPRTVDLS--QLRVGYSEDFGTCAVDTHIRAVFREKISALKPLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L T A + ++ R + GL+ +D + NTR+ Sbjct: 297 CDAIDLNLTS-----------AHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA----- 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +G + C +H ++R + R F + FE D+IL PTTP S FP Sbjct: 341 ----NFEMGAAMSLQDCVKAHGEQSR-----LFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + V + PA+S+P + MP GLQ+IG + L Sbjct: 391 ELYLREVNGVQLDNYYRWLALCYTVTLTTNPALSLPCGTDHQGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + +E+ Sbjct: 451 LACAEALEQ 459 >gi|113867862|ref|YP_726351.1| Asp-tRNA Asn / Glu-tRNA Gln amidotransferase A subunit or related amidase [Ralstonia eutropha H16] gi|113526638|emb|CAJ92983.1| Asp-tRNA Asn / Glu-tRNA Gln amidotransferase A subunit or related amidase [Ralstonia eutropha H16] Length = 475 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 135/502 (26%), Positives = 221/502 (44%), Gaps = 61/502 (12%) Query: 1 MSE-LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 MSE L + +E + R+R K+IS VEL + + E +N +I + A +A AAA + Sbjct: 1 MSEALCLASAAELQQRIRRKEISPVELTAAVLARAERLQPVLNCFITLCADEAMAAARAA 60 Query: 60 DKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + +++G L GIP KD T+G+ T + + P ++ +L GA++ Sbjct: 61 EAEVMSGRPLPPLHGIPFTAKDIVNTRGVRTTFGAVPMRDNVPAEDAVAVARLRAQGAIL 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK EF S ++ +G + W + + T GGSSGG++ AVA + ++ T Sbjct: 121 VGKTTTPEFGSKSLTDSPLFGRTRNAWHA-----ERTSGGSSGGAAVAVASGMAPLAVAT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG------IITRTVRDSAILL 232 D GGS R PA+ G VGIK + G+I + + D G TRTV D+ ++L Sbjct: 176 DGGGSTRIPAACNGVVGIKQSQ------GVIPHSQAQDLFGNQTYVTPTTRTVADTGLML 229 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL----DYLSPTIDKTWQQG 288 +A+AG CD + +P DY A QG G Y L +S + + ++ Sbjct: 230 QAMAGEHPCDPWSIGVPAADYVAAAQP--QGDLRGRCILYCLAPPGRPVSADVARAFEAS 287 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + L+ GA++ + + P + N + R I+ + Sbjct: 288 LDKLRALGAELEPFG--------GEGFDVEPVWRAINHTVW-------RTRFAPIVAQHR 332 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 S F ++V+ ++ L R ++ L+ R D++ PT Sbjct: 333 EALSPTFVRQVESAAAFTAVEYQQAMFERSQLFLR-VQALLGR---------ADLLAMPT 382 Query: 409 TPTSAFPLGKEENNSGSM---GHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPL 459 +A PL E++ G + G Y DV +T+ NM G PAIS+P +P+ Sbjct: 383 ITRTALPL--EQDLFGQIEIDGQDYPDVRANWFPWTMPFNMTGHPAISLPCGFGGDGLPI 440 Query: 460 GLQLIGQPFREETLFSVGQIIE 481 GLQL+GQ + L V + E Sbjct: 441 GLQLVGQFRGDAQLLRVAALYE 462 >gi|119717582|ref|YP_924547.1| amidase [Nocardioides sp. JS614] gi|119538243|gb|ABL82860.1| Amidase [Nocardioides sp. JS614] Length = 470 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 138/506 (27%), Positives = 217/506 (42%), Gaps = 50/506 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEES 59 M+EL+ + E D +R ++S +EL D Y++ + ++ + A++ + +AR A+ + Sbjct: 1 MAELHDLTGLEQGDLVRRGEVSPLELTDHYLERADRLDT-VGAFVTLTPDRARDRASALT 59 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 ++ ++G L G+P IKD T G+ T S F P VT + G V Sbjct: 60 EEAFLSGPGESPLFGVPTAIKDLNLTAGVRTTFGSAAFADFVPDVSDGVTISIEAAGMVS 119 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N EF E P ++PW D T T GGSSGG++AAVA L + G+ Sbjct: 120 LGKTNTPEFGSPCYTEPDVAPPAVTPW---DRTR--TAGGSSGGAAAAVAAGLVPVAQGS 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR PAS G VG+KP+ GR S + L AG I RTVRD+A LL +AG Sbjct: 175 DGGGSIRIPASCCGLVGLKPSRGRISGYPMYGDPVGLATAGPIARTVRDAAALLDVLAGR 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVG-----IPKEYRLDYLSPTIDKTWQQGISWLK 293 D + P + + D+ + + + E +D P + W+ L+ Sbjct: 235 RAGDPSWAPAPTESFLASCDRDPGRLRIARFIEPVIAEVAVD---PDCVQAWEDASRLLE 291 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRS 352 G ++V++ P A+P + + V L V + + TR Sbjct: 292 SLGHEVVDVPAPLPPEAVPVFEVCW------------AVLTALSVVPPEREHLLRPLTRW 339 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + G + + R + + L A D +LTPT Sbjct: 340 LAAAGREVNGPEFGLAIGAMRRHAADALTALA---------------PYDAVLTPTLAAP 384 Query: 413 AFPLGKEENNSGSMGHIYND----VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P+G ++ +T A N+ G+PAIS+P +P+G+ L +P Sbjct: 385 PVPVGAMRDDGDPAADFSAQKEFTPWTSAWNVTGMPAISLPLHWTAGGLPVGVMLAARPA 444 Query: 469 REETLFSVGQIIEKEAGYF--RPHKW 492 EE L ++ +E A + RP W Sbjct: 445 EEELLLALSAQVEAAAPWSDRRPPGW 470 >gi|313496988|gb|ADR58354.1| Putative amidase [Pseudomonas putida BIRD-1] Length = 469 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 209/470 (44%), Gaps = 35/470 (7%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIP 75 + + +S VE+VD + I+ N +NAY V + ARAAA S++R G L+G+P Sbjct: 20 QRRQLSPVEVVDDVLARIDLHNPAVNAYCHVDGEGARAAARASEQRWQRGQPCGRLDGVP 79 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD T+G+ T+ S G P ++ + + + GAV++GK EF + Sbjct: 80 ASIKDLTLTRGMPTRKGSRTTSGAGPWEVDAPFSAFMREAGAVLVGKTTTPEFGWKGVTD 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG +PW + + T GGSSGG++AA A L G+D GGSIR P +FTGT Sbjct: 140 NPLYGITRNPWDT-----RLTAGGSSGGAAAAAALNLGVLHQGSDAGGSIRIPCAFTGTF 194 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPT+G + + L G +TRTV DS ++L +A D D P Sbjct: 195 GIKPTFGYVPQWPASAMT-VLSHLGPMTRTVDDSVLMLDCVARPDARDG-LAGAPRQAPW 252 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + Q + G+ + + ++P I Q + L GA++ E+ P + Sbjct: 253 LSQQQDLSGLRIAYSANFGYVQVAPQIQALVAQAVQRLARLGAQVEEVD--------PGF 304 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P E + L R + + + R I E +I +G Y Sbjct: 305 S--DPLETFNTLWFAGAARLASALSDEQRALLDPGLRWIA---EQGAQISLGEY------ 353 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDV 433 + L AR LI + AF Q DV+++P P AF G SG + Sbjct: 354 --TQALEARA--ELIAK--MNAFHQRYDVLISPMLPLVAFEAGHNVPPGSGMAQWMEWTP 407 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 F+ N+ PA SVP + +P+GLQ++ F +E + V ++ E+ Sbjct: 408 FSYPFNLTQQPAASVPCGFTREGLPVGLQVVAGRFADEQVLRVCKVYEQH 457 >gi|213969838|ref|ZP_03397972.1| amidase family protein [Pseudomonas syringae pv. tomato T1] gi|301384998|ref|ZP_07233416.1| amidase family protein [Pseudomonas syringae pv. tomato Max13] gi|302133295|ref|ZP_07259285.1| amidase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925386|gb|EEB58947.1| amidase family protein [Pseudomonas syringae pv. tomato T1] Length = 467 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 138/485 (28%), Positives = 210/485 (43%), Gaps = 38/485 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + I+ N +NA+ +V A+ A A + G Sbjct: 4 VIEAGALVRRGCMTPIRLTELCLSVIKTHNPTLNAFGDVYAEAALEQAWTMTAELQRGKP 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDAVPAQDAPIIRRLKGAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW D T T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNPW---DPT--LTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D Sbjct: 179 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLSGPDPLDHQA-- 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LP PD E L + Q + K R+ + D I+ +A + SLP T Sbjct: 236 LPAPD-ESFLARCDQPL-----KPLRIGFCPTLFDTPVDPQIAAAVEAAVANIARSLPVT 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L + A + G+ YG LE + GF + ++ G Sbjct: 290 VSTLTLDWQDPLATFETLWVAGRGIAYG------KALEQQLDQLDPGFAELIRRSANYGL 343 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEEN 421 YL+A + R FE D+++ PT P F P G Sbjct: 344 ---------DDYLQAMQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAGQ 393 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +S ++ FT N++G PA ++P + +P+GLQ++G F + + +E Sbjct: 394 DS-ALPWARWTPFTYPFNISGNPAANLPCGWSTEGLPIGLQVVGPRFADAHVLQFCAAVE 452 Query: 482 KEAGY 486 A + Sbjct: 453 AIAPW 457 >gi|254238993|ref|ZP_04932316.1| hypothetical protein PACG_05165 [Pseudomonas aeruginosa C3719] gi|126170924|gb|EAZ56435.1| hypothetical protein PACG_05165 [Pseudomonas aeruginosa C3719] Length = 494 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 128/462 (27%), Positives = 214/462 (46%), Gaps = 42/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + A+ + A A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLAQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT GI T S + G P +++ V +++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y P+ R+ + GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 ----YNPLFGTTRNAYDPARIA-GGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNV 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ G+ F L G + R+V D A LL AGYD C + + P Sbjct: 201 YGFRPSQGQVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRDDPR- 259 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYA 310 + L + +G +G +Y YL ++G+ L +A E+ + Sbjct: 260 RFADDLGRDFRGARLGWLGDY-AGYLP------MEEGVLELCEAALGDFAELGC-DVEAC 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV 369 LP Y + L R V V+G + E+Y + R + E + + G + Sbjct: 312 LPDYPL-------ERLWRTWLVHRQWLVQGS-LGELYADPARRVRLKPEAQWEVESGLGL 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGS 425 ++ Y RA R+ R FE+ D +L P+ FP E +G Sbjct: 364 GATEVY-----RASLDRSDWYRALARLFER-YDFLLLPS--AQVFPFDAETAWPRQVAGR 415 Query: 426 MGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 Y+ V + +AGLPAISVP +P+GLQ+IG Sbjct: 416 PMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLPMGLQIIG 457 >gi|302188138|ref|ZP_07264811.1| amidase [Pseudomonas syringae pv. syringae 642] Length = 507 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 136/489 (27%), Positives = 226/489 (46%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K +S VEL+D+ I+ IE N ++NA+ ++AR A ++ Sbjct: 5 SELLGKSATELRALIGNKQLSPVELLDACIERIERLNPKINAFAATCFERARDEALLAEH 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+++G Sbjct: 65 AVMQGQPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNTPAQDNLFVARLRAAGAIVVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLG 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + ++ R +D S + VG +++ + I +++ I+ LK Sbjct: 239 QSDPLSYVIAADEFAPRPIDLS--QLRVGYSEDFGACAVDDRIRAVFREKINTLKSLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L T A + ++ R + GL+ +D + NTR+ Sbjct: 297 CEAIDLKLTS-----------AHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA----- 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +G + C +H ++R I R F + FE D+IL PTTP S FP Sbjct: 341 ----NFDMGAAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + + + PA+S+P MP GLQ+IG + L Sbjct: 391 ELYLREVNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + IE+ Sbjct: 451 LACAEAIEQ 459 >gi|91789670|ref|YP_550622.1| amidase [Polaromonas sp. JS666] gi|91698895|gb|ABE45724.1| Amidase [Polaromonas sp. JS666] Length = 509 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 137/495 (27%), Positives = 221/495 (44%), Gaps = 57/495 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ E R + +K IS VEL+++ I IE N +NA ++AR+ A +++ + Sbjct: 7 LVVLSAVELRRLIEAKQISPVELLEACIARIEAVNPFVNAVTATCFERARSEARAAERAV 66 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + G L G+P+G+KD AT+G+ T S + P ++ + +L GA+++GK Sbjct: 67 LEGRPLGLLHGLPMGVKDLEATEGLLTTLGSPLYRDHVPAADNVLVARLRAAGAIVVGKT 126 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E G++ + +G +P+ + GGSSGGS+AA+A + G+DTGG Sbjct: 127 NVPELGAGANTRNAVWGATGNPF-----DPRLNAGGSSGGSAAALACDMLPVCTGSDTGG 181 Query: 183 SIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 S+R PA+ G VG +P+ G S ++ + P + G + RTV D+ + L A A Sbjct: 182 SLRIPAALCGVVGFRPSPGLVPSSRKLLGWTP-ISVVGPMGRTVADACLQLAASA----- 235 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD---YLSPTIDKTWQQGISWLKDAGAK 298 G VG P Y +D +L P + W +D GA Sbjct: 236 ---------------------GAAVGDPLSYPVDPAGFLEPPAVDLGALRVGWTEDFGAC 274 Query: 299 IVEISLP---HTQYALPAYYIISPAEASSNLAR----YDGVRYGLRVEGKDILEMYENTR 351 V+ S+ + A + S E L +D +R V G + YE Sbjct: 275 DVDASIRGAFRRKIASMKHLFRSCDEVKFELGDVHRCFDVLRAEAFVAGTR--DAYERDP 332 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + G + IG + D + +A + R L + A G D+IL PTTP Sbjct: 333 A-SLGPNTRANFEIGA---AMSLLDCAWAQAEQTRILAR---FHAAMAGCDLILAPTTPV 385 Query: 412 SAFP---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 S FP L + + + + Y + T V + LPA+S+P MP GLQLIG+ Sbjct: 386 SPFPWTTLYADTVDGQAQSNYYRWLALTYVVTLTTLPALSLPCGFDHAGMPFGLQLIGRF 445 Query: 468 FREETLFSVGQIIEK 482 + + V +E+ Sbjct: 446 RADHHVLGVAAALEQ 460 >gi|301631960|ref|XP_002945059.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Xenopus (Silurana) tropicalis] Length = 474 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 130/490 (26%), Positives = 221/490 (45%), Gaps = 39/490 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ SE+ +++ IS VEL+ + + ++NA+ + A AA +++ Sbjct: 5 DLCYLTASEAIALFKARRISPVELLQAQQRRASRLEVEINAFCSRRDEAALVAARKAELT 64 Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + R L+GIP +KD G H S +L + +TQ+L D GAV+ Sbjct: 65 YLRTPERAGLLDGIPTALKDEHNLVGEHITQGSWLLGEQVDTVNAPLTQRLLDAGAVIHA 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N+ E + + YG +PW K+T GGSSGGS AA+A L + G+D Sbjct: 125 RTNVPECCVAIFTRSLRYGVTRNPWNP-----KYTCGGSSGGSGAALAAGLTTLASGSDI 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA++ G VG+KP+YGR + + G++ R+V D A++ I G Sbjct: 180 GGSIRVPAAYCGVVGLKPSYGRVPESSMFFAMNHHNHNGVLARSVADCALMFNVINGPHR 239 Query: 241 CDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + V P E L QS ++GM + + + +SP + K + L+ GA++ Sbjct: 240 ADPSGVK---PRLELPLQQSPVRGMRIALSMDLGFFKISPDVRKNTLRAAEILRQQGAQV 296 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EI+LP T A+ D + + L G+ + ++ E G ++V Sbjct: 297 HEINLPWTTDVRKAF--------------TDALVFPL---GRLLEQLIE-----GREEQV 334 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + T + S D YL + + + FE D ++ PT + + Sbjct: 335 NDYVREMTTMSRSITLDE-YLASFDQLARMHHSLQDVFEDH-DALICPTLADNRW---LA 389 Query: 420 ENNSGSMGHIYNDVFTVAVNM-AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E + + N NM + P +SVP+ L +P GLQ++G + + + +G Sbjct: 390 EGSDTPYEDLMNAGMAYPFNMLSRHPVLSVPSGLASHGVPTGLQIVGPTYEDAVVMRIGA 449 Query: 479 IIEKEAGYFR 488 +E+E G+ R Sbjct: 450 ALEQELGWPR 459 >gi|91779085|ref|YP_554293.1| indole acetimide hydrolase [Burkholderia xenovorans LB400] gi|91691745|gb|ABE34943.1| putative indole acetamide hydrolase [Burkholderia xenovorans LB400] Length = 484 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 133/468 (28%), Positives = 211/468 (45%), Gaps = 79/468 (16%) Query: 52 ARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK 110 A AAA D G AR L G+ + +KD T G+ T A + L+GF P + Q+ Sbjct: 55 ALAAARRIDALPAAGKARLPLAGLAVVVKDNINTAGLQTSAGTPALEGFVPKTNAPSVQR 114 Query: 111 LWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA 168 L D GA++LGK NM E A G S+N ++ GPV +P+ D T PGGSSGG++AA+A Sbjct: 115 LIDAGAIVLGKANMHELAFGITSTNFATHAGPVRNPY---DPT--LIPGGSSGGTAAAIA 169 Query: 169 GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISFAPSLDQAGII 221 + A +GTDTGGS R PA+ TGTVG +P+ G ++ + + D G + Sbjct: 170 ARIAPAGLGTDTGGSTRIPAALTGTVGFRPSVGNGGAERRYHDPDAVVPISHTRDTVGPM 229 Query: 222 TRTVRDSAILLKAIAGYDECDATC-----VNLPVPDYERALDQSIQGMTVGIPKEYRLDY 276 RTV D A+L I G A + LP P +E GI ++ D Sbjct: 230 ARTVADIALLDGVITGAGALPAVALGGLRIGLPAPLWE------------GIERQVA-DV 276 Query: 277 LSPTIDKTWQQGISWLKDAGAKI--------VEISLPHTQYALPAYYIISPAEASSNLAR 328 + K G+ ++ A +++ I++ + + A+ + + A + Sbjct: 277 TQAALKKLEAAGVVFVPVAMSELDTLNGMVGGPIAVHEARDDVLAWLVANDAPVRTV--- 333 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS--HYLRARKIR 386 V R+ D+ +Y++ FG+ YD+ +Y R R Sbjct: 334 ---VEMAARIASPDVRAIYDDVLDDIFGER----------------YDAALNYWRPR--- 371 Query: 387 TLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNS-----GSMGHIYNDVF---TVA 437 ++R F ++ +D +L PTT +A P+ +S GS D F T Sbjct: 372 --LQRYMAATFADERLDALLFPTTRLAAVPIDDVNGSSTVSIDGSEPIDTMDAFLRNTDP 429 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + +G+P +S+PA + +P+GL+L G + L ++G E+ G Sbjct: 430 ASTSGIPGLSLPAGMTASGLPVGLELDGPLGEDRRLLAIGVAFEQLLG 477 >gi|154247986|ref|YP_001418944.1| amidase [Xanthobacter autotrophicus Py2] gi|154162071|gb|ABS69287.1| Amidase [Xanthobacter autotrophicus Py2] Length = 468 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 221/503 (43%), Gaps = 56/503 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E + M+ R + +++S VEL + + +NA+ + ++A AAA ++ Sbjct: 3 AEFDSMSALALRALVARREVSPVELTRRALDRAIATQPTLNAFFVIFEEEAMAAARVAED 62 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+P KD A KG + S + ++ ++ G +++G Sbjct: 63 AVMAGAPLGLIHGLPFSAKDLMAVKGAPYASGSRAMADNIAEVDAPAVERAKAQGGILIG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ G +PW TPGGSS G++A+VA + ++GTD Sbjct: 123 KTTTSEFGCKPIGDSPLTGITRNPWNL-----AMTPGGSSAGAAASVAAGITPFALGTDG 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P +F+G G+K +GR + S P+L G I R++ D+A+L A+AG+D Sbjct: 178 GGSIRIPCAFSGLSGLKGQFGRVP-VWPTSATPTLAHVGPIARSMADAALLFSAVAGHDR 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVPD A S+ G+ V + +P + + +D G + Sbjct: 237 RDPFAVAGPVPDVMGAALASVAGLRVAYSPTFGYARPAPEVLAATDRAARTFEDLGCHVE 296 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------- 353 ++ + PA+ + Y GV LR D+L EN R + Sbjct: 297 QVE---------QVFDTDPADLWTA-EFYAGVGTRLR----DVL---ENRRELLDPAVAD 339 Query: 354 ----GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 GQE+K +Y S + + LR K+R +R D++++P Sbjct: 340 ILMPALGQEMK------SYYAS--VFARYALR-EKMRLFFER---------YDLLISPVL 381 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVF-TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P SA G+ ++ + VF T N+ G PA +V A L + MP+GLQ++G+ Sbjct: 382 PVSALEAGRNLPEGLEDRNLVSWVFYTYPFNLTGQPAGAVCAGLSPEGMPIGLQIVGRSH 441 Query: 469 REETLFSVGQIIEK--EAGYFRP 489 E+ + E+ GY RP Sbjct: 442 CEDDVVRAAAAFERAQPPGYNRP 464 >gi|294827844|ref|NP_711514.2| amidase [Leptospira interrogans serovar Lai str. 56601] gi|293385689|gb|AAN48532.2| amidase [Leptospira interrogans serovar Lai str. 56601] Length = 494 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 141/499 (28%), Positives = 219/499 (43%), Gaps = 64/499 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R K I +ELV+S IQ IE N +NA I ++AR + S ++ NG R G+P Sbjct: 20 VRKKLIHPIELVESAIQRIETINPGLNAVITRFYEEAR---KTSKSKLPNGPFR---GVP 73 Query: 76 IGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD + G C S + +S ++L G + LG+ N+ EFA+ E Sbjct: 74 ILVKDMVHSIGGAPLTCGSKAFRNYISPQDSEFIKRLRKTGTIFLGQTNVPEFALMGITE 133 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YGP +PW + TPGGSSGGS+AAVA + + +D GGSIR PA + G Sbjct: 134 PKLYGPTRNPWNL-----ERTPGGSSGGSAAAVASGMVPVATASDGGGSIRIPAGYCGLF 188 Query: 195 GIKPTYGRC---SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KPT GR G S+D I++R++RDSA L A+ G ++ A P Sbjct: 189 GLKPTRGRTPVGPNFGRFWQGASVDH--ILSRSLRDSAAFLDALCGIEKSGAFSFEEPKT 246 Query: 252 DYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 +Y + +S + + + + + P ++ Q L G K+ E P A Sbjct: 247 NYLSEIKKSTGKLKIAFSTQSPIGTKVHPDCVESVIQTAKLLHSLGHKVEEKDAPIDGKA 306 Query: 311 LPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + +I + E ++ L + + G +V D+ + T +G + I G +V Sbjct: 307 IGRSFITMYFGEVAAQLKSLETI-LGRKVRMNDVEPV---TWILGL---LGRTISGGEFV 359 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS---- 425 L+ + +D L E F + DV LTPTT +G+ E G Sbjct: 360 LNLQEWDKAALA------------METFHETYDVYLTPTTAMPPSKIGELEPKLGEKIAM 407 Query: 426 --MGH--------------------IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +GH + FT N+ G P++S+P + ++PLGL Sbjct: 408 QIVGHLGLGKILFVSGLVDELVEKSLSRTPFTQLANLTGQPSVSIPLSQTSDRLPLGLLF 467 Query: 464 IGQPFREETLFSVGQIIEK 482 RE+ LF + +EK Sbjct: 468 TAARRREDILFRLSSQLEK 486 >gi|238787901|ref|ZP_04631697.1| Amidohydrolase, AtzE family [Yersinia frederiksenii ATCC 33641] gi|238723849|gb|EEQ15493.1| Amidohydrolase, AtzE family [Yersinia frederiksenii ATCC 33641] Length = 414 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 118/422 (27%), Positives = 188/422 (44%), Gaps = 48/422 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L IP +K+ F +G T A + + P ++ V +L GA++ G LNMD +A Sbjct: 21 LAAIPYAVKNLFDVEGHTTLAGASLFCERAPAKQDAVVISRLASQGAMLSGMLNMDAYAY 80 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + E S+YG +P R + + GGS+ +A + F S+G+DT GSIR PAS Sbjct: 81 GFTTENSHYGATRNP-RDLSRIAGGSSGGSAAAVAAGLVNF----SLGSDTNGSIRVPAS 135 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G+KPT+GR SR G F SLD G + R +D A++ A+ G D D+ P Sbjct: 136 LCGIFGLKPTFGRLSRRGTHPFVASLDHVGPMARCTQDLAVVYDAMQGADINDSFQSEKP 195 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 V L + QG+ + Y + D + + + EI + ++ Sbjct: 196 VTPCLSQLQRGQQGLRSAVLGGYFHQW----CDDDAKAAVQTVAKGLEASAEIEMLQSEL 251 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A A +IIS E G L + F + R++ G + Sbjct: 252 ARSAAFIISAVEG-----------------GNQYLPALRKSPQ-RFEPLSRERLLAGAML 293 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE---ENNS--- 423 + S Y++A++ R ++ FE D+++ P TP SA +G+E N S Sbjct: 294 PA-----SWYVQAQRFRHHFRQQILSLFEHW-DILIAPATPCSATLIGQEIMHINGSDLP 347 Query: 424 --GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 SMG + T ++ GLP ++VP +P+G+QLI P+RE+ +E Sbjct: 348 IRASMG-----MLTQPISFLGLPVVTVPLK-TAGGLPIGIQLIAAPWREDFCLRAAYALE 401 Query: 482 KE 483 ++ Sbjct: 402 QQ 403 >gi|163739846|ref|ZP_02147253.1| Amidase [Phaeobacter gallaeciensis BS107] gi|161386880|gb|EDQ11242.1| Amidase [Phaeobacter gallaeciensis BS107] Length = 442 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 135/470 (28%), Positives = 208/470 (44%), Gaps = 57/470 (12%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGI 78 DI V L +Y+ AI+ + Y V +A A AE + +R +G L +G+PI Sbjct: 20 DICPVALTKTYLNAIDAHPHRDRIYTVVTHDRALAEAEAARQRAADGQRLSLLDGVPISW 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETS 136 KD F + I T++ S +L P ++ V + GAV LGK +M E A N Sbjct: 80 KDLFDSATIATESGSDLLANRIPDRDALVLRSATAMGAVCLGKTHMSELAFSGLGLNPVK 139 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 P I D PGGSS G++ +VA L A IG+DTGGS+R PA++ G VG+ Sbjct: 140 ATPPCIH-------DDAAAPGGSSSGAATSVAFGLAACGIGSDTGGSVRIPAAWNGLVGL 192 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G++ D G + R+V D+A+ L + G PD A Sbjct: 193 KTTSGRISLEGVVPLCLRFDTVGPLARSVEDAALYLGVLEGNHG----------PDLRGA 242 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 S+ G L+P + + + L+ AGA+I+ + +P + A+ + Sbjct: 243 ---SLAGKRFADLWTVAQQDLAPEVANAHSKALDRLRAAGAEIIPLEVPVLEEAMALSAV 299 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + +EA YGL KD++E + E+ R G S Y Sbjct: 300 LFTSEA-----------YGLW---KDVIEAAPDL----MFPEILERFRSGAG-FSGPDYV 340 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF-- 434 + + + + R + D A G D IL PT+P P S +I++++ Sbjct: 341 AAWAKLEQFR--MDWDLATA---GFDGILCPTSPI--LPPNVARLQSDHDYYIHSNLMAL 393 Query: 435 --TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T N+ GL A+++P + GLQ++GQP EE L +G +E+ Sbjct: 394 RNTRIGNLMGLCALTLPTGVPS----CGLQILGQPDCEEALLRIGAAVER 439 >gi|317140133|ref|XP_001817996.2| amidase family protein [Aspergillus oryzae RIB40] Length = 510 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 132/522 (25%), Positives = 221/522 (42%), Gaps = 89/522 (17%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRI 63 + + + L + + V + +YI I NS + A + + +A +E + I Sbjct: 17 LTIPQYHSALIHRRTTCVATITAYITRIHQYNSTLKAILAINPNALHEAYQKDQELARGI 76 Query: 64 INGDA-------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 N DA R L G+PI +KD + T + T + L TV Q L NGA Sbjct: 77 DNTDAVNLELALRPLHGVPIILKDTYTTAFLPTTSGVRALRTLTTDTSCTVVQNLLSNGA 136 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++L K N+ EF++ +S G ++P+ D T TPGGSSGG++ A+A + Sbjct: 137 IILAKSNLHEFSLEGITLSSLGGQTLNPY---DLTR--TPGGSSGGTAVALAANMGLVGC 191 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G DT S+R PAS VG +PT G+ SR GI+ + D AG + RTV D IL +A+ Sbjct: 192 GGDTMNSLRSPASACSVVGFRPTRGQVSRKGIVPVTETQDVAGPMGRTVGDVRILFEAMR 251 Query: 237 GYDECDATCVNL---PVPDYERALDQSIQGMTVGIPKEYRLDYLSP---TIDKTWQQGIS 290 G D D +N P + R + +GI K+Y D + T++K ++ Sbjct: 252 GEDAGDPATLNALRRQSPSHTRT-----SKIKLGILKDYFSDGSTAEGLTVNKAIYDALT 306 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L I + +PH +P + ++ + A E + +L+ + N+ Sbjct: 307 RLGSNSPSIDLVEIPH----MPDWDVLLLRTKADTQA----------YEFRTVLDAFLNS 352 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 +++ HR + + +S Y+ + A +TL +F TPT+P Sbjct: 353 QTV----TTPHRSLAA--IAASGQYNPQAMTAVFDQTLQGDEF------------TPTSP 394 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAV-------------------------NMAGLPA 445 L K + GS+ + + A+ + G PA Sbjct: 395 EYYSRLEKIGSLKGSVERCFQEHGLTALVYPHQRQLVASVGCTVQPGRNGILAALTGRPA 454 Query: 446 ISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIE 481 I PA + +P+G++L+GQP++++ L + Q E Sbjct: 455 ICFPAGFSPETPSAPLGIPIGIELMGQPWKDQELLDLAQKFE 496 >gi|116255628|ref|YP_771461.1| hypothetical protein pRL110427 [Rhizobium leguminosarum bv. viciae 3841] gi|115260276|emb|CAK03380.1| half-amidase [Rhizobium leguminosarum bv. viciae 3841] Length = 456 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 198/470 (42%), Gaps = 46/470 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+V++ ++ VE+ ++ +I N + + ++ +A A S +R+ G Sbjct: 8 MSVAQLSVLIQGGAADPVEVAEAVFDSIANYADKA-VFTTLLESRAMEEARASSRRLRGG 66 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 + L +GIPI KD F +G+ T A S +L P ++ V L G V +G+ NM Sbjct: 67 RSLGLLDGIPIAWKDLFDIEGLPTTAGSVVLAKNMPAKRDAAVVALLRQAGMVAVGRTNM 126 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA +YG ++P R D PGGSS G+ AVA L ++GTDTGGS+ Sbjct: 127 SEFAFSGLGINPHYGTPVNP-RGTDLPR--IPGGSSSGAGVAVAAGLVPVAMGTDTGGSV 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G VG K T GR + G+ A SLD G + R+V D+ + DA Sbjct: 184 RIPAAFNGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVTDAVWI----------DAA 233 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L PD + +QG+ + +P+ D + ++ + L+ AGAK+ + Sbjct: 234 MRGLTAPDV---VAHPLQGLELIVPENIVFDGAEAGVVAAFEAALERLQKAGAKVARTVI 290 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P P + A + R+ G D + HR++ Sbjct: 291 PAFDEIFELMTRYGPLVTAEAFALHQE-----RLAGAD-------------ADRMDHRVV 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPLGKEENN 422 + T L S+ YL + R+ + E+ G ++ PT A P+G E + Sbjct: 333 MRTR-LGSKTTLPDYLAILEARSRL----IAVVERLVGDRLLAFPTVAHVAPPIGPLEQD 387 Query: 423 SGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 N T N +S+P E MP+GL L P R+ Sbjct: 388 DELFFATNNKTLRNTALGNFLDWCGVSIPCGTGEAGMPVGLLLSATPHRD 437 >gi|124505455|ref|XP_001351469.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Plasmodium falciparum 3D7] gi|23498227|emb|CAD49198.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Plasmodium falciparum 3D7] Length = 826 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/178 (46%), Positives = 105/178 (58%), Gaps = 9/178 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIPI IKD TKGI T+A S IL + P Y+STV +KL GAV++GK +MDEFAMG Sbjct: 243 LFGIPIVIKDNIITKGIPTKAGSQILLKYIPTYDSTVVKKLKKCGAVIIGKTHMDEFAMG 302 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S S +P+ + + GGS+ + + F C SI TDTGGSIR PA+ Sbjct: 303 SCTNKSK-----NPFNETILSCGGSSGGSASCVGSRI--FNC--SINTDTGGSIRTPAAL 353 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G +G KP+YGR SR GII + D G I V D +ILL A+ G D+ D T +N+ Sbjct: 354 CGCIGFKPSYGRISRYGIIPYNEETDVVGFIVNNVFDCSILLDALCGKDDRDITTINI 411 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 53/264 (20%) Query: 261 IQGMTVGIPKEYRLD--YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + +T G E L ++ I+K + I +K G+ +I LP+ YY+ S Sbjct: 545 LNNITFGYINENNLKEYFVDDIINKNYIYVIEGMKKLGSSFKQIELPNLIDYCYLYYLYS 604 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV----KHRIMIGTYVLSSR- 373 A+SNL+R +G+ Y + K+ +N RS V +I +Y + + Sbjct: 605 MTIANSNLSRINGINYNMHNINKE-SNFIKNVRSNLIDDHVLSRIISGSIISSYFQNKKN 663 Query: 374 --CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS-------- 423 Y + ++ I TL E F++GV+ IL P+ P S + NN+ Sbjct: 664 DITYIFYIMKEHLIYTL-----KEIFKKGVNYILLPSLPRSNNLKDNDHNNTNYSNEHLL 718 Query: 424 ------------------------GSMGHIYN----DVFTVAVNMAGLPAISVPAALCEK 455 + H YN ++F+V +++G P++ +P K Sbjct: 719 KKNITYEHKISTNDLDNYRDNIIINNTTHGYNKYMKEIFSVISSISGFPSMVIPVGTFTK 778 Query: 456 KM--PLGLQLIGQPFREETLFSVG 477 + PL Q+IG E L V Sbjct: 779 EFNEPLSFQIIGDNLNELGLLKVA 802 >gi|319795996|ref|YP_004157636.1| amidase [Variovorax paradoxus EPS] gi|315598459|gb|ADU39525.1| Amidase [Variovorax paradoxus EPS] Length = 504 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 54/498 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI---EVVAQKARAAAEES 59 ++ + S++ +L + +++ +LV +Y+ A + + +NA++ E A KA AA+ Sbjct: 30 DIATLTASDAVQQLCAGTVTSEQLVSAYL-AQAKAGANLNAFVTLDEAGALKAARAADAE 88 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 KR G + L G+P+ IKD +G+ A S L GF P ++ V KL GAV+L Sbjct: 89 RKR--GGACKPLAGLPVVIKDNIQVQGLPATAGSPALKGFVPTTDAPVVAKLRAAGAVIL 146 Query: 120 GKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 GK NM E A G + N GP + + D++ GGSS G+ AA+ + A++G Sbjct: 147 GKTNMHELAFGVTGYNPAFQTGPEVGVRNAYDASR--IAGGSSSGNGAALGARMAPAALG 204 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGS+R P +F G ++P+ GR S+ GI + + D AG + +++ D A+L + IAG Sbjct: 205 TDTGGSVRIPCAFNGCASLRPSMGRYSQQGIAPISHTRDTAGPMAQSMADVALLDRVIAG 264 Query: 238 ---YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D V L V +P Y L ++ L+ Sbjct: 265 GAPLKPADLKRVRLGV-----------------VPAFYA--NLDADTRAATDAALAKLRA 305 Query: 295 AGAKIVEISLP-----HTQYALPAYYIISPAEASSNLARY----DGVRYGLRVEGKDILE 345 AG +V++ +P + P + + + LA+Y D + + D+ Sbjct: 306 AGVTLVDVEMPKLMELNGAIGFPLALYEAHDDMVAYLAKYRTGIDIAQLTAGIASPDVKG 365 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVI 404 +E F K GT V + YD+ R R +++ + + F + +D + Sbjct: 366 TFE-----AFVIPRKLPAPNGT-VDAKPAYDNAM---RIARPALQKLYRDTFAKNKLDAL 416 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQL 463 + PT P A E ++ + G + + T + AG+P + +P+ L +P+GL+L Sbjct: 417 VFPTVPRVALAAAPEASSPENFGALIQN--TDPGSNAGIPGVQLPSGLGASSGLPIGLEL 474 Query: 464 IGQPFREETLFSVGQIIE 481 G + L +VG +E Sbjct: 475 DGPAGSDRKLLAVGLAVE 492 >gi|29377446|ref|NP_816600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit, putative [Enterococcus faecalis V583] gi|227554409|ref|ZP_03984456.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis HH22] gi|29344913|gb|AAO82670.1| glutamyl-tRNA(Gln) amidotransferase, A subunit, putative [Enterococcus faecalis V583] gi|227176450|gb|EEI57422.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis HH22] gi|315574996|gb|EFU87187.1| amidase [Enterococcus faecalis TX0309B] gi|315581118|gb|EFU93309.1| amidase [Enterococcus faecalis TX0309A] Length = 482 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 223/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S +EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRIELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIESFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|330899282|gb|EGH30701.1| amidase family protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 460 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 138/485 (28%), Positives = 215/485 (44%), Gaps = 50/485 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ LV +Q IE N +NA IE+ + AA+ +R Sbjct: 9 FESSVELQRRMSAGSLTSAGLVTDLLQRIEVLNKNGPALNALIEINPDALQIAAQLDGER 68 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI IKD T + T A + + G +++ V Q+L + GA+++GK Sbjct: 69 SRGEQRGPLHGIPIVIKDNLDTADRMQTTAGALAMVGAPAPHDAFVVQRLREAGAIIIGK 128 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W + P GSS GS+ A+A + Sbjct: 129 ANLSEWAHFRGYE------VPSGWSGRGGQTRHPYDLNADPLGSSSGSAVALAAGFSPLA 182 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G VG++PT GR SR G+I + D G + RTV D+AILL A+ Sbjct: 183 VGTETNGSIIQPAATSGVVGLRPTLGRLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 242 Query: 236 AGYDECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +G D D D +DQ ++ G +G D + D +Q+ Sbjct: 243 SGTDPLDDATAR-ACADTVNYVDQLRADALNGKRLGYSSRTH-DGMLMDDDPEFQEVKGR 300 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L AGA +V + +P + P Y ++ + L Y R GL V D + + NT Sbjct: 301 LSSAGAILVPVEVPSID-STPEYRVLL-HDFKRELNAYLSTRTGLGVSTLDDIIAF-NTA 357 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 S G Q ++I + V + +YL A +RT A Q +D +L Sbjct: 358 SDG-AQAYDQDLLIDSSV--ATLDQENYLSIATHLRT--------AHRQLIDGLL----- 401 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++++ ++ F +AG P I+VP L E +P GL + + E Sbjct: 402 --------QQHSLDALIDWSEVSFKAVGAIAGYPGITVPVGLEENGLPRGLYFLSTAWDE 453 Query: 471 ETLFS 475 L S Sbjct: 454 ADLLS 458 >gi|254511785|ref|ZP_05123852.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Rhodobacteraceae bacterium KLH11] gi|221535496|gb|EEE38484.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [Rhodobacteraceae bacterium KLH11] Length = 455 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 129/475 (27%), Positives = 213/475 (44%), Gaps = 46/475 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NGDARDLEGI 74 L S + VEL +Q E S + + ++ ++A + A+ S +R+ N L+G+ Sbjct: 19 LASGSVDPVELTRYVLQRAEASKAD-SVFLSTTPERALSEAKASARRLAQNRPLSPLDGV 77 Query: 75 PIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 PI +KD +G T A S + D ++ V Q L G + +GK+N+ EFA Sbjct: 78 PISLKDLIDLEGEVTTAASALYRDAPAAKRDAIVAQNLSAAGMICIGKVNLTEFAYSGIG 137 Query: 134 ETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G I+P S D PGGSS G++ +++ + SIG+DTGGS+R PASF G Sbjct: 138 LNPHFGTAINPL----SPDVPRAPGGSSSGTAVSISSGIVPCSIGSDTGGSVRIPASFNG 193 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG K + GR S G+ + + D G + R+V D +L A+ G P Sbjct: 194 LVGYKSSEGRISTQGVFALSRMFDTMGPLARSVEDCVLLDAAMRGQAG----------PA 243 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 +RA I+G+T+ +P +D L+P + + ++ ++ L+ AGA + L H P Sbjct: 244 VQRA---GIKGLTIIVPDTVVMDDLAPAVARNYEATLNRLEQAGAVLQRRPL-H-----P 294 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 +I +L D VE + I+E + + + V RI+ G + ++ Sbjct: 295 FAEVIRLTAEYGSLVAADAY-----VEHRGIVESADRAQ---VDRRVMARILGGKSMSAA 346 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 R RK++ I+ EA I PTT +A + E + + H N Sbjct: 347 DVVTLQRAR-RKLQGWIRDTVGEAL------IAMPTTAITAPEIAPLEADD-ELFHKTNM 398 Query: 433 VF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + T N LP +++P E MP + R++ L G +E+ A Sbjct: 399 LVLRNTSLGNFLDLPGLALPNGQDENGMPTSILFSAVSGRDDALLGYGFQLEQVA 453 >gi|83765851|dbj|BAE55994.1| unnamed protein product [Aspergillus oryzae] Length = 548 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 132/522 (25%), Positives = 221/522 (42%), Gaps = 89/522 (17%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRI 63 + + + L + + V + +YI I NS + A + + +A +E + I Sbjct: 55 LTIPQYHSALIHRRTTCVATITAYITRIHQYNSTLKAILAINPNALHEAYQKDQELARGI 114 Query: 64 INGDA-------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 N DA R L G+PI +KD + T + T + L TV Q L NGA Sbjct: 115 DNTDAVNLELALRPLHGVPIILKDTYTTAFLPTTSGVRALRTLTTDTSCTVVQNLLSNGA 174 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++L K N+ EF++ +S G ++P+ D T TPGGSSGG++ A+A + Sbjct: 175 IILAKSNLHEFSLEGITLSSLGGQTLNPY---DLTR--TPGGSSGGTAVALAANMGLVGC 229 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G DT S+R PAS VG +PT G+ SR GI+ + D AG + RTV D IL +A+ Sbjct: 230 GGDTMNSLRSPASACSVVGFRPTRGQVSRKGIVPVTETQDVAGPMGRTVGDVRILFEAMR 289 Query: 237 GYDECDATCVNL---PVPDYERALDQSIQGMTVGIPKEYRLDYLSP---TIDKTWQQGIS 290 G D D +N P + R + +GI K+Y D + T++K ++ Sbjct: 290 GEDAGDPATLNALRRQSPSHTRT-----SKIKLGILKDYFSDGSTAEGLTVNKAIYDALT 344 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L I + +PH +P + ++ + A E + +L+ + N+ Sbjct: 345 RLGSNSPSIDLVEIPH----MPDWDVLLLRTKADTQA----------YEFRTVLDAFLNS 390 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 +++ HR + + +S Y+ + A +TL +F TPT+P Sbjct: 391 QTV----TTPHRSLAA--IAASGQYNPQAMTAVFDQTLQGDEF------------TPTSP 432 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAV-------------------------NMAGLPA 445 L K + GS+ + + A+ + G PA Sbjct: 433 EYYSRLEKIGSLKGSVERCFQEHGLTALVYPHQRQLVASVGCTVQPGRNGILAALTGRPA 492 Query: 446 ISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIE 481 I PA + +P+G++L+GQP++++ L + Q E Sbjct: 493 ICFPAGFSPETPSAPLGIPIGIELMGQPWKDQELLDLAQKFE 534 >gi|291006436|ref|ZP_06564409.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Saccharopolyspora erythraea NRRL 2338] Length = 430 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 126/475 (26%), Positives = 211/475 (44%), Gaps = 64/475 (13%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 RLRS +A ELV + A NS + A++E++ ++A A +D+ + G R L G Sbjct: 11 RLRSSGTTATELVARALDAARNSAT--GAFVELLPERAAQDAAVADRELAGGTDRGPLHG 68 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ +KD G T+ + L ++ + +L D GAV++GK E A Sbjct: 69 IPVAVKDNIDVAGAWTRCGTRDLGHHCAERDAAIVSRLRDAGAVVIGKTRTHELA----- 123 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G V R+ + T G S G ++A G + A +GTDTGGSIR PA+ G Sbjct: 124 ----WGMVTPGCRNPLDPARITGGSSGGSAAAVAEGVVPVA-LGTDTGGSIRNPAALCGV 178 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VGIK G G+ AP+ D G++ TV D + L + P Sbjct: 179 VGIKAGVGTLPTDGVAPLAPTQDAPGVLGATVSDCRVALTVLGAEPSG---------PPV 229 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 R VG+ +++ + P + + L++AG + VE+++ ++ A+ A Sbjct: 230 RR----------VGVIRDHWARRVEPPVAAAIDDAVLRLREAGVEAVEVAVRNSDLAMAA 279 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y+I AE++ + D + G +V +D+L L +R Sbjct: 280 SYVIMLAESARHWWPADPDQVGPQV--RDVLR------------------------LGAR 313 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIY-- 430 D+ Y RA +R I +AF Q VD +L ++P A +G E +G M + Sbjct: 314 VADADYRRALAVRRSIIAGLDDAFGQ-VDALLMASSPVLASRIGDELTGCAGRMLPVQAA 372 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + T +++G+PA+SVP + +P G+Q + + L +++E+ G Sbjct: 373 HASATSLASVSGVPALSVPGLPGPEGLPTGVQFLAP--TTDPLLRCAELLERGRG 425 >gi|330977139|gb|EGH77097.1| amidase family protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 515 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 134/498 (26%), Positives = 214/498 (42%), Gaps = 62/498 (12%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ LV +Q IE N +NA IE+ + AA+ +R Sbjct: 42 FESSVELQRRMSAGSLTSAGLVTDLLQRIEVLNKNGPALNALIEINPDALQIAAQLDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI IKD T + T A + + G +++ V Q+L + GA+++GK Sbjct: 102 SRGEQRGPLHGIPIVIKDNLDTADRMQTTAGALAMVGAPAPHDAFVVQRLREAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W + P GSS GS+ A+A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSGRGGQTRHPYDLNADPLGSSSGSAVALAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G VG++PT GR SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVVGLRPTLGRLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECDATCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +G D D D +DQ ++ G +G + D + D +Q+ S Sbjct: 276 SGTDPLDEATAR-ACADTVNYVDQLRADALNGKRLGY-SSHTHDGMLMDDDPEFQKVKSR 333 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L AGA +V + +P + P Y + L + K L Y +TR Sbjct: 334 LSSAGAILVPVDVPSID-STPEYRV-------------------LLHDFKRELNAYLSTR 373 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE-------AFEQGVDVI 404 ++ + I T ++ YD L TL + ++ A Q +D + Sbjct: 374 TVLGVSTLDDIIAFNTASDGAQAYDQDLLIDSSGATLDQENYLSIATHLRTAHRQLIDGL 433 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L ++++ ++ F +AG P I+VP L E +P GL + Sbjct: 434 L-------------QQHSLDALIDWSEVSFKAVGAIAGYPGITVPVGLEENGLPRGLYFL 480 Query: 465 GQPFREETLFSVGQIIEK 482 + E L S +E+ Sbjct: 481 STAWDEADLLSYAYALEQ 498 >gi|149915473|ref|ZP_01904000.1| amidase family protein [Roseobacter sp. AzwK-3b] gi|149810762|gb|EDM70603.1| amidase family protein [Roseobacter sp. AzwK-3b] Length = 443 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 138/495 (27%), Positives = 220/495 (44%), Gaps = 62/495 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E M+ +E + DI V L ++Y+ AIE ++ Y V A++ARA A + Sbjct: 1 MTEWLSMSAAELGRGIGKGDIDPVALTETYLDAIEGHAARDRIYSVVTAERARAEARAAS 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G L+G+PI KD F T G+ T+A + +L G P ++ V + G V L Sbjct: 61 DRARAGLRLGPLDGVPISWKDLFDTAGVATEAGTRLLAGRVPERDARVLRNATRAGLVCL 120 Query: 120 GKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 GK +M E A N + P ++ + PGGSS G++A+VA L A IG Sbjct: 121 GKTHMSELAFSGLGLNPMTATPPCVN-------DAEAVPGGSSSGAAASVAFGLAACGIG 173 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+R PA++ VG+K T GR S G++ A D G + RTV D+A++L A+ G Sbjct: 174 SDTGGSVRIPAAWNDLVGLKTTAGRVSLDGVVPLAEKFDTVGPLARTVEDAALMLAALEG 233 Query: 238 YDECDATCVNLPVPDYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + RA D S++G + + LD + P ++ ++ L+ Sbjct: 234 HG---------------RAADLRGASLKGRRLAALRTVVLDDIRPEPLAAYEAAVARLEA 278 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AGA I + P A+P ++ AEA + + ILE + R + Sbjct: 279 AGAIIEPVEAPELLEAMPMSGVLYTAEAYGTWSEV--IEAAPDKMFAPILERFRGGRDV- 335 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + Y + + R ++R++ A G D ++ PT P Sbjct: 336 ----------------PAAAYVAAWRRLEELRSVW-----HARMAGYDAVIMPTAPN--L 372 Query: 415 PLGKEENNSGSMGHIYNDVFTV----AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P + ++ ++ T+ N+ GLPA+S+PA + G+ L G P RE Sbjct: 373 PPDAAKLMQDDAYYVTENLLTLRNTRVGNLMGLPAVSLPAG----RPSCGVMLCGAPMRE 428 Query: 471 ETLFSVGQIIEKEAG 485 E L + + E G Sbjct: 429 ERLLRLCKAAEAALG 443 >gi|299770092|ref|YP_003732118.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter sp. DR1] gi|298700180|gb|ADI90745.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter sp. DR1] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 128/486 (26%), Positives = 220/486 (45%), Gaps = 53/486 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 ++ + +S ELV Y IE S +NA+I A A+ DK +++G L GI Sbjct: 28 IQERKVSCEELVHHYFATIEKQQS-LNAFISTDKNSAIQQAQYWDKYLLSGKPCPVLMGI 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD +G A + L F+P + + QKL D+GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVEGFPNSAGTPALANFKPQSSAPIIQKLIDHGAIIVGKTNMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ +++ GGSS GS+ AVA + +IGTDTG S+R P++ G Sbjct: 147 NTAMHIEGVVGTRNAVNPL--HIAGGSSSGSAVAVAAGMVPIAIGTDTGASVRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +PT GR S+ I + + D AG I TV D ++ + I + P+ Sbjct: 205 CAGFRPTVGRYSQNSITPISHTRDTAGPIAHTVSDIILIDQLITQKPKKK------PLQP 258 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++ + +GI Y ++L + + + LK+AG +I+ + +P+ + Sbjct: 259 HQ---------IRLGI-NPYFWNHLDEDVHEQAHIALGLLKEAGVEIINVDMPNLEQL-- 306 Query: 313 AYYIISPAEASSNLARYDGVRY------GLRVEGKDILEMYENTRSIGFGQEVKHRIM-- 364 + I P +YD ++Y L +E + ++I F Q + +++ Sbjct: 307 NHAISFPVVVYE--GKYDLIQYLKHHHVNLTIENVVDQISSPDVQAI-FKQNIVPQLIQD 363 Query: 365 -IGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 G V Y+ AR ++ L + F + +L PT+P A PL E+ + Sbjct: 364 QTGQLVPVLPFYEKAISEARPQLLELYQNTFK---AHNLHALLFPTSPIVA-PLANEQVS 419 Query: 423 SGSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSV 476 S + T+ N GLP +S+P K K+ +GL++ G P + + ++ Sbjct: 420 S------IENFQTLIRNTDPGSNIGLPGLSLPIGKGAKSKLAVGLEIDGLPHHDSEIIAI 473 Query: 477 GQIIEK 482 G +E+ Sbjct: 474 GMTLEE 479 >gi|311103781|ref|YP_003976634.1| amidase [Achromobacter xylosoxidans A8] gi|310758470|gb|ADP13919.1| amidase family protein 3 [Achromobacter xylosoxidans A8] Length = 472 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 144/497 (28%), Positives = 218/497 (43%), Gaps = 58/497 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS++ F +SE L S+VEL Y+ I+ +N + AY+ V + A AE +D Sbjct: 1 MSDIAFATLSELAQGLAEGRYSSVELARHYLDRIDRANPALGAYVSVDREGALRLAEAAD 60 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R G L+G+P+ +KD +G T A S R +T +L D G V+ Sbjct: 61 ARRRAGYGLLGPLDGLPVAVKDLCDIQGQVTTAGSQAWRERRSTVTATPVTRLVDAGMVV 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK +M EFA G G +PW D PGGSS GS AVA L A++G+ Sbjct: 121 LGKTHMVEFAFGGWGTNPVMGTPRNPW---DLVRARIPGGSSSGSGVAVAAGLAPAALGS 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA+ G G+K T G S G ++ + +LD G +TR RDS +L A++G Sbjct: 178 DTGGSVRIPAALNGITGLKTTRGLISLYGSVALSHTLDSIGPLTRDTRDSLLLTAAMSGP 237 Query: 239 DECDATCVNLPVPDYE--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS----WL 292 D D +P Y RA + + G + + + + ID Q + L Sbjct: 238 DPRDPVTRGVPAYRYRDPRAGAKPLAGTRIALMPQAQYPI---AIDAAVQNALDDTRRAL 294 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM--YENT 350 D GA+ VE P + + +R GL + + + Y Sbjct: 295 ADLGAECVEAPFPFDFHDM-------------------MLRNGLIIAAEAYAQHRDYIED 335 Query: 351 RSIGFGQEVKHRIMIGT------YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 S+ G+ V+ RI+ G YVL+ + + RA + RD+ D + Sbjct: 336 DSLPLGRYVRARILGGKQTSAADYVLALQA----HARACEAWQDWMRDY--------DAV 383 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L P P +A PL + + + FT N +++PA MP+G+QL+ Sbjct: 384 LAPCLPFAACPLEDVDEAATPLA-----AFTRPGNYVNASGLALPAGFSADGMPIGVQLL 438 Query: 465 GQPFREETLFSVGQIIE 481 G+P E+ L +G + Sbjct: 439 GKPNGEDALGRIGMAFQ 455 >gi|224105227|ref|XP_002313733.1| predicted protein [Populus trichocarpa] gi|222850141|gb|EEE87688.1| predicted protein [Populus trichocarpa] Length = 527 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 23/310 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +++ +LVD YI I+ N +++ IEV AR A+ +D+ Sbjct: 36 IEEIQQAFAENKLTSTQLVDFYITQIKTLNPLLHSIIEV-NPDARDQAKNADEERRENQG 94 Query: 69 R----DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 R DL GIP+ +KD TK ++T A S+ L G +++V +KL GAV++GK + Sbjct: 95 RRSLGDLHGIPVLLKDTIGTKDKLNTSAGSYALVGSVVARDASVVEKLRKAGAVIMGKAS 154 Query: 124 MDEFAMGSSNETSYYGPVISPW--RSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIG 177 + E+ S V + W RS + + P GSS GS+ +VA + A S+G Sbjct: 155 LSEWYKFRS-----LSHVPNGWCARSGQGVNPYLVTGDPCGSSSGSAISVAANMVAVSLG 209 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI P+ VG+KPT G SR G+I APSLD G +TRTV D+ +L I G Sbjct: 210 TETHSSIICPSDHNSVVGLKPTVGLTSRAGVIPVAPSLDTIGPVTRTVSDAVRVLDVIVG 269 Query: 238 YDECDATCVN-----LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +D D +P Y++ L+ ++G +GI + L L+ +I ++ ++ Sbjct: 270 FDPRDYEATQRAAKFIPAGGYKQFLNPNGLKGKILGIVRNPFLKSLNESIFPIFEHHLNT 329 Query: 292 LKDAGAKIVE 301 L++ GA +V+ Sbjct: 330 LRERGATVVD 339 >gi|256962835|ref|ZP_05567006.1| amidase [Enterococcus faecalis HIP11704] gi|307274307|ref|ZP_07555507.1| amidase [Enterococcus faecalis TX0855] gi|256953331|gb|EEU69963.1| amidase [Enterococcus faecalis HIP11704] gi|306509031|gb|EFM78101.1| amidase [Enterococcus faecalis TX0855] Length = 482 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 223/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S +EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRIELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQ-----DTLFAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIESFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQITPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|163794903|ref|ZP_02188872.1| Amidase [alpha proteobacterium BAL199] gi|159179722|gb|EDP64249.1| Amidase [alpha proteobacterium BAL199] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 209/505 (41%), Gaps = 66/505 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL +E L++ +++ +L+D+ I +NA + ++AR A+ Sbjct: 15 SELIAKTATEIVALLKAGEVTTFDLLDALEVRIAEVEPAVNALPTLCFERARDRAKSLAG 74 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + + + L G+P+ IKD G+ + S I P L G V+ K Sbjct: 75 KPMT-ERGVLAGMPVAIKDLLNVAGVRSTQGSPIFADTVPDTSDVAVTTLEAAGGVVYAK 133 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF G++ +G ++PW + S GSSGGS+ A+A + G+D G Sbjct: 134 SNTPEFGAGANTFNEVFGATLNPWDTSRSC-----AGSSGGSAVALASGTAWLASGSDLG 188 Query: 182 GSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PASF G VG +PT GR + G + F S+ G + RTV D A++L A+ G Sbjct: 189 GSLRNPASFCGIVGFRPTPGRVAHGPGALPFG-SMSVEGPMARTVADCALMLDAMTGQSP 247 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D + P QS T K R+ + ++D GI+ + A IV Sbjct: 248 VDPMSLERPA--------QSFVSSTASGRKPKRVAF---SLD---LGGITPVDPEVATIV 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE-- 358 E A+ V + D+ ++++ R++ F Sbjct: 294 E-------------------RAARRFEEIGCVVEEASPDFSDVQQIFQTLRAMAFAASKK 334 Query: 359 ---VKHR----------IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 V+HR I G + + + R R L R AF + D++L Sbjct: 335 DLLVRHRDQLKPEVIWNIEKGLALSTEEVAAAELARGR----LYHR--VRAFYETYDLVL 388 Query: 406 TPTTPTSAFPLGKE--ENNSGSMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPLGL 461 +P T +P+ + E +G Y + TV A A LPAISVPA +P+GL Sbjct: 389 SPATIAPPYPIEQRYLEECNGHRFSKYIEWCTVAYAFTCAALPAISVPAGFTAGGLPVGL 448 Query: 462 QLIGQPFREETLFSVGQIIEKEAGY 486 Q+ G P E + S + E+ A + Sbjct: 449 QIAGPPRGEAAVLSAAALFEQVAPW 473 >gi|148545903|ref|YP_001266005.1| putative amidase [Pseudomonas putida F1] gi|148509961|gb|ABQ76821.1| Amidase [Pseudomonas putida F1] Length = 469 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 140/472 (29%), Positives = 212/472 (44%), Gaps = 39/472 (8%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIP 75 + + +S VE+VD + I+ N +NAY V + ARAAA S++R G L+G+P Sbjct: 20 QRRQLSPVEVVDDVLARIDLHNPAVNAYCHVDGEGARAAARASEQRWQRGQPCGRLDGVP 79 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD T+G+ T+ S G P ++ + + + GAV++GK EF + Sbjct: 80 ASIKDLTLTRGMPTRKGSRTTSGSGPWEIDAPFSAFMREAGAVLVGKTTTPEFGWKGVTD 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG +PW + + T GGSSGG++AA A L G+D GGSIR P +FTGT Sbjct: 140 NPLYGITRNPWDT-----RLTAGGSSGGAAAAAALNLGVLHQGSDAGGSIRIPCAFTGTF 194 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPT+G + + L G +TRTV DS ++L +A D D P Sbjct: 195 GIKPTFGYVPQWPASAMT-VLSHLGPMTRTVDDSVLMLDCVARPDARDG-LAGAPRQAPW 252 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + Q + G+ + + ++P I Q + L GA++ E+ P + Sbjct: 253 LSQQQDLSGLRIAYSANFGYVQVAPQIQALVAQAVQRLARLGAQVEEVD--------PGF 304 Query: 315 YIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 P E + L R L E K +L+ R I E +I +G Y Sbjct: 305 S--DPLETFNTLWFAGAARLASALSDEQKALLD--PGLRWIA---EQGAQISLGEY---- 353 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYN 431 + L AR LI + AF Q DV+++P P AF G SG + Sbjct: 354 ----TQALEARA--ELIAK--MNAFHQRYDVLVSPMLPLVAFEAGHNVPPGSGMAQWMEW 405 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 F+ N+ PA SVP + +P+GLQ++ F +E + V ++ E+ Sbjct: 406 TPFSYPFNLTQQPAASVPCGFTREGLPVGLQVVAGRFADEQVLRVCKVYEQH 457 >gi|148253427|ref|YP_001238012.1| putative amidase [Bradyrhizobium sp. BTAi1] gi|146405600|gb|ABQ34106.1| putative amidase [Bradyrhizobium sp. BTAi1] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 128/484 (26%), Positives = 215/484 (44%), Gaps = 58/484 (11%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIP 75 R K + V++V+ I A++ ++++ N + + ++ARA A+ + G+ L G+P Sbjct: 30 RRKRFTPVDVVEDVIAALDATHTRCNVVVTAMYEQARADAKRLAAAMRAGEPCGPLAGVP 89 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IKD G+ A S + F P ++ V L GA++ K E + ++ Sbjct: 90 VTIKDLVFVAGVPAYAGSPMNKSFVPDADAAVVSALKAAGAIITCKTTTCESGYKLTADS 149 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA-SIGTDTGGSIRQPASFTGTV 194 G +PW ++ S G +AA C +IGTD GSIR P+SF G Sbjct: 150 PVTGLTRNPWNPAHTSG------GSSGGAAAAVASGCGPIAIGTDGVGSIRVPSSFCGVF 203 Query: 195 GIKPTYGRCSRLGIISFAP----SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G+KPT+G R FAP SL G ITRTV D+A+ L+ IA +D DA + + Sbjct: 204 GLKPTFGLVPRSP--GFAPPSWASLAHTGPITRTVADAALALETIAIHDLRDAASLAV-- 259 Query: 251 PDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV----EIS 303 ER D S + G+ +G + ++P + + + ++ L+D GA+I I Sbjct: 260 --AERRFDASPRPLTGLRIGASADLGYAAVAPDVRAAFAKAVAVLEDCGARISGDHPGID 317 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 + L I A A ++ G ++ + + R + Sbjct: 318 SRILERTLKPIAFIEQAAAVAHK------------TGDELADCDTDYRDV---------- 355 Query: 364 MIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---- 418 + + R Y Y+ A RT ++ F + F + VD ++TPT +AF G+ Sbjct: 356 -----IAAGRSYAGVDYVEAGYRRTQMRAAFVDLFSR-VDALVTPTVAVTAFGAGQLGVA 409 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + H+ F+ +N+AGLPA +VP +P+GLQ+I E T+F + Sbjct: 410 SIDGTPVDPHLGWSPFSWPINLAGLPAATVPCGFDRDGLPIGLQIIAPWLDEPTIFKIAA 469 Query: 479 IIEK 482 E+ Sbjct: 470 AFEE 473 >gi|186472331|ref|YP_001859673.1| amidase [Burkholderia phymatum STM815] gi|184194663|gb|ACC72627.1| Amidase [Burkholderia phymatum STM815] Length = 484 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 125/470 (26%), Positives = 208/470 (44%), Gaps = 79/470 (16%) Query: 50 QKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT 108 + A AAA D AR L G+P+ IKD T G+ T A + LDGF+P ++ Sbjct: 53 EGALAAANRIDALPAGEKARLPLAGLPVVIKDNINTAGLLTSAGTPALDGFKPKTDAPSV 112 Query: 109 QKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAA 166 +KL D GA++LGK NM E A G S+N + GPV +P+ GGSSGG++ A Sbjct: 113 RKLIDAGAIVLGKTNMHELAFGITSANLAPHAGPVRNPYDP-----SLIAGGSSGGTAVA 167 Query: 167 VAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR-------LGIISFAPSLDQAG 219 VA + A +G+DTGGS R PA+ TG G +P+ G ++ + + D G Sbjct: 168 VAARISPAGLGSDTGGSTRIPAALTGIAGFRPSVGNGGAERRYHDPQAVVPISHTRDTVG 227 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + RTV D A+L I G DA +PD + + + +G+P+ + L Sbjct: 228 PMARTVADVALLDGVITG----DAA-----LPDVQ------LSALRIGLPEPLWAE-LER 271 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLP-----HTQYALPAYYIISPAEASSNLARYDGV-- 332 ++ ++ + L+ AG V +++P + Q P + + L D Sbjct: 272 ATEEVARRALVKLEAAGVTFVSVAMPDLLRLNEQTGGPIAIHEALEDVRDYLVANDAPVK 331 Query: 333 ---RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 R+ D+ E+Y+ + Q+ + H R + + Sbjct: 332 TVGEIAARIASPDVREIYDVVLADALAQQYPAAL--------------HTWRPQ-----L 372 Query: 390 KRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSM-------------GHIYNDVFT 435 ++ + + F + +D +L PTT A P+ +E N S+ ++ N T Sbjct: 373 QQHYADTFAAERLDALLFPTTRLVAVPI--DEVNGSSIVSIDGAPAIEEMTAYLRN---T 427 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + AG+P +S+ A L ++ +P+G++L G + L ++G E G Sbjct: 428 DPASNAGIPGLSLAAGLTQEGLPVGIELDGPLGSDRRLLAIGIAFEALLG 477 >gi|296391046|ref|ZP_06880521.1| amidase [Pseudomonas aeruginosa PAb1] Length = 494 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 130/465 (27%), Positives = 214/465 (46%), Gaps = 48/465 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + A+ + A A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLAQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT GI T S + G P +++ V +++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 Y P+ R+ + GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 ----YNPLFGTTRNAYDPARIA-GGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNV 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ GR F L G + R+V D A LL AGYD C + + Sbjct: 201 YGFRPSQGRVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRD---- 256 Query: 252 DYERALD---QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHT 307 D R D + +G +G +Y YL ++G+ L +A E+ Sbjct: 257 DPRRFADDPGRDFRGARLGWLGDY-AGYLP------MEEGVLELCEAALGDFAELGC-DV 308 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIG 366 + LP Y + L R V V+G + E+Y + R + E + + G Sbjct: 309 EACLPDYPL-------ERLWRTWLVHRQWLVQGS-LGELYADPARRVRLKPEAQWEVESG 360 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENN 422 + ++ Y RA R+ R FE+ D +L P+ FP E Sbjct: 361 LGLGAAEVY-----RASLDRSDWYRALARLFER-YDFLLLPS--AQVFPFDAETAWPRQV 412 Query: 423 SGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 +G Y+ V + +AGLPAISVP +P+GLQ+IG Sbjct: 413 AGRPMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLPMGLQIIG 457 >gi|255970809|ref|ZP_05421395.1| amidase [Enterococcus faecalis T1] gi|256958264|ref|ZP_05562435.1| amidase [Enterococcus faecalis DS5] gi|300861272|ref|ZP_07107359.1| amidase [Enterococcus faecalis TUSoD Ef11] gi|307274387|ref|ZP_07555571.1| amidase [Enterococcus faecalis TX2134] gi|307289727|ref|ZP_07569665.1| amidase [Enterococcus faecalis TX0411] gi|312951785|ref|ZP_07770677.1| amidase [Enterococcus faecalis TX0102] gi|255961827|gb|EET94303.1| amidase [Enterococcus faecalis T1] gi|256948760|gb|EEU65392.1| amidase [Enterococcus faecalis DS5] gi|300850311|gb|EFK78061.1| amidase [Enterococcus faecalis TUSoD Ef11] gi|306499183|gb|EFM68660.1| amidase [Enterococcus faecalis TX0411] gi|306508897|gb|EFM77983.1| amidase [Enterococcus faecalis TX2134] gi|310630273|gb|EFQ13556.1| amidase [Enterococcus faecalis TX0102] gi|315036552|gb|EFT48484.1| amidase [Enterococcus faecalis TX0027] gi|315153365|gb|EFT97381.1| amidase [Enterococcus faecalis TX0031] gi|315160049|gb|EFU04066.1| amidase [Enterococcus faecalis TX0312] gi|315169185|gb|EFU13202.1| amidase [Enterococcus faecalis TX1341] gi|323478927|gb|ADX78366.1| amidase family protein [Enterococcus faecalis 62] gi|327536118|gb|AEA94952.1| amidase [Enterococcus faecalis OG1RF] Length = 482 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 223/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S +EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRIELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|310816380|ref|YP_003964344.1| amidase [Ketogulonicigenium vulgare Y25] gi|308755115|gb|ADO43044.1| amidase [Ketogulonicigenium vulgare Y25] Length = 451 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 147/477 (30%), Positives = 227/477 (47%), Gaps = 59/477 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 + A LV + + +E + S ++AY+ A A AAAE SDKR G AR L+G+P +K Sbjct: 6 LDARTLVQATLTRLEQTESHIHAYLRHDADAALAAAEASDKRRKAGAARGPLDGVPFAVK 65 Query: 80 DCFATKGIHTQACSHILDGFRPHY--ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 D G T A S + +P +S + +L GA+++GK N E+ G+S S+ Sbjct: 66 DNMDALGFATTAASRVP---QPPVTADSAIVARLRAAGAILIGKANTWEYGTGNS-AVSF 121 Query: 138 ---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 P +PW T SS GS+AAVA + SIGTD+GGS+R PA+ G V Sbjct: 122 DLPTPPARNPWNPAHYTGG-----SSSGSAAAVAAGSASFSIGTDSGGSVRLPAAGCGIV 176 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPT+GR SR GI+ S D G +T TV D+AI+ AIAG+D D + Sbjct: 177 GLKPTFGRISRAGIMPNCWSFDTPGPMTWTVEDAAIVYDAIAGHDAADPVSLTTDFIRTA 236 Query: 255 RALDQSIQGMTVGIPKEYRLDYL--SPTIDKTWQQGISWLKDAGAKI--VEISLPHTQYA 310 L+QSI G+ VG+ D+ SP I + L+ GA + +++ LP ++Y Sbjct: 237 AGLNQSIAGLRVGLIGALD-DHAPSSPEISGALAKAADMLRALGATVQPLKMPLPPSRY- 294 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + +P S + + ++ D L M+ + G ++ ++ G Y+ Sbjct: 295 ---REVATPINWSESFSIHE----------SDYL-MHRDL----MGAALREKLETGMYM- 335 Query: 371 SSRCYDSHYLRA-RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN----NSGS 425 R D YL A R+ R L+ T+A VD++L P TP +A + + + S Sbjct: 336 --RAAD--YLAALRERRRLVIA--TDALFGTVDLLLLPMTPFAAPQITDDARVRAFTTAS 389 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 G + ++ G PA+S+P +PL +QL +E L +E+ Sbjct: 390 AGSPF--------SLTGHPALSLPVGAAPDGLPLAVQLAAGFHQEHLLLRAAHQLEQ 438 >gi|76156066|gb|AAX27303.2| SJCHGC04263 protein [Schistosoma japonicum] Length = 238 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 114/219 (52%), Gaps = 15/219 (6%) Query: 281 IDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL--- 336 I TW WL + + + LPHT A Y ++ E +SN+ARYDG++YG Sbjct: 9 ICSTWDTVAGWLANKLSCSVCLVRLPHTPMATTVYSVLCATEVASNMARYDGLKYGFSTI 68 Query: 337 -------RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL-RARKIRTL 388 V ++ Y +TRS+GFG V+ RI G + L R YL AR++ L Sbjct: 69 KLSNHHENVLPENTTIQYSSTRSLGFGDVVRGRIFAGNFFL-LRDQQCRYLDAARRLWRL 127 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISV 448 IK DFT+ FE VD +LTP +P+ + + +DV TVAVN++GLPA+S Sbjct: 128 IKEDFTKVFE-SVDFLLTPVSPSLPISVDEFTKLDNRTRTTLDDVCTVAVNLSGLPAVSF 186 Query: 449 PAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 P +L + +P+ LQLIG F E L S+ +E EA + Sbjct: 187 PVSLSPTRGLPISLQLIGPHFSESRLLSLAAKLEAEACF 225 >gi|300313659|ref|YP_003777751.1| amidase family protein [Herbaspirillum seropedicae SmR1] gi|300076444|gb|ADJ65843.1| amidase family protein [Herbaspirillum seropedicae SmR1] Length = 506 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 134/465 (28%), Positives = 221/465 (47%), Gaps = 38/465 (8%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E R + SK +S VEL+++ I IE+ N +NA ++AR A +++ +I+G Sbjct: 12 ELRQLIGSKQLSPVELLEACIARIEDINPHINAVTATCFERARGEARAAEQAVIDGKPLG 71 Query: 71 -LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PIGIKD T+G+ T S + G P ++ + +L GA++ GK N+ E Sbjct: 72 LLHGLPIGIKDLEETEGLLTTYGSPLYRGNIPARDNALVARLRAAGAIVAGKTNVPEMGA 131 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+++ + +G +P+ + GGSSGGS+AA+A L G+DTGGS+R PA+ Sbjct: 132 GANSRNAVWGATGNPFNPL-----LNAGGSSGGSAAALATDLLPLCSGSDTGGSLRIPAA 186 Query: 190 FTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG +P+ G S ++ + P + G + R V D+ + L+A G D + Sbjct: 187 KCGVVGFRPSPGLVPSERKLLGWTP-ISVVGPMGRDVADTVLQLRATLGLHASDPLGYAV 245 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 ++ + + +G Y D+ +D +Q +D A I P+ + Sbjct: 246 SDSEFASLPQVDLSQLRIG----YTEDFGVCDVDNGIRQ---VFRDKMAAIA----PYVK 294 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 P + A + +D +R V G D + S+G + + Sbjct: 295 LCEPVDVDMGEAHRA-----FDVIRAEAFVAGFDA-AYRRDPASLGPNTRANYEMGAAMS 348 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGS 425 +L D + ++ + R I R F + +E+ D+IL+PTTP S FP L +E N + Sbjct: 349 LL-----DCAWAQSEQTR--IFRRFQQLYER-YDLILSPTTPVSPFPWSELYLKEVNGVA 400 Query: 426 MGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 + + Y + T V +A PAIS+P + MP GLQ+ G PFR Sbjct: 401 LENYYRWLALTYVVTLATNPAISLPCGRDHRGMPFGLQVTG-PFR 444 >gi|302547476|ref|ZP_07299818.1| peptide amidase [Streptomyces hygroscopicus ATCC 53653] gi|302465094|gb|EFL28187.1| peptide amidase [Streptomyces himastatinicus ATCC 53653] Length = 461 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 142/475 (29%), Positives = 224/475 (47%), Gaps = 43/475 (9%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFAT 84 L +Y++ I + ++A + R AA SD R GD R L+GIP+ +KD T Sbjct: 11 LTTAYLRRITAIDPTIHAVLRTDPTALRQAAA-SDVRHRRGDVRGPLDGIPVLVKDNVNT 69 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVIS 143 +G+ T A S L G P ++ + +L D GAV+LGK N+ E+A + TS + V Sbjct: 70 RGMPTTAGSLALAGSPPDRDAALVARLRDAGAVILGKTNLSEWANFRAEKPTSGWSAVGG 129 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 + D+ P GSS GS AA+A L +IGT+T GSI PA G VG KP+ G Sbjct: 130 QTNNPYVLDR-NPCGSSSGSGAALAASLAQVAIGTETDGSIVCPAGMNGVVGHKPSLGLV 188 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 S+ G++ + D AG + R V D+A+ L AI DA +PD ER ++G Sbjct: 189 SQDGVVPISAEQDTAGPMARNVTDTALTLAAIG-----DAAH----LPD-ERTAPGGLRG 238 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 +G+ +RL L P +D + L+ AGA++VE++ P+ + + +E Sbjct: 239 KRIGL---WRLPSLGPEVDAVMTRTAEKLRSAGAEVVEVTPPYQERLAELEFPALLSEFH 295 Query: 324 SNLARYDGVRYGLR-VEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 ++ Y R G R + G + + R+ GQE+ R + + D Y Sbjct: 296 RDIDAYLATREGPRNLAGLVEFNRAHPAERTCFAGQELFERALA-----APPTTDPAYRA 350 Query: 382 AR-KIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVA 437 R +++ L +R E +D I +PT P P + G NDV + Sbjct: 351 MRAELKDLSRRSIDETMAAHRLDAIASPTNP----PAWTTDCARGD-----NDVIPSSTP 401 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +AG P++SVPA + ++P+G+ L+ + L ++G +E+ R H W Sbjct: 402 AAVAGYPSLSVPAGSVD-ELPVGVLLMAGDREDGRLLTLGAAVER-----RLHAW 450 >gi|296535885|ref|ZP_06898042.1| possible amidase [Roseomonas cervicalis ATCC 49957] gi|296263792|gb|EFH10260.1| possible amidase [Roseomonas cervicalis ATCC 49957] Length = 496 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 139/478 (29%), Positives = 217/478 (45%), Gaps = 46/478 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E ++ R + K +S VEL+DS ++ I + +NA + + AR AA++++ Sbjct: 1 MTEPCDLSAVTLRRLIGEKKLSPVELLDSCLKRIGEVDHAVNAMVAMDEGAARKAAQQAE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + ++ G+ L G+P+GIKD T G+ T S I P +ST+ L G ++L Sbjct: 61 QAVMQGEKLGPLHGLPLGIKDLDETAGLVTTFGSPIFKDHVPAKDSTMVADLRAAGGIIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF G++ + YG +P+ D T GSSGGS A+A + + G+D Sbjct: 121 GKTNTPEFGAGANTRNAVYGATGNPF---DPTRSAA--GSSGGSGVALACSMVPLASGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCS---RLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 TGGS+R PA+F G VG +P+ G RL S P L G + R V D A++L +A Sbjct: 176 TGGSLRNPAAFNGIVGFRPSPGMVPAERRLLGWSNLPVL---GPMARDVGDLALMLSVMA 232 Query: 237 GYDECDATCVNLPVPDYER--ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D LP D R A D++I D S + T G + ++ Sbjct: 233 ADHGVDPLAYTLPDCDVRRGMAFDEAI-------------DLSSLRVAATPDFGFAPTEN 279 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN---TR 351 I E+ Q P + + EA+ N D V LR + L +E R Sbjct: 280 ---HIREVFASRVQALSPLFGRVE--EATPNCEGTDEVFAILRA--LNFLAAHEEKVRKR 332 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G V+ + G L D RA +T I R++ + F +G DV+++P Sbjct: 333 PQDVGPNVRANVEEG---LGYSAND--VARASVQQTKIYRNWQDFFARGYDVVISPAITL 387 Query: 412 SAFPLGK----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 S P + E + + + + AV + G PAIS+P + + +P GLQ++G Sbjct: 388 SPRPWAELYPAEIDGKPTKNYFHWLALAYAVTVPGHPAISLPLGVDKAGLPFGLQIVG 445 >gi|134100308|ref|YP_001105969.1| putative amidase [Saccharopolyspora erythraea NRRL 2338] gi|291008792|ref|ZP_06566765.1| putative amidase [Saccharopolyspora erythraea NRRL 2338] gi|133912931|emb|CAM03044.1| amidase [Saccharopolyspora erythraea NRRL 2338] Length = 467 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 127/489 (25%), Positives = 220/489 (44%), Gaps = 36/489 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E D ++S VE ++ ++ I+ ++ +NA+ V A +A A S++R G Sbjct: 11 LTATEMLDSYAGGELSPVEATEATLRRIDEADGAVNAFCLVDADRALEQARASERRWQRG 70 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY--ESTVTQKLWDNGAVMLGKLN 123 + L+G+P +KD F T+ T S +D + H+ ++ +L ++ AV +GK Sbjct: 71 EPVGRLDGVPTSVKDIFLTRDWPTLRGSRTVDPDQ-HWSVDAPTVARLREHNAVFVGKTT 129 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E A + + G +PW + TPGGSSGG++AAVA + +IGTD GGS Sbjct: 130 TPELAWKGVTDNTLNGITRNPWATTR-----TPGGSSGGAAAAVALGMAPLAIGTDGGGS 184 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PASF G IKPTYGR + ++ AG +T TV ++A+++ ++ D D Sbjct: 185 VRIPASFCGIFTIKPTYGRVPHYPASPYG-TMAHAGPMTTTVAETALMMDVLSEPDSRDW 243 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + + + LD ++G+ + + + P I K+ D GA IVE + Sbjct: 244 SALQPMTTSFLDGLDDGVRGLRIALSPGLGFATVDPEIAKSVSAAAKVFTDLGA-IVEDA 302 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P + ++++ + A+ ++ L E +++L+ H I Sbjct: 303 DPGITDPVEDFHVLWFSGAAKSVEH-------LTAEQRELLD------------PGLHEI 343 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + S++ YL A R L+ + AF D++LT T P F G E Sbjct: 344 VSQGLTYSAQ----DYLEATNTRMLLGQRMG-AFHDTYDLLLTATVPIPPFEAGVEVPPG 398 Query: 424 GSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T NM PA SVP + +P+GLQ++G + + + E+ Sbjct: 399 WPQPRWTSWTPLTYPFNMTQQPAASVPCGFTAEGLPIGLQIVGPRHSDARVLRAARAFEQ 458 Query: 483 EAGYFRPHK 491 + RP + Sbjct: 459 ARPWSRPAR 467 >gi|310641111|ref|YP_003945869.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit a (glutamyl-tRNA(gln) amidotransferase, subunit a) [Paenibacillus polymyxa SC2] gi|309246061|gb|ADO55628.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Paenibacillus polymyxa SC2] Length = 490 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 166/314 (52%), Gaps = 21/314 (6%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + E ++ +R ++++ ELV Y+ I + S +N+ +E+ A +R Sbjct: 15 VTIFELQEAMRKGEVTSRELVMYYMYRIATHDQSGQNINSIMEINPDAIFIAEALDKERK 74 Query: 64 INGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +K+ TK + T A + L+ ++ + +KL + GA++LGK Sbjct: 75 TRGIRGYLHGIPVLLKENIETKDKMRTSAGALALENNISETDAFLVKKLREAGAIILGKT 134 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A G S++ +S G V++P+ F GGSS GS+ AVA + ++G Sbjct: 135 NMTELANGVSSKVCAGYSSKGGQVLNPY------GDFFVGGSSTGSAVAVASNFTSVAVG 188 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII ++ S D AG + RTV D++ILL +AG Sbjct: 189 TETSASILSPAIQNSIVGIKPTVGLISRTGIIPYSYSQDTAGAMARTVSDASILLSVLAG 248 Query: 238 YDECD-ATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLD-YLSP-TIDKT-WQQGISWL 292 D+ D AT N DY LD++ ++G +G+ ++ L+ + P DK + + L Sbjct: 249 KDDDDPATWKNDDTIDYSTYLDKNGLEGAKIGVYRDVPLEQFRDPDEYDKILFNNTVEEL 308 Query: 293 KDAGAKIVE-ISLP 305 AGA ++E I +P Sbjct: 309 TKAGAIVIEDIEMP 322 >gi|145237662|ref|XP_001391478.1| amidase [Aspergillus niger CBS 513.88] gi|134075952|emb|CAK48146.1| unnamed protein product [Aspergillus niger] Length = 529 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 128/449 (28%), Positives = 200/449 (44%), Gaps = 45/449 (10%) Query: 61 KRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 K +I G+ L G I +KDC A G+ S I+ + P ++TV ++ D GA + Sbjct: 89 KFLIKGNPEGGLLTGKTISVKDCIAVAGVPQLLGSDIIPSWTPITDATVVTRVLDAGADI 148 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 G + + +++ TS G V +P+ + ++ GGS+ G +A VA L ++G Sbjct: 149 HGTSTCENYCHSTASFTSAQGTVENPFAT-----GYSAGGSTSGGAALVAAGLVDITLGG 203 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P++F G VG+KPTYG GI S D G + R V D A L AIAGY Sbjct: 204 DQGGSIRVPSAFCGCVGLKPTYGLVPFSGIASGDAIDDHTGPLARNVIDVASCLDAIAGY 263 Query: 239 DECDATCVNLP---VPDYERALDQS---IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISW 291 D D C+ P + ++L + G +G+ KE + + P + ++ Sbjct: 264 DGIDDRCLGSPKHGSTSFAKSLQADATRLDGFKIGVLKEGFEHTAVDPAVKESVMAATQK 323 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + E+SLP Y PA + I S +L + G+ L M E R Sbjct: 324 FAELGATVEEVSLP-DHYHGPAIWTIQ-QRVSGSLTLLG------QAHGRRGLYMTEMER 375 Query: 352 SI------GFGQ---EVKHRIMIGTYVLSSR---CYDSHYLRARKIRTLIKRDFTEAFEQ 399 GF + K+ I+ G Y L+SR Y R++R L + D + ++ Sbjct: 376 ERLPWTKEGFQRAFPATKNVIINGLY-LTSRFPDLYGKSVNIGRRLRDLYE-DLLQEYDV 433 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC------ 453 V P E+ SMG N T ++ G PA+S+P Sbjct: 434 VVMPTTPVVAPRHGARGLPVESLKPSMGLTIN---TAIFDVTGHPAMSIPVGYAPAKDDP 490 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + K+P+G+Q++G ++E + G EK Sbjct: 491 QVKLPVGMQIVGGLWQEFKVLKAGYAWEK 519 >gi|229079265|ref|ZP_04211811.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock4-2] gi|228704049|gb|EEL56489.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock4-2] Length = 491 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 140/504 (27%), Positives = 226/504 (44%), Gaps = 64/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + + + ++ + S +++ ELV Y+ I + + ++N+ +E+ A +R Sbjct: 13 LTIQDIQNEMESGKLTSKELVMYYLYRIAKYDQNGPKINSILEINPDAIFIAEALDYERK 72 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD T +HT A + L+ ++ + +L + GAV++GK Sbjct: 73 TKGIRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTQLREAGAVIIGKT 132 Query: 123 NMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 NM E A S E ++ G I+P+ + D GGSS GS+ AVA S+G Sbjct: 133 NMTELANAMSFEMWAGYSARGGQTINPYGT--GKDPMFVGGSSTGSAIAVAANFTVVSVG 190 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T SI PA VGIKPT G SR GII F S D AG RTV D++ILL ++ G Sbjct: 191 TETDASILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDASILLGSLIG 250 Query: 238 YDECDATC---VNLPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQG 288 DE D DY + LD + G +G+ PK+Y Y + D+ +++ Sbjct: 251 VDEKDVATHRSEGRAEHDYTKYLDVNGLNGAKIGVFNAAPKDY---YENGEYDEILFKET 307 Query: 289 ISWLKDAGAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARY-DGVRYGLRVEG-K 341 I L++ GA +VE I +P H +++ +P Y E +L Y + + V Sbjct: 308 IQVLRNEGATVVENIDIPSFHRKWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSIS 361 Query: 342 DILEMYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +++E +N R++ +GQ + G + + YL AR D + EQ Sbjct: 362 ELMEFNKNIAERALKYGQTK----LEGRKDFPNTLRNPEYLNAR------LEDIYFSQEQ 411 Query: 400 GVDVILTPTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 G+D L + FP + + + AG P+I++PA E P Sbjct: 412 GIDFALEKYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRP 456 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 G+ + F E L + E+ Sbjct: 457 FGITIASTAFSEGILIKLAYAFEQ 480 >gi|134279084|ref|ZP_01765797.1| amidase family protein [Burkholderia pseudomallei 305] gi|134249503|gb|EBA49584.1| amidase family protein [Burkholderia pseudomallei 305] Length = 484 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 139/484 (28%), Positives = 217/484 (44%), Gaps = 40/484 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKER 468 Query: 485 GYFR 488 + R Sbjct: 469 DWVR 472 >gi|330965845|gb|EGH66105.1| amidase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 495 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 137/478 (28%), Positives = 207/478 (43%), Gaps = 38/478 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R ++ + L + + I+ N +NA+ +V A+ A A + G R L GI Sbjct: 39 VRKGCMTPIRLTELCLSIIKTHNPTLNAFGDVYAEAALEQAWTMTAELQRGMPRVPLHGI 98 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P GIKD F+T G+ T S P ++ + ++L GA++LGK EF ++ Sbjct: 99 PFGIKDLFSTAGLRTTRGSLTALDAVPAQDAPIIRRLKSAGAIILGKTATTEFGWTGAST 158 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW D T T GGSS GS+ AVA + A++G+D GGS+R P SF G Sbjct: 159 SRVFGNGRNPW---DPT--LTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIPGSFCGAF 213 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 +K T GR S L AG ITRTVRDSA+L ++G D D LP PD E Sbjct: 214 ALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLSGPDPLDHQA--LPAPD-E 269 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L + Q + K R+ + D I+ +A + SLP T L Sbjct: 270 SFLARCDQPL-----KPLRIGFCPTLFDTPVDPQIAAAVEAAVATIARSLPVTVSTLTLD 324 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + A + G+ YG LE + GF + ++ G Sbjct: 325 WQDPLATFETLWVAGRGIAYG------KALEQQLDQLDPGFAELIRRSANYGL------- 371 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEENNSGSMGH 428 YL+A + R FE D+++ PT P F P G +S ++ Sbjct: 372 --GDYLQAMQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAGQDS-ALPW 427 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT N+AG PA ++P + +P+GLQ++G F + + +E A + Sbjct: 428 ARWTPFTYPFNIAGNPAANLPCGWSAEGLPIGLQVVGPRFADAHVLQFCAAVEAIAPW 485 >gi|254517301|ref|ZP_05129358.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR5-3] gi|219674139|gb|EED30508.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR5-3] Length = 531 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 138/502 (27%), Positives = 224/502 (44%), Gaps = 58/502 (11%) Query: 16 LRSKDISAVELVDSYIQAI--ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLE 72 LRS ++S V++V Y++ I + ++ +NA I A A D R+ G+ L Sbjct: 52 LRSGEMSCVDIVKGYLRRIVRYDQSAGLNAVI-FTNSAALEKAASIDARLAAGETLGSLY 110 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ +KD F T + T S L P ++ + ++L A+++ K NM E+A Sbjct: 111 CVPVLLKDNFDTHDMPTSGGSSALKTSVPPDDAFMVKQLRAADAIVIAKTNMAEWAFSPK 170 Query: 133 NE-TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +S YG + + + D+ P GSSGG+++A A +GTDTG SIR P+S Sbjct: 171 QTVSSSYGTTANAY----ALDR-VPAGSSGGTASATAASFGVVGMGTDTGNSIRGPSSHL 225 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVNL 248 GI+ T G SR G+I A D AG +TRTV+D+A + +AG+D D A Sbjct: 226 ALFGIRSTLGLTSRDGVIPLALDRDIAGPMTRTVKDAARVFNVVAGFDPADSFTALGKGR 285 Query: 249 PVPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLP 305 DY L+ Q+++G +G+ + D P + +++ ++ L GA IV+ ++ Sbjct: 286 REDDYTTFLNPQALRGKRIGVLRALVDTDDADPAVIAVFEEALTDLVAQGAVIVDPFNVA 345 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + + L Y AR+ RY + V LE +T I EV+ Sbjct: 346 NLENHLEGDYFC---------ARF---RYDMHV----YLESLGDTAPIKDVMEVRRSGEY 389 Query: 366 GTYVLSSRCYDSHY---LRARKI------------RTLIKRDFTEAFEQG-VDVILTP-- 407 Y+ Y + Y + K+ R D + ++ VDVI+ P Sbjct: 390 SPYIEGRLDYFAKYPADVSPAKLDPPCPEFPDHPGRQAYLDDVLASMDKAQVDVIVYPSW 449 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T P + +E D + GLPA+SVP +P GLQ++G+P Sbjct: 450 TNPPARLAHAVKE--------YLGDNSQLVAPATGLPAVSVPMGYSYGGLPAGLQILGRP 501 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 + E LFS+ E+ + +P Sbjct: 502 YSEGLLFSLAYAYEQATQHRKP 523 >gi|311744976|ref|ZP_07718761.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Algoriphagus sp. PR1] gi|311302314|gb|EAZ81703.2| glutamyl-tRNA(Gln) amidotransferase subunit A [Algoriphagus sp. PR1] Length = 553 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 124/489 (25%), Positives = 229/489 (46%), Gaps = 62/489 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S++ ++ V + ++SK IS+ L Y+ I+ + + I ++ +A + A++ D+ Sbjct: 113 SDIAYLPVHQLAVLIKSKKISSERLTKIYLDRIKTYSDTLQCLITLMETEALSKAKQMDE 172 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +G+ R L GIP GIKD A KG T + + V QKL D GAV++G Sbjct: 173 ELASGNYRGPLHGIPYGIKDLLAVKGTKTTWGAMPYKDQEIDKTAAVVQKLNDAGAVLVG 232 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + AMG + Y G +PW +++ + GS+ SA + F ++GT+T Sbjct: 233 KFTLGALAMG---DVWYGGVTKNPW-NLEQGSSGSSAGSASAVSAGLVPF----ALGTET 284 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI P++ G G++PTYGR S+ G ++ + S+D+ G I+R+ D I+L + G D Sbjct: 285 LGSIVSPSTRNGVTGLRPTYGRVSKDGAMALSWSMDKIGPISRSALDDGIILSVLNGADI 344 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DA+ + +++ ++ S++ + VG K Y + + + + + LK+ G ++ Sbjct: 345 NDASTIEAAF-NFDASM--SVKDLKVGYFKPY---FEGERVQENDKAVLELLKNQGIELH 398 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV- 359 + L + A P + L VEG + E TR+ G+ ++ Sbjct: 399 PLELKTSIQAGPIVMM-------------------LMVEGASAFD--ELTRA-GWDDQLV 436 Query: 360 -KHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 +H+ ++R + Y++ + RTL+ ++ E ++ DVI+TP+ Sbjct: 437 AQHKNAWPNLFRAARFIPAVEYVQLSRQRTLLIQEMHELMKE-YDVIVTPSF-------- 487 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +G I N+ G PA+ +P ++ P + L+ F EE L +G Sbjct: 488 -----AGPQLQI--------TNLTGHPALCLPNGFNDRNSPTSITLLANLFEEEKLVMLG 534 Query: 478 QIIEKEAGY 486 I+K + + Sbjct: 535 DFIQKNSDW 543 >gi|311103755|ref|YP_003976608.1| indoleacetamide hydrolase 1 [Achromobacter xylosoxidans A8] gi|310758444|gb|ADP13893.1| indoleacetamide hydrolase 1 [Achromobacter xylosoxidans A8] Length = 491 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 133/494 (26%), Positives = 229/494 (46%), Gaps = 38/494 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV--VAQKARAAAEESDKRII 64 + V+E+ +R +++V L + + I+ + + +NA+I V A+A A ++ Sbjct: 17 LTVTEAAALIRQGRLTSVALTQACLDRID-ARADLNAFITVDRAGALAQARARDAAGGQA 75 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 +G A L G+PI IKD G+ A + L FRP ++ V ++L + GAV++GK NM Sbjct: 76 DGTALPLAGVPIAIKDNIHVAGLPNTAGTPALKHFRPAEDAPVVRRLREAGAVIVGKTNM 135 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E A G S + + P + ++ D GGSS GS AAV L A++GTDTG S Sbjct: 136 HELAFGVSGYNTAF-PGTHGEGTRNAYDASLIAGGSSSGSGAAVGARLTPAALGTDTGAS 194 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA+ G VG +P+ GR GI + + D G I ++ D +LL A+ D Sbjct: 195 VRLPAAVNGAVGFRPSVGRYDGAGITPISHTRDTPGPIANSM-DDIVLLDAVLAGD---- 249 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P AL + GM +G+ Y L P + ++ L+ AG ++VE+ Sbjct: 250 -------PQPLSALPPA--GMRLGL-CGYFWQGLDPQVQAVMDAALTKLRAAGVQLVELD 299 Query: 304 LP-----HTQYALPAYYIISPAEASSNLARYD-GVRYG---LRVEGKDILEMYENTRSIG 354 +P + +P + + L RY+ GV + ++ D+ +++ G Sbjct: 300 MPGLEASNAAVGMPVCLHEQKGDLTDYLERYETGVTFEQVVAQISSPDVKGIFDGLIVPG 359 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + ++ L R +H ++ + +R F + +D +L PT P Sbjct: 360 V-LPLPSGEVLPLQPLYERAMATHR---DELINVYRRAFQ---DHALDGLLFPTVPIQPM 412 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + ++ S G + +V + AGLP +SVPA L +P+GL++ G P + + Sbjct: 413 AATPDASSFESFGRLARNVDP--GSNAGLPGLSVPAGLSADGLPVGLEVDGLPGEDRKVL 470 Query: 475 SVGQIIEKEAGYFR 488 +VG ++E G + Sbjct: 471 AVGLMLENVLGRLQ 484 >gi|119385781|ref|YP_916836.1| amidase [Paracoccus denitrificans PD1222] gi|119376376|gb|ABL71140.1| Amidase [Paracoccus denitrificans PD1222] Length = 473 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 138/502 (27%), Positives = 236/502 (47%), Gaps = 53/502 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + ++E +LRS + +A ++ I+ + +NA++ V A A D Sbjct: 1 MSALKPVTMTEQLRQLRSGETTAEAMMTRAIRRAGDLG-HLNAFLTVEPDLALQQARAVD 59 Query: 61 K-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + R L G+PIG+KD +G T + L R + V QKL + AV+L Sbjct: 60 RARTEGAQMPILAGLPIGVKDNIDVEGWVTSGATPALAQLRAKATAPVLQKLLQSQAVLL 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ E A G +N P + R+ + + GGSSGG++AA+A + +A +GTD Sbjct: 120 GKTNLHELAFGVTNTNFTPIPAV---RNPHDPARIS-GGSSGGTAAAIAAGIVSAGLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYG------RCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 T GS+R PA+ G G++P+ G R S G++ + + D G + +V D A+L Sbjct: 176 TSGSVRIPAALCGIAGLRPSVGAGGTERRYSSQGVLPISHTNDTPGPMAVSVEDLALLDA 235 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 I G D A +S++G+ +G+P + +D L P +++ ++ L Sbjct: 236 VITGTDPVTA---------------KSLKGVRLGVPDCFWID-LDPDVERVCRELCGKLA 279 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 AGA++V +SLP + + +S A + R D + L G+ + + + R I Sbjct: 280 KAGAELVSVSLPRLRD---VWRQVS-APVVLHEPRED-IPVWLAANGRSDISIMDIFRQI 334 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAFEQ-GVDVILTPTTPT 411 V + V++S D +Y A + R + R + AF++ G+ ++ PT P Sbjct: 335 -----VNPDVRAAFEVVTSESSDKNYRDAIQNYRPELCRIYDGAFQKNGLAALIFPTVPI 389 Query: 412 --------SAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGL 461 SAF GK + N G I++ + T AGLP +S+P + +P+G+ Sbjct: 390 PATYIDIESAF--GKVKIN-GEDREIFDTLVRNTDPGANAGLPGLSIPVGWTQSGLPVGI 446 Query: 462 QLIGQPFREETLFSVGQIIEKE 483 ++ G + + +G IE+E Sbjct: 447 EIDGPVGSDRDVLGIGVSIERE 468 >gi|330876306|gb|EGH10455.1| amidase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 507 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 136/489 (27%), Positives = 227/489 (46%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K +S VEL+D+ I+ IE+ N ++NA+ ++AR A ++K Sbjct: 5 SELLGKSATELRSLIGNKQLSPVELLDACIERIESLNPKINAFAATCFERARNEAVIAEK 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+M+G Sbjct: 65 AVLQGKPLGVLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIMVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLA 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + + R +D S + VG +++ + I +++ IS LK Sbjct: 239 QSDPLSYAIADDAFAPRTVDLS--QLRVGYSEDFGTCAVDTHIRAVFREKISALKPLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L T A + ++ R + L+ +D + NTR+ Sbjct: 297 CDAIDLNLTS-----------AHRTFDVLRAEAFVAALQDAHDRDPDALGPNTRA----- 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +G + C +H ++R + R F + FE D+IL PTTP S FP Sbjct: 341 ----NFEMGAAMSLQDCVKAHGEQSR-----LFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + + + PA+S+P + MP GLQ+IG + L Sbjct: 391 ELYLREVNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHQGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + +E+ Sbjct: 451 LACAEALEQ 459 >gi|284990597|ref|YP_003409151.1| amidase [Geodermatophilus obscurus DSM 43160] gi|284063842|gb|ADB74780.1| Amidase [Geodermatophilus obscurus DSM 43160] Length = 499 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 132/504 (26%), Positives = 235/504 (46%), Gaps = 54/504 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++ ++ +E R+R +++S +LVD+ IE N +NA++ + AR AA E++K Sbjct: 5 ADFAYVGATELARRVRHREVSPTDLVDACAARIEERNPSLNAFVFTDVEGARQAAREAEK 64 Query: 62 RIING-DARDLEGIPIGIKDCF-------ATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 +++G + L G+P IKD F AT G LD + +++ Sbjct: 65 ALVDGSEIGPLHGVPTAIKDLFDFKPGWPATFGGVRALADFSLDAY-----CIFAERVEK 119 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA+++GK N + + +G +P+ + PGGSSGGS+AAVA L Sbjct: 120 AGAIIVGKTNSPVMGYRGTCDNPLFGATANPFDT-----SRNPGGSSGGSAAAVADGLVP 174 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL----GIISFAPSLDQAGIITRTVRDSA 229 + GTD GGSIR PA++ G G K ++GR + S P L + G +TRTV D+A Sbjct: 175 FAEGTDGGGSIRIPAAWCGLYGYKASFGRVPSVVRPNAFGSTMPFLFE-GPLTRTVEDAA 233 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 ++L ++GY D ++ D+ R + + I GM + ++ + + I +T Q + Sbjct: 234 LVLDVLSGYHPGDMFSIDGQPHDFTRDVRRDISGMRIAYTPDFGIFPVDRRIRETVGQAV 293 Query: 290 SWLKDAGAKI--VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 +DAGA + ++++LP+ Q L + + G ++ G D+L + Sbjct: 294 QAFRDAGAVVEQIDLTLPYGQRELSDLW------CRQIMLVNVGAFENMKKNGLDLLGEH 347 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + G+ + H Y +S + Y+ +R+ + D +A D+++TP Sbjct: 348 RDNFPDGYLRWADH-----VYGMSISELNEDYV----MRSAVY-DTIQAVYADFDLLVTP 397 Query: 408 TTPTSAFPLGKEENNSGSMGH-----IYNDVF-----TVAVNMAGLPAISVPAALCEKKM 457 T SA P+ E ++G + D + T N G PA S+PA L + + Sbjct: 398 T--LSAMPVLNSEVPGTTVGPSEVEGVEVDPYIGWCPTYLTNFTGHPAASIPAGLVD-GL 454 Query: 458 PLGLQLIGQPFREETLFSVGQIIE 481 P+G+Q+ G+ + + + + E Sbjct: 455 PVGMQIQGRRYADSDVLAASGTFE 478 >gi|254183369|ref|ZP_04889961.1| amidase family protein [Burkholderia pseudomallei 1655] gi|184213902|gb|EDU10945.1| amidase family protein [Burkholderia pseudomallei 1655] Length = 484 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 139/479 (29%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A E D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAEKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMARTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 467 >gi|188992825|ref|YP_001904835.1| amidase [Xanthomonas campestris pv. campestris str. B100] gi|167734585|emb|CAP52795.1| Putative secreted peptide amidase [Xanthomonas campestris pv. campestris] Length = 542 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 149/486 (30%), Positives = 219/486 (45%), Gaps = 35/486 (7%) Query: 15 RLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 R+++ S V+L +Y+Q I + + +NA IE+ Q AA +R L Sbjct: 49 RMQAGQSSCVQLTHAYLQRIARIDRAGPSLNAVIELNPQAEADAAALDAERRAGQVRGPL 108 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ +KD + A S L FRP ++ + Q+L GAV+LGK N+ E+A Sbjct: 109 HGIPLLLKDNIDALPMVNSAGSLALASFRPTQDAFLVQRLRAAGAVILGKTNLSEWANFR 168 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S ++S P GSS G+ AA+AG L A IGT+T GSI PA+ Sbjct: 169 STQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAGSLATAGIGTETDGSITCPAAVN 228 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 G VG+KPT G SR GII + S D AG +TRTV D+A +L+AIA D D P Sbjct: 229 GLVGLKPTVGLVSRDGIIPISASQDTAGPMTRTVADAAAVLQAIAAPDPQDPATRTAPPS 288 Query: 250 VPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P+Y L ++G +G+ + R D P I + + L+ AGA ++E L Sbjct: 289 TPNYLAHLKPDGLRGARLGLLRNPLRED---PAIAAALDRAVQTLRAAGATVIETRLATD 345 Query: 308 QYALPAYYIISPAEASSNLARYDGVR-YGLRVEGKDILEMYENTRSIG----FGQEVKHR 362 A + E + L Y +R + V+ D L + + FGQE+ + Sbjct: 346 GQWDAAEQTVLLVEFKAGLNAY--LRSHAAPVKDLDALVAFNRANAQREMPYFGQELFEQ 403 Query: 363 IMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQG--VDVILTPTT-PTSAFPLGK 418 + D YL AR R L +A + +D ++ PTT P LGK Sbjct: 404 AQAAPGL-----EDPAYLSARASARRLAGEQGIDAALKADRLDALIVPTTGPAWVTTLGK 458 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 G + A +AG P++SVP + +PLGL +G + E L +G Sbjct: 459 --------GDTFPGAGYGAAAVAGYPSLSVPMGQTQ-GLPLGLLFMGAAWSEPRLIELGY 509 Query: 479 IIEKEA 484 E+ + Sbjct: 510 AYEQRS 515 >gi|70730898|ref|YP_260639.1| putative amidase [Pseudomonas fluorescens Pf-5] gi|68345197|gb|AAY92803.1| amidase family protein [Pseudomonas fluorescens Pf-5] Length = 479 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 134/481 (27%), Positives = 219/481 (45%), Gaps = 39/481 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+ E R K +S VE+ + IE N ++NA+ + A A E++KR + G Sbjct: 10 MSAIELLGHYRDKQLSPVEVTQDALARIERFNPRVNAFCYTDPEGALNTAREAEKRWMKG 69 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 L+G+P IK+ T+G+ ++ S + P ++ VT + + GAV+LGK Sbjct: 70 QPCGALDGLPTSIKELTPTRGMPSRKASLTIGAQGPWDVDAPVTTFMREAGAVVLGKTTS 129 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF ++ YG +PW + + T GGSSGG++ A A L G+D GGSI Sbjct: 130 PEFGWKGVTDSPLYGITRNPWDT-----RMTCGGSSGGAAVAAALNLGVLHQGSDAGGSI 184 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PASFTGT G KPT+G + S + G +TRTV D+ +LL+AIA D DA Sbjct: 185 RIPASFTGTFGFKPTFGYIPQYP-ASATTLVSHLGPMTRTVEDAVLLLQAIARPDPRDAL 243 Query: 245 CVNLPVPDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + P + L S + G+ + ++ + P + + Q ++ L+ GA IVE Sbjct: 244 ---MGAPRHTPWLPDSTHLNGLRIAYSADFGYVQVDPQVARQVAQAVARLEQLGA-IVEA 299 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P L + + A A + LAR L K +L + + F +E +H Sbjct: 300 VDPGFDDPLQLFKSVIYAGAQT-LARQ------LSTAQKAML----DPGLLRFTEECRHT 348 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + + + A++ R + F D+++ P P +AF G + Sbjct: 349 TL------------ADFTAAQEARAALMAHM-NMFHSRYDLLVCPMLPITAFEAGHDTPP 395 Query: 423 SGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ F+ N+ PA S+P E +P+GLQ++G F ++ + V + E Sbjct: 396 GSAIDDWMKWSPFSYPFNLTQQPAASLPCGFSEAGLPIGLQVVGARFADDQVLRVCRAYE 455 Query: 482 K 482 + Sbjct: 456 R 456 >gi|282863354|ref|ZP_06272413.1| Amidase [Streptomyces sp. ACTE] gi|282561689|gb|EFB67232.1| Amidase [Streptomyces sp. ACTE] Length = 489 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 144/507 (28%), Positives = 219/507 (43%), Gaps = 49/507 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E NF+ E LR+ ++++ EL D I IE + +NA +ARAAA ++D+ Sbjct: 2 EWNFLTAEELVGSLRAGEVTSAELTDEAIARIERDDKAVNAICVPDFDRARAAARDADEA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ R L GIP+ +K+ + G+ T P ++ +L + GAV+LGK Sbjct: 62 RARGEDRPLLGIPVTVKESYNVAGLPTNWGMEPHRDHMPAEDAVQVSRLKEAGAVVLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ + YG +PW T GGSSGGS+AA+A A SIG+D G Sbjct: 122 NVPVGLQDVQSFNKIYGTTNNPW-----DHGRTSGGSSGGSAAALASGFGALSIGSDIAG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-------SFAPSLDQAGIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G++ P L G + R+ RD +LL + Sbjct: 177 SLRTPAHFCGVYAHKPTLGLAAGRGMVPPLAPAWPTEPDLAVVGPMARSARDLTLLLDVM 236 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D A V LP +ER D + + L PT + G+ + Sbjct: 237 AGPDPLTFGVAHQVTLPPARHERLRDFRVLLVDT--------HPLIPTASAV-RAGVDRV 287 Query: 293 KDA---GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 DA G VE P + A + + SS++AR+ +E YE Sbjct: 288 ADALVDGGARVERHSPLLPDLVEAATVYTQLLFSSSVARFP-------------VETYEQ 334 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 R G V R + + S ++ A R L + + F + D ++ P T Sbjct: 335 LRIRAAGLGVDDRSLDAVRLRSMVSSHHDWMEANGRRELHRHGWRRLFVE-FDAVVCPVT 393 Query: 410 PTSAFPLGKEEN--------NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 PT AFP + + + V+ M GLPA +VPA + +P+G+ Sbjct: 394 PTPAFPHDHLPDPRERRIDIDGAEYPYFDQLVWAGLATMPGLPATAVPAGRSPEGLPVGV 453 Query: 462 QLIGQPFREETLFSVGQIIEKEAGYFR 488 Q+IG F + T + +++E+E G FR Sbjct: 454 QIIGPMFEDRTPLRLAELLEQEIGGFR 480 >gi|290954975|ref|YP_003486157.1| amidase [Streptomyces scabiei 87.22] gi|260644501|emb|CBG67586.1| putative amidase [Streptomyces scabiei 87.22] Length = 476 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 155/503 (30%), Positives = 229/503 (45%), Gaps = 61/503 (12%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F + D +R+K++S VE+ ++Y+ IE N +NA + + RAAA +++ ++ Sbjct: 6 FSTAQQIADLIRTKEVSPVEVAETYLDRIERINPAVNAVVWLDTDAVRAAAVRAERAVLR 65 Query: 66 GDAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 GD L G+P+ IKD + G +T + I D + + V Q L D GA+ LG+ N Sbjct: 66 GDRLGPLHGVPVPIKDLSSVAGQPNTMSSLAIRDTPQTVTDPDV-QLLLDAGAIPLGRTN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF + +E + +G +PW T GGSSGG+SAAVA L + D GGS Sbjct: 125 SPEFGALTVSENARHGKTRNPWNP-----AHTSGGSSGGASAAVAAGLAPVAHAGDGGGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PAS TG VG+KP+ GR L + + S + G ITRTVRD+A++L + D Sbjct: 180 IRVPASVTGLVGLKPSRGRVPAL-VRGWEHSTTE-GAITRTVRDAALMLDVMGRPDRLAW 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPT---IDK----TWQQGISWLKD 294 PD R + I P R+ L +PT +D+ L+D Sbjct: 238 YS----APDPGRPYIEEIGAD----PGRLRIGLLLDAPTGLPVDEECRTAALTAAQALRD 289 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G +VE Y + + AS+ Y + V+ D ++ Y R Sbjct: 290 LGHDVVEARPRMFSYEAIMGFTWTIISAST---------YAIEVDDPDAVDPYIRRR--- 337 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 +E + G Y ++ + RD + DV+LTPTT A Sbjct: 338 --RETALEVSAGDYARTAARLQAE-----------SRDVVAQWGTDFDVLLTPTTAVVAP 384 Query: 415 PLGK--EENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P+G +E NS G + FT VN+AGLPAIS+P +P+G QLIG P+ Sbjct: 385 PVGPVYDEANSDPDGPRATETRMVSFTAFVNIAGLPAISLPVHTTADGLPVGAQLIGAPY 444 Query: 469 REETLFSVGQIIEKEAGYFRPHK 491 E TL + +E FR H+ Sbjct: 445 DEATLLRLSAQLEPR---FRWHE 464 >gi|213971291|ref|ZP_03399407.1| amidase family protein [Pseudomonas syringae pv. tomato T1] gi|301385061|ref|ZP_07233479.1| amidase family protein [Pseudomonas syringae pv. tomato Max13] gi|302059140|ref|ZP_07250681.1| amidase family protein [Pseudomonas syringae pv. tomato K40] gi|302131444|ref|ZP_07257434.1| amidase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923936|gb|EEB57515.1| amidase family protein [Pseudomonas syringae pv. tomato T1] Length = 507 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 136/489 (27%), Positives = 226/489 (46%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E + +K IS VEL+D+ I+ IE+ N ++NA+ ++AR A ++ Sbjct: 5 SELLGKSATELLALIGNKQISPVELLDACIERIESLNPKINAFAATCFERARDEALLAEH 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+M+G Sbjct: 65 AVLQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIMVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGVVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLA 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + + R +D S + VG +++ + I +++ IS LK Sbjct: 239 QSDPLSYAIADDQFAPRTVDLS--QLRVGYSEDFGTCAVDTAIRAVFREKISALKPLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L T A + ++ R + GL+ +D + NTR+ Sbjct: 297 CDAIDLNLTS-----------AHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA----- 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +G + C +H ++R + R F + FE D+IL PTTP S FP Sbjct: 341 ----NFEMGAAMSLQDCVKAHGEQSR-----LFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + + + PA+S+P + MP GLQ+IG + L Sbjct: 391 ELYLREVNGVQLDNYYRWLALCYTITLTTNPALSLPCGTDHQGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + +E+ Sbjct: 451 LACAETLEQ 459 >gi|330986079|gb|EGH84182.1| amidase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 507 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 135/489 (27%), Positives = 228/489 (46%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K IS VEL+D+ I+ IE+ N ++NA+ ++AR A ++ Sbjct: 5 SELLDKSATELRALIGNKQISPVELLDACIERIESLNPKINAFAATCFKRARDEALLAEH 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+++G Sbjct: 65 AVLQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIVVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLG 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + ++ R +D S + VG +++ + TI +++ I+ L+ Sbjct: 239 QSDPLSYAIADDEFAPRTVDLS--QLRVGYSEDFGACAVDDTIRAVFREKINALRPLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L + A + ++ R + GL+ +D + NTR+ Sbjct: 297 CEAIDL-----------NLGSAHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA----- 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +G + C +H ++R I R F + FE D+IL PTTP S FP Sbjct: 341 ----NFEMGAAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + + + PA+S+P MP GLQ+IG + L Sbjct: 391 ELYLREVNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + +E+ Sbjct: 451 LACAEALEQ 459 >gi|33595112|ref|NP_882755.1| putative amidase [Bordetella parapertussis 12822] gi|33565189|emb|CAE35987.1| putative amidase [Bordetella parapertussis] Length = 490 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 137/487 (28%), Positives = 224/487 (45%), Gaps = 37/487 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL F +++E L + SAVEL Y+ I +N ++AY+ V A A+ +D Sbjct: 19 MSELAFSSLAELARGLEAGRYSAVELARHYLARIARANEALHAYVSVDEAGALRLAQAAD 78 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G A L+G+PI IKD +G T A S R T ++L G V+L Sbjct: 79 ARRAAGYALGPLDGLPIAIKDLCEIEGQVTTAGSAAWRERRSKVTGTAVRRLLAAGMVVL 138 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M EFA G G +PW D + PGGSS GS AVA L A++G+D Sbjct: 139 GKTHMVEFAFGGWGTNPVMGTPRNPW---DLSHPRIPGGSSSGSGVAVAAGLAPAALGSD 195 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA+ G G+K + G S G + + +LD G +TR D+ +L++A+AG D Sbjct: 196 TGGSVRIPAALNGITGLKTSAGLISLHGAVPLSQTLDSIGPMTRDAYDAMLLVQALAGPD 255 Query: 240 ECDATCVNLPVPDYE--RALDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDA 295 D + +P Y R + + G + + E Y L +S +Q L+ Sbjct: 256 AADPATLGVPAFVYAPPREGGRPLAGRRIAVMAEENYPL-AVSADASLAVRQAADTLRAL 314 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA++ ++ P + A+ + + E + Y + ++ Sbjct: 315 GAEVATVATP--------FDFTRLMHANGRI---------IAAEAYALHRGYIDDAALPL 357 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+ V+ R+ G + + + Y+ A + + + A+ Q D +LTP+ P +A Sbjct: 358 GEFVRARVQSGRAIGA-----ADYIAAMREHAQARAQW-RAWMQDYDALLTPSLPFAACR 411 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 L + + + F+ A N G +++PA +P+G+QL+G+PF + L Sbjct: 412 LDEVDEQGTPLA-----AFSRAGNFLGASGLALPAGFSADGLPVGVQLMGKPFDDGLLCG 466 Query: 476 VGQIIEK 482 +G ++ Sbjct: 467 LGVAFQQ 473 >gi|28872233|ref|NP_794852.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28855487|gb|AAO58547.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331016021|gb|EGH96077.1| amidase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 519 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 228/501 (45%), Gaps = 66/501 (13%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDK 61 +F + E + RL +++ ELV +Q IE N+ +NA IEV + AR A D+ Sbjct: 44 HFESSVELQKRLSEGSLTSAELVHDLLQRIEALNNNGPALNAVIEVNPE-ARRIATLLDR 102 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +G R L GIP+ +KD T + T A + + G Y++ V Q+L + GA+++ Sbjct: 103 ERSSGKQRGPLHGIPVLVKDNIDTADKMQTTAGALAMAGAPAQYDAFVVQRLREAGAIII 162 Query: 120 GKLNMDEFA--MGSSNETSYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCA 173 GK N+ E++ GS+ + G R + + +P GSS G + +VA Sbjct: 163 GKANLSEWSNFRGSNVPNGWSG------RGGQTRHPYDLAASPLGSSSGPAVSVAAGFAP 216 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GT+T GSI QPA+ +G VG++PT G SR G+I + D G + RTV D+AI+L Sbjct: 217 LAVGTETNGSIIQPAATSGVVGVRPTLGLLSRSGMIPISSRQDTPGPMARTVTDAAIMLT 276 Query: 234 AIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 A++G D D +P +Y RA +++G +G P + D D +Q+ Sbjct: 277 AMSGTDPLDKATYQVPGNTVSYVEYLRA--GALRGKRLGYPSKLP-DGRFMDDDPAFQKI 333 Query: 289 ISWLKDAGAKIVEISLPH-TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 L+ AGA +V + +P + A PA + + L Y R GL V D + + Sbjct: 334 KRNLRSAGAILVPVDVPLVSSMAEPAMLM---NDFKRELEAYLKTRPGLEVRTLDDIIAF 390 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRC---YDSHYLR---ARKIRTLIKRDFTEAFEQGV 401 N S G + ++ + + + YD+ LR + I L++R +A Sbjct: 391 -NVASPGPEGYSQDALIAASGTVVDQAIYFYDATDLRRSHQQLIDGLLQRHSLDAL---- 445 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 + E+ G++G I AG P +++P L + +P GL Sbjct: 446 --------------IDWSESAFGAVGAI-----------AGYPGMNLPVGLNNEGLPKGL 480 Query: 462 QLIGQPFREETLFSVGQIIEK 482 + + E L S +E+ Sbjct: 481 YFLSTAWDEAKLLSYAYALEQ 501 >gi|295133104|ref|YP_003583780.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Zunongwangia profunda SM-A87] gi|294981119|gb|ADF51584.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Zunongwangia profunda SM-A87] Length = 552 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 127/437 (29%), Positives = 197/437 (45%), Gaps = 63/437 (14%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM--- 129 GIP+ +KD T + T A S L G + +T KL ++GA++LGK N+ E+A Sbjct: 157 GIPVLLKDNINTSTMPTTAGSVALQG-NTTPNAFITNKLEESGAIILGKANLSEWAYFFC 215 Query: 130 --GSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S ++ G ++P+ R + F GGSS GS+ AVA ++G++T GSI Sbjct: 216 KDCPSGYSAVGGQTLNPYGRRI-----FDTGGSSSGSAVAVAANFAPLAVGSETSGSILS 270 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P+S VG+KPT G SR GII + +LD G IT+TV D+AILL A+AG D D Sbjct: 271 PSSQNSLVGLKPTIGLLSRTGIIPISSTLDTPGPITKTVMDNAILLSAMAGRDTSDTKVY 330 Query: 247 NLPVP---DYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + DY AL S++G+ +G+ KE T D + + I+ LK GA+IVE Sbjct: 331 ADSIKVTTDYYSALTDTTSLRGVRLGVIKEL-------TQDSLYSRAINELKKIGAQIVE 383 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-----LEMYENTRSIGFG 356 + L + + + +L Y RYG R+E + + M ++ + +G Sbjct: 384 FEAEAIE--LENFLRLLNLDMKKDLPDY-LERYGKRIEVRSVEDIMTFNMEDSVQRAPYG 440 Query: 357 QEVKHRIMI--GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 Q + I+ T D+ +R ++ + + E +D IL+ + F Sbjct: 441 QGLFEGIVKDNATAKEFQAIKDTLKIRGKRFFDIPMK------EHYLDGILSINNYHAGF 494 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 +A PAI+VP + P GL I P+ E+ L Sbjct: 495 -----------------------AAVAEYPAITVPMGYDDIGEPKGLTFISIPYSEQNLL 531 Query: 475 SVGQIIEKEAGYFRPHK 491 E+E+ +P K Sbjct: 532 RWAYAYEQESQQRKPPK 548 >gi|86360596|ref|YP_472484.1| hypothetical protein RHE_PE00322 [Rhizobium etli CFN 42] gi|86284698|gb|ABC93757.1| probable glutamyl-tRNA amidotransferase subunit A protein [Rhizobium etli CFN 42] Length = 456 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 127/463 (27%), Positives = 198/463 (42%), Gaps = 46/463 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+V++ ++S V++ ++ ++I N + + ++ +A A S KR+ G Sbjct: 8 MSVAQLSVLIQSGAADPVDVAETVFESIANYADKA-VFTTLLEGRAMEEARASSKRLREG 66 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 + L +GIPI KD F +G+ T A S +L P ++ + L G V +G+ NM Sbjct: 67 RSLGLLDGIPIAWKDLFDIEGLPTTAGSVVLAATAPASCDAAIVGLLRRAGMVAIGRTNM 126 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA +YG ++P R D PGGSS G+ AVA L ++GTDTGGS+ Sbjct: 127 SEFAFSGLGINPHYGTPVNP-RGTDLPR--IPGGSSSGAGVAVAAGLVPVAMGTDTGGSV 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+F G VG K T GR G+ A SLD G + R+VRD+ + DA Sbjct: 184 RIPAAFNGIVGYKATSGRHVMDGVYPLAKSLDSLGPLCRSVRDAVWI----------DAA 233 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L PD +++ ++G+ + +P+ D P + ++ + + AGA + + Sbjct: 234 MRGLTAPDV---IERPLRGLELLVPENVVFDAAEPGVVAAFEAALERFQSAGASVSRTII 290 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P L P + A + R+ G D + + HR++ Sbjct: 291 PAFNEILDLMTRYGPLVTAEAFALHQE-----RLAGPD-------------AERMDHRVV 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV-DVILT-PTTPTSAFPLGKEENN 422 + T L SR Y+ + R R ++ V D IL PT A P+ E N Sbjct: 333 MRTR-LGSRTTAPDYIAILEAR----RRLIGGVDRLVGDRILAFPTVAHVAPPIAPLEEN 387 Query: 423 SGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQL 463 N T N S+P E MP+GL L Sbjct: 388 DELFFATNNRTLRNTALGNFLDWCGASIPCGTGESGMPVGLLL 430 >gi|148258399|ref|YP_001242984.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] gi|146410572|gb|ABQ39078.1| Putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Bradyrhizobium sp. BTAi1] Length = 461 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 129/456 (28%), Positives = 184/456 (40%), Gaps = 58/456 (12%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +NA + + ++ RAAA D R+ G+ L G+P+ +KD +G S + F Sbjct: 34 LNAVVTIDPERTRAAAGAVDARVAAGEWLPLAGVPVVVKDNVWAEGWRITQGSRLFADFT 93 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +ST +L GAV++G EFA + YGP P + TPGGSS Sbjct: 94 APEDSTAIARLRRAGAVIVGIGATSEFACKGVTTSLLYGPTRHP-----QDPQLTPGGSS 148 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-- 218 GG + AVA L +IGTD GGS R+P + G VG KP+Y G I + P + Sbjct: 149 GGPATAVAAGLVPLAIGTDAGGSSRRPPAHVGVVGFKPSY------GAIPYGPGFAEPFW 202 Query: 219 -----GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 I V D+ + +A+AG D D + + +++G + + R Sbjct: 203 RISVIAPIAADVGDARLAFEAMAGADPRDPDSFD---------VCSAVEGKPLRVAFSPR 253 Query: 274 LDY---LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 L + + +Q I+ L G IV+ P L ++ A D Sbjct: 254 LGLDVAVDDDVSAGLRQTINRLCAGGMSIVDKD-PIWPAGLAEDAVMPLQHAGLAALHGD 312 Query: 331 GVRYGLRVEGKDILEMYENTRSIGF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 R DI + E R +G G +V A + T I Sbjct: 313 AFRSDPTQFDPDIAKQIE--RGLGLSGADVAG--------------------ALEASTRI 350 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 R F F VDV+LTPT P A+P LG E + VFT N AG+PAI Sbjct: 351 ARAFAALFTD-VDVLLTPTVPCVAWPFTQLGPVEIGGQPASPRAHAVFTPFANHAGVPAI 409 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 S+P +P GLQLI R+ L E+ Sbjct: 410 SIPCGKNADGLPFGLQLIAARGRDRMLLDAAAQAER 445 >gi|330957033|gb|EGH57293.1| amidase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 505 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 133/492 (27%), Positives = 214/492 (43%), Gaps = 52/492 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + ++++ ELV +Q IE N +NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGNLTSAELVADLLQRIEALNKNGPALNAVIEVNPDALQIAAQLDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G ++ V Q+L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNLNTGDKMQTTAGALAMVGSPAPNDAFVVQRLREAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 N+ E+A N + G + P+ + TP GSS GS+ +A ++G Sbjct: 162 TNLSEWANFRGNAPDGWSGRGGQTLHPYNLSE-----TPRGSSAGSAVGLAAGFAPLALG 216 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI QPA G VG++PT G SR G+I D G + RTV D+AI+L A++G Sbjct: 217 TETNGSIIQPALTNGVVGLRPTLGLLSRTGLIPLTSRQDTPGPMARTVTDTAIMLTAMSG 276 Query: 238 YDECD-------ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 D D A VN + +++G +G P+ D + IS Sbjct: 277 TDPLDDATGQASANTVNY----VDNLSTDALRGKRLGYPRLTWDDKSMDDDPDFKKAKIS 332 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ AGA +V I +P P + ++ + L Y R GL V D + + Sbjct: 333 -LQSAGAILVPIDVPDIDNG-PEFDVML-QDFKRELNAYLNTRPGLEVSTLDDIIAFNTA 389 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 G + R++I + S+ D YL D A +Q +D +L Sbjct: 390 SPSAEGYD--QRVLIQS---SNTPVDPDYLSK-------ATDLRNANQQLIDGLL----- 432 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++N+ ++ + F +AG P I+VP + MP GL + + E Sbjct: 433 --------QQNSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSTAWDE 484 Query: 471 ETLFSVGQIIEK 482 L S +E+ Sbjct: 485 ADLLSYAYALEQ 496 >gi|298249679|ref|ZP_06973483.1| Amidase [Ktedonobacter racemifer DSM 44963] gi|297547683|gb|EFH81550.1| Amidase [Ktedonobacter racemifer DSM 44963] Length = 532 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 124/538 (23%), Positives = 225/538 (41%), Gaps = 70/538 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++ L ++ SE + +S+ E+V+++I+ IE N +NA + + +ARA A ++D Sbjct: 11 VAHLTHLSASELAHSIAEGHLSSEEVVEAHIRQIETVNPLLNAVVVPLFAQARAEARKAD 70 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVM 118 + G + L G+PI +K+ F G T + RP +E + Q+L GA++ Sbjct: 71 SMLAQGTSVGPLHGVPITLKEQFMVSGTPT-TVGIMSQRSRPMEHEGPLVQRLRQAGAIV 129 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+ + M ++ YG +PW TPGGSSGG +A +A +G Sbjct: 130 LGKTNVSQLLMYHESDNPVYGRTNNPW-----DLARTPGGSSGGEAAIIAAGGSPLGLGG 184 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI------ITRTVRDSAILL 232 D GGSIR PA F G + PT R + L A Q I I R+V D + + Sbjct: 185 DFGGSIRVPAHFCGLYSLLPTARRLTHLDTAHHAYVAGQEAIIAQPAPIARSVEDLRLAM 244 Query: 233 KAIA--GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +A G + D + +P PD S++G+ +G+ + ++P++ + ++ Sbjct: 245 NILAAPGLNALDPSVPPVPWPDPTAV---SLRGLRIGMYTNNGVFSVAPSVRRAVEEAAQ 301 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG-------VRYGLRVEG--- 340 L+ GA + + P A+ Y + A+ + R G + + +RV Sbjct: 302 VLRARGAIVESWNPPDVAEAIQIYVGLVGADGFATHKRNLGRDTRDRRISFNMRVSSLPG 361 Query: 341 ---KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 ++ + + + ++H + R Y R ++ F A Sbjct: 362 IVRAPLVGLLKRRGQVHMASSLQH--------IRGRLSVEQYWHLVGERNQYRQHFLTAL 413 Query: 398 E-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP------- 449 + + D +L P A G +SG++ + + N+ GLPA P Sbjct: 414 DAEHFDALLCPPHALPALTHG----SSGTLNVTNAGSYAILYNLLGLPAGVAPITRVRPG 469 Query: 450 ------------------AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + +P+G+QL+ +P+RE+ + ++ +E+ G P Sbjct: 470 EESERSIGKDSVERAARTVEMGSAGLPVGVQLVARPWREDIVLALMAALEEHTGASVP 527 >gi|152988928|ref|YP_001350248.1| amidase [Pseudomonas aeruginosa PA7] gi|150964086|gb|ABR86111.1| amidase family protein [Pseudomonas aeruginosa PA7] Length = 496 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 131/483 (27%), Positives = 219/483 (45%), Gaps = 42/483 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIINGDARD-LEG 73 +R +++S E++ +Y+ IE N ++NA + + + A A+E D+++ G+ + G Sbjct: 26 IRRRELSCREVMRAYLAQIERFNPRVNAIVSLRPESLLLAQADERDRQLARGEWLGWMHG 85 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P +KD AT GI T S + G P +++ + ++ +GA+++GK N+ EF +GS Sbjct: 86 MPQAVKDLAATAGIPTTLGSPLFAGQVPAHDAIIVERARRSGAIVIGKTNVPEFGLGSQT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G + + D + T GGSSGG++ A+A + + G+D GS+R PA++ Sbjct: 146 YNRVFGTTRN---AYDPSR--TAGGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNI 200 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVP 251 G +P+ GR F L G + R+V D A LL AGYD C + + P Sbjct: 201 YGFRPSQGRVPHGPQPELFVQQLATEGPMGRSVADVARLLATQAGYDPRCPLSLRDDPG- 259 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AKIVEISLPHTQYA 310 + L++ G +G +Y YL PT ++G+ L DA E+ + Sbjct: 260 VFASDLERDFHGARLGWLGDY-AGYL-PT-----EEGVLALCDAALGDFAELGC-EVEAC 311 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTYV 369 LP Y + L V V+G + E+Y + R E + + G + Sbjct: 312 LPDYSL-------ERLWCSWLVHRQWLVQGS-LGELYADPVRRARLKPEAQWEVESGLGL 363 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 ++ Y RA R+ R FE+ D +L PT FP E +G Sbjct: 364 TAAEVY-----RAALDRSDWYRALARLFER-YDFLLLPT--AQVFPFDAEIPWPRQVGGR 415 Query: 430 YNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D + + +AGLPAISVP +P+GLQ+IG + + + + EK Sbjct: 416 PMDTYHRWMEVVIGATLAGLPAISVPIGFGAAGLPMGLQIIGPAQADLAVLQLARAHEKL 475 Query: 484 AGY 486 G+ Sbjct: 476 TGW 478 >gi|229548158|ref|ZP_04436883.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis ATCC 29200] gi|257091232|ref|ZP_05585593.1| amidase [Enterococcus faecalis CH188] gi|312902088|ref|ZP_07761349.1| amidase [Enterococcus faecalis TX0470] gi|312905291|ref|ZP_07764406.1| amidase [Enterococcus faecalis TX0635] gi|229306708|gb|EEN72704.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis ATCC 29200] gi|257000044|gb|EEU86564.1| amidase [Enterococcus faecalis CH188] gi|310631315|gb|EFQ14598.1| amidase [Enterococcus faecalis TX0635] gi|311290870|gb|EFQ69426.1| amidase [Enterococcus faecalis TX0470] gi|315162470|gb|EFU06487.1| amidase [Enterococcus faecalis TX0645] gi|315578569|gb|EFU90760.1| amidase [Enterococcus faecalis TX0630] Length = 482 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 133/516 (25%), Positives = 224/516 (43%), Gaps = 80/516 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S +EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRIELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYE-RALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P+ +++ Q ++ + P R+ SP + +Q +L AG +I+E Sbjct: 229 APYQAPLAEWQTHTKKQRLKIALCTASPIGSRI---SPEATQAAKQAADFLAAAGHEIIE 285 Query: 302 ISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEV 359 I P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 286 IPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ-- 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +I TYV S + +D + E Q D+ L+PTT SA + ++ Sbjct: 340 --KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSAPKINED 385 Query: 420 --------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAISVPAALCEKK 456 E + + D F T N+ G PAIS+P + Sbjct: 386 LQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTATG 445 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 446 LPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|33599394|ref|NP_886954.1| putative amidase [Bordetella bronchiseptica RB50] gi|33566990|emb|CAE30903.1| putative amidase [Bordetella bronchiseptica RB50] Length = 472 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 137/487 (28%), Positives = 224/487 (45%), Gaps = 37/487 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSEL F +++E L + SAVEL Y+ I +N ++AY+ V A A+ +D Sbjct: 1 MSELAFSSLAELARGLEAGRYSAVELARHYLARIARANEALHAYVSVDEAGALRLAQAAD 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G A L+G+PI IKD +G T A S R T ++L G V+L Sbjct: 61 ARRAAGYALGPLDGLPIAIKDLCEIEGQVTTAGSAAWRERRSKVTGTAVRRLLAAGMVVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M EFA G G +PW D + PGGSS GS AVA L A++G+D Sbjct: 121 GKTHMVEFAFGGWGTNPVMGTPRNPW---DLSHPRIPGGSSSGSGVAVAAGLAPAALGSD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA+ G G+K + G S G + + +LD G +TR D+ +L++A+AG D Sbjct: 178 TGGSVRIPAALNGITGLKTSAGLISLHGAVPLSQTLDSIGPMTRDAYDAMLLVQALAGPD 237 Query: 240 ECDATCVNLPVPDYE--RALDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDA 295 D + +P Y R + + G + + E Y L +S +Q L+ Sbjct: 238 AADPATLGVPAFVYAPPREGGRPLAGRRIAVMAEENYPL-AVSADASLAVRQAADTLRAL 296 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA++ ++ P + A+ + + E + Y + ++ Sbjct: 297 GAEVATVATP--------FDFTRLMHANGRI---------IAAEAYALHRGYIDDAALPL 339 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+ V+ R+ G + + + Y+ A + + + A+ Q D +LTP+ P +A Sbjct: 340 GEFVRARVQSGRAIGA-----ADYIAAMREHAQARAQW-RAWMQDYDALLTPSLPFAACR 393 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 L + + + F+ A N G +++PA +P+G+QL+G+PF + L Sbjct: 394 LDEVDEQGTPLA-----AFSRAGNFLGASGLALPAGFSADGLPVGVQLMGKPFDDGLLCG 448 Query: 476 VGQIIEK 482 +G ++ Sbjct: 449 LGVAFQQ 455 >gi|302060446|ref|ZP_07251987.1| amidase family protein [Pseudomonas syringae pv. tomato K40] Length = 452 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 135/473 (28%), Positives = 205/473 (43%), Gaps = 38/473 (8%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 ++ + L + + I+ N +NA+ +V A+ A A + G R L GIP GIK Sbjct: 1 MTPIRLTELCLSVIKTHNPTLNAFGDVYAEAALEQAWTMTAELQRGKPRGPLHGIPFGIK 60 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D F+T G+ T S P ++ + ++L GA++LGK EF ++ + +G Sbjct: 61 DLFSTAGLRTTRGSLTALDAVPAQDAPIIRRLKGAGAIILGKTATTEFGWTGASTSRVFG 120 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW D T T GGSS GS+ AVA + A++G+D GGS+R P SF G +K T Sbjct: 121 NGRNPW---DPT--LTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIPGSFCGAFALKGT 175 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 GR S L AG ITRTVRDSA+L ++G D D LP PD E L + Sbjct: 176 LGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLSGPDPLDHQA--LPAPD-ESFLAR 231 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 Q + K R+ + D I+ +A + SLP T L + Sbjct: 232 CDQPL-----KPLRIGFCPTLFDTPVDPQIAAAVEAAVANIARSLPVTVSTLTLDWQDPL 286 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 A + G+ YG LE + GF + ++ G Y Sbjct: 287 ATFETLWVAGRGIAYG------KALEQQLDQLDPGFAELIRRSANYGL---------DDY 331 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEENNSGSMGHIYNDV 433 L+A + R FE D+++ PT P F P G +S ++ Sbjct: 332 LQAMQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAGQDS-ALPWARWTP 389 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 FT N++G PA ++P + +P+GLQ++G F + + +E A + Sbjct: 390 FTYPFNISGNPAANLPCGWSTEGLPIGLQVVGPRFADAHVLQFCAAVEAIAPW 442 >gi|294678846|ref|YP_003579461.1| amidase family protein [Rhodobacter capsulatus SB 1003] gi|294477666|gb|ADE87054.1| amidase family protein [Rhodobacter capsulatus SB 1003] Length = 438 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 125/465 (26%), Positives = 208/465 (44%), Gaps = 76/465 (16%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 + VE+V++Y+ A + + + Y + ++AR+ A + R+ G AR LEG+ + K Sbjct: 20 LDPVEMVEAYLDA---AAGRGDVYARLTPERARSEAMAARTRLRGGLARGPLEGVALSWK 76 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 D F T GI T+A S +L G P ++ V Q G+V LGK +M E A + G Sbjct: 77 DLFDTAGIATEAGSQLLAGRVPDTDAEVLQAATLMGSVCLGKTHMTELA--------FSG 128 Query: 140 PVISPWRSMDS---TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 I+P + T PGGSS G++ +V L AA++G+DTGGS+R PA++ VG+ Sbjct: 129 LGINPMTATPPNAVTAGLAPGGSSSGAAVSVKLGLAAAAVGSDTGGSVRIPAAWNDLVGL 188 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G++ D G + RTV D A++L A+ G D Sbjct: 189 KTTQGRVSTAGVVPLCKRFDTVGPLARTVEDCALVLAALEGRTAPD-------------- 234 Query: 257 LDQSIQGMTVGIPKEYRLDYL-------SPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G T+ + LD L +P + ++ ++ L+ AGA+I LP + Sbjct: 235 ----LRGSTLSGTRLLVLDGLPFASAREAPV--RGFEAAVTRLEKAGARIERRVLPMLEP 288 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A+ I+ EA YGL E I E + +++ + Sbjct: 289 AMDLSGILFAPEA-----------YGLWAE------------VIEAAPEKMYPVILQRFR 325 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG-- 427 + + Y++A + ++ D+ A G D +L PT P + + Sbjct: 326 GGAAINAADYVKAWDLLARLRGDWQAAV-AGYDAVLVPTAPILPPDAARLLTDPAYFAAE 384 Query: 428 HIYNDVFTVAVNMAGLPAISVPAA--LCEKKMPLGLQLIGQPFRE 470 ++ T N+ GL A+++P +C G+ L+G+P +E Sbjct: 385 NLLALRNTRIANIFGLCALTLPTGEPMC------GISLMGKPMQE 423 >gi|256618251|ref|ZP_05475097.1| amidase [Enterococcus faecalis ATCC 4200] gi|256597778|gb|EEU16954.1| amidase [Enterococcus faecalis ATCC 4200] gi|315033670|gb|EFT45602.1| amidase [Enterococcus faecalis TX0017] Length = 482 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 133/515 (25%), Positives = 222/515 (43%), Gaps = 78/515 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQKAEATYQKNKQQ-----DTLFAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPVLYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVEI 302 P+ +++ + Q + + + + L SP + +Q +L AG +I+EI Sbjct: 229 APYQAPLAEWQTHTKK--QRLKIALCTASPIGSLISPEATQAAKQAADFLAAAGHEIIEI 286 Query: 303 SLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVK 360 P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 287 PYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ--- 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +I TYV S + +D + E Q D+ L+PTT SA + ++ Sbjct: 340 -KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSAPKINEDL 386 Query: 420 -------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAISVPAALCEKKM 457 E + + D F T N+ G PAIS+P + + Sbjct: 387 QSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTATGL 446 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 447 PLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|323528200|ref|YP_004230352.1| Amidase [Burkholderia sp. CCGE1001] gi|323385202|gb|ADX57292.1| Amidase [Burkholderia sp. CCGE1001] Length = 484 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 134/479 (27%), Positives = 210/479 (43%), Gaps = 73/479 (15%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA + A AAA D A+ L G+PI +KD T G+ T A + L+GF Sbjct: 45 NALTVIDLDGALAAARRIDALSAEAKAQLPLAGLPIVVKDNINTVGLPTSAGTPALEGFV 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGG 158 P + Q+L D GA++LGK NM E A G S+N ++ GPV +P+ D T PGG Sbjct: 105 PDANAPSVQRLLDAGAIILGKANMHELAFGITSTNLAAHAGPVRNPY---DPT--LIPGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISF 211 SSGG++AA+A + A +GTDTGGS R PA+ TGT G +P+ G ++ Sbjct: 160 SSGGTAAAIAARIAPAGLGTDTGGSTRIPAALTGTAGFRPSVGNGGSERRYHDPDAVVPI 219 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + + D G + R+ D A+L I+G A +N G+ +G+P Sbjct: 220 SHTRDTVGPMARSAADIALLDGVISGAGPLPAIALN---------------GLRIGLPAP 264 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ---------YALPAYYIISPAEA 322 L+ ++ + + L AG V + + + A+ + A Sbjct: 265 LWAG-LAQQVEDVARAALKKLDAAGVVFVPVQMSELEDLNGMVGGPIAIHEARVDVKAWL 323 Query: 323 SSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 +N A V R+ D+ E+Y+ ++ G DS Y Sbjct: 324 VANHAPVQTVAELAARIASPDVREIYD-------------AVLAG-------ALDSRYEA 363 Query: 382 A-RKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIYNDVF-- 434 A R L++ F ++ +D +L PTT +A P+ E N S ++ G D Sbjct: 364 ALNHWRPLLQAYMAATFADERLDALLFPTTRLTAVPM-DEINGSSTVSIDGAPPVDTMEA 422 Query: 435 ----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 T + AG+P +S+PA + + +P+GL+L G + L ++G E+ G P Sbjct: 423 FLRNTDPASTAGIPGLSLPAGISAQGLPVGLELDGPLGSDRHLLAIGVAFEQLLGEVPP 481 >gi|315171570|gb|EFU15587.1| amidase [Enterococcus faecalis TX1342] Length = 482 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 223/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L ++ G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYSLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-----------LSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSRISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIESFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|315149151|gb|EFT93167.1| amidase [Enterococcus faecalis TX0012] Length = 482 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 222/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|257417842|ref|ZP_05594836.1| amidase [Enterococcus faecalis T11] gi|257159670|gb|EEU89630.1| amidase [Enterococcus faecalis T11] Length = 482 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 135/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQ-----DTLFAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S +K G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKKAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATLAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|293602817|ref|ZP_06685257.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292818833|gb|EFF77874.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 442 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 132/483 (27%), Positives = 216/483 (44%), Gaps = 62/483 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + LN + ++ +L+ ++++AV+LV + IE + ++A+ + Q A A+ D Sbjct: 3 TALNSLGAVQAARKLQRRELTAVQLVRACFARIEQRENTIHAWTALQKQAALDVAQVLDD 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L G+PIG+KD F T + T+ S I + RP ++ GA+++GK Sbjct: 63 GPLQGP---LHGLPIGVKDLFDTVDLPTRYGSPIYERHRPGLDAAAVALCRGAGAIVVGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EFA T GP +P + +TPGGSS GS+AAVA + ++G+ T Sbjct: 120 TVTTEFA------TYQAGPTRNP-----RNEAYTPGGSSSGSAAAVADDMVPFALGSQTA 168 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI +PAS+ G VG KPT+G R G+ S A SLD G R+V D A+ + Sbjct: 169 GSIIRPASYCGIVGFKPTFGAIPRAGVKSLAESLDTVGGFARSVPDVALFASVMMR---- 224 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DA NL R VG+ + + + + + Q + L AGA + E Sbjct: 225 DARMQNLSYDAKPR----------VGMCRTLQWRHAQAETKEAFAQAAATLSRAGAVVKE 274 Query: 302 ISLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + LP L + I EAS +LA YE + G Sbjct: 275 VPLPSQDCMLVQLHADIMAYEASQSLA-------------------YERLQHAGQLSPKI 315 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 ++ +++ + + RA + R + F + DV+L P+ A P + Sbjct: 316 QAVLEAGAQITAEEHIRNLARAEESRARVNSWFDD-----YDVVLAPSAAGEA-PFA--D 367 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +G + F+ + GLP +++P A + +P+GLQLIGQ + + ++G I Sbjct: 368 LGTG------DPQFSRPWTLFGLPCLNLPFATGPQGLPVGLQLIGQRYDDYRTLAIGAWI 421 Query: 481 EKE 483 K+ Sbjct: 422 HKQ 424 >gi|254283152|ref|ZP_04958120.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR51-B] gi|219679355|gb|EED35704.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR51-B] Length = 443 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 128/466 (27%), Positives = 205/466 (43%), Gaps = 63/466 (13%) Query: 28 DSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGI 87 D+ +AIE+ N +NA I Q A + + + ++ IKDC G+ Sbjct: 13 DATQRAIEHINPLINAVIHPEIQ-APGNSSKPTRTVL-------------IKDCMHVAGM 58 Query: 88 HTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 T S I ++TV +L + GK ++ EF G++ + YG +PW Sbjct: 59 PTTYGSQIFSNNTAETGDATVVGRLRQHNVTFAGKAHLTEFCFGATGQNECYGNCKNPW- 117 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 TD+ T G SSG ++A +G + A +GTDTGGS+R PAS G VG++PT GR Sbjct: 118 ---DTDRITGGSSSGSAAAVASGMVRMA-LGTDTGGSVRVPASLCGVVGLRPTMGRVPNT 173 Query: 207 GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV-----NLPVPDYERALDQSI 261 G + + D G + +V ++A L AI GYD D + +LP L+Q + Sbjct: 174 GCLDVSTISDTIGPLAASVTEAAWLFDAIHGYDAADPNSIATGDASLPT------LEQGV 227 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 +G+ VG Y + + I+ + L+ GA++++ +P E Sbjct: 228 EGIAVGRLGGYFSENIEYDIESRLDEVARLLESQGARLID----------------TPPE 271 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTR-SIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 + + + R+ L ++ +TR G EV+ RI +G V S Sbjct: 272 NDTAIREHHAFRFILADVADARSDLMRDTRLRECLGAEVRRRIELGQAV-------SGVE 324 Query: 381 RARKIRTL--IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV--FTV 436 A IR+L ++R F G D++L PTTP +A PL ++ S M V T Sbjct: 325 YAASIRSLLGLRRWLRNLFSGGTDLLLLPTTPMTA-PLWRD---SADMVETTRKVAGLTY 380 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + G+P++SVP L +P+G L E L + +E+ Sbjct: 381 DLGATGIPSVSVPMGLDRNGLPMGAMLAASWGNEALLLRAARAVER 426 >gi|111020485|ref|YP_703457.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus jostii RHA1] gi|110820015|gb|ABG95299.1| probable glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus jostii RHA1] Length = 453 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 125/474 (26%), Positives = 200/474 (42%), Gaps = 61/474 (12%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPI 76 ++++SA E++D ++ I+ N ++NA + V +A AA++ D RI G D L G+P Sbjct: 22 NREVSASEVLDDHLAHIKARNPELNAVVTVAEDQAIRAADDLDTRIGRGEDVGPLAGVPF 81 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD AT G+ T A S L+ P ++ + GA+++GK N EF Sbjct: 82 TVKDLIATAGVRTTAGSRALEHNVPRVDAPAVAAMRAAGAILVGKTNTPEFGASGLTHND 141 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G ++P R D + +PGGSSGG +AA+A + +GTD GGS+R PA TG + Sbjct: 142 LFGYTVNPLRP-DGVAR-SPGGSSGGEAAAIASGMSVVGLGTDFGGSVRWPAHCTGLRSV 199 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 +PT GR G PS D T+ + + +A R Sbjct: 200 RPTIGRVDPDGQYPGVPSGDHLLTNPATMHGTLQTIGPMA------------------RT 241 Query: 257 LDQSIQGMTVGIPKEYR-LDYLS---PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 LD + + V ++YR D S P +D TW G G V+ + Sbjct: 242 LDDAALVLRVLSSRQYRWTDPASVDLPGLDITWAPG------DGTVPVDTEIVAAVAGAA 295 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDI------LEMYENTRSIG--FGQEVKHRIM 364 P Y G EG D+ +E + + +G FG + + Sbjct: 296 GRLCARP---------YRGAALS---EGNDLFGTLRSVETHTDIEELGTDFGTNIAMMLA 343 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 V RA + L+ E G DV++ P A PLG+E + G Sbjct: 344 DARDVDRRLVERLWAQRAELVHRLLG-------EMG-DVLVLPVASIPAPPLGEELFDVG 395 Query: 425 SMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 ++ A+++ GLP+I VP +P+G+Q++ +P+ E +V Sbjct: 396 GHSLTWSQALASCRAISVTGLPSIVVPVGSTRSGLPIGVQVVARPWCEHVALAV 449 >gi|330951966|gb|EGH52226.1| amidase [Pseudomonas syringae Cit 7] Length = 507 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 136/489 (27%), Positives = 226/489 (46%), Gaps = 42/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E R + +K +S VEL+D+ I+ IE+ N ++NA+ ++AR A ++ Sbjct: 5 SELLGKSATELRALIGNKQLSPVELLDACIERIESLNPKLNAFAATCFERARDEALLAEH 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+PIGIKD T G+ T S + P ++ +L GA+++G Sbjct: 65 AVLQGKPLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIVVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 125 KTNVPELGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG Sbjct: 180 GGSLRIPAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLG 238 Query: 240 ECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + D + + R +D S + VG +++ + I +++ IS LK Sbjct: 239 QSDPLSYAIADDAFAPRTVDLS--QLRVGYSEDFGACAVDDRIRAVFREKISALKSLFKS 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 I L T A + ++ R + GL+ +D + NTR+ Sbjct: 297 CEAIDLNLTN-----------AHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA----- 340 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-- 415 +G + C +H ++R I R F + FE D+IL PTTP S FP Sbjct: 341 ----NFDMGAAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDLILAPTTPVSPFPWS 390 Query: 416 -LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 L E N + + Y + + + PA+S+P MP GLQ+IG + L Sbjct: 391 ELYLREVNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGGFRGDAKL 450 Query: 474 FSVGQIIEK 482 + + +E+ Sbjct: 451 LACAEALEQ 459 >gi|242075194|ref|XP_002447533.1| hypothetical protein SORBIDRAFT_06g002860 [Sorghum bicolor] gi|241938716|gb|EES11861.1| hypothetical protein SORBIDRAFT_06g002860 [Sorghum bicolor] Length = 513 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 28/306 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRIINGDAR-- 69 ++ +++ LV Y+ I N ++A IEV + Q A+A AE +R +GDA+ Sbjct: 39 FKNGSLTSTALVQHYLSQISRLNPLLHAVIEVNPDALRQAAQADAER--RRSSSGDAKIA 96 Query: 70 -DLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ +KD AT+ G++T A S L G ++ V +L GAV+LGK NMDE+ Sbjct: 97 GGLHGVPVLLKDNIATRDGLNTTAGSLALLGSVVRRDAGVVARLRRAGAVVLGKANMDEW 156 Query: 128 A-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 A +G+ + G +P+ P GSS G + A A + A ++GT+T G Sbjct: 157 ANFRSAIGTGGWSPRGGQGKNPY-----VLSSPPCGSSTGPAIAAAANMAAVTLGTETDG 211 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI P+S VGIKPT G SR G+I +P D G I RTV D+ +L AI GYDE D Sbjct: 212 SILCPSSLNSVVGIKPTVGLTSRAGVIPISPRQDTVGPICRTVADAVHVLDAIVGYDELD 271 Query: 243 ATCVNLP---VPD--YERALD-QSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDA 295 A +PD Y + L ++G +G+P + D+ ++ K + Q + L+ Sbjct: 272 AVATRAASKYIPDGGYTQFLKVDGLEGKRIGVPNVF-FDFPDGSVRQKVYHQHLDTLRRN 330 Query: 296 GAKIVE 301 GA ++E Sbjct: 331 GAVVIE 336 >gi|213969452|ref|ZP_03397589.1| amidase family protein [Pseudomonas syringae pv. tomato T1] gi|301382663|ref|ZP_07231081.1| amidase family protein [Pseudomonas syringae pv. tomato Max13] gi|302061840|ref|ZP_07253381.1| amidase family protein [Pseudomonas syringae pv. tomato K40] gi|302130956|ref|ZP_07256946.1| amidase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925823|gb|EEB59381.1| amidase family protein [Pseudomonas syringae pv. tomato T1] Length = 519 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 228/501 (45%), Gaps = 66/501 (13%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDK 61 +F + E + RL +++ ELV +Q IE N+ +NA IEV + AR A D+ Sbjct: 44 HFESSVELQKRLSEGSLTSAELVHDLLQRIEALNNNGPALNAVIEVNPE-ARRIATLLDR 102 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +G R L GIP+ +KD T + T A + + G Y++ V Q+L + GA+++ Sbjct: 103 ERSSGKQRGPLHGIPVLVKDNIDTADKMQTTAGALAMAGAPAQYDAFVVQRLREAGAIII 162 Query: 120 GKLNMDEFA--MGSSNETSYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCA 173 GK N+ E++ GS+ + G R + + +P GSS G + +VA Sbjct: 163 GKANLSEWSNFRGSNVPNGWSG------RGGQTRHPYDLAASPLGSSSGPAVSVAAGFAP 216 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GT+T GSI QPA+ +G VG++PT G SR G+I + D G + RTV D+AI+L Sbjct: 217 LAVGTETNGSIIQPAATSGVVGVRPTLGLLSRSGMIPISSRQDTPGPMARTVTDAAIMLT 276 Query: 234 AIAGYDECDATCVNLP-----VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 A++G D D +P +Y RA +++G +G P + D D +Q+ Sbjct: 277 AMSGTDPLDKATYQVPGNTVSYVEYLRA--GALRGKRLGYPSKLP-DGRFMDDDPAFQKI 333 Query: 289 ISWLKDAGAKIVEISLPH-TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 L+ AGA +V + +P + A PA + + L Y R GL V D + + Sbjct: 334 KRNLRSAGAILVPVDVPLVSSMAEPAMLM---NDFKRELEAYLKTRPGLEVRTLDDIIAF 390 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRC---YDSHYLR---ARKIRTLIKRDFTEAFEQGV 401 N S G + ++ + + + YD+ LR + I L++R +A Sbjct: 391 -NVASPGPEGYSQDALIAASGTVVDQAIYFYDATDLRRSHQQLIDGLLQRHSLDAL---- 445 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 + E+ G++G I AG P +++P L + +P GL Sbjct: 446 --------------IDWSESAFGAVGAI-----------AGYPGMNLPVGLDNEGLPKGL 480 Query: 462 QLIGQPFREETLFSVGQIIEK 482 + + E L S +E+ Sbjct: 481 YFLSTAWDEAKLLSYAYALEQ 501 >gi|238765049|ref|ZP_04625985.1| Amidohydrolase, AtzE family [Yersinia kristensenii ATCC 33638] gi|238696735|gb|EEP89516.1| Amidohydrolase, AtzE family [Yersinia kristensenii ATCC 33638] Length = 439 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 125/463 (26%), Positives = 201/463 (43%), Gaps = 49/463 (10%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHT 89 + I N +NAY + A + A D G A L IP +K+ F G T Sbjct: 4 LDTINAVNPAINAYTHITADRMLCEAHRLDTLRAKGQALPLLAAIPYAVKNLFDVAGETT 63 Query: 90 QACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 A + + P ++ V +L GA++ G LNMD +A G + E S+YG +P + Sbjct: 64 LAGASLFCERAPARQDAPVISRLSQQGALLSGMLNMDAYAYGFTTENSHYGATRNP-HDL 122 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 + + GGS+ +A + F S+G+DT GSIR PA+ G G+KPT+GR SR G Sbjct: 123 NRIAGGSSGGSAAAVAAGLVNF----SLGSDTNGSIRVPAALCGIFGLKPTFGRLSRGGT 178 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 F SLD G + R +D A + + G D D+ + P L + QG+ + Sbjct: 179 QPFVASLDSIGPMARCTQDLAAVYDVMQGVDIQDSFQSDKPNTPSLNLLSRGQQGLRSAV 238 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 Y + Q L+ E +P + A A +IIS AE Sbjct: 239 LGGYFQQWCDDDAKAAVQAVAKGLEAE----TETEMPQSDLARTAAFIISAAEG------ 288 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 G +Y + + E+ + F + R++ G + + S Y++A++ R Sbjct: 289 --GNQY--------LPALRESPQR--FEPLSRERLLAGAMLPA-----SWYVQAQRFRHH 331 Query: 389 IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--------SGSMGHIYNDVFTVAVNM 440 ++ FE D+++ P TP SA +G+E SMG + T ++ Sbjct: 332 FRQQILPLFEHW-DILIAPATPCSATLIGQEMMQINDIDLPIRASMG-----MLTQPISF 385 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 GLP ++VP +P+G+QLI P+RE+ +E++ Sbjct: 386 LGLPVVTVPLK-TAGGLPIGVQLIAAPWREDLCLRAAYALEQQ 427 >gi|282855709|ref|ZP_06265016.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Pyramidobacter piscolens W5455] gi|282586441|gb|EFB91702.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Pyramidobacter piscolens W5455] Length = 483 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 132/513 (25%), Positives = 209/513 (40%), Gaps = 78/513 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIIN 65 M E + + +S E++ SY+ I+ +N ++NA + V +A A + D + + Sbjct: 8 MTAVELSKAIHAGKVSCREVMASYLDHIDKTNPRVNAIVTRVDGEALLEEAGKKDAELAS 67 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G D + G P +KD TKGI T S +L + P + + + +GA+++GK N Sbjct: 68 GRDNGWMHGFPQAVKDLVPTKGIRTTKGSLLLKDWIPDADGAIVTAMKRDGAIIIGKTNT 127 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF GS + +G +P+ + T GGSSGG++ AVA + A + G+D GS+ Sbjct: 128 PEFGYGSQSYNEVFGATGNPY-----DENRTSGGSSGGAACAVALRMQAVADGSDFMGSL 182 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD----- 239 R PA + V ++P+ G G F S+ G + RTV D A+L +AGYD Sbjct: 183 RNPAGWCNIVSLRPSIGAVPSGGTELFTNSMSTNGPMGRTVADVALLFATMAGYDAKFPL 242 Query: 240 --ECDATCVNLPVPDYERALDQSIQGMTVG--------IPKEYRLDYLSPTIDKTWQQGI 289 E D L + AL + +G+ VG +P E P + +T + + Sbjct: 243 SREADPRVKALTPANVREALKKDQKGVRVGWIGDWGGALPTE-------PGVMETCRAAV 295 Query: 290 SWLKDAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGL-------RVEG 340 +KD GA + +I ++ + I ASS YD R L EG Sbjct: 296 ERMKDFGAVVEDIEPFYNMNEFWETIWLPIRHYCASSLKPWYDKCRQNLMKPESRWEYEG 355 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + E R+ E H ++ R YD + Sbjct: 356 SLTMSAQEVYRAFEKRTEFYHSML--------RVYDDY---------------------- 385 Query: 401 VDVILTPTTPTSAFPLGKE----ENNSGSMGHIYNDVFTVAV--NMAGLPAISVPAAL-C 453 D I++PT FP K E G+ Y++ + M G +VPA Sbjct: 386 -DYIVSPT--ACCFPFDKSVHWPEAIDGTPMRTYHNWMEIVTPWTMGGNAVCTVPAGFGG 442 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 ++ +GLQL+ P RE E G+ Sbjct: 443 ANRLSIGLQLVAAPHREFEALQFASAYEAVTGF 475 >gi|257486106|ref|ZP_05640147.1| amidase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 330 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 22/327 (6%) Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 +IG D GGSIR P++++G VG KPTY G ++D G + VRD A++L Sbjct: 6 AIGGDQGGSIRMPSAWSGIVGHKPTYSLVPYTGAFPIERTIDHVGPMANNVRDCAVMLDV 65 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLS-PTIDKTWQQGISWL 292 IAG D D+ N P LDQ + G+ +G+ +E + + +S P +D + ++ L Sbjct: 66 IAGADGLDSRQKNPPAVSCVATLDQGVAGLKIGLLREGFAIPGMSEPQVDALVRAAVAQL 125 Query: 293 KDAGAKIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYE 348 + GA + E S+P H AL + +I+ A+ + + +G YG+ V+G DI+ + Sbjct: 126 ESLGATVGEASVPWHRGVALDMWNVIATDGAAYQMLQGNG--YGMNVDGYYDPDIMSYFG 183 Query: 349 NTR---SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 R + V+ + G Y L + + ++Y +AR + + R + EAF+ DV++ Sbjct: 184 TRRREHANALSSSVRAVALTGHYSLKN-LHGAYYAKARMLVPELTRQYDEAFKN-FDVLV 241 Query: 406 TPTTPTSAFPLGK-----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 PT P A L EE ++ + N T ++ G PA S+PA L E +P+ Sbjct: 242 LPTMPFVATTLTAADAPIEEYVHSALNMLAN---TAPFDLTGHPATSIPAGLAE-GLPVA 297 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYF 487 + ++ F++ V Q E G F Sbjct: 298 MMIVAPRFKDALALRVAQAYETARGAF 324 >gi|332716026|ref|YP_004443492.1| amidase family protein [Agrobacterium sp. H13-3] gi|325062711|gb|ADY66401.1| amidase family protein [Agrobacterium sp. H13-3] Length = 452 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 93/282 (32%), Positives = 138/282 (48%), Gaps = 19/282 (6%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFAT 84 L + + AI S + ++ + A++A A AE + KRI G + L+GIP+ KD F Sbjct: 25 LAEETLDAIGKSEDRA-IFVGLTAERAMAEAEGALKRIREGRSCGVLDGIPVAWKDLFDL 83 Query: 85 KGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 +G T A S +L P ++ V L + G V +G+ NM EFA +YG + Sbjct: 84 EGTVTTAGSTVLSNDAPASRDADVVSALKEAGMVCVGRTNMSEFAFSGLGINPHYG---T 140 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P + PGGSS G+ AVA L +IGTDTGGS+R PA+F G VG K + GR Sbjct: 141 PRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFNGVVGYKASRGRY 200 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 S G+ A SLD G +TRTV+D+ + A+ G DA L G Sbjct: 201 SMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGKAAVDAARTPL-------------SG 247 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +++ +P+ D + + ++Q + L AGA + + P Sbjct: 248 LSLVVPETVFFDGIEEGVAVAFEQAVERLSRAGASVRRQAFP 289 >gi|116750787|ref|YP_847474.1| amidase [Syntrophobacter fumaroxidans MPOB] gi|116699851|gb|ABK19039.1| Amidase [Syntrophobacter fumaroxidans MPOB] Length = 405 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 106/415 (25%), Positives = 190/415 (45%), Gaps = 47/415 (11%) Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 ++ C + +G T+A S L GF ++TV ++L D GA ++G E G + Sbjct: 29 VQACISVQGWPTEAGSAALRGFVAVEDATVVERLRDAGASLVGNTRSCELGFGLLGD--- 85 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G+ AVAG ++ TDT G R A+ G G K Sbjct: 86 ------------------------GAGKAVAGGHVDVALMTDTMGEARAAAASAGVFGFK 121 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+YG+ SR G++ PS+D I+ + + D + AI G D+ D + + P + Sbjct: 122 PSYGQVSRFGLVGLVPSMDCCSILAKRLGDIEDVFTAIRGGDDRDPSLPDPAPPSLSPSA 181 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + ++ G+ + L LS ++ +S L+ G + EI ++ + +I Sbjct: 182 GPGRRPLSAGVVAQC-LHGLSSIERAAFEAALSNLERVGIAVREIPFDKYEFFPVVHNVI 240 Query: 318 SPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 EASS+ ++DGVRYG R G ++ EMY +R+ FG +K Y+ C+ Sbjct: 241 GSVEASSSCGKFDGVRYGHRAAGSRNWNEMYLRSRAESFGLPLK------AYLFQGACFQ 294 Query: 377 ----SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + + +A +IR+ + + VDV+++P ++ + + ++G +Y Sbjct: 295 FEQYAVFEKACRIRSELVGQ-SRRLHGEVDVVVSPARRAAS-----DFGRANTVGQLYEA 348 Query: 433 V-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV-GQIIEKEAG 485 T+ N+ G P +++P + + LGLQL+G PF +E L + G+I+++ G Sbjct: 349 FSLTLPANVTGQPVLTLPGLVTCEGGDLGLQLMGAPFGDELLLGIAGRILQELEG 403 >gi|169615030|ref|XP_001800931.1| hypothetical protein SNOG_10669 [Phaeosphaeria nodorum SN15] gi|111060943|gb|EAT82063.1| hypothetical protein SNOG_10669 [Phaeosphaeria nodorum SN15] Length = 554 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 139/489 (28%), Positives = 219/489 (44%), Gaps = 55/489 (11%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFA 83 E+V S+I IE N+Q NA I + A + A+ D+++ G+A L IPI +KD + Sbjct: 47 EVVSSFIARIEAHNNQTNAII-TLNHNALSIADSLDEQLAAGNAFGPLFCIPILLKDNYD 105 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 T + T + L +P ++ GA++LGK N+ E A+ + +S G I+ Sbjct: 106 TANMPTTGGALALAKSQPLQDAPTVTAFKRAGAIILGKANLHELALEGISVSSLGGQTIN 165 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P+ DST GSSGG+ AAVA C GTDT S+R PAS I+PT G Sbjct: 166 PY---DSTRTPG--GSSGGTGAAVASSFCVIGTGTDTVNSLRSPASANSLCSIRPTKGLI 220 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP----DYERAL 257 +R GII + + D G I R+++D A+ L +A GYD D +P DY +L Sbjct: 221 TRTGIIPISTTQDVIGPIARSIKDVAVALTVMATTGYDAADNETRFVPPENRNIDYAASL 280 Query: 258 DQ-SIQGMTVGIPKEY----RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 S++G+ +G+ + ++P ++ +S L G +V +S Sbjct: 281 SHASLKGLRLGVLNGFFNRSNGSEVTP-VNNAMDTLMSQLTAQGVTLVPVS--------E 331 Query: 313 AYYIISPAEASSNLARYD--------GVRYGLRVEGKDIL-EMYENTRSIGFGQEV---- 359 + Y + +AS ++ RY+ R L E L E+Y S G G E Sbjct: 332 SVYNATAIQASYDVQRYEYRQLMDEYLKRPSLAGEHPATLDELYSRKASNGSGGEFLVLP 391 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + T ++SS ++ R IR L +D I+ P LG Sbjct: 392 SQYEYVNTALVSSTSNATYATRQAGIRNLTLALLNTFASNNLDAIIYPEQKNLVVKLGS- 450 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFREETL 473 + +G G + + G P ++VPA E +P+G++++G+PF EE L Sbjct: 451 PSQTGRNG--------ILAALTGTPVVTVPAGFSEATEDAPIGVPIGMEILGRPFEEEKL 502 Query: 474 FSVGQIIEK 482 +G IE+ Sbjct: 503 LGIGYQIEQ 511 >gi|126445141|ref|YP_001062321.1| amidase [Burkholderia pseudomallei 668] gi|126224632|gb|ABN88137.1| amidase family protein [Burkholderia pseudomallei 668] Length = 484 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 138/484 (28%), Positives = 216/484 (44%), Gaps = 40/484 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDARD-LEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ L G Sbjct: 18 IRRKDVSCVETMRAYLTHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYPGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKER 468 Query: 485 GYFR 488 + R Sbjct: 469 DWVR 472 >gi|237801272|ref|ZP_04589733.1| amidase family protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024131|gb|EGI04188.1| amidase family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 447 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 135/467 (28%), Positives = 206/467 (44%), Gaps = 46/467 (9%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHT 89 + AIE N +NA+ +V A+ A A + G R L GIP GIKD F+T G+ T Sbjct: 6 LSAIETHNPTLNAFGDVYAEAALEQAWILTGEMQRGKIRGPLHGIPFGIKDLFSTAGLRT 65 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 S P ++ + ++L + GA++LGK EF ++ + +G +PW D Sbjct: 66 TRGSLTALDAVPTQDAPIIRRLKNAGAIILGKTATTEFGWTGASISKVFGNGRNPW---D 122 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 T T GGSS GS+ AVA + A++G+D GGS+R P +F G +K T GR Sbjct: 123 PT--LTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIPGAFCGAFALKGTLGRIPTWP-W 179 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 S L AG ITRTVRDSA+L ++G D D + P + DQ + + +G Sbjct: 180 SATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALPAPDESFLARCDQPLPPLRIG-- 237 Query: 270 KEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLA 327 PT+ D ++ + +A + SLP T P + LA Sbjct: 238 -------FCPTLFDTPVDPQVAAVVEAAVANIARSLPVTVSTFDPGW--------QDPLA 282 Query: 328 RYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI 385 ++ + G R GK + + + GF + ++ S+ S YL+A + Sbjct: 283 TFETLWVGGRGIAYGKALSQQLDQLDP-GFAELIRR---------SAHYSLSDYLQALQQ 332 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEENNSGSMGHIYNDVFTVAVN 439 R FE D+++ PT P F P G +S + FT N Sbjct: 333 RAAFANQVHATFED-YDLLIMPTLPILPFAADEVAPAGYPGQDSAVPWARWTP-FTYPFN 390 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +AG PA S+P L +P+GLQ++G F + + +E A + Sbjct: 391 IAGNPAASLPCGLSSTGLPVGLQVVGPRFADALVLQFCAAVEAIAPW 437 >gi|146303538|ref|YP_001190854.1| amidase [Metallosphaera sedula DSM 5348] gi|145701788|gb|ABP94930.1| Amidase [Metallosphaera sedula DSM 5348] Length = 388 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 133/457 (29%), Positives = 203/457 (44%), Gaps = 82/457 (17%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 ++E NSQ NA+I + + R L G+ G+KD T G+ T A Sbjct: 3 MSLERLNSQYNAFITLHEMRGRDGP--------------LTGLTFGVKDVIETSGVRTTA 48 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL P + + ++ G +LGK N EFA+G++N +S GP +P R D Sbjct: 49 GSRILLDNVPKRNALIVDRILSMGGTILGKTNTHEFAVGATNTSSVAGPARNP-RDRDRI 107 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 GSSGGS+ AVA + +GTDTGGS+R PAS G +G KP+YG G+I F Sbjct: 108 SG----GSSGGSAVAVALNMVDVGVGTDTGGSVRIPASLCGVIGFKPSYGLFPMSGVIPF 163 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + SLD G +TR D+E L + + +T P E Sbjct: 164 SWSLDTLGFLTR----------------------------DHE-TLWRVLVALT---PAE 191 Query: 272 YRLDYL-SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD 330 + Y+ SP + G+ D+ ++E ++ + A P N+ RY Sbjct: 192 GKKAYVRSPRTRP--RVGVFLFDDSTKDLLEKAMEYFPQARPVNL--------PNMIRYG 241 Query: 331 GVRYGLRV----EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 R+ RV EG + ++ + +V+ + G LS D Y+ A ++R Sbjct: 242 --RWARRVIATSEGASYHLTWLRSKEEMYFPDVRDILKSG---LSISAVD--YVNALRLR 294 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLP 444 LI ++ F+ VDVIL+PTT P K G D+ T N+ G P Sbjct: 295 KLILEEYMSVFKD-VDVILSPTT---RIPAPKISEVQGREKEFREDLVANTELFNLVGAP 350 Query: 445 AISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQII 480 +IS+P E+ +PLGL + G+P+++ + V + I Sbjct: 351 SISIP--FFERDGLPLGLMISGEPYKDGVVLEVARQI 385 >gi|85705773|ref|ZP_01036870.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Roseovarius sp. 217] gi|85669763|gb|EAQ24627.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Roseovarius sp. 217] Length = 447 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 131/466 (28%), Positives = 208/466 (44%), Gaps = 51/466 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD- 60 +E+ + R RL S +SA++LV++ I IE ++ A+ A AR A+ D Sbjct: 5 AEILMLDACTLRTRLASGALSALDLVEACIARIEAREPEIRAWAWFDADFARMQAKALDT 64 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R L G+P+ +KD T I T+ + G P ++ + +L GAV++G Sbjct: 65 QRQAGRPIGALHGLPVALKDIIDTAKIPTENGCSLDAGRIPTKDAAIVARLKAAGAVIMG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K E A + GP +P + TPGGSS GS+AAVA + ++GT T Sbjct: 125 KTVTTELAY------MHAGPTRNPLNT-----AHTPGGSSSGSAAAVADGMVPLAVGTQT 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+ +PAS+ G G KP++G R G++ +P+LD G+ RT D+A+L + + G+D Sbjct: 174 GGSVIRPASYCGVTGFKPSFGAIPRTGVLIQSPTLDTLGVFARTPADAALLAEVLMGHDA 233 Query: 241 CDATCVNLPVPDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V PVP + V + D P + +++ ++ L G ++ Sbjct: 234 GDPATVPAPVPSLLSVASSTPPLKPVFAFVRPPGWDKADPQLHAAFEELVAAL---GEQV 290 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-GFGQE 358 E LP A+ + A N A +Y Y ++SI G Sbjct: 291 FEAPLPT------AFSEAAEIRARINFAEM--AKY-----------YYRYSKSIDALGPR 331 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + + G L+ YL A ++ E FE+ D IL P T P G Sbjct: 332 TQEALNAGNATLA-----RDYLAALDWADVLYAGLGEIFER-CDAILCPAA-TGPAPEGL 384 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 E I+N ++T + G PA++VPA E +P+G+QL+ Sbjct: 385 EFTGDA----IFNGLWT----LTGTPAVTVPAFTAENGLPMGIQLV 422 >gi|302780489|ref|XP_002972019.1| hypothetical protein SELMODRAFT_172412 [Selaginella moellendorffii] gi|300160318|gb|EFJ26936.1| hypothetical protein SELMODRAFT_172412 [Selaginella moellendorffii] Length = 502 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 140/498 (28%), Positives = 236/498 (47%), Gaps = 42/498 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRIING 66 +V E + RS +++ E+V Y+ I + N +N I++ A A ++ +R + Sbjct: 27 SVEEIQQAFRSGSLTSREIVGFYLDRIVHLNPTLNGVIQLNPDALALADEADAQRRQSSA 86 Query: 67 DARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A+ L GIP+ +KD AT + T A S L G + ++ + +L GA++LGK N+ Sbjct: 87 VAQGLHGIPVLLKDSIATADRMGTTAGSLALLGSKVPRDAGIVARLRRAGAIILGKTNLS 146 Query: 126 EFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E+ S+N TS + + ++ + D+ +P GSS GS+ AVA + + S+GT+T GSI Sbjct: 147 EWMNFRSTNSTSGWSALGGQTKNPYNLDE-SPCGSSSGSAVAVAANMVSVSVGTETDGSI 205 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P+S VGIKPT G SR G+I + + D G + R+V D+ +L AIAG D D Sbjct: 206 LCPSSVNAVVGIKPTVGLTSRAGVIPISHTQDTVGPMCRSVADAVAVLDAIAGADPRDRQ 265 Query: 245 CV----NLPVPDYERALDQ-SIQGMTVGI-PKEY----RLDYLSPTIDKTWQQGISWLKD 294 + +P Y++ L + ++G +GI P + R D ++ +DK IS K Sbjct: 266 TLFISKYIPRGGYKQFLRRDGLRGKRLGIAPVPFFQGIREDEIA-AVDKM----ISIAKS 320 Query: 295 AGAKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 GA IVE ++LPH L + S +L +R +VE L ++ Sbjct: 321 RGAVIVENLTLPHADEIL--------SGVSEDLV----LRTNFKVELNQYLAQLVKSQVR 368 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +K I + + + +L ++ + +D+ EA ++ + LT Sbjct: 369 SLEDVIKFNIQHADKEM--KLFGQEIFLESQATKGTHSKDYKEAVKR--NQFLTKHGIDH 424 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-LCEKKMPLGLQLIGQPFREE 471 F K + G+M + T +AG PAI++PA L +P G+ ++G E Sbjct: 425 LFETHKLDALIGAM----PSLMTAPAAIAGYPAITIPAGYLSSTGVPFGIGILGTKGSEP 480 Query: 472 TLFSVGQIIEKEAGYFRP 489 TL + +E+ +P Sbjct: 481 TLIEIAFDLEQATLVRKP 498 >gi|126456498|ref|YP_001075287.1| amidase [Burkholderia pseudomallei 1106a] gi|167914519|ref|ZP_02501610.1| amidase [Burkholderia pseudomallei 112] gi|242311734|ref|ZP_04810751.1| amidase family protein [Burkholderia pseudomallei 1106b] gi|126230266|gb|ABN93679.1| amidase family protein [Burkholderia pseudomallei 1106a] gi|242134973|gb|EES21376.1| amidase family protein [Burkholderia pseudomallei 1106b] Length = 484 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 216/479 (45%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSLDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 467 >gi|330964732|gb|EGH64992.1| amidase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 506 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 224/492 (45%), Gaps = 51/492 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ ELV +Q IE N+ Q+NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGSLTSAELVQDLLQRIEALNNNGPQLNAVIEVNPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G +++ V ++L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNINTGDKMQTTAGALAMVGSSAPHDAFVVKRLREAGAIIIGK 161 Query: 122 LNMDEFAM--GSSNETSYYG---PVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 N+ E+A G + + + G + P+ S+D P GSS GS+ +A + Sbjct: 162 ANLSEWAFFRGENPPSGWSGRGGQTLHPYNLSVD------PRGSSTGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA G VG++PT G SR G+I D G + RTV D+AI+L A+ Sbjct: 216 LGTETNGSIIQPAQTNGVVGLRPTLGLLSRTGLIPLTRRQDTPGPMARTVTDTAIMLTAM 275 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGIS 290 +G D D V ++ +++G +G P RL + S D +Q+ Sbjct: 276 SGTDPLDDATGQASTYTVNYFDHLSTDALRGKRLGYP---RLTWDDKSMDDDPDFQKAKI 332 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ AGA +V I +P + P + ++ + L Y R GL V D + + NT Sbjct: 333 SLQSAGAILVPIDVPDIDNS-PEFDVML-QDFKRELNAYLNTRPGLEVSTLDDIIAF-NT 389 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 S Q ++I + S+ D YL D A +Q +D ++ Sbjct: 390 ASPS-AQVYDQNLLIQS---SNTPVDPDYLSK-------ANDLRNANQQLIDGLV----- 433 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++++ ++ + F +AG P I+VP + MP GL + + + E Sbjct: 434 --------QQHSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSKAWDE 485 Query: 471 ETLFSVGQIIEK 482 L S +E+ Sbjct: 486 ANLLSYAYALEQ 497 >gi|294084168|ref|YP_003550926.1| amidase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663741|gb|ADE38842.1| Amidase [Candidatus Puniceispirillum marinum IMCC1322] Length = 460 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 137/465 (29%), Positives = 212/465 (45%), Gaps = 47/465 (10%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFA 83 ++VD+++QAIE N+ ++AY V +A AA +DK ++G GIP +KD + Sbjct: 24 KVVDAHLQAIEKHNAHIDAYQTVFFDQAMQAAAAADKAFMSGYRIGPFHGIPFALKDIYD 83 Query: 84 TKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G I T + D P TV ++L G ++LGK E A G G Sbjct: 84 LEGHICTNGSMALKDRVSPK-SGTVVRRLIAAGGIVLGKSKTVESAFGGWGTNQKMG--- 139 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +PW D + PGGSS GS A A L IG+DTGGS+R PA++ G G+K T G+ Sbjct: 140 TPWNPWDLKNHRIPGGSSSGSGVATAAGLAVCGIGSDTGGSVRLPAAYCGITGLKVTEGQ 199 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD----ECDATCVNLPVPDYERALD 258 GI A +LD G +T+TV D+ +L + + G + + D N + L Sbjct: 200 LPCDGIAPLAQTLDSPGPMTQTVTDTVMLYEIMMGREGGAIDDDMRTHN----GLYQMLA 255 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP-AYYII 317 + ++G+ +G + + I + Q I L+ GA I S P +L I Sbjct: 256 KGVRGLKLGQMAQSERANCTADILAGYDQAIDSLQRLGADIEVFSSPFGYASLADDNGAI 315 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 + EA +N +YE+ ++ ++V+ R++ G + Y + Sbjct: 316 TAVEAYNNHG-----------------HLYED-KTAPMDEDVRKRMLTG------KTYLA 351 Query: 378 H-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 H Y+R + R +F EA G D ILTP+ TS P+ + + + S GH FT Sbjct: 352 HEYVRMLETRRQRCVEFNEAIS-GFDAILTPSM-TSTAPIITDVDQAISPGH-----FTR 404 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N + +SVP L MPL LQ+I + E +G +E Sbjct: 405 PFNYLAMCGLSVPTGLASDGMPLSLQIIARAHDEAMAIRIGAAVE 449 >gi|307318184|ref|ZP_07597620.1| Amidase [Sinorhizobium meliloti AK83] gi|306896225|gb|EFN26975.1| Amidase [Sinorhizobium meliloti AK83] Length = 471 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 125/491 (25%), Positives = 213/491 (43%), Gaps = 61/491 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L +++ + +R+++ISAV++ ++ I + + + + A AA + D Sbjct: 1 MTALENLSIRKLAAMVRAREISAVDVTTHFLGRIVAYDDALCGFNVPAPEAALDAAHDLD 60 Query: 61 KRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L GIP+ IKD G+ + S G ++TV ++ G ++L Sbjct: 61 TYLNAGGEAGALAGIPLSIKDTADVAGLPSAGASASRSGRTATADATVVARMKAAGGIVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E A G + + P +PW + D+F PGGSS GS VA LC S+ TD Sbjct: 121 GKANCHELAFGGPSFDLPFPPARNPW----NLDRF-PGGSSSGSGVTVAAGLCLGSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PA+ G G+KP + GI A ++D G + RT D+ IL +AG Sbjct: 176 TAGSIRLPATMCGVFGLKPGHDTLPLDGIAVLAATMDHVGPVARTADDTRILFDVMAGRS 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPK-EYRLDYL-SPTIDKTWQQGISWLKDAGA 297 +S++G+ +G+P+ E+ + L P + I + GA Sbjct: 236 PGSPFV-------------ESLKGLRIGVPENEWDVGRLIHPDVRAAIDGAIEVARSEGA 282 Query: 298 KIVEISLPHTQ-YALPAYYI----ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 IV + LP + + P + ++ A+S A +D Sbjct: 283 DIVPLRLPSLEDFHAPGTVLMMCEVAAEHAASVRAAWD---------------------- 320 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 FG + R ++G + H R A ++R ++++ +A VD +L P Sbjct: 321 -KFGAIFRARALVGEGIA------VHDFRLAERLRPVLRKRLLDAMSN-VDCLLVPGALA 372 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 PL + + + + + N G PA++ PA MP+G+Q++G P E Sbjct: 373 PPGPLASVD----PFYFMKDPIPNIVANYTGFPALAFPAGFGGDGMPVGVQIMGVPRSEH 428 Query: 472 TLFSVGQIIEK 482 L + + E+ Sbjct: 429 RLLDIAESFER 439 >gi|92112287|ref|YP_572215.1| amidase [Chromohalobacter salexigens DSM 3043] gi|91795377|gb|ABE57516.1| Amidase [Chromohalobacter salexigens DSM 3043] Length = 471 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 125/473 (26%), Positives = 207/473 (43%), Gaps = 41/473 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L M + S + S +E + + IE N +NAY+ V + A AA+ S + Sbjct: 4 TDLGMMDAGQLTALFESGEASPLEATRAALSRIERFNDAVNAYVHVDHEGAEQAAKASAR 63 Query: 62 RIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G ++G+P+ +KD G+ + S +++ + L + GA+ LG Sbjct: 64 RWGQGKPLSPIDGMPVSMKDLTEVAGMPARDGSLTSKETPCEHDAPPARMLREAGAIFLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF + + +G +PW + + TPGGSSGG++AA A + G D+ Sbjct: 124 KTNTPEFGWKAVTDNRVFGATYNPWDT-----RLTPGGSSGGAAAAAALNMGVLHQGGDS 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+FTG G KPT+G + + PSL G +TR V D+A +L I YD Sbjct: 179 GGSIRIPAAFTGVFGFKPTFGWTPQWPPAT-EPSLSHIGPLTRNVPDAARMLNVIGRYDY 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D D+ LD ++G+ + + + P I ++ L+ GA++ Sbjct: 238 RDPYATRGQPDDWGVDLDCDLRGLRIAYSPDLGYAQVEPQIAARVREAAEKLQALGAEVE 297 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 EI H + P +A + + + LE++ +RS + + Sbjct: 298 EI---HPGFESP-------------IAIFQQLWFTAS------LEVW--SRSTEHERTLL 333 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 ++ ++ R + RA + R + + E F Q +++TP+ S F E Sbjct: 334 DPGLVANARIAERWSALDFFRALEARARLTQRL-EHFNQKYHLLMTPSVAVSPF----EA 388 Query: 421 NNSGSMGHIYND-----VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 N+ G D F+ N++ PA SVP + MP+G QL G F Sbjct: 389 NHEVPPGSGMQDWEEWAPFSYPFNLSQQPAASVPCGFTDAGMPVGFQLAGGKF 441 >gi|118469939|ref|YP_888347.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] gi|118171226|gb|ABK72122.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] Length = 416 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 126/460 (27%), Positives = 202/460 (43%), Gaps = 69/460 (15%) Query: 37 SNSQMNAYI----EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQAC 92 S ++ NA+ E VA+ RA +++ AR LEGIP G+KD G+ T A Sbjct: 5 SANRFNAWTTIDHEAVARYERARGASAER------ARILEGIPCGVKDNIDVAGLPT-AD 57 Query: 93 SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD 152 P ++ V L GAV++GK M E A G++ S PV++P RS + Sbjct: 58 GSAYPAVVPTRDAQVVLALRAAGAVIVGKNAMHEIAYGATGMVSATAPVVNP-RSAEHMP 116 Query: 153 KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 + GS+ +A F +IGTDTGGS+R PA+ G VG++PT GR G+ + Sbjct: 117 GGSSSGSAAAVAAGDVPF----AIGTDTGGSVRVPAALCGVVGLRPTTGRLQSSGVQPLS 172 Query: 213 PSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY 272 P+LD G++ +V + + AI+G R+ + +T+G+ + Sbjct: 173 PTLDTVGVLAASVGIARAVWHAISGTP--------------YRSPETDDAALTIGVVAD- 217 Query: 273 RLDYLSP---TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 DY P I + + L+ GAK+ + L + A+P Y I EA+ + Sbjct: 218 --DYFVPESTAITEAVSNACASLEQHGAKVRPVRLGWPEAAVPVYAHIVGCEAALTHRK- 274 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 + EN F E + R+ G +R Y+ A + R I Sbjct: 275 ---------------RLSENPPL--FQSETRRRLAAG-----ARTTPHMYVEALRHRARI 312 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV------FTVAVNMAGL 443 D F+ DV+++PTT A + + + +G DV +T ++ G Sbjct: 313 AYDLLRVFDH-CDVLISPTT---AILGPRRDRKTADVGGQSVDVGRALVAYTTPWSLTGA 368 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 PA++VP + PL +QL+G+P E + G I+E + Sbjct: 369 PALAVPVGADQHGRPLSVQLVGKPGCETRVLEAGSIVEAQ 408 >gi|227517400|ref|ZP_03947449.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis TX0104] gi|227075166|gb|EEI13129.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis TX0104] Length = 482 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ + G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKHQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|118488348|gb|ABK95992.1| unknown [Populus trichocarpa] Length = 517 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 136/501 (27%), Positives = 228/501 (45%), Gaps = 64/501 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E + +++ +LV+ Y+ I+ N + + +EV A + + R N Sbjct: 41 IQEIQQAFAQNKLTSKQLVNFYLDRIQELNPLLQSVLEVNPDALEQAGKADEDRERNKGK 100 Query: 69 R---DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R DL GIP+ +KD TK ++T S+ L G ++ V +KL + GAV+LGK ++ Sbjct: 101 RFLGDLHGIPVLLKDSIGTKDKLNTTCGSYALVGSEVARDAHVVEKLRNAGAVILGKASL 160 Query: 125 DEFAMGSSNET-----SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+ S + + G +P+ ++S D P GSS GS+ +VA + A S+GT+ Sbjct: 161 SEWYNCRSFDIPDGWCARGGLAKNPY--VESAD---PCGSSSGSAISVAANMVAVSLGTE 215 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA VG+KPT G SR G+I +P D G TV D+ +L AI G+D Sbjct: 216 TDGSIICPADHNSVVGLKPTVGLTSRAGVIPISPRQDTIG----TVSDAVYVLDAIVGFD 271 Query: 240 ECDATCVN-----LPVPDYERALDQS-IQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWL 292 D+ +P Y++ L + ++G VGI + LD + T+ T+ + L Sbjct: 272 PRDSQATTKAAEFIPAGGYKQFLKKDGLKGKRVGIVRNPFLDSFNDSTVISTFNHHLEVL 331 Query: 293 KDAGAKIVE-ISLPHTQYALPAY----YIISPAEASSNLARY--DGVRYGLRVEGKDILE 345 + GA IV+ + + + L Y I+ AE + +Y + ++ +R DI+ Sbjct: 332 RQGGANIVDNLQIDNIDVILDPYRSGEVIVMLAEFKLTIKQYLEELIKSPVRSLA-DIIA 390 Query: 346 MYENTRSI----GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 N + +GQE+ +L++ + K+ L+++ E FE+ + Sbjct: 391 FNNNNPDLESMSKYGQEL---------LLAAEMTNGLGEEEMKLVKLMEQLSEEGFEKMM 441 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 +EN+ +M + DV TV + + G PA++VPA K P G+ Sbjct: 442 -----------------KENDLDAMLTLGVDVSTV-LAIGGYPALTVPAGYDSKGKPFGI 483 Query: 462 QLIGQPFREETLFSVGQIIEK 482 G E L V E+ Sbjct: 484 CFGGLKGMEPKLIEVAYAFEQ 504 >gi|146278930|ref|YP_001169089.1| amidase [Rhodobacter sphaeroides ATCC 17025] gi|145557171|gb|ABP71784.1| Amidase [Rhodobacter sphaeroides ATCC 17025] Length = 465 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 132/472 (27%), Positives = 209/472 (44%), Gaps = 57/472 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 I VEL ++++ A + Y + ++AR A + +R G R L+G+P+ K Sbjct: 44 IHPVELAEAFLDAASDHPEAPRIYARLTPERARGEAMAAAERAKLGLRRGPLDGVPVSWK 103 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSY 137 D F T GI T+A S +L G RP ++ V G V LGK +M E A N + Sbjct: 104 DLFDTAGILTEAGSLLLKGRRPERDAEVVVTATLQGLVCLGKTHMSELAFSGLGLNPVTA 163 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 P I+ PGGSS G++A+VA L A+IG+DTGGS+R PA++ G+K Sbjct: 164 TPPCIN-------DPAAVPGGSSSGAAASVAFGLAPAAIGSDTGGSVRIPAAWNDLTGLK 216 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 T GR G + A D G + R+V D A+LL A+ G PD A Sbjct: 217 TTAGRVPLGGAVPLAARFDTVGPLARSVEDCALLLAALEGGR----------APDLRGA- 265 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 S+ G + + L+ L + +++ ++ L AGA+I +P A+ + Sbjct: 266 --SLAGARFLVLETVALEDLREAPAQGFEEAVARLARAGARIERGDVPEVAEAM---ALA 320 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 P + G YG E+ E + F + R GT+V ++ Y + Sbjct: 321 GPL--------FTGEAYGTWA------EVIEAAPHLMF-PRILERFRSGTHVTAAD-YVA 364 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--- 434 + + ++R A G D +L PT+P G+ + ++ ++ Sbjct: 365 AWQKLDRLRAAWS-----AKTAGFDAVLVPTSPILPPDAGRLMTDEDY--YVTENLLALR 417 Query: 435 -TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 T N+ GLP +++P + G+ L+GQPFREE L +G E+ G Sbjct: 418 NTRIGNLMGLPVLTLPTG----QPSCGISLMGQPFREERLLRLGAAAERALG 465 >gi|238483869|ref|XP_002373173.1| amidase family protein, putative [Aspergillus flavus NRRL3357] gi|220701223|gb|EED57561.1| amidase family protein, putative [Aspergillus flavus NRRL3357] Length = 510 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 131/522 (25%), Positives = 220/522 (42%), Gaps = 89/522 (17%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRI 63 + + + L + + V + +YI I NS + A + + +A +E + I Sbjct: 17 LTIPQYHSALIHRRTTCVATITAYITRIHQYNSTLKAILAINPNALHEAYQKDQELARGI 76 Query: 64 INGDA-------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 N DA R L G+PI +KD + T + T + L TV Q L NGA Sbjct: 77 DNTDAVNLELALRPLHGVPIILKDTYTTAFLPTTSGVRALRTLTTDTSCTVVQNLLSNGA 136 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++L K N+ EF++ +S G ++P+ D T TPGGSSGG++ A+A + Sbjct: 137 IILAKSNLHEFSLEGITLSSLGGQTLNPY---DLTR--TPGGSSGGTAVALAANMGLVGC 191 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G DT S+R PAS VG +PT G+ SR GI+ + D AG + RTV D IL +A+ Sbjct: 192 GGDTMNSLRSPASACSVVGFRPTRGQVSRKGIVPVTETQDVAGPMGRTVGDVRILFEAMR 251 Query: 237 GYDECDATCVNL---PVPDYERALDQSIQGMTVGIPKEYRLDYLSP---TIDKTWQQGIS 290 G D D +N P + R + +GI K+Y D + T++K ++ Sbjct: 252 GEDAGDPATLNALRRQSPSHTRT-----SKIKLGILKDYFSDGSTAEGLTVNKAIYDALT 306 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L I + +PH +P + ++ + A E + +L+ + N+ Sbjct: 307 RLGSNSPSIDLVEIPH----MPDWDVLLLRTKADTQA----------YEFRTVLDAFLNS 352 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 +++ HR + + +S Y+ + A +TL +F TPT+P Sbjct: 353 QTV----TTPHRSLAA--IAASGQYNPQAMTAVFDQTLQGDEF------------TPTSP 394 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAV-------------------------NMAGLPA 445 L + GS+ + + A+ + G PA Sbjct: 395 EYYSRLEMIGSLKGSVERCFQEHGLTALVYPHQRQLVASVGCTVQPGRNGILAALTGRPA 454 Query: 446 ISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIE 481 I PA + +P+G++L+GQP++++ L + Q E Sbjct: 455 ICFPAGFSPETPSAPLGIPIGIELMGQPWKDQELLDLAQKFE 496 >gi|154251760|ref|YP_001412584.1| amidase [Parvibaculum lavamentivorans DS-1] gi|154155710|gb|ABS62927.1| Amidase [Parvibaculum lavamentivorans DS-1] Length = 451 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 124/416 (29%), Positives = 179/416 (43%), Gaps = 42/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+P+ KD F T G T A S L P ++ V + GAV LGK M E A Sbjct: 71 LDGVPLSWKDLFDTAGAATAAGSLPLKDRVPARDAEVLARATRAGAVCLGKTTMTEIAFS 130 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +G +P + D + PGGSS G++ +VA L A +IGTDTGGS+R PA++ Sbjct: 131 GLGINPKFG---TPANACDEKIERVPGGSSAGAAVSVARDLAAGAIGTDTGGSVRIPAAW 187 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+K T G G + +P+ D G + + V D+A + + G A + P Sbjct: 188 NGLVGLKTTSGSLPLTGTVPLSPTFDTVGPLAKDVEDAAAMFALLEGK---QARAIE-PF 243 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D RA+ +P L + + I L AGA+IVE LP Sbjct: 244 -DLSRAVFM--------LPGGIGWSELEEGVAAALEGAIRRLVHAGARIVEHPLPE---- 290 Query: 311 LPAYYIISPAEASSNLARYDGVRYG--LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 L + ++ S L ++G L+ DI Q V+ R+M G Sbjct: 291 LDEVHRLAWDPKGSRLVADAYAQWGEMLQANANDIY------------QPVRDRVMAG-- 336 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 R +RA R I+ + A G D +L PT S P+ + + G Sbjct: 337 ---ERLMAGDIIRADMERADIRARYLAA-TAGADAVLMPTVAISPPPIAALIDGGEAYGK 392 Query: 429 IYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T N GL A+++PA + +P+GL L PF EE L VG+ +EK Sbjct: 393 ANRMALRNTTMGNQLGLCAMTLPAGYDGQGLPVGLMLQAAPFTEEKLLRVGRAVEK 448 >gi|90422647|ref|YP_531017.1| allophanate hydrolase [Rhodopseudomonas palustris BisB18] gi|90104661|gb|ABD86698.1| Amidase [Rhodopseudomonas palustris BisB18] Length = 597 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 124/418 (29%), Positives = 197/418 (47%), Gaps = 38/418 (9%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+P+ IKD G+ T A F+P ++TV KL GA+++GK N+D+F Sbjct: 62 ALPLFGVPVAIKDNIDVLGLPTTAACPAF-AFQPARDATVVAKLRAAGAIVIGKTNLDQF 120 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G S YG P +M D PGGSS GS+ AV+ L ++GTDT GS R P Sbjct: 121 ATGLVGVRSPYG---VPRNAM--RDDLVPGGSSSGSAVAVSAGLVPLALGTDTAGSGRVP 175 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KPT G S G++ +LD I TV D+AI L+A+AGYDE DA Sbjct: 176 AMLNNIVGLKPTLGLISTAGVLPACRTLDCVSIFALTVDDAAIALQALAGYDEADAYSRK 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL-P 305 LP+P + + +G+P+ +L + ++ +Q + G VE L P Sbjct: 236 LPLPQH----GPFAAPLRLGVPRAGQLQFFGDAQSERDYQAALQRFVALGCTPVEFDLAP 291 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + A Y E RY +R L+ + Y TR I I Sbjct: 292 FDETAKLLY------EGPWVAERYLVIRELLQSNPDAV---YPVTRGI---------IEA 333 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G V + + + Y +++ L +R + FEQ +D +L PT PT A+ + + + + Sbjct: 334 GANVTGADSFAALY----RLQALRQRS-AKTFEQ-IDAMLLPTAPT-AYTVAELAADPVT 386 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + ++T VN+ L +++P+ + + +P G+ L+ ++ L +G++ + Sbjct: 387 LNSRLG-IYTNFVNLLDLCGLALPSTIRDDGIPFGVTLLAPAGQDARLAGLGRLFHAD 443 >gi|187922164|ref|YP_001893806.1| amidase [Burkholderia phytofirmans PsJN] gi|187713358|gb|ACD14582.1| Amidase [Burkholderia phytofirmans PsJN] Length = 474 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 129/480 (26%), Positives = 205/480 (42%), Gaps = 55/480 (11%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NGDARDLEGIP 75 +S S VE+ + + IE + +NA+ ++ A A A S+KR N L+G+P Sbjct: 18 KSGATSPVEVTQAVLTRIERLDPAVNAFCQI-APDALDMARASEKRWKGNRPLGPLDGVP 76 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD A G+ T+ S + D ++S +L ++GA+ K + +FA ++ Sbjct: 77 ISVKDNVAVAGLATRYGSRVTDETPSPHDSPSVARLRESGALCFAKTTLPDFAHKIVTDS 136 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 G +PW + TPGGSSGG++ AV+ + A+IGTD GGSIR PA+FTGT G Sbjct: 137 PLTGITRNPWDT-----SRTPGGSSGGAAVAVSLGMAPAAIGTDGGGSIRIPAAFTGTFG 191 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP++GR F L G +TR V D+A +L I+ D D + DYE Sbjct: 192 FKPSFGRVPHAPRGPFG-LLSHIGPMTRCVADAARILTVISRPDSRDWYALPHDGSDYEL 250 Query: 256 ALDQSIQGMTVGIPKEYRLDY-LSP--TIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L V I L ++P ++ Q+ +D GAK+ + P Sbjct: 251 GLKCKPTPGGVRIAYSPSLGLAVTPEASVLDAVQRAADIFRDLGAKVQQEDPPGIVRCNA 310 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDI---LEMYENTRSIGFGQEVKHRIMIGTYV 369 + + PA + G+ G + L+ Y + G + + ++G Sbjct: 311 VHATLWPACCRQ-------LTEGMADAGAALDPSLQAYSDA-----GAAISRQALLG--- 355 Query: 370 LSSRCYDSHYLRARKIRTLIKRD----FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 LI+R AF + D+++ P A PL + N Sbjct: 356 -----------------ALIERGELGAAINAFFERYDLVICPVYTRVAMPLAELAANHEL 398 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 H FT N GLPA S+ A + +P+G+Q++G + + I+E G Sbjct: 399 FPH-----FTAWCNQLGLPAASIYAGTTPEGLPVGVQIVGGRHADALVLWASHILELAFG 453 >gi|257417130|ref|ZP_05594124.1| amidase [Enterococcus faecalis AR01/DG] gi|257158958|gb|EEU88918.1| amidase [Enterococcus faecalis ARO1/DG] Length = 482 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 131/515 (25%), Positives = 223/515 (43%), Gaps = 78/515 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P+ +++ + Q + + + + +SP + +Q +L AG +I+EI Sbjct: 229 APYQAPLAEWQTHTKK--QRLKIALCTASPIGSMISPEATQAAKQAADFLAAAGHEIIEI 286 Query: 303 SLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVK 360 P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 287 PYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ--- 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 +I TYV S + +D + E Q D+ L+PTT SA + ++ Sbjct: 340 -KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSAPKINEDL 386 Query: 420 -------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAISVPAALCEKKM 457 E + + D F T N+ G PAIS+P + + Sbjct: 387 QSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTATGL 446 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 447 PLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|67643259|ref|ZP_00442006.1| amidase family protein [Burkholderia mallei GB8 horse 4] gi|121597821|ref|YP_989913.1| amidase [Burkholderia mallei SAVP1] gi|124381856|ref|YP_001024394.1| amidase [Burkholderia mallei NCTC 10229] gi|126447862|ref|YP_001078181.1| amidase [Burkholderia mallei NCTC 10247] gi|167000201|ref|ZP_02266021.1| amidase family protein [Burkholderia mallei PRL-20] gi|167723264|ref|ZP_02406500.1| amidase [Burkholderia pseudomallei DM98] gi|167742233|ref|ZP_02415007.1| amidase [Burkholderia pseudomallei 14] gi|167827780|ref|ZP_02459251.1| amidase [Burkholderia pseudomallei 9] gi|167849254|ref|ZP_02474762.1| amidase [Burkholderia pseudomallei B7210] gi|167897856|ref|ZP_02485258.1| amidase [Burkholderia pseudomallei 7894] gi|167906197|ref|ZP_02493402.1| amidase [Burkholderia pseudomallei NCTC 13177] gi|167922414|ref|ZP_02509505.1| amidase [Burkholderia pseudomallei BCC215] gi|217419068|ref|ZP_03450575.1| amidase family protein [Burkholderia pseudomallei 576] gi|226197649|ref|ZP_03793224.1| amidase family protein [Burkholderia pseudomallei Pakistan 9] gi|254174635|ref|ZP_04881297.1| amidase family protein [Burkholderia mallei ATCC 10399] gi|254190001|ref|ZP_04896510.1| amidase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254200778|ref|ZP_04907143.1| amidase family protein [Burkholderia mallei FMH] gi|254204750|ref|ZP_04911103.1| amidase family protein [Burkholderia mallei JHU] gi|254263607|ref|ZP_04954472.1| amidase family protein [Burkholderia pseudomallei 1710a] gi|254356998|ref|ZP_04973273.1| amidase family protein [Burkholderia mallei 2002721280] gi|121225619|gb|ABM49150.1| amidase family protein [Burkholderia mallei SAVP1] gi|124289876|gb|ABM99145.1| amidase family protein [Burkholderia mallei NCTC 10229] gi|126240716|gb|ABO03828.1| amidase family protein [Burkholderia mallei NCTC 10247] gi|147748390|gb|EDK55465.1| amidase family protein [Burkholderia mallei FMH] gi|147754336|gb|EDK61400.1| amidase family protein [Burkholderia mallei JHU] gi|148026025|gb|EDK84148.1| amidase family protein [Burkholderia mallei 2002721280] gi|157937678|gb|EDO93348.1| amidase family protein [Burkholderia pseudomallei Pasteur 52237] gi|160695681|gb|EDP85651.1| amidase family protein [Burkholderia mallei ATCC 10399] gi|217398372|gb|EEC38387.1| amidase family protein [Burkholderia pseudomallei 576] gi|225930258|gb|EEH26270.1| amidase family protein [Burkholderia pseudomallei Pakistan 9] gi|238524566|gb|EEP87998.1| amidase family protein [Burkholderia mallei GB8 horse 4] gi|243063851|gb|EES46037.1| amidase family protein [Burkholderia mallei PRL-20] gi|254214609|gb|EET03994.1| amidase family protein [Burkholderia pseudomallei 1710a] Length = 484 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 467 >gi|184158170|ref|YP_001846509.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter baumannii ACICU] gi|183209764|gb|ACC57162.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter baumannii ACICU] gi|322508489|gb|ADX03943.1| Putative amidase [Acinetobacter baumannii 1656-2] gi|323518110|gb|ADX92491.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter baumannii TCDC-AB0715] Length = 486 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 212/485 (43%), Gaps = 51/485 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 + + +S ELV Y IE + +NA+I A A+ DK +++G L GI Sbjct: 28 IHERKVSCEELVHHYFDTIEKQQA-LNAFISTDKASAIQQAQYWDKYLLSGKPCPALMGI 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD G A + L F+P + V QKL D GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVAGFPNSAGTPALAHFKPQTSAPVIQKLIDQGAIIVGKANMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ +++ GGSS GS+ AVA + ++GTDTG SIR P++ G Sbjct: 147 NTAMHIEGVVGTRNAVNPL--HIAGGSSSGSAVAVAVGMVPIAMGTDTGASIRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG +PT GR S+ GI + + D AG I TV D IL+ + + P Sbjct: 205 CVGFRPTVGRYSQEGITPISHTRDTAGPIAHTVSD-VILIDELITQE-----------PR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 E I+ +GI Y ++L + + + LK AG +I+ + +P+ + Sbjct: 253 KESLQSHQIR---LGI-NSYFWNHLDEDVHEQAHIALELLKSAGVEIIPVDMPNLEQLNQ 308 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKD------ILEMYENTRSIGFGQEVKHRIM-- 364 A S +A Y+G +Y L KD I + + S K I+ Sbjct: 309 AI--------SFPVAIYEG-KYDLIQYLKDHHVNLTIETVVDQISSPDVQAIFKLNILPE 359 Query: 365 -----IGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 G V Y+ AR ++ L + F + +L PT+P A PL Sbjct: 360 LIQDQTGQLVPVLPSYEKAISEARPQLLELYQNTFK---THNLHALLFPTSPIVA-PLAN 415 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVG 477 EE S N+ G+P +S+P + K+P+GL++ G ++ L ++G Sbjct: 416 EEVYSIETFQTLMRNTDPGSNI-GIPGLSLPIGKGVKSKLPVGLEIDGLAHQDSELLAIG 474 Query: 478 QIIEK 482 +E+ Sbjct: 475 ITLEE 479 >gi|302899887|ref|XP_003048149.1| hypothetical protein NECHADRAFT_40299 [Nectria haematococca mpVI 77-13-4] gi|256729081|gb|EEU42436.1| hypothetical protein NECHADRAFT_40299 [Nectria haematococca mpVI 77-13-4] Length = 442 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 128/490 (26%), Positives = 212/490 (43%), Gaps = 75/490 (15%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI----EVVAQKARAAAE 57 S L + +E + L++ I+ E S + I+ ++ + A+ ++V +ARA + Sbjct: 3 SSLYKLTATEVLELLKNNTITVEEYARSLLDRIQENDGTVKAWAHLDPDLVLSQARALDQ 62 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 I D R L G+ IG+KD TK + TQ S I G +P +S+ L GA Sbjct: 63 ------IPEDQRGPLHGLAIGVKDIMDTKDMPTQYGSPIYKGHQPGSDSSAVAILRAAGA 116 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++ GK EFA+ +S P + TPGGSS GS+AAVA F S+ Sbjct: 117 LIFGKTTTTEFAVINSG----------PETTNPHDPSRTPGGSSCGSAAAVADFQVTLSL 166 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G TGGS+ +PAS+TG +KPT+ S G +P+ D G R++ D +L A Sbjct: 167 GAQTGGSLIRPASYTGVFAMKPTFNAISTAGSKPISPTFDTLGFFARSIEDLQLLADVFA 226 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 +D+ E D + ++V + K P +Q + L+ Sbjct: 227 LHDD-------------EPPRDIPLDEISVALIKTPMWSSAGPGTVSAMKQAAAILQKNN 273 Query: 297 AKIVEISLPHTQYALPAYY-----IISPAEAS-SNLARYDGVRYGLRVEGKDILEMYENT 350 ++ +ISL H + +I+ EA S L Y + L VE ++I+E N Sbjct: 274 VQVEKISL-HPEVGDVETLSRIQNVITQGEAQVSFLKEYRVDKANLAVEIREIVENTSNH 332 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 H+ M + C + Y + R + + +T VILTP+ Sbjct: 333 ---------THQEM------TEAC--TTYSKMRDMVNKVAEHYT--------VILTPSAV 367 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 A PLG ++ S + ++ + +P I++PA + MP+G+ L+ FR+ Sbjct: 368 DEA-PLGLDDMGSPTFNTLWTGLH--------MPVINIPAFVGANDMPVGISLVSPRFRD 418 Query: 471 ETLFSVGQII 480 + L +++ Sbjct: 419 QQLLKTAKVL 428 >gi|317035085|ref|XP_001401053.2| amidase [Aspergillus niger CBS 513.88] Length = 526 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 161/314 (51%), Gaps = 42/314 (13%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-L 71 +D L+ K ++V+LV ++I I + Q +E+ A + A++ D+ G R L Sbjct: 31 QDGLKKKCFNSVDLVKAHIARISEIDVQFGTILEL-NPDALSIAKQLDRERDQGYIRGPL 89 Query: 72 EGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 G+P+ +KD TK + T A S L G + +STV KL DNG V+LGK +M E+A Sbjct: 90 HGLPVLLKDMIGTKDKMQTAAGSWALVGAKVPADSTVAAKLRDNGLVILGKTSMSEWAN- 148 Query: 131 SSNETSYYGPVISPWRSMDSTDKFT---------------PGGSSGGSSAAVAGFLCAAS 175 +RS++S++ + P GSS GS+ A L + Sbjct: 149 --------------FRSVNSSNGWNARRGYTFGAYYPDQDPNGSSSGSAVATDLGLTIFA 194 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI P+ VGIKPT G SR +I + D G + RTV+D+AILL+AI Sbjct: 195 LGTETSGSILLPSERNNIVGIKPTVGLTSRYMVIPLSERQDTIGPLARTVKDAAILLQAI 254 Query: 236 AGYDECD----ATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPT---IDKTWQQ 287 +G D+ D A+ +PDY A S +QG +GIP+ ++YL P I +++ Sbjct: 255 SGPDDKDNYTSASPFAAKLPDYLAACKPSGLQGKRIGIPRNV-IEYLGPAGAPIVAAFEK 313 Query: 288 GISWLKDAGAKIVE 301 ++ + AGA +V+ Sbjct: 314 AVTVISAAGATVVD 327 >gi|167819409|ref|ZP_02451089.1| amidase [Burkholderia pseudomallei 91] Length = 484 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLAHIERVNTDVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 467 >gi|53717114|ref|YP_105936.1| amidase [Burkholderia mallei ATCC 23344] gi|52423084|gb|AAU46654.1| amidase family protein [Burkholderia mallei ATCC 23344] Length = 497 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 31 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 90 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 91 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 150 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 151 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 205 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 206 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 265 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 266 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 319 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 320 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 367 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 368 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 421 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 422 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 480 >gi|312137866|ref|YP_004005202.1| amidase [Rhodococcus equi 103S] gi|311887205|emb|CBH46514.1| putative secreted amidase [Rhodococcus equi 103S] Length = 571 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 138/492 (28%), Positives = 227/492 (46%), Gaps = 56/492 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +++ + E+ LRS + EL+D+ + + ++ +I + + A AA+ + Sbjct: 61 VTDPALLGAVEAASLLRSGRLHPRELLDACLSRSAALDGEIGGWIRIYPEMAYEAADAAA 120 Query: 61 KRI------INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 +R+ NGDA + GIP+ +KD FA G+ A S +L G +STV ++L D Sbjct: 121 QRLSAKSRSTNGDAPLVCGIPLALKDLFAVSGLPLTASSRVLAGNIAAGDSTVWRQLRDA 180 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G V++G + DEFA+G + E V +PW + +F+PGGSSGGS+A +A Sbjct: 181 GMVLMGHAHTDEFAIGVATEQ-----VGNPWNT-----EFSPGGSSGGSAALLAARFVPL 230 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + GTDTGGS+R PAS G IKPT+GRCS G+I + D G + R++ D+++LL Sbjct: 231 ATGTDTGGSLRLPASACGITSIKPTFGRCSAYGVIPLTWTRDHPGPMARSIADASLLLGH 290 Query: 235 IAGYD-ECDATCVNLPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 +AG D AT VP L Q + G G+ + D L T+ + + Sbjct: 291 MAGADPNFPATYAAPAVPAEGYPLAATGGAQPLAGKRFGVARR-SADALPATLGTLFGEF 349 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + ++ G ++++SLP A P AE S ++ D L Y Sbjct: 350 LDLVRRLGGTVLDVSLP---IAAPDLLTGDSAEMGSYHRQF-----------SDRLGDYR 395 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTP 407 + G V + L++ D Y+ + + R + + D+ F + +D +L P Sbjct: 396 ----LDNGATVAGTLA----ALAAPSID--YMTSARNRMVYQHDYNRMFADNDLDAVLVP 445 Query: 408 TTPTSAFPLGKEENNSG--SMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLI 464 + K +G G DV N+ G P + PA +P G+Q+ Sbjct: 446 GSKMDG---AKRIEIAGVSVFGGTTGDVRW--ANLTGTPVVCTPAGRSSATGLPFGVQIG 500 Query: 465 GQPFREETLFSV 476 G+P+ E+ L + Sbjct: 501 GRPWDEKGLIEI 512 >gi|108864044|gb|ABA91618.2| Amidase family protein, expressed [Oryza sativa Japonica Group] gi|222615590|gb|EEE51722.1| hypothetical protein OsJ_33114 [Oryza sativa Japonica Group] Length = 610 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 129/491 (26%), Positives = 227/491 (46%), Gaps = 50/491 (10%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +I+ V + ++ A++ + M +I Q AE S R G ++G Sbjct: 147 SGEITPVMVARRFLAAVKECSGPDLNMALFISCNPQDVIRQAEASTLRYQQGAPLSAMDG 206 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + + +KD T + L RP + + V +L GAV+ GK NM E G+S Sbjct: 207 VLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGTS 266 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G +P+ +T K G S G ++ AG LC ++G D GGS+R PA+ G Sbjct: 267 GINPHHGSTRNPY----NTGKVAGGSSGGSAAVVCAG-LCPVALGADGGGSVRMPAALCG 321 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPT GR S+ G++ ++ GI+ TV D+ I AIA D+ + + P+ Sbjct: 322 VVGLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAAIA--DQSQPSHLQ---PE 376 Query: 253 YERALDQSIQGM-TVGIPKEYR-LDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQY 309 L ++ M T+ + + + + S I + + L+ G + ++++P + Sbjct: 377 LNLPLLKAASSMPTIRLARYAKWFNDCSEDIRSCCYKAVHTLRTRYGWETADVTIPEIEE 436 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY- 368 A+Y+ +E +++ +Y L+ K + G +V RI + Y Sbjct: 437 MRLAHYVTMGSECTASFDKY------LKKLSKSEI-----------GWDV--RIALSAYG 477 Query: 369 VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 SSR Y +S +R R++ F + + DVI+TP T +A L ++G + Sbjct: 478 SFSSRAYLNSQRIRNRQMY------FHDKIFETFDVIVTPMTGVTAHELQDNAGHTGELD 531 Query: 428 HIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +I +++A N GLPAI+V + +P+GLQ IG+P+ E TL + +++ Sbjct: 532 YINGAALVRYSIAGNFLGLPAITVKVGYDREGLPVGLQFIGRPWSEATLLHLAYAMQEAC 591 Query: 485 G--YFRPHKWW 493 G Y +P ++ Sbjct: 592 GKNYRKPMVYY 602 >gi|254192988|ref|ZP_04899423.1| amidase family protein [Burkholderia pseudomallei S13] gi|169649742|gb|EDS82435.1| amidase family protein [Burkholderia pseudomallei S13] Length = 546 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 216/479 (45%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 80 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 139 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 140 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 199 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 200 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 254 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 255 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 314 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + + L+ G I + +LP A Sbjct: 315 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSLDTLRAIGCDI-DAALP----A 368 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 369 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 416 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 417 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 470 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 471 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 529 >gi|170691736|ref|ZP_02882900.1| Amidase [Burkholderia graminis C4D1M] gi|170143020|gb|EDT11184.1| Amidase [Burkholderia graminis C4D1M] Length = 441 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 128/480 (26%), Positives = 203/480 (42%), Gaps = 59/480 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E R L + D + + V +A +S + ++A+ + + ++ A Sbjct: 10 IGEIRAALAAGDATPAQYVSDAYEAARHSQATLHAFCYL--------PDTPPDTFVDATA 61 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ +KD T + T+ S G RP ++ V +L GA ++GK EFA Sbjct: 62 -PLAGVPVAVKDVIDTADMPTEFNSAAYKGRRPERDAWVVARLRAAGATVIGKTVTTEFA 120 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + GP ++PW FTPGGSS GS+AAVA + ++GT T GS+ +PA Sbjct: 121 W------RHPGPTVNPWNG-----AFTPGGSSSGSAAAVAAGIVPLALGTQTQGSVIRPA 169 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ G VG KPTYG +R G++ A SLD G+ R V D A +LK +AG D D Sbjct: 170 AYCGIVGFKPTYGTIARTGVLPLAWSLDHVGLFARRVADVAYVLKLVAGVDVAD------ 223 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + A+ S +G+ + + P + L GA+IV + LP Sbjct: 224 PHASHVAAVAHSAGKRRIGVLSKQAGGAIEPAQQAALDVLAAQLARDGAEIVAVDLPEEV 283 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +A PAY A +A + +G E+ E T E+ M G Sbjct: 284 FATPAY-------ALQLMAVEAAITHG---------ELVERT------PELVSPAMRGLV 321 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG--VDVILTPTTPTSAFPLGKEENNSGSM 426 + + Y R + + + + F Q +D +L T P G + S Sbjct: 322 DEGRKLPATTYARIKAAQMPMAQRFHAWLTQTMTLDALLVAPA-TGEPPRGLDYTGDAS- 379 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 F G+PA++VP +PLG QL+G L ++ + +E G+ Sbjct: 380 -------FCAPWTFLGVPAVTVPMRFGPSGLPLGAQLVGAAQNGAGLLALAEWVEARTGW 432 >gi|257080606|ref|ZP_05574967.1| amidase [Enterococcus faecalis E1Sol] gi|257420539|ref|ZP_05597529.1| amidase [Enterococcus faecalis X98] gi|256988636|gb|EEU75938.1| amidase [Enterococcus faecalis E1Sol] gi|257162363|gb|EEU92323.1| amidase [Enterococcus faecalis X98] gi|315154802|gb|EFT98818.1| amidase [Enterococcus faecalis TX0043] Length = 482 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 133/516 (25%), Positives = 223/516 (43%), Gaps = 80/516 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPAHNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYE-RALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P+ +++ Q ++ + P R+ SP + +Q +L AG +I+E Sbjct: 229 APYQAPLAEWQTHTKKQRLKIALCTASPIGSRI---SPEATQAAKQAADFLAAAGHEIIE 285 Query: 302 ISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEV 359 I P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 286 IPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ-- 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +I TYV S + +D + E Q D+ L+PTT SA + ++ Sbjct: 340 --KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSAPKINED 385 Query: 420 --------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAISVPAALCEKK 456 E + + D F T N+ G PAIS+P + Sbjct: 386 LQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTATG 445 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 446 LPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|297611309|ref|NP_001065856.2| Os11g0170000 [Oryza sativa Japonica Group] gi|255679826|dbj|BAF27701.2| Os11g0170000 [Oryza sativa Japonica Group] Length = 637 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 127/491 (25%), Positives = 224/491 (45%), Gaps = 50/491 (10%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +I+ V + ++ A++ + M +I Q AE S R G ++G Sbjct: 174 SGEITPVMVARRFLAAVKECSGPDLNMALFISCNPQDVIRQAEASTLRYQQGAPLSAMDG 233 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + + +KD T + L RP + + V +L GAV+ GK NM E G+S Sbjct: 234 VLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGTS 293 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G +P+ +T K G S G ++ AG LC ++G D GGS+R PA+ G Sbjct: 294 GINPHHGSTRNPY----NTGKVAGGSSGGSAAVVCAG-LCPVALGADGGGSVRMPAALCG 348 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPT GR S+ G++ ++ GI+ TV D+ I AIA D+ + + P+ Sbjct: 349 VVGLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAAIA--DQSQPSHLQ---PE 403 Query: 253 YERALDQSIQGM-TVGIPKEYR-LDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQY 309 L ++ M T+ + + + + S I + + L+ G + ++++P + Sbjct: 404 LNLPLLKAASSMPTIRLARYAKWFNDCSEDIRSCCYKAVHTLRTRYGWETADVTIPEIEE 463 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY- 368 A+Y+ +E +++ +Y + G +V RI + Y Sbjct: 464 MRLAHYVTMGSECTASFDKY-----------------LKKLSKSEIGWDV--RIALSAYG 504 Query: 369 VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 SSR Y +S +R R++ F + + DVI+TP T +A L ++G + Sbjct: 505 SFSSRAYLNSQRIRNRQMY------FHDKIFETFDVIVTPMTGVTAHELQDNAGHTGELD 558 Query: 428 HIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +I +++A N GLPAI+V + +P+GLQ IG+P+ E TL + +++ Sbjct: 559 YINGAALVRYSIAGNFLGLPAITVKVGYDREGLPVGLQFIGRPWSEATLLHLAYAMQEAC 618 Query: 485 G--YFRPHKWW 493 G Y +P ++ Sbjct: 619 GKNYRKPMVYY 629 >gi|27379414|ref|NP_770943.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27352565|dbj|BAC49568.1| bll4303 [Bradyrhizobium japonicum USDA 110] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 138/497 (27%), Positives = 223/497 (44%), Gaps = 50/497 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L + E R L ++ IS VEL+++ + I N +NA + + AR AA++++ Sbjct: 1 MSGLCDSSAVELRRLLAARAISPVELLEACLSRIATINPAVNAVVTLDEPGARTAAKKAE 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I+ G+ R L G+P+ IKD T G+ + S +L P + +L GA++ Sbjct: 61 AAILRGEDRGALHGLPVLIKDTQDTAGLRSTYGSPLLRDNVPVADQGSVARLRAAGAIIF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E+A G + +G +P+ M S SSGGS+ A+A + + G+D Sbjct: 121 GKTNTPEWAAGGNTRNPVFGATGNPFDPMRSAAG-----SSGGSAVALACGMAPLASGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA F+G VG++P+YG + +L G + R V D+A++L +A D Sbjct: 176 TGGSLRNPAGFSGIVGMRPSYGLVASEKRAFGWSNLSTDGPMARNVADTALMLSVMASDD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAK 298 D LP G P R + + +P + +++ +D G Sbjct: 236 VRDPLAYTLP-----------------GEPVRSRAERWAAPRPADLGKLRLAFTEDFGFA 278 Query: 299 IVEISLPHT---QYALPAYYIISPAEASSNLARYDG----VRYG--LRVEGKDILEMYEN 349 E ++ + A A EA+ + + D +R G L + GK+ E E Sbjct: 279 PTEQAIRRVFRDRVARLAPLFADCREATPDCSGADDAFAVLRAGLFLAMHGKNYKERPEM 338 Query: 350 TRSIGFGQEVKHRIMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 G V+ + G +Y L + RA +T I R + FE DV+++PT Sbjct: 339 -----LGPNVRANVEEGLSYTL------EDHGRAATTQTRIYRAYQTFFET-CDVLISPT 386 Query: 409 TPTSAFPLGK----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 S P + E + + + + AV + G PAIS+P L E +P GLQ++ Sbjct: 387 ITLSPRPWSELYPAEIDGVPTKSYFHWLALAYAVTLPGHPAISIPLGLDEAGLPFGLQIV 446 Query: 465 GQPFREETLFSVGQIIE 481 G + + SV IE Sbjct: 447 GPRGGDAVVLSVAASIE 463 >gi|255974384|ref|ZP_05424970.1| amidase [Enterococcus faecalis T2] gi|255967256|gb|EET97878.1| amidase [Enterococcus faecalis T2] Length = 482 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMISPEATLAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHITAAGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|229546290|ref|ZP_04435015.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis TX1322] gi|229308607|gb|EEN74594.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Enterococcus faecalis TX1322] Length = 482 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +QKA A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKLNGFVTFDSQKAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YG +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGTARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|90423196|ref|YP_531566.1| amidase [Rhodopseudomonas palustris BisB18] gi|90105210|gb|ABD87247.1| Amidase [Rhodopseudomonas palustris BisB18] Length = 449 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 131/469 (27%), Positives = 207/469 (44%), Gaps = 53/469 (11%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEV-VAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 SA +LVD + AI++ N + A++ V A AA R N GIP+ IK Sbjct: 20 SARKLVDQCLAAIQDPNGEGARAFVRVDAAAAIAAAEAMDALRKANAAPSAFAGIPVSIK 79 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNMDEFAMGSSNETSYY 138 D F KG T+A S LD P G V++G+ NM EFA +Y Sbjct: 80 DLFDIKGQVTRAGSRALDDNPPAEADAAAVARLRRAGFVVIGRTNMTEFAYSGIGINPHY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G S W+ PGGSS G++ +VA + ++GTDTGGS R PA+F G VG KP Sbjct: 140 GTPKSTWQR---DVGHVPGGSSAGAAVSVADGMAHGALGTDTGGSCRIPAAFNGVVGFKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T R G + +P+LD G + R+V+ A L DA + P+ + Sbjct: 197 TQARVPLDGAVPLSPTLDSIGPLARSVQCCATL----------DAVLADQPLTTLQ---S 243 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + ++GM + +P LD L + + +++ + L AGA I I A+P + ++ Sbjct: 244 RPVRGMRLAVPTTVALDDLDDAVAQAFERALETLSRAGAWIERI-------AVPEFLDVA 296 Query: 319 PAEASSNLARYDGV---RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 P A + RY L V D+ + V+ RI+ G ++ Sbjct: 297 PMSAKGGFTAAESFAWHRY-LIVANGDV-----------YDPRVRDRIIRGETQSAADYI 344 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGHIYNDVF 434 D + ARK +L+ R T+ D I+ PTT + + ++ + + ++ Sbjct: 345 D--LINARK--SLVAR-ATQRLSP-YDAIVLPTTANTPPKIADLADDKAFTKANLLALRN 398 Query: 435 TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 +NM AIS+P C + ++P+GL L G ++ +F + +E Sbjct: 399 CTLINMIDGCAISLP---CHRDGEVPVGLMLAGSAGTDQRIFELAAGME 444 >gi|53721935|ref|YP_110920.1| amidase [Burkholderia pseudomallei K96243] gi|52212349|emb|CAH38373.1| putative amidase [Burkholderia pseudomallei K96243] Length = 497 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 31 IRRKDVSCVETMRAYLAHIERVNTDVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 90 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 91 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 150 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 151 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 205 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 206 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 265 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 266 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 319 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 320 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 367 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 368 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 421 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 422 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 480 >gi|257083337|ref|ZP_05577698.1| amidase [Enterococcus faecalis Fly1] gi|256991367|gb|EEU78669.1| amidase [Enterococcus faecalis Fly1] Length = 482 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 133/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ +S EL+ + ++ N ++N ++ +Q+A ++++++ G Sbjct: 9 QQLKEHKVSHTELLKDIEKKVQKLNPKINGFVTFDSQEAEVTYQKNEQQ-----DTLFAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIESFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMEQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|218778586|ref|YP_002429904.1| amidase [Desulfatibacillum alkenivorans AK-01] gi|218759970|gb|ACL02436.1| Amidase [Desulfatibacillum alkenivorans AK-01] Length = 480 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 140/496 (28%), Positives = 217/496 (43%), Gaps = 46/496 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + E+ FM + +R K+++ +ELVD+ I IE N Q+NA I + ++AR EE+ Sbjct: 4 LKEIAFMDAMAQAELIRKKEVTPLELVDAAIDRIERLNPQLNAVITPMYEQAR---EEAK 60 Query: 61 KRIINGDARDLEGIPIGIKDCFA-TKGIHTQACSHILDG-FRPHYESTVTQKLWDNGAVM 118 + G G+P +KD A K + +L G F+P ++S +T +L G ++ Sbjct: 61 GELPQGP---FTGVPFLLKDIGAMAKDAPMALGNRVLKGVFKPDHDSELTVRLRKAGFII 117 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N EF + E +GP +PW + TPGGSSGG++AAVA + AA+ G Sbjct: 118 LGKTNTPEFGALPTTEPLAFGPTHNPWDL-----ERTPGGSSGGAAAAVASRMIAAAHGN 172 Query: 179 DTGGSIRQPASFTGTVGIKPTYGR-CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 D GGSIR PAS G G+KPT R + L +T +VRDSA +L A +G Sbjct: 173 DGGGSIRIPASCCGVFGLKPTRARNPAGPDFGDMLSGLIAEHALTMSVRDSAAILDATSG 232 Query: 238 YDECDATCVNLPVPDYERALDQSIQG------MTVGIPKEYRLDYLSPTIDKTWQQGISW 291 D D P R + + + V I D P K + ++ Sbjct: 233 PDIGDPYW----APPNARPFLEEVGANPGKLRIAVDITTHLEEDP-HPDCIKAVEHTVNL 287 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 ++ G ++ E S+ T L +SN A G G+ Sbjct: 288 CRELGHEVKEASVESTIKPLDLLRAFD-TLWTSNAANTVGAIAGM--------------A 332 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 I E + + Y + + S Y+RA + R+ F G DV+LTPT Sbjct: 333 KIEPSTEFFEPLTMAMYEMGKKQSASDYMRAVTLIQRFSREMARFF-MGCDVLLTPTLGE 391 Query: 412 SAFPLGKEENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 LG+ + + + + + +T N G PA+S+P + +P+G +G+ Sbjct: 392 PPVKLGELDASGENPMEAWKRMGRFTPYTAKFNATGQPAMSIPLYWNGQNLPIGSHFVGR 451 Query: 467 PFREETLFSVGQIIEK 482 E TLF + +EK Sbjct: 452 FGDEATLFRLAAQLEK 467 >gi|134100558|ref|YP_001106219.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Saccharopolyspora erythraea NRRL 2338] gi|133913181|emb|CAM03294.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Saccharopolyspora erythraea NRRL 2338] Length = 419 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 210/474 (44%), Gaps = 64/474 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RS +A ELV + A NS + A++E++ ++A A +D+ + G R L GI Sbjct: 1 MRSSGTTATELVARALDAARNSAT--GAFVELLPERAAQDAAVADRELAGGTDRGPLHGI 58 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD G T+ + L ++ + +L D GAV++GK E A Sbjct: 59 PVAVKDNIDVAGAWTRCGTRDLGHHCAERDAAIVSRLRDAGAVVIGKTRTHELA------ 112 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G V R+ + T G S G ++A G + A +GTDTGGSIR PA+ G V Sbjct: 113 ---WGMVTPGCRNPLDPARITGGSSGGSAAAVAEGVVPVA-LGTDTGGSIRNPAALCGVV 168 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIK G G+ AP+ D G++ TV D + L + P Sbjct: 169 GIKAGVGTLPTDGVAPLAPTQDAPGVLGATVSDCRVALTVLGAEPSG---------PPVR 219 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 R VG+ +++ + P + + L++AG + VE+++ ++ A+ A Sbjct: 220 R----------VGVIRDHWARRVEPPVAAAIDDAVLRLREAGVEAVEVAVRNSDLAMAAS 269 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 Y+I AE++ + D + G +V +D+L L +R Sbjct: 270 YVIMLAESARHWWPADPDQVGPQV--RDVLR------------------------LGARV 303 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIY--N 431 D+ Y RA +R I +AF Q VD +L ++P A +G E +G M + + Sbjct: 304 ADADYRRALAVRRSIIAGLDDAFGQ-VDALLMASSPVLASRIGDELTGCAGRMLPVQAAH 362 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 T +++G+PA+SVP + +P G+Q + + L +++E+ G Sbjct: 363 ASATSLASVSGVPALSVPGLPGPEGLPTGVQFLAP--TTDPLLRCAELLERGRG 414 >gi|307305066|ref|ZP_07584815.1| Amidase [Sinorhizobium meliloti BL225C] gi|306902406|gb|EFN33001.1| Amidase [Sinorhizobium meliloti BL225C] Length = 471 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 125/491 (25%), Positives = 212/491 (43%), Gaps = 61/491 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L +++ + +R+++ISAV++ ++ I + + + + A AA + D Sbjct: 1 MTALENLSIRKLAAMVRAREISAVDVTTHFLGRIVAYDDALCGFNVPAPEAALDAAHDLD 60 Query: 61 KRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L GIP+ IKD G+ + S G ++TV ++ G ++L Sbjct: 61 TNLNAGGEAGALAGIPLSIKDTADVAGLPSAGASASRSGRTATADATVVARMKAAGGIVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E A G + + P +PW + D+F PGGSS GS VA LC S+ TD Sbjct: 121 GKANCHELAFGGPSFDLPFPPARNPW----NLDRF-PGGSSSGSGVTVAAGLCLGSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PA+ G G+KP + GI A ++D G + RT D+ IL +AG Sbjct: 176 TAGSIRLPATMCGVFGLKPGHDTLPLDGIAVLAATMDHVGPVARTADDTRILFDVMAGRS 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPK-EYRLDYL-SPTIDKTWQQGISWLKDAGA 297 S++G+ +G+P+ E+ + L P + I + GA Sbjct: 236 PGSPFV-------------GSLKGLRIGVPENEWDVGRLIHPDVRAAIDGAIEVARSEGA 282 Query: 298 KIVEISLPHTQ-YALPAYYI----ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 IV + LP + + P + ++ A+S A +D Sbjct: 283 DIVPLRLPSLEDFHAPGTVLMMCEVAAEHAASVRAAWD---------------------- 320 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 FG + R ++G + H R A ++R ++++ +A VD +L P Sbjct: 321 -KFGAIFRARALVGEGIA------VHDFRLAERLRPVLRKRLLDAMSN-VDCLLVPGALA 372 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 PL + + + + + N G PA++ PA MP+G+Q++G P E Sbjct: 373 PPGPLASVD----PFYFMKDPIPNIVANYTGFPALAFPAGFGGDGMPVGVQIMGVPRSEH 428 Query: 472 TLFSVGQIIEK 482 L + + E+ Sbjct: 429 RLLDIAESFER 439 >gi|126731637|ref|ZP_01747442.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37] gi|126707803|gb|EBA06864.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37] Length = 384 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 122/433 (28%), Positives = 189/433 (43%), Gaps = 64/433 (14%) Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGK 121 + N D +G+ + +KDC G T + S L DG + V + L +GA ++GK Sbjct: 12 VSNLDLGTADGLAVAVKDCIDIAGHVTASGSAALADGAPAKAHAKVVEDLLASGAHVVGK 71 Query: 122 LNMDEFAMGSSNETSYYGPVISP-WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 M E A G + + +G ++P W D+ PGGSS GS+ AVAG LC A++GTDT Sbjct: 72 AKMHELAYGMTGVNAAFGTPVNPRW-----PDRI-PGGSSSGSAVAVAGDLCDAAVGTDT 125 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+RQPA G GIKPT+GR SR G +LD G++ R+ + +L +A+ Sbjct: 126 GGSVRQPAICCGLYGIKPTFGRISRDGCHPAESTLDCVGVLARSAK---VLTRAM---QA 179 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI-SWLKDAGAKI 299 D T P+ R R+D L P I + G+ L +AG Sbjct: 180 ADPTFTPEPLTAAPRM-------------ARVRVDDLDPRIGEPLVYGLMEGLPEAG--- 223 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + LP + A A + AE + + ++ R G +V Sbjct: 224 -YVQLPGMEEAFDAAMTVIGAETY-----------------RACHALLDDPR---LGDDV 262 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ + R +A +RT + A VDV++TP PT P E Sbjct: 263 RARLSAAGAITPDRLE-----QAEDVRTRFTAEVDAALAS-VDVLITPAMPTVP-PTLDE 315 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + + F N+ G PAI +P ++PLGLQ++G+ + L +V + Sbjct: 316 ATDPAKVLPLTR--FLRPFNLTGHPAIVLPVL---GELPLGLQIVGRKGADAQLCAVAEW 370 Query: 480 IEKEAGYFRPHKW 492 + FR ++ Sbjct: 371 MADTCPMFRKEEF 383 >gi|70606696|ref|YP_255566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] gi|68567344|gb|AAY80273.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus acidocaldarius DSM 639] Length = 395 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 122/460 (26%), Positives = 206/460 (44%), Gaps = 71/460 (15%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 ++E NS+ N + +V K R D L + IKD KG+ T A Sbjct: 1 MSLEELNSRYNIFTRLVNIKKR-------------DKGRLSNLKFSIKDIIDIKGVPTTA 47 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL+ + P + V +K+ + G ++GK N EFAMG++N +S +GP +P+ Sbjct: 48 GSRILNDYIPDTNAYVVEKILEEGGEIIGKTNTHEFAMGATNTSSIFGPAKNPY----DI 103 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 ++ + GGSSGG++ +VA L +GTDTGGS+R PA+ G +G KP+ G GII F Sbjct: 104 ERIS-GGSSGGAAVSVALGLVDVGVGTDTGGSVRIPAALCGVIGFKPSIGLIPTDGIIPF 162 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + S+D G I + D +N R L+ ++ TV Sbjct: 163 SWSIDTVGFIVK------------------DMQTLN-------RVLEVTLTDKTV----- 192 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 L I + + G+ D V +L L Y+ I + L +Y G Sbjct: 193 -----LVSQIRRRPRVGLFLFGDDE---VSRALKPVVDTLNNYFDIKEIH-NEILEKYSG 243 Query: 332 -VRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 +R + + E + R + +V+ + G+ +L D+ LR+R + + Sbjct: 244 DIRRKIVLPEAYSYHRKWFKERKDDYFPDVRRLLENGSKILGYEYVDA--LRSRHV---L 298 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH--IYNDVFTVAVNMAGLPAIS 447 R++ + F VDV+++PTT A + + N + + N T N+ G P+IS Sbjct: 299 IREYMKIFSD-VDVLISPTTKVVAPKISEVIGNELTFREKLVSN---TEIFNVTGAPSIS 354 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 +P A +P+GL + G+ +++ T+ + + I G+ Sbjct: 355 IPVAQL-NGLPVGLMVSGELYQDGTVLDIAKRILDIVGFI 393 >gi|239832703|ref|ZP_04681032.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum intermedium LMG 3301] gi|239824970|gb|EEQ96538.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum intermedium LMG 3301] Length = 462 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 142/499 (28%), Positives = 224/499 (44%), Gaps = 52/499 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS ++ E ++K +S VE+ ++ I IE ++NA AR +A+ S+ Sbjct: 1 MSNPADLSAVELVSAYKAKSLSPVEVTEAVIARIEAYEPKLNALWAYDPDAARVSAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ AT+G L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATEGTAVPLGCAALPLKPASADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT-PGGSSGGSSAAVAGFLCAASIGT 178 K M + M SS +S++ +PW D T PGGSS G+ +A A IGT Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPW------DLGTNPGGSSAGAGSAGAAGYGPLHIGT 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAG 237 D GGSIR PA + G VG+KP++GR I P L + AG +TRTV DSA+ + ++ Sbjct: 175 DIGGSIRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADSALYMSVLSR 229 Query: 238 YDECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLD--YLSPTIDKT---WQQGISW 291 D D ++LP D + +LD ++G+ +G+ LD + P D+T + Sbjct: 230 PDRRDG--MSLPYQDIDWMSLDIDVKGLKIGL----WLDAGFGEPVGDETRAAVEAAAKL 283 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENT 350 L DAGA II P N DG+ R+ DI +M Sbjct: 284 LADAGA------------------IIEPVAPFLNRTMIDGLDRFWRARSWSDIRKMTPEN 325 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ ++ I T + YL ++ + R+ A +G D I++PT P Sbjct: 326 RA-----KILPYIYQWTETAEGLTGEEVYLGFAQMDAM--RNAALAASKGFDFIISPTAP 378 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +P + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + Sbjct: 379 MPTYPAEWASPVNDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDD 438 Query: 471 ETLFSVGQIIEKEAGYFRP 489 + + + E+ RP Sbjct: 439 LGVLRLAKAYEEMRPAQRP 457 >gi|76819364|ref|YP_337659.1| amidase [Burkholderia pseudomallei 1710b] gi|254300266|ref|ZP_04967712.1| amidase family protein [Burkholderia pseudomallei 406e] gi|76583837|gb|ABA53311.1| amidase family protein [Burkholderia pseudomallei 1710b] gi|157810188|gb|EDO87358.1| amidase family protein [Burkholderia pseudomallei 406e] Length = 546 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 80 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 139 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 140 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 199 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 200 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 254 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 255 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 314 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ + + + L+ G I + +LP A Sbjct: 315 FTQSLDADMRGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 368 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 369 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 416 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 417 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 470 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 471 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 529 >gi|332285874|ref|YP_004417785.1| amidase [Pusillimonas sp. T7-7] gi|330429827|gb|AEC21161.1| amidase [Pusillimonas sp. T7-7] Length = 447 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 133/479 (27%), Positives = 213/479 (44%), Gaps = 46/479 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGD 67 ++E + L + ++V+L + ++ I+ + + Y V +A AAA+ SD G Sbjct: 5 LTELQTALNKGETTSVKLTQAALERIQAQDGEGARVYTRVYETQALAAAQASDLLRAVGP 64 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 AR ++G+P+ +KD F G T A S +L D + + Q+L GAV++GK NM Sbjct: 65 ARSPIDGLPVSVKDLFDISGDTTLAGSTVLKDAPAAQQNALIVQRLIGAGAVIMGKTNMT 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA +YG SPW D +K PGGSS G+ +VA + A+IGTDTGGS+R Sbjct: 125 EFAFSGLGLNPHYGTPSSPW---DRANKRIPGGSSSGAGVSVADQMAVAAIGTDTGGSVR 181 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++F G G KPT R S+ G + + SLD G + +V A+L +AG Sbjct: 182 IPSAFCGLTGFKPTARRISQTGALPLSFSLDSIGPLAASVSCCALLDGILAGQPRV---- 237 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +PV +++ + +P LD + +T++Q ++ L+ GA++ I LP Sbjct: 238 --MPVAP-------ALKQLRFAVPSAVVLDGADDHVRRTFEQTLATLQAGGAQVDTIDLP 288 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 Q + + R G+ + E E + + V RIM Sbjct: 289 EFQEL-------------AFINRQGGL---VCAEAWAWHEKLLEQHADQYDPRVASRIMR 332 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G + + + R+ I +L +R D +L PT P A P KE S Sbjct: 333 GKNISTPAYIELLQTRSAWIASLQQR------LHHYDALLMPTVPVVA-PTIKELQESDE 385 Query: 426 MGHIYNDVFT---VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N + +N A+S+P P+GL + G ++ + +VG IE Sbjct: 386 SYFAANGLILRNPTLINFFDGCALSIPCH-AAGTAPVGLMVAGPAMHDQHILNVGASIE 443 >gi|237508646|ref|ZP_04521361.1| amidase family protein [Burkholderia pseudomallei MSHR346] gi|235000851|gb|EEP50275.1| amidase family protein [Burkholderia pseudomallei MSHR346] Length = 484 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 138/479 (28%), Positives = 214/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N+ +NA + + A A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLAHIERVNADVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMARTVVDVAQLLAIQAGYDRRDPLSLAEDPRR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD + G + ++ YL+ + + + L+ G I + +LP A Sbjct: 253 FTQSLDADMWGKRIAWVGDWN-GYLAMEAGVLELCESSFDTLRAIGCDI-DAALP----A 306 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 PA I A +L + G ++L Y E +R E + G + Sbjct: 307 FPAERIWRSWLAHRHL-----------LSGGNLLMHYREPSRRALLKPEAIYEAQ-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSM 426 L ++ Y++ R+ + LI AF + D I P+ AF L + +G Sbjct: 355 LGAADVYEASAARSAWYQALI------AFFERFDYIAAPSAQVFAFDVELRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEKE 467 >gi|149916509|ref|ZP_01905026.1| Amidase [Roseobacter sp. AzwK-3b] gi|149809611|gb|EDM69467.1| Amidase [Roseobacter sp. AzwK-3b] Length = 446 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 131/472 (27%), Positives = 209/472 (44%), Gaps = 52/472 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 + S +S+VELV S + IE ++S + A+ + A A A A E D+ G A L GI Sbjct: 17 ISSGRLSSVELVKSCLAQIEATDSTIKAWAFLDADMALAQAAECDRIRKAGLATGPLHGI 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD T + TQ + I + + + + ++L D GAV++GK E A +NE Sbjct: 77 PVGLKDIIDTAEMPTQRGTPIFADRQTDHSARLVERLRDAGAVIMGKTVTTEMAFVHANE 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 T R+ + D+ G SSG ++A A + S+GT T GS+ +PASF G Sbjct: 137 T----------RNPNDADRSPGGSSSGSAAAVAACHV-PLSVGTQTNGSVIRPASFCGAF 185 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G KPT G SR G++ + SLDQ G R++ D A+L AI GYD+ D P PD Sbjct: 186 GFKPTRGVISRAGLLQTSVSLDQVGCFGRSLEDVALLTDAIGGYDQTDPVSYARPRPDM- 244 Query: 255 RALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + G + E + P D+ +D ++EI P Sbjct: 245 ------LTGARADVLVEPEFAWFELPFNDRLAGDA----RDGLEAVLEILGPKVTR---- 290 Query: 314 YYIISPAEASSNLARYDGV--RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + PA+ SNL Y + D+ + + + S Q + R + Sbjct: 291 ---MEPADTLSNLVAVQARIHEYEIAKHQADVFDAHWDQISPTL-QPIITR--------A 338 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + + Y A ++ + F F D I+ P+ A PL E + Sbjct: 339 RQISNDEYEDALAVKASAEAFFANFFLD-YDAIIAPSAAGEA-PLFGEGTG--------D 388 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +F +AGLP +S+P + + +P+G+QLIG +++ L + ++K Sbjct: 389 PIFCTLWTLAGLPCVSLPLLVGQHGLPIGVQLIGPAEKDDRLLRTARWLQKH 440 >gi|307324957|ref|ZP_07604162.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306889455|gb|EFN20436.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 483 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 148/504 (29%), Positives = 227/504 (45%), Gaps = 43/504 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E NF LR+ ++++ EL D I IE + +NA +ARAAA ++D+ Sbjct: 2 EWNFQTAERLAAALRAGEVTSAELTDQAIARIERDDKAINAICVPDFDRARAAARDADQA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ R L GIP+ +K+ + G+ T F P ++ +L D GAV+LGK Sbjct: 62 RARGEDRPLLGIPVTVKESYNIAGLPTTWGMPPHRDFMPAEDAVQVSRLKDAGAVVLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ + YG +PW TPGGSSGGS+AA+A A SIG+D G Sbjct: 122 NVPLGLQDIQSFNEIYGTTNNPW-----DHGRTPGGSSGGSAAALASGFGALSIGSDIAG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-SFAPS----LDQA--GIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G++ AP+ LD A G + RT RD +LL + Sbjct: 177 SLRTPAHFCGVYAHKPTLGLAANRGMVPPSAPALPVDLDLAVVGPMARTARDLTLLLDIM 236 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D A + LP +ER ++ V I E+ L + + L Sbjct: 237 AGPDPLTLGVAHHLRLPPTRHER-----LRDFRVLILDEHPLIPTGSAVRAGVNRVADAL 291 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 D GA VE P A + S S ++AR+ +E Y+ RS Sbjct: 292 VDGGAH-VERHSPLLPDLAEAGTLYSQLLVSGSVARFP-------------IEPYDRLRS 337 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G + + + + +L+A R L + + + F + D ++ P TPT Sbjct: 338 RAAGLSADDQSLDAARLRAMVFSHPDWLQANNRRELHRHGWRQLFAE-FDAVVCPITPTP 396 Query: 413 AFPLGKEEN------NSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 AFP + N + + + Y D V+ M GLPA ++PA + +P+G+QLI Sbjct: 397 AFPHDHDPNPLERRIDIDGVDYPYFDQLVWAGLATMPGLPATAIPAGRSPEGLPVGVQLI 456 Query: 465 GQPFREETLFSVGQIIEKEAGYFR 488 G F + T + +++E++ G F+ Sbjct: 457 GPMFEDRTPLRLAELLEEKIGGFQ 480 >gi|331016596|gb|EGH96652.1| amidase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 467 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 137/486 (28%), Positives = 209/486 (43%), Gaps = 40/486 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + I+ N +NA+ +V A+ A A + G Sbjct: 4 VIEAGALVRRGCMTPIRLTELCLSVIKTHNPTLNAFGDVYAEAALEQAWTMTAELQRGKP 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDAVPAQDAPIIRRLKGAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +P T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNP-----GDPTLTSGGSSSGSAIAVAARMVPATLGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D Sbjct: 179 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDVLSGPDPLDHQA-- 235 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LP PD E L + Q + K R+ + D I+ +A + SLP T Sbjct: 236 LPAPD-ESFLARCDQPL-----KPLRIGFCPTLFDTPVDPQIAAAVEAAVANIARSLPVT 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L + A + G+ YG LE + GF + ++ Sbjct: 290 VSTLTLDWQDPLATFETLWVAGRGIAYG------KALEQQLDQLDPGFAELIRR------ 337 Query: 368 YVLSSRCYD-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF------PLGKEE 420 S CY YL+A + R FE D+++ PT P F P G Sbjct: 338 ----SACYGLGDYLQAMQQRAAFANQVHALFED-YDLLIMPTLPILPFAADDVAPAGYAG 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +S ++ FT N++G PA ++P + +P+GLQ++G F + + + Sbjct: 393 QDS-ALPWARWTPFTYPFNISGNPAANLPCGWGTEGLPIGLQVVGPRFADAHVLQFCAAV 451 Query: 481 EKEAGY 486 E A + Sbjct: 452 EAIAPW 457 >gi|307278127|ref|ZP_07559209.1| amidase [Enterococcus faecalis TX0860] gi|306505116|gb|EFM74304.1| amidase [Enterococcus faecalis TX0860] Length = 482 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 134/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQ-----DTLFAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMISPEATLAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPILKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHITAAGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|171695870|ref|XP_001912859.1| hypothetical protein [Podospora anserina S mat+] gi|170948177|emb|CAP60341.1| unnamed protein product [Podospora anserina S mat+] Length = 655 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 146/503 (29%), Positives = 213/503 (42%), Gaps = 56/503 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L S + V+LV++YI I NS + A ++ AA+ R L GIP Sbjct: 129 LDSGLFTTVDLVNAYIARINEVNSTLKAVTQINPDALSIAADLDAARAAGDKKGPLHGIP 188 Query: 76 IGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD T + A S+ L G + +STV KL GAV+LGK NM ++A S Sbjct: 189 ILLKDSIGTFDKMENTAGSYALVGAKVPEDSTVVAKLRKAGAVILGKANMSQWANFRSFN 248 Query: 135 TSYYGPVISPWRSMDSTD------KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +S + W S K P GSS GS A++ L AAS+GT+T GSI PA Sbjct: 249 SS------NGWSSTGGQTEGAYFPKQDPVGSSSGSGVAISIGLAAASLGTETHGSIIAPA 302 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 VGIKPT G SR ++ + D G + RTV+D+A LL AIAG D D ++ Sbjct: 303 QMNNLVGIKPTVGLTSRHLVVPISERQDTIGPMARTVKDAAYLLAAIAGKDSKDNYTSSI 362 Query: 249 P---VPDYERALD-QSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDAGAKIV- 300 P +PDY A S+ G +GIP+ L + I ++ + L++A A I+ Sbjct: 363 PFETLPDYVSACQLGSLSGKRIGIPRNLIPSPLPQSFQYIVSSFNTALGVLREANATIID 422 Query: 301 EISLP-HTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 ++ LP L Y + + AE S L RY D+ + T+S G + Sbjct: 423 DLYLPGQVLMNLGPYQMHVVNAEFISALPRYFASLTSNPANLTDLQSLINWTKSHGHLEH 482 Query: 359 VKHRIMI---GTYVLSSRCYDSHYLRAR---KIRTLIKRDFTEAFE-QGVDVILTPT--- 408 R + G + DS Y +I + A + +D ++ PT Sbjct: 483 YPDRDVARWEGVLTNTGHGNDSPYFWGNYSAQIYAAGSQGILGALKNHSLDALVIPTWWS 542 Query: 409 --------TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 TP P+GK N+ + D V AG +P G Sbjct: 543 ATMPAMLGTPVVTVPMGKLPNDGSVVEE--KDQRGDLVRWAG-------------NLPFG 587 Query: 461 LQLIGQPFREETLFSVGQIIEKE 483 + +G+ F EE L + E++ Sbjct: 588 ISFVGEGFSEEKLIGLAYDFEQK 610 >gi|209963508|ref|YP_002296423.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Rhodospirillum centenum SW] gi|209956974|gb|ACI97610.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Rhodospirillum centenum SW] Length = 461 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 123/453 (27%), Positives = 198/453 (43%), Gaps = 36/453 (7%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 R + I V ++ + I + ++ A+ V+ + AR AA ++ G L G + Sbjct: 15 RVEGIPPVLRLEEQLSRIGRLDRELRAFALVLPELAREAAWRLERGPGTGP---LAGRTL 71 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F +G+ T A + +T L G + LGK E A G+ Sbjct: 72 AVKDLFDLRGVPTAAGARTPVVDEAPATATALDHLLRAGMIPLGKAATVELAFGTWGINR 131 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 G +PW D T PGGSS GS+ AVA L ++G+DTGGSIR P + G GI Sbjct: 132 ATGTPRNPW---DMTVARVPGGSSSGSAVAVAAGLADMALGSDTGGSIRIPCALNGISGI 188 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR SR G++ +P+LD G + +V ++A LL+A+AG D D + P A Sbjct: 189 KTTVGRVSRAGVVPLSPTLDTVGPMAWSVAEAAALLEAMAGPDPADPATLERPGFGAAAA 248 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 L +S++G + + + L ++ + + + +S L+ GA++ E+ PA Sbjct: 249 LARSVRGCRLAVLGDADLASVADPVGAAYLEALSVLERQGARLQEVR--------PAVAP 300 Query: 317 ISPAEASSNLARYDG-VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 + E + L +G R+ RVE F E+ + +S Sbjct: 301 GACVEPTGRLIGAEGWRRWSDRVE--------------RFAPEMDPGTLARLQAAASSTE 346 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 H R A+ Q D +LTPT P +A PL + + + FT Sbjct: 347 ADHARLLAARAADQGR--FHAWMQDFDALLTPTVPVTAPPLDTADETT-----LPFSSFT 399 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 N LPA+++P + +P+ LQ++ P+ Sbjct: 400 RMANWLDLPAVALPCGQSGEGLPVSLQVLALPW 432 >gi|316935363|ref|YP_004110345.1| allophanate hydrolase [Rhodopseudomonas palustris DX-1] gi|315603077|gb|ADU45612.1| allophanate hydrolase [Rhodopseudomonas palustris DX-1] Length = 601 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 112/419 (26%), Positives = 188/419 (44%), Gaps = 46/419 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD G+ T A ++P ++T KL GA+++GK N+D+FA G Sbjct: 66 LYGVPVAVKDNIDVAGLPTTAACPAFS-YQPACDATAVAKLRAAGAIVIGKTNLDQFATG 124 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG + RS PGGSS GS+ AV L S+GTDT GS R PA Sbjct: 125 LVGVRSPYGVPRNAIRS-----DLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAML 179 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KP+ G S G++ +LD + T D+ L+ +A D D PV Sbjct: 180 NNIVGLKPSLGMISTAGVVPACRTLDCVSVFALTTDDALTALRVMAAPDAEDPFSRERPV 239 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVEISLPHTQY 309 A+ + +G+P++ +L + + + ++ + + GA++VEI Sbjct: 240 ----AAVSAMPSRVRLGVPQKDQLQFFGDDLSARGYEDALDRWRRLGAELVEID------ 289 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ-----EVKHRIM 364 + P Y+ R L EG + E Y R + Q V +I Sbjct: 290 -------VEP--------LYETAR--LLYEGPWVAERYLTIRELLETQPDAVHPVTRQIT 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + LS+ + R + +R +R FT G+D ++ PT PT A+ + + + + Sbjct: 333 LAGAKLSAADTFAALYRLQALRKHAERSFT-----GIDALVLPTAPT-AYTVEEVQADPI 386 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ +T VN+ L ++VPA++ +P G+ L+ R+ L S+G++ + Sbjct: 387 TLNSRLG-TYTNFVNLLDLCGLAVPASIRNDGIPFGITLLAPAGRDAELASLGRVFHAD 444 >gi|307604188|gb|ADN68490.1| SorP [Sorangium cellulosum] Length = 508 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 121/499 (24%), Positives = 212/499 (42%), Gaps = 87/499 (17%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R++ +S+ +++ +Y+ IE+ N ++NA + V ++A +A E+D + G R L G+ Sbjct: 36 IRTRALSSEQVITAYLDRIESFNGRVNALVTVDQERALRSAREADAELREGRIRGPLHGV 95 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD T G+ T A P ++ V KL G +++GK N Sbjct: 96 PVTIKDALLTAGLRTTAGHPKYAELVPDADAWVVDKLKRAGVIVIGKTNCSTLCSDIQTR 155 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW + T GGSSGG +AAVA + IG+DT GSIR P+S+ G Sbjct: 156 NEIFGVTNNPW-----SVGRTAGGSSGGEAAAVALGMSPLGIGSDTAGSIRIPSSYCGVF 210 Query: 195 GIKPTYGRCSRLGIISF-------APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 G+K + G+ R G + SL G I R++RD + + + G Sbjct: 211 GLKTSIGKIPRDGHVPLHDETHARPDSLTVIGPIARSIRDLTLCYEVLTG---------- 260 Query: 248 LPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTID----KTWQQGISWLKDAGAKIVEI 302 + + +G P+ + D+ + ID + + S L GA + ++ Sbjct: 261 ----------ESTTKGAPPAPPRIFWTQDFTTQVIDDEVTRALDETFSVLTRRGADVRKV 310 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 + P L + Y+ L M+E E R Sbjct: 311 APPFPLEKLFSTYM--------------------------RLYMFE------CAPEDISR 338 Query: 363 IMIGTYVLSSRCYD-------SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 ++ + +S Y R + ++++KR E F + D + P TP++AF Sbjct: 339 ALLPLFFVSEAIRSPFRGGARGSYERLKGKQSVLKRTMDE-FLRACDCWVLPATPSTAFV 397 Query: 416 -----LGKEENNSGSM-GHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 G + + G M H Y + T N+ G P++ +P A ++ MP+G+Q++G+ Sbjct: 398 HQKTGRGIQVTSRGRMKKHSYWEASMGLTYPFNLLGNPSVVIPLARGKEGMPIGVQVVGR 457 Query: 467 PFREETLFSVGQIIEKEAG 485 + L SV + + + G Sbjct: 458 LGEDRKLLSVAEHVARMIG 476 >gi|239813130|ref|YP_002942040.1| Amidase [Variovorax paradoxus S110] gi|239799707|gb|ACS16774.1| Amidase [Variovorax paradoxus S110] Length = 459 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 140/471 (29%), Positives = 207/471 (43%), Gaps = 71/471 (15%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHIL 96 N ++NA + + A+ A AA +S R +G A L+G+P IKD +G+ T S L Sbjct: 38 NPRLNALVVLDAEGAAEAAAQSTARWRSGRALGALDGVPATIKDNLQVRGLPTHWGSRAL 97 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 GF + +L + GAV+ GK N+ EF M +GP +PW TP Sbjct: 98 AGFVAERDELPVARLREAGAVIFGKTNVPEFTMQGYTANPVFGPTGNPW-----NPALTP 152 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSL 215 GGSSGG+ A VA C ++GTD GGSIR+PAS T VG+KP+ GR R G+ Sbjct: 153 GGSSGGAVALVAAGGCPIALGTDGGGSIRRPASHTNLVGLKPSRGRVRRGNGLPPIFLDF 212 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 + G + R V D A +++AIA DA +A K R+ Sbjct: 213 EVVGPMARCVDDVAAVMRAIAPRAAADAP---------HKA-------------KAARIL 250 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 YL D I+ L DA A+ + +L H LP + + AEA + R+ Sbjct: 251 YLPRFADHPVDPRIARLVDAAAEKLA-ALGHEVTTLPRFEL---AEAVNQ-------RWP 299 Query: 336 LRVEGKDILEMYENTRSIG--------FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 L + + + ++ R + FG ++ G S+R A ++R+ Sbjct: 300 LLAQ-VGLAWLVDHPRELWPRPFDPALFGPAMQANTGTGRAA-SARELFELLFEAERLRS 357 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGK------EENNSGSMGHIYNDVFTVAVNMA 441 + FEQ D +LTP T +P + G GH VF VN Sbjct: 358 ----ELAGLFEQH-DFLLTPATAALPWPAADTHPPRIDGREVGPRGHA---VFAGFVNAL 409 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 GLPAI++P E +P+GLQL+ + ++ L ++ + E R H W Sbjct: 410 GLPAIALPCGFAE-GLPVGLQLVAREGGDDALLALARDFE------RAHPW 453 >gi|300869272|ref|ZP_07113864.1| putative amidase [Oscillatoria sp. PCC 6506] gi|300332728|emb|CBN59062.1| putative amidase [Oscillatoria sp. PCC 6506] Length = 464 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 139/496 (28%), Positives = 216/496 (43%), Gaps = 63/496 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F + E +RS ++S +EL + Y++ I ++Q+ +Y+ V+AQ+A A A+ ++ Sbjct: 5 ELAFSSALEQARSIRSGEVSPLELAELYLERIGRLDAQVGSYVTVMAQEAIALAKSQTEQ 64 Query: 63 IINGDAR----DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + R G+PI IKD G+ L Y+ V K+ G + Sbjct: 65 LTRTSDRASLPPFFGVPISIKDLTPVAGVRCTYGVPALLSNIATYDDGVVAKIKAAGFNI 124 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK + E + P +PW ++D +TPGGSSGG++AAVA LCA + G+ Sbjct: 125 LGKTATAQVGSLPYTEPEGFPPTRNPW-NLD----YTPGGSSGGAAAAVAAGLCAIAQGS 179 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR PA G VGIKPT GR S + + + G + RTVRD+A LL ++GY Sbjct: 180 DGGGSIRGPAFCCGLVGIKPTRGRVSHAPVGDYQSGISTNGPLARTVRDAAALLDVMSGY 239 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAGA 297 D + P + A DQ + + V L +S + + + L + G Sbjct: 240 ITGDPYWLPNPELSFLEAADQKLSNLRVAFSTTIAPLGEVSSSCQQAVIDTVKLLSELGH 299 Query: 298 KIVEISLPHTQYALPAYYII---------SPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 I E P + + +I PA A + R+ + + Sbjct: 300 NI-EPGCPDFAGLIEPFSVIWQSGVAASGIPAPALEPMNRW----------------LLD 342 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 TRS G YL A +I R F+ DV++ PT Sbjct: 343 RTRSAG-----------------------EYLGAVSQMQVIARRIVGFFDN-FDVLVLPT 378 Query: 409 TPTSAFPLGKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +G+ N + ++ I + + N +G PAI++P L +PLG+Q+IG Sbjct: 379 YMYPQIRVGEWANLTPEETLEKIIHWIAPCPPFNASGQPAIALPTGLDTNGLPLGIQIIG 438 Query: 466 QPFREETLFSVGQIIE 481 +P E TL ++ IE Sbjct: 439 KPGAEATLIALAAQIE 454 >gi|307727506|ref|YP_003910719.1| Amidase [Burkholderia sp. CCGE1003] gi|307588031|gb|ADN61428.1| Amidase [Burkholderia sp. CCGE1003] Length = 484 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 129/479 (26%), Positives = 207/479 (43%), Gaps = 73/479 (15%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA + A AAA D AR L G+P+ +KD T G+ T A + L GF Sbjct: 45 NALTVIDLDGALAAARRIDALPAEARARLPLAGLPVVVKDNINTVGLATSAGTPALQGFV 104 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGG 158 P + Q+L D GA++LGK NM E A G S+N ++ GPV +P+ PGG Sbjct: 105 PDVNARSVQRLLDAGAIILGKANMHELAFGITSTNLAAHAGPVRNPYDP-----ALIPGG 159 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISF 211 SSGG++AA+A + A +GTDTGGS R PA+ TGT G +P+ G ++ Sbjct: 160 SSGGTAAAIAARIAPAGLGTDTGGSTRIPAALTGTAGFRPSVGNGGAERRYHDPDAVVPI 219 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + + D G + R D A+L I G A +N G+ +G+P Sbjct: 220 SHTRDTVGPMARNAADIALLDGVITGEGPLTAVALN---------------GLRIGLPAP 264 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ---------YALPAYYIISPAEA 322 L+ ++ + + L+ AG V +++ + A+ + A Sbjct: 265 LWAG-LAQDVEAVARSAVKKLEAAGVVFVPVAMSELEDLNDMVGGPIAIHEARVDLEAWL 323 Query: 323 SSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 ++N A V R+ D+ +Y+ V+ + DS Y Sbjct: 324 AANHAPVQTVAELAARIASPDVRAIYD--------------------VVLAGALDSRYEA 363 Query: 382 A-RKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIYNDVF-- 434 A R ++ F ++ +D +L PTT +A P+ E N S ++ G D Sbjct: 364 ALNHWRPRLQAYMAATFADERLDALLFPTTRLAAVPI-DEINGSSTVSVDGAPAIDTMEA 422 Query: 435 ----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 T + +G+P +S+PA + + +P+GL+L G + L ++G +E+ G P Sbjct: 423 FLRNTDPASTSGIPGLSLPAGISAQDLPVGLELDGPLGSDRRLLAIGVAVEQLLGEVPP 481 >gi|325673368|ref|ZP_08153060.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Rhodococcus equi ATCC 33707] gi|325555958|gb|EGD25628.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase [Rhodococcus equi ATCC 33707] Length = 571 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 138/492 (28%), Positives = 226/492 (45%), Gaps = 56/492 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +++ + E+ LRS + EL+D+ + + ++ +I + + A AA+ + Sbjct: 61 VTDPALLGAVEAASLLRSGRLHPRELLDACLSRSAALDGEIGGWIRIYPEMAYEAADAAA 120 Query: 61 KRI------INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 +R+ NGDA + GIP+ +KD FA G+ A S +L G +STV ++L D Sbjct: 121 QRLSAKSRSTNGDAPLVCGIPLALKDLFAVSGLPLTASSRVLAGNIAAGDSTVWRQLRDA 180 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G V++G + DEFA+G + E V +PW + +F+PGGSSGGS+A +A Sbjct: 181 GMVLMGHAHTDEFAIGVATEQ-----VGNPWNT-----EFSPGGSSGGSAALLAARFVPL 230 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + GTDTGGS+R PAS G IKPT+GRCS G+I + D G + R++ D+++LL Sbjct: 231 ATGTDTGGSLRLPASACGITSIKPTFGRCSAYGVIPLTWTRDHPGPMARSIADASLLLGH 290 Query: 235 IAGYD-ECDATCVNLPVPDYERAL-----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 +AG D AT VP L Q + G G+ + D L T+ + + Sbjct: 291 MAGADPNFPATYAAPAVPAEGYPLAATGGAQPLAGRRFGVARR-SADALPATLGTLFGEF 349 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + ++ G ++++SLP A P AE S ++ D L Y Sbjct: 350 LDLVRRLGGTVLDVSLP---IAAPDLLTGDSAEMGSYHRQF-----------SDRLGDYR 395 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTP 407 + G V + L+ D Y+ + + R + + D+ F + +D +L P Sbjct: 396 ----LDNGATVAGTLA----ALAVPSID--YMTSARNRMVYQHDYNRMFADNDLDAVLVP 445 Query: 408 TTPTSAFPLGKEENNSG--SMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLI 464 + K +G G DV N+ G P + PA +P G+Q+ Sbjct: 446 GSKMDG---AKRIEIAGVSVFGGTTGDVRW--ANLTGTPVVCTPAGRSSATGLPFGVQIG 500 Query: 465 GQPFREETLFSV 476 G+P+ E+ L + Sbjct: 501 GRPWDEKGLIEI 512 >gi|121602953|ref|YP_980282.1| allophanate hydrolase [Polaromonas naphthalenivorans CJ2] gi|120591922|gb|ABM35361.1| Ankyrin [Polaromonas naphthalenivorans CJ2] Length = 600 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 128/484 (26%), Positives = 209/484 (43%), Gaps = 60/484 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI-ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + + + R + + +V+ + AI ++ N I+ +A+A A + Sbjct: 8 LGIGSLQQAYRDGAFTPLHMVEQVLAAIGDDPNKAWIHRIDAATLRAQALALMAR----G 63 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + L GIP IKD G+ T A C + P +TV Q+L D GA+ +GK N+ Sbjct: 64 PEGLPLWGIPFAIKDNIDLAGVPTTAGCPDY--AYTPEASATVVQRLLDAGAIAIGKTNL 121 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+FA G + S YG R+ + D + GGSS GS+ +VA + S+GTDT GS Sbjct: 122 DQFATGLNGTRSPYGAC----RNAFNPD-YVSGGSSAGSAVSVALGHASFSLGTDTAGSG 176 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F VG+KP+ G S G++ SLD I T D+ + GYD DA Sbjct: 177 RVPAGFNHLVGLKPSLGLLSTQGVVPACRSLDVVSIFALTADDAQQVFAVAHGYDAQDA- 235 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEIS 303 + P + ++ Q VG+P+ +L + + + + + + GA++VEI Sbjct: 236 -YSRPAQPHGFDFGRAAQ-WRVGVPRAGQLQFFGDSAYARCYADACAHAQALGAELVEID 293 Query: 304 L-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P Q A Y E RY +R + + + V H Sbjct: 294 FEPFAQTARLLY------EGPWVAERYQAIRAFIDARPESVF-------------PVTHE 334 Query: 363 IMI-GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAF 414 I + G L++ + + Y ++R L +R G+D +L PT+PT A Sbjct: 335 ITLGGAKPLAADAFAAQY----RLRALAQR--CAVVWSGIDCMLLPTSPTIHSIQTMLAE 388 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 P+ + + G+ +T VN+ AI+VPA +P G+ + Q +++ L Sbjct: 389 PIARNSD----FGY-----YTNFVNLLDYCAIAVPAGFRPDGLPCGVTFVAQAHQDQPLL 439 Query: 475 SVGQ 478 + Q Sbjct: 440 HLAQ 443 >gi|16263209|ref|NP_436002.1| putative amidase [Sinorhizobium meliloti 1021] gi|14523878|gb|AAK65414.1| Amidase [Sinorhizobium meliloti 1021] Length = 471 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 125/491 (25%), Positives = 212/491 (43%), Gaps = 61/491 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L +++ + +R+++ISAV++ ++ I + + + + A AA + D Sbjct: 1 MTALENLSIRKLAAMVRAREISAVDVTTHFLGRIVAYDDALCGFNVPAPEAALDAAHDLD 60 Query: 61 KRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+A L GIP+ IKD G+ + S G ++TV ++ G ++L Sbjct: 61 TYLNAGGEAGALAGIPLSIKDTADVAGLPSAGASASRSGRTATADATVVARMKAAGGIVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E A G + + P +PW + D+F PGGSS GS VA LC S+ TD Sbjct: 121 GKANCHELAFGGPSFDLPFPPARNPW----NLDRF-PGGSSSGSGVTVAAGLCLGSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSIR PA+ G G+KP + GI A ++D G + RT D+ IL +AG Sbjct: 176 TAGSIRLPATMCGVFGLKPGHDTLPLDGIAVLAATMDHVGPVARTADDTRILFDVMAGRS 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPK-EYRLDYL-SPTIDKTWQQGISWLKDAGA 297 S++G+ +G+P+ E+ + L P + I + GA Sbjct: 236 PGSPFV-------------GSLKGLRIGVPENEWDVGRLIHPDVRAAIDGAIEVARSEGA 282 Query: 298 KIVEISLPHTQ-YALPAYYI----ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 IV + LP + + P + ++ A+S A +D Sbjct: 283 DIVPLRLPSLEDFHAPGTVLMMCEVAAEHAASVRAAWD---------------------- 320 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 FG + R ++G + H R A ++R ++++ +A VD +L P Sbjct: 321 -KFGAIFRARALVGEGIA------VHDFRLAERLRPVLRKRLLDAMSN-VDCLLVPGALA 372 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 PL + + + + + N G PA++ PA MP+G+Q++G P E Sbjct: 373 PPGPLASVD----PFYFMKDPIPNIVANYTGFPALAFPAGFGGDGMPVGVQIMGVPRSEH 428 Query: 472 TLFSVGQIIEK 482 L + + E+ Sbjct: 429 RLLDIAESFER 439 >gi|226314652|ref|YP_002774548.1| amidase [Brevibacillus brevis NBRC 100599] gi|226097602|dbj|BAH46044.1| putative amidase [Brevibacillus brevis NBRC 100599] Length = 494 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 139/514 (27%), Positives = 224/514 (43%), Gaps = 83/514 (16%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ +E +R + ISA E + I + N ++NA + + A AA+++D Sbjct: 1 MNELTYLTATELGTWIRERKISAEEATRHIFKRINSLNGKVNAIVAYDEKGAFQAAKQAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K I G R L G+PI IKD FAT G+ T + L G+ P ++S + +L GA++L Sbjct: 61 KEIGEGIYRGPLHGVPITIKDSFATAGLATTSGFPPLKGYIPQHDSAIVSRLKQAGAIIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ M + YG +PW +T SSGGS+AAVA L IG+D Sbjct: 121 GKTNVPPLLMDMQTDNDIYGRTNNPWNLERTTGG-----SSGGSAAAVAAGLSYLDIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQA--------GIITRTVRDSAI 230 GGS+R PA F G + +KPT G SR + F + D G I R++ D + Sbjct: 176 IGGSLRVPAHFCGVLSLKPTEGSVPSRGHMPGFEGTADYTSSRHLACYGPIARSIEDLEM 235 Query: 231 LLKAIAGYDECDATCVN----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 I+G +A + LP P E+ L G P S I + Sbjct: 236 AFSIISG-GNGNAGLPHGPQVLPPPLKEQPLHIRWMEELPGYPT-------SRAIRNQLR 287 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + + L+ G + +++ P P +A R GK +++ Sbjct: 288 RFVKVLEQQGMHVEQVTAP-------------PLDA----------RKAWETWGK-MIDA 323 Query: 347 YENTRSIGFGQEVKHRIMIGTY-------VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 N+ + + + H + + Y +L + +Y+R IR + R F E F Sbjct: 324 ELNSTTPPLIRGLAHLMTMPIYRQLPTATMLIPLTF-KNYMRVLTIREQLIRSF-EQFMA 381 Query: 400 GVDVILTPTTPTSAF-----------------PLGKEEN--NSGSMGHIYNDVFTVAVNM 440 D+ L P + T+AF PL +EN N + Y ++F N+ Sbjct: 382 DCDLFLCPVSCTTAFPHMEKSKMWGYKPLYTKPLYVDENPQNYWAATTFYTNLF----NV 437 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G P +++P E+ +P+G+Q +G+ +R+ L Sbjct: 438 TGSPVVTMPIGFDEQGLPIGIQCVGKRWRDRELL 471 >gi|159131781|gb|EDP56894.1| amidase [Aspergillus fumigatus A1163] Length = 505 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 133/524 (25%), Positives = 231/524 (44%), Gaps = 68/524 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + VSE D LR + + E+V +Y+ I NS + A I V + A A + D+ Sbjct: 8 DIQELTVSEYHDALRDRRTTCTEVVVAYLDRISRYNSLLKALI-TVNKNALDVARQRDQE 66 Query: 63 ---IINGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 ++ +D L G+P+ +KD ++T + T + L + ++ V KL Sbjct: 67 TEALLQQHGKDHTLPPLHGVPVILKDTYSTLDMPTTSGVKALHSLQTKADAFVVTKLRRA 126 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GA++LGK N+ E ++ +S G +P+ + TPGGSSGG++AA+A L Sbjct: 127 GAIILGKANLHELSLEGVTVSSLGGQTRNPYDL-----RRTPGGSSGGTAAALAANLALV 181 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 G DT S+R PAS +G +PT G+ SR GII + D AG + RTV+D +L Sbjct: 182 GCGGDTMNSLRSPASACSIIGFRPTRGQISRRGIIPVTDTQDVAGPMARTVQDVRLLFDV 241 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + G D D + ER+ + + +G+ + + D P Q + L Sbjct: 242 MKGEDAGDEVTTDCQRDAMERSSETCGRRKRIGVLRSFFADDGDPEGSIVNQTVLDALDK 301 Query: 295 AGAKI-VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 A A + VE+ Q A++ I +++++ Y E + +++ + + I Sbjct: 302 ARANVPVELVTLSPQR---AHWDIPTLISTADMQAY---------EFRSVIDTFLQSSLI 349 Query: 354 GF------------GQEVKHRIMI---------GTYVLSSRCYDSHYLRARKIRTLIKRD 392 F G+ ++ + G Y + S Y+S R I L K+ Sbjct: 350 AFTPHDSLNSIVASGEYLQEAVTPALYRTLQKDGPYTMQSPEYES---RLATIAAL-KKS 405 Query: 393 FTEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 + FE+ +D ++ P P+ GSM + A + G PAI +PA Sbjct: 406 VEDCFEEHQLDALVYPHQRQLVAPI-------GSMVQPRRNGILAA--LTGRPAICLPAG 456 Query: 452 LCEKK------MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + +P+GL+L+G+P+++ L + + E+ RP Sbjct: 457 FSPQTESAPQGVPIGLELMGKPWQDVDLLDIAEQFERVIQGRRP 500 >gi|324504454|gb|ADY41924.1| Fatty-acid amide hydrolase 2 [Ascaris suum] Length = 554 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 118/506 (23%), Positives = 210/506 (41%), Gaps = 47/506 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ +++ D +R++++++ ELV++YI IE N +NA +E + AR A E D Sbjct: 72 LLLISATQAADMIRTRELTSEELVEAYISRIEQINGIINAVVEKNYENARCLAREVDAIF 131 Query: 64 INGD-----------ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 N ++ L G+P IKDC G+ ++ V Q++ Sbjct: 132 DNLQMGSERYNELVASKPLLGVPFTIKDCIEVDGLRCTIGITSRKDLVAEKDAAVVQRMR 191 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GA+ L N+ E M + + +G +P+ T + T GGSSGG +A ++ Sbjct: 192 SAGAIPLAVTNVPEVCMWWESVNAIHGRSSNPY----DTRRIT-GGSSGGEAALISAAGS 246 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII----SFAPSLDQAGIITRTVRDS 228 +G+D GGSIR P+ F G G+KPT G G + F + + G I R D Sbjct: 247 VIGLGSDIGGSIRMPSYFNGVFGLKPTSGIVPLTGHLPPTEGFRTEMLRIGPICRYAEDL 306 Query: 229 AILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTV----GIPKEYRLDYLSPTIDKT 284 I+LK +A + D + PV +++ M + G+ Y S D Sbjct: 307 IIMLKVMAAEESVDLLQLEKPV---------NLRKMRLFYMEGLKTPYAQSISSECYDAL 357 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDI 343 + + + + LP YA+ + + + A + ++ L G+ + Sbjct: 358 KRAVRYFETKYDLCAIRLDLPFAHYAVEFFLTSIEVPGAPSFAHHMTDLKSELNCLGELV 417 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + +R I+ G S D +R + R+ E + + Sbjct: 418 KWCFRRSR------HTFPAIITGILDRQSPFNDEQKKVLMSLRDRLNRELRELLQDDA-I 470 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 ++ P+ PT+A + + N +T N +P + P L ++ +PLG+Q+ Sbjct: 471 LIFPSFPTTA------PYHHQPLLTPLNFAYTALWNTLAMPVVQCPMGLNKRGIPLGVQV 524 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 +G P + L +V Q +E G +RP Sbjct: 525 VGAPATDRLLIAVAQDLEDGFGGWRP 550 >gi|289646897|ref|ZP_06478240.1| amidase family protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 507 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 131/483 (27%), Positives = 225/483 (46%), Gaps = 42/483 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + +E R + +K IS VEL+D+ I+ IE+ N ++NA+ ++AR A ++ ++ G Sbjct: 11 SATELRALIGNKQISPVELLDACIERIESLNPKINAFAATCFKRARDEALLAEHAVLQGK 70 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+PIGIKD T G+ T S + P ++ +L GA+++GK N+ E Sbjct: 71 PLGLLHGLPIGIKDLEETAGVLTTYGSQLFRDNIPAQDNLFVARLRAAGAIVVGKTNVPE 130 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 G++ +G +P+ + GGSSGGS+AA+A + G+DTGGS+R Sbjct: 131 LGAGANTRNVVWGATGNPFNP-----ELNAGGSSGGSAAALAVDMVPLCSGSDTGGSLRI 185 Query: 187 PASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG++P+ G S + + P + G + R V D+ + L+A AG + D Sbjct: 186 PAALCGIVGLRPSPGLVPSERKKLGWTP-ISVVGPMGRNVADTLLQLRASAGLGQSDPLS 244 Query: 246 VNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + ++ R +D + + VG +++ + TI +++ I+ L+ I L Sbjct: 245 YAIADDEFAPRTVD--LGQLRVGYSEDFGACAVDDTIRAVFREKINALRPLFKSCEAIDL 302 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRI 363 + A + ++ R + GL+ +D + NTR+ Sbjct: 303 -----------NLGSAHRTFDVLRAEAFVAGLQDAHDRDPDALGPNTRA---------NF 342 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEE 420 +G + C +H ++R I R F + FE D+IL PTTP S FP L E Sbjct: 343 EMGAAMSLQDCVKAHGEQSR-----IFRGFQKQFEH-YDLILAPTTPVSPFPWSELYLRE 396 Query: 421 NNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N + + Y + + + PA+S+P MP GLQ+IG + L + + Sbjct: 397 VNGVPLDNYYRWLALCYTITLTTNPALSLPCGTDHNGMPFGLQVIGGFRGDAKLLACAEA 456 Query: 480 IEK 482 +E+ Sbjct: 457 LEQ 459 >gi|326405249|ref|YP_004285331.1| putative amidase [Acidiphilium multivorum AIU301] gi|325052111|dbj|BAJ82449.1| putative amidase [Acidiphilium multivorum AIU301] Length = 453 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 17/235 (7%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD F G T+A S +L G P + + +L G V +G+ NM EFA Sbjct: 77 GIPIAVKDLFDMAGQETRAGSKVLAGCGPAAQDAPAIARLRRMGFVPIGRTNMTEFAYSG 136 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +YG + WR ++ PGGSS GS+ AVA + A IGTDTGGS R PA F Sbjct: 137 IGTNPHYGTPPARWRR---EERRIPGGSSSGSAVAVAAGMAHAGIGTDTGGSCRIPAVFN 193 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG KPT R R G++ + SLD G + R+V A+L +AG E P P Sbjct: 194 DLVGFKPTARRIPREGVVPLSSSLDSVGPLARSVGCCALLDSIMAGTPEAP------PAP 247 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + G+ + +P++ LD L + + + L AGA+I I++P Sbjct: 248 -------AELAGLRLAVPRDVALDTLDDEVAAGFDAALRRLSAAGARIETIAMPE 295 >gi|226225509|ref|YP_002759615.1| putative amidase [Gemmatimonas aurantiaca T-27] gi|226088700|dbj|BAH37145.1| putative amidase [Gemmatimonas aurantiaca T-27] Length = 553 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 8/232 (3%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKD 80 +AVE+ + + ++ ++A I+++A A A SD R+ R L+G+P+ K Sbjct: 69 TAVEITTRALDRCRSLSTTLHA-IDLLADSALEEARASDARLRQRALRGPLDGVPLFAKS 127 Query: 81 CFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 + KG+ T A S P ++ Q+L GAV+LGK D+FA + +S Sbjct: 128 IYDMKGLPTTASSAAWAQLFPQVVQRDALEVQRLRAAGAVLLGKTVADDFAYRGNGTSSL 187 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G V +P D TPGGSS GS+ VA A++GTD GGS R PA F+G VG+K Sbjct: 188 SGQVRNP---HDQAGLRTPGGSSAGSAVVVACGAAFAALGTDDGGSNRIPAQFSGVVGVK 244 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 PT+G R G+I P LD G + R+V D+A++L AIAG D D + P Sbjct: 245 PTFGLVPRTGVIPTWPVLDTHGPLARSVADAALMLDAIAGPDASDGLALTTP 296 >gi|170749619|ref|YP_001755879.1| amidase [Methylobacterium radiotolerans JCM 2831] gi|170656141|gb|ACB25196.1| Amidase [Methylobacterium radiotolerans JCM 2831] Length = 478 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 132/483 (27%), Positives = 202/483 (41%), Gaps = 46/483 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L M E S +S VE + + IE N Q+NA+ V + A AA S+ Sbjct: 9 TDLGEMDAVELGALFASGRVSPVEAAQAALARIERFNPQVNAFAYVAPEPALEAARASEA 68 Query: 62 RIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+A ++G+P IK+ A KGI + S + E V ++L GAV+LG Sbjct: 69 RWAKGEALSPIDGVPTTIKELTAVKGIPWRRGSKLTGEAPATDEILVMRRLRAAGAVILG 128 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 EF +G ++PW TD+ + G S G AA + G+D Sbjct: 129 TTTSPEFGWKGVTHGPAFGNTVNPW----GTDRASGGSSGGAGVAAALN-MGVLHEGSDG 183 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA--GIITRTVRDSAILLKAIAG- 237 GSIR P+SF G GIKPT+G L + P D A G +TRTV DSA+ L A+ G Sbjct: 184 AGSIRIPSSFCGVFGIKPTFG---WLATDAPTPLRDMAHRGPLTRTVADSALFLNAVTGP 240 Query: 238 -----YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 Y +C + PVPD+ A + G+ +G + + + P + + Sbjct: 241 SPDGLYGDCPS-----PVPDWTEAARGGVAGLRIGYSRTFGYARVDPEVAAA-VDRAAAR 294 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 A +VE + P L A +I + + + R+ E Sbjct: 295 LAAMGAVVEEADPGFASPLEALRVIWFSAMAVLVDRFAPT------------ETDRARMD 342 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GF + + R + L A ++R +K F D++L+PT P + Sbjct: 343 PGF---------VAVAEIGRRTSAADLLAAEQVRAELKVTMAR-FHARYDLLLSPTMPVT 392 Query: 413 AFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 A P G + M + FT NM G A+SVP +P+GLQ++ FR++ Sbjct: 393 AIPAGIDFPEGQGMTDWTDWSPFTYPFNMTGQAALSVPCGFDSGGLPIGLQMVAARFRDD 452 Query: 472 TLF 474 + Sbjct: 453 LVL 455 >gi|85716667|ref|ZP_01047636.1| amidase [Nitrobacter sp. Nb-311A] gi|85696507|gb|EAQ34396.1| amidase [Nitrobacter sp. Nb-311A] Length = 449 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 144/288 (50%), Gaps = 19/288 (6%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIK 79 +A +LVD + I + + +I+ A AAA+ DK R ++ GIP+ IK Sbjct: 20 TARKLVDDCLAKIADKAGEGARVFIQADADGTIAAADAMDKLREVSAAPSPYAGIPVSIK 79 Query: 80 DCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F +G ++A S L P ++ V +L G V++G+ NM EFA +Y Sbjct: 80 DLFDVEGQVSRAGSLTLKDAPPAAKDAPVVARLRRAGFVVIGRTNMTEFAYSGLGINPHY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PWR + PGGSS G++ ++ + ++GTDTGGS R PA++ G VG KP Sbjct: 140 GTPKNPWRR---DIGYVPGGSSSGAAVSITDGMAYGALGTDTGGSCRIPAAYCGIVGYKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T R G I + +LD G I R+V A+L DA P+ + + Sbjct: 197 TARRVPLDGGIPLSVTLDSYGPIARSVGCCAVL----------DAVLTGEPI---AQVVP 243 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + ++G+ + +P LD L+P + + +++ + L DAGA I I++P Sbjct: 244 RPVRGLRLAVPTTVMLDDLNPAVARAFERALDRLADAGALIDHIAVPE 291 >gi|27378071|ref|NP_769600.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27351217|dbj|BAC48225.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium japonicum USDA 110] Length = 449 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 121/414 (29%), Positives = 187/414 (45%), Gaps = 47/414 (11%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGF-RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI IKD F KG T+A S LD +++ ++L G V++G+ NM EFA Sbjct: 73 GIPISIKDLFDIKGQVTRAGSRALDDSPAAEHDAATVERLRKAGFVLIGRTNMTEFAYSG 132 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +YG +P + + + PGGSS G++ +V + ++GTDTGGS R PA+F Sbjct: 133 IGINPHYG---TPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIPAAFN 189 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KPT R G + + SLD G + R+V AIL DA N PV Sbjct: 190 GIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAIL----------DAVLANEPVV 239 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + ++GM + +P LD L + +T+++ + L D GA I I + Sbjct: 240 ALR---PRPVKGMRLAVPTTIALDDLDKAVAETFERALKTLADHGAIIERIEMAE----- 291 Query: 312 PAYYIISPAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 ++ I P A A Y RY + +G ++Y+ S+ RIM G Sbjct: 292 --FHDIGPMNAKGGFAASESYAWHRYLITTKG----DVYDPRVSV--------RIMRGEA 337 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMG 427 ++ D L R R+LI R A D ++ PTT + + ++ + + Sbjct: 338 QSAADYID--LLNER--RSLIAR--VNAHIAPYDALVLPTTANTPPKIADLADDKAFTTQ 391 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ +NM AIS+PA E +P+GL L G + +F + +E Sbjct: 392 NLRALRNCTLINMIDGCAISLPAHR-EGDVPVGLMLAGAGGSDRRIFELAAGME 444 >gi|67904674|ref|XP_682593.1| hypothetical protein AN9324.2 [Aspergillus nidulans FGSC A4] gi|40747235|gb|EAA66391.1| hypothetical protein AN9324.2 [Aspergillus nidulans FGSC A4] gi|259488159|tpe|CBF87402.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 563 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 132/479 (27%), Positives = 210/479 (43%), Gaps = 87/479 (18%) Query: 71 LEGIPIGIKDCFATKGIHTQ----ACSHILDG-FRPH-YESTVTQKLWDNGAVMLGKLNM 124 L G + +KD + G+ T A H G ++P ++TV ++L+ GA + G Sbjct: 98 LAGRTVVVKDNVSVAGLPTTLGIPAWLHSKAGEYQPSPIDATVVRRLFFAGATLKGTAVC 157 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA---------------- 168 + ++ + TS G V +PW T GGSS G +A + Sbjct: 158 ESYSAAPVSFTSATGAVHNPW-----ARGHTAGGSSSGCAALIGQRAVLKESGSAINGPH 212 Query: 169 --GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 ++G D GGSIR PA++TG G+KPT+G G +S P +D G + + Sbjct: 213 QGSPTVELAVGGDQGGSIRVPAAYTGVYGLKPTHGLVPYTGAVSLTPMIDHLGPMATKIE 272 Query: 227 DSAILLKAIAGYDECDATCV-NLPVP----DYERALDQSIQG----------MTVGIPKE 271 D A++LK +AGYD D+ P+P DY + I+ M VG+ +E Sbjct: 273 DIALMLKVMAGYDGLDSRMTPESPMPGQVKDYPSLVADFIKSAKSTTLQKPVMKVGVLRE 332 Query: 272 -YRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 + LS + D Q ++ AGA I+E+S+P + A PA + ++ AR Sbjct: 333 AFDFPGLSAEVRDTVLQNAKAYFSAAGADILEVSVPMHREA-PAIWTVA--------ART 383 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGF--GQEVKHRIMIGTYVLSSRCYDSHYLRA----- 382 YGL ++ L + + QE+ + G + + + + YLR Sbjct: 384 SLADYGLAMKPPGYLSYAPDHIDTQWPPTQEMYDYLSAGNPTIMNLIFSTDYLRETFGTS 443 Query: 383 ------RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL------GKE-----ENNSGS 425 RK+ L R +A VDV++TPT PT AF G E E + + Sbjct: 444 VEFKGHRKVFEL--RAAYDAVLSDVDVLITPTVPTVAFEFPSSTKGGTEWGDIGERVTAA 501 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALC---EKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G YN T N+ G PA++VP L KK+P+G+Q+IG+ + +E + + E Sbjct: 502 VGLSYN---TCPFNVTGHPAMNVPCGLGGSDGKKLPIGMQVIGKRWDDEAVLKAAALFE 557 >gi|134101556|ref|YP_001107217.1| amidase [Saccharopolyspora erythraea NRRL 2338] gi|133914179|emb|CAM04292.1| putative amidase [Saccharopolyspora erythraea NRRL 2338] Length = 483 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 144/509 (28%), Positives = 226/509 (44%), Gaps = 47/509 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E +F E LR+ +++VEL D I IE + +NA +ARAAA +D+ Sbjct: 2 EWSFQTAEELVAALRAGAVTSVELTDEAIARIERDDEVINAICVPDFDRARAAAHRADQA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ R L GIP+ +K+ + G+ T + P ++ +L GAV+LGK Sbjct: 62 RARGEDRPLLGIPVTVKESYNIAGLPTTWGMPPHRNYMPAEDAVQVSRLKAAGAVVLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ + YG +PW D+ TPGGSSGGS+AA+A A SIG+D G Sbjct: 122 NVPLGLQDVQSFNEIYGTTTNPW----DHDR-TPGGSSGGSAAALASGFGALSIGSDIAG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPSLDQA--GIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G++ + LD A G + RT RD +LL + Sbjct: 177 SLRTPAHFCGVYAHKPTLGLAANRGMVPPSEPALPADLDLAVVGPMARTARDLTLLLDVM 236 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D A + LP +ER D V + E+ L + + + L Sbjct: 237 AGPDPLTFGVAHRLALPPARHERLCD-----FRVLVLDEHPLIPTGSAVRAGVNRVAAAL 291 Query: 293 KDAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 D GA++ S LP Y + S ++AR+ +E +E Sbjct: 292 VDGGARVERHSPLLPGLTEGATLYMRLL---ISGSVARFP-------------IESHEQL 335 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ G + + + + ++ A R L + + + F + D ++ P TP Sbjct: 336 RTRAAGLSADDQSLDAVRLRAMVSSHRDWIEANNRRELHRHSWRQLFAE-FDAVVCPITP 394 Query: 411 TSAFPLGKEEN------NSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 T AFP N + + + Y D V+ M GLPA ++PA + +P+G+Q Sbjct: 395 TPAFPHDHNPNPLERRIDIDGVEYPYFDQLVWAGLATMPGLPATAIPAGRSPEGLPVGVQ 454 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRPHK 491 LIG F + T + +++E++ G F+ K Sbjct: 455 LIGPMFEDRTPLRLAELLEQKTGGFQAPK 483 >gi|134096406|ref|YP_001101481.1| putative amidase [Herminiimonas arsenicoxydans] gi|133740309|emb|CAL63360.1| Putative amidase [Herminiimonas arsenicoxydans] Length = 437 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 130/470 (27%), Positives = 206/470 (43%), Gaps = 61/470 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++ +++ E RL +++SA + + I IE ++A+ +A A A D Sbjct: 1 MNDFPDLSLQELAARLARREVSAETVARASIARIEEMEPAVHAWQHFDPAQAIAQARRLD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L G+PIG+KD T + T S I G +P ++ + GAV++G Sbjct: 61 AQAPGGA---LHGVPIGVKDLMDTADMPTTYGSPIYAGHQPQTDAICVAACRNAGAVIMG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF---TPGGSSGGSSAAVAGFLCAASIG 177 K EFA T + GP +P R+ + TPGGSS GS+AAVA + + G Sbjct: 118 KTVTTEFA------TFHPGPTCNPHRTHKADGTLQVHTPGGSSSGSAAAVACGMVPVAFG 171 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T T GSI +PA++ G VG KPTYG GI S +PSLD G++ R+V D+A + Sbjct: 172 TQTAGSIVRPAAYCGVVGYKPTYGMLPLAGIKSLSPSLDTVGVLARSVGDAAFFI----- 226 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 T LP+ ++ +GI + D S ++ +S L+ AGA Sbjct: 227 -----GTLSRLPLSPLPAVAQTRLR---LGICRTQHWDRASHDARTALERAVSLLEAAGA 278 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN--TRSIGF 355 ++ ++SLP L +EA + ++ E + + + N R I Sbjct: 279 RLSDVSLPDQCKGL--------SEAQMRIMGFEAA-LAFAPEAQANPDGFSNAFVRFIAA 329 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G + + Y A+++ + T F VD++L P+T A P Sbjct: 330 GNAID---------------GATYFAAQELAVAARCALTGIFND-VDILLAPSTEGVA-P 372 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 G E I+N ++T + G P + VP MP+G+ LIG Sbjct: 373 AGLEATGD----PIFNRMWT----LLGNPCVHVPLGTGAGGMPIGVTLIG 414 >gi|300783147|ref|YP_003763438.1| amidase [Amycolatopsis mediterranei U32] gi|299792661|gb|ADJ43036.1| amidase [Amycolatopsis mediterranei U32] Length = 519 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 229/504 (45%), Gaps = 36/504 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + R+ S ++A L Y+ I + ++NA + + AAE +R Sbjct: 32 DLDSADIPALQARMASGRLTAAGLTRLYLDRIHRIDGKVNAVLALNPSSLGQAAESDARR 91 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + L+GIP+ +KD T+ T A S L + P ++T+ +L GAV+LGK Sbjct: 92 RAHRLRGPLDGIPVLVKDNVDTRDQWTTAGSRALRSY-PAADATLITRLRAAGAVILGKA 150 Query: 123 NMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ E+A ++ TS + V + D+ P GSS GS+A VA L +IG++T Sbjct: 151 NLSEWANFRAAKPTSGWSGVGGQTNNPYVLDR-NPCGSSAGSAAGVAASLAQVAIGSETD 209 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA T TVG KP+ G SR G++ + D AG I R V D A+ L + G D Sbjct: 210 GSIVCPAGMTATVGHKPSLGLVSRTGVVPISAEQDTAGPIARNVVDVALTLSVLQGRDPA 269 Query: 242 DATCVNLP---VPDYERALDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + P +Y + L + +G +G+ +RL L P D + L AGA Sbjct: 270 DPATLTYPRTQPANYAKFLRPGVLRGARIGL---WRLPVLGPATDAIMTSARNSLVKAGA 326 Query: 298 KIVEISLPHT----QYALPAYYIISPAEASSNLA-RYDGVRYGLRVEGKDILEMYENTRS 352 +VE+SLP+ + PA + + LA R G R + + + E T Sbjct: 327 TVVEVSLPYQARLGELEFPALLTEFHRDIDAYLATRPSGPRNLAELIAYNRADPLEQT-- 384 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQ-GVDVILTPTTP 410 GQE+ + + + D YL AR ++ L +R E G+D I +PT P Sbjct: 385 CFAGQELFEQALA-----APPPTDPGYLAARAELSDLARRSLDETLAAYGLDAIASPTNP 439 Query: 411 TSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P K + G +DV + +AG P ++VPA +P+G+ +G + Sbjct: 440 ----PAWKTDCAVGD-----DDVIPSSTPAAVAGYPDVTVPAGFA-GPLPVGISFMGARW 489 Query: 469 REETLFSVGQIIEKEAGYFRPHKW 492 + + ++ E+ A P ++ Sbjct: 490 SDARMLALAADFERVAPARVPPRY 513 >gi|158318632|ref|YP_001511140.1| amidase [Frankia sp. EAN1pec] gi|158114037|gb|ABW16234.1| Amidase [Frankia sp. EAN1pec] Length = 484 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 137/481 (28%), Positives = 227/481 (47%), Gaps = 41/481 (8%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 RL + +S+ ELV + ++ IE +++ +N + + A++A A AEE+D+R+ G+ L G+ Sbjct: 26 RLAAGSMSSRELVAACLERIEATSTTLNTFRVLRAEEALAEAEEADRRLDAGERLPLLGV 85 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ IKD G+ T + F P E + ++L GA+++GK N EF Sbjct: 86 PVAIKDDTDMAGLPTAFGAA--GDFPPATEDCEMVRRLRATGAIIVGKTNTPEFGQWPFT 143 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E + +G +PW ++D ++PGGSSGG+++AVA L A+IG+D GS+R PA++T Sbjct: 144 EGAAFGATRNPW-NLD----YSPGGSSGGAASAVAAGLVPAAIGSDGAGSVRIPAAWTHL 198 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VGIKP GR S + L G +TRTV D A LL ++G D P + Sbjct: 199 VGIKPQRGRISSAPVTEQFNGLTTFGPLTRTVADGAFLLDLLSGSLPVDRDRPPAPTETF 258 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-HTQYALP 312 R+ + + +G+ +S +D + + L + A++ +P Y L Sbjct: 259 LRSAEHPPPRLRIGLSLRVPYSGMSAALDPAVRAAVERLAEVLARLGHDVVPVEPPYGLL 318 Query: 313 AYYIISPAEASSNLARYDGVR-YGLRVEGKDILEMYENTRSIGFGQEVKH-RIMIGTYVL 370 + DG+R + RV ++L + R++ + + R ++G Sbjct: 319 GLLFLP--------RSMDGIRDWSHRVPNPELL----DPRTVANARNGRALRPVLGL--- 363 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENNSGSMG 427 +R + R I R F + VDV+L PTT P L +E N Sbjct: 364 -ARAAEG------PARAWIGRVF-----RTVDVLLAPTTAVPPPRVGELNRETNWETDQA 411 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 + +T N+ G PA++VPA L +P+G QL+G E L S+ +E ++ Sbjct: 412 IVAACPYTWPWNVLGWPAVNVPAGLTPAGLPVGAQLMGPAGGEGPLISLAAELEDVERWY 471 Query: 488 R 488 R Sbjct: 472 R 472 >gi|15920693|ref|NP_376362.1| enantiomer-selective amidase [Sulfolobus tokodaii str. 7] gi|15621476|dbj|BAB65471.1| 396aa long hypothetical enantiomer-selective amidase [Sulfolobus tokodaii str. 7] Length = 396 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 131/468 (27%), Positives = 211/468 (45%), Gaps = 85/468 (18%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 ++E N++ N +I + K R DK G RDL+ GIKD TKG+ T A Sbjct: 3 MSLEELNTKYNIFITISRMKYR------DK----GKLRDLK---FGIKDIILTKGVRTTA 49 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL F P + + K+ G ++GK N EFA+G++N +S GP +P+ Sbjct: 50 GSKILKDFIPSENAYIVDKILAEGGEIIGKTNTHEFAIGATNTSSLIGPAKNPYDP---- 105 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + GGSSGGS+ AVA L IGTDTGGS+R PAS G +G KPTYG G+I F Sbjct: 106 -ERISGGSSGGSAVAVALGLVDVGIGTDTGGSVRIPASLCGVIGFKPTYGIIPTDGVIPF 164 Query: 212 APSLDQAGIITRTVRDSAILLKAIA-------GYDECDATCVNLPVPDYERALDQSIQGM 264 + + D G + + + ++A+A Y + T DYE + Sbjct: 165 SWTFDTIGFLAKDISLIRRTIEALAENKIPFISYSKRRPTLGLFLFGDYETS-------- 216 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 L P I+K +S D E+ + H++ I+ AEASS Sbjct: 217 ----------KALEPVINK-----LSSYFDLVQIENELLIKHSRIVRKT---IALAEASS 258 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 +Y Y+ + + + +V+ I G +L+ + Y+ + + Sbjct: 259 YHMKY-----------------YDKYKDL-YSSDVRKLIEEGFKILA-----TDYVNSLR 295 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTT----PTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 IR ++ ++ F++ +D +++PTT P +G E S+ I N T N Sbjct: 296 IRKVLLEEYFSIFKK-IDALISPTTRIVAPKIQEVIGNELKYRDSL--IAN---TEIFNT 349 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 G P+IS+P +P+GL + G+P+++ T+ + + I G+ + Sbjct: 350 LGAPSISIPVTKLN-DLPVGLMISGEPYKDGTVLDIAEEIMGIVGFIK 396 >gi|296274229|ref|YP_003656860.1| allophanate hydrolase [Arcobacter nitrofigilis DSM 7299] gi|296098403|gb|ADG94353.1| allophanate hydrolase [Arcobacter nitrofigilis DSM 7299] Length = 598 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 126/483 (26%), Positives = 216/483 (44%), Gaps = 71/483 (14%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V+E +R++ + + + ++QAIE+ +Q+++ E +N Sbjct: 26 VTEVYNRIKKVNDDGIFI---HLQAIEDIFAQISSLEE-----------------MNLSE 65 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE------STVTQKLWDNGAVMLGKL 122 + L GIP +KD +GI T A P YE + + + L GA+ +GK Sbjct: 66 KPLWGIPFTVKDNIDVEGIPTTAAC-------PAYEYIAKEDAFIVKVLKQAGAICIGKT 118 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+D+FA G + YG +P ++D +K PGGSS GS+ AV+ L + S+GTDT G Sbjct: 119 NLDQFATGLVGIRTPYG---APKNALD--EKIIPGGSSCGSAVAVSHQLFSFSLGTDTAG 173 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S R PA+ VG+KPT G S+ G++ ++D + + D+ + + + +DE D Sbjct: 174 SGRIPAALNNLVGLKPTLGAFSKRGVVPACLTVDTVSVFALNIEDAYDIFEIASKHDEKD 233 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVE 301 P Y + Q + V IP ++ I K++Q+ IS +K+ G K +E Sbjct: 234 PYSKKRPKNKY-----KDTQNVVVAIPNSKSQIFIDDEIQRKSYQETISLIKEKGFKTIE 288 Query: 302 ISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 I L P + A Y E + RY + ++ + DIL++ TR++ E Sbjct: 289 IDLKPFFEVAQLLY------EGTWLAERYTVIGDMIKNQPADILDI---TRTLIQKAE-- 337 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 T+ S D + +K++ EQ D++ P+ P A E+ Sbjct: 338 ------TFSASDVYRDIYRFNE------LKKEIEPVLEQ-FDILCLPSMPRVASVKEIED 384 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + + ++T VN+ L AI++P E G+ +I F E L + I Sbjct: 385 DPIKANSRL--GIYTNFVNLLDLSAIAIPVNKREDGFAGGVTIIANAFEELKLAKFAKYI 442 Query: 481 EKE 483 +K+ Sbjct: 443 QKD 445 >gi|228965081|ref|ZP_04126178.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar sotto str. T04001] gi|228794625|gb|EEM42134.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar sotto str. T04001] Length = 433 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 131/437 (29%), Positives = 192/437 (43%), Gaps = 61/437 (13%) Query: 71 LEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK NM E A Sbjct: 22 LHGIPVLVKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKTNMTELAN 81 Query: 130 GSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S + ++ G I+P+ + D GGSS GS+ AVA SIGT+T SI Sbjct: 82 AMSFKMWAGYSARGGQTINPYGT--GKDGMFVGGSSTGSAIAVAANFTVVSIGTETDASI 139 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA VGIKPT G SR GII F S D AG RTV D+AILL ++ G DE D Sbjct: 140 LSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDVA 199 Query: 245 CVN---LPVPDYERALDQS-IQGMTVGI----PKEYRLDYLSPTID-KTWQQGISWLKDA 295 PDY LD + + G +G+ PK+Y Y + D K +++ I L++ Sbjct: 200 TRKSEGRAYPDYTSYLDANGLNGAKIGVFNDAPKDY---YENGEYDEKLFKETIQVLRNE 256 Query: 296 GAKIVEISLPHT-----QYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYE 348 GA +VE H+ + +P Y E +L Y + + V +++E Sbjct: 257 GAAVVENIDIHSFHREWSWGVPLY------ELKHSLDNYLSKLPSTIPVHSISELMEFNA 310 Query: 349 NT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 N R++ +GQ R + + YL AR D + EQG+D L Sbjct: 311 NIAERALKYGQTKLER----RKDFPNTLRNPEYLNAR------LEDIYFSQEQGIDFALE 360 Query: 407 PTTPTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + FP + + + AG P+I++PA E P G+ + Sbjct: 361 KYNLDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMESGRPFGITIAS 405 Query: 466 QPFREETLFSVGQIIEK 482 F E L + E+ Sbjct: 406 TAFSEGILIKLAYAFEQ 422 >gi|254512881|ref|ZP_05124947.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodobacteraceae bacterium KLH11] gi|221532880|gb|EEE35875.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodobacteraceae bacterium KLH11] Length = 549 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 133/498 (26%), Positives = 218/498 (43%), Gaps = 62/498 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F ++ + ++ I++ +L + Y+Q I N ++ + V + A A+ D Sbjct: 89 DIAFAPLTHLSHWIATQQITSRQLTELYLQRIATLNPELQCFATVTETEPLAEADAMDAL 148 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G + L GIP +KD F TKG+ T + P ++ VT +L GAV+LGK Sbjct: 149 TRAGKSLGPLHGIPYALKDLFDTKGVATGWGAEPFQDRIPDEDAEVTSRLRAAGAVLLGK 208 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + A G + Y G +PW + + SS GS++A A LC SIGT+T Sbjct: 209 TTLGALAYG---DLWYGGRTRNPWNLNEGSSG-----SSAGSASATAAGLCGFSIGTETL 260 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+ GT G++PT+GR SR G ++ + S+D+ G I R V D+A++L A+ GYD Sbjct: 261 GSIVSPSQRCGTTGLRPTFGRVSRKGAMALSWSMDKVGPICRGVEDTALVLAALNGYDPA 320 Query: 242 DATCVNLPVPDYERALDQS--IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D ++ P A D + I GM VG E +T ++ ++ G + Sbjct: 321 DLCSISAPF-----AFDATSDIDGMVVGFLPE----AFGEGATETDHAALNAVRALGLTV 371 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN------TRSI 353 E++LP YA + I AEA+ A ++ + R D+L E+ R Sbjct: 372 REVTLPDLPYA--SLINILYAEAA---AAFEDLTLSDR---DDLLSWQEDGAWPNTMRKA 423 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 F V H + ++R + ++ Q +DV++ P T Sbjct: 424 RFLSAVDH------------------VNLDRLRYRVMQEVNRMMGQ-IDVLIGPAT---T 461 Query: 414 FPLGKEENNSG-SMGHIYNDVFTVAVNMAGLPAISVPAALCEK-----KMPLGLQLIGQP 467 P+ N +G H+ V + G P K+P+G+ L GQ Sbjct: 462 GPMLVASNFTGHPCLHLRAGFENVCSRLPGTLGNRAPGGPAATDGPAFKVPMGISLWGQL 521 Query: 468 FREETLFSVGQIIEKEAG 485 F E + ++G +E+ G Sbjct: 522 FDEGPMLALGMALERALG 539 >gi|94969321|ref|YP_591369.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Candidatus Koribacter versatilis Ellin345] gi|94551371|gb|ABF41295.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase [Candidatus Koribacter versatilis Ellin345] Length = 536 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 112/314 (35%), Positives = 170/314 (54%), Gaps = 22/314 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEES 59 EL + V+E ++ LRS ++V L SY++ A+++S ++N+ IE+ + AA Sbjct: 36 ELEEITVAELQEGLRSGKWTSVSLTQSYLERVHALDSSGPKLNSVIEINPDAEQIAAHAD 95 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHIL--DGFRPHYESTVTQKLWDNGA 116 R L GIP+ IKD AT + T A S + G + ++ V +L GA Sbjct: 96 ADRKGGKVHSALHGIPVLIKDNIATADKMQTTAGSLAMVGAGAPGNKDAFVAAQLRRAGA 155 Query: 117 VMLGKLNMDEFA-MGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 V+LGK N+ E+A + SS+ TS + G P+ ++D P GSS GS AAV+ L Sbjct: 156 VLLGKTNLSEWANLRSSHSTSGWSGRGGQTHCPY-ALDRN----PSGSSSGSGAAVSASL 210 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 CA +IGT+T GS+ P+ G VGIKPT G SR II + + D AG + R V D+A L Sbjct: 211 CAVAIGTETDGSVVSPSCSNGLVGIKPTVGLVSRSRIIPISHTQDTAGPMARCVGDAAAL 270 Query: 232 LKAIAGY---DECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 L +AG DE PDY + LD ++GM +G+ ++ ++P +DK ++ Sbjct: 271 LTLMAGADPEDEATKASEGHIAPDYTKFLDANGLRGMRLGVVAKFT--NIAPPVDKLFRD 328 Query: 288 GISWLKDAGAKIVE 301 ++ LK AGA++VE Sbjct: 329 AVTALKTAGAEVVE 342 >gi|148261754|ref|YP_001235881.1| amidase [Acidiphilium cryptum JF-5] gi|146403435|gb|ABQ31962.1| Amidase [Acidiphilium cryptum JF-5] Length = 453 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 17/235 (7%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD F G T+A S +L G P + + +L G V +G+ NM EFA Sbjct: 77 GIPIAVKDLFDMAGQETRAGSKVLAGCGPAAQDAPAIARLRRMGFVPIGRTNMTEFAYSG 136 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +YG + WR ++ PGGSS GS+ AVA + A IGTDTGGS R PA F Sbjct: 137 IGTNPHYGTPPARWRR---EERRIPGGSSSGSAVAVAAGMAHAGIGTDTGGSCRIPAVFN 193 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG KPT R R G++ + SLD G + R+V A+L +AG E P P Sbjct: 194 DLVGFKPTARRIPREGVVPLSSSLDSVGPLARSVGCCALLDSIMAGTPEAP------PAP 247 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + G+ + +P++ LD L + + + L AGA+I I++P Sbjct: 248 -------AELAGLRLAVPRDVALDTLDDEVAAGFDAALRRLSAAGARIETIAMPE 295 >gi|149913971|ref|ZP_01902503.1| amidase [Roseobacter sp. AzwK-3b] gi|149812255|gb|EDM72086.1| amidase [Roseobacter sp. AzwK-3b] Length = 522 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 143/516 (27%), Positives = 218/516 (42%), Gaps = 40/516 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + V ++ LRS +A L + + +E +N + NA I A A + D+R Sbjct: 20 ELANLTVKGIQEGLRSGAFTAEALTLASLAQVEATNPKYNAIIFHNNDAALETARDVDRR 79 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNG 115 I G+ L G+P+ +KD G T A +L P +S V +L Sbjct: 80 IAEGEELGPLAGVPVVVKDPMDMVGFPTTAGWRLLYSGAGGVDLMPATDSPVVARLRAAD 139 Query: 116 AVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 AV++GK N+ + GS S+ GP ++ + + PGGSS G++AAVA +C Sbjct: 140 AVIIGKTNVPVLSHTGSHANDSWAGPTLN-----VAIEDRVPGGSSAGTAAAVAAKMCVL 194 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + +TGGSI+ PAS G VGIKPT G G++ + + D G I RTV D+AI L + Sbjct: 195 GLAEETGGSIQNPASAQGLVGIKPTIGLVPNAGVVPLSANRDVVGPIARTVTDAAICLDS 254 Query: 235 IAGYDECD----ATCVNLPVPDYERALDQ-SIQGMTVGI-PKEYRLDYLSPTIDKTWQQG 288 +AGY D A+ +P Y AL + +++G +G+ +R L P ++Q Sbjct: 255 LAGYSSEDPKTLASVGKIPAKGYTAALSKDALKGKRIGLYGSGWRNQPLCPETTALYEQA 314 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL-------ARYDGVRYGLRVEGK 341 L AGA +VE + +A + P + N YD Y LR G Sbjct: 315 QEELTAAGAILVEDPFAGSGFA----DLRQPTAPTPNFDGRGLESIAYDLQSY-LRRLGP 369 Query: 342 D-----ILEMYENTRSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 D E E T FG E + + D A +K + + Sbjct: 370 DAALKTFAEFAEATSEENPFGPEGVLYFLNSLPDFQAAMLDPTAPPAMPEFIALKAAYLD 429 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 E V + + FP ++E G + +N+AGLP ++VPA Sbjct: 430 ILET---VFRAHSLDSLVFPQMRQELPGLHSGETIQETTVGELNIAGLPGVTVPAGFYAS 486 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P L +G+ + E L + E+ G R K Sbjct: 487 SAPFELIFLGRLWDEAELLAQAFAYEQATGAGRSMK 522 >gi|188580388|ref|YP_001923833.1| amidase [Methylobacterium populi BJ001] gi|179343886|gb|ACB79298.1| amidohydrolase, AtzE family [Methylobacterium populi BJ001] Length = 471 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 210/470 (44%), Gaps = 51/470 (10%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHT 89 ++ I + +N+ + + ++A A A D GDA L G+P +K+ F G+ T Sbjct: 34 LERIARLDPAVNSVTDRLVERATARAASLDAARARGDALGPLAGVPFAVKNLFDVAGLPT 93 Query: 90 QACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 +A S I + ++ + ++L GAV++G L M E+A + E + G +P Sbjct: 94 RAGSRINRERAAATRDAALIERLEAAGAVLVGTLGMGEYAYDFTGENIHDGNTRNP---- 149 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 GGSSGGS AAVA L ++ +DT GSIR PA+F G G+KPTYGR SR G Sbjct: 150 -HARGHMSGGSSGGSGAAVAAGLVPIALASDTNGSIRVPAAFCGCFGLKPTYGRLSRAGS 208 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 F SLD G + R+ RD A+ A+ G D D P LD+ + + + + Sbjct: 209 FPFVGSLDHLGPMARSSRDLALAYDAMQGPDPEDPALAPHPAEPAAPDLDRGVADLRIAV 268 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE-ASSNLA 327 E Y + D ++ + A +++P A A Y+I+ AE A+ +L Sbjct: 269 AGE----YFARGGDPEAFAAVAHVARALGAHRSVAIPEAARARAAAYLITAAEGAALHLD 324 Query: 328 RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 R +R+ F V+ R++ G + + + R Sbjct: 325 RL-------------------RSRAGDFDPAVRDRLIAGAMLPAPFVEQAQRFR------ 359 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSA-------FPL-GKEENNSGSMGHIYNDVFTVAVN 439 RD A + VDVIL P+TP A F L G E ++G VFT ++ Sbjct: 360 RWYRDAVLALFREVDVILVPSTPVRAPRAGQTTFVLDGVELPVRPNIG-----VFTQPIS 414 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 GLP +VP L + +PLG+Q+I P+ E V + +E+E P Sbjct: 415 FIGLPVAAVPVWL-DGGLPLGVQVIAAPWNEALCLRVARHLEREGAVRAP 463 >gi|39934847|ref|NP_947123.1| amidase [Rhodopseudomonas palustris CGA009] gi|39648697|emb|CAE27219.1| putative Glu-tRNA amidotransferase [Rhodopseudomonas palustris CGA009] Length = 452 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 135/470 (28%), Positives = 207/470 (44%), Gaps = 55/470 (11%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIK 79 +A +LV+ + I + + A+I V A AA+ DK R GIPI IK Sbjct: 23 TARKLVEDCLARIADPAGEGARAFIHVDRDAALQAADAMDKLRAAKAAPSPFAGIPISIK 82 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F KG T+A S LD P ++ +L G V++G+ NM EFA +Y Sbjct: 83 DLFDIKGQVTRAGSRALDDNPPADSDAPAVARLRRAGFVVIGRSNMTEFAYSGIGINPHY 142 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P + + PGGSS G++ +VA + A +GTDTGGS R PA+F G VG KP Sbjct: 143 G---TPKAAYRRNVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIPAAFNGIVGYKP 199 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-PDYERAL 257 + R R G + + SLD G + R+V A L DA + PV P R L Sbjct: 200 SQYRVPRDGAVPLSFSLDSIGPLARSVECCATL----------DAILADQPVGPLIARPL 249 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 +GM + +P LD L + +++ + L G I +I +P + + Sbjct: 250 ----KGMRIAVPTTVALDDLDAAVTAAFERALKTLASHGVIIEKIEVPE-------FAEV 298 Query: 318 SPAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P A A Y RY + +G ++Y+ V+ RI+ G ++ Sbjct: 299 GPLGAKGGFAAAESYAWHRYLIVAQG----DVYD--------PRVRERILRGETQSAADY 346 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGHIYNDV 433 D + ARK +LI R A D + PTT +A + + ++ + + ++ Sbjct: 347 VD--LVNARK--SLIAR--ASARLAPYDAVAMPTTAIAAPTIAELADDKAFTKANLLTLR 400 Query: 434 FTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 +NM AIS+P C + + P+GL L G + +F V +E Sbjct: 401 NCTLINMIDGCAISLP---CHQDGEPPIGLMLAGVNGTDREIFEVAAGME 447 >gi|46116788|ref|XP_384412.1| hypothetical protein FG04236.1 [Gibberella zeae PH-1] Length = 468 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 137/501 (27%), Positives = 216/501 (43%), Gaps = 72/501 (14%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI----EVVAQKARAAAEESDKR 62 + SE+ ++++ ++S E S + I+ + + A+ E + Q+A++ E K Sbjct: 14 LTASEALAQIQADELSVEEYAKSLFKKIDERDKDVQAWAYLDKEAIMQQAKSLDEVPKK- 72 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + L G+PI +KD TK + TQ S + DG P ++ + L GA++ G Sbjct: 73 ----NRGPLHGLPIAVKDVIYTKDMPTQFNSPLYDGHFPETDAASVRILRHAGALIFG-- 126 Query: 123 NMDEFAM--------GSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCA 173 D F + G + + + I P ++ + D TPGGSS GS AAVA F Sbjct: 127 -TDPFVISLSHTDRPGKTTTSQFAAIHIGP-KTRNPHDPIRTPGGSSSGSGAAVADFQVP 184 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GT TGGS+ +PASF G G KPT+ SR G +A D G R V D +L Sbjct: 185 IALGTQTGGSLIRPASFNGIYGFKPTWNAVSREGQKIYALMYDTLGWYGRCVEDIILLAD 244 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 A D+ D E + Q I+G I K P+ K + L+ Sbjct: 245 VFALEDDED-----------EESCFQGIEGARFAICKTIVWPMAGPSTQKAISRAADLLR 293 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEA--SSNLARYDGVRYGLRVEGKDILEMYENTR 351 GA + E+ LP LP +Y I ++ L Y R G G+ ++E EN Sbjct: 294 SHGAIVEELDLPSEFDNLPEWYRIGLHTEGRATFLPEY---RVGKNHMGQVLIEHVENVD 350 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++K +DS R R + I + ++TP+ P Sbjct: 351 NFSRKTQLK-------------AFDS-MARLRPVFDEIASRYA--------AVITPSVPD 388 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL--PAISVPAALCEKKMPLGLQLIGQPFR 469 A P+G E S HI+ ++++ GL P ++VP + MP+GL L+ +R Sbjct: 389 EA-PVGIESTGS----HIFCSMWSLTATQ-GLHSPVLNVPGFKGDHDMPVGLSLVAPRYR 442 Query: 470 EETLFSVGQ----IIEKEAGY 486 + L VG+ I E E G+ Sbjct: 443 DRHLLKVGKAVGAIFEAEGGW 463 >gi|163851120|ref|YP_001639163.1| amidase [Methylobacterium extorquens PA1] gi|163662725|gb|ABY30092.1| amidohydrolase, AtzE family [Methylobacterium extorquens PA1] Length = 471 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 144/480 (30%), Positives = 219/480 (45%), Gaps = 51/480 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 + A ++V + + I + +N++ E +A++A A A E D GD L G+P +K Sbjct: 24 VGARDVVAATLDRIARIDPAVNSFTERLAERATARAAELDAARARGDRLGPLAGVPFAVK 83 Query: 80 DCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 + F G+ T+A S I P ++ + ++L GAV++G L M E+A + E + Sbjct: 84 NLFDVAGLPTRAGSRINRERAPATRDAALIRRLEAAGAVLVGTLGMGEYAYDFTGENIHD 143 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P GGSSGGS AA+A L ++ +DT GSIR PA+F G G+KP Sbjct: 144 GNTRNP-----HALGHMSGGSSGGSGAAIAAGLVPLALASDTNGSIRVPAAFCGCFGLKP 198 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 TYGR SR G F SLD G + R+ RD A+ A+ G D D + P LD Sbjct: 199 TYGRLSRAGSFPFVGSLDHLGPMARSSRDLALAYDAMQGPDPEDHAMASRPAEPAAPDLD 258 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + + + + + Y + D ++ + A + +P A A Y+I+ Sbjct: 259 RGVADLRIAVAG----GYFAQGGDPEAFAAVAHVAGALGARRSVVIPEAARARAAAYLIT 314 Query: 319 PAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AE A+ +L R LR G D F V+ R++ G + + Sbjct: 315 AAEGAALHLDR-------LRSRGGD------------FDPAVRDRLIAGAMLPA-----P 350 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-------FPL-GKEENNSGSMGHI 429 RA++ R RD A + VDVIL P+TP A F L G E ++G Sbjct: 351 FVERAQRFRRWY-RDAMLALFREVDVILAPSTPVRAPRSGQTTFVLDGVELPVRPNIG-- 407 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VFT ++ GLP +VP L + +PLG+Q+I P+ E V +E+E P Sbjct: 408 ---VFTQPISFIGLPVAAVPVWL-DGDLPLGVQVIAAPWNEALCLRVAHHLEREGAVRAP 463 >gi|257078424|ref|ZP_05572785.1| amidase [Enterococcus faecalis JH1] gi|294780064|ref|ZP_06745441.1| amidase [Enterococcus faecalis PC1.1] gi|256986454|gb|EEU73756.1| amidase [Enterococcus faecalis JH1] gi|294452870|gb|EFG21295.1| amidase [Enterococcus faecalis PC1.1] gi|329576742|gb|EGG58244.1| Amidase [Enterococcus faecalis TX1467] Length = 482 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 136/517 (26%), Positives = 224/517 (43%), Gaps = 82/517 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S +K G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKKAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYE-RALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P+ +++ Q ++ + P R+ SP + +Q +L AG +I+E Sbjct: 229 APYQAPLAEWQTHTKKQRLKIALCTASPIGSRI---SPEATQAAKQAADFLAAAGHEIIE 285 Query: 302 ISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEV 359 I P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 286 IPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ-- 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +I TYV S + +D + E Q D+ L+PTT SA P E Sbjct: 340 --KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSA-PKINE 384 Query: 420 ENNSGSMGH----------------IYN--------DVFTVAVNMAGLPAISVPAALCEK 455 + S + IY+ +T N+ G PAIS+P + Sbjct: 385 DLQSEHIRQRMEQAAELTAAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTAT 444 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 445 GLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|88810880|ref|ZP_01126137.1| hypothetical protein NB231_17408 [Nitrococcus mobilis Nb-231] gi|88792510|gb|EAR23620.1| hypothetical protein NB231_17408 [Nitrococcus mobilis Nb-231] Length = 473 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 143/482 (29%), Positives = 202/482 (41%), Gaps = 40/482 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA-AAEESD 60 +E+ + E + ++S VE+ ++ ++ IE N +NAY + Q R A + Sbjct: 6 AEIACLTAVEMLEHFECGELSPVEVTEAALEQIELHNKTVNAYCFLDEQTTRVEARRAQE 65 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G L+G+P+ IKD F +G T+ S ++D +S L +G + LG Sbjct: 66 RRRRKGALGLLDGVPVAIKDVFMFRGWPTRKGSKLIDESPAPVDSPAVASLRRHGFIPLG 125 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF ++ G +PW SSGGS+AAV + A ++GTD Sbjct: 126 KTTTPEFGWKGVTDSPLCGVTRNPWDPAKGAGG-----SSGGSAAAVPLGMGALALGTDA 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PASF G VG KPT GR F L G I +V+D+A L+ I E Sbjct: 181 GGSIRIPASFCGAVGFKPTQGRVPFWPTSPFG-QLAHPGPIAWSVQDAAHLMNVIC---E 236 Query: 241 CDATCVNLPVP--DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 DA LP P D+ AL I+G V + + + + +D GA Sbjct: 237 PDARDTTLPPPEVDFVAALADGIKGWQVAFSPALGYVDVDQEVAEVVAAAVKRFEDLGAH 296 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I EI P + +P EA L Y G LR E R++ Sbjct: 297 IEEID--------PGF--PNPREAFDRLF-YSGAANALRTISA------EQRRAMD---- 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIR-TLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 I + + D YL A R LI+R F ++LTPT P +AF G Sbjct: 336 -PALIRVAEWAEQLSMLD--YLAALNERAALIER--MNRFHDRYALLLTPTLPIAAFEAG 390 Query: 418 KEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E + FT NM G PAISVP +P+GLQ+IG R+E + Sbjct: 391 LEVPPDWQDERWPSWTPFTYPFNMTGQPAISVPCGFTRAGLPVGLQIIGPRHRDEWVLQA 450 Query: 477 GQ 478 Sbjct: 451 AH 452 >gi|53723325|ref|YP_112310.1| amidase [Burkholderia pseudomallei K96243] gi|52213739|emb|CAH39793.1| putative amidase [Burkholderia pseudomallei K96243] Length = 528 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 151/488 (30%), Positives = 230/488 (47%), Gaps = 64/488 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFAT-KGIH 88 I I+ ++NA IE+ A A A D G AR L G+ + +KD AT + Sbjct: 61 IARIDRDGPRLNAIIEL-NPDAEAIAHALDAERAAGVARGPLHGVTVALKDNIATGDRMS 119 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 120 TTAGSLALDGVRATRDAHLVARLRRAGAVIVAKANLSEWANFRSTRSTSGWSARGGLSRN 179 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A S+GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 180 PYALDR-TTSGSSSGSAAAVAAGLVAVSVGTETDGSIVSPAAINGCVGLKPTLGRVSRDG 238 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTVRD+A LL A+AG D D AT DY ALD +++G Sbjct: 239 IVPVSHTQDTAGPIARTVRDAARLLGALAGGDARDSATASAPAPADYVAALDANALRGAR 298 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 299 LGIARAYFTGH--DEVDVQIERAIAEMKRLGAVVIDPVDLPKADYEEDEKVVLLHEFKHG 356 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP++ +P LA D + + R +++ FGQE Sbjct: 357 LPSWLRTFAPHARVRTLA--DVIAFNARQHAREMPY---------FGQE----------- 394 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEE 420 L ++ L A R + R A ++G +D ++ PT T A+ + Sbjct: 395 LLLHAQEAGGLDAAAYRDALARCGRRARDEGLARVLREHRLDALVAPTEGT-AWLIDLIN 453 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +SG D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G Sbjct: 454 GDSG------GDGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAF 506 Query: 481 EKEAGYFR 488 E+ + R Sbjct: 507 EQATQWRR 514 >gi|302559426|ref|ZP_07311768.1| amidase [Streptomyces griseoflavus Tu4000] gi|302477044|gb|EFL40137.1| amidase [Streptomyces griseoflavus Tu4000] Length = 489 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 149/505 (29%), Positives = 222/505 (43%), Gaps = 47/505 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E NF + E LR+ D+++VEL D I IE + +NA +ARAAA +D+ Sbjct: 2 EWNFASAEEIAVALRAGDVTSVELTDEAISRIERDDKAINAICVPDFDRARAAAHHADRA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ R L G+P+ +K+ + G+ T F P ++ +L GAV+LGK Sbjct: 62 RGRGEDRPLLGVPVTVKESYDIAGLPTTWGIPTHRDFVPTEDAVQVSRLRAAGAVVLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ + YG +PW + TPGGSSGGS+AA+A A SIG+D GG Sbjct: 122 NVPLGLRDLQSFNEIYGTTNNPW-----DHERTPGGSSGGSAAALAAGFGALSIGSDIGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPSLDQA--GIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G++ + LD A G + RT RD +LL + Sbjct: 177 SLRTPAHFCGVYAHKPTLGLVANRGMVPPATPALPVDLDLAVVGPMARTARDLTLLLDVM 236 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D A + LP ++R D V + E+ + + L Sbjct: 237 AGPDPLTLGVAHALTLPPARHQRLSD-----FRVLVLDEHPFIPTGSAVRAGVDRVAGAL 291 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENT 350 D GA++ HT LP AEA++ + + G G E YE Sbjct: 292 VDGGARVER----HTPL-LPDL-----AEAATLYMQLLFSGAVAGFPAEA------YEQL 335 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R+ G R + + ++RA R L + + F D ++ P TP Sbjct: 336 RTRAAGLSADDRSLGAARLRGMVLSHRDWIRANDRRELHRHGWRGLFAD-FDAVVCPITP 394 Query: 411 TSAFP------LGKEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 T AFP L + + Y D V+ M GLPA +VPA + +P+G+Q Sbjct: 395 TPAFPHDHTPDLLDRRIAIDGVEYPYLDQLVWAGLATMPGLPATAVPAGRTPEGLPVGVQ 454 Query: 463 LIGQPFREETLFSVGQIIEKEAGYF 487 LIG F + T + +++E++ G F Sbjct: 455 LIGPMFEDRTPLRLAELLEQKIGGF 479 >gi|108761318|ref|YP_632999.1| amidase family protein [Myxococcus xanthus DK 1622] gi|108465198|gb|ABF90383.1| amidase family protein [Myxococcus xanthus DK 1622] Length = 557 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 137/480 (28%), Positives = 220/480 (45%), Gaps = 49/480 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 ++ V + I +++ ++ +I AAE S +R+ G L+GIP+ +K Sbjct: 108 VAVVNRIHESIARMDSGKQRLGLFIARKPDDVHRAAEASSERLREGRPLSVLDGIPVVLK 167 Query: 80 DCFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 D G T + FR +STV +L GA++LGK NM+E + Sbjct: 168 DEVDLAGFPTTLGTR----FRTQVAAADSTVAARLKAAGAIILGKANMNEIGINPIGLNP 223 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 ++G +PW T + T GGSS S+AAVA LC SIG D GGSIR PA+ G VG+ Sbjct: 224 HHGAARNPW----DTGRIT-GGSSSASAAAVAAGLCPLSIGADGGGSIRIPAALCGIVGL 278 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T+GR G+ ++ G + TV D A +AG D D Sbjct: 279 KATWGRIPETGVPPLCWNVGHVGPMGLTVDDVAAAYAVLAGPDGHDLVSQGQSPHHLSGY 338 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 D+ + G+ +GI +Y D + + + ++ ++ L AGA++VEI P L + Sbjct: 339 EDEGLSGVRLGICWDYFEDADADVVARC-KEAVAALSAAGARVVEIPPPDLNTVLWTHSC 397 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 I +E S +++ + FG + + + IG + ++ Sbjct: 398 IILSEMS------------------EVMLPHVKAHPSEFGLDTRTNLAIGRHFRATDLVH 439 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PTSAFPLGKEENNSGSMGHI 429 + R R R L+ A GVDV++TPTT P +A P G E+N + + Sbjct: 440 ALRHRHRLTRELL------AQMAGVDVLVTPTTATTAPLIPEAALPDG--ESNLPVVDAL 491 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 F N+ G P++SVPA E+ +P+G+QL G+P+ E L +G+++E+ + Y P Sbjct: 492 MR--FVRLANLTGFPSLSVPAGFDEEGLPVGVQLTGRPYEEHLLLRLGRVVEQASEYRVP 549 >gi|116694449|ref|YP_728660.1| glutamyl/aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Ralstonia eutropha H16] gi|113528948|emb|CAJ95295.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Ralstonia eutropha H16] Length = 447 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 129/483 (26%), Positives = 212/483 (43%), Gaps = 58/483 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGD 67 ++ ++ +L + +A+ L+ S ++ I N + + V+ AR A+ SD G Sbjct: 5 IATAQRQLAAGSANALSLLASCVERICNPGGEGARVFPHGVSMAARKQAQASDMLREQGV 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+P+ +KD F +G T+A + +L ++ V +L GAV +G+ NM EF Sbjct: 65 AGPLAGVPVSVKDLFDVQGDVTRAGARVLPERAASADAPVIARLRAAGAVFVGRTNMTEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A +YG +P D PGGSS G++ +V + A+IG+DTGGS R P Sbjct: 125 AYSGVGINPHYG---TPRNPYDRQAGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSCRIP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G KPT R G + +PS D G + TV A + +AG Sbjct: 182 AALCGIAGFKPTARRVPLQGTVPLSPSYDSVGCLANTVACCAAVDAVMAGE--------- 232 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH- 306 VP A + G+ + +P L+ +S + + + + + L AGA + ++S Sbjct: 233 --VPPAGPA---PLAGLRLAVPTGLVLEGMSDEVAEVFSRTLRRLSAAGALLQDVSFDSW 287 Query: 307 TQYA-LPAYYIISPAEASS---NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 Q A + A + AEAS+ +L RY RV + + + + R+ Sbjct: 288 DQLAGIGANGGLVAAEASAWHGSLLAEQADRYDPRVLSR--IRLADGQRA---------- 335 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + YLR + R + R +A G D ++ PT P A + +++ Sbjct: 336 --------------ADYLRMLQRRGELCRQ-ADAELAGFDAVVLPTVPVVAPRIADLDDD 380 Query: 423 SG--SMGHIYNDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQ 478 S + +A NM L A+SVP C + P+GL L G+ + L ++G Sbjct: 381 EAFFSTNRLLLRNPAIA-NMLDLCALSVP---CHRPGDAPVGLMLFGRHLSDRRLLAIGM 436 Query: 479 IIE 481 IE Sbjct: 437 GIE 439 >gi|26987350|ref|NP_742775.1| putative amidase [Pseudomonas putida KT2440] gi|24982002|gb|AAN66239.1|AE016252_7 amidase family protein [Pseudomonas putida KT2440] Length = 469 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 138/470 (29%), Positives = 209/470 (44%), Gaps = 39/470 (8%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIG 77 + +S VE+VD + I+ N +NA+ V + ARAAA S++R G L+G+P Sbjct: 22 RQLSPVEVVDDVLARIDLHNPAVNAFCHVDGEGARAAARASEQRWQRGQPCGRLDGVPAS 81 Query: 78 IKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD T+G+ T+ S G P ++ + + + GAV++GK EF + Sbjct: 82 IKDLTLTRGMPTRKGSRTTSGAGPWEIDAPFSAFMREAGAVLVGKTTTPEFGWKGVTDNP 141 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YG +PW + + T GGSSGG++AA A L G+D GGSIR P +FTGT GI Sbjct: 142 LYGITRNPWDT-----RLTAGGSSGGAAAAAALNLGVLHQGSDAGGSIRIPCAFTGTFGI 196 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPT+G + + L G +TRTV DS ++L +A D D P + Sbjct: 197 KPTFGYVPQWPASAMT-VLSHLGPMTRTVDDSVLMLDCVARPDARDG-LAGAPRQAPWLS 254 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 Q + G+ + + + P I Q + L GA++ E+ P + Sbjct: 255 QQQDLSGLRIAYSANFGYVQVDPQIQALVAQAVQRLARLGAQVEEVD--------PGFS- 305 Query: 317 ISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P E + L R L E K +L+ R I E +I +G Y Sbjct: 306 -DPLETFNTLWFAGAARLASALSDEQKALLD--PGLRWIA---EQGAQISLGEY------ 353 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDV 433 + L AR LI + AF Q DV+++P P AF G SG + Sbjct: 354 --TQALEARA--ELIAK--MNAFHQRYDVLVSPMLPLVAFEAGHNVPPGSGMAQWMEWTP 407 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + N+ PA SVP + +P+GLQ++ F +E + V ++ E+ Sbjct: 408 LSYPFNLTQQPAASVPCGFTREGLPVGLQVVAGRFADEQVLRVCKVYEQH 457 >gi|218185324|gb|EEC67751.1| hypothetical protein OsI_35272 [Oryza sativa Indica Group] Length = 610 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 126/491 (25%), Positives = 223/491 (45%), Gaps = 50/491 (10%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +I+ V + ++ A++ + M +I Q AE S R G ++G Sbjct: 147 SGEITPVMVARRFLAAVKECSGPDLNMALFISCNPQDVIRQAEASTLRYQQGAPLSAMDG 206 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + + +KD T + L RP + + V +L GAV+ GK NM E G+S Sbjct: 207 VLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGTS 266 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G +P+ +T K G S G ++ AG LC ++G D GGS+R PA+ G Sbjct: 267 GINPHHGSTRNPY----NTGKVAGGSSGGSAAVVCAG-LCPVALGADGGGSVRMPAALCG 321 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPT GR S+ G++ ++ GI+ TV D+ I AIA D+ + + P+ Sbjct: 322 VVGLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAAIA--DQSQPSHLQ---PE 376 Query: 253 YERALDQSIQGM-TVGIPKEYR-LDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQY 309 L ++ M T+ + + + + S I + + L+ G + ++++P + Sbjct: 377 LNLPLLKAASSMPTIRLARYAKWFNDCSEDIRSCCYKAVHTLRTRYGWETADVTIPEIEE 436 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY- 368 A+Y+ +E +++ +Y + G +V RI + Y Sbjct: 437 MRLAHYVTMGSECTASFDKY-----------------LKKLSKSEIGWDV--RIALSAYG 477 Query: 369 VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 SR Y +S +R R++ F + + DVI+TP T +A L ++G + Sbjct: 478 SFGSRAYLNSQRIRNRQMY------FHDKIFETFDVIVTPMTGVTAHELQDNAGHTGELD 531 Query: 428 HIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +I +++A N GLPAI+V + +P+GLQ IG+P+ E TL + +++ Sbjct: 532 YINGAALVRYSIAGNFLGLPAITVKVGYDREGLPVGLQFIGRPWSEATLLHLAYAMQEAC 591 Query: 485 G--YFRPHKWW 493 G Y +P ++ Sbjct: 592 GKNYRKPMVYY 602 >gi|77457520|ref|YP_347025.1| amidase [Pseudomonas fluorescens Pf0-1] gi|77381523|gb|ABA73036.1| putative amidase [Pseudomonas fluorescens Pf0-1] Length = 485 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 123/465 (26%), Positives = 201/465 (43%), Gaps = 48/465 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA-AAEESDKRIINGDARD-LEG 73 + ++ +S E++ +Y+ I+ N +NA + + Q A+E D+++ ++R + G Sbjct: 21 IHARKVSCREVMQAYLTHIDRFNPAVNALVSLRPQDVLLREADECDRQLDRSESRGWMHG 80 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT G+ T S + P +++ ++ D GA+++GK N+ EF +GS Sbjct: 81 MPQAIKDLAATAGLRTTLGSPLFAEQVPQHDAISVARVRDCGAIIIGKSNVPEFGLGSQT 140 Query: 134 ETSYYGPVISPWRSMDSTDKFTP----GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S +G +T+ + P GGSSGG++ A+A L + G+D GS+R PA+ Sbjct: 141 YNSVFG---------TTTNAYDPSLIAGGSSGGAAVALALRLLPVADGSDMMGSLRNPAA 191 Query: 190 FTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 F G +P+ GR + F L G + RTV D A LL AGYD V L Sbjct: 192 FNNVFGFRPSQGRVPHGPMPEVFVQQLATEGPMGRTVTDVARLLSTQAGYD----PRVPL 247 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + D R Q +Q G+ + DY P D S L D A + Sbjct: 248 SLADEPRDFGQDLQQDCCGLRLGWLGDYNGYLPMEDGVLSLCESALADFSALGCHVEACQ 307 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +++ + + G Y Y R++ E + I G Sbjct: 308 PDFSMERLWQTWLTHRHFLVQGSLGAAYA-----------YPQKRAL-LKPEAQWEIEGG 355 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + ++ Y + R+ R L +E FE+ D +L PT FP ++ + Sbjct: 356 LRLTAAEVYQASVARSEWYRAL-----SELFER-YDFLLLPT--AQVFPFDAQQAWPRVV 407 Query: 427 GHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 G D + + +AGLP+ISVP +P+GLQ+IG Sbjct: 408 GGQTMDTYHRWMEVVIGPTLAGLPSISVPVGFNPAGLPMGLQIIG 452 >gi|212531007|ref|XP_002145660.1| amidase family protein, putative [Penicillium marneffei ATCC 18224] gi|210071024|gb|EEA25113.1| amidase family protein, putative [Penicillium marneffei ATCC 18224] Length = 494 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 137/496 (27%), Positives = 219/496 (44%), Gaps = 39/496 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRI 63 + +S+ + R + L+ +++ IE + +N+ + + + AA D Sbjct: 6 LTISQVHEAYRDGTWTCRNLIQAFLNRIEMLDKNGPCINSTLAISDVAVQEAAALDDYFK 65 Query: 64 INGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L GIP+ +KD TKG+ T SH+ P ++ V +KL GA++LGK Sbjct: 66 TKGQFIGRLHGIPVLVKDQADTKGMVTTYGSHVAKNNIPTKDAFVVEKLKSEGAIILGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKF--TPGGSSGGSSAAVAGFLCAASIGTDT 180 M ++A T + ++ W+ + K GGSS GS+AAVA ++ DT Sbjct: 126 TMGDWAT-----TWFSTSSVTNWKFTHNPYKLGHDVGGSSSGSAAAVAANFSILAVAEDT 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PASFT VG++ T G SR G + D G I RTV D A++L + G+D Sbjct: 181 GGSIRCPASFTNLVGLRCTPGLISRTGFCPLVKTQDTPGPIARTVSDCALMLDCMVGFDP 240 Query: 241 CD---ATCVNLPVPD---YERALD-QSIQGMTVGIPKEY---RLDYLSPTIDKTWQQGIS 290 D A V P P+ Y LD +I +GI + D ++K IS Sbjct: 241 NDEWTAVAVTAPRPNGGSYAAELDPNAICKSKIGIIRSLFGSDSDPACNAVNKLVNHAIS 300 Query: 291 WLKDAGAKIVEISLPHTQYAL---PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 L+ G V++ LP + + PAY + + S++ + + L + DI+ Sbjct: 301 TLQKTGTIFVDVELPRLRDYMTTTPAYVV----RSRSDINAFLSTKPHLPQDVADIVPEN 356 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILT 406 S+ F +V H S D YL+ R +R T G+D + Sbjct: 357 PPHPSLDFTSQVAHGP-------SDPTTDPTYLQRLLDRDEFQRRLTCLMATHGLDALAF 409 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 P P E++ +G + T+ + A +PAISVP E +P+G++L+ Sbjct: 410 PDVQIP--PPRHEDSTNGRFPTCWEFPTNTLLASQARVPAISVPVGFTEDGLPVGMELVS 467 Query: 466 QPFREETLFSVGQIIE 481 +RE+ L + + IE Sbjct: 468 WEYREQALLEMARGIE 483 >gi|302691818|ref|XP_003035588.1| hypothetical protein SCHCODRAFT_50042 [Schizophyllum commune H4-8] gi|300109284|gb|EFJ00686.1| hypothetical protein SCHCODRAFT_50042 [Schizophyllum commune H4-8] Length = 545 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 118/450 (26%), Positives = 212/450 (47%), Gaps = 41/450 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 LEG I +KD G+ Q + ++ F P ++T+ ++ + G ++GK + + G Sbjct: 99 LEGKTICLKDNICLAGVPCQFGTDVVSEFVPSTDATIVTRILEAGGNIIGKATCENMSHG 158 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +++++S PV +P+ F+ GGSS G A + +G D GGS+R PA+F Sbjct: 159 AASDSSPGRPVENPY-----AKGFSAGGSSSGCGALIGSGEVDMGMGGDQGGSVRLPAAF 213 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP- 249 G VG+KPT G G++S S+D G +TRTV D+A+LL+ +AGYD D + P Sbjct: 214 CGLVGLKPTVGLVPYTGVLSSEASVDYVGPMTRTVLDNALLLEIVAGYDGIDDRQLGAPA 273 Query: 250 ---VPDY------ERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKI 299 VP Y R + + G+ +GI ++ L L P + + ++ + + GA++ Sbjct: 274 RAFVPHYANDVLSSRRPEYPLMGIRIGILQQGIELPRLQPQVGRLFELAVQRFRHLGAQV 333 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358 +S+P + LP +++ +S R L + E + L ++ + Sbjct: 334 TPVSVPRHREILPVMTVLNKMGSSQTRIGRQCQRRALYLNEYFEKLLPWDQAKWDRAHTY 393 Query: 359 VKHRIMIGTYVL--SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 VK+ + Y + Y + Y RA +K ++ +A Q DV++ PT P +A Sbjct: 394 VKNTSLCAEYAWGGAGLKYATAYGRAVNQVRRLKEEY-DAVLQECDVLIMPTVPFTA--- 449 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMA-----GLPAISVPAALC-------------EKKMP 458 + + G H ++ + N + G PA+S+P + + ++P Sbjct: 450 KRHSSPDGGPWHTHDHYAGIIANTSQFNGTGHPALSIPMGVAPPTDDFILSPSDKDIRLP 509 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +GLQ++G + E T++ V E+ AG +R Sbjct: 510 VGLQIVGNLWDEGTVYRVADAFERSAGDWR 539 >gi|126443422|ref|YP_001064227.1| amidase [Burkholderia pseudomallei 668] gi|126458189|ref|YP_001077150.1| amidase [Burkholderia pseudomallei 1106a] gi|134281839|ref|ZP_01768546.1| Tat (twin-arginine translocation) pathway signal sequence/amidase domain protein [Burkholderia pseudomallei 305] gi|167908305|ref|ZP_02495510.1| amidase [Burkholderia pseudomallei NCTC 13177] gi|237510612|ref|ZP_04523327.1| peptide amidase (Pam) [Burkholderia pseudomallei MSHR346] gi|242311083|ref|ZP_04810100.1| peptide amidase (Pam) [Burkholderia pseudomallei 1106b] gi|126222913|gb|ABN86418.1| amidase [Burkholderia pseudomallei 668] gi|126231957|gb|ABN95370.1| peptide amidase (Pam) [Burkholderia pseudomallei 1106a] gi|134246901|gb|EBA46988.1| Tat (twin-arginine translocation) pathway signal sequence/amidase domain protein [Burkholderia pseudomallei 305] gi|235002817|gb|EEP52241.1| peptide amidase (Pam) [Burkholderia pseudomallei MSHR346] gi|242134322|gb|EES20725.1| peptide amidase (Pam) [Burkholderia pseudomallei 1106b] Length = 528 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 151/488 (30%), Positives = 230/488 (47%), Gaps = 64/488 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFAT-KGIH 88 I I+ ++NA IE+ A A A D G AR L G+ + +KD AT + Sbjct: 61 IARIDRDGPRLNAIIEL-NPDAEAIAHALDAERAAGVARGPLHGVTVALKDNIATGDRMS 119 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 120 TTAGSLALDGVRATRDAHLVARLRRAGAVIVAKANLSEWANFRSTRSTSGWSARGGLSRN 179 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A S+GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 180 PYALDR-TTSGSSSGSAAAVAAGLVAVSVGTETDGSIVSPAAINGCVGLKPTLGRVSRDG 238 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTVRD+A LL A+AG D D AT DY ALD +++G Sbjct: 239 IVPVSHTQDTAGPIARTVRDAARLLGALAGGDARDSATASAPAPADYVAALDANALRGAR 298 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 299 LGIARAYFTGH--DEVDVQIERAIAEMKRLGAVVIDPVDLPKADYEEDEKVVLLHEFKHG 356 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP++ +P LA D + + R +++ FGQE Sbjct: 357 LPSWLRTFAPHARVRTLA--DVIAFNARQHAREMPY---------FGQE----------- 394 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEE 420 L ++ L A R + R A ++G +D ++ PT T A+ + Sbjct: 395 LLLHAQEAGGLDAAAYRDALARCGRRARDEGLARVLREHRLDALVAPTEGT-AWLIDLIN 453 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +SG D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G Sbjct: 454 GDSG------GDGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAF 506 Query: 481 EKEAGYFR 488 E+ + R Sbjct: 507 EQATQWRR 514 >gi|192290050|ref|YP_001990655.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1] gi|192283799|gb|ACF00180.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1] Length = 601 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 110/419 (26%), Positives = 188/419 (44%), Gaps = 46/419 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD G+ T A ++P +++T KL GA+++GK N+D+FA G Sbjct: 66 LYGVPVAVKDNIDVAGLTTTAACPAF-AYQPAHDATAVAKLRAAGAIVIGKTNLDQFATG 124 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG P +M S PGGSS GS+ AV L S+GTDT GS R PA Sbjct: 125 LVGVRSPYG---VPRNAMRS--DLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAML 179 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KP+ G S G++ +LD I T D+ L+ + G D D PV Sbjct: 180 NNIVGLKPSLGMISTTGVVPACRTLDCVSIFALTTDDAMTALRVMTGPDAEDPFSRERPV 239 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQY 309 A+ + + +G+P + +L + + + +++ + + GA++VEI Sbjct: 240 ----AAVTAIPKRVRLGVPPQDQLQFFGDDLAARGYEEAVERWRKLGAELVEID------ 289 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ-----EVKHRIM 364 + P Y+ R L EG + E Y R + Q V +I Sbjct: 290 -------VEP--------LYETAR--LLYEGPWVAERYLTIRELLETQPDAVHPVTRQIT 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + LS+ + R + +R + + F G+D ++ PT PT A+ + + + Sbjct: 333 LAGAKLSAADTFAALYRLQALRKIAEHSFA-----GIDALVLPTAPT-AYTVEQVLTDPI 386 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ +T VN+ L +++PA++ +P G+ L+ R+ L +G++ + Sbjct: 387 TLNSRLG-TYTNFVNLLDLCGLALPASIRSDGIPFGITLLAPAGRDAELAGLGRVFHAD 444 >gi|307268454|ref|ZP_07549832.1| amidase [Enterococcus faecalis TX4248] gi|306515261|gb|EFM83798.1| amidase [Enterococcus faecalis TX4248] Length = 482 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 136/517 (26%), Positives = 224/517 (43%), Gaps = 82/517 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S +K G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKKAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYE-RALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P+ +++ Q ++ + P R+ SP + +Q +L AG +I+E Sbjct: 229 APYQAPLAEWQTHTKKQRLKIALCTASPIGSRI---SPEATQAAKQAADFLAAAGLEIIE 285 Query: 302 ISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEV 359 I P AL +YY ++ AE + A + ++ GL R K+ +E + T FGQ Sbjct: 286 IPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWTMH-QFGQ-- 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +I TYV S + +D + E Q D+ L+PTT SA P E Sbjct: 340 --KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTAFSA-PKINE 384 Query: 420 ENNSGSMGH----------------IYN--------DVFTVAVNMAGLPAISVPAALCEK 455 + S + IY+ +T N+ G PAIS+P + Sbjct: 385 DLQSEHIRQRMEQAAELTAAELAELIYDYFDKSLQLTPYTQLANLTGQPAISLPTHVTAT 444 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 445 GLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|306846212|ref|ZP_07478774.1| amidase [Brucella sp. BO1] gi|306273463|gb|EFM55324.1| amidase [Brucella sp. BO1] Length = 462 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 139/498 (27%), Positives = 222/498 (44%), Gaps = 50/498 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLD--YLSPTIDKT---WQQGISWL 292 D D ++LP D + LD ++G+ +G+ LD + P D+T + Sbjct: 231 DRRDG--MSLPYKDIDWMNLDIEVKGLKIGL----WLDAGFGEPVGDETRAAVEAAAKLF 284 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTR 351 DAGA II P N DG+ R+ DI +M + Sbjct: 285 ADAGA------------------IIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQ 326 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++ I T + YL ++ + R+ A + D I++PT P Sbjct: 327 A-----KILPYIYQWTETAEGLSGEEVYLGFAQMDAM--RNAALAASKEFDFIISPTAPM 379 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +P + + FTVA+NM+ PAIS+ EK +P+GLQ+ GQ F + Sbjct: 380 PTYPAEWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTEKGLPIGLQIFGQRFDDL 439 Query: 472 TLFSVGQIIEKEAGYFRP 489 + + + E RP Sbjct: 440 GVLRLAKAYEDMRPVQRP 457 >gi|33322003|gb|AAQ06720.1|AF496064_1 glutamyl-tRNA amidotransferase subunit A [Lactobacillus delbrueckii subsp. lactis] Length = 114 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 80/112 (71%) Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 +AAVA A++G+DTGGSIRQPASF G GIKPTYGR SR G+I+FA SLDQ G++++ Sbjct: 1 AAAVASGEVVAALGSDTGGSIRQPASFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVMSK 60 Query: 224 TVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 V+DSA +L IAG D+ DAT VPDY L + ++G+ V +PKEY D Sbjct: 61 RVKDSAEVLNVIAGADDRDATVSEKEVPDYTSFLGKDVKGLRVAVPKEYMSD 112 >gi|217424319|ref|ZP_03455818.1| peptide amidase (Pam) [Burkholderia pseudomallei 576] gi|217392784|gb|EEC32807.1| peptide amidase (Pam) [Burkholderia pseudomallei 576] Length = 528 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 151/488 (30%), Positives = 230/488 (47%), Gaps = 64/488 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I I+ ++NA IE+ A A A D G AR L G+ + +KD AT + Sbjct: 61 IARIDRDGPRLNAIIEL-NPDAEAIAHALDAERAAGVARGPLHGVTVALKDNIATGDRMS 119 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 120 TTAGSLALDGVRATRDAHLVARLRRAGAVIVAKANLSEWANFRSTRSTSGWSARGGLSRN 179 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A S+GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 180 PYALDR-TTSGSSSGSAAAVAAGLVAVSVGTETDGSIVSPAAINGCVGLKPTLGRVSRDG 238 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTVRD+A LL A+AG D D AT DY ALD +++G Sbjct: 239 IVPVSHTQDTAGPIARTVRDAARLLGALAGGDARDSATASAPAPADYVAALDANALRGAR 298 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 299 LGIARAYFTGH--DEVDVQIERAIAEMKRLGAVVIDPVDLPKADYEEDEKVVLLHEFKHG 356 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP++ +P LA D + + R +++ FGQE Sbjct: 357 LPSWLRTFAPHARVRTLA--DVIAFNARQHAREMPY---------FGQE----------- 394 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEE 420 L ++ L A R + R A ++G +D ++ PT T A+ + Sbjct: 395 LLLHAQEAGGLDAAAYRDALARCGRRARDEGLARVLREHRLDALVAPTEGT-AWLIDLIN 453 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +SG D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G Sbjct: 454 GDSG------GDGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAF 506 Query: 481 EKEAGYFR 488 E+ + R Sbjct: 507 EQATQWRR 514 >gi|76819205|ref|YP_336611.1| amidase [Burkholderia pseudomallei 1710b] gi|254187003|ref|ZP_04893518.1| Tat (twin-arginine translocation) pathway signal sequence/amidase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254264819|ref|ZP_04955684.1| Tat (twin-arginine translocation) pathway signal sequence/amidase domain protein [Burkholderia pseudomallei 1710a] gi|76583678|gb|ABA53152.1| amidase family protein [Burkholderia pseudomallei 1710b] gi|157934686|gb|EDO90356.1| Tat (twin-arginine translocation) pathway signal sequence/amidase domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254215821|gb|EET05206.1| Tat (twin-arginine translocation) pathway signal sequence/amidase domain protein [Burkholderia pseudomallei 1710a] Length = 528 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 151/488 (30%), Positives = 230/488 (47%), Gaps = 64/488 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I I+ ++NA IE+ A A A D G AR L G+ + +KD AT + Sbjct: 61 IARIDRDGPRLNAIIEL-NPDAEAIAHALDAERAAGVARGPLHGVTVALKDNIATGDRMS 119 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 120 TTAGSLALDGVRATRDAHLVARLRRAGAVIVAKANLSEWANFRSTRSTSGWSARGGLSRN 179 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A S+GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 180 PYALDR-TTSGSSSGSAAAVAAGLVAVSVGTETDGSIVSPAAINGCVGLKPTLGRVSRDG 238 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTVRD+A LL A+AG D D AT DY ALD +++G Sbjct: 239 IVPVSHTQDTAGPIARTVRDAARLLGALAGGDARDSATASAPAPADYVAALDANALRGAR 298 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 299 LGIARAYFTGH--DEVDVQIERAIAEMKRLGAVVIDPVDLPKADYEEDEKVVLLHEFKHG 356 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP++ +P LA D + + R +++ FGQE Sbjct: 357 LPSWLRTFAPHARVRTLA--DVIAFNARQHAREMPY---------FGQE----------- 394 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEE 420 L ++ L A R + R A ++G +D ++ PT T A+ + Sbjct: 395 LLLHAQEAGGLDAAAYRDALARCGRRARDEGLARVLREHRLDALVAPTEGT-AWLIDLIN 453 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +SG D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G Sbjct: 454 GDSG------GDGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAF 506 Query: 481 EKEAGYFR 488 E+ + R Sbjct: 507 EQATQWRR 514 >gi|254192614|ref|ZP_04899053.1| peptide amidase (Pam) [Burkholderia pseudomallei S13] gi|169649372|gb|EDS82065.1| peptide amidase (Pam) [Burkholderia pseudomallei S13] Length = 520 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 151/488 (30%), Positives = 230/488 (47%), Gaps = 64/488 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFAT-KGIH 88 I I+ ++NA IE+ A A A D G AR L G+ + +KD AT + Sbjct: 53 IARIDRDGPRLNAIIEL-NPDAEAIAHALDAERAAGVARGPLHGVTVALKDNIATGDRMS 111 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 112 TTAGSLALDGVRATRDAHLVARLRRAGAVIVAKANLSEWANFRSTRSTSGWSARGGLSRN 171 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A S+GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 172 PYALDRTT-SGSSSGSAAAVAAGLVAVSVGTETDGSIVSPAAINGCVGLKPTLGRVSRDG 230 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTVRD+A LL A+AG D D AT DY ALD +++G Sbjct: 231 IVPVSHTQDTAGPIARTVRDAARLLGALAGGDARDSATASAPAPADYVAALDANALRGAR 290 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 291 LGIARAYFTGH--DEVDVQIERAIAEMKRLGAVVIDPVDLPKADYEEDEKVVLLHEFKHG 348 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP++ +P LA D + + R +++ FGQE Sbjct: 349 LPSWLRTFAPHARVRTLA--DVIAFNARQHAREMPY---------FGQE----------- 386 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEE 420 L ++ L A R + R A ++G +D ++ PT T A+ + Sbjct: 387 LLLHAQEAGGLDAAAYRDALARCGRRARDEGLARVLREHRLDALVAPTEGT-AWLIDLIN 445 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +SG D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G Sbjct: 446 GDSG------GDGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAF 498 Query: 481 EKEAGYFR 488 E+ + R Sbjct: 499 EQATQWRR 506 >gi|39934538|ref|NP_946814.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009] gi|39648387|emb|CAE26908.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas palustris CGA009] Length = 601 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 111/419 (26%), Positives = 188/419 (44%), Gaps = 46/419 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD G+ T A ++P ++T KL GA+++GK N+D+FA G Sbjct: 66 LYGVPVAVKDNIDVAGLPTTAACPAF-AYQPARDATAVAKLRAAGAIVIGKTNLDQFATG 124 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG P +M S PGGSS GS+ AV L S+GTDT GS R PA Sbjct: 125 LVGVRSPYG---VPRNAMRS--DLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAML 179 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KP+ G S G++ +LD I T D+ L+ + G D D PV Sbjct: 180 NNIVGLKPSLGMISTTGVVPACRTLDCVSIFALTTDDAMTALRVMTGPDAEDPFSRERPV 239 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQY 309 A+ + + +G+P + +L + + + +Q+ + + GA++VEI Sbjct: 240 ----AAVTAIPKRVRLGVPPQDQLQFFGDDLAARGYQEALERWRKLGAELVEID------ 289 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ-----EVKHRIM 364 + P Y+ R L EG + E + R + Q V +I Sbjct: 290 -------VEP--------LYETAR--LLYEGPWVAERFLTIRELLETQPDAVHPVTRQIT 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + LS+ + R + +R + + F G+D ++ PT PT A+ + + + Sbjct: 333 LAGAKLSAADTFAALYRLQALRKIAEHSFA-----GIDALVLPTAPT-AYTVEQVLADPI 386 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ +T VN+ L +++PA++ +P G+ L+ R+ L S+G++ + Sbjct: 387 TLNSRLG-TYTNFVNLLDLCGLALPASIRSDGIPFGITLLAPAGRDAELASLGRVFHAD 444 >gi|72383822|ref|YP_293176.1| amidase [Ralstonia eutropha JMP134] gi|72123165|gb|AAZ65319.1| Amidase [Ralstonia eutropha JMP134] Length = 468 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 134/456 (29%), Positives = 209/456 (45%), Gaps = 56/456 (12%) Query: 35 ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSH 94 E S NA+ + +A AA ESD+R +G R LEG+PI +KD T+G+ T+ S Sbjct: 45 EASRKAFNAFSVIDWDRALRAAAESDRRYASGQPRLLEGLPIAVKDMIDTRGLETRYGSS 104 Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 G P ++ V + L D GA+++GK EFA G + + +G ++P +D + Sbjct: 105 AYVGHVPDTDADVVRTLVDQGAIVIGKTTTHEFAWGVTTSSEAFGDTLNP---LDRSR-- 159 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 TPGGSSGG++AA+A AA +GTDTGGS+R PA+ G G KPT G S GI AP+ Sbjct: 160 TPGGSSGGAAAAIAAGAVAAGLGTDTGGSVRIPAALCGIAGFKPTLGALSTRGIFPLAPT 219 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL 274 LD G++ + V D +L +A +G D +P+ + L + G+ L Sbjct: 220 LDHPGLLGQGVDDITVLARA-SGID----------IPESDAWLSARL-----GV-----L 258 Query: 275 DYLSPTIDKTWQQGISWLKDAGAKIVEI--SLPHTQYALPAYYIISPAEASSNLARYDGV 332 Y+ P T + A A V + +L +Y PA +A + + +G Sbjct: 259 AYVPPVPPDT------AVFSASAHAVRMLRTLFTCEYVDPADLFDGVYDAFAAIVLTEGS 312 Query: 333 RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 R E + + +E + R+ + +S R Y + R +K Sbjct: 313 VEHFRRSD-------EARMAAHYSEETRQRLDLAK-AMSLRDYARAQQTRHRFRHRLKAM 364 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV------FTVAVNMAGLPAI 446 TE +D ++ PT + P K + N S+G V +T N+AG PAI Sbjct: 365 MTE-----LDYLVLPT--CACLP-PKLDANVASIGAWSGTVRQALMTYTAPFNVAGFPAI 416 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 S+P +P +Q++ P + L + IE+ Sbjct: 417 SIPLWSAGCALPAAMQIVAHPGDDGALLKIAAEIER 452 >gi|192290373|ref|YP_001990978.1| amidase [Rhodopseudomonas palustris TIE-1] gi|192284122|gb|ACF00503.1| Amidase [Rhodopseudomonas palustris TIE-1] Length = 449 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 207/470 (44%), Gaps = 55/470 (11%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIK 79 +A +LV+ + I + + A+I V A AA+ DK R GIPI IK Sbjct: 20 TARKLVEDCLARIADPAGEGARAFIHVDRDAALQAADAMDKLRASKAAPSPFAGIPISIK 79 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F KG T+A S LD P ++ +L G V++G+ NM EFA +Y Sbjct: 80 DLFDIKGQVTRAGSRALDDNPPADSDAPAVARLRRAGFVVIGRTNMTEFAYSGIGINPHY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P + + PGGSS G++ +VA + A +GTDTGGS R PA+F G VG KP Sbjct: 140 G---TPKAAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIPAAFNGIVGYKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-PDYERAL 257 + R R G + + SLD G + R V A L DA + PV P R L Sbjct: 197 SQYRVPRDGAVPLSFSLDSIGPLARGVECCATL----------DAILADQPVGPLIVRPL 246 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 +GM + +P LD L + +++ + L GA I +I +P + + Sbjct: 247 ----KGMRIAVPTTVALDDLDAAVTAAFERALKTLASHGAIIEKIEVPE-------FAEV 295 Query: 318 SPAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 P A A Y RY + +G ++Y+ V+ RI+ G ++ Sbjct: 296 GPLGAKGGFAAAESYAWHRYLIVAQG----DVYD--------PRVRERILRGETQSAADY 343 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGHIYNDV 433 D + ARK +LI R A D + PTT +A + + ++ + + ++ Sbjct: 344 VD--LVNARK--SLIAR--ASARLAPYDAVAMPTTAIAAPTIAELADDKAFTKANLLTLR 397 Query: 434 FTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 +NM AIS+P C + + P+GL L G + +F V +E Sbjct: 398 NCTLINMIDGCAISLP---CHQDGEPPIGLMLAGVNGTDREIFEVAAGME 444 >gi|326519260|dbj|BAJ96629.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 609 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 216/470 (45%), Gaps = 44/470 (9%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S + + V++ ++ A+E S+ M +I + AEES R G ++G Sbjct: 148 SGETTPVQVAKRFLAAVEESSGPTMNMAFFISCNPEDVLKQAEESTLRYQTGTPLSVMDG 207 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + + +KD T + L R ++ +L GA++ GK NM E G+S Sbjct: 208 VLVAVKDEIDCLPYPTTGGTRWLGKARACEADAACVAQLRACGAILAGKTNMHELGAGTS 267 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G +P+ + K G SSG ++ AG LC ++G D GGS+R PA+ G Sbjct: 268 GINPHHGSARNPY----NVGKVAGGSSSGSAAVVCAG-LCPVALGVDGGGSVRMPAALCG 322 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPT GR S G++ ++ AGI+ TV D+ + AI + L +P Sbjct: 323 VVGFKPTAGRLSNAGVLPLNWTVGMAGILAGTVEDAVVAYSAIVDQSQPSYLRPELNLPM 382 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYAL 311 SI + + ++ D S I + + L+ G + +++++P + Sbjct: 383 LTST--PSISNVRLAKYGKWFNDS-SEDIRSCCDKALQTLRTQYGWETLDVTVPEIEEMR 439 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY-VL 370 A+Y+ +E +++LA+Y D L+ E G +V R+ + Y Sbjct: 440 LAHYVTIGSECTASLAKY-----------LDKLKRSE------IGWDV--RVALAVYGSF 480 Query: 371 SSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 SSR Y +S LR R++ F + + DVI++P T +A+ L + +SG + +I Sbjct: 481 SSRAYLNSQRLRNRQMF------FHKEIFKTADVIVSPMTGVTAYTLQDDALSSGELDYI 534 Query: 430 YNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 +++A N GLPAI+V + +P+GLQ IG+P+ E TL + Sbjct: 535 NGAALIRYSIAGNFLGLPAITVMVGQDKGGLPIGLQFIGRPWSEATLLHI 584 >gi|163743409|ref|ZP_02150789.1| amidase family protein [Phaeobacter gallaeciensis 2.10] gi|161383403|gb|EDQ07792.1| amidase family protein [Phaeobacter gallaeciensis 2.10] Length = 442 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 133/470 (28%), Positives = 207/470 (44%), Gaps = 57/470 (12%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGI 78 DI V L +Y+ AI+ + Y V +A A AE + +R +G L +G+PI Sbjct: 20 DICPVALTKTYLNAIDAHPHRDRIYTVVTHDRALAEAEAARQRAADGQRLSLLDGVPISW 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETS 136 KD F + I T++ S +L P ++ V + GAV LGK +M E A N Sbjct: 80 KDLFDSATIATESGSDLLANRIPDRDALVLRSATAMGAVCLGKTHMSELAFSGLGLNPVK 139 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 P I D PGGSS G++ +VA L A IG+DTGGS+R PA++ VG+ Sbjct: 140 ATPPCIH-------DDAAAPGGSSSGAATSVAFGLAACGIGSDTGGSVRIPAAWNDLVGL 192 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G++ D G + R+V D+A+ L + G PD A Sbjct: 193 KTTSGRISLEGVVPLCLRFDTVGPLARSVEDAALYLGVLEGNHG----------PDLRGA 242 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 S+ G L+P + + + L+ AGA+I+ + +P + A+ + Sbjct: 243 ---SLAGKRFADLWTVAQQDLAPEVANAHSKALDRLRAAGAEIIPLEVPVLEEAMALSAV 299 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + +EA YGL KD++E + E+ R G S Y Sbjct: 300 LFTSEA-----------YGLW---KDVIEAAPDL----MFPEILERFRSGAG-FSGPDYV 340 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF-- 434 + + + + R + D A G D IL PT+P P S +I++++ Sbjct: 341 AAWAKLEQFR--MDWDLATA---GFDGILCPTSPI--LPPNVARLQSDHDYYIHSNLMAL 393 Query: 435 --TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T N+ GL A+++P + GLQ++GQP E+ L +G +E+ Sbjct: 394 RNTRIGNLMGLCALTLPTGVPS----CGLQILGQPECEDALLRIGVAVER 439 >gi|149378051|ref|ZP_01895774.1| amidase [Marinobacter algicola DG893] gi|149357661|gb|EDM46160.1| amidase [Marinobacter algicola DG893] Length = 490 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 230/505 (45%), Gaps = 43/505 (8%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + +E L++ +++V + ++ I N +NA + + + A A ++D+ + Sbjct: 3 YRPATELVSDLKNGKLTSVGITQVFLDRIRQCNDDINAVVTLDEKNALGKARKADEALAR 62 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 GD+ L G+P+ +KD + G+ A + L P + V Q+L D GA++LGK N+ Sbjct: 63 GDSLGPLHGLPLTLKDTWEVAGMACTAGAPALKNHIPAKHADVVQRLEDAGAIILGKTNV 122 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 +A + +G +P TPGGSSGG++AA+A + +G+D GSI Sbjct: 123 PIYATDLQSYNKLFGVTNNP-----HNPAHTPGGSSGGAAAALAAGMTPLEVGSDLAGSI 177 Query: 185 RQPASFTGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGY 238 R PA F G G KP+ S G I P L + G + R+ +D +LL IAG Sbjct: 178 RTPAHFCGVFGHKPSRALVSFRGHIPGPPGTESRPDLAEGGPLARSSKDLELLLSVIAGP 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + L + A QS++ VG+ + L + + +Q+ L+ GA Sbjct: 238 AARERNSWQLAM---APATIQSLEQARVGLWLQDPLCAIDNELLNGYQKLGRELESKGAL 294 Query: 299 IVEI--SLPHTQYALPAYYIISPAEASSNL--ARYDGVRYGLRVEGKDILEMYENTRSIG 354 + E L + ++ LPAY+ + + S+++ A+ + + R+E L ++ + Sbjct: 295 VAEARHQLLNLEHILPAYFNLLGSLLSTSMKPAQRRQMMWISRLE--RWLHLFGPVTAF- 351 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 IG Y ++ ++R ++ + T F++ DV+LTP TPT+A Sbjct: 352 ----------IGEYGRGVNQPVHQWMSWSEMREKMRAEITTLFDE-FDVLLTPITPTTAI 400 Query: 415 ------PLGKEENNSGSMGHIYNDVFT--VAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P+ K + Y D F + GLPA SVP ++ +P +Q+IG Sbjct: 401 RHDHSSPVFKRQIIVAGQPRAYMDQFCWIALATLLGLPATSVPIGKTKQGLPFNVQVIGA 460 Query: 467 PFREETLFSVGQIIEKE--AGYFRP 489 P + T +++E E AG+ +P Sbjct: 461 PGSDLTTIRFAELLEAEGLAGFQQP 485 >gi|218532716|ref|YP_002423532.1| amidase [Methylobacterium chloromethanicum CM4] gi|218525019|gb|ACK85604.1| Amidase [Methylobacterium chloromethanicum CM4] Length = 469 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 131/489 (26%), Positives = 214/489 (43%), Gaps = 43/489 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +++ F + + +R++ +S VE+V +++ IE + ++NA + V AA E Sbjct: 3 TDIVFSDATRLAELIRTRQVSPVEVVQAHLDRIEAVDPKVNAIVTVAEGALAAAKEAEAA 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + + L G+P +KD T G+ TQ S I G P ++T +L G ++L K Sbjct: 63 VLAGAELGPLHGVPFTVKDSIDTAGVLTQRGSPIFKGRTPDADATSVARLKKAGGILLAK 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EF+ ++ G + W D T TPGGSSGG SAA+A + +GTD Sbjct: 123 TNLPEFSYWIESDNLLSGRSNNHW---DLTR--TPGGSSGGESAAIAAGMSPLGLGTDLA 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDE 240 S+R A+ TG V +K T+GR GI AP G + R++RD A+ +AG D Sbjct: 178 ISVRGSAAQTGIVSLKATHGRVPMTGIWPRAPRRFWHVGPMARSIRDLALAFSQLAGPDG 237 Query: 241 CDATCVNLPVP---DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 DA + VP A D+ ++ G VG P +D + T + LK Sbjct: 238 QDAFATST-VPFNAGLGAAPDRKLRVGWMVG-PGFGPIDT---EVAATVRAAAEALKSED 292 Query: 297 AKIVEISLPHTQ--YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 + E+ +P + +AL + + E + G+ E+Y R+ Sbjct: 293 HHVEEVRIPALERDFALDVFNKLHVMEMKPAFREA--------IAGRPEDEIYTMART-- 342 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 M+ S Y + A ++R D A+ + DV+LTP P A Sbjct: 343 ---------MLSLPDTSMEDYVAAEQAAERLR-----DGYAAYFRDYDVLLTPVLPVPAH 388 Query: 415 PLGKEE--NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 G E N ++ Y TV +N+ GLP +S+ + +P+ +QL+G E T Sbjct: 389 KHGISELVVNGETVDLTYLQGATVPLNVTGLPGLSMRFGTSREGLPINVQLVGSWQAETT 448 Query: 473 LFSVGQIIE 481 + ++E Sbjct: 449 ILHAASVLE 457 >gi|88802665|ref|ZP_01118192.1| amidase [Polaribacter irgensii 23-P] gi|88781523|gb|EAR12701.1| amidase [Polaribacter irgensii 23-P] Length = 549 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 106/424 (25%), Positives = 193/424 (45%), Gaps = 59/424 (13%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA---- 128 G+PI +KD T+ + T A + +L + ++ + QKL + GA++LGK N+ E+A Sbjct: 159 GMPILLKDNINTRDMATTAGAIVLAENKDTKDAFIVQKLREKGALILGKANLSEWAYFFC 218 Query: 129 ----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 +G S + G ++P+ F GGSS GS +A A++GT+T GSI Sbjct: 219 SGCPLGYS---AIGGQTLNPY----GRGVFETGGSSAGSGVTIAANFAVAAVGTETSGSI 271 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P+S VG+KPT G SR GI+ + +LD G +T+ V D+AI + A+ G+D D Sbjct: 272 TSPSSLNSIVGLKPTIGVLSRTGIVPISSTLDTPGPMTKNVIDNAIFMNAMRGFDRRDTA 331 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + ++ + + +G+ +G+ K S D ++ ++ LK G IVEI+ Sbjct: 332 SKKIDQDYFQNGFNTNFKGIRLGVLK-------SLLSDSIYRTTVAKLKKEGVVIVEITP 384 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSI---GFGQEV 359 P + + + + +L Y + K + + ++ + SI +GQ++ Sbjct: 385 PEISFE--GFTTLLNIDMKHDLPSYLSENAAKNISVKSVADVVLFNSQDSILRAPYGQQL 442 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGK 418 I+ L + ++A ++ + + A ++ +D IL Sbjct: 443 FDGIVADNTTLE----ELELIKANLMQE--GKKYLHALKDEKIDAIL------------- 483 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S+ + ++ + VA + P ++VP + P+ L +G PF E L +G Sbjct: 484 ------SINNYHSGIAAVAKH----PTLTVPMGYRKSGEPVSLTFVGTPFSERRLLEIGY 533 Query: 479 IIEK 482 I E+ Sbjct: 534 IFEQ 537 >gi|307287331|ref|ZP_07567395.1| amidase [Enterococcus faecalis TX0109] gi|306501664|gb|EFM70958.1| amidase [Enterococcus faecalis TX0109] gi|315166051|gb|EFU10068.1| amidase [Enterococcus faecalis TX1302] Length = 482 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 132/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S +EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSRIELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL + P + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSLILPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+E P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIETPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|229102694|ref|ZP_04233394.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock3-28] gi|228680702|gb|EEL34879.1| Glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (Glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Rock3-28] Length = 412 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 126/434 (29%), Positives = 194/434 (44%), Gaps = 55/434 (12%) Query: 71 LEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 + GIP+ +KD T +HT A + L+ ++ + KL + GAV++GK NM E A Sbjct: 1 MHGIPVLLKDNIETNDSMHTSAGTIALEQNISSEDAFLVTKLREAGAVIIGKTNMTELAN 60 Query: 130 GSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S E ++ G I+P+ + TD GGSS G++ AVA S+GT+T SI Sbjct: 61 AMSFEMWAGYSARGGQTINPYGT--GTDDMFVGGSSTGAAIAVAANFTVLSVGTETDASI 118 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA + VGIKPT G SR GII F S D AG RTV D+AILL ++ G DE D Sbjct: 119 LSPAVQSSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDVA 178 Query: 245 CVN---LPVPDYERALD-QSIQGMTVGI----PKEYRLDYLSPTIDKT-WQQGISWLKDA 295 + DY LD ++G +G+ PK+Y Y + D+ ++ I L+ Sbjct: 179 THKSEGMAYEDYTSYLDVNGLKGAKIGVYSNAPKDY---YENGEYDENLFEDTIQVLRSE 235 Query: 296 GAKIVE-ISLP--HTQYA--LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 GA +VE I +P H +++ +P Y E +L Y + + ++ + Sbjct: 236 GATVVENIDIPSFHREWSWGVPLY------ELKHSLDNY-------LSKLPSTIPVHSIS 282 Query: 351 RSIGFGQEVKHRIM-IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + F + + R + G L R + LR + D + +QG+D L Sbjct: 283 ELMAFNKNIAERALKYGQTKLEGRKDYPNTLRNPEYLHARLEDIYFSQKQGIDFALEKYN 342 Query: 410 PTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 + FP + + + AG P+I++PA E P G+ + F Sbjct: 343 LDAILFP---------------SYIGSTICAKAGYPSIAIPAGYMENGRPFGITIASTAF 387 Query: 469 REETLFSVGQIIEK 482 RE L + E+ Sbjct: 388 REGILIKLAYAFEQ 401 >gi|295106785|emb|CBL04328.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Gordonibacter pamelaeae 7-10-1-b] Length = 467 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 135/479 (28%), Positives = 210/479 (43%), Gaps = 52/479 (10%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCF--- 82 +D I AIE N +NA+ +ARA A E++K ++ GDA GIP KD Sbjct: 1 MDDCIAAIEARNPSINAFTYTAFDEARAKAIEAEKVLMRGDADGAFFGIPTAAKDFLPGV 60 Query: 83 -----ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 T G+ +A SH D P Y T+ + D GA+++GK N FA + + Sbjct: 61 PGWPGTTGGV--KALSHQKD---PGY-GCFTKAMVDEGAILVGKTNAPSFAFRGTCDNKM 114 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +P++ + GGSSGGS+AAV + + GTD GGSIR PA++ G G K Sbjct: 115 FGATSTPFKV-----GYNSGGSSGGSAAAVGDGILLVAEGTDGGGSIRIPAAWCGCYGYK 169 Query: 198 PTYGRCS---RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 + G R S G ++RTV+DSA +L+A+A +D D ++ D+ Sbjct: 170 ASVGTIPATVRPNAFSLTHPYTWDGPLSRTVKDSAYVLQAMARFDPFDPVSLDRGERDFA 229 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI--VEISLPHTQYALP 312 ALD+ ++G +G ++ + + P I +AGA + VE + + + L Sbjct: 230 AALDKPLKGWRIGFTPDFGIFPVDPEIKDMVAAAAQRFVEAGAVVEPVEFDISRSHFEL- 288 Query: 313 AYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AEA L G+ L+ G D+L + + F + G YV Sbjct: 289 -------AEAWCRLISISGLESIEALKGGGIDLLRDHADDVPAEFVYWINDAYRRG-YV- 339 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-------LGKEENNS 423 Y +RT I AF Q D++++P T P G E Sbjct: 340 -------DYNADDVVRTEIYDALQTAF-QTYDLVISPVTACHPVPNVPGGITAGPTELGG 391 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + T N G PA S+PA L + P+G+Q+IG+ + +E + + E+ Sbjct: 392 EKVEPLIGWCLTYFCNFTGHPAASIPAGLSKDGFPVGMQIIGRRWADEDVLAASAAFER 450 >gi|212538143|ref|XP_002149227.1| amidase, putative [Penicillium marneffei ATCC 18224] gi|210068969|gb|EEA23060.1| amidase, putative [Penicillium marneffei ATCC 18224] Length = 518 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 126/449 (28%), Positives = 209/449 (46%), Gaps = 50/449 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + +KD A G+ + + P ++TV ++ D G ++ GK + + G Sbjct: 87 LKGKTVCLKDNIAVAGVPCLLGTDTFQDWIPKTDATVVTRILDAGGIITGKAVCENLSRG 146 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + + T+ GPV +P+ S SS G++A VA IG D GGSIR PAS Sbjct: 147 AVSATAATGPVHNPYAPGYSAGG-----SSSGTAALVASGATDMGIGCDQGGSIRIPASL 201 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVN 247 G G KPT G GI S LD G +T T D+AILL+AIAG D D Sbjct: 202 CGLYGFKPTAGLVPYTGIASNDACLDYVGPMTTTCLDNAILLEAIAGVDGLDDRQTAGAP 261 Query: 248 LP--VPDYERALDQS----IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 P VP+Y + L+++ I+G+ +GI KE L ++P ++ +Q ++ + GA + Sbjct: 262 FPKQVPNYAQLLEETKEDGIKGLKIGILKEGLDLPGINPRVEAKFQDAMNVFRRLGATVE 321 Query: 301 EISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ +P H+Q + L + G R + + +++E + + + EV Sbjct: 322 DVHIPIHSQARTVIVVLSKMGNHMGMLGKATGRRQMM------LTDLFEK-KGLPYTPEV 374 Query: 360 --KHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAFEQGV---DVILTPTTPTS- 412 K +M +++ HY K+ LI R +A+++ + DV++ PTT T Sbjct: 375 LSKMSVMSKEGLIAGEYAWKHYSTLYPKVVNLI-RKLQDAYDKALGEYDVLVMPTTITES 433 Query: 413 -------AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPL 459 A PL E+ S G + N T N +G PA++VP L + MP Sbjct: 434 NTLPAADATPL---EHMDASKGKLEN---TSPFNASGHPALAVPIGLVPSRENPTITMPT 487 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +Q++G+ + E T+ + E+E G ++ Sbjct: 488 SMQIVGRYWDELTILKIAYAWEREVGNWK 516 >gi|302781566|ref|XP_002972557.1| hypothetical protein SELMODRAFT_441847 [Selaginella moellendorffii] gi|300160024|gb|EFJ26643.1| hypothetical protein SELMODRAFT_441847 [Selaginella moellendorffii] Length = 489 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 139/499 (27%), Positives = 235/499 (47%), Gaps = 57/499 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRIING 66 +V E + RS +++ ELV Y+ I + N +NA I++ A A ++ +R + Sbjct: 27 SVEEIQQAFRSGSLTSRELVGFYLDRIAHLNPTLNAVIQLNPDALALADEADAQRRQSSA 86 Query: 67 DARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A+ L GIP+ +KD AT + T A S L G + ++ + +L GA++LGK N+ Sbjct: 87 VAQGLHGIPVLLKDSIATADRMGTTAGSLALLGSKVPRDAGIVARLRRAGAIILGKTNLS 146 Query: 126 EFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E+ S+N TS + + ++ + D+ +P GSS GS+ AVA + + S+GT+T GSI Sbjct: 147 EWMNFRSTNSTSGWSALGGQTKNPYNLDE-SPCGSSSGSAVAVAANMVSVSVGTETDGSI 205 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P+S VGIKPT G SR G I + + D G I R+V D+ +L AIAG D D Sbjct: 206 LCPSSVNAVVGIKPTVGLTSRAGAIPISHTQDTVGPICRSVADAVAVLDAIAGADPRDRQ 265 Query: 245 CV----NLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + +P Y++ L ++ ++G+ R D ++ ++ IS K GA I Sbjct: 266 TLFISKYIPRGGYKQFLRRNGLRGI--------REDTIAAV-----EKMISIAKSRGAVI 312 Query: 300 VE-ISLPHTQYALPA----YYIISPAEASSNLARYDGVRYGLRVEGKDILEM---YENTR 351 VE ++LPH L +++ + N V+ +R +D+++ + + Sbjct: 313 VENLTLPHADETLSGVSEDLVLLTNFKVELNQYLAQLVKSQVR-SLEDVIKFNIQHADKE 371 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 FGQE T++ S +H +D+ EA ++ + LT Sbjct: 372 MKLFGQE--------TFLESQATKGTH-----------SKDYKEAVKR--NQFLTKHGID 410 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-LCEKKMPLGLQLIGQPFRE 470 F K + G+M + T +AG PAI++PA + +P G+ ++G E Sbjct: 411 HLFETHKLDALIGAM----PSLMTAPAAIAGYPAITIPAGYVSSTGVPFGIGILGSKGSE 466 Query: 471 ETLFSVGQIIEKEAGYFRP 489 TL + +E+ +P Sbjct: 467 PTLIEIAFDLEQATLVRKP 485 >gi|167565605|ref|ZP_02358521.1| amidase [Burkholderia oklahomensis EO147] Length = 476 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 134/478 (28%), Positives = 208/478 (43%), Gaps = 38/478 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N +NA + + A A A + D + G+ A L G Sbjct: 10 IRRKDVSCVETMRAYLAHIERVNGDVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 69 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP KD TK I T S I RP ++ V +++ GAV +GK N F +GS Sbjct: 70 IPQAPKDLAMTKDIVTTLGSPIFRTMRPSADALVVERMRAAGAVFVGKTNTPAFGLGSHT 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 130 FNEVYGATRNPYGLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 184 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A+LL AGYD D + Sbjct: 185 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVALLLAIQAGYDRRDPLSLAEDPQR 244 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ P + + L+ G + A Sbjct: 245 FAQSLDADLRGKRIAWVGDWN-GYLAMEPGVLALCEASFDALRAIGCDV--------DAA 295 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 LP++ SP + + + G ++L Y + Q + G + L Sbjct: 296 LPSF---SPERIWQTWLVHRHL-----LSGGNLLMHYRDPSRRALLQPEAIYEVEGLFKL 347 Query: 371 -SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSMG 427 +S YD+ R+ L T FE+ D I PT F +G + +G Sbjct: 348 GASDVYDASAARSAWYHAL-----TTFFER-YDYIAAPTAQVFPFDVGLRWPQAIAGRTM 401 Query: 428 HIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + E E Sbjct: 402 DTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEME 459 >gi|67527071|gb|AAY68340.1| putative Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [uncultured marine bacterium 66A03] Length = 449 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 134/471 (28%), Positives = 217/471 (46%), Gaps = 49/471 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + SE ++R ++A+E+ + + +I ++++++ A+ V A AE DK Sbjct: 1 MFSASEILSKIRIGQLTALEVTHACLNSINSTDNELMAWAHVNRDFAIERAENLDKLQSE 60 Query: 66 GDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G A L GIPIGIKD GI T S IL G P+ + + Q L GAV++GK Sbjct: 61 GKAIGRLHGIPIGIKDIIDIAGIPTTCGSPILLGSIPNNSARIIQLLEAEGAVIIGKTVT 120 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA + ++T +P ++D ++PGGSS GS+AAVA ++G+ T GS+ Sbjct: 121 TEFAFMNPSKTK------NP-HNLD----YSPGGSSAGSAAAVAAGHVPITVGSQTNGSV 169 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 +PASF G G+KP+ G R+G++ + LDQ G+ + D ++ +A YD D Sbjct: 170 IRPASFCGVFGLKPSAGIIPRVGVLETSDLLDQIGVFANHIEDLTLICDVLAQYDNRDPQ 229 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEI- 302 + P ++ L+ ++ I DY+ +D + G L + G ++ +I Sbjct: 230 SFSSSRPIFQNGLN--LKKRADPIFGAVSFDYMD-NLDADMKAGFDKLVSSLGNRVQKID 286 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 + P T L A+ II + NL Y ++ ILE E Sbjct: 287 ARPFTSTFLDAHKIIHEFQIFQNLGHY--LKSNSNELSAPILEALER------------- 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 +S + + +A +R + F F + DVI+TP+ A PL E Sbjct: 332 --------ASIIQNDEFKKAVTVRNEASKFFENLFSR-FDVIVTPSALGKA-PLLSESTT 381 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 N V ++ GLP I++P L E ++PLG+QL+G +E L Sbjct: 382 G-------NPVCCTIWSLTGLPCINLPLLLGENELPLGIQLVGNYTADEKL 425 >gi|225686762|ref|YP_002734734.1| amidase [Brucella melitensis ATCC 23457] gi|256262102|ref|ZP_05464634.1| amidase [Brucella melitensis bv. 2 str. 63/9] gi|225642867|gb|ACO02780.1| amidase [Brucella melitensis ATCC 23457] gi|263091792|gb|EEZ16123.1| amidase [Brucella melitensis bv. 2 str. 63/9] Length = 462 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 135/493 (27%), Positives = 220/493 (44%), Gaps = 40/493 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++LP D + LD ++G+ +G+ +L D+ G +A A Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL-------WLDAGFDEPVGGGTRAAVEAAA 281 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFG 356 K+ A II P N DG+ R+ DI +M ++ Sbjct: 282 KLFA----------DAGAIIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQA---- 327 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ I T + YL ++ + R+ A + D I++PT P +P Sbjct: 328 -KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPMPTYPA 384 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + FTVA+NM+ PAI++ K +P+GLQ+ GQ F + + + Sbjct: 385 EWASPVNDPQRPFEHIAFTVAMNMSEQPAIAINCGYTAKGLPIGLQIFGQRFDDLGVLRL 444 Query: 477 GQIIEKEAGYFRP 489 + E RP Sbjct: 445 AKAYEDMRPVQRP 457 >gi|21241767|ref|NP_641349.1| amidase [Xanthomonas axonopodis pv. citri str. 306] gi|21107139|gb|AAM35885.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas axonopodis pv. citri str. 306] Length = 509 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 146/487 (29%), Positives = 219/487 (44%), Gaps = 37/487 (7%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 R+ S S+++L +Y+Q +I+ + ++NA +E+ Q A A A D G R Sbjct: 7 RMASGQSSSLQLTRAYLQRIASIDRAGPRLNAVVELNPQ-AEADARALDAERKAGHVRGP 65 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + A S L FRP ++ V Q+L GAV+LGK N+ E+A Sbjct: 66 LHGIPVLLKDNIDALPMVNSAGSLALAEFRPDRDAFVVQRLRAAGAVILGKTNLSEWANF 125 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ++S P GSS G+ AA+A L IGT+T GSI PAS Sbjct: 126 RSTQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAASLATVGIGTETDGSITCPASV 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA D D P Sbjct: 186 SGLVGLKPTVGLVSRDGIIPISTSQDTAGPMTRSVADAAAVLQAIAAPDPQDPATARAPA 245 Query: 251 P--DYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 DY L S++G +G+ + R D P I + + L+ AGA +VE +L Sbjct: 246 TSVDYLAHLKPDSLRGARLGLLRNPLRED---PAIATALDRAVQTLRAAGATVVETALVT 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN--TRSIG-FGQEVKHRI 363 A ++ E + L Y + + ++ N R + FGQE+ + Sbjct: 303 DGKWDAAEQMVLLVEFKAGLNAYLQNHHTPVATLQQLIAFNRNHAQREMPYFGQELFEQA 362 Query: 364 MIGTYV-----LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-AFPLG 417 + LS+R I +K D +D ++ PTT + LG Sbjct: 363 QAAPGLDDAGYLSARANAKRLAGPEGIDAALKADR-------LDALIVPTTGAAWVTTLG 415 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 K G + A +AG P++SVP + +PLGL +G + E L + Sbjct: 416 K--------GDTFPGAGYGAAAVAGYPSLSVPMGQTQ-GLPLGLLFMGTAWSEPRLIELA 466 Query: 478 QIIEKEA 484 E+ + Sbjct: 467 YAYEQRS 473 >gi|306840938|ref|ZP_07473680.1| amidase [Brucella sp. BO2] gi|306289061|gb|EFM60323.1| amidase [Brucella sp. BO2] Length = 462 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 138/498 (27%), Positives = 222/498 (44%), Gaps = 50/498 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWVKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLD--YLSPTIDKT---WQQGISWL 292 D D ++LP D + LD ++G+ +G+ LD + P D+T + Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL----WLDAGFGEPVGDETRAAVEAAAKLF 284 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTR 351 DAGA II P N DG+ R+ DI +M + Sbjct: 285 ADAGA------------------IIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQ 326 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++ I T + YL ++ + R+ A + D I++PT P Sbjct: 327 A-----KILPYIYQWTETAEGLSGEEVYLGFAQMDAM--RNAALAASKDFDFIISPTAPM 379 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +P + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + Sbjct: 380 PTYPAEWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDL 439 Query: 472 TLFSVGQIIEKEAGYFRP 489 + + + E RP Sbjct: 440 GVLRLAKAYEDMRPVQRP 457 >gi|256960344|ref|ZP_05564515.1| amidase [Enterococcus faecalis Merz96] gi|293384317|ref|ZP_06630202.1| amidase family protein [Enterococcus faecalis R712] gi|293388447|ref|ZP_06632954.1| amidase family protein [Enterococcus faecalis S613] gi|312908517|ref|ZP_07767461.1| amidase [Enterococcus faecalis DAPTO 512] gi|312909012|ref|ZP_07767874.1| amidase [Enterococcus faecalis DAPTO 516] gi|256950840|gb|EEU67472.1| amidase [Enterococcus faecalis Merz96] gi|291078309|gb|EFE15673.1| amidase family protein [Enterococcus faecalis R712] gi|291082173|gb|EFE19136.1| amidase family protein [Enterococcus faecalis S613] gi|310625484|gb|EFQ08767.1| amidase [Enterococcus faecalis DAPTO 512] gi|311290712|gb|EFQ69268.1| amidase [Enterococcus faecalis DAPTO 516] Length = 482 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 133/525 (25%), Positives = 221/525 (42%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YG +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGSARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + I FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASIDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL +SP + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPTGSMISPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|302524487|ref|ZP_07276829.1| secreted amidase [Streptomyces sp. AA4] gi|302433382|gb|EFL05198.1| secreted amidase [Streptomyces sp. AA4] Length = 528 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 151/514 (29%), Positives = 237/514 (46%), Gaps = 70/514 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + R+ + ++A L +Y+ I + ++NA + + A A SD R Sbjct: 41 DLDRADIPSLQHRMATGQLTATRLTSAYLARIRVLDPKVNAVLALNPAAL-AQAAASDVR 99 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G R L+GIP+ +KD T T A S L RP ++T+ +L D GAV+LGK Sbjct: 100 HRTGRTRGPLDGIPVLVKDNVDTHDQQTTAGSRALRS-RPAKDATLITRLRDAGAVLLGK 158 Query: 122 LNMDEFA-MGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 N+ E+A ++ TS + G +P+ +D P GSS GS+A VA L +I Sbjct: 159 ANLSEWANFRAAKPTSGWSGVGGQTNNPY-VLD----HNPCGSSAGSAAGVAASLAQVAI 213 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G++T GSI PA T TVG KP+ G SR G++ + D AG I R V D+AI L + Sbjct: 214 GSETDGSIVCPAGMTATVGHKPSLGLVSRTGVVPISAEQDTAGPIARNVVDTAITLSVLQ 273 Query: 237 GYDECDATCVNLP---VPDYERALDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 G D D + P DY + L + +G +G+ +RL L P D + + L Sbjct: 274 GRDPSDPATLRYPSTQPTDYAKLLRPGVLRGARIGL---WRLPVLGPDTDAVVSKTKASL 330 Query: 293 KDAGAKIVEISLPH----TQYALPAY----------YIISPAEASSNLARYDGVRYGLRV 338 + AGA +VE++LP+ ++ PA Y+ + NLA D + Y Sbjct: 331 ERAGATVVEVNLPYQDRLSELEFPALLTEFHRDIDAYLATRPTGPRNLA--DLIAY---- 384 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAF 397 D LE R+ GQE+ + + + D YL+ R ++ L +R E Sbjct: 385 NRADPLE-----RTCFAGQELFEQALA-----APGPQDPTYLKNRAELTDLARRSLDETL 434 Query: 398 EQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCE 454 + +D I +PT P P K + G NDV + +AG P ++VPA Sbjct: 435 AKYDLDAIASPTNP----PAWKTDCKVGD-----NDVIPSSTPAAVAGYPDVTVPAG-SV 484 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +P+G+ +G + + G+++ A Y R Sbjct: 485 GPLPVGISFMGGQWTD------GKMLALAADYMR 512 >gi|220936247|ref|YP_002515146.1| allophanate hydrolase [Thioalkalivibrio sp. HL-EbGR7] gi|219997557|gb|ACL74159.1| allophanate hydrolase [Thioalkalivibrio sp. HL-EbGR7] Length = 614 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 130/479 (27%), Positives = 208/479 (43%), Gaps = 70/479 (14%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVV---AQKARAAAEESDKRIINGDARDLEG 73 R ++ EL+D + I + + +I V+ A A AA E + + D L G Sbjct: 18 REGRLTPAELIDEVLARIA-AQPDRHEWIRVLDRDALMAHAARLEGE----SPDTLPLYG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP IKD G+ T A + P + + V ++L + GA+ +GK N+D+FA G Sbjct: 73 IPFAIKDNIDLAGVPTTAACPAF-AYTPEHSAFVVERLIEAGALPIGKTNLDQFATGLVG 131 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 S YG + + + GGSS GS+ VA + + S+GTDT GS R PA+F Sbjct: 132 TRSPYGACANAF-----DPAYISGGSSAGSAVTVATGVVSFSLGTDTAGSGRVPAAFNNL 186 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +G+KPT G S G++ SLD I TV D+ +L A +D DA P P Sbjct: 187 IGVKPTRGLLSASGVVPACRSLDTVSIFALTVPDAERVLAVTAAFDAHDAYA--RPRPLT 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 D + G+P+ +L + + ++ + + ++ L+ G VEI Sbjct: 245 THGFDPAR--FRFGVPRAEQLQFFGNAEAERLFHEAVARLQSLGGTRVEIDF-------- 294 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-----GFGQEVKHRIMIGT 367 A ++ D R L EG + E Y T+ + G V I+ G Sbjct: 295 APFL-------------DAAR--LLYEGPWVTERYLATQPLIDEAPGELLAVTRGIIGGG 339 Query: 368 YV-LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAFPLGKE 419 ++ C+ + Y R + + EA Q VDV++TPT T +A P+ Sbjct: 340 AAPRATDCFRAQY------RLMDYKRQAEAAWQAVDVLVTPTAGTIYTIAQVNADPVRLN 393 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N +G+ +T +N+ L +++VPA +P G+ LI F + L +G+ Sbjct: 394 SN----LGY-----YTNFMNLLDLASLAVPAGFQADGLPFGITLIAPAFGDGALLPLGE 443 >gi|291299420|ref|YP_003510698.1| amidase [Stackebrandtia nassauensis DSM 44728] gi|290568640|gb|ADD41605.1| Amidase [Stackebrandtia nassauensis DSM 44728] Length = 471 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 144/474 (30%), Positives = 220/474 (46%), Gaps = 48/474 (10%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIG 77 ++IS VE + + AIE + + NAY V A A A S++R + G+ L+G+P Sbjct: 21 REISPVEATQAALDAIEERDGEYNAYCLVDPDAALATARSSEERWLEGNPIGWLDGVPAS 80 Query: 78 IKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD F ++G T S +D + + +S VT +L ++G V+LGK E + ++ Sbjct: 81 IKDMFLSEGWPTLRGSRCIDRDQDWNVDSPVTARLREHGLVLLGKTTTPELGWKAVTDSP 140 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 G +PW + T GGSSGGS AVA + S+GTD GGS+R PASF G VG Sbjct: 141 LEGITRNPWNP-----ELTAGGSSGGSGVAVAAGMGELSVGTDGGGSVRIPASFCGIVGF 195 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPT + F P L AG + R+V D A+LL +A D D T + P+ Y A Sbjct: 196 KPTGSQIPLYPASPFGP-LAHAGPMARSVDDVALLLDVLALPDYRDPTSLYPPMAAYREA 254 Query: 257 LDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + ++G+ L YLS P + + ++ L DAG VE + P + A+ Sbjct: 255 VRRDVRGLNAAY--SPNLGYLSVDPEVAQIVAAAVAKLNDAGLN-VEQADPGFADPVEAH 311 Query: 315 YIISPAEASSNLARY-----DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 ++ A A+ L + D V GLR ++++ TY Sbjct: 312 EVMWAAGAAKWLDSFPEGSADLVDRGLR-------KLWDKGL---------------TYS 349 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 S YL A +R+ I E F DV++TPT F G + + Sbjct: 350 A------SEYLDALAVRSAIGIRMGE-FHTQHDVLITPTVAIPPFKAGHDIPPGSDLSSW 402 Query: 430 YNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 F+ NM PAISVPA + +P+GLQ++G ++ + +V ++ E+ Sbjct: 403 QRWAGFSYPFNMTQQPAISVPAGFTSQGLPVGLQIVGPRHSDDLVLAVAKLAEE 456 >gi|260790541|ref|XP_002590300.1| hypothetical protein BRAFLDRAFT_121360 [Branchiostoma floridae] gi|229275492|gb|EEN46311.1| hypothetical protein BRAFLDRAFT_121360 [Branchiostoma floridae] Length = 569 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 131/494 (26%), Positives = 222/494 (44%), Gaps = 76/494 (15%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRI-INGDARD 70 R S+ ++ E+ + I+AI++S+ + + A I+ ++ R A S +R N Sbjct: 127 RPSSETMTPTEVAERAIRAIQDSDRRKPPLRAIIQYNVEEIRKMAAASTERYRNNAPLSP 186 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G+P+ IK+ A + ++ + L P +STV KL + GAV+LG NM E M Sbjct: 187 LDGVPVCIKEELAVVPYYHRSGTDCLGCDAPSTVDSTVVAKLREAGAVILGVANMHELGM 246 Query: 130 GSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 G + N +G +P+ T SS GS++AV +C +IGTD GGS+R P Sbjct: 247 GVTGCNPNKLHGTARNPYNPQHFTGG-----SSSGSASAVGAGICPIAIGTDAGGSVRIP 301 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 ++ G VG+K G I +VRD+AI AG D +N Sbjct: 302 SALCGVVGLK---------------------GPIAASVRDAAIAFALTAGPDPKYPHGLN 340 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P+ D E + ++ G+ VG+ Y L + S I ++ I L++ GA IV++ +P Sbjct: 341 QPIIDLENLDNTNLTGIRVGVDWRY-LRHSSNCIVAACEKTIEHLENCGANIVDVQIPEL 399 Query: 308 QYALPAYYIISPAEASSNLARYDGVRY-GLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + A A+ I E ++ +A +Y L + + +L M + + + Q +K R Sbjct: 400 EEARIAHTCIVVMEMAAAMAESFSKQYDNLTLPSRGLLAMRDTVPAFDYIQAMKQR---- 455 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-------FPLGK- 418 RT+ +F + VDVI+TP T A GK Sbjct: 456 ------------------TRTM---NFLKEIFNKVDVIITPGTGVLAPRTNPGELTYGKA 494 Query: 419 -EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSV 476 ++ +S M +++ N+AG+PA++VP +P+ LQ+ ++E + V Sbjct: 495 PDQKDSALMRYMFLG------NLAGIPAVTVPIGYSSNNNLPMSLQVQAGWWQEGVMLRV 548 Query: 477 GQIIEKEAGYFRPH 490 +EK + +P Sbjct: 549 AHAVEKGTKHAKPQ 562 >gi|326411170|gb|ADZ68234.1| amidase [Brucella melitensis M28] gi|326554461|gb|ADZ89100.1| amidase [Brucella melitensis M5-90] Length = 462 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 135/493 (27%), Positives = 220/493 (44%), Gaps = 40/493 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++LP D + LD ++G+ +G+ +L D+ G +A A Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL-------WLDAGFDEPVGGGTRAAVEAAA 281 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFG 356 K+ A II P N DG+ R+ DI +M ++ Sbjct: 282 KLFA----------DAGAIIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQA---- 327 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ I T + YL ++ + R+ A + D I++PT P +P Sbjct: 328 -KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPMPTYPA 384 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + FTVA+NM+ PAI++ K +P+GLQ+ GQ F + + + Sbjct: 385 EWASPINDPQRPFEHIAFTVAMNMSEQPAIAINCGYTAKGLPIGLQIFGQRFDDLGVLRL 444 Query: 477 GQIIEKEAGYFRP 489 + E RP Sbjct: 445 AKAYEDMRPVQRP 457 >gi|238026507|ref|YP_002910738.1| amidase [Burkholderia glumae BGR1] gi|237875701|gb|ACR28034.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase [Burkholderia glumae BGR1] Length = 458 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 113/416 (27%), Positives = 179/416 (43%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S L P +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDIAGQVTRAGSRALADAPPAAADAPAVARLRRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R + D GGSS G++ +VA + AA++GTDTGGS+R PA+ Sbjct: 134 SGLGLNPHYGTPRSPYRRAVAGDARVAGGSSSGAAVSVADGMAAAALGTDTGGSLRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG Sbjct: 194 LCGLTGFKPTASRVPKDGGVPLSSTLDSFGPIGVSVACCALVDRILAGLAPR-------- 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 VP + ++G+ +G+ Y D + + + + L AGA + ++ Sbjct: 246 VPAM-----RPLEGVRLGVLDHYVTDGMDAEVTAAFSAALERLAAAGAILSDLRF----- 295 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P E ++ R+ + +LE +T + V RIM G Sbjct: 296 --------APLERLDDINRFGFSPIEAYAWHRPLLERRRDT----YDPRVLARIMKGQPA 343 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + VD +L PT P L + E + + Sbjct: 344 TA-----ADYLDLLAARAAMLDEAERTLWPSVDAVLAPTVPVVPPRLAELERDDDAFART 398 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 + A N A+SVP C ++ P+GL + P R++TL ++GQ IE Sbjct: 399 NALILRNPSAFNFLDACALSVP---CHQRDGAPVGLMIAAAPHRDDTLLAIGQSIE 451 >gi|297180316|gb|ADI16534.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit and related amidases [uncultured bacterium HF4000_009C18] Length = 440 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 131/477 (27%), Positives = 222/477 (46%), Gaps = 52/477 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L AV E L+ +I++ ELV SYI+ I+ ++ A+ + A++ D Sbjct: 1 MSSLKLSAV-EMVQSLKKGEITSEELVKSYIEQIKKKEKEVEAWEFFDQELVLNQAKKLD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +G DL GIP+GIKD F T+ + T + I + TV KL GA+++G Sbjct: 60 ELHQSGKHGDLHGIPVGIKDIFDTENMPTTDGTEIHKKNPSWNDCTVVSKLRQAGAIIMG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTD 179 K E A YY SP ++ + D TPGGSS GS+AAVA + ++G+ Sbjct: 120 KTVTAELA--------YY----SPGKTKNPHDPTRTPGGSSSGSAAAVASHMVPLAVGSQ 167 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ +PAS+ G VG KP+ G SR ++ + +LDQ G+ ++ D+A++ + + GYD Sbjct: 168 TNGSVIRPASYCGVVGYKPSKGYISRHLVLQVSRALDQVGVFANSIEDAALISEQLIGYD 227 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAK 298 + D P P A Q I +L ++S +++ ++G +KD K Sbjct: 228 KQDPDTSLNPKPKLLAASKQKPPAEP--ILAYIKLPFMS-ELEEDAKEGFEEIKDELKGK 284 Query: 299 IVEISLPHTQYALPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + E+ LP +P ++ II ++ + + ++ Y+N+++ Sbjct: 285 VDEMELPEGFANIPKWHKIIMESDMAQSFSKE-----------------YKNSKN-KLSD 326 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++ I G + D+ KI + + F D ILTP+ A P G Sbjct: 327 KIIEAIERGMRYTALEYKDA----LSKID--VANVYFNQFFHDYDAILTPSANGEA-PKG 379 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + N +F+ G+P+IS+P + +P+G+QL+ + +E LF Sbjct: 380 --------LKSTGNPIFSTIWTYCGMPSISLPLLQGKNGLPIGVQLVSSLYDDERLF 428 >gi|167839515|ref|ZP_02466199.1| amidase [Burkholderia thailandensis MSMB43] Length = 484 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 137/479 (28%), Positives = 212/479 (44%), Gaps = 40/479 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ I N +NA + + A A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLTHIGRVNGDVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPTADAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 138 FNEVYGVTRNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPLR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++L+ ++G + ++ YL+ P + + + L+ G + A Sbjct: 253 FAQSLEADLRGKRIAWVGDWN-GYLAMEPGVLELCEASFDALRAIGCDV--------DAA 303 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY-ENTRSIGFGQEVKHRIMIGTYV 369 LPA+ SP + + + G ++L +Y E +R E + G + Sbjct: 304 LPAF---SPERIWQTWLAHRHL-----LSGGNLLTLYREPSRRTQLKPEAIYEAE-GLFA 354 Query: 370 L-SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--LGKEENNSGSM 426 L ++ YD+ R+ R L T FE+ D I PT F L + +G Sbjct: 355 LGAADIYDASAARSAWYRAL-----TTFFER-YDYIAAPTAQVFPFDVHLRWPQAIAGRA 408 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG PAISVP +P+G+QLIG+P + + + EKE Sbjct: 409 MDTYHRWMETVVPWTLAGCPAISVPVGFGAAGLPMGMQLIGRPRDDLAVLQLAHAYEKE 467 >gi|294085577|ref|YP_003552337.1| glutamyl/aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Candidatus Puniceispirillum marinum IMCC1322] gi|292665152|gb|ADE40253.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Candidatus Puniceispirillum marinum IMCC1322] Length = 460 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 131/473 (27%), Positives = 216/473 (45%), Gaps = 58/473 (12%) Query: 21 ISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++A + +++ + AI++ N Q N +IE +ARA A+ D NG A G+ + I Sbjct: 29 LNARDHIENCLAAIDDKNGQGQNTFIETYHDRARAEADAVDTARKNGWALPPFAGVSLSI 88 Query: 79 KDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD F G T+A S +L P ++T+ +L G +++G+ NM EFA + Sbjct: 89 KDLFDVAGDVTKAGSILLADSPPAKKDATIVARLRQAGFILIGRTNMTEFAFSGLGMNVH 148 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG +SP+ D GGSS GS+ +V+ + A SIG+DTGGS R PAS+ G VG+K Sbjct: 149 YGNPLSPY---DRKTGRVAGGSSSGSAVSVSDNMAAISIGSDTGGSTRAPASYCGIVGLK 205 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P+ R G+ +PS D AG + +V +I+ +AG T N PD Sbjct: 206 PSTARMPSDGVFPLSPSFDAAGPMGNSVACVSIIDSIMAGGVGVSETPFN---PD----- 257 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 G+ + IP Y ++ L + + I L+DAG + +I L + P+ Sbjct: 258 -----GLRLAIPDGYLMENLDAEVATAFDAAIDRLRDAGVHVQKIRLDALEAMRPSNNTK 312 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 S A + Y + + E+ +S + + HR+ G +L+ + Sbjct: 313 SIVSAEA---------YAVH------RQWLESDQSDKYDPFIGHRLRGGADILA-----A 352 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-----TSAFPLGKE--ENNSGSMGHIY 430 Y+ + R + + + +G D ++ PTTP +A P + E N+ S+ + Sbjct: 353 DYIAMFEKRDTVCHNI-KMQTRGFDALVLPTTPGIAPAINAMPTRDKQLEMNARSLRN-- 409 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 T N P IS+P C K P+GL L+G + L ++ + +E Sbjct: 410 ----TAISNYLDRPTISIP---CHKSGTAPVGLSLMGSRHHDRRLLAIAEGLE 455 >gi|167045719|gb|ABZ10366.1| putative amidase [uncultured marine bacterium HF4000_APKG2098] Length = 440 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 215/481 (44%), Gaps = 60/481 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L AV E L+ +I++ ELV SYI+ I+ ++ A+ + A++ D Sbjct: 1 MSSLKLSAV-EMVQSLKKGEITSEELVKSYIEQIKKKEKEVEAWEFFDQELVLKQAKKLD 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +G DL GIP+GIKD F T+ + T + I + TV KL GA+++G Sbjct: 60 ELHQSGKHGDLHGIPVGIKDIFDTEDMPTTDGTEIHKKNPSWNDCTVVSKLKQAGAIIMG 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTD 179 K E A YY SP ++ + D TPGGSS GS+AAVA + ++G+ Sbjct: 120 KTVTAELA--------YY----SPGKTKNPHDTTRTPGGSSSGSAAAVASHMVPLAVGSQ 167 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ +PAS+ G VG KPT G SR ++ + +LDQ G+ ++ D+A++ + + G+D Sbjct: 168 TNGSVIRPASYCGVVGYKPTKGLISRHLVLQISRALDQVGVFANSIEDAALISEQLIGHD 227 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAK 298 + D P P A + V +L +++ +++ ++G +KD K Sbjct: 228 KQDPDTSLNPRPKLLAASKEKPPAEPVLA--HIKLPFIN-ELEEDVKEGFKEIKDELKGK 284 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + EI LP +P ++ I S++AR F +E Sbjct: 285 VDEIELPEGFAGIPDWHKII---MESDMAR-------------------------SFSEE 316 Query: 359 VKH-RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSA 413 K + + ++ + Y L K D A F D ILTP+ Sbjct: 317 YKKSKNKLSDKIIEAIERGMKYTSVEYNNALAKIDVANAYFNQFFHDYDAILTPSA---- 372 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+ S G N +F G+P I++P + +P+G+QL+ F +E L Sbjct: 373 --CGEAPKGLKSTG---NPIFCTIWTYCGMPCINLPLLQGKNGLPVGVQLVSSLFDDERL 427 Query: 474 F 474 F Sbjct: 428 F 428 >gi|84515677|ref|ZP_01003038.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Loktanella vestfoldensis SKA53] gi|84510119|gb|EAQ06575.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Loktanella vestfoldensis SKA53] Length = 462 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 131/483 (27%), Positives = 208/483 (43%), Gaps = 63/483 (13%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESDKRIIN 65 + RDRL S + A +L + I+ ++ + + A+ V+ Q R A+ R + Sbjct: 22 DMRDRLASGAMRAADLAAACIEQVKRREADVQAWAWLDEQHVMTQAGRLDAQRKTGRPVG 81 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P+ +KD T GI T+ + I G P ++ + +KL GA ++GK Sbjct: 82 ----PLHGLPVALKDIIDTNGIPTENGTIIDKGRVPTEDAVIVRKLKAAGAYVMGKTVTT 137 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E A ++P ++ + + TPGGSS GS+AAV + +IGT TGGS+ Sbjct: 138 ELAY------------VAPGKTRNPVNPDHTPGGSSQGSAAAVGAAMVPLAIGTQTGGSV 185 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-A 243 +PA++ G VG KP++G R GI+S +PSLD G+ +V A+L + G D D A Sbjct: 186 IRPAAYCGVVGFKPSFGMIPRTGILSQSPSLDTVGVFATSVAGVAMLADVLCGDDPADHA 245 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAKIVEI 302 T ++ P AL T+ + D +P+ D + L D G + + Sbjct: 246 TTLSAPPRLLATALSDVPVRPTLALMAHMPGDT-APSEDMAL--AMQELSDILGEDVFAL 302 Query: 303 SLPHTQYALPAYYIISPAEASS--NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 +LP AE N A Y G+ L +I G+ V Sbjct: 303 TLP--------ILFDEAAEIRERINFAEMAKCYYAYERRGRQQLSDI-TLAAIDAGKTVL 353 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R YL A L+ E F + D I+ P TPTSA P G Sbjct: 354 AR---------------DYLAALDWPKLLNAALDEIFAR-CDAIICPATPTSA-PAGLSS 396 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 S +YN ++T + G+P +++P +P+GLQ++G+ + L + + Sbjct: 397 TGSA----VYNGLWT----LCGVPVVTLPLFEDSTGLPMGLQVVGRRGNDARLLRTARWL 448 Query: 481 EKE 483 E Sbjct: 449 TSE 451 >gi|304310490|ref|YP_003810088.1| amidase [gamma proteobacterium HdN1] gi|301796223|emb|CBL44431.1| amidase [gamma proteobacterium HdN1] Length = 490 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 137/541 (25%), Positives = 218/541 (40%), Gaps = 109/541 (20%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++ + + ++ ++S+ +L++ I +E N +NA + AR A+E+D Sbjct: 3 TDWEYQTAKQQLQAIQKGEVSSRDLLEHCIARVERLNPALNAVVATDYVAARQRADEADA 62 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G++ L G+P+ IKD + G+ A + I +RP + L GA++ G Sbjct: 63 ARNRGESLGPLHGLPMTIKDTWEVPGMPCTAGAGIFRDYRPKKPAVAVNALESAGAIVFG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ FA + YG +PW K TPGGSSGG++AA+A A +G+D Sbjct: 123 KTNVPVFASDLQSFNKIYGTTRNPWDV-----KRTPGGSSGGAAAALAAGFTALELGSDI 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP------SLDQAGIITRTVRDSAILLKA 234 GGSIR PA F G G KPT+G S G I P L G + R+ D + + Sbjct: 178 GGSIRIPAHFCGVYGHKPTHGIVSLRGHIPGPPGTMGEGDLVVGGPLARSAEDLQLAMDV 237 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 IAG NL +P A + +Q V + W+ D Sbjct: 238 IAGDVPLVQPGWNLKLP---AAKQKKLQDFRV----------------------LLWVDD 272 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNL-ARYDGVRYGLRVE----------GKDI 343 A + +NL A+Y + LR G D+ Sbjct: 273 AACPL-----------------------DTNLVAQYGKLERALRESGVSVDKSNPLGMDL 309 Query: 344 LEMYEN-----------------TRSIGFGQEVKHRIMIGTYVLSSRCYD--------SH 378 ++Y R +G + HR +G ++ + R +D SH Sbjct: 310 DQLYPTYLNLLGSVMGVSRKKFERRLMGLAAPLLHR--LGQHLDAPRHFDQFLAGAGQSH 367 Query: 379 --YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--------FPLGKEENNSGSMGH 428 +LR + R ++ F FEQ DVIL P T+A PL K E N + Sbjct: 368 ADWLRFDERRNRLREKFKRVFEQ-YDVILMPPALTTAIPHNQERELPLRKIEINGARRNY 426 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 ++ + GLPA S P + + +P +Q++G P++++T ++ K G F Sbjct: 427 ADLLMWISPATLMGLPATSAPVGITDSGLPCNIQIVGAPYQDKTTIKFASLLAKVIGGFT 486 Query: 489 P 489 P Sbjct: 487 P 487 >gi|91780790|ref|YP_555997.1| putative amidase [Burkholderia xenovorans LB400] gi|91693450|gb|ABE36647.1| Putative amidase [Burkholderia xenovorans LB400] Length = 471 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 139/506 (27%), Positives = 222/506 (43%), Gaps = 67/506 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + EL + E R L S ++ Y+Q I+N N +NA + V R A E+S Sbjct: 5 IPELVALGAVELRSGLVSGRFGWQDVALQYLQHIDNVNPHLNALVRV----ERDAWEQSL 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + L G+P+ +KD G T S + F ++ +L NGAV++G Sbjct: 61 NRF----EQPLGGVPVSVKDNIWVGGRRTSNGSRLFSDFIAPEDALCVARLRGNGAVLIG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 N EFA + YG P +D+ + TPGGSSGG++AAVA LCA +I TD Sbjct: 117 SSNCSEFACKGNTTNILYGATRHP---LDA--QRTPGGSSGGAAAAVAAGLCAVAIATDA 171 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL-------DQAGIITRTVRDSAILLK 233 GGS+R+PA+ TG VG KPT G+I+ P + GI+ R+V D ++ + Sbjct: 172 GGSVRRPAAHTGVVGFKPTA------GVIAHGPGFAEPVYGNNTIGILARSVGDVRLVFE 225 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWL 292 + G+ D V+ D + Q + + L + + P I + + + L Sbjct: 226 QLHGHQPRDPASVS----SAMLGRDGTGQRLKIAFSPRLGLGFAVDPGIAQAVEHAVRLL 281 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 DAG + +Y P ++ N+ D + L + + N R Sbjct: 282 ADAGHAV--------EYRDPPWF--------ENVQEADLMPLQLAGLATIYADAFRNNRE 325 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 F ++ +I G + + RA ++R + F++ VD +LTPT P Sbjct: 326 -SFDPDIAAQIDAGLSLPAVAVT-----RALELRKRLFAAMCSLFDR-VDCLLTPTAPCV 378 Query: 413 AFPLGKEENNSGS------MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 A+ + ENN+ +G + VFT N +PA SVP L E +P GLQ++G Sbjct: 379 AW---RIENNAPQRIEGKPVGPRDHAVFTPLFNHTYVPACSVPCGLAEHGLPAGLQIVGP 435 Query: 467 PFREETLFSVGQIIEKEAGYFRPHKW 492 + + + + +E+ G H+W Sbjct: 436 MYSDRMVLGLSAEVERLLG----HRW 457 >gi|167572711|ref|ZP_02365585.1| amidase [Burkholderia oklahomensis C6786] Length = 476 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 134/478 (28%), Positives = 208/478 (43%), Gaps = 38/478 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N +NA + + A A A + D + G+ A L G Sbjct: 10 IRRKDVSCVETMRAYLAHIERVNGDVNAIVALREPDALLAEAAQKDAALARGEYAGWLHG 69 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP KD TK I T S I RP ++ V +++ GAV +GK N F +GS Sbjct: 70 IPQAPKDLAMTKDIVTTLGSPIFRTMRPSADALVVERMRAAGAVFVGKTNTPAFGLGSHT 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 130 FNEVYGATHNPYDLSKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAFCNV 184 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R + F L G + RTV D A+LL AGYD D + Sbjct: 185 YGFRPSQGRVPRWPSVDVFVQQLGTEGPMGRTVVDVALLLAIQAGYDRRDPLSLAEDPQR 244 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + ++LD ++G + ++ YL+ P + + L+ G + A Sbjct: 245 FAQSLDADLRGKRIAWVGDWN-GYLAMEPGVLALCEASFDALRAIGCDV--------DAA 295 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 LP++ SP + + + G ++L Y + Q + G + L Sbjct: 296 LPSF---SPERIWQTWLVHRHL-----LSGGNLLMHYRDPSRRALLQPEAIYEVEGLFKL 347 Query: 371 -SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSMG 427 +S YD+ R+ L T FE+ D I PT F +G + +G Sbjct: 348 GASDVYDASAARSAWYHAL-----TTFFER-YDYIAAPTAQVFPFDVGLRWPQAIAGRTM 401 Query: 428 HIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y+ V +AG P ISVP +P+G+QLIG+P + + + + E E Sbjct: 402 DTYHRWMETVVPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRDDFAVLQLARAYEME 459 >gi|119510007|ref|ZP_01629148.1| Amidase [Nodularia spumigena CCY9414] gi|119465331|gb|EAW46227.1| Amidase [Nodularia spumigena CCY9414] Length = 467 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 137/489 (28%), Positives = 217/489 (44%), Gaps = 52/489 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESDK 61 +L F E D +R +++S +ELVD Y++ I N Q+ +Y V A+ A A A+ +++ Sbjct: 5 DLAFTPAVELADLIRRREVSPLELVDLYLERISQFNPQLGSYFTVTAELAIADAKVKTET 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+PI IKD GI + L P+Y+ V ++ G ++LGK Sbjct: 65 LATTSELPPFFGVPISIKDLNPVAGIPCTYGNPALLQNIPNYDDGVVTRIKQAGFIILGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E E + + P +PW ++TPGGSSGG++AAVA LCA + G+D G Sbjct: 125 TATSELGSFPYTEPTGFTPARNPWNL-----EYTPGGSSGGAAAAVAAGLCAVAQGSDGG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PA+ G VGIKP+ GR + + + + G I RTV D+A LL ++GY Sbjct: 180 GSVRGPAACCGLVGIKPSRGRVTNAPVGNQLAGIATNGPIGRTVADAAALLDVMSGYVTG 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG----ISWLKDAGA 297 D + P P + A + + + + + L D QQG + L + G Sbjct: 240 DPCWLPNPEPSFLAATTEKLGNLRIAF--STNIPPLG-EADANCQQGVLQTVKLLAEMGN 296 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE--MYENTRSIGF 355 I E P + + I+ ++ G+ +E + ++ T S+G Sbjct: 297 TIAE-KCPDFSALIEPFQIVWQGGVAA---------AGIPIEALQPVNRLLFSRTGSVG- 345 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 YLRA ++ R AF VDV++ P S Sbjct: 346 ----------------------EYLRAVSQMQIVARQIV-AFFDTVDVLVLPVYLHSPIR 382 Query: 416 LGKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 +G+ + S + I + V A N G PAI++P +P+ +QLIG+P E T Sbjct: 383 VGEWADLSPEETFQKIVHWVAPCPASNATGQPAIALPVGFDSNGLPMSVQLIGKPAAEAT 442 Query: 473 LFSVGQIIE 481 L S+ +E Sbjct: 443 LISLAAQLE 451 >gi|318058320|ref|ZP_07977043.1| Amidase [Streptomyces sp. SA3_actG] Length = 497 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 129/500 (25%), Positives = 219/500 (43%), Gaps = 48/500 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E +R +++S VE+VD+ + +E + +++A+ ++ARA+A R+ Sbjct: 9 LCALPATELSAFVRGREVSPVEVVDAVLARMEATEPRLHAFCTPAPERARASARALADRL 68 Query: 64 I-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G A L G+P+G+KD +T+G+ T + S F P + V +++ AV+LGK Sbjct: 69 ARGGTAGPLAGVPLGVKDLLSTRGLRTTSGSVAYRDFVPDEDDIVVERVRAADAVVLGKT 128 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N EF ++ + +PW + + TPGGSS GS+AAVA ++G+D GG Sbjct: 129 NTSEFGYSATGRNPLFETTRNPWDT-----RLTPGGSSAGSAAAVAAGAGPLALGSDGGG 183 Query: 183 SIRQPASFTGTVGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+R PA+ G VG K + GR RL +S SL G + RTV D + L Sbjct: 184 SVRVPAALCGLVGFKASMGRVPVYPGCRDERLPGVSGWESLKHIGPLARTVADIGLALSV 243 Query: 235 IAGYDECDATCVNLPVPDYE----RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +AG D D + D+ R + I G+ + + + P + + S Sbjct: 244 LAGPDPRDRHSIPCGDVDWRGAVGRGAGEGIAGLRIAYSPDLGYLAVDPEVRRVVDAAAS 303 Query: 291 WLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 DA G ++ + P + P +A + L D D+ M Sbjct: 304 VFADALGCEVERVE--------PGWA--DPGDAFAALIMAD----------TDLRGMRAL 343 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 G R M+ + D+ +R + + + D++LTPT+ Sbjct: 344 VAEHGEAMSPHLRAMLARAWTAEEFTDAEMVRKGVVNRMAR------LMARYDLLLTPTS 397 Query: 410 PTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 AFP+G E + + + F V N+ G PA+S+PA +P+GLQL+G+ Sbjct: 398 CVPAFPVGIEGPATIAGRPVPPTTWTGFCVPANLTGQPALSLPAGRTGAGLPVGLQLVGR 457 Query: 467 PFREETLFSVGQIIEKEAGY 486 + T+ E+ + + Sbjct: 458 HLADATVLRAAAAFEQASPW 477 >gi|323143620|ref|ZP_08078297.1| Amidase [Succinatimonas hippei YIT 12066] gi|322416683|gb|EFY07340.1| Amidase [Succinatimonas hippei YIT 12066] Length = 518 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 109/312 (34%), Positives = 159/312 (50%), Gaps = 24/312 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRI 63 +++ + R L +K I++ +L+ +Y++ IE ++ + +NA I + A A A D Sbjct: 29 LSLPQMRVALDNKQITSEQLITAYLKNIEKNDKKGKKINAVI-YINPDALAQARIFDANN 87 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 NG L GIP +KD T GI T + L P + V QKL D GA++LGK N Sbjct: 88 -NGKNLPLAGIPFLVKDNINTAGIATTGGTLPLKNSTPQANAFVVQKLIDQGAIVLGKTN 146 Query: 124 MDEFAM--GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + E A G +S G ++P+ +K GSS GS+AAVA ++GTDT Sbjct: 147 LSELAASYGRLGYSSLGGQTLNPFN-----EKRDASGSSSGSAAAVAMSFAPFALGTDTS 201 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PAS T TVG++P+ G R G+I + S D G+ITR V D AI+L I D Sbjct: 202 GSIRGPASTTATVGLRPSLGLTGRSGVIPLSLSADTVGVITRDVTDQAIVLDVINAVDLN 261 Query: 242 DATCVNLPVPDYERAL-------DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 DA +NL ++ R + S+ G +GI + D + +DK + +K+ Sbjct: 262 DAATLNL---NHLRNIFYKAVTGPVSLVGKRIGIISNF--DGGNSDVDKVRDHAAALIKN 316 Query: 295 AGAKIVEISLPH 306 GA I EI LP Sbjct: 317 HGAIIEEIKLPE 328 >gi|27376155|ref|NP_767684.1| allophanate hydrolase [Bradyrhizobium japonicum USDA 110] gi|27349294|dbj|BAC46309.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA 110] Length = 602 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 120/471 (25%), Positives = 210/471 (44%), Gaps = 43/471 (9%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LEGI 74 R+ ++ + + Q I + N + + + + + A E++K DA L G+ Sbjct: 17 RAGTLTPAQTIARSYQRIRDHN---DPAVFISLRDEKDAIAEAEKLAARPDAASMPLYGV 73 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD G T A + P ++ST ++L GA+++GK N+D+FA G Sbjct: 74 PVAVKDNIDALGFPTTAACPAFS-YTPTHDSTAVERLRAAGAIIIGKTNLDQFATGLVGV 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S YG P S+ + PGGSS GS+ A+ L ++GTDT GS R PA V Sbjct: 133 RSPYG---IPKNSI--REDLIPGGSSSGSATALGAGLVPLTLGTDTAGSGRVPAMLNNIV 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KP+ G S G++ +LD + TV D+A+ L +AG D+ D + P+ Sbjct: 188 GLKPSLGMISTAGLVPACRTLDCISVFALTVDDAALALSVMAGPDQADPFSRDRPL---- 243 Query: 255 RALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL-PHTQYALP 312 AL + +G+P+ +L + + + + + GA +VE L P + A Sbjct: 244 GALTPFPANLRLGVPRNGQLIFFGDKKAEAAYGEALKRWTALGATLVEFDLEPFYETARL 303 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 Y E RY ++ L D++ + TR I G + ++ Sbjct: 304 LY------EGPWVAERYLVIK-NLLASAPDMI--HPVTREI---------TAAGARLTAA 345 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 + + Y R + +R + +R F +D ++ PT PT A+ + N + Sbjct: 346 DTFSALY-RLQGLRKIAERTFAN-----IDALVLPTAPT-AYTTAQVLANPIELNSRLG- 397 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +T VN+ L ++VPA++ +P G+ L+ R+ L S+G++ + Sbjct: 398 TYTNFVNLLDLCGLAVPASMRADGIPFGITLLAPAGRDALLASIGRVFHAD 448 >gi|324999693|ref|ZP_08120805.1| putative amidase [Pseudonocardia sp. P1] Length = 462 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 136/492 (27%), Positives = 211/492 (42%), Gaps = 46/492 (9%) Query: 1 MSELNF-MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES 59 MSE ++ +E R+ ++S V+ + IE + +NAY V A A A A+ES Sbjct: 1 MSETTADLSATELLAAYRTGEVSPVQATRDALDRIEAHDGAVNAYCLVDADSALARAKES 60 Query: 60 DKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAV 117 + R G+ L+G+P IKD T G T+ S P + ++ GAV Sbjct: 61 EARWQAGEPIGPLDGVPTSIKDMLLTIGWPTRRGSTTTSPDGPFEVDGPPVARVRAAGAV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK E A ++ G +PW D+T T GGSSGGS++AV + S+G Sbjct: 121 LLGKNTTPELAWKGVTDSPLTGVTTNPW---DATR--TAGGSSGGSASAVGLGMGPLSLG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TD GGS+R PA+FTGTV KPTYGR + +F +L G +TRTV D+A+L +A Sbjct: 176 TDAGGSVRIPAAFTGTVAHKPTYGRIAHYPGSAFG-TLAHVGPMTRTVADAALLHDVVAQ 234 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++P L QG+ + + P + ++ A Sbjct: 235 PDTRDPWVFDVPRESAVERLAGGAQGLRIAFSPTLGFVDVDPEVAALVADAVAVFSRALG 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 VE + P + ++ + A A+ +L + E + ++ Sbjct: 295 ATVEHADPGFADPIEPFHTLWFAAAAKSLEP-------IGAEARTAMD------------ 335 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++G R YL A +R + AF D++LTPT P +AF G Sbjct: 336 ----PALVGIAEQGERVSALDYLGAMAVRNELGT-LMGAFHDSYDLLLTPTLPITAFEGG 390 Query: 418 KEENNSGSMGHIYND-------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 +E ++D FT NM PA SVP +P+GLQ++G + Sbjct: 391 REVPEG------WHDPRWTSWTPFTYPFNMTQQPATSVPCGFTSAGLPVGLQVVGPRHAD 444 Query: 471 ETLFSVGQIIEK 482 T+ + ++ Sbjct: 445 ATVLAAAHAYQQ 456 >gi|33599684|ref|NP_887244.1| amidase [Bordetella bronchiseptica RB50] gi|33567281|emb|CAE31194.1| probable amidase [Bordetella bronchiseptica RB50] Length = 424 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 122/243 (50%), Gaps = 24/243 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVA----QKARA-A 55 M L+ + + E+R+RL + +V+LV + + I Q+ A+ V A +KARA A Sbjct: 1 MQPLHLLGLHEARERLMAGACDSVDLVQACLDRIAAREEQIRAWAWVDAAGALRKARAMA 60 Query: 56 AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 D R R L G+PI +KD T + T S I G RP + + + G Sbjct: 61 GARPDPR------RPLAGLPIAVKDIIDTADMPTAYGSPIYAGHRPAWSAYCVAAIEAAG 114 Query: 116 AVMLGKLNMDEFAMGSSNET-SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 ++LGK EFA + T + + P + TPGGSSGGS+A VA F+ A Sbjct: 115 GIILGKTATSEFAHSAPPATRNPHAP------------QHTPGGSSGGSAACVADFMAPA 162 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 ++ T TGGS +PA+F G VG KP+ G R G+ A SLD G++ R V D +L Sbjct: 163 ALATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAVADIQLLAGV 222 Query: 235 IAG 237 +AG Sbjct: 223 LAG 225 >gi|53715909|ref|YP_106573.1| amidase [Burkholderia mallei ATCC 23344] gi|67640392|ref|ZP_00439200.1| peptide amidase [Burkholderia mallei GB8 horse 4] gi|121596770|ref|YP_990686.1| amidase [Burkholderia mallei SAVP1] gi|124382163|ref|YP_001025171.1| amidase [Burkholderia mallei NCTC 10229] gi|126446400|ref|YP_001079523.1| amidase [Burkholderia mallei NCTC 10247] gi|167003675|ref|ZP_02269460.1| peptide amidase [Burkholderia mallei PRL-20] gi|254176569|ref|ZP_04883227.1| amidase family protein [Burkholderia mallei ATCC 10399] gi|254203588|ref|ZP_04909949.1| peptide amidase (Pam) [Burkholderia mallei FMH] gi|254205457|ref|ZP_04911810.1| peptide amidase (Pam) [Burkholderia mallei JHU] gi|52421879|gb|AAU45449.1| amidase family protein [Burkholderia mallei ATCC 23344] gi|121224568|gb|ABM48099.1| amidase family protein [Burkholderia mallei SAVP1] gi|126239254|gb|ABO02366.1| peptide amidase [Burkholderia mallei NCTC 10247] gi|147745827|gb|EDK52906.1| peptide amidase (Pam) [Burkholderia mallei FMH] gi|147755043|gb|EDK62107.1| peptide amidase (Pam) [Burkholderia mallei JHU] gi|160697611|gb|EDP87581.1| amidase family protein [Burkholderia mallei ATCC 10399] gi|238521096|gb|EEP84550.1| peptide amidase [Burkholderia mallei GB8 horse 4] gi|243060814|gb|EES43000.1| peptide amidase [Burkholderia mallei PRL-20] gi|261826680|gb|ABN00425.2| peptide amidase [Burkholderia mallei NCTC 10229] Length = 528 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 150/488 (30%), Positives = 230/488 (47%), Gaps = 64/488 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFAT-KGIH 88 I I+ ++NA IE+ A A A D G AR L G+ + +KD AT + Sbjct: 61 IARIDRDGPRLNAIIEL-NPDAEAIAHALDAERAAGVARGPLHGVTVALKDNIATGDRMS 119 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 120 TTAGSLALDGVRATRDAHLVARLRRAGAVIVAKANLSEWANFRSTRSTSGWSARGGLSRN 179 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+AAVA L A S+GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 180 PYALDR-TTSGSSSGSAAAVAAGLVAVSVGTETDGSIVSPAAINGCVGLKPTLGRVSRDG 238 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTVRD+A LL A+AG D D AT DY ALD +++G Sbjct: 239 IVPVSHTQDTAGPIARTVRDAARLLGALAGGDARDSATASAPAPADYVAALDANALRGAR 298 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 299 LGIARAYFTGH--DEVDVQIERAIAEMKRLGAVVIDPVDLPKADYEEDEKVVLLHEFKHG 356 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP++ +P LA D + + R +++ FGQE Sbjct: 357 LPSWLRTFAPHARVRTLA--DVIAFNARQHAREMPY---------FGQE----------- 394 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEE 420 L ++ L A R + R A ++G +D ++ PT +A+ + Sbjct: 395 LLLHAQEAGGLDAAAYRDALARCGRRARDEGLARVLREHRLDALVAPTE-GNAWLIDLIN 453 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 +SG D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G Sbjct: 454 GDSG------GDGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAF 506 Query: 481 EKEAGYFR 488 E+ + R Sbjct: 507 EQATQWRR 514 >gi|6521703|dbj|BAA88067.1| indole acetamide hydrolase [Variovorax paradoxus] Length = 464 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 127/489 (25%), Positives = 210/489 (42%), Gaps = 65/489 (13%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V+ R+ L S S VE + I A + + +N Y++ A A ++D I G + Sbjct: 8 VASLRNALLSGATSCVEHATALI-ARTQALAHLNGYVDFDPVPFLAQARQADVDIARGVS 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ +KD T G T + L G P ++ + ++L +GA++ GK M Sbjct: 67 APLLGVPLALKDNINTTGFPTGVGTRTLRGRIPAADAEIVKRLKQSGAIISGKAGMHR-- 124 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV-AGFLCAASIGTDTGGSIRQP 187 S+ P S +T P + G SSA V A L +IGTDTG S+R P Sbjct: 125 -------SW------PSASPATTGSLVPSATPGHSSAVVVAAGLVPGAIGTDTGASVRLP 171 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+ G G++PT GR GI + + D AG + R++ D A+L A+ G D V+ Sbjct: 172 AALCGIAGLRPTVGRVPGTGIAPISSTRDTAGPMARSIADLALLDTALTG-DAAGLAKVD 230 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 L +G+ +GIP + L ++ L+ AG VE+ LP Sbjct: 231 L-------------RGLRLGIPNDRFWTPLDASVAAVMDDTRKELQRAGVDFVELDLPGL 277 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-----GFGQ-EVKH 361 +A +N + + E D L+ + I G G +V Sbjct: 278 -------------DALNNSVGFPVGLFEFMAEMPDYLKASGHPLDIEALLAGIGSPDVAG 324 Query: 362 --RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R ++G+ + Y + ++++ L +R F + V + PT+ +A PLG + Sbjct: 325 ILRPLLGSGAIPEPVYRAALADRQRLQELYRRTFA---QHQVRALAFPTSALTARPLGTD 381 Query: 420 EN-------NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + M +I N T + AG+P +S+PA + +P+GL+L G + Sbjct: 382 DTVEFLGQRCPAFMIYIRN---TDPGSNAGIPGLSLPAGIGPDGLPVGLELDGPAGSDRD 438 Query: 473 LFSVGQIIE 481 L ++G +E Sbjct: 439 LLAIGAALE 447 >gi|167584396|ref|ZP_02376784.1| Amidase [Burkholderia ubonensis Bu] Length = 494 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 132/482 (27%), Positives = 207/482 (42%), Gaps = 40/482 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA-AEESDKRIINGDARD-LEG 73 +R KD+S VE +++Y+ I N +NA + + + A A A + D + G+ L G Sbjct: 31 IRRKDVSCVETMNAYLDHIARVNGALNAIVALRDRDALVAEAAQKDAALARGEHHGWLHG 90 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP KD TKGI T S I P +S ++ GA+ +GK N EF +GS Sbjct: 91 IPQAPKDIAMTKGIATTFGSPIFRNHVPQADSVGVARMRAAGAIFIGKTNTPEFGLGSHT 150 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ K G S G ++A A L A G+D GGS+R PA+F Sbjct: 151 FNDVYGATRNPY----DLTKSAGGSSGGAAAALAARMLPVAD-GSDFGGSLRNPAAFCNI 205 Query: 194 VGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R G+ F L G + RTV D A LL AGYD D + Sbjct: 206 YGFRPSQGRVPRWPGVDVFVQQLGTEGPMGRTVGDVANLLAIQAGYDPHDPLSLAEDPAV 265 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + + LD ++G V ++ YL+ P + + G++ L++ G + A Sbjct: 266 FAQPLDADLRGKRVAWVGDWN-GYLATEPGVLAQCETGLATLREIGCDV--------DAA 316 Query: 311 LPAYYIISPAEASSNLAR-YDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGTY 368 LPA+ A L R + R+ L G +L Y + R E + + Sbjct: 317 LPAF-------APERLWRIWLAHRHFL--SGGGLLAHYRDPARRALLKPEAIYEVEGLLA 367 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSM 426 + + +D+ R +TL+ F + D I P F + + +G Sbjct: 368 LPAQAIFDASVERTAWHQTLL------GFFERYDFIAAPAAQVFPFDMDARWPQQIAGRA 421 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 Y+ + +AG P ISVP +P+G+QLIG+P + + + + E+ A Sbjct: 422 MDTYHRWMETVMPWTLAGCPVISVPVGFNAAGLPMGMQLIGRPRADLAVLQLARGYEQAA 481 Query: 485 GY 486 + Sbjct: 482 DW 483 >gi|85858294|ref|YP_460496.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Syntrophus aciditrophicus SB] gi|85721385|gb|ABC76328.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Syntrophus aciditrophicus SB] Length = 453 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/412 (26%), Positives = 175/412 (42%), Gaps = 42/412 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ I+ CF T A S L GF ++TV ++L GAV+ G M EF G Sbjct: 74 LRGLKTAIQPCFCVAEWPTDAGSRALAGFTALEDATVVERLRQAGAVLTGLTRMSEFGFG 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + + A+ + D G R A+ Sbjct: 134 LDDSRA---------------------------GMAIRNQAADVELSLDLMGETRLAAAR 166 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KP++G SR G+I PS++ G+++ V+ +LK IAG DE D + + Sbjct: 167 ASVCGFKPSWGIVSRFGLIGLMPSMECCGLLSGGVKQIREVLKVIAGPDERDFSLPDEKT 226 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 PD+ + + + + T+G+ E + S D ++ ++ L++AG + EISLP Sbjct: 227 PDFSQG-EINPRETTIGVVPEGLSNMTSEQRD-AFEAALAELREAGFSLREISLPDFSLF 284 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + I+ EASS+ RYD VRYG R +G K+ EMY +R FG VK + G + Sbjct: 285 ALVHRIVGSVEASSSAGRYDSVRYGQRAKGAKNWNEMYLLSRGAAFGTLVKSYLFQGAFF 344 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 R YD+ Y A ++R + E Q + L P + + S+ Sbjct: 345 QFER-YDA-YEDACRVRARLLAAMAEISAQADFLALPAVNPGV-------PDMAASLDDT 395 Query: 430 YNDVF-TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 Y F T N+ G P + +P + GLQL G + L ++G+ + Sbjct: 396 YRQFFYTAFANVTGQPTLYLPPG--AGAITPGLQLAGPRLGDARLLALGEYL 445 >gi|258650288|ref|YP_003199444.1| amidase [Nakamurella multipartita DSM 44233] gi|258553513|gb|ACV76455.1| Amidase [Nakamurella multipartita DSM 44233] Length = 447 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 141/479 (29%), Positives = 215/479 (44%), Gaps = 48/479 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 RS ++S E VD + + S ++N I + A +ARA A G R L GI Sbjct: 11 FRSGELSPTEHVDDVLARL--SGDRLNTVITLNADRARAQASRLADEAAQGHWRGPLHGI 68 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK-LWDNGAVMLGKLNMDEFAMGSSN 133 +G+KD +G+ T+ SH+LD P L GA+++ K++ EFA G + Sbjct: 69 AVGVKDLIDVQGLPTRCGSHVLDDAPPADADAPVVAALRAAGAIVVAKMHTQEFAHGPTG 128 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + + GP +P D T + T G SSG ++A AG+L A +GTDTG S+R PA+ G Sbjct: 129 DAAATGPAHNP---HDPT-RITGGSSSGSAAAVAAGYLPLA-LGTDTGCSVRTPAALCGV 183 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+KPTYGR S G+ A SLD G +T V + + + G + A Sbjct: 184 VGLKPTYGRLSTHGVFPLAESLDHVGFLTTDVAAAQLAWSVLGGTADAGA---------- 233 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 I G+ VG+ + P ID + L AGA+ V + P + + A Sbjct: 234 ------RIAGLRVGVLVDDYWRAADPAIDPWATAAVEVLAAAGAEPVAVRTPMIEELVAA 287 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y +I EA + A + L G+D + R +GF Y+ + R Sbjct: 288 YPVIVGNEAYTTHAGW------LAERGQDYQPLIRE-RLLGFADRPARE-----YIGAQR 335 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYND 432 H L A +R + A GVDV++ PTT A P+G G+ + Sbjct: 336 T--RHRLVA-ALRAALDGAGGGAGGGGVDVLVLPTTRIRATPIGAPTTRIDGTDVPVRPA 392 Query: 433 VFTV--AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + + N+ G PA+SVPA + +P+G+Q++G E + V +E+ +RP Sbjct: 393 LLALNSPFNLTGWPAVSVPAPV--DGLPIGVQVVGVRVAERGVLDVAAALERA---WRP 446 >gi|224105229|ref|XP_002313734.1| predicted protein [Populus trichocarpa] gi|222850142|gb|EEE87689.1| predicted protein [Populus trichocarpa] Length = 497 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 23/310 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E++ +++ +LV+ Y+ I+ N +++ +EV A + +R N Sbjct: 16 IQETQQAFTENKLTSKQLVNFYLNQIQELNPLLHSVLEVNPDALDQAEKADQERESNQGR 75 Query: 69 R---DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 R D+ GIP+ +KD ATK + T SH L ++ V ++L + GAV+LGK ++ Sbjct: 76 RFLGDMHGIPVLLKDNIATKDKLSTTGGSHALLESEVARDAHVVERLRNAGAVILGKASL 135 Query: 125 DEFAMGSSNETSYYGPVISPW--RSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGT 178 E++ S YG + S W R + + + P GSS GS+ +VA + A S+GT Sbjct: 136 SEWSHFRS-----YG-IPSGWCARGGQAVNPYVEGGDPCGSSSGSAISVAANMVAVSLGT 189 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI P+ VG+KPT G SR G+I + D G I RTV D LL AI G+ Sbjct: 190 ETDGSILCPSDHNSVVGLKPTVGLTSRSGVIPISSRQDSVGPICRTVSDVVYLLDAIVGF 249 Query: 239 D--ECDAT---CVNLPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISW 291 D +C+AT +P Y++ L + ++G +GI + + + + P I T+ + Sbjct: 250 DPRDCEATKEASEFIPADGYKKFLKKDGLKGKRLGIVRNPFEIYFKDPVIVSTFDHHLEV 309 Query: 292 LKDAGAKIVE 301 L+ GA +V+ Sbjct: 310 LRRGGATVVD 319 >gi|315173122|gb|EFU17139.1| amidase [Enterococcus faecalis TX1346] Length = 482 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 132/525 (25%), Positives = 220/525 (41%), Gaps = 98/525 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +L+ + +S EL+ + ++ N ++N ++ +Q+A A +++ ++ G Sbjct: 9 QQLKEQKVSHTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKQQDTL-----FAG 63 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +K K G A S + S ++ G + LG+ N EF + Sbjct: 64 LPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGFKNI 123 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S PGGSSGG++A VA + + +D GGSIR PASF+G Sbjct: 124 TDPALYGPARNPWNLEHS-----PGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSG 178 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KP+ G R + FA +T ++RD+ L + G Sbjct: 179 LIGLKPSRGSMPVGPEGWRGWQGASTDFA--------LTISMRDTKALFYGLRG--SHSG 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRL-----------DYLSPTIDKTWQQGISWL 292 P+ +++ PK+ RL + P + +Q +L Sbjct: 229 APYQAPLAEWQTH------------PKKQRLKIALCTASPIGSMILPEATQAAKQAADFL 276 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENT 350 AG +I+EI P AL +YY ++ AE + A + ++ GL R K+ +E + T Sbjct: 277 AAAGHEIIEIPYPVDGAALIRSYYQMNGAETT---AMMNSIQQGLGRPIRKEEIEPFSWT 333 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 FGQ +I TYV S + +D + E Q D+ L+PTT Sbjct: 334 MH-QFGQ----KIPAATYVHSLQLWDQAAVT------------MEELFQKFDLFLSPTTA 376 Query: 411 TSAFPLGKE--------------ENNSGSMGHIYNDVF---------TVAVNMAGLPAIS 447 SA + ++ E + + D F T N+ G PAIS Sbjct: 377 FSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQLTPYTQLANLTGQPAIS 436 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P + +PLG+QL+ RE+ LF VG+ E+E + P + Sbjct: 437 LPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPESY 481 >gi|71735766|ref|YP_272704.1| amidase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556319|gb|AAZ35530.1| amidase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 514 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 133/492 (27%), Positives = 224/492 (45%), Gaps = 51/492 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ ELV +Q IE N+ Q+NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGSLTSAELVQDLLQRIEALNNNGPQLNAVIEVNPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G +++ V ++L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNINTGDKMQTTAGALAMVGSPAPHDAFVVKRLREAGAIIIGK 161 Query: 122 LNMDEFAM--GSSNETSYYG---PVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 N+ E+A G + + + G + P+ S+D P GSS GS+ +A + Sbjct: 162 ANLSEWAFFRGENPPSGWSGRDGQTLHPYNLSVD------PRGSSTGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA G VG++PT G SR G+I D G + R+V D+AI+L A+ Sbjct: 216 LGTETNGSIIQPAQTNGVVGLRPTLGLLSRTGLIPLTRRQDTPGPMARSVTDTAIMLTAM 275 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGIS 290 +G D D V ++ +++G +G P RL + S D +Q+ Sbjct: 276 SGTDPLDDATGQASTDTVNYFDHLSTDALRGKRLGYP---RLTWDDKSMDDDPDFQKAKI 332 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ AGA +V I +P + P + ++ + L Y R GL V D + + NT Sbjct: 333 SLQSAGAILVPIDVPDIDNS-PEFGVML-QDFKRELNAYLNTRPGLEVSTLDDIIAF-NT 389 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 S Q ++I + S+ D YL D A +Q +D ++ Sbjct: 390 ASPS-TQVYDQNLLIQS---SNTPVDPDYLSK-------ATDLRNANQQLIDGLV----- 433 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++++ ++ + F +AG P I+VP + MP GL + + + E Sbjct: 434 --------QQHSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSKAWDE 485 Query: 471 ETLFSVGQIIEK 482 L S +E+ Sbjct: 486 ANLLSYAYALEQ 497 >gi|67920368|ref|ZP_00513888.1| Amidase [Crocosphaera watsonii WH 8501] gi|67857852|gb|EAM53091.1| Amidase [Crocosphaera watsonii WH 8501] Length = 469 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 214/507 (42%), Gaps = 69/507 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + +R + IS +EL Y+ IE N ++ ++ V A+ A A+ ++ Sbjct: 5 DLAFTPALDLAQLIRDRSISPLELTQLYLDRIEKYNPKLGSFFHVAAETALQEAQTKTEQ 64 Query: 63 IIN-GDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 ++N D L G+P IKD A G+ L +Y+ VT ++ G ++ Sbjct: 65 LLNTSDPNSLPLFFGVPTTIKDLNAVAGMPLTYGVAALRENIANYDDGVTTRMKGAGFIV 124 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK + E + P +PW +D +T GGSSGG++AAVA C + G+ Sbjct: 125 LGKTATSQLGSFPFTEPPGFSPARNPWH-LD----YTAGGSSGGAAAAVAAGFCPVAQGS 179 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PA+ G VGIKP+ GR S + + + G + RTV D+A LL ++GY Sbjct: 180 DGGGSVRGPAACCGLVGIKPSRGRISNAPVGDYQSGISSNGPLARTVADAAALLDVMSGY 239 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP----------TIDKTWQQG 288 D + P + A Q + + D++ P T+DKT + Sbjct: 240 IPGDPYWLPSPEISFLEATKQVSTPLKIAF-----CDHMPPFTKSEPIVKETVDKTAK-- 292 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 L ++ +EI+ P + ++E + Sbjct: 293 ---LLESFGHFLEINCPSVE---------------------------------ALIEPFT 316 Query: 349 NTRSIGFGQEVKHRIM---IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 G G M + + R YL+A + + R FE DV+L Sbjct: 317 KIWQSGIGASGLPPSMLSPLNNWFREQRVSAGEYLQAVQQIQIFSRQLVVFFEH-FDVLL 375 Query: 406 TPTTPTSAFPLGKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQ 462 P +G+ + S ++ I N + A N +GLPA+++P A E +P+G+Q Sbjct: 376 LPVYLHQPIKIGQWAHLSPQETLEKIINWIAPCPAFNASGLPAMTLPMAQDENGLPVGIQ 435 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRP 489 L+G+P E TL + +EK + P Sbjct: 436 LVGKPADELTLIRLASQLEKSKNFSLP 462 >gi|99079899|ref|YP_612053.1| amidase [Ruegeria sp. TM1040] gi|99036179|gb|ABF62791.1| Amidase [Ruegeria sp. TM1040] Length = 443 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 136/493 (27%), Positives = 230/493 (46%), Gaps = 66/493 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + M+ ++ + S +I V L ++Y+ AI++ Y +V ++ARA A+ + Sbjct: 1 MQDWLTMSAAQLGRGIASGEIDPVALTEAYLTAIDSHPETARIYTKVTHERARAEAKAAQ 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G R L+G+PI KD F + G+ T++ S +L G P ++ V G+V L Sbjct: 61 ERAKAGLRRSPLDGVPISWKDLFDSAGVETESGSDLLKGRIPDTDALVLDTATALGSVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMD---STDKFTPGGSSGGSSAAVAGFLCAASI 176 GK +M E A + G ++P ++ + + PGGSS G++A+VA L A +I Sbjct: 121 GKTHMSELA--------FSGLGLNPIKATPPCVNDPEAVPGGSSSGAAASVAFGLAAGAI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+DTGGS+R P+++ VG+K T GR S G++ D G + R+V D+A++L I Sbjct: 173 GSDTGGSVRIPSAWNDLVGLKTTSGRVSLEGVVPLCLKFDTIGPLARSVEDAALMLALIE 232 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G + PD E A +++G + D L+P + + L++ G Sbjct: 233 G---------SATAPDLEGA---TVEGKRFADLRTVAQDDLAPEVATAHAAALDKLREEG 280 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A+IV + +P A+ I+ EA YGL KD++E + Sbjct: 281 AEIVPLEVPELPDAMALSAILFTTEA-----------YGLW---KDVIEASPDL----MF 322 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ---GVDVILTPTTPTSA 413 E+ R G S Y + + + ++R A++Q G D +L P P Sbjct: 323 PEILARFRSGAE-FSGSDYVAAWAKLEQVRM--------AWDQAVAGFDAVLAPAAPILP 373 Query: 414 FPLGKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 L + +++ + ++ + N T N+ G+ A+S+P GLQ+IGQP Sbjct: 374 PNLARLQSDHDYYVTSNLMALRN---TRIGNLMGVCALSLPTGTPS----CGLQVIGQPD 426 Query: 469 REETLFSVGQIIE 481 EE L +G +E Sbjct: 427 CEEALLRIGAGVE 439 >gi|126660125|ref|ZP_01731244.1| Amidase [Cyanothece sp. CCY0110] gi|126618568|gb|EAZ89318.1| Amidase [Cyanothece sp. CCY0110] Length = 469 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 134/493 (27%), Positives = 217/493 (44%), Gaps = 55/493 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + +R + IS +EL Y+ IE N Q+ ++ V A+ A A+E ++ Sbjct: 5 DLAFTPALKLAQLIRDRSISPLELTQLYLNRIETYNPQLGSFFFVAAEMAIQDAKEKTEQ 64 Query: 63 IIN-GDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +IN D ++L G+P IKD A + L Y+ VT ++ G ++ Sbjct: 65 LINISDPKNLPPFFGVPTAIKDLNAVAKMPISYGVAALKDNIATYDDGVTARMKGAGFII 124 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK + E + P +PW +D +T GGSSGG+++AVAG LCA + G+ Sbjct: 125 LGKTATSQLGSFPFTEPPGFPPTRNPWH-LD----YTSGGSSGGAASAVAGGLCAIAQGS 179 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PA+ G VGIKP GR S + + + G + RTV D+A LL ++GY Sbjct: 180 DGGGSVRGPAACCGLVGIKPAKGRVSHAPVGDYQSGISSNGPLARTVADAAALLDIMSGY 239 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP------TIDKTWQQGISWL 292 D + P + A Q + + D++ P + +T ++ L Sbjct: 240 ITGDPYWLPAPEISFLEATKQVSPSLKIAF-----CDHIPPFTKSEIIVKETVKKTAKLL 294 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 + G + E+ P + + + II + ++ GL + L + + Sbjct: 295 QSLGHSL-EMKCPSVESLIEPFTIIWQSGIGAS---------GLPSKVLSPLNRWFKEQQ 344 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 I G YL+A + R AF DV+L P Sbjct: 345 ISAGD---------------------YLQAVHQMQIFSRQLV-AFFDDFDVLLLPVYLHQ 382 Query: 413 AFPLGKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 +G+ + S ++ I N + A N +GLP I++P A EK +P+G+QL+G+P Sbjct: 383 PIKVGEWSDLSPQETLDKIGNWIAPCPAFNASGLPVITLPMAQDEKGLPVGIQLVGKPAD 442 Query: 470 EETLFSVGQIIEK 482 E TL + +EK Sbjct: 443 ELTLIRLAAQLEK 455 >gi|301097937|ref|XP_002898062.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Phytophthora infestans T30-4] gi|262105423|gb|EEY63475.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Phytophthora infestans T30-4] Length = 600 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 129/491 (26%), Positives = 218/491 (44%), Gaps = 71/491 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIE-NSNSQ--MNAYIEVVAQKARAAAEESDKRII 64 ++++ R S +++ V++ + + A+E N S+ +N ++E ++ A A+ S +R Sbjct: 140 SIADYTSRYISGEVTPVQVAKALLAAVEKNQQSEYPLNLFVEKHDEEILAQAKASAERYA 199 Query: 65 NGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPH---YESTVTQKLWDNGAVMLG 120 G+ L+G+P+ IKD KG H G+ + +L GA++LG Sbjct: 200 RGNPLGVLDGVPVAIKDEVHIKG-HRMFTGTSFLGYEEEPATMDDPPVARLRAAGAIILG 258 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 NM E G + +YG V +P+ K GGSS GS+AAV L ++G D Sbjct: 259 TTNMHEIGSGVTGYNMHYGAVRNPYNP-----KCYTGGSSSGSAAAVTSGLVPLALGLDG 313 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR P+S G VGIKPT+ R + PS+ G I +VRD+AI ++G DE Sbjct: 314 GGSIRIPSSMCGVVGIKPTFQRIPSAA--ADCPSVAHVGPIAGSVRDAAIGYAIMSGGDE 371 Query: 241 CDAT--CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 PV + S++ + +G +Y ++ SP I + + + L+ GA+ Sbjct: 372 TSFLRGMTQPPVDLHSFEDTSSLKDVRIGYFSDYT-NHSSPEIAEAVTRTLKALETRGAE 430 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 ++E L H A+ I +E + NL ++ YE Sbjct: 431 LIETPLHHLTAIHVAHSITITSEFAQNLDKF-----------------YER--------- 464 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-------PT 411 + +L A+++R R F E VD +TP+T P Sbjct: 465 ----------------FAMDFLAAQRVRAFALRQFQENVLSKVDAFVTPSTGITAPEIPL 508 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 A +G E N+ +G+I+ F+V N+ G+P +SVP + +P+ +Q ++E+ Sbjct: 509 EALAVG--ELNAAQLGNIFR--FSVYGNLIGVPGMSVPIGYDSRGLPMSIQFQTAHWQED 564 Query: 472 TLFSVGQIIEK 482 T+ + E Sbjct: 565 TMLRLAHTTEN 575 >gi|86750696|ref|YP_487192.1| amidase [Rhodopseudomonas palustris HaA2] gi|86573724|gb|ABD08281.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 449 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 139/491 (28%), Positives = 224/491 (45%), Gaps = 57/491 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEES 59 M++L +AV + L + +A +LVD + I+++ + A+I V AR AAE Sbjct: 1 MTKLPTLAVLAAD--LDAGRTTARKLVDDCLARIDDAAGEGARAFIHVDRDAAREAAEAM 58 Query: 60 DK-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAV 117 DK R I GIP+ IKD F +G T+A S LD P ++ +L G V Sbjct: 59 DKLRAIKAAPSPYAGIPVSIKDLFDIRGQVTRAGSRALDDNPPAEDDAPAVARLRRAGFV 118 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++G+ NM EFA +YG +P + + PGGSS G++ +VA + A +G Sbjct: 119 VIGRTNMTEFAYSGIGINPHYG---TPKSAYGRDVGYVPGGSSSGAAVSVADGMAHAGLG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGS R PA+F G VG KP+ R R G + + SLD G + R+V A+L +A Sbjct: 176 TDTGGSCRIPAAFNGIVGYKPSQQRVPRDGAVPLSFSLDSIGPLARSVACCAVLDAVLA- 234 Query: 238 YDECDATCVNL-PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D V L P P ++G+ + +P LD L + +++ + L G Sbjct: 235 ----DEEIVPLAPRP---------LKGLRLAVPTTVALDELDEAVRLAFERALKALAGHG 281 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSI 353 A I +I +P + ++P A L Y RY + +G ++Y+ Sbjct: 282 AIIEKIEVPE-------FNDVAPLSAKGGLTAAESYAWHRYLIVAQG----DVYD----- 325 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 V+ RI+ G ++ D+ + ARK +LI R T D ++ PTT + Sbjct: 326 ---PRVRERILRGESQSAADYVDT--ITARK--SLIARATTRLAPY--DAVVMPTTANTP 376 Query: 414 FPLGK-EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFRE 470 + ++ + + ++ +NM AIS+P C + + P+GL + G + Sbjct: 377 PAIADLADDKAFTKANLLALRNCTLINMIDGCAISLP---CHQDGEAPVGLMVAGVNGAD 433 Query: 471 ETLFSVGQIIE 481 +F V +E Sbjct: 434 RDVFEVAAGVE 444 >gi|70996580|ref|XP_753045.1| amidase family protein [Aspergillus fumigatus Af293] gi|66850680|gb|EAL91007.1| amidase family protein, putative [Aspergillus fumigatus Af293] Length = 505 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 132/524 (25%), Positives = 230/524 (43%), Gaps = 68/524 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + VSE D LR + + E+V +Y+ I NS + A I V + A A + D+ Sbjct: 8 DIQELTVSEYHDALRDRRTTCTEVVVAYLDRISRYNSLLKALI-TVNKNALDVARQRDQE 66 Query: 63 ---IINGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 ++ +D L G+P+ +KD ++T + T + L + ++ V KL Sbjct: 67 TEALLQQHGKDHTLPPLHGVPVILKDTYSTLDMPTTSGVKALHSLQTKADAFVVTKLRRA 126 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GA++LGK N+ E ++ +S G +P+ + TPGG SGG++AA+A L Sbjct: 127 GAIILGKANLHELSLEGVTVSSLGGQTRNPYDL-----RRTPGGLSGGTAAALAANLALV 181 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 G DT S+R PAS +G +PT G+ SR GII + D AG + RTV+D +L Sbjct: 182 GCGGDTMNSLRSPASACSIIGFRPTRGQISRRGIIPVTDTQDVAGPMARTVQDVRLLFDV 241 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + G D D + ER+ + + +G+ + + D P Q + L Sbjct: 242 MKGEDAGDEVTTDCQRDAMERSSETCGRRKRIGVLRSFFADDGDPEGSIVNQTVLDALDK 301 Query: 295 AGAKI-VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 A A + VE+ Q A++ I +++++ Y E + +++ + + I Sbjct: 302 ARANVPVELVTLSPQR---AHWDIPTLISTADMQAY---------EFRSVIDTFLQSSLI 349 Query: 354 GF------------GQEVKHRIMI---------GTYVLSSRCYDSHYLRARKIRTLIKRD 392 F G+ ++ + G Y + S Y+S R I L K+ Sbjct: 350 AFTPHDSLNSIVASGEYLQEAVTPALYRTLQKDGPYTMQSPEYES---RLATIAAL-KKS 405 Query: 393 FTEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 + FE+ +D ++ P P+ GSM + A + G PAI +PA Sbjct: 406 VEDCFEEHQLDALVYPHQRQLVAPI-------GSMVQPRRNGILAA--LTGRPAICLPAG 456 Query: 452 LCEKK------MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + +P+GL+L+G+P+++ L + + E+ RP Sbjct: 457 FSPQTESAPQGVPIGLELMGKPWQDVDLLDIAEQFERVIQGRRP 500 >gi|116625702|ref|YP_827858.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116228864|gb|ABJ87573.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 583 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 119/413 (28%), Positives = 191/413 (46%), Gaps = 45/413 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + EL F V + ++S+ +S+ +L Y+ ++ + ++ I + A A +D Sbjct: 137 LEELAFSRVVDLAPLVKSRAVSSTDLTKMYLARMKKYSPKLLCLITSTEEFALEQAAAAD 196 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I G R L GIP G+KD F TKGI T + ++TV ++L GAV++ Sbjct: 197 REIRAGHYRGPLHGIPFGLKDLFDTKGILTTFGAEPYQTRVADKDATVVERLHKAGAVLM 256 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 KL+M A G + G +PW + + T + GS+ ++A + GF ++GT+ Sbjct: 257 AKLSMGALAQGG---LWFNGMTKTPW-NYEQTSSGSSAGSASSTAAGLVGF----TLGTE 308 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P+ GTVG++PTYGR SR G ++ + ++D+ G I R V D AI+L A+ G D Sbjct: 309 TLGSIISPSQACGTVGLRPTYGRISRFGAMALSWTMDKVGPICRGVEDCAIVLNAVYGPD 368 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T P + + + GM +GI ++ D + K + Q + LK AG K+ Sbjct: 369 GRDRTVGADP---FHWEPRKPLAGMRIGILQK-DFDRYTGEQKKVYDQALEDLKKAGVKM 424 Query: 300 VEISL----PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIG 354 P ++ L A A A ++ R DG LR + D + +R I Sbjct: 425 TPTEFVEDGPTIRFLLSA----EAAAAFDDITR-DGQVRNLRGQSPGDWPNQFRTSRMIP 479 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 Y+RA++ RT + R F E F DV++ P Sbjct: 480 ---------------------AVEYIRAQRARTQLIRKF-EKFMDDWDVLVMP 510 >gi|288962834|ref|YP_003453128.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] gi|288915100|dbj|BAI76584.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] Length = 498 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 134/481 (27%), Positives = 218/481 (45%), Gaps = 50/481 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + ++++E R R+ +S+VEL+++ + I+ N +NA + + AR AAE++D Sbjct: 1 MPSVADLSLAEMRRRIADGSLSSVELLEACLARIDLVNPAVNAVVALDIDGARKAAEQAD 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + GD L GIP+ +KD T G+ T S + P + +L GA++ Sbjct: 61 AAMRRGDGVGPLHGIPLLVKDTQDTAGLRTTYGSPLFANHVPAADQGSVARLRAAGAIIF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E+A G + +G +P+ + S+ SSGGS+ A+A + + G+D Sbjct: 121 GKTNTPEWAAGGNTRNPVHGATGNPFDPLRSSAG-----SSGGSAVALACGMAPIATGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGR-CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 TGGS+R PA + G VG++P+YG S I ++ +L G + R V D A++L +A Sbjct: 176 TGGSLRNPAGYAGIVGMRPSYGLVASERRAIGWS-NLSTDGPMARNVADLALMLSVMASD 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ-GISWLKDAG- 296 D D +LP ++++G R D P I + I+ +D G Sbjct: 235 DGRDPLAYSLP--------GETVRG---------RADRWFPVIPADLSRLRIAATEDFGF 277 Query: 297 ----AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-- 350 +I + ++ P EA+ + A D LR L M+ T Sbjct: 278 APTAQEIRRVFRDRVRHIAPLAGAC--VEATPDCAGADDAFAVLRA--SVFLAMHARTFR 333 Query: 351 -RSIGFGQEVKHRIMIGT-YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 R G V+ I G Y L Y RA +T I R F ++F D++++PT Sbjct: 334 ERPDMLGPNVRANIEEGLGYSLED------YTRAATTQTRIYRSF-QSFFATHDLLISPT 386 Query: 409 TPTSAFPLG----KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 S P +E + + + + V +AG PA+S+P L E MP GLQ++ Sbjct: 387 ITVSPRPWSELYPREIDGRPTRSYFHWLALAYGVTLAGHPALSLPVGLDESGMPFGLQIV 446 Query: 465 G 465 G Sbjct: 447 G 447 >gi|75910722|ref|YP_325018.1| amidase [Anabaena variabilis ATCC 29413] gi|75704447|gb|ABA24123.1| Amidase [Anabaena variabilis ATCC 29413] Length = 467 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 140/493 (28%), Positives = 219/493 (44%), Gaps = 58/493 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESD 60 ++L F E +R +++S +ELV+ Y+Q IE N ++ +Y V A+ A A A+ +++ Sbjct: 4 TDLAFTPALELAQLIRHREVSPLELVEIYLQRIELLNPELGSYFTVTAELASADAKAKTE 63 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+PI IKD A G+ + L P ++ V ++ G +LG Sbjct: 64 LLTTTSELPPFFGVPISIKDLNAVAGVPCTYGNPALLNNIPEFDDGVVTRIKQAGFTILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K E E + + P +PW ++TPGGSSGG++AAVA LCA + G+D Sbjct: 124 KTATSELGSFPYTEPTGFVPARNPWNL-----EYTPGGSSGGAAAAVAAGLCAIAQGSDG 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G VGIKP GR S+ + + G I RTV D+A LL A++GY Sbjct: 179 GGSIRGPAACCGVVGIKPARGRVSKAPVGDRLAGISTNGPIARTVADAAALLDAMSGYVT 238 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTI---DKTWQQG----ISW 291 D + P P + A P + R+ + + P + D QQG + Sbjct: 239 GDPYWLPDPEPSFLTAAQTP--------PTQLRIAFATDIPPLGEADANCQQGVLTTVKL 290 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L+ G I + SL + P + A S L +IL+ Sbjct: 291 LEQLGHHIEQKSLDLSGLVEPFQIVWQSGVAGSGLP-------------PEILQ------ 331 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++L+ + Y++A ++ R AF +DV++ P Sbjct: 332 ------------PVNRWLLARTGTVADYIQAVYKMQIVARQIV-AFFDNIDVLVLPVYLH 378 Query: 412 SAFPLGKEENNS--GSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 S +G+ S + I N V + N G PAI++PA +P+ +QLIG+P Sbjct: 379 SPIRVGEWAALSPEDTFQQIINWVAPCPLANATGQPAIALPAGFDRNGLPISVQLIGRPA 438 Query: 469 REETLFSVGQIIE 481 E TL S+ IE Sbjct: 439 AEATLISLAAQIE 451 >gi|293394591|ref|ZP_06638885.1| amidase [Serratia odorifera DSM 4582] gi|291422900|gb|EFE96135.1| amidase [Serratia odorifera DSM 4582] Length = 449 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/274 (32%), Positives = 129/274 (47%), Gaps = 27/274 (9%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFR 100 A+I V A+ A ESD+R G A L+G+P+ IKD F G T S +L Sbjct: 40 RAFIRVYHAWAQQQAAESDRRRAAGQALSPLDGVPVSIKDLFDVAGEATTGGSRVLTDAA 99 Query: 101 P-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 P + V +L G V++GK NM EFA +Y +PW+ + PGGS Sbjct: 100 PAQRHAAVVARLLQAGVVIVGKTNMTEFAYSGLGINPHYATPANPWQR---AARRIPGGS 156 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 S G++ AVA + +IG+DTGGS+R PA+F G G KP+ R G+ +PSLD G Sbjct: 157 SSGAAVAVADGMGFGAIGSDTGGSVRIPAAFCGLTGYKPSACRIDMAGVQPLSPSLDSVG 216 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMT---VGIPKEYRLDY 276 +I V D CV L ERAL+ + +P+ LD Sbjct: 217 VIAHGVAD-----------------CVALDAAIAERALEPQTLPLAQARFAVPQTLVLDD 259 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 L + + + + L AGA+I +LP +++A Sbjct: 260 LDDAVATAFDRALQRLTLAGARI--DALPCSEFA 291 >gi|86750739|ref|YP_487235.1| amidase [Rhodopseudomonas palustris HaA2] gi|86573767|gb|ABD08324.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 477 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 114/462 (24%), Positives = 209/462 (45%), Gaps = 37/462 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D+LR+ +++ ++L+D+ Q I + +NA + +ARA A + K+ + L G Sbjct: 17 DQLRTGEVTPLDLLDALEQRIAEVDGAVNALPTLCFDRARARAADLMKKP-QSERGLLAG 75 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD A +G+ T S I P + + L +G V+ K N EF G++ Sbjct: 76 LPVPIKDLTAVEGVRTTQGSPIFKDHVPTRSDLMVEHLEASGGVVYAKSNTPEFGAGANT 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +PW S G + + A+ +L + G+D GGS+R PASF G Sbjct: 136 FNEVFGATRNPWDL--SRSAAGSSGGAAAALASGTAWL---AHGSDMGGSLRNPASFCGV 190 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG++P++GR + + +L G + R V D A+LL A++G D + PV + Sbjct: 191 VGLRPSFGRVAHTPAAAIDRNLGVQGPMARNVEDVALLLDAMSGEHAADPLSLPSPVTSF 250 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A + + V + + + P + ++ ++G +VE + P A Sbjct: 251 LAAARARTKPLRVAYSPDLGITPVDPEVAAITRKAAERFAESGV-VVEQAQPDLSEAHEC 309 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ + + + A LR + +D+L+ EV I G L+ Sbjct: 310 FHVLRAFDFAISKAEL------LRTK-RDLLK-----------PEVIWNIEQG---LALS 348 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 D A+++ + T AF + D++L P T T+ FP+ ++ + GH +++ Sbjct: 349 VDDLARAEAQRVAMAAR---TIAFFETYDLLLCPATITAPFPV-EQRYLAECNGHTFDNY 404 Query: 434 -----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 A+ + PA+S+P +P+GLQ+I +P E Sbjct: 405 VEWLGIVYAITLVCCPALSLPCGFTSAGLPVGLQMIARPRNE 446 >gi|239981757|ref|ZP_04704281.1| indoleacetamide hydrolase [Streptomyces albus J1074] Length = 455 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 133/487 (27%), Positives = 215/487 (44%), Gaps = 50/487 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R +SA EL DS++ IE N ++NA ++ A +AR A D+R G+ L G+ Sbjct: 1 MRGGQVSAAELTDSHLARIEAVNPRVNAVTQLWADRAREEAARLDRRRAAGEELGPLAGV 60 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM-GSSN 133 P +K+ +G+ T + ++ +L GA+ +G N+ + G Sbjct: 61 PFTVKESTPVEGVPTTFGAERFRDLVARADALPVARLRAAGAIPVGHSNIPTMILAGMHT 120 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +G ++PW TPGGSSGG + AVA + +G D+GGS+R PA F G Sbjct: 121 RSELFGDTVNPW-----DPARTPGGSSGGDAVAVATGMAPLGLGNDSGGSVRIPAQFCGV 175 Query: 194 VGIKPTYGRCSR---------LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 G+KP+ GR G+ S L G + R+V D + + +AG D D Sbjct: 176 AGLKPSTGRFPADHRVLGPDDPGLASQL--LVTDGPLARSVADLRLAYEVLAGTDPRDPR 233 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS- 303 V PVP Y L ++ V P + + P++ + + L+DAG ++ E+ Sbjct: 234 AV--PVPAYGERLPGPLKVAVVADPGGH---GVHPSVRQAVARAADALRDAGYELCEVPD 288 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 +P AL AY I+ E + + + VR L G + E+ Sbjct: 289 VPRLDEALEAYGRITVTEFAPS---WPVVRTLLGPGGDRYIAAAMEQTPPATAAELT--A 343 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE-AFEQGVDVILTPTTPTSAFPLGKEENN 422 + GT++ R + + +L A + L+ FTE E G++ S G+E Sbjct: 344 LTGTWLGVRRAW-AEFLDAYPL--LLGPVFTEPPVEPGLE---------SRDRAGRERVG 391 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SG A + AG+P ++VP L + +P G+QL+G+ FRE+ + Q IE Sbjct: 392 SGMR-------LCTATSFAGVPGVAVPTGLVD-GLPSGVQLVGRAFREDLCLAAAQAIED 443 Query: 483 EAGYFRP 489 G P Sbjct: 444 RLGVLTP 450 >gi|333023559|ref|ZP_08451623.1| putative amidase [Streptomyces sp. Tu6071] gi|332743411|gb|EGJ73852.1| putative amidase [Streptomyces sp. Tu6071] Length = 477 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 126/488 (25%), Positives = 214/488 (43%), Gaps = 48/488 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NGDARDLEGI 74 +R +++S VE+VD+ + +E + +++A+ V ++ARA+A R+ G A L G+ Sbjct: 1 MRGREVSPVEVVDAVLARMEATEPRLHAFCTPVPERARASARALADRLARGGTAGPLAGV 60 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+G+KD T+G+ T + S F P + V +++ AV+LGK N EF ++ Sbjct: 61 PLGVKDLLPTRGLRTTSGSVAYRDFVPDEDDIVVERVRAADAVVLGKTNTSEFGYSATGH 120 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +PW + + TPGGSS GS+AAVA ++G+D GGS+R PA+ G V Sbjct: 121 NPLFETTRNPWDT-----RLTPGGSSAGSAAAVAAGAGPLALGSDGGGSVRVPAALCGLV 175 Query: 195 GIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 G K + GR L +S SL+ G + RTV D + L +AG D D + Sbjct: 176 GFKASMGRVPVYPGCRDEALPGVSGWESLEHIGPLARTVADIGLALSVLAGPDPRDRHSI 235 Query: 247 NLPVPDY----ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIVE 301 D+ R + I G+ + + + P + + S DA G ++ Sbjct: 236 PCGDVDWRGAVRRGAGEGIAGLRIAYSPDLGYLAVDPEVRRVVDAAASVFADALGCEVER 295 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P + P +A + L D D+ M G Sbjct: 296 VE--------PGWA--DPGDAFAALIMAD----------TDLRGMRALVAEHGEAMSPHL 335 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R M+ + D+ +R + + + D++LTPT+ AFP+G E Sbjct: 336 RAMLARAWTAEEFTDAEMVRKGVVNRMAR------LMSRYDLLLTPTSCVPAFPVGIEGP 389 Query: 422 NSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + + F N+ G PA+S+PA +P+GLQL+G+ + T+ Sbjct: 390 ATIAGRPVPPTAWTGFCAPANLTGQPALSLPAGRTGAGLPVGLQLVGRHLADATVLRAAA 449 Query: 479 IIEKEAGY 486 E+ + + Sbjct: 450 AFEQASPW 457 >gi|311032752|ref|ZP_07710842.1| amidase [Bacillus sp. m3-13] Length = 496 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 140/490 (28%), Positives = 225/490 (45%), Gaps = 57/490 (11%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + E + + + ++++ ELV Y+ I + + ++N+ +EV A +R + Sbjct: 19 IEELQAAMENGEVTSKELVLMYLHRISKYDKNGPKLNSVLEVNPDAVFIAEALDLERDQS 78 Query: 66 GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIP+ +KD T +HT A S L+ +S V +L G V+LGK NM Sbjct: 79 GARGPLHGIPVLLKDNIDTGDMMHTSAGSLALEHHVAAEDSAVASQLRKAGTVILGKTNM 138 Query: 125 DEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A + + +S G V++P+ +F GGSS GS AAVA L AA+IGT+ Sbjct: 139 TEWANFMTEKMPNGYSSRGGQVLNPY----GPGQFDVGGSSSGSGAAVAAGLAAAAIGTE 194 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS VGIKPT G SR GII + S D AG +T++V D+A+LL A+ D Sbjct: 195 TSGSILSPASSNSIVGIKPTVGLISRRGIIPISFSQDTAGPMTKSVTDAAVLLSALTETD 254 Query: 240 ECDATCVNLPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 E D P P L + + GM +G+ ++ Y S ++ I+ L++ G Sbjct: 255 EKDIATKTNPTPGISYTSFLLKEGLNGMRIGVARDPYFTYFSDEEALLMEEAIASLREQG 314 Query: 297 AKIV-EISLPHTQYA---LPAYYIISPA-----EASSNLARYDGVRYGLRVEGKDILEMY 347 A+++ I +P + L +Y P+ + + ++ + KD +M Sbjct: 315 AEVIGSIDIPFAKEEWDYLTLFYEFKPSLNAYLRNTGSSVPIKSLQDLIAFNKKDSSKML 374 Query: 348 ENTRSIGFGQEVKHR-IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 ++ +++ + KH + LSSR D + R + +++ E +D ILT Sbjct: 375 KHNQTV-LEESDKHSGTLTEEEYLSSREKDLYRSREGGLDAVME-------EHTLDAILT 426 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P + P AG P+I+VPA EK P+G+ + Sbjct: 427 PNNFGAGIPA-----------------------KAGYPSITVPAGYTEKGKPVGVTFTAR 463 Query: 467 PFREETLFSV 476 F E TL + Sbjct: 464 AFEESTLIQI 473 >gi|118592593|ref|ZP_01549984.1| Amidase [Stappia aggregata IAM 12614] gi|118434940|gb|EAV41590.1| Amidase [Stappia aggregata IAM 12614] Length = 383 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 120/423 (28%), Positives = 178/423 (42%), Gaps = 71/423 (16%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 +G+ + +KDC G AC P + V + L +G ++GK NM E A G Sbjct: 20 DGLSVAVKDCIDIAG-EVTACGSAAVSHAPSEHADVVKSLLASGCKIIGKANMHELAFGV 78 Query: 132 SNETSYYGPVISP-WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + + +G ++P W D+ PGGSS GS+ AVA LC S+GTDTGGS+RQPA Sbjct: 79 TGVNTVFGTPVNPNW-----PDRI-PGGSSSGSAVAVAAGLCDFSVGTDTGGSVRQPAIC 132 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC--DATCVNL 248 G G+KPT+ R SR G SLD G+ RT SA L +A+A D TC Sbjct: 133 CGIYGLKPTFARISRKGCHPADSSLDCVGVFART---SAGLTQAMAASDPSFKTETCTTA 189 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P RL ++S D + + L + I+L Sbjct: 190 P-----------------------RLAWVSTDPDPSGDS-FATLSRKLPGLERITLDAFD 225 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A A I E + +G +E + L GQ+VK RI Sbjct: 226 EAFAAGMTIISYETAQA--------FGHLLEAEPPL-----------GQDVKARIAKAQS 266 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGS 425 V S+ + +R R FTEA + + D ++ P PT L E S Sbjct: 267 VKSAEVKAAEAVRTR---------FTEAVDTALEQCDALIMPALPTVPPTL---EAASDP 314 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 I F N++G P++ +P A+ + +P+GLQ++G+ + L ++ + + Sbjct: 315 AQIIPLTRFLRPFNLSGHPSLVLPFAIVDGSLPMGLQIVGRKADDARLCAIAEWLADTFP 374 Query: 486 YFR 488 FR Sbjct: 375 MFR 377 >gi|115352760|ref|YP_774599.1| amidase [Burkholderia ambifaria AMMD] gi|115282748|gb|ABI88265.1| Amidase [Burkholderia ambifaria AMMD] Length = 490 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 128/477 (26%), Positives = 211/477 (44%), Gaps = 38/477 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDAR-DLEG 73 L+S+ ISA EL+D+++ I N ++NA + VV A R A E D G+ + L G Sbjct: 31 LKSRQISACELLDAHLARIATINPRVNALVTVVDSDALRTRARELDTHWARGEWQGPLHG 90 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ KD AT+G+ T S + P +++ + ++ GA+M+GK N EF GS Sbjct: 91 LPVSQKDLTATRGVRTTFGSTLFAEHVPQHDALIVRRCASAGALMIGKSNTPEFGAGSHT 150 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +PW D T GSSGG++AA+A + + G+D GGS+R PA++ Sbjct: 151 FNEVFGATRNPW---DLTRSAG--GSSGGAAAALACGMNPLACGSDMGGSLRNPAAWNNV 205 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG++P+ GR R ++ +L G + R V D+A+LL AIAG AT + P + Sbjct: 206 VGLRPSPGRVPRAPDLNGWATLGVDGPMARDVADTALLLSAIAGPSGETATGIAEPGACF 265 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + L++ +G + + + + P I + G + VE P A Sbjct: 266 AQPLERDFRGTRIAMSRGLPGVPVDPEIRRAVDAQARVFTSLGCE-VEFDDPDLTEAEDL 324 Query: 314 YYIISPAEASSNLARYD-GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 + I + L +D R L+ E D ++ + + G+ +V + Sbjct: 325 FRIERAWMIGTLLDGFDERQRAALKPELHDEYRLHRSLSAADLGR---------MFVRKT 375 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLGKEENNSGSMGHIY 430 R ++ ++R AF Q + PTT F L + G Y Sbjct: 376 RLFE-------RMR---------AFLQRYAFYVLPTTQVMPFDAALRAPADVLGVESTTY 419 Query: 431 NDVFTVAVNMAGL--PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 D V ++ P +SVP E +P+G+Q++G + + G E AG Sbjct: 420 IDWMRVCWLLSSTEAPILSVPCGFSEAGLPIGMQIVGGYRDDWGVLQFGHAYEVAAG 476 >gi|115375280|ref|ZP_01462545.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Stigmatella aurantiaca DW4/3-1] gi|115367747|gb|EAU66717.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Stigmatella aurantiaca DW4/3-1] Length = 516 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 127/488 (26%), Positives = 220/488 (45%), Gaps = 43/488 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F V+ + S+ +S+ L Y++ + + Q+ I + + A A +D Sbjct: 58 DIAFAPVTALSRWIESRALSSERLTSLYLERLRRLDPQLKCVITLTPELALQQARRADAE 117 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP G KD T GI T + P ++T +L GAV++ K Sbjct: 118 IAAGRYRGPLHGIPWGAKDLVDTAGIATTYGAEPFRNRIPSEDATAVARLHQAGAVLVAK 177 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL--CAA-SIGT 178 L++ A+ N+ + G +PW F G+SG S+ A C S+G+ Sbjct: 178 LSLGALAL---NDIWFGGQTKNPW--------FLDEGASGSSAGPGAATAAGCVGFSLGS 226 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +TGGSI P+ G G++PT+GR R G ++ SLD+ G +TRTV DS ++L A++G Sbjct: 227 ETGGSIISPSMRCGITGLRPTFGRVPRTGAMTLCWSLDKLGPMTRTVEDSLLVLSALSGP 286 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D V + D++ ++G+ VG + + +D+ + LK G K Sbjct: 287 DAGDVASVPSKL-DFDAT--AGVKGLRVGYVPAWMEQSPATEVDRA---ALETLKQLGLK 340 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 V + LP Y+ + ++I AEA++ + +G+ + + + N F Q Sbjct: 341 PVAVQLPDWPYS--SLHVILFAEAAAAFEELT-LSHGVDTMAMQVPDAWPNL----FRQ- 392 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 G ++ + + LR RK+ + R + VDV+L P+ + Sbjct: 393 -------GRFLSAVDMVQADRLR-RKVAGEMARVMAD-----VDVLLVPSLREDILTITN 439 Query: 419 EENN-SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + S ++ + ++ + A P V +++MP G+ LIG+ F E TL VG Sbjct: 440 HTGHPSLTLRTGFIEIDRARSDWAPDPKKPVVPFSPKRRMPHGVTLIGRLFEEGTLGRVG 499 Query: 478 QIIEKEAG 485 +E+ +G Sbjct: 500 MALERASG 507 >gi|297623708|ref|YP_003705142.1| amidase [Truepera radiovictrix DSM 17093] gi|297164888|gb|ADI14599.1| Amidase [Truepera radiovictrix DSM 17093] Length = 437 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 117/493 (23%), Positives = 210/493 (42%), Gaps = 67/493 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L + ++ + +R+ +++ +V ++++ I N +NA ++++A A A +D+ Sbjct: 4 TDLTTASATKLAEIIRTGQVTSETVVRAHLERIAAVNPSLNAVVQLLADAALEEARRADQ 63 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G L G+P +KD T G+ A P ++T +L GAV+LG Sbjct: 64 RLARGTVLGPLHGVPFTVKDWLETAGVVCTAGDERYRRHVPKEDATAVARLRAAGAVLLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ + YG +P++ ++P GSS G +A +A +G+D+ Sbjct: 124 KTNV-------MAQNPVYGRTHNPYKL-----GYSPAGSSSGEAALIAAGGSPLGLGSDS 171 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRDSAILLKAIA 236 GGSIRQPA G G+KPT GR G + +++ G + R V D A+ L ++ Sbjct: 172 GGSIRQPAHNCGIAGLKPTTGRVPLTGHLPRISAMNDPRTAVGPMARFVEDLALALPILS 231 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G D DA+ + +P+ D L+ ++ + V + E+ +P ++ L AG Sbjct: 232 GPDWRDASALPVPLGD---PLEVTLPELRVAVYTEHEGASPTPETAAAVRRAAEALAGAG 288 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + E P + A Y R R + E +E Sbjct: 289 LDVEERIPPRVEEA------------------YAITRDYWRRPESESWERWEPD------ 324 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 G LSS + H ++R + F DVILTP A P Sbjct: 325 ---------GEATLSSEAVERHLFAWDRLRRALI-----GFMARFDVILTPAAERPAAPH 370 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G+ E +T+ ++ G P V A + +P+G+Q++ +P+R++ +V Sbjct: 371 GEPEGGI---------PYTLPYSLTGYPCAVVRAGTSPEGLPIGVQVVARPWRDDVALAV 421 Query: 477 GQIIEKEAGYFRP 489 +++ G +RP Sbjct: 422 AYELQRALGGWRP 434 >gi|163787981|ref|ZP_02182427.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Flavobacteriales bacterium ALC-1] gi|159876301|gb|EDP70359.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Flavobacteriales bacterium ALC-1] Length = 552 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 125/426 (29%), Positives = 203/426 (47%), Gaps = 61/426 (14%) Query: 73 GIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM-- 129 G+PI +KD + T A + +L D F ++ + KL N A++LGK N+ E+A Sbjct: 160 GMPILLKDNVNASNMATTAGAVVLKDNFTE--DAFIVNKLKSNEALILGKANLSEWAYFF 217 Query: 130 ---GSSNETSYYGPVISPW--RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S ++ G ++P+ R +D+ GSS GS +VA CAA+IG++T GSI Sbjct: 218 CGDCPSGYSAVGGQTLNPYGRRIIDTG------GSSSGSGVSVAANFCAAAIGSETSGSI 271 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PAS TVG+KPT G SR GI+ + +LD AG IT+TVRD+AI+L AI GYD+ D Sbjct: 272 LSPASQNSTVGLKPTIGLVSRSGIVPISSTLDTAGPITKTVRDNAIVLDAIYGYDKSDLK 331 Query: 245 CVNLPVPD--YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 ++ YE+ ++++G G PK D L + + +K GA+IVEI Sbjct: 332 SLDTKKSQAYYEKPSLEALKGKRFGAPKRLLKDTL-------YINALKVIKSQGAEIVEI 384 Query: 303 SLPHTQYALPAYYIISPAEASSNL----ARYDGVRYGLRVEGKDIL--EMYENTRSIGFG 356 Q LP + + + ++L Y GLR DI+ + ++ +++ +G Sbjct: 385 D--EEQLGLPNFLSLLNLDMKTDLPIYMESYANKNIGLRTVS-DIMAFNLKDSIKTMPYG 441 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 Q + I+ + D+ YL +I+ + + + F+ P+ Sbjct: 442 QNLFKGIV-------NDKGDAEYL--ERIKDTLSINGKQYFDN---------------PM 477 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 K N G + N+ +A PA++VP + +P GL IG+ +E+ L Sbjct: 478 -KTHNLDGFLS--INNYHAGFAAVAEYPALTVPMGYTGEGVPKGLTFIGKRLQEKQLLEW 534 Query: 477 GQIIEK 482 + E+ Sbjct: 535 AYVYEQ 540 >gi|298290657|ref|YP_003692596.1| amidohydrolase, AtzE family [Starkeya novella DSM 506] gi|296927168|gb|ADH87977.1| amidohydrolase, AtzE family [Starkeya novella DSM 506] Length = 469 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 144/490 (29%), Positives = 217/490 (44%), Gaps = 64/490 (13%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPI 76 S +SA + ++ + I + +NA+ +V ++A A A+ D G A L G+P Sbjct: 24 SGKVSARAVAEAALHRIAGVDPVLNAFTDVTTERALAEADAIDAARAAGRALGPLAGVPF 83 Query: 77 GIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +K+ F KG+ T A S I P ++T+ ++L GAV LG L+M E+A + E Sbjct: 84 AVKNLFDLKGLPTLAGSKINRDRPPAARDATLVERLSAAGAVCLGGLSMGEYAYDFTGEN 143 Query: 136 SYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G RS + D + GGSSGGS AAV G L S+G+DT GSIR P+SF G Sbjct: 144 LHDG------RSANPHDPEHMTGGSSGGSGAAVGGKLVPFSLGSDTNGSIRVPSSFCGIF 197 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR SR F SLD G R V D A A+ G D D + P Sbjct: 198 GLKPTYGRLSRARSFPFVASLDHLGPFARHVGDLAATYDALVGLDPDDPAQADRPAAPTL 257 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTW--QQGISWLKDAGAKIVE-------ISLP 305 LD P + R+ L W +QG +A A+ + + LP Sbjct: 258 PTLDA---------PGDLRVAVLG-----GWFARQGTPQAYEAVARAAKALGATRTVDLP 303 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEVKHRIM 364 + A A YII+ AE ++ L M + G F V+ R++ Sbjct: 304 EVERARAAAYIITMAEGAA-------------------LHMERLRQRPGDFDPAVRERLL 344 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---- 420 G + + RA+ R + E F + DV++ P TP A P G ++ Sbjct: 345 AGAVLPGAWVQ-----RAQIFRRWFRERALELFAEW-DVLIAPATPVPA-PRGGQKTFVL 397 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + ++T ++ GLP + P E ++P+ +QLI P+RE+ +++ Sbjct: 398 DGREMLVRPNIGIYTQPISFIGLPVAAAPIPTGE-RLPIAVQLIATPWREDVALRAARVL 456 Query: 481 EKEAGYFRPH 490 EK F P Sbjct: 457 EKAGVAFAPE 466 >gi|145595924|ref|YP_001160221.1| amidase [Salinispora tropica CNB-440] gi|145305261|gb|ABP55843.1| Amidase [Salinispora tropica CNB-440] Length = 499 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 134/498 (26%), Positives = 206/498 (41%), Gaps = 46/498 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL ++ +E ++R+ +S+ E+V ++++ I N +NA V+ ++A AAA+ D Sbjct: 23 MPELWMLSATELARQIRTGQVSSREVVQAHLRRINEINPVVNALTAVLDEQALAAADAVD 82 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + G+ L GIP+ +K+ G TQ + + D + + L GA+ Sbjct: 83 QALRYGEEPGPLCGIPMTVKENIDVAGSATTQGIAALRDAIATQDAPHIAE-LRAAGAIP 141 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 + + NM EF M +G +PW + + TPGGSSGG + AVA L +GT Sbjct: 142 IARTNMPEFGMRWHTTNGLHGATRNPWSA-----EHTPGGSSGGDAVAVATGLAPLGLGT 196 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCS-----RLGIISFAPSLDQAGIITRTVRDSAILLK 233 D GS+R PA G +KP+ GR + R +F L G I R V D + Sbjct: 197 DGAGSLRWPAQCCGVAALKPSLGRVAQSDGRRPTPFAFQ-LLGVHGPIARHVDDLRLAFT 255 Query: 234 AIAGYDECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 I D D +P+ P R + S+ GI + P + Q+ Sbjct: 256 HICASDGGDPWHAPVPLNGPPVSRPIRVSMVTAPGGI-------DIHPAVRHALQRAADL 308 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L DAG I E P + A Y I +A Y RV+ K E Sbjct: 309 LTDAGYVIEECDAPALERAGEIYTQI--------MASYG------RVQRKQ--PPVETVA 352 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S F + I T +D RA I R +++ F + ++L P Sbjct: 353 SDDFARFWHVYEPIWTRAQGEPAFDPMMERA-----AIARVWSDWFGR-TPLVLAPIRTQ 406 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 AF LG + + VAVN+ GLPA+++P + +P +Q+I FRE+ Sbjct: 407 PAFVLGCDLDPVCLSDFPATMRLAVAVNLLGLPAVAIPTGETD-GLPHAVQVIAPRFRED 465 Query: 472 TLFSVGQIIEKEAGYFRP 489 IE F P Sbjct: 466 LCLDAAAAIEARIPPFTP 483 >gi|39966653|ref|XP_365216.1| hypothetical protein MGG_01918 [Magnaporthe oryzae 70-15] gi|145009586|gb|EDJ94242.1| hypothetical protein MGG_01918 [Magnaporthe oryzae 70-15] Length = 528 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 116/440 (26%), Positives = 192/440 (43%), Gaps = 50/440 (11%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KDC A G+ S L + P ++TV +L + GA +LG + F +++ T Sbjct: 107 VCLKDCIAVAGVPQFFGSDALPPWTPSTDATVVTRLLEAGADILGTSTCEHFCNSTASFT 166 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S G + +P ++ GGS+ G +A VAG IGTD GGSIR P++ G VG Sbjct: 167 SAQGTIDNP-----HAVGYSAGGSTSGGTALVAGGSVDICIGTDQGGSIRVPSALCGCVG 221 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KPT+G G + D AG I R+V D A L IAGYDE D + P Sbjct: 222 LKPTHGLVPFTGFSTGDAIDDHAGPIARSVEDVAACLDVIAGYDEIDDRSLGAGRPGTFN 281 Query: 256 AL---------DQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 L D+ + G+TVG+ KE + + P + L+ GA + ++S+P Sbjct: 282 FLETLRSTTSSDKPLAGVTVGLVKEGFECSVMRPEVASMVLAAAHKLEQLGASLEQVSIP 341 Query: 306 ---------HTQYALPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 Q + Y ++ A L + + L + +M+ +T Sbjct: 342 LHLEGPSVWTIQQRIAGYLAVMGKATGRRGLGLTEFEQARLPWTDDNFQKMFHST----- 396 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 K+ ++ G Y+ + Y + I I+ + + + DV++ PTTP A Sbjct: 397 ----KNTVINGMYLADK--FPGLYGKVVNIGRQIRDAYQDVLAK-YDVLVMPTTPFVAPR 449 Query: 416 LGKE----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------KMPLGLQLIG 465 G E+ ++G N T N+ G PA+++P + ++P+G+Q++ Sbjct: 450 HGTRDSVLESFEPTIGLTSN---TAVFNVTGHPALTIPVGVLPAADNATVELPVGMQIVS 506 Query: 466 QPFREETLFSVGQIIEKEAG 485 + E + VG+ EK G Sbjct: 507 GLWEESKVLRVGRSWEKAFG 526 >gi|226226753|ref|YP_002760859.1| putative amidase [Gemmatimonas aurantiaca T-27] gi|226089944|dbj|BAH38389.1| putative amidase [Gemmatimonas aurantiaca T-27] Length = 579 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 12/271 (4%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L F+ ++++ I++ ++ D Y++ ++ N Q+N + ++ ARA A+ D + Sbjct: 103 LAFLPAHRISALIKARRITSRQITDIYLERLKRLNPQLNCVVTLMETSARAEADAMDAEL 162 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L G+P GIKD FATKG+ T S Y++ + +L + GAV+L KL Sbjct: 163 KAGKDRGPLHGVPYGIKDLFATKGVPTSWGSPDFKDQVFDYDAEIVTRLRNGGAVLLAKL 222 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + +A N+ Y G +PW GSS G +A A A +IGT+T G Sbjct: 223 STGLYA---QNDWWYGGRTNNPWNL-----NIGASGSSAGPGSATAAGCVAFAIGTETQG 274 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI P+ G ++PTYGR SR G + + S D+ G + RT D A++ + G D D Sbjct: 275 SIVSPSIRNGISALRPTYGRVSRHGGMVLSWSQDRVGPMCRTAEDCAMVFNVLHGVDPKD 334 Query: 243 ATCVNLPVPDYERALD-QSIQ-GMTVGIPKE 271 ++ V P +++R + S++ G+ PKE Sbjct: 335 SSTVTTPF-NFDRNIKLASLRIGVDAAAPKE 364 >gi|307729756|ref|YP_003906980.1| Amidase [Burkholderia sp. CCGE1003] gi|307584291|gb|ADN57689.1| Amidase [Burkholderia sp. CCGE1003] Length = 513 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 144/516 (27%), Positives = 216/516 (41%), Gaps = 53/516 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V + R+ ++A +L + IE N++ NA I + Q A A + D R Sbjct: 10 DLDALTVQAVQAAFRAGTLTAEQLTRACFDRIERDNAKYNALIFLNPQ-AIDDARKIDAR 68 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNG 115 G+A L G+P+ IKD G T A L P ++ V ++ G Sbjct: 69 RAAGEALGPLAGVPVVIKDPMDMVGFPTTAGWARLYSKKGGVDLMPERDAPVVARMRRAG 128 Query: 116 AVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 A++LGK N+ + GS S+ GP I+ + D+ PGGSS G+++AVA + Sbjct: 129 AILLGKTNVPILSHTGSHANDSWAGPTIN----VAMPDR-VPGGSSAGTASAVASGMAVL 183 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + +TGGSI+ PAS G VGIKPT G G++ + + D G I R VRD+A+ L Sbjct: 184 GLAEETGGSIQNPASAQGLVGIKPTIGLVPNAGVVPLSGNRDVVGPIARNVRDAALCLDV 243 Query: 235 IAGYDECD----ATCVNLPVPDYERALD-QSIQGMTVGI-PKEYRLDYLSPTIDKTWQQG 288 +AGY D A+ P Y ALD ++ G +G+ +R LS +++ Sbjct: 244 LAGYSSEDPKTLASVGQQPQGGYTSALDANALSGKRIGLYGPGWRAQPLSDEAATLYERV 303 Query: 289 ISWLKDAGAKIVEISLPHTQYA--------LPAYYIISPAEASSNLARYDGVRYGLRVEG 340 L GA++V+ + +A L + +L +Y R G Sbjct: 304 KEELTALGAELVDDPFAGSGFADLRKPTPPLEHFDARGLESIPYDLEKYL-QRLGKHAPL 362 Query: 341 KDILEMYENTR-SIGFGQE---------VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 K E E TR FG R + L + L+AR +R Sbjct: 363 KTFAEFAEATRDDDAFGPNGVLRYLHNLADFRTALADPSLPPEMPEFIELKARYLRIF-- 420 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPL-GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 T Q +D ++ P PL G E ++G I N+AGLP I VP Sbjct: 421 --ETVMTSQRLDALVFPQMRCEIPPLHGTEVIQETTVGEI---------NIAGLPGIVVP 469 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 A P GL +G+ + E L E AG Sbjct: 470 AGRYLSGAPFGLIFVGRQWDEAALLGYAYAYETGAG 505 >gi|320592317|gb|EFX04756.1| amidase [Grosmannia clavigera kw1407] Length = 539 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 127/477 (26%), Positives = 212/477 (44%), Gaps = 50/477 (10%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 + + +A+ + R A ES R L G + +KDC A G+ + Sbjct: 76 LPDEQEHGHAWAHRFLIRGRREASESSVR-----KPALAGWRVCVKDCIAVAGVPQFYGT 130 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 + P ++TV Q++ + G + G + F +S+ TS G V +P + S+ Sbjct: 131 DAFGPWTPSTDATVVQRVLEAGGDIHGTATCEHFCNSTSSFTSAQGTVENPHQIGYSSGG 190 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 S+ G +A VAG ++GTD GGSIR PA+ G VG+KPT+G GI S P Sbjct: 191 -----STSGGAALVAGGQMDLALGTDQGGSIRVPAALCGCVGLKPTHGLVPFSGITSGDP 245 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ----------SIQG 263 D AG I+RTV ++A+ L +AGYD D + V D + G Sbjct: 246 VDDHAGPISRTVLETAVCLDVLAGYDGLDDRALGAQVHGSYGFADTLLRTTAASAGRLDG 305 Query: 264 MTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 +G + + Y +D + P + + + + L GA + ++S+P + PA + + + Sbjct: 306 FRIGRLVEGYDIDIVQPGVRQRFLDATAQLTALGAVVEDVSVPLHRLG-PAVWTLQ--QR 362 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTR----SIGFGQ---EVKHRIMIGTYVLSSRCY 375 S A G YG R G + E +E R + FG+ K+ ++ G Y+ + + Sbjct: 363 MSGAAGLLGRAYGRR--GLHLTE-FEQARLPWTDLSFGRLFPSTKNTLINGLYLADN--F 417 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN----SGSMGHIYN 431 Y + + I + + + DVI+ PTTP A G + S+G N Sbjct: 418 PGLYAKTMNVARQIGDVYADQL-RSFDVIVMPTTPAVAPRHGHRRSVLSCFEPSIGLTTN 476 Query: 432 DVFTVAVNMAGLPAISVPAALCEK------KMPLGLQLIGQPFREETLFSVGQIIEK 482 T N+ G PA+++P E ++P+G+Q++G ++E + +VG EK Sbjct: 477 ---TAVFNVTGQPALTIPIGWAEAVDNAAVQLPVGVQIVGGLWQEHKILAVGHAWEK 530 >gi|254487549|ref|ZP_05100754.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseobacter sp. GAI101] gi|214044418|gb|EEB85056.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseobacter sp. GAI101] Length = 446 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 136/482 (28%), Positives = 218/482 (45%), Gaps = 54/482 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 + +E+ S +++VELV S + I ++ + A+ + + A A A+E D+ R Sbjct: 8 LTATEALALCASGKLTSVELVKSCLAQITATDDAIRAWAYLDQEAAIAQAQECDRIRRAG 67 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIP+G+KD T + T + I G + +++ + + L GAV++GK Sbjct: 68 MTIGALHGIPVGLKDIIDTADMPTARGTPIFAGRQTDHDARLVELLRGAGAVIMGKTVTT 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A +N+T R+ + D +PGGSS GS+AAV +IGT T GS+ Sbjct: 128 EMAFVHANDT----------RNPHNPDH-SPGGSSSGSAAAVGAHHVPLAIGTQTNGSVI 176 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +PASF GT G KPT G SR G++ + SLDQ G R++ D A+L I GYD DAT Sbjct: 177 RPASFCGTFGFKPTRGVVSRTGLLQTSVSLDQVGCFGRSLADVALLTDVIGGYDGSDATS 236 Query: 246 VNLPVPDYE--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P PD A D + V + D LS Q+G+ ++EI Sbjct: 237 FARPRPDMSAGAAEDAPVTPELVWFDLPFN-DRLS----ADAQEGLE-------AVLEIL 284 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGV--RYGLRVEGKDILEMYENTRSIGFGQEVKH 361 P + PA+ SNL Y + ++ E + + S + +K Sbjct: 285 DPQVTR-------MEPADTLSNLVAVQARIHEYEICQHQAEVFEGHWDQIS----ETLKP 333 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 I G + + D+ ++A F + F D I+ P+ A G Sbjct: 334 VITRGNQITRAEYEDALAVKAS------AEAFFDNFFVEFDAIIAPSAAGEAPKFG---- 383 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G+ I+ ++T +AGLP IS+P + E +P+G+QLIG ++ L + ++ Sbjct: 384 -AGTGDPIFCTLWT----LAGLPCISLPLLVGETGLPIGVQLIGPAEKDNRLLRTARWLQ 438 Query: 482 KE 483 + Sbjct: 439 TQ 440 >gi|21328687|gb|AAM48693.1| amidase family protein [uncultured marine proteobacterium] Length = 479 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 136/486 (27%), Positives = 210/486 (43%), Gaps = 60/486 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+++ IS+ +L+D+ + I + +NA + +ARA S G L G+P Sbjct: 24 LKARKISSSDLIDAALTRIAQTGPLINATPTLCEARARAVDLSSRDSTPAGW---LAGLP 80 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I IKD A + T + L GF P + +L GAV+LGK N EF G + Sbjct: 81 ITIKDLNAVADVRTTFGTKGLAGFIPQKSDPLVDQLEQRGAVILGKTNTPEFGAGGNTFN 140 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +G +PW + PGGSSGG++A++A S G+D GGS+R PA++ G VG Sbjct: 141 DVFGQTRNPWNT-----ALNPGGSSGGAAASLAAGEIWLSHGSDHGGSLRTPAAYCGIVG 195 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGII-------TRTVRDSAILLKAIAGYDECDATCVNL 248 ++P+ G I+ P D A II R+VRD A+ L A++G+D A Sbjct: 196 LRPSPG-------IAGGPGQDAAFIIEGVQGPMARSVRDCALFLDAMSGFDPQIAISYPA 248 Query: 249 PVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI--SLP 305 P Y+ A+ ++ + + P + P + + + L+ GA+I E L Sbjct: 249 PEISYQEAVIRTDGKLKIAFAPDLGGFGQVDPEMAQHLAAAMRQLEKNGARIEETCPDLT 308 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 H + + + A A+ L + V+ + ENT FGQ + +I Sbjct: 309 HLERSYHTLRGLMWATAAKRLPQ--------EVQAHFKSTLAENT---AFGQALTLEDII 357 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 A R+++ + FE DV+ PT P E Sbjct: 358 ---------------DANLNRSILFNNMLSLFET-FDVLACPT--VGCMPHSASEEWVHH 399 Query: 426 MGHI----YND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +G + Y D F GLPAISVP + +P+GLQLIG+P E L + + Sbjct: 400 VGGVELTNYMDWLRFAFLATTTGLPAISVPVGRGPRGLPVGLQLIGKPRGEAALLAAARH 459 Query: 480 IEKEAG 485 +E G Sbjct: 460 VELTFG 465 >gi|119468752|ref|ZP_01611804.1| amidase [Alteromonadales bacterium TW-7] gi|119447808|gb|EAW29074.1| amidase [Alteromonadales bacterium TW-7] Length = 516 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 131/494 (26%), Positives = 222/494 (44%), Gaps = 36/494 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L + E ++ I+A +L YI+ I N Q NA I + A A++ D+ Sbjct: 36 SALELKTIDEIHSAYKNNTITAQQLAQGYIKRINQLNPQFNAVINI-EPTAITQAKKIDE 94 Query: 62 RIINGD-ARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G A L GIP+ +KD T G + T A S L + ++ V ++L + GA++L Sbjct: 95 LSAQGLWAGPLHGIPVLLKDNIETTGSLPTTAGSLALKNNITNNDAFVVKQLRNAGAIIL 154 Query: 120 GKLNMDEFAMGSSNETSYYGPVI--SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 GK N+ E+A S+ +S + + D+T P GSS GS+ A+A ++G Sbjct: 155 GKTNLSEWANFRSSYSSSGWSAVGGQTHNAYDTTRN--PCGSSSGSAVAIALNFAPVALG 212 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PAS G IKP+ G+ SR G++ + S D G + +++D+ ++L + G Sbjct: 213 TETDGSITCPASVNGVYAIKPSMGQVSRSGVVPLSSSQDSVGPMAHSLKDARLVLSVLQG 272 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D + + + + S + +G +P D + + +++ +S LK AG Sbjct: 273 RDPLDTSTHSFELQAQYKVTKSS---LVIGALPS----DKFTVETQRLYKKQLSALKQAG 325 Query: 297 AKIVEISLPHTQYAL--PAYYIIS---PAEASSNLARY-DGVRYGLRVEGKDILEMYENT 350 +V I + L YY++ E + LA D V+ D + + Sbjct: 326 HTVVNIDISDDLATLFVDEYYVLLYDFNKEINQYLANTSDQVKVKSLSALIDFNKQNKAA 385 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTT 409 + FGQ+ I+I + D + + RTL T ++ VDV++ PTT Sbjct: 386 EMLHFGQD----ILIQANAVDLTQTDKYQKTKHRYRTLATAAITNLYKNNNVDVVIAPTT 441 Query: 410 -PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P L +N GS + +AG I++PA +P+GL +I Sbjct: 442 SPAWKTDLVNGDNFKGSSSSLS--------AIAGTTHITLPAGQVS-GLPVGLSIIANKN 492 Query: 469 REETLFSVGQIIEK 482 + + ++ QII++ Sbjct: 493 QPQAAYTHAQIIDE 506 >gi|310820212|ref|YP_003952570.1| amidase family protein [Stigmatella aurantiaca DW4/3-1] gi|309393284|gb|ADO70743.1| Amidase family protein [Stigmatella aurantiaca DW4/3-1] Length = 604 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 127/488 (26%), Positives = 220/488 (45%), Gaps = 43/488 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F V+ + S+ +S+ L Y++ + + Q+ I + + A A +D Sbjct: 146 DIAFAPVTALSRWIESRALSSERLTSLYLERLRRLDPQLKCVITLTPELALQQARRADAE 205 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP G KD T GI T + P ++T +L GAV++ K Sbjct: 206 IAAGRYRGPLHGIPWGAKDLVDTAGIATTYGAEPFRNRIPSEDATAVARLHQAGAVLVAK 265 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL--CAA-SIGT 178 L++ A+ N+ + G +PW F G+SG S+ A C S+G+ Sbjct: 266 LSLGALAL---NDIWFGGQTKNPW--------FLDEGASGSSAGPGAATAAGCVGFSLGS 314 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +TGGSI P+ G G++PT+GR R G ++ SLD+ G +TRTV DS ++L A++G Sbjct: 315 ETGGSIISPSMRCGITGLRPTFGRVPRTGAMTLCWSLDKLGPMTRTVEDSLLVLSALSGP 374 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D V + D++ ++G+ VG + + +D+ + LK G K Sbjct: 375 DAGDVASVPSKL-DFDAT--AGVKGLRVGYVPAWMEQSPATEVDRA---ALETLKQLGLK 428 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 V + LP Y+ + ++I AEA++ + +G+ + + + N F Q Sbjct: 429 PVAVQLPDWPYS--SLHVILFAEAAAAFEELT-LSHGVDTMAMQVPDAWPNL----FRQ- 480 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 G ++ + + LR RK+ + R + VDV+L P+ + Sbjct: 481 -------GRFLSAVDMVQADRLR-RKVAGEMARVMAD-----VDVLLVPSLREDILTITN 527 Query: 419 EENN-SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + S ++ + ++ + A P V +++MP G+ LIG+ F E TL VG Sbjct: 528 HTGHPSLTLRTGFIEIDRARSDWAPDPKKPVVPFSPKRRMPHGVTLIGRLFEEGTLGRVG 587 Query: 478 QIIEKEAG 485 +E+ +G Sbjct: 588 MALERASG 595 >gi|167031675|ref|YP_001666906.1| putative amidase [Pseudomonas putida GB-1] gi|166858163|gb|ABY96570.1| Amidase [Pseudomonas putida GB-1] Length = 469 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 139/482 (28%), Positives = 212/482 (43%), Gaps = 36/482 (7%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 F AV E + + + +S VE+VD + I+ N +NAY V + ARAAA S++R Sbjct: 9 EFTAV-ELLELYQRRQLSPVEVVDDVLARIDLHNPAVNAYCHVDGEGARAAARASEQRWQ 67 Query: 65 NGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKL 122 G+ L+GIP IKD T+G+ T+ S G P ++ + + + GAV++GK Sbjct: 68 RGEPCGRLDGIPASIKDLTLTRGMPTRKGSRTTSGAGPWDIDAPFSAFMREAGAVLVGKT 127 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 EF + YG +PW + + T GGSSGG++AA A L G+D GG Sbjct: 128 TTPEFGWKGVTDNPLYGITRNPWDT-----RLTAGGSSGGAAAAAALNLGVLHQGSDAGG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR P +FTGT GIKPT+G + + L G +TRTV D+ ++L +A D D Sbjct: 183 SIRIPCAFTGTFGIKPTFGYVPQWPASAMT-VLSHLGPMTRTVDDAVLMLDCVARPDARD 241 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P Q + G+ + + + P + Q + L GA++ E+ Sbjct: 242 G-LAGAPRQTPWLGQQQDLSGLRIAYSANFGYVQVDPQVQALVAQAVQRLARLGAQVEEV 300 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + P E + L R + + + R I E + Sbjct: 301 D--------PGFS--DPLETFNTLWFAGAARLAGALSEEQRALLDPGLRWIA---EQGAQ 347 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-EN 421 I + Y + L AR LI + AF Q DV+L+P P AF G Sbjct: 348 INLREY--------TQALEARA--ALIAK--MNAFHQRYDVLLSPMLPLVAFEAGHNVPP 395 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 SG + F+ N+ PA SVP + +P+GLQ++ F +E + V ++ E Sbjct: 396 GSGMAQWMEWTPFSYPFNLTQQPAASVPCGFTREGLPVGLQVVAGRFADEQVLRVCKVYE 455 Query: 482 KE 483 + Sbjct: 456 QH 457 >gi|148254039|ref|YP_001238624.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] gi|146406212|gb|ABQ34718.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp. BTAi1] Length = 471 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 113/423 (26%), Positives = 182/423 (43%), Gaps = 41/423 (9%) Query: 67 DARDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +A L GIP +KDC G T AC + P S ++L GA+++GK NMD Sbjct: 71 EALPLWGIPFSVKDCIDAAGFATTSACPGF--SYLPAANSPSVERLLAAGAILIGKTNMD 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 +FA G S YG +P+ + + PGGSS G++ +VA L + ++GTDTGGS R Sbjct: 129 QFATGLVGTRSPYGVARNPFDA-----AYIPGGSSSGAAVSVASGLVSVALGTDTGGSGR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F VG+KPT G S G + S++ I TV D+ + GYD D Sbjct: 184 VPAAFNNIVGLKPTRGLISGAGTVPACRSIETVSIFALTVPDARRVFDVARGYDAHDPFS 243 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL 304 + A ++ + + GIP LD+ + + L ++G V+ S+ Sbjct: 244 RQ-----HALAPEEVVTPIRFGIPDRGSLDFFGDAEAAALFDAAVRRLGESGT--VDSSI 296 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + + S L + L +G + E Y RSI G+ + Sbjct: 297 DYAPF--------------SELNQ-------LLFKGPWLAERYGALRSIVDGRPDALLPV 335 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + R + A + R + + A Q +DV++ PTT T +E + Sbjct: 336 TRAILEGGRSISGAEVFAAQQRCEVLKRQIAALWQRIDVLVVPTTGTI---YRIDEIEAD 392 Query: 425 SMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + Y +T VN+A L A+++PA +P G+ L+ F + L ++ + Sbjct: 393 PLDRNYKLGTYTNFVNLADLAAVAIPAGFRPNGLPFGITLLAPAFSDHRLATIAARVHDA 452 Query: 484 AGY 486 G+ Sbjct: 453 GGW 455 >gi|302532375|ref|ZP_07284717.1| indoleacetamide hydrolase [Streptomyces sp. C] gi|302441270|gb|EFL13086.1| indoleacetamide hydrolase [Streptomyces sp. C] Length = 482 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 138/491 (28%), Positives = 218/491 (44%), Gaps = 46/491 (9%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E +R ++SAVELV S+++ I N +NA +++A +A AA +D+R G+ Sbjct: 20 AEQARAVRGGEVSAVELVQSHLERIAEVNPAVNAVTQLMADRALEAAAATDRRRAAGEPL 79 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P +K+ +G+ T F ++ +L GAV +G NM Sbjct: 80 GPLAGVPFTVKETTPVEGVPTTFGVERFRHFTAAADAPPVARLRAAGAVPIGHSNMPTLI 139 Query: 129 M-GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + G + +G +PW TPGG+SGG +AAVA + A +G D+GGSIR P Sbjct: 140 LAGMHTRSELFGDTSNPWDP-----ARTPGGTSGGDAAAVATGMAALGLGNDSGGSIRVP 194 Query: 188 ASFTGTVGIKPTYGRCSR----LGIISFAPS---LDQAGIITRTVRDSAILLKAIAGYDE 240 A F G G+KPT GR LG P+ L G + R V D + +A+AG D Sbjct: 195 AQFCGVAGLKPTTGRFPADHRVLGPDDPGPASQMLVTDGPLARRVGDLRLAYEALAGADP 254 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V PVP Y L ++ V P + P + L+DAG + Sbjct: 255 RDPRSV--PVPVYGPPLPGPVKVAVVADPGGR---GVHPAVRAAVADAAGALRDAGYDVR 309 Query: 301 EIS-LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E++ +P AL AY I+ E + + + VR L G ++M +E+ Sbjct: 310 EVTDVPRLDEALEAYDRITMTEFAPS---WPAVRTLLGEGGDRYIQMAMEKTPPATAEEL 366 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 ++GT++ R + + +L + L+ FTE P P G E Sbjct: 367 VR--LMGTWLGIRRSW-AEFLDEYPL--LLGPSFTEP----------PVEP------GLE 405 Query: 420 ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + + + A + GLPA++VP L + +P G+Q++G+ FRE+ Q Sbjct: 406 SRDRAGRDRVASGMRLCTATSFTGLPAVAVPTGLYD-GLPGGVQIVGRAFREDLCLDAAQ 464 Query: 479 IIEKEAGYFRP 489 +E G P Sbjct: 465 AVEDRLGVLTP 475 >gi|78046586|ref|YP_362761.1| amidase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035016|emb|CAJ22661.1| putative secreted peptide amidase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 554 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 110/310 (35%), Positives = 156/310 (50%), Gaps = 12/310 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEES 59 +L+ V+ + R+ S S+++L +Y+Q I+ + ++NA IE+ Q A A A Sbjct: 40 DLSEADVAGLQARMASGQSSSLQLTRAYLQRIAGIDRAGPRLNAVIELNPQ-AEADARAL 98 Query: 60 DKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D G R L GIP+ +KD + A S L F P ++ V Q+L GAV+ Sbjct: 99 DAERKAGHVRGPLHGIPVLLKDNIDALPMVNSAGSLALAEFHPARDAFVVQRLRTAGAVI 158 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK N+ E+A S ++S P GSS G+ AA+A L IGT Sbjct: 159 LGKTNLSEWANFRSTQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAASLATVGIGT 218 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI PAS G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA Sbjct: 219 ETDGSITCPASVNGLVGLKPTVGLVSRDGIIPISASQDTAGPMTRSVADAAAVLQAIAAP 278 Query: 239 DECDATCVNLPVP--DYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKD 294 D D P DY L S++G +G+ + R D P I + + L+D Sbjct: 279 DPQDPATAKAPATSVDYLAYLKPDSLRGARLGLLRNPLRED---PAIAAALDRAVRTLRD 335 Query: 295 AGAKIVEISL 304 AGA +VE +L Sbjct: 336 AGATVVETAL 345 >gi|332797954|ref|YP_004459454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Acidianus hospitalis W1] gi|332695689|gb|AEE95156.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Acidianus hospitalis W1] Length = 393 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 135/459 (29%), Positives = 205/459 (44%), Gaps = 85/459 (18%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 +E NS+ +A+I + K R D L+G+ GIKD TKGI T A S Sbjct: 3 LEELNSKYDAFITIDEIKGR-------------DKGKLKGLTFGIKDIILTKGIKTTAGS 49 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 IL + P+ + + K+ + G ++GK N EFA+G++N +S GP +P+ + Sbjct: 50 KILKDYIPNRNAWIVDKILEEGGTIVGKTNTHEFAIGATNTSSIAGPARNPYDP-----E 104 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSSGGS+ AVA + +GTDTGGSIR PAS G +G KPT G G+I F+ Sbjct: 105 RISGGSSGGSAVAVALKMVDVGVGTDTGGSIRIPASLCGVIGFKPTTGIIPIDGVIPFSW 164 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 +LD G ITR +P R LD IP E + Sbjct: 165 TLDTIGFITRD-------------------------IPTLRRVLDAV-------IPIENK 192 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 L + + G+ KD A SL L +Y+ + L +G Sbjct: 193 -HVLVSKVRTRPRLGVFLFKDDPA---SNSLKSILNKLSSYFDL----IDLRLNFLEG-- 242 Query: 334 YGLRVEGKDIL--------EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI 385 +G V G L + E+T + F +VK +M G L R D Y+ A + Sbjct: 243 FGSNVRGTIALAEGSSYHRDWIESTPGMYF-PDVKELLMQG---LQIRAID--YIDALRA 296 Query: 386 RTLIKRDFTEAFEQGVDVILTPTT----PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 R +I ++ AF+ VD I++PTT P + +G+E+ + + N T N+ Sbjct: 297 RRVIFEEYVRAFDS-VDAIISPTTKIPAPKISEVVGREKEYRKLL--VSN---TELFNLV 350 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 P+IS+P + +P+GL + G P+ + + + + I Sbjct: 351 NAPSISLPVSKVN-DLPIGLMVSGLPYEDGIILDIAEKI 388 >gi|302545141|ref|ZP_07297483.1| amidase [Streptomyces hygroscopicus ATCC 53653] gi|302462759|gb|EFL25852.1| amidase [Streptomyces himastatinicus ATCC 53653] Length = 456 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 140/487 (28%), Positives = 210/487 (43%), Gaps = 38/487 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ + + +R S D+S VE + + IE +NAY V ++A AEES Sbjct: 1 MTDLHDLTAVQLLERYGSGDLSPVEATRAALDRIEQIQPSVNAYSRVDGEEALRQAEESA 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVM 118 +R G+ A L+G+P+ +KD +G T S + P E + ++ D+GAV Sbjct: 61 ERWRRGEPAGLLDGVPVSVKDILLMRGGPTLRGSRTVRTEGPWDEDAPAVARMRDHGAVF 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK EF + G +P+ T GGSSGGS+AAVA S+GT Sbjct: 121 LGKTTTPEFGWKGVTDNPVDGVTGNPYDP-----GRTAGGSSGGSAAAVALGAGPLSLGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PASF G +KPTYGR +F +L G +TR DSA+L+ I G Sbjct: 176 DGGGSVRIPASFCGIFALKPTYGRVPIYPASAFG-TLAHVGPMTRDAADSALLMDVITGP 234 Query: 239 DECDATCVNLPVPDYERALDQ---SIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKD 294 D D + + + A+ SI G+ V P + P + ++ + L Sbjct: 235 DWRDWSQLGPLGGTFRDAISAGGGSIDGLRVAYSPTMGGAATVDPEVAAAVRRAVDLLAG 294 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA + EI P I P EA L + G ++ G++ E+ + Sbjct: 295 LGAVVEEID--------PG--IEDPVEAFHTL-WFSGAARVVQPLGQEQWELLDPGLREV 343 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 Q + + YL A +R + F D+++TPT P +AF Sbjct: 344 CAQGAAYSAL-------------DYLAAVDVRMALGHAMGR-FHSAYDLLVTPTLPITAF 389 Query: 415 PLGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G E SG FT NM PA SVP + +P+G+QL+G + + Sbjct: 390 EAGVEVPEGSGHTRWTGWTPFTYPFNMTQQPAASVPCGVSGAGLPIGVQLVGARHADAVV 449 Query: 474 FSVGQII 480 V + Sbjct: 450 LRVAHAL 456 >gi|291008162|ref|ZP_06566135.1| amidase [Saccharopolyspora erythraea NRRL 2338] Length = 469 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 140/496 (28%), Positives = 222/496 (44%), Gaps = 47/496 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+ +++VEL D I IE + +NA +ARAAA +D+ G+ R L GIP Sbjct: 1 MRAGAVTSVELTDEAIARIERDDEVINAICVPDFDRARAAAHRADQARARGEDRPLLGIP 60 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +K+ + G+ T + P ++ +L GAV+LGK N+ + Sbjct: 61 VTVKESYNIAGLPTTWGMPPHRNYMPAEDAVQVSRLKAAGAVVLGKTNVPLGLQDVQSFN 120 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 YG +PW D+ TPGGSSGGS+AA+A A SIG+D GS+R PA F G Sbjct: 121 EIYGTTTNPW----DHDR-TPGGSSGGSAAALASGFGALSIGSDIAGSLRTPAHFCGVYA 175 Query: 196 IKPTYGRCSRLGII-----SFAPSLDQA--GIITRTVRDSAILLKAIAGYDECD---ATC 245 KPT G + G++ + LD A G + RT RD +LL +AG D A Sbjct: 176 HKPTLGLAANRGMVPPSEPALPADLDLAVVGPMARTARDLTLLLDVMAGPDPLTFGVAHR 235 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS-- 303 + LP +ER D V + E+ L + + + L D GA++ S Sbjct: 236 LALPPARHERLCD-----FRVLVLDEHPLIPTGSAVRAGVNRVAAALVDGGARVERHSPL 290 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 LP Y + S ++AR+ +E +E R+ G + Sbjct: 291 LPGLTEGATLYMRLL---ISGSVARFP-------------IESHEQLRTRAAGLSADDQS 334 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN-- 421 + + + ++ A R L + + + F + D ++ P TPT AFP N Sbjct: 335 LDAVRLRAMVSSHRDWIEANNRRELHRHSWRQLFAE-FDAVVCPITPTPAFPHDHNPNPL 393 Query: 422 ----NSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + + Y D V+ M GLPA ++PA + +P+G+QLIG F + T Sbjct: 394 ERRIDIDGVEYPYFDQLVWAGLATMPGLPATAIPAGRSPEGLPVGVQLIGPMFEDRTPLR 453 Query: 476 VGQIIEKEAGYFRPHK 491 + +++E++ G F+ K Sbjct: 454 LAELLEQKTGGFQAPK 469 >gi|254423488|ref|ZP_05037206.1| Amidase, putative [Synechococcus sp. PCC 7335] gi|196190977|gb|EDX85941.1| Amidase, putative [Synechococcus sp. PCC 7335] Length = 464 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 139/489 (28%), Positives = 214/489 (43%), Gaps = 63/489 (12%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAY----IEVVAQKARA---AAE 57 N++ + +LR ++ +L+ S I I +SQ++A+ I++ Q A+ A E Sbjct: 6 NWLTLKILTKQLREGRLTVTQLLQSCIHRINQHDSQVHAWEHLDIQLALQLAKGLDRAIE 65 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDN 114 SD+ + L GIPIG+KD FAT + T +D +R Y E+ V +L Sbjct: 66 RSDETPPSQIVSSLFGIPIGVKDIFATLDMPT---GWGMDIYRDRYLDHEAAVVSRLKAA 122 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GA++LG E A T+ GP +P + TPGGSS GS+AAVA + Sbjct: 123 GAIILGNTVTTELA------TAAAGPTANPHHL-----QHTPGGSSSGSAAAVADGMVPL 171 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 +IG+ T GSI +PA++ G G KP++G SR G++ LD GI R + D ILL Sbjct: 172 AIGSQTMGSILRPAAYCGIFGFKPSFGLISRYGMMPVCQELDHVGIFARGITDLQILLTV 231 Query: 235 IAGYDECDA-TCVNLPVPDYER----ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 + G D D + + P E A + +G + Q + Sbjct: 232 LVGPDRRDPDSWLGEPFGTIESTSKLAQHHHSSCLRIGFVSTPYWNQAEKVTQVRLHQAM 291 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 S L+ AG + E+SLP + + + L + G V G IL+ + Sbjct: 292 SKLQQAGINVEEVSLPR---EFDRAWEVVQTLCAYGLHKEHGSHLPTNV-GSPILQTW-- 345 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + GQ V D++Y +A + R ++ F Q D +L+P T Sbjct: 346 ---LQRGQAVS---------------DANYRQACQYRDRYRQLLQPIFAQ-YDALLSPVT 386 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 A P G N+GS VF ++ GLPA+++P E +PLG QLIG + Sbjct: 387 LGPA-PFGL--TNTGS------PVFCGLWSLCGLPALNLPLGQTESGLPLGAQLIGPLYA 437 Query: 470 EETLFSVGQ 478 + L + Sbjct: 438 DRELLKAAE 446 >gi|158424202|ref|YP_001525494.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331091|dbj|BAF88576.1| amidase [Azorhizobium caulinodans ORS 571] Length = 495 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 132/505 (26%), Positives = 215/505 (42%), Gaps = 48/505 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L F + + + LR D+++ L++ Y+ IE N +NA I + A+ ARA A+ +D Sbjct: 16 LAFASAIDLLEALRRGDVTSRALLELYLGRIERHNPALNAVIFLEAEAARARADAADAAR 75 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G++ L G+P+ +K+ G T FRP V Q+L D GA++ GK Sbjct: 76 ARGESWGPLHGLPMTVKESHHIAGWPTTWGDPATADFRPEATGVVVQRLLDAGAIVFGKT 135 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ + + + +G +PWR TPGGSSGGS+ A+A AA +G+D GG Sbjct: 136 NVPIHLLDWQSYNAIHGTTHNPWRR-----GVTPGGSSGGSAVALAAGFTAAELGSDAGG 190 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGI----ISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 S+R PA F G G +P+ + G + + +G + R+ D +LL +AG Sbjct: 191 SVRMPAHFCGVFGHRPSIHVVPQAGNDRPGSTIGNEVSTSGPMARSAGDLDLLLGILAGP 250 Query: 239 DECDATC--VNLPVPDYERALDQSIQ---GMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 DA + LP P + D + G ++ E L +++ +G++ Sbjct: 251 AGPDAIAWRLELPEPRARKLTDFRVAVLYGSSIAEVDEAYASRLRALVERLRAEGVNVND 310 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRS 352 +A + H + + A A A D L+ D + E+ R+ Sbjct: 311 NARPDFDDAEHHHVLLQV----LRGAASARPPQAAVDAALARLKTTAADDHSYVAESDRA 366 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + HR +G ++ R I+R + FE DV+L P T + Sbjct: 367 L----TQSHRAWLGI---------------QERRAAIQRAWASFFES-YDVLLAPATTGA 406 Query: 413 AFPLGKEENNSGSMGHI------YNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLI 464 AFPL ++ I YND A +AGLPA P +P+G+Q++ Sbjct: 407 AFPLDEDRPREARTLTINGRQADYNDQLFWAGIATLAGLPASVAPIGETADGLPVGVQIV 466 Query: 465 GQPFREETLFSVGQIIEKEAGYFRP 489 G + T + +E G+ RP Sbjct: 467 GPYLEDRTPIAFAAALEALYGFRRP 491 >gi|170746679|ref|YP_001752939.1| amidase [Methylobacterium radiotolerans JCM 2831] gi|170653201|gb|ACB22256.1| Amidase [Methylobacterium radiotolerans JCM 2831] Length = 498 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 139/483 (28%), Positives = 228/483 (47%), Gaps = 52/483 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L M+ + R + D+S VEL+DS + I N +NA + + ++ARAAA ++ Sbjct: 1 MTDLCDMSAVDLRRLIGRGDVSPVELMDSCLDRIARINPAVNAVVALDTERARAAARRAE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G+ L GIP+GIKD T G+ T S I P + V +L + GA++L Sbjct: 61 AAVRVGEPLGPLHGIPVGIKDTEDTAGLRTTYGSPIHADNVPARDLGVVARLREAGAIVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K N EFA G++ + YG + + D T + G S G + A G + AS G+D Sbjct: 121 AKTNTPEFAAGANTRNTVYG---ATGNAFDPT-RSAAGSSGGSAVALACGMVPLAS-GSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRC--SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TGGS+R PA++ G VG++P+ G R G+ +A +L G + RTV D+A++L A+A Sbjct: 176 TGGSLRNPAAYAGIVGMRPSSGLVPNERRGL-GWA-NLPVNGPMARTVGDAALMLGAMAN 233 Query: 238 YDECDATCVNLPVP---------DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 D D LP D RALD + + V +++ + + ++ Sbjct: 234 DDPRDPLAYTLPGEPVRGRADRYDPHRALD--LGALRVAFTEDFGFAPTEQHVRRVFRHR 291 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 ++ L A E + P A A+ I+ A+ LA + L+ Y Sbjct: 292 VASLSPLFAT-AETATPDCAGADEAFAIL---RAAQFLALH--------------LDNYR 333 Query: 349 NTRSIGFGQEVKHRIMIGT-YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 TR G V+ + G Y L+ Y RA ++T I R F + F + D++++P Sbjct: 334 -TRPHLLGPNVRTNVEEGLGYTLAD------YARAASVQTAIYRTFVDFFRR-YDLLISP 385 Query: 408 TTPTSAFPLGK----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 T S P + E + + + + + V +AG PAIS+P + E +P G+Q+ Sbjct: 386 TITLSPRPWTELYPTEIDGAATRSYFHWLALAYGVTLAGHPAISLPLGVDEAGLPFGVQV 445 Query: 464 IGQ 466 + + Sbjct: 446 VAR 448 >gi|189207741|ref|XP_001940204.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976297|gb|EDU42923.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 520 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 140/481 (29%), Positives = 218/481 (45%), Gaps = 39/481 (8%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFA 83 E++ S+I IE +N + NA I + A A A+E ++++ G+A L IPI +KD + Sbjct: 47 EVISSFIANIEANNKRTNAIISL-NPNALAIADEKEEQLSAGNATGSLFCIPILLKDNYD 105 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 TK + T + L +P ++ + GA++LGK N+ E A+ + +S G I+ Sbjct: 106 TKDLPTTGGNLALARSQPTEDAPSVAAFKNAGAIILGKANLHELALEGISVSSLGGQTIN 165 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P+ DST GSSGG+ AAVA C GTDT S+R PAS I+PT G Sbjct: 166 PY---DSTRTPG--GSSGGTGAAVAASFCVFGTGTDTVNSLRSPASANSLCSIRPTRGLI 220 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP----DY-ERA 256 +R GII + + D G I RTV+D A L +A GYD D +P P DY Sbjct: 221 TRAGIIPISKTHDVIGPIGRTVKDVATALTVMASTGYDAADNDTALVPGPIRGIDYASSL 280 Query: 257 LDQSIQGMTVGIPKEY--RLDYLSPT-IDKTWQQGISWLKDAGAKIVEIS-LPHTQYALP 312 S++G+ +G+ + R D T ++ +S L G +V I+ + A+ Sbjct: 281 SSASLKGLRIGVLSGFFNRTDTPEVTPVNNAMDSVMSRLSAEGVTLVPINETIYNATAIQ 340 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDIL-EMYENTRSIGFGQEV----KHRIMIGT 367 A Y + E + +Y R L E L E+Y G G E + T Sbjct: 341 AAYDVQRFEYRQLMDQYLE-RPSLGGEHPTTLAELYSRKAVNGSGGEFLVIPSQYEYVNT 399 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 ++SS ++ R IR L +D I+ P +G + SG G Sbjct: 400 ALVSSTANATYLDRQAGIRNLTLALLNTFTANSLDAIIYPEQKNLVVKIGS-PSQSGRNG 458 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIE 481 + + G P ++VPA E +P+G++++G+P+ E+ L VG +E Sbjct: 459 --------ILAALTGTPVVTVPAGFSEPSDEAPAGVPIGMEILGRPWEEQKLLGVGYAVE 510 Query: 482 K 482 + Sbjct: 511 Q 511 >gi|322692904|gb|EFY84787.1| amidase [Metarhizium acridum CQMa 102] Length = 487 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 134/506 (26%), Positives = 233/506 (46%), Gaps = 68/506 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGI 74 LR+ ++ E + + E + S +NA+I ++ +A AAA++ D I + L G+ Sbjct: 21 LRNHKLTVREHISDVLGRAERAQS-LNAFINLLPDQALAAADKIDAAIAKREPLPPLAGL 79 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SS 132 I +KD G ++ L P + +KL GAV++GK NM E A G S+ Sbjct: 80 AIVVKDNINLAGFPNTGGTNALLTACPSNTAPSLEKLMVAGAVVIGKTNMHELAFGVTST 139 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + + GPV +P+ PGGSSGG++AA+A + +GTDTGGS R PA+ TG Sbjct: 140 NLSPFAGPVRNPY-----AINMIPGGSSGGTAAAIASRVVTCGLGTDTGGSSRIPAALTG 194 Query: 193 TVGIKPTYGRCSRL-------GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 G +P+ G G++ + + D G + R++ + +L I+G Sbjct: 195 IAGYRPSVGDGGEQRRYHDDHGVLPISHTRDTVGPMGRSMAEVTLLDFIISG-------- 246 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 RA + G+ +GIP L ++KT + L++AG ++V+ +P Sbjct: 247 -------RPRAKPAQLHGVRLGIPP-VLWTGLDKELEKTVLRAQHMLQEAGIELVKNDIP 298 Query: 306 H-----TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + + LP I+ EA +++ Y G R++G + ++++ S +VK Sbjct: 299 NLLELDSAVGLP----IAVHEALTDIPAY---LQGSRIKGVRLEDIFDGISS----PDVK 347 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSAFPL--- 416 ++ G+ + + ++ + + A + R +++ + + F Q +D IL PTT A P+ Sbjct: 348 --LVFGSIIDDTFGHEYNQVMAVR-RPALQKLYADYFRQHRIDAILFPTTILPATPIDIV 404 Query: 417 ---GKEENNSGSMGHIYNDVFTVAVNM------AGLPAISVPAALCEKKMPLGLQLIGQP 467 G N G D FT AG+P +S+P +P+G+++ G Sbjct: 405 HGSGNVSINCGP----PMDAFTAYTRNTAPGSDAGIPGLSIPVGKTADGLPVGIEIDGPL 460 Query: 468 FREETLFSVGQIIEKEAGYFRPHKWW 493 +E L S+G +EK G K W Sbjct: 461 GSDERLLSLGLAMEKVLGCLPGPKPW 486 >gi|312087095|ref|XP_003145335.1| amidase [Loa loa] gi|307759501|gb|EFO18735.1| amidase [Loa loa] Length = 515 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 126/523 (24%), Positives = 221/523 (42%), Gaps = 92/523 (17%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ + + +R+++I+++ LV++YI+ I+ N +NA +++ ++A A+E D+ Sbjct: 46 KLLMISATRAAQMIRNREITSLNLVEAYIRRIKEVNGTINAVVQMNFKEALIKAQEIDEM 105 Query: 63 IINGDA-----------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 + DA + L G+P +KD G++ + + ++ V Q++ Sbjct: 106 LECLDADSDNFKSLPVKKPLLGVPFTLKDSIEVNGLYCTVGISYREKSVSNKDAIVVQRM 165 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 D+GA++L N+ E M + YG +P+ S + GGSSGG +A ++ Sbjct: 166 KDSGAILLAVTNVPEVCMWWESVNVVYGRTRNPYDS-----RRISGGSSGGEAALISAAG 220 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD--------QAGIITR 223 IG+D GSIR P F G G+KPT G G + P L+ G I R Sbjct: 221 SVIGIGSDIAGSIRMPCYFNGVFGLKPTPGVIPLEGHL---PHLNGYRSEKMLLIGPICR 277 Query: 224 TVRDSAILLKAIAGYD-----ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL- 277 D ++LL+ AG + + DA C N+ K+ R+ Y+ Sbjct: 278 YAEDLSVLLRVFAGTEGTNLLQLDAPC-NM---------------------KKIRVFYME 315 Query: 278 ---SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 +P + + LK P YAL +++ S A + ++ Sbjct: 316 GLKTPLVQDMNDEAFQTLKKENP-------PLVHYAL-EFFLTSMDVADA--PKFAMHMT 365 Query: 335 GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL--------RARKIR 386 L+V +E+++ G+ V I T ++ D H+ + R R Sbjct: 366 DLKVNINCFIELFKWV----LGKSVHTLPAIVTGIV-----DEHFTPFNEEQKQKLRSQR 416 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 + R+ E ++L P+ PT A ++ + N +T N LPA+ Sbjct: 417 DRLSRELKELLSDN-GILLFPSFPTEA------PYHNQPLFTPLNFAYTALWNTLALPAV 469 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 P L +PLG+Q IG P + L +V Q +EK G +RP Sbjct: 470 QCPMGLNNHDIPLGVQAIGAPGSDSLLVAVAQDLEKGFGGWRP 512 >gi|77553129|gb|ABA95925.1| Amidase family protein, expressed [Oryza sativa Japonica Group] Length = 603 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 131/475 (27%), Positives = 219/475 (46%), Gaps = 52/475 (10%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +++ V++ ++ A++ + M +I + AEES R G ++G Sbjct: 142 SGEVTPVQVAKRFLAAVKECSGPGLNMAFFISYSPEDIIRQAEESTLRYQRGTPLSAMDG 201 Query: 74 IPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 I + +KD T + L ++ V +L GAV+ GK NM E G+S Sbjct: 202 ILVAVKDEIDCLPYPTTGGTRWLGRARACAADAAVVAQLRACGAVLAGKTNMHELGAGTS 261 Query: 133 NETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 ++G +P PG GSS GS+AAV LC ++G D GGS+R PA Sbjct: 262 GINPHHGSTRNP---------HNPGRVSGGSSSGSAAAVCAGLCPVALGVDGGGSVRMPA 312 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG KPT GR S G++ ++ GI+ TV D+A+ AI + L Sbjct: 313 ALCGVVGFKPTAGRLSNAGVLPLNWTVGMPGILAGTVEDAAVAYSAIVDQSQPSYLRPEL 372 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAKIVEISLPHT 307 +P + +L SI+ + + ++ D S I + + L G + +++++P Sbjct: 373 NLPLLKSSL--SIKNIKLAKYAKWFNDS-SEDIRSCCDKSLQMLHAHYGWETLDVTIPEI 429 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + A+Y+ +E +++LA+Y D L+ E G +V R+ +G Sbjct: 430 EEMRLAHYVTIGSECTASLAKY-----------LDKLKRSE------IGWDV--RVALGV 470 Query: 368 Y-VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 Y SSR Y +S LR R++ F + + DVI++P T +A+ L + SG Sbjct: 471 YGSFSSRAYLNSQRLRNRQMY------FHKEIFKTADVIVSPMTGVTAYKLQDDALKSGE 524 Query: 426 MGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + +I +++A N GLPAI+V + +P+GLQ IG+P+ E TL + Sbjct: 525 LDYINGAALVRYSIAGNFLGLPAITVMVGYDKAGLPIGLQFIGRPWSEATLLHIA 579 >gi|323358844|ref|YP_004225240.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] gi|323275215|dbj|BAJ75360.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] Length = 480 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 139/484 (28%), Positives = 222/484 (45%), Gaps = 42/484 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E +RS ++SAVE Y+ ++ N +NA + + A ESD RI G Sbjct: 6 LSATELARLIRSGEVSAVEAARHYLDRLDAVNPAVNAIVWIDRDDVLRRAGESDDRIRRG 65 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNM 124 D +R EG+P+ IKD A + S ++ RP + +T L + G V+ G+ N Sbjct: 66 DTSRPFEGVPMPIKDLVAVRDQPLTYSSMAVEE-RPAEANEITVDLIEEAGFVLFGRSNS 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF ++ E + +G +PW ++D +T GGSSGG+SAAVA + + +D GGSI Sbjct: 125 PEFGALTATENARHGKTRNPW-NLD----YTSGGSSGGASAAVAADIAPIANASDGGGSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R P++ TG VG+KP+ GR I S+ S + G ITRT+ D+A +L A+ D Sbjct: 180 RVPSAATGLVGLKPSRGRIPN-DIRSWEHSTTE-GAITRTIEDAAGVLDALGRLDPLGWY 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEIS 303 P Y + + + +G+ E +PT +D + + L A+ +E Sbjct: 238 SAPAPARPYLDEIRSAGPRLRIGLLLE------APTGVDVHPENREAAL--VAARALEAL 289 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 H P + ++L + +E D LE Y +++R Sbjct: 290 GHHVAPVSPFLFSERATRGFADLI-ISASTWASPIEDADKLETY-----------IRYR- 336 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT--PTSAFPLGKEEN 421 Y ++ + Y + + R + + DV+LTPTT PT +E Sbjct: 337 ----YDRAASFHAGEYAEIATLLQIETRQVNAQWGRDFDVLLTPTTAVPTPLVGSVYDEA 392 Query: 422 NSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N+ G + FT N++GLPA+S+P MPLG QL+G P+ E TL +G Sbjct: 393 NNDPAGERLTEFSTISFTAFCNISGLPALSLPVHTGSNGMPLGAQLVGAPYDEATLLRLG 452 Query: 478 QIIE 481 +E Sbjct: 453 AELE 456 >gi|33595385|ref|NP_883028.1| amidase [Bordetella parapertussis 12822] gi|33565463|emb|CAE40096.1| probable amidase [Bordetella parapertussis] Length = 424 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 24/243 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVA----QKARA-A 55 M L+ + + E+R+RL + +V+LV + + I Q+ A+ V A +KARA Sbjct: 1 MQPLHLLGLDEARERLMAGACDSVDLVQACLDRIAAREEQIRAWAWVDATGALRKARAMT 60 Query: 56 AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 D R R L G+PI +KD T + T S I G RP + + + G Sbjct: 61 GARPDPR------RPLAGLPIAVKDIIDTADMPTAYGSPIYAGHRPAWSAYCVAAIETAG 114 Query: 116 AVMLGKLNMDEFAMGSSNET-SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 ++LGK EFA + T + + P + TPGGSSGGS+A VA F+ A Sbjct: 115 GIILGKTATSEFAHSAPPATRNPHAP------------QHTPGGSSGGSAACVADFMAPA 162 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 ++ T TGGS +PA+F G VG KP+ G R G+ A SLD G++ R V D +L Sbjct: 163 ALATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAVADIQLLAGV 222 Query: 235 IAG 237 +AG Sbjct: 223 LAG 225 >gi|254416509|ref|ZP_05030261.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] gi|196176713|gb|EDX71725.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] Length = 468 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 140/502 (27%), Positives = 219/502 (43%), Gaps = 73/502 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L F E +R +S +ELV+ Y+ I+ N Q+ +Y V A A A+ + Sbjct: 4 TDLAFTPALEQAQLIRQGQVSPLELVELYLARIQQFNPQLGSYFSVATDMALADAKAKTE 63 Query: 62 RIIN-GDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ D+ +L G+PI IKD A +G+ + IL Y+ V ++ G V Sbjct: 64 QLTQVRDSAELPPFFGVPIAIKDLTAVQGLPCSYGTPILKDKIAPYDDGVVARIKQAGFV 123 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK E E + P +PW ++TPGGSSGGS+AAVA LC + G Sbjct: 124 ILGKTATSEVGSLPYTEPPGFPPARNPWNL-----EYTPGGSSGGSAAAVAAGLCPIAQG 178 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-QAGI-----ITRTVRDSAIL 231 +D GGS+R PAS G VGIKP GR +SFAP D Q GI I RTV D+A L Sbjct: 179 SDGGGSVRGPASCCGVVGIKPARGR------VSFAPVGDRQNGIATNGSIARTVADAAAL 232 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L ++GY D + P + A Q + + + + I Sbjct: 233 LDVMSGYIPGDPYWLPEPEVSFLEATRQPLGQLRIA-----------------FSTAIPP 275 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-----KDILEM 346 L DA A++ + ++ T L G +VE + ++E Sbjct: 276 LGDA-AEVCQQAVHETARRL--------------------EEMGHQVEPGCPDFRALIEP 314 Query: 347 YENTRSIGF---GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 ++ G G V + ++ + YL+A +I R FE V Sbjct: 315 FQKVWQAGVTATGIPVAALSPMNQWIAAQSGSAGEYLQAVAQMQIISRQIVGFFEN-FQV 373 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA----VNMAGLPAISVPAALCEKKMPL 459 ++ P +G+ + S ++N + +A N +GLPAI++P K +P+ Sbjct: 374 LVLPVYMHPTIRVGEWADLSPEE-TLHNIIRWIAPCPPFNASGLPAIALPTGFDSKGLPV 432 Query: 460 GLQLIGQPFREETLFSVGQIIE 481 G+QL+G+P E TL ++ +E Sbjct: 433 GVQLVGRPAAEATLIALATRLE 454 >gi|146339541|ref|YP_001204589.1| putative amidotransferase [Bradyrhizobium sp. ORS278] gi|146192347|emb|CAL76352.1| putative amidotransferase [Bradyrhizobium sp. ORS278] Length = 474 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 115/482 (23%), Positives = 207/482 (42%), Gaps = 47/482 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--- 70 DRL++ DI+ ++ +D+ I+ + ++NA + +AR A K +++ A + Sbjct: 16 DRLKAGDITPLDCLDALEARIKVVDDKVNALPTLCFDRARDHA----KALMSKPAHERGL 71 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI IKD +G+ T S I P + + L NG V+ K N EF G Sbjct: 72 LAGLPIPIKDLTDVQGVLTTQGSPIFKDRIPERSDLLVEHLEANGGVIYAKSNTPEFGAG 131 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ +G +PW T + G S G + A G A G+D GGS+R PASF Sbjct: 132 ANTFNEVFGATRNPW----DTSRSAAGSSGGAAVALATGMAWLAH-GSDMGGSLRNPASF 186 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G +G++P++GR + S +L G + R V D A+LL A++G D + P Sbjct: 187 CGIIGLRPSFGRVAHTPATSVDRNLGVQGPMARNVEDLALLLDAMSGEHAADPISLPSPA 246 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + A + + + + + + P + ++ + G IVE + P A Sbjct: 247 TSFLSAARSGKKPVRIAYSPDLGITPVDPEVIAVTRKAAQRFSELGV-IVEEAHPDFSEA 305 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 ++++ + + +++ + +R + +++ E + Q Sbjct: 306 HECFHVLRALDFA--MSKQELLRTKRDLLKPEVIWNIEEGLKLSVAQ------------- 350 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--SGSMGH 428 RA R I + FE D++L P T FP+ EN + GH Sbjct: 351 --------IARAEAQRVAITARAVKFFET-YDLLLAPATIVPPFPV---ENRYVAECAGH 398 Query: 429 IYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +++ A+ +A PA+S+P +P+GLQ+I +P + L + +++E Sbjct: 399 TFDNYVQWLGIVYAITLACCPALSLPCGFTASGLPVGLQMIARPRNDAGLLAGAKVLEDI 458 Query: 484 AG 485 G Sbjct: 459 LG 460 >gi|17988634|ref|NP_541267.1| amidase [Brucella melitensis bv. 1 str. 16M] gi|260565053|ref|ZP_05835538.1| amidase [Brucella melitensis bv. 1 str. 16M] gi|17984438|gb|AAL53531.1| glutamyl-tRNA(gln) amidotransferase subunit a [Brucella melitensis bv. 1 str. 16M] gi|260152696|gb|EEW87789.1| amidase [Brucella melitensis bv. 1 str. 16M] Length = 462 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 135/493 (27%), Positives = 219/493 (44%), Gaps = 40/493 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++LP D + LD ++G+ +G+ +L D+ +A A Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL-------WLDAGFDEPVGGETRAAVEAAA 281 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFG 356 K+ A II P N DG+ R+ DI +M ++ Sbjct: 282 KLFA----------DAGAIIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQA---- 327 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ I T + YL ++ + R+ A + D I++PT P +P Sbjct: 328 -KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPMPTYPA 384 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + + + Sbjct: 385 EWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDLGVLRL 444 Query: 477 GQIIEKEAGYFRP 489 + E RP Sbjct: 445 AKAYEDMRPVQRP 457 >gi|320330845|gb|EFW86819.1| amidase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 514 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 132/492 (26%), Positives = 223/492 (45%), Gaps = 51/492 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ ELV +Q IE N+ Q+NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGSLTSAELVQDLLQRIEALNNNGPQLNAVIEVNPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G +++ V ++L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNINTGDKMQTTAGALAMVGSPAPHDAFVVKRLREAGAIIIGK 161 Query: 122 LNMDEFAM--GSSNETSYYG---PVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 N+ E+A G + + + G + P+ S+D P GSS GS+ +A + Sbjct: 162 ANLSEWAFFRGENPPSGWSGRGGQTLHPYNLSVD------PRGSSTGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA G VG++PT G SR G+I D G + R+V D+AI+L A+ Sbjct: 216 LGTETNGSIIQPAQTNGVVGLRPTLGLLSRTGLIPLTRRQDTPGPMARSVTDTAIMLTAM 275 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGIS 290 +G D D V ++ +++G +G P RL + S D +Q+ Sbjct: 276 SGTDPLDDATGQASTDTVNYFDHLSTDALRGKRLGYP---RLTWDDKSMDDDPDFQKAKI 332 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ AGA +V I +P + P + ++ + L Y R GL V D + + NT Sbjct: 333 SLQSAGAILVPIDVPDIDNS-PEFGVML-QDFKRELNAYLNTRPGLEVSTLDDIIAF-NT 389 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 S Q ++I + S+ D YL D +Q +D ++ Sbjct: 390 ASPST-QVYDQNLLIQS---SNTPVDPDYLSK-------ATDLRNVNQQLIDGLV----- 433 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++++ ++ + F +AG P I+VP + MP GL + + + E Sbjct: 434 --------QQHSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSKAWDE 485 Query: 471 ETLFSVGQIIEK 482 L S +E+ Sbjct: 486 ANLLSYAYALEQ 497 >gi|254415952|ref|ZP_05029709.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] gi|196177379|gb|EDX72386.1| Amidase, putative [Microcoleus chthonoplastes PCC 7420] Length = 312 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 99/239 (41%), Positives = 130/239 (54%), Gaps = 10/239 (4%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 VS+ S D+++ +LV Y IQA E+ N+ +NA I + + A E +R Sbjct: 43 VSDVNQAFDSGDLTSEQLVQLYLNRIQAYEDRNAGINALISINSNALAEAKELDRERQEK 102 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L GIPI +KD + T + T A S +L G P ++ QKL GA++L K NM Sbjct: 103 GKRSPLHGIPIILKDNYDTADMPTTAGSVLLKGSVPPDDAFTVQKLRQAGAIILAKANMS 162 Query: 126 EFAM--GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA G +S G ++P+ P GSSGGS+AA+A L + GTDT GS Sbjct: 163 EFASSDGWLGYSSLGGLTLNPYNL-----SRNPSGSSGGSAAAIAANLAMLATGTDTSGS 217 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 IR PA+ TG VGIKPT G SR GI+ S D AG + RTVRD+AI L +AG D D Sbjct: 218 IRGPAAVTGIVGIKPTQGLVSRDGIVPLTLSFDTAGPMARTVRDAAIALGIMAGVDAND 276 >gi|148272307|ref|YP_001221868.1| putative Asp/Glu-tRNA amidotransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830237|emb|CAN01170.1| putative Asp/Glu-tRNA amidotransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 475 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 146/521 (28%), Positives = 232/521 (44%), Gaps = 75/521 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL+ ++ + D+L+ +++ ELV Y++ IE + + A+ V A A A + Sbjct: 1 MFELHHLSAQDLWDQLQRGEVTPTELVTHYLERIERLDPGLGAFTTVTADLALERARFVE 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE---STVTQKLWDNGAV 117 + + L G+P G KD +G+ T S + FR H + Q L D G + Sbjct: 61 REVPR--TAPLWGLPFGDKDLSERQGVRTTFGSRL---FRDHVSDRTDAIPQALDDAGGI 115 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGK + EF + S E+ P +PW D+T GSSGG++ AVA L + G Sbjct: 116 SLGKTSAPEFGLPSYTESLVAPPARTPW---DTTRGAG--GSSGGAAVAVAAGLLPFAPG 170 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 +D GGS+R PA+ TG VG+KP+ G + G S A L G + R+V D+A+LL A+ Sbjct: 171 SDGGGSVRIPAAATGLVGLKPSRGLVPAGSGQESLA-GLVVPGPLARSVADAAMLLDAMI 229 Query: 237 GYDECDATCVN--LPVPDYERA---LDQSIQGMTVGIPKEYRLDYLS------------- 278 G VN +P P RA D + G V +++ ++ Sbjct: 230 GR-------VNGRIPHPFTLRAPEDPDGDLLGAAVRGEGRFQIGVMTTTPWDDAYEIVRD 282 Query: 279 PTIDKTWQQGISWLKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 P+ D + L G + +++L P YA PA+ I A A+ G+ Sbjct: 283 PSADDALALAVRELATMGHGLEDLALRPDPTYA-PAFRTIWQAGAA-----------GIP 330 Query: 338 VEGKDILEMYENTR-SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 EG+ + + TR + G+E LS+R + + F Sbjct: 331 AEGEQLDLLEPLTRWLVERGRE-----------LSARDLARALAQLAAYERSVIAQFAH- 378 Query: 397 FEQGVDVILTPTTPTSAFPLG---KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 VD +LTP P+G E+ + +T N+ GLPAI++P L Sbjct: 379 ----VDAVLTPALAQEPRPVGWYDAEDGERNFAQQVAYTPYTSFANVTGLPAITLPVHLT 434 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR--PHKW 492 + +P+G+QLIG+P E TL ++G+ +E+ + R P +W Sbjct: 435 DDGLPMGVQLIGRPGGEATLLAIGRQLERRLHWQRRHPPQW 475 >gi|320322054|gb|EFW78150.1| amidase family protein [Pseudomonas syringae pv. glycinea str. B076] Length = 514 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 132/492 (26%), Positives = 223/492 (45%), Gaps = 51/492 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ ELV +Q IE N+ Q+NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGSLTSAELVQDLLQRIEALNNNGPQLNAVIEVNPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G +++ V ++L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNINTGDKMQTTAGALAMVGSPAPHDAFVVKRLREAGAIIIGK 161 Query: 122 LNMDEFAM--GSSNETSYYG---PVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 N+ E+A G + + + G + P+ S+D P GSS GS+ +A + Sbjct: 162 ANLSEWAFFRGENPPSGWSGRGGQTLHPYNLSVD------PRGSSTGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA G VG++PT G SR G+I D G + R+V D+AI+L A+ Sbjct: 216 LGTETNGSIIQPAQTNGVVGLRPTLGLLSRTGLIPLTRRQDTPGPMARSVTDTAIMLTAM 275 Query: 236 AGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGIS 290 +G D D V ++ +++G +G P RL + S D +Q+ Sbjct: 276 SGTDPLDDATGQASTDTVNYFDHLSTDALRGKRLGYP---RLTWDDKSMDDDPDFQKAKI 332 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ AGA +V I +P + P + ++ + L Y R GL V D + + NT Sbjct: 333 SLQSAGAILVPIDVPDIDNS-PEFGVML-QDFKRELNAYLNTRPGLEVSTLDDIIAF-NT 389 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 S Q ++I + S+ D YL D +Q +D ++ Sbjct: 390 ASPST-QVYDQNLLIQS---SNTPVDPDYLSK-------ATDLRNVNQQLIDGLV----- 433 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++++ ++ + F +AG P I+VP + MP GL + + + E Sbjct: 434 --------QQHSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSKAWDE 485 Query: 471 ETLFSVGQIIEK 482 L S +E+ Sbjct: 486 ANLLSYAYALEQ 497 >gi|76802916|ref|YP_331011.1| amidase [Natronomonas pharaonis DSM 2160] gi|76558781|emb|CAI50374.1| probable amidase [Natronomonas pharaonis DSM 2160] Length = 477 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 126/486 (25%), Positives = 220/486 (45%), Gaps = 53/486 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+ + ++V++ + I+ ++ NAYI V A AR A E ++ G L G+P Sbjct: 15 VRNGEYEVADIVETTLDRIDERGAETNAYITVTASAARERAREVQAQVDEGAELPLAGVP 74 Query: 76 IGIKDCFATK-GI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 + IKD TK G+ +T+ + D TV ++L GA+++G N E Sbjct: 75 VAIKDLSETKAGVPNTKGLEPLADTVAEETSVTV-RRLEAAGAIVVGTTNTPELGHKVRT 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + GP +P+ + + GGSSGGS+AA+A LC + G+D GGS+R PA+ G Sbjct: 134 DNRLQGPTGTPFDT-----AYNAGGSSGGSAAALADGLCVLATGSDVGGSLRNPAACCGV 188 Query: 194 VGIKPTYG---RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 V +KP++G R +R+ + G + R V +LL+ +AG D D +++P Sbjct: 189 VALKPSHGLVPRGNRVNGFRGHTPIGVLGPMARDVESLGMLLEVLAGKDSVDP--LSVPQ 246 Query: 251 PD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 PD Y+ + + + + + P++ KT + +S L+ AGA + +SL +Y Sbjct: 247 PDSYDEPDGSVVDSLRLAYSPDLDCFAVDPSVRKTVRSTLSSLEAAGATVEAVSLETPEY 306 Query: 310 ---------ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 A+ ++ + E ++L G D+LE Y+ +EV Sbjct: 307 GELTHAYITAVTTFFATAVTELEASL-------------GVDLLEAYD--------EEVP 345 Query: 361 HRIMIGTYVLSSRCYD-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF----P 415 + T V R +D + Y RT + E + D ++ P+ T P Sbjct: 346 PELR--TLVSMGRSHDINTYTGTEFPRTELFHAI-EPVCKEYDALVCPSLATPPLTHDEP 402 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +E + + G + N+ G P ++VPA +P+G+Q++G+ F E TL Sbjct: 403 FPQEIDGQSTGGLPTDWTMAWPFNLTGHPVVNVPAGTV-GGLPVGMQVVGETFSEATLLD 461 Query: 476 VGQIIE 481 + +E Sbjct: 462 IAAAVE 467 >gi|306845188|ref|ZP_07477764.1| amidase [Brucella sp. BO1] gi|306274347|gb|EFM56154.1| amidase [Brucella sp. BO1] Length = 445 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 190/428 (44%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + D ++ + Q+L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDVAGEPTLAGSVVRRDAPLAGCDAPIVQRLRNAGAVIIGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ P Sbjct: 168 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILTDAVMAGEK--------P 218 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 +P AL ++G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ H Sbjct: 219 IP--PEAL--PVKGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDHLIG 274 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 275 RLKEATRIGSIAGIEASHIHASTWLADPDANVDIRVKRPLSVRMKVPLEAY--------- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 326 ----HALM-------------------ETRKTLAREMDERL-SGFDMFATPATPIVAPAI 361 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + + + T N L +I++P + K+P GL L + ++ L Sbjct: 362 ASVTHDEEEYDRVESLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNGSDKRLL 419 Query: 475 SVGQIIEK 482 + +EK Sbjct: 420 AAALSVEK 427 >gi|187922172|ref|YP_001893814.1| amidase [Burkholderia phytofirmans PsJN] gi|187713366|gb|ACD14590.1| Amidase [Burkholderia phytofirmans PsJN] Length = 475 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 135/511 (26%), Positives = 220/511 (43%), Gaps = 77/511 (15%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ ++ ++ R +S VE++ + I + +NA+ + ++A +AA E++ Sbjct: 1 MSEIVMLSAAQLVAGFRQCTLSPVEVMCEVLDRITKLDPVVNAFCALDEEEAMSAASEAE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R + G+ L+G+P+ +KD A G+ T+ S R ++ +L GA+ Sbjct: 61 RRWMRGEPCGPLDGVPVSVKDLVAVAGLPTRQGSWTASPDRESVDAPAVARLRRAGAIPF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF + G +PW + + +PGGSSGGS+ AVA L S+ TD Sbjct: 121 GKTTTSEFGNKIVTDCPMTGATRNPWDT-----RLSPGGSSGGSAVAVALGLGPLSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PA ++G VG KPT+ S+ +L G ITRTVRD+A++L A+ G + Sbjct: 176 GGGSIRIPACWSGVVGFKPTFALVPAGSAASWT-ALSTLGPITRTVRDAALMLDAMTGTN 234 Query: 240 ECDATCVNLPVPD-------YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 TC N P Y LD + G+ + ++P I + + + Sbjct: 235 ----TCANSDGPPGTGRTSAYSAGLDDGVAGLRIAWCAAPAGVSVAPDIAECVGRAVDAF 290 Query: 293 KDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 GA ++ + P Y YG +G+ ++ Sbjct: 291 GTLGATVIPTDVAPIVDY------------------------YG---DGR----IHSVQW 319 Query: 352 SIGFGQEVKH-----RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF----TEAFEQGVD 402 S+ F Q V+H R ++ + + + A + L+ R E F + D Sbjct: 320 SVFFAQRVRHMEAADRTLLDPDLTALADAGARIDTATFVDALLARHALGASMETFFKHYD 379 Query: 403 VILTPT-----TPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKK 456 +++TPT P + P GH+ N + T N AG+PAISVP Sbjct: 380 LLVTPTFHCGPPPVPSLP-----------GHLRNAPLLTAWCNQAGVPAISVPCGF-AGD 427 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 MP GLQ+IG+ + + + E G F Sbjct: 428 MPTGLQIIGRRGSDALVLRAARAYELARGDF 458 >gi|33592922|ref|NP_880566.1| amidase [Bordetella pertussis Tohama I] gi|33572570|emb|CAE42157.1| putative amidase [Bordetella pertussis Tohama I] gi|332382334|gb|AEE67181.1| amidase [Bordetella pertussis CS] Length = 449 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 16/237 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAM 129 ++G+PI IKD F G T A S G ++ V ++L GAV++G+ NM EFA Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVARQGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFAY 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW D PGGSS G++ +V + + +IG+DTGGS+R PA+ Sbjct: 129 SGLGLNPHYGTPRNPW---DRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAA 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KP+ R S G++ + +LD G + +VR A L +AG D+ D +P Sbjct: 186 LCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDAD-----MP 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P +++G+ + +P LD L + T+ ++ L +AGA I EI++P Sbjct: 241 AP-------AALRGLRLAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPE 290 >gi|325518340|gb|EGC98067.1| amidase [Burkholderia sp. TJI49] Length = 305 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 90/266 (33%), Positives = 129/266 (48%), Gaps = 14/266 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR----AAAEESDKR 62 + E +RSK +S VE + +Y+ IE N +NA +VA + R A A E D Sbjct: 22 LPAGELASAIRSKAVSCVETMRAYLDHIERVNGSINA---IVALRERDVLLAEAAEKDAA 78 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ + L GIP KD TKG+ T S I P +S ++ GA+ +GK Sbjct: 79 LARGEYQGWLHGIPQAPKDLAMTKGLRTTYGSPIFCDNVPQADSVGVARMRAAGAIFIGK 138 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG +P+ S GGSSGG++AA+A + + G+D G Sbjct: 139 TNTPEFGLGSHTFNEVYGATRNPYDLTKSA-----GGSSGGTAAALAARMLPVADGSDFG 193 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA+F G +P+ GR R G+ F L G + RTV D A LL AGYD Sbjct: 194 GSLRNPAAFCNIYGFRPSQGRVPRWPGVDVFVQQLGIEGPMGRTVGDVAQLLAIQAGYDP 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTV 266 D + + + LD ++G + Sbjct: 254 NDPLSLAEDPAVFAQPLDTDLRGKRI 279 >gi|146161510|ref|XP_001471102.1| fatty-acid amide hydrolase [Tetrahymena thermophila] gi|146146721|gb|EDK32053.1| fatty-acid amide hydrolase [Tetrahymena thermophila SB210] Length = 641 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 126/532 (23%), Positives = 230/532 (43%), Gaps = 67/532 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR------ 62 V+ + L +++ +LV+ + + + N Q+ A + ++A A+E DK Sbjct: 105 VTSIKKLLSKGKVTSEDLVNIFAKRCQQFNPQLEAITHLKYEEAIMKAKECDKLRKEKSP 164 Query: 63 IINGDARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ G L GIPI IK+ F KG T C L+ + P + + Q L +GA+ L + Sbjct: 165 LVQGL---LFGIPISIKEIFDEKGYPSTVGCIQRLN-YVPVEDGFIIQLLRKSGAIPLVR 220 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ + + YG V +PW D T GGSSGG ++ +A LC +G+D G Sbjct: 221 SNVPQCCFTFESVNRIYGRVKNPW---DLTK--MAGGSSGGEASIIASRLCPIGLGSDQG 275 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKA 234 GSIR PA+ G G KPT GRC G+ ++ + D AG + +++ D+ +L KA Sbjct: 276 GSIRIPAAMCGIYGFKPTSGRCVINGLTHYSEAFDGQTINKACAGPMAKSMDDTILLFKA 335 Query: 235 IA--------GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 + + D LP+ E AL+ S + G K + + Sbjct: 336 LCDPNILKEFNISQIDPNLTILPID--ENALNDSRKKRRFGYFKTLEVIDSCLAAQRAVD 393 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR-YDGVRYGLRVEGKDILE 345 I L++ G +++E+ +P + A+ S ++ NL G + + D L Sbjct: 394 ISIEKLRNLGHEVIEVEIPKQNEIIHAFLQNSFSDDMQNLKDILKGESFLDEYQMLDFLA 453 Query: 346 MYENT--RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL-IKRDFTEAF-EQGV 401 N+ + + F + ++L+ DSH +A + L ++++ + F E + Sbjct: 454 SIPNSMKKVLAFLMGALGEKRLKDHILADMNIDSHDYKAVVYQILQLRKEVLKVFDENKI 513 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGH--IYNDV-FTVAVNMAGLPAISVPAA------- 451 + I+ P T A P G + + + + ++N + FT V +P V Sbjct: 514 EAIICPANATPALPHGSSADVADIVAYQFMWNILDFTCGV----IPVTRVEEGEQHYENA 569 Query: 452 ---------------LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + + +P+ +Q++ PF+EE +V +II+ +++ Sbjct: 570 RVKDSISKKIDKYMRMKTEGLPIAVQVVAPPFKEEVCLNVMKIIDNGVQFYK 621 >gi|326317590|ref|YP_004235262.1| amidase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374426|gb|ADX46695.1| Amidase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 522 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 144/495 (29%), Positives = 237/495 (47%), Gaps = 63/495 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E R R+ ++IS VEL+D+ I IE N +NA +AR+ A E+++ ++ G Sbjct: 14 LTAPELRLRIARREISPVELLDACIARIEALNPYVNAITATCYDRARSEAREAERAVLRG 73 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 DA L G+P+G+KD AT+G+ T S I P ++ + +L GA++ GK N+ Sbjct: 74 DALGLLHGLPLGVKDLEATQGLLTTYGSQIYREHIPAEDNVLVARLRRAGAIVTGKTNIP 133 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G+++ + +G +P+ + GGSSGGS+AA+A + G+DTGGS+R Sbjct: 134 EMGAGANSRNTVWGATGNPF-----DPRLNAGGSSGGSAAALACDMLPVCTGSDTGGSLR 188 Query: 186 QPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA+ G VG +P+ G S ++ + P + G + RTV ++ + L A A Sbjct: 189 IPAAKCGVVGFRPSPGVVPSSRKLLGWTP-ISVVGPMGRTVEEACLQLAATA-------- 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLD---YLS-PTIDKTWQQGISWLKDAGAKIV 300 GM+ G P Y LD +LS P +D + + + + +D GA V Sbjct: 240 ------------------GMSAGDPLSYPLDPAMFLSLPEVDLSTLR-VGYTEDLGACAV 280 Query: 301 EISLPHT---QYALPAYYIISPAEASSNLAR----YDGVRYGLRVEGKDILEMYE-NTRS 352 + + T + A + S + +L +D +R V G E YE + S Sbjct: 281 DDGIRATFRGKIAAMRHLFRSCDPIALDLGDVHRCFDVLRAEAFVAGTR--EAYERDPAS 338 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +G + + ++ DS + +A + R L + F +AFE DVIL PTTP S Sbjct: 339 LGPNTRANYEMGAAMTLI-----DSAWAQAEQTRILAR--FQQAFES-FDVILAPTTPVS 390 Query: 413 AFP---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 FP L N + Y + T + PA+S+P + MP GLQ++G+ F Sbjct: 391 PFPWTELYASHINGEPQANYYRWLALTYVTTLTTHPALSLPCGRDGRDMPFGLQVVGR-F 449 Query: 469 REET-LFSVGQIIEK 482 R++ ++G+ +E+ Sbjct: 450 RDDLGTLAIGRAMEQ 464 >gi|226312133|ref|YP_002772027.1| amidase [Brevibacillus brevis NBRC 100599] gi|226095081|dbj|BAH43523.1| putative amidase [Brevibacillus brevis NBRC 100599] Length = 483 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 140/508 (27%), Positives = 227/508 (44%), Gaps = 64/508 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAE 57 MS ++ ++ E + + + ++ EL +++Q I N Q +NA E + A A AE Sbjct: 1 MSVIHETSILEWQAAMTAGTTTSRELTLAFLQRIATYNKQGIRINAICE-LNPDALAIAE 59 Query: 58 ESDK-RIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNG 115 D+ R ++G L GIP+ IKD AT +HT A + L ++ V KL + G Sbjct: 60 SLDRERAVSGSRGPLHGIPVLIKDNIATSDKMHTTAGALALADSFASADAFVVTKLREAG 119 Query: 116 AVMLGKLNMDEFAMGSSNE-----TSYYGPVISPWRS--MDSTDKFTPGGSSGGSSAAVA 168 AV+LGK N+ E+A SN+ +S G V++P+ +D + + + AV Sbjct: 120 AVILGKTNLTEWANFISNDMPDGYSSRGGQVLNPYGPGVLDVGGSSSGSAAGIAAGFAV- 178 Query: 169 GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDS 228 ++GT+T GSI PA VGIKPT G SR GII + S D AG + RTV D+ Sbjct: 179 -----VAVGTETSGSILHPAEQNSLVGIKPTVGLISRSGIIPISHSQDTAGPLARTVTDA 233 Query: 229 AILLKAIAGYDECDATC---VNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKT 284 AILL A+ G DE D L DY LD ++G +G+ + L Sbjct: 234 AILLGALTGIDEKDPVTGKSEGLAQTDYLPFLDADGLRGARIGVVRSRFLAECEAEEIAL 293 Query: 285 WQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASSN-LARYDGVRYGLRVEGKD 342 ++ I LK+AGA I++ +++P + ++ + N + Y +R +D Sbjct: 294 YEAAIEKLKEAGATIIDAVTIPTENAEWNIHVLVHEFKVGVNAYLKTLPASYPIR-SLQD 352 Query: 343 ILEM--YENTRSIGFGQEV--KHRIMIGTYV----LSSRCYDSHYLRARKIRTLIKRDFT 394 ++ +++ +GQE+ + GT L++ +D + + + ++K Sbjct: 353 VIAFNRAHEEQALLYGQELLEESEKTSGTLTEPEYLANLLFDLEMSQKQGLDAVMK---- 408 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 E +D +L P + A P AG P+I+VPA Sbjct: 409 ---EHQLDALLYPGSTGYAIP-----------------------AKAGYPSITVPAGYTS 442 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEK 482 P G+ L G F+E TL + E+ Sbjct: 443 AGKPFGIMLTGLAFQEPTLLRLAYAYEQ 470 >gi|317404333|gb|EFV84759.1| amidase [Achromobacter xylosoxidans C54] Length = 442 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 129/466 (27%), Positives = 210/466 (45%), Gaps = 62/466 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + LN + E+ +L+ ++++AV+LV + IE + ++A+ + Q A AE D+ Sbjct: 3 TALNRLGALEAARKLQRRELTAVQLVRACFARIEQRENTIHAWTALQKQAALDHAEALDR 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L G+PIG+KD F T + T+ S I + P ++ GA+++GK Sbjct: 63 SPLRGP---LHGLPIGVKDLFDTVDLPTRYGSPIYERHHPGLDAAAVALCRHAGAIVIGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EFA T GP +P + +TPGGSS GS+AAVA + ++G+ T Sbjct: 120 TVTTEFA------TYQAGPTRNP-----RNEAYTPGGSSSGSAAAVADDMVPFALGSQTA 168 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI +PAS+ G VG KPT+G R G+ S A SLD G R+V D+A+ Sbjct: 169 GSIIRPASYCGIVGYKPTFGAIPRAGVKSLAESLDTVGGFARSVPDAALF---------- 218 Query: 242 DATCVNLPVPDYERALDQSIQGMT-VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V + P R LD + +G+ + + + + + Q + L AGA + Sbjct: 219 --ASVMMRDP---RLLDLAYDAKPRIGMYRSLQWRHAQSETKEAFAQAAATLSRAGAHVE 273 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E+ LP L + A SS Y+ + + ++ K I + E I + +K Sbjct: 274 EVPLPPEHCMLVQLHADIMAFESSQALAYERLEHAAQLSPK-IQAILEAGAQISAEEHIK 332 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + +R +S RAR + + DV+L P E Sbjct: 333 N---------LARAAES---RAR----------VDGWFDKYDVLLAPA--------ASGE 362 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +G + F+ A + GLP +++P A + +P+GLQLIG+ Sbjct: 363 APFADLG-TGDPQFSRAWTLFGLPCLNLPFATGPQGLPVGLQLIGK 407 >gi|328886234|emb|CCA59473.1| Amidase [Streptomyces venezuelae ATCC 10712] Length = 486 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 125/492 (25%), Positives = 217/492 (44%), Gaps = 43/492 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L +++ +E+R ++++S VEL+ + I E + +NA+ E + ++A A ++ Sbjct: 8 SDLAYLSATEARRLFDARELSPVELMRAVIDRAEQTEPVVNAFTERLFEEALEQARHAED 67 Query: 62 RIINGDA---RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R + R LEGIP+ K+ A G S + G + V ++ + G ++ Sbjct: 68 RFLGKGGLTPRPLEGIPVATKEKHAIAGRSLTEGSLVNVGATATENAPVIDRILEAGGII 127 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 + EF++ + + +G +PW TPGGSSGG+ A++A + + Sbjct: 128 HARTATPEFSIATFTHSRLWGVTRNPWNP-----DLTPGGSSGGAGASLAAGSTLLASAS 182 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS R PA+FTGTVG K YGR + +S A G + RTV D +AG Sbjct: 183 DIGGSTRIPAAFTGTVGFKAPYGRIPGVAPLS-ADHYRGDGPMARTVDDCVTFANVLAGP 241 Query: 239 DECDATCV--NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D + L +P + GM + + + P ++ + L DAG Sbjct: 242 DPRDHVSLRPKLVLPTAY----APVAGMRLALCLRLGAYDVHPEVEAATRAVARALTDAG 297 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A + EI LP T+ L +IS A S + + + + + +D + Y + Sbjct: 298 AVVEEIELPWTRDDL----LISLAAHFSTV--FGALVSEVEAKHRDRMTAYAAAFADTMA 351 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 E + R+ YL ++ T ++R+ EA D ++ PTT P Sbjct: 352 -EARERV--------------SYLDGLRVETRMQRELAEAMAP-FDALICPTTAVPGLPA 395 Query: 416 ----LGKEENNSGSMGHIYNDVFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIGQPFRE 470 LG+ N G T N++ P ++VP+ +P G+Q++G + + Sbjct: 396 GDDLLGRLVVNGVDHGEPLWAAMTAPFNISNRCPVLNVPSGRSSWGVPTGVQIVGHTYDD 455 Query: 471 ETLFSVGQIIEK 482 T+F VG+ +E+ Sbjct: 456 PTVFRVGKALER 467 >gi|316935070|ref|YP_004110052.1| amidase [Rhodopseudomonas palustris DX-1] gi|315602784|gb|ADU45319.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 449 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 132/469 (28%), Positives = 206/469 (43%), Gaps = 53/469 (11%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIK 79 +A +LV+ + I + + A+I V A AA+ DK R GIPI IK Sbjct: 20 TARKLVEDCLARIADPAGEGARAFIHVDRDAALQAADAMDKLRAAKAAPSPFAGIPISIK 79 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F KG T+A S LD P ++ +L G V++G+ NM EFA +Y Sbjct: 80 DLFDIKGQVTRAGSRALDDNPPADSDAPAVARLRRAGFVVIGRSNMTEFAYSGIGINPHY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P + + PGGSS G++ +VA + A +GTDTGGS R PA+F G VG KP Sbjct: 140 G---TPKAAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIPAAFNGIVGYKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 + R R G + + SLD G + R+V A L DA + PV + Sbjct: 197 SQYRVPRDGAVPLSFSLDSIGPLARSVACCATL----------DAILADQPVGPL---IA 243 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + +GM + +P LD L + + + + L GA I +I +P + ++ Sbjct: 244 RPPKGMRIAVPTTVALDGLDAAVTAAFDRALKTLTSHGAIIEKIEVPE-------FAEVA 296 Query: 319 PAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 P A A Y R+ + +G ++Y+ V+ RI+ G ++ Sbjct: 297 PLGAKGGFAAAESYAWHRFLIVAQG----DVYD--------PRVRERILRGETQSAADYV 344 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGHIYNDVF 434 D + ARK +LI R A D + PTT +A + + ++ + + ++ Sbjct: 345 D--LVNARK--SLIAR--ASARLAPYDAVAMPTTAIAAPTIAELADDKAFTKANLLTLRN 398 Query: 435 TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 +NM AIS+P C + P+GL L G + +F V +E Sbjct: 399 CTLINMIDGCAISLP---CHQDGVPPIGLMLAGVNGADREIFEVAAGLE 444 >gi|149201452|ref|ZP_01878427.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Roseovarius sp. TM1035] gi|149145785|gb|EDM33811.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Roseovarius sp. TM1035] Length = 447 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 131/472 (27%), Positives = 207/472 (43%), Gaps = 63/472 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD- 60 +++ ++ E R RL S +SA++LV++ I IE +++A+ A AR A+ D Sbjct: 5 ADILMLSACELRTRLASGALSALDLVEACIDRIEAREPEIHAWAWFDADFARQQAKALDA 64 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R L G+P+ +KD T I T+ + G P ++ + +L GAV++G Sbjct: 65 QRQAGRPIGALHGLPVALKDIIDTAKIPTENGCPLDAGRIPFKDAAIVARLKAAGAVIMG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K E A + T +P + TPGGSS GS+AAVA + +IGT T Sbjct: 125 KTVTTELAYMHAGATR------NPLNT-----AHTPGGSSSGSAAAVADGMVPLAIGTQT 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+ +PAS+ G G KP++G R G++ +P+LD G+ RT D+A+L + + GYDE Sbjct: 174 GGSVIRPASYCGVTGFKPSFGAIPRTGVLMQSPTLDTLGVFARTPADAALLTEVLMGYDE 233 Query: 241 CDATCVN------LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D L V E L + + D P + + + I L D Sbjct: 234 GDPATTPAPVPPLLSVATSEPPLKPVFAFL-----RPPGWDKADPQLHAAFDELIEALGD 288 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG--VRYGLRVEGKDILEMYENTRS 352 ++ E+ LP+ A+ + A N A RYG ++ Sbjct: 289 ---QVFEVPLPN------AFNEAAEIRARINFAEMAKYYYRYGKSLD------------- 326 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G + + G L+ YL A ++ E FE+ D IL P T Sbjct: 327 -ALGPRTQEALNTGNATLA-----RDYLAALDWADVLYAGLGEIFER-CDAILCPAA-TG 378 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 P G E I+N ++T + G PA++VPA E +P+G+Q + Sbjct: 379 PAPEGLEYTGDA----IFNGLWT----LTGTPAVTVPAFTAENGLPMGVQFV 422 >gi|33597574|ref|NP_885217.1| amidase [Bordetella parapertussis 12822] gi|33574002|emb|CAE38322.1| putative amidase [Bordetella parapertussis] Length = 449 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 16/237 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAM 129 ++G+PI IKD F G T A S G ++ V ++L GAV++G+ NM EFA Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVARQGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFAY 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW D PGGSS G++ +V + + +IG+DTGGS+R PA+ Sbjct: 129 SGLGLNPHYGTPRNPW---DRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAA 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KP+ R S G++ + +LD G + +VR A L +AG D+ D +P Sbjct: 186 LCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDAD-----IP 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P +++G+ + +P LD L + T+ ++ L +AGA I EI++P Sbjct: 241 AP-------AALRGLRLAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPE 290 >gi|229493989|ref|ZP_04387758.1| 6-aminohexanoate-cyclic-dimer hydrolase [Rhodococcus erythropolis SK121] gi|229319058|gb|EEN84910.1| 6-aminohexanoate-cyclic-dimer hydrolase [Rhodococcus erythropolis SK121] Length = 476 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 145/492 (29%), Positives = 231/492 (46%), Gaps = 50/492 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL F V+ +RS +ISA EL ++ ++ IE +S +NA++ V+A +A A D+ Sbjct: 10 SELAFAGVAGQAALIRSGEISARELTENTLRRIERLDSTLNAFVRVLADEALDEATRLDQ 69 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQ----ACSHILDGFRPHYESTVTQKLWDNGA 116 R +G + L G+PI IKD G T A + I +S V ++L + GA Sbjct: 70 RQADGHSLGPLHGVPIAIKDENDVAGTPTTYGGAAATRIASA-----DSEVVRRLREAGA 124 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V++GK M EF + ET+ G +PW + ST SSGGS++AVA + AA+I Sbjct: 125 VIVGKTTMPEFGIWPFTETAANGYTRNPWDTGVSTGG-----SSGGSASAVASGMVAAAI 179 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G D GGSIR P++F G G+KP GR S + L G +TR+V DSA++ IA Sbjct: 180 GGDGGGSIRLPSAFCGLFGLKPQRGRVSTAPNRNLWRGLGTLGPLTRSVEDSALVYDVIA 239 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G D + + + + + + + + P+ + + + Sbjct: 240 GTTGIDDYTAETLRTSFAESAASAPAPLRIAVSTRSPVRGVRPSPE------VVAAVHSI 293 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLAR-YDGVR-YGLRVEGKDILEMYENTRSIG 354 A+++ H + P Y P ++ L + GVR LRV+ +LE + TR++ Sbjct: 294 AEMLSALGHHVEEHDPEY----PDATAAFLPQVLGGVRDEALRVDHPALLE--KRTRALA 347 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 IG +R Y + +I + + F + F D++L PTTP Sbjct: 348 ---------SIGRIAAPARVGKFAYRKGERIAATVNQVF-DTF----DLVLMPTTPALPR 393 Query: 415 PLGKEENNSGSMGHIYNDVFTVAV-----NMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P+G+ E S+ +A N+ G PA +VPA E+ +PL +QL+G+ Sbjct: 394 PIGQLEGT--SLLSAVRKALPIAAYCSIWNVCGNPAAAVPAGFSERGLPLSVQLVGRSGG 451 Query: 470 EETLFSVGQIIE 481 E T+ +V Q +E Sbjct: 452 EPTILAVAQQLE 463 >gi|116695356|ref|YP_840932.1| amidotransferase subunit A [Ralstonia eutropha H16] gi|113529855|emb|CAJ96202.1| amidotransferase subunit A [Ralstonia eutropha H16] Length = 458 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/229 (36%), Positives = 127/229 (55%), Gaps = 5/229 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + + D L ++ I+A L + ++ E S +NA+ + +A AA ESD+R Sbjct: 1 MGLRSALDALATRQITATALTEQALERAEASKRLLNAFSAIDWDRALKAAAESDRRYGER 60 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 R LEG+PI +KD TKG+ T+ S G P ++ + + L + GA+++GK E Sbjct: 61 RPRPLEGLPIAVKDLIDTKGMETRYGSAAYLGHVPAADAEIVKTLVERGAIIIGKTTTHE 120 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA G + ++ +G ++P +D T PGGSSGG++AA+A A +GTDTGGS+R Sbjct: 121 FAWGVTTASARFGDTLNP---LDHTR--IPGGSSGGAAAAIAHGAIMAGVGTDTGGSVRI 175 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 PA+ G VG KPT G S G+ AP+ D G++ V D +L A+ Sbjct: 176 PAALCGVVGYKPTLGTLSTRGVFPLAPTCDHVGLLGEQVDDVLLLADAV 224 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%) Query: 392 DFTEAFEQ---GVDVILTPTTPTSAFPLGKEENNSGSMGHIYND---VFTVAVNMAGLPA 445 DFT + VD ++ PT P +A L + G+ + +T N+AG PA Sbjct: 340 DFTARLHKVMSTVDYLVLPTCPCTAPHLDAGTVSIGAWTGTVREALMTYTAPFNVAGFPA 399 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 IS+P A E+ +P LQ++ +P + L + Q +E Sbjct: 400 ISIPLATGERSLPAALQIVAKPGDDGALLQIAQQME 435 >gi|168704054|ref|ZP_02736331.1| Amidase [Gemmata obscuriglobus UQM 2246] Length = 560 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 127/496 (25%), Positives = 218/496 (43%), Gaps = 75/496 (15%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F +++ ++R K +S+ EL Y+ ++ + + + + + A A E+DK Sbjct: 125 DLAFAPLADLALQVRHKFVSSTELTKLYLARLKKYDPALLCVVSLTEEVALRQAAEADKE 184 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP KD A G T + ++TV +L GAV+ K Sbjct: 185 IAAGKYRGPLHGIPWAAKDLIAYPGHPTTWGAGHFKDQTFEEKATVAARLDSAGAVLACK 244 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + A G + + G +PW ++ + G++ +A + GF +G++T Sbjct: 245 TTLGALAWG---DVWFGGTTRNPW-NIKQGSSGSSAGTASAVAAGLVGF----GLGSETH 296 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P++ G G++PT+GR SR G ++ SLD+ G + R+ D A++L AI G+D Sbjct: 297 GSIVSPSTRCGVTGLRPTFGRVSRHGCMALCWSLDKVGPMCRSAEDCALVLGAIHGFDGK 356 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 DAT + P ++ + ++ + VG E R L+ K L D G K+V Sbjct: 357 DATAQDRP---FDWPVKADLKELRVGF-VEGRFGGLADDDRKV-------LADLGVKLVP 405 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVK 360 I+LP A PA ++S + A +D + R G+ K+ + ++ NT Sbjct: 406 ITLP----AGPAGALMSMILDVESAAAFDDLTREGV----KENIGLWPNT---------- 447 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 G +V + YLRA++ RTL+ R+ T+ F + VD+ + Sbjct: 448 --FRRGRFVSA-----VDYLRAQRARTLLMREMTQVFGK-VDLYVN-------------- 485 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ND+ N+ G P + +P + P L G+ F E L ++ + Sbjct: 486 ---------GNDL--ALTNLTGHPTVCLPNGFTKTGAPTALTFTGKLFGEGALLTLAKAY 534 Query: 481 EKEAGYFR---PHKWW 493 + G+ R P + W Sbjct: 535 QDATGHHRKRPPQEAW 550 >gi|115737425|ref|XP_001203155.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115905943|ref|XP_789580.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 411 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 109/353 (30%), Positives = 167/353 (47%), Gaps = 43/353 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G + IKD A GI H L+GF P +++TV ++ D GA ++GK + Sbjct: 87 LAGKRVAIKDNVALAGIPMMNGCHALEGFTPSFDATVVTRILDAGATIVGKSVCENLCFS 146 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + T+ GPV +P +T GSS GS+ V +IG D GGSIR PA++ Sbjct: 147 GGSSTAAKGPVKNPHDPTRAT-----AGSSSGSAVVVQTGEVDMAIGGDQGGSIRLPAAW 201 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDA-TCVNL 248 TG VG+KPTYG G + SLD G +TRTV D YD DA ++ Sbjct: 202 TGVVGLKPTYGLVPYTGAMGIEMSLDHLGPMTRTVHDC---------YDGGMDARQHPHM 252 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP- 305 VP Y + L+ +I G+ VGI E + ++ + K + +S L+ GA + ++S+P Sbjct: 253 TVPQYTKELENLNINGLKVGILGEGFSMEGADAAVTKLLKDTLSKLELYGAVLKDVSVPL 312 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 HT + P ++ A G + R++ D ++++ I+ Sbjct: 313 HTICCGTGHVGYYP----TDFAIASGKMFSSRIDDLSDTMKLF---------------IL 353 Query: 365 IGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 G Y+ + Y S Y RAR + +++ + +A E VDVI PT P +A L Sbjct: 354 QGEYL--QKNYKSQVYCRARNLVFPLRKAYDQALES-VDVIAMPTIPFTASKL 403 >gi|118592380|ref|ZP_01549772.1| Amidase [Stappia aggregata IAM 12614] gi|118435038|gb|EAV41687.1| Amidase [Stappia aggregata IAM 12614] Length = 509 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 223/470 (47%), Gaps = 41/470 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGI 78 + + VEL+++ ++ IE N +NA + A+ ARA A E+ +R +G + L+G+PIG+ Sbjct: 22 ETTPVELLEACLERIEQINPAINALTALDAEPARAEAVEATRRWQSGTPKGPLDGLPIGV 81 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD TKG+ T S G P + + +L + GA++L K N+ E G +++ + Sbjct: 82 KDLQDTKGLLTTHGSPRARGNIPDKDLPMVARLREAGAIVLAKTNVPELGAGGNSKNPVW 141 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P+ GGSSGGS+AA+A L G+DTGGS+R PA+ G VG +P Sbjct: 142 GATGNPFDP-----NLIAGGSSGGSAAALATDLLPLCTGSDTGGSLRLPAALCGIVGYRP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-PDYERAL 257 + + + G + RT+ D ++L Y D ++ P PD L Sbjct: 197 SVDVIAHPTRPLGWSGISVLGPMARTMDDLLLMLSVCQSYSPDDP--LSAPADPDRFVQL 254 Query: 258 DQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 Q +Q + VG+ +++ ++ +T++ + L+ P + P Sbjct: 255 PQIDLQDLRVGVSEDFGGAPVASDTRETFRARVDVLR-----------PQVKECRPVDLD 303 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG-TYVLSSRCY 375 + + + ++ R + G+ I + ++ FG + + +G + L+ R + Sbjct: 304 LGDMDRTFDILRAESFVSAF---GEAIRQSPDD-----FGPHIAANVALGLSMSLADRAW 355 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE---ENNSGSMGHIYND 432 +H + R +R A + VD+IL PT+P S FP + E + +M Y Sbjct: 356 -AHLEQTRILRKF------NALMRDVDIILLPTSPVSPFPWTQSHAMEIDGHTMDIYYRW 408 Query: 433 V-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + T ++AG PAI++P+ L MP GLQ++G ++E L + + IE Sbjct: 409 LALTYRGSLAGGPAITLPSGLDHHGMPFGLQMLGALGQDERLLASAKAIE 458 >gi|194290634|ref|YP_002006541.1| amidase [Cupriavidus taiwanensis LMG 19424] gi|193224469|emb|CAQ70480.1| putative Amidase [Cupriavidus taiwanensis LMG 19424] Length = 463 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 205/471 (43%), Gaps = 48/471 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 + E++ ++ I N Q+NA E + A + R+ G+ L G+P+ +KD Sbjct: 21 LDPAEVIAAFQARIAARNDQLNAVFEQRQELVDADLAQLRARLAQGERPLLAGVPVIVKD 80 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 ++G S + F ++ ++L GA++LG N EFA YG Sbjct: 81 VIWSQGRRVTQGSQLYRDFIAPADAIAVERLRRAGAIVLGMGNTSEFACKGLTTNKVYGL 140 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 P +D+T T GGSSGG + AVA + ++GTD GGS R+P + G VG KP+Y Sbjct: 141 TRHP---LDAT--LTAGGSSGGCAVAVAAGMAPLALGTDGGGSSRRPPAHAGVVGFKPSY 195 Query: 201 GRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 G + FA + + + ITRTV D+ ++ +A+AG D D + +L Sbjct: 196 GAIP--DSVGFAHAFNGIQVIAPITRTVADAELIFEALAGTDPRDPDTLGF-------SL 246 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + T+ I RL +P D + ++Q ++ L+ AG I Q A A Sbjct: 247 GAARPLHTLKIAVSPRLGLDTPVDDDVAQAFEQAVARLQAAGLSIERADPAWPQGADEAA 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF-GQEVKHRIMIGTYVLSSR 373 + +NL D R V D+ E R + + G EV +R Sbjct: 307 LMPLQHVGLANL-YGDAWRRDPEVFDADVARQIE--RGLAWTGAEV------------AR 351 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF---PLGKEENNSGSMGHIY 430 ++ +R+I + FT D++L PTTP A+ LG E ++ Sbjct: 352 AREA----SRQIALAVAGFFTR-----YDLLLCPTTPCVAWRNDRLGPERIGGVAVEPRA 402 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + VFT N A PAISVP +P+GLQ+ G + ++ + ++ E Sbjct: 403 HAVFTPFFNHALAPAISVPCGSGRDGLPVGLQIAGPRGADRSVLAAARLAE 453 >gi|330820246|ref|YP_004349108.1| Amidase family protein [Burkholderia gladioli BSR3] gi|327372241|gb|AEA63596.1| Amidase family protein [Burkholderia gladioli BSR3] Length = 491 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 138/488 (28%), Positives = 217/488 (44%), Gaps = 51/488 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR----AAAEESDKR 62 M E D +R K +S VE + +Y+ IE N ++NA +VA + R A A + D Sbjct: 19 MPAHELSDAIRGKAVSCVETMRAYLDHIERVNGRVNA---IVALRERETLLAEAAQKDAA 75 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ + L GIP KD TK I T S I FRP +S ++ GA+ +GK Sbjct: 76 LARGEWQGWLHGIPQAPKDLAMTKDIVTTMGSPIFRDFRPAEDSVAVARMRAAGAIFIGK 135 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG +P + GGSSGG++AA+A L + G+D G Sbjct: 136 TNTPEFGLGSHTFNEVYGATRNP-----HDLGKSAGGSSGGAAAALAARLLPVADGSDFG 190 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA+F +G +P+ GR R + F G + RTV D A LL AG D Sbjct: 191 GSLRNPAAFCNVLGFRPSVGRVPRWPAVDVFYQQFGTDGPMARTVTDLARLLAIQAGRDA 250 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAK 298 DA ++ + + LD ++G + ++ YL+ P + + + L+ G + Sbjct: 251 RDALSLDDDPARFTQPLDADLRGKRIAWVGDWD-GYLATEPGVLALGEAALGTLRSIGCE 309 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + + LPA+ PA + R L G ++ + R E Sbjct: 310 VDAV--------LPAF---DPA----RIWRIWLAHRHLLAGGAALVHYRDPARRALLKPE 354 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + + + + + Y++ R ++ L+ FE D I PT FP Sbjct: 355 AVYEVEGLLAMKAEQVYEASAARTAWLQALMA-----MFEHH-DFIAAPT--AQVFPFDV 406 Query: 419 EENNSGSMG-------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 EE ++ H + + T +AG P ++VPA E +P G+QLIG+P R++ Sbjct: 407 EERWPKAIAGREMDSYHRWMETVT-PWTLAGCPVVNVPAGFNEAGLPTGIQLIGRP-RDD 464 Query: 472 TLFSVGQI 479 F+V Q+ Sbjct: 465 --FAVLQL 470 >gi|330923353|ref|XP_003300209.1| hypothetical protein PTT_11384 [Pyrenophora teres f. teres 0-1] gi|311325780|gb|EFQ91694.1| hypothetical protein PTT_11384 [Pyrenophora teres f. teres 0-1] Length = 532 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 141/493 (28%), Positives = 218/493 (44%), Gaps = 63/493 (12%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFA 83 E+V S+I IE +N + NA I + A A A+E D ++ G+A L IPI +KD + Sbjct: 26 EVVSSFIANIEANNKRTNAIISL-NPNALAIADEKDGQLSAGNATGPLFCIPILLKDNYD 84 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 T + T + L +P ++ + GA++LGK N+ E A+ + +S G I+ Sbjct: 85 TVDLPTTGGNLALARSQPTEDAPSVAAFKNAGAIILGKANLHELALEGISVSSLGGQTIN 144 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P+ DST GSSGG+ AAVA GTDT S+R PAS I+PT G Sbjct: 145 PY---DSTRTPG--GSSGGTGAAVAASFSVFGTGTDTVNSLRSPASANSLCSIRPTRGLI 199 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP----DYERAL 257 +R GII + + D G I RTV+D A L +A GYD D +P P DY +L Sbjct: 200 TRTGIIPISTTHDVIGPIARTVKDVATALTVMASTGYDAADNDTALVPGPFRGIDYASSL 259 Query: 258 -DQSIQGMTVGIPKEY--RLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + S++G+ +G+ + R D T ++K +S L G +V I+ T Y Sbjct: 260 SNPSLKGLRIGVLNGFFNRTDAPEVTPVNKAMDSVMSRLSAEGVALVPIN--ETIY---- 313 Query: 314 YYIISPAEASSNLARYDGVRYGLRV--------------EGKDILEMYENTRSIGFGQE- 358 A++ A YD R+ R + E+Y G G E Sbjct: 314 -------NATTIQAAYDVQRFEYRQLMDQYLERPSLGGEHPATLTELYSRKAINGSGGEF 366 Query: 359 --VKHRIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + + T L S ++ YL R IR L +D I+ P Sbjct: 367 LVIPSQYEYVTTALVSSTTNATYLDRQAGIRNLTLALLNTFTANSLDAIIYPEQKNLVVK 426 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFR 469 +G + SG G + + G P ++VPA + +P+G++++G+P+ Sbjct: 427 IGS-PSQSGRNG--------ILAALTGTPVVTVPAGFSDPSDEAPAGVPIGMEVLGRPWE 477 Query: 470 EETLFSVGQIIEK 482 E+ L +G +E+ Sbjct: 478 EQKLLRIGYAVEQ 490 >gi|163794069|ref|ZP_02188042.1| Amidase [alpha proteobacterium BAL199] gi|159180683|gb|EDP65202.1| Amidase [alpha proteobacterium BAL199] Length = 499 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 133/491 (27%), Positives = 225/491 (45%), Gaps = 41/491 (8%) Query: 1 MSELNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE 58 M+ L+ A+S E R R+ +K+IS VEL+++ I+ IE N +NA +AR A+ Sbjct: 1 MTSLSLTALSAVELRRRIGTKEISPVELLEACIERIEAVNPAVNAIAAKAYGRAREEAKV 60 Query: 59 SDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ ++ GDA L G+P+G+KD T+G+ T S + P +S + GA+ Sbjct: 61 AEAAVLRGDALGRLHGLPVGVKDLQDTEGVLTTHGSPLYRSHVPARDSAQIALVRAAGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + K N+ EF G+++ +G +P+ SSGGS+AA+A + G Sbjct: 121 VTAKTNVPEFGAGANSRNPVWGATGNPFNPTRIAGG-----SSGGSAAALACDMLPICTG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+R PA+ G VG +P+ G G + G + RTV D+ +L A G Sbjct: 176 SDTGGSLRIPAAICGVVGFRPSPGLVPMDGRQLGWTPISVLGPMGRTVADTRMLFAAQVG 235 Query: 238 YDECDATCVNLPV-PDYERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D D ++ P+ PD A + G + V ++ +S I ++ + ++ Sbjct: 236 VDSRDP--LSQPINPDAIVASRPADLGRLRVAWTTDFGQCPVSAEIRSVMRKRMDEMRHL 293 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + E++ + A A + LARY + YE R Sbjct: 294 FLTVDEVAFDFGE----ADRCFDVVRAQNFLARYR--------------DTYERDRE-QL 334 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G ++ IG + D+ + A + R I R F E F Q D+++ PTTP S FP Sbjct: 335 GPNIRANYEIGA---AMSLADAAWAHAEQTR--IFRRFQETF-QDYDLVMAPTTPVSPFP 388 Query: 416 ---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 L E + + Y+ + T + +A P+I++P + + MP GLQ++G+ + Sbjct: 389 WSELYLAELEGAPLKNYYHWLALTYVITLATNPSIALPCGVDDHGMPFGLQVVGRFGGDI 448 Query: 472 TLFSVGQIIEK 482 L + +E+ Sbjct: 449 ELLDASEAMER 459 >gi|17228730|ref|NP_485278.1| hypothetical protein all1235 [Nostoc sp. PCC 7120] gi|17130582|dbj|BAB73192.1| all1235 [Nostoc sp. PCC 7120] Length = 467 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 139/493 (28%), Positives = 219/493 (44%), Gaps = 58/493 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESD 60 ++L F E +R +++S +ELV+ Y+Q I+ N ++ +Y V A+ A A A+ +++ Sbjct: 4 TDLAFTPALELAQLIRRREVSPLELVEIYLQRIQLLNPELGSYFTVTAELAIADAKAKTE 63 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+PI IKD A G+ + L P ++ V ++ G +LG Sbjct: 64 LLTTTPELPQFFGVPISIKDLNAVAGVPCTYGNPALLNNIPQFDDGVVTRIKQAGFTILG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K E E + + P +PW ++TPGGSSGG++AAVA LCA + G+D Sbjct: 124 KTATSELGSFPYTEPTGFVPARNPWNL-----EYTPGGSSGGAAAAVAAGLCAIAQGSDG 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G VGIKP GR S+ + + G I RTV D+A LL A++GY Sbjct: 179 GGSIRGPAACCGVVGIKPARGRVSKAPVGDRLAGISTNGPIARTVADAAALLDAMSGYVT 238 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTI---DKTWQQG----ISW 291 D + P P + A P + R+ + + P + D QQG + Sbjct: 239 GDPYWLPDPEPSFLNAAQTP--------PTQLRIAFATDIPPLGEADANCQQGVLTTVKL 290 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L+ G I + SL + P + A S L +IL+ Sbjct: 291 LEQLGHHIEQKSLDLSGLVEPFQIVWQSGVAGSGLP-------------PEILQ------ 331 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++L+ + Y++A ++ R AF +DV++ P Sbjct: 332 ------------PVNRWLLARTGTVADYIQAVYKMQIVARQIV-AFFDNIDVLVLPVYLH 378 Query: 412 SAFPLGKEENNS--GSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 S +G+ S + I N V + N G PAI++PA +P+ +QLIG+P Sbjct: 379 SPIRVGEWAALSPEDTFQQIINWVAPCPLANATGQPAIALPAGFDRNGLPISVQLIGRPA 438 Query: 469 REETLFSVGQIIE 481 E TL S+ IE Sbjct: 439 AEATLISLAAQIE 451 >gi|224044015|ref|XP_002188597.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 528 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 137/498 (27%), Positives = 232/498 (46%), Gaps = 59/498 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESD 60 +F + + + +S ++ ++ + I +E+ S + A ++ ++ AE S Sbjct: 55 FSFKGIKDYLECYQSGKLTPSQVAKNIIAMLEDCDKSTPPLRAIVQWDQEQIMLMAEAST 114 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVM 118 R N L+GIP+ +K+ F H + + L G +P E +TV +KL + GA++ Sbjct: 115 TRYRNKCTLSCLDGIPVCLKEEFKVVPYHHRVGTVYL-GTQPETEDATVAKKLREAGAII 173 Query: 119 LGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +G NM E G++ N Y+ +P+ + + FT GGSS GS+AAVA LC +I Sbjct: 174 IGVSNMHELGTGTTGCNPNRYHKIPRNPY----NPNHFT-GGSSSGSAAAVAAGLCPVAI 228 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTD GGS+R PASF G VG+K T+GR S G + + S G I +V D+AI+ +A Sbjct: 229 GTDGGGSVRIPASFCGVVGLKGTFGRISCHGCLPLSYSTVSVGPICTSVADAAIVYSILA 288 Query: 237 --------GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 G + AT ++ PD ++G+ +G+ + + ++ Sbjct: 289 EPDLLYPYGLKQPKATLSDMCAPD--------LKGLKLGVDWTF-FKACDAEVLSACEKA 339 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMY 347 + L+ GA +VE+SLP + A A+ I +E +R L+ + K EM Sbjct: 340 VKHLQSLGASVVEVSLPEMEEARVAHVICILSE----------MRDFLQPDFNKHFHEMN 389 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 TR+ + L+S+ Y++A + RT R E F V+ ILTP Sbjct: 390 LETRA--------------SLALASQFTALDYIKANRQRTRSMRFLQEIFST-VNCILTP 434 Query: 408 TTPTSAFPLGKEENNSGS--MGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 P +A + + + +GS M + F N G+P + VP +P+ LQ++ Sbjct: 435 AVPCTAPRIYESDLLTGSSDMSFTVRSMRFMQLGNFTGIPGLVVPIGYSSAGLPISLQVM 494 Query: 465 GQPFREETLFSVGQIIEK 482 + + E L +G +E+ Sbjct: 495 AKWWDEAVLLRIGLKLEQ 512 >gi|284029441|ref|YP_003379372.1| amidase [Kribbella flavida DSM 17836] gi|283808734|gb|ADB30573.1| Amidase [Kribbella flavida DSM 17836] Length = 483 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 142/504 (28%), Positives = 218/504 (43%), Gaps = 43/504 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E N + LR+ ++++VEL + I IE + +NA +ARAAA +D Sbjct: 2 EWNLRTAEQLLVALRAGEVTSVELTEQAITRIEREDEVINAICVPDFDRARAAARSADAA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ R L G+P+ +K+ + G+ T P ++ +L GAV+LGK Sbjct: 62 RAGGEDRPLLGVPVTVKESYDIAGLPTTWGMPQYRAHVPAEDAVQVSRLRAAGAVLLGKT 121 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ + YG +PW TPGGSSGGS+AA+A A SIG+D GG Sbjct: 122 NVPLGLQDLQSFNEIYGTTNNPW-----NHARTPGGSSGGSAAALAAGFGALSIGSDIGG 176 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPSLDQA--GIITRTVRDSAILLKAI 235 S+R PA F G KPT G + G++ + LD A G + RT RD +LL + Sbjct: 177 SLRTPAHFCGVYAHKPTLGLVAPRGMVAPPGPALPVELDLAVVGPMARTARDLTLLLDVM 236 Query: 236 AGYDECD-ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 AG D +L +P A Q + V + E+ L + + L D Sbjct: 237 AGPDPLTLGVAYDLSLPP---ARHQRLSDFRVLVLDEHPLIPTGAAVRAGVNRVADALVD 293 Query: 295 AGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 GA +V S LP A Y + S ++AR+ +E YE ++ Sbjct: 294 GGAHVVRHSPLLPDLAEAGTLYLQLL---VSGSVARFP-------------IEAYEQLQA 337 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G R + + ++ A R L + + + F + D ++ P TPT Sbjct: 338 RAAGLSADDRSLDAARLRGMVFSHRDWMEANSRRELHRHGWRQLFAE-FDAVVCPITPTP 396 Query: 413 AFP-------LGKEENNSGSMGHIYND-VFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 AFP L + + G ++ V+ M GLPA +VPA L +P+G+QLI Sbjct: 397 AFPHDPNPDLLERRIDIDGVEYPFFDQLVWAGLATMPGLPATAVPAGLSPDGLPVGVQLI 456 Query: 465 GQPFREETLFSVGQIIEKEAGYFR 488 G F + T + +++E G F+ Sbjct: 457 GPTFEDRTPLRLAELLEPRIGGFQ 480 >gi|115523813|ref|YP_780724.1| amidase [Rhodopseudomonas palustris BisA53] gi|115517760|gb|ABJ05744.1| Amidase [Rhodopseudomonas palustris BisA53] Length = 449 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 133/472 (28%), Positives = 206/472 (43%), Gaps = 59/472 (12%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEV-VAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 SA +LVD + I ++ + A+I V A AA R N GIPI +K Sbjct: 20 SARKLVDQCLGKIADTGGEGARAFIHVDTAAAIAAAEAMDALRKANAAPSAFAGIPIAVK 79 Query: 80 DCFATKGIHTQACSHILD-GFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F KG T+A S LD R ++ +L G V++G+ NM EFA +Y Sbjct: 80 DLFDIKGQVTRAGSRALDDNPRAEADAPAVARLRRAGFVVIGRTNMTEFAYSGIGINPHY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G W+ PGGS+ G + AV + ++GTDTGGS R PA+F G VG KP Sbjct: 140 GTPKGAWQRAIG---HVPGGSTSGGAVAVVDGMAHGALGTDTGGSCRIPAAFNGLVGFKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T R R G + + +LD G + R+V+ A L D+ + P+ + Sbjct: 197 TQSRVPRDGAVPLSFTLDSVGPLARSVQCCATL----------DSVLADQPLAELT---P 243 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 +S+QGM + +P LD L + + +++ + L AGA I I +P + + Sbjct: 244 RSVQGMRLAVPTTMVLDDLDDAVAQAFERTLEALSRAGALIERIEVPE-------FLDVV 296 Query: 319 PAEASSNLA---RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 P A A Y RY + G ++Y+ V+ RI+ G ++ Sbjct: 297 PMSAKGGFAAAESYAWHRYLIVAHG----DVYD--------PRVRDRILRGESQSAADYV 344 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT---TPTSAFPLGKEEN-NSGSMGHIYN 431 D + ARK +L++R + A D I+ PT TP L ++ ++ + N Sbjct: 345 D--LVSARK--SLVER--STARLSPYDAIVLPTAANTPPKIADLADDKAFTKANLLALRN 398 Query: 432 DVFTVAVNMAGLPAISVPAALC--EKKMPLGLQLIGQPFREETLFSVGQIIE 481 +NM AIS+P C E ++P+GL L + +F + +E Sbjct: 399 CTL---INMIDGCAISLP---CHREGEVPVGLMLASTAGTDRRIFDLAAGME 444 >gi|242221543|ref|XP_002476518.1| predicted protein [Postia placenta Mad-698-R] gi|220724226|gb|EED78285.1| predicted protein [Postia placenta Mad-698-R] Length = 561 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 106/321 (33%), Positives = 164/321 (51%), Gaps = 28/321 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAE 57 + +L +V E + L ++V+LV +Y IE N Q + A IE AA Sbjct: 47 LPDLYEASVIELQAGLEGGYFTSVDLVKAYFARIEEVNLQGPELRAVIETNPSALAQAAA 106 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFAT---KGIHTQACSH-ILDGFRPHYESTVTQKLWD 113 +R G L GIP+ +KD AT +G++T A S+ +L P ++ V ++L Sbjct: 107 LDAERRATGPRSALHGIPVLVKDNIATLASEGMNTTAGSYSLLRSIVPD-DAGVVKRLRA 165 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPW--RSMDSTDKFTPGGSSGGSSAAVAGF- 170 GA++LGK N+ EFA + G + S W R T+ + P GSSA Sbjct: 166 AGAIILGKANLSEFA-------HFRGNLASGWSGRGGQCTNAYFPHADPCGSSAGSGVSA 218 Query: 171 ---LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 L A ++GT+T GSI PA VGIKPT G SR G+I + D G + R+V D Sbjct: 219 SIGLAAVTLGTETDGSITCPADRNNIVGIKPTVGLTSRAGVIPISEHQDTVGPLVRSVAD 278 Query: 228 SAILLKAIAGYDECDATCVN--LPVPDYERALDQ-SIQGMTVGIPKEYRL-DYLS---PT 280 +AI+L IAG D D + +PVP+Y ALD+ ++QG +G+P+ L D ++ P Sbjct: 279 AAIVLSIIAGPDPNDNFTLAQPVPVPNYALALDRNALQGKRIGVPRAVFLNDTITGNDPY 338 Query: 281 IDKTWQQGISWLKDAGAKIVE 301 +++ ++Q ++ + GA +V+ Sbjct: 339 VNEVFEQALATIASLGATVVD 359 >gi|260813971|ref|XP_002601689.1| hypothetical protein BRAFLDRAFT_94569 [Branchiostoma floridae] gi|229286991|gb|EEN57701.1| hypothetical protein BRAFLDRAFT_94569 [Branchiostoma floridae] Length = 510 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 108/429 (25%), Positives = 189/429 (44%), Gaps = 55/429 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G + IKD A G+ + D ++ GK ++ M Sbjct: 116 LQGKTVAIKDNVAVAGV----------------------PMMDGSGMIKGKSVCEDLCMS 153 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ TS GPV++ + D+T + S + A+ A IG D GGSIR PA++ Sbjct: 154 GNSFTSATGPVLN---AHDNTRSSSGSSSGSATLLALKEVDLA--IGGDQGGSIRLPAAW 208 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC--DATCVNL 248 +G VG KPT+G G + ++D G + RTV D+A++L+ +AGYD+ NL Sbjct: 209 SGVVGHKPTHGLVPYTGCVPMDITIDHVGPMARTVADTALMLEVLAGYDDGLDPRQPPNL 268 Query: 249 PVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 VP+Y L + G+ VG+ KE + + +D ++ L AGA + E+S+P Sbjct: 269 TVPEYTSQLTGDLSGIRVGLLKEGFGQETSEADVDDMVREAAHKLTSAGATVEEVSVPL- 327 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLR----VEGKDILEMYENTRSIGFGQEVKHRI 363 Y ++ + + +GV G + D N+R +KH Sbjct: 328 -----HYPDVAIQGTMQTMMKGNGVGVGWKGFYPTSMVDAFTRGYNSRGNDMSAALKHVA 382 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++G + L + +Y + + + + + + EA + DV++ PT P L E+ + Sbjct: 383 LLGEF-LDENYGNRYYAKGQNLVRTLTKAYNEALDTH-DVLIMPTIPFKPLKLPDEDASI 440 Query: 424 GSMGH----------IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + H I+N T N+ G P +S+ A + +P+G+ ++G+ F + T+ Sbjct: 441 SEICHQALGSKEVSLIHN---TCPSNVTGHPGLSINAGFSQPGLPVGMMIVGRHFDDATV 497 Query: 474 FSVGQIIEK 482 V EK Sbjct: 498 LKVAHAFEK 506 >gi|134095304|ref|YP_001100379.1| amidase [Herminiimonas arsenicoxydans] gi|133739207|emb|CAL62256.1| Putative amidase [Herminiimonas arsenicoxydans] Length = 427 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 130/460 (28%), Positives = 205/460 (44%), Gaps = 63/460 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+ ++ + K IS+VELV+ ++ I++ + A+ + A A D + + G Sbjct: 1 MSARDAATAIAEKKISSVELVEECLKRIDSREEVVGAWAYIDRDLAIKEASLRDSQHVQG 60 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+PIGIKD T + T+ S I G RP E++ + G V+LGK E Sbjct: 61 P---LHGVPIGIKDVIDTIDLPTEYGSTIYAGHRPRREASCVSLVRRAGGVILGKTVTTE 117 Query: 127 FAMGSSNETSY-YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 FA+ +T+ + P TPGGSS GS+AAVA F ++GT T GSI Sbjct: 118 FALYQPGKTTNPHNPA------------HTPGGSSSGSAAAVADFHVPVAMGTQTSGSII 165 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +PAS+ G VG KPT+ + G A SLD G +TRTV D ++ + G +T Sbjct: 166 RPASYCGVVGYKPTFNTFALEGTKPLAASLDTLGYLTRTVDDLTLMREVFLGKSAVKSTF 225 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 N P A+ +S P Y + T+ ++Q L ++G I E+ LP Sbjct: 226 NNRP----HIAICRS--------PFWYEATADTRTV---FEQTAELLANSGFDIEEVDLP 270 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 P++ + + L Y+ R +R D+ +E G + + I Sbjct: 271 ------PSFSDL--IDVHEKLMAYEIARNYVR--EFDVSVRHE------LGPKTRQVIED 314 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G +V + YLR R + T RD AF D ++ P P ++ Sbjct: 315 GWHVST-----DEYLRLRAV-TRHARDKFAAFSNEFDAVMVPAAP----------GDAPD 358 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + N +F+ ++ G PAI++PA E +P+G+Q + Sbjct: 359 ISATGNPIFSRVWSLLGTPAIALPAGAGESNLPVGVQFVA 398 >gi|325925356|ref|ZP_08186758.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Xanthomonas perforans 91-118] gi|325544234|gb|EGD15615.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Xanthomonas perforans 91-118] Length = 549 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 150/298 (50%), Gaps = 12/298 (4%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 R+ S S+++L +Y+Q I+ + ++NA IE+ Q A A A D G R Sbjct: 47 RMASGQSSSLQLTRAYLQRIAGIDRAGPRLNAVIELNPQ-AEADARALDAERKAGHVRGP 105 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + A S L FRP ++ + Q+L GAV+LGK N+ E+A Sbjct: 106 LHGIPVLLKDNIDALPMVNSAGSLALAEFRPARDAFMVQRLRTAGAVILGKTNLSEWANF 165 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ++S P GSS G+ AA+A L IGT+T GSI P S Sbjct: 166 RSTQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAASLATVGIGTETDGSITCPTSV 225 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA D D P Sbjct: 226 NGLVGLKPTVGLISRDGIIPISASQDTAGPMTRSVADAAAVLQAIAAPDPQDPATAKAPA 285 Query: 251 P--DYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 DY L S++G +G+ + R D PTI + + L+ AGA +VE +L Sbjct: 286 TSVDYLAHLKPDSLRGARLGLLRNPLRED---PTIAAVLDRAVQTLRAAGATVVETAL 340 >gi|126641819|ref|YP_001084803.1| putative hydrolase [Acinetobacter baumannii ATCC 17978] Length = 403 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 115/428 (26%), Positives = 193/428 (45%), Gaps = 51/428 (11%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GI I +KD G A + L F+P + + QKL D+GA+++GK NM E A G + Sbjct: 2 GILIAVKDNIHVAGFPNSAGTPALADFKPQSSAPIIQKLIDHGAIIVGKTNMHELAFGVT 61 Query: 133 --NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 N + V+ +++ GGSS GS+ AVA + SIGTDTG SIR P++ Sbjct: 62 GYNTAMHIEGVVGTRNAVNPL--HIAGGSSSGSAVAVAAGMVPISIGTDTGASIRLPSAL 119 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG +PT GR S+ I + + D AG I TV D ++ + I + + N Sbjct: 120 NGCVGFRPTVGRYSQESITPISHTRDTAGPIAHTVSDIILIDQLITQEPKKEPLQPN--- 176 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + +GI Y ++L + + + LKDAG +I+ + +P+ + Sbjct: 177 ------------QIRLGI-NPYFWNHLDEDVHEQAHIALGLLKDAGVEIIPVDMPNLEQL 223 Query: 311 LPAYYIISPAEASSNLARYDGVRY------GLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + I P +YD ++Y L +E + ++I F Q + +++ Sbjct: 224 --NHAISFPVVVYE--GKYDLIQYLKDHHVNLTIETVVDQISSPDVQAI-FKQNILPQLI 278 Query: 365 ---IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEE 420 G V Y ++R + + F+ + +L PT+P A PL E+ Sbjct: 279 QDHTGHLVPVLPFYQK---AINEVRPQLLELYQNTFKAHNLHALLLPTSPIVA-PLANEQ 334 Query: 421 NNSGSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEK-KMPLGLQLIGQPFREETLF 474 +NS + T+ N GLP +S+P K K+P+GL++ G P ++ + Sbjct: 335 SNS------IENFQTLIRNTDPGSNIGLPGLSLPIGKGAKSKLPVGLEIDGLPHQDSEIL 388 Query: 475 SVGQIIEK 482 ++G +E+ Sbjct: 389 AIGVTLEE 396 >gi|260427230|ref|ZP_05781209.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Citreicella sp. SE45] gi|260421722|gb|EEX14973.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Citreicella sp. SE45] Length = 475 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 129/478 (26%), Positives = 215/478 (44%), Gaps = 40/478 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 AVS D LRS +S V L+++ + IE N Q+NA + + + A + R +N Sbjct: 15 AVSLVSD-LRSGALSPVALMEAVLDRIEAVNPQVNAIVSLRPRDELLA----EARAVNAT 69 Query: 68 AR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G+PI +KD ATKG+ T S + F P + V +L GA+++GK N E Sbjct: 70 SGGPLAGLPIAVKDLVATKGLRTTWGSPLFADFIPAADDLVAARLRAAGAILIGKTNTPE 129 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + GS + +GP +P+ S SSGG+ AA+A + + G+D GS+R Sbjct: 130 WGHGSHSFNPVHGPTRNPYDLGRSAGG-----SSGGAGAALAARMLPLADGSDMMGSLRN 184 Query: 187 PASFTGTVGIKPTYGRCSRLGI-ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G +P++G + +F +L G + R+ RD A+LL +AG + C Sbjct: 185 PAAFNNVYGFRPSWGLVPKDAEGDTFLSTLATEGPMGRSPRDVALLLSVLAGPNPDVPFC 244 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL 304 P DY S++G +G + Y + P I +T + ++ ++ GA IVE Sbjct: 245 --RPAEDYTARFGDSLRGKRIGWLGNWGGAYATEPGILETCEAALAVFEELGA-IVEPLA 301 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P P A + + +R GL K + R++ E I Sbjct: 302 P-------------PFPAEKLWSSWTTLRAGLNAGAKRAFATDPDKRAL-TKPESLWEID 347 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENN 422 G + + Y+ A K+R+ + FE+ D + P+ FP+ ++ Sbjct: 348 QGMTLSAEAFYE-----ASKLRSAWYKRAARTFER-FDALALPSAQVWPFPVDWRWPQDI 401 Query: 423 SGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +G Y+ V V++AGLP + +PA +P+G+QL G + + ++G Sbjct: 402 AGRKMDTYHRWMEVVVPVSLAGLPCLGLPAGFSASGLPMGMQLFGPTGSDAAILAMGD 459 >gi|258542380|ref|YP_003187813.1| amidase [Acetobacter pasteurianus IFO 3283-01] gi|256633458|dbj|BAH99433.1| amidase [Acetobacter pasteurianus IFO 3283-01] gi|256636517|dbj|BAI02486.1| amidase [Acetobacter pasteurianus IFO 3283-03] gi|256639570|dbj|BAI05532.1| amidase [Acetobacter pasteurianus IFO 3283-07] gi|256642626|dbj|BAI08581.1| amidase [Acetobacter pasteurianus IFO 3283-22] gi|256645681|dbj|BAI11629.1| amidase [Acetobacter pasteurianus IFO 3283-26] gi|256648734|dbj|BAI14675.1| amidase [Acetobacter pasteurianus IFO 3283-32] gi|256651787|dbj|BAI17721.1| amidase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654778|dbj|BAI20705.1| amidase [Acetobacter pasteurianus IFO 3283-12] Length = 451 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 213/481 (44%), Gaps = 68/481 (14%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLE 72 + +RS SAV ++ + + + + + + A +A A++ D R L Sbjct: 12 EAIRSGKKSAVSIIQETLNTLRTQDHGIQSVTHLFADEALLQAQKIDAMRQAGQTLPPLA 71 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P G+KD F G T A S +L P ++T+ Q+L GA+ + LNMDEFA G Sbjct: 72 GVPFGVKDLFDIAGHVTTAGSIVLRNMPPAQKDATIVQRLKAAGAIPVATLNMDEFAYGF 131 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + ++YG +P + G S G ++A AGFL A +G+DT GSIR PAS Sbjct: 132 ATVNAHYGTTHNP----HDLARMAGGSSGGSAAAVAAGFLPFA-LGSDTNGSIRIPASLC 186 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G GIKPT+GR R G F+ SLD G ++ D + G + P P Sbjct: 187 GVWGIKPTFGRLPRAGAYPFSASLDVVGSFASSLDDLITTFYVMDG---------STPAP 237 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 E A D + V + L+P + + + L+ + LP A Sbjct: 238 --EPAADT----LRVSKLGGWFASNLAPELVAALDRVCASLQTTS----TVELPEVASAR 287 Query: 312 PAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A ++I+ AE + +L R LR + ++ + + R++ G + Sbjct: 288 AASFLITAAEGGNLHLPR-------LRKQAEE------------YDPATRDRLIAGALLP 328 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---------GKEEN 421 SS YL+A++ R + E F Q DV++ P A PL GK + Sbjct: 329 SST-----YLQAQRFRNWFRTKIHELF-QKTDVLIAPAVMGEA-PLLDAPTIMVDGKPVS 381 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++G +FT +++ GLP + +P +PLGLQL+ P +E LFSV + ++ Sbjct: 382 ARANLG-----LFTQPLSLPGLPVLCLPLK-NTGSLPLGLQLVAAPGQEAALFSVARALK 435 Query: 482 K 482 + Sbjct: 436 Q 436 >gi|316935110|ref|YP_004110092.1| amidase [Rhodopseudomonas palustris DX-1] gi|315602824|gb|ADU45359.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 477 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 119/471 (25%), Positives = 200/471 (42%), Gaps = 35/471 (7%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+S +++ +E++D I + +NA + +AR A E K+ + L G+ Sbjct: 18 KLKSGEVTPIEVLDVLEARIAEVDGAVNALPTLCFDRARGHAAELMKKP-PAERGVLAGL 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD A G+ T S I P + + L NG V+ K N EF G++ Sbjct: 77 PVPIKDLTAVAGVLTTQGSPIFKDVVPARSDLMVEHLEANGGVVYAKSNTPEFGAGANTF 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW S G + + A+ +L + G+D GGS+R PASF G V Sbjct: 137 NEVFGATRNPWDL--SRSAAGSSGGAAAALASGTAWL---AHGSDMGGSLRNPASFCGIV 191 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++P++GR + + +L G + R V D A+LL A++G D + P + Sbjct: 192 GLRPSFGRVAHTPVAKIDRNLGVQGPMARNVEDVALLLDAMSGEYAADPLSIPSPATSFL 251 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 A + + V + + + P + + +AG IVE + P A Sbjct: 252 SAARSRRKPLRVAYSPDLGITPVDPEVAAITAKAAERFAEAGV-IVEQAQPDLSEA---- 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 E L +D + D+L T+ EV I G L Sbjct: 307 -----HECFQALRAFD-----FAISKADLL----RTKRDLLKPEVIWNIEQG---LKLSV 349 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE---ENNSGSMGHIYN 431 D A+++ + T AF Q D++L P T T+AFP+ + E N + G+ Sbjct: 350 DDLARAEAQRVAMTAR---TLAFFQTYDLLLCPATITAAFPVEQRYLAECNGHTFGNYVE 406 Query: 432 DV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + A+ + PA+S+P +P+GLQ++ +P E L + ++E Sbjct: 407 WLGIAYAITLVCCPALSLPCGFTSAGLPIGLQMVAKPRNEAGLLAGAAVLE 457 >gi|330872067|gb|EGH06216.1| amidase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 514 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 135/496 (27%), Positives = 226/496 (45%), Gaps = 59/496 (11%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ ELV +Q IE N+ Q+NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGSLTSAELVQDLLQRIEALNNNGPQLNAVIEVNPDALQIAAQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G +++ V ++L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNINTGDKMQTTAGALAMVGSPAPHDAFVVKRLREAGAIIIGK 161 Query: 122 LNMDEFAM--GSSNETSYYG---PVISPWR-SMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 N+ E+A G + + + G + P+ S+D P GSS GS+ +A + Sbjct: 162 ANLSEWAFFRGENPPSGWSGRGGQTLHPYNLSVD------PRGSSTGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA G VG++PT G SR G+I D G + R+V D+AI+L A+ Sbjct: 216 LGTETNGSIIQPAQTNGVVGLRPTLGLLSRTGLIPLTRRQDTPGPMARSVTDTAIMLTAM 275 Query: 236 AGYDEC-DAT------CVNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQ 286 +G D DAT VN ++ +++G +G P RL + S D +Q Sbjct: 276 SGTDPLHDATGQASTDTVNY----FDHLSTDALRGKRLGYP---RLTWDDKSMDDDPDFQ 328 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + L+ AGA +V I +P + P + ++ + L Y R GL V D + Sbjct: 329 KAKISLQSAGAILVPIDVPDIDNS-PEFGVML-QDFKRELNAYLNTRPGLEVSTLDDIIA 386 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 + NT S Q ++I + S+ D YL D +Q +D ++ Sbjct: 387 F-NTASPST-QVYDQNLLIQS---SNTPVDPDYLSK-------ATDLRNVNQQLIDGLV- 433 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 ++++ ++ + F +AG P I+VP + MP GL + + Sbjct: 434 ------------QQHSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSK 481 Query: 467 PFREETLFSVGQIIEK 482 + E L S +E+ Sbjct: 482 AWDEANLLSYAYALEQ 497 >gi|320325381|gb|EFW81447.1| amidase [Pseudomonas syringae pv. glycinea str. B076] gi|320327474|gb|EFW83486.1| amidase [Pseudomonas syringae pv. glycinea str. race 4] Length = 446 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 50/421 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD +G+ A + + GF ++ + +L GAV+ GK NM E + G Sbjct: 63 LWGVPVSFKDNICVRGLPLTAGTRGMSGFVADQDAAIVSQLKALGAVVAGKNNMHELSFG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ++G V +P + GGSSGGS+ AVA + S+GTDTGGSIR PA+F Sbjct: 123 VTSINPHWGAVGNP-----VAPGYCAGGSSGGSAVAVASGIVPLSVGTDTGGSIRIPAAF 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G +PT GR S GII + + D G++TRT D+ + ++G + P Sbjct: 178 CGITGFRPTTGRWSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSGKQQSFPLSRTGPC 237 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI------SL 304 +G+P D L +++ +S L+ G + VEI L Sbjct: 238 --------------RIGLPVSMWSD-LDGEVERACVNALSLLRKTGFEFVEIDDADIVEL 282 Query: 305 PHT-QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 T + +P Y + A++ +L G+ + I ++ G + H Sbjct: 283 NQTLTFTVPLYEFFADFAQSLLSLGWNHGIHH--------IFAQVDDANVKGI---INHH 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEEN 421 + G HYL A + L+KR E F ++++ PT P L + Sbjct: 332 LGEGAI------KPGHYLSALQNGALLKRKMDELFARHHIELLGYPTVPCRVPHLDHADR 385 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I N T + A LP+I++P + ++P+GL R+ L S +IE Sbjct: 386 PEFFSQAIRN---TDLASNAMLPSITIPVG-PKGRLPVGLSFDAPRARDAFLLSSVSVIE 441 Query: 482 K 482 K Sbjct: 442 K 442 >gi|158424258|ref|YP_001525550.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331147|dbj|BAF88632.1| amidase [Azorhizobium caulinodans ORS 571] Length = 436 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 207/471 (43%), Gaps = 62/471 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ L+ S I IE + + A++ + KA A A E DKR G L G+PIG+KD Sbjct: 20 LTSEALLRSCIARIEARDPVVKAWLYLDKAKAIATARELDKRPPMGP---LHGLPIGVKD 76 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 T + T S + +RP ++ +GAV+LGK + EFA + Sbjct: 77 MIDTADMPTTYNSPVFQDYRPARDAACVAVARYSGAVILGKTDTVEFAAAGRRAAT---- 132 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 TPGGSS GS AAV + GT TGGS +PASF G G+KPT+ Sbjct: 133 ------RNPKNPAHTPGGSSSGSGAAVGDRQVQLAFGTQTGGSHIRPASFNGIYGMKPTW 186 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 G SR G +A LD G R+V D A++ A +D + + +P S Sbjct: 187 GTVSREGAKQYANMLDTIGWYGRSVADLALVGSAFRLHDVGE---IGIP----------S 233 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 + G+ V I + D + P + L+ AGAK+++++LP PA+ + Sbjct: 234 VAGLRVAICRTPFWDQIEPAGAAALEIASKRLEKAGAKLIDLTLP------PAFDGMF-- 285 Query: 321 EASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 EA + + +G R D+ + + F V +++ I + L Sbjct: 286 EAQNTIMMAEG-----RASFLDVALEFGERLHVDFHDRVNNKLEI---------TPENLL 331 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 A + +R F EA DV+LTP P A E + HI+N ++T + Sbjct: 332 AAYNLAAGCRRAF-EALYADFDVVLTPAAPGEA-----PEGTYNTGNHIFNAMWT----L 381 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ----IIEKEAGYF 487 +P + +P +P+G+Q++ + + L ++G+ II++E + Sbjct: 382 LHVPCLGIPCTTGPTGLPVGVQIVAPRYGDARLLALGEAMAPIIDEETALY 432 >gi|331702479|ref|YP_004399438.1| amidase [Lactobacillus buchneri NRRL B-30929] gi|329129822|gb|AEB74375.1| Amidase [Lactobacillus buchneri NRRL B-30929] Length = 489 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 136/523 (26%), Positives = 221/523 (42%), Gaps = 80/523 (15%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+ + +E + +R + V LV I +E +N ++NA + +A+ A + Sbjct: 4 THLSSYSATELSELIRQGKLDRVALVQELIDTVEQNNPKLNAVTTLWGDRAKKMASQ--- 60 Query: 62 RIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 N + G+PI +K + KG S +L ++ + + Q G + +G Sbjct: 61 --FNDTGQPFAGVPILLKGLGQSFKGEPDTGSSMLLKDYKSNITNNFVQAFLKAGLIPVG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N EF + ++ YG +PW + + PGGSSGGS+AAV + G D Sbjct: 119 ETNAPEFGFKNVTDSRLYGDAHNPWNT-----DYQPGGSSGGSAAAVGADWLPIAGGNDG 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAIL 231 GGSIR P+SF+GT+G+KPT GR + I+FA ITR + D+A L Sbjct: 174 GGSIRIPSSFSGTIGLKPTRGRVPTGPGEWRGWQGASINFA--------ITRDMNDTARL 225 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ---QG 288 L AI+ V LP + L+ + +T+ E + +P D+ Q Sbjct: 226 LDAISTVQMAAPFQVPLPAASFTETLNSLPKTLTIAYSTESPVG--TPVSDEAKQAVMDA 283 Query: 289 ISWLKDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + +L D G ++ P L +YY+++ E ++ A + KD + + Sbjct: 284 VQFLTDEGYDLIPADAPIDGVGLMKSYYLMNAGETATMFA---------NMHLKDDV-IK 333 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 EN + + R + Y +A I D +AF+Q D+ LTP Sbjct: 334 ENVEPLTWALGYAGRAVTAV----------QYSQALTFWDNIVSDM-DAFQQEFDLYLTP 382 Query: 408 TT----PTSAFPLGKEENNSGSMGHIYN--------------------DVFTVAVNMAGL 443 TT P PL EN + M HI FT N++G Sbjct: 383 TTAHQAPRIDQPLVSAENLT-KMKHIEELNPEEQMQLIWDQWLPALTLSPFTQLANISGQ 441 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 PAIS+P + E +PLG+Q + + RE+ L +G+ E + Sbjct: 442 PAISLPTYVGENGLPLGIQFMARKGREDLLLQMGKFFEDNQKF 484 >gi|220908629|ref|YP_002483940.1| allophanate hydrolase [Cyanothece sp. PCC 7425] gi|219865240|gb|ACL45579.1| allophanate hydrolase [Cyanothece sp. PCC 7425] Length = 607 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 119/432 (27%), Positives = 186/432 (43%), Gaps = 46/432 (10%) Query: 55 AAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWD 113 A E DK + L GIP IKD G T A C + P + V +KL Sbjct: 58 ALEGQDKNL------PLYGIPFAIKDNLDWAGTPTTAGCPEF--AYIPKRSAPVVEKLIA 109 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA+ +GK N+D+FA G + YG +P+ + PGGSS GS+ AV+ L + Sbjct: 110 AGAIPIGKTNLDQFATGLVGTRTPYGICRNPFH-----QNYIPGGSSAGSAVAVSAGLVS 164 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 +GTDT GS R PA+FT VG+KP+ G S G++ SLD I + T ++ LL+ Sbjct: 165 FGLGTDTAGSGRVPAAFTNIVGLKPSRGYLSTTGLVPAVRSLDCVSIFSLTCEEARYLLE 224 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWL 292 + +D D P P L++ + +G+P L++ + + +++ ++ L Sbjct: 225 LVGEFDPADP-FARRPEPIEVPRLNE----LRIGVPAAAELEFWGDRSTEAVYREALARL 279 Query: 293 KDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + G +I EI P + L Y E + RY V + ++ Y T Sbjct: 280 ESLGCQIREIDFAPFRETGLLLY------EGAWLAERYAAV--------GEFIQAYPQT- 324 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ + YD+ R R TE Q +D++ PTT T Sbjct: 325 --------TLDPVVAGIIQKGGEYDAVAAFRGMYRLAELRRQTEPQWQQMDLLAVPTTGT 376 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + + + H+ +T VN+ L A++VPA +P G+ LI + E Sbjct: 377 IYSRMAVKSDPIKLNSHLGR--YTNFVNLLDLSALAVPAGFQTNGLPAGMTLIAPAWGEP 434 Query: 472 TLFSVGQIIEKE 483 L SVG E + Sbjct: 435 LLLSVGTAFETQ 446 >gi|160900874|ref|YP_001566456.1| amidase [Delftia acidovorans SPH-1] gi|160366458|gb|ABX38071.1| Amidase [Delftia acidovorans SPH-1] Length = 493 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 222/480 (46%), Gaps = 58/480 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIP 75 R + +S VE++ + ++ + A + + A A A S+ R + G+ A L+G+P Sbjct: 21 RERSLSPVEVMHELLAHVQRWEPALGATYLLRPEAALAQARASEARWLRGEPAGLLDGVP 80 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD AT+G T + ++ +L + GA++ K M ++ M SS + Sbjct: 81 ATVKDNIATRGDPTPVGTAATPQVAAPLDAPPAARLREAGAILFAKTTMPDYGMLSSGLS 140 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S +G +PW DK TPGGSS G+ AA A +GTD GGSIR PA + G G Sbjct: 141 SLHGNTFNPW----DPDK-TPGGSSAGAGAAAAAGYGPLHVGTDIGGSIRLPAGWCGIFG 195 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KP+ GR I + AG +TR+V D+A++++A++ D D+ + LP D Sbjct: 196 LKPSLGRVP----IDPPYTGRCAGPMTRSVADAALMMQALSLPDARDS--MGLPHQDIAW 249 Query: 256 A---LDQS-IQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + +D + ++G+ +G+ LD L P + +Q +WL+ AGA I Sbjct: 250 SGFDMDPAQVRGLRIGL----LLDAGCGLPLQPRVRAVVEQAAAWLETAGAHI------- 298 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 II P L DG+ + R+ ++ + + ++ Sbjct: 299 --------EIIQPWLTRDML---DGLDHFWRMRSHVEMQSLPDAQRRVVLPFIRDWADSA 347 Query: 367 TYVLSSRCY----DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + +++ + SH LR +R T AF D +L+P P +AFP Sbjct: 348 GSITATQLFVASQQSHLLRVATVRA------TAAF----DYVLSPVAPITAFPAHLPSPT 397 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + + + FTV NM+ PA SVP + ++P+G+Q+ G+ F + + + +++E+ Sbjct: 398 NDPLRPLEHIAFTVPYNMSEQPAASVPCG-HDGQLPIGVQIAGRRFDDLGVLRLSRVLEQ 456 >gi|254688859|ref|ZP_05152113.1| amidase [Brucella abortus bv. 6 str. 870] gi|256257107|ref|ZP_05462643.1| amidase [Brucella abortus bv. 9 str. C68] gi|260754343|ref|ZP_05866691.1| amidase [Brucella abortus bv. 6 str. 870] gi|260883368|ref|ZP_05894982.1| amidase [Brucella abortus bv. 9 str. C68] gi|297247954|ref|ZP_06931672.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Brucella abortus bv. 5 str. B3196] gi|260674451|gb|EEX61272.1| amidase [Brucella abortus bv. 6 str. 870] gi|260872896|gb|EEX79965.1| amidase [Brucella abortus bv. 9 str. C68] gi|297175123|gb|EFH34470.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Brucella abortus bv. 5 str. B3196] Length = 438 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 124/428 (28%), Positives = 186/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 46 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 105 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 106 TPVGLNPHYG---EPGNAIDPA--LIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 160 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 161 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 218 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 219 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 267 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 268 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 318 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 319 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 354 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 355 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 412 Query: 475 SVGQIIEK 482 + IEK Sbjct: 413 AAALSIEK 420 >gi|222153168|ref|YP_002562345.1| amidase [Streptococcus uberis 0140J] gi|222113981|emb|CAR42281.1| putative amidase [Streptococcus uberis 0140J] Length = 485 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 134/519 (25%), Positives = 235/519 (45%), Gaps = 72/519 (13%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 +N+ + D +R K+++ +ELV + I + N Q+NA +V+ + A EE+ R Sbjct: 2 INYQDATAMADAVRHKEVTPLELVQTAISKAKELNPQLNA---IVSTRYEEALEEAKNRE 58 Query: 64 INGDARDLEGIPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G G+PI IKD G+ + S + ST ++L D G ++LGK Sbjct: 59 FSG--LPFGGVPIFIKDLGQELTGMPATSGSALFQNNISKITSTYVKRLQDLGFIILGKS 116 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ EF + +++ GPV ++ GGSSGG++ + + S +D GG Sbjct: 117 NVPEFGFKNISDSKANGPV-----NLSFDHSRNAGGSSGGAATLITSGVTTISAASDGGG 171 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYD 239 SIR PASF G +G+KP+ GR G SF S A + +T++VRD+ LL + Sbjct: 172 SIRIPASFNGLIGLKPSRGRIPT-GPTSFR-SWQGASVHFALTKSVRDTKTLLYHL---Q 226 Query: 240 ECDATCVNLPVPDY-ERALDQS-IQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 +C P+P E+ L Q+ ++ + V + +++ + S +++ + ++L G Sbjct: 227 DCQMEG-PFPLPKLSEKDLFQTPLKPLKVALLTQDWHGNAFSDHVNQALNKAATFLASQG 285 Query: 297 AKIVEIS-LPHTQYAL-PAYYIISPAEASSNLARYDGVR--YGLRVEGKDILEMYENTRS 352 ++ I LP AL +YY ++ AE + A +D + G VE D+ Sbjct: 286 HEVTPIKDLPLDMEALIDSYYFMNAAETA---AMFDQIEEAIGRPVEKTDM--------- 333 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + + I+ L ++ Y S + A + I F + D+++TP T Sbjct: 334 ----ETMTWAILQAGQDLPAKDY-SRIISAWDTYSAIMSQFLTDY----DILITPATHDI 384 Query: 413 AFPLGKEENNSG-----SMGHIYN------------------DVFTVAVNMAGLPAISVP 449 A G+ + + + +Y+ + +T N+ GLPA+S+P Sbjct: 385 APKHGQLDPDPALREKLAQAEVYSSKEQLQLVKSMFTKGLALNPYTPLANLTGLPALSLP 444 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 L + K PLG+Q + RE+ L ++ + E AG F Sbjct: 445 LYLVQDKYPLGVQFMAAKGREDLLLNLAEQFEA-AGCFE 482 >gi|162448386|ref|YP_001610753.1| putative amidase [Sorangium cellulosum 'So ce 56'] gi|161158968|emb|CAN90273.1| putative amidase [Sorangium cellulosum 'So ce 56'] Length = 581 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 119/450 (26%), Positives = 196/450 (43%), Gaps = 39/450 (8%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGF 99 MN + + A+ S R G R L +G+P+ +KD F +G+ T S Sbjct: 134 MNIAVATSREATLRDADASTARHAAGRPRGLLDGVPLLVKDEFDVEGLPTTLGSPCGPQP 193 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 ++ V +L GAV L K + E+ M + + +P + GGS Sbjct: 194 PAPRDAAVVARLRQAGAVFLCKTVLTEWGMSPIGNSVHQRMPHNP-----HNKERAAGGS 248 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 S GS+ VA L + D GGSIR PA+ G GIKPT+GR SR G F S+ AG Sbjct: 249 STGSAVGVALGLAPLAASGDGGGSIRAPAALNGVFGIKPTFGRVSRAG-DGFKGSVAHAG 307 Query: 220 IITRTVRDSAILLKAIAGY----DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 I + D A L A+A D+ A P + L ++G+ +G+ + D Sbjct: 308 PIASSTADLARFLDAVASEPDPDDDLTAWAPPPPPGGFGARLGAGVRGLRIGVDEAEWRD 367 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 +P W + L+ GA +V++++P ++A Y++ E+ + R Sbjct: 368 ASTPVASVCW-GALRALEREGATLVDVTIPLARHAASIGYLVIGPESLAAFQRA------ 420 Query: 336 LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 E +D++ E+ R T+ L S + A ++R ++R+ Sbjct: 421 -WREQRDLIS--EDLRV--------------TFSLLSGVTALEQIDAARLRAGMRREVAR 463 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND---VFTVAVNMAGLPAISVPAAL 452 A GVDV+ PTT +A P + E + + D F N+ GLPA + P + Sbjct: 464 AL-AGVDVLALPTTAITAPPYAQAEEGRAFLDPVALDGMCRFAFLGNLTGLPAGTAPVGV 522 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +++P+GLQ++G + E + +V +E+ Sbjct: 523 DAERLPIGLQILGDAWDEAAVLAVLAHLER 552 >gi|226227960|ref|YP_002762066.1| putative amidase [Gemmatimonas aurantiaca T-27] gi|226091151|dbj|BAH39596.1| putative amidase [Gemmatimonas aurantiaca T-27] Length = 524 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 125/494 (25%), Positives = 221/494 (44%), Gaps = 38/494 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR-IINGDARDL 71 +S ++ LV Y+ I++ + + +NA + + Q A A AE D G L Sbjct: 42 FKSGRLTCKTLVSQYLARIDSLDKKGPALNAIVTLNPQ-ALATAELLDASYAARGPVGPL 100 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 IP+ +KD F T G+ T S L+G++P ++T+ +++ D GA++L K N+ E+A Sbjct: 101 HCIPLIVKDNFETVGLQTTGGSLALEGWKPPQDATMVKQVKDAGAIVLAKSNLAEWAFTP 160 Query: 132 SNETSYYGP--VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S P +P+ + D+ T GSSGG++AAVA +GTDTG SIR P++ Sbjct: 161 YETVSSILPGYTHNPY----ALDRVT-AGSSGGTAAAVAASYGTLGLGTDTGNSIRGPSA 215 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV--- 246 VGI+ T G SR G+I D AG + R V D+ + IA D D V Sbjct: 216 HQALVGIRSTMGLTSRAGVIPLNEGADIAGPMARRVSDAVAVFDVIAHSDPADTVTVQAN 275 Query: 247 NLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDK----TWQQGISWLKDAGAKIVE 301 N Y AL + +++G +G+ R Y PT+DK +++ ++ L+ AGA +++ Sbjct: 276 NRRAEKYTTALTRGALKGARIGV---LRQAYERPTLDKEVNTVFERAMADLRKAGAVVLD 332 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + A+ ++L RY + R + + + S F V+ Sbjct: 333 TVRVDSLEAIQRRQQGGCNRFKADLERY----FAARAPNAPVKTLNDIITSRRFHPTVEQ 388 Query: 362 RIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKE 419 R+ + D+ ++R ++R ++ T+ + +D ++ PT +G Sbjct: 389 RLRDAA-AATQMPEDNPGCQSREQVRAAVRAAVTQLMDSLQLDAMIYPTWSNPPRLIGDL 447 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLFSVGQ 478 G +++ G PAI+VP +P G+ G+ + E L + Sbjct: 448 NTPHGDNSQVFSPT-------TGFPAITVPMGYTRGGTLPAGISFFGRAWSEYRLIQLVY 500 Query: 479 IIEKEAGYFRPHKW 492 E+ +++ ++ Sbjct: 501 DYEQATKHWKAPRY 514 >gi|121533885|ref|ZP_01665711.1| Amidase [Thermosinus carboxydivorans Nor1] gi|121307396|gb|EAX48312.1| Amidase [Thermosinus carboxydivorans Nor1] Length = 484 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 138/493 (27%), Positives = 218/493 (44%), Gaps = 53/493 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRIINGD-ARDLEG 73 S +++ V+L+ Y++ I+ + Q +NA I + AA K G L G Sbjct: 7 SGNLTTVDLIQWYLRRIDAYDKQGPKLNAVIYINPNALAEAAALDAKLAAAGKLVGPLHG 66 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IP+ +KD TK + T S L + P ++TVT+KL GA++L K+N+ EFA+ Sbjct: 67 IPVLLKDNVNTKDMPTTGGSLSLADYVPPEDATVTKKLRAAGAIILAKVNLHEFAIWGET 126 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +S G ++P+ D T GSSGG+ AA+A IGTDT SIR PAS G Sbjct: 127 VSSILGQTLNPY---DLTRTPG--GSSGGTGAALAANFGLLGIGTDTVNSIRSPASACGI 181 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV---NLPV 250 VGI+PT G SR G+I ++ + D AG + RTV D+ LL + GYD D V Sbjct: 182 VGIRPTLGLISRAGVIPYSFTQDTAGPMARTVSDATKLLNVLVGYDPADEATVWSIGHAE 241 Query: 251 PDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY L +QG +GI + + + + ++K + + LK GA + + P Sbjct: 242 QDYTVHLKANGLQGKRIGILRSFFGKEPVHAEVNKVADRAVEELKAFGATAIGLDTPDLD 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV----KHRIM 364 A AE S +L Y L+ L + + E+ K+ Sbjct: 302 AGKIA------AEISVHL-------YDLKPHLNAYLSAPDANTPVKSLAEIIASGKYHPG 348 Query: 365 IGTYVLSSRCY---DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--E 419 I + ++ D + LR K L +R + +D I+ P P G + Sbjct: 349 IDANIKQAQALEQDDQYRLRLAKRAALRQRIMKIMVDNNLDAIMFPHQKRLVVPTGGYVQ 408 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL------CEKKMPLGLQLIGQPFREETL 473 + +GS+G + G P+I VP + +P+G++ +G+P+ E L Sbjct: 409 VDRNGSLGAV-----------TGFPSIVVPGGFSPPTETAKIGVPVGIEFLGRPWSEGIL 457 Query: 474 FSVGQIIEKEAGY 486 + E+ A + Sbjct: 458 IEIAYGYEQGASH 470 >gi|85077960|ref|XP_956088.1| hypothetical protein NCU04092 [Neurospora crassa OR74A] gi|28917133|gb|EAA26852.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 625 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 141/540 (26%), Positives = 225/540 (41%), Gaps = 104/540 (19%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAI----ENSNSQMNAYIEVVAQKARAAAEE 58 + N+ +V + R S ++ +++ + + I EN +A+ + K AAA Sbjct: 125 QANYYSVEDYRKLYLSGALTPLDVAQALLPLIRRDVENPTEYSSAWFDSKVDKVLAAATA 184 Query: 59 SDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT----QKLWD 113 S +R G + L+G+P G+KD + G T S + H E ++T +KL + Sbjct: 185 STQRYKEGRSLGPLDGVPTGVKDEYDIDGYETNLGSKNIYTGTIHEEDSITTWCVRKLQE 244 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 +GA++LGKL+M EF + ++ +G +P + GGSS G+ AV+ L Sbjct: 245 SGAIILGKLSMHEFGLDTTGNNPVHGTPRNP-----HNPNYYTGGSSSGTGYAVSAGLIP 299 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA------GIITRTVRD 227 +G+D GGSIR P+S G GIKPT+GR +SF P + G I ++ Sbjct: 300 IGLGSDGGGSIRIPSSLCGVFGIKPTHGR------LSFKPGQNHCLTCACLGPIAADIKS 353 Query: 228 SAILLKAIAGYDECDATCVNLPVPDYER-ALDQSIQG----MTVGIPKEYRLDYLSPTID 282 A + + I P P +R +L G +GIP + +P I Sbjct: 354 LATVFQVICKPHPSS------PFPPLKRLSLTGPPNGGDHPKVLGIPSAW-FARATPAIQ 406 Query: 283 KTWQQGISWL-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 I L D G VEI +P A+ I +A++ L + YG R+ Sbjct: 407 TLCNTMIRRLCSDHGYTAVEIDIPFLPEGQIAHAITVLTDAATLLPETGNLTYGNRI--- 463 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-- 399 I +GT + S Y+ A K+R ++ + + ++Q Sbjct: 464 --------------------LIALGTVTPA-----SDYMLAMKLRRVLMQHLSWLWQQYP 498 Query: 400 GVDVILTPTTPTSAFPLGKEEN-----NSG-----SMGHIYNDVFTVAVNMAGLPAISVP 449 G+ +I+TPTT P+ + N G SM +++ N GLP+ISVP Sbjct: 499 GM-LIVTPTTSCEGLPIKSKSELKWGVNDGDRTLQSMEYVW------LANFCGLPSISVP 551 Query: 450 AALCEK--------------KMPLGLQLIGQPFREETLFSVGQIIEKEAG---YFRPHKW 492 A ++P+GL +G+ EE L G + E EAG RP W Sbjct: 552 AGFVSPESGLVNDMDVQGRGEVPVGLMAMGEWCAEEQLLQFGAVCE-EAGADRRRRPPIW 610 >gi|20804014|emb|CAD31591.1| PUTATIVE AMIDASE PROTEIN [Mesorhizobium loti R7A] Length = 476 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 123/486 (25%), Positives = 210/486 (43%), Gaps = 41/486 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F E + +RSK IS VE + + + I ++NA+ + A A A++++ + Sbjct: 9 MGFTPAVELAELVRSKKISPVEYMRTLLARITELEPKINAFAYLAADHAMDEAKKAEGAL 68 Query: 64 INGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++G L G+P+ IKD TK + TQ S I G +P ++ + Q+L GA+++GK Sbjct: 69 MSGGRIGRLHGVPVTIKDHSITKDMPTQHGSKIYAGHQPTEDAPLVQRLRAEGAIIIGKT 128 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + E + + G +PW+ + G SS G+ AA A G+D G Sbjct: 129 TVPEMGWTGVSRSPLTGITSNPWKL-----GYNAGASSAGAGAAAAAGYGPLHQGSDGAG 183 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA---GIITRTVRDSAILLKAIAGYD 239 SIR PA F G G+KP++GR + P D G +TRTV D+A++ + +AG Sbjct: 184 SIRMPAHFCGIYGLKPSFGRIPNYPV----PGSDMTTHNGPMTRTVADAALMTEVMAGPH 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T + Y + + I+G + + + P + + + + + GA + Sbjct: 240 SLDHTTLEAGPASYLGRMHEGIKGRRIAYSPDLGFARVDPEVAELVKAAAARFTELGAVV 299 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E+ P + P + + LA+Y G + S+ QE+ Sbjct: 300 EEVPTPWAKDG-PELIRFFWSAHLTGLAQYLPKWEAEMDPGLVACIKHSENVSVARYQEM 358 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK- 418 ++R M TYV + I R F Q D++LTP+ +AF K Sbjct: 359 RYRKM--TYVAN-----------------IHRWF-----QDWDLLLTPSASVAAFQADKL 394 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + + I F+ NM+ PA SVP +P+GLQ++G+ F + + Sbjct: 395 MPDHWPTHAWDWIMWAEFSYPFNMSWNPAASVPCGFTPAGLPVGLQIVGKRFDDLGVLQA 454 Query: 477 GQIIEK 482 E+ Sbjct: 455 SAAFEQ 460 >gi|187479140|ref|YP_787165.1| amidase [Bordetella avium 197N] gi|115423727|emb|CAJ50277.1| putative amidase [Bordetella avium 197N] Length = 442 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 20/294 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNA-YIEVVAQKARAAAEESD-KRIINGDARDLEG 73 L + ++++LV++ +Q I + Q A Y +V A+ A AA SD R L G Sbjct: 11 LAAGQTTSLQLVENALQRIADYRQQGGAAYTQVDAESALQAAHASDLARRAGYVPSALAG 70 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI IKD F +G + A S LDG P + + V +L GA++LG+ NM EFA Sbjct: 71 LPISIKDLFDVQGQVSTAGSRALDGAAPAVQDAPVVARLRQAGAILLGRTNMSEFAFSGL 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +P + GGS+ G + VA + A++GTDTGGSIR P++F G Sbjct: 131 GLNPHYGTPRAP-----HDENRIAGGSTSGGAVTVARGMAVAALGTDTGGSIRIPSAFCG 185 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KPT R R G + + SLD G + +V A I G + A P+ Sbjct: 186 LTGFKPTASRVPRTGAVPLSSSLDSIGPLAASVGCCATFDAIIRGRLDGSA-------PE 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 S++G+ + I +++ D + P +++ +Q + L GA +V P Sbjct: 239 AA-----SLKGLRLYITRDFVFDNIDPEVEQAFQTYVQNLARHGAILVPFDFPE 287 >gi|330877995|gb|EGH12144.1| amidase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 506 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 129/488 (26%), Positives = 217/488 (44%), Gaps = 43/488 (8%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++VELV +Q IE N+ Q+NA IEV + AA+ +R Sbjct: 42 FESSVELQQRMSAGSLTSVELVQDLLQRIEALNNNGPQLNAVIEVNPDALQIAAQMDAER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP+ +KD T + T A + + G +++ V ++L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPVLVKDNINTGDKMQTTAGALAMVGSPAPHDAFVVKRLREAGAIIIGK 161 Query: 122 LNMDEFAM--GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 N+ E+A G + + + G S + + P GSS GS+ +A ++GT+ Sbjct: 162 ANLSEWAFFRGENPPSGWSGRGGQTLHSYNLS--VDPRGSSTGSAVGLAAGFSPLALGTE 219 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI QPA G VG++PT G SR G+I D G + RTV D+AI+L A++G D Sbjct: 220 TNGSIIQPAQTNGVVGLRPTLGLLSRTGMIPLTRRQDTPGPMARTVTDTAIMLTAMSGTD 279 Query: 240 ECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKD 294 D V ++ +++G +G P RL + S D +Q+ L+ Sbjct: 280 PLDDATGQASTYTVNYFDHLSTDALRGKRLGYP---RLTWDDKSMDDDPDFQKAKISLQS 336 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AGA +V I +P + P + ++ + L Y R GL V D + + Sbjct: 337 AGAIVVPIDVPDIDNS-PEFDVML-QDFKRELNAYLSTRPGLEVSTLDDIIAFNTASPSA 394 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G + ++I + S+ D L D A +Q +D ++ Sbjct: 395 EGYD--QNLLIQS---SNTPVDPDNLSK-------ATDLRNANQQLIDGLV--------- 433 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + ++ + F +AG P I+VP + MP GL + + E L Sbjct: 434 ----QQQSLDALVDLSYVSFKGVGAVAGYPGITVPFMRHDDGMPEGLYFLSTAWDEANLL 489 Query: 475 SVGQIIEK 482 S +E+ Sbjct: 490 SYAYALEQ 497 >gi|269218058|ref|ZP_06161912.1| 6-aminohexanoate-cyclic-dimer hydrolase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212993|gb|EEZ79333.1| 6-aminohexanoate-cyclic-dimer hydrolase [Actinomyces sp. oral taxon 848 str. F0332] Length = 483 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 139/509 (27%), Positives = 222/509 (43%), Gaps = 63/509 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE-------- 58 ++ E + +RS +A ELV + ++ I + ++NA+ V ++A A A+ Sbjct: 9 LSAGEMAEGVRSGRWTARELVAASLERIGRLDPELNAFTVVRTKEALAEADRLDAELAGE 68 Query: 59 --------SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK 110 +D R R L G+PI +K+ F G+ T + +S V ++ Sbjct: 69 AKGRKASGADSRPTVDTGRLLTGVPIAVKEEFDVAGLPTTLGGSG-NPSPAAADSEVIRR 127 Query: 111 LWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 + GA+++GK M EF S + YG ++PWR F+PGGSSGGS+ AVA Sbjct: 128 VRAAGAIVVGKTTMPEFGRCSETISDRYGATLNPWR-----HDFSPGGSSGGSAVAVAAG 182 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 + ++G D GGSIR PA+ G +G+KP GR + + +L G ++RT DSA+ Sbjct: 183 MTPIALGADGGGSIRLPAACCGILGLKPERGRVTMAPLSQHWHALVTFGGLSRTAADSAL 242 Query: 231 LLKAIAG---YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTW 285 L AIAG D A ++ P Y + + + + + L P +D+ Sbjct: 243 LYDAIAGSLPSDRWQAEPLSEP---YRDVVARGTGSLRIAWTGRSPMPGLKNDPEVDRAL 299 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY-GLRVEGKDIL 344 I L G + E H + +P I L + G+ VE + L Sbjct: 300 TALIQRLARLGHDVRET---HAAWPVPTDAFI--------LQFFSGMATEADSVEAPEKL 348 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 E + RI ++ +R R K I R F E F DV+ Sbjct: 349 ERH------------TRRIAAVGRLIPTRLARFAERRGEK----IARAFNERFLPTADVL 392 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA----VNMAGLPAISVPAALCEKKMPLG 460 PT P PLG E+ S + I+ VA N+ G PA+S+P + + +P+G Sbjct: 393 AMPTIPVLPRPLGWLESRS-TFASIFRGTPMVANTSIFNVTGHPALSIPGGVSAEGLPIG 451 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +QL+ +P RE L ++ +EK+ + P Sbjct: 452 MQLVTRPGREGLLLALAAQLEKDEPWPTP 480 >gi|257056106|ref|YP_003133938.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] gi|256585978|gb|ACU97111.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Saccharomonospora viridis DSM 43017] Length = 479 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 137/501 (27%), Positives = 229/501 (45%), Gaps = 69/501 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F + +E L +++SA EL+ +++Q IE N ++NA + +V + A AA +D+ Sbjct: 5 ELCFRSATELVQLLHRRELSARELLAAHLQRIETINPKINAIVTLVPEHAERAAAAADEA 64 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I++G+ L G+P+ KD TKGI T S P +S V + L GAV +GK Sbjct: 65 IMSGEPLGPLHGLPVAHKDLTETKGIRTTYGSPARADHVPDVDSVVVESLTKAGAVTVGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N E+ GS + +G +P+ T GGSSGG++AA+A L + GTD G Sbjct: 125 TNTPEWGTGSQTYNAVFGVTRNPYDLSK-----TSGGSSGGAAAALAARLVPIADGTDMG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ------AGIITRTVRDSAILLKAI 235 GS+R PASF VG++P+ GR + PS D AG + RTV D A+ ++ + Sbjct: 180 GSLRNPASFCNVVGLRPSVGR------VPVWPSADPMFTFAVAGPMARTVADVALQMRVL 233 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTV-------GIPKEYR-LDYLSPTIDKTWQQ 287 D ++P + +L++ G +V G+P + R + ++P + Sbjct: 234 GRPDPRSPLSHHVPAERFADSLERDFTGTSVAWSADLGGLPVDERVVQAMAPAREV---- 289 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 L D G ++ + T A + Y L ++ E+Y Sbjct: 290 ----LTDLGCQVADRDPDMTG-------------ADEVFRTWRSWYYVLTLD-----ELY 327 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI---KRDFTEAFEQGVDVI 404 + FG I +G V + +RA+++RT + R+F + +E + Sbjct: 328 RE-QPEAFGASTAWNIEVGRKVTA-----EDLVRAQRLRTALYHRMREFLDTYE----FL 377 Query: 405 LTPTTPTSAFPLGKE--ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLG 460 +T +P F + + E+ +G Y D ++ GLPA SVP + +P+G Sbjct: 378 VTLVSPVPPFDVETKYPESVAGVASESYLDWMRACYWISATGLPAASVPFGFTPEGLPVG 437 Query: 461 LQLIGQPFREETLFSVGQIIE 481 LQ++G+P + + + IE Sbjct: 438 LQIVGRPGDDFGVLQLAHAIE 458 >gi|167578120|ref|ZP_02370994.1| amidase [Burkholderia thailandensis TXDOH] Length = 484 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 134/478 (28%), Positives = 203/478 (42%), Gaps = 38/478 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N +NA + + A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLTHIERVNGDVNAIVALREPDVLLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ D T K G S G ++A A L A G+D GGS+R PA+F Sbjct: 138 FNEVYGATRNPY---DLT-KSAGGSSGGAAAALAARMLPVAD-GSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ GR R I F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGRVPRWPSIDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPQR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + + LD ++G + ++ YL+ + G+ L +A + ALP Sbjct: 253 FAQPLDADLRGKRIAWVGDWN-GYLA------MEAGVLELCEASFDALRAIGCDVDAALP 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A+ SP + + G G ++ E +R E + + G + L + Sbjct: 306 AF---SPERIWQTWLAHRHLLSG----GSLLMHYREPSRRALLKPEAVYEVE-GLFALGA 357 Query: 373 -RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 Y++ R+ + L F + D I PT FP + ++ Sbjct: 358 VDIYEASAARSAWYQAL------ATFFERYDYIAAPT--AQVFPFDVDLRWPRTIAGRAM 409 Query: 432 DVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D + V +AG P ISVP +P+G+QLIG+P + + + EKE Sbjct: 410 DTYHRWMETVVPWTLAGCPVISVPVGFNAVGLPMGMQLIGRPRDDFAVLQLAHAYEKE 467 >gi|33601974|ref|NP_889534.1| amidase [Bordetella bronchiseptica RB50] gi|33576412|emb|CAE33490.1| putative amidase [Bordetella bronchiseptica RB50] Length = 449 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 16/237 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 ++G+PI IKD F G T A S D ++ V ++L GAV++G+ NM EFA Sbjct: 69 IDGLPISIKDLFDVAGETTMAGSVARQDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEFAY 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW D PGGSS G++ +V + + +IG+DTGGS+R PA+ Sbjct: 129 SGLGLNPHYGTPRNPW---DRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAA 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KP+ R S G++ + +LD G + +VR A L +AG D+ D +P Sbjct: 186 LCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAGGDDAD-----IP 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 VP ++ G+ + +P LD L + T+ ++ L +AGA I EI++P Sbjct: 241 VP-------AALLGLRLAVPTTLALDGLDAHVSATFAATLAKLAEAGACIDEIAVPE 290 >gi|325168354|ref|YP_004280144.1| 6-aminohexanoate-cyclic-dimer hydrolase [Agrobacterium sp. H13-3] gi|325064077|gb|ADY67766.1| 6-aminohexanoate-cyclic-dimer hydrolase [Agrobacterium sp. H13-3] Length = 480 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 144/510 (28%), Positives = 215/510 (42%), Gaps = 75/510 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E + ++ ++S D++A EL+++ I E N Q+NA I + ++ARA + Sbjct: 3 MDEFVDLDLTAQAALVKSGDVTASELLEAAISRAELVNPQVNAIIRPLHEEARAEVGNAS 62 Query: 61 KRIINGDARDLEGIPIGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G P +KD + GI T S I F P ++S + ++ + G Sbjct: 63 PDTA------FAGAPFLVKDLYCHMAGIPTSGASEITKDFIPQHDSELMRRYRNAGLSTF 116 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ EF + E +G ++PW + S+ SSGG+ AAVA + A+ G D Sbjct: 117 GKTNLCEFGTLGTTEPRLFGATLNPWDTSRSSGG-----SSGGAGAAVAAGIVPAAHGGD 171 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL-DQAG------IITRTVRDSAILL 232 GSIR PAS G G+KP+ GR IS P L D G +++RTVRDSA LL Sbjct: 172 GAGSIRIPASCCGLFGLKPSRGR------ISLGPDLGDSTGGIVNEHVLSRTVRDSAALL 225 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISW 291 A G D P DY +AL + + + + E L ++ P Sbjct: 226 DATRGAMAGDPYTAPPPEIDYVQALRSAPRRLRIAFTTESLLGTHVDPDCVAATVSTAKL 285 Query: 292 LKDAGAKIVEI--SLPHTQYA--LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + G ++VE SL Y ++ ++ A + LAR V + Sbjct: 286 CESLGHEVVEAHPSLDAETYRTYYKRFWAMTATRAITALAR------SRNVPADTLAGKV 339 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 E FG V R+ Y++ + + R + + DF DV LTP Sbjct: 340 ETFNQYLFG--VGSRVTAADYLVDLNWF---HGAGRTVANFLG-DF--------DVWLTP 385 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDV---------------FTVAVNMAGLPAISVPAAL 452 T LG ++GH DV FT NMAGLP++SVP A Sbjct: 386 T-------LGSPPP---ALGHFDADVHGGEEVMERFLQFLAFTTFANMAGLPSMSVPLAW 435 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +P+G Q G+ EETLF + +E+ Sbjct: 436 TAGGLPVGTQFTGRFNDEETLFRLAAQLEE 465 >gi|311744443|ref|ZP_07718244.1| amidase [Aeromicrobium marinum DSM 15272] gi|311312248|gb|EFQ82164.1| amidase [Aeromicrobium marinum DSM 15272] Length = 466 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 133/495 (26%), Positives = 209/495 (42%), Gaps = 44/495 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ + + D L + +SAVELV ++ + + A++ + +A AA ++D Sbjct: 1 MTDLHELDAHDQADLLTRRVVSAVELVSHHLDRADRLGPDLGAFVTLTPDRALRAAHDAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G+ G+P KD T G+ T S +L P ++ V + + G V LG Sbjct: 61 RRRAAGEVPIFCGVPTAFKDLTPTAGVRTTMGSALLADAVPDTDAHVVRLVEQAGFVSLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF + S + GP +PW + SSGG++AAVA L + G+D Sbjct: 121 KTNTPEFGLSSYTDNDVVGPAATPWDPSRNAGG-----SSGGAAAAVAAGLVPLAAGSDG 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PAS G VG KP+ GR S S L G + RTVRD+A LL +A Sbjct: 176 GGSIRIPASCCGVVGFKPSRGRVSPGPAGSDWNGLAGDGPLARTVRDAAALLDVLAVRQV 235 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-----SPTIDKTWQQGISWLKDA 295 DA + P + +D+ + + + YL P + W+ L Sbjct: 236 GDARGLPDPPTPFASCVDRDPGRLRI---ARWSQPYLPGIETDPAVVAVWEDAGRLLAAL 292 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G +V++ P P + ++ SS +A + + + NTR + Sbjct: 293 GHDVVDVPNPFPAELEPQFNVVW----SSGMA-------AAPIPDEAAPMLRANTR---Y 338 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +E R + + D L R + T + DF D LTPT P Sbjct: 339 WRERGGRATAAELAAAMQFLD---LTTRGVMTGLA-DF--------DAFLTPTLAMPPQP 386 Query: 416 LGK-EENNSGSMGH---IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E+ + H + FT NMAG+PA S+P + +P+G+ L + Sbjct: 387 HAWFTESGDPAEDHRRELMFTPFTAVYNMAGVPAASLPLGSVD-GLPVGVMLATHAGHDA 445 Query: 472 TLFSVGQIIEKEAGY 486 LFS+ +E A + Sbjct: 446 ELFSLLGQVEAAAPW 460 >gi|289619354|emb|CBI53637.1| unnamed protein product [Sordaria macrospora] Length = 620 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 141/539 (26%), Positives = 230/539 (42%), Gaps = 103/539 (19%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAI----ENSNSQMNAYIEVVAQKARAAAEE 58 + + +V E R S ++ +++ + + I EN +A+ + +K AAA Sbjct: 121 QAKYYSVDEYRKLYLSGALTPLDVAQALLPLIRRDVENPTEYSSAWFDSKVEKVLAAARA 180 Query: 59 SDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT----QKLWD 113 S +R G + L+G+P G+KD + G T S + H E ++T +KL + Sbjct: 181 STQRYKEGRSLGPLDGVPTGVKDEYDIDGYETNLGSKNIYTGTIHEEDSITTWCVRKLQE 240 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 +GA++LGKL+M EF + ++ +G +P R+ + + +T GGSS G+ AV+ L Sbjct: 241 SGAIILGKLSMHEFGLDTTGNNPIHG---TP-RNPHNPNYYT-GGSSSGTGYAVSAGLIP 295 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA------GIITRTVRD 227 +G+D GGSIR P+S G G+KPT+GR +SF P + G I ++ Sbjct: 296 IGLGSDGGGSIRIPSSLCGVFGLKPTHGR------LSFKPGQNHCLTCACLGPIAADIKS 349 Query: 228 SAILLKAIAGYDECDATCVNLPVPDYER-ALDQSIQG---MTVGIPKEYRLDYLSPTIDK 283 A + + I P P +R +L G +G+P + +P I Sbjct: 350 LATVFQVICKPHPSS------PFPPLKRLSLTTPPNGGNPKVLGVPSAW-FARATPAIQT 402 Query: 284 TWQQGISWL-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD 342 I L D G VEI +P A+ I +A++ L + YG R+ Sbjct: 403 LCNTMIRRLCSDHGYTAVEIDIPFLPEGQIAHAITVLTDAATLLPETSNLTYGNRI---- 458 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--G 400 I +GT + S Y+ A K+R ++ + + ++Q G Sbjct: 459 -------------------LIALGTVTPA-----SDYMLAMKLRRVLMQHLSWLWQQYPG 494 Query: 401 VDVILTPTTPTSAFPLGKEEN-----NSG-----SMGHIYNDVFTVAVNMAGLPAISVPA 450 + +I+TPTT P+ + N G SM +++ N GLP+ISVPA Sbjct: 495 M-LIVTPTTSCEGLPIKTKSELKWGVNDGDRTLQSMEYVW------LANFCGLPSISVPA 547 Query: 451 ALCEK--------------KMPLGLQLIGQPFREETLFSVGQIIEKEAG---YFRPHKW 492 ++P+GL +G+ EE L G + E EAG RP W Sbjct: 548 GFVSPESGLVNDMDVQGRGEVPVGLMAMGEWCAEEQLLQFGAVCE-EAGADRRRRPPIW 605 >gi|296156644|ref|ZP_06839482.1| Amidase [Burkholderia sp. Ch1-1] gi|295893243|gb|EFG73023.1| Amidase [Burkholderia sp. Ch1-1] Length = 484 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 119/445 (26%), Positives = 197/445 (44%), Gaps = 68/445 (15%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ + +KD T G+ T A + L+GF P + Q+L D GA++LGK NM E A G Sbjct: 75 LAGLAVVVKDNINTAGLQTSAGTPALEGFVPDTNAPSVQRLIDAGAIVLGKANMHELAFG 134 Query: 131 --SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 S+N ++ GPV +P+ D T PGGSSGG++AA+A + A +GTDTGGS R PA Sbjct: 135 ITSTNFATHAGPVRNPY---DPT--LIPGGSSGGTAAAIAARIAPAGLGTDTGGSTRIPA 189 Query: 189 SFTGTVGIKPTYGRCSRL-------GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 + TGT G +P+ G ++ + + D G + RTV D A+L I G Sbjct: 190 ALTGTAGFRPSVGNGGAERRYHDPDAVVPISHTRDTVGPMARTVADIALLDGVITGAGAL 249 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 A +++G+ +G+P + L + + + L+ AG +V Sbjct: 250 PAI---------------TLRGLRIGLPAPL-WEGLERQVADVTKAALKTLEAAGVVLVP 293 Query: 302 ISLP-----HTQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTR 351 +++ + P + + + L D V R+ D+ +Y+ Sbjct: 294 VAMNELDELNGMVGGPIAIHEARDDVLAWLVANDAPVKTVVEMAARIASPDVRAIYDGVL 353 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTP 410 G+ + + +Y R R ++R F ++ +D +L PTT Sbjct: 354 DDILGERYEAAL--------------NYWRPR-----LQRYMAATFADERLDALLFPTTR 394 Query: 411 TSAFPLGKEENNS-----GSMGHIYNDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQ 462 +A P+ +S GS D F T + +G+P +S+PA + +P+GL+ Sbjct: 395 LAAVPIDDVNGSSTVSIDGSEPIDTMDAFLRNTDPASTSGIPGLSLPAGMTASGLPVGLE 454 Query: 463 LIGQPFREETLFSVGQIIEKEAGYF 487 L G + L ++G E+ G Sbjct: 455 LDGPLGEDRRLLAIGVAFEQLLGAL 479 >gi|120612462|ref|YP_972140.1| amidase [Acidovorax citrulli AAC00-1] gi|120590926|gb|ABM34366.1| Amidase [Acidovorax citrulli AAC00-1] Length = 467 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 135/487 (27%), Positives = 223/487 (45%), Gaps = 36/487 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS ++ ++ +E + +S VE++D+ + +E ++ +NA+ V + A A S+ Sbjct: 1 MSAIHHLSAAELAAGYSRRALSPVEVLDALLARVEQTSRSLNAFCCVDTEAAMRQARASE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACS-HILDGFRPHYESTVTQKLWDNGAVM 118 R G A L+G+P+ IKD T G+ T+ S + + +S ++L + GAV Sbjct: 61 ARWHRGQALGPLDGVPVSIKDNLGTAGMPTRFGSLAVGEAAAQLPDSPCVERLREAGAVF 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK M +FA ++ G +PW +++PGGSSGG++AAVA L ++GT Sbjct: 121 IGKTTMPDFAHKILTDSPLTGITRNPW-----NPEYSPGGSSGGAAAAVAAGLGPIAVGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR PA+FTG G KP++GR +FA L G +TRTV D+AI++ I Sbjct: 176 DGGGSIRIPAAFTGIYGFKPSFGRVPHYPRGAFA-LLSHVGPMTRTVEDAAIVMNTITRP 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + DY+ L +S+ G + LD +P +T + LK + A+ Sbjct: 235 DPRDWYALPYRTTDYQAGLRESLAGWKIAFSPSLGLD--TPPCPET----LDALKHS-AR 287 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I+E +L A+ + A + R V + + + + S Sbjct: 288 ILE--------SLGAHIEMRDPPAVAQCQRIHRVLWSAFC--AKLADSLGSEASAQLDVS 337 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ + G + D+ R + + FTE D++L P P +A PL Sbjct: 338 LRMLVEAGRALQPGEVLDALTQRG-EAGCSVNGFFTE-----YDLVLCPVHPATA-PLLA 390 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S +Y T N GLPA SV A +P+G+QL+G+ + + + Sbjct: 391 ACPASDPPYPLY----TPWCNQLGLPAASVYAGHAANGLPIGVQLVGRQHDDAAVLAASH 446 Query: 479 IIEKEAG 485 E+ G Sbjct: 447 AYERAVG 453 >gi|254487612|ref|ZP_05100817.1| amidase [Roseobacter sp. GAI101] gi|214044481|gb|EEB85119.1| amidase [Roseobacter sp. GAI101] Length = 442 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 131/466 (28%), Positives = 199/466 (42%), Gaps = 67/466 (14%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIK 79 I V L +Y+ AI+ + Y V A +A A A + R G L+G+PI K Sbjct: 21 IDPVALCKTYLDAIDTHPLRDRIYARVTADRAIAEAHAASMRAKAGHRLSPLDGVPISWK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SNETSY 137 D F T G T+A S +L P ++ V Q G V LGK +M E A N ++ Sbjct: 81 DLFDTAGTVTEAGSMLLKDRMPDTDALVLQNATAMGLVCLGKTHMSELAFSGLGHNPSTA 140 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 P I + T+ + G SSG +++ G L AA+IG+DTGGS+R P+ + VG+K Sbjct: 141 TPPCI------NDTEAVSGGSSSGAAASVAFG-LAAAAIGSDTGGSVRIPSGWNDLVGLK 193 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 T GR S G++ A D G + R+V D+ +LL A+ G D + +L Sbjct: 194 TTAGRLSLQGVVPLAMKFDTVGPLCRSVEDAGLLLAALEGTKPADLSGTDL--------- 244 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 +G I ++ L + + L++AGA I +I+LP A+P + Sbjct: 245 ----EGRRFAILHSVAMEDLDDGPRAAFSDAVDKLREAGAIIEDITLPEIAQAMPLSGCL 300 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 AEA YGL +D++ E M G + R S Sbjct: 301 FTAEA-----------YGLW---RDVI-------------EADPEAMYGEILERFRLGKS 333 Query: 378 H----YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-----SGSMGH 428 H Y+ A +++ + A G D +L PT P L + E++ S ++ Sbjct: 334 HSGPDYVAAWATLEALRKAYDRAV-AGYDAVLLPTAPILPPKLARLESDHDYYVSANLMT 392 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + N T N+ GL AI++P GL ++ P EE L Sbjct: 393 LRN---TRIGNLMGLCAITIPTGTAS----CGLMMMAAPGSEERLL 431 >gi|149907942|ref|ZP_01896610.1| hypothetical protein PE36_19780 [Moritella sp. PE36] gi|149808948|gb|EDM68879.1| hypothetical protein PE36_19780 [Moritella sp. PE36] Length = 460 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 126/495 (25%), Positives = 211/495 (42%), Gaps = 80/495 (16%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVA-QKARAAAEESDKRIINGDARD-LEGIPIGI 78 +S+ ++ + YI I N ++NA ++ R A+ +D + NG+ L GIP+ I Sbjct: 10 LSSEQVTEHYIAEITRINPKINALVQTADFDLLRTEAKAADLAVKNGEQLGRLHGIPLSI 69 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD G + L F ++T+ +L GA++LG N E M + Y Sbjct: 70 KDMCKVNGFVCTLGTSGLKAFVADRDATIVARLKQQGALILGITNTPELLMAFETDNLLY 129 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G P+ S ++PGGSSGG +A ++ A +G+D+ GSIR P+S+ G G+K Sbjct: 130 GRTNHPFNS-----DYSPGGSSGGEAALISAGCSPAGMGSDSMGSIRVPSSYCGIAGLKV 184 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRT---------VRDSAILLKAIAGYDECDATCVNLP 249 T GR + G + + AG+ RT V D A+LL+ G D+ D + Sbjct: 185 TQGRLPQTGRL----PQEGAGLHVRTASYGPMGRYVDDVALLLEITHGPDQVDPNSPPVA 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + +Y+ D + +TV +W D G + S+ Sbjct: 241 LENYQ---DVDLSDLTV-----------------------AWYDDNGLVTPDQSVKAAIA 274 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A + S AR D + +VEG LEM I FG + G + Sbjct: 275 K--AADALDGKTKSCEWARPDCLE---QVEGL-ALEM------IAFGADSGLSWAKGAEL 322 Query: 370 LSSRCYD---SHYLRARK------------IRTLIKRDFT-EAFEQGVDVILTPTTPTSA 413 L ++ + +L A K +R+ +F AF Q D+ L P TPT+A Sbjct: 323 LGTKTTSPLFNAFLNAAKSCDIGVTELRGRLRSWDIYNFNMNAFSQQYDITLCPVTPTAA 382 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 F + +N I +T+A ++ G P +V + P+G+Q++G+ + E + Sbjct: 383 FKHNESSHN------IRQFAYTMAYSLTGQPVATVNIGADKNGFPIGIQIVGRLWCEHQV 436 Query: 474 FSVGQIIEKEAGYFR 488 +V + +E+ G ++ Sbjct: 437 LAVAKYLERRFGGYQ 451 >gi|145236912|ref|XP_001391103.1| hypothetical protein ANI_1_1358064 [Aspergillus niger CBS 513.88] gi|134075568|emb|CAK39234.1| unnamed protein product [Aspergillus niger] Length = 475 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 129/507 (25%), Positives = 219/507 (43%), Gaps = 60/507 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + +++ R D SAV+LV +Y++ I+ N ++NA + + + A D Sbjct: 5 DLSELTIAKVHTAFRRGDYSAVDLVQAYLRRIDQVNPRLNAILAINPNAVQEAQALDDAF 64 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG--FRPHYESTVTQKLWDNGAVMLG 120 + R L G+P+ +KD T + T S + P ++ V ++L GA++L Sbjct: 65 RASRTLRPLHGVPVLVKDNIFTTAMPTTYGSKVAASRPVLPLDDAQVIKQLQGAGAIILA 124 Query: 121 KLNMDEFAMGSSNETSYY-GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K + ++A T ++ +S W PGGSS G++A +A L +GTD Sbjct: 125 KTTLPDWA------TDFFSASTVSTWTQNPYDLARDPGGSSSGTAAGIAANLALVGVGTD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR P+SF VG++PT G S G+ F D G + RTV D+A LL Sbjct: 179 TGGSIRLPSSFCSLVGMRPTVGLTSLDGVSPFVGCQDTVGPMCRTVTDAARLLD------ 232 Query: 240 ECDATCVNLPVPDYERALDQS-----IQGMTVGIPKEYRLDYL------SPTIDKTWQQG 288 L +P ++L S + +P L +L ++ + Q Sbjct: 233 -------TLVLPTSPQSLAPSGGSYAAHLLPDSLPGPVCLGHLPQLGAEEAAVEALFTQV 285 Query: 289 ISWLK-DAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEGKDILE 345 ++ L+ A + ++ +P L A AS L+R +D + G + Sbjct: 286 LTRLRGHASVTVRDLDIPSLSSTL--------AAASIMLSRGQHDLDDFLRTTVGTSLKT 337 Query: 346 MYENTR--SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVD 402 +Y + FG + G +S D A R + R T Q GV+ Sbjct: 338 IYRDHAYPPTNFG-------IPGVATHASTLTDRST--ASNARDALDRIITAHLGQAGVE 388 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 V++ T +A ++E+ + MG + V + + PAISVP +P+GL+ Sbjct: 389 VLVFLTAGRAA---PRQEDITPEMGVTF-PVHAMLASTLQWPAISVPIGFTATGLPVGLE 444 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRP 489 ++G+P ++ L V +IE+ RP Sbjct: 445 ILGRPLSDQRLLEVAFVIEQIVQGRRP 471 >gi|315932740|gb|ACP39716.2| aryl acylamidase [bacterium CSBL00001] Length = 495 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 138/517 (26%), Positives = 234/517 (45%), Gaps = 65/517 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S +++ + +E + ++SK IS E+V+S I IE + +NA + +AR A ++ Sbjct: 6 SPVHWKSAAEIVELVKSKQISPREVVESTIDLIEQRDPGLNAVVYKAYDEAREKAAALER 65 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE--------STVTQKLW 112 RI+ G+ L G+P +KD FA K L G R + ST K+ Sbjct: 66 RIMQGEPVGMLAGVPTLMKDLFAAK----PGWPSTLGGIRALKDARGAAGVWSTYPLKMS 121 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 +++LG+ N + + + +++GP +P+ ++D F GGSSGG++A VA + Sbjct: 122 GEDSLLLGQTNSPVYGFRGTTDNTFFGPTRNPF-NLD----FNAGGSSGGAAALVADGIV 176 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRC---SRLGIISFAPSLDQAGIITRTVRDSA 229 + GTD GGSIR PA++T T G +P+ GR SR P L + G ITRTVRD+A Sbjct: 177 PVAGGTDGGGSIRIPAAWTNTYGFQPSIGRVPFKSRPNAFHPGPYLYE-GPITRTVRDAA 235 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 + + + G+D D + + + D+ AL Q ++G +G+ Y + + I + Sbjct: 236 LAMNVLHGFDRRDPASLRVKL-DFTSALAQGVRGKKIGLTLNYGVFPVQQEIQDLIGKAA 294 Query: 290 SWLKDAGAKI--VEISLPHTQYALPAYY---IISPAEASSNLARYDGVR-YG-LRVEGKD 342 + GA + V++ +P++Q + + I P AS R +G+ YG R + D Sbjct: 295 RVFTELGAHVEFVDLGIPYSQKQMSDAWCRMIAIPTVASMQALRKEGIDLYGEHRADIPD 354 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 L + + + Q++ ++ T V C + + R D Sbjct: 355 ALMKWIDAVADISVQQISADQLLRTTVFD--CMNGVFDR-------------------FD 393 Query: 403 VILTPT-------TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 ++L PT T G + N + + T N +G P+ SVPA L + Sbjct: 394 LLLAPTLACMPVRNATDGCTEGPSQINGEEIDPLIGWCMTYLTNFSGHPSASVPAGLID- 452 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +P G+ +IG R+ L +I A + R W Sbjct: 453 GLPAGMLIIGD--RQADL----DVIAASAAFERASPW 483 >gi|320334610|ref|YP_004171321.1| Amidase [Deinococcus maricopensis DSM 21211] gi|319755899|gb|ADV67656.1| Amidase [Deinococcus maricopensis DSM 21211] Length = 466 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 135/472 (28%), Positives = 215/472 (45%), Gaps = 51/472 (10%) Query: 29 SYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH 88 +Y+Q I+ ++ NA I +V A A A + + L G+P+ +KD G+ Sbjct: 29 TYLQRIQTHGARTNA-ITLVNPDAEADAARATPDGL------LAGVPVLVKDNIDVAGMP 81 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGSSNE-TSYYGPVIS 143 T A S ++ P ++ +T +L GAV+LGK N+ E+A +G N +S G V++ Sbjct: 82 TTAGSALMRAHVPDEDAPLTARLRAAGAVILGKANLTEWANFMTVGMPNGYSSGGGQVLN 141 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 PWR+ SS GS AAVA L ++GT+T GSI PA G G+KPT G Sbjct: 142 PWRAGHDVGG-----SSSGSGAAVADRLAPIAVGTETSGSILSPAHQNGVYGLKPTVGLI 196 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL-DQSIQ 262 R GI+ A S D AG + R+ RD A+L + + G DE D P D+ AL D ++Q Sbjct: 197 PRTGIVPIASSQDTAGPLGRSARDCALLAQVMQGPDERDPATAGAPTLDFLGALNDAALQ 256 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI-ISPAE 321 G +G+ +E L+ ++G++ L+ AGA +V+++L T L A+ + + E Sbjct: 257 GARIGVVREPYFSNLTDAERDVMERGLAALRAAGATVVDVTL-DTAQDLEAWRLEVLVHE 315 Query: 322 ASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 +L Y GVR+G R +D+++ G ++ + + G +L + L Sbjct: 316 FKRDLNAYLAGVRHGPR-SLRDVID--------GLNEDPERLALHGATLLLAAEGTRGDL 366 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-FP--LGKEENNSGSMGHIYNDVFTVA 437 R RD +G+DV+ T + FP LG Sbjct: 367 SERLYTQARARDLDLTRTRGLDVLFTRNALDAVLFPKYLGCHVGAK-------------- 412 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 AG P+++VP + +P G L G + + L + G + P Sbjct: 413 ---AGYPSVAVPVGTAD-GVPCGFMLTGPAWSDARLLAFAHAAAPHLGAWTP 460 >gi|218778547|ref|YP_002429865.1| amidase [Desulfatibacillum alkenivorans AK-01] gi|218759931|gb|ACL02397.1| Amidase [Desulfatibacillum alkenivorans AK-01] Length = 573 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 124/488 (25%), Positives = 219/488 (44%), Gaps = 60/488 (12%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F+ V+E L + I++++L Y+ ++ + + + + A A+++D I Sbjct: 132 FLPVTELSALLAQRQITSLDLTRMYLARLKKFDPVLKCVVTLTEDLAIEQAKQADSEIAA 191 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L GIP G+KD FATKGI T ++V +L GAV++ KL++ Sbjct: 192 GKHRGPLHGIPWGVKDLFATKGIPTSWGMEAYKDRVIDQNASVVDRLEKAGAVLVAKLSL 251 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E A G + + G +PW K GGSS GS++A A L ++GT+T S+ Sbjct: 252 GELATG---DRWFGGRTRNPWNP-----KTGSGGSSAGSASAAAAGLVGFALGTETNNSL 303 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA G G++PT+GR SR G+++ A S D+ G + R+ D A++L AIAG D+ D + Sbjct: 304 VGPAMVCGNTGLRPTFGRVSRYGVMTVAWSFDKIGPLCRSAEDCALVLDAIAGRDDRDHS 363 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEY-----RLDYLSPTIDKTWQQGISWLKDAGAKI 299 V+LP + R D ++ M VG +E + Y++ ++ + + + D G ++ Sbjct: 364 TVDLPC-GFNRCPD--VRHMKVGYVRELLSMPPQNQYMADILN-AHKTALKAIGDLGVQL 419 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V + Y S A A ++ + + L E E R+ F V Sbjct: 420 VPLPPFEPGTFDKLVYSASICMAVEAAAAHEDLMHDLGPEAFKHSNWPERLRAARFIPAV 479 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + Y++A + R+++ + E VDV+L T Sbjct: 480 E------------------YVQASRARSVLMQ-MVEDKMGDVDVLLGRLT---------- 510 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 V ++ N+ G P + +P L + +P+ + L G + E L ++G+ Sbjct: 511 -------------VSSLQGNLTGHPELVMPYGLNAQGLPVSIILTGNLYEESKLIALGRA 557 Query: 480 IEKEAGYF 487 ++ + G++ Sbjct: 558 LQNKTGHY 565 >gi|302527303|ref|ZP_07279645.1| amidase [Streptomyces sp. AA4] gi|302436198|gb|EFL08014.1| amidase [Streptomyces sp. AA4] Length = 483 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 147/507 (28%), Positives = 230/507 (45%), Gaps = 49/507 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E NF + LR+ + ++ EL D I IE + +NA +ARAAA E+D+ Sbjct: 2 ERNFDSAEALAAALRAGEATSAELTDEAIARIEREDKALNAICVPDFDRARAAAREADRA 61 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G+ R L GIP+ +K+C+ G+ T H D F P ++ ++L GAV+LGK Sbjct: 62 RARGEDRPLLGIPVTVKECYNVAGLPTTWGLPHHRD-FLPAEDAVQVKRLKSAGAVILGK 120 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ G + YG +PW D+ TPGGSSGGSSAA+A A SIG+D G Sbjct: 121 TNVPLGLQGLQSSNPVYGTTNNPW----DHDR-TPGGSSGGSSAALAAGFGALSIGSDIG 175 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPSLDQA--GIITRTVRDSAILLKA 234 GS+R PA F G G KP+ G + G++ L A G + RT RD A+LL Sbjct: 176 GSLRTPAHFCGVYGHKPSLGLVANRGMVLPGELPLPTELHLAVVGPMARTARDLALLLDI 235 Query: 235 IAGYDECD---ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +AG D A + LP +ER D V I ++ + + Sbjct: 236 MAGPDPLTYGVAHELALPPARHERLSD-----FRVLILDDHPFIPTGAAVRAGVNRVADA 290 Query: 292 LKDAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 L DAGA++ S LP + A Y + S ++AR+ ++ YE Sbjct: 291 LADAGAQVERHSPLLPDLEEAATLYTQLL---FSGSVARFP-------------VDAYEQ 334 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 ++ G + + + +L R L + + + F + D ++ P T Sbjct: 335 LQARAAGLSADDQSLDAARLRGMVLTHRDWLGVHHRRELHRHGWRQFFAE-FDAVVCPVT 393 Query: 410 PTSAFPLGKEEN------NSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGL 461 PT AFP + + + + + D V+ M GLPA ++PA L + +P+G+ Sbjct: 394 PTPAFPHDHNPDLLACRIDIDGVEYPFFDQLVWAGVATMPGLPATAMPAGLSPEGLPVGV 453 Query: 462 QLIGQPFREETLFSVGQIIEKEAGYFR 488 Q++G F + T + +++E+ G F+ Sbjct: 454 QIVGPMFEDRTPLRLAELLEQRIGGFQ 480 >gi|254469801|ref|ZP_05083206.1| indoleacetamide hydrolase [Pseudovibrio sp. JE062] gi|211961636|gb|EEA96831.1| indoleacetamide hydrolase [Pseudovibrio sp. JE062] Length = 473 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 123/485 (25%), Positives = 220/485 (45%), Gaps = 49/485 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +E +R++ IS+ E++D ++ I+ + +NA KAR AAE +D+ I G Sbjct: 8 LTATEVAAAIRNRQISSAEVIDQHLARIDE-KAHLNAVTTRYDDKARKAAELADQAIERG 66 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+ IK+ +G T G ++ + ++L GA+ +G+ N Sbjct: 67 DELGPLHGVPVTIKENVDQEGASTNNGVKAFAGLIAKQDAPLVERLKRAGAIPIGRTNTP 126 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E + + +G ++PW TPGGSSGG+ +++A + + G+D GSIR Sbjct: 127 EMSWRFHTDNVLFGQTLNPWNP-----ALTPGGSSGGAGSSLAAGIGYIAHGSDLSGSIR 181 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFA--PSLDQ----AGIITRTVRDSAILLKAIAGYD 239 PA G +G++P++GR S A P Q G + R+V D + + GY Sbjct: 182 LPAFCCGVLGLRPSHGRIPFYNATSPAERPMTIQLSSAQGPLARSVDDLKLAYDVMRGYS 241 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D +LP D +++ ++ +T P + P I++ +Q L G K+ Sbjct: 242 DLD--TWSLPDMDEDKSYPNTVALIT---PPD-----ADPKINEVLKQAGEVLAQRGYKV 291 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 S+ Q A Y + E + ++ + I++ + + Sbjct: 292 ESSSIDFIQEAFDRYSSLLITEVA--------------LQKETIIDKFASE--------- 328 Query: 360 KHRIMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R + Y S D H Y RA R+ R + F++ VI+ P +AF G Sbjct: 329 QLRTVFEYYTQLSPPMDYHGYARALASRSHYHR-LIDQFQRKYPVIIAPVCTKNAFEAGA 387 Query: 419 EENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + + GS+ I + ++N LP++SVP+ + +P+G+QLIG + EE LF Sbjct: 388 DVKSVGSLEEIIKTTTYLGSMNFLDLPSMSVPSKEKHEGIPIGIQLIGPRYGEEYLFKTA 447 Query: 478 QIIEK 482 +++E+ Sbjct: 448 KVLER 452 >gi|311103247|ref|YP_003976100.1| amidase [Achromobacter xylosoxidans A8] gi|310757936|gb|ADP13385.1| amidase family protein 1 [Achromobacter xylosoxidans A8] Length = 449 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 199/462 (43%), Gaps = 55/462 (11%) Query: 37 SNSQMNAYIEVVAQK---ARAAAEESDK-RIINGDARDLEGIPIGIKDCFATKGIHTQAC 92 S ++A + +VA++ A A A D R I D L G+ +G+K CF +G T A Sbjct: 23 SADPVSAALALVARRDEDALAEARARDALRAIAPDDEPLAGMVLGVKACFDVRGWTTHAG 82 Query: 93 SHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S +L + Q L GAV+L + NM EFA G+ + +G +SP M Sbjct: 83 SQVLADAPAARRDAALVQALRRAGAVLLAQNNMTEFAYGALGLNARFGTPLSPL--MADV 140 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + GGSS G + AVA + + ++ +DT GS R PA+F G G KP+ GR G++ Sbjct: 141 PRVA-GGSSSGGAVAVAQGMVSLALASDTSGSARIPAAFCGVAGFKPSRGRYEDAGMMYL 199 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMT-----V 266 +P+ D GII ++ K +A +D +P P +QG T V Sbjct: 200 SPTFDVPGIIAADAAQCLLVDKVLAPWDAA------MPAP--------GVQGATPLASKV 245 Query: 267 GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 + ++ D L P + + + + L DAGA + S+P A + Sbjct: 246 FVVPDHVEDLLEPEVRRAFAAWLECLMDAGAALRRESMPCLALA-------------GKV 292 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 AR G+ + + + + + V R+++G V + Y+ A++ Sbjct: 293 ARDGGI---IAADAYALHASCLAADAARYDPRVGPRMLLGAQVPAH-----AYIAAQRRL 344 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIYNDVFTVAVNMAGL 443 ++R++ A G D +LTPT P P+ + +++ + G ++ T N L Sbjct: 345 ADLRREYDRAIA-GADAVLTPTVPMLPPPVAQLDDDDSYLRENGRAFS--LTEFANRLDL 401 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 P+IS+P K+ +GL G + L IE G Sbjct: 402 PSISIPGHRAAKQA-VGLMATGLRGGDRALLLAAAQIEDALG 442 >gi|322704459|gb|EFY96054.1| amidase [Metarhizium anisopliae ARSEF 23] Length = 491 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 135/507 (26%), Positives = 228/507 (44%), Gaps = 71/507 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGI 74 LR ++ E + + E + S +NA+I ++ +A AAA++ D I G+ L G+ Sbjct: 25 LRHHKLTVREHISEVLGRAERAKS-LNAFINLLPDQALAAADKIDAAIAKGEPLPPLAGL 83 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG--SS 132 I +KD G ++ L P + ++L GA+++GK N+ E A G S+ Sbjct: 84 AIVVKDNINMAGFPNTGGTNALLTACPSNTAPSLERLTAAGAIVIGKTNLHELAFGVTST 143 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + + GPV +P+ ++D PGGSSGG++AA+A + +GTDTGGS R PA+ TG Sbjct: 144 NLSPFAGPVRNPY-AID----MIPGGSSGGTAAAIASRVVTCGLGTDTGGSSRIPAALTG 198 Query: 193 TVGIKPTYGRCSRL-------GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 G +P+ G G++ + + D G + R+V D A+L I+G Sbjct: 199 IAGYRPSVGDGGEQRRYHDDHGVLPISHTRDTVGPMGRSVADVALLDSIISG-------- 250 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 RA ++G+ +GIP + L ++K L++AG ++V +P Sbjct: 251 -------RPRAKPAQLRGVRLGIPPVLWVG-LDKELEKIVLHAQHVLQEAGIELVRDDIP 302 Query: 306 H-TQYALPAYYIISPAEASSNLARY------DGVRYGLRVEG---KDILEMYENTRSIGF 355 + IS EA +++ Y DGVR ++G D+ ++ + F Sbjct: 303 DLLELDSTVGPPISLHEARTDIPAYLSGSGIDGVRLEDILDGISSPDVKPIFSSIVHGDF 362 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSAF 414 G E + V++ R R +++ + + F+Q VD IL PTT A Sbjct: 363 GHEYRQ-------VMAVR------------RPALQKLYADYFQQHRVDAILFPTTILPAT 403 Query: 415 PL------GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P+ G N G + T + AG+P +S+P +P+G+++ G Sbjct: 404 PIDIIHGSGNVSINGGPQMEAFAAYTRNTGPASNAGIPGLSIPVGKTADGLPVGIEIDGP 463 Query: 467 PFREETLFSVGQIIEKEAGYFR-PHKW 492 ++ L S+G +EK G P W Sbjct: 464 LGSDDRLLSLGLAMEKVLGCLPGPEPW 490 >gi|194292556|ref|YP_002008463.1| amidase [Cupriavidus taiwanensis LMG 19424] gi|193226460|emb|CAQ72409.1| putative amidase [Cupriavidus taiwanensis LMG 19424] Length = 451 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 131/485 (27%), Positives = 214/485 (44%), Gaps = 74/485 (15%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 ++RS A +LV +Q E + + +NA ++AQ A A A ++R G L G Sbjct: 14 QVRSGARRATDLVREALQRAEAA-APLNACSALLAQGALAQAAALERRRDQGRPLPPLAG 72 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK-------LWDNGAVMLGKLNMDE 126 +P +K+ +G T L G P + + L GAV + +MDE Sbjct: 73 VPFVVKNLLDVRGHAT------LAGAAPRAQEPAATRHADAVEALAAAGAVPVALASMDE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 +A G++ E GPV +P T GGSS G++A VA + +G+DT GSIR Sbjct: 127 YACGATGENVIGGPVRNPLDPARIT-----GGSSAGTAALVAAGVVPFGLGSDTNGSIRA 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G G++PT GR S G + +A SLD G + + D A+ A+ G D A Sbjct: 182 PAAFCGIWGLRPTTGRLSLAGCVPYAQSLDTVGPMAGSAGDLALAYAAMLGIDVAPAGQA 241 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + + + VG+ D+ P + Q + + A + I LP Sbjct: 242 S------------GVATLRVGVLGRGFSDFAEPAV----QAAVRRMASAFGAVRTIDLPD 285 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 A A +IS E G++ M + R G+ V+ RI+ G Sbjct: 286 ADAARDAASVISAYEV-----------------GRNHQAMDFSARHGGYSAFVRQRILAG 328 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS- 425 + YD+ AR ++ ++ F+ VD++L P+TP +A P+G E S Sbjct: 329 -LAMPREWYDT----ARLYQSAWRQRLLALFDD-VDLLLAPSTPYAATPIGAETVEGASR 382 Query: 426 -------MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 GH+ T +++AGLP ++ P A + +P+G+Q++ P++E + + + Sbjct: 383 LYRPRADAGHM-----TRPLSLAGLPVVAAPCA--GEGLPVGVQVVAPPWQESLVLAAAR 435 Query: 479 IIEKE 483 +E E Sbjct: 436 FLEAE 440 >gi|167563653|ref|ZP_02356569.1| amidase [Burkholderia oklahomensis EO147] Length = 458 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 125/476 (26%), Positives = 207/476 (43%), Gaps = 57/476 (11%) Query: 26 LVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFA 83 LV++ ++ I + Q A+ EV AQ ARA A+ D+ G L GIP+ +KD F Sbjct: 27 LVEAALERIADPAGQGAIAFTEVDAQGARATADAHDRLRAAGTVLSPLAGIPVSVKDLFD 86 Query: 84 TKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G T+A S +LD P ++ +L GAV++G+ NM EFA ++G Sbjct: 87 VEGQVTRAGSRVLDDAPPATVDAIAVARLKRAGAVLVGRTNMSEFAFSGLGLNPHFGTPR 146 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ G G KPT R Sbjct: 147 SPYRRGVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAALCGLTGFKPTASR 206 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 + G + + +LD G I +V A++ + +AG + P A + ++ Sbjct: 207 IPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLE-----------PHVPAA--RPLE 253 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 G+ +G+ Y D + + + + L+ AGA + E +P + Sbjct: 254 GVRLGVLTNYVTDGVDAHVAASLDAALKHLEAAGAIVSEARF-------------APLDR 300 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRIMIGTYVLSSRCYD 376 ++ R+ G +E Y R++ + V RI+ G + Sbjct: 301 LPDINRF----------GFSSIEAYAWHRTLIARHRDAYDPRVLARILKGEPASA----- 345 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF-- 434 + YL R + + Q D ++ PT P + + + E + + V Sbjct: 346 ADYLDLVAARAALVDEAARTIWQRFDALVAPTVPVAPPRIDELERDDDAFTRTNALVLRN 405 Query: 435 TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 A N A+S+P C + P+GL L P ++ L ++GQ +E R Sbjct: 406 PSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVEAVLATIR 458 >gi|302551650|ref|ZP_07303992.1| amidase [Streptomyces viridochromogenes DSM 40736] gi|302469268|gb|EFL32361.1| amidase [Streptomyces viridochromogenes DSM 40736] Length = 467 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 131/489 (26%), Positives = 205/489 (41%), Gaps = 36/489 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + + R + S VE + ++ E ++NA++ + A+ A A A ES+ Sbjct: 1 MTELTDLTAVRLLEGYRKGEWSPVEATRAALERAEAIQPEVNAFVRLTAEDALARARESE 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILD-GFRPHYESTVTQKLWDNGAVM 118 +R G+ L+G+P+ +KD +G T S ++ R ++ +L ++GAV Sbjct: 61 ERWRRGEPCGLLDGVPVTVKDILLLRGAPTLRGSKAVNPAGRWDEDAPSVARLREHGAVF 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK E+ ++ G +P+ + SSGGS+AAVA S+GT Sbjct: 121 IGKTTTPEYGWKGVTDSPLSGVTRNPYDRARTAGG-----SSGGSAAAVALGAGPLSLGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PASF G +KPTYGR +F +L G +TR D+A+L+ I Sbjct: 176 DGGGSVRIPASFCGIFALKPTYGRVPLYPASAFG-TLAHVGPMTRDAADAALLMDVIGHP 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + + P Y L + G+ V P + P + + ++ + L D GA Sbjct: 235 DSRDWSALAPPPGAYTDGLTGGVHGLRVAYSPSLGGQVAVRPEVARAVRRAVERLADLGA 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + E T P EA L R + + + R I Q Sbjct: 295 YVTEADPDFTD----------PVEAFHTLWFSGAARVTQHLGPQQRALLDPGLREI-CEQ 343 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++ + YL A +R R F D+++TPT P +AF G Sbjct: 344 GARYSAL-------------DYLAAVDVRMDHGRRMGR-FHDTYDLLVTPTMPITAFEAG 389 Query: 418 KE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E SG FT NM PA SVP +P+GLQL+ R++ + Sbjct: 390 AEVPKGSGHRRWTGWTPFTYPFNMTQQPAASVPVGFDGGGLPIGLQLVAARHRDDLVLRA 449 Query: 477 GQIIEKEAG 485 + EAG Sbjct: 450 AHAL-YEAG 457 >gi|163796098|ref|ZP_02190060.1| hypothetical protein BAL199_30007 [alpha proteobacterium BAL199] gi|159178557|gb|EDP63097.1| hypothetical protein BAL199_30007 [alpha proteobacterium BAL199] Length = 465 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 134/489 (27%), Positives = 204/489 (41%), Gaps = 46/489 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD- 60 ++L F + +E + +S VE + + IE N +NA+ + A+ A AAA ES+ Sbjct: 4 TDLAFWSATELLRGYATGTVSPVEATQAALARIEALNGTLNAFCLIDAEGALAAARESEA 63 Query: 61 ---KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGA 116 KR NG ++G+P IKD T+G T S +D P ++ +L ++GA Sbjct: 64 RWAKRTPNGL---VDGVPTSIKDLSPTRGWPTMRGSKAVDPKGPWEIDAPFVARLREHGA 120 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V LGK EF + + G +PW TPGGSSGG++ A A + A Sbjct: 121 VFLGKTTTPEFGWKGVTDNALTGITRNPWDPSK-----TPGGSSGGAAVAAATGMGALHQ 175 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+D GGSIR PA +TG GIKPT+G+ + F ++ G +TRTV DSA++L + Sbjct: 176 GSDGGGSIRMPAGYTGVYGIKPTFGKVPAYPLSPFG-TVAHIGPLTRTVADSALMLAVMG 234 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D + D RA+ S++G + + P I + + G Sbjct: 235 EPDARDWYALPDDGSDPRRAVTASVKGWRIAYCPVLGNADVHPEIAAMVKAAAQAFVELG 294 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A + EI P ++ R ++ F Sbjct: 295 ATVEEIEAPIAD-------------------SHETFRKHWFTGAANLF--------TAFN 327 Query: 357 QEVKHRIMIGTYVLSSRCYDS---HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 E K I G +++ YL A K R + + F + DV+LTPT P A Sbjct: 328 AEQKKLIDPGLQQIAAEGAAFTLLEYLAAVKEREAMGTAMS-LFHETYDVLLTPTLPIPA 386 Query: 414 FPLGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 F G E SG F+ N+ PA S+P +P GLQ++ R++ Sbjct: 387 FEAGHEVPPGSGLTRWTEWTPFSYPFNLTQQPAASIPCGRTSDGLPAGLQIVATKGRDDK 446 Query: 473 LFSVGQIIE 481 + + E Sbjct: 447 VLTASAAYE 455 >gi|310772412|dbj|BAJ23974.1| benzamide amidohydrolase [uncultured bacterium] Length = 477 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 140/483 (28%), Positives = 221/483 (45%), Gaps = 56/483 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R+ ISA E V S + IE +N +NA +EV A++A AAA+++D+ + GDA L G+ Sbjct: 22 VRTGSISAREAVQSSLDRIEQTNGALNAIVEVSAKEALAAADDADRMVKRGDALGPLHGV 81 Query: 75 PIGIKDCFATKGIHTQACSH-ILDGFRPHYESTV-------TQKLWDNGAVMLGKLNMDE 126 PI IK ++T H +DG P ++ V + L D G +M+G+ N Sbjct: 82 PITIK-------MNTDQAGHATVDGV-PAFKDAVATVDAPQVKSLRDAGGIMVGRTNTPA 133 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F++ +G ++PW TPGGSSGG+S++VA + S D GGSIR Sbjct: 134 FSLRWFANNDVFGRTLNPW-----NKDHTPGGSSGGASSSVAAGMVPISHANDIGGSIRY 188 Query: 187 PASFTGTVGIKPTYGRCSRL-------GIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 PA G G++PT GR S +SF S+ G I R+V D + L+A+A D Sbjct: 189 PAYACGVYGLRPTVGRVSGWVGPADGDQSLSFQ-SMWVQGPIARSVSDLRLGLQAMAQPD 247 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D P P + L + I+ VG+ + + L P + + + WLKDAG +I Sbjct: 248 YRDPWFA--PAPLSGQPLRRPIK---VGVVRGEEIVKLHPGVAQAMDKAAGWLKDAGYQI 302 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EI +P + A +Y++ E + + EG D + T Q Sbjct: 303 EEIQVPAFEEAYKLWYLLCIEELRPQVPL-------MHREGDDGIRGVFETYFAAAKQWW 355 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + Y+ + + +K I RD+ ++L P + F + Sbjct: 356 PEAPTLEDYMAGYARRGTLIAQVQK----ILRDYP--------ILLLPISAEPPFEQDAD 403 Query: 420 E-NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + I + +A+ M LP IS P + E +P G+Q+IG FRE+ L + G+ Sbjct: 404 YLNRDRGVEVIRANWGAMAIPMLSLPGISAPVHVFE-GLPCGVQMIGPKFREDILLAAGE 462 Query: 479 IIE 481 ++E Sbjct: 463 VLE 465 >gi|254700204|ref|ZP_05162032.1| amidase [Brucella suis bv. 5 str. 513] gi|261750697|ref|ZP_05994406.1| amidase [Brucella suis bv. 5 str. 513] gi|261740450|gb|EEY28376.1| amidase [Brucella suis bv. 5 str. 513] Length = 462 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 137/498 (27%), Positives = 220/498 (44%), Gaps = 50/498 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLD--YLSPTIDKT---WQQGISWL 292 D D ++LP D + LD ++G+ +G+ LD + P +T + Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL----WLDAGFGEPVGGETRAAVEAAAKLF 284 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTR 351 DAGA II P N DG+ R+ DI +M + Sbjct: 285 ADAGA------------------IIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQ 326 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++ I T + YL ++ + R+ A + D I++PT P Sbjct: 327 A-----KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPM 379 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +P + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + Sbjct: 380 PTYPAEWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDL 439 Query: 472 TLFSVGQIIEKEAGYFRP 489 + + + E RP Sbjct: 440 GVLRLAKAYEDMRPVQRP 457 >gi|161618549|ref|YP_001592436.1| amidase [Brucella canis ATCC 23365] gi|225852103|ref|YP_002732336.1| amidase [Brucella melitensis ATCC 23457] gi|254693340|ref|ZP_05155168.1| amidase [Brucella abortus bv. 3 str. Tulya] gi|254701369|ref|ZP_05163197.1| amidase [Brucella suis bv. 5 str. 513] gi|254707710|ref|ZP_05169538.1| amidase [Brucella pinnipedialis M163/99/10] gi|254709707|ref|ZP_05171518.1| amidase [Brucella pinnipedialis B2/94] gi|256031198|ref|ZP_05444812.1| amidase [Brucella pinnipedialis M292/94/1] gi|256044283|ref|ZP_05447187.1| amidase [Brucella melitensis bv. 1 str. Rev.1] gi|256060706|ref|ZP_05450870.1| amidase [Brucella neotomae 5K33] gi|256113116|ref|ZP_05453993.1| amidase [Brucella melitensis bv. 3 str. Ether] gi|256159296|ref|ZP_05457091.1| amidase [Brucella ceti M490/95/1] gi|256254606|ref|ZP_05460142.1| amidase [Brucella ceti B1/94] gi|256264387|ref|ZP_05466919.1| amidase [Brucella melitensis bv. 2 str. 63/9] gi|260168334|ref|ZP_05755145.1| amidase [Brucella sp. F5/99] gi|260563637|ref|ZP_05834123.1| amidase [Brucella melitensis bv. 1 str. 16M] gi|260566837|ref|ZP_05837307.1| amidase [Brucella suis bv. 4 str. 40] gi|261213589|ref|ZP_05927870.1| amidase [Brucella abortus bv. 3 str. Tulya] gi|261221781|ref|ZP_05936062.1| amidase [Brucella ceti B1/94] gi|261315204|ref|ZP_05954401.1| amidase [Brucella pinnipedialis M163/99/10] gi|261317239|ref|ZP_05956436.1| amidase [Brucella pinnipedialis B2/94] gi|261324697|ref|ZP_05963894.1| amidase [Brucella neotomae 5K33] gi|261751907|ref|ZP_05995616.1| amidase [Brucella suis bv. 5 str. 513] gi|261757795|ref|ZP_06001504.1| amidase [Brucella sp. F5/99] gi|265988278|ref|ZP_06100835.1| amidase [Brucella pinnipedialis M292/94/1] gi|265990694|ref|ZP_06103251.1| amidase [Brucella melitensis bv. 1 str. Rev.1] gi|265994526|ref|ZP_06107083.1| amidase [Brucella melitensis bv. 3 str. Ether] gi|265997745|ref|ZP_06110302.1| amidase [Brucella ceti M490/95/1] gi|294851944|ref|ZP_06792617.1| aspartyl-tRNA(Asn)/glutamyl-tRNA amidotransferase subunit A [Brucella sp. NVSL 07-0026] gi|161335360|gb|ABX61665.1| Indoleacetamide hydrolase [Brucella canis ATCC 23365] gi|225640468|gb|ACO00382.1| Indoleacetamide hydrolase [Brucella melitensis ATCC 23457] gi|260153653|gb|EEW88745.1| amidase [Brucella melitensis bv. 1 str. 16M] gi|260156355|gb|EEW91435.1| amidase [Brucella suis bv. 4 str. 40] gi|260915196|gb|EEX82057.1| amidase [Brucella abortus bv. 3 str. Tulya] gi|260920365|gb|EEX87018.1| amidase [Brucella ceti B1/94] gi|261296462|gb|EEX99958.1| amidase [Brucella pinnipedialis B2/94] gi|261300677|gb|EEY04174.1| amidase [Brucella neotomae 5K33] gi|261304230|gb|EEY07727.1| amidase [Brucella pinnipedialis M163/99/10] gi|261737779|gb|EEY25775.1| amidase [Brucella sp. F5/99] gi|261741660|gb|EEY29586.1| amidase [Brucella suis bv. 5 str. 513] gi|262552213|gb|EEZ08203.1| amidase [Brucella ceti M490/95/1] gi|262765639|gb|EEZ11428.1| amidase [Brucella melitensis bv. 3 str. Ether] gi|263001478|gb|EEZ14053.1| amidase [Brucella melitensis bv. 1 str. Rev.1] gi|263094681|gb|EEZ18460.1| amidase [Brucella melitensis bv. 2 str. 63/9] gi|264660475|gb|EEZ30736.1| amidase [Brucella pinnipedialis M292/94/1] gi|294820533|gb|EFG37532.1| aspartyl-tRNA(Asn)/glutamyl-tRNA amidotransferase subunit A [Brucella sp. NVSL 07-0026] gi|326408598|gb|ADZ65663.1| amidase [Brucella melitensis M28] gi|326538318|gb|ADZ86533.1| indoleacetamide hydrolase [Brucella melitensis M5-90] Length = 445 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 124/428 (28%), Positives = 186/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 168 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 225 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 226 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 274 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 275 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 326 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 361 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 362 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 419 Query: 475 SVGQIIEK 482 + IEK Sbjct: 420 AAALSIEK 427 >gi|225627080|ref|ZP_03785118.1| Indoleacetamide hydrolase [Brucella ceti str. Cudo] gi|17983355|gb|AAL52541.1| glutamyl-tRNA(gln) amidotransferase subunit a [Brucella melitensis bv. 1 str. 16M] gi|225617915|gb|EEH14959.1| Indoleacetamide hydrolase [Brucella ceti str. Cudo] Length = 471 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 124/428 (28%), Positives = 186/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 79 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 138 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 139 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 194 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 251 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 252 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 300 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 301 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 351 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 352 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 387 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 388 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 445 Query: 475 SVGQIIEK 482 + IEK Sbjct: 446 AAALSIEK 453 >gi|271968564|ref|YP_003342760.1| amidase [Streptosporangium roseum DSM 43021] gi|270511739|gb|ACZ90017.1| amidase [Streptosporangium roseum DSM 43021] Length = 477 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 138/507 (27%), Positives = 215/507 (42%), Gaps = 49/507 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ ++ + E ++ ++IS VE+ + Y+ I + ++ AY V ++ A A + + Sbjct: 1 MAHIHDLTALEQAAAVKRREISPVEIAEHYLDRIARLDPEVGAYATVTSELALEQAHKVE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R++ G D+ L G+PI IKD K + S F + +V ++L D G +ML Sbjct: 61 ARVLAGEDSSPLLGVPIPIKDLNLVKDVPIHFGSATYGDFVAPVDDSVVERLRDAGTIML 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF + ETS P +PW S SSGG++AAVA L A+ G+D Sbjct: 121 GKTATPEFGLSCYTETSLSPPTRTPWDLSRSAGG-----SSGGAAAAVAAGLAPAAQGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GSIR PAS G GIKPT GR S II L G ITRTV D+A LL + + Sbjct: 176 GAGSIRIPASVCGLYGIKPTRGRISFAPIIPDLAGLSTNGPITRTVADAAALLDVMTHDN 235 Query: 240 ECDATCVNLP-VPDYERALDQSIQGMTVGIPKEYRLD--YLSPTIDKTWQQGISWLKDAG 296 D P + +E + + + + E + + P + ++ + L G Sbjct: 236 PGDLYYAPPPALGSFEAYVGRDPGRLRIARYAEPLVPGTEVDPEVLAAYEHASAELAALG 295 Query: 297 AKIVEISLPHTQYALPAYYIISPAEA---SSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 ++V+I+ P +P + + A A +L++ D +R + R Sbjct: 296 HEVVDIAPPFAPELVPQFVTLWYAFACMHPVDLSKQDRLR-----------PLTAWLRER 344 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GF +L+A+ L R F D +LTPT S Sbjct: 345 GFATPAP-----------------DFLQAQSALQLATR-FGLMVTDLYDAVLTPTVTQSP 386 Query: 414 FPLGKEENNSGSMGHIYN----DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P+G E+ F N++G PA+++P +P+G+ L G+ Sbjct: 387 RPVGWFEDVESPEETFERMKRFAAFPAIYNISGQPAVNLPLHWTPDGLPIGVMLAGRFGD 446 Query: 470 EETLFSVGQIIEKEAGYF----RPHKW 492 E TL SV +E G F RP W Sbjct: 447 EGTLISVSAQVESARGGFWGERRPAVW 473 >gi|254712764|ref|ZP_05174575.1| amidase [Brucella ceti M644/93/1] gi|254715833|ref|ZP_05177644.1| amidase [Brucella ceti M13/05/1] gi|261217594|ref|ZP_05931875.1| amidase [Brucella ceti M13/05/1] gi|261320471|ref|ZP_05959668.1| amidase [Brucella ceti M644/93/1] gi|260922683|gb|EEX89251.1| amidase [Brucella ceti M13/05/1] gi|261293161|gb|EEX96657.1| amidase [Brucella ceti M644/93/1] Length = 462 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 132/485 (27%), Positives = 217/485 (44%), Gaps = 40/485 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++LP D + LD ++G+ +G+ +L + + +A A Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL-------WLDAGFGEPVEGETRAAVEAAA 281 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFG 356 K+ A II P N DG+ R+ DI +M ++ Sbjct: 282 KLFA----------DAGAIIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQA---- 327 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ I T + YL ++ + R+ A + D I++PT P +P Sbjct: 328 -KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPMPTYPA 384 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + + + Sbjct: 385 EWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDLGVLRL 444 Query: 477 GQIIE 481 + E Sbjct: 445 AKAYE 449 >gi|91976316|ref|YP_568975.1| amidase [Rhodopseudomonas palustris BisB5] gi|91682772|gb|ABE39074.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 477 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 116/478 (24%), Positives = 201/478 (42%), Gaps = 39/478 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR--AAAEESDKRIINGDARDL 71 DRL S D++ ++L+D+ Q I + +NA + +AR AAA + G L Sbjct: 17 DRLESGDVTPLDLLDALEQRIAEVDGAVNALPTLCFDRARERAAALMKKPKAQRGL---L 73 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ IKD A +G+ T S I P + ++L NG V+ K N EF G+ Sbjct: 74 AGLPVPIKDLTAVEGVLTTQGSPIYKDHVPDRSDLMVEQLEANGGVVYAKSNTPEFGAGA 133 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + +G +PW S SSGG++ A+A + G+D GGS+R PASF Sbjct: 134 NTFNEVFGATRNPWDLSRSAAG-----SSGGAAVALATGTAWLAHGSDMGGSLRNPASFC 188 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG++P++GR + +L G + R V D A+LL A++G D + P Sbjct: 189 GVVGLRPSFGRVAHTPTAKIDRNLGVQGPMARNVEDVALLLDAMSGEHAADPLSLPSPAT 248 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + A + + V + + + P + ++ +AG + E + P + A Sbjct: 249 SFLAAARARTKPLRVAYSPDLGITPVDPEVAAITRRAAERFIEAGVTVDE-AQPDLREAH 307 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + ++ + + D+L ++ + + L+ Sbjct: 308 DCFQVLR--------------AFDFAISKADLLRTQRELLKPEVIWNIEQGLKLSVDELA 353 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE---ENNSGSMGH 428 + AR I F + D++L P T T+ FP+ + E N + + Sbjct: 354 KAEAQRVAMAARTIE----------FFKTYDLLLCPATITAPFPIEQRYLAECNGKTFDN 403 Query: 429 IYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + V A+ + PA+S+P +P+GLQ+I +P E L + ++E G Sbjct: 404 YVEWLGIVYAITLVCCPALSLPCGFTATGLPVGLQIIARPRNESGLLAGAAVLEDILG 461 >gi|163856545|ref|YP_001630843.1| amidase [Bordetella petrii DSM 12804] gi|163260273|emb|CAP42575.1| putative amidase [Bordetella petrii] Length = 451 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 139/497 (27%), Positives = 213/497 (42%), Gaps = 80/497 (16%) Query: 16 LRSKDISAVELVDSYI-QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 L+ S+V L ++ + +A + + + V A +ARAAA+ SD G AR ++G Sbjct: 12 LQQGSTSSVALTEAALARAQDPAGEGARVFTRVYADQARAAAQASDMLRAAGLARSPIDG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ IKD F G T A S G E + V Q+L GAV++G+ NM EFA Sbjct: 72 LPVSIKDLFDVAGETTLAGSVARQGEPAADEHAVVVQRLLAAGAVIIGRTNMVEFAYSGL 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG ++PW D PGGSS G++ +V + +IG+DTGGS+R PA+ G Sbjct: 132 GINPHYGTPLNPW---DRATGRIPGGSSSGAAVSVTDGMALGAIGSDTGGSVRIPAALCG 188 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KP+ R S G++ + SLD G + TVR A L +AG DE V + Sbjct: 189 LAGFKPSAWRVSMAGVLPLSTSLDSIGPLAPTVRCCATLDAILAG-DE---------VAE 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--TQYA 310 ++ A + G+ + +P LD + + + + +S L AGA+I EI +P A Sbjct: 239 WQPA---ELDGLRLAVPTTLALDGMDAHVSQAFADALSRLSAAGARIEEIEVPEFAQLAA 295 Query: 311 LPAYYIISPAEA--------SSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFGQ 357 + A + +EA + RYD +R G + D L++ + + + Sbjct: 296 INAKGGFTASEAWGWHRDLIARKADRYDPRVVSRIRRGQEMSAADYLDLLDAREA--WVA 353 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 V+HRI + Y D +L PT P +A P Sbjct: 354 AVEHRI-------------ARY----------------------DALLLPTVPVAA-PTV 377 Query: 418 KEENNSGSMGHIYNDVFT---VAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREET 472 E S + N + +N A SVP C P GL + G + Sbjct: 378 AEVTASDDAYYAANGLILRNPTLINFLDGCAASVP---CHSPGSAPAGLMVAGANGADRR 434 Query: 473 LFSVGQIIEKEAGYFRP 489 + S+ IE G+ P Sbjct: 435 ILSISMAIEDLLGFPHP 451 >gi|307154557|ref|YP_003889941.1| amidase [Cyanothece sp. PCC 7822] gi|306984785|gb|ADN16666.1| Amidase [Cyanothece sp. PCC 7822] Length = 469 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 134/500 (26%), Positives = 222/500 (44%), Gaps = 53/500 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + E +R + IS +ELV+ Y+ IE N Q+ ++ + A A + A+ + Sbjct: 5 DLAFTSALEQAKLIRERQISPLELVEIYLARIERLNPQVGSFFHLAADAAISEAKAKTEF 64 Query: 63 IING-DARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRP---HYESTVTQKLWDNG 115 + N D +L G+P IKD A G+ CS+ + + +Y+ V ++ G Sbjct: 65 LANNQDLCNLPLFFGVPTAIKDLNAVAGM---PCSYGVAALKDNIVNYDDGVVTRIKQAG 121 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 ++LGK + E + P +PW ++D +T GGSSGG+++AVA LCA + Sbjct: 122 LIILGKTATSQLGSFPYTEPPNFEPARTPW-NLD----YTAGGSSGGAASAVAAGLCALA 176 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 G+D GGSIR PA G VGIKP GR S I F + G + RTV D+A L + Sbjct: 177 QGSDGGGSIRGPALCCGLVGIKPARGRISNAPIGDFQSGIATNGPLARTVADAAAFLDVM 236 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKD 294 +GY D + P + A + + + + P P + + ++ L++ Sbjct: 237 SGYTTGDPYWLPEPKMSFLAATGEDVGQLRIAFSPSLAGFPESVPIVGQAVRETAKRLEE 296 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G IVE + + L + I+ + ++ G+ +E L + + Sbjct: 297 MG-HIVEEGCFNVEGLLEPFKIVWQSGVAAA---------GIPLELLCPLNQWLGEQQTS 346 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 GQ YL+A + +I R AF Q DV++ P A Sbjct: 347 AGQ---------------------YLQAVRTLQMISRSLV-AFFQEYDVLVLPVYLHQAI 384 Query: 415 PLGKEEN--NSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +G+ EN ++ + N V N +GLPAI++P E +P+ +QL+G E Sbjct: 385 RIGEWENLPPQETLEKMINWVAPCPPCNASGLPAITIPTGFDENGLPIAVQLVGGAADEI 444 Query: 472 TLFSVGQIIE--KEAGYFRP 489 TL ++ +E ++RP Sbjct: 445 TLIALAAQLEALNPWSHYRP 464 >gi|94499474|ref|ZP_01306011.1| Amidase [Oceanobacter sp. RED65] gi|94428228|gb|EAT13201.1| Amidase [Oceanobacter sp. RED65] Length = 603 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 213/492 (43%), Gaps = 47/492 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ M++ R I+ L+DS ++ E N + +++++ A ++ Sbjct: 1 MNTTTNMSIESLRQEYLKGQITPDALIDSILEKCEGYQ-DYNIWTHLLSKQEIAPYIDAL 59 Query: 61 KRIINGDARD--LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAV 117 K N D L GIP IKD GI T A C F P + V KL + GA+ Sbjct: 60 K---NKKPEDYPLWGIPFAIKDNIDLAGIKTTAACPEF--AFLPDSSAYVVSKLIEAGAI 114 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +GK N+D+FA G + S YGPV + ++ + GGSS GSS AVA L + S+G Sbjct: 115 PIGKTNLDQFATGLNGTRSPYGPVKNSFKP-----DYISGGSSSGSSVAVALGLVSFSLG 169 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDT GS R PA F VG KP+ G S G++ SLD I + D+ +L A G Sbjct: 170 TDTAGSGRVPACFNNLVGTKPSIGLLSATGMLPACKSLDCMTIFSLNTDDANTVLSAAEG 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWL-KDA 295 YDE DA + + R Q+ Q + +GI + L++ S ++ + Q I + + Sbjct: 230 YDETDAYSRHNVYDNKPRHYGQNAQALKIGIVAKSDLNFFGSKEYEEAYWQSIDKIASNP 289 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 ++VE+ SP ++ L Y G R +E T+ Sbjct: 290 NIELVEVDF-------------SPFLQAAQLL-YQGPWVAERYVA---IENMIQTQPDAI 332 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT--PTSA 413 V+ I G + ++ C+ + Y K+ L + + VD +LTPT P + Sbjct: 333 HPAVRKIIEPGGSLTATDCFKAQY----KLAAL--KTICDEILNSVDCLLTPTAGRPYTI 386 Query: 414 FPLGKEE-NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 L +E + +G+ +T +N+ A++ P P GL L+G + Sbjct: 387 QELLEEPIQYNNELGY-----YTNYMNLLDYSAVAFPTTFTSSGFPFGLTLVGNAMEDRK 441 Query: 473 LFSVGQIIEKEA 484 L S+ + E+ Sbjct: 442 LLSIARRFHGES 453 >gi|290954870|ref|YP_003486052.1| amidase [Streptomyces scabiei 87.22] gi|260644396|emb|CBG67481.1| putative amidase [Streptomyces scabiei 87.22] Length = 477 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 133/509 (26%), Positives = 230/509 (45%), Gaps = 60/509 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +LN+++ E R +++S VE++DS I+ + + ++NA E + +A A ++ R Sbjct: 2 DLNYLSAEEMLGAFRRRELSPVEVLDSLIERVSKTG-EVNAVAEEMFDEAHEVARAAEAR 60 Query: 63 II-NGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G A R LEG+P+ +K+ G + S + +G + Q+L D GAV+ Sbjct: 61 YAGKGPAPRALEGVPVAVKEEMPIAGRSHRLGSLLTEGTVATRTQPMVQRLIDAGAVLHL 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + EF++ + + +G +PW ++D ++PGGSSGGS AA+A L + G+D Sbjct: 121 RTTTPEFSIAVTTHSELWGVTRNPW-NLD----YSPGGSSGGSGAALAAGLAPLATGSDI 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR P++ G VG +P YGR L +SF + Q G + RTV D A+ IAG D Sbjct: 176 AGSIRVPSALCGVVGFRPPYGRVPSLPPLSFD-TYCQDGPMARTVTDCALFQNVIAGPDL 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V++P S G+ V + + P ++ + L+DAGA++ Sbjct: 235 VDH--VSVPAAPPLPTTFGSCAGLKVALAVTIGDFPVVPEAAANIERFANALRDAGAEVT 292 Query: 301 EISLPHTQYALP----AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-RSIG- 354 + +P T+ ++ A+Y + + A D R+ V D++E E + +G Sbjct: 293 PVEIPITRQSIMATAFAHYGLLLGPSVRECAPADDPRWSRNV--LDVVEASEAALKKLGA 350 Query: 355 ---FGQEVK-HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 F +E + H ++ G Y RD D ++ PT Sbjct: 351 LRTFEEEGRMHAVLAGIY----------------------RDH--------DALICPTLA 380 Query: 411 TSAFPLGKEENNSGSM------GHIYNDVFTVAVNMAGL-PAISVPAALCEKKMPLGLQL 463 T+ +P S + ++ + T N+A P ++VP+ +P G+Q+ Sbjct: 381 TTGYPADATSAESVELAEGVRFANLVSQCLTQLFNIASRHPVLNVPSGRAGNGVPTGVQI 440 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRPHKW 492 + +PF + T F +G E G + W Sbjct: 441 VARPFDDLTAFRLGAAAEARLGLWSDPDW 469 >gi|167570815|ref|ZP_02363689.1| amidase [Burkholderia oklahomensis C6786] Length = 458 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 125/476 (26%), Positives = 207/476 (43%), Gaps = 57/476 (11%) Query: 26 LVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFA 83 LV++ ++ I + Q A+ EV AQ ARA A+ D+ G L GIP+ +KD F Sbjct: 27 LVEAALERIADPAGQGAIAFTEVDAQGARATADAHDRLRAAGTVLSPLAGIPVSVKDLFD 86 Query: 84 TKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G T+A S +LD P ++ +L GAV++G+ NM EFA ++G Sbjct: 87 VEGQVTRAGSRVLDDAPPATVDAIAVARLKRAGAVLVGRTNMSEFAFSGLGLNPHFGTPR 146 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ G G KPT R Sbjct: 147 SPYRRGVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAALCGLTGFKPTASR 206 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 + G + + +LD G I +V A++ + +AG + P A + ++ Sbjct: 207 IPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLE-----------PHVPAA--RPLE 253 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 G+ +G+ Y D + + + + L+ AGA + E +P + Sbjct: 254 GVRLGVLTNYVTDGVDAHVAASLDAALKHLEAAGAIVSEARF-------------APLDR 300 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRIMIGTYVLSSRCYD 376 ++ R+ G +E Y R++ + V RI+ G + Sbjct: 301 LPDINRF----------GFSSIEAYAWHRTLIARHRDAYDPRVLARILKGEPASA----- 345 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF-- 434 + YL R + + Q D ++ PT P + + + E + + V Sbjct: 346 ADYLDLVAARAALVDEAARTVWQRFDALVAPTVPVAPPRIDELERDDDAFTRTNALVLRN 405 Query: 435 TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 A N A+S+P C + P+GL L P ++ L ++GQ +E R Sbjct: 406 PSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVEAVLATIR 458 >gi|255933756|ref|XP_002558257.1| Pc12g14520 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582876|emb|CAP81079.1| Pc12g14520 [Penicillium chrysogenum Wisconsin 54-1255] Length = 519 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 130/449 (28%), Positives = 201/449 (44%), Gaps = 55/449 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFR---PHYESTVTQKLWDNGAVMLGKLNMDEF 127 LEG + +KD + C D FR PH ++TV ++ + G ++ GK + Sbjct: 90 LEGKTLCLKDNICVASV---PCLLGTDTFRDWVPHTDATVVSRILNAGGIITGKAVCENL 146 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + G+ + T+ GPV +P+ S SS G++A VA IG D GGSIR P Sbjct: 147 SRGAVSSTAATGPVHNPYARGYSVGG-----SSSGTAALVASGATDMGIGCDQGGSIRIP 201 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---AT 244 A+ G G KPT G GI S SLD G IT T D+A+LL+AIAG D D A Sbjct: 202 AALAGLYGFKPTAGLVPYTGIASNDASLDYVGPITTTCLDNAVLLEAIAGADGLDDRSAA 261 Query: 245 CVNLP--VPDYERALDQS----IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 + P VP Y L +S I+G+ +GI KE I++ ++ ++ L+ GA Sbjct: 262 GIPFPTGVPRYSHLLRESSAAGIKGLRIGILKEGLPPQTDLNIEEKFRNAVNALERLGAS 321 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRSIGFGQ 357 + E+S+P + Y ++S N G G R V D+ E + + + Sbjct: 322 VQEVSVPLHSHGRSIYSVVS---KMGNHMGMMGQATGRRQVMLTDLFE----RKGLPYTP 374 Query: 358 EVKHRIMIGTY--VLSSRC----YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-- 409 +V +++ G +LS Y + Y +A I +K D + VDV++ PTT Sbjct: 375 DVVSKVISGPKEALLSGEFAWQRYGTVYPKAVNIMRKLK-DMYDDILSSVDVMVMPTTLL 433 Query: 410 -----PTS-AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------KM 457 P S A PL + E G + T N G PA+++P ++ Sbjct: 434 PANRLPVSDATPLVQMEAAKGMTEN------TCQFNATGHPALAIPIGYVPATGDKNVQL 487 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGY 486 P +Q++G+ E T+F + E+ + Sbjct: 488 PASMQIVGRWHDELTIFRLANTWERSINW 516 >gi|158425811|ref|YP_001527103.1| amidase [Azorhizobium caulinodans ORS 571] gi|158332700|dbj|BAF90185.1| putative Glu-tRNA amidotransferase [Azorhizobium caulinodans ORS 571] Length = 449 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 134/284 (47%), Gaps = 19/284 (6%) Query: 26 LVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIKDCFA 83 LV++ + I + + A+I V ++ARAAA+ D R GIP+ IKD F Sbjct: 23 LVEACLARISDPAGEGTRAFISVAGEQARAAADGQDALRRAGAAPSPFAGIPVAIKDLFD 82 Query: 84 TKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 G T + S +L P ++T +L + G V++G+ NM EFA +YG Sbjct: 83 VAGEVTTSGSKVLASNTPATADATAVARLRNAGFVVIGRSNMVEFAYSGLGLNPHYGTPK 142 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 SPW+ + PGGS+ G + AVA ++GTDTGGS R PA+F G G KPT R Sbjct: 143 SPWKR---DEGRVPGGSTSGGAVAVADGFAHLALGTDTGGSCRIPAAFCGITGYKPTASR 199 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 + G + + SLD G + R+V A DA PV E A + Sbjct: 200 VPQEGCLPLSQSLDSIGPLGRSV----------ACCAAADAILAGAPVTALEPA---DLS 246 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 G+ +P LD L P + ++ ++ + AGA+IV +P Sbjct: 247 GLRFLVPATVALDALDPEVASAFEAAVARISKAGARIVTAPVPE 290 >gi|163792973|ref|ZP_02186949.1| Amidase [alpha proteobacterium BAL199] gi|159181619|gb|EDP66131.1| Amidase [alpha proteobacterium BAL199] Length = 484 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 135/504 (26%), Positives = 227/504 (45%), Gaps = 40/504 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ F++ ++ R+R + I EL+D + +E N MNA + + ++ARA A+ +D Sbjct: 1 MPDIAFLSATQLAARIRERRIGCRELLDHMLDRVERYNPSMNAIVVLDVERARARADAAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + GD L G+P+ IK+ + +G+ T L R +STV +++ + G V+ Sbjct: 61 AALARGDVWGPLHGVPMTIKESYDVEGLPTTWGLPTLADNRAVRDSTVVRRMREAGVVLF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ + YG +PW TPGGSSGGS+AA+A L G+D Sbjct: 121 GKTNVPVLLADWQSYNPVYGSTGNPWDL-----SRTPGGSSGGSAAALAAGLTGIDAGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCS-----RLGIISFAPSLDQAGIITRTVRDSAILLKA 234 G SIR PA + G G KPTYG S G+++ A + G + R+ D L Sbjct: 176 IGASIRNPAHYCGVYGHKPTYGIVSPRGHATPGVLAQA-DISVVGPLARSAEDLETALDV 234 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +AG D D C L +P R + + + + P + D L+ + Q+ + L Sbjct: 235 MAGADGLDGECWRLNLPTDVRTQPREFRAAVMLTDPNCAQDDDLTAKL----QETVDALT 290 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G + + + P I A+++ AR Y + L + E Sbjct: 291 RIGVTVSDTARPAVDTTESHRLYIHLLRAATS-ARMSDADYA------EQLALSETAEPD 343 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 +G + M+ V ++LRA + RT ++ + F + DV+L PT ++A Sbjct: 344 DYG----YLPMVARAVTQPH---RNWLRAHERRTHLREAWARFFHEW-DVLLCPTAASTA 395 Query: 414 FPLGKEENN-------SGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIG 465 FP +E +G + +F + ++ LP+ P L + +P GLQ+I Sbjct: 396 FPHQQEGQRHERTILINGRPQPTVDQLFWAGLSSVVYLPSTVAPVGLAKDGLPCGLQIIA 455 Query: 466 QPFREETLFSVGQIIEKEAGYFRP 489 R++T + ++IE+E G F P Sbjct: 456 GHGRDKTALAFAKMIERELGGFVP 479 >gi|33591385|ref|NP_879029.1| amidase [Bordetella pertussis Tohama I] gi|33571027|emb|CAE40510.1| amidase [Bordetella pertussis Tohama I] gi|332380786|gb|AEE65633.1| amidase [Bordetella pertussis CS] Length = 417 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 125/477 (26%), Positives = 210/477 (44%), Gaps = 88/477 (18%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN ++ SE+ L +D++A +L + + IE ++ A+ + AAA E D+ Sbjct: 3 LNRISASEAARLLNRRDLTAEQLARACLARIEQREPEVQAWTALRPDAVLAAARELDRGP 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I G L G+P+G+KD F T + T S I +P ++ D GA++LGK Sbjct: 63 IRGV---LHGLPLGVKDMFDTADLPTAYGSGIYQSHQPRADAAAVALCRDAGALVLGKTA 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA T + GP +P +TPGGSS GS+AAVA + ++GT T GS Sbjct: 120 TTEFA------TYHPGPTRNP-----RNTAYTPGGSSSGSAAAVADDMVPLALGTQTAGS 168 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 + +PA++ G VG KP++GR SR G+ S A +LD G+ R+V D A+L A+ DA Sbjct: 169 VIRPAAYCGVVGYKPSFGRISRAGLKSLAETLDTVGMFARSVDDVALLASALMR----DA 224 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 L R V + + + + P +++ L AGA + E++ Sbjct: 225 RLRELRYDGTPR----------VAMFRSPQWRHTLPETRPAFERAARALSQAGAVVEELA 274 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P + GL D++ YE +++ F + + + Sbjct: 275 PPPNEDC------------------------GLAQLHSDVMA-YEAAQALAF-ERIHYPS 308 Query: 364 MIGTYV---------LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + T + L++ Y +H +A + R + + Q DV+L P+ Sbjct: 309 QLSTKLAAMLEAGAALTAEQYLAHLAQAGQARAKVAE-----WLQRYDVLLAPSA----- 358 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +F A + G+P + +P A + +P+GLQ++G FR++ Sbjct: 359 --------------TGDPLFCRAWTLFGVPCVHLPFAQGPQGLPVGLQVVGG-FRDD 400 >gi|326503942|dbj|BAK02757.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 555 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 137/507 (27%), Positives = 211/507 (41%), Gaps = 91/507 (17%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARA-AAEESDKRIINGDARD----L 71 +++V+LV Y+ I N + A IEV + Q ARA A E +G L Sbjct: 83 LTSVDLVRFYLDRIRGLNPLLRAVIEVNPDALRQAARADAERERRSSSSSGKCLTAFGPL 142 Query: 72 EGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-- 128 G+P+ +KD AT+ ++T A S L G ++ V ++L GAV+LGK NMDE+A Sbjct: 143 HGVPVLLKDNIATRDALNTTAGSLALLGSVVRRDAGVVRRLRRAGAVVLGKANMDEWANF 202 Query: 129 ---MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 G+ ++ G +P+ +P GSS G + A A + A ++GT+T GSI Sbjct: 203 RSLAGTDGWSARGGQARNPY-----VLSASPCGSSTGPAIAAAASMAAVTLGTETDGSIL 257 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS VGIKPT G SR G++ P D G I RTV D+ +L AI GYD+ D Sbjct: 258 CPASLNSVVGIKPTVGLTSRAGVVPITPRQDTVGPICRTVTDAVHVLDAIVGYDDLDGAA 317 Query: 246 VN-----LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAK 298 + +P Y + L + G +G+P + Y + T+ T +QQ + ++ GA Sbjct: 318 TSASSEYIPHGGYLQFLKTDGLNGKRIGVPNGF-FSYPNGTVQHTVYQQHLDTMRKQGAN 376 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIGFGQ 357 ++E L +E + IL+ N + I Sbjct: 377 VIE---------------------------------NLDIENLNVILDTLNNGQEIALAA 403 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-----VILTPTTPTS 412 E K L+S D Y R + +I + E+ +D + L T Sbjct: 404 EFK-------LSLNSYLSDLQYSPVRSLAEIIAFNNAHPVEEKMDEIGQIIFLVAENTTG 456 Query: 413 AFPLGKEENN------SGSMGHIY-----------NDVFTVAVNMAGLPAISVPAALCEK 455 + +E N S + + N + + + G+P I+VPA E Sbjct: 457 IGAIEREAINKLNKLSSDGLEKLMREHELDAIVAPNSAASPVLAIGGMPGITVPAGYGEM 516 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEK 482 +P GL G E L + E+ Sbjct: 517 GVPFGLSFGGLKGYEPRLIEMAYAFEQ 543 >gi|162147781|ref|YP_001602242.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] gi|161786358|emb|CAP55940.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] Length = 463 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 125/445 (28%), Positives = 202/445 (45%), Gaps = 65/445 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R +AV V + I AIE ++++N+ + +A A AE+ D+RI G D L G+ Sbjct: 28 IRQGRRNAVSFVTAAIAAIEVRDTRVNSVTRIFGPRAVAEAEKIDRRIAAGEDPGPLAGV 87 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P G+KD F +G T A S +L RP + +TV +L GA+ L LNMDEFA G + Sbjct: 88 PFGVKDLFDVEGEVTTAGSVVLREARPAVQDATVIARLRAAGAIPLASLNMDEFAYGFAT 147 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + ++YG I+ R+ + G S G ++A AGFL ++G+DT GSIR PAS G Sbjct: 148 DNAHYG--IT--RNPHDPARLAGGSSGGSAAAVAAGFLP-FTLGSDTNGSIRVPASLCGV 202 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPT+G R G FA SLD G T+ D ++ +A+ G P+P Sbjct: 203 WGLKPTFGTVPREGAYPFAASLDVVGPFAGTLADLRVVHEAMNGA----------PMPAL 252 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 D + + + + + I + + + LP A A Sbjct: 253 PVLSDLRVARLG---------GWFAENVSAPLAAAIDAVAGHLGHLPVVELPEVARARAA 303 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++I+ AE G+ + R+ R++ + + R++ G + ++ Sbjct: 304 SFLITAAEG--------GMLHLPRLR----------RRALQYDPATRDRLIAGALLPAAT 345 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---------GKEENNSG 424 +H RA R I F A DV++ P T A PL G+ + Sbjct: 346 VLQAHRFRA-WFREQIHAAFRTA-----DVLIAPATVGEA-PLIDQPTIVVDGQAVSARA 398 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVP 449 ++G ++T +++AG+P +SVP Sbjct: 399 NLG-----LYTQPLSLAGVPILSVP 418 >gi|291233418|ref|XP_002736650.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 944 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 118/421 (28%), Positives = 195/421 (46%), Gaps = 42/421 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G IKD + G+ + SHIL G+ P Y++TV ++ D G ++GK ++F++ Sbjct: 549 LAGKTFAIKDSISIAGVPLRFGSHILHGYTPDYDATVVTRILDAGGHIIGKSTTEDFSIS 608 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ TS GPV +P + + SS GS+ VA + ++GTD GGSIR PAS+ Sbjct: 609 GSSFTSSSGPVKNPHDASRAAGG-----SSSGSATLVAHGVVDMALGTDQGGSIRGPASW 663 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT+G GI + P++D G +T+ V D A+LL+ Sbjct: 664 CGIVGLKPTWGLVPYSGIFAMEPTVDHVGPMTKNVYDCALLLE----------------- 706 Query: 251 PDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-HTQ 308 L + + G+ VG+ E ++ ++ + L++ GA I ++S+P H Sbjct: 707 ------LTKDLSGIRVGMLAEGFQHPGGEYEVNNIVKSAAHRLQEVGATIEDVSVPMHIG 760 Query: 309 YALPAYYIISPAEASSNLA--RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 ++ ++ I ++ + G + +D L ++ +K + G Sbjct: 761 VSVVVHWEIVRRGIHHLVSGNSFIGTKGEYVTSLEDTLHNTFQSQKSQMSLNLKLMFITG 820 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--FP---LGKEEN 421 Y L S Y ++R I + + E E DV++ PT P +A P L +E Sbjct: 821 EY-LKSNYGQRFYAKSRNIARQLTAKYDEVLEN-YDVLVLPTRPKAAKKLPSKDLSVKEC 878 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S G N V T+ N+ G PAIS+ A +P+G+ ++G+ F E T+ V E Sbjct: 879 FDESAG---NGVNTLPFNVTGHPAISINAGFKADGLPVGMMIVGKHFDESTVLKVAYAFE 935 Query: 482 K 482 K Sbjct: 936 K 936 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 43/366 (11%) Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G ++GK + + + TS GPV +P+ + T GGSS GS+ V+ Sbjct: 126 GGCIIGKSTCENCCVSCGSCTSVNGPVTNPYDTTRMT-----GGSSTGSAVLVSVGAVDM 180 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 ++GTD GGSIR PAS G VG+KPT+G GI+S + D G +T+TV D A+LL+ Sbjct: 181 ALGTDQGGSIRSPASSCGIVGLKPTFGLVPYTGILSLESTFDNVGPMTKTVYDCALLLE- 239 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLK 293 L + + G+ +G+ KE + +D +Q Sbjct: 240 ----------------------LSRDLNGIKIGVVKEGFGTSSSDKDVDDIVRQAARQFT 277 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR----VEGKDILEMYEN 349 GA + EIS+P I A S +R G YG + D + Sbjct: 278 KTGASVDEISIPMHSVGGTIRRGILLQGAVSTFSR--GFNYGSKGFHPTSLFDSIHHSFK 335 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSH-YLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 +R VK ++ G Y+ +R Y Y + + + + + + + D ++ PT Sbjct: 336 SRPNDAPVRVKQNMLAGEYL--NRNYGGMIYAKCKNLAIELGKKYDASLND-YDALVMPT 392 Query: 409 TPTSAFPLGKEENNS--GSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIG 465 T P ++N S ++N+V + N+ G PAI++ +P+G+ ++G Sbjct: 393 L-TRQSPQFPQKNVSLKDLNTALHNNVSNLGGFNITGHPAITINTGNKVDGLPVGMMIVG 451 Query: 466 QPFREE 471 + F E Sbjct: 452 KHFDEN 457 >gi|330835108|ref|YP_004409836.1| amidase [Metallosphaera cuprina Ar-4] gi|329567247|gb|AEB95352.1| amidase [Metallosphaera cuprina Ar-4] Length = 388 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 130/453 (28%), Positives = 200/453 (44%), Gaps = 78/453 (17%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 ++E NS NA+I +K GD L G+ G+KD T+GI T A Sbjct: 3 MSLEKLNSVYNAFITTFEKKG-------------GDG-PLAGLTFGVKDVIETEGIKTTA 48 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 S IL P ++ + + + G +LGK N EFA+G++N +S GP +P R + Sbjct: 49 GSRILRNNVPKRDAWIVKAILSAGGTILGKTNTHEFAIGATNTSSLVGPARNP-RDKERI 107 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 GSSGGS+ AVA + +GTDTGGSIR PAS G +G KP+YG G+I F Sbjct: 108 SG----GSSGGSAVAVALNMVDVGVGTDTGGSIRIPASLCGVIGYKPSYGVFPTEGVIPF 163 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 + SLD G +TR + + +K I LP + L VG Sbjct: 164 SWSLDTIGFLTRDLETLWMTIKGI------------LPASKVKYFLQYVRSSPRVG---- 207 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 L T ++ + + + +K V + L T+Y II+ +E +S + Sbjct: 208 --LFMFDETTKDVLEKVLEFFPN--SKEVNLRL-MTKYGSQVRRIIAGSEGASYHTTWL- 261 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS--RCYDSHYLRARKIRTLI 389 K + +MY F +K VL S + Y+ + ++R LI Sbjct: 262 ---------KTMRDMY-------FPDVLK--------VLDSGQKTSAVDYINSLRMRKLI 297 Query: 390 KRDFTEAFEQGVDVILTPTT----PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 ++ F DVI++PTT P + LGKE + I T N+ G P+ Sbjct: 298 LEEYVRTFND-FDVIISPTTKITAPKISEVLGKEAEFRDGLVSI-----TELFNLVGAPS 351 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ISVP + + +P+G+ + G+PF + + + + Sbjct: 352 ISVP-IMERQGLPIGIMISGKPFSDGVVLGLAK 383 >gi|73538372|ref|YP_298739.1| putative amidase [Ralstonia eutropha JMP134] gi|72121709|gb|AAZ63895.1| Amidase [Ralstonia eutropha JMP134] Length = 468 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 123/468 (26%), Positives = 199/468 (42%), Gaps = 50/468 (10%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIG 77 +D+S VE +D+ + + + NA+ + A AR A S++R G L +G+P+ Sbjct: 24 RDLSPVETLDAILHRVAERDPACNAFRFIDADGAREQARASERRWRRGKPCGLLDGVPVS 83 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD +G T+ S + +L ++GAV+LGK N EF E++ Sbjct: 84 FKDLLHVRGWPTRLGSLATTDTPQPDDCPAAARLREHGAVLLGKTNTSEFGTKGITESAL 143 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW + TPGGSSGG++AA A L + TD GGSIR P++ G G K Sbjct: 144 AGITRNPWNT-----THTPGGSSGGAAAATALGLGPLHVATDGGGSIRAPSAACGVFGFK 198 Query: 198 PTYGRCSRLGIISFAP----SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 P GR + + P +L G + RTV D+A+LL AI+G D D + D+ Sbjct: 199 PGSGR-----VPCYPPAHSGTLFHVGPMARTVTDAALLLTAISGPDSRDWHALPYEDRDW 253 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 LD I G+ V + + P + + L GA + ++ P P Sbjct: 254 RTGLDDGIAGLRVAYSRTLGYLPVDPEVSALCDAAVRRLMALGAMVEDVD-PGFDNPAPT 312 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + ++ A GV LR D L + + + H + + Sbjct: 313 FRVLWDA----------GVARFLRDITPDRLALMD---------PLLHEAAARGRNVDAL 353 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 Y R R++ ++R F + D+++TPT SA P +G ++ Sbjct: 354 AYLDATERRRELGVAMRR-----FHERYDLLVTPTL-ASAPP---------RVGQPWSAP 398 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + N+ G PA SVP + +P+GLQ++G + + + E Sbjct: 399 HCLPFNLTGQPAASVPCGVTRAGLPIGLQIVGPSHADAMVLRAARAFE 446 >gi|62289541|ref|YP_221334.1| amidase [Brucella abortus bv. 1 str. 9-941] gi|82699470|ref|YP_414044.1| amidase [Brucella melitensis biovar Abortus 2308] gi|161511133|ref|NP_540277.2| amidase [Brucella melitensis bv. 1 str. 16M] gi|189023798|ref|YP_001934566.1| amidase [Brucella abortus S19] gi|237815038|ref|ZP_04594036.1| Indoleacetamide hydrolase [Brucella abortus str. 2308 A] gi|254696989|ref|ZP_05158817.1| amidase [Brucella abortus bv. 2 str. 86/8/59] gi|254729891|ref|ZP_05188469.1| amidase [Brucella abortus bv. 4 str. 292] gi|260545702|ref|ZP_05821443.1| amidase [Brucella abortus NCTC 8038] gi|260757562|ref|ZP_05869910.1| amidase [Brucella abortus bv. 4 str. 292] gi|260761387|ref|ZP_05873730.1| amidase [Brucella abortus bv. 2 str. 86/8/59] gi|62195673|gb|AAX73973.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615571|emb|CAJ10554.1| Amidase:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar Abortus 2308] gi|189019370|gb|ACD72092.1| Amidase [Brucella abortus S19] gi|237789875|gb|EEP64085.1| Indoleacetamide hydrolase [Brucella abortus str. 2308 A] gi|260097109|gb|EEW80984.1| amidase [Brucella abortus NCTC 8038] gi|260667880|gb|EEX54820.1| amidase [Brucella abortus bv. 4 str. 292] gi|260671819|gb|EEX58640.1| amidase [Brucella abortus bv. 2 str. 86/8/59] Length = 438 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 124/428 (28%), Positives = 186/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 46 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 105 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 106 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 160 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 161 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 218 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 219 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 267 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 268 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 318 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 319 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 354 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 355 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 412 Query: 475 SVGQIIEK 482 + IEK Sbjct: 413 AAALSIEK 420 >gi|301510142|ref|ZP_07235379.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter baumannii AB058] Length = 485 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 221/485 (45%), Gaps = 51/485 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 + + +S ELV Y +IE S +NA+I A A+ DK +++G L GI Sbjct: 28 IHERKVSCEELVHHYFDSIEKQQS-LNAFISTDKASAIQQAQYWDKYLLSGKPYPALMGI 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD G A + L F+P + + QKL D+GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVAGFPNSAGTPALADFKPQSSAPIIQKLIDHGAIIVGKTNMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ ++D GGSS GS++AVA + +IGTDTG SIR P++ G Sbjct: 147 NTAIHIEGVVGTRNAVDPL--HIAGGSSSGSASAVAAGMVPIAIGTDTGASIRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG +PT GR S+ I + + D AG I TV D ++ + I P Sbjct: 205 CVGFRPTVGRYSQDSITPISHTRDTAGPIAHTVSDIILIDELITQE------------PK 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 E I+ +GI Y ++L + + + LK+AG +I+ + +P+ + Sbjct: 253 KEPLQPHQIR---LGI-NTYFWNHLDEDVREQAHIALELLKEAGVEIINVDMPNLEQL-- 306 Query: 313 AYYIISPAEASSNLARYDGVRY------GLRVEGKDILEMYENTRSIGFGQEVKHRIM-- 364 + I P +YD ++Y L +E + ++I F Q + +++ Sbjct: 307 NHAISFPVVVYE--GKYDLIQYLKDHHVNLTIENVVDQISSPDVQAI-FKQNILPQLIQD 363 Query: 365 -IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 G V Y+ AR + ++ EA + +L PT+P A PL E+ NS Sbjct: 364 QTGQLVPVLPFYEKAISEARPQLLELYQNTFEA--HNLHALLFPTSPIVA-PLANEQVNS 420 Query: 424 GSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSVG 477 + T+ N GLP +S+P K K+P+GL++ G P + + ++G Sbjct: 421 ------IENFQTLIRNTDPGSNIGLPGLSLPIGKGAKSKLPVGLEIDGLPHHDSEILAIG 474 Query: 478 QIIEK 482 + +E+ Sbjct: 475 ETLEE 479 >gi|260432330|ref|ZP_05786301.1| amidase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416158|gb|EEX09417.1| amidase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 442 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 135/468 (28%), Positives = 209/468 (44%), Gaps = 57/468 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIK 79 I EL + Y+ AI+ + Y V +ARA A + +R G R L +G+PI K Sbjct: 21 IDPEELTEVYLAAIDAHPHRDRIYARVTHDRARAEARAAKERAAQGLRRSLLDGVPISWK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSY 137 D F T G+ T+A S +L G P +++TV + GAV LGK +M E A N + Sbjct: 81 DLFDTAGVGTEAGSALLRGRVPDHDATVLRNATAMGAVCLGKTHMSELAFSGLGLNPVTA 140 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 P ++ +K PGGSS G++A+VA L A IG+DTGGS+R PA++ VG+K Sbjct: 141 TPPCVN-------DEKAVPGGSSSGAAASVAFGLAACGIGSDTGGSVRIPAAWNDLVGLK 193 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 T GR S G++ D G +TR+V D+A +L + G + D Sbjct: 194 TTSGRLSLEGVVPLCLRFDTVGPLTRSVEDAAQMLALLEGGTQADLR------------- 240 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 S++G + D L + + + + L+DAGA+IV + +P A+ ++ Sbjct: 241 GASLKGRRFADLQTIAQDDLRDAPRQAYAEALDRLRDAGAEIVPLEVPELAEAMGLSGVL 300 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 EA YGL +D++E E+ R G S Y + Sbjct: 301 YTTEA-----------YGLW---RDVIEANPEA----MYPEILERFRAGKGH-SGPDYVA 341 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--- 434 + R + R+ +A G D +L PT P L + N+ ++ ++ Sbjct: 342 AWSRLKACRS-----AWDAATAGFDAVLAPTAPILPPDLDRLMNDHDY--YVTENLLALR 394 Query: 435 -TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T N+ GL A+S+P + GL ++G P EE L +G E Sbjct: 395 NTRIGNLMGLAALSLPTSTPS----CGLMMLGYPGSEEALLRLGAAAE 438 >gi|56461071|ref|YP_156352.1| amidase [Idiomarina loihiensis L2TR] gi|56180081|gb|AAV82803.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Idiomarina loihiensis L2TR] Length = 518 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 135/506 (26%), Positives = 236/506 (46%), Gaps = 50/506 (9%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQ------MNAYIEVVAQKARAAAEESDK 61 +V E ++ + + D++A +L Y+Q I N Q +N+ E + AR E ++ Sbjct: 32 SVIELQNTMTNGDLNAEQLTQYYLQRINTHNRQGANLRAVNSVNENALKDARRLDAEREQ 91 Query: 62 RIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L GIP+ +KD T G+ S + P ++ + ++L D GA++LG Sbjct: 92 GKVRGP---LHGIPVLLKDNIDTADGMANTGGSLLFAENYPEDDAFLVEQLRDAGAIILG 148 Query: 121 KLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 K N+ E+A SS ++ G ++P+ + ST GSS GS+ AVA L A + Sbjct: 149 KANLSEWANFRSTRSSSGWSAIGGQAVNPYDTTRST-----CGSSAGSATAVAADLVALA 203 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GS+ PA+ G V IKPT G SR GII A S D AG + R+V +A++L A+ Sbjct: 204 VGTETDGSLTCPAAVNGIVTIKPTLGLISRDGIIPIAHSQDTAGPMARSVAGAALMLDAM 263 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 YD D ++G +G+ + L + +D+ ++Q +S ++ Sbjct: 264 QAYDPDDPAGYRTETNFASHLKADGLEGKRIGVVR--NLMGYNNLLDEQFEQQLSIMEAQ 321 Query: 296 GAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL----EMYENT 350 GA+I+ + + + +Y + ++ E ++A Y D++ E+ E Sbjct: 322 GAEIINVEMTTYGEYGGDEFTVLL-YEFQQDMAAYLSSTNLPYNNLSDMIAANNELPEQE 380 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAF--EQGVDVILTP 407 S+ FGQE+ + ++ ++ Y +A K + L ++ +A E +D+++ P Sbjct: 381 LSL-FGQELFE-------MAEAQDDEAAYQKALAKSKKLAGKEGIDAMLEENNIDLLIAP 432 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKMPLGLQL 463 TT P K ++ +G Y+ + +AG P ISVP E +P+G+ Sbjct: 433 TTS----PAWKIDH---VLGDNYSGSASSPAAVAGYPHISVPMGYIQIGDEPALPVGISF 485 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 G E TL E+ + +P Sbjct: 486 FGAARSEATLIEAAFAYEQATKHRKP 511 >gi|241258726|ref|YP_002978610.1| allophanate hydrolase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863196|gb|ACS60859.1| allophanate hydrolase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 601 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 130/479 (27%), Positives = 211/479 (44%), Gaps = 61/479 (12%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKA-----------------RAAAEESDKRIINGDAR 69 + S A ++ + ++A EV+A++A RAAA+ R ++ Sbjct: 8 LSSLRAAYQSGLTPLDAIEEVIARRAASKDPAIFITPVPDDELRAAAKVLMARAPEANSL 67 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P +KD G+ T A + +RP ++TV +L GA+++GK N+D+FA Sbjct: 68 PLWGVPFAVKDNIDAAGLPTTAACPAYE-YRPEADATVVARLKAAGAIIIGKTNLDQFAT 126 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + S YG +P D+ + GGSS GSS VA L A ++GTDT GS R PA+ Sbjct: 127 GLNGTRSPYG---APRSVFDAA--YISGGSSSGSSVTVASGLAAFALGTDTAGSGRVPAA 181 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F VGIKPT G G + S+D I TV D + K G+D DA Sbjct: 182 FNNLVGIKPTPGLVPNTGAVPACKSVDCITIFAATVGDGVAIRKVAEGFDGADAFS---- 237 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + + + G+ +G+ + ++ ++ + Q I K GA IV + Sbjct: 238 --RHAKPANLPVSGLRIGVLTDAEREFFGDKEVEALYDQAIERAKALGATIVPFDYAPFR 295 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 EA++ L YDG R+ +E + T + F V+ I Sbjct: 296 ------------EAAALL--YDGPWVAERLAA---VETFLATNAADFDPTVRGIIEGAKG 338 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS---AFPLGKEENNSGS 425 + ++ Y ++ L ++ TEA + DV+L PT PT+ A L +G Sbjct: 339 KTAVEAFNGRY----RLEELRRK--TEAEWEKADVLLLPTAPTTYTVADMLANPVVLNGR 392 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 +G +T VN+ AI+VPA + +P G+ +I F ++ L + + + A Sbjct: 393 LGR-----YTNFVNLLDCAAIAVPAGFGKDGLPGGVTVIAPAFTDDALAPLADALHRAA 446 >gi|229579162|ref|YP_002837560.1| Amidase [Sulfolobus islandicus Y.G.57.14] gi|229582083|ref|YP_002840482.1| Amidase [Sulfolobus islandicus Y.N.15.51] gi|228009876|gb|ACP45638.1| Amidase [Sulfolobus islandicus Y.G.57.14] gi|228012799|gb|ACP48560.1| Amidase [Sulfolobus islandicus Y.N.15.51] Length = 397 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 138/467 (29%), Positives = 202/467 (43%), Gaps = 89/467 (19%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 +E NS+ NA+I + EE+DK G +D + GIKD TKGI T A S Sbjct: 3 LEELNSKYNAFITL------HNIEENDK----GKLKD---VTFGIKDVILTKGIRTTAGS 49 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 IL+ + P + V + G ++GK N EFA+G++N +S GP +P + Sbjct: 50 RILENYVPQKNAYVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVNP-----E 104 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSSGGS+ AV + IGTDTGGS+R P+S G +G KPT G G+I F+ Sbjct: 105 RISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSW 164 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLD GII V+D+ LL+ + DA N + V I K Sbjct: 165 SLDTVGII---VKDNIGLLRRV-----FDAILPN--------------EKKKVEIAKLRT 202 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAK------IVEISLPHT-QYALPAYYIISPAEASS-- 324 L + + LK+ AK IVE+ LP QY IS AEASS Sbjct: 203 RPRLGLFLFDEMEVSRILLKEIYAKLSSYFDIVEVDLPLLRQYGSKTRRTISLAEASSYH 262 Query: 325 ------NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 N +Y Y L ++G I + Sbjct: 263 KDWITENSNKYFKDTYTLLLDGMKI-------------------------------SATD 291 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 Y+ A + R ++ ++ + F + +D IL+PTT A + +N Y T Sbjct: 292 YIDAIRYRRVLIEEYIKVF-KNIDFILSPTTKIVAPKISDVLSNPLQFRE-YLIANTELF 349 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ G P+IS+P + ++P+GL + G+ +++ L V + I G Sbjct: 350 NVVGAPSISIPFSTLN-ELPVGLMISGELYKDGDLLEVTEYILNVVG 395 >gi|294664614|ref|ZP_06729953.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605615|gb|EFF48927.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 554 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 147/485 (30%), Positives = 224/485 (46%), Gaps = 33/485 (6%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 R+ S S+++L +Y+Q +I+ + ++NA IE+ Q A A A D G R Sbjct: 52 RMASGQSSSLQLTRAYLQRIASIDRAGPRLNAVIELNPQ-AEADARALDAERKAGHVRGP 110 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + A S L FRP ++ V Q+L GAV+LGK N+ E+A Sbjct: 111 LHGIPVLLKDNIDALPMVNSAGSLALAEFRPDRDAFVVQRLRAAGAVILGKTNLSEWANF 170 Query: 131 SSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S ++S R+ + D+ P GSS G+ AA+A L IGT+T GSI PAS Sbjct: 171 RSTQSSSGWSGRGGLTRNPYALDR-NPCGSSAGTGAAIAASLATVGIGTETDGSITCPAS 229 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--ATCVN 247 G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA D D Sbjct: 230 VNGLVGLKPTVGLVSRDGIIPISTSQDTAGPMTRSVADAAAVLQAIAAPDPQDPATAKAP 289 Query: 248 LPVPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 DY L S++G +G+ + R D P I + + L+ AGA +VE +L Sbjct: 290 AASADYLAHLKPDSLRGARLGLLRNPLRED---PAIAAALDRAVQTLRAAGATVVETALV 346 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN--TRSIG-FGQEVKHR 362 A ++ E + L Y + + ++ N R + FGQE+ + Sbjct: 347 TDGKWDAAEQMVLLVEFKAGLNAYLQNHHAPVSTLQQLIAFNRNHAQREMPYFGQELFEQ 406 Query: 363 IMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQG--VDVILTPTTPTSAFPLGKE 419 + D+ YL AR + L + +A + +D ++ PTT G Sbjct: 407 AQAAPGL-----DDAGYLSARANAKRLAGPEGIDAALKADRLDALIVPTT-------GAA 454 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + G + A +AG P++SVP + +PLGL +G + E L + Sbjct: 455 WTTTLGKGDSFPGAGYGAAAVAGYPSLSVPMGQAQ-GLPLGLLFMGTAWSEPRLIELAYA 513 Query: 480 IEKEA 484 E+ + Sbjct: 514 YEQRS 518 >gi|224033405|gb|ACN35778.1| unknown [Zea mays] Length = 458 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 127/472 (26%), Positives = 214/472 (45%), Gaps = 52/472 (11%) Query: 30 YIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATK 85 ++ A+E + M +I AE+S +R G ++G+ + +KD Sbjct: 6 FLAAVEECSGPDLNMGFFISCDPADVLRQAEDSTRRYQQGAPLSAMDGVLVAVKDELDCL 65 Query: 86 GIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 T + L R ++ +L GAVM GK NM E G+S ++G +P Sbjct: 66 PYPTSGGTRWLGSARRCAADAACVAQLRACGAVMAGKANMHELGAGTSGINPHHGATRNP 125 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + + + + G S G ++A AG LC ++G D GGS+R PA+ G VG KPT GR S Sbjct: 126 Y----NVGRVSGGSSGGSAAAVCAG-LCPVALGADGGGSVRMPAALCGVVGFKPTAGRLS 180 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 G++ ++ GI+ TV D+ I AIA + P P + L+ + Sbjct: 181 NSGLLPLNWTVGMPGILAATVEDTLIAYAAIADQSK--------PSPLQQPELNLPMLTR 232 Query: 265 TVGIPKEYRLDYL------SPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYII 317 T +P Y S I + + L+ G + V++++P + A+Y+ Sbjct: 233 TRSMPSIRLAKYAKWFDDSSEDIRSLCGKALQMLRTHYGWESVDVTVPEIEEMRLAHYVT 292 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY-VLSSRCYD 376 +E +++LA +Y ++ D E+ G +V RI + Y SSR Sbjct: 293 MGSECTASLA----AKY---LDSMDRSEV---------GWDV--RIALSAYGSFSSR--- 331 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV--- 433 YL A+++R + F E + D I+TP T +A+ L + ++G + +I Sbjct: 332 -DYLSAQRLRCR-QMYFHEKIFETADAIVTPMTGVTAYALQDDALSTGELDYINGAALVR 389 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +++A N GLPAI+VP +P+GLQ IG+P+ E TL + +++ G Sbjct: 390 YSIAGNFLGLPAITVPVGYDRGGLPVGLQFIGRPWSEATLLHLAYAMQEACG 441 >gi|332875470|ref|ZP_08443292.1| Amidase [Acinetobacter baumannii 6014059] gi|332736329|gb|EGJ67334.1| Amidase [Acinetobacter baumannii 6014059] Length = 345 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 26/298 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 + + +S ELV Y IE + +NA+I A A+ DK +++G L GI Sbjct: 28 IHERKVSCEELVHHYFDTIEKQQA-LNAFISTDKASAIQQAQYWDKYLLSGKPCPALMGI 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD G A + L F+P + V QKL D GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVAGFPNSAGTPALAHFKPQTSAPVIQKLIDQGAIIVGKANMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ +++ GGSS GS+ AVA + ++GTDTG SIR P++ G Sbjct: 147 NTAMHIEGVVGTRNAVNPLH--IAGGSSSGSAVAVAVGMVPIAMGTDTGASIRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG +PT GR S+ GI + + D AG I TV D ++ + I Sbjct: 205 CVGFRPTVGRYSQEGITPISHTRDTAGPIAHTVSDVILIDELIT---------------- 248 Query: 253 YERALDQSIQG--MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + +S+Q + +GI Y ++L + + + LK AG +I+ + +P+ + Sbjct: 249 -QEPRKESLQSHQIRLGI-NSYFWNHLDEDVHEQAHIALELLKSAGVEIIPVDMPNLE 304 >gi|15982789|gb|AAL09742.1| AT5g64440/T12B11_3 [Arabidopsis thaliana] gi|23505899|gb|AAN28809.1| At5g64440/T12B11_3 [Arabidopsis thaliana] Length = 357 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 101/369 (27%), Positives = 174/369 (47%), Gaps = 36/369 (9%) Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E MG++ S YG +P ++T GGSS GS+A VA LC+A++GTD GGS Sbjct: 1 MHELGMGTTGNNSNYGTTRNP----HDPKRYT-GGSSSGSAAIVAAGLCSAALGTDGGGS 55 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R P++ G G+K TYGR G + +++ G + ++ D+ ++ AI G D Sbjct: 56 VRIPSALCGITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADR 115 Query: 244 TCVNLPVPDYERALDQ----SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAK 298 + P + + L +I + +G ++ D S I + + L + G K Sbjct: 116 YNLKPSPPCFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCK 175 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VEI +P + A+ I + S+L Y E ++ +TR+ Sbjct: 176 VVEIVVPELEEMRAAHVISIGSPTLSSLTPY--------CEAGKNSKLSYDTRT------ 221 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ + S Y+ A+ +R + F+ VDVI+TPTT +A + Sbjct: 222 --------SFAIFRSFSASDYIAAQCLRRRLMEYHLNIFKD-VDVIVTPTTGMTAPVIPP 272 Query: 419 EENNSGSMG-HIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + +G + D+ F +A N+ G PAISVP ++ +P+GLQ++G+P+ E T+ Sbjct: 273 DALKNGETNIQVTTDLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRPWAEATVLG 332 Query: 476 VGQIIEKEA 484 + +E+ A Sbjct: 333 LAAAVEELA 341 >gi|146279872|ref|YP_001170030.1| 2-alkenal reductase [Rhodobacter sphaeroides ATCC 17025] gi|145558113|gb|ABP72725.1| 2-alkenal reductase [Rhodobacter sphaeroides ATCC 17025] Length = 454 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 127/472 (26%), Positives = 207/472 (43%), Gaps = 67/472 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + ++ RDRL S + AVELV++ + I + A+ + A A A D R Sbjct: 10 LLALPATQLRDRLASGALRAVELVEACLARIAAREPDVRAWAFLDGAHALAQARALDARR 69 Query: 64 INGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 ++G L G+P+G+KD +G+ T G ++ V +L GA+++GK Sbjct: 70 LSGAPIGPLHGLPVGVKDVIDVRGMPTGHGLADRAGRVAQTDAFVAARLRAAGAILIGKT 129 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTG 181 E A + P + + D TPGGSS GS+AAVA + +IGT TG Sbjct: 130 ATAEAAF------------LEPPATRNPHDPARTPGGSSSGSAAAVAAGMVPLAIGTQTG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+ +PA+F G G KP++G R G++S +PSLD G+ R+V D A+L +A+AG+D Sbjct: 178 GSVIRPAAFCGITGFKPSFGLIPRTGVLSQSPSLDTMGVFGRSVEDVALLAEALAGHDPA 237 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-------- 293 D +P P + P L ++ P W+ ++ Sbjct: 238 DPASEPMPTPRLP-------ETAASAPPVAPTLAFVRP---PGWEAASENMRLALEELAS 287 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G + + LP P++ A+++L R R+ ++ Y + + Sbjct: 288 LLGRDCIALDLP------PSF------GAAADLRR--------RINLAEMAHHYADLEA- 326 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Q ++ + YLRA + R+ + F + D IL P P A Sbjct: 327 ---QAPLSPLLREALAEGRAIPATDYLRALEARSDLLAGLAPIFHR-CDAILCPAAPGPA 382 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 G+E I+N ++T + GLPAI++P + +P+G QL+G Sbjct: 383 P--GRETTGDA----IFNGLWT----LCGLPAITLPLFASSEGLPMGAQLVG 424 >gi|169795884|ref|YP_001713677.1| putative amidase [Acinetobacter baumannii AYE] gi|213157420|ref|YP_002319465.1| indoleacetamide hydrolase [Acinetobacter baumannii AB0057] gi|215483372|ref|YP_002325583.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter baumannii AB307-0294] gi|301347890|ref|ZP_07228631.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter baumannii AB056] gi|301595141|ref|ZP_07240149.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter baumannii AB059] gi|332856102|ref|ZP_08436131.1| indole acetimide hydrolase [Acinetobacter baumannii 6013150] gi|332868475|ref|ZP_08438187.1| indole acetimide hydrolase [Acinetobacter baumannii 6013113] gi|169148811|emb|CAM86680.1| putative amidase [Acinetobacter baumannii AYE] gi|213056580|gb|ACJ41482.1| indoleacetamide hydrolase [Acinetobacter baumannii AB0057] gi|213987762|gb|ACJ58061.1| Indoleacetamide hydrolase(IAH) (Indole-3-acetamidehydrolase) [Acinetobacter baumannii AB307-0294] gi|332727164|gb|EGJ58621.1| indole acetimide hydrolase [Acinetobacter baumannii 6013150] gi|332733362|gb|EGJ64549.1| indole acetimide hydrolase [Acinetobacter baumannii 6013113] Length = 486 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 221/485 (45%), Gaps = 51/485 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 + + +S ELV Y +IE S +NA+I A A+ DK +++G L GI Sbjct: 28 IHERKVSCEELVHHYFDSIEKQQS-LNAFISTDKASAIQQAQYWDKYLLSGKPYPALMGI 86 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 I +KD G A + L F+P + + QKL D+GA+++GK NM E A G + Sbjct: 87 LIAVKDNIHVAGFPNSAGTPALADFKPQSSAPIIQKLIDHGAIIVGKTNMHELAFGVTGY 146 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + V+ ++D GGSS GS++AVA + +IGTDTG SIR P++ G Sbjct: 147 NTAIHIEGVVGTRNAVDPL--HIAGGSSSGSASAVAAGMVPIAIGTDTGASIRLPSALNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG +PT GR S+ I + + D AG I TV D ++ + I P Sbjct: 205 CVGFRPTVGRYSQDSITPISHTRDTAGPIAHTVSDIILIDELITQE------------PK 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 E I+ +GI Y ++L + + + LK+AG +I+ + +P+ + Sbjct: 253 KEPLQPHQIR---LGI-NTYFWNHLDEDVREQAHIALELLKEAGVEIINVDMPNLEQL-- 306 Query: 313 AYYIISPAEASSNLARYDGVRY------GLRVEGKDILEMYENTRSIGFGQEVKHRIM-- 364 + I P +YD ++Y L +E + ++I F Q + +++ Sbjct: 307 NHAISFPVVVYE--GKYDLIQYLKDHHVNLTIENVVDQISSPDVQAI-FKQNILPQLIQD 363 Query: 365 -IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 G V Y+ AR + ++ EA + +L PT+P A PL E+ NS Sbjct: 364 QTGQLVPVLPFYEKAISEARPQLLELYQNTFEA--HNLHALLFPTSPIVA-PLANEQVNS 420 Query: 424 GSMGHIYNDVFTVAVNM-----AGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSVG 477 + T+ N GLP +S+P K K+P+GL++ G P + + ++G Sbjct: 421 ------IENFQTLIRNTDPGSNIGLPGLSLPIGKGAKSKLPVGLEIDGLPHHDSEILAIG 474 Query: 478 QIIEK 482 + +E+ Sbjct: 475 ETLEE 479 >gi|187479822|ref|YP_787847.1| amidase [Bordetella avium 197N] gi|115424409|emb|CAJ50962.1| putative amidase [Bordetella avium 197N] Length = 429 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 128/476 (26%), Positives = 214/476 (44%), Gaps = 62/476 (13%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN + E+ RL+ +++SAV++ + + IE + A+ + + A A+ D Sbjct: 5 LNELGALEAVKRLQRRELSAVQMARACLARIEQREPAVRAWTALDPAQVIAQAQALDAAS 64 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + G L G+P+G+KD F T + T S I +P ++ V + GA++LGK Sbjct: 65 LRGV---LHGLPLGVKDIFDTHDLPTCYGSGIYSTHQPDSDAAVVALCREAGALVLGKTV 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA T GP +P + +TPGGSS GS+AAVA + +IG+ T GS Sbjct: 122 TTEFA------TYQPGPTRNPCNT-----SYTPGGSSSGSAAAVADAMVPLAIGSQTAGS 170 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 + +PA++ G VG KPT+GR SR G+ + SLD G R+V D A+L+ + G D Sbjct: 171 VIRPAAYCGVVGYKPTFGRVSRAGMKLLSESLDTVGGFARSVEDMALLVSVLMG----DK 226 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 LP R +G+ + ++ + + ++ L AGA + +I Sbjct: 227 RLRELPEVSLPR----------IGMLRTFQWRHAQAETREAYEDAARRLSRAGAVVEDIE 276 Query: 304 LPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LP +L + + EA+ LA +E TR Q++ R Sbjct: 277 LPVQDCSLVQLHADVMAFEAAQGLA-------------------FERTRC---RQQLGTR 314 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 ++ ++ + H L + + F+Q DV+L P+T A L E Sbjct: 315 LLALLDAGAAIRAEDHQ-ERLTRAALARARALQWFDQ-YDVLLVPSTTGEAPFL---EQG 369 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +G + +F + G PA+ +P + + +P+GLQ++G P + L S + Sbjct: 370 TG------DPLFCRVWTLLGFPAVHLPFSSGPQGLPVGLQVLGPPHADYKLLSTAR 419 >gi|90423180|ref|YP_531550.1| amidase [Rhodopseudomonas palustris BisB18] gi|90105194|gb|ABD87231.1| Amidase [Rhodopseudomonas palustris BisB18] Length = 482 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 122/480 (25%), Positives = 205/480 (42%), Gaps = 43/480 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D+L + +++ ++L+D+ I + +NA ++AR A+ +R G+ L G Sbjct: 16 DKLNAGEVTPLQLLDALEARIAAVDGAVNALPTRCFERARRHADALMQRP-RGERGLLAG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD +G+ + S I P + + L NGAV+ K N EF G++ Sbjct: 75 LPLPIKDLSDVEGVLSTQGSKIFKDHIPARSDLMVEHLEANGAVIYAKSNTPEFGAGANT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +PW + G S G + A G A GTD GGS+R PASF G Sbjct: 135 FNELFGATRNPW----DLSRSAAGSSGGAAVALATGTAWLAQ-GTDMGGSLRNPASFCGV 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG++P+ GR + +L AG + R V D A+LL A++G + D + P + Sbjct: 190 VGMRPSIGRVAHTPAAKIDRTLGVAGPMARNVEDLALLLDAMSGEQQADPLSLPSPRDSF 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 RA V + + + P + ++ DAG VE++ P + A Sbjct: 250 RRAARYGAPPKRVAYSPDLGITPVDPEVAAITRKAALRFADAGVA-VELAHPDLREAHEC 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + ++ + + + A L E +D L+ EV I G + Sbjct: 309 FQVLRAFDFAISKAT-------LLRECRDQLK-----------PEVVWNIEQGLKLTVDD 350 Query: 374 CYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--SGSMGHIY 430 + R A RTL F Q D++LTP T + +P+ EN + GH + Sbjct: 351 LARAEAQRVAMTARTL-------EFFQTYDLLLTPATIVAPYPI---ENRYVAECDGHSF 400 Query: 431 ND-----VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ A+ + PA+S+P +P+GLQ++ P E L + +++E G Sbjct: 401 DNYVEWLAIVYAITLVCCPALSLPCGFTATGLPVGLQIVAPPRGEARLLAGARVLEDILG 460 >gi|162451448|ref|YP_001613815.1| putative amidase [Sorangium cellulosum 'So ce 56'] gi|161162030|emb|CAN93335.1| putative amidase [Sorangium cellulosum 'So ce 56'] Length = 463 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 125/491 (25%), Positives = 209/491 (42%), Gaps = 66/491 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +R + +SA ++V++ IE N +NA + + ++ARA A +D + G+A L G+ Sbjct: 19 IRQRSLSAADVVEACYARIERLNGAVNAIVTLDKERARARARAADLALARGEAVGPLHGV 78 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD T G+ T A L F P ++ ++ + GA+++GK N Sbjct: 79 PVTVKDALHTAGLRTTAGHERLRDFVPERDAAAIDRIQEAGAIVIGKTNCSTLCGDLQTS 138 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW + T GGSSGG +AAVA L A IGTDTGGSIR PAS+ G Sbjct: 139 NPIFGTTNNPWENTR-----TSGGSSGGEAAAVALGLSALGIGTDTGGSIRVPASYCGVY 193 Query: 195 GIKPTYGRCSRLG---IISFAP----SLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 G KP+ + G + AP L G I R+VRD + ++G + C A + Sbjct: 194 GFKPSLRKVPSDGPAFPLDAAPRREDHLTVIGPIARSVRDLMLCYDVLSG-ESCSA-ATS 251 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P P V E+ + + ++ L+ + A++ +++ P Sbjct: 252 APPP-------------RVAWTHEFAFP-MDDAVTAELERAFDALRGSAAQVEKVASPFD 297 Query: 308 QYALP-AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + +Y++++ E + D Y L M+E RS G Sbjct: 298 LWKTNLSYFMLNMYEFKTK--ETDAAFYRL-------FWMFEWMRSAFRGG--------- 339 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE------ 420 D Y R + + + F E+F + D + P TP+ A K Sbjct: 340 --------LDGSYARLKAEQRELSGRF-ESFIEAYDCWVVPATPSVAIRHQKTGRSVPMT 390 Query: 421 -NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N +N V F VN+ G P++ +P + +P+G+Q++G+ ++ +L Sbjct: 391 VNGKEKKVEYWNAVGGFAFFVNLLGNPSVVIPVGRSKDGLPVGVQVVGKHGQDASLLRAA 450 Query: 478 QIIEKEAGYFR 488 + I G R Sbjct: 451 RFIADTIGQLR 461 >gi|239995212|ref|ZP_04715736.1| amidase [Alteromonas macleodii ATCC 27126] Length = 539 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 131/504 (25%), Positives = 238/504 (47%), Gaps = 64/504 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 + S D ++ ELV Y+ IE + ++N+ + + A A+ DK++ NG+ L GI Sbjct: 42 IASGDTTSAELVSGYLARIERLDEKVNSVL-ALNPNALTEAKAIDKQLANGETLGPLAGI 100 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD + + T A S L ++ + +KL GA++LGK N+ E+A S Sbjct: 101 PVLLKDNIESAEMPTTAGSMALITNDTGRDAPIVEKLKAAGAIILGKTNLSEWANFRSES 160 Query: 135 TSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + IS W ++ + + GSS GS AA++ L + ++GT+T GSI PA Sbjct: 161 S------ISGWSAVGGLTRNPHMLSRSACGSSSGSGAAMSLRLASLAVGTETNGSIICPA 214 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 S G VG KPT G SR I+ + S D AG +T V+D+ ++ +AG D D ++ Sbjct: 215 SINGVVGFKPTVGLLSRTHIVPISFSQDTAGPMTSNVQDAWLMTAIMAGPDASDNATLDA 274 Query: 249 ----PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS- 303 P L ++G +G+ + + D +P + +++ ++ LK +GA +V+IS Sbjct: 275 ESHRPSMPTSSMLATDLKGKRIGVVRYRQGD--NPHVLAVYEKALNQLKASGATLVDISD 332 Query: 304 ---------------LPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMY 347 L +++ Y SPAE + NL+ + + + E + L Sbjct: 333 FSQPDSFWADSYNVLLSEFHHSINEYLSGSPAELPARNLSEL--IDFNNKTERELAL--- 387 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--EQGVDVIL 405 F Q++ + + + S + ++ R I+ ++ + + VDV++ Sbjct: 388 -------FNQDIFEKSLASAAIDSEKYQNA----LRLIQDTAGKNGIDTLLAKHNVDVLV 436 Query: 406 TPTTPTSAFPLGKEENNS--GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 P+ S G ++S G +G Y +AG P ++VPA K +P+G+ Sbjct: 437 APSNSPSFLIDGVYGDHSPVGFIGIGY------LAAIAGYPHLTVPAGQV-KDLPVGISF 489 Query: 464 IGQPFREETLFSVGQIIEKEAGYF 487 IG +++E++ +G++ E + G+F Sbjct: 490 IGGKWQDESVLKIGRVFEAKHGFF 513 >gi|153008624|ref|YP_001369839.1| amidase [Ochrobactrum anthropi ATCC 49188] gi|151560512|gb|ABS14010.1| Amidase [Ochrobactrum anthropi ATCC 49188] Length = 461 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 131/487 (26%), Positives = 216/487 (44%), Gaps = 42/487 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA AR +A+ S+ Sbjct: 1 MSNLADLSAVELVSAYKTKSLSPVEVTEAVITRIEAYEPKLNALWAYDPDAARVSAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ AT+G L ++ + + G V+L Sbjct: 61 ARWSKGEPAGPIDGVPLTIKENIATEGTAVPLGCAALPLKPAVADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDL-----NTNPGGSSAGAGSAGAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKAIAG 237 GGSIR PA + G VG+KP++GR I P+ AG +TRTV DSA+ + ++ Sbjct: 176 IGGSIRLPAGWCGLVGLKPSFGR------IPIDPAFLGRVAGPMTRTVADSALYMSVLSR 229 Query: 238 YDECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D ++LP D + L ++G+ +G+ +L + + +A Sbjct: 230 PDRRDG--MSLPPQDIDWMNLGIDVKGLKIGL-------WLDAGFGEEVGEETKAAVEAS 280 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGF 355 AK+ A II P N DG+ R+ DI +M R+ Sbjct: 281 AKLFA----------DAGAIIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENRA--- 327 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 ++ I T + YL ++ + R+ A +G D I++PT+P + +P Sbjct: 328 --KILPYIYQWTETAEGLSGEEVYLGFAQMDAM--RNAALAASKGFDFIISPTSPMATYP 383 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + FTVA+NM+ PAIS+ +P+GLQ+ GQ F + + Sbjct: 384 AEWASPVNDPQRPFEHIAFTVAMNMSEQPAISINCGYTSTGLPIGLQIFGQRFDDLGVLR 443 Query: 476 VGQIIEK 482 + + E+ Sbjct: 444 LAKAYEE 450 >gi|119387776|ref|YP_918810.1| amidase [Paracoccus denitrificans PD1222] gi|119378351|gb|ABL73114.1| Amidase [Paracoccus denitrificans PD1222] Length = 458 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 137/503 (27%), Positives = 219/503 (43%), Gaps = 64/503 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + ++ E D +R + +S VE ++ ++ IE + S +NA++ V A ARA A+ ++ Sbjct: 1 MTAIADLSAVELADAIRRRAVSPVEATEAALERIE-ARSDLNAFVTVAAGAARAEAQAAE 59 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ GDA L G+P +KD AT G+ T S + P ++ + G +M+ Sbjct: 60 AAVMRGDALGPLHGVPYSVKDLLATAGVRTTMGSRLFADNVPAEDAVSVARARVAGGIMI 119 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF + + G ++P +D T G SS GS+ AVA + SIGTD Sbjct: 120 GKTTTPEFGHAQTASSPLTGLTLNP---IDP--GVTAGASSSGSAVAVAAGMGPLSIGTD 174 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PA+ G VG+KPT G L + + AG + RTV D+A+ +A+A D Sbjct: 175 GGGSIRIPAACCGIVGMKPTLGVIPHLALPDLFAANSFAGPMARTVADAALFFEAMASPD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG--ISWLKDAGA 297 D Y +A Q L P D +G I W+ AGA Sbjct: 235 PRD---------PYGQAAVQ-----------------LHPD-DGCGLRGLRIGWIPTAGA 267 Query: 298 KIVEISLPHTQYAL----PAYYIISPAEASSNLARYDGV-----RYGLRVEGKDILEMYE 348 ++ + TQ AL I+ EA + ++ V R GL E Sbjct: 268 RVERETAEITQAALRRIEAEGAIVE--EADLDFKSFEPVFLTLLRVGLAARAAPAFAGRE 325 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP- 407 + + Q + +G + ++ R R + +++ FT D++++P Sbjct: 326 DLVAPSLVQTAR----LGQGYSAVDLAEASAARTRLFQ-MMQAHFTR-----FDLLVSPV 375 Query: 408 -TTPTSAF---PLGKEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGL 461 T P A P+G+ E + G I FT N+ G PAIS+P +P+ L Sbjct: 376 LTAPPLALGYDPMGEIEIDGQPAGTIRGAWYPFTYPQNLTGHPAISLPWGRTRVGLPVAL 435 Query: 462 QLIGQPFREETLFSVGQIIEKEA 484 QL +R+ L + + + A Sbjct: 436 QLCAPWYRDRMLLRLADAVMRLA 458 >gi|227827649|ref|YP_002829429.1| amidase [Sulfolobus islandicus M.14.25] gi|229584853|ref|YP_002843355.1| Amidase [Sulfolobus islandicus M.16.27] gi|238619817|ref|YP_002914643.1| Amidase [Sulfolobus islandicus M.16.4] gi|227459445|gb|ACP38131.1| Amidase [Sulfolobus islandicus M.14.25] gi|228019903|gb|ACP55310.1| Amidase [Sulfolobus islandicus M.16.27] gi|238380887|gb|ACR41975.1| Amidase [Sulfolobus islandicus M.16.4] gi|323474699|gb|ADX85305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Sulfolobus islandicus REY15A] gi|323477433|gb|ADX82671.1| amidase [Sulfolobus islandicus HVE10/4] Length = 397 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 138/470 (29%), Positives = 200/470 (42%), Gaps = 95/470 (20%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 +E NS+ NA+I + EE+DK G +D + GIKD TKGI T A S Sbjct: 3 LEELNSKYNAFITL------HNIEENDK----GKLKD---VTFGIKDVILTKGIRTTAGS 49 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV---ISPWRSMDS 150 IL+ + P + V + G ++GK N EFA+G++N +S GP I P R Sbjct: 50 RILENYVPQKNAYVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPIDPERISGG 109 Query: 151 TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 SSGGS+ AV + IGTDTGGS+R P+S G +G KPT G G+I Sbjct: 110 --------SSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIP 161 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 F+ SLD GII V+D+ LL+ + DA N + V I K Sbjct: 162 FSWSLDTVGII---VKDNIGLLRRV-----FDAILPN--------------EKKKVEIAK 199 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDAGAK------IVEISLPHT-QYALPAYYIISPAEAS 323 L + + LK+ AK IVE+ LP QY IS AEAS Sbjct: 200 LRTRPRLGLFLFDEMEVSRILLKEIYAKLSSYFDIVEVDLPLLRQYGSKTRRTISLAEAS 259 Query: 324 S--------NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 S N +Y Y L ++G I Sbjct: 260 SYHKDWITENSDKYFKDTYTLLLDGMKI-------------------------------S 288 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 + Y+ A + R ++ ++ + F + +D IL+PTT A + +N Y T Sbjct: 289 ATDYIDAIRYRRVLIEEYIKVF-KNIDFILSPTTKIVAPKISDVLSNPLQFRE-YLIANT 346 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ G P+IS+P + ++P+GL + G+ +++ L V + I G Sbjct: 347 ELFNVVGAPSISIPFSTLN-ELPVGLMISGELYKDGDLLEVTEYILNVVG 395 >gi|58613939|gb|AAW79572.1| indole-3-acetamide hydrolase [Pseudomonas fluorescens] Length = 415 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/326 (33%), Positives = 167/326 (51%), Gaps = 29/326 (8%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-AR 69 E+ + SK +++ +LV+ ++ IE ++ +NA+I V A+ A A A+ D+ + G Sbjct: 35 ETAKLICSKTVTSRQLVEGWLARIE-THKALNAFISVDARAALAQADAYDQGMQRGKPCL 93 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI IKD K A + L F P + + +L GA+++GK NM E A Sbjct: 94 PLGGVPIAIKDNIQVKSFANSAGTPALADFYPKANAPIVDRLIAAGAIVIGKTNMQELAY 153 Query: 130 GSSN-ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G+S T+++ P I R+ + GGSS GS++AV L ++GTDTGGSIRQP Sbjct: 154 GTSGYNTAFHEPGIVGVRNAYDPTRIA-GGSSSGSASAVGARLVPIALGTDTGGSIRQPC 212 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG +PT GR S+ GI + + D AG +TR+V D +L + I G Sbjct: 213 ALNGCVGFRPTVGRYSQQGITPISHTRDTAGPMTRSVEDVVLLDQVITGLKPV------- 265 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP--- 305 VP A+ +G+P E+ D L P + T Q + L+ AG ++V +S+P Sbjct: 266 -VPPKAAAI-------RLGVPAEFWQD-LDPEVAATADQALKKLESAGFQLVPVSMPGVF 316 Query: 306 --HTQYALPAYYIISPAEASSNLARY 329 + +P I+ E S+L RY Sbjct: 317 ELDAKVGMP----IALYEGKSDLQRY 338 >gi|70731041|ref|YP_260782.1| putative amidase [Pseudomonas fluorescens Pf-5] gi|68345340|gb|AAY92946.1| amidase family protein [Pseudomonas fluorescens Pf-5] Length = 470 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 124/477 (25%), Positives = 207/477 (43%), Gaps = 37/477 (7%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIP 75 R K +S VE+ + + IE N +NAY + Q A AA S++R + G L+G+P Sbjct: 20 RDKRLSPVEVTEDALARIERFNPLVNAYCHIDHQGALDAARASEQRWLKGQPCGALDGLP 79 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD T+G+ T+ S P ++ + + GAV+LGK EF + Sbjct: 80 ASIKDLTLTRGMPTRKGSKTTAATGPWEVDAPFSGFMRAAGAVLLGKTTTPEFGWKGVTD 139 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG +PW + + T GGSSGG++AA + L G+D GGSIR P +FTGT Sbjct: 140 NPLYGITRNPWDT-----RLTAGGSSGGAAAAASLNLGVLHQGSDAGGSIRIPCAFTGTF 194 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKPT+G + + L G +TR+V D+ ++L+ +A D D + P Sbjct: 195 GIKPTFGYVPQWPASAMN-ILSHLGPMTRSVDDAVLMLQTVARPDARDG-LLGAPRSTPW 252 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + S++G+ + ++ + P + + + + L GA+I ++ P L + Sbjct: 253 LPENASLKGLRIAYSPDFGYVKVDPQVARVVARAVERLAQLGAQIEQVD-PGFSDPLEMF 311 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + + A+ A + L G +L + E I Sbjct: 312 NTLWFSGAARLTAALSPAQRALLDPG--LLRIAEQGEGISL------------------- 350 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN-DV 433 S Y A + R + AF + ++L+P P +AF G +G Sbjct: 351 --SDYSAALEARAALVAHMA-AFHERYHLLLSPMLPLTAFAAGHNVPPDSGLGEWMEWTP 407 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 F+ N+ PA S+P + +P+GL ++G F +E + + + E+ + PH Sbjct: 408 FSYPFNLTQQPAASLPCGFADDGLPVGLHVVGARFADEQVLRLCRAYEQ--AFPSPH 462 >gi|126463774|ref|YP_001044887.1| amidase [Rhodobacter sphaeroides ATCC 17029] gi|126105585|gb|ABN78115.1| Amidase [Rhodobacter sphaeroides ATCC 17029] Length = 452 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 124/461 (26%), Positives = 205/461 (44%), Gaps = 53/461 (11%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E +RL S + AVELV++ + I ++ A+ + A A A D R +G A Sbjct: 16 AELAERLASGAVRAVELVEACLAQIAAREPEVQAWAFLDGDHAMAQARALDARRQSGAAL 75 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+G+KD +G+ T G ++ V +L GA+++GK E A Sbjct: 76 GPLHGLPVGVKDVIDVRGMPTGLGLAGGAGRVAQADAFVAARLRAAGAILMGKTATAEAA 135 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + P + + D TPGGSS GS+AAVA + +IGT TGGS+ +P Sbjct: 136 F------------LEPAATRNPHDPARTPGGSSSGSAAAVAAGMVPLAIGTQTGGSVIRP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G G KP++G R G+++ +PSLD G+ R+V D A+L +A+AG+D D + Sbjct: 184 AAFCGIAGFKPSFGLIPRSGVLTQSPSLDTMGVFGRSVADVALLAEALAGHDPADPASLL 243 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAKIVEISLPH 306 P P + P L ++ P W+ ++ + Sbjct: 244 QPAPRLP-------ETAASDPPVTPTLAFVRP---PGWEAAHEEMRLALQELAELLGRDC 293 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 LPA + A+++L R R+ ++ EM + + G+ ++ Sbjct: 294 LALELPAVF-----GAAADLRR--------RI---NLAEMAHHYAGLA-GRAALSPLLSE 336 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 R + YL A + RT ++ F + D IL P P G + + + Sbjct: 337 ALAEGRRIPAADYLAALEARTALRAGLEPIFHR-CDAILCPAAP------GPAPDRATTG 389 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 I+N ++T GLPA+++P + +P+G QL+G P Sbjct: 390 DAIFNGLWT----FCGLPAVTLPLFVSSDGLPMGAQLVGPP 426 >gi|187477495|ref|YP_785519.1| amidase [Bordetella avium 197N] gi|115422081|emb|CAJ48604.1| putative amidase [Bordetella avium 197N] Length = 590 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 120/453 (26%), Positives = 211/453 (46%), Gaps = 37/453 (8%) Query: 29 SYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH 88 + I+A + ++N+ + + A +R +G L GIP+ +KD + + + Sbjct: 33 ARIRAYDQDGPKLNSVVCLAPGALEEARALDQERARHGPRGPLHGIPLLVKDNYDSADMP 92 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 T A + L +P ++ +L + GAV++GK + E A G +N +S G +P+ Sbjct: 93 TSAGALALATHQPTQDAWALGRLREAGAVIVGKTTLHELAAGITNTSSLTGSTRNPY--- 149 Query: 149 DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI 208 + PGGSSGG++AA+A A +G+DT GS+R PA+ V ++ T G R GI Sbjct: 150 --DPRRVPGGSSGGTAAAIAASFATAGLGSDTSGSLRIPAAVNNLVSLRATPGLIGRSGI 207 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 + +P+ D AG + R+V D A+LL A+AG D D + R + ++G+ +G+ Sbjct: 208 VPLSPTQDCAGPLARSVHDLALLLDALAGADPQDPASRMGGGGFHARLNPEGLKGLRIGV 267 Query: 269 PKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 E + D I + ++ + ++D GA +VEI +P L A ++P E + LA Sbjct: 268 IGELFGSDADEEEISRRCREALDAMRDLGADVVEIQIPQLTERLRASS-LTPLEFRTALA 326 Query: 328 RYDGVRYGLRVEGKDILEMYENT--RSIG--FGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 Y L + T S+G + + H+ + L + DS+ R Sbjct: 327 AY--------------LARHPQTPIHSLGGILKRGLHHQALDAVLRLRNATEDSNGSRLA 372 Query: 384 KIRTLIK--RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 L + RD + G+DV+ P+ +G+ + + N + + Sbjct: 373 ATLLLRQALRDSVQQAMHGLDVLAYPSLRRRPAMIGEPQGGA-------NAQLSPGI--- 422 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G PA+ +PA +PLGL+L+G+P ++ L Sbjct: 423 GFPALCLPAGFTSDALPLGLELLGRPGSDQALL 455 >gi|294627869|ref|ZP_06706448.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597783|gb|EFF41941.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 509 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/484 (29%), Positives = 219/484 (45%), Gaps = 31/484 (6%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 R+ S S+++L +Y+Q +I+ + ++NA IE+ Q A A A D G R Sbjct: 7 RMASGQSSSLQLTRAYLQRIASIDRAGPRLNAVIELNPQ-AEADARALDAERKAGHVRGP 65 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + A S L FRP ++ V Q+L GAV+LGK N+ E+A Sbjct: 66 LHGIPVLLKDNIDALPMVNSAGSLALAEFRPDRDAFVVQRLRAAGAVILGKTNLSEWANF 125 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ++S P GSS G+ AA+A L IGT+T GSI PAS Sbjct: 126 RSTQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAASLATVGIGTETDGSITCPASV 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--ATCVNL 248 G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA D D Sbjct: 186 NGLVGLKPTVGLVSRDGIIPISTSQDTAGPMTRSVADAAAVLQAIAAPDPQDPATAKAPA 245 Query: 249 PVPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 DY L S++G +G+ + R D P I + + L+ AGA +VE +L Sbjct: 246 ASADYLAHLKPDSLRGARLGLLRNPLRED---PAIAAALDRAVQTLRAAGATVVETALVT 302 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN--TRSIG-FGQEVKHRI 363 A ++ E + L Y + + ++ N R + FGQE+ + Sbjct: 303 DGKWDAAEQMVLLVEFKAGLNAYLQNHHAPVSTLQQLIAFNRNHAQREMPYFGQELFEQA 362 Query: 364 MIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQG--VDVILTPTTPTSAFPLGKEE 420 + D+ YL AR + L + +A + +D ++ PTT G Sbjct: 363 QAAPGL-----DDAGYLSARANAKRLAGPEGIDAALKADRLDALIVPTT-------GAAW 410 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + G + A +AG P++SVP + +PLGL +G + E L + Sbjct: 411 TTTLGKGDSFPGAGYGAAAVAGYPSLSVPMGQAQ-GLPLGLLFMGTAWSEPRLIELAYAY 469 Query: 481 EKEA 484 E+ + Sbjct: 470 EQRS 473 >gi|284997770|ref|YP_003419537.1| Amidase [Sulfolobus islandicus L.D.8.5] gi|284445665|gb|ADB87167.1| Amidase [Sulfolobus islandicus L.D.8.5] Length = 397 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 138/467 (29%), Positives = 202/467 (43%), Gaps = 89/467 (19%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 +E NS+ NA+I + EE+DK G +D + GIKD TKGI T A S Sbjct: 3 LEELNSKYNAFITL------HNIEENDK----GKLKD---VTFGIKDVILTKGIRTTAGS 49 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 IL+ + P + V + G ++GK N EFA+G++N +S GP +P + Sbjct: 50 RILENYVPQKNAYVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVNP-----E 104 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSSGGS+ AV + IGTDTGGS+R P+S G +G KPT G G+I F+ Sbjct: 105 RISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSW 164 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLD GII V+D+ LL+ + DA N + V I K Sbjct: 165 SLDTVGII---VKDNIGLLRRV-----FDAILPN--------------EKKKVEIAKLRT 202 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAK------IVEISLPHT-QYALPAYYIISPAEASS-- 324 L + + LK+ AK IVE+ LP QY IS AEASS Sbjct: 203 RPRLGLFLFDEMEVSRILLKEIYAKLSSYFDIVEVDLPLLRQYGSKTRRTISLAEASSYH 262 Query: 325 ------NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 N +Y Y L ++G I + Sbjct: 263 KDWITENSNKYFKDTYTLLLDGMKI-------------------------------SATD 291 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 Y+ A + R ++ ++ + F + +D IL+PTT A + +N Y T Sbjct: 292 YIDAIRYRRVLIEEYIKLF-KNIDFILSPTTKIVAPKISDVLSNPLQFRE-YLIANTELF 349 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ G P+IS+P + ++P+GL + G+ +++ L V + I G Sbjct: 350 NVVGAPSISIPFSTLN-ELPVGLMISGELYKDGDLLEVTEYILNVVG 395 >gi|268316627|ref|YP_003290346.1| Amidase [Rhodothermus marinus DSM 4252] gi|262334161|gb|ACY47958.1| Amidase [Rhodothermus marinus DSM 4252] Length = 566 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 120/502 (23%), Positives = 218/502 (43%), Gaps = 75/502 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +L FM V+E L+++ + +VEL + Y+ ++ + + A I ++A A A ++D+ Sbjct: 119 EDLAFMTVAELSYLLKTRQVRSVELTELYLARMKRYDPVLKAVITYTEERAMAQARQADE 178 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G R L G+P G KD A G T + + + V +KL GAV++ Sbjct: 179 ELDAGHWRGPLHGVPYGAKDLLAVPGYRTTWGAKPYENQVLDVTAAVIEKLDAAGAVLVA 238 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL + A G + + G +PW +++ + G +A + F +IG++T Sbjct: 239 KLTLGALAWG---DVWFGGQTKNPW-NIEQGSSGSSAGPGAAVAAGLVPF----AIGSET 290 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI P++ G G +PT+G SR G ++ A ++D+ G + R+ D A++ I G D Sbjct: 291 LGSIVSPSTRNGVTGHRPTFGAVSRYGAMTLAWTMDKLGPMARSAEDCALVFDVIRGRDP 350 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ------QGISWLKD 294 D + ++P P ++ D ++ R+ YL+ ++ ++ Q + L+D Sbjct: 351 RDPSTRDMPFP-FDPNFDV----------RQLRVGYLAEAFEEDYENREADLQTLQVLRD 399 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G ++ I LP LP ++ E + A + R G G D+ M R+ Sbjct: 400 LGIELKPIRLPDD---LPVSAMLLTLEVEAAAAFDELTRTG----GVDL--MVRQGRNTW 450 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 H + +V + +L+A +IRTL+ + E F + VDV ++PT Sbjct: 451 -----PHVFRVARFVPA-----VEFLQANRIRTLLMQRMAEVFRK-VDVFVSPTF----- 494 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA--------LCEKKMPLGLQLIGQ 466 G I N+ G P + VP A L ++ P + IG Sbjct: 495 --------GGGTLRI--------TNLTGHPCVCVPNAFHPLKDNPLSPRRRPGSITFIGG 538 Query: 467 PFREETLFSVGQIIEKEAGYFR 488 +R+ + + ++ + R Sbjct: 539 LYRDAEVLMLAHAYQQATDFHR 560 >gi|317404426|gb|EFV84842.1| mandelamide hydrolase [Achromobacter xylosoxidans C54] Length = 469 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 124/433 (28%), Positives = 200/433 (46%), Gaps = 37/433 (8%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 AR LEG+P+ IKD G+ A + L F P ++ + ++L + GA+++GK +M E Sbjct: 60 ARPLEGVPVAIKDNIHVAGLPNTAGTPALRDFIPAEDAPIVRRLREAGAIIVGKTHMHEL 119 Query: 128 AMGSSN-ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 A G S T+Y GP + R+ ++ GGSS GS AAV L A++GTDTG S+R Sbjct: 120 AFGVSGYNTAYPGPRGAGTRNAYDPERIA-GGSSSGSGAAVGARLVPAALGTDTGASVRL 178 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+ G VG +P+ GR GI + + D G I + D A+L + G D Sbjct: 179 PAALNGAVGFRPSVGRYDGSGITPISHTRDTPGPIANGMADIALLDAVLTGDDR------ 232 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP- 305 P+P ALD + + +G+P + D L P + Q + L+ AG ++ + +P Sbjct: 233 --PLP----ALDAA--SLRLGLPGYFWQD-LDPQVQAVAQAALERLRAAGVTLLPLDMPG 283 Query: 306 ----HTQYALPAYYIISPAEASSNLARYD-GVRYG---LRVEGKDILEMYENTRSIGFGQ 357 + +P + ++ LAR++ GV + R+ D+ ++++ G Sbjct: 284 LEASNAATGMPLCLYEQKPDLTAYLARHEVGVSFEELVARISSPDVKAIFDDLVVPGVLP 343 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPL 416 G + YDS R + R AFEQ + +L PT P Sbjct: 344 TPS-----GELLPLQPLYDSAIAVHRGALIDVYR---RAFEQHALHGLLFPTVPVPPPLA 395 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E ++ S + +V + AGLP +S+PA L + +P+GL++ G P + +V Sbjct: 396 APEASSLESFLRLARNVDP--GSNAGLPGLSLPAGLSDDGLPIGLEVDGLPGEDRQTLAV 453 Query: 477 GQIIEKEAGYFRP 489 G +E G P Sbjct: 454 GVALEPLLGRLAP 466 >gi|304404983|ref|ZP_07386643.1| Amidase [Paenibacillus curdlanolyticus YK9] gi|304345862|gb|EFM11696.1| Amidase [Paenibacillus curdlanolyticus YK9] Length = 509 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 115/303 (37%), Positives = 163/303 (53%), Gaps = 20/303 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 + + ++AV+LV Y++ I + +N+ +E+ A ++R +G L GIP Sbjct: 21 MEAGTLNAVQLVQLYVERIRKYDGPINSILELNPDALEIAFSLDEERRRSGSRGLLHGIP 80 Query: 76 IGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD T+ +HT A S L ++ V KL + GAV+LGK NM E+A S+ Sbjct: 81 ILLKDNIDTRDRMHTSAGSVALANSIAPADAFVAAKLREAGAVLLGKANMTEWANAMSDT 140 Query: 135 -----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +S G V++P+ + + S GS+AAVA CAASIGT+T GSI PAS Sbjct: 141 MWAGYSSRGGIVLNPYGPGNVFVGGS----SSGSAAAVAASFCAASIGTETSGSIVCPAS 196 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 + VGIKPT G SR GII + S D AG I RTV D+AILL AI G DE D ++ Sbjct: 197 YNFAVGIKPTVGLVSRSGIIPLSRSQDTAGPIARTVTDAAILLGAITGEDEQDEATLHAK 256 Query: 250 ---VPDYERALD-QSIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAKIVE-I 302 DY LD + I+ +GIP+ Y +LD + TI + I+ L+ GA IV+ + Sbjct: 257 QRVYEDYTPFLDARFIRQARIGIPRYYCEQLDEAALTI---LESAIAVLRSLGATIVDPV 313 Query: 303 SLP 305 LP Sbjct: 314 ELP 316 >gi|187928497|ref|YP_001898984.1| Amidase [Ralstonia pickettii 12J] gi|187725387|gb|ACD26552.1| Amidase [Ralstonia pickettii 12J] Length = 491 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 135/495 (27%), Positives = 210/495 (42%), Gaps = 63/495 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKR 62 + + A+ SR R+ ++D+S VE++++++ I+ N +NA + + A+ A A E D Sbjct: 19 VQWSAIELSR-RIHARDVSCVEVMEAFLAQIDRHNPTVNAVVARIDAESAIDQARERDVL 77 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G + + G P KD AT G+ T S + P ++S V +++ G V++GK Sbjct: 78 LSQGLSGGWMHGFPQAPKDLAATAGMVTAMGSLAMARNVPTHDSIVVERIRRQGTVLIGK 137 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG + W S GGSSGG++AA+A + + G+D Sbjct: 138 TNTPEFGLGSHTYNRVYGTTRNAWNPERSA-----GGSSGGTAAALALNMLPVADGSDMM 192 Query: 182 GSIRQPASFTGTVGIKPTYGRC--SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GS+R PA++ G++P+ GR G + F L G + R D A LL AGYD Sbjct: 193 GSLRNPAAWNNIYGLRPSLGRVPYGPTGDVFFQ-QLGTEGPMARNPHDLAWLLATQAGYD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 P +L + +++R Q I WL D G + Sbjct: 252 -----------PRAPLSLSDDPACFMQPLHRDFR------------QARIGWLGDFGGYL 288 Query: 300 V---EISLPHTQYALPAY-------YIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 E+ L ++AL + + P A L L V G L +Y N Sbjct: 289 AVDREV-LAVNEHALDTFDTLGCHVETVRPFFAMDALWECWCTLRALSVSGNLGL-LYAN 346 Query: 350 --TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 TR + E I G S D H RA R + F D ++ P Sbjct: 347 AATRDL-LKPEAIWEIEHGR---SRTAIDIH--RAIATRASWYQALLRQFAH-YDFLVLP 399 Query: 408 TTPTSAFPLGKEENNSGSMG------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 T + FP +E + G H + +V + +AG+PA S+P+ L +PLGL Sbjct: 400 CTQVAPFP-AEEHWPKAAAGRAMDTYHRWMEV-VIGATLAGVPAASLPSGLTADGLPLGL 457 Query: 462 QLIGQPFREETLFSV 476 Q+I P E L + Sbjct: 458 QVIAPPRSEFALLQL 472 >gi|86751165|ref|YP_487661.1| allophanate hydrolase [Rhodopseudomonas palustris HaA2] gi|86574193|gb|ABD08750.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 599 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 108/414 (26%), Positives = 185/414 (44%), Gaps = 36/414 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD G+ T A ++P +ST KL GA+++GK N+D+FA G Sbjct: 64 LYGVPVAVKDNIDVAGLPTTAACPAF-AYQPAQDSTAVAKLRAAGAIIIGKTNLDQFATG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG P +M + PGGSS GS+ AV L S+GTDT GS R PA Sbjct: 123 LVGVRSPYG---IPRNAMRA--DLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAML 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KP+ G S G++ +LD + TV D+ I L+ + D D P+ Sbjct: 178 NNIVGLKPSLGLISTTGLVPACRTLDCISVFALTVDDAMIALRVMGTPDATDPYSRARPI 237 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 D+ +G+P+ +L + ++ + + GA+++EI Sbjct: 238 APMSAMPDRP----RLGVPRPDQLQFFGDQQSEQAYADALQRWTSLGAELIEID------ 287 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 ++P ++ L YDG R I E+ + T V +I +G Sbjct: 288 -------VAPLYETARL-LYDGPWVAERYLA--IRELIDATPDA--LHPVTRQITLGGKA 335 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 +S+ + R + +R L + F +D ++ PT PT A+ + + + ++ Sbjct: 336 ISAADTFAALYRLQALRKLAEPAFA-----AIDALVLPTAPT-AYTVEQVLADPVTLNSR 389 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +T VN+ L +++PA++ +P G+ L+ R+ L S+G++ + Sbjct: 390 LG-TYTNFVNLLDLCGLAIPASIRADGIPFGVTLLAPGGRDAELASLGRMFHAD 442 >gi|256253681|ref|ZP_05459217.1| amidase [Brucella ceti B1/94] gi|261220818|ref|ZP_05935099.1| amidase [Brucella ceti B1/94] gi|260919402|gb|EEX86055.1| amidase [Brucella ceti B1/94] Length = 463 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 133/493 (26%), Positives = 219/493 (44%), Gaps = 39/493 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++LP D + LD ++G+ +G+ +D + + + G Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL-----------WLDAGFGEPVG----GGE 273 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFG 356 + +A A II P N DG+ R+ DI +M ++ Sbjct: 274 TRAAVEAAAKLFA-DAGAIIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQA---- 328 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ I T + YL ++ + R+ A + D I++PT P +P Sbjct: 329 -KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPMPTYPA 385 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + + + Sbjct: 386 EWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDLGVLRL 445 Query: 477 GQIIEKEAGYFRP 489 + E RP Sbjct: 446 AKAYEDMRPVQRP 458 >gi|118083492|ref|XP_416561.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 679 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 132/497 (26%), Positives = 227/497 (45%), Gaps = 57/497 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESD 60 +F + + D RS ++ ++ + I +E+ S + A ++ ++ AE S Sbjct: 206 FSFKGIKDYLDCYRSGKLTPSQVAKNIIAVLEDCDKSTPPLRAIVQWDQEQIMLMAEAST 265 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVM 118 R N L+GIP+ +K+ F + + + L G P E +TV +KL + GAV+ Sbjct: 266 ARYRNKCTLSYLDGIPVCLKEEFKVVPYYHRVGTVYL-GTEPETEDATVAKKLREAGAVI 324 Query: 119 LGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +G NM E G++ N Y+ +P++ + FT GGSS GS+AAVA LC +I Sbjct: 325 IGVSNMHELGTGTTGCNPNRYHKIPRNPYKP----NHFT-GGSSSGSAAAVAAGLCPVAI 379 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTD GGS+R PA+F G VG+K T+GR S G + + S G I +V D+AI+ +A Sbjct: 380 GTDGGGSVRIPAAFCGVVGLKGTFGRISSHGSLPLSYSTVSVGPICTSVADAAIVYSILA 439 Query: 237 --------GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 G + AT ++ PD ++G+ +G+ + I ++ Sbjct: 440 EPDPLYPYGLKQPKATLSDMCAPD--------LKGLKLGVDWTF-FKACDAEILSVCEKA 490 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + +L++ GA +VE+SLP + A+ I + E +D L+ Sbjct: 491 VEYLQNLGASVVEVSLPEMEEVKIAHAIC------------------ILSEMRDFLQPDF 532 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N E + + +G+ + Y+ A + RT R E F V+ ILTP Sbjct: 533 NKHFQEMNLETRASLALGSQFTA-----LDYITANRQRTRSMRFLREIFTT-VNCILTPA 586 Query: 409 TPTSAFPLGKEENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 ++A + + + +GS + + F N G+P + VP +P+G Q++ Sbjct: 587 IASTAPRIHESDLLTGSSNISFTMRSMRFMQLGNFTGIPGLIVPIGYSTAGLPIGFQVMA 646 Query: 466 QPFREETLFSVGQIIEK 482 + + E L +G +E+ Sbjct: 647 KWWDEAVLLRIGLKLEQ 663 >gi|254712870|ref|ZP_05174681.1| amidase [Brucella ceti M644/93/1] gi|254716776|ref|ZP_05178587.1| amidase [Brucella ceti M13/05/1] gi|261218573|ref|ZP_05932854.1| amidase [Brucella ceti M13/05/1] gi|261320578|ref|ZP_05959775.1| amidase [Brucella ceti M644/93/1] gi|260923662|gb|EEX90230.1| amidase [Brucella ceti M13/05/1] gi|261293268|gb|EEX96764.1| amidase [Brucella ceti M644/93/1] Length = 445 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 186/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 168 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 225 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 226 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 274 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A + AS+ LA D V+ L V K LE Y Sbjct: 275 RLKEATRIGSIAGIEANHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 326 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 361 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 362 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 419 Query: 475 SVGQIIEK 482 + IEK Sbjct: 420 AAALSIEK 427 >gi|114769327|ref|ZP_01446953.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [alpha proteobacterium HTCC2255] gi|114550244|gb|EAU53125.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [alpha proteobacterium HTCC2255] Length = 447 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 131/491 (26%), Positives = 226/491 (46%), Gaps = 61/491 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + E N + +E+ + S +S+V+LV S + I N++ Q+ A+ V + KA A+E D Sbjct: 2 IREPNTLTATEAASSIASGVLSSVDLVQSCLDQISNTDDQIKAWEYVDSDKALEQAKECD 61 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G + L G+P+G+KD T + TQ + + G + ++ + ++L + GAV++ Sbjct: 62 RIRRQGKSIGRLHGVPVGLKDIIDTVDMPTQLGTAVFQGRQTKKDARLVERLREAGAVIM 121 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK E A ++T R+ + ++ TPGGSS GS+AAVA ++GT Sbjct: 122 GKTVTTELAFLHPSKT----------RNPHNLER-TPGGSSSGSAAAVAANHIPIAVGTQ 170 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ +PASF GT G KPT G SR GI+ + +LDQ G R++ D +L + YD Sbjct: 171 TNGSVIRPASFCGTYGFKPTAGIISRSGILQTSETLDQVGCFGRSLADIGLLGDVLGSYD 230 Query: 240 ECDATCVNLPVPD-YERALDQSIQGMTVGIPKEYRLDYLS-PTIDK---TWQQGISWLKD 294 + D + P P Y+ AL P + +L P D+ ++G++ + D Sbjct: 231 QNDINSFSRPRPKMYDGALSDP--------PVTPNIAWLDLPFYDRLASETREGLNAIND 282 Query: 295 -AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV--RYGLRVEGKDILEMYENTR 351 GA++ + ++ A+ SNL Y + D+ + + Sbjct: 283 ILGAQVSK---------------MTAADQLSNLVAVQARIHEYEICKHQSDVFDQSWD-- 325 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G +K I + S D+ ++ L +DF F D I+ P+ Sbjct: 326 --GLSDTLKLAIKRARKISSDEYSDALAVK------LSAQDFFADFFTEYDAIIAPSAIG 377 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 A P E + +F +AGLP +++P + E +MP+G+QLIG+ ++ Sbjct: 378 EA-PFISEATTG-------DPIFCTLWTLAGLPTVTLPLLVGENEMPIGVQLIGEAEQDG 429 Query: 472 TLFSVGQIIEK 482 L +++ Sbjct: 430 RLLRTANWLQQ 440 >gi|284038224|ref|YP_003388154.1| amidase [Spirosoma linguale DSM 74] gi|283817517|gb|ADB39355.1| Amidase [Spirosoma linguale DSM 74] Length = 526 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 16/297 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDK--RIINGDARD 70 +++ ++AV+L+ Y+ IE + Q +NA I +V KA A A D + Sbjct: 41 MQAGKLTAVQLLQLYLDRIEAYDKQGPYLNAII-MVNPKALAEARRLDSLYKATGKMVGP 99 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + T + T + + P ++ V +K+ + GA+++ K N+ EFA Sbjct: 100 LHGIPVIVKDNYDTFDMPTTNGTLAMKKSIPPDDAFVVRKIREAGAIIIAKSNLAEFAYS 159 Query: 131 SSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S I P S + D K T GSSGG++AAV A +GTDTG SIR PAS Sbjct: 160 GQFSVS----SILPGYSRNPYDTKRTTAGSSGGTAAAVTANFGAIGLGTDTGSSIRGPAS 215 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL- 248 VG +PT G SR GI A + D G I RTV D+ +L IAGYD+ D Sbjct: 216 HQSLVGFRPTLGLVSRDGIAPLAMTNDTGGPICRTVEDAVRVLDVIAGYDKADTVTKRSA 275 Query: 249 -PVPD-YERALDQS-IQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVE 301 +P Y + LD+ ++G +G+ ++ + S P + + + + L+ AGA +++ Sbjct: 276 GKIPQTYRQFLDKDGLKGARIGVFRQMVMPKNSDPQVYALFNKALDELRAAGAIVID 332 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%) Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 G PA SVP +P GLQ G+PF E TL + E+ + RP Sbjct: 462 GFPAFSVPMGFTYDVLPAGLQFFGRPFSEPTLIKLAYAYEQATHHRRP 509 >gi|300311162|ref|YP_003775254.1| amidase family protein [Herbaspirillum seropedicae SmR1] gi|300073947|gb|ADJ63346.1| amidase family protein [Herbaspirillum seropedicae SmR1] Length = 450 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 114/419 (27%), Positives = 188/419 (44%), Gaps = 50/419 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGKLNMDEFA 128 LEG+P+ +KD F G T A S +L G +P + V Q L GA+++GK NM EFA Sbjct: 69 LEGVPVSVKDLFDVAGETTLAGSVVLRG-KPVASAHAAVVQNLLKAGAILIGKTNMTEFA 127 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +YG + W + PGGSS G++ +V + A++G+DTGGS+R P+ Sbjct: 128 YSGLGINPHYGTPQNAWERNIEGGRI-PGGSSSGAAISVTDGMAFAAVGSDTGGSVRIPS 186 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G G KPT R S G++ + LD G + +V+ AI+ +AG Sbjct: 187 ALNGLTGFKPTAARVSMQGVLPLSAYLDSIGPLAVSVQCCAIMDAVLAGE---------- 236 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 DY L ++G+ + P LD + T+ + ++ + L AGA IVE Sbjct: 237 ---DYVAVLAHPLRGLRLLAPTNVVLDGMDDTVGQAYRTALGKLAAAGAMIVEAE----- 288 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +PA+ ++ A + + + + EN + G+ Q V RI+ G Sbjct: 289 --VPAFNALAAINAKGGFTAAEAYAWHRAL-------IAEN--AAGYDQRVVSRILRGKD 337 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS----G 424 + ++ D + R R I + EA G D ++ PT P A + + + + G Sbjct: 338 MSAADLLDVLHARPRWIAQV------EAQLAGYDALVMPTVPIVAPRIAELQASDDAYYG 391 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 + G + + +N A+S+P C P+GL L +++ L S+G +E Sbjct: 392 ANGKMLRN--PTLINFLDGCALSLP---CHAPGSAPVGLSLAACGGQDKRLLSIGLAVE 445 >gi|161621055|ref|YP_001594941.1| amidase [Brucella canis ATCC 23365] gi|161337866|gb|ABX64170.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [Brucella canis ATCC 23365] Length = 462 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 137/498 (27%), Positives = 220/498 (44%), Gaps = 50/498 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + AR AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADALPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTIMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLD--YLSPTIDKT---WQQGISWL 292 D D ++LP D + LD ++G+ +G+ LD + P +T + Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL----WLDAGFGEPVGGETRAAVEAAAKLF 284 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTR 351 DAGA II P N DG+ R+ DI +M + Sbjct: 285 ADAGA------------------IIEPVAPFLNRTMIDGLDRFWRARSWSDIKKMTPENQ 326 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + ++ I T + YL ++ + R+ A + D I++PT P Sbjct: 327 A-----KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPM 379 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +P + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + Sbjct: 380 PTYPAEWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDL 439 Query: 472 TLFSVGQIIEKEAGYFRP 489 + + + E RP Sbjct: 440 GVLRLAKAYEDMRPVQRP 457 >gi|83951330|ref|ZP_00960062.1| putative amidotransferase, subunit A [Roseovarius nubinhibens ISM] gi|83836336|gb|EAP75633.1| putative amidotransferase, subunit A [Roseovarius nubinhibens ISM] Length = 466 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 121/484 (25%), Positives = 208/484 (42%), Gaps = 37/484 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +E+ RLR +++S +ELV++ I+ IE ++++NA +AR A D Sbjct: 1 MTATEAVARLRRRELSPLELVEASIERIETVDTEVNALPIHCFDQAREEARNFDADAHKD 60 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + + L G+PI +KD +G T S I D ++TV Q L +NGA+ + K N+ Sbjct: 61 NPKSLHGLPIAVKDYNDVRGAVTTYGSPIFADNVAEKSDATVRQ-LEENGAITVAKSNVP 119 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E+A G + +G +PW S + G ++ +S +V + G D GGS+R Sbjct: 120 EWA-GGNTFNPVFGASRNPWDLRMSVGGSSGGSAAALASGSV-----WLATGNDLGGSLR 173 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G VG++P GR R + +L G + R V D A++L A G D Sbjct: 174 TPAAFNGIVGLRPGPGRVPRGSRLPPMDTLWVEGPMARNVDDLALMLDAGIGQQADDPLS 233 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + AL ++ V + + + I + + D GA + + +P Sbjct: 234 FDQTGTSFVAALTETGMPERVAFSPDLSIVSMEKEIAEICGGAATTFGDLGADVTD-DIP 292 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 L A+ + V + +E IL + + E+ I Sbjct: 293 DFTGVLEAFQT------------HRAVLFATLME--PILAQHRDR----IAPEIIGNIER 334 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNS 423 G + S+ +++ +RA + ++ AF D+++ P + FP+ + Sbjct: 335 GLNITPSQIFEAERVRAELYKKMV------AFFDTHDLLICPAASIAPFPVEQRYVTEID 388 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G Y D F T A+ M P ISVP +P+G+Q++G+P E L + E Sbjct: 389 GKPCETYIDWFSITFALTMTACPTISVPCGFTASGLPVGVQIVGKPRGEAALLRAARRFE 448 Query: 482 KEAG 485 + G Sbjct: 449 EALG 452 >gi|330886187|gb|EGH20088.1| amidase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 408 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 105/350 (30%), Positives = 164/350 (46%), Gaps = 22/350 (6%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + ++++V LV +Q IE N +NA IE+ + A++ +R Sbjct: 42 FESGVELQRRMSAGNLTSVGLVTDLLQRIEVLNKNGPALNAVIEINPDALQIASQMDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI +KD T + T A + + G ++ V Q+L D GA+++GK Sbjct: 102 SRGEKRGPLHGIPILVKDNLDTGDQMQTTAGALSMVGLPAPRDAFVVQRLRDAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT------PGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W + P GSS GS+ +A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSRRGGQTRHPYDLSADPLGSSSGSAVGLAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G +G++PT G SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVIGLRPTLGLLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECDATC--VNLPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +G D D + V +Y L ++ G +G P D + D +Q+ S L Sbjct: 276 SGNDPLDEATARASTDVVNYVDHLRTDALSGKRLGYPNHTH-DGMPMDDDPEFQKVKSRL 334 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD 342 AGA +V + +P + Y++ + L Y R GL V D Sbjct: 335 SAAGAILVPVDVPSIDST--SEYLVLLHDFKRELNAYLSTRTGLGVSTLD 382 >gi|331696844|ref|YP_004333083.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326951533|gb|AEA25230.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 488 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 128/470 (27%), Positives = 217/470 (46%), Gaps = 52/470 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ +++++R + + ++SA EL + + A+ ++ +I + A ARA A E+D+ Sbjct: 52 LSNGSIADARAAMDAGEVSAAELTEQAL-AVAGEHADDAIFIHLTASAARAQAAEADR-- 108 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + AR L GIP+ +K+ G+ T S + ++ V ++L GAV++G Sbjct: 109 -SARARGPLHGIPVTVKNNLDVAGLPTTCGSPVFADRLATSDAEVVRRLRAAGAVVVGTT 167 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E A GS++ + G V +P R+ + GGS+ + + GF AS+GTD G Sbjct: 168 NLHEMAFGSTSVNPHTGAVANP-RAPGHVAGGSSGGSAAAVALGI-GF---ASLGTDAAG 222 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPS-LDQAGIITRTVRDSAILLKAIAGYDEC 241 SIR PAS G VG+KPT+G G++ + + +D G +T +V D+ +LL IAG Sbjct: 223 SIRMPASCCGVVGLKPTHGTVPLRGMVPTSMTHVDHIGPLTTSVADARLLLDVIAG---- 278 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P P A + G+ VG+P+ Y L ++ + I L AGA+ Sbjct: 279 -------PGPGAGDA--AGLDGVAVGLPEAYFWTGLDSDVESVCRAAIGCLAAAGARPTP 329 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ++ + + P A + A + L G D + ++ Sbjct: 330 VACDIGE--------LMPLLAVAMFAEAHVLHAPLIAAGPDR-----------YSPALRD 370 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R++ G VL +D Y+RA + R L+ A E GVD++ PT P + ++ Sbjct: 371 RLLAGGTVLG---HD--YVRALRARRLVVDRIAAALE-GVDLLAMPTMPVPPVRIADVDD 424 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + T N +G P IS+PA +P+GLQL+G P+ + Sbjct: 425 DPRVA---LMARHTSPFNQSGHPVISLPAGATPDGLPVGLQLVGHPYADR 471 >gi|77465371|ref|YP_354874.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Rhodobacter sphaeroides 2.4.1] gi|77389789|gb|ABA80973.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Rhodobacter sphaeroides 2.4.1] Length = 452 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 123/460 (26%), Positives = 205/460 (44%), Gaps = 51/460 (11%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E +RL S + AVELV++ + I ++ A+ + A A A D R +G A Sbjct: 16 AELAERLASGAVRAVELVEACLAQIAAREPEVQAWAFLDGDHAMAQARALDARRQSGAAL 75 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+G+KD +G+ T G ++ V +L GA+++GK Sbjct: 76 GPLHGLPVGVKDVIDVRGMPTGLGLAGGAGRVAQADAFVAARLRAAGAILMGKT------ 129 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 ++ E ++ P P TPGGSS GS+AAVA + +IGT TGGS+ +PA Sbjct: 130 --ATAEAAFLEP---PATRNPHDPARTPGGSSSGSAAAVAAGMVPLAIGTQTGGSVIRPA 184 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G G KP++G R G+++ +PSLD G+ R+V D A+L +A+AG+D D + Sbjct: 185 AFCGIAGFKPSFGLIPRSGVLTQSPSLDTMGVFGRSVADVALLAEALAGHDPADPASLLQ 244 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAKIVEISLPHT 307 P P + P L ++ P W+ ++ + Sbjct: 245 PAPRLP-------ETAASDPPVTPTLAFVRP---PGWEAAHEEMRLALQELAELLGRDCL 294 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 LPA + A+++L R R+ ++ EM + + G+ ++ Sbjct: 295 ALELPAVF-----GAAADLRR--------RI---NLAEMAHHYAGLA-GRAALSPLLSEA 337 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 R + YL A + RT ++ F + D IL P P G + + + Sbjct: 338 LAEGRRIPAADYLAALEARTALRAGLEPIFHR-CDAILCPAAP------GPAPDRATTGD 390 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 I+N ++T GLPA+++P + +P+G QL+G P Sbjct: 391 AIFNGLWT----FCGLPAVTLPLFVSSDGLPMGAQLVGPP 426 >gi|302560487|ref|ZP_07312829.1| amidase [Streptomyces griseoflavus Tu4000] gi|302478105|gb|EFL41198.1| amidase [Streptomyces griseoflavus Tu4000] Length = 466 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 131/493 (26%), Positives = 212/493 (43%), Gaps = 44/493 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++EL + D R + VE + ++ E ++NA++ ++A+ A A E+ Sbjct: 4 VTELTELTALRLLDGYRRGEFGPVEATRAALERAEAVQPEVNAFVRLLAEDALERAAEAQ 63 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILD-GFRPHYESTVTQKLWDNGAVM 118 +R G+ R L+G+P+ +KD +G T S +D R ++ +L ++GAV Sbjct: 64 ERWRRGEPRGLLDGVPVTVKDILLLRGAPTLKGSLTIDPAGRWDEDAPAVARLREHGAVF 123 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK EF ++ G +P T GGSSGG++AAVA ++GT Sbjct: 124 LGKTTTPEFGWKGVTDSPLSGVTRNP-----HDPARTAGGSSGGAAAAVALGAGPLALGT 178 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PA+F G +KPTYGR +F +L G +TR D+A+L+ I G Sbjct: 179 DGGGSVRIPAAFCGIFALKPTYGRVPLYPASAFG-TLAHVGPMTRDAADAALLMDVIGGP 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + + + L ++G+ V P + P + ++ + L GA Sbjct: 238 DSRDWSALGPAAGSFSEGLAGGVRGLRVAYSPSLGGQVRVVPEVAAAVRRAVERLAGLGA 297 Query: 298 KIVEI--SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM-YENTRSIG 354 + E L A + A + +L R + + +L+ R+ G Sbjct: 298 YVEETDPDLADPVEAFHTLWFAGAARVTQHLGR----------DQRALLDPGLREIRAAG 347 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 +H + YL A +R + R F D+++TPT P +AF Sbjct: 348 ----ARHSAL-------------DYLAAVDVRMDLGRRMGR-FHDTYDLLVTPTMPITAF 389 Query: 415 PLGKEENNSGSMGHIYN--DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 G E GS H + FT NM PA +VP +P+GLQL+ R++ Sbjct: 390 EAGAEVPK-GSGHHRWTGWTPFTYPFNMTQQPAATVPVGADADGLPIGLQLVAARHRDDL 448 Query: 473 LFSVGQIIEKEAG 485 + V + EAG Sbjct: 449 VLRVAHTL-YEAG 460 >gi|311109397|ref|YP_003982250.1| amidase [Achromobacter xylosoxidans A8] gi|310764086|gb|ADP19535.1| amidase family protein 14 [Achromobacter xylosoxidans A8] Length = 475 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 132/470 (28%), Positives = 209/470 (44%), Gaps = 41/470 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+F +R +++S+ ++ ++ IE + + + AY EV A++A A A+ +D+ Sbjct: 6 TALHFQDAQALAGAIRRRELSSRQVTTHFLDRIERAPA-LAAYSEVTAERALAQADAADR 64 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L G+P+ +KD +G+ S L G + QKL G V+LG Sbjct: 65 LLAAGMLLGPLHGVPVAVKDSVQWEGVSVCLGSLALQGRISDATAAPLQKLAAQGMVVLG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K M EFA G S + G +PW D+ PGGSS G+ AVA L ++G DT Sbjct: 125 KTRMTEFAFGLSGQNPTQGTARNPW---DAQTARAPGGSSSGAGVAVAAGLAPLALGGDT 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ G VG KP+ G SR G + + +LD G ITR V D+ +L K +AG D Sbjct: 182 GGSVRAPAALNGLVGFKPSTGVISRDGCLPLSDTLDVLGPITRNVADARLLTKLLAGPDI 241 Query: 241 CDATCVNLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTID---KTWQQGISWLKD 294 D ++ P + +G + V P+ + +P D + W++ L Sbjct: 242 GDPATLDYPASAIAALRQPAARGPGPVAVLAPEAWP----APLADAGLRAWREAEENLAQ 297 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AG P + A A+ +S + Y+ RY + ++E Sbjct: 298 AGYT------PTPWHPPAALSFARMADDNSVVLAYEAYRYYGALAEDPATPLWE------ 345 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V+ RI G R + Y A + R F +A QG+D +L P +A Sbjct: 346 ---VVRKRIASG-----GRITQADYEAALQRRAADMAAFAQAM-QGLDALLMPACDQAAQ 396 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L ++ +G + N G AIS+PA + MP+ +QL+ Sbjct: 397 ALDADDTRHAGLGKLLRP-----ANFLGAAAISLPAGFDTEGMPMAVQLL 441 >gi|209542403|ref|YP_002274632.1| amidohydrolase, AtzE family [Gluconacetobacter diazotrophicus PAl 5] gi|209530080|gb|ACI50017.1| amidohydrolase, AtzE family [Gluconacetobacter diazotrophicus PAl 5] Length = 454 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 124/445 (27%), Positives = 200/445 (44%), Gaps = 65/445 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R +AV V + I AIE ++++N+ + +A A AE+ D+RI G D L G+ Sbjct: 19 IRQGRRNAVSFVTAAIAAIEVRDTRVNSVTRIFGPRAVAEAEKIDRRIAAGEDPGPLAGV 78 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P G+KD F +G T A S +L RP + +TV +L GA+ L LNMDEFA G + Sbjct: 79 PFGVKDLFDVEGEVTTAGSVVLREARPAVQDATVIARLRAAGAIPLASLNMDEFAYGFAT 138 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + ++YG R+ + G S G ++A AGFL ++G+DT GSIR PAS G Sbjct: 139 DNAHYGIT----RNPHDPARLAGGSSGGSAAAVAAGFLP-FTLGSDTNGSIRVPASLCGV 193 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPT+G R G FA SLD G T+ D ++ +A+ G P+P Sbjct: 194 WGLKPTFGTVPREGAYPFAASLDVVGPFAGTLADLRVVHEAMNGA----------PMPAV 243 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 D + + + + + I + + + LP A A Sbjct: 244 PVLSDLRVARLG---------GWFAENVSAPLAAAIDAVAGHLGHVPVVELPEVARARAA 294 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++I+ AE G+ + R+ R++ + + R++ G + ++ Sbjct: 295 SFLITAAEG--------GMLHLPRLR----------RRALQYDPATRDRLIAGALLPAAT 336 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---------GKEENNSG 424 +H RA R I F A DV++ P T A PL G+ + Sbjct: 337 VLQAHRFRA-WFREQIHAAFRTA-----DVLIAPATVGEA-PLIDQPTIVVDGQAVSART 389 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVP 449 ++G ++T +++AG+P +SVP Sbjct: 390 NLG-----LYTQPLSLAGVPILSVP 409 >gi|259048024|ref|ZP_05738425.1| amidase family protein [Granulicatella adiacens ATCC 49175] gi|259035314|gb|EEW36569.1| amidase family protein [Granulicatella adiacens ATCC 49175] Length = 482 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 129/509 (25%), Positives = 240/509 (47%), Gaps = 72/509 (14%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E R+ +R++++S VELV ++ I N ++NA + + A++ A EE+ R G Sbjct: 7 EMREAVRNQEVSPVELVQESLEKIHAFNPELNAVVHIQAER---ALEEAKTRSFEG--LP 61 Query: 71 LEGIPIGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 G+P+ +KD + +C S +L ++L + G +++G+ N EF Sbjct: 62 FGGVPLLLKDLGQNQAGEPSSCGSKLLKDIPMKRTDNFVKRLEEAGFIIVGRTNTPEFGF 121 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + E +GPV +P+ + + G ++ +S V + AAS D GGSIR PAS Sbjct: 122 KNMTEAKLWGPVNNPYDLKRNAGGSSGGAAAAVASGMVQ--IAAAS---DGGGSIRIPAS 176 Query: 190 FTGTVGIKPTYGRCSRLGIISF----APSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 F+G +G+KP+ GR +G S+ S++ A +T++VRD+ LL+A+ ++ D+ Sbjct: 177 FSGLLGLKPSRGRIP-VGPGSYRGWQGASVNFA--MTKSVRDTRELLRALQ-VEQKDSPF 232 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + + ++E L++ ++ VG+ ++ ++ ++P ++ + +L+D G ++ I Sbjct: 233 LAPLIREWEVRLERPLR---VGVIEKSPIESVVAPEAKAALRKAVHFLEDIGCEVEPIGW 289 Query: 305 P-HTQYALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVKHR 362 P + YY+++ E + A G+ L R KD +E+ + G Q +H Sbjct: 290 PVDGVEVMKNYYLMNSVETA---AMMQGLEASLGRALTKDDMELM----TWGIYQSGQH- 341 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-----FPLG 417 I+ Y ++ +D++ K+ E F D+ILTPT A FP+ Sbjct: 342 ILAKDYSVALAKWDTYAHAMEKVH--------EEF----DLILTPTVSDVAPLQTQFPM- 388 Query: 418 KEENNSGSMGHIYN--------------------DVFTVAVNMAGLPAISVPAALCEKKM 457 EE+ ++ I FT N+ G PAIS+P L +K + Sbjct: 389 -EESVRQALNQIEELSVPEQQSVIWRMFDRTLALTPFTQLSNITGAPAISLPVYLSDKGL 447 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGY 486 P+G+Q + +E L V + E++ + Sbjct: 448 PIGVQFMAARGQEALLLQVAEWFEEQGQF 476 >gi|254563032|ref|YP_003070127.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium extorquens DM4] gi|254270310|emb|CAX26306.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium extorquens DM4] Length = 611 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 190/428 (44%), Gaps = 54/428 (12%) Query: 69 RDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+P +KD G+ T AC + P + ++L GA+++GK N+D+F Sbjct: 66 KPLWGVPFAVKDNVDVAGLPTTAACPDF--AYTPQATAPAAERLLAAGAILVGKTNLDQF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + Y PV P ++D PGGSS GS+ AVA L ++GTDT GS R P Sbjct: 124 ATGLVGVRTPY-PV--PKNAIDPA--IVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KP+ G S G++ +LD I TV ++ + + +AGYD D Sbjct: 179 AGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSIFAGTVAEADAVFRVMAGYDPQDPYSRA 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPVP AL G+ VG+P G+ + DA +S Sbjct: 239 LPVPPRPGALP---PGLRVGVPD---------------AAGLIFAGDA------LSAAAF 274 Query: 308 QYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 AL + ++ A A++ +LA + V GL G + E Y+ R GF +E + Sbjct: 275 DGALADLHTVTGAAATAVDLAPFFAV-AGLLYAGPWVAERYQAIR--GFMEERPEALHPT 331 Query: 367 TYVL--SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLG 417 T + ++ + + A R R TEA +G+DV++ PT P +A P+G Sbjct: 332 TRAIIGAATGHSAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRPRRVADLAADPVG 391 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +G +T VN+ L A++VP +P G+ LI + + +G Sbjct: 392 PNSE----LG-----TYTNFVNLLDLCALAVPGRFRADGLPSGVTLIAPRGADGLIAELG 442 Query: 478 QIIEKEAG 485 + AG Sbjct: 443 ARLHAAAG 450 >gi|73538967|ref|YP_299334.1| amidase [Ralstonia eutropha JMP134] gi|72122304|gb|AAZ64490.1| Amidase [Ralstonia eutropha JMP134] Length = 499 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 126/437 (28%), Positives = 195/437 (44%), Gaps = 46/437 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD G+ T A + L G ++ + ++L + GA++L K N+ E A G Sbjct: 83 LHGIPVLVKDNIECAGMETTAGARCLQGNLAVEDAFIVRRLREAGAIVLAKTNLHELASG 142 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ G +P+ D T TPGGSSGG++A +A IGTD SIR PAS Sbjct: 143 GETVSTLGGQTRNPY---DLTR--TPGGSSGGTAAGIAANFGLLGIGTDGVNSIRSPASA 197 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT---CVN 247 VG++PT G SR G+I + D G ITRTV D+A+LL IAGYD D + Sbjct: 198 NNLVGLRPTMGLVSRTGLIPCGLTQDTIGPITRTVTDAALLLDIIAGYDPADPVTGEAAS 257 Query: 248 LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSP---TIDKTWQQGISWLKDAGAKIVEIS 303 P Y L +++G +G+ + + D P ++ Q ++ ++ GA++V+I Sbjct: 258 HTRPSYTEGLHPDALKGARIGVLRSFFGD--GPEHRAVNAVMQNALATIRARGAELVQID 315 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG--FGQEVKH 361 AL A ++ E +L Y L D+ + RS+ H Sbjct: 316 EAIHPDALLADTLVHLYEMKGDLDAY------LADAPSDV-----SVRSMEDIIASASVH 364 Query: 362 RIMIGTY--VLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + GT ++ ++ Y R ++ + L +R +D + P P+G+ Sbjct: 365 PSVAGTLKNAMALAGNETEYRERLQRQQALRERVLGLMAAHRLDALAFPHQRRLVVPVGE 424 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFREET 472 + N V A G PAI +PA E +P+GL+L G+PF E Sbjct: 425 AQAER-------NGVLASAT---GFPAIVIPAGFSEPDAHAAHGVPVGLELFGRPFSEAV 474 Query: 473 LFSVGQIIEKEAGYFRP 489 L + E G RP Sbjct: 475 LLRLAFAAEHAVGARRP 491 >gi|226307354|ref|YP_002767314.1| amidase [Rhodococcus erythropolis PR4] gi|226186471|dbj|BAH34575.1| putative amidase [Rhodococcus erythropolis PR4] Length = 476 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 150/494 (30%), Positives = 229/494 (46%), Gaps = 54/494 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL F V+ +RS +ISA EL ++ ++ IE +S +NA++ V+A + A D+ Sbjct: 10 SELAFAGVAGQAALIRSGEISARELTENTLRRIERLDSTLNAFVRVLADEGLDEATRLDQ 69 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQ----ACSHILDGFRPHYESTVTQKLWDNGA 116 R +G + L G+PI IKD G T A + I +S V ++L + GA Sbjct: 70 RQADGHSLGPLHGVPIAIKDENDVAGTPTTYGGAAATRIASA-----DSEVVRRLREAGA 124 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V++GK M EF + ET+ G +PW + ST SSGGS++AVA + AA+I Sbjct: 125 VIVGKTTMPEFGIWPFTETAANGYTRNPWDTGISTGG-----SSGGSASAVASGMVAAAI 179 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G D GGSIR P++F G G+KP GR S + L G +TR+V DSA++ I Sbjct: 180 GGDGGGSIRLPSAFCGLFGLKPQRGRVSTAPNRNLWRGLGTLGPLTRSVEDSALVYDVIT 239 Query: 237 GYDECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLK 293 G D DY L S P R+ SP + Sbjct: 240 GTTGID---------DYTAETLRASFAESAASAPGPLRIAVSTRSPVRGVRPSPEVVAAV 290 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR-YDGVR-YGLRVEGKDILEMYENTR 351 + A+++ H + P Y P ++ L + GVR LRV+ +LE + TR Sbjct: 291 HSIAEMLSALGHHVEEHDPEY----PDATAAFLPQVLGGVRDEALRVDHPALLE--KRTR 344 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ IG +R Y + +I + + F + F D++L PTTP Sbjct: 345 ALA---------SIGRVAAPARVGKFAYRKGERIAATVNQVF-DTF----DLVLMPTTPA 390 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAV----NMAGLPAISVPAALCEKKMPLGLQLIGQP 467 P+G+ E +G + + + A N+ G PA +VPA E+ +PL +QL+G+ Sbjct: 391 LPRPIGQLE-GTGLLSAVRKALPIAAYCSIWNVCGNPAAAVPAGFSERGLPLSVQLVGRS 449 Query: 468 FREETLFSVGQIIE 481 E T+ +V Q +E Sbjct: 450 GGEPTILAVAQQLE 463 >gi|86136930|ref|ZP_01055508.1| amidase family protein [Roseobacter sp. MED193] gi|85826254|gb|EAQ46451.1| amidase family protein [Roseobacter sp. MED193] Length = 446 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 132/474 (27%), Positives = 216/474 (45%), Gaps = 58/474 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 + +++I V L Y+ AI+ + Y EV ++A A A + +R G R L+G+ Sbjct: 18 IAAQEIDPVALAQCYLAAIDAHAHRDLIYSEVTHERALAEATAAAERARMGLRRSPLDGV 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 P+ KD F + G T+A SH+L G P ++ V + GAV LGK +M E A Sbjct: 78 PVSWKDLFDSAGAKTEAGSHLLKGRVPDQDALVLEIATSMGAVCLGKTHMSELAFSGLGL 137 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N + P ++ + PGGSS G++A+VA L +IG+DTGGS+R P+++ Sbjct: 138 NPVTATPPCVN-------DEAAVPGGSSSGAAASVAFDLAPMAIGSDTGGSVRIPSAWND 190 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+K T GR S G++ D G + R+V D+ ++L + G + PD Sbjct: 191 LVGLKTTAGRVSLEGVVPLCLKFDTVGPLVRSVEDAGLVLGLLEGTEG----------PD 240 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 A S++G + D L P + +++ + + L++AGA+IV + +P A+ Sbjct: 241 LRGA--GSLKGRRFADLQSIAQDELDPVVAQSYAEALQKLQEAGAEIVPLEVPELSEAMG 298 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 I+ EA YGL E+ E + + F ++ R G S Sbjct: 299 LSAILFTTEA-----------YGLWK------EVIEASPDVMF-DKILERFRSGAQ-FSG 339 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQ---GVDVILTPTTPTSAFPLGK--EENNSGSMG 427 Y + + R + R A++Q G D +L+PT P L + +E + Sbjct: 340 ADYVAAWGRLEQARM--------AWDQATVGFDAVLSPTCPILPPNLARLQQEEDYYVQA 391 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ T N+ G +S+P GLQ++GQP EE L +G +E Sbjct: 392 NLLTLRNTRIGNLMGTCGLSLPTG----TPSCGLQMLGQPDCEEALLRLGVGVE 441 >gi|332528642|ref|ZP_08404624.1| biuret hydrolase [Hylemonella gracilis ATCC 19624] gi|332041958|gb|EGI78302.1| biuret hydrolase [Hylemonella gracilis ATCC 19624] Length = 466 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 126/473 (26%), Positives = 204/473 (43%), Gaps = 50/473 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIK 79 +SA E + I IE ++ ++NA+ ++AR A + D R G+ L G+P +K Sbjct: 20 LSAAEALGQAIARIEATDGRVNAFTARTFERARREAADVDARRARGERLPPLAGVPYAVK 79 Query: 80 DCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 + F +G T A S I D ++ + Q++ D GAV++G LNMDE+A G + E S+ Sbjct: 80 NLFDIEGEVTLAGSKINRDDPPARADAVLVQRMRDAGAVLVGALNMDEYAYGFTTENSHQ 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +P S + G + ++ V ++G+DT GSIR P+S G G+KP Sbjct: 140 GPTRNPHDLSRSAGGSSGGSGAAIAAGQV-----NITLGSDTNGSIRVPSSLCGVWGLKP 194 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T+GR SR G F S+D G +V A+ A+ D D C V L Sbjct: 195 TFGRLSRRGSYPFVHSIDHLGPFADSVEGLALSYDALQYPDPQDPGCHARAVQAVLPTLA 254 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 Q + G+ VG+ Y D + + A ++ P A A +I++ Sbjct: 255 QGVAGLRVGVLGGYFEDLATAPARAA----VLAAARALDAREQVLWPDAAEARAAAFIVT 310 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 +E S D +R R + + L + R + G L + + Sbjct: 311 ASEGGS--LHLDHLRQ--RADEAEPLSV--------------DRFIAGA--LQPAAWMTR 350 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--------SGSMGHIY 430 R R+ + RD A DV+L P TP +A +G E S+G Sbjct: 351 AQRFRR----VYRDKVNALFAQWDVLLAPATPIAAPVIGTEWIEIQGERLPCRPSLG--- 403 Query: 431 NDVFTVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 + T V+ AG P ++ P + +P+G+Q+I P+RE+ +++ Sbjct: 404 --LLTQPVSFAGCPVVAAPLWPGGEAGPLPIGVQIIAAPWREDLALRAAHVLQ 454 >gi|42524126|ref|NP_969506.1| putative amidase [Bdellovibrio bacteriovorus HD100] gi|39576334|emb|CAE80499.1| putative amidase [Bdellovibrio bacteriovorus HD100] Length = 489 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 125/516 (24%), Positives = 218/516 (42%), Gaps = 54/516 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ + ++++K++S E+++++I IE N +NA +E +AR A E Sbjct: 1 MNELLKLSALDLHKKVQTKEVSPSEVLEAHITRIEQVNPALNAMVEDDFVRARKLAHEQT 60 Query: 61 KRII--NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + N D L G+P +K+ F+ +G+ S +++TV ++ G + Sbjct: 61 ETLAKNNSDLPPLFGVPFTVKEMFSYQGMKRTGGSIHHKNDVMDWDATVVARMKKAGGIP 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +G N+ E YG +P+ T GGSSGG A + +G+ Sbjct: 121 MGTTNVPELGFWFECFNPVYGRTSNPYDLGR-----TCGGSSGGEGALIGAGASPLGLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS------LDQA------GIITRTVR 226 D GGSIR PASF G G KP+ G F + LDQ G +TR Sbjct: 176 DIGGSIRMPASFCGVFGHKPSRYLLPLTGHFPFEQNDFRTLLLDQKYPYTSMGPMTRKAV 235 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 D A ++K + G D+ D + P + L Q +G V I T D+ Q Sbjct: 236 DLAPMMKILMGSDDIDQHTLKNPTME---ELSQEWKGRKVLICPNPVFHRARGTDDEMVQ 292 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYI------ISPAEASSNLARYD---GVRYGLR 337 +K+ G E+ H + P +++ + + S N Y+ G L Sbjct: 293 V----VKNCGKLFEELGA-HVEELDPRFFVRSAELWFAAVKNSKNRNLYETLMGPTQHLS 347 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 + GK+IL++ + G G +++ + +R D + + +K D E Sbjct: 348 I-GKEILQL-----TFGKGNYTLPNLLVSLAEIFDTRKKD--FTEEMQALAKMKSDLDEK 399 Query: 397 FEQGVD-VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 G D +++ P P A + + ++ ++T G PA SVP L E Sbjct: 400 L--GADGILILPPHPRVA------PKHRAPLWSPFDFIYTAIFTTLGHPATSVPMGLNED 451 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +PLG+Q++G ++ + + +E G ++P K Sbjct: 452 GIPLGVQVVGPYMKDHLTLACAEFLETTFGGWQPPK 487 >gi|284929427|ref|YP_003421949.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [cyanobacterium UCYN-A] gi|284809871|gb|ADB95568.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [cyanobacterium UCYN-A] Length = 471 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 134/499 (26%), Positives = 217/499 (43%), Gaps = 59/499 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F E + ++ I+ ++L +++ IE N ++ ++ + A AE K+ Sbjct: 7 DLAFTPALELAKLILNRQITPLDLTKLFLERIEKYNPKLGSFFFIAKSDALRDAEIKTKK 66 Query: 63 IINGDARD----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 + + D G+PIGIKD + + L+ Y+ VT++L G V+ Sbjct: 67 LSSISKLDYLPPFFGVPIGIKDLNSVANMPLTYGVAALENNIATYDDEVTKRLKHAGFVI 126 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 LGK + E + P +PW ++D +T GGSSGGS+AAVA +C + G+ Sbjct: 127 LGKTATSQLGSFPYTEPPGFLPSRNPW-NLD----YTSGGSSGGSAAAVASGMCPIAQGS 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR PAS G VGIKP+ GR S + + + G I RTV D+A LL ++GY Sbjct: 182 DGGGSIRGPASCCGLVGIKPSRGRVSNAPVGDYQSGISSNGPIARTVSDAAALLDVMSGY 241 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP------TIDKTWQQGISWL 292 + D + P + A Q+ + + + D++ P I +T ++ L Sbjct: 242 TKGDPYWLPTPETSFLEATKQTTEPLVIAFS-----DHIPPFPETELIIKRTVRETALLL 296 Query: 293 KDAGAKIVEISLPHTQYALPAYYII--SPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 + G VE P + + + II S EA+ GL L ++ Sbjct: 297 ESLGHH-VEEKCPSVEALIDPFKIIWQSGVEAA-----------GLPSNILSPLNIWLQQ 344 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 ++ G+ YL+A + R F+ D+++ P Sbjct: 345 HTVTAGK---------------------YLQAVHEIQVFSRKLVSFFDT-FDILVLPIYL 382 Query: 411 TSAFPLGKEE--NNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +G+ ++ I N + A N +GLPAIS+P K +P+G+QLIG+P Sbjct: 383 HQPIKIGEWSALPPEKTLNKIINWISPCPAFNASGLPAISLPMGYDNKGLPIGVQLIGKP 442 Query: 468 FREETLFSVGQIIEKEAGY 486 E TL V +EK Y Sbjct: 443 ADEITLIRVAAQLEKINNY 461 >gi|227830345|ref|YP_002832125.1| Amidase [Sulfolobus islandicus L.S.2.15] gi|227456793|gb|ACP35480.1| Amidase [Sulfolobus islandicus L.S.2.15] Length = 397 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 138/467 (29%), Positives = 202/467 (43%), Gaps = 89/467 (19%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 +E NS+ NA+I + EE+DK G +D + GIKD TKGI T A S Sbjct: 3 LEELNSKYNAFITL------HNIEENDK----GKLKD---VTFGIKDVILTKGIRTTAGS 49 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 IL+ + P + V + G ++GK N EFA+G++N +S GP +P + Sbjct: 50 RILENYVPQKNAYVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVDP-----E 104 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSSGGS+ AV + IGTDTGGS+R P+S G +G KPT G G+I F+ Sbjct: 105 RISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSW 164 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLD GII V+D+ LL+ + DA N + V I K Sbjct: 165 SLDTVGII---VKDNIGLLRRV-----FDAILPN--------------EKKKVEIAKLRT 202 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAK------IVEISLPHT-QYALPAYYIISPAEASS-- 324 L + + LK+ AK IVE+ LP QY IS AEASS Sbjct: 203 RPRLGLFLFDEMEVSRILLKEIYAKLSSYFDIVEVDLPLLRQYGSKTRRTISLAEASSYH 262 Query: 325 ------NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 N +Y Y L ++G I + Sbjct: 263 KDWITENSNKYFKDTYTLLLDGMKI-------------------------------SATD 291 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 Y+ A + R ++ ++ + F + +D IL+PTT A + +N Y T Sbjct: 292 YIDAIRYRRVLIEEYIKLF-KNIDFILSPTTKIVAPKISDVLSNPLQFRE-YLIANTELF 349 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ G P+IS+P + ++P+GL + G+ +++ L V + I G Sbjct: 350 NVVGAPSISIPFSTLN-ELPVGLMISGELYKDGDLLEVTEYILNVVG 395 >gi|113869028|ref|YP_727517.1| amidotransferase subunit A [Ralstonia eutropha H16] gi|113527804|emb|CAJ94149.1| amidotransferase subunit A [Ralstonia eutropha H16] Length = 464 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 126/474 (26%), Positives = 199/474 (41%), Gaps = 42/474 (8%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R+ + + E+V ++ I N Q+NA E + A + R+ G+ L G+ Sbjct: 15 RVAAGRLDPAEVVAAFQARIAARNDQLNAVFEQRQELVDADLAQLRARLAQGERPLLAGV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD ++G S + F ++ ++L GA++LG N EFA Sbjct: 75 PVIVKDVIWSQGRRVTQGSQLYRDFIAPADAIAVERLRQAGAIVLGMGNTSEFACKGLTT 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG P +D+T T GGSSGG + AVA + ++GTD GGS R+P + G V Sbjct: 135 NKVYGLTRHP---LDAT--LTAGGSSGGCAVAVAAGMAPLALGTDGGGSSRRPPAHAGVV 189 Query: 195 GIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G KP+YG +G + ITRTV D+ ++ +A+AG D D + Sbjct: 190 GFKPSYGAIPDSVGFPHAFNGIQVIAPITRTVADAELMFEALAGADPRDPDTLGF----- 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKDAGAKIVEISLPHTQYA 310 +L + T+ I RL +P D + ++Q ++ L+ AG I + A Sbjct: 245 --SLGAARPLHTLKIAVSPRLGLDTPVDDDVAQAFEQAVARLQGAGLTIERADPAWPKGA 302 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A + +NL YG E + + F +V +I G Sbjct: 303 DEAALMPLQHVGLANL-------YG---------EAWRRDPEL-FDPDVARQIERGLA-- 343 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF---PLGKEENNSGSMG 427 + RAR+ I F + D++L PTTP A+ LG E ++ Sbjct: 344 ---WSGADVARAREASHQIALAVAGFFTR-YDLLLCPTTPCVAWRNDRLGPERIGGVAVE 399 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + VFT N A PAISVP +P GLQ+ G + + + ++ E Sbjct: 400 PRAHAVFTPFFNHALAPAISVPCGHGRDGLPAGLQIAGPRGADRNVLAAARLAE 453 >gi|209883263|ref|YP_002287120.1| peptide amidase [Oligotropha carboxidovorans OM5] gi|209871459|gb|ACI91255.1| peptide amidase [Oligotropha carboxidovorans OM5] Length = 517 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 127/500 (25%), Positives = 221/500 (44%), Gaps = 38/500 (7%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKRII 64 +++ + +++K+ + +VD Y+ IE N + +NA I + + AA++ ++ Sbjct: 29 SIASIHNAIQTKETTCAAIVDQYLARIEAYNKKGPALNAVITINPKARDIAAKQDEEFAK 88 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L IP+ +KD + T + T + + P ES VT +L GA++L K N+ Sbjct: 89 TGKLAPLACIPVAVKDNYNTTDLPTTGGNLLFKDTIPSQESAVTSRLRAAGAIILMKTNL 148 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA+ + +S G ++P+ D T GSSGG+ AAVA A +GTDT SI Sbjct: 149 HEFALSGTTVSSLGGQTLNPY---DLTRTPG--GSSGGTGAAVAANFAAVGLGTDTVNSI 203 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-- 242 R P+S VG + T G SR +I + + D G I R+V D A +L + GYD D Sbjct: 204 RSPSSANSLVGFRTTKGLVSRAHVIPVSSTQDVVGPIARSVSDVAAMLDVLVGYDPADPV 263 Query: 243 -ATCVNLPVPDYERALDQS-IQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAGAKI 299 A + Y AL+ + ++G +G+ K + + + + + + + K AGA + Sbjct: 264 TARAIGHIPSSYTEALNAAGLKGARIGVLKSFVGKEPIHAEVTAAFDKAVEAFKAAGATV 323 Query: 300 VEISLPHTQYALPAY---YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 VEI + + + Y + E Y G R K + ++ + + + Sbjct: 324 VEID--DSFFDAGTFNRDYDVQKWEFKPLFNAYLA-SLGDRAPVKSLTDLIASGQ---YD 377 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 ++ + + + + + + YL R K+ L R + +D ++ P P Sbjct: 378 KQTLEKFLTASNAIENPGQEKDYLARLAKLDDLRDRLLNHMAKNELDAVIYPEQMRLVVP 437 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------KMPLGLQLIGQPFR 469 + E N + G + + G PAI+VP + +P+GL +IG+PF Sbjct: 438 I-TETNQADRTG--------ILAALTGFPAITVPMGFSKPGQNAPIGVPIGLDMIGRPFT 488 Query: 470 EETLFSVGQIIEKEAGYFRP 489 E L E+ RP Sbjct: 489 EPLLIKYAYAFEQATKARRP 508 >gi|163842852|ref|YP_001627256.1| amidase [Brucella suis ATCC 23445] gi|163673575|gb|ABY37686.1| Indoleacetamide hydrolase [Brucella suis ATCC 23445] Length = 445 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 185/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R P + Sbjct: 113 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPVA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 168 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 225 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 226 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 274 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 275 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 326 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 361 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 362 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 419 Query: 475 SVGQIIEK 482 + IEK Sbjct: 420 AAALSIEK 427 >gi|77460525|ref|YP_350032.1| amidase [Pseudomonas fluorescens Pf0-1] gi|77384528|gb|ABA76041.1| putative amidase [Pseudomonas fluorescens Pf0-1] Length = 505 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 217/511 (42%), Gaps = 71/511 (13%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESD 60 L + + SE + S ++++V LV I I + + Q +NA IE+ Q A + Sbjct: 34 LEYASASELSAMMASNELTSVALVQHLITRIADLDKQGPTLNAIIEINPQALDIATALDE 93 Query: 61 KRIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R L GIP+ +KD F T + T A S + G ++ ++L D GA++L Sbjct: 94 ERAQGNLRGPLHGIPVLLKDNFDTADSMQTGAGSLAMIGQPAAQDAFTVKQLRDAGAILL 153 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA----- 174 GK NM E+ S R + ++ G G + ++ C + Sbjct: 154 GKANMSEW---------------SGMRDLSLPLGWSGRGGQGKNPHVLSESTCGSSSGSA 198 Query: 175 ----------SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 ++GT+T GSI PAS G VG+KP+ G SR GI+ D G +TRT Sbjct: 199 AAVAAGLSPLAMGTETNGSISCPASANGVVGVKPSLGLFSRAGIVPITRLQDTPGTMTRT 258 Query: 225 VRDSAILLKAIAGYDECDATCVNLPV-PDYERAL-DQSIQGMTVGIPKEYRLDY---LSP 279 VRD+A+L I G D D+ + P DY L +++QG +G P Y + L+P Sbjct: 259 VRDAALLFNVIQGVDASDSATADAPTGVDYTALLSSEALQGKRIGYPIAYTGSHATVLNP 318 Query: 280 TIDKTWQQGISWLKDAGAKIVEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 +++ ++ L++ GA +V ++ LP + Y L Y R GL Sbjct: 319 SLEML--AAMATLEEQGATLVPLTVRLPD----IDDYVNGLMGAMKHELPEYLASRQGLP 372 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 V D L+ + G+E + + T S+ + A + T I ++F +A Sbjct: 373 V---DSLQALIDFNLANPGEEQHGQQTLETINASALSHQ----EASALITTISQNFKDAI 425 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 ++ V E+N ++ + + AG PAI++P+ + + Sbjct: 426 DEQV-----------------REHNLDALFAEADGFSQFSAATAGYPAITLPSGMNDDAT 468 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 P + GQ + E LF++ E+ + R Sbjct: 469 PTSVTFYGQQWSEPQLFAMAYSYEQASMELR 499 >gi|195037657|ref|XP_001990277.1| GH18322 [Drosophila grimshawi] gi|193894473|gb|EDV93339.1| GH18322 [Drosophila grimshawi] Length = 535 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 135/506 (26%), Positives = 221/506 (43%), Gaps = 51/506 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN- 65 ++ E R +LRS+ ++AVELV YI+ I+ NSQ+NA +E + A A DKRI Sbjct: 50 LSAQELRTQLRSRQLTAVELVTVYIERIKAVNSQLNAVVEDRFEAALLEAAAVDKRIAAA 109 Query: 66 GDA------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 GD + L G+P+ +K+ A G+ S R + ++ GA+ L Sbjct: 110 GDVEQLFERQPLLGLPVTVKESCALAGMSFAVGSLARSKMRADSDGAAVGRVRAAGAIPL 169 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+ +T G +P+ K TPGGSSGG A IG+D Sbjct: 170 LVSATPEYCFSIDTDTLLNGRCRNPY-----DLKRTPGGSSGGEGALNGAGASLFGIGSD 224 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-----GIITRTVRDSAILLKA 234 GGSIR P+ F G G KPT G S G + D A G ITR D A+LL+ Sbjct: 225 IGGSIRIPSLFCGVFGHKPTGGVVSVAGHFPNSDDADFANYLVLGPITRFAVDLALLLEV 284 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 +AG +A+ ++L P + + + + R+ + T+D+ ++ ++D Sbjct: 285 MAGE---NASQLHLHDPQPQLGKLRVLFSTAGFVGLNGRMHH---TVDRDIKR---RMRD 335 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRS 352 A + +V I L + LPA + S A S++AR + Y L +G + + RS Sbjct: 336 ALSYLVSIGLQVKRAQLPAGFNNSMEIAMSSIARLQQMPYALGEPTKGSVCETLVQVMRS 395 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYD-----SHYLRARKIRTLIKRDFTEAFE----QGVDV 403 + + + + ++ +D ++ +++ K T A E G D Sbjct: 396 L---------LKLSNHTTNALIFDLLRRAKAFMPGQRLEYYQKEAQTLAVELTQMLGEDG 446 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +L T +A PL + S ++ T+ N+ G+P VP +P+G + Sbjct: 447 VLIFPTMHAAAPL-----HGWSSLQMWGVDLTLIFNVLGMPVTHVPMGRNRLGLPIGFSV 501 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 I PF++ + +E+E G +RP Sbjct: 502 IAAPFQDRLCLRIAVEMEREFGGWRP 527 >gi|240140543|ref|YP_002965023.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium extorquens AM1] gi|240010520|gb|ACS41746.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium extorquens AM1] Length = 611 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 119/427 (27%), Positives = 183/427 (42%), Gaps = 52/427 (12%) Query: 69 RDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+P +KD G+ T AC + P + ++L GA+++GK N+D+F Sbjct: 66 KPLWGVPFAVKDNVDIAGLPTTAACPDF--AYTPQATAPAVERLLAAGAILVGKTNLDQF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + Y PV P ++D PGGSS GS+ AVA L ++GTDT GS R P Sbjct: 124 ATGLVGVRTPY-PV--PKNAIDPA--IVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KP+ G S G++ +LD + TV ++ ++ + +AGYD D Sbjct: 179 AGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRVMAGYDPQDPYSRA 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPVP AL G+ VG+P L + + G D Sbjct: 239 LPVPPRPGALP---PGLRVGVPDAASLIFAGDALSANAFDGALADLDT------------ 283 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +I A + +LA + V GL G + E Y+ R GF +E + T Sbjct: 284 --------VIGGAAVTVDLAPFFAV-AGLLYAGPWVAERYQAIR--GFIEEHPEALHPTT 332 Query: 368 YVL--SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLGK 418 + ++ + + A R R TEA +G+DV++ PT P +A P+G Sbjct: 333 RAIIGAATGHSAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRPRRVADLAADPVGP 392 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +G +T VN+ L A++VP P G+ LI + + +G Sbjct: 393 NSE----LG-----TYTNFVNLLDLCALAVPGRFRADGFPSGVTLIAPRGADGLIAELGA 443 Query: 479 IIEKEAG 485 + AG Sbjct: 444 CLHAAAG 450 >gi|251797091|ref|YP_003011822.1| amidase [Paenibacillus sp. JDR-2] gi|247544717|gb|ACT01736.1| Amidase [Paenibacillus sp. JDR-2] Length = 494 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 154/505 (30%), Positives = 221/505 (43%), Gaps = 69/505 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 + + ++++ V Y++ IE N + A +EV A E +R+ G L GIP Sbjct: 21 MEAGELTSEACVRWYLERIERINPTLRAVLEVNPDAISIARELDKERMELGARGPLHGIP 80 Query: 76 IGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--MGSS 132 I +KD T +HT A S L +S V +L +GAV+LGK NM E+A M S Sbjct: 81 ILLKDNIDTGDRMHTSAGSVALAEHFAPADSAVAGQLKASGAVILGKANMTEWANFMSGS 140 Query: 133 NETSYYGPVISPWRSMDSTDKFTPG-----GSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 Y R + + + PG GSS GS +AVA LCAA+IGT+T GSI P Sbjct: 141 MWAGYSS------RGGLTLNPYGPGELFVGGSSSGSGSAVAANLCAAAIGTETSGSIISP 194 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 +S G VG+KPT G SR GII S D AG +TRTV+D+AILL A+ D D+ + Sbjct: 195 SSQNGIVGMKPTIGLVSRRGIIPITHSQDSAGPMTRTVKDAAILLGAMTALDPADSAMHD 254 Query: 248 L---PVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + DY LD +QG +GIP+ Y QG L +A A+I+E + Sbjct: 255 VGRTAHSDYASFLDVNGLQGARIGIPRHY-------------YQG---LDEARAEIIERA 298 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDG--VRYGLRVEGKDILEMYENTRSIGFGQEV-- 359 + A I+ P A++D +RY + D L N I E+ Sbjct: 299 I--VLCAELGAVIVDPVTMPCENAKWDWDVMRYEFKKGLNDYLATAGNGAYIRTLDELIE 356 Query: 360 ---KHR---IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 HR + G VL S L + ++ + A +QG+D ++ + Sbjct: 357 YNEAHRDTALKYGQNVLIWSNETSGTLTEPEYLESLRLNHETARKQGIDHVIDSHKLDAL 416 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE----------KKMPLGLQL 463 LG E D ++ AG PAI+VP E K P G+ Sbjct: 417 LFLGNE------------DGLDISAR-AGYPAITVPGGYAETGIIAEGGYTTKGPQGITF 463 Query: 464 IGQPFREETLFSVGQIIEKEAGYFR 488 +G + E L + E+ + Y R Sbjct: 464 VGAAYSEPVLLKLAYAYEQASKYRR 488 >gi|312795425|ref|YP_004028347.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Burkholderia rhizoxinica HKI 454] gi|312167200|emb|CBW74203.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) [Burkholderia rhizoxinica HKI 454] Length = 471 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 125/472 (26%), Positives = 205/472 (43%), Gaps = 47/472 (9%) Query: 25 ELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCF 82 ELV++ ++ I + Q + +I+V AQ AR A+ DK G L G+P+ IKD F Sbjct: 39 ELVETTLERIAAPHGQGRSVFIQVHAQAARQCADALDKLRAAGTVLSPLMGVPVSIKDLF 98 Query: 83 ATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G T+A S +L P +++ +L GAV++G+ NM EFA +YG Sbjct: 99 DIAGQVTRAGSVVLSDAPPARTDASTVARLQQAGAVIIGRTNMTEFAFSGLGLNPHYGTP 158 Query: 142 ISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 SPW R+ D ++ GGSS G++A VA + A +GTDTGGS+R PA+ G G KPT Sbjct: 159 ASPWQRTADDAERRIAGGSSSGAAACVADGMAAVGLGTDTGGSVRIPAALCGLTGFKPTA 218 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 R G++ + SLD G I +V A+ + +AG PV R Sbjct: 219 RRIPTDGVLPLSSSLDSVGPIGSSVACCALTDRILAGLP---------PVVPPAR----P 265 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 I+G+ +G LD + ++ + + + L AGA++ E+ +P Sbjct: 266 IEGVRLGALTHLMLDDMDLSVARAYDDALQHLSAAGARVSELRF-------------APL 312 Query: 321 EASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 E +++ R + + ++E R+ + V RI G + ++ + Sbjct: 313 ERLAHINRLNLPSIESFAWHRKLIE----NRASDYDPRVLARIRKGEHASAADYIELLRE 368 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVAV 438 RA I E D I+ PT P + + + + + + + Sbjct: 369 RADIIAQ------AEPLWHSFDAIVCPTVPIEPPRIAELQADDAVYARVNATILRNPSLI 422 Query: 439 NMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 N A+S+P C + + P+GL L R+ L +G+ +E R Sbjct: 423 NYLDGCALSLP---CSRHGEAPVGLMLASGTGRDTALLMLGRAVEAVLAPLR 471 >gi|89257522|gb|ABD65012.1| amidase, putative [Brassica oleracea] Length = 522 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 135/518 (26%), Positives = 226/518 (43%), Gaps = 96/518 (18%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGD 67 V + R + K +++ +LV+ Y++AI N ++A IE A AE +DK R + G Sbjct: 65 VDDIRVAFKEKRLTSKQLVEYYLKAISKLNPTLHAVIET-NPDALVDAEMADKERQLKGV 123 Query: 68 AR--DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + L GIP+ +KD +TK ++T A S L G ++ V ++L +GAV+LGK ++ Sbjct: 124 TKLPMLHGIPVLLKDNISTKDKLNTTAGSFALLGSVVPRDAGVVKRLRRSGAVILGKASL 183 Query: 125 DEFAMGSSNETSYYGPVISPW--RSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGT 178 E+A ++ + + W R + + + P GSS GS+ +VA L A S+GT Sbjct: 184 SEWA-------NFRSSIPNGWSARGLQGKNPYVLSADPLGSSSGSAISVAANLVAVSLGT 236 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI P+S VGIKP+ G SR G++ + D G I R V DS +L AI GY Sbjct: 237 ETDGSILAPSSQNSVVGIKPSVGLTSRAGVVPISLRQDSVGPICRRVSDSVHVLDAIVGY 296 Query: 239 DECDATCVN----LPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D D +P Y++ L + ++G +G+ LD+ I L+ Sbjct: 297 DPLDEATRTASKYIPKGGYKQFLRANGLKGKRLGVVFGSLLDH-----------DIKTLR 345 Query: 294 DAGAKIVE-ISLPHT------------QYALPAY---YIISPAEASSNLARYDGVRYGLR 337 GA ++E +++P++ + +L AY + SP + +++ ++ Sbjct: 346 QEGAIVIENLTIPYSDSGEMTALLAEFKISLNAYLKALVKSPVRSLADVIAFNKKFAKKE 405 Query: 338 VE---GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 G+++ E T +G ++ R M I L+K Sbjct: 406 KVKEWGQEVFLEAEATNGMGDKEKEALRTM-------------EEFSRNGIEKLMK---- 448 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 E +D I+T G++ + V V G P I+VPA Sbjct: 449 ---ENKLDAIVT-------------------YGYMLSSVLAV----GGYPGITVPAGYDS 482 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 + +P G+ G F E L + E+ +P K+ Sbjct: 483 EGVPFGISFGGLRFSEPKLIEIAYGFEQATLIRKPPKF 520 >gi|315647825|ref|ZP_07900926.1| Amidase [Paenibacillus vortex V453] gi|315276471|gb|EFU39814.1| Amidase [Paenibacillus vortex V453] Length = 496 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 149/506 (29%), Positives = 221/506 (43%), Gaps = 69/506 (13%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 +S+ +D L+ I++VELV Y++ IE + Q+++ +EV + A + +R + Sbjct: 12 ISDMQDALKQGWITSVELVQLYLERIELYDGQLHSILEVNPDALQIAKDLDQERSVKKVR 71 Query: 69 RDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ +KD T +HT A S L +S V +KL GAV+LGK NM E+ Sbjct: 72 GMLHGIPVLLKDNIDTGDKLHTSAGSISLADSYAAKDSFVAEKLRQAGAVILGKTNMTEW 131 Query: 128 A--MGSSNETSYYGPVISPWRSMDSTDKFTPG-----GSSGGSSAAVAGFLCAASIGTDT 180 A M +S Y R + + + PG GSS GS AAVA L AA+IGT+T Sbjct: 132 ANFMSASMWAGYSS------RKGLTLNPYGPGELFIGGSSSGSGAAVAANLAAAAIGTET 185 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI P+S VGIKPT G SR GII + D AG + RTV D+AILL AI G D+ Sbjct: 186 SGSIISPSSQNSLVGIKPTMGLVSRSGIIPITYTQDTAGPMARTVADAAILLGAITGADD 245 Query: 241 CDATCVNLP---VPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D P + DY LD ++ +GIP+ Y +D + I L++ G Sbjct: 246 QDEATNIDPQHRIKDYTEFLDAGYLKQARIGIPRHYYKHLDRDRLDIV-ESAIQVLREQG 304 Query: 297 AKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLRVEGKDILEMYENTRSI 353 A I++ + LP + +N+ RY+ +Y V L ++ I Sbjct: 305 AVIIDPVDLP-----------CQNTKWDANVLRYEFKKYVNDYLVNVDSSLPVHSLADVI 353 Query: 354 GFGQEVKHR-------IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 + + R +I S + YL +R +++ A +G+D +L Sbjct: 354 AYNEAHADRAQKYGQGTLIWAEETSGTLTEQEYLESR------QKNREMAGTRGIDQVLQ 407 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK----------K 456 + LG E AG P+I+VP E K Sbjct: 408 EFQLDALLFLGNEYGPD-------------LAARAGYPSITVPGGYAENGVIAPGGYMTK 454 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEK 482 P G+ IG + E L + E+ Sbjct: 455 GPQGITFIGTAYSEPVLIKLAYGFEQ 480 >gi|332143325|ref|YP_004429063.1| amidase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553347|gb|AEB00066.1| amidase [Alteromonas macleodii str. 'Deep ecotype'] Length = 544 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 133/496 (26%), Positives = 235/496 (47%), Gaps = 48/496 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 + S +I++ LV Y+ IE + ++N+ + V A A DK++ NG L GI Sbjct: 47 IASGEITSAALVKGYLARIEQLDGKVNSVLSV-NPNALEEANAIDKQLANGKTLGPLAGI 105 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD + + T A S L + + KL GA++LGK N+ E+A S Sbjct: 106 PVLLKDNIESDELPTTAGSMALLNNNTGRNAPIVAKLKAAGAIVLGKTNLSEWANFRSES 165 Query: 135 TSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + IS W ++ + + GSS GS AA++ L + ++GT+T GSI PA Sbjct: 166 S------ISGWSAVGGLTRNPHMLSRSACGSSSGSGAAMSLRLASLAVGTETNGSIICPA 219 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN- 247 S G VG KPT G SR I+ + S D AG +T +V+D+ ++ +AG D+ D+ N Sbjct: 220 SINGVVGFKPTVGLLSRTHIVPISLSQDTAGPMTSSVQDAWLMASVMAGADKNDSATKNA 279 Query: 248 ----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI- 302 L +P L ++G +G+ + + D +P + +++ + L+ +GA +V+I Sbjct: 280 DDYLLEIPS-SSLLATDLKGKRIGVVRYRQGD--NPHVLAVYEKALKQLEASGATLVDIS 336 Query: 303 --SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-----F 355 S P + +A ++S S N + + K++ E+ E ++ F Sbjct: 337 DFSQPDSFWADSYNVLLSEFHHSINEYLSNSPA---SLPAKNLSELIEFNQATPRELALF 393 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--EQGVDVILTPTTPTSA 413 Q++ + + + + S D + R IR + +A + VDV++ P+ S Sbjct: 394 DQDIFEKSLASSAIDS----DEYKHALRLIRDTAGENGIDALLSKHNVDVLVAPSNSPSF 449 Query: 414 FPLGKEENNS--GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 G ++S G +G Y +AG P ++VPA K +P+G+ IG ++++ Sbjct: 450 LIDGVYGDHSPVGFIGIGY------LAAIAGYPHLTVPAGQV-KDLPVGISFIGGKWQDK 502 Query: 472 TLFSVGQIIEKEAGYF 487 + +G I E + G+F Sbjct: 503 KVLEIGSIFEAKHGFF 518 >gi|219887657|gb|ACL54203.1| unknown [Zea mays] Length = 424 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 111/382 (29%), Positives = 182/382 (47%), Gaps = 47/382 (12%) Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GAVM GK NM E G+S ++G +P+ + + + G S G ++A AG LC Sbjct: 62 GAVMAGKANMHELGAGTSGINPHHGATRNPY----NVGRVSGGSSGGSAAAVCAG-LCPV 116 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 ++G D GGS+R PA+ G VG KPT GR S G++ ++ GI+ TV D+ I A Sbjct: 117 ALGADGGGSVRMPAALCGVVGFKPTAGRLSNSGLLPLNWTVGMPGILAATVEDTLIAYAA 176 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL------SPTIDKTWQQG 288 IA + P P + L+ + T +P Y S I + Sbjct: 177 IADQSK--------PSPLQQPELNLPMLTRTRSMPSIRLAKYAKWFDDSSEDIRSLCGKA 228 Query: 289 ISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + L+ G + V++++P + A+Y+ +E +++LA +Y ++ D E+ Sbjct: 229 LQMLRTHYGWESVDVTVPEIEEMRLAHYVTMGSECTASLA----AKY---LDSMDRSEV- 280 Query: 348 ENTRSIGFGQEVKHRIMIGTY-VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 G +V RI + Y SSR YL A+++R + F E + D I+T Sbjct: 281 --------GWDV--RIALSAYGSFSSR----DYLSAQRLRCR-QMYFHEKIFETADAIVT 325 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 P T +A+ L + ++G + +I +++A N GLPAI+VP +P+GLQ Sbjct: 326 PMTGVTAYALQDDALSTGELDYINGAALVRYSIAGNFLGLPAITVPVGYDRGGLPVGLQF 385 Query: 464 IGQPFREETLFSVGQIIEKEAG 485 IG+P+ E TL + +++ G Sbjct: 386 IGRPWSEATLLHLAYAMQEACG 407 >gi|56696373|ref|YP_166730.1| indole acetimide hydrolase [Ruegeria pomeroyi DSS-3] gi|56678110|gb|AAV94776.1| indole acetamide hydrolase [Ruegeria pomeroyi DSS-3] Length = 459 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 120/421 (28%), Positives = 194/421 (46%), Gaps = 42/421 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD T T A + L G +P ++ V +++ G V+ K M E A G Sbjct: 68 LSGLPVVAKDNINTTTHPTSAGTGALLGHKPATDAGVVRRITAAGGVIGAKAGMHELAFG 127 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ + G V +P PGGSSGG++AA+A + +GTDTGGS R PA+ Sbjct: 128 ITSNNAVTGAVRNPHDP-----ALIPGGSSGGTAAAIAAGIFPLGLGTDTGGSCRIPAAL 182 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 GTVG +P+ GR R G++ + +LD G R V D ++L + + G+ Sbjct: 183 CGTVGFRPSTGRYPRDGVVPISHTLDTVGSFARCVADISLLDEVMTGH------------ 230 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 P R + G+ +G+P + L P +++ ++ L+ AGA IVE+SL Sbjct: 231 PTLRR---DDLAGVRLGLPTVRFFENLDPAVERATADALTRLEAAGATIVEVSL------ 281 Query: 311 LPAYYIISPAEA-SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ-EVKHRIMIGTY 368 I + AEA S + Y+ VR + E+ G G +VK I + Sbjct: 282 ---QDIWAHAEAFSIPVGLYEVVRDLPHYLQEHAPEVSFEALVAGIGSPDVKG--FIASQ 336 Query: 369 VLSSRCYDSHYLRARKI-RTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + + Y A ++ R + R + F E +D I+ PTTP +A P+G +E + Sbjct: 337 LGEDAIPEQAYREAMEVHRPAMLRIYRSVFGENALDAIVFPTTPLTARPIGDDETVELNG 396 Query: 427 GHI-----YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + Y +A N+ G P IS+P L +P+G++ P + +L ++ E Sbjct: 397 ARVPTFPTYIRNTDLAPNI-GAPGISLPCQL-SSGLPVGIEFDALPGADGSLLALASAAE 454 Query: 482 K 482 K Sbjct: 455 K 455 >gi|256369013|ref|YP_003106521.1| amidase [Brucella microti CCM 4915] gi|255999173|gb|ACU47572.1| amidase [Brucella microti CCM 4915] Length = 471 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 185/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 79 LDGRIVSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 138 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +I +DTGGS+R PA+ Sbjct: 139 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAISSDTGGSVRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 194 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 251 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 252 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 300 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 301 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 351 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 352 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 387 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 388 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 445 Query: 475 SVGQIIEK 482 + IEK Sbjct: 446 AAALSIEK 453 >gi|120611101|ref|YP_970779.1| amidase [Acidovorax citrulli AAC00-1] gi|120589565|gb|ABM33005.1| Amidase [Acidovorax citrulli AAC00-1] Length = 522 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 138/493 (27%), Positives = 227/493 (46%), Gaps = 59/493 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E R R+ ++IS VEL+++ I IE N +NA +AR A E+++ ++ G Sbjct: 14 LTAPELRLRIARREISPVELLEACIARIEALNPYVNAITATCYDRARNEAREAERAVLRG 73 Query: 67 DARDLEGIPIG-IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L +KD AT+G+ T S I P ++ + +L GA++ GK N+ Sbjct: 74 DVLGLLHGLPLGVKDLEATQGLLTTYGSQIYREHIPAEDNVLVARLRRAGAIVTGKTNIP 133 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G+++ + +G +P+ + GGSSGGS+AA+A + G+DTGGS+R Sbjct: 134 EMGAGANSRNTVWGATGNPF-----DPRLNAGGSSGGSAAALACDMLPVCTGSDTGGSLR 188 Query: 186 QPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA+ G VG +P+ G S ++ + P + G + RTV ++ + L A AG Sbjct: 189 IPAAKCGVVGFRPSPGVVPSSRKLLGWTP-ISVVGPMGRTVEEACLQLAATAG------- 240 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLD---YLS-PTIDKTWQQGISWLKDAGAKIV 300 M+ G P Y LD +LS P +D + + + + +D GA V Sbjct: 241 -------------------MSAGDPLSYPLDPAVFLSLPEVDLSTLR-VGYTEDFGACAV 280 Query: 301 EISLPHT---QYALPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYE-NTRSIG 354 + + T + A + S S +L LR E E YE + S+G Sbjct: 281 DDGIRETFRGKIAAMRHLFRSCDPLSLDLGDVHRCFDVLRAEAFVAGTREAYERDPASLG 340 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + + ++ DS + +A + R L + F +AFE D+IL PTTP S F Sbjct: 341 PNTRANYEMGAAMTLI-----DSAWAQAEQTRILAR--FQKAFES-FDIILAPTTPVSPF 392 Query: 415 P---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P L N + Y + T + PA+S+P + MP GLQ++G+ FR+ Sbjct: 393 PWTELYASHINGEPQANYYRWLALTYVTTLTTHPALSLPCGRDGRDMPFGLQVVGR-FRD 451 Query: 471 ET-LFSVGQIIEK 482 + ++G+ +E+ Sbjct: 452 DLGTLAIGRAMEQ 464 >gi|194291831|ref|YP_002007738.1| amidase [Cupriavidus taiwanensis LMG 19424] gi|193225735|emb|CAQ71681.1| Amidase [Cupriavidus taiwanensis LMG 19424] Length = 508 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 126/445 (28%), Positives = 200/445 (44%), Gaps = 58/445 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD G+ T A + L G ++ V ++L + GAV+L K N+ E A G Sbjct: 92 LHGMPVLVKDNIECAGMATTAGAECLRGNVSASDAFVIRRLREAGAVVLAKTNLHELASG 151 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ G ++P+ TPGGSSGG++A +A +GTD SIR PAS Sbjct: 152 GETVSTLGGQTLNPYDL-----ARTPGGSSGGTAAGIAASFGVLGLGTDGVNSIRSPASA 206 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV---- 246 VG++PT G SR G+I + D G ITRTV D+A++L IAG+D D Sbjct: 207 NNLVGLRPTMGLISRAGLIPCGLTQDTIGPITRTVADAALMLDVIAGHDPADPVTSEGAG 266 Query: 247 NLPVPDYERALDQ-SIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 +LP Y +LD+ ++G +G+ + + D P ++ QQ ++ + GA +V+I Sbjct: 267 HLPA-SYAASLDRDGLRGARIGVLRSFFGGQDEHRP-VNAVMQQALALIAAQGAGLVDID 324 Query: 304 LPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENTRSIG------- 354 L A ++ E + +L Y + G+RV +DI+ S+ Sbjct: 325 DAIRPDELLASTLVHHYEMARDLDAYLSQLAPGVRVRSIQDIIAAGGVHPSVAGTLATAV 384 Query: 355 --FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GQE ++R R H LR + +R L+ + +D ++ P Sbjct: 385 ALSGQEAEYR---------ERLQRQHALR-QWLRDLVA-------QHRLDTLVFPHQRRL 427 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL------CEKKMPLGLQLIGQ 466 P+G+ + N V A G PAI +PA + +P+GL+ G Sbjct: 428 VVPVGETQTE-------RNGVLASAT---GFPAIVIPAGFSAPERNAPQGVPVGLEFFGL 477 Query: 467 PFREETLFSVGQIIEKEAGYFRPHK 491 PF E L + E+ RP + Sbjct: 478 PFTEPVLLRLAFATEQALQARRPPR 502 >gi|254703914|ref|ZP_05165742.1| amidase [Brucella suis bv. 3 str. 686] gi|261754565|ref|ZP_05998274.1| amidase [Brucella suis bv. 3 str. 686] gi|261744318|gb|EEY32244.1| amidase [Brucella suis bv. 3 str. 686] Length = 445 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 185/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDVASEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ V LP Sbjct: 168 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILADAVMAGEKPILPEV-LP 225 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 V G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 226 V-----------NGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 274 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 275 RLKEATRIGSIAGIEASHIHASTWLADLDANVDIRVKRPLSVRIKVPLEAY--------- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 326 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 361 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + N + T N L +I++P + K+P GL L + ++ L Sbjct: 362 ASVSHDEEEYDRVENLLLRDTQVANQFDLCSITLP--MPGMKLPTGLMLTARNDSDKRLL 419 Query: 475 SVGQIIEK 482 + IEK Sbjct: 420 AAALSIEK 427 >gi|192360851|ref|YP_001981736.1| urea amidolyase [Cellvibrio japonicus Ueda107] gi|190687016|gb|ACE84694.1| urea amidolyase [Cellvibrio japonicus Ueda107] Length = 601 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 119/418 (28%), Positives = 185/418 (44%), Gaps = 45/418 (10%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +A L G+P +KD GI T A + P ++T +L GA++LGK N+ Sbjct: 62 DANALPLYGVPFAVKDNIDVAGIPTTAACPAFT-YIPSADATSVARLKAAGAIVLGKTNL 120 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+FA G S YG V + +++ ++ GGSS GS+ +VA L S+GTDT GS Sbjct: 121 DQFATGLVGTRSPYGAVPNSFKA-----EYVSGGSSSGSATSVAQGLVPFSLGTDTAGSG 175 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F VG+KPT GR S G++ SLD I TV D+ ++ + + G+D+ D Sbjct: 176 RVPAGFNNVVGLKPTKGRFSTQGVVPACRSLDCVSIFALTVDDANLVAQLLQGFDQADGY 235 Query: 245 CVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P P Y A + V IP + Y + WQ + L+ G ++VE+ Sbjct: 236 SRQQPEPAHYFPATPR------VAIPAKPDW-YGDSAAEAAWQTTLQKLQAFGVELVELD 288 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 + L P A R+ V +R D+ + V+ I Sbjct: 289 F-TPMFTLAQLLYGGPWVAE----RHAAVAEFMRDHAADMNPV------------VRGII 331 Query: 364 MIGTYVLSSRCYDSHYLR---ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 ++ Y + Y R AR I+TL+ Q +D +L PT P E Sbjct: 332 ENAANFSATDTYRAEYRRADFARVIQTLM---------QDIDALLVPTAPRHPTIAQVET 382 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + G + +T VN+A A++VPA + +P G+ LI ++++ L G+ Sbjct: 383 DPVGVNSQL--GTYTNFVNLADCSALAVPAGMRSDGLPFGITLIAPAWQDDALVDFGR 438 >gi|307102637|gb|EFN50907.1| hypothetical protein CHLNCDRAFT_141670 [Chlorella variabilis] Length = 646 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 123/448 (27%), Positives = 190/448 (42%), Gaps = 52/448 (11%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKD-CF 82 E + + + A E + M + Q+ R A S R G L+G+P +KD C Sbjct: 158 ENIIAAVAASEAMSPPMRFLVAHEPQRLRQQAAASTARWQQGRPLSPLDGVPYAVKDGCD 217 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 A T + + P Q L D GA+++GK N+ E +G++ G Sbjct: 218 ALPYPTTTGTGFMAEWRTPVRSLAGVQALLDAGALLIGKANLHEIGLGTTGLNILTGTPR 277 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +P T GGSS GS+A VA LC ++G+D GGSIR PA+ G VG+KPT+ Sbjct: 278 NPHSPAHHT-----GGSSSGSAALVAAGLCPFAVGSDGGGSIRIPAAACGVVGLKPTH-- 330 Query: 203 CSRLGIISFAPSLDQ----AGIITRTVRDSAIL--LKAIAGYDECDATCVNLPVPDYERA 256 R+G P +DQ G + +V+D A++ + A G +A L Sbjct: 331 -ERVGTAVGTPPIDQTVSVVGPLAASVQDCALMYAVAANTGQRPGEAPPPVLLPAALGGG 389 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 + + G T G + D S + + + ++ L+ AG +V + LP A+ Sbjct: 390 GRRPLAGKTAG----WFEDAAS-AVAEACRSAVAMLEGAGLAVVPLRLPELGLLRAAHSC 444 Query: 317 ISPAEASSNLARY---DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +E +N+A G R + E + L + + GF Sbjct: 445 TIASEMRNNMAAALSDGGARRRMNAETRISLAV-----AAGF------------------ 481 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 +HY++A+KIRT ++ F AF + D+ILTPT P +A P+ G Sbjct: 482 -QAAHYIQAQKIRTRVEAHFRSAFAR-CDLILTPTLPCTAPPIKPAALQCGETDLTTTTA 539 Query: 434 ---FTVAVNMAGLPAISVPAALCEKKMP 458 + +A N GLPAISVP + P Sbjct: 540 LMHYMLAPNFIGLPAISVPVGVVPSTHP 567 >gi|229493874|ref|ZP_04387646.1| amide hydrolase [Rhodococcus erythropolis SK121] gi|229319151|gb|EEN85000.1| amide hydrolase [Rhodococcus erythropolis SK121] Length = 477 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 204/465 (43%), Gaps = 33/465 (7%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKR 62 L++++ +E + S +S E+ ++ IQ ++ N +NA ++ Q R AAE S ++ Sbjct: 6 LHWLSATEMAASVASNSLSPNEIAEAMIQRVDAVNPSINAIVQFDREQVTRDAAELSRQQ 65 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L G+P IKD A G+ T + + V +L G + LGK Sbjct: 66 EAGEKLGPLHGVPFTIKDLTAVDGLPTTFGMKPMADNIATGNAVVVDRLRGAGGLFLGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N E + YGP +PW+ +S SSGG+SAAVA L + G+D G Sbjct: 126 NTPESGYYGGTDNHLYGPTHNPWKLGNSAGG-----SSGGASAAVAAGLGPLAEGSDGAG 180 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R P++ G VG+KPT G + + + G ITRTV D+A++L +AG D D Sbjct: 181 SVRIPSALCGVVGLKPTTGVIPQTILAGRFYNWAYHGPITRTVADNALMLDIMAGPDNAD 240 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + Y A ++G+ V L ++ P + +S ++ GA+I E Sbjct: 241 PLSIERAETSYVEASKGDVKGLRVAWSPNLGLGHVDPEVLAVCLDALSAFEELGARITE- 299 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +P + + + ++G+ D+L+ +EN R EV Sbjct: 300 --------------ATPQWGNPSESMWNGIWVPGFASEYDLLD-WENQRG-----EVDDN 339 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-- 420 +I + R RA R ++ +T AF DV+++PT ++ FPL + Sbjct: 340 -LIEIMHEAERLTGVDVGRADAFRGVMWDTWT-AFMNDYDVLVSPTLASATFPLSQFAPS 397 Query: 421 --NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 + + + +FT NM PAI+VPA P+GLQ+ Sbjct: 398 WLEGASLREQLLDWLFTYPYNMLNNPAITVPAGFTADGRPVGLQI 442 >gi|254718725|ref|ZP_05180536.1| amidase [Brucella sp. 83/13] gi|265983701|ref|ZP_06096436.1| amidase [Brucella sp. 83/13] gi|306838702|ref|ZP_07471537.1| amidase [Brucella sp. NF 2653] gi|264662293|gb|EEZ32554.1| amidase [Brucella sp. 83/13] gi|306406189|gb|EFM62433.1| amidase [Brucella sp. NF 2653] Length = 445 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 118/428 (27%), Positives = 187/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDVAGEPTLAGSVVRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D+ + +AG + T + Sbjct: 168 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVADAILTDAVMAG----EKTILPEA 223 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH--- 306 +P ++G+ + +PK+Y L + P + ++ ++ L+ AGA I ++++ Sbjct: 224 LP---------VKGLRIALPKDYLLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIG 274 Query: 307 -----TQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 T+ A S AS+ LA D V+ L V K LE Y Sbjct: 275 RLKEATRIGSIAGIEASNIHASTWLADPDANVDIRVKRPLSVRIKVPLEAY--------- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 326 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 361 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + + + T N L +I++P + K+P GL L + ++ L Sbjct: 362 ASVSHDEEEYDRVESLLLRDTQVANQFDLCSITLP--MPGTKLPAGLMLTARNGSDKRLL 419 Query: 475 SVGQIIEK 482 + +EK Sbjct: 420 AAALSVEK 427 >gi|170781842|ref|YP_001710174.1| putative amidase [Clavibacter michiganensis subsp. sepedonicus] gi|169156410|emb|CAQ01558.1| putative amidase [Clavibacter michiganensis subsp. sepedonicus] Length = 503 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 142/505 (28%), Positives = 223/505 (44%), Gaps = 77/505 (15%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL+ ++ D+L+ +++ ELV Y++ IE + Q+ A+ V A +A A ++ Sbjct: 31 ELHHLSAHHLWDQLQRGEVTPTELVTHYLERIERLDPQLGAFTTVTADRALERARHVERE 90 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE---STVTQKLWDNGAVML 119 + L G+P G KD G+ T S + FR H + Q L D G + L Sbjct: 91 VPR--TAPLWGLPFGDKDLSERAGVRTTFGSRL---FRDHVSDRTDAIPQALDDAGGISL 145 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK + EF + S E+ P +PW D+T GSSGG++ AVA L + G+D Sbjct: 146 GKTSAPEFGLPSYTESLVAPPARTPW---DTTRGAG--GSSGGAAVAVAAGLLPFAPGSD 200 Query: 180 TGGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 GGS+R PA+ TG VG+KP+ G + G S A L G + R+V D+A+LL A+ G Sbjct: 201 GGGSVRIPAAATGLVGLKPSRGLVPAGSGQESLA-GLVVPGPLARSVADAAMLLDAMIGR 259 Query: 239 DECDATCVN--LPVPDYERA---LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 VN +P P RA D + G V +++ ++ T W ++ Sbjct: 260 -------VNGRIPHPFTLRAPEDPDGDLLGAAVRGEGRFQIGVMTTT---PWDDAYEIVR 309 Query: 294 DA----------------GAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 DA G + +++L P YA PA+ I A A+ G+ Sbjct: 310 DASADDALAIAVRELATIGHGLEDLALRPDPTYA-PAFRTIWQAGAA-----------GI 357 Query: 337 RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 EG D L++ E + ++ LS+R + + F Sbjct: 358 PAEG-DQLDLLE---------PLTRWLVERGRALSARDLARALAQLAAYERSVIAQFAH- 406 Query: 397 FEQGVDVILTPTTPTSAFPLG---KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 VD +LTP P+G E+ + +T N+ GLPAI++P L Sbjct: 407 ----VDAVLTPALALEPRPVGWYDAEDGERNFAQQVQYTPYTSFANVTGLPAITLPVHLT 462 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQ 478 + +P+G+QLIG+P E TL ++G+ Sbjct: 463 DDALPMGVQLIGRPGGESTLLAIGR 487 >gi|296271160|ref|YP_003653792.1| amidase [Thermobispora bispora DSM 43833] gi|296093947|gb|ADG89899.1| Amidase [Thermobispora bispora DSM 43833] Length = 462 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 133/479 (27%), Positives = 210/479 (43%), Gaps = 56/479 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S VE+ ++ + ++ N+Q++AYI + AR AEE+ +R G+ L G+P+ IKD Sbjct: 23 LSPVEVTEALLARLDAVNAQLHAYITCTPELARRQAEEAAERYRRGERAPLLGVPVSIKD 82 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 F T S G +S +L G V+ GK N+ EF ++NE Sbjct: 83 AFDLADYETTFGSLTCRGRIVRSDSGAVARLRRAGVVIPGKTNVPEFCHSATNENLLIPD 142 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +PW T GGSSGG++A+V G L A++G+D GGSIR PA+F G VG KPT Sbjct: 143 TANPW-----DPSRTSGGSSGGAAASVGGGLATAALGSDGGGSIRIPAAFCGLVGFKPTT 197 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 G C AG + TV D+ ++ + +A T L + R + Sbjct: 198 GTCPDERGFRAMTDFVTAGPLAWTVDDARVVTEVLAERRFARETPPRLRIGFCARPGGRP 257 Query: 261 IQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 ++ + + + R+ L D G +VE +P + I P Sbjct: 258 VEAPVRAAVERVARI-----------------LADLGHDVVECDVPIGGW----QEIFGP 296 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 L D +R E + +L+ E+ R M+ T ++R + Sbjct: 297 ------LVLDDELR-----ERQHLLQR----------PELLTRYMLATLRAAARQTSADV 335 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--SMGHIYNDV-FTV 436 RAR+ +R FE V+LTPT T AFP + + ++ FT Sbjct: 336 ARARERLVEFRRRVDRFFED-YSVVLTPTVATVAFPHRQRPTQIAGEDVDWLWGAFPFTA 394 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY-FRP--HKW 492 N+A PAIS+PA L + +P+G QL+ + + L +V + +E+ G+ RP +W Sbjct: 395 PFNVAATPAISLPAGLAD-GLPIGAQLVARCGADALLLNVAEELEEALGFDHRPVRERW 452 >gi|134100032|ref|YP_001105693.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL 2338] gi|291002978|ref|ZP_06560951.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL 2338] gi|133912655|emb|CAM02768.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL 2338] Length = 445 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 126/467 (26%), Positives = 204/467 (43%), Gaps = 55/467 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLE 72 DRLR +++ EL + A+ + ++NA++ V A+ A +A ++D + GD L Sbjct: 22 DRLREGAVTSAELTAHALDAVRGLDQELNAFVSVDAEGALESARKADAELAAGDDLGPLH 81 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP+ +KD T G+ T S ++ ++L GAV++GK EFA G + Sbjct: 82 GIPVAVKDIIETAGMRTTMGSAHFADHVSTADAECVRRLRAGGAVIVGKTTTHEFAYGPT 141 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + G +P + SSGGS+AAVA + ++GTDTGGS+R PA+ G Sbjct: 142 GDRAAGGASRNPHDPAAMSGG-----SSGGSAAAVAAGMVPLAVGTDTGGSVRIPAALCG 196 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KP YG G+ + SLD G+I RT RD + +AG P Sbjct: 197 VAGFKPAYGAVPADGVFPLSRSLDHVGVIARTPRDCRTAYRVLAGLRAGPPRSAGGPA-- 254 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 TVG L +++ + +S G + E+ L Sbjct: 255 ------------TVGWIAPGALFETDREVEELARAALS-----GRAVQEVELGDAAGLRQ 297 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 Y I AEA Y + E D E+ F EV R+ + Sbjct: 298 TYNGIQDAEA-----------YAVHAERVADAPEL--------FTPEVLERLQA-----A 333 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE-NNSGSMGHIY 430 +R ++RA + R + + D++ PTTP +A +G+ E +G + Sbjct: 334 ARTPGWRHVRAFEERQRWRAEVARLLSHH-DLLALPTTPFAAPAVGQREIEVNGREVEVR 392 Query: 431 NDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + ++ N+AG+PA++VP + +P+GLQL+ +P E+ LF+ Sbjct: 393 WGLLSLTSPWNIAGVPALTVPVG-TSRGLPVGLQLVCRPGDEDLLFA 438 >gi|39976499|ref|XP_369637.1| hypothetical protein MGG_05827 [Magnaporthe oryzae 70-15] gi|145011931|gb|EDJ96587.1| hypothetical protein MGG_05827 [Magnaporthe oryzae 70-15] Length = 442 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 131/490 (26%), Positives = 203/490 (41%), Gaps = 69/490 (14%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + SE+ +++R+ +++ S + I++ + + A+ + ++ + A + D RI Sbjct: 8 LTASETLEKVRAGELTVERYAQSLLDRIKDRDDAVQAWAYLEPEQVLSQARDLD-RIPPE 66 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L G+ IG+KD F TK + TQ S I P +S L GA+++GK E Sbjct: 67 SRGPLHGVAIGVKDIFYTKDMPTQHNSPIYANDAPAVDSGPVAILRQAGALIVGKTTTTE 126 Query: 127 FAM---GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 FA G+ + P R TPGGSS GS AAV A ++GT TGGS Sbjct: 127 FAATVAGTKTRNPH-----DPAR--------TPGGSSSGSGAAVGDMQAALALGTQTGGS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +P SF G KPT+ SR G ++ LD G+ R V D +L + D+ D Sbjct: 174 TIRPGSFNGIYAYKPTWNAVSREGQKIYSLILDTLGVYARCVADLQLLADVLGIRDDDD- 232 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV-EI 302 P P + +QG I K P Q+ L+ GA V EI Sbjct: 233 -----PRPPFA-----GVQGARFAILKTVVWPQAGPGTQAAMQKAADLLRAHGAAAVDEI 282 Query: 303 SLPHTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 SLP ALP ++ +I+ S+ Y G R L +++ EN +I Q++ Sbjct: 283 SLPADLDALPEWHRVVITSDGRSAFRPEYAGARDQL---SPYLVDQVENAAAITRRQQLA 339 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R + G D ++ P+ P A P G E Sbjct: 340 A----------------------FDAIAAARPRVDEILAGYDAVVVPSVPDEA-PTGLES 376 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS----V 476 S + I+ + T P +++P + E MP+GL L+ +++ L S V Sbjct: 377 TGSAAFCVIWTALHT--------PVVNIPGFMGENGMPIGLSLVAPRYQDRRLLSVCEAV 428 Query: 477 GQIIEKEAGY 486 G+I E E G+ Sbjct: 429 GRIFEAEGGW 438 >gi|309792107|ref|ZP_07686580.1| putative amidase [Oscillochloris trichoides DG6] gi|308225851|gb|EFO79606.1| putative amidase [Oscillochloris trichoides DG6] Length = 468 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 127/491 (25%), Positives = 207/491 (42%), Gaps = 55/491 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ S+ +R E+V+++I IE N +NA ++ +AR A E+D+R+ G Sbjct: 7 LSASQLAQAIRQGTFLPSEVVNAHIARIEAVNPALNAVVQQRFARARQEAREADERVRQG 66 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDG--FRPHYESTVTQKLWDNGAVMLGKLN 123 L G+PI +K+ F G T A +L P ++ +L GA++LGK N Sbjct: 67 APLGPLHGVPITVKEAFDVAG--TPATCGLLSAKVHLPQQDAVAVARLRAAGAIVLGKTN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + + +G +PW S PGGS+GG +A +A A +G+D GS Sbjct: 125 TPDNCWDQETVSYLFGRTNNPWDLARS-----PGGSTGGEAAILAAGGSALGLGSDIAGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGI----ISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 IR PA++ G VG++PT G + +G + L+ G + R V D A+ ++ Sbjct: 180 IRLPAAWCGIVGLRPTSGLINEVGFWPPSVGHLADLNAVGPMARRVEDVALAFALLSEQP 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 NL + LD + IP S + Q + L + G + Sbjct: 240 AQPLDAPNLSGQRFAFWLDDGL------IPS-------SGAVQGGVQAAVRALTERGLRA 286 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + + H ++A+ + AS N + + G G E++ R + Sbjct: 287 TQAAPTHRRFAVAGWL------ASINADEREAIGRGF---GGG--ELWSPLRELQNNLAD 335 Query: 360 KHRIMIGT--YVLSSRCYDSHYLRARKI-----RTLIKRDFTEAF-EQGVDVILTPTTPT 411 + RI G Y LSS Y S + + R ++ +F E E G + P PT Sbjct: 336 QPRIASGALRYWLSSH-YGSQLVTLLGVDGHAWRRELQAEFIELVGEDGFAI--CPVFPT 392 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +A + S+ + VN+AGLPA+ VP MP+G+QL+G P E Sbjct: 393 TA------PRHGWSVVFPLTISYQTWVNLAGLPALVVPVGRSGNGMPVGVQLVGAPGTEW 446 Query: 472 TLFSVGQIIEK 482 L G I++ Sbjct: 447 MLLKAGYAIQQ 457 >gi|116624038|ref|YP_826194.1| amidase [Candidatus Solibacter usitatus Ellin6076] gi|116227200|gb|ABJ85909.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 588 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 113/506 (22%), Positives = 213/506 (42%), Gaps = 59/506 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + ++ F V+ ++++ +++ EL Y+ + N ++N + + + A A A+++D Sbjct: 122 LEDVAFWPVTHLAQLIKTRQVTSTELTKMYLARLHKYNEKVNCVVTFLDEVALAQAKQAD 181 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G + L GIP G KD A KG T S E+++ + L D GAV+L Sbjct: 182 AEIAAGRYKGALHGIPWGAKDIIAVKGYKTTWGSGAYKEQMLDEEASLVEMLRDAGAVLL 241 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 KL E A G + + G +PW +++ + G + ++ + GF IG++ Sbjct: 242 AKLTTGELAQG---DQWFGGQTKNPW-NIEQGSSGSSAGPASATAGGLVGF----GIGSE 293 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P++ G G++PT+GR SR G+++ + + D+ G + R D A+++ IA D Sbjct: 294 TSGSILSPSARCGVTGLRPTFGRISRYGVMALSWTQDRMGPLCRYAEDCALVMSVIARPD 353 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + +P ++ LD ++ + VG + + + K ++ + +K G ++ Sbjct: 354 GRDLSVSEIPF-NWNAHLD--VRKLRVGYLEGAFEETRDAAVKKIEERTLEQVKALGIQL 410 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V + LP +S++ GV + + EM R+ F Sbjct: 411 VPVKLPEWSID------------TSSIGVESGVFFDDLIRSNRDKEMTNPGRANSF---- 454 Query: 360 KHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 SSR + YL+ ++ R+++ EA + +DV L P Sbjct: 455 ----------RSSRLIPAVEYLQGQRARSMMMAKLAEA-TRDIDVYLVPVNQGGGGGAAG 503 Query: 419 EEN--------------NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 N +G + N+A PA++V + P + Sbjct: 504 RGAAPADGGRGGRGGGPNRSVVGRHFG-----MANLACYPALNVVNGFTDAGTPTNITFY 558 Query: 465 GQPFREETLFSVGQIIEKEAGYFRPH 490 +PF E L ++G+ + G+ H Sbjct: 559 ARPFGEAELLALGKAYQDATGFHLKH 584 >gi|146278874|ref|YP_001169033.1| amidase [Rhodobacter sphaeroides ATCC 17025] gi|145557115|gb|ABP71728.1| Amidase [Rhodobacter sphaeroides ATCC 17025] Length = 477 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 129/493 (26%), Positives = 215/493 (43%), Gaps = 42/493 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L ++ ++ ++ IS VE+V + IE S + +NA A++A AA +S+ Sbjct: 4 TSLAYLGATQLTALYAARKISPVEVVSELLSRIEASAATLNAVCFTYAEEALEAARQSEA 63 Query: 62 RIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R ++G + ++G+P +KD G T S + + V Q+L + GAV+ Sbjct: 64 RYMSGAQKPGRIDGVPTALKDGTMMAGKVTTYGSLLYADHVAAKSAPVVQRLVEAGAVIH 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + EF+ + +G +PW FTPGGSSGGS AA+A L + G+D Sbjct: 124 ARTTTPEFSCAPFCHSRQWGVTRNPWNP-----AFTPGGSSGGSGAALAAGLAPLATGSD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS +G VG KP YGR + P + G + RTV D ++ +AG Sbjct: 179 IGGSIRIPASASGVVGFKPPYGRVPSTPPFNLDP-YNHPGPMARTVEDCLLMQNVLAGPH 237 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + P E LD+S ++G + ++ + P + + + GA+ Sbjct: 238 PEDIASLK---PKLELRLDRSEVKGWKIAYSLDFGFMQIDPAVRANTLAALEVFRALGAE 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E++LP + + + A A+ + A + E +D L Y F +E Sbjct: 295 VTEVALPWS-------WEVYRAAATHHRALFGAWLAEYLDEREDRLTSYARR----FARE 343 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 L++ D YL ++ I F E G D+ L PT A P Sbjct: 344 S----------LATTTRD--YLAGMEVEGRIWSHFGPMME-GFDLFLCPTLAIPAVPAEF 390 Query: 419 EEN-----NSGSMGHIYNDVFTVAVNM-AGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + + N + + NM + P +SVP+ +P G+QL+G+ + ++T Sbjct: 391 DFSDPLVINGQQIDSYLGWTMALPFNMLSRCPVLSVPSGHAPNGVPTGIQLVGRTYDDQT 450 Query: 473 LFSVGQIIEKEAG 485 +F+ G E G Sbjct: 451 VFTAGLAYEAATG 463 >gi|319792155|ref|YP_004153795.1| amidase [Variovorax paradoxus EPS] gi|315594618|gb|ADU35684.1| Amidase [Variovorax paradoxus EPS] Length = 449 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 115/399 (28%), Positives = 178/399 (44%), Gaps = 50/399 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK-LWDNGAVMLGKLNMDEFAM 129 L G+P+ +KD + G T A S + +G P V L GA ++GK NM EFA Sbjct: 71 LAGLPVSVKDLYDVAGETTMAGSAVCEGEPPAARDAVAVARLRTQGAAIVGKTNMTEFAF 130 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P D+ PGGSS G++ +VA L A +G+DTGGSIR PA+ Sbjct: 131 SGVGINPHYG---TPHNPADAGMPRIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG K T R R G A SLD + R+V D + DA ++P Sbjct: 188 LCGLVGFKSTQSRVPRTGAFELARSLDTVCAMARSVEDCLV----------ADAAIADVP 237 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ- 308 + + ++G+ + +P+ D + + + +++ + L AGA++V+I+L Sbjct: 238 L----VVRRRPLRGLRLAVPRTLMFDSIETPVARAFERSVQALSAAGAEVVDITLAELAE 293 Query: 309 -YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++ A SP EAS+ R+ + E GF V RI +GT Sbjct: 294 IASINAPGGFSPIEASA----VHRERFAAKRE--------------GFDSRVAARIALGT 335 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--- 424 V R D ++ + R I R A E G D ++ PT P A P+ ++ Sbjct: 336 EV---RAADYIVMQDHR-RDWIGR-VGHALE-GFDALICPTVPIIAPPIASLAEDAAFFQ 389 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 + G + + F A+N A S+P ++P+GL L Sbjct: 390 ANGLLLRNTF--AINFLDGCAFSLPCH-APDELPVGLML 425 >gi|207110292|ref|ZP_03244454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Helicobacter pylori HPKX_438_CA4C1] Length = 115 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 58/109 (53%), Positives = 80/109 (73%), Gaps = 1/109 (0%) Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENT 350 LK+ G +IVE + + Y + YYIIS AEASSNLAR+DGVRYG R + KD+ E+Y + Sbjct: 7 LKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVRYGRRAQNVKDLKELYLKS 66 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 RS GFG EVK RIM+G +VLSS YD++YL+A+++R +IK + + FE+ Sbjct: 67 RSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIKEQYNKIFEE 115 >gi|121713462|ref|XP_001274342.1| amidase, putative [Aspergillus clavatus NRRL 1] gi|119402495|gb|EAW12916.1| amidase, putative [Aspergillus clavatus NRRL 1] Length = 550 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 101/316 (31%), Positives = 155/316 (49%), Gaps = 38/316 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V + RD L S+V+LV++Y+ I NS ++ +E A + +R I Sbjct: 45 VDDLRDGLSKGCFSSVDLVNAYMTRIHEVNSTLHVVLEANPDALDIARQLDLERKIGLVR 104 Query: 69 RDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI +K TK + T A S+ L G + +STV +KL DNG V+LGK +M E+ Sbjct: 105 GPLHGLPIFVKANIGTKDKMGTTAGSYALVGAQTDEDSTVAKKLRDNGLVILGKTSMSEW 164 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTP-GGSSGGS--------------SAAVAGFLC 172 A +RS++S++ + GG + G+ L Sbjct: 165 AN---------------FRSLNSSNGWNAQGGQTYGAYYPEQDPSGSSSGSGVGTDLGLA 209 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A++GT+T GSI P+ + VGIKP+ G SR +I + D G + RTV+D+A++L Sbjct: 210 LAALGTETNGSILSPSEKSNIVGIKPSVGLTSRHLVIPVSERQDTIGPMARTVKDAAMIL 269 Query: 233 KAIAGYDECDATCVNLP----VPDYERALDQS-IQGMTVGIPKEY--RLDYLSPTIDKTW 285 +AIAG D+ D + P VP+Y A S ++G +GIP+ LD + + Sbjct: 270 QAIAGPDKKDNYTLASPFGYNVPNYAAACKFSGLEGKRIGIPRNVINTLDASYAPVVSAF 329 Query: 286 QQGISWLKDAGAKIVE 301 G+S + AGA IVE Sbjct: 330 NAGLSVISAAGATIVE 345 >gi|313681290|ref|YP_004059028.1| amidase [Sulfuricurvum kujiense DSM 16994] gi|313154150|gb|ADR32828.1| Amidase [Sulfuricurvum kujiense DSM 16994] Length = 449 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 117/478 (24%), Positives = 213/478 (44%), Gaps = 64/478 (13%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNA--YIEVVAQKARAAAEESDKRIINGD 67 +E +RL++ + E+ S I+ I + +NA Y + A +A+ A + N D Sbjct: 9 TELLERLKTNSTTPKEIAQSCIERIRAIDPMVNAWEYFDEAAIEAQLAKIGT----YNRD 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+G+KD + T + TQ S + F P ++ + L +GAVMLGK EF Sbjct: 65 DYPLYGIPVGVKDIYNTFDMPTQMGSPLWSDFTPGNDARMIHYLRRSGAVMLGKTVTAEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A+ ++T R+ + +PG SS GS+ AVA + ++G+ T GSI +P Sbjct: 125 AVHYQDKT----------RNPHDLSR-SPGTSSSGSAVAVATGMVPVALGSQTAGSISRP 173 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G G KPT+G R+G++ SLD G R+V D A++ +A + E + V+ Sbjct: 174 ASYCGIYGFKPTFGVLPRIGVLKTTDSLDTLGFFARSVSDLALMFEASRVHGE-NYEFVH 232 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 + +Y D+ + +GI K + D S + ++ + LK ++ ++LP Sbjct: 233 QYIDNYVSVPDKVYR---IGIIKHPKWDLASESAKNAFEAWCARLKSPCLQVQTVTLPQF 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE-VKHRIMIG 366 + A + +Y+ + + F +E KH +M Sbjct: 290 CDTIHATH----------------------------QTIYDKSLAYYFKEEYAKHTLMSP 321 Query: 367 TY--VLSS--RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + ++ R Y A + ++ R+F +A+ D+++T T A P+G ++ Sbjct: 322 IFYDIIQDGLRITKEEYQDALEKQSRETREF-DAWMDSYDILITLATADEA-PIGLTTSD 379 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 I+ + GLP ++P E +P+G+ + + + ++ L Q + Sbjct: 380 IPDANLIWTYL--------GLPIATLPVLKGENHLPIGVSAVSRKYNDKLLLDFLQYL 429 >gi|298489862|ref|YP_003720039.1| amidase ['Nostoc azollae' 0708] gi|298231780|gb|ADI62916.1| Amidase ['Nostoc azollae' 0708] Length = 465 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 138/496 (27%), Positives = 215/496 (43%), Gaps = 66/496 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESDK 61 +L F + +R + +S +++V+ Y++ I N Q+ +Y V A A A A+ +++ Sbjct: 5 DLAFTPALKLAQLIRLRVVSPLDVVEIYLERIYRLNPQLGSYFTVTADLAVADAKAKTEL 64 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+PI IKD A GI + L P+Y+ V ++ G ++GK Sbjct: 65 LTTTSELPPFFGVPISIKDLNAVAGITCTYGNAALLNHIPNYDDGVVIRIKQAGFTIIGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E +E + P +PW ++TPGGSSGG++A+VA L A + G+D G Sbjct: 125 TATSELGSYPYSEPVGFPPARNPWNL-----EYTPGGSSGGAAASVAAGLSAIAQGSDGG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VGIKP GR ++ + + G I RTV D+A +L I+GY Sbjct: 180 GSIRGPAACCGVVGIKPARGRVTKAPVGDRLGGIAVNGPIARTVADAAAMLDVISGYFTG 239 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG----ISWLKDAGA 297 D ++ P P + A ++ + + I + L DK QQG + L++ G Sbjct: 240 DPYWLSDPQPSFFAA--TQVKNLRLKIAFSTSVPPLG-AADKNCQQGVLQTVELLEEFGH 296 Query: 298 KIVEISLPHTQYALPAYYII---------SPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + VE P + + I+ P EA L R+ R G E Sbjct: 297 E-VEERCPDFSGLVEPFQIVWQSGVAAAGIPPEALQPLNRWLLARTGSLAE--------- 346 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 YL+A + R AF VDV++ P Sbjct: 347 ------------------------------YLQALAQMQIFSRSIV-AFFDTVDVLVLPV 375 Query: 409 TPTSAFPLGKEENNSG--SMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIG 465 S +G+ EN S + +I N V V N GLPAI++P +P+ +QL+G Sbjct: 376 YLHSPIRVGEWENLSPEETFQNIINWVAPCPVANATGLPAIAIPVGFDSNGLPMSVQLVG 435 Query: 466 QPFREETLFSVGQIIE 481 +P E TL S+ +E Sbjct: 436 KPAAESTLISLAAQLE 451 >gi|307331401|ref|ZP_07610520.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306882960|gb|EFN14027.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 471 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 133/473 (28%), Positives = 213/473 (45%), Gaps = 39/473 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ + + +R S ++S VE + + IE ++NA+ V A+ A AEES Sbjct: 1 MTDIHNLTAVQLIERYASGELSPVEATRAVLHRIEQIQPEVNAFSRVDAEGALRQAEESA 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHIL--DGFRPHYESTVTQKLWDNGAV 117 +R G L +G+P+ +KD +G T S + +G ++ +L ++GAV Sbjct: 61 ERWRRGAPAGLVDGVPVSVKDILLLRGAPTLRGSRTVRPEGRAWDEDAPSVARLREHGAV 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +GK EF ++ YG +P+ + T GGSSGGS+AAVA S+G Sbjct: 121 FVGKTTTPEFGWKGVTDSPVYGVTGNPY-----DPQRTAGGSSGGSAAAVALGAGPLSLG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TD GGS+R PASF G +KPTYGR +F +L G +TR D+A+L+ I+G Sbjct: 176 TDGGGSVRIPASFCGIFALKPTYGRVPLYPASAFG-TLAHVGPMTRDAADAALLMDVISG 234 Query: 238 YDECDATCVNLPVPDYERALDQ---SIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLK 293 D D + + ++ AL + G+ V P + P + ++ + L Sbjct: 235 PDWRDWSQLAPSGGGFQEALAPGGGGVNGLRVAYSPSLGGAAAVDPEVAAAVRRAVDLLA 294 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + GA + EI P + + A++ + S AR V L E +++L+ R I Sbjct: 295 ELGAVVEEID-PGFEDPVEAFHTLW----FSGAAR---VVQPLGAEDRELLD--PGLREI 344 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Q + + YL A +R + F D+++TPT P +A Sbjct: 345 -CAQGASYSAL-------------DYLAAVDVRMALGHAMGR-FHSAYDLLVTPTLPITA 389 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 F G E FT N+ PA SVP L +P+G+QL+G Sbjct: 390 FEAGVEVPKGSEHTRWTGWTPFTYPFNLTQQPAASVPCGLSGAGLPIGVQLVG 442 >gi|284043580|ref|YP_003393920.1| amidase [Conexibacter woesei DSM 14684] gi|283947801|gb|ADB50545.1| Amidase [Conexibacter woesei DSM 14684] Length = 447 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 119/480 (24%), Positives = 196/480 (40%), Gaps = 74/480 (15%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + + +++SA E++D+++ I N +NA +++ A A A Sbjct: 6 ELTATSATTLARMIARREVSATEVLDAHLDRIAAINPTVNAVVQLAAGAADQARAADQAL 65 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L G+P +KD T G+ T A + P ++TV ++ GA++LGK Sbjct: 66 GRGEAVGPLHGVPFTVKDNTETAGVITAAGAPERAATTPERDATVVARMRAAGAILLGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N + G + YG R+ + D TPGGSSGG +A +A IGTD+G Sbjct: 126 NCPPWGSGVETDNEVYG------RTNNPHDLARTPGGSSGGEAAVIAAGGSPWGIGTDSG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGII-------SFAPSLDQAGIITRTVRDSAILLKA 234 GS+R PA F G +KPT G G+ + + Q G + RTV D + + Sbjct: 180 GSVRIPAHFCGVCALKPTQGLLPVTGVFDDEGPIGAISDPRTQVGSLARTVEDLGTMTRV 239 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 IAG D D + + D + G+ V + + L +P T + L Sbjct: 240 IAGPDGRDGGVPPVALGDPAAV---AAAGLRVAVHADNGLSAPTPETAATVRAAADVLAG 296 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AGA++ + LP +AL A Y+G G L++Y Sbjct: 297 AGARLADRLLPGDGHALTVEV----------WASYEG--------GMSSLDLY------- 331 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 R++ R +D++ R AF VDV+L P P A Sbjct: 332 -------RLL--------RRWDAY------------RADVLAFMDDVDVVLCPVYPVPAP 364 Query: 415 PLG---KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 P G E + + H + +T ++ G P VP + + +P+ +Q++ +P+ + Sbjct: 365 PHGGTAGAELRAVELQHAIS--YTTPFSLVGAPCAVVPFGVSPEGLPIAVQVVARPWHDH 422 >gi|168003211|ref|XP_001754306.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694408|gb|EDQ80756.1| predicted protein [Physcomitrella patens subsp. patens] Length = 516 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 120/453 (26%), Positives = 195/453 (43%), Gaps = 67/453 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L FM+V + ++SK +++VELV YI ++ + + A + + A A +D+ Sbjct: 67 DLAFMSVLQLGSLIKSKKVTSVELVKLYIARLKKVDYVLKAVVTFTEELALEQAVAADRL 126 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD FA G T S++ + ES V QKL GAV++ K Sbjct: 127 LTKGVYLGPLHGIPYGLKDLFAVPGYRTTWGSNLFKNQVINKESWVYQKLKAAGAVLIAK 186 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + + GSS G +A+ +IGT+T Sbjct: 187 LAAGSLAW---DDVWFGGQTKNPWNIYEGST-----GSSAGPAASTCAGNVPFAIGTETV 238 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+S TG G++PT+G R +S + SLD+ G + R D A++L AI G D Sbjct: 239 GSITLPSSRTGITGLRPTFGMVGRSWAMSLSESLDKVGPLCRYAADCALVLDAIRGKDPR 298 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + N+ + D I +TVG YL P D + ++ LK K+V Sbjct: 299 DWSSKNIHLED---PFSVDITKLTVG--------YL-PDADMGVVKALAGLK---VKMVP 343 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 L Y +P+ AE N+ G D+L ++N + G + Sbjct: 344 FKL---NYTVPS------AEFIMNVTM-----------GVDVLSHFDNWQRAGLDVGYED 383 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKE 419 + + +R + Y++A++ R L+ + E Q VD + +T +G Sbjct: 384 QTAWPVELRRARLISAVDYVQAQRARGLLATEVRHVIESQKVDAFIGNSTDWERVCVG-- 441 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 N+ G+P I +P Sbjct: 442 -------------------NLVGMPVIVIPTGF 455 >gi|290955953|ref|YP_003487135.1| amidase [Streptomyces scabiei 87.22] gi|260645479|emb|CBG68567.1| putative amidase [Streptomyces scabiei 87.22] Length = 447 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 130/490 (26%), Positives = 209/490 (42%), Gaps = 69/490 (14%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCF 82 +E+V + + ++ ++++N + V A AR A ++++R G+ L G+PI +KD Sbjct: 1 MEVVGAALDRLDRVDARLNVMVTVTADAAREQALKAEQRFAAGEELPALYGVPITVKDLT 60 Query: 83 ATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 T G+ T C D P ++ +L D G ++LGK EF E+ G Sbjct: 61 DTAGVRTTYGCVAYADHV-PDKDAAAWSRLKDAGTILLGKTTTPEFGFLGVTESKLTGTT 119 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +PW + SSGG++A+ A + + G+D GGSIR PAS G VG+KP+ G Sbjct: 120 GTPWDPARAAGG-----SSGGAAASTAAGVAPVAWGSDGGGSIRVPASLCGAVGVKPSTG 174 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R L + P + G ITR V D+A+LL A G D ++LP A Sbjct: 175 RIPHLA--NTEPDTTE-GPITRRVVDAALLLDATVGPHPLDR--LSLPATGERYAEAALA 229 Query: 262 QGMTVGIPKEYRLDYLSPTID----KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 G G+ L +D + + + L+ AGA + E TQ +P Sbjct: 230 AGDLSGLRIAADRGLLHGPVDVETQRVFAAALEDLRAAGAVVEE-----TQVEVP----- 279 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-----GFGQEVKHRIMIGTYVLSS 372 D + + + G + + + E R+ ++ R + V Sbjct: 280 ------------DPMAFAVAYWGPEYMTIVEEMRAAELDIWPLAVDMADRAARLSPVDVG 327 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG----- 427 R AR+ +T I + E F D+++TPTTP AFP + ++ Sbjct: 328 RA-------ARETKTAIYLAYAEVFAD-FDLLVTPTTPFPAFPHAGDVGGPATVNGLPLA 379 Query: 428 ----HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 H++ T + + AGLPA+SVP +P+GLQ+IG +E ++ Sbjct: 380 DPGWHLHR--LTESPSHAGLPAVSVPCGFTAGGLPVGLQIIGPQHADEA------VVSAA 431 Query: 484 AGYFRPHKWW 493 A Y R WW Sbjct: 432 ARYERATDWW 441 >gi|33603899|ref|NP_891459.1| amidase [Bordetella bronchiseptica RB50] gi|33568875|emb|CAE35289.1| amidase [Bordetella bronchiseptica RB50] Length = 427 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 212/477 (44%), Gaps = 78/477 (16%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN ++ SE+ L +D++A +L + + IE ++ A+ + AAA E D+ Sbjct: 3 LNRISASEAARLLNRRDLTAEQLARACLARIEQREPEVQAWTALRPDAVLAAARELDRGP 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I G L G+P+G+KD F T + T S I +P ++ D GA++LGK Sbjct: 63 IRGV---LHGLPLGVKDMFDTADLPTAYGSGIYQSHQPRADAAAVALCRDAGALVLGKTA 119 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA T + GP +P +TPGGSS GS+AAVA + ++GT T GS Sbjct: 120 TTEFA------TYHPGPTRNP-----RNTAYTPGGSSSGSAAAVADDMVPLALGTQTAGS 168 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 + +PA++ G VG KP++GR SR G+ S A +LD G+ R+V D A+L + DA Sbjct: 169 VIRPAAYCGVVGYKPSFGRISRAGLKSLAETLDTVGMFARSVDDVALLASVLMR----DA 224 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 L R V + + + + P +++ L AGA + E++ Sbjct: 225 RLRELRYDGTPR----------VAMFRSPQWRHTLPETRAAFERAARALSQAGAVVEELA 274 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P + GL D++ YE +++ F + + + Sbjct: 275 PPPNEDC------------------------GLAQLHSDVMA-YEAAQALAF-ERIHYPS 308 Query: 364 MIGTYV---------LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + T + L++ Y +H +A + R + + Q DV+L P+ T Sbjct: 309 QLSTKLAAMLEAGAALTAEQYLAHLAQAGQARAKVAE-----WLQRYDVLLAPSA-TGEA 362 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 P + + +F A + G+P + +P A + +P+GLQ++G FR++ Sbjct: 363 PFYDQGTG--------DPLFCRAWTLFGVPCVHLPFAQGPQGLPVGLQVVGG-FRDD 410 >gi|83717071|ref|YP_439682.1| amidase [Burkholderia thailandensis E264] gi|83650896|gb|ABC34960.1| amidase family protein [Burkholderia thailandensis E264] Length = 497 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 201/478 (42%), Gaps = 38/478 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N +NA + + A A + D + G+ A L G Sbjct: 31 IRRKDVSCVETMRAYLTHIERVNGDVNAIVALREPDVLLAEAAQKDAALARGEYAGWLHG 90 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 91 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 150 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ K G S G ++A A L A G+D GGS+R PA+F Sbjct: 151 FNEVYGATRNPY----DLTKSAGGSSGGAAAALAARMLPVAD-GSDFGGSLRNPAAFCNV 205 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ G R I F L G + RTV D A LL AGYD D + Sbjct: 206 YGFRPSQGCVPRWPSIDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPQR 265 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++LD ++G + ++ YL+ + G+ L +A + ALP Sbjct: 266 FAQSLDADLRGKRIAWVGDWN-GYLA------MEAGVLELCEASFDALRAIGCDVDAALP 318 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A+ SP + + G G ++ E +R E + + G + L + Sbjct: 319 AF---SPERIWQTWLAHRHLLSG----GSLLMHYREPSRRALLKPEAVYEVE-GLFALGA 370 Query: 373 -RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 Y++ R+ + L F + D I PT FP + ++ Sbjct: 371 VDIYEASAARSAWYQAL------ATFFERYDYIAAPT--AQVFPFDVDLRWPRTIAGRAM 422 Query: 432 DVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D + V +AG P ISVP +P+G+QLIG+P + + + EKE Sbjct: 423 DTYHRWMETVVPWTLAGCPVISVPVGFNVVGLPMGMQLIGRPRDDFAVLQLAHAYEKE 480 >gi|254391868|ref|ZP_05007062.1| secreted amidase [Streptomyces clavuligerus ATCC 27064] gi|294816213|ref|ZP_06774856.1| secreted amidase [Streptomyces clavuligerus ATCC 27064] gi|326444546|ref|ZP_08219280.1| Amidase [Streptomyces clavuligerus ATCC 27064] gi|197705549|gb|EDY51361.1| secreted amidase [Streptomyces clavuligerus ATCC 27064] gi|294328812|gb|EFG10455.1| secreted amidase [Streptomyces clavuligerus ATCC 27064] Length = 543 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 141/515 (27%), Positives = 229/515 (44%), Gaps = 61/515 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + + + + + DR R +++ +L D Y++ I N ++ A + V A + Sbjct: 46 LERMTILDIQRAMDRER---LTSEQLTDLYLKRIRALNPRLRAVVTVNPDAKGIARDSDR 102 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R +G LEGIP+ +K+ T T A S L G RP+ ++ V ++L GAV+L Sbjct: 103 RRRTDGARGPLEGIPVLLKENMNTADRQPTTAGSAALLGARPNQDAEVVKRLRAAGAVIL 162 Query: 120 GKLNMDEFAMGSSNETSYYGP-VISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLC 172 GK NM E+A ++ P ++ W ++ + + GGSS GS+AA A L Sbjct: 163 GKANMTEWA-------NFRDPRAVAGWSAVGGLTRNPYVLDRSAGGSSSGSAAAAAANLA 215 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GTDTGGSI PA T TVG++PT G SR GI+ + D G + R V D+A+ L Sbjct: 216 TVTLGTDTGGSIVDPAGLTSTVGVRPTLGVASRTGIVPISSRHDTPGPVARNVTDAALTL 275 Query: 233 KAIAG---YDECDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYL--SPTIDKTWQ 286 AIAG D A D LD+ +++G +G+ +R ++ +D+ ++ Sbjct: 276 AAIAGTDPADPDTAAAAGALPADIGEILDRGALRGKRIGV---WRAGHIGVDRDVDRVFE 332 Query: 287 QGISWLKDAGAKIVE---ISLPHT-------------QYALPAYYIISPAEASSNLARYD 330 + LK GA +VE ++ P ++ + AY +P NLA Sbjct: 333 ATVRKLKALGATVVEGADVTEPKELLGHLLPALLSEFKHDINAYLAATPGSHPENLAGL- 391 Query: 331 GVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK 390 + Y + G + ++ FGQ L Y +H A L + Sbjct: 392 -IAYNEKYRGLERMDW--------FGQMYFTEAQKNGVDLKDPAYRAHRAAATD---LAR 439 Query: 391 RDFTEAFE-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 R + + + +D I+TPT A +G + + + +VA AG P ISVP Sbjct: 440 RSIDDVLKAEKLDAIVTPTG-LPAPEVGHQAKEGDTNPFVSTTNSSVA---AGYPQISVP 495 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 A K +PLG+ +G + L E+ A Sbjct: 496 AGYTAKGLPLGVTFLGTKASDARLLGYAYAFEQAA 530 >gi|309782028|ref|ZP_07676758.1| amidase family protein [Ralstonia sp. 5_7_47FAA] gi|308919094|gb|EFP64761.1| amidase family protein [Ralstonia sp. 5_7_47FAA] Length = 491 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 132/495 (26%), Positives = 211/495 (42%), Gaps = 63/495 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKR 62 + + A+ SR R+ ++D+S VE++++++ I+ N +NA + + A+ A A E D Sbjct: 19 VQWSAIELSR-RIHARDVSCVEVMEAFLAQIDRHNPTVNAVVARIDAESAIDQARERDVL 77 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G + + G P KD AT G+ T S + P ++S V +++ G V++GK Sbjct: 78 LSQGLSGGWMHGFPQAPKDLAATAGMVTAMGSLAMARNVPTHDSIVVERIRRQGTVLIGK 137 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG + W S GGSSGG++AA+A + + G+D Sbjct: 138 TNTPEFGLGSHTYNRVYGTTRNAWNPERSA-----GGSSGGTAAALALNMLPVADGSDMM 192 Query: 182 GSIRQPASFTGTVGIKPTYGRC--SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GS+R PA++ G++P+ GR G + F L G + R +D A LL AGYD Sbjct: 193 GSLRNPAAWNNIYGLRPSLGRVPYGPTGDVFFQ-QLGTEGPMARNPQDLAWLLATQAGYD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 P +L + +++R Q I WL D G + Sbjct: 252 -----------PRAPLSLSDDPACFMQPLHRDFR------------QARIGWLGDFGGYL 288 Query: 300 ---VEISLPHTQYALPAY-------YIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 E+ L ++AL + + P A L L V G L +Y N Sbjct: 289 AIDAEV-LAVNEHALDTFDTLGCHVETVRPFFAMDALWECWCTLRALSVSGNLGL-LYAN 346 Query: 350 --TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 TR + E I G + + RA + L+ R F D ++ P Sbjct: 347 AATRDL-LKPEAIWEIEHGRSRTAIDINRAIATRASWYQALL-RQFAH-----YDFLVLP 399 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGL 461 T + FP EE+ ++ D + + +AG+PA S+P+ L +PLGL Sbjct: 400 CTQVAPFP--AEEHWPKAVAGRAMDTYHRWMEVVIGATLAGVPAASLPSGLTADGLPLGL 457 Query: 462 QLIGQPFREETLFSV 476 Q+I P E L + Sbjct: 458 QVIAPPRSEFALLQL 472 >gi|126459486|ref|YP_001055764.1| amidase [Pyrobaculum calidifontis JCM 11548] gi|126249207|gb|ABO08298.1| Amidase [Pyrobaculum calidifontis JCM 11548] Length = 400 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 127/435 (29%), Positives = 204/435 (46%), Gaps = 68/435 (15%) Query: 55 AAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWD 113 AAEE + G L G+ + +KD G+ + + R E+ V L Sbjct: 25 AAEELEALAKAGRCGKLCGLAVAVKDNIEVAGMPITNGAPYMR--RVATETAPVVAALMA 82 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GAV++GK NM E A+G++N ++GP +P D T + T G S G + A G + Sbjct: 83 EGAVVIGKTNMHELALGATNINPHFGPTRNPH---DPT-RITGGSSGGSAGAVAIG-VAD 137 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 +GTDTGGS+R PA+ G VG KP YG+ G++ A SLD G+ITR+V D ++ Sbjct: 138 VGLGTDTGGSVRIPAALCGVVGYKPPYGKLPTRGVLPLAQSLDHVGLITRSVDDLVRVMA 197 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 A+ G+ E + +P+ +R + +GI + R ++K + + + L+ Sbjct: 198 AV-GWLERE-------LPEVKRFR----FAVLMGIAENTR------HVEKAFWRAVEVLE 239 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G E+ + +YA A I +EA++N Y R + Sbjct: 240 RIGGVRDEVFVEARKYA-SARAAILLSEAAAN--------------------YYHLLRGV 278 Query: 354 G--FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G G++V + Y+ A++++ + F + F++ DV+ TPTT T Sbjct: 279 GDKMGKDVAT-----LLAAGAALPAVAYITAKQVKEEATQFFNKLFKK-YDVVATPTTAT 332 Query: 412 SAFPLGKEENNSGSMGH---IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 A P+ EE +S ++ Y ++F N+ G PAISVPA +P+GLQL + Sbjct: 333 EAIPI--EEADSVAVRPKLLAYTELF----NLTGHPAISVPAPTS--GLPVGLQLAAR-- 382 Query: 469 REETLFSVGQIIEKE 483 EE L +V ++ EKE Sbjct: 383 DEEVLLAVAKMYEKE 397 >gi|262203935|ref|YP_003275143.1| amidase [Gordonia bronchialis DSM 43247] gi|262087282|gb|ACY23250.1| Amidase [Gordonia bronchialis DSM 43247] Length = 469 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 144/490 (29%), Positives = 226/490 (46%), Gaps = 42/490 (8%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 +M+ +E RS ++S +V ++ I + ++NA+ V A + AAA S +R Sbjct: 7 WMSATELAAGYRSGEVSPESIVGGLLETINAVDPEINAFCLVDADASVAAARASAERFAA 66 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHIL--DGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L+G+P+ IKD TKG T S ++ D ++ +L + GAV+LGK+ Sbjct: 67 GNPLGPLDGVPVSIKDLLLTKGWPTLRGSLMIEPDDLEWDVDAPAVARLREAGAVLLGKV 126 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 EF ++ G +PW D+T T GGSSGGS+AAVA L S+GTD GG Sbjct: 127 TTPEFGWKGVTDSPRTGITRNPW---DTTR--TSGGSSGGSAAAVAAGLGPLSVGTDGGG 181 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+F G VG K T GR FAP + G + RTV D A+LL I+G+D D Sbjct: 182 SIRIPAAFCGIVGFKATLGRVPMYPPSPFAP-VAHVGPMARTVADVALLLDTISGFDPRD 240 Query: 243 ATCVNLPVP----DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 LP P A + G+ +G + + Q ++ L+ GA+ Sbjct: 241 WAA--LPTPADSAAAAVASTTDLAGLRIGYSPDLTFGTNDAGVHANTDQVVAVLEQLGAE 298 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + ++ L + + AY+++ A A++ + G RV+ +LE E R I Sbjct: 299 VEKVDL-GWEDPVWAYHVLWYAGAAAVVGAL-GPAADERVD-PLLLEAIERHRDI----- 350 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + YL A +R + EQ DV++TP+ P+ AF G+ Sbjct: 351 ----------------TSADYLDAVALRMELGTQMGRLHEQ-FDVMITPSMPSVAFEAGR 393 Query: 419 EENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + + +T N+ G PAI+VP+ + ++P G+Q++G + T+ V Sbjct: 394 TVPDGWESPEWTSWSPYTYPFNLTGQPAITVPSGF-DGRLPTGVQIVGARHHDATVLRVA 452 Query: 478 QIIEKEAGYF 487 E G F Sbjct: 453 ATYENAVGGF 462 >gi|163734300|ref|ZP_02141740.1| amidase, putative [Roseobacter litoralis Och 149] gi|161392308|gb|EDQ16637.1| amidase, putative [Roseobacter litoralis Och 149] Length = 460 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 207/470 (44%), Gaps = 57/470 (12%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGI 78 +I V+L +Y+ AI + Y V A++A A + R +G R L +G+PI Sbjct: 38 EIDPVDLTQTYLDAISAHPLRDRIYARVTAERALNEAAAARDRARSGQRRSLLDGVPISW 97 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SNETS 136 KD F T G+ T++ S +L P ++ V Q G V LGK +M E A N ++ Sbjct: 98 KDLFDTAGVATESGSLLLKDRVPDQDAQVLQNATAAGLVCLGKTHMSELAFSGLGYNPST 157 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 P ++ + PGGSS G++A+VA L A +G+DTGGS+R PA++ VG+ Sbjct: 158 ATPPCVN-------DEGAVPGGSSSGAAASVAFDLAAVGVGSDTGGSVRIPAAWNDLVGL 210 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G++ A D G + R+V D+A++L + G D + Sbjct: 211 KTTSGRLSLEGVVPLAARFDTVGQLCRSVEDAALMLAVLQGGRAADLS------------ 258 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 S+ G + + ++ + + + +S L+ AGA+I EI + A+ Sbjct: 259 -GASLVGRRLAVLNTIAMEDVRSGPAEAFSTAVSKLEQAGAQIEEIHIDAVNDAMALTTC 317 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + AEA YGL +D++E + QE+ R +G Sbjct: 318 LYTAEA-----------YGLW---RDVIEANPD----AMYQEILKRFRLG-----QNHSG 354 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 Y+ A + + +A G D ++ PT P P N+ ++ ++ ++ Sbjct: 355 PDYVAAWAALEAARVSYHQA-TAGFDAVILPTAPI--LPPNLNRLNTDHDYYVTENLMSL 411 Query: 437 AV----NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 N+ GL A+S+P GL L+ P REE+L +G E+ Sbjct: 412 RNTRIGNLMGLCALSLPT----DTPSCGLMLMAPPHREESLLRLGTAAER 457 >gi|302808515|ref|XP_002985952.1| hypothetical protein SELMODRAFT_234908 [Selaginella moellendorffii] gi|300146459|gb|EFJ13129.1| hypothetical protein SELMODRAFT_234908 [Selaginella moellendorffii] Length = 497 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 133/505 (26%), Positives = 229/505 (45%), Gaps = 57/505 (11%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-- 66 V + ++ L++ +++ +LV+ YI I N Q+ A IEV A E R +G Sbjct: 23 VEDIQEALKAGTLTSKQLVEFYIARITRLNPQLKAVIEVSPDALELANEADTYRKQHGAE 82 Query: 67 DARDLEGIPIGIKDCFATKG-IHTQACS-HILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + L GIPI +KD ATK + T A S ++D P ++ V +KL D GA++ GK N+ Sbjct: 83 SCKGLRGIPILLKDNIATKDKLQTTAGSLALVDSIVPR-DAGVVKKLRDAGAIIFGKANL 141 Query: 125 DEFAMGSSNETSYY-----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+ S E + G ++P+ + +T F SS GS+ V+ + ++GT+ Sbjct: 142 SEWMYFRSTEAPHGWSPRGGQTMNPYDPVQTT--FG---SSSGSAVGVSANMATVTLGTE 196 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PASF VGIKPT G SR G+I + ++D G I RT++D+ +L I G D Sbjct: 197 TDGSIINPASFAAVVGIKPTVGLTSRAGVIPLSHNMDSVGPICRTMKDAVEVLDVIVGVD 256 Query: 240 ECD----ATCVNLPVPDYERALDQS-IQGMTVGI--PKEYRLDYLSPTIDKTWQQGISWL 292 + D A +P Y++ L + ++G +G+ K + +D +S ++K + I+ Sbjct: 257 DLDSATTAAAAYIPRGGYKQFLKRDGLRGKRLGVLAGKYFVIDEISGDMEKLFSLAIAR- 315 Query: 293 KDAGAKIV-EISLPHTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEG-KDIL---E 345 GA IV ++ LP+ + + ++ + +L +Y +V +D++ E Sbjct: 316 ---GAVIVKDLELPNAEEIVSTKNEDLVLQIDFKHDLQKYLSELTTSKVRSLEDVIRFNE 372 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 + + + FGQ+V S+ Y R + + E G+D +L Sbjct: 373 EHTDEKLDRFGQDVFIEAQARQEDQQSQAYKDALARNKFLT-----------ENGIDYLL 421 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLI 464 + + + ++ +AG PAIS+PA P G+ + Sbjct: 422 ------------QTHDLHALVAPTAVSAISLTAAIAGYPAISIPAGYAPPTGFPFGICFL 469 Query: 465 GQPFREETLFSVGQIIEKEAGYFRP 489 G E L + +E+ + P Sbjct: 470 GNKGSEGVLIEIAYALEQASNIRHP 494 >gi|167616250|ref|ZP_02384885.1| amidase [Burkholderia thailandensis Bt4] gi|257142820|ref|ZP_05591082.1| amidase [Burkholderia thailandensis E264] Length = 484 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 201/478 (42%), Gaps = 38/478 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIINGD-ARDLEG 73 +R KD+S VE + +Y+ IE N +NA + + A A + D + G+ A L G Sbjct: 18 IRRKDVSCVETMRAYLTHIERVNGDVNAIVALREPDVLLAEAAQKDAALARGEYAGWLHG 77 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P KD TKGI T S I P ++ V +++ GAV +GK N EF +GS Sbjct: 78 MPQAPKDLAMTKGIVTTLGSPIFRTMTPSVDAIVVERMRAAGAVFIGKTNTPEFGLGSHT 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 YG +P+ K G S G ++A A L A G+D GGS+R PA+F Sbjct: 138 FNEVYGATRNPY----DLTKSAGGSSGGAAAALAARMLPVAD-GSDFGGSLRNPAAFCNV 192 Query: 194 VGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +P+ G R I F L G + RTV D A LL AGYD D + Sbjct: 193 YGFRPSQGCVPRWPSIDVFVQQLGTEGPMGRTVVDVAQLLAIQAGYDRRDPLSLAEDPQR 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++LD ++G + ++ YL+ + G+ L +A + ALP Sbjct: 253 FAQSLDADLRGKRIAWVGDWN-GYLA------MEAGVLELCEASFDALRAIGCDVDAALP 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 A+ SP + + G G ++ E +R E + + G + L + Sbjct: 306 AF---SPERIWQTWLAHRHLLSG----GSLLMHYREPSRRALLKPEAVYEVE-GLFALGA 357 Query: 373 -RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 Y++ R+ + L F + D I PT FP + ++ Sbjct: 358 VDIYEASAARSAWYQAL------ATFFERYDYIAAPT--AQVFPFDVDLRWPRTIAGRAM 409 Query: 432 DVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 D + V +AG P ISVP +P+G+QLIG+P + + + EKE Sbjct: 410 DTYHRWMETVVPWTLAGCPVISVPVGFNVVGLPMGMQLIGRPRDDFAVLQLAHAYEKE 467 >gi|329115689|ref|ZP_08244411.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum DM001] gi|326695117|gb|EGE46836.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum DM001] Length = 453 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 125/491 (25%), Positives = 212/491 (43%), Gaps = 60/491 (12%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRI 63 +F ++ + L +A +LV++ + I + + ++ V A AR A+ D+ Sbjct: 4 SFSSMFHAAQALADNRTTARKLVENALDNIAEPHGEGARTFVSVHATAARRQADAIDRLR 63 Query: 64 INGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGK 121 G A L G+PI +KD F G T+A S +L P ++ ++L G + +G+ Sbjct: 64 CQGQAPSPLAGLPISVKDLFDEAGSITRAGSMVLADAPPASMDAPAIERLKQAGLISIGR 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 M EFA ++G +PW + K PGGSS G++ +V+ + IG+DTG Sbjct: 124 TTMTEFAFSGIGINPHFGTPANPWHRHE---KHIPGGSSSGAAISVSDNMAFVGIGSDTG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA+ TG VG KPT R S G + + +LD G I RTV K D Sbjct: 181 GSCRIPAALTGLVGFKPTARRISTKGTVPLSSTLDSIGSIGRTV-------KCCWATDSL 233 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT L + D + S + +GI ++ + T+ TW+ + L G + Sbjct: 234 MATG-TLRIQDAPTGREGST--LRLGILSTSVMEDMDDTVAHTWENCLRRLSKNGIMLET 290 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P + +P A+ +LA + + +LE +H Sbjct: 291 FTCPPLK-EIPQANSKGGFPAAESLAWH-----------QPLLE--------------RH 324 Query: 362 RIMIGTYVLSS--RCYDSH---YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 R + +VL R Y+ + Y+ R+ RT + + + D ++ PT P A + Sbjct: 325 RSVYDPFVLQRILRGYEQNAVDYISLRQSRTKLIQQAADIMNH-YDAVILPTVPIIAPKI 383 Query: 417 GKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFRE 470 +N+ ++ ++ T N L AIS+P C + + P+GL ++G+ + Sbjct: 384 SDMHDNT---RYVATNLLLLRNTTIANFLDLCAISLP---CHQMGEAPVGLMVMGRHAED 437 Query: 471 ETLFSVGQIIE 481 LF + IE Sbjct: 438 HILFRIAAQIE 448 >gi|170741344|ref|YP_001769999.1| amidase [Methylobacterium sp. 4-46] gi|168195618|gb|ACA17565.1| Amidase [Methylobacterium sp. 4-46] Length = 469 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 134/472 (28%), Positives = 200/472 (42%), Gaps = 41/472 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + + R +S E+V + I +NA++ V A+ A A A ES+ Sbjct: 1 MTEIRHLDGAALAARYSDGALSPREVVADSLARIAAHEPAINAFVLVDAEAALARAAESE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G R L+GIP+ IKD A G + S + T++L + GA+ L Sbjct: 61 ARWRAGTPRGPLDGIPVTIKDNIAWAGHPMRRGSPTTSPEPLAASAPATERLLEAGAIPL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M EF +++ GP +PW +T SS G++AA A L A +GTD Sbjct: 121 GKTTMPEFGWKGLGDSTLTGPTRNPWDLSRTTGG-----SSAGAAAAAALDLGLAHLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GSIR PA+F G G+KP+YGR F P + G + R V D+A++L+AIA D Sbjct: 176 GAGSIRIPAAFCGVFGLKPSYGRVPAYPPSPFGP-VAHLGPLARRVSDAALMLRAIARPD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY---LSPTIDKTWQQGISWLKDAG 296 D PDY L ++G+ + RL Y + P ++ + S + G Sbjct: 235 ARDMLAWLSEPPDYAAGLAAGVRGLRIAW--SPRLGYAARVDPEVEALTARAASAFAELG 292 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A + E A P + P E + G ++ + R+I Sbjct: 293 ATVEE--------ADPGF--ADPVET---------------LNGIWLVGAWSVLRTIPEA 327 Query: 357 QE-VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 Q + SR +L A R I F D++LTP A P Sbjct: 328 QRGAVEPALRAAAERGSRISAPDFLAALNARAAIFTAMAR-FHARYDLLLTPAVAVPALP 386 Query: 416 LGKEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +G+ GS G + F+ N+ G PA SVP L +P+GLQ++G Sbjct: 387 VGRLTPADGSEGDDWLAWTPFSYPFNLTGQPAASVPCGLSAAGLPVGLQIVG 438 >gi|158424317|ref|YP_001525609.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331206|dbj|BAF88691.1| amidase family protein [Azorhizobium caulinodans ORS 571] Length = 463 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/478 (25%), Positives = 201/478 (42%), Gaps = 47/478 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 R++ +S E D+ + + S ++ A ++ RA A S R L+G+ Sbjct: 16 FRARRLSPSEYFDALLPYVAASEPKLGALYAFEPERVRAEAAASTARWAKSAPNGPLDGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +K+ AT+G+ + D ++ ++ + GA++L K + ++ M SS Sbjct: 76 PVTLKELIATEGLPVPLGTAATDLVPATADAPPAARMKEAGAILLAKTTVPDYGMLSSGL 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S++ +PW PGGSS G++AA A +GTD GGS+R PA + G V Sbjct: 136 SSFHTLARNPWNL-----ACNPGGSSAGAAAAGAAGYGPLHVGTDIGGSVRLPAGWCGLV 190 Query: 195 GIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KP+ GR I P AG +TRTV +SA++++ +A D DAT + D Sbjct: 191 GFKPSLGR------IPIDPYYVGRCAGPMTRTVAESALMMQFLAKPDWRDATSLPPEDID 244 Query: 253 YERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + S++G+ +G+ E + + K + + GA+IV Sbjct: 245 WMDLEGMSVKGLRIGLMLEAGCGMDVEDEVRKAVEAAARRFEAEGAEIV----------- 293 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 PA A DG+ R D + + R + Y++ Sbjct: 294 -------PAPGVLTRAMLDGLDDFWRARSWDDISALPPEK----------RAKVLPYIVD 336 Query: 372 SRCYDSHYLRARKIR----TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 +H R +R T+ R G+D +LTPT SAFP + Sbjct: 337 WAAGGAHVDGPRAVRGFNQTMKMRQACATLFHGLDYLLTPTNNVSAFPAEWASPVNDPAK 396 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + FTV NM+ PAIS+ + MP+GLQ++G F + + + + E G Sbjct: 397 PFEHICFTVPWNMSEQPAISINCGFTQAGMPIGLQIVGPRFADHAVLRIAHLYEGWRG 454 >gi|329915113|ref|ZP_08276212.1| amidase [Oxalobacteraceae bacterium IMCC9480] gi|327544981|gb|EGF30316.1| amidase [Oxalobacteraceae bacterium IMCC9480] Length = 529 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 148/506 (29%), Positives = 228/506 (45%), Gaps = 52/506 (10%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V++ + +RS +S+ L Y I+A + S +NA IE A +R Sbjct: 37 VAQLQAAMRSGALSSRTLTAHYLARIKAFDKSGPHLNAVIERNPDALAIAGALDAERKAT 96 Query: 66 GDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIP+ IKD AT + T A S L G + ++ + +L GAV+LGK N+ Sbjct: 97 GPRGPLHGIPVLIKDNIATADAMQTTAGSFALVGAKAPRDAFLVTQLRAAGAVILGKTNL 156 Query: 125 DEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 E+A + S+ TS + R+ + D+ T GSS GS+AA+A L A ++GT+T GS Sbjct: 157 SEWANIRSTRSTSGWSARGGLTRNPYALDRNT-SGSSSGSAAAIAASLAAIAVGTETDGS 215 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 I PAS G VG+KPT G SR GII + S D G +TR+V D+A+LL A+ G D DA Sbjct: 216 ITSPASICGLVGLKPTVGLISRDGIIPISHSQDTPGPMTRSVADAAVLLGAMTGVDARDA 275 Query: 244 TCVNLP--VPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DY R LD ++G +G+ R + P + + LK GA ++ Sbjct: 276 ATAGSAGKARDYTRFLDADGLRGARIGVVTNARSSH--PAVQDIADAALLVLKARGAILI 333 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ LP N+++Y D + E K L Y G G V Sbjct: 334 DVELP-------------------NISKYGDSELEVMLYELKADLNAY--LAEFGQGAAV 372 Query: 360 KHRIMIGTYVLSSR-----CYDSH-YLRARKIRTLIKRDFTEAF--------EQGVDVIL 405 + + + L R +D +LRA L +++ +A +G+D +L Sbjct: 373 RSLKDVIAFNLIHRPIEMGFFDQELFLRAEAKGGLDSQEYRDALANNQRYSRAEGIDQVL 432 Query: 406 TPTTPTSAF-PLGKEE--NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 T + F P G + + H Y + F+ +AG P I+VPA +P+G+ Sbjct: 433 TEFKLDALFAPTGGPAWLTDPVNADH-YGESFSSPAAVAGYPHITVPAGYV-AGLPVGVS 490 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFR 488 + + E L + E+ + R Sbjct: 491 FVAGAYAEGMLIKLAYAYEQATRHRR 516 >gi|254455546|ref|ZP_05068975.1| amidase [Candidatus Pelagibacter sp. HTCC7211] gi|207082548|gb|EDZ59974.1| amidase [Candidatus Pelagibacter sp. HTCC7211] Length = 442 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 133/511 (26%), Positives = 218/511 (42%), Gaps = 100/511 (19%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI----EVVAQKARAAA 56 M+++ + V E +++ +++VE+ + YI+ I + A++ +++ +KA+ Sbjct: 1 MTDIFSLKVEEIVSKIKDAQLTSVEICEKYIERINKFEKDVKAWVYFDKKLLLEKAQ--- 57 Query: 57 EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 E D R L GIPI +KD T + T+ + I G + + L GA Sbjct: 58 EADDHRRAGKPTGPLHGIPIALKDIIGTIDMPTECGTPIRKGKSYSQNAEIIDLLLSAGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAAS 175 +++GK E A + P ++ + D TPGGSS GS+A+VA F+ S Sbjct: 118 IVMGKTATSELAF------------LGPSKTTNPHDYTRTPGGSSSGSAASVASFMAPLS 165 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IG+ TGGS+ +PAS+ G VG KPTYG SR G++ + LD G+ R+V D A+L K + Sbjct: 166 IGSQTGGSVIRPASYCGVVGYKPTYGLISRNGVLKTSEKLDHIGVFGRSVEDVALLAKVL 225 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK--EYRLDYLSPTIDKTWQQGISWLK 293 D D ++ D L ++ +G PK Y+ D I+K + + Sbjct: 226 IKKDNQDKATIHYSSED---MLIETKKGPLFE-PKFIFYKTDNWK-LIEKKSRDAFEYFI 280 Query: 294 DAGAKIVEISLPHTQYALPAYY--------IISPAEASSNLARY-------------DGV 332 + K +E+ + P+Y+ II + ++N Y D + Sbjct: 281 KSFKKNIEV------FDTPSYFKDIHKYHQIIHETDLANNFGLYYKKYKKKLSKYMQDAI 334 Query: 333 RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 G + KD E +I F + R YDS Sbjct: 335 VKGNKHSAKDYAE------AIDFMK---------------RSYDS--------------- 358 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 + E FE +LTP++P A P G + + ++ + G P IS+P Sbjct: 359 YEEVFED-YHGVLTPSSPGVA-PKGLKSTGTAEFNKVW--------SYLGTPCISLPLLQ 408 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 E MPLG+QL+G + + V +EKE Sbjct: 409 GENNMPLGVQLVGARYDDHRFLGVANWLEKE 439 >gi|254439725|ref|ZP_05053219.1| Amidase, putative [Octadecabacter antarcticus 307] gi|198255171|gb|EDY79485.1| Amidase, putative [Octadecabacter antarcticus 307] Length = 529 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 142/518 (27%), Positives = 224/518 (43%), Gaps = 45/518 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + +L + ++ RD L + +A +L + + I N++ NA I V + A A D Sbjct: 15 LPDLEALTITIIRDGLAAGVFTAEDLTRACLAQINALNARYNAII-FVNEAAIDTARGID 73 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWD 113 +R G+ L G+P+ IKD T G T A +L P ++ V ++ Sbjct: 74 RRRDAGEKLGPLAGVPVVIKDPMDTVGFPTTAGWKLLYSKTGGVDLMPATDAPVVARMRA 133 Query: 114 NGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 AV+LGK N+ + GS S+ GP I+ + PGGSS G++AAVA +C Sbjct: 134 ADAVILGKTNVPVLSHTGSHANDSWAGPTIN-----VVLEDRVPGGSSAGTAAAVAANMC 188 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 + +TGGSI+ PAS G VGIKPT G G++ + + D G I R V D+A+ L Sbjct: 189 VVGLAEETGGSIQNPASAHGLVGIKPTMGLVPNAGVVPLSSNRDVVGPIARNVTDAALCL 248 Query: 233 KAIAGYDECD----ATCVNLPVPDYERALDQ-SIQGMTVGI-PKEYRLDYLSPTIDKTWQ 286 +AGY D A+ +P Y L + S++G +G+ +R LS + Sbjct: 249 DVLAGYSGEDPKTLASVGKVPKGGYAANLSKDSLKGKRIGLYGPGWREQNLSAETAALYD 308 Query: 287 QGISWLKDAGAKIVEISLPHTQYAL---PAYYIISPAEASSNLARYD-GV---RYGLRVE 339 + S L DAGA ++ T +A P + + + YD GV R G Sbjct: 309 RAQSELIDAGAILIPDPFAGTDFAALREPTFPLQNFDARGMESVAYDLGVYLRRLGPDAA 368 Query: 340 GKDILEMYENTRSIG-FGQEVKHRIMIGTYVLSSRCYD-------SHYLRARKIRTLIKR 391 K + E TR+ FG + + D H++ A+ I Sbjct: 369 LKSFDDFSEATRAEDPFGPGGVLSFLPNMPDFRAAMVDPTQAPALPHFIAAKSAYLAIFD 428 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 D + E +D ++ FP +EE G + +N+AGLPAI+VPA Sbjct: 429 DVLDQHE--LDALV--------FPQMREELPELHSGETIQETTVGELNIAGLPAITVPAG 478 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 P + +G+ + E +L ++ E+ Y +P Sbjct: 479 YYASGAPFEIIFLGKLWSEPSLIALAFAYEQVTLYRKP 516 >gi|330957897|gb|EGH58157.1| amidase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 470 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 126/499 (25%), Positives = 210/499 (42%), Gaps = 55/499 (11%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRI 63 N + + E LR +++V L++ Y+Q I N Q+NA I++ A + R A E+D+ Sbjct: 7 NTLTLREMAGLLRRGVLTSVNLLEFYLQRIAERNPQINALIQLESADELRRQAREADEMA 66 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ R L GIP+ IKD +G L G ++TV +L + GA++LG Sbjct: 67 RIGNIRGPLHGIPMTIKDVCHVRGFRMSRGLEELLGAASQEDATVVARLREAGAIILGIT 126 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E M + YG ++P S GGSSGG +AA+A A + +D G Sbjct: 127 NVPELCMAFETDNLLYGRTLNPCDPQRSA-----GGSSGGEAAAIAAGCSPAGLASDACG 181 Query: 183 SIRQPASFTGTVGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+R PA F G G+K T GR R G+ + G++ R V D +L + Sbjct: 182 SVRIPAHFNGICGLKLTQGRVPLTGQFPNDRSGLFHLTSAF---GVMGRYVDDLELLGQL 238 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 I+G D D V++P D + + + V + E +SP + + QQ + L Sbjct: 239 ISGADGHDPDTVDVPFND-----SKPLAELRVALSWESARTEVSPALKQVLQQVEACLGS 293 Query: 295 AGAKIVEISLPHTQYALPAYY--IISPAEASSNLAR-YDGVRYGLRVEGKDILEMYENTR 351 A + + P A + I+ A+A + + + + L Sbjct: 294 VVADVTSTTPPMLDEASDVLWRVFITGADAGRSWKKLFASMNKQTYTPATSELIRLSEEV 353 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 + + + IMI T+ + + F Q D+ + P P Sbjct: 354 ELSVDEMKRDWIMIDTF---------------------RYQLAQFFNQH-DLFICPVFPD 391 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFRE 470 AF G+ + S F +++G PA+ + A MP+G+Q+IG ++E Sbjct: 392 VAFAHGESLLDRDSYA------FVFPFSLSGSPAVVIRAGHDPVSGMPIGIQIIGPHWQE 445 Query: 471 ETLFSVGQIIEKEAGYFRP 489 + L +V +E+E + P Sbjct: 446 KRLLTVANFLEREMTRWSP 464 >gi|307727955|ref|YP_003911168.1| Amidase [Burkholderia sp. CCGE1003] gi|307588480|gb|ADN61877.1| Amidase [Burkholderia sp. CCGE1003] Length = 458 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 113/422 (26%), Positives = 180/422 (42%), Gaps = 55/422 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD T + T+ S G RP ++ V +L GA ++GK EFA Sbjct: 77 LAGVPVAVKDVIDTADMPTEFNSPAYKGRRPEQDAWVVARLRAAGASIIGKTVTTEFAWR 136 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 GP ++PW D FTPGGSS GS+AAVA + ++GT T GS+ +PA++ Sbjct: 137 KP------GPTVNPWN-----DGFTPGGSSSGSAAAVAAGIVPLALGTQTQGSVIRPAAY 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KPTYG +R G++ A SLD G+ V D A L I G D D ++P Sbjct: 186 CGIVGFKPTYGAIARTGVLPLAWSLDHVGMFATNVADVAYALALITGVDAADPHVSHIP- 244 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + +G+ ++ + P + + L G +IV++ Sbjct: 245 --QSATTARGTSTRRIGVLRKQAGGDIDPAQQAALDRLAAQLAQDGVEIVQVD------- 295 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVE------GKDILEMYENTRSIGFGQEVKHRIM 364 LPA +PA A ++ + +G V+ + + + E RS+ V RI Sbjct: 296 LPAEIFETPAHALKLMSVEAAITHGGLVDRTPELVSEAMRGLVEEGRSL--PATVYARIK 353 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 ++ R +D RA + L+ T +G+D Sbjct: 354 AAQMPMAHRFHD-WLTRAMALDALLVAPATGEPPRGLD---------------------- 390 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + + F G+PA++VP +PLG QL+G R+ L ++ + +E Sbjct: 391 ---YTGDASFCAPWTFLGVPAVTVPVGFGPAGLPLGAQLVGTAHRDADLLTLAEWVEART 447 Query: 485 GY 486 G+ Sbjct: 448 GW 449 >gi|149179233|ref|ZP_01857798.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Planctomyces maris DSM 8797] gi|148841912|gb|EDL56310.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Planctomyces maris DSM 8797] Length = 430 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 130/481 (27%), Positives = 213/481 (44%), Gaps = 70/481 (14%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 ++++ L++ ++S EL+ Q IE ++A+ + + A A+ D+ + G R Sbjct: 1 ADAQQALKAGELSCRELLTECFQNIEEKEPAIHAWAHLDREAAFQRADLLDQELQRGRWR 60 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPIG+KD KG+ TQA D ++T+ + L GA+ GK + A Sbjct: 61 GPLHGIPIGVKDIIDVKGMPTQAGFLGRDKPPATNDATLVENLRMEGAIFPGKTVTTQLA 120 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 P +PW + TPGGSS GS+AAVA +C A++GT TGGSI +PA Sbjct: 121 SFDPP------PTRNPWNQ-----EHTPGGSSSGSAAAVAAGMCLAAVGTQTGGSIIRPA 169 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G G+KPT+G R G+I + LD G + TV D I+L + Sbjct: 170 AFCGVAGLKPTFGMVDRQGVILLSDHLDHVGPLAHTVSDLVIMLDGMT------------ 217 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD----AGAKIVEISL 304 D L I+ +T + D+ + QQ ++ +++ AGA I + L Sbjct: 218 ---DQATYLPLLIEPVTAAPRIGWLSDFFITRAEPDMQQALTVVREKLAAAGAPIKDSRL 274 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P T++ S + +L +Y+ L G D Y+ R +G + + Sbjct: 275 P-TEFE-------SILDEHLSLMQYE----MLHQLGDD----YDQNREY-YGPAISQVLE 317 Query: 365 IGTYVLSSR---CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 G V S R C D L I + +R F A +++++P T F + Sbjct: 318 AGREVSSKRYQACLDYQSL----IGQITRRCFARA-----EILISPAT----FGPAPDLT 364 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G+ G ++ G P +++PAA+ +P+G+Q+ G P + + L Q E Sbjct: 365 TTGNPG------MNAPWSLTGFPTLTIPAAVTAGGLPVGIQITGHPDKFDDLLLASQWCE 418 Query: 482 K 482 Sbjct: 419 N 419 >gi|327306650|ref|XP_003238016.1| amidase [Trichophyton rubrum CBS 118892] gi|326458272|gb|EGD83725.1| amidase [Trichophyton rubrum CBS 118892] Length = 571 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 14/299 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 +D L ++V+LV +Y+ I NS + A E+ A + ++R + L Sbjct: 74 QDGLTKGCFTSVDLVKTYVARIAEVNSTVRAVTEINPDALTIAKQMDNERKMGKLRGPLH 133 Query: 73 GIPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--- 128 G+PI IK+ F + + A S+ + G R ++TV KL + G V++GK ++A Sbjct: 134 GLPIVIKNNIFTDDRMSSTAGSYAIFGARTSADATVATKLREAGLVIMGKSGASQWANFR 193 Query: 129 -MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + S+N S YG ++ + P GSS GS A L A++GT+T GSI P Sbjct: 194 SINSTNGWSAYGGQVTAAYIKNQD----PSGSSSGSGVASDLGLAFATLGTETSGSIVSP 249 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A + VG+KPT G SR ++ + D G +TR+V+D+A LL+ IAG D D Sbjct: 250 ADKSNIVGLKPTVGLTSRRFVVPISERQDTVGPMTRSVKDAAYLLQVIAGKDSNDNYTSA 309 Query: 248 LP---VPDYERALD-QSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVE 301 +P +PDY +A D +++G +G+P+ + SP T+ + Q + +K AGA IVE Sbjct: 310 IPFDTIPDYVKACDINALKGKRIGVPRNVIKIFGSPKTVVDQFNQALEVMKKAGAIIVE 368 >gi|116696062|ref|YP_841638.1| amidase [Ralstonia eutropha H16] gi|113530561|emb|CAJ96908.1| Amidase [Ralstonia eutropha H16] Length = 451 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 115/419 (27%), Positives = 184/419 (43%), Gaps = 54/419 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAM 129 L G+P +K +G T A + P T + L GAV + MDE+A Sbjct: 70 LAGVPFVVKSLLDVRGHATLAGAAPRAQEPPALRHADTVEALVAAGAVPVALAAMDEYAC 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ E GPV +P +D + + T GGSS G++A VA + +G+DT GSIR PA+ Sbjct: 130 GATGENVIGGPVRNP---LDPS-RIT-GGSSAGTAALVAAGVVPFGLGSDTNGSIRAPAA 184 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G++PT GR S G + +A SLD G + + D A+ A+ G D P Sbjct: 185 FCGIWGLRPTTGRLSLAGCVPYAQSLDTVGPMAGSACDLALAYAAMLGVDA--------P 236 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 R + VG+ D+ P + Q + + A + I LP Sbjct: 237 ADPQGRGAAT----LRVGVLGRGFSDFAEPAV----QAAVLRVASAFGAVRTIDLPDADS 288 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + A +IS E G++ M + R G+ V+ RI+ G Sbjct: 289 SRDAASVISAYEV-----------------GRNHQAMGFSERHGGYSAFVRQRILAG-LA 330 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + YD AR+ ++ ++ F+ VD++L P+TP +A P+G + N G I Sbjct: 331 MPRGWYDI----ARQYQSAWRQRLLALFDD-VDLLLAPSTPYAATPIGADTVN--GTGRI 383 Query: 430 Y-----NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y T +++AGLP ++ P A + +P G+Q++ P E + + +E + Sbjct: 384 YCPRADAGHLTRPLSLAGLPVVAAPCA--GEGLPAGIQIVAAPGLESQALAAARFLEAQ 440 >gi|306842156|ref|ZP_07474825.1| amidase [Brucella sp. BO2] gi|306287743|gb|EFM59174.1| amidase [Brucella sp. BO2] Length = 471 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/428 (28%), Positives = 188/428 (43%), Gaps = 69/428 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S + P ++ + Q+L + GAV++GK +M EFA Sbjct: 79 LDGRIVSIKDLFDVAGEPTLAGSVVRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEFAF 138 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D PGGSS G++ +VA +IG+DTGGS+R PA+ Sbjct: 139 TPVGLNPHYG---EPGNAIDPAR--IPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL A+ ++ P Sbjct: 194 LNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVAD-AILTDAVMAGEK--------P 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +P AL ++G+ + +PK+Y L + + ++ ++ L+ AGA I ++++ Sbjct: 245 IP--PEAL--PVKGLRIALPKDYLLADMELDVAAHFEASLATLEKAGAIIADLAVDDLIG 300 Query: 310 ALPAYYII--------SPAEASSNLARYDG-----VRYGLRVEGKDILEMYENTRSIGFG 356 L I S AS+ LA D V+ L V K LE Y Sbjct: 301 RLKEATCIGSIAGIEASHIHASTWLADPDANVDIRVKRPLSVRMKVPLEAY--------- 351 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 H +M + R + R+ E G D+ TP TP A + Sbjct: 352 ----HALM-------------------ETRKALAREMDERL-SGFDMFATPATPIVAPTI 387 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ + + + T N L +I++P + + K+P GL L + ++ L Sbjct: 388 ASVSHDEEEYDRVESLLLRDTQVANQFDLCSITLP--MPDMKLPTGLMLTARNGSDKRLL 445 Query: 475 SVGQIIEK 482 + +EK Sbjct: 446 AAALSVEK 453 >gi|134293114|ref|YP_001116850.1| indole acetimide hydrolase [Burkholderia vietnamiensis G4] gi|134136271|gb|ABO57385.1| Amidase [Burkholderia vietnamiensis G4] Length = 473 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 127/488 (26%), Positives = 210/488 (43%), Gaps = 64/488 (13%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D +R AV++ D + + + + +NA + V A+ R AE D RI GDA L G Sbjct: 24 DAVRHGACRAVDVADDALARVA-AIAPLNAMVHVDAELGRRTAERIDARIAQGDALLLAG 82 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD T + T S ++G+R +++ ++L D GAV LGK NM E A G ++ Sbjct: 83 VPFVIKDNLDTADMPTLGASPAVNGYRATHDALTVRRLLDAGAVPLGKANMHELAFGITS 142 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA---SIGTDTGGSIRQPASF 190 +G V +P P +GGSS A + A +GTDTGGS+R PA+F Sbjct: 143 GNRQFGAVGNP---------HEPRRIAGGSSGGTAAAVAAGIPFGLGTDTGGSVRIPAAF 193 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G++P+ R S G++S + + D G I R + D +L + D A Sbjct: 194 CGVYGLRPSVQRYSSHGVLSLSHTRDTVGPIARHIDDLLLLDAVLTRDDGIAAA------ 247 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 P + + + +G+P D L P + ++ ++ AGA +V + A Sbjct: 248 PGWSQ--------LRIGVPAAPYFDELDPGVAACIERALASCAAAGATLVPLPARQLHDA 299 Query: 311 LPAY-YIISPAEASSNLARYDGVRYGL-------RVEGKDILEMYENTRSIGFGQEVKHR 362 A + I+ EA+ R+ R G+ R+ D+ ++ + Sbjct: 300 SEACGFPIAAFEANLYWRRFATQRLGIPFDTFVERIASDDVRAIFRS------------- 346 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 +S+ Y R I R + +AF VD I PT P PL ++ Sbjct: 347 ------FVSAPIDAQSYADGLDWRRRIVRWYDDAFGTPVDCIAMPTVPGEP-PL--LDDT 397 Query: 423 SGSMGHIYNDVF------TVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFS 475 + +F T ++AG+P++S+PA + +P+GL L G + L + Sbjct: 398 AAMTAAQDAALFARVARQTSPASLAGVPSVSLPAGRSAQTGLPVGLMLEGPWGGDRRLLA 457 Query: 476 VGQIIEKE 483 + ++ Sbjct: 458 IAARVDAR 465 >gi|134081732|emb|CAK48521.1| unnamed protein product [Aspergillus niger] Length = 481 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 139/274 (50%), Gaps = 43/274 (15%) Query: 52 ARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQK 110 A+ E D+ I G L G+P+ +KD TK + T A S L G + +STV K Sbjct: 28 AKQLDRERDQGYIRGP---LHGLPVLLKDMIGTKDKMQTAAGSWALVGAKVPADSTVAAK 84 Query: 111 LWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT--------------- 155 L DNG V+LGK +M E+A +RS++S++ + Sbjct: 85 LRDNGLVILGKTSMSEWAN---------------FRSVNSSNGWNARRGYTFGAYYPDQD 129 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+ A L ++GT+T GSI P+ VGIKPT G SR +I + Sbjct: 130 PNGSSSGSAVATDLGLTIFALGTETSGSILLPSERNNIVGIKPTVGLTSRYMVIPLSERQ 189 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECD----ATCVNLPVPDYERALDQS-IQGMTVGIPK 270 D G + RTV+D+AILL+AI+G D+ D A+ +PDY A S +QG +GIP+ Sbjct: 190 DTIGPLARTVKDAAILLQAISGPDDKDNYTSASPFAAKLPDYLAACKPSGLQGKRIGIPR 249 Query: 271 EYRLDYLSPT---IDKTWQQGISWLKDAGAKIVE 301 ++YL P I +++ ++ + AGA +V+ Sbjct: 250 NV-IEYLGPAGAPIVAAFEKAVTVISAAGATVVD 282 >gi|77918116|ref|YP_355931.1| amidase [Pelobacter carbinolicus DSM 2380] gi|77544199|gb|ABA87761.1| amidase [Pelobacter carbinolicus DSM 2380] Length = 503 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 140/529 (26%), Positives = 226/529 (42%), Gaps = 101/529 (19%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ +IS++E+ + I+ EN N Q+NA I AR A+ S GDA G+P Sbjct: 19 IKKGEISSLEVCEEAIRRAENLNPQLNAIITKTYALARETAKSS-----CGDA-PFCGVP 72 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD A KG+ S +L + P Y++ + ++ G ++LGK N EF + E Sbjct: 73 FLLKDAHHALKGVPMSCGSALLKTYIPQYDAEIVRRFKKAGLIILGKTNTPEFKLAYVTE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +GP +PW +++ GGSSGGS+AAVA + + TD GGSIR PAS+ G Sbjct: 133 PKAFGPTRNPWNP-----EYSCGGSSGGSAAAVAAGIVPFASATDEGGSIRVPASYCGLF 187 Query: 195 GIKPTYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKAIAGYDECDATCVN 247 G+KP+ GR P D+ + ++TR+VRDSA++L A+ G++ + Sbjct: 188 GLKPSRGRN------PVGPDFDEEWSGMSHSHVVTRSVRDSAVMLDAVCGFENGAPYGIF 241 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDAGAK 298 + ER + + P + R+ + + P K +Q + L D G + Sbjct: 242 ----NKERPFIEEVDIA----PGKLRIAFYLRAAYGKNIHPECVKAVEQACTLLTDLGHE 293 Query: 299 IVEISLPHTQYALPAYYII----SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 +VE + Y+I + A L R G R +R E LE+ N G Sbjct: 294 VVEEEPDFREEDAALNYVIVVIGNAAALVDKLVRIHG-RSKVRRE----LEL-SNYTFYG 347 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G+ +K +++A++ T + + DV+LTPT Sbjct: 348 LGRALKAL---------------DFVKAKRRWTQFGVTMDQMLNK-YDVVLTPTLGQPPV 391 Query: 415 PLGKEE---NNSGSMGHIYNDV----------------------------FTVAVNMAGL 443 P+G ++ + SM I + + T N+ G Sbjct: 392 PVGSQQLGRADRFSMKLIASFIGSMMLTSRKLTDAILDKTVDTIMRGQMPVTFIANITGQ 451 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF--RPH 490 PA+SVP + +P G+Q IG+ E L + +EK +F RP Sbjct: 452 PAMSVPLHWSKDGLPCGVQFIGRYGDEAKLLRLAGQLEKAQPWFDKRPQ 500 >gi|62701930|gb|AAX93003.1| Amidase, putative [Oryza sativa Japonica Group] Length = 683 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 131/520 (25%), Positives = 225/520 (43%), Gaps = 76/520 (14%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +I+ V + ++ A++ + M +I Q AE S R G ++G Sbjct: 188 SGEITPVMVARRFLAAVKECSGPDLNMALFISCNPQDVIRQAEASTLRYQQGAPLSAMDG 247 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + + +KD T + L RP + + V +L GAV+ GK NM E G+S Sbjct: 248 VLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGTS 307 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++G +P+ +T K G S G ++ AG LC ++G D GGS+R PA+ G Sbjct: 308 GINPHHGSTRNPY----NTGKVAGGSSGGSAAVVCAG-LCPVALGADGGGSVRMPAALCG 362 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA-----GYDECDATCVN 247 VG+KPT GR S+ G++ ++ GI+ TV D+ I AIA + + +A + Sbjct: 363 VVGLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAAIADQSQPSHLQANARTLY 422 Query: 248 LPVPDYERALDQSIQGMT--VGIPKEYRLDYLS-----PTIDKTWQQGISWLKDAGAKI- 299 + + + + + + V + E L L PTI + W D I Sbjct: 423 FLLHVWMFSETEFAEDLIFFVCLQPELNLPLLKAASSMPTIRLA--RYAKWFNDCSEDIR 480 Query: 300 -------------------VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 ++++P + A+Y+ +E +++ +Y L+ Sbjct: 481 SCCYKAVHTLRTRYGWEVTADVTIPEIEEMRLAHYVTMGSECTASFDKY------LKKLS 534 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTY-VLSSRCY-DSHYLRARKIRTLIKRDFTEAFE 398 K IG+ RI + Y SSR Y +S +R R++ F + Sbjct: 535 KS---------EIGWDV----RIALSAYGSFSSRAYLNSQRIRNRQMY------FHDKIF 575 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEK 455 + DVI+TP T +A L ++G + +I +++A N GLPAI+V + Sbjct: 576 ETFDVIVTPMTGVTAHELQDNAGHTGELDYINGAALVRYSIAGNFLGLPAITVKVGYDRE 635 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAG--YFRPHKWW 493 +P+GLQ IG+P+ E TL + +++ G Y +P ++ Sbjct: 636 GLPVGLQFIGRPWSEATLLHLAYAMQEACGKNYRKPMVYY 675 >gi|21230393|ref|NP_636310.1| amidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769613|ref|YP_244375.1| amidase [Xanthomonas campestris pv. campestris str. 8004] gi|21111950|gb|AAM40234.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574945|gb|AAY50355.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv. campestris str. 8004] Length = 505 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 146/487 (29%), Positives = 222/487 (45%), Gaps = 37/487 (7%) Query: 15 RLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 R+++ S+ +L +Y+Q I + S ++NA IE+ Q AA +R L Sbjct: 12 RMQAGRSSSAQLTYAYLQRIARIDRSGPRLNAVIELNPQAEADAAALDAERRAGQVRGPL 71 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ +KD + A S L FRP ++ + ++L GAV+LGK N+ E+A Sbjct: 72 HGIPLLLKDNIDALPMVNSAGSLALASFRPTQDAFLVRRLRAAGAVILGKTNLSEWANFR 131 Query: 132 SNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ++S R+ + D+ P GSS G+ AA+A L IGT+T GSI A+ Sbjct: 132 STQSSSGWSGRGGLTRNPYALDR-NPCGSSAGTGAAIAASLATVGIGTETDGSITCRAAV 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP- 249 G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA D D P Sbjct: 191 NGLVGLKPTVGLVSRDGIIPISASQDTAGPMTRSVADAAAVLQAIAAPDPQDPATRTAPS 250 Query: 250 -VPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P+Y L ++G +G+ + R D P I + + L+ AGA ++E L Sbjct: 251 STPNYLAHLKPDGLRGARLGLLRNPLRED---PAIAAALDRAVQTLRAAGATVIETRLAT 307 Query: 307 TQYALPAYYIISPAEASSNLARYDGVR-YGLRVEGKDILEMYENTRSIG----FGQEVKH 361 A + E + L Y +R + V+ D L + + FGQE+ Sbjct: 308 DGQWDAAEQTVLLVEFKAGLNAY--LRSHAAPVKDLDALVAFNRANAQREMPYFGQELFE 365 Query: 362 RIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQG--VDVILTPTT-PTSAFPLG 417 + + D YL AR R L +A + +D ++ PTT P LG Sbjct: 366 QAQAAPGL-----EDPAYLSARASARRLAGEQGIDAALKADRLDALIVPTTGPAWVTTLG 420 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 K G + A +AG P++SVP + +PLGL +G + E L +G Sbjct: 421 K--------GDTFPGAGYGAAAVAGYPSLSVPMGQTQ-GLPLGLLFMGAAWSEPRLIELG 471 Query: 478 QIIEKEA 484 E+ + Sbjct: 472 YAYEQRS 478 >gi|221636257|ref|YP_002524133.1| peptide amidase [Thermomicrobium roseum DSM 5159] gi|221157626|gb|ACM06744.1| peptide amidase [Thermomicrobium roseum DSM 5159] Length = 434 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/487 (24%), Positives = 208/487 (42%), Gaps = 69/487 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + + E R+R + +S +L+ + +Q IE + + A++E+ A AE D Sbjct: 1 MNQLLHLPLREIPARIRQRQLSVSDLIQATLQQIERTEPDVQAWVEIDRDGALREAERLD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L G+P+G+KD G+ T+A L ++ + +L + GAV+LG Sbjct: 61 RLAARGTVLPLHGVPVGLKDVIDVAGLPTRAGFAPLADHPAQADAAIVARLRELGAVVLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + + A P +PW + D+ TPGGSS GS+AAVA ++GT T Sbjct: 121 KTHTTQLAFADP------APTRNPW----APDR-TPGGSSSGSAAAVAARQSPLTVGTQT 169 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+ +PA++ G VG KP+ G+I A SLD GI TR+V D+A A+ + Sbjct: 170 AGSVVRPAAYCGVVGFKPSLDWFPLDGVIPLAWSLDHLGIFTRSVEDAAYAYVALCAHQR 229 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYL---SPTIDKTWQQGISWLKDAG 296 + P P+ + L D+L P + Q ++AG Sbjct: 230 LEVPLATEP-------------------PRLFLLVDFLELAEPEVAAHLQDVARRFREAG 270 Query: 297 AKIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 A+I E LP L +++I +E + + +LE + + Sbjct: 271 ARIEERRLPVDVHLLLAVHHVIMLSEMGAL--------------HQQMLERVPD----AY 312 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G ++ + +G V + + + ++F VD ++ PT Sbjct: 313 GPRLRSAVEVGQLVPAGALLHA------RRLRRRLSTLLDSFLSQVDAVILPTAS----- 361 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G + S + + V+T + G PA+S+P+ L +PL QL+ + + L Sbjct: 362 -GPAPDRSTTGDRRFQAVWT----LLGTPALSLPSGLTHDGLPLATQLVARFGHDRHLLH 416 Query: 476 VGQIIEK 482 V E+ Sbjct: 417 VAAWCER 423 >gi|311105601|ref|YP_003978454.1| amidase [Achromobacter xylosoxidans A8] gi|310760290|gb|ADP15739.1| amidase family protein 5 [Achromobacter xylosoxidans A8] Length = 522 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/436 (27%), Positives = 201/436 (46%), Gaps = 60/436 (13%) Query: 41 MNAYIEVVAQKA-RAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 +NA+I + A AA + +++ G A L G+PI +KD G S L Sbjct: 115 LNAFISLSDTPALDGAAAAAARKLREGAAMPLMGVPIAVKDLMQVAGFPQTNGSGGLKPP 174 Query: 100 RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 ++ +L + GA+++G N+ E A G ++E +YG W +T GGS Sbjct: 175 PALRDALAVARLREAGALVVGTTNLHELAYGITSENPHYG-----WVGNPRGAGYTAGGS 229 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS+AAVA + +IGTDT GSIR PA+ G VG KPT+ SR G + SLD G Sbjct: 230 SGGSAAAVAAGIVRLAIGTDTAGSIRIPAACCGVVGFKPTFDAISREGAQALGASLDHLG 289 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 I +V D+A+ ++G E + ++ G+ VG+P+ Y D L+ Sbjct: 290 PIAASVADAALAYSIMSGQAERTVSA-------------GALTGLRVGVPRNYFYDPLAE 336 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + + ++ ++ GA +V + LP +++ + +EA+ + Sbjct: 337 DVAQAVNHALALMQADGATLVPLDLPGVEHSAALQFATLCSEATD-------------IH 383 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 + +++ E G +V+ R+ IG ++ + + Y RA++ R + + F A Q Sbjct: 384 WRRLVDQPET-----LGDDVRVRLEIGQFLPA-----TWYTRAQRGRAALAQMFDLAM-Q 432 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMG----------HIYNDVFTVAVNMAGLPAISVP 449 VDV++TPT L E SG+ H T+ N+ G+PA+++P Sbjct: 433 SVDVLVTPT-------LRIEPPRSGAGAVTIAGREVPLHTAVTGLTMPFNLTGMPALTLP 485 Query: 450 AALCEKKMPLGLQLIG 465 +PLGLQ+ G Sbjct: 486 CGSGRNGLPLGLQIAG 501 >gi|226307738|ref|YP_002767698.1| amidase [Rhodococcus erythropolis PR4] gi|226186855|dbj|BAH34959.1| putative amidase [Rhodococcus erythropolis PR4] Length = 477 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 131/479 (27%), Positives = 212/479 (44%), Gaps = 42/479 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKR 62 L++++ +E + S +S E+ ++ IQ ++ N +NA ++ Q R AAE S ++ Sbjct: 6 LHWLSATEMAASVASNSLSPNEIAEAMIQRVDAVNPSINAIVQFDREQVTRDAAELSRQQ 65 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L G+P IKD A G+ T + + V +L G + LGK Sbjct: 66 ESGEKLGPLHGVPFTIKDLTAVDGLPTTFGMKPMADNIATGNAVVVDRLRGAGGLFLGKT 125 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N E + YGP +PW+ +S SSGG+SAAVA L + G+D G Sbjct: 126 NTPESGYYGGTDNHLYGPTHNPWKLGNSAGG-----SSGGASAAVAAGLGPLAEGSDGAG 180 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R P++ G VG+KPT G + + + G ITRTV D+A++L +AG D D Sbjct: 181 SVRIPSALCGVVGLKPTTGVIPQTILAGRFYNWAYHGPITRTVADNALMLDIMAGPDNAD 240 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + Y A ++G+ V L ++ P + ++ +D GA+I E Sbjct: 241 PLSIERAETSYVEAAKGDVKGLRVAWSTNLGLGHVDPEVLAVCLDALAAFEDLGAQITE- 299 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG----KDILEMYENTRSIGFGQE 358 A P + +P+E+ N G+ V G D+L+ +EN R E Sbjct: 300 -------ATPQWG--NPSESMWN---------GIWVPGFASEYDLLD-WENQRG-----E 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V +I + R RA R ++ +T F DV+++PT ++ FPL + Sbjct: 336 VDDN-LIEIMHEAERLTGVDVGRADAFRGVMWDTWT-TFMNDYDVLVSPTLASATFPLSQ 393 Query: 419 EE----NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + + +FT NM PAI+VPA P+GLQ+ + R++ L Sbjct: 394 FAPSWLEGASLREQLLDWLFTYPYNMLNNPAITVPAGFTADGRPVGLQIAAR-HRQDAL 451 >gi|296533661|ref|ZP_06896218.1| possible amidase [Roseomonas cervicalis ATCC 49957] gi|296266017|gb|EFH12085.1| possible amidase [Roseomonas cervicalis ATCC 49957] Length = 408 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 17/236 (7%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAMGS 131 GIPI +KD F +G+ T+A + +L P + +L G V+LG+ NM EFA Sbjct: 30 GIPISVKDLFDQEGVPTRAGAAVLAEAPPAAGTAPAVARLQRAGFVVLGRTNMVEFAFSG 89 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++G +SP+ D PGGSS G++ AVA + ++G+DTGGS R PA+ Sbjct: 90 LGVNPHFGTPLSPY---DRATGRLPGGSSSGAAVAVADGMGLGALGSDTGGSCRVPAALC 146 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KPT + G++ +PSLD G + TV A+L +AG + PVP Sbjct: 147 GIVGYKPTARQVPLAGVLPLSPSLDSIGPLANTVGCCAVLHALMAGAESAAP-----PVP 201 Query: 252 DYERALDQSIQGMTVGIPK-EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + + G+ +GIP+ + + L P + + + ++ L+DAGA I +LP Sbjct: 202 -------RPVAGLRLGIPEGTFLFEGLEPAVAAAFDRAVARLRDAGAFIERFALPE 250 >gi|308187371|ref|YP_003931502.1| amidase family protein [Pantoea vagans C9-1] gi|308057881|gb|ADO10053.1| amidase family protein [Pantoea vagans C9-1] Length = 478 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/486 (24%), Positives = 198/486 (40%), Gaps = 56/486 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RS ++SA EL + + +E + A+ + A A A E D R G+ L G+ Sbjct: 17 IRSGEVSACELTGAALARMERREPVIQAFCTPTPELALAQAREVDARRTRGETLGALAGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD T + T + S F P + ++L A++LGK EF Sbjct: 77 PLAVKDLICTANVRTTSGSAAYKDFVPEDDDITVERLLAADAILLGKTTAPEFGYSGVGH 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +PW TPGGSS GS AAVA LC ++G+D GGS+R PA+ G Sbjct: 137 NPLFPSPRNPWNL-----GMTPGGSSAGSGAAVAARLCPIALGSDGGGSVRIPAAHCGIF 191 Query: 195 GIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 G K + GR R +S SL+ G +TR+VRD+A+++ +AG D D + Sbjct: 192 GFKASMGRVPLWPGCRDERYPGVSSWESLEHIGPMTRSVRDAALMMSLMAGPDMRDRHSI 251 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 D+ A + + + ++ + P + + + A E+ L Sbjct: 252 PCSDVDWLGAPEHLPGKLRIAFSADFGYVAVDPEVRAVVSAAVQ--RFAAEIDAELDLAD 309 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-----ILEMYENTRSIGFGQEVKH 361 + PA + S+L G+R + +G + + + R+ F + Sbjct: 310 PGFPDPAAAFGALVAMESDLT---GMRQMMAEQGSAMSPHLVAMLQRDWRAENFTDAIAT 366 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-- 419 R + + F Q D+++TPT FPLG + Sbjct: 367 RKAVSNSLWR-------------------------FMQRFDLLITPTLAVPPFPLGMQGP 401 Query: 420 ENNSGSMGHIYND---VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E G M + ND F N G PA SVPA +P+G+Q++G+ + + + Sbjct: 402 EIIDGRM--VRNDHWLSFCYPFNFTGQPAASVPAGFTASGLPVGMQIVGRHLDDALVLAA 459 Query: 477 GQIIEK 482 E+ Sbjct: 460 SAAFER 465 >gi|120404782|ref|YP_954611.1| amidase [Mycobacterium vanbaalenii PYR-1] gi|119957600|gb|ABM14605.1| Amidase [Mycobacterium vanbaalenii PYR-1] Length = 505 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 150/509 (29%), Positives = 221/509 (43%), Gaps = 56/509 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S F + +L S ++V+LV +QAIE S +NA+ V+ ++A A A E+D+ Sbjct: 11 SRRRFPTLGNQLFQLASGTATSVDLVSRSLQAIEASQPTLNAFRVVLTEQALADAAEADR 70 Query: 62 RIING---DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES--TVTQKLWDNGA 116 + G L G+PI +KD G+ T+ + DG P E+ V ++L GA Sbjct: 71 KRAAGADLSRHPLLGVPIAVKDDVDVAGVPTRFGA---DGEVPPAEADAEVVRRLRAAGA 127 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V++GK N E +G +PW + + TPGGSSGGS+AAVA L AA+I Sbjct: 128 VIVGKTNTCELGQWPFTSGPAFGHTRNPW-----SREHTPGGSSGGSAAAVAAGLVAAAI 182 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+D GS+R PA++T VGIKP GR S + + G++ RTV D+A+LL A + Sbjct: 183 GSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLTEAFNGITVHGVLARTVSDAALLLDAAS 242 Query: 237 GYDECDA-TCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 G + T + V DY RA M+ P L P I Q L Sbjct: 243 GNAPGELHTPPPVRVSDYVSRAPGPLRIAMSTKFPFTVFRAGLHPEIRTALQNVADQLTQ 302 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-RSI 353 G IV A P Y++ S N L I E + R + Sbjct: 303 LGHTIVA--------ADPDYHL----RMSWNF---------LSRSTSGIPEWMDRLGRGV 341 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 + + +G ++LS +AR ++ F DV+L PTT A Sbjct: 342 NWDSRTRSNARMG-WLLSQNVLR----KARAGEAASQQRIGWIFNLA-DVVLAPTT---A 392 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAV-------NMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P E +G + D + N+ G P+I+VPA +P+G+QL+G Sbjct: 393 LP-PPEVRAFDDLGGLATDRMMIKACPVTWPWNLLGWPSINVPAGFTSDGLPIGVQLMGP 451 Query: 467 PFREETLFSVGQIIEKEAGY--FRPHKWW 493 E L S+ +E G+ +P WW Sbjct: 452 ANSEPLLVSLAAALEAINGWAVHQPEDWW 480 >gi|13470503|ref|NP_102072.1| amidase [Mesorhizobium loti MAFF303099] gi|14021245|dbj|BAB47858.1| amidase [Mesorhizobium loti MAFF303099] Length = 475 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 124/501 (24%), Positives = 209/501 (41%), Gaps = 50/501 (9%) Query: 1 MSELN--FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE 58 MS+L+ +M E+ ++K +S VEL+ + I+ E + S +N + ++A A Sbjct: 1 MSDLDLCYMPAHEALRLFKAKKLSPVELMQATIRRAEATRSSINCFTFTHFEEAMKLAAR 60 Query: 59 SDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ + G A LEG+PIGIKD KG T S + + ST+ +++ G + Sbjct: 61 AEAKYARGARAGALEGLPIGIKDESYIKGKPTSHGSLLSRDAIGGHTSTMNERIMKAGGI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + + EF+ + +G +PW FTPGGSSGG++A +A + + G Sbjct: 121 VHARTATPEFSCAGYTWSKRWGVTRNPWNP-----DFTPGGSSGGAAATLASGTSSIATG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD---QAGIITRTVRDSAILLKA 234 +D GSIR PAS G VG KP YGR +LD G + R VRD+ +L Sbjct: 176 SDIAGSIRIPASACGLVGYKPPYGRNPDEPPF----NLDFYCHTGPLARNVRDAILLQNV 231 Query: 235 IAGYDECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +AG D + P D + I+G + + + P + K + Sbjct: 232 MAGPSPLDIATLR---PKLRLPFDFKPIKGWRIAFSMDLGSFEVDPDVRKNTLAACDVFR 288 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 GA + E+ L L A ++L++ L KD+ R Sbjct: 289 SLGATVEEVDLGWDDGVLKAGMAYLEHLFGASLSQL------LAEHAKDMTSYAR--RFA 340 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G++ K + T +++R Y + + L+ + DV++ PT A Sbjct: 341 EDGRKSKATDFVATLDVAARMYQT-------LGPLL---------ETYDVLICPTNALPA 384 Query: 414 FP------LGKEENNSGSMGHIYNDVFTVAVNM-AGLPAISVPAALCEKKMPLGLQLIGQ 466 P + E N + V T NM + P +S+P+ +P G+Q++G+ Sbjct: 385 VPAEFDQTTDRVEINGTEVNPSLGWVMTTPFNMLSRCPVLSIPSGHAASGVPTGIQIVGR 444 Query: 467 PFREETLFSVGQIIEKEAGYF 487 + + +F G E G + Sbjct: 445 TYSDADVFRAGLAYETARGQW 465 >gi|302383566|ref|YP_003819389.1| amidase [Brevundimonas subvibrioides ATCC 15264] gi|302194194|gb|ADL01766.1| Amidase [Brevundimonas subvibrioides ATCC 15264] Length = 520 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 149/494 (30%), Positives = 229/494 (46%), Gaps = 42/494 (8%) Query: 19 KDISAVELVDSYIQ-AIENSNSQMNAYIEVVAQKAR-----AAAEESDKRIINGDARD-L 71 K +S V ++ + I + + SQ Y AQ+ R A D N + D + Sbjct: 24 KGVSVVTVLAALISGGVAQAQSQPEGYGLQWAQRDRETINSVVAWVEDAGETNWTSADGI 83 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MG 130 G+PI +KD T+ + T A S L P ++ + +L GAV+LGK N+ E+A + Sbjct: 84 TGLPILLKDNIETRDMPTTAGSLALLDNAPGRDAPLVARLRAAGAVILGKTNLSEWANIR 143 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 SS S + V R+ D+ T GSS GS AAVA L A+IGT+T GSI PA+ Sbjct: 144 SSASVSGWSGVGGQTRNPHVLDRNT-CGSSSGSGAAVAAGLAPAAIGTETDGSIVCPAAI 202 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KPT G SR I+ + S D AG +TR+V D+AI+L IAG D D Sbjct: 203 NGIVGFKPTVGMVSRTHIVPISHSQDTAGPMTRSVEDAAIVLSVIAGTDPADPATAEADA 262 Query: 251 P--DYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 D+ ALD S++G +G+ + L S D+ +++ + L+DAGA +VEI+ Sbjct: 263 RKVDFRAALDAGSLRGTRIGVAR--FLTGYSAGTDRVFEENLQALRDAGAVLVEITEGPD 320 Query: 308 QYALPA------YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEVK 360 A+ A +Y + A+ ++ LA D + R I R +G FGQE Sbjct: 321 MEAIGAAETTVLHYELK-ADLNAYLASTDAGQVKTRTLADVIAFNAATPREMGLFGQE-- 377 Query: 361 HRIMIGTYVL---SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS--AFP 415 T+VL ++ Y+ AR+ + A +G+D +L + A Sbjct: 378 ------TFVLAEATTGLETPEYIAARETSLRL------AGVEGIDRMLAENNVVALVAPT 425 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 +G + G Y + +AG P ++VP + +P+G+ IG + + + S Sbjct: 426 VGPAWSIDAVNGDHYLGAASTLPAVAGYPHLTVPMGFVQ-GLPVGISFIGTKWDDARILS 484 Query: 476 VGQIIEKEAGYFRP 489 +G E+ RP Sbjct: 485 LGYAYEQATRAIRP 498 >gi|163745442|ref|ZP_02152802.1| amidase, putative [Oceanibulbus indolifex HEL-45] gi|161382260|gb|EDQ06669.1| amidase, putative [Oceanibulbus indolifex HEL-45] Length = 444 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 207/478 (43%), Gaps = 57/478 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E M ++ + + DI V L D+Y+ AI+ + Y V +ARA A + Sbjct: 1 MREWLEMTAADLGRGIATGDIDPVALCDTYLDAIDAHPMRDRIYARVTPDRARAEAAAAA 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G L+G+PI KD F T G T+A + +L+G P ++ V G V L Sbjct: 61 ERAREGQRLSPLDGVPISWKDLFDTAGTATEAGTKLLEGRVPENDAEVLANATAMGLVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M E A + P + ++ D + G SSG +++ G L AA+IG+D Sbjct: 121 GKTHMSELAFSGLG----HNPSTATPPCVNEPDSVSGGSSSGAAASVAFG-LAAAAIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA++ VG+K T GR S G + A D G + R+V D+A+LL + G Sbjct: 176 TGGSVRIPAAWNDLVGLKTTAGRVSLAGTVPLAAKFDTVGPLCRSVEDAALLLGVLEGAK 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 PD + ++G + ++ LS ++ I LK+AGA + Sbjct: 236 S----------PDLH---ESDLEGCRFAVLTNVVMEDLSDEPKAAFEAAIERLKEAGATV 282 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EI++P + A+P + EA YGL +D++E E+ Sbjct: 283 DEIAVPEVEDAMPLSSCLYTTEA-----------YGLW---RDVIEANPE----AMFSEI 324 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R +G Y+ A L + + A G D +L PT P P E Sbjct: 325 LERFQLGKGF-----SGPDYVAAWAKLDLARAGYDRAV-AGYDAVLVPTAPM--LPPNIE 376 Query: 420 ENNSGSMGHIYNDVFTV----AVNMAGLPAISVP--AALCEKKMPLGLQLIGQPFREE 471 NS ++ ++ ++ N+ GL A+++P A C G+ + P EE Sbjct: 377 RLNSDHDYYLAQNLLSLRNTRVANLMGLCALTLPTGAPSC------GISFMAAPNAEE 428 >gi|163853123|ref|YP_001641166.1| amidase [Methylobacterium extorquens PA1] gi|163664728|gb|ABY32095.1| allophanate hydrolase [Methylobacterium extorquens PA1] Length = 611 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 120/428 (28%), Positives = 186/428 (43%), Gaps = 54/428 (12%) Query: 69 RDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+P +KD G+ T AC + P + ++L GA+++GK N+D+F Sbjct: 66 KPLWGVPFAVKDNVDVAGLPTTAACPDF--AYTPQATAPAVERLLAAGAILVGKTNLDQF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + Y PV P ++D PGGSS GS+ AVA L ++GTDT GS R P Sbjct: 124 ATGLVGVRTPY-PV--PKNAIDPA--IVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KP+ G S G++ +LD + TV ++ + + +AGYD D Sbjct: 179 AGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADAVFRIMAGYDPQDPYSRA 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPVP AL G+ VG+P L + + + G Sbjct: 239 LPVPPRPGALP---PGLRVGVPDAAGLIFAGDALSASAFDG------------------- 276 Query: 308 QYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 AL + ++ A A++ +LA + V GL G + E Y+ R GF +E + Sbjct: 277 --ALADLHTVTGAAATAVDLAPFFAV-AGLLYAGPWVAERYQAIR--GFMEERPEALHPT 331 Query: 367 TYVLSSRC--YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLG 417 T + S + + A R R TE +G+DV++ PT P +A P+G Sbjct: 332 TRAIISAATGHSAADAFAGLYRLAELRRATEPVWRGIDVLVVPTYPRPRRVADLAADPVG 391 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +G +T VN+ L A++VP +P G+ LI + + +G Sbjct: 392 PNSE----LG-----TYTNFVNLLDLCALAVPGRFRADGLPSGVTLIAPRGADGLIAELG 442 Query: 478 QIIEKEAG 485 + AG Sbjct: 443 ARLHAAAG 450 >gi|18312690|ref|NP_559357.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum aerophilum str. IM2] gi|18160166|gb|AAL63539.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum aerophilum str. IM2] Length = 399 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 118/416 (28%), Positives = 194/416 (46%), Gaps = 62/416 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+ + +KD G+ + + + V ++L GAV++GK NM E A+G Sbjct: 42 LCGLAVAVKDNIEVAGMPITNGAPYMKKMA-DKTAPVVRRLIAEGAVVIGKTNMHELALG 100 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++N ++GP +P + T G S G + A G + IGTDTGGS+R PA+ Sbjct: 101 ATNVNPHFGPTRNP----HDPSRITGGSSGGSAGAVAIG-VADLGIGTDTGGSVRIPAAL 155 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KP YG+ G++ A SLD G ITRTV D +L A AG+ + LP Sbjct: 156 CGVVGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVADLIRILSA-AGWGPSE-----LPR 209 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 P+ R + +GI + + ++K + + + L+ G E+ + +YA Sbjct: 210 PNRFR------FAVLMGISENTK------HVEKAFWKAVGILESIGGMRDEVFIETGRYA 257 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A I +EA++N YD +R G D+ + ++ Sbjct: 258 -AARAAILLSEAAANY--YDYLRGAAEHMGNDVATLLSTGAALP---------------- 298 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH-- 428 Y+ A++++ + F F++ DV++TPTT T A P+ EE +S ++ Sbjct: 299 -----AVAYITAKRVKEEATKFFDTLFKK-YDVVVTPTTATEAVPI--EEADSIAVRPKL 350 Query: 429 -IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 Y ++F N+ G PAISVPA +P+GLQ+ + E+ L ++ + E+E Sbjct: 351 LAYTELF----NLTGHPAISVPAP--TSGLPVGLQIAAR--DEDVLLAIAKAYEEE 398 >gi|296161889|ref|ZP_06844690.1| Amidase [Burkholderia sp. Ch1-1] gi|295887908|gb|EFG67725.1| Amidase [Burkholderia sp. Ch1-1] Length = 471 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 129/505 (25%), Positives = 215/505 (42%), Gaps = 69/505 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ + ++ R + +S V ++ + + + + +NA+ + + A +AA E++ Sbjct: 1 MSEIVMLNAAQLLAGFRQRSLSPVAVMCAVLDRVTKLDPVVNAFCALDEEGAMSAAGEAE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R + G+ L+G+P+ +KD A G T+ S R ++ +L GA+ Sbjct: 61 RRWMRGEPCGPLDGVPVSVKDLVAVAGFPTRHGSWTASPDRESVDAPAVARLRRAGAIPF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF + G +PW + + + GGSSGGS+ AVA + S+ TD Sbjct: 121 GKTTTSEFGNKIVTDCPLTGATRNPWDT-----RLSSGGSSGGSAVAVALGMGPLSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PA ++G VG KPT+ S+ +L G I RTVRD+A++L A+ Sbjct: 176 GGGSIRIPACWSGVVGFKPTFALVPAGSAASWT-ALSTLGPIARTVRDAALMLDAM---- 230 Query: 240 ECDATCVNLPVPD-------YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 TC N P Y LD + G+ + ++P I + ++ + Sbjct: 231 ----TCANDDRPPGTRSPAGYSTGLDDGVAGLRIAWCPAPDNVSVAPDIAECVERAVDAF 286 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 GA ++ + + +A Y YG G+ M+ S Sbjct: 287 GALGATVIRTDV-------------------APIADY----YG---NGR----MHSVQWS 316 Query: 353 IGFGQEVKH-----RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF----TEAFEQGVDV 403 + F Q V+H R ++ + + + A + L+ R E F + D+ Sbjct: 317 VFFAQRVRHMEAADRTLLDPDLTALSDAGARIDTATFVDALLARHALGASMETFFERYDL 376 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 +LTPT P+ G H+ N + T N AG+PAISVP +P GLQ Sbjct: 377 LLTPTFHCGPPPV------PGLPSHLRNAPLLTAWCNQAGVPAISVPCGF-AGDLPTGLQ 429 Query: 463 LIGQPFREETLFSVGQIIEKEAGYF 487 +IG+ + + + E G F Sbjct: 430 IIGRRGSDALVLRAARAYELARGDF 454 >gi|110677454|ref|YP_680461.1| amidase, putative [Roseobacter denitrificans OCh 114] gi|109453570|gb|ABG29775.1| amidase, putative [Roseobacter denitrificans OCh 114] Length = 442 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 129/475 (27%), Positives = 206/475 (43%), Gaps = 67/475 (14%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +I V+L +Y+ AI + Y V ++A A + R +G R L+G+PI Sbjct: 20 EIDPVDLTQTYLDAISVYPLRDRIYARVTPERALHEAAAARGRARSGQRRSPLDGVPISW 79 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SNETS 136 KD F + G+ T+A S +L P ++ V Q G V LGK +M E A N ++ Sbjct: 80 KDLFDSAGVATEAGSLLLKNRVPERDAKVLQNATAAGLVCLGKTHMSELAFSGLGYNPST 139 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 P I+ D PGGSS G++A+VA L A +G+DTGGS+R PA++ VG+ Sbjct: 140 ATPPCIN-------DDGAVPGGSSSGAAASVAFDLAAVGVGSDTGGSVRIPAAWNDLVGL 192 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G++ A D G + R+V D+A++L + G D + Sbjct: 193 KTTSGRLSNDGVVPLAARFDTVGPLCRSVEDAALMLAVLQGGRAADLS------------ 240 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 S+ G + + ++ L + + +S L+ AGA++ EI + A+ Sbjct: 241 -GASLTGRRLAVLNTVAMEDLRSGPAEAFSAAVSKLELAGAQVEEIHIDAVNDAMALTTC 299 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILE-----MYENTRSIGFGQEVKHRIMIGTYVLS 371 + AEA YGL +D++E MYE E+ R +G Sbjct: 300 LYTAEA-----------YGL---WRDVIEANPDAMYE---------EILKRFRLG----- 331 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 Y+ A + + +A G D ++ PT P P N+ ++ Sbjct: 332 QNHSGPDYVAAWAALEAARVSYHQA-TAGFDAVILPTAPI--LPPNLNRLNTDHDYYVTE 388 Query: 432 DVFTVAV----NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ ++ N+ GL A+S+P GL L+ P REE L +G E+ Sbjct: 389 NLMSLRNTRIGNLMGLCALSLPT----DTPSCGLMLMAPPHREEALLRLGTAAEQ 439 >gi|76800783|ref|YP_325791.1| amidase [Natronomonas pharaonis DSM 2160] gi|76556648|emb|CAI48219.1| probable amidase [Natronomonas pharaonis DSM 2160] Length = 477 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 123/470 (26%), Positives = 206/470 (43%), Gaps = 46/470 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R ++SA +L + + I ++ + +NAY+ V+ AR E I +G+A L G+ Sbjct: 16 VREGELSAADLASASLDRI-DATTDLNAYVTVLDSAAR----ERAAAIDDGEASGPLAGV 70 Query: 75 PIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ IKD + K G+ L ++ VT++L GA ++G N Sbjct: 71 PVAIKDLRSRKAGVRNTMGLAALSDNIAESDAIVTERLEAAGANIVGTTNTPALGHTIKT 130 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + G +P+ S + G ++ ++ V + G+D GGS+R PAS Sbjct: 131 DNRLVGATPTPFDENRSAGGSSGGSAAALAAGTV-----RLATGSDIGGSLRVPASCCNV 185 Query: 194 VGIKPTYGRC-SRLGIISFAPS--LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G+KPT G R G +F+P+ G + RT ++A+ L +AG+D D V L Sbjct: 186 IGLKPTLGVVPERGGTDAFSPNSPFFVGGPMARTAEETALGLSVLAGHDSRDPYSVPLGE 245 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI--VEISLPHTQ 308 +Y A ++ + ++V + L ++P + +T + +S L+ AGA + +SLP + Sbjct: 246 TEYLAATERPTESLSVAYSPDLDLQPVAPAVRETVGKAVSDLEAAGAAVETTAVSLPPYE 305 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 L Y+ + A+ YG+ E DI E T S+ G E Sbjct: 306 E-LSMAYVTQVGAFFAAFAQQVEAEYGVDFETADIEPTVEATISLADGLEASDE------ 358 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--------EE 420 R + + D EA G DV++TPT + P GK E Sbjct: 359 ------------RKQNVPRTAAYDGIEAALAGHDVLITPT--LTVPPYGKRLADGYPTEI 404 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + G + + T N+ G PA SVPA + +P+GLQ++G+ F E Sbjct: 405 DGETVRGVPTDAMLTWVFNLTGHPAASVPAGFTDDGLPVGLQVVGRRFGE 454 >gi|240273757|gb|EER37276.1| amidase [Ajellomyces capsulatus H143] Length = 623 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 143/514 (27%), Positives = 223/514 (43%), Gaps = 83/514 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L + S+V+LV++YI+ I N ++ E+ A A D +G R L G+ Sbjct: 124 LSRRCFSSVDLVNAYIKRIAEVNDTLHVVAEL-NPDAVNIARHLDVERRHGKIRGPLHGL 182 Query: 75 PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----M 129 PI IK +HT + S+ L G +STV KL + G ++LG + E+A Sbjct: 183 PIVIKGNIGIADRMHTTSGSYALLGAELSEDSTVVAKLKEAGVIILGMAGLSEWAGFRAS 242 Query: 130 GSSNETSYYG-PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 SSN S YG VI + + P GSS GS A L A++GT+T GSI P+ Sbjct: 243 NSSNGWSAYGGQVIGAYYP-----RQDPAGSSSGSGVASDLGLAFAALGTETSGSIISPS 297 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 VGIKPT G SR +I + LD G + RTV+D+A LL+ IAG D D Sbjct: 298 QQNNIVGIKPTVGLTSRHLVIPISQHLDTVGAMARTVKDAAKLLQIIAGPDSSDNYTSVF 357 Query: 249 P---VPDYERALDQS-IQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEI 302 P VPDY A S ++G +GIP L++LS P + + ++ L D+GA IV Sbjct: 358 PFDCVPDYPAACQHSALKGKRIGIPTNV-LEFLSTDPAVVAPFNTAVTLLADSGAIIVR- 415 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVK 360 Y+ ++ SP + Y + G E+ N +I +++ Sbjct: 416 ---DANYSAYEEFMTSPLPVQ--------ILYADLINGIANYCSELKTNPNNIHNLSDLR 464 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP----- 415 H+++ + RD T ++++ + + + T+P +P Sbjct: 465 -----------------HFVQTFPLEDYPDRD-TRSWDEALRIGVNNTSP-EFWPIYQKL 505 Query: 416 ---------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA--------------- 451 LG N+ + ++V +A MAG P ++VP + Sbjct: 506 LQMVGEGGVLGALRRNNLDAIVLPSNVSPLASGMAGTPMVTVPMSVWPVDTKVVTSPRDL 565 Query: 452 -LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 L MP+GL +G + EETL + E+++ Sbjct: 566 VLSAPGMPMGLSFMGDLWSEETLIGMAYAYEQKS 599 >gi|304394736|ref|ZP_07376639.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130] gi|303293155|gb|EFL87552.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130] Length = 410 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 125/417 (29%), Positives = 188/417 (45%), Gaps = 48/417 (11%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ +G+K A G IH+ +H ++ S +T +L + GA ++ LNMDE A+ Sbjct: 31 LSGLTVGMKANIAVAGHIHSAGMAHRSSIIAKNHAS-ITMRLLEQGADLVPHLNMDEAAL 89 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + ++G +P + GGSSGGS+AAVA A++GTDT GSIR PAS Sbjct: 90 GGLTDNVHFGRTDNP-----RLPGYNAGGSSGGSAAAVAAGCVDAALGTDTLGSIRIPAS 144 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 + G G+KPT+G R GI+ A LD G + RT LL +AG+D D +LP Sbjct: 145 WCGVAGLKPTHGLVGRTGIVPLALGLDVVGPMARTAEQLLPLLDCLAGFDRDDPD--SLP 202 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +PD + + M +G+P E P L G +V IS+P + Sbjct: 203 LPDDWHTKEAKLS-MRIGVPVEIGGVDCEPETLTALTMVRKALMFCGHDVVAISVP--GW 259 Query: 310 ALP----AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + P A +++ AE + LA + R F +V+ +M Sbjct: 260 SPPDLRRAAFLVLEAEGAVALAE-------------------DLARGDTFSPDVRKLLMY 300 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G V + + + + AR R R F + VD +L PTTP A + + Sbjct: 301 GHDVPAVKLTTAMMVLARA-RAGFARTFLD-----VDCLLMPTTPQRA-------TLADT 347 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FT N+AGLPAI+VP L P +QL+G + + L + +E+ Sbjct: 348 AAPANQADFTAPANIAGLPAIAVPVELPNADRPASVQLMGPAWSDRWLIACAVKLEQ 404 >gi|27383007|ref|NP_774536.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27356180|dbj|BAC53161.1| blr7896 [Bradyrhizobium japonicum USDA 110] Length = 490 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 148/522 (28%), Positives = 226/522 (43%), Gaps = 75/522 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SE +F + E L +K +SAVEL I IE + ++NA +A AA E+D Sbjct: 4 SEWSFKSAVELSAALSAKKVSAVELTRDAIGRIERHDGKINAICVRDFDRALGAAREADA 63 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ G+ + L G+P+ IK+ F G+ T F+P ++ ++ G V+LGK Sbjct: 64 ALVRGERKPLLGLPLTIKESFNIAGLPTTWGFVPQKDFKPVEDALPVARIKQAGGVILGK 123 Query: 122 LNMDEFAMGSSNETSY---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 N+ +G S+ SY YG +P+ TPGGSSGGSSAA+A CA + G+ Sbjct: 124 TNV---PVGLSDWQSYNDIYGTTNNPYDL-----GRTPGGSSGGSSAALAAGYCALATGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLG-------IISFAPSLDQAGIITRTVRDSAIL 231 D GGS+R PA G KPT C+ G I L G + RT D ++L Sbjct: 176 DIGGSLRVPAFHCGIFAHKPTINLCAARGETPPPFPAIPREGDLAVIGPMARTAADLSLL 235 Query: 232 LKAIAGYDECDATC---VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 L +AG D DA ++LPV A QS++ V + + + L + + Sbjct: 236 LDVMAGPDPLDAGVAYKLDLPV-----ARHQSLRDFRVLVIESHPLLPTDRDVRDAIDKL 290 Query: 289 ISWLKDAGAKIVEISLPHTQYA-------------LPAYYIISPAEASSNLARYDGVRYG 335 + L AG + S +A L A+++ P E + + AR Sbjct: 291 ATDLAKAGVTVARESPLLPDFADTSRLYMRMLLGFLGAFFL--PDELADSQARAS----- 343 Query: 336 LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 ++ +D E R G HR +VL + LRA + R L K Sbjct: 344 -QLSPEDRSLEAERLR----GTIASHR----AWVLDAGSRAG--LRA-QWRALFK----- 386 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNS------GSMGHIYND--VFTVAVNMAGLPAIS 447 D ++ P PT AFP S + Y+D + + GLPA + Sbjct: 387 ----SFDAVICPIMPTPAFPHDHSPEQSLRRISIDGKDYPYSDQLAWPGVATLPGLPATA 442 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VP L + +P+G+Q++G + T + ++IE+E G F P Sbjct: 443 VPLGLSKDGLPVGVQIVGPFLEDRTPLRLAELIEREFGGFTP 484 >gi|188580570|ref|YP_001924015.1| amidase [Methylobacterium populi BJ001] gi|179344068|gb|ACB79480.1| Amidase [Methylobacterium populi BJ001] Length = 566 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 135/518 (26%), Positives = 215/518 (41%), Gaps = 58/518 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M V + + ++A L +++ IE N + A I + Q A +R Sbjct: 65 MTVEDCQRAFAEGSVTAEALAQAFLARIETYNPRYKALIVMNPQALDDARAIDARRAAGE 124 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNGAVMLG 120 L G+P+ IKD G+ + H L P ++ VT ++ + G V+LG Sbjct: 125 TLGPLAGVPVVIKDTMDMAGLPSTGGWHFLSAEAGGVDLIPATDAPVTARMREAGCVILG 184 Query: 121 KLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K N+ + GS S+ GP ++P + D+ PGGSS G++ AVA L + + Sbjct: 185 KTNVPVLSHTGSHANDSWAGPTLNPA----APDRI-PGGSSAGTATAVAASLAVLGLAEE 239 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL-DQAGIITRTVRDSAILLKAIAGY 238 TGGSI+ PAS G VGIKP++G G++ A S D G I R VRD+A+ L A+AGY Sbjct: 240 TGGSIQNPASAQGLVGIKPSFGLVPNAGVMPLAGSTRDVVGPIARCVRDAALTLDALAGY 299 Query: 239 DECDATCV----NLPVPDYERALDQ-SIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWL 292 D V P Y L+ ++ G +G+ +R LS + + + L Sbjct: 300 TAADPKTVAGIGKRPAGGYTAGLEPGALAGKRLGLYGPGWRDLPLSEEASALYARAQAEL 359 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG--------------VRYGLRV 338 + AGA +V T +A + AE + L +D R G V Sbjct: 360 EAAGATLVADPFAGTDFA-------AIAEPTPGLVYFDARGFESAPYDLQLYLERMGPDV 412 Query: 339 EGKDILEMYENTRS-IGFGQEVKHRIMIGTYVLSSRCYD-------SHYLRARKIRTLIK 390 + E T++ F + L++ D S +L AR+ L Sbjct: 413 AIRSFAAFAEATKAEDAFAPGGVLHPITNLRQLAACLADPASPPDVSDFLAAREAY-LAV 471 Query: 391 RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA 450 D A E G+D ++ P PL + G++ + +N+AGLP +++PA Sbjct: 472 FDRVMA-EHGLDALVFPQMRAELPPL----HGPGTL----LETTVCEINIAGLPGVTLPA 522 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 P L +G+ + E L + E+ + R Sbjct: 523 GAYASGSPFNLIFVGRMWSEGDLLACAYAYEQATHHRR 560 >gi|329929251|ref|ZP_08283009.1| peptide amidase [Paenibacillus sp. HGF5] gi|328936737|gb|EGG33178.1| peptide amidase [Paenibacillus sp. HGF5] Length = 497 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 155/520 (29%), Positives = 226/520 (43%), Gaps = 103/520 (19%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S+VELV Y++ I + + + +EV + A E +R G L GIPI +KD Sbjct: 26 VSSVELVQLYLERIGLYDGWLRSILEVNPDALQMAQELDQERRNLGARGRLHGIPILLKD 85 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--MGSSNETSY 137 T +HT A S L +S V KL + GAV+LGK NM E+A M S+ Y Sbjct: 86 NIDTGDRLHTSAGSITLADSYAAKDSFVAAKLREAGAVILGKSNMTEWANFMSSTMWAGY 145 Query: 138 YGPVISPWRSMDSTDKFTPG-----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 S R + + + + PG GSS GS AAVA L AA+IGT+T GSI P+S Sbjct: 146 -----SSRRGL-TLNPYGPGEMFIGGSSSGSGAAVAANLAAAAIGTETSGSIISPSSQNS 199 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVNLP 249 VG+KPT G SR GII + D AG +TR+V D+AILL AIAG D+ D T Sbjct: 200 LVGLKPTIGLVSRTGIIPITHTQDTAGPMTRSVEDAAILLGAIAGADDLDEVTKTAAEAR 259 Query: 250 VPDYERALDQS-IQGMTVGIPKEY-------RLDYLSPTIDKTWQQGIS----------- 290 V DY + LD ++ +GIP+ Y RLD + ID +QG + Sbjct: 260 VEDYTKFLDAGYLKRARIGIPRYYYKHLDRDRLDIVESAIDVLREQGATIIDPVELPCQG 319 Query: 291 --W----LKDAGAKIVEISLPHTQYALPAYY---IISPAEASSNLARYDGVRYGLRVEGK 341 W L+ K V L + +LP + +I+ EA +++A ++Y G+ Sbjct: 320 TRWDANVLRYEFKKCVNDYLANVDPSLPVHSLAEVIAYNEAHADIA----LKY-----GQ 370 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 D L E T S + YL ++ +++ A G+ Sbjct: 371 DTLIWAEET--------------------SGSLTEKEYLESK------RKNKERAGAMGI 404 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------ 455 D +L E+ ++ + N+ AG P+++VP E Sbjct: 405 DHVL-------------REHQLDALLFLGNEYGPDLAARAGYPSVTVPGGYAENGIIAPG 451 Query: 456 ----KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 K P G+ IG + E L + E+ + P K Sbjct: 452 GYNTKGPQGVTFIGTAYSEPVLIQLAYGFEQATKHRVPPK 491 >gi|46116360|ref|XP_384198.1| hypothetical protein FG04022.1 [Gibberella zeae PH-1] Length = 585 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 151/312 (48%), Gaps = 21/312 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYI----QAIENSNSQMNAYIEVVAQKARAAAEE 58 +L ++ ++ +++ +++V+LV Y+ Q E +NS M + A A A E Sbjct: 58 KLEEATFTQMQNAMKAGKLTSVQLVTCYLIRTYQTEEYTNSIMQ-----INPDAFAIAAE 112 Query: 59 SDKRIINGDARD-LEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 D G R L GIP +KD TK + T A S L G ++ V +KL D GA Sbjct: 113 RDAERAKGKVRGPLHGIPFTVKDNIGTKDSLETTAGSWALLGNVVPRDAHVVKKLRDAGA 172 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFT--PGGSSGGSSAAVAGFLCAA 174 V+ GK + E+A SN+ Y + + S FT PGGSS GS+ V A Sbjct: 173 VLFGKAALSEWADMRSND--YSEGYSARGGQVRSAYNFTINPGGSSTGSAVGVGANAIAF 230 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+GT+T GS+ PA+ VGIKPT G SR G+I + D G RTVRD+ ++L A Sbjct: 231 SLGTETDGSVINPANRNALVGIKPTVGLTSRAGVIPESEHQDSVGTFARTVRDATLVLDA 290 Query: 235 IAGYDECD----ATCVNLPVPDYERALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 I G DE D A P Y + L ++++G T G+P + + + + Sbjct: 291 IYGLDERDNYTSAQKDKTPKGGYAQYLSKKKALKGATFGLPWKSFWVHADEDMQSQLLEL 350 Query: 289 ISWLKDAGAKIV 300 + +K AGA I+ Sbjct: 351 VDLIKSAGATII 362 >gi|146339595|ref|YP_001204643.1| amidase [Bradyrhizobium sp. ORS278] gi|146192401|emb|CAL76406.1| Putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS278] Length = 450 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 20/282 (7%) Query: 28 DSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIKDCFATKG 86 D ++ + + A+I V A +AA+ D R N GIP+ IKD F KG Sbjct: 28 DCLVRIADPAGEGQRAFIHVDKDAALSAADGMDALRKANAAPSAFAGIPVSIKDLFDIKG 87 Query: 87 IHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW 145 T+A S L+ P ++ +L G V++G+ NM EFA +YG S W Sbjct: 88 QVTRAGSRALEDSAPAEADAPAVARLRKAGFVVIGRTNMTEFAYSGIGINPHYGTPKSAW 147 Query: 146 RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 + + PGGSS G++ +VA + ++GTDTGGS R PA+F G G KPT R Sbjct: 148 KREVG---YVPGGSSSGAAVSVADRMAYGALGTDTGGSCRIPAAFNGITGYKPTQARVPL 204 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL-DQSIQGM 264 G + + +LD G + TV A+L D+ + P+ R L + ++G+ Sbjct: 205 DGGVPLSSTLDSFGPLANTVACCAVL----------DSVLADEPI----RPLASRPVKGL 250 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + +P LD L + +T+++ + L GA I I P Sbjct: 251 RLAVPTTIVLDELDAEVAETFERALDTLARQGALIERIEFPE 292 >gi|227509497|ref|ZP_03939546.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191040|gb|EEI71107.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 488 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 124/516 (24%), Positives = 219/516 (42%), Gaps = 75/516 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + ++ + + + IS +L+ + IE N ++NA + ++AR D Sbjct: 10 SATQLTNLIHNHQISRADLLQQLLDTIEEQNPRLNAVTHLWPERARQMVTH-----FKDD 64 Query: 68 ARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + GIPI +K + KG S +L + + + L G + +G+ N E Sbjct: 65 GQPFAGIPILLKGLGQSFKGEIDSGSSQLLRDYIAPETNNFVKGLLSAGLIPVGETNAPE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F + ++ YG +PW + + PGGSSGGS+AAV + G D GGSIR Sbjct: 125 FGFKNITDSKLYGNAHNPWNT-----DYQPGGSSGGSAAAVGDGWLPIAAGNDGGGSIRI 179 Query: 187 PASFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 P+SF+GT+G+KPT GR + I+FA IT+ ++D+A LL A++ Sbjct: 180 PSSFSGTIGLKPTRGRVPTGPDEWRGWQGASINFA--------ITKDIQDTAKLLDALSV 231 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAG 296 V LP D+E L+ + + + + ++ +S + + +L+ AG Sbjct: 232 VQMSAPFQVPLPEHDFESTLNDLPKNLKIAFSTKSPVNTPISNEAKRAVSNAVDFLEKAG 291 Query: 297 AKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 I+E P L YY ++ E ++ A D D +++N + + Sbjct: 292 YDIIEADAPIDGIQLMQTYYTMNAGETATMFANMD----------LDSQTIHDNVEPLTW 341 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + + +S+ Y ++ + + F D+ LTPTT A Sbjct: 342 A------LNVAGESVSAVAYSQALAFWDQVAATM-----DTFSDQYDLYLTPTTAFQAPQ 390 Query: 416 LGKEENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAISVPAAL 452 + ++ + +M + N FT N++G PAIS+P + Sbjct: 391 VDQQLVSDQNMEKLINIREFEPNERLQIIWDQWLPALTISPFTQLANISGQPAISLPTYV 450 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +PLG+Q + + RE+ L +G++ EK AG F+ Sbjct: 451 GNNGLPLGIQFMAKKGREDLLLQIGRLFEK-AGTFK 485 >gi|261407697|ref|YP_003243938.1| Amidase [Paenibacillus sp. Y412MC10] gi|261284160|gb|ACX66131.1| Amidase [Paenibacillus sp. Y412MC10] Length = 497 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 152/512 (29%), Positives = 223/512 (43%), Gaps = 91/512 (17%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S+VELV Y++ I + + + +EV + A E +R G L GIPI +KD Sbjct: 26 MSSVELVQLYLERIGLYDGWLRSILEVNPDALQIAQELDQERRNLGARGRLHGIPILLKD 85 Query: 81 CFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--MGSSNETSY 137 T +HT A S L +S V KL + GAV+LGK NM E+A M S+ Y Sbjct: 86 NIDTGDRLHTSAGSITLADSYAAKDSFVAAKLREAGAVILGKSNMTEWANFMSSTMWAGY 145 Query: 138 YGPVISPWRSMDSTDKFTPG-----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 S R + + + + PG GSS GS AAVA L AA+IGT+T GSI P+S Sbjct: 146 -----SSRRGL-TLNPYGPGEMFVGGSSSGSGAAVAANLAAAAIGTETSGSIISPSSQNS 199 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVNLP 249 VG+KPT G SR GII + D AG +TRTV D+AILL IAG D+ D T Sbjct: 200 LVGLKPTIGLVSRTGIIPITHTQDTAGPMTRTVEDAAILLGVIAGADDLDEVTKTSAQAR 259 Query: 250 VPDYERALDQS-IQGMTVGIPKEY-------RLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V DY + LD S ++ +GIP+ Y RLD + ID L++ GA I++ Sbjct: 260 VEDYTKFLDASYLKRARIGIPRYYYKHLDQDRLDIVESAIDV--------LREQGATIID 311 Query: 302 -ISLPHTQYALPAYYIISPAEASSNLARYDGVRY----------GLRVEGKDILEMYENT 350 + LP +N+ RY+ +Y L V + Y Sbjct: 312 PVELP-----------CQGTRWDANVLRYEFKKYVNDYLANVAPSLPVHSLAEVIAYNEA 360 Query: 351 R---SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 ++ +GQ+ +I S + YL ++ +++ A G+D +L Sbjct: 361 HADIALKYGQDT----LIWAEETSGALTEKEYLESK------RKNKERAGAMGIDHVL-- 408 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK----------KM 457 E+ ++ + N+ AG P+++VP E K Sbjct: 409 -----------REHQLDALLFLGNEYGPDLAARAGYPSVTVPGGYAENGIIAPGGYNTKG 457 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 P G+ IG + E L + E+ + P Sbjct: 458 PQGITFIGTAYSEPVLIQLAYGFEQATKHRVP 489 >gi|121700657|ref|XP_001268593.1| amidase [Aspergillus clavatus NRRL 1] gi|119396736|gb|EAW07167.1| amidase [Aspergillus clavatus NRRL 1] Length = 502 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 127/498 (25%), Positives = 221/498 (44%), Gaps = 42/498 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV------VAQKARAAAEESD 60 + + E + LR K + E+V++Y+ I N + A I V VA + E Sbjct: 12 LTIIEFHNALREKRTTCAEVVEAYLARISQYNDTLKALITVNKNALDVALQRDQETETLL 71 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R + L G+PI +KD ++T + T + L + + ++ V +L GA++LG Sbjct: 72 QRSEDNVFPPLHGVPIILKDTYSTVDMPTTSGIKALHSLQTNDDAFVVGELRRAGAIILG 131 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF++ +S G +P+ D T TPGGSSGG++AA+A L G DT Sbjct: 132 KANLHEFSLEGITVSSLGGQTRNPY---DLTR--TPGGSSGGTAAALAANLGLVGCGGDT 186 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 S+R PAS VG +PT G+ SR GI+ + D G + RTVRD+ +L + G D Sbjct: 187 MNSLRSPASACSIVGFRPTRGQVSRSGIVPVTETQDAVGPMARTVRDARVLFDVMKGEDT 246 Query: 241 CDATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLD---YLSPTIDKTWQQGISWLK-DA 295 D V+ + R + +G + VG+ + + D +++T + +K D Sbjct: 247 GDQATVD--ELRHRRGQGGNGEGAIRVGVLRAFFADEDNVEGAMVNQTVLDALDKVKVDK 304 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 +I +SL + +P+ + ++ + +D + + S + Sbjct: 305 RIEIAPLSLQDATWDIPSLIATADMQSYEFRSVFDAFLRSPLIACTPHRTLESIVASGAY 364 Query: 356 GQE----VKHRIM--IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 QE V HR + G Y + Y S ++ ++ F E +D ++ P Sbjct: 365 HQEAVTPVLHRTLQTAGPYTMDGAEYRSRLETIGALKESVEACF---VEHRLDALVYPHQ 421 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPLGLQL 463 P+ G+M + + ++ G PAI +PA +P+GL+L Sbjct: 422 KQLVVPI-------GAMAQPQRN--GILASLTGRPAICLPAGFSPPTQSAPVGVPIGLEL 472 Query: 464 IGQPFREETLFSVGQIIE 481 +GQP+R++ L + + E Sbjct: 473 MGQPWRDDDLLDLAEHFE 490 >gi|109897834|ref|YP_661089.1| amidase [Pseudoalteromonas atlantica T6c] gi|109700115|gb|ABG40035.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Pseudoalteromonas atlantica T6c] Length = 448 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 122/462 (26%), Positives = 203/462 (43%), Gaps = 71/462 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ K ISA EL I+ NS +NA+I +A DK + +GI Sbjct: 17 IKDKQISAQELATEQHSFIKRVNSSINAFISYAMPNVEQSAS-FDKSL-------FQGIC 68 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 IG+KD +G T A G + ++ V +L G ++GKLNM E A+G++N+ Sbjct: 69 IGVKDNIDVRGFATTAGMATRVGRQAKQDAFVVSRLKQTGVQVMGKLNMHEGALGATNQN 128 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++G +P + +TPGGSSGGS+AAVA + S+GTDT GS+R PA++ G G Sbjct: 129 EHFGDCHNPHKH-----GYTPGGSSGGSAAAVASGMVGLSLGTDTMGSVRIPAAYCGIFG 183 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP+ G S G ++ + +D G + R+ +D + L + +DE A ++ + Sbjct: 184 FKPSRGAVSNHGTVTCSRVMDNIGPLARSAKDLTLALSVMKAFDEGCAASIDFSAFNRLS 243 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY--ALPA 313 D + + +P+ ++P I + ++ D G I + A A Sbjct: 244 YTDNKV----LLVPENLEQLGVAPDIAADFATNLTAFTDLGFSIQYFDFSGYDFGAARRA 299 Query: 314 YYIISPAEA--------SSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRI 363 ++ A+ ++N ++ G G+ +E K ++M + Sbjct: 300 GLLLCEADMRIEHQEDWANNQHKFSGYMRGMLSYIERKSPMDMMQ--------------- 344 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 S R D+ + AR++ F+QG IL PT AF EE Sbjct: 345 -------SERVLDNAKVFARQL-----------FKQGC-AILMPTVLQRAFAF--EEPVP 383 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + + T N AGLPA+S+P + +P G+Q++G Sbjct: 384 ANQADL-----TSFANQAGLPAVSLP-MFSDNPLPAGMQIVG 419 >gi|163758214|ref|ZP_02165302.1| amidase [Hoeflea phototrophica DFL-43] gi|162284503|gb|EDQ34786.1| amidase [Hoeflea phototrophica DFL-43] Length = 509 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 98/321 (30%), Positives = 157/321 (48%), Gaps = 20/321 (6%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++++ + L S +A +L + ++ ++ N NA I + +A A E DKR Sbjct: 8 LETLSIASISEGLASGSFTAEDLALASLEQVKKLNGTYNAII-LENPEALETAREIDKRR 66 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNGA 116 G+A L G+P+ +KD KG T A H+L P +S V ++ A Sbjct: 67 AAGEALGPLAGVPVVVKDPMDMKGFPTTAGWHLLYSKTGGVDLMPETDSPVVARMRAADA 126 Query: 117 VMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 V+LGK N+ + GS S+ GP I+ + D+ PGGSS G+++AVA +C Sbjct: 127 VILGKTNVPVLSHTGSHANDSWAGPTIN----VVMEDRL-PGGSSAGTASAVACNMCVVG 181 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 + +TGGSI+ PAS VGIKPT G G++ + + D G I RTV D+A L + Sbjct: 182 LAEETGGSIQNPASAHDLVGIKPTMGLVPNAGVVPLSGNRDVVGPIARTVADAASCLDVL 241 Query: 236 AGYDECD----ATCVNLPVPDYERALDQ-SIQGMTVGI-PKEYRLDYLSPTIDKTWQQGI 289 AG+ D A+ +P + + ++ G +G+ +R D LS +++ Sbjct: 242 AGWSAEDPKTLASVGKIPAGGFGSKMSTGALSGKRLGLYGPGWRPDTLSDEAIALYKRAQ 301 Query: 290 SWLKDAGAKIVEISLPHTQYA 310 + L DAGA ++E T +A Sbjct: 302 AELSDAGAILIEDPFAGTGFA 322 >gi|260433402|ref|ZP_05787373.1| putative amidase [Silicibacter lacuscaerulensis ITI-1157] gi|260417230|gb|EEX10489.1| putative amidase [Silicibacter lacuscaerulensis ITI-1157] Length = 466 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 211/488 (43%), Gaps = 77/488 (15%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--LE 72 +LR+ +SAVE++ + + I N ++NA + + + A A R +G AR L Sbjct: 14 KLRAGQVSAVEVMRATLDRIAQVNDRVNAIVALQDEDALMA----QARAADGHARHGPLH 69 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD GI + S + G P + + +L GA+++GK N EF +GS Sbjct: 70 GLPMAVKDLVNVAGIPSTQGSPLFRGHVPKTDDLIAARLRAAGAIVIGKTNTPEFGLGSH 129 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 YG +P+ S GGSSGG++ A+A + A + G+D GS+R PA++ Sbjct: 130 TFNPVYGATRNPYDLTRSC-----GGSSGGAAVALATGMLALADGSDMMGSLRNPAAWNN 184 Query: 193 TVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 G +PT+GR + + L G + R+ +D +LL ++G D ++ Sbjct: 185 VYGFRPTWGRIPSEPVGDLYLHQLSTLGPMARSPQDIGLLLDVMSGRDPRQPLSIDSEPV 244 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ---QGISWLKDAGAKIVEISL 304 PVP +S++GM +G ++ + P D Q + ++ + GA + E+ Sbjct: 245 SPVP------MESLEGMRIGWLGDWGGAF--PVEDGILQLCARELTLFAELGAVVEEVPP 296 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILE---MYENTRSIGFGQEV 359 P + +I R V GL+ + +D L+ ++E R + Sbjct: 297 PFDAERIWEAWIT---------LRSFSVAAGLQPLADRRDALKDSALWEMERGLAL---- 343 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-- 416 + L+A + R+ R F + D ++ P FP+ Sbjct: 344 ----------------TAMQLQAASVTRSDWHRRAVALFSE-FDALVLPAAQVWPFPVDW 386 Query: 417 -------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 G E ++ H + V T V++ GLP +S+PA +P+G+QL G Sbjct: 387 PYPRRIAGVEMDSY----HRWMQVVT-PVSLLGLPCLSIPAGFGPGGLPMGMQLFGPRGS 441 Query: 470 EETLFSVG 477 + L S+G Sbjct: 442 DARLLSIG 449 >gi|148254325|ref|YP_001238910.1| putative amidotransferase [Bradyrhizobium sp. BTAi1] gi|146406498|gb|ABQ35004.1| putative amidotransferase [Bradyrhizobium sp. BTAi1] Length = 473 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 118/479 (24%), Positives = 206/479 (43%), Gaps = 41/479 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D+L++ I+ ++ +D+ I + ++NA + +ARA A+ ++ + + L G Sbjct: 16 DKLKAGVITPLDCLDALEARITAVDDKVNALPTLCFDRARAHAKALMQKPV-AERGVLAG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD +G+ T S I P + L NG V+ K N EF G++ Sbjct: 75 LPVPIKDLTDVQGVLTTQGSPIFKDRIPEQSDLLVTHLEANGGVIYAKSNTPEFGAGANT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +PW T + G S G + A G A G+D GGS+R PASF G Sbjct: 135 FNEVFGATRNPW----DTSRSAAGSSGGAAVALATGMAWLAH-GSDMGGSLRNPASFCGI 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG++P++GR + ++ +L G + R V D A+LL A++G D + P + Sbjct: 190 VGLRPSFGRVAHTPAVAVDRNLGVQGPMARNVEDLALLLDAMSGEYAADPISLPSPTTSF 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A + + V + + + P + ++ + G IVE + P A Sbjct: 250 LAAARSGKRPVRVAYSPDLGITPVDPEVAAVTRKAAQRFTELGV-IVEEAHPDFSEAHEC 308 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ + + + A LR + +D+L+ EV I G + Sbjct: 309 FHVLRALDFAMSKAEL------LRTK-RDLLK-----------PEVIWNIEEGL-----K 345 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN--SGSMGHIYN 431 + RA R I FE D++L P T FP+ EN + GH ++ Sbjct: 346 LTVAQIARAEAQRVAITARAVRFFET-YDLLLAPATIVPPFPV---ENRYVAECAGHKFD 401 Query: 432 DV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + A+ +A PA+S+P +P+GLQ+I P + L + +++E G Sbjct: 402 NYVQWLGIVYAITLACCPALSLPCGFTASGLPVGLQVIAAPRADAQLLAGAKVLEDILG 460 >gi|330897914|gb|EGH29333.1| amidase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 255 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 127/245 (51%), Gaps = 9/245 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ R+R ++ + L + + AIE NS +NA+ +V A+ A A + G+ Sbjct: 4 VIEAATRVREGGLTPIHLTELCLAAIETHNSTLNAFGDVYAEAALEQAAGMTAELQRGEI 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALESVPVQDAPIIRRLKNAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AV+ + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNPW-----APSLTSGGSSSGSAIAVSARMVPAALGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITR+VRDSA+L ++G D D Sbjct: 179 GSFCGAFALKGTLGRIPTW-PWSATEMLSHAGPITRSVRDSALLFDILSGPDPLDHQA-- 235 Query: 248 LPVPD 252 LP PD Sbjct: 236 LPAPD 240 >gi|158426054|ref|YP_001527346.1| putative amidase [Azorhizobium caulinodans ORS 571] gi|158332943|dbj|BAF90428.1| putative amidase [Azorhizobium caulinodans ORS 571] Length = 497 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 134/469 (28%), Positives = 221/469 (47%), Gaps = 45/469 (9%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DAR 69 E R R+ +K+IS VE+++S + I N +NA + + A +ARAAA E++ ++ G D Sbjct: 11 ELRRRIGAKEISPVEVLESCLTRIALINPAVNAMVVLDADRARAAAREAEAAVMRGDDLG 70 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD KG+ T S I P + +L D GA+++GK N E++ Sbjct: 71 PLHGIPVAVKDAQDLKGVRTTYGSPIHADHVPAQDGACIARLRDAGAILIGKTNTPEWSA 130 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+++ +G +P+ D T GSSGGS+AA+A + + G+D GGS+R PA Sbjct: 131 GANSRNPVHGVTANPF---DLTRSAA--GSSGGSAAALACGMAPLASGSDMGGSLRNPAG 185 Query: 190 FTGTVGIKPTYGR-CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG++P+ G S I ++P L G + RTV D+A++L +A D D L Sbjct: 186 YCGIVGMRPSPGLVASDKRAIGWSP-LATDGPMARTVADTALMLSVMASDDARDPLAYTL 244 Query: 249 P------VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P P+ +++G+ + ++ I + ++ + + A+ VE Sbjct: 245 PDEPVRGRPERWVLPPVALKGLKLAFTDDFGFAPTEQHIRRVFRSRVGAISSLFAE-VEE 303 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 + P A A+ ++ +SN G Y T +G V+ Sbjct: 304 AAPDCTGADDAFAVLR----ASNFLASHGAGY--------------RTHPHMYGPLVRAN 345 Query: 363 IMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--- 418 + TY LS Y RA +T I R + F Q DV+++PT S P + Sbjct: 346 LEEALTYSLSD------YARAASAQTRIYRAYQAFFAQH-DVLVSPTITLSPRPWSESYP 398 Query: 419 -EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E + + + + AV +AG PA+S+P E +P GLQ++G+ Sbjct: 399 TEIDGVATQSYYHWLALAYAVTLAGHPAVSLPLGRDEAGLPFGLQIVGR 447 >gi|134291192|ref|YP_001114961.1| amidase [Burkholderia vietnamiensis G4] gi|134134381|gb|ABO58706.1| Amidase [Burkholderia vietnamiensis G4] Length = 470 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 131/473 (27%), Positives = 205/473 (43%), Gaps = 39/473 (8%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIP 75 R + S VE++ + + + N +N + A AAA ES++R + G+ L +G+P Sbjct: 17 RRRSFSPVEVICAVLDRVALFNPLVNGVCSLDEDSALAAARESERRWMRGEPCGLLDGVP 76 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD A +G+ T+ S ++ +L GA++ GK EF ++ Sbjct: 77 VSVKDLVAVRGLPTRYGSLTSPSAPEADDAPAVARLRQAGALLFGKTTTSEFGNKIVTDS 136 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 G +PW + T GGSSGGS+ AVA + S+ TD GGSIR PA ++G VG Sbjct: 137 LLTGITRNPW-----DRRLTSGGSSGGSAVAVALGMGPLSLATDGGGSIRVPACWSGVVG 191 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +KP++ R +S+ L G I R V D+A++L +A + DA PD Sbjct: 192 MKPSFNRVPAGAAVSWT-HLSTLGPIARCVSDAALMLTVMA--RQSDARSQAFVCPDLRI 248 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQYALPAY 314 LD I G+ + + P I + +Q +S + GA++ E ++ P Y Sbjct: 249 GLDDGIAGLRIAYCPAPAGVQVEPDITLSVRQAVSLFEALGAQVEETAVKPLDGYLESGM 308 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + I A + AR +++ D+ + E G V +S Sbjct: 309 HAIQWAVFFAQRARQLSPSARRQLD-PDVCALAEA----------------GDSVPTSTF 351 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 D+ L+AR T+ F E + D++LTPT A PL + M Sbjct: 352 VDA--LQARHTLTVAMAAFFEDY----DLLLTPTF-HCAPPLAQGRPEHSRMAP----PL 400 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T N GLPA SVP L +P GLQ+IG + + + E G F Sbjct: 401 TSWCNQTGLPAASVPCGL-PGGLPTGLQIIGPSGSDALVLRAARAYECARGPF 452 >gi|317159010|ref|XP_003191029.1| amidase [Aspergillus oryzae RIB40] Length = 525 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 143/291 (49%), Gaps = 38/291 (13%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 S+V+LV +Y+ I NS + +EV A +R+ +L G+PI +KD Sbjct: 48 SSVDLVKTYVARINEVNSTLRPILEVNPDALHEAEVLDGERLYGLSRGELHGMPILVKDN 107 Query: 82 FATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 T + T A S+ L R ++T +KL ++GA++LGK TS Y P Sbjct: 108 IGTADKMQTTAGSYALYDSRVREDATAVRKLKEHGAIILGK-------------TSAYHP 154 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 + P GSS GS+ AV L A++GT+T GSI P+ VGI PT Sbjct: 155 MQDP------------EGSSSGSAVAVDLGLAVAALGTETMGSILFPSEVNNIVGITPTV 202 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---VPDYERA- 256 G SR G+I + D G + RTVRD+A +L AIAG D D + P VP Y A Sbjct: 203 GLTSRYGVIPISEHQDTIGPMARTVRDAAWVLGAIAGRDGRDNYTLASPHPSVPFYVGAC 262 Query: 257 -LDQSIQGMTVGIPKEYRLDYLSP-----TIDKTWQQGISWLKDAGAKIVE 301 LD+ +QG +GIP+ L +L+ + ++ IS L +AGA IV+ Sbjct: 263 QLDR-LQGKRIGIPRNV-LPFLAMEPHGLAVLSAFEAAISVLTEAGATIVQ 311 >gi|241663052|ref|YP_002981412.1| amidase [Ralstonia pickettii 12D] gi|240865079|gb|ACS62740.1| Amidase [Ralstonia pickettii 12D] Length = 494 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 131/495 (26%), Positives = 210/495 (42%), Gaps = 63/495 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKR 62 + + A+ SR R+ ++D+S VE++++++ I+ N +NA + + + A A E D Sbjct: 19 VQWSAIELSR-RIHARDVSCVEVMEAFLAQIDRHNPTVNAVVARIDGESAIDQARERDVL 77 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G + + G P KD AT G+ T S + P ++S V +++ G V++GK Sbjct: 78 LSQGLSGGWMHGFPQAPKDLAATAGMVTAMGSLAMARNVPTHDSIVVERIRRQGTVLIGK 137 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS YG + W S GGSSGG++AA+A + + G+D Sbjct: 138 TNTPEFGLGSHTYNRVYGTTRNAWNPERSA-----GGSSGGTAAALALNMLPVADGSDMM 192 Query: 182 GSIRQPASFTGTVGIKPTYGRC--SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GS+R PA++ G++P+ GR G + F L G + R +D A LL AGYD Sbjct: 193 GSLRNPAAWNNIYGLRPSLGRVPYGPTGDVFFQ-QLGTEGPMARDPQDLAWLLATQAGYD 251 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 P +L + +++R Q I WL D G + Sbjct: 252 -----------PRAPLSLSDDPACFMQPLHRDFR------------QARIGWLGDFGGYL 288 Query: 300 ---VEISLPHTQYALPAY-------YIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 E+ L ++AL + + P A L L V G L +Y N Sbjct: 289 AIDAEV-LAVNEHALDTFDTLGCHVETVRPFFAMDALWECWCTLRALSVSGNLGL-LYAN 346 Query: 350 --TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 TR + E I G + + RA + L+ R F D ++ P Sbjct: 347 AATRDL-LKPEAIWEIEHGRSRTAIDINRAIATRASWYQALL-RQFAH-----YDFLVLP 399 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGL 461 T + FP EE+ ++ D + + +AG+PA S+P+ L +PLGL Sbjct: 400 CTQVAPFP--AEEHWPKAVAGRAMDTYHRWMEVVIGATLAGVPAASLPSGLTADGLPLGL 457 Query: 462 QLIGQPFREETLFSV 476 Q+I P E L + Sbjct: 458 QVIAPPRSEFALLQL 472 >gi|295396576|ref|ZP_06806733.1| possible amidase [Brevibacterium mcbrellneri ATCC 49030] gi|294970591|gb|EFG46509.1| possible amidase [Brevibacterium mcbrellneri ATCC 49030] Length = 496 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 126/492 (25%), Positives = 209/492 (42%), Gaps = 44/492 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + ++ + L K++SA ELVD++ I+ N Q+NA + + +AR A++ D Sbjct: 24 MDTYTYTSLRYTAQALSRKEVSATELVDAHFARIDAINPQVNAVVTLDQDRARQTAQQID 83 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +G L G+P+ KD G+ T S I H + + ++ + G + Sbjct: 84 NDRASGKTLPPLAGVPMTHKDTHEAAGMRTTWGSPIYKDHVSHTDDLIIARMREAGIIPT 143 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ EFA G+ +G ++P+ + S SSGG++ +A + AA G+D Sbjct: 144 GKTNVPEFAAGAHTFNPVFGTTVNPYNTTKSAAG-----SSGGAAVVIAAGVQAAGDGSD 198 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PASF G++P+ G L + + Q+G + R V D A+L+K +G Sbjct: 199 MGGSLRFPASFNNIAGLRPSNGWLPHLAPKNPYGWIAQSGFMAREVADIALLMKLASGPH 258 Query: 240 ECDATCVNLPVPDYERALD-----QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 V P A D +++ G+ VG + L + Q + + D Sbjct: 259 PAGPVAVP---PGSSTAWDDALTAENLTGVRVGFSTD-----LGGRVQVDAQ--VRHVID 308 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 A A++ H A P + A L R +G R E YE Sbjct: 309 AQAEVFAGLGAHVTGACPDLDV---ARRLFRLERAFEFAFGFR-------EAYEL----- 353 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G +K + + + H+ R R +R L+ E F+ DV + T+ F Sbjct: 354 HGDLMKESLRTNIEAGLAMTPEEHFERVR-LRGLMWPALAEFFDTH-DVFVCTTSQVLPF 411 Query: 415 PLGKEENNSGSMGHIYNDVFT-----VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 EE + G + D + ++ G PAISVPA E +P+G+Q++G+P Sbjct: 412 D-ASEEFPTHINGEVMEDYLSWMESATLISATGCPAISVPAGFSEDGLPVGVQIVGRPGA 470 Query: 470 EETLFSVGQIIE 481 + + V E Sbjct: 471 DAHVLRVAAAYE 482 >gi|76364074|sp|P84650|AMID_RHORH RecName: Full=Enantioselective amidase Length = 517 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 117/416 (28%), Positives = 189/416 (45%), Gaps = 32/416 (7%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 D L G + IKD G+ S +++GF P Y++TV ++L D GA GK ++ Sbjct: 84 DGGPLAGRTVAIKDNVTVAGVPMMNGSRVVEGFTPRYDATVLRRLLDAGATKAGKAVCED 143 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 S+ TS+ PV +PW D + + GGSS GS A VA ++G D GGSIR Sbjct: 144 LCFSGSSVTSHPQPVRNPW---DESHGYKAGGSSSGSEALVASGHVDCAVGGDGGGSIRI 200 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P + G VG KPT+G + ++D G +TRTV D+A++L +AG D D Sbjct: 201 PLACCGIVGCKPTHGL--KPYTFPIERTIDHLGPMTRTVGDAAMMLTVLAGTDGLDPRQA 258 Query: 247 NL---PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + PV DY AL + V + + + +D + I L+ + +S Sbjct: 259 DHRIEPV-DYLAALAEPAGLRVVVVTEGFDTPVQDAAVDDAVRAAILVLRSGCLTVEIVS 317 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKH 361 +P A + +I+ A+ + DG YG+ G L ++ + R + G ++ Sbjct: 318 IPIHLDAFAVWNVIATEGAAYQM--LDGNYYGMNTGGFYDPELIIHFSRRRLEHGHQLSK 375 Query: 362 RI----MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA---- 413 + M G Y S + AR++ ++ + A + DV++ PT P +A Sbjct: 376 TVKLVGMGGRYT-SETGGGKYAAAARQLVREVRAAYDLALAR-YDVLVMPTLPYTATKIP 433 Query: 414 ---FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PL + + SM I N T ++ G PA+ P A +P+G+ +IG+ Sbjct: 434 ITDIPLADYLDTALSM--IIN---TAPFDVTGHPAL-CPVAGAVHGLPVGMMIIGK 483 >gi|89052917|ref|YP_508368.1| amidase [Jannaschia sp. CCS1] gi|88862466|gb|ABD53343.1| Amidase [Jannaschia sp. CCS1] Length = 440 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 99/351 (28%), Positives = 153/351 (43%), Gaps = 39/351 (11%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGI 78 D+ V L + Y+ I+ S Y +A A A + R G R L +G+PI Sbjct: 19 DVDPVALTEGYLDVIKASPFGDRIYARTTRDRALAEAIAAHDRAKAGVRRGLLDGVPISW 78 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA---MGSSNET 135 KD F T G+ T+A S++L+G P ++ V G V LGK +M E A +G + T Sbjct: 79 KDLFDTAGVVTEAGSNLLEGRVPDKDAEVLANATRAGLVCLGKTHMTELAFSGLGVNPST 138 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + +P + D + PGGSS G++ +VA + AA IG+DTGGS+R P+++ VG Sbjct: 139 A------TPPNANDP--ELAPGGSSSGAATSVAYGMAAAGIGSDTGGSVRLPSAWNDLVG 190 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP++G S G++ A S D G + RTV D A L + D Sbjct: 191 FKPSHGALSLDGVVPLAASFDTVGPLCRTVEDCAELFAVMGNTKAADLAGA--------- 241 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 S+ G + + Y D + +Q + L AGA I +P A+ Sbjct: 242 ----SLDGTRLLVLNPYASD-VRDAPGAAFQSAVERLSTAGALIENADIPAVNEAMDTTL 296 Query: 316 IISPAEASSNLARY-------------DGVRYGLRVEGKDILEMYENTRSI 353 + AEA + D R G V+ D + +++ R++ Sbjct: 297 SLYTAEAYGTWGKVIEANPDKMFHRIRDRFRQGAEVKAADFVALWQRLRAL 347 >gi|284047251|ref|YP_003397591.1| amidase [Conexibacter woesei DSM 14684] gi|283951472|gb|ADB54216.1| Amidase [Conexibacter woesei DSM 14684] Length = 476 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 134/498 (26%), Positives = 209/498 (41%), Gaps = 77/498 (15%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L F VSE +RS ++SA ELV + ++ I+ + Q+NA+ V A A AAA+ Sbjct: 1 MHDLMFRPVSELAALVRSGELSARELVSASLERIDALDGQINAFTHVGADGALAAADAIG 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G+PI IKD +G+ ++ P +E ++L G V++G Sbjct: 61 ADD----PRPFAGVPIAIKDNRPVEGMPLTMGANAFGDLVPPFEMAFVRRLRAAGFVIVG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + E+ + + E+ GP +PW + SSGG++AAVA + + G D Sbjct: 117 KTALPEYGIQPTTESVRNGPTRNPWDLSRTAGG-----SSGGAAAAVAAGMVPIAHGNDG 171 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA+ G VG+KP GR S L + L G++TRTV +SA LL +AG + Sbjct: 172 GGSIRIPAACCGLVGLKPARGRIS-LAPVEGESFLVTDGVLTRTVAESAALLDLLAGPEA 230 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG----ISWLKDAG 296 D + P + + ++ + +G R ID Q + L++ G Sbjct: 231 GDTSWAPPPSEPFAQTAARTPGRLRIGF--TLRPPLTETAIDPIAAQAVFDTVELLRELG 288 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++ EI P +A+P +LE++ S FG Sbjct: 289 HEVEEIDPP---WAIPG-----------------------------MLELF----SAAFG 312 Query: 357 QEVKHRIMIGTYVLS------------------SRCYDS-HYLRARKIRTLIKRDFTEAF 397 V I+I + SR D+ HYL A + R A Sbjct: 313 PAVGSAIVIAGTIAGRELTADDMEPLSWMLWERSRKLDAPHYLAAIGQLQALARTLVTA- 371 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN-----DVFTVAVNMAGLPAISVPAAL 452 D +LTP+ P+G + + FT N+ G PAISVP + Sbjct: 372 TAACDAVLTPSLAQRPVPIGALSGATDDPVGTFRRGGEFTPFTAIANVTGQPAISVPISH 431 Query: 453 CEKKMPLGLQLIGQPFRE 470 + +P+G+ G+P +E Sbjct: 432 GDDGLPVGVHFFGRPAQE 449 >gi|296161882|ref|ZP_06844683.1| Amidase [Burkholderia sp. Ch1-1] gi|295887901|gb|EFG67718.1| Amidase [Burkholderia sp. Ch1-1] Length = 474 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 133/496 (26%), Positives = 217/496 (43%), Gaps = 59/496 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK---ARAAAEES 59 +L + E ++ R+ + S VE++ + +Q IE + +NA+ + ARA+ Sbjct: 4 DLCELTAQELQELYRNGNASPVEVMAAVLQRIERLDPAVNAFCQTAPDALDMARASETRW 63 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G L+G+PI +KD A G+ T+ S + D ++S +L ++GA+ Sbjct: 64 QRKRPLGP---LDGVPISVKDNVAVAGLATRYGSRVTDETPAPHDSPCVARLRESGAICF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K + +FA ++ G +PW TD+ TPGGSSGG++AAVA + A+IGTD Sbjct: 121 AKTTLPDFAHKIVTDSPLTGVTRNPW----DTDR-TPGGSSGGAAAAVALGMAPAAIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PA+FTGT G KP++GR F L G +TR V D+A +L I+ D Sbjct: 176 GGGSIRIPAAFTGTFGFKPSFGRVPHAPRGPFG-LLSHIGPMTRCVADAARVLTVISRPD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSP--TIDKTWQQGISWLKDAG 296 D + DYE L+ V I L ++P + + + +D G Sbjct: 235 SRDWYALPFDASDYELGLNCKPTPGGVRIASSPSLGLAITPETAVHDAVMRTVDTFRDLG 294 Query: 297 AKIVEISLPHTQYALPAYYIISPA---EASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 A++ P + I P+ + + +A DG G ++ L+ Y + Sbjct: 295 ARVQPEDPPGIARCNSIHATIWPSCCRQLTEGMA--DG---GAALDPS--LQAYSDA--- 344 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD----FTEAFEQGVDVILTPTT 409 G + + ++G LI+R AF + D+++ P Sbjct: 345 --GASISRQALLG--------------------ALIERGELGAAVNAFFERYDLVICPVY 382 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P A PL + H FT N GLPA SV + +P+G+Q++G Sbjct: 383 PRVAMPLAELRATDPLFPH-----FTAWCNQLGLPAASVYTGTTSEGLPVGIQIVGGRHA 437 Query: 470 EETLFSVGQIIEKEAG 485 + + I+E G Sbjct: 438 DALVLWASHILELAFG 453 >gi|261406818|ref|YP_003243059.1| Amidase [Paenibacillus sp. Y412MC10] gi|261283281|gb|ACX65252.1| Amidase [Paenibacillus sp. Y412MC10] Length = 499 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 158/507 (31%), Positives = 231/507 (45%), Gaps = 73/507 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 + S + ++ LV +YI+ I N +NA +E+ A +R G L GIP Sbjct: 21 MSSGECTSEALVLAYIERIHRYNPLINAVLEINPDALEIARNLDLERNTTGSRGPLHGIP 80 Query: 76 IGIKDCFAT-KGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 I +KD T +HT A S L + F P ++ V KL GAV+LGK NM E++ SN Sbjct: 81 ILLKDNIDTYDRMHTSAGSIALAESFAPE-DAFVAAKLRAAGAVLLGKANMTEWSNFMSN 139 Query: 134 E-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +S G V++P+ K GSS GS+AAVA L AA+IGT+T GSI PA Sbjct: 140 RMPAGYSSRGGYVLNPY----GPGKLFVSGSSSGSAAAVAANLTAAAIGTETAGSIIGPA 195 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA---TC 245 S VGIKPT G SR GII + S D G I++TV D+AILL AI G+DE D T Sbjct: 196 SQHLLVGIKPTVGLTSRSGIIPISISQDTPGPISKTVTDAAILLGAIVGFDENDKATWTS 255 Query: 246 VNLPVPDYERALDQSIQGMT-VGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAKIVE- 301 + DY LD+ T +GIP+ Y LD +I + I+ L++ GA +++ Sbjct: 256 THRTFHDYTTYLDRDFLCKTRIGIPRHYYRSLDEERLSI---MESAINVLREQGATVIDP 312 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTR---SIGFGQ 357 + L Q+ P + E + L RY + L V L Y ++ FGQ Sbjct: 313 VDLHLEQH--PWNNDVICYEFKTGLNRYFSKLNSDLPVHSLQDLIAYNQKHAASALKFGQ 370 Query: 358 E-----VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + ++ + TY L + Y+ H + I ++ + G+D ++ P Sbjct: 371 DNLIRSEQNALNETTYQLKRQEYN-HPAVTQGIDYVLD-------QHGLDALMLP----- 417 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK----------KMPLGLQ 462 G + +Y +A + G P I+VPA K + P G+ Sbjct: 418 -----------GDVDGMY-----IAARL-GYPLITVPAGYSAKGTIDADGDSTQGPFGVV 460 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRP 489 G+ E TL S+ E+ + RP Sbjct: 461 FSGRALSEPTLISIAYSFEQATLFRRP 487 >gi|227522609|ref|ZP_03952658.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus hilgardii ATCC 8290] gi|227090189|gb|EEI25501.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus hilgardii ATCC 8290] Length = 488 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 124/519 (23%), Positives = 221/519 (42%), Gaps = 76/519 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + ++ + + + IS +L+ + IE N ++NA + ++AR A + Sbjct: 10 SATQLTNLIHNHQISRADLLQQLLDTIEKQNPRLNAVTHLWPERARQMAAH-----FKDE 64 Query: 68 ARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + GIPI +K + KG S +L + + + L G + +G+ N E Sbjct: 65 GQPFAGIPILLKGLGQSFKGEIDSGSSQLLRDYIAPETNNFVKGLLSAGLIPVGETNAPE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F + ++ YG +PW + + PGGSSGGS+AAV + G D GGSIR Sbjct: 125 FGFKNITDSKLYGNAHNPWNT-----DYQPGGSSGGSAAAVGDGWLPIAAGNDGGGSIRI 179 Query: 187 PASFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 P+SF+GT+G+KPT GR + I+FA ITR ++D+A LL A++ Sbjct: 180 PSSFSGTIGLKPTRGRVPTGPNEWRGWQGASINFA--------ITRDIQDTAKLLDALSV 231 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAG 296 + LP D+E L++ + + + + ++ +S + + +L+ AG Sbjct: 232 VQMSAPFQIPLPDHDFESTLNELPKNLKIAFSTKSPVNTPISNEAKRAVNNAVGFLEKAG 291 Query: 297 AKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 I E+ P L YY ++ E ++ A D D +++N + + Sbjct: 292 YDITEVDAPIDGIQLMQTYYTMNAGETATMFANMD----------LDSQTIHDNVEPLTW 341 Query: 356 GQEVKHR-IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V + + +Y + +D + T+ + F D+ LTPTT A Sbjct: 342 ALNVTGKSVSAVSYSQALAFWD------QAAATM------DTFSDQYDLYLTPTTAFQAP 389 Query: 415 PLGKEENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAISVPAA 451 + ++ + +M + N FT N++G PAIS+P Sbjct: 390 KVDQQLVSDQNMEKLINIKEFAPNERLQIIWDQWLPALTISPFTQLANISGQPAISLPTY 449 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 + +PLG+Q + + RE+ L +G++ EK + H Sbjct: 450 VGNNGLPLGIQFMAKKGREDLLLQIGRLFEKADTFKLKH 488 >gi|294055598|ref|YP_003549256.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221] gi|293614931|gb|ADE55086.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221] Length = 574 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 135/473 (28%), Positives = 205/473 (43%), Gaps = 69/473 (14%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + +S + S +++ +LV +Q I +N + E + E SD Sbjct: 4 LTISTLQASYASGELTPRKLVKELLQKIAAADNPAVWIYPLTEAELEPYLQRLESSDPST 63 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + L GIP IKD + T A G+ P + V +KL GA+ +GK N Sbjct: 64 L-----PLYGIPFAIKDNIDLACVPTTAACEAY-GYTPELSAPVVEKLLQAGAIPMGKTN 117 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +D+FA G S YG +P + D+ PGGSS GS+ A++ L + S+GTDT GS Sbjct: 118 LDQFATGLVGVRSPYGVPRNPI----APDR-VPGGSSSGSAVALSEGLVSFSLGTDTAGS 172 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA F G+KP+ GR S G++ +LD I D +LK G+D DA Sbjct: 173 GRVPAMFNKLWGLKPSRGRLSTSGVVPACRTLDCVSIFALNAGDGQEVLKVAEGFDSADA 232 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEI 302 P + AL +S + +G+PK +L + S W + + L+ G IVE+ Sbjct: 233 YS----QPTRDVALPKSKR---LGVPKPEQLLFFSDVDYQPVWLKALDDLRAQGWDIVEV 285 Query: 303 SL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-----MYENTRSIGFG 356 P + A Y +E ++ L KD LE + TRSI Sbjct: 286 DFEPFLKAARLLYEGPWVSERTTAL--------------KDFLESNADDFFPATRSI--- 328 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP- 415 IG V ++ C + K+ L KR+ +EA +G+ I+TPT FP Sbjct: 329 --------IGGGVGNTAC--EAFAATYKLADL-KRE-SEAVWRGLTAIVTPT--AGGFPS 374 Query: 416 LGKEENN----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L E + + +G+ +T +N+ L A++ PA E +P GL I Sbjct: 375 LADLEADPIGPNSQLGY-----YTNFMNLLDLCAVAAPAGETESGLPFGLTWI 422 >gi|326912869|ref|XP_003202768.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Meleagris gallopavo] Length = 522 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 133/497 (26%), Positives = 226/497 (45%), Gaps = 57/497 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIEN---SNSQMNAYIEVVAQKARAAAEESD 60 +F + + D S ++ ++ + I +E+ S + A ++ ++ AE S Sbjct: 49 FSFKGIKDYLDCYWSGKLTPSQVAKNIIAVLEDCDKSTPPLRAIVQWDQEQIMLMAEAST 108 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVM 118 R N L+GIP+ +K+ F + + + L G P E +TV +KL + GAV+ Sbjct: 109 ARYRNKCPLSYLDGIPVCLKEEFKVVPYYHRVGTVYL-GTEPETEDATVAKKLREAGAVI 167 Query: 119 LGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +G NM E G++ N Y+ +P++ + FT GGSS GS+AAVA LC +I Sbjct: 168 IGVSNMHELGTGTTGCNPNRYHKIPRNPYKP----NHFT-GGSSSGSAAAVAAGLCPVAI 222 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTD GGS+R PASF G VG+K T+GR S G + + S G I +V D+AI+ +A Sbjct: 223 GTDGGGSVRIPASFCGVVGLKGTFGRISGHGSLPLSYSTVSVGPICTSVADAAIVYSILA 282 Query: 237 --------GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 G + AT ++ PD ++G+ +G+ + I ++ Sbjct: 283 EPDPLYPYGLKQPKATLSDMCAPD--------LKGLKLGVDWTF-FKACDAEILSVCEKA 333 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + +L++ GA +VE+SLP + A+ I + E +D L+ Sbjct: 334 MEYLQNLGASVVEVSLPEMEEVKIAHAIC------------------ILSEMRDFLQPDF 375 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N E + + +G S+ Y+ A + RT R E F V+ ILTP Sbjct: 376 NKHFQEMNLETRASLALG-----SQFTALDYITANRQRTRSMRFLREIFTT-VNCILTPA 429 Query: 409 TPTSAFPLGKEENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 ++A + + + +GS + + F N G+P + VP +P+G Q++ Sbjct: 430 VASTAPRIHESDLLTGSSNISFTMRSMRFMQLGNFTGIPGLVVPIGYSTAGLPIGFQVMA 489 Query: 466 QPFREETLFSVGQIIEK 482 + + E L +G +E+ Sbjct: 490 KWWDEAVLLRIGLKLEQ 506 >gi|307136177|gb|ADN34018.1| amidase [Cucumis melo subsp. melo] Length = 332 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 142/261 (54%), Gaps = 24/261 (9%) Query: 26 LVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-----DLEGIPIGIKD 80 LVD Y++ IE N + + +EV +AR A+++D+R +G+ + L+G+P+ +KD Sbjct: 55 LVDFYLKQIEALNPVLRSVVEV-NPEARDEADKADRRRRDGNVKRLSLGGLDGVPVLVKD 113 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF----AMGS--SN 133 ATK ++T A S+ L G ++ V +KL GAV+LGK ++ E+ ++G + Sbjct: 114 TIATKDRMNTTAGSYALVGSVVARDAGVVEKLRKAGAVILGKASLSEWYSFRSLGHVPNG 173 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + G ++P+ + T GSS GS+ +VA + S+GT+T GSI P+ Sbjct: 174 WCARAGQAVNPYLASGET-----CGSSSGSAISVAANMVTVSLGTETHGSILCPSDRNSV 228 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VG KPT G +R G+I S D G ITRTV D+ +L AI GYD DA + + Sbjct: 229 VGFKPTVGLTTRAGVIPIMSSHDTVGPITRTVSDAVYVLDAIVGYDPRDAEATSEGSKFI 288 Query: 249 PVPDYERALD-QSIQGMTVGI 268 P+ Y++ L+ +G +G+ Sbjct: 289 PLGGYKQFLNPNGSKGKRIGV 309 >gi|256058831|ref|ZP_05449047.1| amidase [Brucella neotomae 5K33] gi|261322769|ref|ZP_05961966.1| amidase [Brucella neotomae 5K33] gi|261298749|gb|EEY02246.1| amidase [Brucella neotomae 5K33] Length = 463 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 131/493 (26%), Positives = 218/493 (44%), Gaps = 39/493 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L ++ E ++K +S VE+ ++ I IE ++NA + R AA+ S+ Sbjct: 1 MSHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAVRLAAKASE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G+ A ++G+P+ IK+ ATKG L ++ + + G V+L Sbjct: 61 ARWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPPAARTREAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M + M SS +S++ +PW + PGGSS G+ +A A IGTD Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN-----PGGSSAGAGSAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA + G VG+KP++GR I P L + AG +TRTV D+A+ + ++ Sbjct: 176 IGGSVRLPAGWCGLVGLKPSFGR-----IPIDPPFLGRVAGPMTRTVADNALYMSVLSRP 230 Query: 239 DECDATCVNLPVPDYE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D ++LP D + LD ++G+ +G+ +D + + + G Sbjct: 231 DRRDG--MSLPYQDIDWMNLDIEVKGLKIGL-----------WLDAGFGEPVG----GGE 273 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFG 356 + +A A II P N +G+ R+ DI +M ++ Sbjct: 274 TRAAVEAAAKLFA-DAGAIIEPVAPFLNRTMINGLDRFWRARSWSDIKKMTPENQA---- 328 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ I T + YL ++ + R+ A + D I++PT P +P Sbjct: 329 -KILPYIYQWTETAEGLSGEEAYLGFAQMDAM--RNAALAASKDFDFIISPTAPMPTYPA 385 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + FTVA+NM+ PAIS+ K +P+GLQ+ GQ F + + + Sbjct: 386 EWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAKGLPIGLQIFGQRFDDLGVLRL 445 Query: 477 GQIIEKEAGYFRP 489 + E RP Sbjct: 446 AKAYEDMRPVQRP 458 >gi|254439713|ref|ZP_05053207.1| Amidase, putative [Octadecabacter antarcticus 307] gi|198255159|gb|EDY79473.1| Amidase, putative [Octadecabacter antarcticus 307] Length = 465 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 126/467 (26%), Positives = 215/467 (46%), Gaps = 53/467 (11%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGI 78 DI VEL + Y+ AI+ + Y V A +AR+ A + R G L+G+PI Sbjct: 43 DIDPVELCEVYLAAIDAHPMRDRIYARVTADRARSEAAAARMRAKAGQRLSPLDGVPISW 102 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F T G+ T+A + +++G P ++ V + G V LGK +M E A Y Sbjct: 103 KDLFDTAGVATEAGTKLMEGRVPSRDAEVLRVATGMGLVCLGKTHMSEIAFSGLG----Y 158 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 P+ + ++ D PGGSS G++A+VA L AA++G+DTGGS+R P+ + VG+K Sbjct: 159 NPMTATPPCVNDPDA-VPGGSSSGAAASVAFGLAAAAVGSDTGGSVRVPSVWNDLVGLKT 217 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T+GR S G ++ + D G + R+V D+A++L A+ G D T Sbjct: 218 TFGRLSVAGSVALCTTFDTVGPLCRSVEDAALMLAALEGGRSADLT-------------G 264 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 S++GM + +D ++ + ++ L AGA+IV + +P + A + Sbjct: 265 ASLKGMRFAALRSVVMDNVADASLAGYDAALTKLAVAGAEIVPLEVPALERAFAMSLPLY 324 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 A+A +N +D++E + ++ R+ G VL+ Y S Sbjct: 325 TADAYANW--------------RDLVEANPDK----MYHQILQRVQGGKDVLAHE-YLSL 365 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV-- 436 ++ R IR + D T F D +L P + P E S + ++ ++ T+ Sbjct: 366 WVELRDIRG-VYADATAGF----DAVLCPG--AANMPPNLERLASDADYYLQENLLTLRN 418 Query: 437 --AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+ GL ++++P + +G+ L +E L +G +E Sbjct: 419 TRVANLMGLASLALPTGVPS----VGIMLNVAGGDDERLLRIGAAVE 461 >gi|149203464|ref|ZP_01880434.1| amidase family protein [Roseovarius sp. TM1035] gi|149143297|gb|EDM31336.1| amidase family protein [Roseovarius sp. TM1035] Length = 441 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 116/415 (27%), Positives = 185/415 (44%), Gaps = 52/415 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+P+ KD F + G+ T+A S +L G P ++ V + G V LGK +M E A Sbjct: 66 LDGVPVSWKDLFDSAGVATEAGSALLKGRVPERDAEVLRNGTAAGLVCLGKTHMSELAFS 125 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 PV + ++ D PGGSS G++A+VA L IG+DTGGS+R PA++ Sbjct: 126 GLG----LNPVTATPPCVNDPDA-VPGGSSSGAAASVAFDLAPCGIGSDTGGSVRIPAAW 180 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+K T GR S G++ D G + R+V D A++L A+ G D Sbjct: 181 NDLVGLKTTSGRVSLQGVVPLCLRFDTVGPLARSVEDCALMLAALDGRKAADLR------ 234 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 S+ G+ + + ++ + P + + L+DAGA I EI P A Sbjct: 235 -------GASLLGLRFAVLRTGVMEDIRPEPARAHAAALEMLRDAGAVIDEIEAPEVAEA 287 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 LP ++ + G YGL ++++E + + R G + Sbjct: 288 LPLSPVL-----------FTGEAYGL---WREVIEAAPDK----MFAPILERFRSGKDI- 328 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 S+ Y + + RK+ L R A G D +L P+ P P + + ++ Sbjct: 329 SAADYVAGW---RKLEAL--RAAWTARVAGYDAVLMPSAPN--LPPDQARLLADPDYYVT 381 Query: 431 NDVFTV----AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ T+ N+ GL A+++P + GL L GQP+ EE L V Q +E Sbjct: 382 ENLLTLRNTRVGNLLGLCAVTLPTGVPS----CGLMLCGQPYGEERLLRVAQAVE 432 >gi|120436586|ref|YP_862272.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gramella forsetii KT0803] gi|117578736|emb|CAL67205.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gramella forsetii KT0803] Length = 544 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 142/501 (28%), Positives = 222/501 (44%), Gaps = 73/501 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAI-----ENSNSQMNAYIEV---VAQKARAAAEES 59 ++ E ++ + S ++ ELV Y+ I EN S +N+ I + + ++ARA ++ Sbjct: 82 SIPEIQEAIESGKLTYEELVLFYLTRIMEYDRENEFS-LNSVISLNPNIIEEARAKDQQK 140 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K + + GIP+ +KD T G T A S L + ++ + ++L +NGA++L Sbjct: 141 SKA---SNRHPIYGIPVLLKDNINTTGTPTTAGSVALQNNQTE-DAFIVKQLKNNGALIL 196 Query: 120 GKLNMDE----FAMGSSNETSYYG-PVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GK N+ E F G N S G ++P+ R + T GGSS GS AVA Sbjct: 197 GKANLSEWANFFCEGCPNGFSTIGGQTLNPYGRKVHDT-----GGSSSGSGVAVAANFAP 251 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++G++T GSI PAS VG+KPT G SR GI+ + +LD G IT+ V D+AILL Sbjct: 252 VAVGSETSGSILSPASSNSVVGLKPTIGVLSRGGIVPISSTLDTPGPITKFVIDNAILLD 311 Query: 234 AIAGYDECDATCVNLPVPD---YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 A+ G D D + + Y ++ G+ K D L + + I+ Sbjct: 312 AMKGVDNEDVSSKGAGKQNSVYYSNIKKADLKDKRFGVIKALMDDSL-------YVRAIN 364 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-N 349 LK AGA+IVE LP + + + +L Y YG V K++ ++ + N Sbjct: 365 DLKKAGAEIVEFEAEDID--LPNFRRLLNLDMKKDLPAYLK-NYGGDVSYKNVQDVVDYN 421 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAFEQ-----GVDV 403 T Q+ +R G + DS + I+ +K + T FE+ +D Sbjct: 422 T------QDSLNRAPYGQALFMGILKDSASEKDFSAIKDTLKTNGTRFFEKPMKELDLDA 475 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +L+ N+ +A PAI+VP + P GL Sbjct: 476 VLS-----------------------INNYHAGYAAVAKYPAITVPMGYSSENQPRGLTF 512 Query: 464 IGQPFREETLFSVGQIIEKEA 484 IG+PF EE L I EK + Sbjct: 513 IGKPFTEEQLLQFAYIFEKNS 533 >gi|15897667|ref|NP_342272.1| glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus solfataricus P2] gi|284174992|ref|ZP_06388961.1| glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus solfataricus 98/2] gi|6015711|emb|CAB57538.1| glutamyl-tRNA amidotransferase, subunit A [Sulfolobus solfataricus P2] gi|13813938|gb|AAK41062.1| Glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus solfataricus P2] gi|261602435|gb|ACX92038.1| Amidase [Sulfolobus solfataricus 98/2] Length = 398 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 132/462 (28%), Positives = 202/462 (43%), Gaps = 78/462 (16%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 +E NS+ NA+I + EE + D L+ + GIKD TK + T A S Sbjct: 3 LEELNSKYNAFITL------HTIEEGN------DKGKLKDVTFGIKDVILTKDVRTTAGS 50 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDK 153 +L+ + P + V + G ++GK N EFA+G++N +S GP +P + Sbjct: 51 RVLENYVPQRNAYVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVDP-----E 105 Query: 154 FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP 213 GGSSGGS+ AV + IGTDTGGS+R P+S G +G KPT G G+I F+ Sbjct: 106 RISGGSSGGSAVAVKLDMVDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPNDGVIPFSW 165 Query: 214 SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR 273 SLD GII V+D+ LL+ + ++ +P+ +R ++ I K Sbjct: 166 SLDTVGII---VKDNIRLLRRV----------FDVVLPNEKRKVE---------IAKLRT 203 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAK------IVEISLPHT-QYALPAYYIISPAEASSNL 326 L + + LKD AK IVE+ LP QY IS AEA+S Sbjct: 204 RPRLGLFLFDDMEVSRILLKDIYAKLSSHFDIVEVDLPLLRQYGSKTRRTISLAEAAS-- 261 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL---SSRCYDSHYLRAR 383 KD + Y + + TY L + + Y+ A Sbjct: 262 ------------YHKDWISEYSD------------KYFKDTYTLLLDGMKISATDYIDAL 297 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 + R ++ ++ + F + +D IL+PTT A + +N Y T N+ G Sbjct: 298 RHRRVLIEEYVKVF-KNIDFILSPTTKIVAPRISDVISNPLQFRE-YLIANTELFNVVGA 355 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 P+ISVP + +P GL + G+ +++ L V + I G Sbjct: 356 PSISVPFSTLN-DLPAGLMISGELYKDGDLLEVAEYILNIVG 396 >gi|269125596|ref|YP_003298966.1| amidase [Thermomonospora curvata DSM 43183] gi|268310554|gb|ACY96928.1| Amidase [Thermomonospora curvata DSM 43183] Length = 476 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 134/497 (26%), Positives = 218/497 (43%), Gaps = 52/497 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ + E +RS ++S +EL D Y+ IE N ++ A++ V A +AR A E+ Sbjct: 1 MTRLHDLTALEQAAAIRSGELSPLELTDHYLDRIERLNERVGAFVTVTADRARRQAGEAA 60 Query: 61 KRIINGDAR----DLEGIPIGIKDCFATKGIH----TQACSHILDGFRPHYESTVTQKLW 112 +R+ R L G+ + +KD + +G+ + AC+ ++ + V +L Sbjct: 61 RRVQECAERRLLPPLHGVAVPVKDLSSVRGVRLTRGSAACADLVGSV----DDAVVTRLR 116 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 G V+LGK EF + E++ P +PW S SSGG++AAVA L Sbjct: 117 RAGTVLLGKTATPEFGLPCYTESAVAPPARTPWDPARSAGG-----SSGGAAAAVAAGLA 171 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 + G+D GGSIR PAS G VG+KPT GR SR + L G I RTVRD+A LL Sbjct: 172 PVAHGSDGGGSIRIPASACGLVGLKPTRGRISRGPLAPDLFGLVTDGPIARTVRDAAALL 231 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDK----TWQQ 287 + G + D P+P R LD + I + I + L T+ +++ Sbjct: 232 DVMHGPEPGDLYTAP-PLPPGRRFLDYADIDPGRLRIARTLVPPMLETTVHPDCVTAYEK 290 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + L++ G + E+ P + ++ ++ L D R L L + Sbjct: 291 TSALLEELGHHVEELPPVFGPQLAPDFALLW--SVTAALTPVDPAREHL----LQPLTRW 344 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 R G G +L++ + +RA ++ R D ILTP Sbjct: 345 LRDRGNAVG---------GPELLAAHARLQNAVRA--ALPVLDR---------FDAILTP 384 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFT---VAVNMAGLPAISVPAALCEKKMPLGLQLI 464 T P+G + ++ + FT N++G PA+++P +P+G+ L Sbjct: 385 TLAAPPAPVGYFHDAEPAVNFERQNRFTPFCAVYNLSGQPAVTLPLHWNAAGLPIGVMLA 444 Query: 465 GQPFREETLFSVGQIIE 481 G+ E TL S+ +E Sbjct: 445 GRLGGEGTLISLAAQLE 461 >gi|332995653|gb|AEF05708.1| amidase [Alteromonas sp. SN2] Length = 549 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 137/515 (26%), Positives = 230/515 (44%), Gaps = 71/515 (13%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRIINGD 67 E + + ++S+ LV Y+ IE + +N+ + + ++ARAA R+ G Sbjct: 51 EQAQAIAAGELSSEALVKGYLARIEKLDGDVNSILALNPNAIEEARAADLARKNRMRKGP 110 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ +KD T + T A + L ++ + +L GA++LGK N+ E+ Sbjct: 111 ---LFGIPVLLKDNIETSELPTTAGAMALVDNDTKRDAPIVARLKAAGAIVLGKTNLSEW 167 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAASIGTDTG 181 A S + IS W ++ + + GSS GS AA+A L + ++GT+T Sbjct: 168 ANFRSESS------ISGWSAVGGLTRNPHMLSRSACGSSSGSGAAMALRLASLAVGTETN 221 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+S G VG KPT G SR I+ + + D AG +T V D+ ++ +AG D Sbjct: 222 GSIICPSSMNGIVGFKPTVGLLSRTHIVPISYTQDTAGPMTANVNDAWLMASIMAGVDTK 281 Query: 242 DATCVN-----LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D+ + L P + L ++G+ VG+ + + D +P + T+++ ++ L AG Sbjct: 282 DSATLEASKHMLNAPQ-QSMLATDLKGVRVGVVRYRQGD--NPHVLSTYEKALNSLTAAG 338 Query: 297 AKIVEIS----------------LPHTQYALPAYYIISPAE----ASSNLARYD-GVRYG 335 A++VEIS L Y L Y SPA+ + S L Y+ Sbjct: 339 AELVEISDFKQPESFWADSYQVLLSEFHYTLNEYLEGSPADIPVRSLSELITYNQASSRE 398 Query: 336 LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 L + +DI E NT I + ++ R + I L+ Sbjct: 399 LALFNQDIFEKAVNTDDINSPEYASALALV-----------RETARDKGIDALMA----- 442 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 + VDV++ P+ + AF + + MG I +AG P ++VPA K Sbjct: 443 --QHKVDVLVAPSN-SPAFLIDGVYGDHSPMGFIGIGYLAA---IAGYPHLTVPAGEV-K 495 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIE-KEAGYFRP 489 +P+G+ IG+ + +E + +G I + K Y +P Sbjct: 496 NLPVGISFIGKQWDDEKVLRIGSIFQAKHGAYIKP 530 >gi|291297297|ref|YP_003508695.1| Amidase [Meiothermus ruber DSM 1279] gi|290472256|gb|ADD29675.1| Amidase [Meiothermus ruber DSM 1279] Length = 519 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 127/497 (25%), Positives = 223/497 (44%), Gaps = 65/497 (13%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRIIN 65 ++E + +++ +++ EL Y+ I N Q+ AY+E+ ++ARA +E + + Sbjct: 68 IAELQALMQAGQLTSEELTLFYLWRIRRYNDQLRAYLELNPEALEEARARDQERQQGQVR 127 Query: 66 GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIPI +KD +T+G +HT A + +L ++ + QKL G V+LGK N+ Sbjct: 128 GL---LHGIPIALKDNISTRGPLHTTAGAAVLAQHIADQDAFIVQKLRAAGVVILGKNNL 184 Query: 125 DEFA--MGSSNETSYY---GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A M S + Y G +P+ D GGSS G++ AVA L A IGT+ Sbjct: 185 SEWANFMTSQSVNGYSTLGGHTRNPYGPFDV------GGSSSGTAVAVAANLAVAGIGTE 238 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ PA+ +KPT G SR II + D AG +T+ D A+L+ + GYD Sbjct: 239 TSGSLVYPAAQNSLFTLKPTLGLVSRDRIIPITAAQDTAGPMTKKASDLAVLMSVLTGYD 298 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW----LKDA 295 D P + A + + P R+ ++ + Q+ + L+ Sbjct: 299 PGD--------PQTQVAQGFTFPAVPPSPPAALRVGWVQHIQRRGDQEALEQVAQALQSL 350 Query: 296 GAKIVEISLPHTQY-ALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEM-YENTRS 352 GA++V + P +P + A +LA Y G + G +D++E ++ + Sbjct: 351 GAEVVPVPFPEGSIEMMPVLH----AGMRRDLAHYLKT-TGAAIRGLQDVIEYNRQHPEA 405 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + +GQ++ + + LS Y++ + R+ + +A VDV+L Sbjct: 406 MRYGQDLLEASL--NHPLSDAEYEALVQKNRQQGRERLLELMQAHR--VDVLLA------ 455 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 ++ ++ + +G P ++ PA E P+G L+G+P ++ Sbjct: 456 -----------------ISNSLSLLTSTSGFPVVNFPAGYRESGEPVGASLVGRPLQDPL 498 Query: 473 LFSVGQIIEKEAGYFRP 489 L + Q + G RP Sbjct: 499 LIGLAQAAAERLGIHRP 515 >gi|254283693|ref|ZP_04958661.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR51-B] gi|219679896|gb|EED36245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [gamma proteobacterium NOR51-B] Length = 494 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 121/481 (25%), Positives = 207/481 (43%), Gaps = 39/481 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDK-RIINGDARDLEG 73 L + +SA L+ I N +NA ++ Q A A A E D+ R + L G Sbjct: 38 LNEQRLSAETLMAQSYATINRCNPSINAICTLIDQDAAMAMAREVDQQRALGMPLPPLAG 97 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +PI IKD TKG+ T S + P +S + +L GA+++GK N E GS Sbjct: 98 LPIAIKDLAQTKGLRTTLGSPLFRDNIPDSDSLIVSRLKAAGALVIGKTNTPEMGAGSHT 157 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +G +P+ + D+ G S G ++A G L A G+D GGS+R PA F Sbjct: 158 FNTVFGITRNPY----NLDRSAGGSSGGAAAALRCGMLALAD-GSDMGGSLRNPAGFCNV 212 Query: 194 VGIKPTYGRCSRLG-IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG++P+ GR SF + G + RTV D +LL+ IAG D D ++LP Sbjct: 213 VGLRPSMGRVPTWPQATSFFARMGIEGPMARTVEDCTLLLQHIAGPDPRDP--LSLPQQH 270 Query: 253 YE-RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + L G+ +G + + + + ++ ++ G + EI L A+ Sbjct: 271 FSPDGLASDPSGVKIGFSRNPAGIPVERPVLRIFEDAVADFAQLGCDMEEIKLDQLDGAM 330 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 + + A A + LA D+ + + +K G + + Sbjct: 331 TVFRTLR-AAAYATLA-------------GDLFKQFGEQMKPTLADNIKQ----GLALSA 372 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS--GSMGHI 429 +D+ R+ + L ++ FE +D ++ P + FP+ +E + G Sbjct: 373 DDIFDAETNRSVQFAAL-----SQLFET-LDFLVLPVAQVAPFPVEQEYPTAIEGEAMQD 426 Query: 430 YNDVFTVAVNMA--GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 Y D V ++ GLPA SVPA +P+G+Q++G+P + + + ++ Y+ Sbjct: 427 YIDWMAVCCMISPFGLPAASVPAGFDADGLPMGVQIVGRPGDDMGVLRLAYAFQQRTRYW 486 Query: 488 R 488 + Sbjct: 487 Q 487 >gi|119494367|ref|XP_001264079.1| amidase [Neosartorya fischeri NRRL 181] gi|119412241|gb|EAW22182.1| amidase [Neosartorya fischeri NRRL 181] Length = 456 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 90/305 (29%), Positives = 146/305 (47%), Gaps = 14/305 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + +SE D LR + + E+V +Y+ I NS + A I V + A A + D+ Sbjct: 8 DIQELTISEYHDALRERRTTCTEVVVAYLDRISRYNSLLKALI-TVNENALDVARQRDQE 66 Query: 63 ---IINGDARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 ++ +D L G+P+ +KD ++T + T + L + ++ V KL Sbjct: 67 TEALLQQHGKDHTFPPLHGVPVILKDTYSTLDMPTTSGVKALHSLQTKADAFVVTKLRRA 126 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GA++LGK N+ E ++ +S G +P+ TPGGSSGG++AA+A L Sbjct: 127 GAIILGKANLHELSLEGVTVSSLGGQTRNPYDL-----SRTPGGSSGGTAAALAANLAVV 181 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 G DT S+R PAS +G +PT G+ SR GII + D AG + RTV+D IL Sbjct: 182 GCGGDTMNSLRSPASACSIIGFRPTRGQISRRGIIPVTDTQDVAGPMARTVQDVRILFDV 241 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + G D+ D ++ ER+ + + +G+ K + D P Q + L Sbjct: 242 MKGEDKGDEATIDCQRDAMERSSETCGRRKRIGVLKSFFADDGDPEGSIVNQTVLDALDK 301 Query: 295 AGAKI 299 A A + Sbjct: 302 ARANV 306 >gi|134293890|ref|YP_001117626.1| amidase [Burkholderia vietnamiensis G4] gi|134137047|gb|ABO58161.1| Amidase [Burkholderia vietnamiensis G4] Length = 493 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 129/491 (26%), Positives = 209/491 (42%), Gaps = 40/491 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIIN 65 ++ E +R K +S VE + +Y+ IE N +NA I + + A A E D + Sbjct: 21 LSAGELASAIRRKAVSCVETMRAYLDHIERVNGAVNALISLRDRATLLAEAAEKDAALAR 80 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L G+P KD TKG+ T S I P +S ++ GA+ +GK N Sbjct: 81 GEYHGWLHGMPQAPKDLAMTKGLRTTYGSPIFRDHVPQADSIGVGRMRAAGAIFIGKTNT 140 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF +GS +G +P+ D T GSSGGS+AA+A + + G+D GGS+ Sbjct: 141 PEFGLGSHTFNDVHGATRNPY---DLTRSAG--GSSGGSAAALAARMLPVADGSDFGGSL 195 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+F G++P+ GR R + F L G + RTV D A LL AGYD D Sbjct: 196 RNPAAFCNVYGMRPSQGRVPRWPAVDVFMQQLGTEGPMGRTVGDVAQLLAIQAGYDANDP 255 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVE 301 + + LD ++G + ++ YL+ P + +QG++ L++ G + Sbjct: 256 LSLAEQPLVFATPLDTDLRGRRIAWVGDWD-GYLATEPGVLAQCEQGLATLREIGCDV-- 312 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ALPA+ A + R L G + + R E + Sbjct: 313 ------DAALPAF-------APERIWRLWLAHRHLLAGGGLLAHYRDPARRALLKPEAIY 359 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + + + +D+ R + +++ F D I P+ FP E Sbjct: 360 EVEGLLAMGGAAVFDASVERTAWHQAVLR------FFDRYDFIAAPS--AQVFPFDVELR 411 Query: 422 NSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 ++ D + V +AG P ISVP + +P+G+QLIG+P + + Sbjct: 412 WPQAIAGRQMDTYHRWMETVVPWTLAGCPVISVPVGFNDDGLPMGMQLIGRPRADLAVLQ 471 Query: 476 VGQIIEKEAGY 486 + + E+ A + Sbjct: 472 LARGYEQAADW 482 >gi|311743173|ref|ZP_07716981.1| amidase [Aeromicrobium marinum DSM 15272] gi|311313853|gb|EFQ83762.1| amidase [Aeromicrobium marinum DSM 15272] Length = 450 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 140/497 (28%), Positives = 216/497 (43%), Gaps = 64/497 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + EL + RLR+ D+SA EL + ++ I+ +S++NA +E++ ++A A A +D Sbjct: 3 LHELVAAGPTTQTARLRAGDVSATELARATVERIDAESSRLNAVVELLGEEATAMAAAAD 62 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R G+ L G+PI +K+ G T S ++ + ++ + +L + GAV++ Sbjct: 63 RRRSAGEDGPLLGVPIAVKNDLDVAGHVTGLGSRAMN-RKATTDADLVARLRELGAVVVA 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + E A+ E++ G +P + TPGGSSGGS+A VA + +D Sbjct: 122 STALPELAVYGFTESAATGVTRNPHDT-----GHTPGGSSGGSAALVAAGAVGLATASDG 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GSIR PA+ G VG KPT+G S G I L G +TRTV DSA+ L A+ + Sbjct: 177 AGSIRIPAACCGLVGFKPTHGTVPSSGGWI----GLSTQGGLTRTVADSALYLDAVGTFA 232 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + P+ R G++ R + L P + ++ L AG + Sbjct: 233 TSLTSAAAGGGPEPLRI------GLSTSASAATRAEPLDPEVTGAMRRAADALAAAGHDV 286 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRY--GLR-VEGK--DILEMYENTRSIG 354 E+ +P Y L A + VRY G+R V G D + TRSI Sbjct: 287 REVEIP---YGLDAKALT--------------VRYLAGIREVAGTVDDPALLERRTRSIA 329 Query: 355 -FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G+ G + + C H A T GVDV LTP A Sbjct: 330 RLGRP------FGRGAIDAACRAGHRWGATVHDT-----------AGVDVFLTPVMSGPA 372 Query: 414 FPLGKEENNSG-----SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P+G + SM Y +T N AG PA+S+PA +PL +QLI + Sbjct: 373 LPVGHFDGRGALRTVLSMNAFYP--YTAQWNHAGTPAVSLPAGTSRSGLPLAVQLIARRG 430 Query: 469 REETLFSVGQIIEKEAG 485 + L ++ +E G Sbjct: 431 DDADLMALAAQLEAGLG 447 >gi|307730115|ref|YP_003907339.1| Amidase [Burkholderia sp. CCGE1003] gi|307584650|gb|ADN58048.1| Amidase [Burkholderia sp. CCGE1003] Length = 451 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 140/304 (46%), Gaps = 28/304 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNA-YIEVVAQKARAAAEESDKRIINGD 67 + ES L +K +SA EL+D+ + I+ ++ A Y V AR AA SD G Sbjct: 4 IRESGKALATKSLSAGELLDASLATIDADLARGGATYTCVDRLAAREAANASDTLRERGY 63 Query: 68 ARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW-DNGAVMLGKLNMD 125 L G+P+ +KD F KG T A S +L P + GAV +G+ NM Sbjct: 64 VPSALAGLPVSVKDLFDIKGQVTTAGSRVLRDAAPAARDAAAVARLREAGAVFVGRTNMS 123 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA +YG ++P + GGSS G++ +VA A++GTDTGGS+R Sbjct: 124 EFAFSGLGLNPHYGTPLNPAHA-----GRLAGGSSSGAAVSVALGHVVAALGTDTGGSVR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G G KPT R G + + S D G I R+V A+L I+G Sbjct: 179 IPAAFCGLAGFKPTARRVPLDGAVPLSASFDSVGPIARSVDCCALLDSVISG-------- 230 Query: 246 VNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +ALD + + G+ +G+ +Y D L T+ + + I L+ AGA + Sbjct: 231 ---------QALDTAPRPLAGLRLGVTSDYVADDLDETVSTAFNRAIGMLRRAGASVERF 281 Query: 303 SLPH 306 P Sbjct: 282 VFPE 285 >gi|115457168|ref|NP_001052184.1| Os04g0182900 [Oryza sativa Japonica Group] gi|38346899|emb|CAE04394.2| OSJNBb0006L01.6 [Oryza sativa Japonica Group] gi|113563755|dbj|BAF14098.1| Os04g0182900 [Oryza sativa Japonica Group] Length = 507 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 213/502 (42%), Gaps = 90/502 (17%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N+ ++A IEV AA +R L G+P+ +KD Sbjct: 44 LTSTALVRFYLDRIARLNTLLHAVIEVNPDALAQAARADAERATGHRCGPLHGVPVLLKD 103 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK N+ E+A S+ Sbjct: 104 IIATRDRLNTTAGSLSLLGAVARRDAGVVARLRRAGAVVLGKANLPEWANFRSS------ 157 Query: 140 PVISPW--RSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W R S + + P GSS G + A A + A ++GT+T SI PA+ Sbjct: 158 PGLRGWSARGGQSRNPYVLSADPCGSSTGPAIAAAANMAAVTVGTETTASILCPAAANSV 217 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G+I F D G + RTV D+ +L AI GYD DA + Sbjct: 218 VGIKPTVGLTSRSGVIPFTTRQDTVGPLCRTVADAVHVLDAIVGYDALDAKATKAASKYI 277 Query: 249 PVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVE----- 301 P Y + L ++G +GIP + D+ + T+ K ++Q ++ ++ GA ++E Sbjct: 278 PAGGYVQFLRIDGLKGKRIGIPDGF-FDFPNGTVRKMVYKQHLNTMRQQGAVVIENLEIA 336 Query: 302 ---ISLPHTQ----YALPAYYII-----------SPAEASSNLARYDG---VRYGLRVEG 340 + T+ AL A + + SP + + + ++ V L+ G Sbjct: 337 NLSVIFDGTKSGLLTALLAEFKLNLNNYLSDLSYSPVRSLAEIIAFNNAHPVEEELKEHG 396 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + IL M ENT IG ++ R + + L + L+ + Sbjct: 397 QSILLMSENTAGIGPAEKAAIRRL-------------NELSVNGVEKLMN-------DHQ 436 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 +D I+TP + + V + GLP + VPA EK +P G Sbjct: 437 LDAIVTPDSAAA-----------------------VVLAFHGLPGVVVPAGYDEKGVPFG 473 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + G E L + E+ Sbjct: 474 VCFGGLKGYEPRLIEMAYAFEQ 495 >gi|218194423|gb|EEC76850.1| hypothetical protein OsI_15015 [Oryza sativa Indica Group] Length = 521 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 127/451 (28%), Positives = 200/451 (44%), Gaps = 66/451 (14%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA- 128 L G+P+ +KD AT+ ++T A S L G ++ V ++L GAV+LGK N+DE+A Sbjct: 105 LHGVPVLLKDSIATRDRLNTTAGSLALLGSVVRRDAGVVRRLRRAGAVVLGKANLDEWAN 164 Query: 129 ----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 G+ ++ G +P+ P GSS GS+ A A + A ++GT+T GSI Sbjct: 165 FRTIQGTGGWSARGGQSRNPY-----VLSAAPCGSSTGSAIAAAANMAAVTLGTETDGSI 219 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P+S VGIKPT G SR G++ +P D G I RTV D+ +L AI GYD DA Sbjct: 220 LCPSSLNSVVGIKPTVGLTSRAGVVPISPRQDTIGPICRTVTDAVHVLDAIVGYDSRDAK 279 Query: 245 CVN-----LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGA 297 +P Y + L ++G +GIP + ++ + T+ + +QQ + ++ GA Sbjct: 280 ATRAASKYIPPGGYRQFLKPDGLKGKRIGIPNGF-FNFPNGTVQQIVYQQLLDTVRKQGA 338 Query: 298 KIVE----ISLPHTQYAL-PAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTR 351 ++E +L Q L I+ AE S+L Y + Y DI+ + N Sbjct: 339 VVIENLDIANLAVIQDVLNNGEQIVLAAEFKSSLNTYLSDLSYSPVRSLADIIA-FNNAH 397 Query: 352 SI-----GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL--IKRDFTEAFEQG--VD 402 I FGQ + ++++ L IR L + D E Q +D Sbjct: 398 PIEERLKNFGQLI--------FLVAENTTGIGALEGAVIRQLNELSADGLEKLMQDEQLD 449 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 I+TP ND+ + + + G+PAI+VPA + +P G+ Sbjct: 450 AIITP-----------------------NDLVSTVLAIGGMPAITVPAGYGKMGVPFGIC 486 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 G E L + E+ + K+ Sbjct: 487 FGGLKGYEPRLIEMAYAFEQATKVRKAPKFL 517 >gi|116317815|emb|CAH65851.1| OSIGBa0140C02.3 [Oryza sativa Indica Group] Length = 508 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 213/502 (42%), Gaps = 90/502 (17%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N+ ++A IEV AA +R L G+P+ +KD Sbjct: 45 LTSTALVRFYLDRIARLNTLLHAVIEVNPDALAQAARADAERATGHRCGPLHGVPVLLKD 104 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK N+ E+A S+ Sbjct: 105 IIATRDRLNTTAGSLSLLGAVARRDAGVVARLRRAGAVVLGKANLPEWANFRSS------ 158 Query: 140 PVISPW--RSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W R S + + P GSS G + A A + A ++GT+T SI PA+ Sbjct: 159 PGLRGWSARGGQSRNPYVLSADPCGSSTGPAIAAAANMAAVTVGTETTASILCPAAANSV 218 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G+I F D G + RTV D+ +L AI GYD DA + Sbjct: 219 VGIKPTVGLTSRSGVIPFTTRQDTVGPLCRTVADAVHVLDAIVGYDALDAKATKAASKYI 278 Query: 249 PVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVE----- 301 P Y + L ++G +GIP + D+ + T+ K ++Q ++ ++ GA ++E Sbjct: 279 PAGGYVQFLRIDGLKGKRIGIPDGF-FDFPNGTVRKMVYKQHLNTMRQQGAVVIENLEIA 337 Query: 302 ---ISLPHTQ----YALPAYYII-----------SPAEASSNLARYDG---VRYGLRVEG 340 + T+ AL A + + SP + + + ++ V L+ G Sbjct: 338 NLSVIFDGTKSGLLTALLAEFKLNLNNYLSDLSYSPVRSLAEIIAFNNAHPVEEELKEHG 397 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + IL M ENT IG ++ R + + L + L+ + Sbjct: 398 QSILLMSENTAGIGPAEKAAIRRL-------------NELSVNGVEKLMN-------DHQ 437 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 +D I+TP + + V + GLP + VPA EK +P G Sbjct: 438 LDAIVTPDSAAA-----------------------VVLAFHGLPGVVVPAGYDEKGVPFG 474 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + G E L + E+ Sbjct: 475 VCFGGLKGYEPRLIEMAYAFEQ 496 >gi|91788558|ref|YP_549510.1| amidase [Polaromonas sp. JS666] gi|91697783|gb|ABE44612.1| Amidase [Polaromonas sp. JS666] Length = 457 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 118/422 (27%), Positives = 180/422 (42%), Gaps = 47/422 (11%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLN 123 N A L GIP+ IKD F G T A S +L RP E +L GAV+ G+ N Sbjct: 71 NDPALPLAGIPVSIKDLFDVAGQTTAAGSTVLANARPAAEDCPAVARLRAAGAVIAGRTN 130 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M EFA +YG ++P D+ + PGGSS G++ +VA +G+DTGGS Sbjct: 131 MVEFAFSGVGINPHYGTPVNP---ADTATERIPGGSSSGAAVSVATGAAMVGLGSDTGGS 187 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA+ G VG K T G + + SLD +TR+V D AI ++ A Sbjct: 188 IRIPAALCGIVGFKSTARLVPTSGAVPLSTSLDTVCALTRSVSD------AITVHEVLAA 241 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 V L + + + + + D L T+ +++ + L+ AGA+I EI+ Sbjct: 242 RTVTL--------AGKPLSACRLAVARTQMQDGLDSTVASAFERSLRVLRQAGARIEEIA 293 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 L LPA A+ + A + + + E + V RI Sbjct: 294 LEEINE-LPAINATGGLSAAESYAWHRTLIAAHQAE---------------YDPRVALRI 337 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + ++ D + AR R I R EA G D +L+PT P A + ++ Sbjct: 338 LRGAQMSAADYID--LVAAR--RQWIVR--MEARLGGFDAVLSPTVPLVAPAIASALHDD 391 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQI 479 + + T VNM AIS+P C ++P+GL L ++ + + Sbjct: 392 EEFFRVNGLLLRNTAVVNMLDGCAISLP---CHTPGQLPVGLMLWHAALHDDPVLDLALQ 448 Query: 480 IE 481 +E Sbjct: 449 VE 450 >gi|312200791|ref|YP_004020852.1| Amidase [Frankia sp. EuI1c] gi|311232127|gb|ADP84982.1| Amidase [Frankia sp. EuI1c] Length = 474 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 141/487 (28%), Positives = 228/487 (46%), Gaps = 35/487 (7%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 + + + + L +S+ ELV + + I+ + S +NA+ + + A A A+ +D+RI Sbjct: 4 DLLGLRDQATALAGGAVSSRELVGAALDRIQATQSTLNAFRRLRPEAALAEADAADRRIG 63 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLN 123 G+ L G+PI IKD G T + F P +S + +KL GAV++GK N Sbjct: 64 AGERLPLLGVPIAIKDDTDLAGEPTAFGAR--GEFPPQPADSEMVRKLKAAGAVIVGKTN 121 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF E +G +PW +D TPGGSSGG++AAVA L AA++G+D GS Sbjct: 122 TPEFGQWPFTEGPAFGVTRNPW-DLD----HTPGGSSGGAAAAVAAGLVAAAVGSDGAGS 176 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA++T VGIKP GR S + L G + TV D+A+LL ++G D Sbjct: 177 VRIPAAWTNLVGIKPQRGRISSAPVSEQFNGLTTFGPLALTVGDAALLLDVLSGSAPVDR 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P +E A + + + +G+ + +S T+D ++ + + GA + E+ Sbjct: 237 DRPPAPEEPFEAAAAREPRRLRIGLSLKVPYSGMSATLDPAVREAV---EKVGAALGELG 293 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 A PAY ++ +L D + RV ++L + R++ + + Sbjct: 294 H-DVVPADPAYGLLGVIFLPRSLEAIDD--WAHRVPDPELL----DGRTVANARTGR--- 343 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEE 420 M+ +L++R + R I R F + VDV+L PTT P L + Sbjct: 344 MLRPLLLAARAAEPMS------RWRIGRVF-----RSVDVLLAPTTAVPPPRVGELNRPT 392 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 N + FT N+ G PA++VPA L +PLG QL+G E L S+ + Sbjct: 393 NWETDHAIVAACPFTWPWNVLGWPAVNVPAGLTATGLPLGAQLMGPANSESLLISLAAQL 452 Query: 481 EKEAGYF 487 E+ ++ Sbjct: 453 ERSQRWY 459 >gi|330808047|ref|YP_004352509.1| allophanate hydrolase (urea-1-carboxylate amidohydrolase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376155|gb|AEA67505.1| allophanate hydrolase (urea-1-carboxylate amidohydrolase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 592 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 127/495 (25%), Positives = 211/495 (42%), Gaps = 68/495 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + + + R+ RS ++ +L+ + N + +I ++ AEE + + Sbjct: 5 LRLDDLRNTYRSGTLTPRQLLLGLREKAAALNPDYHLFIHLLT------AEELEPYLTAL 58 Query: 67 DARDLE-----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++RDLE G+P IKD GI T A + P +T+ ++L GA+ LGK Sbjct: 59 ESRDLESLPLYGVPFAIKDNIDLAGIPTTAACPAF-AYVPPRSATIVEQLLALGAIPLGK 117 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G + S YG R+ D + GGSS GSS AVA + + ++GTDT Sbjct: 118 TNLDQFATGLNGTRSPYGAC----RNSVLPD-YPAGGSSAGSSLAVALGVASFALGTDTA 172 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA+ VG+K T G S G++ +LD T T ++++ LL A D Sbjct: 173 GSGRVPAALNNLVGLKATLGLISTAGVVPACRTLDCVTTFTATAKEASQLLALTARPDPR 232 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD---------YLSPTIDKTWQQGISWL 292 D DY R Q G G+P+ +R + + + + I L Sbjct: 233 D---------DYSRHNPQWNDGAAFGVPRRFRFGVPRQQDLAFFGCQEGPQLFLEAIERL 283 Query: 293 KDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + G + VE+ L P + A Y E RY + E + +L + Sbjct: 284 ERLGGEAVELDLSPFLEAARLLY------EGPWVAERYSVAGPLMEREPEAVLPVIRAVL 337 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-- 409 + K + G +R Y L+A+ R + +D ++TPT Sbjct: 338 A-------KAPTVDGVQTFRAR-YRLQALKAQCDRAM----------DALDCVITPTIGR 379 Query: 410 PTSAFPLGKEENNSGS-MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P + L E S +G+ +T +N+ A++VP+A +P G+ L G+ F Sbjct: 380 PVTLAELASEPVLRNSELGY-----YTNFMNLLDYAAVAVPSAFMANGLPWGVTLFGRAF 434 Query: 469 REETLFSVGQIIEKE 483 ++ L SV ++++ Sbjct: 435 TDQYLLSVADALQRQ 449 >gi|125547391|gb|EAY93213.1| hypothetical protein OsI_15019 [Oryza sativa Indica Group] Length = 508 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 213/502 (42%), Gaps = 90/502 (17%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N+ ++A IEV AA +R L G+P+ +KD Sbjct: 45 LTSTALVRFYLDRIARLNTLLHAVIEVNPDALAQAARADAERATGHRCGPLHGVPVLLKD 104 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK N+ E+A S+ Sbjct: 105 IIATRDRLNTTAGSLSLLGAVARRDAGVVARLRRAGAVVLGKANLPEWANFRSS------ 158 Query: 140 PVISPW--RSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W R S + + P GSS G + A A + A ++GT+T SI PA+ Sbjct: 159 PGLRGWSARGGQSRNPYVLSADPCGSSTGPAIAAAANMAAVTVGTETTASILCPAAANSV 218 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G+I F D G + RTV D+ +L AI GYD DA + Sbjct: 219 VGIKPTVGLTSRSGVIPFTTRQDTVGPLCRTVADAVHVLDAIVGYDALDAKATKAASKYI 278 Query: 249 PVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVE----- 301 P Y + L ++G +GIP + D+ + T+ K ++Q ++ ++ GA ++E Sbjct: 279 PAGGYVQFLRIDGLKGKRIGIPDGF-FDFPNGTVRKMVYKQHLNTMRQQGAVVIENLEIA 337 Query: 302 ---ISLPHTQ----YALPAYYII-----------SPAEASSNLARYDG---VRYGLRVEG 340 + T+ AL A + + SP + + + ++ V L+ G Sbjct: 338 NLSVIFDGTKSGLLTALLAEFKLNLNNYLSDLSYSPVRSLAEIIAFNNAHPVEEELKEHG 397 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + IL M ENT IG ++ R + + L + L+ + Sbjct: 398 QSILLMSENTAGIGPAEKAAIRRL-------------NELSVNGVEKLMN-------DHQ 437 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 +D I+TP + + V + GLP + VPA EK +P G Sbjct: 438 LDAIVTPDSAAA-----------------------VVLAFHGLPGVVVPAGYDEKGVPFG 474 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 + G E L + E+ Sbjct: 475 VCFGGLKGYEPRLIEMAYAFEQ 496 >gi|226362703|ref|YP_002780481.1| amidase [Rhodococcus opacus B4] gi|226241188|dbj|BAH51536.1| putative amidase [Rhodococcus opacus B4] Length = 453 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 19/247 (7%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIG 77 +++SA E++ ++ I+ N ++NA + V +A AA++ D RI G D L G+P Sbjct: 23 REVSASEVLADHLAHIKARNPELNALVTVAEDQAIRAADDLDTRISRGEDVGPLAGVPFT 82 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD AT G+ T A S L+ P ++ + GA+++GK N EF Sbjct: 83 VKDLIATAGVRTTAGSRALEHNVPRVDAPAVAAMRAAGAILVGKTNTPEFGASGLTHNDL 142 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G ++P R D + +PGGSSGG +AA+A + +GTD GGS+R PA TG ++ Sbjct: 143 FGYTVNPLRP-DGVPR-SPGGSSGGEAAAIASGMSVVGLGTDFGGSVRWPAHCTGLRSVR 200 Query: 198 PTYGRCSRLGIISFAPSLDQA--------------GIITRTVRDSAILLKAIAG--YDEC 241 PT GR G PS D G + RT++D+A++L+ ++ Y Sbjct: 201 PTIGRVDPDGQYPGVPSGDHVLTNPATMHGTLQTIGPMARTLQDAALVLRVVSSRQYHWT 260 Query: 242 DATCVNL 248 D V+L Sbjct: 261 DPGSVDL 267 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPL 459 DV++ P A PLG E + G + A+++ GLP++ VP + +P+ Sbjct: 373 DVLVLPVASIPAPPLGDELFDVGGQSLTWAQALASCRAISVTGLPSVVVPVGNTQSGLPI 432 Query: 460 GLQLIGQPFREETLFSV 476 G+Q++ +P+ E +V Sbjct: 433 GVQVVARPWCEHVALAV 449 >gi|302753458|ref|XP_002960153.1| hypothetical protein SELMODRAFT_74803 [Selaginella moellendorffii] gi|300171092|gb|EFJ37692.1| hypothetical protein SELMODRAFT_74803 [Selaginella moellendorffii] Length = 557 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L FM + E L+SK +++VELV + + ++ +S + A + + A+ A +DK Sbjct: 115 DLAFMTILELGALLKSKKVTSVELVKVFSERLKRYDSTLKAVVTYTEELAQEQALAADKL 174 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S + E+ V +L + GAV++ K Sbjct: 175 LQQGTYLGPLHGIPYGLKDIIAVPGYRTTWGSTSFKDQFFNEEAFVYTRLKEAGAVLIAK 234 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S G ++A AG + A IG++T Sbjct: 235 LATGSLAY---DDVWFGGRTRNPW----NIEEFSTGSSCGPAAATSAGTIPFA-IGSETA 286 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ TG +PT+G SR I+S + SLD+ G +R++ D I+L + G D Sbjct: 287 GSISYPAARTGVTAFRPTFGMVSRWQIMSLSESLDKIGPFSRSIEDCTIVLDVLRGKDPR 346 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + N+ + D ++ +TVG + ++ + LK+ G K+V Sbjct: 347 DLSSKNIKLKD---PFSIDVKKLTVGYLPDAEMEV------------VRILKEQGVKMVP 391 Query: 302 ISLPHT 307 L ++ Sbjct: 392 FDLKYS 397 >gi|163732420|ref|ZP_02139866.1| amidase [Roseobacter litoralis Och 149] gi|161394718|gb|EDQ19041.1| amidase [Roseobacter litoralis Och 149] Length = 500 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 125/504 (24%), Positives = 209/504 (41%), Gaps = 47/504 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S L + ++ D L S +A E+ + ++ ++ N+ NA I + A + Sbjct: 5 LSNLETLTIASIADGLASGAFTAEEVTLACLEQVKACNAHYNAIIFMNDAALDTARDVDR 64 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDN 114 +R + G+PI +KD G T A +L P +S V ++ Sbjct: 65 RRAAGEAMGAMAGVPIVVKDPMDMMGFPTTAGWKLLYSGTGGVDLMPGTDSPVVARMRAA 124 Query: 115 GAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 AV++GK N+ + GS S+ GP ++ + PGGSS G++AAVA +C Sbjct: 125 DAVIIGKTNVPVLSHTGSHANDSWAGPTLN-----VVIEDRVPGGSSAGTAAAVASNMCV 179 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 A + +TGGSI+ PAS G VGIKPT G G++ + + D G I R V D+AI L Sbjct: 180 AGLAEETGGSIQNPASAHGLVGIKPTIGLVPNAGVVPLSANRDVVGPIARNVTDAAICLD 239 Query: 234 AIAGYDECD----ATCVNLPVPDYERALDQ-SIQGMTVGI-PKEYRLDYLSPTIDKTWQQ 287 +AGY D A+ +P Y L + + G +G+ +R L +++ Sbjct: 240 VLAGYSAEDPKTLASVGQIPPEGYAAGLSKDGLAGKRIGLYGSGWRNQPLCEETTALYER 299 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL-------ARYDGVRYGLRVEG 340 S L +AGA ++E T +A + P + N YD +Y R+ Sbjct: 300 AKSELAEAGAVLIEDPFEGTDFA----SLRKPTAPTPNFDGRGLESIAYDVGQYLHRLGP 355 Query: 341 KDILEMY---------ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 L+ + EN G E + + + + ++ Sbjct: 356 NAALKTFAEFADATAAENPFGPGGVLEFMNSLPDFRAAMENPTQPPELPAFIALKAAYLD 415 Query: 392 DFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA 450 F F E +D ++ FP ++E G + +N+AGLPA+++PA Sbjct: 416 IFNRVFDEHELDSLV--------FPQMRKELPGLHSGDTIQETTVGELNIAGLPAVTLPA 467 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 P L +G+ + E++L Sbjct: 468 GFYATGAPFELIFLGKLWSEKSLI 491 >gi|319761027|ref|YP_004124964.1| amidase [Alicycliphilus denitrificans BC] gi|330822885|ref|YP_004386188.1| amidase [Alicycliphilus denitrificans K601] gi|317115588|gb|ADU98076.1| Amidase [Alicycliphilus denitrificans BC] gi|329308257|gb|AEB82672.1| Amidase [Alicycliphilus denitrificans K601] Length = 474 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 123/502 (24%), Positives = 223/502 (44%), Gaps = 67/502 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +E +R + IS VE + + + ++N +I V A +A A A ++ Sbjct: 4 ELWKWPAAELARAIRGRHISPVEATTAILAHMAAQQPRLNCFITVCADQALAQARAAEGA 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ++ GDA L G+P +KD T+ + T + L G P ++ +L GA+++GK Sbjct: 64 LMRGDALGALHGVPFSVKDIVNTRDVATTFGALPLRGNVPAEDAVSVARLRRAGAILIGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EF + +G + W + + T GGSSGG++ AVA + +I TD G Sbjct: 124 TTTPEFGSKGFTDAPLFGATPNAW-----SPRHTCGGSSGGAAVAVAAGMAPLAIATDGG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT------RTVRDSAILLKAI 235 GS R PA+ G VGIK T +G++ + +LD G T RTV D+A++L A+ Sbjct: 179 GSTRIPAACNGVVGIKQT------IGVVPHSQALDLFGNQTYVTPTARTVLDTALMLDAM 232 Query: 236 AGYDECDATCVNLPVPDYERALD--QSIQGMTVGIPKEYRLDY------LSPTIDKTWQQ 287 AG CD D+ +A+ + ++G K +R + +S +++ ++Q Sbjct: 233 AGPHPCDPWSQGRAAVDHVQAVRAARDLRG------KRFRYNVAPHGRRVSAQVEQAFRQ 286 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + ++ G + A I P + N + R +++ + Sbjct: 287 ALLHIESLGGSVEPFE---------AQLDIEPLWRTVNHTVW-------RARFAPLVQQH 330 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 + S F ++++ S+ Y ++ + R+R T+ + + D ++ Sbjct: 331 GDALSATFRRQIE-----SAQDYSALDYQNAMFARSRLFHTV------QGWLDDADFLVM 379 Query: 407 PTTPTSAFPLGKE-----ENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPL 459 PT +A PLG + E + MG I + + T+ NM G PA+S+P +++P+ Sbjct: 380 PTLTRTALPLGTDIFDRMEIDGAEMGDIRANWYPWTMPFNMTGHPAVSIPCGFDSERLPV 439 Query: 460 GLQLIGQPFREETLFSVGQIIE 481 GLQ++ F + + +E Sbjct: 440 GLQIVAPMFCDAQMLQAAACLE 461 >gi|159045959|ref|YP_001534753.1| amidase [Dinoroseobacter shibae DFL 12] gi|157913719|gb|ABV95152.1| amidase [Dinoroseobacter shibae DFL 12] Length = 441 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 131/477 (27%), Positives = 212/477 (44%), Gaps = 55/477 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L +++ + LR+ +++A+ L+D+++ I + + A+ + +ARA A D Sbjct: 5 SDLPDLSLQQMSAALRTGEVTALALLDAHLDRIAARDPSVKAWAWLDPDQARAQAIALDA 64 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G A L GIP+G+KD T + T+ + G +P ++ +T +L GAV++G Sbjct: 65 AQAEGKALGPLHGIPVGLKDVIDTADMPTENGTPPDAGRQPDQDAWITARLRAVGAVIVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K E A + ET ++P TPGGSS GS+A+VA + ++GT T Sbjct: 125 KTTTTELAFLNPTET------LNP-----HNPNHTPGGSSAGSAASVAAGMVPLAVGTQT 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+ +PA+F G VG+KPT+G R G+ + +LD G+ TR D+A L + D Sbjct: 174 GGSVIRPAAFCGVVGVKPTFGAIPRQGVTMQSHTLDTLGVFTRDAEDAAFALTCM--MDT 231 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D+ LP D A+ + + G + D S ++ L GA + Sbjct: 232 EDSDPATLPPQDAHPAIAGATRPPVFGFVRPPEWDRASAETKAALEKLAQAL---GA--I 286 Query: 301 EISLPHT-QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 +SLP + + I+ AE + + +RY R G D L TR Sbjct: 287 PLSLPESFEQVADLRARINFAEMAWHYSRY-------RTAGWDALSAA--TRDAMEAGAA 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + YL A R + F Q VD +L P+ LG Sbjct: 338 CAAV--------------DYLAALMQREPLYASLDPLFSQ-VDCLLCPSA------LGAA 376 Query: 420 ENNSGSMGH-IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 S G I+N ++T G P +++P EK +P+G+QL+G+ + L S Sbjct: 377 PEGLSSTGDAIFNGLWT----FMGTPCVTLPLPETEKGLPIGVQLVGRRGEDRALLS 429 >gi|254477413|ref|ZP_05090799.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ruegeria sp. R11] gi|214031656|gb|EEB72491.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ruegeria sp. R11] Length = 470 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 127/491 (25%), Positives = 219/491 (44%), Gaps = 60/491 (12%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA----AAEESD 60 +F + + L ++ ++A EL++ + I+ N +NA +VA++ A AE +D Sbjct: 4 HFQSARQVLRDLATRKLTAAELMEHTLARIDALNPDINA---IVARRDGAELMKEAETAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G L G+PI IKD G+ T S +L F P + +L GA+++G Sbjct: 61 HARTRG---PLHGLPIAIKDLANVAGLTTTQGSPMLRDFVPAEDELFVARLRAAGAIIVG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF +GS +G +P+ + S SSGG++AA+A + + + G+D Sbjct: 118 KTNTPEFGLGSHTFNPVHGATANPYDTTRSCGG-----SSGGAAAALATGMLSLADGSDM 172 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GS+R PA + G +PT+GR S+ F L G + R+ D AILL ++G D Sbjct: 173 MGSLRNPAGWCNVYGFRPTWGRVPSQPRGDLFLHPLATIGPMARSPEDLAILLDVMSGAD 232 Query: 240 ---ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDA 295 ATC D A + Q M +G ++ Y + P I +T + + L D Sbjct: 233 PRQPLSATCWA----DSPTAPLPTAQPMRIGWLGDWGGAYPMEPGILETTRASLDVLADL 288 Query: 296 GAKIVEISLPH-TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G +I E+ P A+ + +++L + G R L+ + +E R + Sbjct: 289 GHRIEEVQPPFPADRIWQAWSTLRSYALAASLRIFAGQRGQLKASAQ-----WELDRGLA 343 Query: 355 F-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GQEV+ A +R+ +R FE+ D ++ PT Sbjct: 344 LTGQEVQS--------------------ASDLRSDWQRSAARLFER-YDALILPT--AQC 380 Query: 414 FPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +P + + + + D + V V++ GLP+++VPA ++ +P+G+Q+ G Sbjct: 381 WPFDIKMGHPTRINEVAMDTYHRWMEVVVPVSLLGLPSVAVPAGFGDEGLPIGVQMFGAH 440 Query: 468 FREETLFSVGQ 478 R+ L ++ Q Sbjct: 441 GRDRALLALAQ 451 >gi|21229770|ref|NP_635687.1| amidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766646|ref|YP_241408.1| amidase [Xanthomonas campestris pv. campestris str. 8004] gi|21111262|gb|AAM39611.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571978|gb|AAY47388.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv. campestris str. 8004] Length = 486 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 129/481 (26%), Positives = 217/481 (45%), Gaps = 73/481 (15%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 RS+ A L + I +N ++A ++ +A A A + G D L G+P Sbjct: 53 RSQPAQAARLATQTLGRINQANDGLHAITRLLPARAAADAARVQAALAGGSDGGALAGVP 112 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T A + + P ++ V Q+L D GAV++G NMDEFA G + Sbjct: 113 FVVKDLFDVAGQVTTAGAALRAQSAPATRDAAVVQRLSDAGAVLVGTANMDEFAYGFATV 172 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P + GGSSGGS+AAVA ++G+DT GSIR PA+ G Sbjct: 173 NAHYGTTANP-----HDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCGVY 227 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PT+G G+ F +LD G +V D + + + G+ PVP Sbjct: 228 GLRPTHGTLPLQGVFPFVDALDVVGPFATSVADLRRVYEVMHGH----------PVPACS 277 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 ++++ +G + +D + G+ L A + LP + A A Sbjct: 278 V---ETLRIAQLG-------GWFQRNLDPELEAGLGTLLTAIGSTTIMELPDAERARAAA 327 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 ++++ AE G R+ ++ L +T++ F + R++ G + +S Sbjct: 328 FVLTAAEG--------GHRH------RNAL----STQAAQFDPATRDRLLAGLQLPASAV 369 Query: 375 YD----SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE--------NN 422 D +H+ AR +RTL R VDV++ P TP A + +E + Sbjct: 370 ADAQQFAHWF-ARAMRTLWDR---------VDVLIAPATPGVAPRIDQESIIIDGLPVSA 419 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++G +FT + +A P ++ P ++PLG+QLI P RE+ LF++ +E+ Sbjct: 420 RANLG-----IFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFALAAQLER 473 Query: 483 E 483 + Sbjct: 474 D 474 >gi|258654977|ref|YP_003204133.1| amidase [Nakamurella multipartita DSM 44233] gi|258558202|gb|ACV81144.1| Amidase [Nakamurella multipartita DSM 44233] Length = 473 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 137/501 (27%), Positives = 213/501 (42%), Gaps = 50/501 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+++ LRS+ +SA EL+ +++ IE N +NA I + + A A A E D+ Sbjct: 7 DLHYLDARAQLALLRSRQVSARELLAAHLARIEAVNPAINAIITLTPESAFARAHELDQG 66 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G A L G+P+ KD T GI T S + P + V ++L G V +GK Sbjct: 67 AARGRFAGPLHGLPMAHKDNHLTAGIRTTFGSRLRADLIPDTDDLVIERLRAAGVVTIGK 126 Query: 122 LNMDEFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 N+ EFA G +G +P+ RS+ T GGSSGG++AA+A L + G D Sbjct: 127 TNIPEFAAGGHTFNEVFGTTRNPYDRSV------TAGGSSGGAAAALAAGLHPLADGNDM 180 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA + VG++P+ GR L +G + RTV D A LL +AG D Sbjct: 181 GGSLRLPAGYCNVVGLRPSAGRVPVHPAADGYSGLSVSGPMARTVDDLARLLSVLAGPDR 240 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAK 298 + P + + ++ + G + + ++ +P D + + + GA+ Sbjct: 241 RSPISLEEPGSAFAQVPERGLVGARIAFSPDLGGQVPVEAPVADMV-RAAAAVCETHGAR 299 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNL-ARYDGVRYGLRVEGKDILEMYENTRSIG--- 354 VE + P A + ++ + + L A D G + +L RS+ Sbjct: 300 -VEPACPDFSGADECFRVLRAWQFEATLGAELDA---GADLVRPSLLANMRQGRSLTGPQ 355 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G+ HR VL R R+F E F D +L P P AF Sbjct: 356 IGRAAVHRT-----VLFHRM----------------REFLEEF----DALLLPVAPLPAF 390 Query: 415 PLGKEENNSGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P + G D + + G PAISVP P+GLQ++G+ Sbjct: 391 P-ADVQYPEVVAGQPQPDYLGWMRPVCHITVTGHPAISVPGGFSPTGTPMGLQIVGRHRG 449 Query: 470 EETLFSVGQIIEKEAGYFRPH 490 E L ++ + E G+ R H Sbjct: 450 ERALLAIARGFETVTGHGRRH 470 >gi|320582853|gb|EFW97070.1| Urea amidolyase [Pichia angusta DL-1] Length = 1830 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 110/414 (26%), Positives = 177/414 (42%), Gaps = 47/414 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD KG T A + P ++T+ L D GA+++GK N+D+FA G Sbjct: 71 LYGVPVAVKDNIDVKGFATTAACPSFS-YEPEQDATIVSLLKDQGAIIVGKTNLDQFATG 129 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG + + D++ GGSS GS+ VA + S+GTDT GS R PA+ Sbjct: 130 LVGTRSPYGITKNAF-----NDRYVSGGSSAGSAVVVARGMVPISLGTDTAGSGRVPAAL 184 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G+KPT G S G++ SLD + + D+ + +A D + Sbjct: 185 NNLIGLKPTKGVFSTAGVVPACRSLDCPSVFATNLADAQLCFDIMAKADFSNC------- 237 Query: 251 PDYERALDQSIQGM-----TVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +Y R L + + V +P ++ L Y K + + + K GA+IV Sbjct: 238 -EYSRVLPANPRRHYPAKPKVAVPIDFTGLWYGDSENPKIYNKAVETFKQMGAEIVPCDF 296 Query: 305 -PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-NTRSIGFGQEVKHR 362 P A Y E R+ + E +E N V Sbjct: 297 TPLLDLAKCLY------EGPWVAERWAATK-----------EFFESNPPEKDLDPTVAKI 339 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I G ++ + Y R + ++KR E+F +G+DV+L PT P + P +E Sbjct: 340 IRGGKAPDAATAFSYEYKR----QGILKR-VHESF-KGIDVMLVPTCPLN--PTIEEVQK 391 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + +T VN+A L A+++P +P G+ L+GQ F + L + Sbjct: 392 EPILVNSRQGTWTNFVNLADLSALAIPVGFRADGLPNGVTLLGQAFEDYALLDL 445 >gi|184201597|ref|YP_001855804.1| amidase [Kocuria rhizophila DC2201] gi|183581827|dbj|BAG30298.1| amidase [Kocuria rhizophila DC2201] Length = 518 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 133/522 (25%), Positives = 217/522 (41%), Gaps = 92/522 (17%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 +F ++E+ LR + ++ L + I+ N + A++ V A +A +D+R+ Sbjct: 3 HFPTLTETVAALRGGETTSESLTSDALDRIDALNEHLGAFVHVARDAALESARAADQRLR 62 Query: 65 NG----------------------DARDLEGIPIGIKDCFATKGIHTQACSHILDGF--- 99 G A L G+P+ +KD G+ T S G Sbjct: 63 CGGLLEDSPAPASERSGGTTREHAKAAALRGVPLSLKDGHDVAGMPTSWGSLTTRGADGS 122 Query: 100 --RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPG 157 R + L D+GAV+LGK + EF + +E Y P +P+ S G Sbjct: 123 IPRAQRSDELAATLQDSGAVLLGKTQVPEFLLNCYSENRLYPPARNPFDLHCSA-----G 177 Query: 158 GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ 217 GSSGG +AAVA + A+IG+D GGS+R PA+ G +G+KP+ GR +S L Sbjct: 178 GSSGGQAAAVAAGILPAAIGSDGGGSVRIPAAACGLIGLKPSRGRVPSSDALSNVGQLGV 237 Query: 218 AGIITRTVRDSAILLKAIA---GYDECDATCVNLPVPDYERALDQSIQG--------MTV 266 G ITRT D+A+L+ + G++ D V +P P + R +D+++QG + + Sbjct: 238 NGPITRTAADAALLMDVLCGTPGHERIDRPVVAVPEPSFSRVVDRALQGDAPWGHRPLRI 297 Query: 267 GIPKEYRLD-----YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 G+ D +SP +GI L+ G + + L + PAY E Sbjct: 298 GVSTASPFDATYEITVSPEARAALDEGIRRLESLGHTVEDADLHYD----PAY-----PE 348 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 A S L + L ++G + L G + + R + + V + + LR Sbjct: 349 AFSRL--WTTAMGQLPLDGAEHL-------LTGLARSFRERALSRSAVELADAF--AVLR 397 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG----------KEENNSGSMGHIYN 431 I+ D + + D+ILTP P+G + + Sbjct: 398 G------IEADLIRQYSR-FDMILTPALAMPPRPVGWYHKGFDIADPAGADQDYLRQCQY 450 Query: 432 DVFTVAVNMAGLPAISVPAALCEK-------KMPLGLQLIGQ 466 +T VN+ GLPAI+VP +P+G+QL+G+ Sbjct: 451 TPWTSVVNVIGLPAITVPTTWRTPGSGDYPGPVPMGVQLVGR 492 >gi|310801661|gb|EFQ36554.1| amidase [Glomerella graminicola M1.001] Length = 558 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 155/312 (49%), Gaps = 21/312 (6%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + R L S ++V+LV++Y+ I N+ ++A E+ AA R Sbjct: 39 LDDLRQGLNSGLFTSVDLVNAYVARINEVNNDLHAIAEINPDAVSIAASLDQARTQGEPL 98 Query: 69 RDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ +KD AT ++ A S +L G + +S +L GAV+LGK MD++ Sbjct: 99 GHLHGIPVLLKDNIATNDKMNNTAGSFVLVGAKVGQDSNAADRLRRAGAVILGKTTMDQW 158 Query: 128 AM--GSSNETSYYG----PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 A G+++ + + P+ + + + D P GSS GS A + L AS+GT+T Sbjct: 159 ATFRGTNSSSGWSARGDQPIGAFYPNQD------PSGSSSGSGIASSIGLAWASLGTETL 212 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P + VGIKPT G SR +I D G + RTV+D+A LL AI G D Sbjct: 213 GSITMPCDVSNLVGIKPTLGLVSRHLVIPITEHQDVVGPMARTVKDAAHLLAAITGPDPR 272 Query: 242 DATCVNLP---VPDYERA-LDQSIQGMTVGIPKEYRLDYLSPTIDKT---WQQGISWLKD 294 D +P P+Y A +D +QG +GIP+ D P + + + + L+ Sbjct: 273 DNYTSAIPFTETPNYAAACVDSGLQGKRIGIPRHLFKDAPWPNTNYSISIFDSAVDTLRS 332 Query: 295 AGAKIV-EISLP 305 AGA+I+ +I LP Sbjct: 333 AGAEIIDDIRLP 344 >gi|325094808|gb|EGC48118.1| amidase [Ajellomyces capsulatus H88] Length = 645 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 142/514 (27%), Positives = 222/514 (43%), Gaps = 83/514 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L + S+V+LV++YI+ I N ++ E+ A A D +G R L G+ Sbjct: 146 LSRRCFSSVDLVNAYIKRIAEVNDTLHVVAEL-NPDAVNIARHLDVERRHGKIRGPLHGL 204 Query: 75 PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----M 129 PI IK +HT + S+ L G +STV KL + G ++LG + E+A Sbjct: 205 PIVIKGNIGIADRMHTTSGSYALLGAELSEDSTVVAKLKEAGVIILGMAGLSEWAGFRAS 264 Query: 130 GSSNETSYYG-PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 SSN S YG VI + + P GSS GS A L A++GT+T GSI P+ Sbjct: 265 NSSNGWSAYGGQVIGAYYP-----RQDPAGSSSGSGVASDLGLAFAALGTETSGSIISPS 319 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 VGIKPT G SR +I + LD G + RTV+D+A LL+ IAG D D Sbjct: 320 QQNNIVGIKPTVGLTSRHLVIPISQHLDTVGAMARTVKDAAKLLQIIAGPDSSDNYTSAF 379 Query: 249 P---VPDYERALDQS-IQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEI 302 P VPDY A S ++G +GIP L++LS P + + ++ L D+GA IV Sbjct: 380 PFDCVPDYPAACQHSALKGKRIGIPTNV-LEFLSTDPAVVAPFNTAVTLLADSGAIIVR- 437 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVK 360 Y+ ++ SP + Y + G E+ N +I +++ Sbjct: 438 ---DANYSAYEEFMTSPLPVQ--------ILYADLINGIANYCSELKTNPNNIHNLSDLR 486 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP----- 415 H+++ + RD T ++++ + + + T+P +P Sbjct: 487 -----------------HFVQTFPLEDYPDRD-TRSWDEALRIGVNNTSP-EFWPIYQKL 527 Query: 416 ---------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA--------------- 451 LG N+ + ++V +A MAG P ++VP + Sbjct: 528 LQMVGEGGVLGALRRNNLDAIVLPSNVSPLASGMAGTPMVTVPMSVWPVDTKVVTSPRDL 587 Query: 452 -LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 L MP+GL +G + EE L + E+++ Sbjct: 588 VLSAPGMPMGLSFMGDLWSEEALIGMAYAYEQKS 621 >gi|33598824|ref|NP_886467.1| amidase [Bordetella parapertussis 12822] gi|33574954|emb|CAE39618.1| amidase [Bordetella parapertussis] Length = 421 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 128/468 (27%), Positives = 212/468 (45%), Gaps = 70/468 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 LN ++ SE+ L +D++A +L + + IE ++ A+ + AAA E D+ Sbjct: 7 LNRISASEAARLLNRRDLTAEQLARACLARIEQREPEVQAWTALRPDAVLAAARELDRGP 66 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 I G L G+P+G+KD F T + T S I +P ++ D GA++LGK Sbjct: 67 IRGV---LHGLPLGVKDMFDTADLPTAYGSGIYQSHQPRADAAAVALCRDAGALVLGKTA 123 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA T + GP +P +TPGGSS GS+AAVAG + ++GT T GS Sbjct: 124 TTEFA------TYHPGPTRNP-----RNTAYTPGGSSSGSAAAVAGDMVPLALGTQTAGS 172 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 + +PA++ G VG KP++GR SR G+ S A +LD G+ R+V D A+L + DA Sbjct: 173 VIRPAAYCGVVGYKPSFGRISRAGLKSLAETLDTVGMFARSVDDVALLASVLMR----DA 228 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 L R V + + + + P +++ L AGA + E++ Sbjct: 229 RLRELRYDGTPR----------VAMFRSPQWRHTLPETRAAFERAARALSQAGAVVEELA 278 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P + + EA+ LA ++ + Y ++ K + M E Sbjct: 279 --------PLHSDVMAYEAAQALA-FERIHYPSQLSTK-LAAMLE--------------- 313 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 L++ Y +H +A + R + + Q DV+L P+ T P + Sbjct: 314 --AGAALTAEQYLAHLAQAGQARAKVAE-----WLQRYDVLLAPSA-TGEAPFYDQGTG- 364 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +F A + G+P + +P A + +P+GLQ++G FR++ Sbjct: 365 -------DPLFCRAWTLFGVPCVHLPFAQGPQGLPVGLQVVGG-FRDD 404 >gi|167579197|ref|ZP_02372071.1| amidase [Burkholderia thailandensis TXDOH] Length = 521 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 146/490 (29%), Positives = 229/490 (46%), Gaps = 60/490 (12%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I I+ ++NA IE+ A A A+ D G AR L G+ + +KD AT + Sbjct: 53 IARIDRDGPRLNAIIEL-NPDAEAIAQALDAEQAAGAARGPLHGVTVALKDNIATGDRMS 111 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 112 TTAGSLALDGVRATRDAQLVAQLRRAGAVIVAKTNLSEWANFRSTRSTSGWSARGGLSRN 171 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+ AVA L A ++GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 172 PYALDRTT-SGSSSGSAVAVAAGLVAMAVGTETDGSIVSPAALNGCVGLKPTVGRVSRDG 230 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIA-GYDECDATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTV D+A LL A+A G A DY ALD +++G Sbjct: 231 IVPLSHTQDTAGPIARTVLDAARLLGALAGGDANDPAAASAPAPADYVAALDANALRGAR 290 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ ++ GA +++ + LP Y Sbjct: 291 IGIARAYFTGH--DEVDAQIERAIAQMQRLGAIVIDPVDLPKPDYEDDEKTVLLHEFKHG 348 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG---FGQEVKHRIMIG 366 LP + +P S LA D++ + R+ FGQE+ ++ Sbjct: 349 LPQWLRAFAPHARVSTLA--------------DVIAFNDAQRAREMPYFGQEL---LLAA 391 Query: 367 TYV--LSSRCYDSHYLR-ARKIRTL-IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 L + Y R R+ R + R EQ +D ++ PT T A+ + + Sbjct: 392 QEAGGLDAAAYREALARCGRRARDEGLARVLR---EQRLDALVAPTEGT-AWLIDLINGD 447 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 SG G F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G E+ Sbjct: 448 SGGEG------FSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAFEQ 500 Query: 483 EAGYFRPHKW 492 + R ++ Sbjct: 501 ATQWRREPRF 510 >gi|229196165|ref|ZP_04322915.1| Amidase [Bacillus cereus m1293] gi|228587323|gb|EEK45391.1| Amidase [Bacillus cereus m1293] Length = 536 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 136/510 (26%), Positives = 224/510 (43%), Gaps = 74/510 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +NA E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNAVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWVADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + YD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRSGIIPLAETLDTAGPMARTVKDAATLFNIMVSYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + DY + L ++G VG+ + +D + Q+ L+DA Sbjct: 308 EKDAMTEKMKDKERMDYTKDLSIDGLKGKKVGVL--FSIDRQDDNRKEVAQKIRKDLQDA 365 Query: 296 GAKIV-EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---- 350 GA + +I L AE NL + Y + D L +N Sbjct: 366 GAIVTDDIQL--------------NAEGVDNLQT---LEYEFKHNVNDFLSKQKNVPVKS 408 Query: 351 --RSIGFG-QEVKHRIMIGTYVL--SSRCYDSHYLRARKIRTLIKRDFTE----AFEQGV 401 I F ++ RI G ++ S + + + ++T K E E+G+ Sbjct: 409 LEEIIAFNKKDSNRRIKYGQTLIEGSEKSATTKDEFEKVVQTSQKNARKELDRYLVEKGL 468 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 D ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 469 DALVM----------------------INNDEVLLSA-VAGYPELAVPAGYDKNGEPIGV 505 Query: 462 QLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +G+ F E+ LF++G E+++ +P K Sbjct: 506 VFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|260219888|emb|CBA26870.1| hypothetical protein Csp_G38800 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 499 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 121/496 (24%), Positives = 221/496 (44%), Gaps = 43/496 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE--ESD 60 ELN+++ +++ R R +S VEL++++I IE ++N + KA +A E+ Sbjct: 40 ELNYLSATDALKRFRDGSLSPVELLNAHILRIEELQPELNIMRSMRFDKAMESARRAEAT 99 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R A LEGIP +K+ G T S +L G + + +T +L + G V+ G Sbjct: 100 YRTAPDSAGPLEGIPTVLKNEHNLVGEETDQGSLLLAGMVDEHNAPLTDRLLEAGTVIHG 159 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + ++ EF + + +G +PW FT GGSSGGS+AA+A + + +D Sbjct: 160 RTHVPEFYVAMFTRSLAHGVTRNPWNPY-----FTCGGSSGGSAAALAAGMTTLATASDI 214 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PA++ G VG KP+YGR + + ++ RTV D+ ++ + G Sbjct: 215 GGSGRVPAAYCGVVGFKPSYGRVPEASFFFAMNTYNHNCMMARTVADAVLMFNVMNGPHP 274 Query: 241 CDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 CD ++ P E A+ I+GM + + + ++ + + + L++ GA + Sbjct: 275 CDPASLH---PKIELAVPPGDIRGMRIALSMDLGYFQVADDVRRNTRLAAQSLREQGAIV 331 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E+ L + N+ RY +GL + + +++ G E Sbjct: 332 DEVELAWDR----------------NVQRY--FTHGLG------MPLGRGLKALTQGAED 367 Query: 360 KHRIMIGTYV-LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + + T V L Y+ + + + + DV+L PT + Sbjct: 368 QVSDYVRTAVELLGNITPEEYIESIDGMGKMHNALQDIYAN-YDVLLCPTLARNTM---A 423 Query: 419 EENNSGSMGHIYNDVFTVAVNM-AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 E + + + + T NM + P +SVP+ + +P GLQ++G+ +RE+ + V Sbjct: 424 AEGCAEAHTDLMENYMTYPFNMLSRHPVMSVPSGFGDNGVPTGLQVVGRTYREDDVIKVA 483 Query: 478 QIIEKEAGY--FRPHK 491 +E+ + +RP K Sbjct: 484 HALEQAINWPAWRPSK 499 >gi|332561184|ref|ZP_08415502.1| amidase [Rhodobacter sphaeroides WS8N] gi|332274982|gb|EGJ20298.1| amidase [Rhodobacter sphaeroides WS8N] Length = 477 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 131/497 (26%), Positives = 217/497 (43%), Gaps = 50/497 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L +++ ++ R++ IS VE+V + IE S +NA ++A A S+K Sbjct: 4 TPLAYLSAAQLTALYRARKISPVEVVTDALARIEASGDSLNAVCFTYPEEALEEARASEK 63 Query: 62 RIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R ++G + ++GIP +KD G T S + + V Q+L + GAV+ Sbjct: 64 RYMSGAQKPGMIDGIPAALKDETMMAGKVTTYGSLLYADHVAAKSAPVVQRLVEAGAVIH 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + EF+ + +G +PW FTPGGSSGGS AA+A L + G+D Sbjct: 124 ARTTTPEFSCAPFCHSRQWGVTRNPWNL-----AFTPGGSSGGSGAALAAGLAPLATGSD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS +G VG KP YGR + P + G + RTV D ++ +AG Sbjct: 179 IGGSIRIPASASGVVGFKPPYGRVPSTPPFNLDP-YNHPGPMARTVEDCLLMQNVLAGPH 237 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + P E LD+S ++G + ++ + P + + + GA+ Sbjct: 238 PEDIASLK---PKLELRLDRSGVKGWKIAFSLDFGFMEIDPAVRANTLAALEVFRALGAE 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E++LP + + + A A+ + A + E ++ L Y F +E Sbjct: 295 VTEVALPWS-------WEVYRAAATHHKALFGAWLADYLDEREERLTSYARR----FARE 343 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 L++ D YL +I I F E G D+ L PT A P Sbjct: 344 A----------LATTTRD--YLAGMEIEGRIWSHFGPMME-GFDLFLCPTLALPAVPAEF 390 Query: 416 -------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 + EE +S +G F + ++ P +SVP+ +P G+QL+G+ + Sbjct: 391 DFFDPLIINGEEIDS-YLGWTMAWPFNM---LSRCPVLSVPSGHAPNGVPTGIQLVGRTY 446 Query: 469 REETLFSVGQIIEKEAG 485 ++++F+ G E G Sbjct: 447 EDQSVFTAGLAYETALG 463 >gi|332305904|ref|YP_004433755.1| Amidase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173233|gb|AEE22487.1| Amidase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 448 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 126/456 (27%), Positives = 206/456 (45%), Gaps = 59/456 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ K ISA EL + + I+ N ++NA+++ K A +E+ + +GI Sbjct: 17 IKDKQISAQELAELQYRYIQRVNPKINAFLQTALPKC--APQETRTGSV------FQGIC 68 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 IG+KD KG T A G + ++ V +L GA +GKLNM E A+G++N+ Sbjct: 69 IGVKDNIDVKGFATTAGMATRIGRQAKQDAFVINRLRQTGAQFIGKLNMHEGALGATNQN 128 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++G +P + +TPGGSSGGS+AAVA + S+GTDT GS+R PA++ G G Sbjct: 129 EHFGDCHNPHKH-----GYTPGGSSGGSAAAVASGMVGLSLGTDTMGSVRIPAAYCGIFG 183 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP+ G S G ++ + +D G + R+ +D + + + +DE A ++ D Sbjct: 184 FKPSRGAVSNHGSVTCSRVMDSIGPMARSAKDLTLAISVMKAFDESCAASIDFKAIDCFT 243 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 A D + + +P+ +S + + +S D G + +A Sbjct: 244 ASDNKV----LLVPENLEGLGVSSDVAADFSANLSAFTDLGYTLEYFDFSDYDFAAARRA 299 Query: 316 IISPAEASSNLARYDGVRYGLRVEGK-DIL----EMYENTRSIGFGQEVKHRIMIGTYVL 370 + EA +RVE + D L + E R + E K + I + Sbjct: 300 GLLLCEAD------------MRVEHQEDWLNQPQKFSEYMRGMLSYIERKTPMDI---MQ 344 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHI 429 S R D+ + AR++ F+QG IL PT AF + N + Sbjct: 345 SERVLDNAKIFARQL-----------FKQGC-AILMPTVLQRAFSFAQPVPANQADL--- 389 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 T N AGLPA+S+P L + +P G+Q++G Sbjct: 390 -----TSFANQAGLPAVSLP-MLSDNILPAGMQIVG 419 >gi|311032683|ref|ZP_07710773.1| 6-aminohexanoate-cyclic-dimer hydrolase [Bacillus sp. m3-13] Length = 500 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 141/512 (27%), Positives = 224/512 (43%), Gaps = 86/512 (16%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + ++ K++ +EL++ + IE N Q+NA I + ++ARA E K G Sbjct: 16 ELVKKKEVKPIELLEMAVSEIETQNPQLNAVIHRMYEQARAVTEMDPKG-------QFAG 68 Query: 74 IPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI +KD K S L +R +S +L +G LG+ N+ EF + + Sbjct: 69 VPILLKDIGQEIKSEPKTLGSRALSKYRSKRDSEYVSRLRKSGFQFLGQTNVPEFGLMAI 128 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E YGP +PW+ TPGGSSGGS+AAVA + + D GGSIR PA++ G Sbjct: 129 TEPVAYGPARNPWKLTH-----TPGGSSGGSAAAVASGMVPIAGANDGGGSIRIPAAYCG 183 Query: 193 TVGIKPTYGRC---SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+KPT GR +LG +++ ++TRTVRDSA +L + G ++ A Sbjct: 184 LFGLKPTRGRTPVGPQLGRFWQGAAVEH--VLTRTVRDSAAVLDELKGVEKGAA----FS 237 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDY--LSPTIDKTWQQ-------GISWLKDAGAKIV 300 +PDY R+ ++ + I K+ R+ Y SP + QQ + +L+ G I Sbjct: 238 IPDYNRSY---LEILPQPIEKKLRIAYSTKSPIGTEVDQQCLEAVKKTLKYLELEGHSIE 294 Query: 301 EISLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EI P + Y+ + E S+ +A + + G + D+ IG Sbjct: 295 EIDAPVDGKKVATSYLSLYFGEVSAMIAALEEI-LGRKATLNDVEPATWLLSLIGKSMSA 353 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + +VL+ R +D + E F + D +TP T AFP K Sbjct: 354 QE------FVLNMREWD------------VAAYAMEEFHETYDFYITPAT---AFPPAKI 392 Query: 420 ENNS---------------GS------MGHIYNDV--------FTVAVNMAGLPAISVPA 450 ++ GS MG + V FT N+ G PA+S+P Sbjct: 393 GDHKLKPLESIALQVTGKLGSATLLKKMGIVEQLVQESLKRVPFTQLANLTGQPAMSLPV 452 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + E+ +P+G+Q + +E+ L + IEK Sbjct: 453 HVTEEGLPVGVQFMAGRGKEDLLLQIAGQIEK 484 >gi|224078151|ref|XP_002305495.1| predicted protein [Populus trichocarpa] gi|222848459|gb|EEE86006.1| predicted protein [Populus trichocarpa] Length = 510 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 38/317 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN-- 65 ++S+ + + K +++ +LV+ Y+ I NS + IE+ A +R + Sbjct: 33 SISDLQLAFKQKKLTSRQLVEFYVGEIHGLNSVLKGVIEINPDALYQADRADYERRVRAP 92 Query: 66 GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIPI +KD ATK ++T A S L ++ V KL +GA++LGK ++ Sbjct: 93 GALVGLHGIPILLKDNIATKDKLNTTAGSFALLRSVVPRDAGVVAKLRKSGAIILGKASL 152 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFT---------------PGGSSGGSSAAVAG 169 E+A +RS+++ + F+ P GSS GS+ +VA Sbjct: 153 SEWAA---------------FRSLNAPNGFSARGGQGKNPYVLSDDPCGSSSGSAISVAA 197 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 A S+GT+T GSI P++ VGIKPT G SR G+I +P D G I RTV D+ Sbjct: 198 NFVAVSLGTETDGSILCPSNANSVVGIKPTVGLTSRAGVIPISPRQDTVGPICRTVSDAV 257 Query: 230 ILLKAIAGYDECDATCVN----LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKT 284 I+L AI G D D +P Y++ L ++G +GI + L + S + Sbjct: 258 IVLDAIVGVDYNDGATQEASKYIPHGGYKQFLKPYGLKGKRLGIVRNPFLGFASKAESQA 317 Query: 285 WQQGISWLKDAGAKIVE 301 ++ + L+ G+ IV+ Sbjct: 318 FEYHLQTLRQGGSVIVD 334 >gi|94310865|ref|YP_584075.1| amidase [Cupriavidus metallidurans CH34] gi|93354717|gb|ABF08806.1| amidase [Cupriavidus metallidurans CH34] Length = 440 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 20/242 (8%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+PI IKD F +G T+A S LDG P +S +L GAV++G+ NM E Sbjct: 67 ASPLAGLPISIKDLFDVRGQVTRAGSKALDGGAPAQADSPAVARLRAAGAVLIGRTNMSE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA +YG +P+ + GGS+ G + +VA + A++GTDTGGSIR Sbjct: 127 FAFSGLGLNPHYGTPRTPF-----DPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRI 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P++F G G KPT R G + + SLD AG + R+V + + A+ + D Sbjct: 182 PSAFCGLTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVA-CCVAMDAVLSGETLD---- 236 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 RA D ++G+ + +++ D L P + +T++ ++ L GA IV P Sbjct: 237 -------TRAAD--LRGLRFYVTRDFVCDGLDPEVAQTFEAALARLSAQGATIVPFDFPE 287 Query: 307 TQ 308 + Sbjct: 288 LR 289 >gi|114777973|ref|ZP_01452887.1| amidase [Mariprofundus ferrooxydans PV-1] gi|114551760|gb|EAU54312.1| amidase [Mariprofundus ferrooxydans PV-1] Length = 444 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 125/419 (29%), Positives = 191/419 (45%), Gaps = 47/419 (11%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D+ L GIP IKD GI T A C + P S V Q+L D GA+ +GK N+D Sbjct: 62 DSLPLYGIPFAIKDNIDLAGIPTTAGCPEY--AYIPKNSSLVVQRLLDAGAIPVGKSNLD 119 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 +FA G S +G + SMD T + GGSS GS+ +VA L + S+GTDT GS R Sbjct: 120 QFATGLVGTRSPFG---ATRNSMDPT--YISGGSSSGSAVSVAKGLASFSLGTDTAGSGR 174 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F +GIKPT G S G++ SLD I ++D LLK GYD DA Sbjct: 175 VPAAFNNLIGIKPTKGLLSTSGVVPACRSLDCVSIFALNLKDGETLLKITEGYDAADAYS 234 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISL 304 PV E +D + T G+P+ L++ + + + + + L+ G K V+I Sbjct: 235 RKNPVIS-ETVVDS--ESFTFGVPQASTLEFFGNSHAEALYYRAVEKLEADGGKRVDIDF 291 Query: 305 -PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P + A Y E RY + + ++ TR+I I Sbjct: 292 APFLETARLLY------EGPWVAERYVAIEDFIETHAD---ALWPVTRAI---------I 333 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN- 422 G + + + + Y R ++R + T VD ++TPT T + L + E + Sbjct: 334 EPGRDIGAVDAFKAMY-RLEELRQV-----TAEILAAVDCVVTPTAGT-IYTLAEVEADP 386 Query: 423 ---SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + ++G+ +T +N+ L A++VPA +P G+ L F + L ++G+ Sbjct: 387 IRLNSNLGY-----YTNFMNLLDLSALAVPAGFQPDGLPFGITLFAPAFHDRALLALGR 440 >gi|192290327|ref|YP_001990932.1| Amidase [Rhodopseudomonas palustris TIE-1] gi|192284076|gb|ACF00457.1| Amidase [Rhodopseudomonas palustris TIE-1] Length = 477 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 110/472 (23%), Positives = 198/472 (41%), Gaps = 37/472 (7%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L+S +++ +E++D + I + +NA + +AR A E K+ + L G+ Sbjct: 18 KLKSGEVTPIEVLDVLEERIAEVDGAINALPTLCFDRARTHAAELMKKP-PAERGLLAGL 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD A G+ T S I P + + L NG V+ K N EF G++ Sbjct: 77 PVPIKDLTAVAGVLTTQGSPIYKDNVPARSDLMVEHLEANGGVVYAKSNTPEFGAGANTF 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW S G + + A+ +L + G+D GGS+R PASF G V Sbjct: 137 NEVFGATRNPWDL--SRSAAGSSGGAAAALASGTAWL---AHGSDMGGSLRNPASFCGIV 191 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++P++GR + +L G + R V D A+LL A++G D + P + Sbjct: 192 GLRPSFGRVAHTPAAKIDRNLGVQGPMARNVEDVALLLDAMSGEYAADPLSIPSPATSFL 251 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 A + + V + + + P + ++ +AG IVE + P A Sbjct: 252 AAARSRQKPLRVAYSPDLGITPVDPEVAAVTRKAAERFAEAGV-IVEQAQPDLSEA---- 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 E L +D + D+L + ++ + + L+ Sbjct: 307 -----HECFQALRAFD-----FAISKADLLRTKRDLLKPEVIWNIEQGLKLSVDDLAKAE 356 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV- 433 + AR I F + D++L P T T+ FP+ ++ + GH +++ Sbjct: 357 AQRVAMTARTIE----------FFRTYDLLLCPATITAPFPV-EQRYLAECNGHTFDNYV 405 Query: 434 ----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 A+ + PA+S+P + +P+GLQ++ +P E L + ++E Sbjct: 406 EWLGIVYAITLVCCPALSLPCGITTTGLPVGLQMVARPRNEAGLLAGAAVLE 457 >gi|218531927|ref|YP_002422743.1| allophanate hydrolase [Methylobacterium chloromethanicum CM4] gi|218524230|gb|ACK84815.1| allophanate hydrolase [Methylobacterium chloromethanicum CM4] Length = 611 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 121/427 (28%), Positives = 185/427 (43%), Gaps = 52/427 (12%) Query: 69 RDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+P +KD G+ T AC + P + ++L GA+++GK N+D+F Sbjct: 66 KPLWGVPFAVKDNVDVAGLPTTAACPDF--AYTPQATALAVERLLAAGAILVGKTNLDQF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + Y PV P ++D PGGSS GS+ AVA L ++GTDT GS R P Sbjct: 124 ATGLVGVRTPY-PV--PKNAIDP--AIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KP+ G S G++ +LD + TV ++ + + +AGYD D Sbjct: 179 AGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADTVFRIMAGYDPQDPYSRA 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPVP AL G+ VG+P L + + G A A + HT Sbjct: 239 LPVPPRPGALP---PGLRVGVPDAAGLIFAGDALSAAAFDG------ARADL------HT 283 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + A + +LA + V GL G + E Y+ R GF +E + T Sbjct: 284 --------VTGAAATAVDLAPFFAV-AGLLYAGPWVAERYQAIR--GFIEERPEALHPTT 332 Query: 368 YVL--SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLGK 418 + ++ + + A R R TEA +G+DV++ PT P +A P+G Sbjct: 333 RAIIGAATGHSAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRPRRVADLAADPVGP 392 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +G +T VN+ L A++VP P G+ LI + + +G Sbjct: 393 NSE----LG-----TYTNFVNLLDLCALAVPGRFRTDGFPSGVTLIAPRGADGLIAELGA 443 Query: 479 IIEKEAG 485 + AG Sbjct: 444 RLHAAAG 450 >gi|254475249|ref|ZP_05088635.1| amidase [Ruegeria sp. R11] gi|214029492|gb|EEB70327.1| amidase [Ruegeria sp. R11] Length = 442 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 134/487 (27%), Positives = 212/487 (43%), Gaps = 53/487 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E +E + + +I + L +Y+ AI+ + + V +A A A + Sbjct: 1 MQEWLTQTAAELGRGIEAGEICPLALTQTYLDAIDAHPLRDRIFSAVTHDRAIAEATAAK 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G L +G+PI KD F T G T++ S +L G P ++ V + G V L Sbjct: 61 ARAEQGQRLSLVDGVPISWKDLFDTAGTATESGSDLLAGRIPDTDALVLRAATSLGTVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M E A PV + + D G SSG +++ G L A IG+D Sbjct: 121 GKTHMSELAFSGLG----LNPVKATPPCVHDADAAPGGSSSGAAASVAFG-LAACGIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R P+++ VG+K T GR S G++ D G + R+V D+AI L + G Sbjct: 176 TGGSVRIPSAWNDLVGLKTTSGRLSLEGVVPLCLKFDTIGPLARSVEDAAIYLGVMEGTS 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 PD + SI+GM + D L PTI + ++ L++AGA I Sbjct: 236 G----------PDLRGS---SIKGMRFADLRTIAQDDLEPTIADAYADALTKLRNAGADI 282 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + + +P Q A+ ++ AEA YGL +D++E + E+ Sbjct: 283 IPLEVPALQEAMGLSPVLFTAEA-----------YGLW---RDVIEAAPHL----MFPEI 324 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R G S Y + + + +IR ++ D A G D IL P +P P + Sbjct: 325 LERFRSGK-TFSGPDYVAAWAKLEQIR--MEWDQATA---GFDGILCPASPI--LPPNMQ 376 Query: 420 ENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 ++ +++ T N+ GL +S+P + GLQ++GQP EE L Sbjct: 377 RLQDDHDYYVRSNLMALRNTRIGNLMGLCGLSLPTGVPS----CGLQILGQPDCEEALLR 432 Query: 476 VGQIIEK 482 VG +E+ Sbjct: 433 VGAAVEQ 439 >gi|254465244|ref|ZP_05078655.1| amidase [Rhodobacterales bacterium Y4I] gi|206686152|gb|EDZ46634.1| amidase [Rhodobacterales bacterium Y4I] Length = 443 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 130/477 (27%), Positives = 207/477 (43%), Gaps = 64/477 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 + + +I V L Y+ AI+ Y +V +A A AE +++R G R L+G+ Sbjct: 16 IEAGEIGPVALTRCYLDAIDAHPLTDRIYTQVTRDRALAEAEAAEQRAGLGLRRSPLDGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS-- 132 P+ KD F + G T++ S +L G P ++ V + G V LGK +M E A Sbjct: 76 PVSWKDLFDSAGTATESGSDLLKGRVPDQDAAVLRNATLMGTVCLGKTHMSELAFSGLGF 135 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFT 191 N P ++ D+ G S +AA F L AA IG+DTGGS+R PA++ Sbjct: 136 NPVKQTPPCVN--------DQGAAPGGSSSGAAASVAFGLAAAGIGSDTGGSVRIPAAWN 187 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG+K T GR + G++ D G + R+V D+ +LL + G P Sbjct: 188 DLVGLKTTSGRITLEGVVPLCLKFDTVGPLARSVEDAGLLLGVLEGTAG----------P 237 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 D +++G + D L P I +++ ++ LK+AGA IV + +P + A+ Sbjct: 238 DLRNP--AALKGRRFADLQNVVQDDLDPKIAAAYRETLAKLKEAGALIVPLEVPELEEAM 295 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 ++ EA YGL KD++E E+ R G S Sbjct: 296 GLSPVLYTTEA-----------YGLW---KDVIEAAPQL----MYAEILERFRTGAQ-FS 336 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ---GVDVILTPTTPTSAFPLGKEENNSGSMGH 428 Y + + + + R A++Q G D +L+P +P P E S + Sbjct: 337 GPDYVAAWAKLEQCRM--------AWDQAVAGFDAVLSPASPN--LPPNLERLQSDHDYY 386 Query: 429 IYNDVF----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +++ T N+ G+ A+S+P GLQ++GQP EE L G IE Sbjct: 387 VQSNLLALRNTRVGNLMGVCALSLPTGTPS----CGLQVLGQPDCEEALLRTGAAIE 439 >gi|115360813|ref|YP_777950.1| amidase [Burkholderia ambifaria AMMD] gi|115286141|gb|ABI91616.1| Amidase [Burkholderia ambifaria AMMD] Length = 471 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 136/499 (27%), Positives = 219/499 (43%), Gaps = 50/499 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL ++ +E + +D+S+ ELV S ++ +E N +NA ++V+A A AA E+D Sbjct: 4 ELWRLSAAEMAAYVARRDVSSTELVHSCLRRLEQVNPVINAIVDVLADSALQAASEADAA 63 Query: 63 IING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G L G+P+ +K T G T G +S VT L + GA+++G+ Sbjct: 64 IARGAPVGPLHGVPVTVKINVDTAGRATTNGVRAFAGLLAQEDSPVTANLRNAGAIVIGR 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N F+ + +G +PW TPGGSSGG++AAVA + A + G D G Sbjct: 124 SNAPAFSYRWFTDNELHGRTSNPWNP-----SLTPGGSSGGAAAAVAAGIGAIAHGNDLG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPSLDQA-GIITRTVRDSAILLKAI 235 GSIR PA G G++P+ GR + A L G + RTV D + L A+ Sbjct: 179 GSIRYPAYACGVAGLRPSTGRVPAYNATQSKDRTLAVQLASVQGPLARTVGDLRVALDAM 238 Query: 236 AGYDECDATCVNLPVPDYER----ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 A D DA +PV R + ++ G+P + P + + +Q W Sbjct: 239 AVGDARDAWW--MPVAPVARDATFPVRVAVCPALPGVPSD-------PVVVEAVRQAARW 289 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L++AG + E P A + + EA S L G I++ + Sbjct: 290 LEEAGCVVEEAQPPRIAEACTLWLDLVTNEARSGL-------------GDVIMQHGDAAI 336 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 F + + L+S + Y+ RT + RD+ + F + ++L P + Sbjct: 337 RTAFASQRR---------LASPLDLAGYMNGLARRTALLRDWQQFFTR-YPLLLMPVSCA 386 Query: 412 SAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 F + +++ +M I +A + GLP +SVP + +P G+QL+ F+E Sbjct: 387 QPFAIDADQHGDDAMRDIVAMQGPLLATALLGLPGLSVPTGV-RDGVPTGVQLVAGRFQE 445 Query: 471 ETLFSVGQIIEKEAGYFRP 489 + G+ IE AG F P Sbjct: 446 ALCLAAGEAIEARAGTFTP 464 >gi|255574732|ref|XP_002528274.1| amidase, putative [Ricinus communis] gi|223532311|gb|EEF34112.1| amidase, putative [Ricinus communis] Length = 519 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 151/301 (50%), Gaps = 19/301 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA--AEESDKRIINGDARDLEG 73 + K +++ +LV Y++ I N + IEV A A++ K +G L G Sbjct: 41 FKHKQLTSRQLVHFYLREISTLNPLLRGVIEVNPDALSLADKADQERKAKAHGSRHRLHG 100 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 IPI +KD ATK ++T A S+ L G ++ V KL GA++LGK +M E+A S Sbjct: 101 IPILLKDNIATKDKLNTTAGSYALLGSVVPRDAGVVAKLRRAGAIILGKASMTEWAAFRS 160 Query: 133 NETSYYGPVISPWRSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 N P RS + + P GSS GS +VA L A SIGT+T GSI P+ Sbjct: 161 NHL----PNGYCARSGQGKNPYVLSADPCGSSSGSGISVAANLVAVSIGTETDGSILCPS 216 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD----AT 244 S VGIKPT G SR G++ +P D G + RTVRD+ +L IAG+D D A Sbjct: 217 SANSVVGIKPTVGLTSRAGVVPISPRQDTVGPMCRTVRDAVYVLDTIAGFDHNDHATGAA 276 Query: 245 CVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLS---PTIDKTWQQGISWLKDAGAKIV 300 +P Y+R L + ++G +GI ++ + + + + + + + L+ GA ++ Sbjct: 277 VKFIPKGGYKRFLKPEGLKGKRLGIVRDPFFKFNNDEGSVVAQAFTRHLHTLRQKGAIVI 336 Query: 301 E 301 + Sbjct: 337 D 337 >gi|324325981|gb|ADY21241.1| amidase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 536 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 133/478 (27%), Positives = 212/478 (44%), Gaps = 71/478 (14%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH-T 89 IQ + + +NA E+ A + +R N + +L GIP+ +KD T+ + T Sbjct: 98 IQEHDQNGITLNAVTEINPNAMEEARKLDQERGRNKKS-NLYGIPVIVKDNVQTEKVMPT 156 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISP 144 A +++L + ++T+ +KL + GA +LGK NM E+A S + G ++P Sbjct: 157 SAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNP 216 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + + F GSS GS+ VA +IGT+T GSI PA+ VG++P+ G S Sbjct: 217 YGPI----TFDTSGSSSGSATVVAADFAPLAIGTETTGSIVAPATQQSVVGLRPSLGMVS 272 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP---DYERALD-QS 260 R GII A +LD AG I RTV+D+A L + YDE DA + DY + L Sbjct: 273 RSGIIPLAETLDTAGPIARTVKDAATLFNIMVSYDEKDAMTEKMKEKERMDYTKDLSIDG 332 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV-EISLPHTQYALPAYYIISP 319 ++G VG+ + +D + Q+ L+DAGA + +I L Sbjct: 333 LKGKKVGVL--FSIDRQDDNRKEVAQKIRKDLQDAGAILTDDIQL--------------N 376 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENT------RSIGFG-QEVKHRIMIGTYVLSS 372 AE NL + Y + D L +N I F Q+ RI G ++ Sbjct: 377 AEGVDNLQT---LEYEFKHNVNDFLSKQKNVPVKSLEEIIAFNKQDSNRRIKYGQTLIEG 433 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE------ENNSGSM 426 ++ I +D FE+ V TS KE E ++ Sbjct: 434 SA-----------KSAITKD---EFEKVVQ--------TSQENARKELDRYLLEKGLDAL 471 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 I ND ++ +AG P ++VPA + P+G+ +G+ F E+ LF++G E+++ Sbjct: 472 VMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQFGEKELFNIGYAYEQQS 528 >gi|33598103|ref|NP_885746.1| indole acetimide hydrolase [Bordetella parapertussis 12822] gi|33566661|emb|CAE38871.1| probable hydrolase [Bordetella parapertussis] Length = 493 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 146/502 (29%), Positives = 223/502 (44%), Gaps = 46/502 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDK 61 +L + E+ L + +I + L +Y+ I ++ ++NA+I V A A A Sbjct: 17 DLASLTAYEAARELAAGEIGSEALTAAYLARIA-AHPELNAFITVDADGALAQARAWDAA 75 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R A+ L G+PI IKD G+ A + L GF P + V Q+L GAV+LGK Sbjct: 76 RAAGAAAQPLGGVPIAIKDNIHVAGLPNTAGTPALRGFVPRAHAPVVQRLVQAGAVILGK 135 Query: 122 LNMDEFAMGSSN-ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 NM E A G S T+++G R+ T + GGSS GS AAV L A++GTDT Sbjct: 136 TNMHELAYGVSGYNTAFHGERTVGVRNAYDTARIA-GGSSAGSGAAVGARLAPAALGTDT 194 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 G SIR PA+ G VG++PT GR GI + + D G + +V D +LL A+ + Sbjct: 195 GASIRLPAALNGGVGLRPTVGRYDAAGITPISHTRDTPGPMANSVTD-VMLLDAVISGEP 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 A P+P + +G+P + L P I + + L+ AG ++ Sbjct: 254 APA-----PIPATR---------IRLGLPAWF-WTGLDPAIAAVARAALDKLRAAGVDLI 298 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARY----DGVRYGLRVE-GKDILEMY-----ENT 350 E+ +P + E S LA Y D + Y R E G D + + Sbjct: 299 ELDMPGLKE--------QNQEISFVLALYEQKMDLIDYLRRYEAGPDFDGVVAQIASPDV 350 Query: 351 RSIGFGQEVKHRI--MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTP 407 R+I R+ G + Y R I RD AF + +D +L P Sbjct: 351 RAIFTDMIAPLRLPGPDGAGLDLEPLYREAIATGRPALIGIYRD---AFARHRIDALLFP 407 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T P A G + ++ + + +V + AGLP +S+PA L +P+GL+L G P Sbjct: 408 TVPVGAPLAGPDASSLENFARLARNVDP--GSNAGLPGLSLPAGLDAHGLPVGLELDGLP 465 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 + + ++G ++E G P Sbjct: 466 GEDRKVLAIGLMLETILGRLAP 487 >gi|113868064|ref|YP_726553.1| amidase [Ralstonia eutropha H16] gi|113526840|emb|CAJ93185.1| Amidase [Ralstonia eutropha H16] Length = 461 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 122/480 (25%), Positives = 220/480 (45%), Gaps = 43/480 (8%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 R +++S VE++ S + IE+ + A V A++A AAA ++ R + G L+G+P Sbjct: 18 RQRELSPVEVMQSVLDRIEHWEPGIRAMYVVHAEQALAAARSAEARWLAGTPNGPLDGVP 77 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +K+ AT+G S ++ +L + GA+++GK M +F + + Sbjct: 78 VTLKENIATRGTPVPLGSAATVLAPAPADAPAAARLLEAGAIVVGKTTMPDFGFLGAAPS 137 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S++ +PW+ +T SS G+ AA A +GTD GGS+R PASF G G Sbjct: 138 SFHPLTRNPWKLDRNTGG-----SSSGAGAAAAAGYGPLHLGTDIGGSVRIPASFCGVFG 192 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE- 254 +KP++GR + + G +TRTV D+A+ ++AI+ D D ++LP D Sbjct: 193 LKPSHGRVP----VHPPAAARVIGPLTRTVADAALAMQAISRPDARD--YMSLPPQDIAW 246 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + L++ I+G+ +G+ +L P+ D W DA + ++ H A Sbjct: 247 QQLERDIRGLRIGL-------WLDPSGD--------WQVDAEVRAAVLAAAHLFEQGGA- 290 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++ P + + G+ + + + D+ M S+ G K GT L+ Sbjct: 291 -VVEPVRDWTTMDMRIGMAHFFTMRCRVDLAGMPPERASLAAGYIRKAAEFAGT--LTPE 347 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 + R +++ R+ T A Q D +++P +P P + NSG + + Sbjct: 348 QTFQAFTRMQQL-----REATVAATQPYDFVISPVSPV--LPFAADAINSGGDLPLKDSH 400 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 FT N + PA S+P + +P+GLQ+ G+ F + + + E+ + P + W Sbjct: 401 FTAVFNHSEQPAASIPCGMSRDGLPIGLQISGRRFDDLGVLQLAHWFERAS---EPQRQW 457 >gi|323143693|ref|ZP_08078364.1| putative peptide amidase [Succinatimonas hippei YIT 12066] gi|322416526|gb|EFY07189.1| putative peptide amidase [Succinatimonas hippei YIT 12066] Length = 520 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 139/512 (27%), Positives = 224/512 (43%), Gaps = 70/512 (13%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V++ + ++ +SA ELVD Y++ I+ + +N+ I + A A++ D +I +G+ Sbjct: 35 VTQIHEAMQEGKLSAHELVDYYLKRIKVYDGALNSII-TINPNALTEADKIDAKIASGEP 93 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI +KD + T + T + + +P ++ KL GA++L K N+ E Sbjct: 94 LGPLYGIPILLKDNYDTADMKTTSGALAFKDLQPVKDAFTVAKLRQAGAIILAKTNLTEL 153 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A +S G ++P+ D T GSSGG+ AAVA G+DT SIR P Sbjct: 154 ARHGMTVSSMGGQTLNPY---DLTRTPG--GSSGGTGAAVAANFAVMGTGSDTVNSIRSP 208 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC-- 245 +S VGI+PT G SR GI + D G I R V D+A++L +AGYD D + Sbjct: 209 SSANSLVGIRPTKGLVSRTGISPCSDWQDMGGPIARNVADAALMLSVMAGYDPQDQSTNV 268 Query: 246 -VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS------PTIDKTWQQGISWLKDAGAK 298 N + +Y ALD T G+ K +L L+ P + + I L GA+ Sbjct: 269 IKNKKIENYTDALD------TDGL-KGKKLALLTTNLGEDPEVLRIVNSAIDDLTALGAE 321 Query: 299 IVEISLPHTQYA-------------LPAY--YIISPAEASSNLARYDGVRYGLRVEGKDI 343 ++++ LP + A P Y+ S SS + V+ GL Sbjct: 322 VIKVDLPQLKLADLLKNNDVQEWEQAPYLDKYLASIGSGSSIKTAAEYVKSGLLTPSI-- 379 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + E TR + + + + +R + L A I + ++ +AF + Sbjct: 380 --VNEMTRMVNEKDPLNNPKYL------ARIKKNKELAAN-ITEFMHKNKIDAFVYPLQS 430 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------M 457 +L T S G+ N G M + G PAI++P + Sbjct: 431 VLVVKTTESK---GQYARN-GLMASVM-----------GFPAITLPGGFSSSNDTAPIGV 475 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 P+G++L+G+PF E L S+G E+ +P Sbjct: 476 PVGIELMGEPFSESKLISMGYAYEQGTHNRKP 507 >gi|298247230|ref|ZP_06971035.1| Amidase [Ktedonobacter racemifer DSM 44963] gi|297549889|gb|EFH83755.1| Amidase [Ktedonobacter racemifer DSM 44963] Length = 456 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 122/497 (24%), Positives = 213/497 (42%), Gaps = 58/497 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ F + ++ +R +SA E++ ++ IE N +NA I + A++A A E+D Sbjct: 2 DIVFASTTQLASAIRKGHVSATEVLQVHLAQIEAHNPTLNAVITLDAERAYERAREADAA 61 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L G+P +KD AT G+ T L + P +STV +L G +++GK Sbjct: 62 LGRGEIWGPLHGVPFTLKDAHATAGMRTTTGFPPLADYVPQEDSTVAARLKAAGGILMGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ + +G +PW + TPGGSSGG++AA+A + IGTD Sbjct: 122 TNVPTMLADYQSANPIFGSTNNPWNV-----ERTPGGSSGGAAAALASGMTPFEIGTDLS 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS------LDQAGIITRTVRDSAILLKAI 235 SIR PA F G G+KPT R G+I P + G + R+V D A+L I Sbjct: 177 ASIRIPAHFCGVFGLKPTEQRVPLTGMIPGLPGPRPVRIMSCIGPMARSVEDLALLYALI 236 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG D D + V + + +++ + V + ++ I ++ L Sbjct: 237 AGPDGQDTEVAPVLV---DEMPELALKNLRVAFAPTFPGIPVATEIRTALEELAQQLTPL 293 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 A + E +LP + + +LAR G G+ + G E E+ ++ Sbjct: 294 CATVEEATLPQVDF-------------NQDLAR-AGAMIGM-MTGAFQPEAQEHPTTL-- 336 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + YL A R + F++ D++L P T +AFP Sbjct: 337 ---------------------AQYLEALHYRDQSILAWERFFDEW-DILLCPPTMVTAFP 374 Query: 416 LGKE----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + + + + + + N G P +P + +P+G+Q++G+ ++E Sbjct: 375 HCQPGSPIQVDDQEVTYYMTAAYGTLFNYTGHPVAVLPYKRDQAGLPIGIQVVGKRWQES 434 Query: 472 TLFSVGQIIEKEAGYFR 488 L +V Q + + G F+ Sbjct: 435 FLLAVAQALTEVTGEFQ 451 >gi|121594591|ref|YP_986487.1| amidase [Acidovorax sp. JS42] gi|120606671|gb|ABM42411.1| Amidase [Acidovorax sp. JS42] Length = 516 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 132/483 (27%), Positives = 220/483 (45%), Gaps = 39/483 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E R R+ + +IS VEL+ + I IE N +NA +ARA A+ +++ + G Sbjct: 10 LSANELRHRIGTGEISPVELLQACIDRIEAVNPYVNAVTATCYDRARAEAQAAERAVRAG 69 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+G+KD AT G+ T S I P ++ + +L GA++ GK N+ Sbjct: 70 EPLGLLHGLPMGVKDLEATAGLLTTYGSPIYRENIPAQDNVLVARLRAAGAIVTGKTNIP 129 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G+++ +G +P+ + GGSSGGS+AA+A + G+DTGGS+R Sbjct: 130 EMGAGANSRNVVWGATGNPF-----DPRLNAGGSSGGSAAALACDMLPVCTGSDTGGSLR 184 Query: 186 QPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA+ G VG +P+ G S ++ + P + G + RT+ ++ + L A AG D Sbjct: 185 IPAAKCGVVGFRPSPGVVPSSRKLLGWTP-ISVVGPMGRTMAEACLQLAASAGLSAGDPL 243 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L + + G+ VG +++ + I ++ I ++ E+ L Sbjct: 244 TYPLDPHSFLHLEPADLGGLRVGYTEDFGACAVDDGIRAVFRAKIGAMRHLFRSCEEVRL 303 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-NTRSIGFGQEVKHRI 363 + ++ R + G+R E YE + S+G + + Sbjct: 304 E-----------LGDVHRCFDVLRAESFLAGMR-------EAYERDPASLGPNTRANYEM 345 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEE 420 +L DS + +A + R L + F EAF DVIL PTTP S FP L Sbjct: 346 GAAMSLL-----DSAWAQAEQTRILAR--FQEAFAN-FDVILAPTTPVSPFPWTALYASH 397 Query: 421 NNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N + Y + T + PA+SVP MP GLQ++G+ + L S+G Sbjct: 398 INGEPQANYYRWLALTYVTTLTTHPALSVPCGRDTAGMPFGLQVVGRFRDDHRLLSIGLG 457 Query: 480 IEK 482 +E+ Sbjct: 458 LEQ 460 >gi|225555498|gb|EEH03790.1| amidase [Ajellomyces capsulatus G186AR] Length = 645 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 141/514 (27%), Positives = 224/514 (43%), Gaps = 83/514 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L + S+V+LV++YI+ I N ++ E+ A A D +G R L G+ Sbjct: 146 LSRRCFSSVDLVNAYIKRIAEVNDTLHVVAEL-NPDAVNIARHLDVERRHGKIRGPLHGL 204 Query: 75 PIGIK-DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----M 129 PI IK + +HT + S+ L G +STV KL + G ++LG + E+A Sbjct: 205 PIVIKGNIGVADKMHTTSGSYALLGAELPEDSTVVAKLKEAGVIILGMAGLSEWAGFRAS 264 Query: 130 GSSNETSYYG-PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 SSN S YG VI + + P GSS GS A L A++GT+T GSI P+ Sbjct: 265 NSSNGWSAYGGQVIGAYYP-----RQDPAGSSSGSGVASDLGLAFAALGTETSGSIISPS 319 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 VGIKPT G SR +I + LD G + RTV+D+A LL+ IAG D D Sbjct: 320 QQNNIVGIKPTVGLTSRHLVIPISQHLDTVGAMARTVKDAAKLLQIIAGPDSSDNYTSAF 379 Query: 249 P---VPDYERALDQS-IQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEI 302 P VPDY A S ++G +GIP L++LS P + + + ++ L D+GA IV Sbjct: 380 PFDCVPDYPAACQHSALKGKRIGIPTNV-LEFLSTDPAVIEPFNTAVTLLADSGAIIVR- 437 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVK 360 Y+ ++ SP + Y + G ++ N +I +++ Sbjct: 438 ---DANYSAYEEFMTSPLPVQ--------ILYADLINGIANYCSKLKTNPNNIHNLSDLR 486 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP----- 415 H+++ + RD T ++++ + + + T+P +P Sbjct: 487 -----------------HFVQTFPLEDYPDRD-TRSWDEALRIGVNNTSP-EFWPIYQKL 527 Query: 416 ---------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA--------------- 451 LG N+ + ++V +A MAG P ++VP + Sbjct: 528 LQMVGEGGVLGALRRNNLDAIVLPSNVSPLASGMAGTPMVTVPMSAWPADTKVVTSPRDL 587 Query: 452 -LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 L MP+GL +G + EE L + E+++ Sbjct: 588 VLSAPGMPMGLSFMGDLWSEEALIGMAYAYEQKS 621 >gi|330890305|gb|EGH22966.1| amidase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 362 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 129/261 (49%), Gaps = 7/261 (2%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G A Sbjct: 18 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQA 77 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 78 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 137 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 138 GWTGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 192 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D + Sbjct: 193 GSFCGAFALKGTLGRIPTWP-WSATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQALP 251 Query: 248 LPVPDYERALDQSIQGMTVGI 268 P + DQ + + +G Sbjct: 252 APDESFLARCDQPLNPLRIGF 272 >gi|331698406|ref|YP_004334645.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326953095|gb|AEA26792.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 527 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 115/441 (26%), Positives = 190/441 (43%), Gaps = 29/441 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R+ L G+ +G+KD A GI S L + P ++ V +L D GA + GK Sbjct: 89 RVTGAAGGPLAGLTVGVKDNLAVAGIPISNASRTLS-YTPTTDAVVVSRLLDAGASITGK 147 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+F+ + E+S+ GP + S + G S S AV +IG D G Sbjct: 148 TNLDDFSTSGTGESSWLGPARNAVDPSRSAGGSSGGSGSAVRSGAVD-----LAIGVDEG 202 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PASF G V IK T G G+ ++D I TV +A +L ++G+ + Sbjct: 203 GSARIPASFNGVVSIKGTQGLVPSHGLTYMDHTIDSVCPIASTVGLTARMLDVMSGHSDR 262 Query: 242 DATCV-NLPVPDYERA-LDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAK 298 D V P P A L + GMT+G+ + D P + ++ + L+ AGA Sbjct: 263 DPQWVRGRPAPTTAAAVLGDGVAGMTIGVVAQGCGEDLCEPGVLAGFRDSCAALEAAGAT 322 Query: 299 IVEISLP--HTQYALPAYYIISPAEASSNLARYDGVRYG----LRVEGKDILEMYENTRS 352 +V +S+P +A+ ++ + DG Y + VE M + Sbjct: 323 VVPVSVPLWSDGWAIATALLVHLGWMG---VQSDGAGYSHLGEVDVERTHAFAMVRRLEA 379 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 F K ++ G Y L + +++ +A +R + + A Q D+++TPTTP Sbjct: 380 DAFPPFFKVWLLAGRY-LHDTYFSTYFAKAANLRRALTAEIDVAL-QSCDLLVTPTTPQV 437 Query: 413 A-----FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQ 466 A P E + + N T N++G P+++VP+ + MP +Q++ Sbjct: 438 APVLLDRPAEDPELLARGTTMVAN---TCVTNLSGHPSLAVPSGVDPATGMPTSIQIVAP 494 Query: 467 PFREETLFSVGQIIEKEAGYF 487 + + F G ++E G Sbjct: 495 HWEDARTFRAGAVVEAAVGVM 515 >gi|218246217|ref|YP_002371588.1| amidase [Cyanothece sp. PCC 8801] gi|218166695|gb|ACK65432.1| Amidase [Cyanothece sp. PCC 8801] Length = 467 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 130/488 (26%), Positives = 217/488 (44%), Gaps = 45/488 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L F + + +R + IS +E+ Y+ I+ + Q+ ++ V A++A A A+ + Sbjct: 4 SDLAFTPALKLAELIRDRQISPLEITQLYLDRIQKYDPQIGSFFTVAAEQAIAEAKAKTE 63 Query: 62 RIIN-GDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ + D L G+P IKD A G+ L Y+ V ++ G + Sbjct: 64 QLASLSDPNALPPFFGVPTAIKDLNAVAGMPVSYGVAALKNNIAEYDDGVVSRMKGAGFI 123 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK + E + P +PW ++D +T GGSSGG+SAAVA C + G Sbjct: 124 ILGKTATSQLGSFPYTEPPGFPPTRNPW-NLD----YTSGGSSGGASAAVAAGFCPIAQG 178 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GGSIR PA+ G VGIKP GR S + + + +G + RTV D+A LL I+G Sbjct: 179 SDGGGSIRTPAACCGLVGIKPARGRVSHAPVGDYQSGIATSGPLARTVADAAALLDVISG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAG 296 Y D + P + A Q + + + P I + + + L++ G Sbjct: 239 YLTGDPYWLPSPEVPFLAATRQLPPPLKIAFATQINPFPDAEPVIKQAVLKMVQLLEEMG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + E S P +++P + + + V G+ +E + + G Sbjct: 299 HSLTE-SCPDVS------GLVTP---FTRIWQAGVVAAGIPMEALSPINQW-------LG 341 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ GT YL+A + +I R F+Q D++L P + Sbjct: 342 EQA------GTA--------GDYLQAVREMQIISRQIVAFFDQ-FDLLLLPVYLHQPIKI 386 Query: 417 GKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+ ++ S ++ I V N GLP I++P + EK +P+G+QLIG+P E TL Sbjct: 387 GEWDDLSPEETVQKIIQWVAPCPPANATGLPGITLPMGIDEKGLPVGVQLIGKPADELTL 446 Query: 474 FSVGQIIE 481 V +E Sbjct: 447 IRVAAQLE 454 >gi|218529262|ref|YP_002420078.1| allophanate hydrolase [Methylobacterium chloromethanicum CM4] gi|218521565|gb|ACK82150.1| allophanate hydrolase [Methylobacterium chloromethanicum CM4] Length = 625 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 114/419 (27%), Positives = 179/419 (42%), Gaps = 37/419 (8%) Query: 69 RDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+P +KD G+ T A C+ F P + +L GA+++GK N+D+F Sbjct: 73 KPLWGVPFAVKDNLDVAGLPTTAACADF--AFVPSETAPCVARLLAAGAILIGKTNLDQF 130 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + P +P ++++ PGGSS GS+ AVA L A ++GTDT GS R P Sbjct: 131 ATGLVGLRT---PHPAPRNALNA--DLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVP 185 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KP+ G S G++ +LD + TV D+ + + +A YD D + Sbjct: 186 AGLNNVVGLKPSLGSVSSRGLLPACRTLDTVSVFAGTVADADRVFRIMAAYDAADPYSRD 245 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPH 306 LPVP L G+ VG+P L + P + + G+ L + + L Sbjct: 246 LPVPTQPPGLP---PGLRVGMPDAASLRFGGDPLSEAAFVAGLDDLATLTGRPDAVDL-A 301 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +A+ A P A RY VR + + ++ TR++ IG Sbjct: 302 PMFAIAALLYDGPWVAE----RYQAVRPLIE---RSPQALHPTTRAV-----------IG 343 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + L R R +A + +DV++ PT P E + G Sbjct: 344 RATAFTAADAFAGL----YRLAELRRAADAVWEHIDVLVVPTYPRPVACAELEVDPIGPN 399 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + +T VN+ L A++VP +P GL LI R+ L ++G + AG Sbjct: 400 SEL--GTYTNFVNLLDLCALAVPGRFRTDGLPAGLTLIAPRGRDGLLAALGARLHAAAG 456 >gi|33602996|ref|NP_890556.1| indole acetimide hydrolase [Bordetella bronchiseptica RB50] gi|33568627|emb|CAE34385.1| probable hydrolase [Bordetella bronchiseptica RB50] Length = 493 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 146/502 (29%), Positives = 223/502 (44%), Gaps = 46/502 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDK 61 +L + E+ L + +I + L +Y+ I ++ ++NA+I V A A A Sbjct: 17 DLASLTAYEAARELAAGEIGSEALTAAYLARIA-AHPELNAFITVDADGALAQARAWDAA 75 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R A+ L G+PI IKD G+ A + L GF P + V Q+L GAV+LGK Sbjct: 76 RAAGAAAQPLGGVPIAIKDNIHVAGLPNTAGTPALRGFVPRAHAPVVQRLVQAGAVILGK 135 Query: 122 LNMDEFAMGSSN-ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 NM E A G S T+++G R+ T + GGSS GS AAV L A++GTDT Sbjct: 136 TNMHELAYGVSGYNTAFHGERTVGVRNAYDTARIA-GGSSAGSGAAVGARLAPAALGTDT 194 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 G SIR PA+ G VG++PT GR GI + + D G + +V D +LL A+ + Sbjct: 195 GASIRLPAALNGGVGLRPTVGRYDAAGITPISHTRDTPGPMANSVTD-VMLLDAVISGEP 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 A P+P + +G+P + L P I + + L+ AG ++ Sbjct: 254 APA-----PIPATR---------IRLGLPAWF-WTGLDPAIAAVARAALDKLRAAGVDLI 298 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARY----DGVRYGLRVE-GKDILEMY-----ENT 350 E+ +P + E S LA Y D + Y R E G D + + Sbjct: 299 ELDIPGLKE--------QNQEISFVLALYEQKMDLIDYLRRYEAGPDFDGVVAQIASPDV 350 Query: 351 RSIGFGQEVKHRI--MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTP 407 R+I R+ G + Y R I RD AF + +D +L P Sbjct: 351 RAIFTDMIAPLRLPGPDGAGLDLEPLYREAIATGRPALIGIYRD---AFARHRIDALLFP 407 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T P A G + ++ + + +V + AGLP +S+PA L +P+GL+L G P Sbjct: 408 TVPVGAPLAGPDASSLENFARLARNVDP--GSNAGLPGLSLPAGLDAHGLPVGLELDGLP 465 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 + + ++G ++E G P Sbjct: 466 GEDRKVLAIGLMLETILGRLAP 487 >gi|332529378|ref|ZP_08405339.1| amidase [Hylemonella gracilis ATCC 19624] gi|332041176|gb|EGI77541.1| amidase [Hylemonella gracilis ATCC 19624] Length = 452 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 131/502 (26%), Positives = 219/502 (43%), Gaps = 66/502 (13%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKR 62 + + + D LR+ ++A +LV++ + + + Y V A++ARA A+ SD Sbjct: 1 MTLPTLQQQADALRTGQVTARDLVEAALARTSDPAGEGTRVYTRVYAERARAQAQASDCL 60 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLG 120 + G AR LEG+P+ IKD F G T A S +L P + V Q+L GAV++G Sbjct: 61 LGAGLARSPLEGLPVSIKDLFDVAGETTLAGSVVLRDAPPAQAHALVVQRLIAAGAVIMG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NM EFA +YG +PW D PGGS+ G + +V+ + A+IG+DT Sbjct: 121 RTNMTEFAYSGLGLNPHYGTPRNPW---DRATGRIPGGSTSGGAVSVSDGMALAAIGSDT 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R P++ G G KP+ R G++ + LD G + +V A+L ++G Sbjct: 178 GGSVRIPSALCGLTGFKPSARRVPMDGVLPLSIQLDSIGPLAASVVCCAVLDAVLSGEGG 237 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 LP P +++ + + P + + ++ + + + AGA + Sbjct: 238 ------KLPEP-------AALRPLRLAAPLTLVREGMDASVASAFDAALRAVSSAGALVE 284 Query: 301 EISLPH-TQYA-LPAYYIISPAEA----SSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 +++LP Q A + A + AEA ++AR E Y+ Sbjct: 285 DLALPEFAQLASINAQGGFTAAEAWAWHRPHIARAP--------------ERYD------ 324 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ---GVDVILTPTTPT 411 V RI G + ++ D + ARK + A EQ G D +L PT P Sbjct: 325 --PRVISRIRRGAALSAADWLD--LMAARKA-------WVAAVEQRIAGYDALLLPTVPV 373 Query: 412 SAFPLGKEENNSGSMG--HIYNDVFTVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQP 467 A P+ + + G ++ + +N A+S+P C + P+GL + G Sbjct: 374 VAPPIAALQESDELYGATNLLMLRNSTLINFLDGCALSLP---CHPRGGAPVGLTIAGSN 430 Query: 468 FREETLFSVGQIIEKEAGYFRP 489 + + S+G +E E P Sbjct: 431 GSDRRILSIGMAVEAELKKISP 452 >gi|221369531|ref|YP_002520627.1| Amidase [Rhodobacter sphaeroides KD131] gi|221162583|gb|ACM03554.1| Amidase [Rhodobacter sphaeroides KD131] Length = 477 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 131/497 (26%), Positives = 217/497 (43%), Gaps = 50/497 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L +++ ++ R++ IS VE+V + IE S +NA ++A A S+K Sbjct: 4 TPLAYLSAAQLTALYRARKISPVEVVTDALARIEASGDSLNAVCFTYPEEALEEARASEK 63 Query: 62 RIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R ++G + ++GIP +KD G T S + + V Q+L + GAV+ Sbjct: 64 RYMSGAQKPGMIDGIPAALKDETMMAGKVTTYGSLLYADHVAAKSAPVVQRLVEAGAVIH 123 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + EF+ + +G +PW FTPGGSSGGS AA+A L + G+D Sbjct: 124 ARTTTPEFSCAPFCHSRQWGVTRNPWNL-----AFTPGGSSGGSGAALAAGLAPLATGSD 178 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS +G VG KP YGR + P + G + RTV D ++ +AG Sbjct: 179 IGGSIRIPASASGVVGFKPPYGRVPSTPPFNLDP-YNHPGPMARTVEDCLLMQNVLAGPH 237 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + P E LD+S ++G + ++ + P + + + GA+ Sbjct: 238 PEDIASLK---PKLELRLDRSGVKGWKIAYSLDFGFMEIDPAVRANTLAALDVFRALGAE 294 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + E++LP + + + A A+ + A + E ++ L Y F +E Sbjct: 295 VTEVALPWS-------WEVYRAAATHHKALFGAWLADYLDEREERLTSYARR----FARE 343 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP--- 415 L++ D YL +I I F E G D+ L PT A P Sbjct: 344 A----------LATTTRD--YLAGMEIEGRIWSHFGPMME-GFDLFLCPTLAIPAVPAEF 390 Query: 416 -------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 + EE +S +G F + ++ P +SVP+ +P G+QL+G+ + Sbjct: 391 DFSDPLIINGEEIDS-YLGWTMAWPFNM---LSRCPVLSVPSGHAPNGVPTGIQLVGRTY 446 Query: 469 REETLFSVGQIIEKEAG 485 ++++F+ G E G Sbjct: 447 EDQSVFTAGLAYETALG 463 >gi|257059268|ref|YP_003137156.1| Amidase [Cyanothece sp. PCC 8802] gi|256589434|gb|ACV00321.1| Amidase [Cyanothece sp. PCC 8802] Length = 467 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 130/488 (26%), Positives = 217/488 (44%), Gaps = 45/488 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L F + + +R + IS +E+ Y+ I+ + Q+ ++ V A++A A A+ + Sbjct: 4 SDLAFTPALKLAELIRDRQISPLEITQLYLDRIQKYDPQIGSFFTVAAEQAIAEAKAKTE 63 Query: 62 RIIN-GDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ + D L G+P IKD A G+ L Y+ V ++ G + Sbjct: 64 QLASLSDPNALPPFFGVPTAIKDLNAVAGMPVSYGVAALKNNIAEYDDGVVSRMKGAGFI 123 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LGK + E + P +PW ++D +T GGSSGG+SAAVA C + G Sbjct: 124 ILGKTATSQLGSFPYTEPPGFPPTRNPW-NLD----YTSGGSSGGASAAVAAGFCPIAQG 178 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GGSIR PA+ G VGIKP GR S + + + +G + RTV D+A LL I+G Sbjct: 179 SDGGGSIRTPAACCGLVGIKPARGRVSHAPVGDYQSGIATSGPLARTVADAAALLDVISG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAG 296 Y D + P + A Q + + + P I + + + L++ G Sbjct: 239 YLTGDPYWLPSPEVPFVAATRQLPPPLKIAFATQINPFPDAEPVIKQAILKTVQLLEEMG 298 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + E S P +++P + + + V G+ +E + + G Sbjct: 299 HSLTE-SYPDIS------GLVTP---FTRIWQAGVVAAGIPMEALSPINQW-------LG 341 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ GT YL+A + +I R F+Q D++L P + Sbjct: 342 EQA------GTA--------GDYLQAVREMQIISRQIVAFFDQ-FDLLLLPVYLHQPIKV 386 Query: 417 GKEENNSG--SMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+ ++ S ++ I V N GLP I++P + EK +P+G+QLIG+P E TL Sbjct: 387 GEWDHLSPEETVQKIIQWVAPCPPANATGLPGITLPMGIDEKGLPVGVQLIGKPADELTL 446 Query: 474 FSVGQIIE 481 V +E Sbjct: 447 IRVAAQLE 454 >gi|187924153|ref|YP_001895795.1| amidase [Burkholderia phytofirmans PsJN] gi|187715347|gb|ACD16571.1| Amidase [Burkholderia phytofirmans PsJN] Length = 487 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 142/275 (51%), Gaps = 13/275 (4%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESD--KRIINGDA 68 D R K +SAVE++D+++ I+ N Q+NA + + V +ARAA +S + I G Sbjct: 27 DLQRKKSVSAVEILDAHLSRIDTVNPQVNALVTIADPVTLRARAAEIDSQWSRGIWQG-- 84 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ KD AT+G+ T S I P + + + ++ GA+M+GK N EF Sbjct: 85 -PLHGLPVSQKDLTATQGVRTTFGSKIFKHHVPQHSALIARRCDAAGALMIGKSNTPEFG 143 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 GS +G +PW S SSGG++A+VA + + G+D GGS+R PA Sbjct: 144 AGSHTFNEVFGVTRNPWDLSKSAGG-----SSGGAAASVACGMSPLACGSDMGGSLRNPA 198 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++ VG++P+ GR R ++ +L G + R V D+A+LL AIAG AT ++ Sbjct: 199 AWNAVVGLRPSPGRVPRAPDLNGWATLGVDGPMARDVADTALLLSAIAGPSGETATEISE 258 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK 283 P + +L + +G + + + + P I + Sbjct: 259 PGSRFALSLQRDFRGTRIAMSVQLAGLAVDPEIQR 293 >gi|326480489|gb|EGE04499.1| amidase [Trichophyton equinum CBS 127.97] Length = 559 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 14/299 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 +D L ++V+LV +Y+ I NS + A E+ A + ++R + L Sbjct: 74 QDGLTKGCFTSVDLVKTYVARIAEVNSTVRAVTEINPDALTIAKQMDNERKMGKLRGPLH 133 Query: 73 GIPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--- 128 G+PI IK+ F + + A S+ + G R ++TV +L + G V+LGK ++A Sbjct: 134 GLPIVIKNNIFTDDKMSSTAGSYAIFGARTSADATVATRLREAGLVILGKSGASQWANFR 193 Query: 129 -MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + S+N S YG ++ + P GSS GS L A++GT+T GSI P Sbjct: 194 SINSTNGWSAYGGQVTAAYIKNQD----PSGSSSGSGVVSDLGLAFATLGTETSGSIVSP 249 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A + VG+KPT G SR ++ + D G + R+V+D+A LL+ IAG D D Sbjct: 250 ADKSNIVGLKPTVGLTSRRFVVPISERQDTVGPMARSVKDAAYLLQVIAGKDSNDNYTSA 309 Query: 248 LP---VPDYERALD-QSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVE 301 +P +PDY +A D +++G +G+P+ + SP T+ + Q ++ +K AGA IVE Sbjct: 310 IPFDTIPDYVKACDVNALKGKRIGVPRNVIKVFGSPKTVVDQFNQALAVMKKAGAIIVE 368 >gi|326472805|gb|EGD96814.1| amidase [Trichophyton tonsurans CBS 112818] Length = 571 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 14/299 (4%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 +D L ++V+LV +Y+ I NS + A E+ A + ++R + L Sbjct: 74 QDGLTKGCFTSVDLVKTYVARIAEVNSTVRAVTEINPDALTIAKQMDNERKMGKLRGPLH 133 Query: 73 GIPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--- 128 G+PI IK+ F + + A S+ + G R ++TV +L + G V+LGK ++A Sbjct: 134 GLPIVIKNNIFTDDKMSSTAGSYAIFGARTSADATVATRLREAGLVILGKSGASQWANFR 193 Query: 129 -MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + S+N S YG ++ + P GSS GS L A++GT+T GSI P Sbjct: 194 SINSTNGWSAYGGQVTAAYIKNQD----PSGSSSGSGVVSDLGLAFATLGTETSGSIVSP 249 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A + VG+KPT G SR ++ + D G + R+V+D+A LL+ IAG D D Sbjct: 250 ADKSNIVGLKPTVGLTSRRFVVPISERQDTVGPMARSVKDAAYLLQVIAGKDSNDNYTSA 309 Query: 248 LP---VPDYERALD-QSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVE 301 +P +PDY +A D +++G +G+P+ + SP T+ + Q ++ +K AGA IVE Sbjct: 310 IPFDTIPDYVKACDVNALKGKRIGVPRNVIKVFGSPKTVVDQFNQALAVMKKAGAIIVE 368 >gi|124268787|ref|YP_001022791.1| malonamidase E2 [Methylibium petroleiphilum PM1] gi|124261562|gb|ABM96556.1| malonamidase E2 [Methylibium petroleiphilum PM1] Length = 433 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 131/464 (28%), Positives = 202/464 (43%), Gaps = 80/464 (17%) Query: 15 RLRSKDISAVELVD---SYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 RL + + A L D + I A E + A + + + AA + ++R L Sbjct: 15 RLAAGTLDAATLADDTLTRIDAQEAALGAFAALLPLDVARREAATAQRERR------GPL 68 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+G+KD T + T S + G RP ++ + + G V++GK EFA Sbjct: 69 HGLPVGVKDIVDTVALPTAYGSPVYAGHRPRSDAALVGAIRRAGGVVIGKTTSTEFA--- 125 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 Y P + R+ ++ + TPGGSS GS+AAVA L +IGT TGGS+ +PAS+ Sbjct: 126 -----YLHPTAT--RNPNAPGR-TPGGSSAGSAAAVAAGLLELAIGTQTGGSVIRPASYC 177 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G VG KP++G G+ F+ SLD G+ TRTV D+A +A+AG Sbjct: 178 GVVGYKPSFGWLPTAGVRCFSWSLDTVGLFTRTVADAAFFAQALAGR------------- 224 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + G+ +Y LSP + Q+ + L+ AG + E+ LP +A Sbjct: 225 RFAATRPAPTAAPRFGVVIDYPWGPLSPAMATALQEAATRLRTAGHTVREVRLP--AWAA 282 Query: 312 PAYYIISPAEASSNLARYDGVR--YGLRVEGKDILE------MYENTRSIGFGQEVKHRI 363 A+ EA + + ++ VR + + D L + E +R+IG Sbjct: 283 EAF------EAQATVQGWEAVRALHTELTQHADALSPLLRDYLREASRTIG--------- 327 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE--AFEQGVDVILTPTTPTSAFPLGKEEN 421 D+ Y A++I + E GVDV+LTP P A L + Sbjct: 328 ------------DADYDAAQRITAAAREALAEDGLAAHGVDVLLTPGAPDEAPLLSEHST 375 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + S YN ++T + G P + VP PLGLQ+ G Sbjct: 376 GAAS----YNRLWT----LLGTPCVGVPGLRGPHGAPLGLQVTG 411 >gi|254584038|ref|XP_002497587.1| ZYRO0F08976p [Zygosaccharomyces rouxii] gi|238940480|emb|CAR28654.1| ZYRO0F08976p [Zygosaccharomyces rouxii] Length = 1833 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 124/479 (25%), Positives = 208/479 (43%), Gaps = 55/479 (11%) Query: 18 SKDISAVELVDSYIQAIENSNSQM--------------NAYIEVVAQKARAAAEESDKRI 63 +K SA E V+ +++++ N++ ++ A+I +V++ + + Sbjct: 9 TKGWSACEWVEFHLKSVPNASYELLLNLLKSQKCAPEDPAWISLVSESNLQQQWQVLQSK 68 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 ++ L G+PI IKD G+ T A ++P +S V + L D GA+++GK N Sbjct: 69 SKKESLPLYGVPIAIKDNIDVYGVETTAACPSF-AYKPTKDSKVVELLRDAGAIIIGKTN 127 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +D+FA G S YG + +DK GGSS GS A VA + ++GTDT GS Sbjct: 128 LDQFATGLVGCRSPYGKTTCAF-----SDKHVSGGSSAGSGAIVARGVVPLALGTDTAGS 182 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA+ +G+KPT G S G++ SLD I + D+ K + DE + Sbjct: 183 GRVPAALNNLIGLKPTRGVFSCKGVVPACKSLDCVSIFALNLSDAERAFKVLCQPDESND 242 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVEI 302 P+ R+ + + +PK + + T + K + I L+ GA++V I Sbjct: 243 EYSRPFTPNPLRSYPNDV---CIAVPK--TVPWFGETENPKLYANAIESLRLMGARVVTI 297 Query: 303 SLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEG-KDILEMYENTRSIGFGQEV 359 E LAR Y+G R E +D L + S V Sbjct: 298 DF----------------EPLLELARCLYEGAWVAERFEALRDFLAT--DPPSDSLDPTV 339 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 I G ++ + Y R +R + E+ QG+DV+ PT P + P ++ Sbjct: 340 TKIIKSGANYSAADAFKFEYKRQGILRKV------ESLLQGIDVLCVPTCPLN--PTLED 391 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N + + +T VN+A + A+++PA +P G+ LIG+ F + L + + Sbjct: 392 LENEPVLVNSRQGTWTNFVNLADMSALAIPAGFRPDGLPNGVTLIGKKFTDYALLDLAK 450 >gi|255954539|ref|XP_002568022.1| Pc21g09860 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589733|emb|CAP95883.1| Pc21g09860 [Penicillium chrysogenum Wisconsin 54-1255] Length = 583 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 144/530 (27%), Positives = 217/530 (40%), Gaps = 85/530 (16%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + + + L + V+L++ Y+ + + +NA ++V A A A+ D Sbjct: 59 KLEEATIDQIQAELEIGTFTGVQLLECYMDRVHQTQPYLNAILQV-NPDAFAIAKMLDDE 117 Query: 63 IINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G R L GIP +KD A+K + T A S L G +S V + GA++LG Sbjct: 118 RAQGTVRGPLHGIPFIVKDNIASKDRMETTAGSWALLGNVVPRDSYVVHGMRKAGALLLG 177 Query: 121 KLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K + E+A M S+N + + RS + PGGSS GS AV L ++GT+ Sbjct: 178 KAALSEWADMRSNNYSEGFSARGGQCRSAYNF-TVNPGGSSTGSGVAVGANLVPIALGTE 236 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ PA VGIKPT G SR G+I + D G +TVRD+ L AI G D Sbjct: 237 TDGSVINPAQRNSVVGIKPTVGLTSRAGVIPESAHQDTVGTFGKTVRDAVYALDAIYGID 296 Query: 240 ECD----ATCVNLPVPDYERALDQ--SIQGMTVGIPKEY-----RLDYLSPTIDKTWQQG 288 D A PV Y + L +++G GIP E D ++ +D Sbjct: 297 SRDNYTSAQEGLTPVGGYAQFLTNQTALKGAVFGIPWESFWALGDADQIAQLLDL----- 351 Query: 289 ISWLKDAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLARYDGVRYGLRV 338 + ++ AGA IV LPH + I+SP SN + Y ++ Sbjct: 352 VELIESAGATIVNGTELPHYK------KIVSPDGWNWDYGTTRGYSNESSYSYIKVDFYN 405 Query: 339 EGKDILEMYENTRSIGFGQEVKHRI--------MIGTY---------VLSSR----CYDS 377 +D L ENT V++ I + G + +L+S D Sbjct: 406 NLRDYLSEVENTNVRSVEDLVQYNIDNYGSEGGLPGIHPAFGSGQDGLLASLETKGVMDE 465 Query: 378 HYLRARKI--RTLIKRDFTEAFEQG---VDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 Y +A + RT + A +QG +D +L P + + + Sbjct: 466 TYFQALEFCQRTTREEGIDAALKQGNVTLDGLLVPPDVAQSIEIAAQ------------- 512 Query: 433 VFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIE 481 AG P I++PA + + MP GL ++ F E TL IE Sbjct: 513 --------AGYPVITLPAGVNDASGMPFGLAIMNTAFSEATLVKYASAIE 554 >gi|294507671|ref|YP_003571729.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Salinibacter ruber M8] gi|294343999|emb|CBH24777.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Salinibacter ruber M8] Length = 611 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 223/504 (44%), Gaps = 82/504 (16%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F ++SE LR++ +++VEL + +Q + + +++A I ++A AAA +D Sbjct: 166 ELAFASISELAHLLRARKVTSVELTELALQRLRRYDDRLHAVISYTEERALAAARRADDE 225 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G R L G+P G KD A +G T + +TV ++L D GAV++ K Sbjct: 226 LDAGTWRGPLHGVPYGAKDLLAVQGTKTTWGAEPYKTQTIDETATVIERLDDAGAVLVAK 285 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L++ A G + Y +PW ++D GSS G +AAV+ +IG++T Sbjct: 286 LSLGALAWG---DVWYDATTKNPW-NLDQGSS----GSSAGPAAAVSAGCVPFAIGSETL 337 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P++ G G +PT+G R G ++ + ++D+ G I R+ D A + AI G D Sbjct: 338 GSIVSPSTRCGVTGHRPTFGAVGRGGAMALSWTMDKLGPIARSALDCAHVYDAIRGADPK 397 Query: 242 DATCVNLPVP-DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V++P P D ER S + VG +E + DY + + D Q+ + L+ G + Sbjct: 398 DPASVDVPFPFDAER----SAASLRVGYLQEAFEGDYDNQSAD---QKTLDVLRGLGVDL 450 Query: 300 VEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-----RS 352 +S + AL + A A L R DGV +++ ENT R+ Sbjct: 451 EPVSWDVDVPVGALLNTLDVEAAAAFDELTRTDGV--------DELVRQGENTWPNVFRT 502 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT-LIKRDFTEAFEQGVDVILTPTTPT 411 F V+H M ++R L++R A Q +DV+++P+ Sbjct: 503 ARFVPAVEHVQM------------------DRLRVDLMER--AHAVMQDLDVLVSPSF-- 540 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-------KKMPLGLQLI 464 G++G N+ G P + +P AL ++ P + + Sbjct: 541 ----------GGGTLG---------ITNLTGHPCVCLPNALRPVEEGPDARRQPGSISFV 581 Query: 465 GQPFREETLFSVGQIIEKEAGYFR 488 +R++ ++ +++ R Sbjct: 582 APLYRDQHALTLAHAVQQATDIHR 605 >gi|134295054|ref|YP_001118789.1| amidase [Burkholderia vietnamiensis G4] gi|134138211|gb|ABO53954.1| Amidase [Burkholderia vietnamiensis G4] Length = 458 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 133/496 (26%), Positives = 210/496 (42%), Gaps = 57/496 (11%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRII 64 F +++ D L + ++ LVD ++ I + + Q + EV A AR AA+ D+ Sbjct: 7 FPPLAQLADDLAAGRTTSRALVDIALERIADPSGQGAVVFTEVDADHARTAADAHDRLRA 66 Query: 65 NGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA-VMLGKL 122 G L GIP+ +KD F G T+A S +LDG P V++G+ Sbjct: 67 AGTVLSPLAGIPVSVKDLFDVAGQVTRAGSRVLDGAPPAQADAAAVARLRRAGAVLVGRT 126 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NM EFA ++G SP+R D GGSS G++A+VA + A ++GTDTGG Sbjct: 127 NMSEFAFSGLGLNPHFGTPRSPYRRDVPGDARIAGGSSSGAAASVADGMAAVALGTDTGG 186 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 187 SIRIPAALCGLTGFKPTASRIPTGGAVPLSTTLDSFGPIGLTVACCALVDRVLAGLE--- 243 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P A + ++G+ +G+ Y D + + + L+ AGA + ++ Sbjct: 244 --------PHVPAA--RPLEGVRLGVLTNYVTDGVDADVAAALDASLKHLEAAGAIVSDV 293 Query: 303 SLPHTQYALPAY--YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 P LP + SP EA Y + +L + + + V Sbjct: 294 RFPALD-TLPDVNRFGFSPIEA-----------YAWH---RPLLAQHRDR----YDPRVL 334 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKI----RTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 RI+ G ++ D RA + RT+ R D ++ PT P + Sbjct: 335 ARILKGEPASAADYLDLLAARAAMLDEAARTVWSR---------FDALVAPTVPIVPPRI 385 Query: 417 GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREET 472 E + + H V A N A+S+P C+ + P+GL L P R++ Sbjct: 386 ADLEADDAAFAHTNALVLRNPAAFNFLDACALSLP---CQPRGAAPVGLMLAAAPHRDDA 442 Query: 473 LFSVGQIIEKEAGYFR 488 L ++GQ +E R Sbjct: 443 LLAIGQAVEAVLNTIR 458 >gi|94968712|ref|YP_590760.1| amidase [Candidatus Koribacter versatilis Ellin345] gi|94550762|gb|ABF40686.1| Amidase [Candidatus Koribacter versatilis Ellin345] Length = 466 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 131/494 (26%), Positives = 212/494 (42%), Gaps = 80/494 (16%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 S +ELV+ +I IE N ++NA ++ ++ RA A R ++ L G+P+ +K Sbjct: 22 SPLELVEEHIHQIERLNPKLNALVDFDPERVRAQA-----RKVSAHEGPLAGLPVTVKSS 76 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 A G + S P ++TV ++ GAV+LG N E M YG Sbjct: 77 IAVAGHKCELGSGFYRNNIPSEDATVVARMRAAGAVILGTTNAPELLMSYETANDLYGRT 136 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 ++PW +++ GGSSGG SAA+A + AA +G+D+GGS+RQPA TG +KPT G Sbjct: 137 LNPWNI-----EYSAGGSSGGESAAIAAGMSAAGLGSDSGGSVRQPAHATGICALKPTPG 191 Query: 202 RCSRLGII-----SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 R G I FA +L G + RT++D ++L ++G D D +P+ Sbjct: 192 RIPATGHIPACLGPFA-TLGAIGPMARTMQDVSLLFSVLSGQDLDDPASAPVPL------ 244 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 +P+I + Q I + +D G IV ++ P T++A+ Sbjct: 245 --------------------CTPSITELKQIPIGYFEDDG--IVPVT-PETRFAI----- 276 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF------GQEVKHRIMIGTYVL 370 +++ + R R G RVE + E R I + G I+ G Y Sbjct: 277 ----QSAVDALR----RAGFRVEPFRPRTL-EAARKIWWTFFVRCGFAFDEAIIQGRYEK 327 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQG-------------VDVILTPTTPTSAFPLG 417 S + A+ L ++ A+ +G V L P AF Sbjct: 328 LSPTFKDFMATAQAEPPLESKELLFAWAEGDMIRAKMLAEMRDYPVWLCPVCAIPAFRHD 387 Query: 418 KEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + E Y D + N G PA VP + +P+G+Q+ +P+ +E + Sbjct: 388 EREWIVEGKTVQYLDAMRYMQWFNTFGAPAAVVPVGASPEGLPIGVQIAARPYADEIVLG 447 Query: 476 VGQIIEKEAGYFRP 489 + ++I++E GY P Sbjct: 448 IAEVIDREFGYRVP 461 >gi|255946904|ref|XP_002564219.1| Pc22g01750 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591236|emb|CAP97463.1| Pc22g01750 [Penicillium chrysogenum Wisconsin 54-1255] Length = 499 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 106/316 (33%), Positives = 164/316 (51%), Gaps = 25/316 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 ++ ++L +Y++ E NS + A +E+ + A + D+R NG R L G+PI IK Sbjct: 1 MAILKLKAAYVKRNEEVNSTVRAVVEINPDAWKIARDLDDERK-NGILRGPLHGLPILIK 59 Query: 80 DCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS-- 136 + AT + T A S+ L +P +S + KL +GA++LGK N+ ++A S +S Sbjct: 60 NNIATDDKMQTNAGSYALMDAKPGSDSAIAAKLRKSGAIILGKTNLSQWANYRSGNSSNG 119 Query: 137 ---YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + G VI+ + + D P GSS GS A L A +GT+T GSI P +G Sbjct: 120 WSAWGGQVIA--AHVPNQD---PSGSSSGSGVAADLGLAYACLGTETSGSITSPGEKSGL 174 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---- 249 VGIKPT G SR +I + D G +TRTV D+A++L+AIAG D D + P Sbjct: 175 VGIKPTVGLTSRYLVIPISEHQDTIGPMTRTVEDAALVLQAIAGQDGHDNYTLAAPYKHQ 234 Query: 250 VPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTID--KTWQQGISWLKDAGAKIVEISLP 305 PDY + + ++G +GIP+ L+Y S ++ ++ L+DAGA IV+ Sbjct: 235 TPDYVKHCKMNGLKGKRIGIPRNVLDLNYDSSRAPYYAAFEAAVNVLRDAGATIVD---- 290 Query: 306 HTQYALPAYYIISPAE 321 + Y +I P+E Sbjct: 291 NANYTAYEEFIQDPSE 306 >gi|330938626|gb|EGH42193.1| amidase family protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 339 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 16/247 (6%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDKR 62 F + E + R+ + +++ LV +Q IE N +NA IE+ + AA+ +R Sbjct: 42 FESSVELQRRMSAGSLTSAGLVTDLLQRIEALNKNGPALNALIEINPDALQIAAQLDGER 101 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIPI IKD T + T A + + G +++ V Q+L + GA+++GK Sbjct: 102 SRGEKRGPLHGIPIVIKDNLDTADRMQTTAGALAMVGAPAPHDAFVVQRLREAGAIIIGK 161 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAAS 175 N+ E+A E V S W + P GSS GS+ A+A + Sbjct: 162 ANLSEWAHFRGYE------VPSGWSGRGGQTRHPYDLNADPLGSSSGSAVALAAGFSPLA 215 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GSI QPA+ +G VG++PT GR SR G+I + D G + RTV D+AILL A+ Sbjct: 216 VGTETNGSIIQPAATSGVVGLRPTLGRLSRTGMIPLSSRQDTPGPMARTVTDTAILLTAM 275 Query: 236 AGYDECD 242 +G D D Sbjct: 276 SGTDPLD 282 >gi|284042045|ref|YP_003392385.1| amidase [Conexibacter woesei DSM 14684] gi|283946266|gb|ADB49010.1| Amidase [Conexibacter woesei DSM 14684] Length = 477 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 130/491 (26%), Positives = 227/491 (46%), Gaps = 42/491 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +L + +E+ R + D+S VEL+++ I E ++NA+ + ++A A+A ++ Sbjct: 1 MRDLPLLTATEALVRFGAGDLSPVELMEAVIARAEALEPRINAFTDTYYEEAIASARAAE 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G AR LEG+P+ +K G + + S + + Q++ D G ++ Sbjct: 61 ARWAAGTARPLEGLPVAVKCSTPIAGQPSTSSSLVFAERIAEVTAPAVQRILDAGGIVHA 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + + EF + YG +PW + D+ +PGGSSGG+ AA+A + G+D Sbjct: 121 RTSSPEFGCAPFTHSKLYGVTRNPW----NLDR-SPGGSSGGAGAALAAGTTLLADGSDI 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PAS G +G KP +GR LG ++ G + RTV D+A+L + +AG Sbjct: 176 GGSIRIPASSCGVIGYKPPHGRVP-LGGVAGLDLYCHLGPLARTVEDTALLHEVMAGPHP 234 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D ++LP + RA + + VG+ ++ P + + + + L DAG ++V Sbjct: 235 WD--MLSLPPMEAPRAPFAEPRDLRVGLSVTLGGYHVEPEVAEATRAAAAALADAGVEVV 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYG--LRVEGKDILEMYENTRSIGFGQE 358 E + PA +++A + YG E +LE + + + Sbjct: 293 E---------------LDPAWDPADIALAAQIHYGALFAAELAPLLERRDELTP--YAVD 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 R M + Y+RA ++ F Q VDV+L PT P +AF +G+ Sbjct: 336 FIERTM-------PVAAEHGYVRALELAAAAHGALVALFAQ-VDVLLCPTLPITAFAVGE 387 Query: 419 EENNSG------SMGHIYNDVFTVAVNMAGL-PAISVPAALCEKKMPLGLQLIGQPFREE 471 + + +M + TV N+ P++SVP+ +P+GLQ++G+P E Sbjct: 388 DYVETPVTVGGVAMEDPLTGLTTVPFNVCSRHPSMSVPSGRGRDGVPIGLQIVGRPHDEL 447 Query: 472 TLFSVGQIIEK 482 ++F +E+ Sbjct: 448 SVFRTAAAVER 458 >gi|330813432|ref|YP_004357671.1| amidase [Candidatus Pelagibacter sp. IMCC9063] gi|327486527|gb|AEA80932.1| amidase [Candidatus Pelagibacter sp. IMCC9063] Length = 444 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 132/487 (27%), Positives = 207/487 (42%), Gaps = 54/487 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M ++ ++ +E +LR +IS+VE+ YI+ I + A+ + A E+D Sbjct: 1 MPDILSLSANELAAQLREGEISSVEVCSQYIERIGKFEKDVKAWSHFNKKLLLEKAAEAD 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I+G L G+PI +KD T + T+ + I +S V L GA+++ Sbjct: 61 EHRISGKPLGLLHGLPIAVKDIIGTLDMPTECGTTIRKKMTASQDSEVVNLLKVAGAIIM 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGT 178 GK E A P ++ + D K TPGGSS GS+AAVA ++ SIG+ Sbjct: 121 GKTETTELAY------------FHPGKTTNPHDYKRTPGGSSSGSAAAVAAYMTPLSIGS 168 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 T GS +PAS+ G VG KP+YG SR GI+ + LDQ GI ++V D A+L K + Sbjct: 169 QTNGSTIRPASYCGVVGYKPSYGLISRYGILKQSDKLDQVGIFGKSVEDVALLAKVLIKK 228 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + ++ E +D +G + +DK Q+ K Sbjct: 229 DLFDPSTIHYSA---EEMMDVCRKGPLFDPKFIFYKTKNWKNLDKESQESFEIFIKTFKK 285 Query: 299 IVEI-SLPHTQYALPAYY-IISPAEASSNLA-RYDGVRYGLRVEGKDILEMYENTRSIGF 355 +E+ P +P Y+ II + ++N Y + L E +E + + Sbjct: 286 NIEVFDTPSYFDDIPKYHKIIHETDMANNFQLYYKKYKKKLSKEMVSAIERGLKNSATEY 345 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + + R YDS + E FE V+ TP S+ Sbjct: 346 AEAID---------FMKRSYDS---------------YKEVFEDYHGVL----TPASSGV 377 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 K N+GS F+ GLP+IS+P + +PLG+QLIG + + Sbjct: 378 APKGLGNTGS------PEFSTVWTYLGLPSISLPLLTGKNDLPLGIQLIGDKYDDLRFLG 431 Query: 476 VGQIIEK 482 V +EK Sbjct: 432 VASWVEK 438 >gi|192291158|ref|YP_001991763.1| Amidase [Rhodopseudomonas palustris TIE-1] gi|192284907|gb|ACF01288.1| Amidase [Rhodopseudomonas palustris TIE-1] Length = 425 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 125/483 (25%), Positives = 213/483 (44%), Gaps = 72/483 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +AV + R +S + + S Q + + A+ + R E+ Sbjct: 5 LGLLAVHRA---FRDGTLSPADYIASCTQRADEVEPWLKAFCD------RLPGEQ----- 50 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + G L GIPIGIKD AT GI T S + P ++ + ++ G ++ GK Sbjct: 51 LTGGEGPLAGIPIGIKDIIATAGIRTTNGSRVYTDHVPDQDAPIVARIKQLGGIVFGKTV 110 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA GP ++P + + TPGGSS GS+AAVA + ++GT T GS Sbjct: 111 STEFAWRCP------GPTVNP-----NNPQHTPGGSSSGSAAAVAAGIVPMALGTQTVGS 159 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI-----AGY 238 + +PA++ G VG KP++G R G+ A SLD G +TR+V D+A + AG Sbjct: 160 VVRPAAYCGVVGFKPSFGAIVRDGVHPLAQSLDHVGFLTRSVEDAAFAFGLLADGADAGA 219 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 LPV + + +G+ + D +S ++ ++ + L+ GA Sbjct: 220 AAQAVAGDVLPV----------VSSLRLGVVRPPIWDRVSAEQNQAFETALETLRRGGAT 269 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV + LP + + + A+ A ++ GL + D+ + Sbjct: 270 IVPLELPERYWK--GFEVAEIILAAEAAAIFN----GLVTQHPDLTS-----------PQ 312 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 +K + G + + R Y+ AR+++ ++++F + G+D ILT P A P G Sbjct: 313 LKELVAAGNAISAPR-----YIEARQLQASLQQEFPQHVS-GLDGILTVPAPGEA-PEG- 364 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + + F M G+PA+++P A + +PLGLQ+IG + L + Sbjct: 365 -------LAYTGDASFCALWTMLGVPALTMPIARSARGLPLGLQVIGGFGEDAKLLRTAR 417 Query: 479 IIE 481 ++E Sbjct: 418 VVE 420 >gi|157691030|ref|YP_001485492.1| amidase [Bacillus pumilus SAFR-032] gi|157679788|gb|ABV60932.1| amidase [Bacillus pumilus SAFR-032] Length = 495 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 132/499 (26%), Positives = 217/499 (43%), Gaps = 69/499 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+K ++ ELV + + N ++NA + R + + ++ + + G+P Sbjct: 20 VRNKQVTPDELVQAAFARLNEVNPELNALTQT-----RQDQVVKEMKTLHTN-QPFAGVP 73 Query: 76 IGIKDCFATKGIHTQ---ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +K+ ++G+ + A + +L + +S Q+L G +M+G N EF + + Sbjct: 74 FVLKNI--SQGLENEPLTAGAALLKDVKAKTDSHFVQRLKQAGFLMVGHTNTPEFGLRNV 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E + +GP +PW ++PGGSSGG++AAVA + A +D GGSIR PASFTG Sbjct: 132 TEPALHGPTRNPWHP-----DYSPGGSSGGTAAAVASGIVPAGGASDGGGSIRIPASFTG 186 Query: 193 TVGIKPTYGRCSR---LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+KPT GR G S+D +T+TVRDSA LL + A L Sbjct: 187 LFGLKPTRGRTPVGPGAGRQWQGASID--FTLTKTVRDSAALLDLLQVIQPEAAFQTPLY 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y+ L + M + E + +S + QQ + WL D G + VE + P Sbjct: 245 AGSYQEDLVKRTSSMRIAYSVESPVGTKVSEEAKQAVQQTVKWLSDQGHQ-VEEAKPAID 303 Query: 309 --YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG-QEVKHRIMI 365 + + YY+++ E S+ + R G+ + E T + + E + Sbjct: 304 GIHLMQQYYVMNSGEMSALFMSLN------RSLGRPVNP--EETDIVAWVLAEAGKNVTA 355 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG-----KEE 420 Y S +D + A ++ +F Q D+ +TP T SA +G KEE Sbjct: 356 AAYTESLDAWD---MAAAQM---------ASFHQTYDLFVTPATAYSAPKVGELMHSKEE 403 Query: 421 ----------NNSGSMGHIYN--------DVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 + IY+ FT N+ G P++SVP L E MPLG+Q Sbjct: 404 ITQLLRVSSLSMQAQQDLIYDMFLKSLTYTPFTQLANLTGQPSMSVPVHLTEAGMPLGVQ 463 Query: 463 LIGQPFREETLFSVGQIIE 481 + +E+ L + +E Sbjct: 464 VTAPKGKEDWLLRLAAEME 482 >gi|288959572|ref|YP_003449913.1| amidase [Azospirillum sp. B510] gi|288911880|dbj|BAI73369.1| amidase [Azospirillum sp. B510] Length = 502 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 218/517 (42%), Gaps = 64/517 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + ++F + +E LR++ I AVE + +++ +E + +NA + + A AA E+D Sbjct: 12 TPIHFKSATEILKLLRTRQIGAVEALQHHLERVERLDGDLNAVVVKDVESALCAAREADN 71 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R + L G+P+ IK+ F G+ T L G RP ++ L GAV+ GK Sbjct: 72 RS-KTELPPLHGLPMTIKEAFDVAGMPTTCGFPHLAGNRPRQDAHAVGLLKAAGAVVFGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ A YG +PW + TPGGSSGGS+A++A +G+D G Sbjct: 131 TNVPVGAFDWQAYNPVYGSTNNPWNT-----GHTPGGSSGGSAASLAAGFSPLELGSDIG 185 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAP------SLDQAGIITRTVRDSAILLKAI 235 GSIR PA F G G +P+YG G + P G + R+ +D + L I Sbjct: 186 GSIRVPAHFCGVYGHRPSYGLVPAHGHVPPMPGTLIRYEFGVNGPLARSAQDLELALDLI 245 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E + L +P Q + Y +D +++ + L+ Sbjct: 246 VAPAELERPASRLAIPASRHERLQDFRVAVWADDSAYAVDTRCLDAMRSY---VDDLRKL 302 Query: 296 GAKIVEISLPHTQYALPA--YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G + E + P + A Y+ I + +S++ +IL+M +T + Sbjct: 303 GVTVDEKARPDYDWKASADLYFDIIMSICASSMP-------------PEILKMLADT-AA 348 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G E + VL R ++ Y R R ++ R + + F DV++ P+ PT A Sbjct: 349 GLPPEDSGYLARMGRVLQMRHHE--YYRIMHEREVLYRAWRD-FYSRYDVLICPSFPTVA 405 Query: 414 FPLGKEENNSGSMGHIYNDVFTVA------VN-----------------MAGLPAISVPA 450 + E + G G +D FTV VN +A LPA +VP Sbjct: 406 Y----EHDRRGDGG---SDPFTVGESRSHMVNGRPIPYWDGLHWPSMAVVANLPATAVPT 458 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 +P+G+Q++G + T Q++E+E G F Sbjct: 459 GRFIDGLPMGVQIMGPYCEDRTPLRFAQLVERELGGF 495 >gi|238024802|ref|YP_002909034.1| amidase [Burkholderia glumae BGR1] gi|237879467|gb|ACR31799.1| Amidase family protein [Burkholderia glumae BGR1] Length = 495 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 128/486 (26%), Positives = 213/486 (43%), Gaps = 48/486 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA----AEESDKRIINGDARD- 70 +RS+ +S VE + +Y+ IE N ++NA +VA + RA A D + G+ + Sbjct: 33 IRSRAVSCVETMRAYLDRIEQVNGRVNA---IVALRERAVLLAEAARKDAALARGEWQGW 89 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P KD TK I T S I FRP ++ ++ GA+ +GK N EF +G Sbjct: 90 LHGMPQAPKDLAMTKDIVTTLGSPIFRDFRPAEDTLGVARMRAAGAIFVGKTNTPEFGLG 149 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + YG +P+ S SSGG++AA+A + + G+D GGS+R PA+F Sbjct: 150 SHTFNAVYGATRNPYDLAKSAGG-----SSGGAAAALAARMLPVADGSDFGGSLRNPAAF 204 Query: 191 TGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G++P+ GR R + F G + RTV D A LL AG+D D + Sbjct: 205 CNVFGLRPSAGRVPRWPVPDVFYQQFGVEGPMGRTVADVAQLLAIQAGHDPRDPLSFDDD 264 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + + LD +G + ++R + P + ++ + L+ G + V+ +LP + Sbjct: 265 PARFTQPLDADPRGKRIAWVGDWRGHLAIEPGVLALGERALDTLRTLGCE-VDAALPDFE 323 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIGT 367 A I A +L + G +L +Y + R E + Sbjct: 324 PA----RIWQIWLAHRHL-----------MSGGSLLALYRDPARRALLKPEAVFEVEGLL 368 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 + + + Y++ R+ + + FE+ D + PT FP E S+ Sbjct: 369 AMTADQVYEASVARSAWYQAALA-----MFER-YDFLAAPT--AQVFPFDVEARWPASIA 420 Query: 428 -------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 H + + T +AGLP I+VPA E +P G+QLIG+P + L + Sbjct: 421 GRAMDSYHRWMETVT-PWTLAGLPVINVPAGFNEAGLPTGIQLIGRPRDDFGLLQLAHAY 479 Query: 481 EKEAGY 486 ++ + + Sbjct: 480 QQASDW 485 >gi|182678286|ref|YP_001832432.1| amidase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634169|gb|ACB94943.1| Amidase [Beijerinckia indica subsp. indica ATCC 9039] Length = 477 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 136/501 (27%), Positives = 222/501 (44%), Gaps = 56/501 (11%) Query: 10 SESRDRLR---SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 S++ D+LR ++ +SA EL+D + + + ++NA + +A A+ D R Sbjct: 6 SDAVDQLRMLSTRQLSARELLDMVVARTDRLSERVNAVVARDLDRAYHDAQLIDDRRARS 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +KD F G+ A IL R ++ V + A++ G+ N Sbjct: 66 EPMGRLAGIPMTVKDTFDIDGLPASAGLRILLN-RKAKDAIVVSRARAEDAIIWGQTNTP 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 A + YG +PW + TPGGSSGGS+AA+A L A IG D GGS+R Sbjct: 125 TKAADWQTYNALYGTTNNPWNL-----ERTPGGSSGGSAAALAAGLTALEIGADAGGSLR 179 Query: 186 QPASFTGTVGIKPTYGRCSRLGII---SFAPSLDQA--GIITRTVRDSAILLKAIAGYDE 240 PA+F G KPTYG S+ G++ +FA +D A G + R+ RD +L+ I+ + Sbjct: 180 VPANFCGVFAHKPTYGLISQRGLVPPPNFAADVDLAVVGPMARSSRDLRLLMSVIS---D 236 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + PVP I+G+ V + LD + +D + I+ + A Sbjct: 237 LPLSAEAPPVP---------IKGLKVAL----WLDEPAFVLDADVRHRITVFAETLAANG 283 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRY-----GLRVEGKDILEMYENTRSIGF 355 I P + SP EA + + Y + Y G+ + + + E+ I Sbjct: 284 AIVEP----------VRSPIEADTLMFTYTMLLYPLSNAGMPAQERTLYELLRGPAKIAL 333 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 K + VL+S +LRA ++R ++ F DV+L+P +P AFP Sbjct: 334 ALGAKP-LSWAQGVLASTARHREWLRANEMRAGMQHTLQRFFTH-YDVLLSPISPMPAFP 391 Query: 416 LGKE----ENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 GS G ++ + + GLPA ++P L + +P+G QLIG Sbjct: 392 HDHRPFLRRRLRGSDGRTFSYLELLNWIALATTCGLPATALPIGLTSQNLPVGAQLIGPR 451 Query: 468 FREETLFSVGQIIEKEAGYFR 488 + ++ Q +E+ G F+ Sbjct: 452 NSDARTLAIAQAMEEMIGGFQ 472 >gi|83816770|ref|YP_445774.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Salinibacter ruber DSM 13855] gi|83758164|gb|ABC46277.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Salinibacter ruber DSM 13855] Length = 596 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 223/504 (44%), Gaps = 82/504 (16%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL F ++SE LR++ +++VEL + +Q + + +++A I ++A AAA +D Sbjct: 151 ELAFASISELAHLLRARKVTSVELTELALQRLRRYDDRLHAVISYTEERALAAARRADDE 210 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G R L G+P G KD A +G T + +TV ++L D GAV++ K Sbjct: 211 LDAGTWRGPLHGVPYGAKDLLAVQGTKTTWGAEPYKTQTIDETATVIERLDDAGAVLVAK 270 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L++ A G + Y +PW ++D GSS G +AAV+ +IG++T Sbjct: 271 LSLGALAWG---DVWYDATTKNPW-NLDQGSS----GSSAGPAAAVSAGCVPFAIGSETL 322 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P++ G G +PT+G R G ++ + ++D+ G I R+ D A + AI G D Sbjct: 323 GSIVSPSTRCGVTGHRPTFGAVGRGGAMALSWTMDKLGPIARSALDCAHVYDAIRGADPK 382 Query: 242 DATCVNLPVP-DYERALDQSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D V++P P D ER S + VG +E + DY + + D Q+ + L+ G + Sbjct: 383 DPASVDVPFPFDAER----SAVSLRVGYLQEAFEGDYDNQSAD---QKTLDVLRGLGVDL 435 Query: 300 VEIS--LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-----RS 352 +S + AL + A A L R DGV +++ ENT R+ Sbjct: 436 EPVSWDVDVPVGALLNTLDVEAAAAFDELTRTDGV--------DELVRQGENTWPNVFRT 487 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT-LIKRDFTEAFEQGVDVILTPTTPT 411 F V+H M ++R L++R A Q +DV+++P+ Sbjct: 488 ARFVPAVEHVQM------------------DRLRVDLMER--AHAVMQDLDVLVSPSF-- 525 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-------KKMPLGLQLI 464 G++G N+ G P + +P AL ++ P + + Sbjct: 526 ----------GGGTLG---------ITNLTGHPCVCLPNALRPVEEGPDARRQPGSISFV 566 Query: 465 GQPFREETLFSVGQIIEKEAGYFR 488 +R++ ++ +++ R Sbjct: 567 APLYRDQHALTLAHAVQQATDIHR 590 >gi|39934804|ref|NP_947080.1| putative amidotransferase subunit A [Rhodopseudomonas palustris CGA009] gi|39648654|emb|CAE27175.1| putative amidotransferase, subunit A [Rhodopseudomonas palustris CGA009] Length = 477 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 111/461 (24%), Positives = 193/461 (41%), Gaps = 35/461 (7%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D+L+S +++ +E++D + I + +NA + +AR A E K+ + L G Sbjct: 17 DKLKSGEVTPIEVLDVLEERIAEVDGAINALPTLCFDRARGHAAELMKKP-PAERGLLAG 75 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD A G+ T S I P + + L NG V+ K N EF G++ Sbjct: 76 LPVPIKDLTAVAGVLTTQGSPIYKDNVPARSDLMVEHLEGNGGVVYAKSNTPEFGAGANT 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +PW S G + + A+ +L + G+D GGS+R PASF G Sbjct: 136 FNEVFGATRNPWDL--SRSAAGSSGGAAAALASGTAWL---AHGSDMGGSLRNPASFCGI 190 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG++P++GR + +L G + R V D A+LL A++G D + P + Sbjct: 191 VGLRPSFGRVAHTPAAKIDRNLGVQGPMARNVEDVALLLDAMSGEYAADPLSIPSPATSF 250 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A + + V + + + P + ++ +AG IVE + P A Sbjct: 251 LAAARSRQKPLRVAYSPDLGITPVDPEVAAVTRKAAERFAEAGV-IVEQAQPDLSEA--- 306 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 E L +D + D+L + ++ + + L+ Sbjct: 307 ------HECFQALRAFD-----FAISKADLLRTKRDLLKPEVIWNIEQGLKLSVDDLAKA 355 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE---ENNSGSMGHIY 430 + AR I F + D++L P T T+ FP+ + E N + G+ Sbjct: 356 EAQRVAMTARTIE----------FFKTYDLLLCPATITAPFPVEQRYLAECNGHTFGNYV 405 Query: 431 NDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + V A+ + PA+S+P +P+GLQ++ +P E Sbjct: 406 EWLGIVYAITLVCCPALSLPCGFTATGLPIGLQMVARPRNE 446 >gi|146305739|ref|YP_001186204.1| amidase [Pseudomonas mendocina ymp] gi|145573940|gb|ABP83472.1| Amidase [Pseudomonas mendocina ymp] Length = 604 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 134/482 (27%), Positives = 204/482 (42%), Gaps = 87/482 (18%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 R LR+ D + + L S +Q+NA ++ +A + AA + K L Sbjct: 36 RLELRTDDSAWIALA---------SEAQLNAQLDALASALQDAAGDLSKL-------PLY 79 Query: 73 GIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P IKD G T AC + +++V +L GA+++GK N+D+FA G Sbjct: 80 GVPFAIKDNIDAAGWPTTAACPEF--AYGAETDASVVARLRAAGAILIGKTNLDQFATGL 137 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF----LCAASIGTDTGGSIRQP 187 S YG V + F P SGGSS+ A L S+GTDT GS R P Sbjct: 138 VGTRSPYGAV---------PNSFNPDYVSGGSSSGSASVVARGLVPFSLGTDTAGSGRVP 188 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A F VG+KPT G G++ S+D + TV D+ + GYD DA Sbjct: 189 AGFNNIVGLKPTKGWLPNTGLVPACRSIDCISVFALTVADALTVANIAGGYDAADA---- 244 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRL------DYLSPTIDK-TWQQGISWLKDAGAKIV 300 Y R S + VG+P + RL ++ + ++ ++ + L++ GA++V Sbjct: 245 -----YSRKNPNSAK---VGMPAQPRLAVPANPEFFGDSQNQVVYEAALGQLRELGAELV 296 Query: 301 EISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 EI P Q A YY P A +A VEG D + R I Sbjct: 297 EIDFAPFQQLAEQLYY--GPWVAERTVA----------VEGVDPAHINPVVRGI------ 338 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + G + Y + Y+RA + R +A G D ++ PT+PT + Sbjct: 339 ---VENGHQYSACDAYKAEYIRAE-----LSRRINDALA-GFDALVVPTSPTI-----RT 384 Query: 420 ENNSGSMGHIYNDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + ++N F T N+A L A++VPA L +P G+ LI + ++ L + Sbjct: 385 LAEMQAEPVLFNSQFGTYTNFTNLADLCALAVPAGLRADGLPAGITLIAPAWHDQALAAF 444 Query: 477 GQ 478 GQ Sbjct: 445 GQ 446 >gi|302548477|ref|ZP_07300819.1| amidase [Streptomyces hygroscopicus ATCC 53653] gi|302466095|gb|EFL29188.1| amidase [Streptomyces himastatinicus ATCC 53653] Length = 483 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 131/490 (26%), Positives = 211/490 (43%), Gaps = 43/490 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 ++++ EL D I IE + +NA +ARAAA +D+ G+ R L GIP+ +K Sbjct: 19 EVTSAELTDEAIARIERDDKVLNAICVPDFDRARAAARGADQARARGEVRPLLGIPVTVK 78 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 + + G+ T + P ++ +L GAV+LGK N+ + YG Sbjct: 79 ESYNMAGLPTTWGMPQHRDYVPAEDAVQVSRLKAAGAVVLGKTNVPLGLQDIQSFNEIYG 138 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW D+ + G S G ++A +GF CA SIG+D GS+R PA F G KPT Sbjct: 139 TTNNPW----DHDRTSGGSSGGSAAALASGF-CALSIGSDLAGSLRTPAHFCGIYAHKPT 193 Query: 200 YGRCSRLGI-------ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVNLP 249 G + G+ + L G + RT RD +LL +AG D A V LP Sbjct: 194 LGLAATRGMVAPPAPPLPVDLDLAVVGPMARTARDLTLLLDIMAGPDPLTHGVAYDVTLP 253 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +ER D V + ++ L + + L D GA+ VE P Sbjct: 254 PARHERLGD-----FRVLVVDDHPLIPTGSAVRAGVNRVADALADGGAR-VERHTPLLPD 307 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A + + S ++AR+ +E YE R+ + + + Sbjct: 308 LAEAGTLYTQLLVSGSVARFP-------------IEAYEQMRARAAALSADDQSLDAARL 354 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN------NS 423 + ++ R L + + + F + D ++ P TPT+AFP N + Sbjct: 355 RAMVFSHRDWMEVNSRRELHRHGWRQLFAE-FDAVVCPITPTAAFPHDHNPNPLERRIDI 413 Query: 424 GSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + Y D V+ M GLPA +VPA + +P+G+QLIG F + T + +++E Sbjct: 414 DGVEYPYFDQLVWAGLATMPGLPATAVPAGRSPEGLPVGVQLIGPMFEDRTPLRLAELLE 473 Query: 482 KEAGYFRPHK 491 ++ G F+ K Sbjct: 474 QKIGGFQAPK 483 >gi|126463929|ref|YP_001045042.1| amidase [Rhodobacter sphaeroides ATCC 17029] gi|126105740|gb|ABN78270.1| Amidase [Rhodobacter sphaeroides ATCC 17029] Length = 490 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 133/503 (26%), Positives = 214/503 (42%), Gaps = 62/503 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L +++ ++ R++ IS VE+V + IE S +NA ++A A S+K Sbjct: 17 TPLAYLSAAQLTALYRARKISPVEVVTDALARIEASGDSLNAVCFTYPEEALEEARASEK 76 Query: 62 RIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R ++G + ++GIP +KD G T S + + V Q+L + GAV+ Sbjct: 77 RYMSGAQKPGMIDGIPTALKDETMMAGKVTTYGSLLYADHVAAKSAPVVQRLVEAGAVIH 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + EF+ + +G +PW FTPGGSSGGS AA+A L + G+D Sbjct: 137 ARTTTPEFSCAPFCHSRQWGVTRNPWNL-----AFTPGGSSGGSGAALAAGLAPLATGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS +G VG KP YGR + P + G + RTV D ++ +AG Sbjct: 192 IGGSIRIPASASGVVGFKPPYGRVPSTPPFNLDP-YNHPGPMARTVEDCLLMQNVLAGPH 250 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + P E LD+S ++G + ++ + P + + + GA+ Sbjct: 251 PEDIASLK---PKLELRLDRSGVKGWKIAYSLDFGFMEIDPAVRANTLAALDVFRALGAE 307 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVR------YGLRVEGKDILEMYENTRS 352 + E++LP + A A + LA Y R Y R +D L TR Sbjct: 308 VTEVALPWSWEVYRAAATHHKALFGAWLAEYLDEREERLTSYARRF-ARDALAT--TTRD 364 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G E++ RI SH+ +G D+ L PT Sbjct: 365 YLAGMEIEGRIW------------SHF---------------GPMMEGFDLFLCPTLAIP 397 Query: 413 AFP----------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 A P + EE +S +G F + ++ P +SVP+ +P G+Q Sbjct: 398 AVPAEFDFSDPLIINGEEIDS-YLGWTMAWPFNM---LSRCPVLSVPSGHAPNGVPTGIQ 453 Query: 463 LIGQPFREETLFSVGQIIEKEAG 485 L+G+ + ++++F+ G E G Sbjct: 454 LVGRTYEDQSVFTAGLAYETALG 476 >gi|295097233|emb|CBK86323.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 456 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 118/453 (26%), Positives = 193/453 (42%), Gaps = 54/453 (11%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +NA + V A + +R L G+P+ +KD A + L Sbjct: 27 LNAILGVNPDAMSQAEQHQQQRRRGEPIGPLHGVPLIVKDNIACAPMPITLGCRALASLN 86 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 ++ V Q+L GA++L + NM EFA + +S G V +P T GGSS Sbjct: 87 ATADARVVQRLRRAGAIILARANMSEFAFDVRSRSSLGGDVANPL-----CPTLTAGGSS 141 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GG +AAVA + ++GTDTGGSIR P S+TG VG++P + R G+ +PS D G Sbjct: 142 GGCAAAVAAGMADGALGTDTGGSIRIPCSYTGLVGLRPAFRRSQLDGVAPLSPSKDTVGP 201 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 + +V D+A+L I G V LPV R+L G+ + E + Sbjct: 202 MVHSVEDAALLHAVIHGLPP-----VALPV----RSLKGVRFGVVTALQGEDEVQL---- 248 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 + WQ + L+ AGA +VE+SLP + ++ L+ Y+ RV Sbjct: 249 --EVWQSALHTLRRAGATLVEVSLP----------FLEEVRQATCLSLYE-----FRVAI 291 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTY------VLSSRCYDSH-YLRARKIRTLIKRDF 393 D L S G V + + +L+S + +L R+ + L++++ Sbjct: 292 DDWLSKQPGAPS-GLTSIVDSGAFLPEFAPFLRQMLASNTLKTPLWLAGRRFQRLLRQNL 350 Query: 394 TEAFE-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL 452 + E Q +D + PT + SM + ++GLPAI++P + Sbjct: 351 CQVAEVQRIDGFVYPTV----------QRLPESMAKMPPGCAPELAAISGLPAITLPCGV 400 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +P+G++++ E L ++ E G Sbjct: 401 SRIGLPVGMEMLSAQEDETMLMTLALACEGALG 433 >gi|126653125|ref|ZP_01725254.1| putative amidase [Bacillus sp. B14905] gi|126590130|gb|EAZ84255.1| putative amidase [Bacillus sp. B14905] Length = 487 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 222/489 (45%), Gaps = 59/489 (12%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + ++SK+++ EL + ++ I+ N +NA + V+ ++A A E+ DK G Sbjct: 16 ELVKSKEVTPQELKNLALEGIKKVNPSINAVVSVLEEQADKAIEKVDKN------APFAG 69 Query: 74 IPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P IK+ +G+ S I + +S + + G ++ G EF ++ Sbjct: 70 VPFLIKELVLHAEGVPHSMGSRIGENTVIPVDSELMARFRKAGFILAGTTTTPEFGYNAA 129 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E YG +PW ++D + + GGS+ ++ + A D GGSIR PAS +G Sbjct: 130 TEAVIYGATRNPW-NLDHSPGGSSGGSAAAVASGIVPIAHA----NDGGGSIRIPASCSG 184 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLP 249 VG+KPT GR G + P L+ I +TRT+RD+A+LL +AG D + + + Sbjct: 185 LVGLKPTRGRVPT-GPFNSEP-LNGIAIEFAVTRTIRDAAVLLDQVAGPDVGSYSKLEVT 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y + + ++++ + + E ++ P + + + LKD G ++VE Sbjct: 243 HAPYGQLIHENVRPLKIAWTTETNSGAFVDPECIEAVHKTVQVLKDLGHEVVE------- 295 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK-HRIMIGT 367 A P Y +A+ A D + +I +M + G G+ V I Sbjct: 296 -ARPKY-----EQATFTKATVD-------IWTANIYKMIKGAAE-GAGKAVSPDNIEAAI 341 Query: 368 YVLSSRCYD-------SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + +CY+ S L A I L+ R FE D++L+PT T +G+ Sbjct: 342 W----KCYEYGGNLKASELLDAININALVSRQVAGFFED-YDILLSPTIGTLPAKIGELN 396 Query: 421 NNSGSMGHI--YNDVFTVA-----VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 N+ ++ + +FT A N G P++S+P A + +P+GLQ+ G+ E TL Sbjct: 397 ANNPNISAVEWTEQIFTYAPFTNLFNATGQPSLSLPLAESQSGLPIGLQMTGKFADELTL 456 Query: 474 FSVGQIIEK 482 +G+ +E+ Sbjct: 457 LQLGRQLEE 465 >gi|255293097|dbj|BAH90190.1| putative amidase [uncultured bacterium] Length = 407 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 12/310 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++ + + +E R+R+K +S VE++D I IE N +NA I ARA A++++ Sbjct: 1 MNDFAYTSATELARRIRTKAVSPVEVMDETIARIEQRNPSLNALIFTDFDGARAGAKQAE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKG--IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ G D L G+P IKD F K T L + +++ GA+ Sbjct: 61 AAVMAGADLPPLHGVPAAIKDLFDFKPGWPTTYGGVRALKDNIAQFHCVFAERVERGGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK N + + +G +P+ D+T PGGSSGGS+AAVA L + G Sbjct: 121 LVGKTNAPVMGLRGVTDNYLFGATSNPF---DTTR--NPGGSSGGSAAAVADGLLPFAEG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCS-RLGIISFAPSLDQA--GIITRTVRDSAILLKA 234 TD GGSIR PA++ G G K ++GR + +FA L G ITRTV D+A+ + Sbjct: 176 TDAGGSIRIPAAWCGVFGYKASFGRVPVVIRPNAFAGDLPYVFEGPITRTVEDAALAMSV 235 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + GYD D ++ V DY A +SI+GM + + + P + +T ++ + + Sbjct: 236 LDGYDPRDPLSLDEKV-DYLGATKRSIKGMRIAYSPNLDVYPIDPRVAETVKRAVEAFAE 294 Query: 295 AGAKIVEISL 304 AGA + E+ + Sbjct: 295 AGAIVEEVKV 304 >gi|222110821|ref|YP_002553085.1| amidase [Acidovorax ebreus TPSY] gi|221730265|gb|ACM33085.1| Amidase [Acidovorax ebreus TPSY] Length = 516 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 132/483 (27%), Positives = 220/483 (45%), Gaps = 39/483 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E R R+ + ++S VEL+ + I IE N +NA +ARA A+ +++ + G Sbjct: 10 LSANELRHRIGTGELSPVELLQACIDRIEAVNPYVNAVTATCYDRARAEAQAAERAVRAG 69 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+G+KD AT G+ T S I P ++ + +L GA++ GK N+ Sbjct: 70 EPLGLLHGLPMGVKDLEATAGLLTTYGSPIYRENIPAQDNVLVARLRAAGAIVTGKTNIP 129 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G+++ +G +P+ + GGSSGGS+AA+A + G+DTGGS+R Sbjct: 130 EMGAGANSRNVVWGATGNPF-----DPRLNAGGSSGGSAAALACDMLPVCTGSDTGGSLR 184 Query: 186 QPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA+ G VG +P+ G S ++ + P + G + RT+ ++ + L A AG D Sbjct: 185 IPAAKCGVVGFRPSPGVVPSSRKLLGWTP-ISVVGPMGRTMAEACLQLAASAGLSAGDPL 243 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L + + G+ VG +++ + I ++ I ++ EI L Sbjct: 244 TYPLDPHSFLHLEPADLGGLRVGYTEDFGACAVDDGIRAVFRAKIGAMRHLFRSCEEIRL 303 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-NTRSIGFGQEVKHRI 363 + ++ R + G+R E YE + S+G + + Sbjct: 304 D-----------LGDVHRCFDVLRAESFLAGMR-------EAYERDPASLGPNTRANYEM 345 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEE 420 +L DS + +A + R L + F EAF DVIL PTTP S FP L Sbjct: 346 GAAMSLL-----DSAWAQAEQTRILAR--FQEAFAN-FDVILAPTTPVSPFPWTALYASH 397 Query: 421 NNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 N + Y + T + PA+SVP MP GLQ++G+ + L S+G Sbjct: 398 INGEPQANYYRWLALTYVTTLTTHPALSVPCGRDTAGMPFGLQVVGRFRDDHRLLSIGLG 457 Query: 480 IEK 482 +E+ Sbjct: 458 LEQ 460 >gi|300021824|ref|YP_003754435.1| amidase [Hyphomicrobium denitrificans ATCC 51888] gi|299523645|gb|ADJ22114.1| Amidase [Hyphomicrobium denitrificans ATCC 51888] Length = 446 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 133/487 (27%), Positives = 216/487 (44%), Gaps = 69/487 (14%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDA 68 SE++ L S +++ LV S + I + ++ + A+ V AQ+A AA SDK R Sbjct: 12 SEAKRLLDSGQLTSEALVSSCLARISDRDAAVGAWTTVNAQRALEAARASDKLRATGASL 71 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+GIKD TK T+ S + G +P ++ + +L GA++LGK E A Sbjct: 72 PPLSGIPVGIKDVIDTKDFPTEYGSEVFAGRQPDTDAVLVMQLKAAGAIILGKTVTTELA 131 Query: 129 MGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++GP ++ + D + TPGGSS GS+AAVA ++GT T GS +P Sbjct: 132 --------FFGP----GKTRNPHDPERTPGGSSSGSAAAVADGQVPLALGTQTAGSTIRP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS+ G +G KPT+G SR G+++ + LD G R++ D A+L A++ +D D Sbjct: 180 ASYCGVIGFKPTFGYTSRTGVLAQSAPLDTIGGYARSIEDIALLFDAMSAFDAADTDMQA 239 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKD------AGAKIV 300 P AL + P+ R ++ +P + + +D A A+IV Sbjct: 240 GEKPSLVAALAEP-------GPRVPRFAFIKTPAWPQAEPATRAAFEDFAGSFGARAEIV 292 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E LP ++G+ LR+ I++ Y+ R+ G + Sbjct: 293 ETILPP---------------------EFEGI---LRL--PQIVQFYDIARNYGPIADAN 326 Query: 361 HRIMIGTY---VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 M G + R + S A + + + D ILTP A Sbjct: 327 PDRMSGKLKEIIAEGRTFSSADYAAARADQDSLYEILKPVIADYDAILTPAATGPAL--- 383 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLFSV 476 SG+ ++N ++T G+P IS+P L E +P+G+QL+G + L V Sbjct: 384 --VGLSGTGSPMFNALWT----YLGMPCISLP--LLEIDGLPVGVQLVGARGNDAHLLRV 435 Query: 477 GQIIEKE 483 + ++ Sbjct: 436 ADWMMRQ 442 >gi|313221273|emb|CBY43728.1| unnamed protein product [Oikopleura dioica] Length = 637 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 116/471 (24%), Positives = 207/471 (43%), Gaps = 41/471 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E + E R+ ++ +++ + I+ I+ +N + + + A ES + Sbjct: 159 NEFRYRRAFEYVQAYRNSQLTPLDVAERIIETIKITNPSLKMLCDWHPEMILEQARESTE 218 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R I+G L+G +KD + G ++ ++ VT K+ D G +++G Sbjct: 219 RYISGKILSPLDGTFCVVKDQISVAGHCNRSGLSFINKIEDEDAPLVT-KVRDAGIIIVG 277 Query: 121 KLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 NM E M +N +SY+G +P +TD + PGGSS G++AA+ L IGT Sbjct: 278 ISNMTELGMSVFGANPSSYHGTCRNP----INTD-YYPGGSSSGTAAAICSGLVPFGIGT 332 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGII---SFAPSLDQAGIITRTVRDSAILLKAI 235 D GGSIR P+ TG VG+K T+ R S + ++ G + + D A+ + + Sbjct: 333 DGGGSIRMPSCQTGIVGLKTTFSRVSANSYAKAKTCCSTVANIGPMASNIIDLALFYQVL 392 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKD 294 AG DA + P + L + G+ +G+ +++ LS P + +++ I +L + Sbjct: 393 AGPIRGDAFSMAQPKVKVPKELTPYLDGIKIGV--DWKWAELSRPEVFINFKKKIEYLAE 450 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA+I+ + +P + + I +E S + E R I Sbjct: 451 RGARIIGVDIPELDFISTGHLISIVSEGSEAIG-----------------EALNKQRKIA 493 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-TSA 413 ++I LS C S + A K RT + + + + +DV+ PT T+ Sbjct: 494 -----PDNVVILNAGLSC-CMASDFTLAAKYRTRL-MTYLKGLFKTIDVLANPTCAQTAE 546 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQL 463 L +EN S G + V + N +G+P++SVP+ +P G+ L Sbjct: 547 RILDGDENGSWKFGATLRYMMYVKLSNYSGIPSMSVPSGFAPNGLPTGIML 597 >gi|86138539|ref|ZP_01057112.1| amidase [Roseobacter sp. MED193] gi|85824599|gb|EAQ44801.1| amidase [Roseobacter sp. MED193] Length = 476 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 132/513 (25%), Positives = 211/513 (41%), Gaps = 68/513 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ ++ +E R+ DISA V + + + N Q+NA +E ++ +A + A + DK Sbjct: 5 EIWRLSATELSPLTRAGDISAETAVQASLNRMTEVNPQLNAVVEDLSAEAVSRARDLDKA 64 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G A L+G+P+ IK +G T L ++ V L GAV++G+ Sbjct: 65 RAAGAAPGPLQGLPVTIKINVDQEGHATSNGVTALKDLIAPADAPVVANLQKAGAVVIGR 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF+ + + +G +PW +PGGSSGG+ A+V + A + G D G Sbjct: 125 TNTPEFSFRADTDNPLFGRTHNPWGR-----HISPGGSSGGAGASVMAGIGALAHGNDIG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLK 233 GS+R PA+ G V +KP GR + GI+ A S+ G+ITR+ D + + Sbjct: 180 GSLRFPAAANGAVTVKPGLGRVPAWNPSQKAERGIL--AQSMSVQGLITRSAADLHLAMP 237 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 ++ D D V LP R Q + V + L P ++ + L Sbjct: 238 SLIEPDARDPFHVPLPW----RGETQE-GPIKVAFTRNCHGYDLHPEVNLALETARDALV 292 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 DAG + E+ P+ +D R G R ++ M + Sbjct: 293 DAGYVVEEVEPPNV---------------------FDAGRTGYRALMGEVYAMMKQDVDA 331 Query: 354 GFGQEVKHRI----------MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 G E +I GT +L SHY R + F Q + Sbjct: 332 A-GSETVQKIFEVYFQEFPPFAGTELLQMMAKRSHYAREWSL-----------FMQDYPL 379 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALC---EKKMPL 459 +LTP P F ++ + + + V++ A+N GLPA VPA L P+ Sbjct: 380 VLTPFLPQPFFKPNRDTEGAEGVHEVLGCAVYSYAMNFLGLPAGCVPARLAPLPSGPQPI 439 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 +Q++ + +RE+ IE+ G F PH W Sbjct: 440 NVQIVSRRWREDMAVDACIAIEQRVGRFSPHLW 472 >gi|227529347|ref|ZP_03959396.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus vaginalis ATCC 49540] gi|227350775|gb|EEJ41066.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus vaginalis ATCC 49540] Length = 495 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 127/500 (25%), Positives = 216/500 (43%), Gaps = 56/500 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D +RSK +S+ ELV + I+ ++ N Q+NA I + R + ++ R + + G Sbjct: 16 DLVRSKKVSSFELVSAAIEKVKAENPQLNAVIHL-----REKSALNEARQLTDHGQPFLG 70 Query: 74 IPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI IK G + + + Q L G +++G+ N EF + Sbjct: 71 VPILIKGLGQQLAGEPDTNGNKLFQNNVAQATNNFVQALQQAGFIIIGQTNFPEFGWKNI 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + +GP +PW + TPGGSSGGS+AAVA + G D GGSIR P+S++G Sbjct: 131 TDAKLFGPARNPWNT-----AVTPGGSSGGSAAAVAAGWVPLAAGNDGGGSIRIPSSWSG 185 Query: 193 TVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT GR + I+FA +TR+V DSA LL + Sbjct: 186 LIGLKPTRGRVPTGPSDWRSWQGASINFA--------LTRSVEDSARLLDQLQTVQSAAV 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ---QGISWLKDAGAKIV 300 V P + L+Q ++ + +G + + +P D+ Q +++L D G K Sbjct: 238 FQVPKFTPGFNHVLEQPMKNIEIGYTVKSPVG--TPVSDEAKQAVLDAVTFLSDQGFKCT 295 Query: 301 EISLPHTQYAL-PAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMY--------ENT 350 E + P AL +YY ++ E + A +DG+ RY R +D +E+ EN Sbjct: 296 EFTDPVDGVALMNSYYTMNAGETA---AMFDGIERYLGRPASRDDMELLTYALWKTGENV 352 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL----IKRDFTEAFEQGVDVILT 406 + + + + + + + +D + L + D ++ +T Sbjct: 353 SAAQYSEALSQWDQASS--IHDQLHDQYPLFLTPTNAQPAPRVDHDLITPTDRKRMEHIT 410 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +P L ++ + + FT NM G PAIS+P +C PLG+Q I + Sbjct: 411 ELSPDEQRQLIYDQ----WLPALTYTPFTEQANMTGEPAISLPTHVCANGTPLGIQFIAR 466 Query: 467 PFREETLFSVGQIIEKEAGY 486 E L + ++ E + + Sbjct: 467 KGNESLLLQMAKLFEDQHQF 486 >gi|91780483|ref|YP_555690.1| putative amidase [Burkholderia xenovorans LB400] gi|91693143|gb|ABE36340.1| Putative amidase [Burkholderia xenovorans LB400] Length = 471 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 129/497 (25%), Positives = 213/497 (42%), Gaps = 53/497 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ + +++ R + +S VE++ + + + + +NA+ + + A +AA E++ Sbjct: 1 MSEIVMLNIAQLVAGFRQRSLSPVEVMCAVLDRVTKLDPAVNAFCALDEEGAMSAACEAE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G+ L+G+P+ +KD A G T+ S R ++ +L GA+ Sbjct: 61 RRWTRGEPCGPLDGVPVSVKDLVAVAGFPTRHGSWTASPDRESVDAPAVARLRRAGAIPF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF + G +PW + + +PGGSSGGS+ AVA + S+ TD Sbjct: 121 GKTTTSEFGNKIVTDCPLTGATRNPWDT-----RLSPGGSSGGSAVAVALGMGPLSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PA ++G VG KPT+ S+ +L G I RTVRD+A++L A+ G + Sbjct: 176 GGGSIRIPACWSGVVGFKPTFALVPAGNAASWT-ALSTLGPIARTVRDAALMLDAMTGAN 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 ++ P Y ALD + G+ +G ++P I + GA + Sbjct: 235 NDGSSEGGSPA-GYSAALDDGVVGLRIGWCPAPDGVPVAPDIAACVGRAADTFGALGATV 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ + + +A Y YG G+ M+ + F Q V Sbjct: 294 IQTDV-------------------APIADY----YG---NGR----MHSVQWCVFFAQRV 323 Query: 360 KH-----RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF----TEAFEQGVDVILTPTTP 410 +H R ++ + + + A + L+ R E F + D++LTPT Sbjct: 324 RHMEAADRTLLDPELTALADAGARIDTATFVDALLARHALGASMETFFERYDLLLTPT-- 381 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 F G + T N AGLPAISVP +P GLQ+IG+ + Sbjct: 382 ---FHCGPPPVPGLPGHLRSAPLLTAWCNQAGLPAISVPCGF-AGDLPTGLQIIGRRGSD 437 Query: 471 ETLFSVGQIIEKEAGYF 487 + + E G F Sbjct: 438 ALVLRAARAYELARGDF 454 >gi|226360372|ref|YP_002778150.1| amidase [Rhodococcus opacus B4] gi|226238857|dbj|BAH49205.1| putative amidase [Rhodococcus opacus B4] Length = 481 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 150/496 (30%), Positives = 222/496 (44%), Gaps = 61/496 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L + D ++V + + I+ S S++NA+ V KA A A E+D+RI G+ L G+P Sbjct: 29 LVAGDTTSVAATRAALDRIDASQSRLNAFKVVRRNKALAEAAEADRRIAAGERLPLLGVP 88 Query: 76 IGIKDCFATKGIHTQ-ACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 I +KD G T C F P +S V ++L GAV++GK N E Sbjct: 89 IAVKDDVDVAGEPTAFGCP---GDFPPAARDSEVVRRLRAAGAVVVGKTNSPELGQWPLT 145 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +PW + D+ TPGGSSGG++AAV+ L AA+IG+D GSIR PA++T Sbjct: 146 GGPAFGHTRNPW----NGDR-TPGGSSGGAAAAVSAGLVAAAIGSDGAGSIRIPAAWTHL 200 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TCVNLPVPD 252 VGIKP GR S L G + RTV D+A+LL AG E D T + V D Sbjct: 201 VGIKPQRGRISTWPAAEAFYGLTVNGPLARTVADAALLLDVAAGPHEGDIHTPAAVTVSD 260 Query: 253 -YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA----GAKIVEISLPHT 307 R + +++ IP L P + +QG++ + +A G ++V Sbjct: 261 AVGRDPGRLRIALSLRIPFTATPTTLHPEV----RQGVARIAEALRRLGHRVVVDD---- 312 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 P Y G+ +GL + ++ + + R + V R Sbjct: 313 ----PDY----------------GIMFGLGFLPRSMVGIDDWMRKVPDPSLVDPRTK--G 350 Query: 368 YVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + R LR AR ++R F++ D++L PTT A P + E G + Sbjct: 351 NARTGRLLRGAPLRAARAAEPRMRRRVGAIFDE-YDLVLAPTT---ATPPPRVEAIDG-I 405 Query: 427 GHIYNDVFTVAV-------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 G D AV N+ G P+++VPA +P+G QL+G E L SV Sbjct: 406 GSWATDKVITAVCPYAWPWNVLGWPSVNVPAGFTSGHLPIGAQLMGHDNAEPLLVSVAAQ 465 Query: 480 IEKEAGY--FRPHKWW 493 +E + RP KWW Sbjct: 466 LESVLRWDLERPGKWW 481 >gi|313224887|emb|CBY20679.1| unnamed protein product [Oikopleura dioica] Length = 637 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 116/471 (24%), Positives = 207/471 (43%), Gaps = 41/471 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E + E R+ ++ +++ + I+ I+ +N + + + A ES + Sbjct: 159 NEFRYRRAFEYVQAYRNSQLTPLDVAERIIETIKITNPSLKMLCDWHPEMILEQARESTE 218 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R I+G L+G +KD + G ++ ++ VT K+ D G +++G Sbjct: 219 RYISGKILSPLDGTFCVVKDQISVAGHCNRSGLSFINKIEDEDAPLVT-KVRDAGIIIVG 277 Query: 121 KLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 NM E M +N +SY+G +P +TD + PGGSS G++AA+ L IGT Sbjct: 278 ISNMTELGMSVFGANPSSYHGTCRNP----INTD-YYPGGSSSGTAAAICSGLVPFGIGT 332 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGII---SFAPSLDQAGIITRTVRDSAILLKAI 235 D GGSIR P+ TG VG+K T+ R S + ++ G + + D A+ + + Sbjct: 333 DGGGSIRMPSCQTGIVGLKTTFSRVSANSYAKAKTCCSTVANIGPMASNIIDLALFYQVL 392 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKD 294 AG DA + P + L + G+ +G+ +++ LS P + +++ I +L + Sbjct: 393 AGPIRGDAFSMAQPKVKVPKELTPYLDGIKIGV--DWKWAELSRPEVFINFKKKIEYLAE 450 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA+I+ + +P + + I +E S + E R I Sbjct: 451 RGARIIGVDIPELDFISTGHLISIVSEGSEAIG-----------------EALNKQRKIA 493 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP-TSA 413 ++I LS C S + A K RT + + + + +DV+ PT T+ Sbjct: 494 -----PDNVVILNAGLSC-CMASDFTLAAKYRTRL-MTYLKGLFKTIDVLANPTCAQTAE 546 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQL 463 L +EN S G + V + N +G+P++SVP+ +P G+ L Sbjct: 547 RILDGDENGSWKFGATLRYMMYVKLSNYSGIPSMSVPSGFAPNGLPTGIML 597 >gi|73537603|ref|YP_297970.1| amidase [Ralstonia eutropha JMP134] gi|72120940|gb|AAZ63126.1| Amidase [Ralstonia eutropha JMP134] Length = 498 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 137/496 (27%), Positives = 218/496 (43%), Gaps = 53/496 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L ++SAVELV + A + +NA + ARAAA+ESD+R G AR L+G+ Sbjct: 21 LADGEVSAVELVQACEAAWHAWHGVINALVVSDFDAARAAAQESDRRRSAGQARGVLDGV 80 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P IK+ F G T + L G ++ V Q+L D GA++LGK N+ +G + Sbjct: 81 PFSIKESFDVAGWPTTCGNPALRGRVARRDAVVVQRLRDAGAILLGKTNVP---LGLRDW 137 Query: 135 TSY---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 SY YG +P TPGGSSGGS+AAV L A +G+D G S+R PA + Sbjct: 138 QSYNEIYGTTRNP-----HDPSRTPGGSSGGSAAAVCAGLSAFDVGSDIGSSLRNPAHYC 192 Query: 192 GTVGIKPTYGRCSRLGIISFAPS------LDQAGIITRTVRDSAILLKAIAGY--DECDA 243 G +KP++G G + P+ ++ AG + R+ RD +L+AIAG D+ A Sbjct: 193 GIFSLKPSHGLVPLAGHGT-GPARFGEQDINVAGPLARSARDLEPVLRAIAGPYGDQEMA 251 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 + LP + R D + +P + + S + Q G WL GA++ + Sbjct: 252 YRLELPACPHRRLADFRV----AVLPSHPQAEADSAVATQIEQLG-HWLAQQGARVAWHA 306 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF-GQEVKHR 362 P A + ++ A+++L D + + ++ + G + HR Sbjct: 307 RPDFDAAELWHAYVTLLRAATSLHMDDAAYADALDRAANAAAGDASYSTLQYTGATLSHR 366 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--- 419 +LR + R + + F DV+L P T+AF L + Sbjct: 367 ---------------DWLRLQAARERFAAAWRQLFADH-DVLLCPAATTTAFTLNEAGEP 410 Query: 420 -----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E N S + + GLP+ P +P+G+Q++ +++ T Sbjct: 411 WTRMLEVNGQSQPMTTQLFWAGHSGLCGLPSAVAPIGPASNGLPVGVQIVAGRYQDLTAL 470 Query: 475 SVGQIIEKEAGY-FRP 489 ++E +AGY FRP Sbjct: 471 RFATLLE-DAGYAFRP 485 >gi|325914412|ref|ZP_08176759.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937] gi|325539420|gb|EGD11069.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937] Length = 486 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 126/464 (27%), Positives = 202/464 (43%), Gaps = 73/464 (15%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQAC 92 I +N ++ A ++ ++ A A + G D L G+P +KD F G T A Sbjct: 70 INQANDRLCAITRLLPARSAADAARVQAALAGGSDGGVLAGVPFVVKDLFDVAGQVTTAG 129 Query: 93 SHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 + I P ++ V Q+L D GAV++G NMDEFA G + ++YG +P Sbjct: 130 AAIRAQCAPATRDAAVVQRLCDAGAVLVGTANMDEFAYGFATVNAHYGTTANP-----HD 184 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 + GGSSGGS+AAVA L ++G+DT GSIR PA+ G G++PT+G G+ F Sbjct: 185 HRHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGVYGLRPTHGALPLEGVFPF 244 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD----YERALDQSIQGMTVG 267 +LD G +V D + + + G+ NL + ++R LD Sbjct: 245 VDALDVVGPFATSVADVRRVYEVMHGHALHSCNVANLRIARLGGWFQRNLD--------- 295 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 P +D GI L A I LP + A A ++++ AE Sbjct: 296 -----------PELDA----GIGALLAACHSTTLIELPQAERARAAAFVLTAAEGGH--- 337 Query: 328 RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 R+ R L G F + R++ G + +S D AR+ Sbjct: 338 RH---RAALGTHGDQ------------FDPATRDRLLAGLQLPASAVAD-----ARRFAQ 377 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPL--------GKEENNSGSMGHIYNDVFTVAVN 439 + + ++ VDV++ P TP A + G + ++G +FT + Sbjct: 378 WFRAAMQQLWDD-VDVLIAPATPCVAPRIDQDTIVIDGLPVSARANLG-----IFTQPLG 431 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +AG P ++ P ++PLG+QLI P RE+ LF++ +E++ Sbjct: 432 LAGCPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFALAAHLERD 474 >gi|148556025|ref|YP_001263607.1| amidase [Sphingomonas wittichii RW1] gi|148501215|gb|ABQ69469.1| Amidase [Sphingomonas wittichii RW1] Length = 521 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 126/481 (26%), Positives = 219/481 (45%), Gaps = 39/481 (8%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR-IINGDARD-LE 72 R+RS+ +S E++ +++ I+ +N +NA + V + A AA + R I G R + Sbjct: 59 RIRSRAVSCREVMTAHLDWIDRANPALNAIVSRVERPALLAAADEADREIAAGRHRGWMH 118 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P +KD AT+GI T S I P + ++L GA+++GK N+ EF +GS Sbjct: 119 GLPHAVKDLAATRGIRTTMGSPIFADNVPKADEIFVERLRAAGAILIGKTNVPEFGLGSQ 178 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + Y PV R+ + T GGSSGG++AA+A + + G+D GS+R PA + Sbjct: 179 S----YNPVFGVTRNAYDPSR-TAGGSSGGAAAALAARMVPVADGSDFAGSLRNPAGWNN 233 Query: 193 TVGIKPTYGRCSRLGIIS--FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G +P+ GR G + F ++ G + RTV D A+LL +AGYD ++ Sbjct: 234 IFGFRPSAGRVPH-GPTNELFVQNIGYEGPMARTVGDLALLLSVMAGYDARTPLSLDGDP 292 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + LD+ ++G+ +G + ++P + G+ L+ AG I +SL Sbjct: 293 AVFAGPLDRDMKGVRIGWLGDLGGVPMAPGMLDLCLSGLRRLEAAGCVIEPVSLDIDHDT 352 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 L ++ +R G G L R + E I G + Sbjct: 353 LWKAFV--------------QLRQGFLAGGLGPLYADPARRKL-LKPEAVWEIENGMKLS 397 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + Y++ +R+R + + +AFE+ D + P+ FP + + + + Sbjct: 398 AVDLYNASVVRSR-----VYEAYRKAFERH-DFLALPS--AQLFPFDADLHWPKEIAGVA 449 Query: 431 NDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 D + ++ G PA+ VPA + +P GLQL+G ++ + +G+ E+ A Sbjct: 450 MDSYHRWMEIVAGPSLTGCPALCVPAGFGPEGLPSGLQLVGPSRQDLAVLQLGRAYEQVA 509 Query: 485 G 485 G Sbjct: 510 G 510 >gi|302497628|ref|XP_003010814.1| amidase family protein [Arthroderma benhamiae CBS 112371] gi|291174358|gb|EFE30174.1| amidase family protein [Arthroderma benhamiae CBS 112371] Length = 592 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 14/295 (4%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 R ++ + +V +Y+ I NS + A E+ A + ++R + L G+PI Sbjct: 99 RQGNVLIIVVVQTYVARIAEVNSTVRAVTEINPDALTIAKQMDNERKMGKLRGPLHGLPI 158 Query: 77 GIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGS 131 IK+ F + + A S+ + G R ++TV KL + G V++GK ++A + S Sbjct: 159 VIKNNIFTDDKMSSTAGSYAIFGARTSADATVATKLREAGLVIMGKSGASQWANFRSLNS 218 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +N S YG ++ + P GSS GS A L A++GT+T GSI PA + Sbjct: 219 TNGWSAYGGQVTAAYIKNQD----PSGSSSGSGVASDLGLAFATLGTETSGSIVSPADKS 274 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 VG+KPT G SR ++ + D G + R+V+D+A LL+ IAG D D +P Sbjct: 275 NIVGLKPTVGLTSRRFVVPISERQDTVGPMARSVKDAAYLLQVIAGKDSNDNYTSAIPFD 334 Query: 250 -VPDYERALD-QSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVE 301 +PDY +A D +++G +G+P+ + SP T+ + Q ++ +K AGA IVE Sbjct: 335 TIPDYVKACDINALKGKRIGVPRNVIKIFGSPQTVVDQFNQALAVMKKAGAIIVE 389 >gi|118467846|ref|YP_887705.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] gi|118169133|gb|ABK70029.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mycobacterium smegmatis str. MC2 155] Length = 732 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 106/206 (51%), Gaps = 13/206 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+PI IKD TKGI T S + P ++TV +L GAV+LGK M +FA G Sbjct: 305 LHGVPILIKDQGETKGIPTAFGSTAFADYIPDTDATVVDRLRKAGAVILGKTAMCDFAAG 364 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + +S +P+ D+ T GGSS G++AAV LC IG DTGGSIR P+SF Sbjct: 365 WFSFSSRTDHTKNPY----DLDRET-GGSSAGTAAAVTANLCLVGIGEDTGGSIRLPSSF 419 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD---ATCVN 247 T G++ T G SR G D G + R V D A +L I GYD D A + Sbjct: 420 TNLFGLRVTTGLVSRTGFSPLVHFQDTPGPMARNVSDLAAVLDVIVGYDPTDSYTALATS 479 Query: 248 LP-VPDYERALD----QSIQGMTVGI 268 P V DY ALD ++ G VG+ Sbjct: 480 GPEVGDYGEALDGVDADTLSGFRVGV 505 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 TV + LPA+S+P + +P+GL+++G+P E L + E Sbjct: 666 TVIASQTSLPAMSIPVGFTDSGLPVGLEVVGRPLTERALLRFARAWE 712 >gi|46203189|ref|ZP_00051916.2| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Magnetospirillum magnetotacticum MS-1] Length = 423 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 129/254 (50%), Gaps = 15/254 (5%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L M V + + L ++A EL +++ IE N + NA I V+ A A A D Sbjct: 19 AQLVEMTVEDVQRALGEGRVTAEELAKAFLARIETYNPRYNALI-VMNPHALAEARAIDA 77 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDN 114 R G+A L G+PI IKD G+ + H L P ++ VT ++ + Sbjct: 78 RRAAGEALGPLAGVPIVIKDTMDMAGLPSTGGWHFLAAAAGGIDLIPATDAPVTARMREA 137 Query: 115 GAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 G V+LGK N+ + GS S+ GP ++P + D+ PGGSS G++ AVA L Sbjct: 138 GCVILGKTNVPVLSHTGSHANDSWAGPTLNPA----APDRI-PGGSSAGTATAVAASLAV 192 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL-DQAGIITRTVRDSAILL 232 + +TGGSI+ PAS G VGIKP++ G++ A S D G I R VRD+A+ L Sbjct: 193 LGLAEETGGSIQNPASAQGLVGIKPSFALVPNAGVMPLAGSTRDVVGPIARCVRDAALTL 252 Query: 233 KAIAGYDECDATCV 246 A+AGY D V Sbjct: 253 DALAGYTAADPKTV 266 >gi|322435423|ref|YP_004217635.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321163150|gb|ADW68855.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 599 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 126/490 (25%), Positives = 213/490 (43%), Gaps = 45/490 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E+ F V + K I++ L Y+ I N ++ I + A A +D Sbjct: 138 AEIAFAPVFTLMQWIAGKKITSERLTSIYLDRIRKYNGELRCVITATPEIAMKQARAADA 197 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G + L GIP G KD T GI T + P ++ V KL + GAVM+ Sbjct: 198 EIAAGRYKGPLHGIPWGGKDLMDTAGIRTTYGADCFQHRVPEKDAAVVAKLHEAGAVMIA 257 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 KL++ A+ N+ + G ++PW ++ + G ++A + GF SIG++T Sbjct: 258 KLSLGALAL---NDVWFGGQTMNPWL-LEEGSSGSSAGPGSATAAGLVGF----SIGSET 309 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSI P G G++PT+GR R G ++ SLD+ G + R+V+D+ +LL+AI G D Sbjct: 310 GGSIVSPTMRCGVNGLRPTFGRVPRTGAMTLCWSLDKLGPMCRSVQDTMLLLQAIHGEDA 369 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V+ A + ++G+ VG + + + +D+ + I+ L G V Sbjct: 370 GDVASVSA---SLAYAPAEPVKGLKVGYFPGWMKEAPATNVDRHALEVITKL---GMTAV 423 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-RSIGFGQEV 359 ++LP Y + + A A+ D L+ + D + NT R F V Sbjct: 424 PVTLPDWPYGSLNTILFAEAAAAFEEITLDHRVDQLKAQVPD---AWPNTFRQARFLSAV 480 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +++A ++R ++ + + VD++L P+ + Sbjct: 481 D------------------FVQADRMRRMVAMEMARVMGE-VDLLLVPSLRDEMLTI--- 518 Query: 420 ENNSG----SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 NN+G ++ + +V + A S K+P G+ LIG+ F E T+ Sbjct: 519 SNNTGHPSLTLRAGFVEVNETRSDWAPGGEWSSKKLKAPHKVPHGVTLIGRLFDEGTIVR 578 Query: 476 VGQIIEKEAG 485 VG +EKE G Sbjct: 579 VGMAMEKEFG 588 >gi|284990086|ref|YP_003408640.1| amidase [Geodermatophilus obscurus DSM 43160] gi|284063331|gb|ADB74269.1| Amidase [Geodermatophilus obscurus DSM 43160] Length = 477 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 145/492 (29%), Positives = 221/492 (44%), Gaps = 45/492 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L+ + E +R+ ++S VELV+ ++ IE+ + + A++ V ++A AA +++ Sbjct: 5 TQLHDLTALEQAAAVRAGEVSPVELVEHVLRRIEDLDPGLGAFLTVTPERALTAARRAER 64 Query: 62 RII-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R+ G+ L G+P IKD T G+ T S +L P + V +L D G + +G Sbjct: 65 RVRGGGELPPLHGVPTAIKDLNNTAGVRTTFGSTVLAENVPTVDDAVVTRLADAGTISVG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + EF + GP PW D T + G S G + A AG L A G+D Sbjct: 125 KTSTPEFGFPCYTDNELVGPARCPW---DPT-RLAGGSSGGAAVAVAAGMLPVAQ-GSDG 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PAS G VG+KP+ GR S S L G + RTVRD+A LL A+AG Sbjct: 180 GGSIRIPASVNGLVGLKPSRGRVSNAPFGSDVTGLGTNGPLARTVRDAAALLDAMAGPVI 239 Query: 241 CDATCVNLPVPDYER---ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D P+P E A D+ + +G E SP D + + D A Sbjct: 240 GDPAWAP-PLPPGETFLGAADRPPGRLRIGRHLE------SPMADAGLEPEVQTAFDDAA 292 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGV----RYGLRVEGKDILEMYENTRSI 353 +++E L H +P+ + + L ++ V L V + + E+ TR Sbjct: 293 RLLE-ELGHEVEDVPSGLL-----GADVLGAFERVWTLSGTLLPVPPERVGELRPLTR-- 344 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 E++ R + LS+R + A L R FT A G DV+L P T + Sbjct: 345 ----ELRARGL----ALSAR----EAMEALTALRLFARRFTTA-TAGYDVLLAPVTTMTP 391 Query: 414 FPLGKEENNSGSMGHIYND----VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 PLG + + FT N+ G PA+SVP +P+G L+G+P Sbjct: 392 RPLGWFDADGDGAADFERQKRYAAFTAVFNVTGHPAVSVPLYWTPDGLPVGTMLVGRPAD 451 Query: 470 EETLFSVGQIIE 481 E TL ++ +E Sbjct: 452 EVTLVALAAQLE 463 >gi|254511370|ref|ZP_05123437.1| amidase family protein [Rhodobacteraceae bacterium KLH11] gi|221535081|gb|EEE38069.1| amidase family protein [Rhodobacteraceae bacterium KLH11] Length = 442 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 132/470 (28%), Positives = 205/470 (43%), Gaps = 61/470 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIK 79 I VEL ++Y+ AI+ + Y V +ARA A + R G R L +G+PI K Sbjct: 21 IDPVELTEAYLTAIDAHPHRDAIYARVTHSRARAEARAAQDRAKLGLRRSLLDGVPISWK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSY 137 D F T GI T++ S +L P ++ V + G V LGK +M E A N + Sbjct: 81 DLFDTAGIGTESGSALLKDRVPDADALVVRNATAMGTVCLGKTHMSELAFSGLGLNPVTA 140 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 P ++ ++ PGGSS G++A+VA L A IG+DTGGS+R P+++ VG+K Sbjct: 141 TPPCVN-------DEEAVPGGSSSGAAASVAWGLAACGIGSDTGGSVRIPSAWNDLVGLK 193 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 T GR S G++ D G +TR+V D+A +L + G C +L Sbjct: 194 TTAGRVSLEGVVPLCLKFDTVGPLTRSVEDAAHMLALLEG-----GACADL--------R 240 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 +++G + D L K + + LKDAGA+IV + +P A+ ++ Sbjct: 241 GATLKGRRFADLQNVAKDDLRDPPGKAYDAALLRLKDAGAEIVPLDVPELNEAMSLSGVL 300 Query: 318 SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS 377 EA YGL +D++E + E+ R +G + Y Sbjct: 301 YTTEA-----------YGLW---RDVIEANPDA----MYPEILERFRMG------KAYSG 336 Query: 378 HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--- 434 A + + R +A G D +L PT P P + S ++ ++ Sbjct: 337 PDYVAAWSKLMACRRAWDAATAGFDAVLVPTAPI--LPPNLDRLMSDHEYYVTENLLALR 394 Query: 435 -TVAVNMAGLPAISVPAAL--CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T N+ GL A+++P C GL ++G P EE L +G E Sbjct: 395 NTRIGNLMGLAALTLPTGTPGC------GLMMLGYPGSEEALLRLGAAAE 438 >gi|254473871|ref|ZP_05087265.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudovibrio sp. JE062] gi|211956981|gb|EEA92187.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudovibrio sp. JE062] Length = 417 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 125/463 (26%), Positives = 199/463 (42%), Gaps = 59/463 (12%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCF 82 ++L D Y++ I ++E A++ +AE +D+R + L G+ + +KD F Sbjct: 1 MDLPDGYVERI---------FLEFDAERIMRSAEAADQRQKDAYGTLPLHGVAVSLKDLF 51 Query: 83 ATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 GI T A S L P E + V L GA G+ NM E A ++G Sbjct: 52 DEFGIVTSAGSSFLRNRAPACEDAKVVSALKAAGAFTCGRTNMSELAFTGLGLNPHFG-- 109 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 SP +D+ PGGSS G+ A+V LC A++ TDTGGS+R PA+ G KPT Sbjct: 110 -SPENILDALR--IPGGSSSGAMASVGLGLCDAALATDTGGSVRIPAALNSLYGFKPTRA 166 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 S G+ S PS D G I R++ L ++G C+ VP +LD Sbjct: 167 AISTKGVFSICPSFDTVGFIARSLHMCTRLHAVLSGQ------CL---VPRKISSLD--- 214 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 G+ VG+ + L + + + + ++DAGA I +S P ++ I E Sbjct: 215 -GLHVGLVASPLAEGLDTQVSADFDRAMLAIRDAGAIIAPVSEPALCHSTTCLGTICSYE 273 Query: 322 ASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 A++ ++ Y +EG K + Y V RI+ V S ++ Sbjct: 274 ATALVSGY--------LEGLKQTADPY-----------VLERILQSAEVTSKEMEEARSK 314 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 R IR ++ F D+++ PT P A L ++N +G + T AVN Sbjct: 315 RVEAIRAF--KEMAGKF----DILIAPTVPIIAPMLSDIDSNLEKIGSQLSQ-NTRAVNW 367 Query: 441 AGLPAISVPAALCEKKMP-LGLQLIGQPFREETLFSVGQIIEK 482 A+++P + P GL L G+ + + + +I+K Sbjct: 368 VDGCAVTIP--MNTYGTPGTGLMLFGRAGSDWHVLEMASLIDK 408 >gi|119715729|ref|YP_922694.1| amidase [Nocardioides sp. JS614] gi|119536390|gb|ABL81007.1| Amidase [Nocardioides sp. JS614] Length = 468 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 121/490 (24%), Positives = 198/490 (40%), Gaps = 64/490 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-----AAAEESDKRIINGDARD 70 +R+K+ISA EL+D ++ I N ++NA + + ++AR A + D Sbjct: 17 VRAKEISARELLDLHLARIAERNPELNAIVSLDEERAREGAAEADRALAAADRDGTDVGP 76 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P KD A G T S + P + + +++ G V++GK N+ EFA G Sbjct: 77 LHGLPFAFKDTHAVAGWRTTYGSPLYADHVPDADELIVERVRRAGVVVIGKTNVPEFAAG 136 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +G ++P S SSGG+++A+A + + G+D GGS+R PASF Sbjct: 137 SHTFNRVFGTTLNPVDPSRSAGG-----SSGGAASALAAGMVPLADGSDMGGSLRNPASF 191 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G++P+ GR + + + G + R V D A+LL +AG D + P Sbjct: 192 CGVFGLRPSLGRVPEWPLYNQWETTSVGGPMARNVGDLALLLSVLAGPDPRAPQALGDPG 251 Query: 251 PDYERALDQSIQGMTVGIPKE----YRLDYLSPTIDKTWQQGISW-----------LKDA 295 + L S+ G+ V + + + +D+ + ++ + L +A Sbjct: 252 ATFAPPLAGSLAGLRVAVSVDLGGAFEVDHEVAAVVESSAAAFTAAGAQVTAAHPVLTEA 311 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + H Q L P +LA D +R G + G D+ Y + Sbjct: 312 DDTFRTLRAWHLQAKLGGLLAAHPDGLKPSLA--DNIRLGEHLTGADVARAYTQRTA--- 366 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 LS R R+F QG D+++ P + FP Sbjct: 367 --------------LSERM----------------REFFVPGGQGFDLLVLPVSQVPPFP 396 Query: 416 LGKE--ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +E +G Y D A + + G PAISVP +P+GLQL+ R+ Sbjct: 397 ADQEYPATINGRPMQTYLDWMRAAYLITVTGCPAISVPFGHTSDGLPIGLQLVAAHGRDR 456 Query: 472 TLFSVGQIIE 481 L +E Sbjct: 457 FLLETAAALE 466 >gi|47569572|ref|ZP_00240250.1| glutamyl-tRNA(gln) amidotransferase, A subunit [Bacillus cereus G9241] gi|47553755|gb|EAL12128.1| glutamyl-tRNA(gln) amidotransferase, A subunit [Bacillus cereus G9241] Length = 127 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 3/123 (2%) Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 M+GT+ LSS YD++Y +A+++RTLIK DF F DVI+ PTTPT AF +G++ ++ Sbjct: 1 MLGTFALSSGYYDAYYKKAQQVRTLIKNDFENVFAN-YDVIIGPTTPTPAFKVGEKVDDP 59 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +M ND+ T+ VN+AG+PAISVP MPLGLQ+IG+ F E T++ V E+ Sbjct: 60 MTM--YANDILTIPVNLAGVPAISVPCGFGANNMPLGLQIIGKHFDEATIYRVAHAFEQA 117 Query: 484 AGY 486 Y Sbjct: 118 TDY 120 >gi|87119095|ref|ZP_01074993.1| Amidase [Marinomonas sp. MED121] gi|86165486|gb|EAQ66753.1| Amidase [Marinomonas sp. MED121] Length = 595 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 128/484 (26%), Positives = 206/484 (42%), Gaps = 57/484 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSY-IQAIENSNSQMNAYIEVVAQKARAAAEES 59 M LN +A+ ++ ++ DI+A EL+ S QA+E + + NA+I ++ ++ + + S Sbjct: 1 MFNLNIIAL---KNAYKNNDITAKELIFSLRQQALEQA--EYNAWITLL-EETKLSEYLS 54 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + D L G+P IKD G T A + + P + V ++L GA+ L Sbjct: 55 YLEGKSVDELPLYGVPFAIKDNIDLAGTPTTAACPDFE-YTPSKSAFVVEQLIKAGAIPL 113 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+D+FA G S YG ++ + + + GGSS GS+ + A + ++GTD Sbjct: 114 GKTNLDQFATGLVGMRSPYGEGVNAFNT-----DYVSGGSSAGSAISTALGQVSFALGTD 168 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS R PA+ +G KPT G S G++ SLD + +D+A++ YD Sbjct: 169 TAGSGRVPAALNNLIGHKPTKGLFSNSGLVPACLSLDCITVFALNTQDAALITSIAGQYD 228 Query: 240 ECDATCVNLPVPDYERALDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 E D+ + R D + + + G+P E Y +P ++Q I L++ G Sbjct: 229 ENDSYARPNTPENLLRYFDPKLPKSFSFGVPAECDF-YQNPETKALFEQTIKGLENLGGT 287 Query: 299 IVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 V I P T A L EG + E + T Q Sbjct: 288 KVTIDFEPFTTAA------------------------KLLYEGPWVAERWLAT------Q 317 Query: 358 EVKHRIM---IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 VK M I T + S+ + + + + +A VD ILTPT PT Sbjct: 318 NVKRESMLPVIQTIIGSAEGKTAADAFSAQYELQHFKKICDAQVDAVDFILTPTCPTQ-- 375 Query: 415 PLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + E + + YN + +T +N+ A S+P K+ G+ L FR+ Sbjct: 376 -FTRAELRAEPIK--YNSILGTYTNFMNLLDYTATSIPVGFTNNKVSWGVTLFSHAFRDI 432 Query: 472 TLFS 475 L S Sbjct: 433 ELLS 436 >gi|227512367|ref|ZP_03942416.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus buchneri ATCC 11577] gi|227084340|gb|EEI19652.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus buchneri ATCC 11577] Length = 488 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 122/511 (23%), Positives = 217/511 (42%), Gaps = 76/511 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 + ++ + + + IS +L+ + IE N ++NA + ++AR A + Sbjct: 10 SATQLTNLIHNHQISRADLLQQLLDTIEKQNPRLNAVTHLWPERARQMAAH-----FKDE 64 Query: 68 ARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + GIPI +K + KG S +L + + + L G + +G+ N E Sbjct: 65 GQPFAGIPILLKGLGQSFKGEIDSGSSQLLRDYIAPETNNFVKGLLSAGLIPVGETNAPE 124 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F + ++ YG +PW + + PGGSSGGS+AAV + G D GGSIR Sbjct: 125 FGFKNITDSKLYGNAHNPWNT-----DYQPGGSSGGSAAAVGDGWLPIAAGNDGGGSIRI 179 Query: 187 PASFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 P+SF+GT+G+KPT GR + I+FA ITR ++D+A LL A++ Sbjct: 180 PSSFSGTIGLKPTRGRVPTGPNEWRGWQGASINFA--------ITRDIQDTAKLLDALSV 231 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAG 296 + LP D+E L++ + + + + ++ +S + + +L+ AG Sbjct: 232 VQMSAPFQIPLPDHDFESTLNELPKNLKIAFSTKSPVNTPISNEAKRAVNNAVGFLEKAG 291 Query: 297 AKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 I E+ P L YY ++ E ++ A D D +++N + + Sbjct: 292 YDITEVDAPIDGIQLMQTYYTMNAGETATMFANMD----------LDSQTIHDNVEPLTW 341 Query: 356 GQEVKHR-IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V + + +Y + +D + T+ + F D+ LTPTT A Sbjct: 342 ALNVTGKSVSAVSYSQALAFWD------QAAATM------DTFSDQYDLYLTPTTAFQAP 389 Query: 415 PLGKEENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAISVPAA 451 + ++ + +M + N FT N++G P IS+P Sbjct: 390 KVDQQLVSDQNMEKLINIKEFAPNERLQIIWDQWLPALTISPFTQLANISGQPTISLPTY 449 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +PLG+Q + + RE+ L +G+ EK Sbjct: 450 VGNNGLPLGIQFMAKKGREDLLLQIGRFFEK 480 >gi|85703940|ref|ZP_01035043.1| amidase family protein [Roseovarius sp. 217] gi|85671260|gb|EAQ26118.1| amidase family protein [Roseovarius sp. 217] Length = 447 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 117/421 (27%), Positives = 186/421 (44%), Gaps = 64/421 (15%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+P+ KD F + GI T+A S +L G P ++ V G V LGK +M E A Sbjct: 72 LDGVPVSWKDLFDSAGIATEAGSALLKGRVPARDAEVLHNATAAGLVCLGKTHMSELAFS 131 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 PV + +++ D PGGSS G++A+VA L IG+DTGGS+R P+++ Sbjct: 132 GLG----LNPVTATPPCVNNADA-VPGGSSSGAAASVAFDLAPCGIGSDTGGSVRIPSAW 186 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+K T GR S G++ D G + R+V D+A++L A+ G D Sbjct: 187 NDLVGLKTTAGRVSLQGVVPLCLRFDTVGPLARSVEDAALMLAALEGRKPADLR------ 240 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 ++ G+ + + ++ + P + + ++ L+DAGA I +I P A Sbjct: 241 -------GPTLVGLRFAVLRTGVMEDIRPEPARAHEAALAALRDAGAVIEDIEAPEVAEA 293 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVE------GKDILEMYENTRSIGFGQEVKHRIM 364 LP ++ + G YGL E GK + E RS G+++ Sbjct: 294 LPLSPVL-----------FTGEAYGLWREVIEAAPGKMFAPILERFRS---GKDISAADY 339 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + + RK+ L R A G D +L PT P P + + Sbjct: 340 VAGW--------------RKLEAL--RAVWNARVAGYDAVLMPTAPN--LPPDQVRLLAD 381 Query: 425 SMGHIYNDVFTV----AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ ++ T+ N+ GL A+++P + GL L GQP+ EE L V Q + Sbjct: 382 PDYYVTENLLTLRNTRVANLLGLCAVTLPTGVPS----CGLTLCGQPYAEERLLRVAQAV 437 Query: 481 E 481 E Sbjct: 438 E 438 >gi|224136372|ref|XP_002322313.1| predicted protein [Populus trichocarpa] gi|222869309|gb|EEF06440.1| predicted protein [Populus trichocarpa] Length = 540 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM++ E + +R+K I+++ELV ++Q ++ N + + I + A A+E+D+ Sbjct: 81 DIAFMSILELGELIRTKQITSLELVQIFLQRLKRYNPVLESVITYTDELAYKQAKEADEL 140 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD G T S + E+ V ++L GAV++ K Sbjct: 141 LAKGVYLGPLHGIPYGLKDIIVVPGYKTTWGSGSFKDQVHNIEAWVYKRLKSAGAVLVAK 200 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 201 LVSGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 252 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++PT+G R G++S A SLD+ G R+ D ++L I G D Sbjct: 253 GSITYPAARCGVTALRPTFGTVGRTGVMSIAESLDKLGPFCRSAEDCTVVLDTIRGKDPD 312 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + +P+ D I+ +TVG D + ++ LK G V Sbjct: 313 DPSSRYIPLDD---PFSVDIKRLTVGY------------TDDAEMEVVNVLKSKGVNTVP 357 Query: 302 ISLPHT 307 L +T Sbjct: 358 FKLNYT 363 >gi|222102507|ref|YP_002539546.1| hypothetical protein Avi_7127 [Agrobacterium vitis S4] gi|221739108|gb|ACM39841.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 436 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 131/461 (28%), Positives = 194/461 (42%), Gaps = 61/461 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S ++ S I+ IE +S + AY + AAA+ D G L G+PI IKD Sbjct: 23 LSVTDIATSIIRRIEERDSAVRAYAHFDPTQVLAAAQMLDAAPHKGP---LHGVPIAIKD 79 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 TK + TQ S G +P ++ L GA+++GK EFA T+ G Sbjct: 80 VINTKDMPTQHNSARYHGHQPGMDAACVDTLRQAGALLIGKTVTTEFA------TTNRGS 133 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 V + TPGGSS GS+AAVA F ++GT TGGS +PASF G G KPT+ Sbjct: 134 VTRNPHDL----ACTPGGSSSGSAAAVADFQATLALGTQTGGSTIRPASFCGIYGFKPTW 189 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 SR G+ ++ + D G+ R+ D A+L A DAT E AL Sbjct: 190 NAISREGLKMYSATCDTLGLYGRSADDLALLADVFA----LDAT---------ETALADD 236 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT-QYALPAYYIISP 319 + G +G+ + I LK AGA + +I+LP L A++II Sbjct: 237 LAGKRIGVCLSPAWPKAELATQQAMNTAIDALKQAGAVVSDIALPAMFDGILAAHHIILR 296 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 E S L E K I+ EN ++I Q Y L+ +C Sbjct: 297 REGRSAFLNEANATPDLHDELKAIV---ENRQAITPSQARD------AYRLADQC----- 342 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 R + DVILTP++ T P G E I+N ++T Sbjct: 343 -----------RAAFDDIAASYDVILTPSS-TGEAPRGIETTGDA----IFNSIWT---- 382 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + +P ++VP P+G+ L Q +++ + + ++ Sbjct: 383 LMQVPVVNVPGLYGPNGRPVGVSLTAQRYQDRKVIAYADLL 423 >gi|147861793|emb|CAN80909.1| hypothetical protein VITISV_016638 [Vitis vinifera] Length = 514 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 137/500 (27%), Positives = 219/500 (43%), Gaps = 63/500 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRIINGDARDLEGIPI 76 +++ +LV+ Y+ I + ++ IEV + Q +A E K ++ L GIPI Sbjct: 48 LTSRQLVEFYLGEIFRLSPLLHGVIEVNPDALYQADKADRERKAKSPVSRSV--LHGIPI 105 Query: 77 GIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD TK ++T A S L ++ V KL GA++LGK ++ E+A N Sbjct: 106 LLKDNIGTKDKLNTTAGSFALLKSVVPRDAGVVMKLRKAGAIILGKASLSEWA----NFR 161 Query: 136 SYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S P R + + TP GSS GS+ +VA L A S+GT+T GSI PASF Sbjct: 162 SLNAPPGWSARGGQGLNPYVLSATPCGSSSGSAISVAANLVAVSLGTETDGSILCPASFN 221 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 VGIKPT G SR G++ +P D G I RTV D+ +L AI G+D DA Sbjct: 222 SVVGIKPTVGLTSRAGVVPVSPRQDTIGPICRTVLDAVQVLDAIVGFDYNDAEATREASK 281 Query: 248 -LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIV-EIS 303 +P Y++ L ++G +GI + S + + ++ L+ GA +V ++ Sbjct: 282 YIPYGGYKQFLKPYGLKGKRLGIVRNPFFTTGSGAALTQAFEHHFYTLRQEGAVLVDDLE 341 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IGFGQEVKH 361 + + L A S EA++ LA + + L KD++ + + I F Q+ Sbjct: 342 IANINVILNA---TSSGEATALLAEF---KLSLNSYLKDLVASPVRSLADVIAFNQKFSD 395 Query: 362 RIMIGTY----VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-----GVDVILTPTTPTS 412 MI + L+++ + +K + + R + FE+ +D ++TP Sbjct: 396 LEMIKEFGQDIFLAAQATNGIGDVEKKALSNLARLSRDGFEKLMIENKLDALVTPGX--- 452 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 DV V + + G P ISVPA K +P G+ G E Sbjct: 453 -------------------DVAPV-LAIGGFPGISVPAGYDYKGVPFGICFGGLKGSEPK 492 Query: 473 LFSVGQIIEKEAGYFRPHKW 492 L + E+ +P + Sbjct: 493 LIEIAYGFEQATKIRKPPSF 512 >gi|107099191|ref|ZP_01363109.1| hypothetical protein PaerPA_01000202 [Pseudomonas aeruginosa PACS2] gi|254237561|ref|ZP_04930884.1| hypothetical protein PACG_03641 [Pseudomonas aeruginosa C3719] gi|126169492|gb|EAZ55003.1| hypothetical protein PACG_03641 [Pseudomonas aeruginosa C3719] Length = 485 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 224/502 (44%), Gaps = 48/502 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEES 59 ++EL + + +R+R + +S E++ +Y+ IE N ++NA + ++ A++ A+ Sbjct: 7 INELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFNPRVNALVSLLPAERLLEEADAR 66 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D + G+ R + G+P IKD T+GI T S + + P + + +++ GA++ Sbjct: 67 DGELARGEWRGWMHGLPHAIKDLSLTRGIRTTLGSPLYRDYIPERDGIMVERIRAAGAIL 126 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N EF +GS +G + ++ + GGSSGG++AA+A L + G+ Sbjct: 127 IGKTNTPEFGLGSQTYNPLFGATACAY-----DERLSAGGSSGGAAAALALHLVPVADGS 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAG 237 D GS+R PA+F +G +P+ GR F L G + R+VRD+A+LL AG Sbjct: 182 DMMGSLRNPAAFNNVIGFRPSQGRVPFDDSADLFFDQLGYEGPMGRSVRDTALLLSVQAG 241 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKD 294 D + P + L++ +G+ +G + LD P D + Q+ + + Sbjct: 242 ADRRAPLSIAEPGARFAAPLERDFEGIRLGWLGD--LDGYLPMQDGILQLCQRALGDFRS 299 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARY--DGVRYGLRVE-GKDILEMYENTR 351 G +I E +L L E L + G G+ + K L E Sbjct: 300 LGCEIEEANLGFAPERL--------WECWRTLRHWLVAGSLGGVHADPAKRALLKPEAL- 350 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 EV++ + +G + RA IR+ R FE+ D +L P+ Sbjct: 351 -----WEVENGLRLGADAV---------FRASVIRSDWYRAIGRLFER-YDYLLLPS--A 393 Query: 412 SAFPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 FP KE S+ + D + V +++G P +V A + +P+GLQ+IG Sbjct: 394 QVFPFAKETPWPRSIEGVAMDTYHRWMEVVVPGSLSGCPVANVQAGFNAEGLPMGLQIIG 453 Query: 466 QPFREETLFSVGQIIEKEAGYF 487 + + + E+ + +F Sbjct: 454 PHQADFAVLQLAHAYERASRWF 475 >gi|171682542|ref|XP_001906214.1| hypothetical protein [Podospora anserina S mat+] gi|170941230|emb|CAP66880.1| unnamed protein product [Podospora anserina S mat+] Length = 601 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 123/504 (24%), Positives = 213/504 (42%), Gaps = 83/504 (16%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYI----QAIENSNSQMNAYIEVVAQKARAAAEE 58 E + +V + R S I+ +++ ++ + + I+N++ A+ +V ++ A+A E Sbjct: 111 EAKYYSVEDYRKLYLSGAITPLDVAEALLPLIRRDIQNASEHSIAFFQVRTERVLASARE 170 Query: 59 SDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHIL--DGFRPHYESTVTQKLWDNG 115 S R G + L+G+P +KD + +G T S + D S Q++ G Sbjct: 171 STLRYKEGRSLGPLDGVPTAVKDEYDMEGYSTTLGSPNVYADSSTNKTTSWCVQQIEAAG 230 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A++LGKL+M EF + ++ +YG +P S + GGSS G++ AVA L Sbjct: 231 ALILGKLSMHEFGLDTTGNNPHYGTPRNPHNS-----NYYTGGSSSGTAYAVAAGLIPIG 285 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA------GIITRTVRDSA 229 +G+D GGSIR P+S G G+KPT+GR +SF P + G I + A Sbjct: 286 LGSDGGGSIRIPSSLCGIYGLKPTHGR------LSFRPGPNHCVTCACLGPIAADMSSLA 339 Query: 230 ILLKAIAGYDECDATC-------VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 L I+ + LP PD + L GIP+ + + +P I Sbjct: 340 ALFSVISTPHSSSPFPPLPSPLKIQLPTPDDAKVL---------GIPQAW-ISQATPAIQ 389 Query: 283 KTWQQGI-SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 I + + G V +++P Q A+ + +A++ L Y + Y R+ Sbjct: 390 TLVNTLIRTLVSKHGYTTVPVTIPFLQEGQIAHAMTVLTDAATLLPEYKNLTYANRI--- 446 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 +L + T + + Y+ A+K+R L+ + +EQ Sbjct: 447 -LLALGRTTPA------------------------TDYMLAQKLRRLLMQHLAWLWEQHP 481 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYND--------VFTVAVNMAGLPAISVPAALC 453 +I+ TPT+A + +G + + ND F N GLP++S P Sbjct: 482 GMII--VTPTTACEGWEIRGGTGELRYGLNDGDRTMQSMEFVWLGNFCGLPSLSCPVGFV 539 Query: 454 EKK---MPLGLQLIGQPFREETLF 474 + K +P+G+ G+ E L Sbjct: 540 QGKGGEVPVGVMATGEWCSERELM 563 >gi|251794564|ref|YP_003009295.1| amidase [Paenibacillus sp. JDR-2] gi|247542190|gb|ACS99208.1| Amidase [Paenibacillus sp. JDR-2] Length = 692 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 129/451 (28%), Positives = 201/451 (44%), Gaps = 47/451 (10%) Query: 46 EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 E Q+AR A D+ G L GIPI IKD + TK + T S L+GF+P ++ Sbjct: 57 ETALQQARGA----DQARREGKTGQLLGIPIAIKDIYDTKDMPTTGGSKALEGFQPKADA 112 Query: 106 TVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSS 164 +KL + GAV++GK N EFA GS +E+ + + W ++ + T GSSGGS+ Sbjct: 113 YQVEKLREAGAVIIGKTNTSEFANSGSFSESGW----MQTWNALYPSK--TSFGSSGGSA 166 Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 +VA AA++GT TG S+ P + + T G S G+I D AG I R+ Sbjct: 167 VSVAASFAAAAMGTQTGVSLYAPTTGASLTAFRGTDGMASTRGVIPLTWGQDYAGPIARS 226 Query: 225 VRDSAILLKAIAGYDECDATCVNLPV---PDYERALD-QSIQGMTVG-IPKEYRLDYLSP 279 V D A LL A G D D D+ AL +++G +G IP + Y Sbjct: 227 VTDLAYLLNATTGTDPQDMLTQEADARRPEDWTAALSADALKGKRIGYIPSSFNSSYADD 286 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + +Q L AGA +VE+S P + PA S ARY + Sbjct: 287 GTGEAVKQHFDDLVKAGATMVEMSEPPSGGTRPA-----GNAGSEGWARYIELHDNFPFA 341 Query: 340 GKDIL-----EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 D L + N RS+ +V+ R M + V Y ++Y R I D+ Sbjct: 342 NGDELLASPKVLLYNQRSL----QVRPR-MTESQVQDYINYRTNYKR-------IIADWM 389 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT-VAVNMAGLPAISVPAALC 453 + ++ VD ++ + + NN + + +D T V + GLP + VP Sbjct: 390 DQYD--VDSVVYAGFISDVY------NNDSAASQLSSDRGTGVLTSNVGLPTVIVPVGTN 441 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + +QL+G+ + + + ++G +E++A Sbjct: 442 PNGYSISMQLMGKAWDDANVLAMGYALEQQA 472 >gi|21241080|ref|NP_640662.1| amidase [Xanthomonas axonopodis pv. citri str. 306] gi|21106376|gb|AAM35198.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas axonopodis pv. citri str. 306] Length = 470 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 127/473 (26%), Positives = 202/473 (42%), Gaps = 57/473 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 RS+ A L + I +N ++ A ++ +A A A + G D L G+P Sbjct: 37 RSQPTLAARLATQTLTRINQANDRLCAITRLLPARAAADAARVQAALAGGSDGGALAGVP 96 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T A + + P ++ V Q+L + GAV++G NMDEFA G + Sbjct: 97 FVVKDLFDVAGQVTTAGAAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEFAYGFATV 156 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P D+ GGSSGGS+AAVA L ++G+DT GSIR PA+ G Sbjct: 157 NAHYGTTANP-----HDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGIY 211 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PT+G G+ F +LD G +V D CV Y+ Sbjct: 212 GLRPTHGAVPLDGVFPFVDALDVVGPFATSV---------------ADLRCV------YD 250 Query: 255 RALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 Q + G + RL + +D + G+ L A + I LP + A A Sbjct: 251 VLRGQPLPSCHAGKLRVARLGGWFQRNLDPDLEAGLQALLAACNSLASIDLPEAERARAA 310 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ AE R+ R L G F + R++ G + +S Sbjct: 311 AFVLTAAEGGH---RH---RSALTAHGAQ------------FDPATRDRLLAGLQLPASA 352 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIY 430 D+H D A VDV++ P TP A + ++ + Sbjct: 353 VADAHRF------AQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDGLPVSARAN 406 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +FT + +A P ++ P ++PLG+QLI P RE+ LF++ +E++ Sbjct: 407 LGIFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFALAAQLERD 458 >gi|30261953|ref|NP_844330.1| amidase [Bacillus anthracis str. Ames] gi|47527217|ref|YP_018566.1| amidase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184794|ref|YP_028046.1| amidase [Bacillus anthracis str. Sterne] gi|65319238|ref|ZP_00392197.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Bacillus anthracis str. A2012] gi|165873194|ref|ZP_02217807.1| amidase family protein [Bacillus anthracis str. A0488] gi|167632900|ref|ZP_02391226.1| amidase family protein [Bacillus anthracis str. A0442] gi|167638307|ref|ZP_02396584.1| amidase family protein [Bacillus anthracis str. A0193] gi|170686397|ref|ZP_02877618.1| amidase family protein [Bacillus anthracis str. A0465] gi|170706011|ref|ZP_02896473.1| amidase family protein [Bacillus anthracis str. A0389] gi|177650908|ref|ZP_02933805.1| amidase family protein [Bacillus anthracis str. A0174] gi|190566465|ref|ZP_03019383.1| amidase family protein [Bacillus anthracis Tsiankovskii-I] gi|227815258|ref|YP_002815267.1| amidase family protein [Bacillus anthracis str. CDC 684] gi|229602829|ref|YP_002866325.1| amidase family protein [Bacillus anthracis str. A0248] gi|254684517|ref|ZP_05148377.1| amidase [Bacillus anthracis str. CNEVA-9066] gi|254734820|ref|ZP_05192532.1| amidase [Bacillus anthracis str. Western North America USA6153] gi|254741221|ref|ZP_05198909.1| amidase [Bacillus anthracis str. Kruger B] gi|254755475|ref|ZP_05207509.1| amidase [Bacillus anthracis str. Vollum] gi|254760011|ref|ZP_05212035.1| amidase [Bacillus anthracis str. Australia 94] gi|30256579|gb|AAP25816.1| amidase family protein [Bacillus anthracis str. Ames] gi|47502365|gb|AAT31041.1| amidase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178721|gb|AAT54097.1| amidase family protein [Bacillus anthracis str. Sterne] gi|164711068|gb|EDR16632.1| amidase family protein [Bacillus anthracis str. A0488] gi|167513608|gb|EDR88977.1| amidase family protein [Bacillus anthracis str. A0193] gi|167531712|gb|EDR94377.1| amidase family protein [Bacillus anthracis str. A0442] gi|170129013|gb|EDS97878.1| amidase family protein [Bacillus anthracis str. A0389] gi|170669473|gb|EDT20215.1| amidase family protein [Bacillus anthracis str. A0465] gi|172083369|gb|EDT68430.1| amidase family protein [Bacillus anthracis str. A0174] gi|190562600|gb|EDV16567.1| amidase family protein [Bacillus anthracis Tsiankovskii-I] gi|227007651|gb|ACP17394.1| amidase family protein [Bacillus anthracis str. CDC 684] gi|229267237|gb|ACQ48874.1| amidase family protein [Bacillus anthracis str. A0248] Length = 536 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 139/518 (26%), Positives = 227/518 (43%), Gaps = 90/518 (17%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ VA Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVAADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GT+T GSI PA+ VG++P+ GR SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAVGTETTGSIVAPAAQQSVVGLRPSLGRVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQ 286 A+ GYDE D + V D ER D SI G+ +G+ + +D + Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAE 356 Query: 287 QGISWLKDAGAKIVEI---------SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 + L+DAGA + + +L +Y E N+ Y + + Sbjct: 357 KIRKDLQDAGAILTDYIQLNNGGVDNLQTLEY-----------EFKHNVNDYFSQQKNVP 405 Query: 338 VEG-KDILEM--YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 V+ K+I+ ++ R I +GQ +I S+ D + + K++ Sbjct: 406 VKSLKEIIAFNKRDSNRRIKYGQ-----TLIEASEKSTITKDEFEKVVQTSQENAKKELN 460 Query: 395 EAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 + E+G+D ++ + EE V AV AG P ++VPA Sbjct: 461 KYLVEKGLDALVM---------INNEE------------VLLSAV--AGYPELAVPAGYD 497 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G +G+ F E+ LF++G E+++ +P K Sbjct: 498 NNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|312137789|ref|YP_004005125.1| amidase [Rhodococcus equi 103S] gi|311887128|emb|CBH46437.1| putative amidase [Rhodococcus equi 103S] Length = 446 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 113/403 (28%), Positives = 168/403 (41%), Gaps = 54/403 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAM 129 L GI + +KD G+ T+ S +L P + +L + GA+++ K ++ EFA Sbjct: 69 LHGIAVAVKDNIDVAGMPTRCGSAVLADAPPAANDARIVARLREAGAIVVAKTHLHEFAY 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + + GP P PGGSS GS+A VA + +IGTDTG S R PAS Sbjct: 129 GPTGAINASGPAAHP-----HDPNLVPGGSSSGSAALVAKGVVPVAIGTDTGCSTRTPAS 183 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+KP++ G + + D G++ V D ++ A+ G V P Sbjct: 184 LCGIVGMKPSFDALPTSGAFPLSTTFDHIGLLAADVLDVSLAWGALPGIAH-----VRTP 238 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 V G+ VG + D P I L DAGA+++++ LP T+ Sbjct: 239 V-----------AGLRVGRLRGANWDVADPAIAAAVDAACRALVDAGAEVLDVELPETEQ 287 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 L AY II+ +EA YE R + + R T Sbjct: 288 FLAAYPIITGSEA------------------------YETHRQ--WFEHAPERYQPATAA 321 Query: 370 LSSRCYDS---HYLRARKIRTLIKRDFTEAF--EQGVDVILTPTTPTSAFPLGKEENNSG 424 L D YL A + ++R E G+D ++T TTP A + + Sbjct: 322 LLDAQKDRPAVEYLHAARTVERLRRQALSRLRGELGLDALVTATTPLRAVSQEQALSADP 381 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 ++ + N G+PAISVPA E P+G+Q+IG P Sbjct: 382 AVARTPLLRMCIPFNALGIPAISVPAPGVEGD-PIGIQVIGLP 423 >gi|254721275|ref|ZP_05183065.1| amidase [Bacillus anthracis str. A1055] Length = 536 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 139/518 (26%), Positives = 227/518 (43%), Gaps = 90/518 (17%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ VA Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVAADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GT+T GSI PA+ VG++P+ GR SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAVGTETTGSIVAPAAQQSVVGLRPSLGRVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQ 286 A+ GYDE D + V D ER D SI G+ +G+ + +D + Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAE 356 Query: 287 QGISWLKDAGAKIVEI---------SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 + L+DAGA + + +L +Y E N+ Y + + Sbjct: 357 KIRKDLQDAGAILTDYIQLNNGGVDNLQTLEY-----------EFKHNVNDYFSQQKNVP 405 Query: 338 VEG-KDILEM--YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 V+ K+I+ ++ R I +GQ +I S+ D + + K++ Sbjct: 406 VKSLKEIIAFNKRDSNRRIKYGQ-----TLIEASEKSTITKDEFEKVVQTSQENAKKELN 460 Query: 395 EAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 + E+G+D ++ + EE V AV AG P ++VPA Sbjct: 461 KYLVEKGLDALVM---------INNEE------------VLLSAV--AGYPELAVPAGYD 497 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G +G+ F E+ LF++G E+++ +P K Sbjct: 498 NNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|126731044|ref|ZP_01746852.1| Amidase [Sagittula stellata E-37] gi|126708346|gb|EBA07404.1| Amidase [Sagittula stellata E-37] Length = 492 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 128/481 (26%), Positives = 208/481 (43%), Gaps = 61/481 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+S+++S EL+D+ + I +++ +NA + A++A AA D L G+P Sbjct: 26 LKSREVSTAELIDASLSRIAHTSPAINAMVTTCAERAHDAAPARDSL--------LAGLP 77 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +GIKD G+ T + L P + ++ GAV++GK N E G++ Sbjct: 78 VGIKDLTDVAGVRTTYGTPALADNVPKVSDPMVLRMEARGAVVIGKTNTPEMGAGANTFN 137 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + +G +PW + + PGGSSGG++A +A S G+D GGS+R PAS+ G VG Sbjct: 138 AVFGATRNPWDT-----RMNPGGSSGGAAAGLAAGEVWLSQGSDLGGSLRTPASYCGVVG 192 Query: 196 IKPTYGRCSRLGIISFAPSLDQ------AGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 ++P+ G+++ AP D G + R V D A+LL A+ G+D Sbjct: 193 LRPSP------GLVASAPGADGFNAFGVDGPMARNVADVALLLDAMTGFDPVS------- 239 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P S G + P R+ + SP + G++ + A+I+ ++ Q Sbjct: 240 -PLSHPPSTDSYLGACLAAPGPLRIAF-SPDLG-----GLAPVTTDIAEILSKAVVQVQA 292 Query: 310 ALPAYYIISPAEASSNLA----RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A A P + A R G+ +V K I + ++ T + I Sbjct: 293 ADIAVEEHQPETRGLDHAFRTFRALGMWTSHQVTPKRISDHFKPT--------LAENIRT 344 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNS 423 G + ++ R+R + R F DV+ P T + P E + + Sbjct: 345 GGTLTVDDIATANVTRSRLYAQM--RGLFGTF----DVLACPVTGLAPLPSEVEYPKEVA 398 Query: 424 GSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G Y D F GLPA+S+P +P+GLQLIG P E L V + +E Sbjct: 399 GRPCRDYLDWLSFAFLATTCGLPALSLPVGFTASGLPVGLQLIGSPRGEARLLQVARRLE 458 Query: 482 K 482 + Sbjct: 459 E 459 >gi|260460692|ref|ZP_05808942.1| Amidase [Mesorhizobium opportunistum WSM2075] gi|259033269|gb|EEW34530.1| Amidase [Mesorhizobium opportunistum WSM2075] Length = 475 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 132/507 (26%), Positives = 214/507 (42%), Gaps = 62/507 (12%) Query: 1 MSELN--FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA-AAE 57 MS+L+ +M E+ ++K +S VEL+ + I+ E + S +N ++A AA+ Sbjct: 1 MSDLDLCYMPAHEALRLFKAKKLSPVELMRATIRRAEATKSAINCLTFTHFEEAMGLAAK 60 Query: 58 ESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 K + LEG+PIGIKD KG T S + + ST+ +++ G + Sbjct: 61 AEAKYAKDARTGALEGLPIGIKDESYIKGKPTSHGSLLSKDTIGGHTSTMNERVIKAGGI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + + EF+ + +G +PW FTPGGSSGGS+A +A + + G Sbjct: 121 VHARTATPEFSCAGYTWSKRWGVTRNPWNR-----DFTPGGSSGGSAATLASGTSSIATG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD---QAGIITRTVRDSAILLKA 234 +D GSIR PAS G VG KP YGR +LD G + R VRD+ +L Sbjct: 176 SDIAGSIRIPASACGLVGFKPPYGRNPDEPPF----NLDFYCHTGPLARNVRDAILLQNV 231 Query: 235 IAGYDECDATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +AG D + P LD + I+G + + + P + K + Sbjct: 232 MAGPSPLDIATLR---PKLRLPLDYKPIKGWRIAFSMDLGSFEVDPDVRKNTLAACDVFR 288 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 GA + E+ L L A ++L++ L GKD M R Sbjct: 289 SLGATVEEVDLGWGNDVLKAGMAYLEHLFGASLSQL------LGKHGKD---MTSYARQF 339 Query: 354 GF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 GQ+ K + T ++++ Y + + L+ EA+ DV++ PT Sbjct: 340 AEDGQKSKATDFVATLDVAAKMYQT-------LGPLL-----EAY----DVLICPTNALP 383 Query: 413 AFPL------------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 A P GKE N S+G + F + M+ P +S+P+ +P G Sbjct: 384 AVPAEFDQTRDRVEINGKEVNP--SLGWVMTTPFNM---MSRCPVLSIPSGHAASGVPTG 438 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYF 487 +Q++G+ + + +F G E G + Sbjct: 439 IQIVGRTYSDADVFRAGLAYETARGQW 465 >gi|156042540|ref|XP_001587827.1| hypothetical protein SS1G_11068 [Sclerotinia sclerotiorum 1980] gi|154695454|gb|EDN95192.1| hypothetical protein SS1G_11068 [Sclerotinia sclerotiorum 1980 UF-70] Length = 437 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 8/237 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ ++++E L++ S+ ELV +YI+ IE N ++A EV + A A E D+ Sbjct: 27 KLDQISITEILQGLKNGHFSSEELVRTYIKRIEQVNLIVHAVSEV-NRNAIEIAREKDEE 85 Query: 63 IINGDAR-DLEGIPIGIKDCF-ATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVML 119 G AR L G+PI IK+ F T G+ T C+ L+ P E+T KL + GA++L Sbjct: 86 RSRGSARGSLHGVPILIKNLFFTTDGLKTTFGCTGFLEAI-PSIEATTVIKLREEGAIIL 144 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G N ++A ++ T + V + D+ P GSS GS+ A LCAA++G++ Sbjct: 145 GIANGSQWA--NNRCTPGWSAVGGQCLGIYFKDQH-PKGSSSGSAVGTALGLCAAALGSE 201 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 T GS+ PA + VGIKPT G SR G+ + S D G++ R+V+D+A++L IA Sbjct: 202 TSGSVILPAQRSAIVGIKPTVGMTSRYGMYLASDSQDTVGVLARSVKDAALILTVIA 258 >gi|302804462|ref|XP_002983983.1| hypothetical protein SELMODRAFT_119391 [Selaginella moellendorffii] gi|300148335|gb|EFJ14995.1| hypothetical protein SELMODRAFT_119391 [Selaginella moellendorffii] Length = 557 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L FM + E L+SK +++VELV + + ++ +S + A + + A+A + +DK Sbjct: 115 DLAFMTILELGALLKSKQVTSVELVKVFSERLKRYDSTLKAVVTYTEELAQAQSLAADKL 174 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S + E+ V +L + GAV++ K Sbjct: 175 LQQGTYLGPLHGIPYGLKDTIAVPGYRTTWGSTSFKDQFFNEEAFVYTRLKEAGAVLIAK 234 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S G ++A AG + A IG++T Sbjct: 235 LATGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSCGPAAATSAGTIPFA-IGSETA 286 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ TG +PT+G SR I+S + SLD+ G R++ D I+L + G D Sbjct: 287 GSISYPAARTGVTAFRPTFGMVSRWQIMSLSESLDKIGPFGRSIEDCTIVLDVLRGKDPR 346 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + N+ + D + +TVG + ++ + LK+ G K+V Sbjct: 347 DLSSKNIKLKD---PFSIDAKKLTVGYLPDAEMEV------------VRILKEQGVKMVP 391 Query: 302 ISLPHT 307 L ++ Sbjct: 392 FDLKYS 397 >gi|119946068|ref|YP_943748.1| amidase [Psychromonas ingrahamii 37] gi|119864672|gb|ABM04149.1| Amidase [Psychromonas ingrahamii 37] Length = 600 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 168/398 (42%), Gaps = 35/398 (8%) Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L GIP +KD + T A + ++ V L GA+++GK N+D+FA Sbjct: 66 KPLWGIPFAVKDNIDAVDMPTTAACKAF-SYIARQDAYVVSLLKQAGAILIGKTNLDQFA 124 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G + P +P ++D+ K PGGSS GS+ AVA S+GTDT GS R PA Sbjct: 125 TGLVGLRT---PYPAPKNAIDA--KLVPGGSSSGSAVAVAHGQVCFSLGTDTAGSGRIPA 179 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + VG+KPT G S G+I SLD I+ TV ++A + YD+ D Sbjct: 180 ALNNIVGLKPTLGSISSRGVIPACRSLDTVSILALTVENAAQVYACCRYYDQQDP----F 235 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + A TV +P L P K ++Q +++ + GAK+VEI Sbjct: 236 SKPYHGPAKQNIPVNFTVAVPDSESLILDEPAQKKAYEQALNYWRQKGAKLVEIDFK--- 292 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 P Y E S L Y+G R+ + RS + V I+ + Sbjct: 293 ---PFY------EVSKLL--YEGPWVAERLAA--LAPFMAKHRSALY--PVTCEIIESAH 337 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 S+ + Y R R + I T+ +DVI P+ P + E + G Sbjct: 338 KFSASDAFNAYYRLRALSRQIASILTK-----IDVICVPSMPGLVYKSDIEVDPIGPNSR 392 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + +T VN+ L AI++P P + LI Q Sbjct: 393 L--GTYTNFVNLLDLCAIAIPGKTRSDGYPSSITLIAQ 428 >gi|284042742|ref|YP_003393082.1| amidase [Conexibacter woesei DSM 14684] gi|283946963|gb|ADB49707.1| Amidase [Conexibacter woesei DSM 14684] Length = 485 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 144/495 (29%), Positives = 219/495 (44%), Gaps = 48/495 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL + + + + D+S+ EL + + IE + +NA+ V A+ A A+E+D+R Sbjct: 11 ELAYAGLQTLAALVAAGDVSSRELTELSLGRIETAQPTLNAFRCVRAEAALHEADEADRR 70 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYE-STVTQKLWDNGAVMLG 120 G++ L G+P IKD G T CS D P E VT++L GAV++G Sbjct: 71 RAAGESLPLLGVPFAIKDDMDIAGEATPFGCSGTFD---PRGEDGEVTRRLRAAGAVIVG 127 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K E E +G +PW STD TPGGSSGGS+AAVA L ++G+D Sbjct: 128 KTTTPELGQWPFTEGPAFGATRNPW----STDH-TPGGSSGGSAAAVAAGLVPGAVGSDG 182 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA++T VG+KP GR S L G +TRTV D+A+LL ++G + Sbjct: 183 AGSVRIPAAWTHLVGVKPQRGRISTWPDPDPFNGLTCIGTLTRTVDDAALLLDLLSGSHD 242 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D P + RA ++ + + + +D + + L+ AG V Sbjct: 243 DDVHRPPPPTESFLRAARRAPGRLRIALSLRIPFSAAPTRLDAAVRARV--LRLAG---V 297 Query: 301 EISLPH-TQYALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQE 358 L H + A P Y ++ +S + R G GL G+ + E Sbjct: 298 LAGLGHDVEIADPVYGLVG----ASFIPRAMG---GLGDWAGRHVAEPQH------LDAR 344 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 +H I +G R AR + R F + DV+L PTT P+G Sbjct: 345 TRHAIAVG------RRLRPLLGAARALERPFARQVGRVFRR-FDVVLAPTTAQPPRPIGS 397 Query: 419 EENNSGSMGHIYNDVFTVAV-------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + +G+ D V N+ G P+++VPA L + +P+G QL+G E Sbjct: 398 IDG----LGNWDTDKVMVGACPYAWPWNVLGWPSVNVPAGLTDDGLPVGAQLMGPANSEP 453 Query: 472 TLFSVGQIIEKEAGY 486 L S+ +E E + Sbjct: 454 RLLSLAAQLEAEEDW 468 >gi|229184159|ref|ZP_04311368.1| Amidase [Bacillus cereus BGSC 6E1] gi|228599274|gb|EEK56885.1| Amidase [Bacillus cereus BGSC 6E1] Length = 536 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 142/518 (27%), Positives = 223/518 (43%), Gaps = 90/518 (17%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIEDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ VA Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVAADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 +IGT+T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAIGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQ 286 A+ GYDE D + V D ER D SI G+ +G+ + +D + Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAE 356 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + L+DAGA + E YI NL + Y + D Sbjct: 357 KIRKDLQDAGAILTE-------------YIQLNNGGVDNLQT---LEYEFKHNVNDYFSQ 400 Query: 347 YENT------RSIGFGQE-VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +N I F +E K RI G ++ + ++ I +D FE+ Sbjct: 401 QKNVPVKSLEEIIAFNKEDSKRRIKYGQTLIEASE-----------KSAITKD---EFEK 446 Query: 400 GVDVILTPTTPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 V TS KE E + ++ I N+ ++ +AG P ++VPA Sbjct: 447 VVQ--------TSQENAKKELDSYLVEKDLDALVMINNEEVLLSA-VAGYPELAVPAGYD 497 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G +G+ F E+ LF++G E+++ +P K Sbjct: 498 NNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|326388683|ref|ZP_08210276.1| amidase [Novosphingobium nitrogenifigens DSM 19370] gi|326206934|gb|EGD57758.1| amidase [Novosphingobium nitrogenifigens DSM 19370] Length = 587 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 121/423 (28%), Positives = 186/423 (43%), Gaps = 42/423 (9%) Query: 54 AAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLW 112 A A D RI G+ L G+P IKD G+ T A C + P +TV +L Sbjct: 54 AMARAVDARIAAGEVLPLAGVPFAIKDNIDLAGVPTTAGCPEF--AYDPVQSATVVARLI 111 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GAV +GK N+D+FA G + S YG +P + + GGSS GS+ AVA L Sbjct: 112 AAGAVPIGKTNLDQFATGLNGTRSPYG---AP--ACVHNRAYVSGGSSSGSAVAVAAGLV 166 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A ++GTDT GS R PA+F G +G KPT GR S G++ SLD + T D+A++ Sbjct: 167 AFALGTDTAGSGRVPAAFNGLIGFKPTKGRWSTAGLVPACRSLDCITVFTHRASDAALVD 226 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISW 291 +AG+D D P + ++ + +G+P+ + +L T ++ + + Sbjct: 227 AVVAGHDPAD--------PWSRESAERGLDPRRIGVPRPDQRQFLGDTASERLYMAALDR 278 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L GA++VEI L +P ++ L YDG R L + R Sbjct: 279 LAAMGAELVEIDL-------------APLSEAARLL-YDGPWVAERTAA---LREFLEAR 321 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 F V+ + G +V + Y R R EA + VD + PT PT Sbjct: 322 PEAFDPTVRTIVESGLHVGGVETFRGIY------RLAELRQQAEAMWERVDCLCLPTAPT 375 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + L + ++ + ++T VN+ + AI+VP G+ +IG + + Sbjct: 376 -IYRLAEMRAAPIALNSVLG-LYTNFVNLLDMAAIAVPGGWRANGTGFGVTMIGPAWTDC 433 Query: 472 TLF 474 L Sbjct: 434 ALL 436 >gi|206977450|ref|ZP_03238345.1| amidase family protein [Bacillus cereus H3081.97] gi|206744300|gb|EDZ55712.1| amidase family protein [Bacillus cereus H3081.97] Length = 536 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 132/493 (26%), Positives = 224/493 (45%), Gaps = 54/493 (10%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +NA E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNAVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTSKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + YD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRSGIIPLAETLDTAGPMARTVKDAATLFNIMVSYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + DY + L ++G VG+ + +D + Q+ L+DA Sbjct: 308 EKDAMTEKMKDKERMDYTKDLSIDGLKGKKVGVL--FSIDRQDDNRKEVAQKIRKDLQDA 365 Query: 296 GAKIV-EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA + +I L AE NL + Y + D L +N Sbjct: 366 GAILTDDIQL--------------NAEGVDNLQT---LEYEFKHNVNDFLSKQKNVPVKS 408 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSA 413 + +++ DS+ R + +TLI+ A ++G + ++ + + Sbjct: 409 LEE-----------IIAFNKKDSNR-RIKYGQTLIEASEKSAITKEGFENVVQTSQENAR 456 Query: 414 FPLGKE--ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 L + E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F E+ Sbjct: 457 KELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQFGEK 515 Query: 472 TLFSVGQIIEKEA 484 LF++G E+++ Sbjct: 516 ELFNIGYAYEQQS 528 >gi|323489779|ref|ZP_08095004.1| amidase [Planococcus donghaensis MPA1U2] gi|323396517|gb|EGA89338.1| amidase [Planococcus donghaensis MPA1U2] Length = 482 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 142/499 (28%), Positives = 221/499 (44%), Gaps = 52/499 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+ M ++E + + S +++ ELV Y + I N NA +E+ A + Sbjct: 12 TRLDEMTIAEMQQEMTSGHLTSEELVLMYKETISVRNKDTNAILEINPDALPVAQALDFE 71 Query: 62 RIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAV 117 R G L GIPI +KD T +HT A S F HY ++ + ++L GAV Sbjct: 72 RQQTGPRSMLHGIPILLKDNIDTADKMHTSAGSL---AFENHYALRDAKIVERLRQAGAV 128 Query: 118 MLGKLNMDEFA-MGSSNETSYY----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 +LGK NM E+A S N T+ Y G V +P+ D SS GS+AA+A L Sbjct: 129 ILGKTNMTEWANFMSENMTNGYSSRGGQVKNPYGEFDVGG------SSSGSAAAIASNLA 182 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 AA+IGT+T GSI PA+ VGIKPT G SR GII + + D G I RTV D+ LL Sbjct: 183 AAAIGTETSGSIINPAAQNSLVGIKPTVGLTSRTGIIPISHTQDVPGPIARTVADAVALL 242 Query: 233 KAIAGYDECDA-TCVNLPVPDY---ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 + I G D DA T + P +Y + + + G+ + + + ++ + +++ Sbjct: 243 EGIVGVDSQDAITALAKPFENYNWSKHLKKEGLNGVKLAVARSL-FKEITAEQAELFEKA 301 Query: 289 ISWLKDAGAKIV-EISLPHTQYALPAYYIISPAEASSN-LARYDGVRYGLRVEGKDILEM 346 + L+D GA+I+ +I+L Q L ++ + N +R I Sbjct: 302 LMTLRDCGAEIIDDINLGVHQEDLGFAVLLHEFKVDLNAYLEQSNPNQPIRSLTDVIAFN 361 Query: 347 YEN-TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVI 404 E+ R++ FGQ + + + L+ R Y R R + +R + E+ G D + Sbjct: 362 REHPERTLKFGQNLLEQANELSGTLTERAYVEALERNRFLAA--ERGMKKTLEEVGADAL 419 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 + P N G+ AG P+I+VP + P G+ Sbjct: 420 VLPQEYGC---------NIGA--------------AAGFPSITVPFGYEQTGQPFGITFS 456 Query: 465 GQPFREETLFSVGQIIEKE 483 GQ F E L E++ Sbjct: 457 GQAFTEPVLIEYAYAFEQQ 475 >gi|167574552|ref|ZP_02367426.1| amidase [Burkholderia oklahomensis C6786] Length = 528 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 150/478 (31%), Positives = 230/478 (48%), Gaps = 48/478 (10%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I I+ ++NA IE+ A A A D G R L G+ + +KD AT + Sbjct: 60 IARIDRDGPRLNAIIEL-NPDAEAIARALDAERGAGAVRGPLHGVTVALKDNIATGDRMA 118 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 119 TTAGSLALDGVHATRDAHLVARLRRAGAVVVAKTNLSEWANFRSTRSTSGWSARGGLSRN 178 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+ AVA L A ++GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 179 PYALDRTT-SGSSSGSAVAVAAGLVAMAVGTETDGSIVSPAAINGCVGLKPTVGRVSRDG 237 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG ITRTVRD+A LL A+AG D D+ T DY ALD +++G Sbjct: 238 IVPLSQTQDTAGPITRTVRDAARLLAALAGGDANDSATADAPAPADYVGALDANALRGAR 297 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQY--------------A 310 +GI + Y + +D ++ I+ +K GA +++ + LP Y Sbjct: 298 IGIARAYFTGH--DEVDAQIERAIAEMKRLGAVVIDPVDLPKPDYEDDEKTVLLHEFKHG 355 Query: 311 LPAYY-IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 LP + +P LA D + + E + EM FGQE+ R + Sbjct: 356 LPLWLRTFAPHARVRTLA--DVIAFN---EAQHAREMPY------FGQELLLRAQEAGGL 404 Query: 370 LSSRCYDSHYLRARKIRTL-IKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 ++ D+ R+ R + R EQ +D ++ PT T A+ + +SGS Sbjct: 405 DAAAYRDALDRCGRRARDEGLARVLR---EQRLDALVAPTEGT-AWLIDLINGDSGS--- 457 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 D F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G E+ A + Sbjct: 458 ---DGFSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAFEQAARW 511 >gi|295699738|ref|YP_003607631.1| amidase [Burkholderia sp. CCGE1002] gi|295438951|gb|ADG18120.1| Amidase [Burkholderia sp. CCGE1002] Length = 480 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 144/509 (28%), Positives = 235/509 (46%), Gaps = 65/509 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++E++ + +++ +LV + ++ I+ +NA + V A+ A AAA +D + +G Sbjct: 11 LTIAEAQMAFKDGRMTSTQLVQACLERIDEGK-HLNALVTVDAEGALAAAAAADAQRASG 69 Query: 67 DAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 AR L GIPI IKD + GI A + F P ++ +L GA++LGK NM Sbjct: 70 -ARLGPLSGIPIVIKDNIHSAGIRCTAGTPAFAEFVPATDAPTVARLRAAGAIVLGKTNM 128 Query: 125 DEFAMGSSNETSYY--GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 E A G++ + GP + DST GGSS GS A+ + A++GTDTGG Sbjct: 129 HELAYGATGYNGAFNTGPNRGVRNAYDSTR--VAGGSSSGSGTALGARMALAALGTDTGG 186 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R P S G ++PT R S G+I A S D G + + D A+L + I G E Sbjct: 187 SMRIPPSLNGVPSLRPTQDRYSGTGVIPIAKSRDTVGPMALAMTDVALLDEVITGESE-- 244 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 LP + S+ + GIP E+ ++ L + +Q LK G VE+ Sbjct: 245 -----LP--------NLSLHELRFGIPAEFWVN-LDEDTRELAEQAKEKLKALGVTFVEL 290 Query: 303 SLPHTQYALPAY-----YIISPAEASSNLARY---DGVRYGL-----RVEGKDILEMYEN 349 + L A + + E+ S++ Y +G R + +++ D+ +YEN Sbjct: 291 G----ESGLAALNAEVGFQVVIGESRSSMTEYLEENGHRMTIEQMASKIDSPDVKWIYEN 346 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI---RTLIKRDFTEAFE-QGVDVIL 405 G K + G V + YDS A+ + R ++ + E F+ +D ++ Sbjct: 347 WVLPG-----KFPVAQGELVDVAPLYDS----AQAVGGGRDKLRARYNEMFDTHALDAMM 397 Query: 406 TPTTPTSAFPLGK----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLG 460 PTT A PL EE N H+ + +A AGLP I+VP + MP+G Sbjct: 398 FPTTACVA-PLADDSIYEEEN---FRHLIQNTEPMAS--AGLPGINVPIGRGSRTGMPVG 451 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRP 489 ++ G+ + + ++G ++E G RP Sbjct: 452 MEFDGRRGSDRRMLAIGILLESVFGRVRP 480 >gi|256391773|ref|YP_003113337.1| amidase [Catenulispora acidiphila DSM 44928] gi|256357999|gb|ACU71496.1| Amidase [Catenulispora acidiphila DSM 44928] Length = 483 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 140/492 (28%), Positives = 219/492 (44%), Gaps = 47/492 (9%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 ++++ EL + I IE + +NA +ARAAA +D+ G+ R L GIP+ +K Sbjct: 19 EVTSGELTEEAIARIERDDKVINAICVPDFDRARAAARAADQARARGEDRPLLGIPVTVK 78 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 + + G+ T + P +S +L D GAV+LGK N+ + YG Sbjct: 79 ESYNMAGLPTTWGMPHHGNYMPAEDSVQVSRLKDAGAVILGKTNVPLGLQDIQSFNEIYG 138 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW D T T GGSSGGS+AA+A A SIG+D GS+R PA F G KP+ Sbjct: 139 TTNNPW---DHTR--TSGGSSGGSAAALASGFGALSIGSDLAGSLRTPAHFCGVYSHKPS 193 Query: 200 YGRCSRLGII-SFAPS----LDQA--GIITRTVRDSAILLKAIAGYDEC---DATCVNLP 249 G G++ AP+ LD A G + RT RD +LL +AG D A + LP Sbjct: 194 LGLVPSRGMVPPSAPALPVDLDLAVVGPMARTARDLTLLLDVMAGPDPLTYGTAYQLALP 253 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS--LPHT 307 +ER D V + +E+ + + L D GA++ S LP Sbjct: 254 PARHERLSD-----FRVLVLEEHPFLPTGSAVRAGVNRVADALADGGARVERHSPLLPDL 308 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 Y + S ++AR+ ++ YE R+ + + + Sbjct: 309 TEGATLYAQLL---FSGSVARFP-------------VDAYERLRTRAAALSPEDQSLDAA 352 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN------ 421 + + ++ A R L + + + F + D ++ P TPT AFP N Sbjct: 353 RLRAMVFSHRDWMEANDRRELHRHGWRQFFAE-FDAVVCPITPTPAFPHDHNPNPLERWI 411 Query: 422 NSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + Y D V+ M GLPA +P L + +P+G+QLIG F + T S+ ++ Sbjct: 412 DIDGVDFPYFDQLVWAGLPTMPGLPATVIPTGLSPEGLPVGVQLIGPMFEDRTPLSLAEL 471 Query: 480 IEKEAGYFRPHK 491 +E++ G FRP + Sbjct: 472 LEQKIGGFRPPR 483 >gi|77465526|ref|YP_355029.1| amidase [Rhodobacter sphaeroides 2.4.1] gi|77389944|gb|ABA81128.1| Amidase [Rhodobacter sphaeroides 2.4.1] Length = 490 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 132/503 (26%), Positives = 214/503 (42%), Gaps = 62/503 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L +++ ++ R++ IS VE+V + IE S +NA ++A A S+K Sbjct: 17 TPLAYLSAAQLTALYRARKISPVEVVTDALARIEASGDSLNAVCFTYPEEALEEARASEK 76 Query: 62 RIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R ++G + ++GIP +KD G T S + + V Q+L + GAV+ Sbjct: 77 RYMSGAQKPGMIDGIPAALKDETMMAGKVTTYGSLLYADHVAAKSAPVVQRLVEAGAVIH 136 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + EF+ + +G +PW FTPGGSSGGS AA+A L + G+D Sbjct: 137 ARTTTPEFSCAPFCHSRQWGVTRNPWNL-----AFTPGGSSGGSGAALAAGLAPLATGSD 191 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PAS +G VG KP YGR + P + G + RTV D ++ +AG Sbjct: 192 IGGSIRIPASASGVVGFKPPYGRVPSTPPFNLDP-YNHPGPMARTVEDCLLMQNVLAGPH 250 Query: 240 ECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + P E LD+S ++G + ++ + P + + + GA+ Sbjct: 251 PEDIASLK---PKLELRLDRSGVKGWKIAYSLDFGFMEIDPAVRANTLAALDVFRALGAE 307 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVR------YGLRVEGKDILEMYENTRS 352 + E++LP + A A + LA Y R Y R +D L TR Sbjct: 308 VTEVALPWSWEVYRAAATHHKALFGAWLAEYLDEREERLTSYARRF-ARDALAT--TTRD 364 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G E++ RI SH+ +G D+ L PT Sbjct: 365 YLAGMEIEGRIW------------SHF---------------GPMMEGFDLFLCPTLAIP 397 Query: 413 AFP----------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 A P + EE +S +G F + ++ P +S+P+ +P G+Q Sbjct: 398 AVPAEFDFSDPLIINGEEIDS-YLGWTMAWPFNM---LSRCPVLSLPSGRAPNGVPTGIQ 453 Query: 463 LIGQPFREETLFSVGQIIEKEAG 485 L+G+ + ++++F+ G E G Sbjct: 454 LVGRTYEDQSVFTAGLAYETALG 476 >gi|220920541|ref|YP_002495842.1| amidase [Methylobacterium nodulans ORS 2060] gi|219945147|gb|ACL55539.1| Amidase [Methylobacterium nodulans ORS 2060] Length = 481 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 129/507 (25%), Positives = 221/507 (43%), Gaps = 59/507 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESD 60 S+L + ++ +RS+ +SA E++ +++ I N + A + + + A AE +D Sbjct: 5 SDLVTLHATDLAQAIRSRAVSAREVMQAHLDQIARFNPAVTAIVSLRDPELLLAEAEAAD 64 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + G R L G+P +KD +G+ S + P ++ +L GA+++ Sbjct: 65 RDLAAGRWRGPLHGLPHAVKDTSPAQGMPWTQGSPVFRSRMPEADAPYVARLRQAGAILI 124 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAAS 175 GK N+ EF +GS +GP + + + PG GSSGG++ A+A + + Sbjct: 125 GKTNVPEFGLGSHTVNPVFGP---------TRNAYDPGRSAGGSSGGAAVALALRMLPLA 175 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 G+D GS+R PA++ G +G++P+ GR F P L AG + R D +LL + Sbjct: 176 DGSDHAGSLRNPAAWNGVLGLRPSPGRVPLRTDEVFLPDLTVAGPMARCTADLGLLLSVM 235 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKD 294 AG D + + R + + G+ VG + + P + +QG++ L+ Sbjct: 236 AGPDPRLPQAIQEDPAPFARPQPRDLPGLRVGWLGDCGGHLATEPGVLDLCEQGLAVLEA 295 Query: 295 AGAKIVEISL---PHTQYALPAYYIIS---PAEASSNLARYDGVRYGLRVEGKDILEMYE 348 GA++ ++L P + A+ ++ A + L R R L+ E E+ E Sbjct: 296 RGARVEPLALGLDPEEVWQ--AWRVLRAWLAGGAQAPLWRDPQTRAALKPEAA--WEVEE 351 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 + F ++ + SR Y + LR FE VD++ P Sbjct: 352 GLKLDAFA-------ILEASAMRSRWY-AQVLR--------------LFET-VDLLALPA 388 Query: 409 TPTSAFPLGKEENNSGSMG-------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 FP EE + H + +V T+ MAG PAIS+PA + +P+GL Sbjct: 389 --AQVFPFPIEEAWPRRIAGRDMDTYHRWMEV-TIPATMAGCPAISLPAGRNQGGLPMGL 445 Query: 462 QLIGQPFREETLFSVGQIIEKEAGYFR 488 QLI E L SV E+ + R Sbjct: 446 QLIAPHRGEAALLSVAAAYEEATAFDR 472 >gi|33600211|ref|NP_887771.1| putative amidase [Bordetella bronchiseptica RB50] gi|33567809|emb|CAE31723.1| probable amidase [Bordetella bronchiseptica RB50] Length = 481 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 127/487 (26%), Positives = 199/487 (40%), Gaps = 48/487 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDK 61 EL + + +E R++ +S ++ + + ++ N +NAY + R AA + Sbjct: 10 ELAYASAAELARLYRARTVSPLDHARAVLAMVDRWNPVVNAYCHLDRTLTLREAAASEAR 69 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLG 120 + N +G+ GIKD +G T S +P E + +L + G V +G Sbjct: 70 WMNNAPLGPADGVTYGIKDILLARGAPTGYGSRAACVAQPATEDAPAAARLREAGGVFVG 129 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF + + G + W + + T GGSSGG++ A A + +GTD Sbjct: 130 KTTTSEFGWKGTADNLLTGATRNVWDT-----RLTSGGSSGGAACAAAAGMGTLQVGTDG 184 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PASF G VG+K T+GR +L G + R V D A L + I D Sbjct: 185 GGSTRIPASFCGIVGMKATFGRVPAWPAGPML-TLSNVGPMARNVADLACLQRIIGQPDP 243 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V P P +ERA S+QG+ +G+ D P + Q L GA+++ Sbjct: 244 RDWHAV--PAPRHERAPPASLQGLRIGL--HLDRDACDPEVAAVIGQAAERLAAQGARLI 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + LP DG +R ++ + Q Sbjct: 300 DTRLP-----------------------LDGCDSLIRTH-------WQAGAAWLVAQIPP 329 Query: 361 HRIMIGTYVLSSRCYDSHYLRARK-IRTLIKR----DFTEAFEQGVDVILTPTTPTSAFP 415 R + L + H L RT+I R + A D++LTPT P F Sbjct: 330 QRQALLDPGLQAAAARGHALPLPDYYRTMIGRQKLGETMAAHLAQFDLVLTPTVPILPFA 389 Query: 416 LGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 G+E + S + + +T N+ PAIS+PA +P+GLQL +++E L Sbjct: 390 AGREAPEGAASQDWLDWNPYTYPFNLTRHPAISLPAGFSTGGLPVGLQLAAGLYQDEWLL 449 Query: 475 SVGQIIE 481 V ++E Sbjct: 450 GVAALVE 456 >gi|226307216|ref|YP_002767176.1| amidase [Rhodococcus erythropolis PR4] gi|226186333|dbj|BAH34437.1| putative amidase [Rhodococcus erythropolis PR4] Length = 472 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 136/488 (27%), Positives = 206/488 (42%), Gaps = 45/488 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L S S+V ++ + IE + +NA+ V +KA A ESD+R+ G+ L G+P Sbjct: 20 LASGATSSVAATEATLSRIEATQPHLNAFKIVRREKALEEAAESDRRLALGERLPLLGVP 79 Query: 76 IGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD G T C D +S + ++L D GAV++GK N E Sbjct: 80 IAVKDDVDITGEPTAFGCPG--DFPAKTEDSEMVRRLRDAGAVIVGKTNSPELGQWPLTS 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G +PW + TPGGSSGG++AAVA L +A IG+D GSIR PA++T V Sbjct: 138 GSAFGYTRNPW-----SRHHTPGGSSGGTAAAVAAGLVSAGIGSDGAGSIRIPAAWTNLV 192 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP-DY 253 GIKP GR S L G + RTV D+A+LL AG + D ++ P P Sbjct: 193 GIKPQRGRISTWPDAEAFYGLTVNGPLARTVADAALLLDVAAGNHDGD---LHKPTPVTV 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A+ + + + + +D + + + D ++ H PA Sbjct: 250 SDAVGRDPGKLKIALSLRNPFTATPVKLDPEVRLAVHSIADTLRELGH----HVVVDDPA 305 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y +I +GL + ++ +++ + V R + + Sbjct: 306 YGLI----------------FGLNFLPRSLVGVHDWLGRVPDPTLVDARTRGNAQ--NGK 347 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 LRA + R A DV+L PTT A P G G + V Sbjct: 348 LLRGAPLRAARAAEPRMRKRIGAIFDTYDVVLAPTT---ATPPIMATAIDGIGGWDTDKV 404 Query: 434 FTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY- 486 T A N+ G P+++VPA + +P+G QL+G E L S+ +E + Sbjct: 405 MTGACPYAWPWNVLGWPSVNVPAGFSKAGLPIGAQLMGNENTEPLLVSLASQLESVLRWD 464 Query: 487 -FRPHKWW 493 RP WW Sbjct: 465 QVRPEPWW 472 >gi|229017258|ref|ZP_04174164.1| Amidase [Bacillus cereus AH1273] gi|229023431|ref|ZP_04179932.1| Amidase [Bacillus cereus AH1272] gi|228737879|gb|EEL88374.1| Amidase [Bacillus cereus AH1272] gi|228744048|gb|EEL94144.1| Amidase [Bacillus cereus AH1273] Length = 536 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 135/509 (26%), Positives = 218/509 (42%), Gaps = 72/509 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + S +NA E+ A + +R +N Sbjct: 73 VDELQKMVDDGKLSYEELTSIYLFRIQEHDQSGISLNAVTEINPDAMEVARKLDKERALN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVIVKDNIQTEKVMPTSAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS VG++P+ G SR GII A +LD AG + RTV+D+A L + YD Sbjct: 248 TTGSIVAPASQQSVVGLRPSLGMISRTGIIPLAETLDTAGPMARTVKDAATLFNTMVSYD 307 Query: 240 ECDATCVNLPVPD---YERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + D Y L ++G +GI + +D ++ ++DA Sbjct: 308 EKDAMTEKMKDRDRINYTNDLSIDGLKGKKIGIL--FSVDQQDENRKAVAEKIRKDIQDA 365 Query: 296 GAKIV-EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---- 350 GA + +I L +E NL + Y + D L +N Sbjct: 366 GAILTDDIQL--------------NSEGVDNLQT---LEYEFKHNVNDYLSKQKNVPVKS 408 Query: 351 --RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ R M Y + + + K +F + + Sbjct: 409 LEEIIAFNKKDSKRRM---------KYGQTLIEGSEKSAITKDEFEKVVQ---------- 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDSDGQPVGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +G+ F E+ LF++G E+++ R K Sbjct: 507 FVGKQFGEKELFNIGYAYEQQSKNRRSPK 535 >gi|78060157|ref|YP_366732.1| indole acetimide hydrolase [Burkholderia sp. 383] gi|77964707|gb|ABB06088.1| Amidase [Burkholderia sp. 383] Length = 500 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 129/500 (25%), Positives = 222/500 (44%), Gaps = 36/500 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAE 57 M L + ++E+R L ++ S V+ Y A+ +++ +N + V + A A Sbjct: 1 MPTLGTLTLTEARHALLRREFSCVD----YAYALIERHARWRYLNGFTCVDDARLLAEAA 56 Query: 58 ESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 D+ + + L G+PI IKD T + T + L P + V +L GA Sbjct: 57 RCDRDLATSATPHALLGLPIAIKDNIDTACLPTGNGTLALHNRVPPQHAPVVARLLAQGA 116 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++ GK N+ E A G S G V +P+ PGGSS GS A V + A++ Sbjct: 117 LIAGKANLHELAFGVSGNNRVTGAVRNPYDF-----NRIPGGSSSGSGALVGAGVVPAAL 171 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GTDTGGS+R PA+ G VG++PT GR G+ + + D G I R+V D A+L ++ Sbjct: 172 GTDTGGSVRIPAALCGAVGLRPTVGRYPSGGVAPISRTRDTVGPIARSVEDIALLDAILS 231 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G T VP + + + + + +P+ L+ ++ ++ L AG Sbjct: 232 GTGTGTGTGTGTGVP-TAMPMRSTTRPVRLAVPRTTFWRGLAQDVEMVANAAVAKLAQAG 290 Query: 297 AKIVEISLPHTQYALPAYY-----IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + V+I L Y P ++ +I+ E S++ Y V G + DI+ N Sbjct: 291 FECVDIDL--NDY--PGFFDDEPAVIAMVEFRSSMHAYL-VENGYDLSVDDIV---ANVG 342 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 S + +H + G + Y + R + R ++ ++ G D ++ PTT Sbjct: 343 SPDVAKIARH--ITGPDGIGEAAYRTALDRRTRSRAAYRQCLADS---GADALVFPTTIA 397 Query: 412 SAFPL--GKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +A P+ G +G+ +++ T + AG+P +++PA L +P+GL L G Sbjct: 398 TACPIPAGDAMILNGAPASVFSTYIRNTEPGSNAGIPGMTLPAGLTAAGLPVGLALDGAA 457 Query: 468 FREETLFSVGQIIEKEAGYF 487 + L +V +E+ G Sbjct: 458 GTDRELIAVALEVERVLGRL 477 >gi|302383546|ref|YP_003819369.1| amidase [Brevundimonas subvibrioides ATCC 15264] gi|302194174|gb|ADL01746.1| Amidase [Brevundimonas subvibrioides ATCC 15264] Length = 481 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 129/436 (29%), Positives = 208/436 (47%), Gaps = 42/436 (9%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A + G+PI +KD T+ + T A S L P ++ + +L + GAV+LGK N+ E+ Sbjct: 58 ADGITGMPILLKDNIETRDMPTTAGSLALANNAPGRDAPLVARLREAGAVILGKTNLSEW 117 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKF------TPGGSSGGSSAAVAGFLCAASIGTDTG 181 A S+ + IS W ++ + TP GSS GS+AAVA L A+IG++T Sbjct: 118 ANIRSSAS------ISGWSAVGGQTRNPYDFERTPCGSSAGSAAAVAIGLAPAAIGSETD 171 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PAS G VG KPT G SR I+ + S D AG I V +A +L A+AG D Sbjct: 172 GSITCPASVNGVVGFKPTVGLVSRTHIVPISHSQDTAGPIAMDVATAATVLTAMAGSDPA 231 Query: 242 DATC--VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + D+ ALD S++G +G+ + Y + S T++Q + L++ GA+ Sbjct: 232 DPATAEADAHTTDFRAALDAGSLKGARLGVLR-YLVGNYSAEAQATFEQALVALREQGAE 290 Query: 299 IVEISLPHTQYALPAYYIIS-----PAEASSNLARYDGVRYGLRVEGKDI-LEMYENTRS 352 +VEI+ + A +++ A+ ++ LA D + R I E + Sbjct: 291 LVEITTAPDTSGVGAGELMTLMTELKADLNTYLASTDPQQVPTRTLADVIAFNNAEPRET 350 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-----EQGVDVILTP 407 + FGQE + T + D YL AR T +++ E E V ++ P Sbjct: 351 VLFGQE-----LFITAEATKGLDDPAYLEARA--TALRQAGPEGIDRMMAENTVVALIAP 403 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +T + A+ ++++ G + +AG P ++VP L ++ MP+GL IG Sbjct: 404 ST-SRAWTNDPDDDDRG------QGSASRLPAVAGYPHLTVPMGL-DRGMPVGLSFIGGQ 455 Query: 468 FREETLFSVGQIIEKE 483 + + + S+G E+ Sbjct: 456 WDDAKILSLGYAYEQH 471 >gi|212528946|ref|XP_002144630.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Penicillium marneffei ATCC 18224] gi|210074028|gb|EEA28115.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Penicillium marneffei ATCC 18224] Length = 476 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 123/424 (29%), Positives = 192/424 (45%), Gaps = 53/424 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP +KD GI T AC + P + QK+ D G +++GK N+D+FA Sbjct: 84 LYGIPFSVKDSINVSGIPTTVACPSY--AYTPDRTAPAVQKILDAGGILVGKTNLDQFAT 141 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG +P DS + GGSS GS+ +V + S+ TDT GS R PAS Sbjct: 142 GLVGHRSPYG---TPRCVFDS--DYISGGSSSGSAVSVGSRQVSFSVATDTAGSTRVPAS 196 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+KPT G S +G+I + D +I R+V D+ K + GYDE D Sbjct: 197 LNGLVGLKPTLGTISTVGLIPACKTADCITVIARSVDDAREAWKVMKGYDEEDV------ 250 Query: 250 VPDYER----ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 Y R AL + IP L LSP+ + + I L+ + + + Sbjct: 251 ---YARKSIPALPSFPTTIRFAIPPSGLLSVLSPSYMQLFSHVIERLEQPDSGFQKCPIN 307 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +T P ++++++ + V +D L+ + G E H + I Sbjct: 308 YT-----------PFQSANDMLYGSSIVSQRLVAFEDYLKQH--------GMEKLHPV-I 347 Query: 366 GTYVLSSRCYDSHYLRARK---IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 T SS +D+ +RA + L KR F++ +DV++ P+T T F + + + + Sbjct: 348 KTIFESSSGFDA--VRAYQDIFDLALYKRQTVTQFQKSIDVLIVPSTVTH-FTVAEIQED 404 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK----MPLGLQLIGQPFREETLFSVGQ 478 + + FT VN+ L A+++P + MP G+ LIG+ R+ L +G+ Sbjct: 405 PIARNKLMGS-FTHFVNLLDLCAVAIPTGKWKNPKGNLMPFGITLIGEAGRDTELMKMGE 463 Query: 479 -IIE 481 IIE Sbjct: 464 RIIE 467 >gi|15595399|ref|NP_248893.1| amidase [Pseudomonas aeruginosa PAO1] gi|9946037|gb|AAG03591.1|AE004458_6 probable amidase [Pseudomonas aeruginosa PAO1] Length = 485 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 223/502 (44%), Gaps = 48/502 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEES 59 ++EL + + +R+R + +S E++ +Y+ IE N ++NA + ++ A++ A+ Sbjct: 7 INELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFNPRVNALVSLLPAERLLEEADAR 66 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D + G+ R + G+P IKD T+GI T S + + P + + +++ GA++ Sbjct: 67 DGELARGEWRGWMHGLPHAIKDLSLTRGIRTTLGSPLYRDYIPERDGIMVERIRAAGAIL 126 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N EF +GS +G + ++ + GGSSGG++AA+A L + G+ Sbjct: 127 IGKTNTPEFGLGSQTYNPLFGATACAY-----DERLSAGGSSGGAAAALALHLVPVADGS 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAG 237 D GS+R PA+F +G +P+ GR F L G + R+VRD+A+LL AG Sbjct: 182 DMMGSLRNPAAFNNVIGFRPSQGRVPFDDSADLFFDQLGYEGPMGRSVRDTALLLSVQAG 241 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKD 294 D + P + L++ +G +G + LD P D + Q+ + + Sbjct: 242 ADRRAPLSIAEPGARFAAPLERDFEGTRLGWLGD--LDGYLPMQDGILQMCQRALGDFRS 299 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARY--DGVRYGLRVE-GKDILEMYENTR 351 G +I E +L L E L + G G+ + K L E Sbjct: 300 LGCEIEEANLGFAPERL--------WECWRTLRHWLVAGSLGGVHADPAKRALLKPEAL- 350 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 EV++ + +G + RA IR+ R FE+ D +L P+ Sbjct: 351 -----WEVENGLRLGADAV---------FRASVIRSDWYRAIGRLFER-YDYLLLPS--A 393 Query: 412 SAFPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 FP KE S+ + D + V +++G P +V A + +P+GLQ+IG Sbjct: 394 QVFPFAKETPWPRSIEGVAMDTYHRWMEVVVPGSLSGCPVANVQAGFNAEGLPMGLQIIG 453 Query: 466 QPFREETLFSVGQIIEKEAGYF 487 + + + E+ + +F Sbjct: 454 PHQADFAVLQLAHAYERASRWF 475 >gi|300789198|ref|YP_003769489.1| amidase [Amycolatopsis mediterranei U32] gi|299798712|gb|ADJ49087.1| amidase [Amycolatopsis mediterranei U32] Length = 470 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 144/492 (29%), Positives = 217/492 (44%), Gaps = 55/492 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++VEL D I IE + +NA +ARAAA +D+ +G+ R L GIP+ +K+ Sbjct: 1 MTSVELTDEAIARIERDDKVINAICVPDFDRARAAALRADQARSSGENRPLLGIPVTVKE 60 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 C+ G+ T + P ++ +L GAV+LGK N+ + YG Sbjct: 61 CYDVAGLPTTWGLPPHRDYLPAEDAVQVARLKAAGAVILGKTNVPLGLQDIQSFNEIYGT 120 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +PW D+ T GGSSGGS+AA+A A SIG+D GS+R PA F G KPT Sbjct: 121 TTNPW----DPDR-TAGGSSGGSAAALAAGFGALSIGSDLAGSLRTPAHFCGVHAHKPTL 175 Query: 201 GRCSRLGII-----SFAPSLDQA--GIITRTVRDSAILLKAIAGYDECD---ATCVNLPV 250 G + G++ + LD A G + R+ RD +LL +AG D A + LP Sbjct: 176 GLTANRGMVAPTEPALPVDLDLAVVGPMARSARDLTLLLDVMAGPDPLTRGVAYELALPP 235 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS--LPHTQ 308 +ER D V + E+ L + ++ L D GA++ S LP Sbjct: 236 ARHERLGD-----FRVLVLDEHPLIATGAAVRAGVRRVADALVDGGARVERHSPLLPDLT 290 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS----IGFGQEVKHRIM 364 A Y + S ++AR+ L+ E R+ + E + Sbjct: 291 EAATLYMQLL---ISGSVARFP-------------LDTDEQLRTRVAGLSADDENLDAVR 334 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS- 423 + + S R + + R R +R FTE D ++ P TPT AFP N Sbjct: 335 LRALLFSHRDWLAANHRREVHRHGWRRLFTE-----FDAVVCPITPTPAFPHDHHPNPME 389 Query: 424 -----GSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + Y D F A M GLPA ++PA + +P+G+QLIG F + T + Sbjct: 390 RRIAIDGVEYPYFDQFVWAGLATMPGLPATAIPAGRSPEGLPVGVQLIGPMFEDRTPLRL 449 Query: 477 GQIIEKEAGYFR 488 +++E G FR Sbjct: 450 AELLEPATGGFR 461 >gi|39935566|ref|NP_947842.1| amidase [Rhodopseudomonas palustris CGA009] gi|39649419|emb|CAE27941.1| possible amidase [Rhodopseudomonas palustris CGA009] Length = 425 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 126/483 (26%), Positives = 210/483 (43%), Gaps = 72/483 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +AV + R +S + + S Q + + A+ + R E+ Sbjct: 5 LGLLAVHRA---FREGTLSPADYIASCTQRADEVEPWLKAFCD------RLPGEQ----- 50 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + G L GIPIGIKD AT GI T S + P ++ + ++ G ++ GK Sbjct: 51 LTGGEGPLAGIPIGIKDIIATAGIRTTNGSRVYADHVPDQDAPIVARIKQLGGIVFGKTV 110 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA GP ++P + + TPGGSS GS+AAVA + ++GT T GS Sbjct: 111 STEFAWRCP------GPTVNP-----NNPQHTPGGSSSGSAAAVAAGIVPMALGTQTVGS 159 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI-----AGY 238 + +PA++ G VG KP++G R G+ A SLD G +TR+V D+A + AG Sbjct: 160 VVRPAAYCGIVGFKPSFGAIVRDGVHPLAQSLDHVGFLTRSVEDAAFAFGLLADGADAGA 219 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 LPV + + +G+ + D +S ++ ++ + L+ GA Sbjct: 220 AAQAVAGDVLPV----------VSSLRLGVVRPPIWDRVSAEQNQAFETALETLRRGGAT 269 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV + LP + + A+ A ++ GL + D+ + Sbjct: 270 IVPLELPDRYWK--GFEAAEIILAAEAAAIFN----GLVTQHPDLTS-----------PQ 312 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 +K + G + + R Y+ AR+++ ++++F + G+D ILT P A P G Sbjct: 313 LKELVAAGNAISAPR-----YIEARQLQASLQQEFPQHLS-GLDGILTVPAPGEA-PEGL 365 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 S F M G+PA+++P A + +PLGLQ+IG + L + Sbjct: 366 AYTGDAS--------FCALWTMLGVPALTMPIARSARGLPLGLQVIGGFGEDAKLLRTAR 417 Query: 479 IIE 481 ++E Sbjct: 418 VVE 420 >gi|332707629|ref|ZP_08427657.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Lyngbya majuscula 3L] gi|332353538|gb|EGJ33050.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Lyngbya majuscula 3L] Length = 470 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 128/479 (26%), Positives = 206/479 (43%), Gaps = 57/479 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ----KARAAAEE 58 +L F + +R +IS +ELV Y++ IE N Q+ +Y V + A+A E+ Sbjct: 5 DLAFTPALDQAQLIRKGEISPLELVQLYLERIEGLNPQLGSYFTVASDMALVDAKAKTEQ 64 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH---YESTVTQKLWDNG 115 + G+PI IKD A +G+ C+ + F+ + Y+ V ++ G Sbjct: 65 LAETTDTSKLPPFFGVPIAIKDLRAVEGL---PCTFGVAAFKDNIAEYDDGVITRIKQAG 121 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 ++LGK E E + +PW ++D +TPGGSSGGS+AAVA L + Sbjct: 122 FIILGKTATSELGSLPYTEPPGFPAARNPW-NLD----YTPGGSSGGSAAAVAAGLSPIA 176 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 G+D GGS+R PA G V IKPT GR S + F + G + RTV D+A LL + Sbjct: 177 QGSDGGGSLRGPAFCCGLVAIKPTRGRISCAPVGDFQSGIASIGPMARTVADAAALLDVM 236 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKD 294 +GY D + P + A Q + + + + + S +K + + L+ Sbjct: 237 SGYITGDPYWLPDPEISFLEATHQQLDNLRISFATSIKPMGAASAVCEKIVVETMQRLEG 296 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G +VE P + DI+E ++ G Sbjct: 297 MG-HLVEPGCP---------------------------------DFSDIVEPFKTVWQAG 322 Query: 355 F---GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G ++ + ++ YL+A +I R F DV++ PT Sbjct: 323 VTSAGIPLEALSPMNRWIAEQSGSAGEYLQAVTKLQIIARQIV-GFFNNYDVLVLPTYLH 381 Query: 412 SAFPLGKEENNS--GSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +G+ ++ S ++ +I N + N GLPAI++PA EK +PLG+QL+G P Sbjct: 382 PPIRVGEWDDLSYEETLENIINWIGPCPPFNATGLPAIAIPAGFDEKGLPLGIQLVGPP 440 >gi|300117529|ref|ZP_07055316.1| amidase [Bacillus cereus SJ1] gi|298725064|gb|EFI65719.1| amidase [Bacillus cereus SJ1] Length = 536 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 222/501 (44%), Gaps = 56/501 (11%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ + L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKLLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVAADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ GR SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGRVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 E D + V D ER D SI G+ +G+ + +D + ++ L+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKEVAEKIRKDLQ 363 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 DAGA + + YI NL + Y + D +N Sbjct: 364 DAGAILTD-------------YIQLNNGGVDNLQT---LEYEFKHNVNDYFSQQKNVPV- 406 Query: 354 GFGQEVKHRIMIGTYVLSSRC-YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + +K I + R Y + A + T+ K +F + ++ + + Sbjct: 407 ---KSLKEIIAFNKRDSNRRIKYGQTLIEASEKSTITKDEFKK--------VVQTSQENA 455 Query: 413 AFPLGKE--ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 L K E ++ I N+ ++ +AG P ++VPA P+G +G+ F E Sbjct: 456 KKELNKYLVEKGLDALVMINNEEVLLSA-VAGYPELAVPAGYDNNGEPVGAVFVGKQFGE 514 Query: 471 ETLFSVGQIIEKEAGYFRPHK 491 + LF++G E+++ +P K Sbjct: 515 KELFNIGYAYEQQSKNRKPPK 535 >gi|229190048|ref|ZP_04317055.1| Amidase [Bacillus cereus ATCC 10876] gi|228593437|gb|EEK51249.1| Amidase [Bacillus cereus ATCC 10876] Length = 536 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 135/502 (26%), Positives = 222/502 (44%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG I RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPIARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKVVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I E NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSTEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ +++I + E FE V Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGSE-----------KSVITK---EEFENVVQ------ 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 L+G+ F E+ LF++G E+++ Sbjct: 507 LVGKQFGEKELFNIGYAYEQQS 528 >gi|186474731|ref|YP_001863702.1| amidase [Burkholderia phymatum STM815] gi|184198690|gb|ACC76652.1| Amidase [Burkholderia phymatum STM815] Length = 446 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 123/478 (25%), Positives = 216/478 (45%), Gaps = 56/478 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDKRIINGDARDLE 72 DR+R+ +SA E+ + + A + + +N +I A+ A A ++ K L Sbjct: 12 DRIRTGTLSAAEIRERILGA-DVRAATLNCFIRTCDAETYFARANDALK------GAPLF 64 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP +KD KG+ A + ++ ++++ +KL GAV+ GK NM E + G + Sbjct: 65 GIPFSLKDNICVKGLPVTAGTPGMEDCIAKRDASIVRKLKSLGAVVAGKNNMHELSFGIT 124 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + +G V++P + + GGSSGG +AAVA + +IGTDTGGS+R PA+F G Sbjct: 125 SVNPQWGTVVNP-----AAPEHLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPAAFCG 179 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G +PT GR S GII + + D G++T+T +D+ +L + + D+ +P Sbjct: 180 ITGFRPTSGRWSSAGIIPVSRTKDSPGLLTKTAKDAQLLYELLTPEDQ---------LPT 230 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT----- 307 ++ + I G+P + L + K + L AG + +E+ Sbjct: 231 KIKSTRRRI-----GLPASMWTE-LDDDVRKHCAHAVRRLTRAGFQCIELDDSAVAGLNK 284 Query: 308 --QYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGFGQEVKHRIM 364 + +P Y + D R L + I +++N R G +++ H + Sbjct: 285 AGTFTVPIYEFFT-----------DFPRTLLSLGWANRINTVFDNIRDTGV-RDIIHTNL 332 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G ++ SSR Y S +R + F+ +D + PT P P + G Sbjct: 333 AGKFI-SSRDYSSAIQSIAALRMQMNTLFS---NWDIDFLAYPTVP-RCVPRLIDAGRPG 387 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + T + A +P+I++P A +K +P+GL L ++ L + IE+ Sbjct: 388 LFADVIRN--TDLASNAAMPSITLPVAP-DKSLPVGLSLDAARGQDRRLLAAATCIEE 442 >gi|325676337|ref|ZP_08156016.1| amidase [Rhodococcus equi ATCC 33707] gi|325552898|gb|EGD22581.1| amidase [Rhodococcus equi ATCC 33707] Length = 472 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 122/486 (25%), Positives = 209/486 (43%), Gaps = 33/486 (6%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +M+ +E ++ SK +S E+ + I+ ++ N +NA + A + R A E + Sbjct: 4 SDPGWMSATEMAAQVASKSLSPNEIAEEMIRRVDEINPAVNAIVHFDADQVRRDAAELTR 63 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +G+ L G+P IKD +G+ T + ++ + +L G + LG Sbjct: 64 AQASGEQLGPLHGVPFTIKDLTDVRGLPTTFGLKPMRDNIAERDAVIVTRLRQAGGLYLG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N E + +GP +PW+ T GGSSGG++AAVA L + G+D Sbjct: 124 KTNTPESGYYGGTDNHLFGPTHNPWKP-----GHTAGGSSGGAAAAVAAGLGPLAEGSDG 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R P++ G VG+KPT G + + + G ITRTV D+A++L +AG D Sbjct: 179 AGSVRIPSALCGVVGLKPTTGVIPQTILPGRYNNWAYHGPITRTVADNALMLDVLAGPDH 238 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D + Y A I G+ + L Y+ P + + ++ ++ GAKIV Sbjct: 239 SDPLSIERVETSYVEAARGGIDGLRIAWSPNLGLGYVDPDVAAVCAEAVACFEEMGAKIV 298 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E +P + A + G+ D+L+ ++ + + Sbjct: 299 E---------------ATPDWGDPSQAMWHGIWVPGFAGEHDMLDW--DSLHGDVDENLI 341 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 I G R Y RA R + +TE F DV+++PT ++ FPL + Sbjct: 342 ELIHEG-----RRLTGVDYGRADTFRGRMWDTWTE-FMNDYDVLISPTLASATFPLTQFA 395 Query: 421 NN----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + + + T NM PAI+VPA P+GLQ+ + ++ + Sbjct: 396 PDWLQGKSLREQLLDWLLTYPYNMLNNPAITVPAGFTPDGRPVGLQIAARHRQDALVLRA 455 Query: 477 GQIIEK 482 +E+ Sbjct: 456 AANLEQ 461 >gi|294460121|gb|ADE75643.1| unknown [Picea sitchensis] Length = 529 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 129/492 (26%), Positives = 218/492 (44%), Gaps = 54/492 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + + + ++ +++ LV+ Y+ I+ N ++A IEV A +R+ G Sbjct: 50 IPQIQQAFKAGKLTSRGLVEFYLDRIKKLNPLLHAVIEVNPDALLLADIADTQRLKAGGT 109 Query: 69 RD--LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ IKD A+ ++T A S L G + ++ V KL +GA++LGK ++ Sbjct: 110 IESALHGIPVLIKDNIASNDKLNTTAGSFALLGSKVARDAGVVNKLRKSGAIILGKASLS 169 Query: 126 EFA-MGSSNETSYYGPVISPWRSMDSTDKFT----PGGSSGGSSAAVAGFLCAASIGTDT 180 E+A SSN S + R + D + P GSS GS+ VA + A ++GT+T Sbjct: 170 EWAHFRSSNAPSGWSA-----RGRQAKDPYVLTADPCGSSTGSAVGVAANMAAVTLGTET 224 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI P+ VGIKPT G SR G+I + D G I RTV D+ LL I GYD Sbjct: 225 DGSILCPSGANAVVGIKPTVGLTSRAGVIPISHHQDTVGPICRTVTDAVYLLDEIVGYDP 284 Query: 241 CDATCVN-----LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLK 293 D +P Y++ L + G +GI + +S + + ++++ ++ L+ Sbjct: 285 RDHRASKRAAPFIPKGGYKQFLKPDGLHGKRLGIVRGPDFSKMSGSSEAVSFEKHLATLR 344 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS- 352 GA +V S + A + + + YD ++ L + ++L+ T + Sbjct: 345 QKGATLVANS------GIDAILNANNGIEENTILLYD-FKHDLNIYLSELLQSPVRTLAD 397 Query: 353 -IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-------GVDVI 404 I F + I Y ++L A+ +D+ ++ ++ G+D + Sbjct: 398 IIAFNKRHPQEEKIFEY------GQDYFLEAQNTSNFNAKDYKKSLKRVQSITKNGIDKV 451 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L + G NN +N V +A+ AG P I VPA + +P G+ Sbjct: 452 LKDYKLDALVAPG---NN-------FNIVSLLAI--AGYPGIIVPAGYDKSGVPFGICFG 499 Query: 465 GQPFREETLFSV 476 G E TL + Sbjct: 500 GGRGSEPTLIKI 511 >gi|312138596|ref|YP_004005932.1| amidase [Rhodococcus equi 103S] gi|311887935|emb|CBH47247.1| amidase [Rhodococcus equi 103S] Length = 487 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 122/486 (25%), Positives = 209/486 (43%), Gaps = 33/486 (6%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +M+ +E ++ SK +S E+ + I+ ++ N +NA + A + R A E + Sbjct: 19 SDPGWMSATEMAAQVASKSLSPNEIAEEMIRRVDEINPAVNAIVHFDADQVRRDAAELTR 78 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +G+ L G+P IKD +G+ T + ++ + +L G + LG Sbjct: 79 AQASGEQLGPLHGVPFTIKDLTDVRGLPTTFGLKPMRDNIAERDAVIVTRLRQAGGLYLG 138 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N E + +GP +PW+ T GGSSGG++AAVA L + G+D Sbjct: 139 KTNTPESGYYGGTDNHLFGPTHNPWKP-----GHTAGGSSGGAAAAVAAGLGPLAEGSDG 193 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R P++ G VG+KPT G + + + G ITRTV D+A++L +AG D Sbjct: 194 AGSVRIPSALCGVVGLKPTTGVIPQTILPGRYNNWAYHGPITRTVADNALMLDVLAGPDH 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D + Y A I G+ + L Y+ P + + ++ ++ GAKIV Sbjct: 254 SDPLSIERVETSYVEAARGGIDGLRIAWSPNLGLGYVDPDVAAVCAEAVACFEEMGAKIV 313 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E +P + A + G+ D+L+ ++ + + Sbjct: 314 E---------------ATPDWGDPSQAMWHGIWVPGFAGEHDMLDW--DSLHGDVDENLI 356 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 I G R Y RA R + +TE F DV+++PT ++ FPL + Sbjct: 357 ELIHEG-----RRLTGVDYGRADTFRGRMWDTWTE-FMNDYDVLISPTLASATFPLTQFA 410 Query: 421 NN----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + + + T NM PAI+VPA P+GLQ+ + ++ + Sbjct: 411 PDWLQGKSLREQLLDWLLTYPYNMLNNPAITVPAGFTPDGRPVGLQIAARHRQDALVLRA 470 Query: 477 GQIIEK 482 +E+ Sbjct: 471 AANLEQ 476 >gi|319783271|ref|YP_004142747.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169159|gb|ADV12697.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 475 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 127/501 (25%), Positives = 207/501 (41%), Gaps = 56/501 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +M SE+ ++K +S VEL+ + I+ E + +N +A A +++ + Sbjct: 5 DLCYMPASEALRLFKAKKLSPVELMQATIRRAEATKPTINCLTFTHFDEAMDLARKAEAK 64 Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G AR LEG+PIGIKD K T S + + ST+ +++ G ++ Sbjct: 65 YARG-ARTGALEGLPIGIKDESYIKDKPTSHGSLLSRDAIGGHTSTMNERIIKAGGIVHA 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + EF+ + +G +PW FTPGGSSGG++A +A + + G+D Sbjct: 124 RTATPEFSCAGYTWSKRWGVTRNPWNP-----DFTPGGSSGGAAATLASGTSSIATGSDI 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD---QAGIITRTVRDSAILLKAIAG 237 GSIR PAS G VG KP YGR +LD G + R V D+ +L ++G Sbjct: 179 AGSIRIPASACGLVGFKPPYGRNPDEPPF----NLDFYCHTGPLARNVGDAILLQNVMSG 234 Query: 238 YDECDATCV--NLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D + L +P DY + I+G + + + P + K + Sbjct: 235 PSPLDIATLRPKLRLPSDY-----KPIKGCKIAFSMDLGSFEVDPDVRKNTLAACDVFRS 289 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA + E+ L L A ++L++ L+ GKD M R Sbjct: 290 LGATVEEVDLGWGDDVLKAGMAYLEHLFGASLSQL------LKEHGKD---MTSYARQFA 340 Query: 355 F-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GQ K +GT +++R Y + + L+ + DV++ PT A Sbjct: 341 EDGQRSKATDFVGTLEVAARMYQT-------LGPLL---------ETYDVLICPTNALPA 384 Query: 414 FP------LGKEENNSGSMGHIYNDVFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIGQ 466 P G E N + V T NM P +SVP+ +P G+Q++G+ Sbjct: 385 VPAEFDQTTGTVEINGKQVNPSLGWVMTTPFNMMSRCPVLSVPSGRAASGVPTGIQIVGR 444 Query: 467 PFREETLFSVGQIIEKEAGYF 487 + + +F E G + Sbjct: 445 TYCDADVFRAAMAYETAKGQW 465 >gi|114763549|ref|ZP_01442954.1| amidase [Pelagibaca bermudensis HTCC2601] gi|114543829|gb|EAU46841.1| amidase [Roseovarius sp. HTCC2601] Length = 475 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 131/475 (27%), Positives = 213/475 (44%), Gaps = 52/475 (10%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKRIINGDARDLEGIP 75 R+K ISA +L+ + + I+ +N +NA + + A+ A AE D G L G+P Sbjct: 22 RNKQISARDLMQAVLDRIDATNPAINAIVTLRARDTLIAEAEAMDAAPHPGP---LAGLP 78 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 I +KD ATKG+ T S + P + V +L GA+++GK N E+ GS + Sbjct: 79 IAVKDLVATKGMRTTYGSPVFSDHVPAADDLVAARLRAAGAILIGKTNTPEWGHGSHSFN 138 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +G +P+ D+T T GGSSGG++AA+A + + G+D GS+R PA+F G Sbjct: 139 PIFGATRNPY---DTTR--TAGGSSGGAAAALAARMLPLADGSDMMGSLRNPAAFCNVYG 193 Query: 196 IKPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP--- 251 +P++G G +F +L G + R+ RD A+LL A+AG N VP Sbjct: 194 FRPSWGLVPPDAGGDTFLSTLATEGPMARSPRDVALLLSALAG--------PNPEVPFGR 245 Query: 252 ---DYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHT 307 D+ ++G +G ++ Y + P I +T + + + GA + + P+ Sbjct: 246 ASEDFTARFGAGLKGKRIGWLADWGGAYATEPGILETVEASLKVFEALGAIVEPVQAPYP 305 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L + +I +R L K L R++ E I G Sbjct: 306 AEELWSSWIT--------------LRAALNAGAKRDLAADPAKRAL-TKPESLWEIEQGQ 350 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG---KEENNSG 424 + + Y+ A K R+L R FE D + P+ FP EE Sbjct: 351 GLSAEAVYE-----ASKTRSLWYRRAARLFET-YDALALPSAQVWPFPADWRWPEEIADR 404 Query: 425 SMG--HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 M H + ++ V V++AGLP + +PA + +P+G+QL G + L ++G Sbjct: 405 KMDTYHRWMEI-VVPVSLAGLPCLGMPAGFSQSGLPMGMQLFGPTGSDAALLAMG 458 >gi|257141179|ref|ZP_05589441.1| amidase [Burkholderia thailandensis E264] Length = 521 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 141/483 (29%), Positives = 224/483 (46%), Gaps = 46/483 (9%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I I+ ++NA IE+ A A+ D G AR L G+ + +KD AT + Sbjct: 53 IARIDRDGPRLNAIIEL-NPDAEVIAQALDAEQAAGAARGPLHGVTVALKDNIATGDRMS 111 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 112 TTAGSLALDGVRATRDAHLVAQLRRAGAVIVAKTNLSEWANFRSTRSTSGWSARGGLSRN 171 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T GSS GS+ AVA L A ++GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 172 PYALDRTT-SGSSSGSAVAVAAGLVAMAVGTETDGSIVSPAALNGCVGLKPTVGRVSRDG 230 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIA-GYDECDATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTV D+A LL A+A G A DY ALD +++G Sbjct: 231 IVPLSHTQDTAGPIARTVLDAARLLGALAGGDANDPAAASAPAPADYVAALDANALRGAR 290 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASS 324 +GI + Y + +D ++ I+ ++ GA +++ + LP Y E Sbjct: 291 IGIARAYFTGH--DEVDAQIERAIAQMQRLGAIVIDPVDLPKPDY-----------EGDE 337 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRS----IGF--GQEVKHRIMIGTYVLSSRCYDSH 378 ++GL + + R+ I F Q V+ G +L R ++ Sbjct: 338 KTVLLHEFKHGL-PQWLRAFAPHARVRTLADVIAFNDAQRVREMPYFGQELL-LRAQEAG 395 Query: 379 YLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L A R + R A ++G +D ++ PT T A+ + + G G Sbjct: 396 GLDAAAYREALARCGRRARDEGLAHVLREQRLDALVAPTEGT-AWLIDLINGDCGGEG-- 452 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G E+ + R Sbjct: 453 ----FSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAFEQATQWRRE 507 Query: 490 HKW 492 ++ Sbjct: 508 PRF 510 >gi|194017613|ref|ZP_03056224.1| amidase [Bacillus pumilus ATCC 7061] gi|194010885|gb|EDW20456.1| amidase [Bacillus pumilus ATCC 7061] Length = 495 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 131/499 (26%), Positives = 217/499 (43%), Gaps = 69/499 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+K ++ ELV + + N ++NA I+ R + + ++ ++ G+P Sbjct: 20 VRNKQVTPDELVQAAFARLNEVNPELNALIQT-----RQDQVLKEIKTLH-TSQPFAGVP 73 Query: 76 IGIKDCFATKGIHTQ---ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +K+ ++G+ + A + +L + +S Q+L G +M+G N EF + + Sbjct: 74 FVLKNI--SQGLENEPLTAGAALLKDVKAKTDSHFVQRLKQAGFLMMGHTNTPEFGLRNV 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E + +GP +PW ++PGGSSGG++AAVA + A +D GGSIR PASFTG Sbjct: 132 TEPALHGPTRNPWHP-----DYSPGGSSGGTAAAVASGIVPAGGASDGGGSIRIPASFTG 186 Query: 193 TVGIKPTYGRCSR---LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+KPT GR G S+D +T+TVRDSA LL + A L Sbjct: 187 LFGLKPTRGRTPVGPGAGRQWQGASID--FTLTKTVRDSAALLDLLQVIQPEAAFQTPLY 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y+ L + M + E + +S + QQ + WL D G ++ E P Sbjct: 245 DGSYQEDLVKRTSSMRIAYSVESPVGTKVSEEAKQAVQQTVKWLSDQGHQVEEAG-PAID 303 Query: 309 --YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG-QEVKHRIMI 365 + + YY+++ E S+ + R G+ + E T + + E + Sbjct: 304 GIHLMQQYYVMNSGEMSALFTSLN------RSLGRPVNP--EETDIVAWVLAEAGKNVTA 355 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG-----KEE 420 Y S +D + A ++ +F Q D+ +TP T SA +G KEE Sbjct: 356 AAYTESLDAWD---MAAAQM---------ASFHQTYDLFVTPATAYSAPKVGELMHSKEE 403 Query: 421 ----------NNSGSMGHIYN--------DVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 + IY+ FT N+ G P++SVP L + MPLG+Q Sbjct: 404 ITELLRVSSLSMQAQQDLIYDMFLKSLTYTPFTQLANLTGQPSMSVPVHLTKAGMPLGVQ 463 Query: 463 LIGQPFREETLFSVGQIIE 481 + +E+ L + +E Sbjct: 464 VTAPKGKEDWLLRLAAEME 482 >gi|312216316|emb|CBX96267.1| hypothetical protein [Leptosphaeria maculans] Length = 647 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 38/325 (11%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGI 78 + ++V+LV++Y+ I NS ++ E+ A A+E D+ NG R L G+PI I Sbjct: 145 NFTSVDLVNAYVARIIEVNSTLHMVTEI-NPDAWNIAKELDEERANGTLRGPLHGLPILI 203 Query: 79 KDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGSSN 133 K+ AT ++ A S L G + ++TV KL GA++LGK N+ ++A SSN Sbjct: 204 KNNIATADKMNNTAGSWALVGAKVPRDATVASKLRAAGAILLGKTNLSQWANYRSSNSSN 263 Query: 134 ETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S +G + + PG GSS GS A + L ++GT+T GSI P+ Sbjct: 264 GWSAHG--------GQTYGAYYPGQDPSGSSSGSGVAASLGLAFGTLGTETDGSILSPSQ 315 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV--- 246 VGIKPT G SR +I + D G + RTV+D+A +L+AIAG D D + Sbjct: 316 LNNIVGIKPTVGLTSRSLVIPISERQDTVGPMARTVKDAAYILQAIAGPDPADNYTLAIP 375 Query: 247 -----NLPVPDYERA--LDQSIQGMTVGIPKE---YRLDYLSPTIDKTWQQGISWLKDAG 296 ++P PDY A LD ++ G +G+P+ R +P +D ++ + L +AG Sbjct: 376 WSQNSSVPKPDYVAACTLD-ALHGARIGVPRNALGRRTASSAPILDA-FEAALDVLSNAG 433 Query: 297 AKIVEISLPHTQYALPAYYIISPAE 321 A IV+ +T Y A Y+ S AE Sbjct: 434 AIIVD----NTNYTAYASYLNSTAE 454 >gi|54298246|ref|YP_124615.1| hypothetical protein lpp2304 [Legionella pneumophila str. Paris] gi|53752031|emb|CAH13457.1| hypothetical protein lpp2304 [Legionella pneumophila str. Paris] Length = 469 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 133/531 (25%), Positives = 222/531 (41%), Gaps = 112/531 (21%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIE-VVAQKARAAAEES 59 M ++ ++ +E R++ K++SA E++ +++ I+ N +NA E + ++ A+E Sbjct: 1 MDAIHLLSATEIIRRIKMKELSAAEVMVAHLNHIDKINPVINALTERIPPEECLKQAKEI 60 Query: 60 DKRIING-DARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 DK I + + L G+P+ IKD KG I + ACS G + ++T+ +L GA+ Sbjct: 61 DKSIASKKNLNKLMGLPVAIKDALYVKGLICSSACSGFYKGEKAVRDATLVSRLKKEGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LG N+ E G ++ YG +P+ T GGSSGGS+A +A ++G Sbjct: 121 ILGLTNVPELCRGGDSDNLIYGRTNNPYDLAR-----TSGGSSGGSAALIAAGGVPFALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG------------IISFAPSLDQAGIITRTV 225 +D GGS+ QPA G V +KPT+G G +ISF P + R+V Sbjct: 176 SDGGGSLMQPAHCCGIVALKPTHGHLPHTGSVGGDSYGLIGNLISFGP-------MARSV 228 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERA-----------------LDQSIQGMT--- 265 D + L +AG D+ D PVP A +D IQ + Sbjct: 229 SDLRLGLSVLAGSDQYDP--YTNPVPVMPAAPLKKLRVAYFTENGFTPVDAEIQNVVKSA 286 Query: 266 -------VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 V + +E R D +S D W+ + + AG K + L Sbjct: 287 ALALQDDVAMVREVRPDCVSKAFDLHWELFLGGDRGAGFKTMLSEL-------------- 332 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 GV L E ++ L E T+ F H+ Sbjct: 333 ------------GVN-NLSWELQEFLRQAEQTQ---FSVTQLHQ---------------- 360 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 R R+I R F Q DV+++P PT+A P G + I + + + Sbjct: 361 --RMREIDLF--RLELALFMQDYDVLISPVFPTAAKPHGI------GIKEISDFSYAMTH 410 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 N++G P IS+ K +P+ + + +++ T +V + +E+ G ++P Sbjct: 411 NLSGFPTISLRCGTSAKGLPINILIAANRWKDTTSLAVAERLEQLMGGYKP 461 >gi|169631717|ref|YP_001705366.1| amidase family protein [Mycobacterium abscessus ATCC 19977] gi|169243684|emb|CAM64712.1| Amidase family protein [Mycobacterium abscessus] Length = 455 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 122/453 (26%), Positives = 198/453 (43%), Gaps = 43/453 (9%) Query: 24 VELVDSYIQAIENSNSQMNAYI----EVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 +E+ D+ ++ IE N +NA++ E V + AR E+ KR L GIP +K Sbjct: 1 MEVADAVLRRIEKVNPLLNAFVFHNPEQVLRDARRLTEDLTKRTT---LPPLYGIPYSVK 57 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 + A + + V+ +L +G + LGK N+ E +S++ YG Sbjct: 58 EVCAVAATPVTSGVVAFKDMVADRDEPVSARLRASGGLFLGKTNIAEGGYKASSDNHLYG 117 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW T GGSS G+ AAVA + + GTD GGSIR PA+ G VG KP+ Sbjct: 118 STRNPWHP-----GMTAGGSSSGAGAAVAAGMGQLAQGTDGGGSIRIPAALNGVVGFKPS 172 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 GR + + + G ITRTV D+A++L +AG+D+ D + DY ALDQ Sbjct: 173 LGRIPQTRLAGRFHTFAFHGPITRTVADAALMLTTMAGFDDEDPLSLPSDGVDYLAALDQ 232 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 I+ + + + I ++ + + G + E + PA + Sbjct: 233 PIESGRMAWSPDLGISKCDSEIQGICEEALIAFVEMGWTVEE---DRPDWTDPAKTM--- 286 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 ++GV +G GK +++ ++ QE+ I G + + + + Sbjct: 287 ---------WEGV-WGPVYAGKLDAANWDD-QAGHVDQELVQVIRDGARLTTVQVQRADA 335 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG------HIYNDV 433 R + + TL R+F F D ++TP T AF G +E + + V Sbjct: 336 ARGKMVDTL--REFLRRF----DFLVTPVTTAQAF--GHDEFCPAVLAGAPLLERLMGWV 387 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 T NM PAIS+P +P+GLQ++G+ Sbjct: 388 LTYPFNMTTNPAISIPVGFTRNGVPVGLQIVGR 420 >gi|70997715|ref|XP_753594.1| amidase [Aspergillus fumigatus Af293] gi|66851230|gb|EAL91556.1| amidase, putative [Aspergillus fumigatus Af293] gi|159126673|gb|EDP51789.1| amidase, putative [Aspergillus fumigatus A1163] Length = 611 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 156/306 (50%), Gaps = 20/306 (6%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E ++ L S+V+LV++Y+ I NS ++ +EV A A + D G R Sbjct: 107 AELQEGLTKGCFSSVDLVNAYVTRINEVNSTLHMVLEV-NPDAWDIARQLDLERKYGRVR 165 Query: 70 -DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+PI +K T+ T A S+ L G + +STV +KL G ++LGK ++ E+ Sbjct: 166 GPLHGLPILVKGNIGTEDKTETAAGSYALVGAKVAADSTVAKKLRQAGVIILGKTSLSEW 225 Query: 128 AM-----GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 A GSS + G + + K P GSS GS A L A++GT+T G Sbjct: 226 ANFRSLNGSSGWNAQGGQTYAAYYP-----KQDPSGSSSGSGVAADLGLAFAALGTETNG 280 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI P+ + VGIKPT G SR +I + D G + RTV+D+AI+L+AIAG D+ D Sbjct: 281 SILSPSENSNIVGIKPTVGLTSRYMVIPISERQDTIGPMARTVKDAAIILQAIAGPDKND 340 Query: 243 ATCVNLP----VPDYERALDQS-IQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDA 295 + P +P+Y A S ++G +GIP+ LD S I ++ +S + A Sbjct: 341 NYTLASPFGSHLPNYVAACTLSGLKGKRIGIPRNVINTLDASSEPIVSAFEAAVSVISKA 400 Query: 296 GAKIVE 301 GA IVE Sbjct: 401 GATIVE 406 >gi|310790287|gb|EFQ25820.1| amidase [Glomerella graminicola M1.001] Length = 546 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 99/295 (33%), Positives = 146/295 (49%), Gaps = 19/295 (6%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 ++V+LV++Y+ I N +N EV AA+ R L GIPI IK+ Sbjct: 49 FTSVDLVNTYLGRINQVNGTLNVVTEVNPDALSIAADLDASRAKGSIKGPLHGIPILIKN 108 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS--- 136 AT ++ A S L G + +S + +KL + GA++LGK N+ ++A SN TS Sbjct: 109 NIATADRMNNTAGSWALVGAKVSQDSFMAKKLREAGAIILGKTNLSQWANYRSNNTSNGW 168 Query: 137 --YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 Y G V + + P GSS GS A L A++GT+T GSI PA V Sbjct: 169 SAYGGQVYAAYYPQQD-----PSGSSSGSGVASDLGLALATLGTETDGSIVSPAQRNNLV 223 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP----V 250 GIKPT G SR +I + D G + RTV+D+A +L AIAG D D +P + Sbjct: 224 GIKPTVGLTSRHLVIPISEHQDTIGPMARTVKDAAYILHAIAGADSKDNYTSAIPNNGEI 283 Query: 251 PDYERALDQ-SIQGMTVGIPK---EYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P+Y A D ++ G +GIP+ E D + + +++ + + AGA IV+ Sbjct: 284 PNYPAACDTYALCGARIGIPRNAIELFSDNTTGIETRAFEEALDVFRSAGAIIVD 338 >gi|108763797|ref|YP_631063.1| amidase family protein [Myxococcus xanthus DK 1622] gi|108467677|gb|ABF92862.1| amidase family protein [Myxococcus xanthus DK 1622] Length = 484 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 132/482 (27%), Positives = 214/482 (44%), Gaps = 50/482 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R K+++ EL+ ++AI N +NA I+ + A+E + I G R G+P Sbjct: 18 VRRKEVTPEELLRVAVEAIHAVNPALNAVIDT---REGDASEALKQGIPEGPFR---GVP 71 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD G+ T S + G ++S + + G V+LG+ N EF ++ E Sbjct: 72 FLIKDIGLHAAGVPTDMGSRMAQGTVFPHDSALMARYRRAGLVLLGRTNAPEFGNNATTE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +GP +PW K +PGGSSGGS+AAVA + + G D GGS+R PA+ G Sbjct: 132 PVLHGPTRNPWDV-----KRSPGGSSGGSAAAVAAGIVPVAHGNDGGGSLRIPAALCGVF 186 Query: 195 GIKPTYGRCS---RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KPT GR S G F ++ +++R+VRDSA +L A G + D P Sbjct: 187 GLKPTRGRNSLGPDAGDFIFGMGIEH--VLSRSVRDSAAMLDATQGPEVGDPYFAPPPQR 244 Query: 252 DYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPH---- 306 Y + ++ + + + E + S + + + G +VE + H Sbjct: 245 PYLEEVGRAPGRLRIALMTEAPMGSPASAECVEAARAAARLCTELGHDVVEAAPEHDGQL 304 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 A+ + + A L ++ G R G ++LE ++ G+E+K Sbjct: 305 LHEAVCTVWSATMASLVGMLGQFSG-----RDPGPELLEA-TTWAAVRHGRELK------ 352 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + RA + L+ R F+Q DV+L+PT FPLG + N+ Sbjct: 353 ---------ATDLQRALGVFNLVSRQVGAFFQQ-YDVLLSPTVAAPPFPLGLLDANAPRT 402 Query: 427 GHIYND------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + D FT N+ G PA+SVP + +P+G+Q G+ E TLF + + Sbjct: 403 AREWYDHAFGHCPFTALFNVTGQPAMSVPLHWSAEGLPIGVQFAGRYAAEATLFQLAGQL 462 Query: 481 EK 482 E+ Sbjct: 463 EQ 464 >gi|186475480|ref|YP_001856950.1| amidase [Burkholderia phymatum STM815] gi|184191939|gb|ACC69904.1| Amidase [Burkholderia phymatum STM815] Length = 462 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 17/311 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNA-YIEVVAQKARAAAEESDKRIINGDA-RDLEG 73 L S ++ LV++ + I + Q A +++V A ARA A+ D+ G L G Sbjct: 22 LASGRTTSRALVEAALARIADPAGQGAAVFMQVDADNARATADAHDRLRAAGTVLSPLAG 81 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAMGSS 132 IP+ +KD F +G T+A S +L P +L GAV++G+ NM EFA Sbjct: 82 IPVSVKDLFDVEGQVTRAGSTVLANAAPATADAPAVARLKRAGAVIVGRTNMSEFAFSGL 141 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +SP+R D+ GGSS G++A+VA + A ++G+DTGGS+R PA+ G Sbjct: 142 GLNPHYGNPLSPYRRGVKGDERVSGGSSSGAAASVADGMAAVALGSDTGGSLRIPAALCG 201 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 G KPT R + G + +P+LD G I TV A++ + +AG + PV Sbjct: 202 LTGFKPTADRVPKQGGVPLSPTLDAFGAIGATVACCALVDRILAGLE---------PVIP 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQYAL 311 R L +G +G+ Y D + P + + + + L+ AGA + ++ P + A Sbjct: 253 AARPL----EGARLGVLNHYVTDGIEPEVAEAYDAALKHLEAAGAIVSDVRFAPLDRLAE 308 Query: 312 PAYYIISPAEA 322 + SP EA Sbjct: 309 INRFGFSPIEA 319 >gi|317130523|ref|YP_004096805.1| amidase [Bacillus cellulosilyticus DSM 2522] gi|315475471|gb|ADU32074.1| Amidase [Bacillus cellulosilyticus DSM 2522] Length = 501 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 137/513 (26%), Positives = 238/513 (46%), Gaps = 82/513 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-E 72 + ++ K+++ +E++++ I+ IE N ++NA I + +A+ A+ +N A + Sbjct: 17 ELIKRKEVTKLEVLEAAIEKIEQLNPKLNAVIHKMYDQAKNEAQ------VNTSAEGIFA 70 Query: 73 GIPIGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ +KD G + S ++ ++T T+ L GA+ +G+ N+ EFA+ Sbjct: 71 GVPMLLKDITQEIAGEPITSGSKAFQNYKAKQDATYTKLLRQTGAIFIGQTNVPEFALMG 130 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 E YGP +PW +TD TPGGSSGGS++AVA + + D GGSIR P ++ Sbjct: 131 ITEPLQYGPTRNPW----NTDH-TPGGSSGGSASAVASGMVPIAGANDGGGSIRIPGAYC 185 Query: 192 GTVGIKPTYGRC---SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G+KPT GR G S D ++TRTVRDSA +L ++ Y E A + Sbjct: 186 NLFGLKPTRGRTPTGPTFGRHWQGASADH--VLTRTVRDSAAMLDVLS-YHEKGAAFLAP 242 Query: 249 PVP-DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQ----QGISWLKDAGAKIVEI 302 P Y +A+ + I+ +T+ + L T+D + + + L+D G + EI Sbjct: 243 PFTGSYLQAMYEPIKRPLTIAFSTQ---SPLGTTVDDECKTAVIKAMQLLEDMGHHVEEI 299 Query: 303 SLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P + + +Y + E ++ +A + G +V+ D+ T +G + Sbjct: 300 TAPVNGETIAKSYLTMYFGEVAATIASLENT-LGRKVKMSDV---EPTTWLLGL---IGK 352 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT-EAFEQGVDVILTPTTPTSAFP----- 415 I +VL R +D K F+ E F + D+ +TPTT AFP Sbjct: 353 SISAQEFVLHLREWD-------------KAAFSMEKFHEKYDLYVTPTT---AFPPARIG 396 Query: 416 ---LGKEEN---------NSGSM----GHIYN--------DVFTVAVNMAGLPAISVPAA 451 L + E+ N+G + G + N FT N+ G PA++VP Sbjct: 397 EMKLSRTEDFLVKLVGRLNAGKLLKQTGVVQNIAEKNLERTPFTQLANLTGQPAMTVPMH 456 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ++ +P G+Q + +E+ LF + +E+ + Sbjct: 457 FTKEGLPCGVQFMAAKGQEKLLFQLASTMEEHS 489 >gi|229160934|ref|ZP_04288923.1| Amidase [Bacillus cereus R309803] gi|228622502|gb|EEK79339.1| Amidase [Bacillus cereus R309803] Length = 536 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 128/475 (26%), Positives = 215/475 (45%), Gaps = 65/475 (13%) Query: 31 IQAIENSNSQMNAYIEV---VAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT-KG 86 IQ + + +N+ E+ ++AR EE +K +L G+P+ +KD T K Sbjct: 98 IQEHDQNGISLNSITEINPDAIEEARKLDEEREK----NKKSNLYGMPVIVKDNVQTAKV 153 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPV 141 + T A +++L + ++T+ +KL GA +LGK NM E+A S + G Sbjct: 154 MPTSAGTYVLKNWIADEDATIVKKLKVEGAFILGKANMSEWANYLSFTMPSGYSGKKGQN 213 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 ++P+ + F GSS GS+ VA +IGT+T GSI PA+ VG++P+ G Sbjct: 214 LNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTETTGSIVAPATQQSVVGLRPSLG 269 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP---DYERALD 258 SR GII A SLD AG + RTV+++A+L ++ GYDE DA + DY + L Sbjct: 270 MVSRTGIIPLAESLDTAGPMARTVKEAAMLFNSMVGYDERDAMTEKMKDKEGIDYIKDLS 329 Query: 259 -QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV-EISLPHTQYALPAYYI 316 ++G +GI + +D ++ L+DAGA + +I L Sbjct: 330 IDGLKGKKIGIL--FSVDQQDENRKAVAEKIRKDLQDAGAILTDDIQL------------ 375 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENT------RSIGFG-QEVKHRIMIGTYV 369 AE NL + Y + D L +N I F ++ K RI G + Sbjct: 376 --NAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSLEEIIAFNSKDSKRRIKYGQTL 430 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + + +I +++ A ++ +D+ L E ++ I Sbjct: 431 IEGS--EKSNITKEEIEKVVQTSQENARKE-LDMYLV-------------EKGLDALVMI 474 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ND ++ +AG P ++VPA P+G+ +G+ F E LF++G E+++ Sbjct: 475 NNDEVLLSA-VAGYPELAVPAGYDTNGEPVGVVFVGKQFGERELFNIGYAYEQQS 528 >gi|126133777|ref|XP_001383413.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (amidase) [Scheffersomyces stipitis CBS 6054] gi|126095562|gb|ABN65384.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (amidase) [Scheffersomyces stipitis CBS 6054] Length = 521 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 35/436 (8%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 +R L G I KDC + + + P ++TV + + GA ++G + Sbjct: 93 SRPLAGRTITFKDCVEVGKVPQIGGTDSWKPWTPEADATVVTRALEAGAKLVGLATCENQ 152 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +S+ TS G V +P+ S SS G V ++G D GGSIR P Sbjct: 153 CSSTSSSTSSTGDVPNPYGKSHSAGG-----SSSGCGYLVGTGEVDLAVGADQGGSIRVP 207 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 + G VG+KPT+G GI S + D AG +T+ V D+A+LL +AG D D + Sbjct: 208 SCQCGIVGLKPTFGLIPYSGIGSNEFNNDHAGPMTKDVLDNALLLGVLAGVDGFDDRQMG 267 Query: 248 LP----VPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P VPDY + + + S++GM +GI KE + ++ + + + + GA++VE Sbjct: 268 APLYKDVPDYTKLVKESSVKGMKIGILKESLEVPAMTEAMKEKFLHQAKLWEALGAEVVE 327 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV--EGKDILEMYENTRSIGFGQ-- 357 +S+P+ A P ++ A + R G++ G RV K I Y T+ F + Sbjct: 328 VSIPYHHIA-PEIWMTGQRVAGA--VRKLGMQCGRRVVQSSKAIDHCYPWTQE-SFEKAP 383 Query: 358 -EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 VK+ ++ G Y++ + Y++ + + ++ +A E VDV++TPT P +A Sbjct: 384 VNVKNGLINGLYLMEK--HPGIYVKTINLSFKARAEYDKALET-VDVLITPTVPFAAPRH 440 Query: 417 GKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALC------EKKMPLGLQLIGQ 466 G + + + I N + T N+ G PA++ P + K P+G+Q+IG+ Sbjct: 441 G--DRKASPIKRIKNTIGLNANTGIFNITGHPALTFPMGFLASQEDPDMKFPVGIQIIGK 498 Query: 467 PFREETLFSVGQIIEK 482 F E+++++ E+ Sbjct: 499 HFDEQSVYAAAYAWEQ 514 >gi|302665999|ref|XP_003024603.1| amidase family protein [Trichophyton verrucosum HKI 0517] gi|291188667|gb|EFE43992.1| amidase family protein [Trichophyton verrucosum HKI 0517] Length = 592 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 14/288 (4%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD-CF 82 + +V +Y+ I NS + A E+ A + ++R + L G+PI IK+ F Sbjct: 106 IVVVQTYVARIAEVNSTVRAVTEINPDALTIAKQMDNERKMGKLRGPLHGLPIVIKNNIF 165 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGSSNETSYY 138 + + A S+ + G R ++TV KL + G V++GK ++A + S+N S Y Sbjct: 166 TDDKMSSTAGSYAIFGARTSADATVATKLREAGLVIMGKSGASQWANFRSLNSTNGWSAY 225 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G ++ + P GSS GS A L A++GT+T GSI PA + VG+KP Sbjct: 226 GGQVTAAYIKNQD----PSGSSSGSGVASDLGLAFATLGTETSGSIVSPADKSNIVGLKP 281 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---VPDYER 255 T G SR ++ + D G + R+V+D+A LL+ IAG D D +P +PDY + Sbjct: 282 TVGLTSRRFVVPISERQDTVGPMARSVKDAAYLLQVIAGKDSNDNYTSAIPFDTIPDYVK 341 Query: 256 ALD-QSIQGMTVGIPKEYRLDYLSP-TIDKTWQQGISWLKDAGAKIVE 301 A D +++G +G+P+ + SP T+ + Q ++ +K AGA IVE Sbjct: 342 ACDINALKGKRIGVPRNVIKIFGSPQTVVDQFNQALAVMKKAGAIIVE 389 >gi|239931082|ref|ZP_04688035.1| putative amidase [Streptomyces ghanaensis ATCC 14672] gi|291439453|ref|ZP_06578843.1| amidase [Streptomyces ghanaensis ATCC 14672] gi|291342348|gb|EFE69304.1| amidase [Streptomyces ghanaensis ATCC 14672] Length = 467 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 139/500 (27%), Positives = 214/500 (42%), Gaps = 53/500 (10%) Query: 1 MSEL--NFMAVSESR--DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA 56 M+EL + A+S R D R S V++ + ++ E ++NA++ + A+ A A Sbjct: 1 MTELADDLTALSAVRLLDGYRGGGFSPVDVTRAALRRAEEIQPELNAFVRLFAEDALERA 60 Query: 57 EESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILD--GFRPHYESTVTQKLWD 113 S++R G+ L +G+P+ +KD +G T S +D G R ++ +L + Sbjct: 61 RASERRWRRGEPCGLLDGVPVTVKDLLLLRGAPTLRGSRAIDPAGGRWDEDAPAVARLRE 120 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 +GAV LGK EF ++ G +P T GGSSGG++AAVA Sbjct: 121 HGAVFLGKTTTPEFGWKGVTDSPLSGVTRNP-----HDPARTAGGSSGGAAAAVARGAGP 175 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GTD GGS+R PA+F G +KPTYGR F +L G +TR D+A+L+ Sbjct: 176 LALGTDGGGSVRIPAAFCGIFALKPTYGRVPLHPASPFG-TLAHVGPMTRDAADAALLMD 234 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 IA D D + + P P+ A G+T G+ + R+ Y SP++ + Sbjct: 235 VIAAPDSRDWSALG-PAPESFAA------GLTGGV-RGLRVAY-SPSLGGQVAVRPAVAA 285 Query: 294 DAGAKIVEISLPHTQYALPAYY------IISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + ++ L AY + P +A L R R+ K + Sbjct: 286 AVRRAVERLA------GLGAYVEETDPDLTEPVDAFHTLWFTGAARAVQRLSRKQREVLD 339 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 R I +RC YL A +RT + F D+++TP Sbjct: 340 PGLREI--------------CAAGARCSALDYLAAVDVRTDLGHRMGR-FHDRYDLLVTP 384 Query: 408 TTPTSAFPLGKEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 T P +AF G E GS H + FT NM PA +VP +P+GLQL+ Sbjct: 385 TLPITAFEAGAEVPK-GSGHHRWTGWTPFTYPFNMTQQPAATVPVGTDADGLPIGLQLVA 443 Query: 466 QPFREETLFSVGQIIEKEAG 485 R+ + + EAG Sbjct: 444 ARHRDALVLRAAHAL-YEAG 462 >gi|118470455|ref|YP_887305.1| amidohydrolase, AtzE family protein [Mycobacterium smegmatis str. MC2 155] gi|118171742|gb|ABK72638.1| amidohydrolase, AtzE family protein [Mycobacterium smegmatis str. MC2 155] Length = 447 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 124/482 (25%), Positives = 202/482 (41%), Gaps = 74/482 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 LR+ ++VELV+ + AI + +NA+ V A+ A AA +D + G R L GI Sbjct: 26 LRNGHTTSVELVEHSLAAITRLDPTLNAFTAVDAEGALDAARHADAELARGHDRGVLHGI 85 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD G H ++ ++ ++L GAV++G+ + EFA G++ + Sbjct: 86 PVAVKDLVDVAG-HVTTRGSVVHPGPATADAECVRRLRTAGAVIVGRNVLHEFAFGATGD 144 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G +PW + + G S G + A AG + A +GTDT GS+R PA+ G V Sbjct: 145 RSAHGASRNPW----DPSRISGGSSGGSAVATAAGMVPLA-VGTDTAGSVRVPAALCGVV 199 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE----------CDAT 244 G KP YG G+ A SLD G+ RT +A A+AG D Sbjct: 200 GFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDPVRAQRVAWLDPA 259 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 C+ P AL ++++ + + L + + + + +++ S Sbjct: 260 CLGPCDPAIIAALSETLRAAQITVDGTVGLPFAAGEVFEAL------------SVLQSSE 307 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 +T+Y+ AE + D G + G+D ++ R+ Sbjct: 308 AYTEYS---------AETEQRASDIDPEVLGRLLRGRDT-PAWQYVRA------------ 345 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-S 423 C LRA TL+ R DV+ P PT A + + + Sbjct: 346 ---------CRQRDRLRA-AADTLLTR---------FDVLAMPAAPTVATEIDQRAHQID 386 Query: 424 GSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 G + + + ++ N+ G PA+SVPA + +P+GLQLI P E LF + IE Sbjct: 387 GHAVEVRSALLSLTCPWNLTGHPALSVPAGVV-SGLPVGLQLISAPGNEGMLFDLAARIE 445 Query: 482 KE 483 Sbjct: 446 HR 447 >gi|187478317|ref|YP_786341.1| amidase [Bordetella avium 197N] gi|115422903|emb|CAJ49431.1| putative amidase [Bordetella avium 197N] Length = 475 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 130/467 (27%), Positives = 205/467 (43%), Gaps = 35/467 (7%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+F E ++R +SA + ++ IE S + A+ V A++A A A+ +D+ Sbjct: 6 TALHFQDALEIGRQIRQGRLSARQAATYFLDRIER-GSALKAFTVVTAERALAQADAADR 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G A L G+P+ +KD +G S G + + L G V+LG Sbjct: 65 LLAAGLALGPLHGVPVAVKDSVQWEGTEATLGSQARAGQISTQTAAALRLLAAQGMVVLG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K M EFA G S + G +PW D+ PGGSS GS AVA L ++G DT Sbjct: 125 KTRMTEFAFGLSGQNVTQGTARNPW---DAALARAPGGSSSGSGVAVAAGLAPIALGGDT 181 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PA+ G VG KP+ G SR G++ + +LD G I R+V D+ L A+AG D Sbjct: 182 GGSVRAPATLNGLVGYKPSSGLISRAGVLPLSDTLDVLGPIARSVSDARALATALAGPDI 241 Query: 241 CDATCVNLP---VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + LP V R + V P+ + + TI W++ ++ L +G Sbjct: 242 DDKATLALPPSCVAGLRRPALPVAGPLAVLAPEAWPALLDADTI-ALWERTLTRLAQSGI 300 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + + P + A+ +S + Y+ RY G+ + + S+ Sbjct: 301 ALETWTPPQS------LSFARMAQDNSVVLGYEAYRY----YGELARDAAQPLWSV---- 346 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 V+ RI G R + Y + R F++A G +L P + +A L Sbjct: 347 -VRDRIAAG-----GRISPAEYEAVLRRRQADMMAFSQAI-HGFGALLMPASDQAAQALD 399 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 ++ +G + N G AIS+P E+ MP G+QL+ Sbjct: 400 PQDLRHAGLGQLLRP-----ANFLGAAAISLPGGFDEQGMPGGVQLM 441 >gi|293605907|ref|ZP_06688277.1| amidase [Achromobacter piechaudii ATCC 43553] gi|292815694|gb|EFF74805.1| amidase [Achromobacter piechaudii ATCC 43553] Length = 512 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 130/497 (26%), Positives = 221/497 (44%), Gaps = 56/497 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD--- 70 D +R +++S VE++ +Y+ I++ N ++NA V + A A E+ +R +A Sbjct: 44 DAIRRRELSCVEVMRAYLAHIDHVNPKINAI--VARRDADALLREAAERDAQLEAGQWLG 101 Query: 71 -LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + G+P KD A +G+ T S + D PH +S + +++ GA+ +G+ N+ EF Sbjct: 102 WMHGMPQAPKDLTAVRGMVTSMGSLVYKDQVTPH-DSIIVERMRAAGAIFIGRTNVPEFG 160 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +GS YG +P+ + T GGSSGG++AA+A + + G+D GGS+R PA Sbjct: 161 LGSHTYNPVYGTTGNPYNP-----QRTAGGSSGGAAAALAARMLPVADGSDFGGSLRNPA 215 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPS-------LDQAGIITRTVRDSAILLKAIAGYDEC 241 +F G++P+ GR + F PS L G + RT RD A+L+ +AG+D+ Sbjct: 216 AFCNVYGMRPSAGR------VPFGPSPEVFLKQLSYEGPMGRTPRDVALLMSVMAGHDKR 269 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPTIDKTWQQGISWLKDAGAKI 299 + + +ALD ++G VG +++ YL P I QG++ L G + Sbjct: 270 SPLSLRDDPAQFSQALDADMRGKRVGWLSDWK-GYLPMEPGILDVCAQGLATLDTVGCDV 328 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQE 358 ++ +P A L R L V G+ L TR + Sbjct: 329 IDYDVPF---------------AGDRLWRMWLTHRHLMVGGQFRALVQDPATRKL----- 368 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PL 416 VK ++ L Y +A + R+ + FE VD + P+ F L Sbjct: 369 VKPALIWEVEGLDGMTGLDVY-QATQERSAWYQTVLRMFED-VDFLAVPSAQVFPFDAAL 426 Query: 417 GKEENNSGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + +G Y+ +AG P ISVP + +P+G+QLIG P + + Sbjct: 427 DWPKEIAGRPMDTYHRWMETVTPWTLAGCPVISVPVGFNPEGLPMGMQLIGPPQADLDVL 486 Query: 475 SVGQIIEKEAGYFRPHK 491 + + + + H+ Sbjct: 487 RLAHAYDAASDWVSAHQ 503 >gi|302885483|ref|XP_003041633.1| hypothetical protein NECHADRAFT_85292 [Nectria haematococca mpVI 77-13-4] gi|256722538|gb|EEU35920.1| hypothetical protein NECHADRAFT_85292 [Nectria haematococca mpVI 77-13-4] Length = 538 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 141/521 (27%), Positives = 235/521 (45%), Gaps = 67/521 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIE-------NSNSQMNAYIEVVAQKAR 53 M ++ + + ++R +++ +A EL ++++ I+ N NS + V+A+ Sbjct: 30 MVDVRELTIPQARAGIKAGRFTAKELTAAFLERIDKLDKGGPNINSTLAISTTVLAE--- 86 Query: 54 AAAEESDKRI-INGDARD-LEGIPIGIKDCFA-----TKGIHTQACSHILDGFRPHYEST 106 AEE D+ NG + L GIPI +KD F KG+ + S + ++T Sbjct: 87 --AEELDRYFEQNGKLKGRLHGIPILVKDQFTISQADVKGLVSTYGSAVAKHNVADQDAT 144 Query: 107 VTQKLWDNGAVMLGKLNMDEFAMG--SSNETSYYGPVISPWR-SMDSTDKFTPGGSSGGS 163 + KL + GA++LGK M E+A S+N + Y +P+ S D G++ + Sbjct: 145 IITKLKEAGALILGKTTMAEWATAWFSANGATNYTFTKNPYNLSHDVGASSGGSGAAVAA 204 Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 S A+ CA +G DTGGSIR P+SF VGI+ T G SR G S D G + + Sbjct: 205 SLAI----CA--VGEDTGGSIRVPSSFCNLVGIRTTPGLVSRHGFCPLIKSQDAPGPMAK 258 Query: 224 TVRDSAILLKAIAGYDECD------ATCVNLPVP---DYERALD-QSIQGMTVGIPKEYR 273 TV D A+LL +AG+D D A +L +P Y LD + I+ +G+ ++ Sbjct: 259 TVTDCALLLDCMAGFDPNDEYTAYAARSASLGLPKGGSYAANLDAKIIKSARIGVVRQLF 318 Query: 274 LDYLSP---TIDKTWQQGISWLKDAGAKIVEISLPHTQYAL---PAYYIISPAEASSNLA 327 P T++ + + L++AG ++I + + +Y L Y+ S + ++ LA Sbjct: 319 GKDTDPHCRTVNAVIKSSVGKLEEAGTTFIDIHIDNLEYYLDFGQIYFQTSRHDINTFLA 378 Query: 328 RYDGVRYGLRVEGKDILEMYENTRSIGFGQEV-------KHRIMIGTYVLSSRCYDSHYL 380 + +DI + F Q + K+ TY + R Sbjct: 379 TKPHLP-------QDIASILPEKAEKSFLQMICSVAHGPKNPSKDPTY--ADRLLLRDEF 429 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNM 440 R RKI LI + A DV + P + A +E + + F ++ Sbjct: 430 R-RKINVLITTNNLNAL-VFPDVQVPPPRISDA---AEERFIINGVEDFPTNTFLASI-- 482 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 A LPAISVPA L E +P+G++L+G ++E+ L + +E Sbjct: 483 ARLPAISVPAGLTEDGLPVGMELVGLEYQEQHLLELAYGVE 523 >gi|227514869|ref|ZP_03944918.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus fermentum ATCC 14931] gi|227086778|gb|EEI22090.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus fermentum ATCC 14931] Length = 492 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 225/516 (43%), Gaps = 70/516 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L ++ +E +R +SA ELV + + I+ N +NA V++ + +AA E+D+ Sbjct: 6 TDLLSLSGTEMAQAVREGKVSATELVSASLAKIKEENPALNA---VISLREKAALNEADQ 62 Query: 62 RIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G + G+P +K T +G+ + + G S + L + G ++LG Sbjct: 63 LIDRG--QPFLGVPFLLKGLGQTFRGLPATNGNRLFQGQVAQSSSNFARALTNAGFIVLG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N EF + ++ YG +PW + PGGSSGG+ AAVA + + +D Sbjct: 121 QTNYPEFGFKNITDSKMYGDAHNPWNL-----AYYPGGSSGGAGAAVASKMVPIAGASDG 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG--IITRTVRDSAILLKAIAGY 238 GGSIR PAS+T T+G+KPT GR G + AG IT+ V D+A LL + Sbjct: 176 GGSIRIPASWTSTIGLKPTRGRVIT-GPSDWRSWQGAAGSFAITKDVEDTARLLDVLQAL 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGA 297 V L P + L Q+++ + VG E + + P Q ++L+ G Sbjct: 235 QPAAVFQVPLQKPSFADLLKQTVKPVRVGFTTESPVGTPVDPEAVAAVHQAATFLEQNGF 294 Query: 298 KIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILE-----MYENT 350 ++ EI +P AL +YY+++ E + A +D V L R D +E +Y Sbjct: 295 EVEEIEVPTDGRALIDSYYLMNEGETA---AMFDQVEASLGRAVTVDDMEPLTWALYRTG 351 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R I TY + +D ++ TL + ++LTPTT Sbjct: 352 RHIS----------AATYSNALAAWDQA---GYQMATL---------HEAYPLVLTPTTA 389 Query: 411 TSAFPLGKEENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAIS 447 +A + + + + + + FT N+ G PAIS Sbjct: 390 MTAPRIDQTMVSEAQLDQMRDIDALTPAAQQRFIFDQWLPSLTRSPFTQQANLTGEPAIS 449 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +P L + +PLG+QL+ +E L V ++ E + Sbjct: 450 LPTHLTKAGLPLGIQLVAGKGQEGLLLQVTKLFETQ 485 >gi|167045526|gb|ABZ10178.1| putative amidase [uncultured marine microorganism HF4000_APKG10H12] Length = 559 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 14/303 (4%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEESDK-RII 64 ++ +D + + + +A + ++Y+ IE N + + A +E A A A+E D+ R Sbjct: 60 IAALQDGMTTGEWTARSVTEAYLARIEQLNLRGPALRALLET-NPDALAIADELDRERRA 118 Query: 65 NGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G + G+PI +KD T + T A S L G+ P +S+V +L GAV+LGK N Sbjct: 119 QGPRGPMHGVPILLKDNIDTADRMTTTAGSLALSGWVPSEDSSVAARLRAAGAVLLGKAN 178 Query: 124 MDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + E+A S+ +S + R+ D+ P GSS GS V+ L A +IGT+T G Sbjct: 179 LSEWANFRSTRSSSGWSGRGGQCRNPYVLDR-NPCGSSSGSGVGVSANLVAVAIGTETDG 237 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+ PAS G VGIKPT G SR G+I + + D AG + RTVRD+AI+L AIAG D D Sbjct: 238 SVVCPASANGIVGIKPTVGLVSRAGVIPISHTQDTAGPMARTVRDAAIVLGAIAGVDPRD 297 Query: 243 ---ATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 A + DY LD I+GM +G+ + + L + + +D+ + I + AGA Sbjct: 298 PATAESETRGLVDYTPFLDAGGIRGMRIGVARRF-LGFHA-AVDQVVETAIEAMGAAGAV 355 Query: 299 IVE 301 +V+ Sbjct: 356 VVD 358 >gi|163791472|ref|ZP_02185879.1| hypothetical protein CAT7_00695 [Carnobacterium sp. AT7] gi|159873237|gb|EDP67334.1| hypothetical protein CAT7_00695 [Carnobacterium sp. AT7] Length = 487 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 138/527 (26%), Positives = 226/527 (42%), Gaps = 111/527 (21%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +++ K ISA +L++ + IE N +NA + +KA A AE D + G+ Sbjct: 16 QVQDKKISAKDLIEESFRIIEKENPVLNAVTHMRKEKALAEAETRDF-----SNQVFGGV 70 Query: 75 PIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 PI +K T G + S++L S + L G V++G+ N+ EFA + Sbjct: 71 PILLKGIGQTLAGEPNTSGSYLLKEAVAQTTSHYVRALERAGFVVIGQTNVPEFAFKNIT 130 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E YGP +PW TPGGSSGG+SA+VA + + +D GGSIR PASFTG Sbjct: 131 EPELYGPARNPWNL-----THTPGGSSGGASASVAAGMVPIAGASDGGGSIRIPASFTGL 185 Query: 194 VGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 VG+KPT GR + +SFA +T+++RD+A +L A+ A Sbjct: 186 VGLKPTRGRTPIGPGVGRSWQGASVSFA--------LTKSMRDTAAMLDALQVLQPAAAF 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDA 295 L P Y ++ + PK +R+ + +S + + + WL+ Sbjct: 238 QTPLFEPGY-------LKTLLYAQPKTFRVAFSLESPIGTAVSEEAKRAVLKTVKWLEAN 290 Query: 296 GAKIVEISLPHTQ--YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G ++ E P + +YY+++ E ++ + + Sbjct: 291 GHQVTE-KKPDIDGIKLMKSYYVMNSGETAAMM--------------------------V 323 Query: 354 GFGQEVKHRIMI-----GTYVL------SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 G + +K + I GT+VL +S S+ L + DF E + D Sbjct: 324 GIEESLKRPLTIDDMELGTWVLYNAGKSTSAANYSNTLATWDQAAEVMADFNETY----D 379 Query: 403 VILTPTTPTSAFPLG---KEENNSGSMGHIYN-----------DVFTVAV---------N 439 + LTP T +A +G ++E M HI D+F ++ N Sbjct: 380 LYLTPATADAAPEVGVQWQDEFVLDQMRHIGEFSMAQQQQIIWDMFDKSLAITPFGMQAN 439 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + G P+IS+P L + +PLG+Q RE+ L +GQ +E++ + Sbjct: 440 LTGQPSISLPVHLTDSGLPLGVQFTAPKGREDWLLLIGQALEEDGQF 486 >gi|116695117|ref|YP_840693.1| amidase [Ralstonia eutropha H16] gi|113529616|emb|CAJ95963.1| Amidase [Ralstonia eutropha H16] Length = 508 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 122/432 (28%), Positives = 192/432 (44%), Gaps = 36/432 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD G+ T A + L G ++ V ++L + GA++L K N+ E A G Sbjct: 92 LHGIPVLVKDNIECGGMETTAGAACLRGNLSADDAFVIRRLREAGAIVLAKTNLHELASG 151 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ G ++P+ D T TPGGSSGG+ A +A IGTD SIR PAS Sbjct: 152 GETVSTLSGQTLNPY---DLTR--TPGGSSGGTGAGIAASFGLLGIGTDGVNSIRSPASA 206 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLP 249 VG++PT G SR G++ + D G ITRTV D+A+LL IAG+D D T P Sbjct: 207 NNLVGLRPTMGLVSRAGLVPCGLTQDTIGPITRTVADTALLLDVIAGHDPADPVTSQGAP 266 Query: 250 -VP-DYERALDQ-SIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +P Y +LD+ ++G +G+ + + D + ++ Q ++ + GA+++ I Sbjct: 267 HIPASYAASLDRDGLRGARIGVLRHFFGDQDVHRPVNAVMQAALATIAAQGAELIAIEDA 326 Query: 306 HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRI 363 + L A ++ E +L Y G+ G+ V +DI+ S+ + Sbjct: 327 ISPDELLASTLVHHYEMERDLDAYLAGLPPGVPVRSMQDIIAAGSVHPSVAGTLTTAAAL 386 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 R LR R ++ L+ R +A AFP + Sbjct: 387 SEREGEYRERLQRQQALRQR-LQDLMARHRLDAL---------------AFP--HQRRLV 428 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAAL------CEKKMPLGLQLIGQPFREETLFSVG 477 +G + V + G PAI +PA + +P+GL+ G PF E L + Sbjct: 429 APVGETQAERNGVLASATGFPAIVIPAGFSAPDGNAPQGVPVGLEFFGLPFTEPVLIRLA 488 Query: 478 QIIEKEAGYFRP 489 E+ RP Sbjct: 489 YAAEQALRARRP 500 >gi|229096467|ref|ZP_04227439.1| Amidase [Bacillus cereus Rock3-29] gi|229115391|ref|ZP_04244799.1| Amidase [Bacillus cereus Rock1-3] gi|228668111|gb|EEL23545.1| Amidase [Bacillus cereus Rock1-3] gi|228687029|gb|EEL40935.1| Amidase [Bacillus cereus Rock3-29] Length = 536 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 136/509 (26%), Positives = 221/509 (43%), Gaps = 72/509 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E ++ + +S EL Y IQ + + +NA E+ A + +R +N Sbjct: 73 VDELQNMVDDGKLSYEELTSIYLFRIQEHDQNGISLNAVTEINPNAIEQARKLDKERSLN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A + +L + ++T+ +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVIVKDNVQTAKVMPTSAGTFVLKDWVADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + GYD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRAGIIPLAEALDTAGPMARTVKDAATLFNTMVGYD 307 Query: 240 ECDATCVNLPVPD-YERALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + D + D SI G+ +GI + +D ++ ++DA Sbjct: 308 EKDAMTEKMKDRDRIDYTNDLSIDGLKGKKIGIL--FSVDQQDENRKAVAEKIRKDIQDA 365 Query: 296 GAKIV-EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---- 350 GA + +I L +E NL + Y + D L +N Sbjct: 366 GAILTDDIQL--------------SSEGVDNLQT---LEYEFKHNVNDYLSKQKNVPVKS 408 Query: 351 --RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ R M Y + + + K +F + + Sbjct: 409 LEEIIAFNKKDSKRRM---------KYGQTLIEGSEKSAITKDEFEKVVQ---------- 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPVGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +G+ F E+ LF++G E+++ R K Sbjct: 507 FVGRQFGEKELFNIGYAYEQQSKNRRSPK 535 >gi|162450020|ref|YP_001612387.1| hypothetical protein sce1749 [Sorangium cellulosum 'So ce 56'] gi|161160602|emb|CAN91907.1| gatA2 [Sorangium cellulosum 'So ce 56'] Length = 534 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 135/518 (26%), Positives = 226/518 (43%), Gaps = 71/518 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L +++IS+ EL +++ IE ++ A+ +V+ +A AAA D+ GD R L G+ Sbjct: 19 LSAREISSEELTRAHLARIEALEPRLRAFTQVLRDEALAAARGLDEERRRGDVRGPLHGL 78 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +K+ G+ + G R ++TVT L GAV+LG+ N+ + + + Sbjct: 79 PITVKESLDMAGMASTLGVASRKGHRATSDATVTALLRRAGAVILGRTNVSQLLLYNEAR 138 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW S+D +PGGSSGG +AA+A + IGTD GGSIR PA G V Sbjct: 139 NPLFGQTANPW-SLD----HSPGGSSGGEAAAIAAGMSPLGIGTDIGGSIRVPAHCCGIV 193 Query: 195 GIKPTYGRCSRLG----IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G+KPT R + G ++ Q G + R+ RD A+++ + D +++ V Sbjct: 194 GLKPTLDRWTNKGSNTALLGQEAIRAQIGPMARSARDVALVMSEL---DPASMAELDVRV 250 Query: 251 PDYERALDQSIQ--GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + S++ + VG + L S + + + S L+ GA +V + P Sbjct: 251 PPFPIVEPGSVEVARLRVGFYCDDGLVPPSTAVARAVTKAASALRARGATVVPFTPPGIP 310 Query: 309 YALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIG------------- 354 A+ AY+ A+ ++ L+ D G EG DI + R++ Sbjct: 311 DAVYAYFAALSADGGATALSLLDAGEDGR--EGTDIDVSLRSLRTMASLPPLARRAAARV 368 Query: 355 ---FGQEVKHRIM--IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 G+ R++ G +S +H L R+ R I + + +D++L P Sbjct: 369 AGLAGERRLQRLLEVTGPKSVSEFWRTTHAL--REARAAIA---SAMRAEALDLLLCPPY 423 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP-------------------- 449 T A P ++ S + + N+ PA VP Sbjct: 424 ATPALP------HAASRDFVLAGSAAMLWNLTQFPAGVVPVTRVRPEEARRERPRDRLEK 477 Query: 450 -AALCEKK---MPLGLQLIGQPFREETLFSVGQIIEKE 483 AA + K +P+G+Q++G PF E + + IE E Sbjct: 478 RAAEVDAKSVGLPVGVQVVGFPFTEHVVMAAMIAIEDE 515 >gi|322705561|gb|EFY97146.1| amidase [Metarhizium anisopliae ARSEF 23] Length = 531 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 129/478 (26%), Positives = 210/478 (43%), Gaps = 80/478 (16%) Query: 46 EVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDG--FRP 101 E+V + ARA+ E R G L+G+PIG+KD KG ++ + D F+ Sbjct: 78 ELVFEAARASTE----RWAAGKPLGILDGVPIGVKDDVNVKGYVNHNGMRYNADSPFFKR 133 Query: 102 HYEST-VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +S Q L D GAV+LGK M E + G SP +++ ++ PGGSS Sbjct: 134 QEKSAWCVQALQDAGAVVLGKNRMHELGSDTCGLNVAQG---SPTNHLNT--EYYPGGSS 188 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 G ++AV + S+ TD GGSIR PASF G G+K ++ R +G ++ G Sbjct: 189 SGPASAVCAGVVPFSVATDAGGSIRIPASFNGLYGLKTSHHRTGYMGS-----TMCITGP 243 Query: 221 ITRTVRDSAILLKAIAGYDECDATC-----VNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 I V D I + ++ + D P P +R + G+ +E+ L+ Sbjct: 244 IAANVADLTIAYRLMSQPNPDDGIQGVFGRSTPPPPSTKRVM---------GVYREW-LN 293 Query: 276 YLSPTIDKTWQQGISWL-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 P + + + + + K+ G +IV+ISLPH A A+ +I E + R Sbjct: 294 AADPEVIEHCNEALDYFAKERGYEIVDISLPHLADAQLAHGMICITEMAEAARRR----- 348 Query: 335 GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 V D L + + +R+++ + + + +L+ +RT++ R F Sbjct: 349 --TVNPADWLSLVGSV----------NRLLM---TVGQQTPAADFLKFNTMRTVLMRHFA 393 Query: 395 EAFEQ--GVDVILTPTTPTSAFP-------LGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 F + G+ +I++PTTP + +P LG + N+ N ++ NM G P+ Sbjct: 394 FLFRKYPGM-LIMSPTTPLNGWPKHPSDEALGMNDANT----TFRNMMYIFLANMTGTPS 448 Query: 446 ISVPAALC-----EKKMPLGLQLIGQPFREETLFSVGQIIEK------EAGYFRPHKW 492 +SVP E K+P+GL G+ EE L + E+ E G RP W Sbjct: 449 VSVPVGYAAPKQGEGKIPVGLMATGEWGSEEQLLAFAGEAEEYLHGIYEEGRRRPSAW 506 >gi|317048129|ref|YP_004115777.1| amidase [Pantoea sp. At-9b] gi|316949746|gb|ADU69221.1| Amidase [Pantoea sp. At-9b] Length = 499 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 139/505 (27%), Positives = 229/505 (45%), Gaps = 63/505 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L + SE+R + K I+ EL++S I IE N +NA + ARA A+ D Sbjct: 1 METLCDLPASEARRLIGDKSIAPSELLESCITRIEQVNPAINAMVACDFAAARANAQAQD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 K ++ G+ L G+P+G+KD G+ T S + + L GA ++ Sbjct: 61 KAVLRGEPLGPLHGLPLGVKDMIDAAGLPTTFGSVAKRHNLAQQDERLVAVLRAAGANVV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ E+ G ++ + YG +P+ D+T GSSGGS+AA+A + + + G+D Sbjct: 121 GKTNVPEWGAGGNSRNAVYGTTGNPF---DTTRSAA--GSSGGSAAALACGMVSLATGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGR-------CSRLGIISFAPSLDQAGIITRTVRDSAILL 232 TGGS+R PA+F G VG +PT G C+ L I + P + RTV D+A++L Sbjct: 176 TGGSLRNPAAFNGVVGFRPTAGLIPAEKRGCAWLQISTLGP-------MGRTVDDAALML 228 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 + G D D L + G + P+E+ + PT D + + ++W Sbjct: 229 SVMQGADARD-------------PLSHVVPGRQLRQPQEF---FPLPTTDLSSLR-LAWS 271 Query: 293 KDAG--------AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 D G A L H +P +N A ++ +R L + G Sbjct: 272 SDFGFAPTEQGVADSFRQKLTHITPLFARAEQATPDCQGANEA-FETLRSLLFLTGTR-- 328 Query: 345 EMY-ENTRSIGFGQEVKHRIMIGTYVLSSRCYD-SHYLRARKIRTLIKRDFTEAFEQGVD 402 E+Y +N + G+ V+ I G L D +H L ++T + R + EAF D Sbjct: 329 ELYQQNPHQV--GENVRMNIEEG---LRYSALDIAHGL---DLQTQLYRRW-EAFFHDYD 379 Query: 403 VILTPTTPTSAFP----LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 +++P S P +E N + + + ++AGLP++S+P + MP Sbjct: 380 YMVSPAVTISPRPWTELYPREINGQPTRTYYHWLALAYVTSLAGLPSLSLPLGKDAQGMP 439 Query: 459 LGLQLIGQPFREETLFSVGQIIEKE 483 GLQ+IG+ + + V + +E++ Sbjct: 440 FGLQIIGKRGDDSGVLRVAKALEQK 464 >gi|242814307|ref|XP_002486344.1| amidase, putative [Talaromyces stipitatus ATCC 10500] gi|218714683|gb|EED14106.1| amidase, putative [Talaromyces stipitatus ATCC 10500] Length = 499 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 16/242 (6%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P +KD F T + T S+ L G + ESTV +L + GA++LGK NM E+ Sbjct: 74 LHGVPFLVKDTFVTMDEMDTTGGSYALLGAKYEVESTVISRLREAGAIILGKTNMSEWGW 133 Query: 130 GSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S + ++ +G + + +K P GSS GS+ A + + ++G +T GSI Sbjct: 134 SRSPKCPNGWSALWGQALGGFH-----EKQDPEGSSSGSAIAACMNMASFTLGGETCGSI 188 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA G VG+KPT G SR G + P D G I+R V+D AI+L+AIAG DE D+ Sbjct: 189 LSPAKRNGVVGLKPTIGLTSRAGTLPVNPEYDTVGPISRYVKDCAIILQAIAGRDEHDSA 248 Query: 245 CVNLP---VPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKI 299 ++P +P Y + G+ + +P+ Y + + +++ + ++ GA I Sbjct: 249 TADIPFDKIPSYADFYSTDGLVGVRIAVPRSIYNVADSDLEVGVAFREAVEKIQSLGAVI 308 Query: 300 VE 301 V+ Sbjct: 309 VD 310 >gi|228985047|ref|ZP_04145215.1| Amidase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774735|gb|EEM23133.1| Amidase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 536 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 219/502 (43%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +NA E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNAVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + YD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRSGIIPLAETLDTAGPMARTVKDAATLFNIMVSYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + DY + L ++G VG+ + +D + Q+ L+DA Sbjct: 308 EKDAMTEKMKDKERMDYTKDLSIDGLKGKKVGVL--FSIDRQDDNRKEVAQKIRKDLQDA 365 Query: 296 GAKIV-EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT---- 350 GA + +I L AE NL + Y + D L +N Sbjct: 366 GAILTDDIQL--------------NAEGVDNLQT---LEYEFKHNVNDFLSKQKNVPVKS 408 Query: 351 --RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ +R + Y + + + K +F + + Sbjct: 409 LEEIIAFNKKDSNRRI---------KYGQTLIEGSEKSAITKDEFEKVVQ---------- 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 +G+ F E+ LF++G E+++ Sbjct: 507 FVGKQFGEKELFNIGYAYEQQS 528 >gi|268533152|ref|XP_002631704.1| Hypothetical protein CBG20903 [Caenorhabditis briggsae] gi|187023157|emb|CAP37837.1| hypothetical protein CBG_20903 [Caenorhabditis briggsae AF16] Length = 535 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 119/505 (23%), Positives = 220/505 (43%), Gaps = 56/505 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ +++ + K+IS+ LV+SYI IE N+ +NA + + +AR A E D + Sbjct: 50 LLLISATQAVRMISKKEISSTALVESYIHRIEQVNNTINAVVVKLFDRARQQATEVDTFM 109 Query: 64 INGDARDLE---------GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 D D++ G+P +KD + + + ++L Sbjct: 110 ALADEEDIQKKIEEKPLYGVPFTMKDALEVENEIVTCGVFNRKSTKCERTAEAIKRLQAA 169 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G ++L N+ E M + + YG +P+ + T GGSSGG A + Sbjct: 170 GGILLAITNVPEVCMWVESVNTIYGRSKNPYDARRMT-----GGSSGGEGALLGAAGSVV 224 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII----SFAPSLDQAGIITRTVRDSAI 230 +G+D GGSIR P+ F G G+KPT G +G + + + + G + R D + Sbjct: 225 GVGSDIGGSIRMPSFFNGVFGLKPTPGVIPLIGHVPEPTGYKTHMLRIGPMCRFAEDLPL 284 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALD----QSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 +L+ +AG +A +NL P + L + I G + P E + Y + Sbjct: 285 MLRIMAGE---NAKSLNLHEPVNGKKLRIFYMEGITGSPIIQPLEEDMRY-------ALK 334 Query: 287 QGISWLK---DAGAKIVEISLPHTQYALPAYYIISPAEASSNLA--RYDGVRYGLRVEGK 341 + +++L+ D A+ +I LP ++ + Y+ +S E +++ A + G + E Sbjct: 335 KAVNFLERKYDVVAQ--QIELPSARHVM-EYFTLSMHEDTTDPAFNKLMLCTNGTKGEVN 391 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSR---CYDSHYLRARKIRTLIKRDFTEAFE 398 E+++ G I+ G ++ SR +SH R +KR E Sbjct: 392 CYTELFK--YFTGNSNHTLSGIIAG--IIDSRDPPFSESHTKDLLYKRDRLKRQVKELL- 446 Query: 399 QGVD-VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 G D ++L P+ P +A ++ + +N +T N+ +P + P L + Sbjct: 447 -GNDGILLFPSWPCTAM------FHNEPILAPFNFCYTALWNVLSVPVVQCPLGLDSHGL 499 Query: 458 PLGLQLIGQPFREETLFSVGQIIEK 482 PLG+Q+IG + + L ++ Q++E+ Sbjct: 500 PLGVQVIGNQYTDRNLIAIAQVLEE 524 >gi|196047048|ref|ZP_03114267.1| amidase family protein [Bacillus cereus 03BB108] gi|225863883|ref|YP_002749261.1| amidase family protein [Bacillus cereus 03BB102] gi|196022152|gb|EDX60840.1| amidase family protein [Bacillus cereus 03BB108] gi|225789164|gb|ACO29381.1| amidase family protein [Bacillus cereus 03BB102] Length = 536 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 142/518 (27%), Positives = 222/518 (42%), Gaps = 90/518 (17%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIEDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ VA Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVAADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 +IGT+T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAIGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQ 286 A+ GYDE D + V D ER D SI G+ +G+ + +D + Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAE 356 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + L+DAGA + E YI NL + Y + D Sbjct: 357 KIRKDLQDAGAILTE-------------YIQLNNGGVDNLQT---LEYEFKHNVNDYFSQ 400 Query: 347 YENT------RSIGFGQE-VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 +N I F +E K RI G ++ + ++ I +D FE+ Sbjct: 401 QKNVPVKSLEEIIAFNKEDSKRRIKYGQTLIEASE-----------KSAITKD---EFEK 446 Query: 400 GVDVILTPTTPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 V TS KE E ++ I N+ ++ +AG P ++VPA Sbjct: 447 VVQ--------TSQENAKKELDSYLVEKGLDALVMINNEEVLLSA-VAGYPELAVPAGYD 497 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G +G+ F E+ LF++G E+++ +P K Sbjct: 498 NNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|229079129|ref|ZP_04211678.1| Amidase [Bacillus cereus Rock4-2] gi|228704146|gb|EEL56583.1| Amidase [Bacillus cereus Rock4-2] Length = 536 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 222/502 (44%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ +++I + E FE V Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGSE-----------KSVITK---EEFENVVQ------ 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 +G+ F E+ LF++G E+++ Sbjct: 507 FVGKQFGEKELFNIGYAYEQQS 528 >gi|113475075|ref|YP_721136.1| amidase [Trichodesmium erythraeum IMS101] gi|110166123|gb|ABG50663.1| Amidase [Trichodesmium erythraeum IMS101] Length = 446 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 123/477 (25%), Positives = 199/477 (41%), Gaps = 68/477 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R + +S E+V +Y+Q I N Q+NA I + ++ +++D+ + G L G+ Sbjct: 15 IRERLVSCEEVVTAYLQRISYYNPQLNAIITLDPEQVDQQVKKADRALAKGKCFGPLHGV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI IKD TKG+ T L + P ++TV KL GA++LGK N + Sbjct: 75 PITIKDSLETKGLRTTCSYEPLANYIPRKDATVVAKLKAAGAIILGKTNTPKLTGDFQTN 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW ++D +TPGGS+GG +A+A L IG+D GGS+R PA F G Sbjct: 135 SPLFGRTNNPW-NLD----YTPGGSTGGGGSAIAAQLSVFDIGSDLGGSLRIPAHFCGIY 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 IK T R S G I P L + ++ L +++ C + Sbjct: 190 TIKATEKRVSTYGHI---PELPGNPLTINHCQNVGYLGRSVEDLMLC-----------FS 235 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI------SWLKDAGAKIVEISLPHTQ 308 + + QG+ I L+ + W G S K A ++++ L Sbjct: 236 VIKESNHQGLNEKINSFSSLN----SYGFVWSYGFGNIPCCSETKKAIKTVIDV-LSELD 290 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 Y L NL++ + ++ E+Y N S F Sbjct: 291 YQL----------EYRNLSQ---------INMDEVWEIYRNILSYEFNPS---------- 321 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + + +Y+ A + R +I F Q VD+ L P P AFP N+ G Sbjct: 322 --TPKDEQKNYMIALEKRQMIMNQLA-LFFQKVDIWLIPVVPFPAFPRFPFGNDIDIEGK 378 Query: 429 IYN-----DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 Y +T N+ G P + +P L K +P+G+QL+G ++ L ++ I Sbjct: 379 SYPYFQAIGAYTTLFNLTGYPVVVIPLTLSSKGLPIGVQLVGNYGNDQKLLTIANQI 435 >gi|229916076|ref|YP_002884722.1| Amidase [Exiguobacterium sp. AT1b] gi|229467505|gb|ACQ69277.1| Amidase [Exiguobacterium sp. AT1b] Length = 469 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 137/503 (27%), Positives = 225/503 (44%), Gaps = 73/503 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + + + + + +A ++ Y+ I N +++A I+V A AE +D+ Sbjct: 6 QLHELTIERAHRGYKEGEFTARDVTAYYLGRIATYNERLHAVIQV-NPDALFEAEAADRA 64 Query: 63 IINGDARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G + L GIP+ IKD T G+ T A + + ++ + ++L +GA++LGK Sbjct: 65 YRKGVRKPLLGIPVLIKDNIETNGLMRTTAGAAAMRHHFAARDAELVKRLRVDGAIILGK 124 Query: 122 LNMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 N+ E+A + + ++ G ++P+ DK GGSS GS++AVA L ++ Sbjct: 125 ANLSEWANFLTEDMPNGWSAVGGQTMNPY-----GDKLDVGGSSSGSASAVAANLTLLAV 179 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G++T GSI P+ VGIKPT G SR GII + S D AG + RT+RD+ I L+ + Sbjct: 180 GSETSGSIVHPSVHNSIVGIKPTVGLISRSGIIPISRSQDTAGPMARTLRDAVIALQTMC 239 Query: 237 GYDECDATCVNLPV-PDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKT----WQQGIS 290 G D D PV P Y LD + GM VG ++ P I + ++ + Sbjct: 240 GEDSADPATWETPVGPPYVTCLDVRQAVGMRVG--------FVKPDISEEEVGLYEGALR 291 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV----------EG 340 L+ A ++VE++LP + AL I+ +D + G+ Sbjct: 292 LLRQAEVELVEVTLPKHE-ALEQADIL-----------FDEFKLGVEAYLANTTVPFKTL 339 Query: 341 KDILEM-YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 D++E E+ SI GQ I S + +++YL R+I D A + Sbjct: 340 SDLIEWNAEHPESIPHGQT----IFEEANAKSGKLTEANYLN-RRI-----EDVRLAKTE 389 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 G+D +L + A L + N + +A AG P I++P E P Sbjct: 390 GIDALLA-SHKLDALVLPHDMN------------YDMAAK-AGHPTITIPYKRKESGAPF 435 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 GL G + E L V E+ Sbjct: 436 GLSFTGTSYAERDLIRVAYAFEQ 458 >gi|90020775|ref|YP_526602.1| amidase family protein [Saccharophagus degradans 2-40] gi|89950375|gb|ABD80390.1| Amidase [Saccharophagus degradans 2-40] Length = 598 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 122/475 (25%), Positives = 199/475 (41%), Gaps = 65/475 (13%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +LRS+ ++ + +++I ++ + Q+ Y +A K D L G+ Sbjct: 28 QLRSQALAQADF-NAWITLLDEA--QLEPYFVALANKEM-------------DELALYGV 71 Query: 75 PIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P IKD G+ T AC + P + V + L GA+ LGK N+D+FA G Sbjct: 72 PFAIKDNIDLAGVPTTAACPDFT--YVPELSAPVVEALISAGAIPLGKTNLDQFATGLVG 129 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 S YG + + ++ GGSS GS+ A A A ++GTDT GS R PA Sbjct: 130 TRSPYGEGKNVFN-----QEYISGGSSAGSAIATALGQVAFALGTDTAGSGRVPAVLNNL 184 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 +G KPT G S G++ +LD I D+A +L+ A YDE DA + Sbjct: 185 IGHKPTKGLLSTRGVVPACRTLDCVSIFALHAEDAAQVLEVAAQYDEQDAYARVNTYANK 244 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 +R G+P E LD+ + +Q+ + L+ +G V IS Sbjct: 245 KRYFGAVPSSFKFGVPDE--LDFFGNSETQALFQKSVEQLQQSGGTPVSISF-------- 294 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE---VKHRIMIGTYV 369 A +I EA+ L EG + E + T+++ ++ I G Sbjct: 295 APFI----EAAK-----------LLYEGPWVAERWLATQNVKLESMLPVIQTIIGNGNNG 339 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT--SAFPLGKEENNSGSMG 427 +S + + Y A RT + QG+D ++ PT PT + +G++ + S+ Sbjct: 340 KASDAFAAQYRLAELKRT------CDGIMQGLDCVIAPTMPTVFTRAQIGEQPVKNNSIL 393 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 Y + +N+ A +VP + G+ L G F + TL S I+++ Sbjct: 394 GTYTNF----MNLLDYSATAVPVGFLSSGVGWGVTLFGNAFTDVTLLSFANILQR 444 >gi|255539997|ref|XP_002511063.1| Glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Ricinus communis] gi|223550178|gb|EEF51665.1| Glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Ricinus communis] Length = 581 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + +R+K I++ ELV +++ ++ N + A + + A A+E+D+ Sbjct: 121 DIAFMSVLELGELIRTKQITSEELVQIFLKRLKRYNRALEAVVTYTDELAYKQAKEADEL 180 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S + ++ V ++L GAV++ K Sbjct: 181 LAKGVYLGPLHGIPYGLKDIIAVSGYKTTWGSRSFKDQVLNIDAWVYKRLRSVGAVLVAK 240 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ +G + A IG++T Sbjct: 241 LVSGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSSGMVPFA-IGSETA 292 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PAS G ++PT G R G++S + SLD+ G R+ D +I+L A+ G D Sbjct: 293 GSITYPASRCGVTALRPTLGTVGRTGVMSISESLDKLGPFCRSAADCSIVLDALRGKDPD 352 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + +P+ D I +TVG +D + + LK+ G +V Sbjct: 353 DLSSREIPLND---PFSVDITRLTVGY------------LDDAEMEVVHVLKEKGVNMVP 397 Query: 302 ISLPHT 307 L +T Sbjct: 398 FKLNYT 403 >gi|83592319|ref|YP_426071.1| amidase [Rhodospirillum rubrum ATCC 11170] gi|83575233|gb|ABC21784.1| Amidase [Rhodospirillum rubrum ATCC 11170] Length = 485 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 117/483 (24%), Positives = 207/483 (42%), Gaps = 56/483 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD---- 70 R+ + +S E++ + + I+ N + A + + + + + DA+D Sbjct: 19 RIHHRAVSCREVMAATLARIDRFNPAVTALVSL---------RDREDLLREADAKDALLG 69 Query: 71 -------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 L G P KD AT+GI T S + P ++ ++L GA+ +GK N Sbjct: 70 KGLSQGPLHGFPQAPKDLAATRGIATTRGSPLFRHQIPKQDAIFVERLRAGGAIFVGKTN 129 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF +GS +G + + + T GGSSGG++ A+A + A + G+D GS Sbjct: 130 TPEFGLGSQTYNPVFGATGNAY-----DPRLTAGGSSGGAACALALGMLAVADGSDMMGS 184 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIIS--FAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 +R PA+F G +P+ GR G++ F L G + R+V D A+LL +AG+D Sbjct: 185 LRNPAAFNNVFGFRPSAGRVPH-GVVPDLFFQQLGYDGPMGRSVADLALLLSVMAGFDAR 243 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKI 299 + + + L+ S+ G+ VG + YL+ P I + Q ++ L D G + Sbjct: 244 APQSLAGDPAVFAQPLEGSVAGVRVGWLGDLG-GYLAFEPGILELCQGALATLGDLGCVV 302 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQE 358 E + + L A + A ++L + + D+ +Y + + E Sbjct: 303 DEAT---AGFPLDALW-----TAWTDLRSF--------LVAGDLGPLYADPVKRAQMKPE 346 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRA---RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 I G + + + + R+ R++ L +R A TP Sbjct: 347 AIFEIERGLALSGPQVFAASARRSAWYRRMLVLFERFDVLALPSAQVFPFEHATPWPRAI 406 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G+ ++ H + +V V +MAG+P ISVP +P+GLQ+IG+P + +L Sbjct: 407 AGRTMDSY----HRWMEV-VVPASMAGVPVISVPVGFNAAGLPMGLQVIGKPRDDLSLLR 461 Query: 476 VGQ 478 + Sbjct: 462 LAH 464 >gi|307727244|ref|YP_003910457.1| Amidase [Burkholderia sp. CCGE1003] gi|307587769|gb|ADN61166.1| Amidase [Burkholderia sp. CCGE1003] Length = 513 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 140/491 (28%), Positives = 225/491 (45%), Gaps = 63/491 (12%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-AR 69 E R + +K+IS VEL+D+ I IE N +NA +ARA A+ ++K++++G+ Sbjct: 19 ELRRMIGTKEISPVELLDACIARIEAVNPAVNAITATDFARARALAKRAEKQVLDGEPLG 78 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+G+KD T G+ T S + G P + + ++L GA++ K N+ E Sbjct: 79 LLHGLPLGVKDLENTAGLLTTYGSPMSRGNVPAQDVVLVERLRAAGAIVTAKTNVPELGA 138 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ +G +P+ + GGSSGGS+AA+A + G+DTGGS+R PAS Sbjct: 139 GANTRNPVWGATGNPFNT-----ALNAGGSSGGSAAALACDMLPVCTGSDTGGSLRIPAS 193 Query: 190 FTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG +PT G + ++ ++P + G + RTV D+ + L A AG D Sbjct: 194 KCGVVGFRPTPGLVPNSRKLVGWSP-ISVVGPMGRTVADACLQLAATAGISAGD------ 246 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP--- 305 L ++ + +P + L L + W +D G+ V+ S+ Sbjct: 247 -------PLSFAVDPLGFAVPADIDLGTLR----------VGWTEDFGSCDVDASIRTVF 289 Query: 306 HTQYALPAYYIISPAEASSNLAR----YDGVRYGLRVEG-KDILEMYENTRSIGFGQEVK 360 + AL A + S E +L +D +R V G D + N G + Sbjct: 290 RERMALIAPFFRSCEEVRFDLGDVHRCFDVIRAESFVAGLHDAYTLDPNQ----LGPNTR 345 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---- 416 +G S DS + +A + R I + F AF+Q DVI +PTTP S FP Sbjct: 346 ANYELGA---SMSLADSAWAQAEQTR--IFKRFQAAFQQ-YDVIFSPTTPVSPFPWQQLY 399 Query: 417 -----GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 G+E++N + T V + PA+S+P L MP GLQ++G + Sbjct: 400 AAQIDGREQDN-----YYRWLALTYVVTLTTHPAVSLPCGLDHAGMPFGLQIVGPFHGDR 454 Query: 472 TLFSVGQIIEK 482 +V +E+ Sbjct: 455 KTLAVAHALEQ 465 >gi|229178352|ref|ZP_04305721.1| Amidase [Bacillus cereus 172560W] gi|228605082|gb|EEK62534.1| Amidase [Bacillus cereus 172560W] Length = 536 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 222/502 (44%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR+GII +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRIGIIPLVETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ +++I + E FE V Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGSE-----------KSVITK---EEFENVVQ------ 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 +G+ F E+ LF++G E+++ Sbjct: 507 FVGKQFGEKELFNIGYAYEQQS 528 >gi|222080812|ref|YP_002542540.1| allophanate hydrolase [Agrobacterium radiobacter K84] gi|221725491|gb|ACM28580.1| allophanate hydrolase [Agrobacterium radiobacter K84] Length = 604 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 130/466 (27%), Positives = 210/466 (45%), Gaps = 61/466 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S ++LV+ I + S+ + RAAA+ R + ++ L GIP IKD Sbjct: 19 LSPLDLVEEVIIRRKASDDPAIFITPTPDDELRAAAKALISRAPDPNSLPLWGIPFAIKD 78 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 G+ T A +RP ++TV +L GA+++GK N+D+FA G + S +G Sbjct: 79 NIDVAGLPTTAACPAF-AYRPDKDATVVARLRAAGALVIGKTNLDQFATGLNGTRSPHG- 136 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +P RS+ D + GGSS GS+ A A L + ++GTDT GS R PA+F VGIKPT Sbjct: 137 --AP-RSVFDKD-YVSGGSSSGSAVATASGLASFALGTDTAGSGRVPAAFNNLVGIKPTP 192 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 G +G++ S+D I TV D + K + GYD D P +A S Sbjct: 193 GLVPNVGVVPACRSVDVITIFAATVGDGVAIRKVMEGYDVAD--------PFSRKAAPAS 244 Query: 261 I--QGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII 317 + G+ VG+ ++ + ++ + I + GA IV + Sbjct: 245 LPASGLRVGVLDGAEREFFGNEHVEALYDAAIERARSLGATIVP-------------FDY 291 Query: 318 SPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 +P ++ L Y+G R+ KD L + + F V+ T + +R YD Sbjct: 292 APFRQAAEL-LYNGPWVAERLAAVKDFL----TSNAADFDPNVR------TIIEGARAYD 340 Query: 377 S-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-------AFPLGKEENNSGSMGH 428 + R +++ E +E+ D+++ PT+PT+ A P+ K +G G Sbjct: 341 AVDAFEGRYKLEALRQKTREEWEKA-DILMLPTSPTTYTVEEMIADPITK----NGHFGR 395 Query: 429 IYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETL 473 +T VN+ AI++PA +P G+ LIG F ++ L Sbjct: 396 -----YTNFVNLLDCAAIAIPAGFDANGHLPAGVTLIGPAFTDDAL 436 >gi|228907669|ref|ZP_04071526.1| Amidase [Bacillus thuringiensis IBL 200] gi|228852161|gb|EEM96958.1| Amidase [Bacillus thuringiensis IBL 200] Length = 536 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 128/496 (25%), Positives = 220/496 (44%), Gaps = 60/496 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGTTLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKRLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV-- 464 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F Sbjct: 465 -----------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQF 512 Query: 469 REETLFSVGQIIEKEA 484 E LF++G E+++ Sbjct: 513 GERELFNIGYAYEQQS 528 >gi|269127198|ref|YP_003300568.1| amidase [Thermomonospora curvata DSM 43183] gi|268312156|gb|ACY98530.1| Amidase [Thermomonospora curvata DSM 43183] Length = 445 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 137/496 (27%), Positives = 197/496 (39%), Gaps = 90/496 (18%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M N +V+E R + ++V+ ++ IE S S + AY V+ + ARA A D Sbjct: 5 MDTWNGWSVAELHALYRGGKATPSQIVEECLRRIEASGS-LGAYTAVLDETARAEAARLD 63 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +R+ + L G+P+ +K+ G S G ++ ++L GA+++G Sbjct: 64 RRMGHEPMGPLFGVPVAVKELIDVAGAEIGYGSRAFAGRIATADAEAVRRLRAAGAIVVG 123 Query: 121 KLNMDEFAMG-SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA-GFLCAASIGT 178 EF S + + PV +PW PGGSS GS+ AVA G +C A +GT Sbjct: 124 VTRSPEFGWSLSGRDAASPAPVANPWDPARD-----PGGSSSGSAVAVATGTVCLA-LGT 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GSIR PA+ G G KPT G S G+ + S D G + T RD +A+ G+ Sbjct: 178 DTAGSIRMPAALCGVWGFKPTRGAVSDRGVRLLSRSFDHVGPLAGTPRDLQAAYEALGGW 237 Query: 239 D------ECDATCVNLPV----PDYERALDQSIQGMTVGIPKEYRLDYLSP--TIDK--- 283 + T V P PDY AL + T + D+ P ID Sbjct: 238 PASPQDAQPPGTVVVAPRDGLHPDYAEALTAAADRFTALGWRVLTEDFAPPEDVIDGYMM 297 Query: 284 -TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA---EASSNLARYDGVRYGLRVE 339 +G D VE+ Q L A + ++ A +A +ARY R GL Sbjct: 298 MLLHEGARLYADEPGSSVELCTEPVQEMLRAGHGVTDALYRDARRTVARY---RDGLLA- 353 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY-DSHYLRARKIRTL-IKRDFTEAF 397 R+ GT +L C H RA T R F +A Sbjct: 354 ----------------------RLDPGTLLLGVVCPGPPHPSRAATAVTAGGPRPFVQA- 390 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 ++ T P S +AGLPA++VPA M Sbjct: 391 ------VIPWTLPQS---------------------------IAGLPAVAVPAGRDRDGM 417 Query: 458 PLGLQLIGQPFREETL 473 P+GLQL G P R+ T+ Sbjct: 418 PIGLQLSGAPGRDGTV 433 >gi|315056067|ref|XP_003177408.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma gypseum CBS 118893] gi|311339254|gb|EFQ98456.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma gypseum CBS 118893] Length = 571 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 20/302 (6%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 +D L ++V+LV++Y+ I NS + A E+ A A + D+ G R L Sbjct: 74 QDGLTKGCFTSVDLVNTYVARIAEVNSTVRAVTEI-NPDALTIARQMDRERKQGKLRGPL 132 Query: 72 EGIPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-- 128 G+PI IK+ F + + A S+ + G R ++TV KL + G V++GK ++A Sbjct: 133 HGLPIVIKNNIFTDDKMSSTAGSYAIFGARTSADATVAAKLREAGLVIMGKTGASQWANF 192 Query: 129 --MGSSNETSYYGPVISP--WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + S+N S +G ++ ++ D P GSS GS A L A++GT+T GSI Sbjct: 193 RSINSTNGWSAFGGQVTAAYIKNQD------PSGSSSGSGVASDLGLAFATLGTETSGSI 246 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA + VG+KPT G SR ++ + D G +TR+V+D+A LL+ IAG D D Sbjct: 247 VSPAEKSNIVGLKPTVGLTSRRFVVPVSERQDTIGPMTRSVKDAAYLLQVIAGKDSNDNY 306 Query: 245 CVNLP---VPDYERALD-QSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKI 299 +P +PDY +A D +++G +G+P+ + S T + Q ++ +K AGA I Sbjct: 307 TSAIPFDTIPDYVKACDINALKGKRIGVPRNVIKIFGSQKTAVAQFNQALAVMKKAGAII 366 Query: 300 VE 301 VE Sbjct: 367 VE 368 >gi|83717180|ref|YP_440518.1| amidase [Burkholderia thailandensis E264] gi|83651005|gb|ABC35069.1| amidase family protein [Burkholderia thailandensis E264] Length = 540 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 139/483 (28%), Positives = 222/483 (45%), Gaps = 46/483 (9%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IH 88 I I+ ++NA IE+ A A+ D G AR L G+ + +KD AT + Sbjct: 72 IARIDRDGPRLNAIIEL-NPDAEVIAQALDAEQAAGAARGPLHGVTVALKDNIATGDRMS 130 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRS 147 T A S LDG R ++ + +L GAV++ K N+ E+A S+ TS + R+ Sbjct: 131 TTAGSLALDGVRATRDAHLVAQLRRAGAVIVAKTNLSEWANFRSTRSTSGWSARGGLSRN 190 Query: 148 MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 + D+ T G SSG + A A L A ++GT+T GSI PA+ G VG+KPT GR SR G Sbjct: 191 PYALDRTTSGSSSGSAVAVAA-GLVAMAVGTETDGSIVSPAALNGCVGLKPTVGRVSRDG 249 Query: 208 IISFAPSLDQAGIITRTVRDSAILLKAIA-GYDECDATCVNLPVPDYERALD-QSIQGMT 265 I+ + + D AG I RTV D+A LL A+A G A DY ALD +++G Sbjct: 250 IVPLSHTQDTAGPIARTVLDAARLLGALAGGDANDPAAASAPAPADYVAALDANALRGAR 309 Query: 266 VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASS 324 +GI + Y + +D ++ I+ ++ GA +++ + LP Y E Sbjct: 310 IGIARAYFTGH--DEVDAQIERAIAQMQRLGAIVIDPVDLPKPDY-----------EGDE 356 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRS----IGF--GQEVKHRIMIGTYVLSSRCYDSH 378 ++GL + + R+ I F Q V+ G +L R ++ Sbjct: 357 KTVLLHEFKHGL-PQWLRAFAPHARVRTLADVIAFNDAQRVREMPYFGQELL-LRAQEAG 414 Query: 379 YLRARKIRTLIKRDFTEAFEQG---------VDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L A R + R A ++G +D ++ PT T A+ + + G G Sbjct: 415 GLDAAAYREALARCGRRARDEGLAHVLREQRLDALVAPTEGT-AWLIDLINGDCGGEG-- 471 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 F+ +AG P ++VPA L + +P+G+ +G P+ E L ++G E+ + R Sbjct: 472 ----FSTPAAVAGFPHLTVPAGLV-RGLPVGVSFVGAPWSEARLLALGYAFEQATQWRRE 526 Query: 490 HKW 492 ++ Sbjct: 527 PRF 529 >gi|169616900|ref|XP_001801865.1| hypothetical protein SNOG_11626 [Phaeosphaeria nodorum SN15] gi|111060214|gb|EAT81334.1| hypothetical protein SNOG_11626 [Phaeosphaeria nodorum SN15] Length = 602 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 115/494 (23%), Positives = 207/494 (41%), Gaps = 66/494 (13%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENS----NSQMNAYIEVVAQKARAAAEESDK 61 F + + + +S ++ +V++ + I A+ E + R AAE S + Sbjct: 115 FHTIEDIHNAYQSGTLTPTSVVEALLPMIRRDVAKRGPHSTAFTESKVELVRQAAEASTQ 174 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G L+G+P +KD +G H + S +K+ + GAV++ Sbjct: 175 RWKAGKPLGILDGVPFAVKDDLDVRGYKRHVGTGHDYTEGKEVETSWCVKKIEEAGAVLI 234 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNM E ++N +G ++P+ + + GGSSGG ++AV + IG+D Sbjct: 235 GKLNMHELGSDTTNNNPIWGTPLNPYNA-----SYYTGGSSGGVASAVGHGIVPFGIGSD 289 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R P+++ G G+K ++GR S S+ G +T ++ D I + +A D Sbjct: 290 GGGSVRIPSNYCGLFGLKTSHGRVSTAPTPGGMKSVVVRGPLTTSMADLDISYRVLAQPD 349 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAK 298 + P I +GI K + D P + + Q + +++ + G Sbjct: 350 PSCYPSSHFSPPKPHTGPRNKI----IGICKPW-FDRADPAVQEACQSAMQYMQSELGYT 404 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I++I++P Q A+ + AE +L+R +GL + ++ + + T +I F Sbjct: 405 IIDITIPLLQEGQLAHAMTILAEGV-DLSR---PIWGLTPANRILMSVAKQTPTIDF--- 457 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPTSAFPLG 417 L A+++R +I FE+ +I+TPTTP +P+ Sbjct: 458 ---------------------LLAQRVRNVIMEHLAHLFEKHPGLIIVTPTTPNVGWPIE 496 Query: 418 KEENNSG---------SMGHIYNDVFTVAVNMAGLPAISVPAALCEK-----KMPLGLQL 463 + G SM +++ N G+P I +P + K+P+GL Sbjct: 497 DADLACGVSNANMTLRSMEYVW------LANFTGIPCIQLPVGYADAVEGKGKVPIGLSG 550 Query: 464 IGQPFREETLFSVG 477 G E+ L G Sbjct: 551 HGDWGSEDALIEFG 564 >gi|116334945|ref|YP_802440.1| aspartyl/glutamyl-tRNA amidotransferase A subunit [Candidatus Carsonella ruddii PV] gi|116235226|dbj|BAF35074.1| aspartyl/glutamyl-tRNA amidotransferase A subunit [Candidatus Carsonella ruddii PV] Length = 453 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 124/479 (25%), Positives = 222/479 (46%), Gaps = 64/479 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + + + +++K IS E++ I + N + +E + +++ A++ D Sbjct: 1 MNNLFKLGIKKIFFLIKNKKISYFEIIKVCINNLSKLNDKNYFVLETLEKESLKIAKKLD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 N + + L IPI IK+ ++ K S IL + Y S++ + + +++ Sbjct: 61 ----NTNPKIL-SIPISIKNIYSIKNKLLSCNSKILKNYFSTYNSSIIKIIKKYNLIVIS 115 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 ++EF +G S + + +++ S + + PGGSS GS+ +V+ SIG+DT Sbjct: 116 LDKLEEFCIGESGKNN-----CINIKNIYS-NLYLPGGSSSGSAISVSSGCVIGSIGSDT 169 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSIR PA F+ +G KPTYG+ SR G++ ++ SLD IIT D L ++ Sbjct: 170 GGSIRTPAIFSNLIGFKPTYGKISRNGMVPYSSSLDCCSIITNYSSDCKFLYNILST--- 226 Query: 241 CDATCVNLPVPDYERAL---DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 NL + +++ L I+ + + Y DY S K +++ I K Sbjct: 227 -----KNLDLLSFKKYLYVKYNKIKIIALLFDNLYY-DYESK---KKFEKVILNFKILNY 277 Query: 298 KIV--EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG- 354 I+ +I L Y Y I+S E +N RYDG+++G + K+I + + + Sbjct: 278 TIIFKKIDLSVLFY---EYTILSSKEFYTNSCRYDGIKFGYK---KNIFKNINDFTKLNR 331 Query: 355 -FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD--FTEAFEQGVDVILTPTTPT 411 F + K++I++G + YL+ +KI+ K F E F D ++ P+ Sbjct: 332 CFYKTCKNKILLGV--------QNFYLKNQKIKINKKILNFFNELFIIA-DFLIIPSL-- 380 Query: 412 SAFPLGKEENNSGSMGHI----YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 N+ + +I Y D TV N+ G P+I++P + K P G +IG+ Sbjct: 381 ----------NNFKIDNINYSEYCDYITVFSNLIGYPSITIPIGMINHK-PFGFNIIGE 428 >gi|319948026|ref|ZP_08022202.1| 6-aminohexanoate-cyclic-dimer hydrolase [Dietzia cinnamea P4] gi|319438315|gb|EFV93259.1| 6-aminohexanoate-cyclic-dimer hydrolase [Dietzia cinnamea P4] Length = 493 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 136/483 (28%), Positives = 216/483 (44%), Gaps = 53/483 (10%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 +A E+++ I IE + Q+NA +VA + AA E + + +G L G+PI IK Sbjct: 40 TAAEVLEDAIARIEALDPQLNA---MVATRFDAARAEVEAGLPDG---PLRGVPIVIKAL 93 Query: 82 FA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 G+ S + +STV Q+ G V+LG N+ E ++ E+ +GP Sbjct: 94 GTDVAGLPAADGSRLFADVVADVDSTVVQRYKAAGMVVLGTTNVPEMGKTTTTESLLHGP 153 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +PW + ST SSGGS+AAVA + + GTD GGSIR PA+ G VG+KP+ Sbjct: 154 CRNPWDTAHSTGG-----SSGGSAAAVASGMVPVAHGTDGGGSIRIPAAMCGLVGLKPSR 208 Query: 201 GRCSRLG-IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 GR + + L +T TVRDSA LL A+AG+ DA P + + Sbjct: 209 GRVPTWPHPDALSSPLSYHHALTTTVRDSAALLDAVAGHRPGDAYGAPTPPRPFLSEVGA 268 Query: 260 SIQGMTVGI----PKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQYALPA 313 + VG+ P + D + T+D+T + L + G ++ E+ L P + A Sbjct: 269 DPGRLRVGMLRVAPGPFPTDPACTATVDRT----AALLGELGHEVREVELDPDVMEVMSA 324 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM--IGTYVLS 371 I A+ L + R G+E+ + +L Sbjct: 325 VGAIMGAQ----------------------LRATVDARLAALGRELDDDDIEPWTKVILD 362 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFE---QGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + S AR ++T + + A + GVDV++ PT PT+ LG + Sbjct: 363 NAMTHSAPDVARALQTAHRTGWRVAQQFGPDGVDVLMLPTLPTTTPELGYLDVTDPESMW 422 Query: 429 IYNDVFTVAV---NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + F+V N++G PAIS+P ++ +P+G+QL+ RE+ L +G +E A Sbjct: 423 TRSSAFSVCTSMFNLSGQPAISLPLGADDRGLPVGVQLVADYAREDLLLRLGGQLEAAAP 482 Query: 486 YFR 488 + R Sbjct: 483 WQR 485 >gi|312282771|dbj|BAJ34251.1| unnamed protein product [Thellungiella halophila] Length = 663 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 141/276 (51%), Gaps = 12/276 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + ++++ I++ ELV Y++ ++ N + A + + A A+E+D Sbjct: 203 DIAFMSVLELGELIKTRQITSEELVRIYLKQLKRYNQVLEAVVTYTEELAYKQAKEADDL 262 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S E+ V ++L +GAV++ K Sbjct: 263 LSKGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQVLDIEAWVYKRLKASGAVLVAK 322 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 323 LVSGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 374 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+ PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D Sbjct: 375 GSMTYPAARCGVTALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVVLDAIKGKDPE 434 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL 277 D + L +E I +TVG K+ ++ + Sbjct: 435 DLSSREL---AFEDPFSVDITKLTVGYTKDADMEVV 467 >gi|304398925|ref|ZP_07380795.1| Amidase [Pantoea sp. aB] gi|304353629|gb|EFM18006.1| Amidase [Pantoea sp. aB] Length = 478 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 114/480 (23%), Positives = 197/480 (41%), Gaps = 44/480 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +R+ ++SA EL + + +E + A+ + A A A+ D R G+ L G+ Sbjct: 17 IRNGEVSACELTAAALARMEQREPTVQAFCTPTPELAMAQAKAIDDRRARGETLGALAGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ +KD T + T + S F P + ++L A++LGK EF Sbjct: 77 PLAVKDLICTANVRTTSGSAAYKEFVPEDDDITVERLLAADAILLGKTTAPEFGYSGVGH 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +PW TPGGSS GS AAVA LC ++G+D GGS+R PA+ G Sbjct: 137 NPLFPSPRNPWNL-----AMTPGGSSAGSGAAVAARLCPIALGSDGGGSVRIPAAHCGIF 191 Query: 195 GIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 G K + GR R +S SL+ G +TR+VRD+A+++ +AG D D + Sbjct: 192 GFKASMGRVPLWPGCRDERYPGVSSWESLEHIGPMTRSVRDAALMMSLMAGPDMRDRHSI 251 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI-SWLKDAGAKIVEISLP 305 D+ A + + + ++ + P + + + + GA++ E++ P Sbjct: 252 PCSDVDWLGAPEHLPGKLRIAFSADFGYVAVDPEVRAVVSAAVRRFAAEIGAEL-ELADP 310 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A+ + E+ R G + + + + R+ F + R + Sbjct: 311 GFPDPSAAFGALVAMESDLTGMRQMMAEQGSTMSPHLVAMLQRDWRAENFTDAIATRKAV 370 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---GKEENN 422 + F Q D+++TPT FPL G E + Sbjct: 371 SNSLWR-------------------------FMQRFDLLITPTLAVPPFPLRMQGPEIID 405 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 S + + + F N G PA SVPA +P+G+Q++G+ + + + E+ Sbjct: 406 SRMVRNDHWLSFCFPFNFTGQPAASVPAGFTASGLPVGMQIVGRHLDDALVLAASAAFER 465 >gi|163850793|ref|YP_001638836.1| amidase [Methylobacterium extorquens PA1] gi|163662398|gb|ABY29765.1| Amidase [Methylobacterium extorquens PA1] Length = 527 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 203/492 (41%), Gaps = 60/492 (12%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 IE N + A I + Q A +R + L G+P+ IKD G+ + Sbjct: 53 IETYNPRYKALIVMNPQALDDARAIDARRAAGEELGPLAGVPVVIKDTMDMAGLPSTGGW 112 Query: 94 HILDG------FRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWR 146 H L P ++ VT ++ + G V+LGK N+ + GS S+ GP ++P Sbjct: 113 HFLSAEAGGVDLIPATDAPVTARMREAGCVILGKTNVPVLSHTGSHANDSWAGPTLNP-- 170 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 + D+ PGGSS G++ AVA L + +TGGSI+ PAS G VGIKP++G Sbjct: 171 --AAPDRI-PGGSSAGTATAVAASLAVLGLAEETGGSIQNPASAQGLVGIKPSFGLVPNA 227 Query: 207 GIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPVPDYERALDQ-S 260 G++ A S D G I R VRD+A+ L A+AGY D V P Y LD + Sbjct: 228 GVMPLAGSTRDVVGPIARCVRDAALTLDALAGYSSADPKTVAGIGKRPEAGYAAGLDAGA 287 Query: 261 IQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 + G +G+ ++R LS + + L+ AGA +V T +A + Sbjct: 288 LVGKRLGLYGPDWRDLPLSEEASALYARTQKELEAAGATLVADPFAGTGFA-------AI 340 Query: 320 AEASSNLARYDG--------------VRYGLRVEGKDILEMYENTRS-IGFGQEVKHRIM 364 AE + L +D R G V + E T++ F + Sbjct: 341 AEPTPGLVYFDARGFESAPYDLQLYLERMGPDVAIRSFAAFAEATKAEDAFAPGGVLHPI 400 Query: 365 IGTYVLSSRCYD-------SHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 L+ D S +L AR+ L R E G+D ++ P PL Sbjct: 401 TNLPGLAPCLADPASPPDLSDFLAAREAYLALFDRVMA---EHGLDALVFPQMRAELPPL 457 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + G++ + +N+AGLP +++PA P L +G+ + E L + Sbjct: 458 ----HGPGTL----LETTVCEINIAGLPGVTLPAGAYASGSPFNLIFVGRMWSEGDLLAY 509 Query: 477 GQIIEKEAGYFR 488 E+ + R Sbjct: 510 AYAYEQATHHRR 521 >gi|192290293|ref|YP_001990898.1| amidase [Rhodopseudomonas palustris TIE-1] gi|192284042|gb|ACF00423.1| Amidase [Rhodopseudomonas palustris TIE-1] Length = 490 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 143/514 (27%), Positives = 218/514 (42%), Gaps = 55/514 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S +F V++ L++K +SAVEL I IE + ++NA +A +A +D Sbjct: 4 SPWSFATVTDLSAALKAKQVSAVELTQDAIGRIERHDDKVNAVCVRDFDRALQSARAADL 63 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP+ +K+ F G+ T F ++ +++ G V+LGK Sbjct: 64 ALSRGGREPLLGIPMTVKESFNVAGLPTTWGFVEQKNFVAAADALAVERVKAAGGVILGK 123 Query: 122 LNMDEFAMG---SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 N+ A+G S NE YG +P+ TPGGSSGGSSAA+A A S+G+ Sbjct: 124 TNV-PVALGDWQSYNEI--YGTTGNPYDL-----GRTPGGSSGGSSAALAAGFGALSLGS 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-------SLDQAGIITRTVRDSAIL 231 D GGS+R PA + G KPT+G C G L G + R+ D A+L Sbjct: 176 DIGGSLRVPAHYCGVYAHKPTFGLCPARGHTPPPFPPLPSNRDLSVIGPMARSAADLALL 235 Query: 232 LKAIAGYDEC-DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 L IAG D D L +P A +++ V + + L + Q Sbjct: 236 LDVIAGTDPIFDGIAYQLDLP---AARHTALKDFRVLLLDTHPLLPTGAAVHSALQTLAD 292 Query: 291 WLKDAGAKIVEIS--LPHTQYALPAY--YIISPAEASSNLARYDGVR-YGLRVEGKDILE 345 L AGA + S LP Y ++S A Y G + + D Sbjct: 293 GLTKAGASVTRSSPLLPDLAETSRVYMRMLLSFLAAGFPADLYAGAQAMAAGLSATDDSL 352 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 E R I VLS R ++ A RT ++ + E F+ D ++ Sbjct: 353 AAERLRGI---------------VLSHR----DWVAADSRRTGLRAQWRELFKS-FDAVI 392 Query: 406 TPTTPTSAFPLGKEENNS------GSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKM 457 P PT A+P E H Y D V+ + GLP+ ++P A+ + + Sbjct: 393 CPVMPTPAYPHDHHEPQEERRILIDGKPHPYVDQLVWPGIATLPGLPSTALPIAMSDDGL 452 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G+Q++G + T + ++IE+E G F+P K Sbjct: 453 PIGVQIVGPWLEDRTPLKLAELIEREFGGFKPPK 486 >gi|255636554|gb|ACU18615.1| unknown [Glycine max] Length = 490 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 154/301 (51%), Gaps = 23/301 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRIINGDARDL 71 R+K +++ E+VD Y++ IE N + +E+ ++Q +A E K G L Sbjct: 23 FRTKQLTSREVVDFYLKQIETQNPVLKGVLELNPDALSQADKADHERKTKA--PGSLSPL 80 Query: 72 EGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 GIPI IKD ATK ++T A S L G ++ V +L + GA++LGK +M E+A Sbjct: 81 HGIPILIKDNIATKDKMNTTAGSSALLGSVVPRDAGVVSRLREAGAIILGKASMSEWAFY 140 Query: 131 SSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 SN ++ G +P+ +MD SS GS+ +VA L A S+GT+T GSI Sbjct: 141 RSNAAPSGWSARGGQGKNPY-TMDGPSG-----SSSGSAISVAANLVAVSLGTETDGSIL 194 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++ VGIKPT G SR G++ P D G I RTV D+A++L+ IAG D D Sbjct: 195 SPSNVNSVVGIKPTVGLTSRAGVVPITPRQDTVGPICRTVSDAALVLETIAGIDINDQAT 254 Query: 246 VN----LPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 + +P Y + L + ++G +G+ + + + KT + L+ GA +V Sbjct: 255 IEASKYVPEGGYAQFLKKEGLRGKRLGVVRFFYGFSGDTVMHKTLELHFKTLRQKGAVLV 314 Query: 301 E 301 + Sbjct: 315 D 315 >gi|116317818|emb|CAH65854.1| OSIGBa0140C02.6 [Oryza sativa Indica Group] gi|116317850|emb|CAH65882.1| OSIGBa0148J22.1 [Oryza sativa Indica Group] Length = 511 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 151/321 (47%), Gaps = 30/321 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E N V + + +++ LV Y+ I N ++A IEV AA +R Sbjct: 22 EFNEATVDAIQLGFSNGSLTSTTLVRFYLDHIARLNPLLHAVIEVNPDALAQAARADAER 81 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+P+ +KD AT+ ++T A S L G ++ V +L GAV+LGK Sbjct: 82 ATGRRCGPMHGVPVLLKDNMATRDRLNTTAGSLALLGSVVRRDAGVAARLRAAGAVILGK 141 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRS------------MDSTDKFT--PGGSSGGSSAAV 167 ++ E+ S + PV S W + M++ + P GSS G + A Sbjct: 142 ASLSEW--------SNFRPVKSGWSARGGQTVVFVKLPMENPYVLSADPCGSSSGPAVAA 193 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A + A ++GT+T GSI PAS VGIKPT G SR G+I +P D G I RTV D Sbjct: 194 AANMAAVTLGTETDGSILCPASLNSVVGIKPTVGLTSRAGVIPISPRQDTVGPICRTVSD 253 Query: 228 SAILLKAIAGYDECDATCVN-----LPVPDYERALDQ-SIQGMTVGIPKEYRLD-YLSPT 280 +A +L I G+DE DA +P Y R L ++G +GIP + + T Sbjct: 254 AAHVLDVIVGFDELDAEATGAASKYIPSGGYGRFLRMDGLKGKRIGIPNGFFTEGAYGKT 313 Query: 281 IDKTWQQGISWLKDAGAKIVE 301 + +Q+ +S ++ GA ++E Sbjct: 314 QLRVYQKHLSTMRKHGALVIE 334 >gi|121999140|ref|YP_001003927.1| allophanate hydrolase [Halorhodospira halophila SL1] gi|121590545|gb|ABM63125.1| Amidase [Halorhodospira halophila SL1] Length = 596 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 114/423 (26%), Positives = 182/423 (43%), Gaps = 58/423 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P IKD G+ T A C + P + V Q+L D GAV +GK N+D+FA Sbjct: 65 LYGVPFAIKDNIDLAGVPTTAGCPDY--AYTPETSAFVVQRLIDAGAVPVGKTNLDQFAT 122 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG + + + GGSS GS+ A A ++GTDT GS R PA+ Sbjct: 123 GLVGTRSPYGACPNAFHR-----DYIAGGSSSGSALATALGQVPFALGTDTAGSGRVPAA 177 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F +G+KPT GR S G++ SLD I T D+ +L A YD D Sbjct: 178 FNNLIGLKPTCGRLSTRGVVPACRSLDTVSIFAGTASDAGHILAAAGAYDATD------- 230 Query: 250 VPDYERALDQSI-------QGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVE 301 P RA ++ G +P + + + +++ ++ L+ G VE Sbjct: 231 -PYARRAQPPALGPGRIPAHGFRFAVPPSEQCAFFGNEATPGLFERAVARLQALGGVAVE 289 Query: 302 ISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 P + A Y E RY +R + + + +L + TR I Sbjct: 290 RDFSPFLEAARLLY------EGPWVAERYAAIRDFIDRQPESLLPV---TRQI------- 333 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLG 417 I G+ L++ +++ Y R + +R + + E VD+ +TPT P+ A Sbjct: 334 --IGAGSQPLAADAFEAAY-RLQALRRQAETTWEE-----VDLAITPTAGTLPSQAAVAA 385 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV- 476 + + +G+ +T +N+ A++VPA + +P G+ L F + L S+ Sbjct: 386 EPVARNSELGY-----YTNFMNLLDCSAVAVPAGFQDNGLPFGVTLFAPAFYDTDLLSLA 440 Query: 477 GQI 479 GQ+ Sbjct: 441 GQL 443 >gi|10129791|emb|CAC08204.1| amidase [Rhodococcus sp. AJ270] Length = 324 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 21/314 (6%) Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG KPT+G G ++D G ITRTV D+A++L IAG D D Sbjct: 2 PAAFCGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDGNDPRQA 61 Query: 247 N-LPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL 304 + + DY LD + G+ +GI +E +S P +D + L + G + E+++ Sbjct: 62 DSVEAGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNI 121 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFGQE 358 P +A + +I+ + + DG YG+ EG +++ + + R + + Sbjct: 122 PWHLHAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRIQHADALSET 179 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 VK + G + +++ S Y +AR + L + + A Q DV++ PT P A L Sbjct: 180 VKLVALTGHHGITTLGGAS-YGKARNLVPLARAAYDTALRQ-FDVLVMPTLPYVASELPA 237 Query: 419 EENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 ++ + + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + T+ Sbjct: 238 KDVDRATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGRHFDDATV 293 Query: 474 FSVGQIIEKEAGYF 487 VG+ EK G F Sbjct: 294 LRVGRAFEKLRGAF 307 >gi|170751692|ref|YP_001757952.1| amidase [Methylobacterium radiotolerans JCM 2831] gi|170658214|gb|ACB27269.1| Amidase [Methylobacterium radiotolerans JCM 2831] Length = 481 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 121/496 (24%), Positives = 201/496 (40%), Gaps = 65/496 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGD-ARDLEG 73 +R + +S VE++ +Y++ I N Q+NA + + AE +D + G+ L G Sbjct: 21 IRGRVVSCVEVMRAYLERIHRINPQVNALVGLADDAALLREAEAADAVLARGEPVGPLHG 80 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ +KD +G+ S I +S + +L GA+ +GK N+ EF +GS + Sbjct: 81 FPLAVKDLDPVRGLRFTQGSPIFADRVAETDSIMVTRLRAAGAIFIGKTNIPEFGLGSHS 140 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF----LCAASIGTDTGGSIRQPAS 189 YG + + + P + GGSS A + + G+D GS+R P + Sbjct: 141 FNPVYG---------ATGNAYDPAMTGGGSSGGAAVAVALRMQPVADGSDHAGSLRNPPA 191 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G++P++GR F+P+L G I RT D ++L +AGYD V Sbjct: 192 FNNCYGLRPSWGRIPAEAKDVFSPNLGVLGAIGRTPGDIGLMLSVLAGYDPRCPNAVRQD 251 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI-VEISLPHTQ 308 + R L + +G I+WL D G +I + + Sbjct: 252 PSAFARPLARDFRGTR-----------------------IAWLGDCGGEIPFDPGVLDVG 288 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI--- 365 A A + + RYD R L + N R + E +HR ++ Sbjct: 289 RAALATFAEIGCTVEEAMPRYDMERLWQDWLVLRALTVAANLRPL--YDEPRHRALLKPE 346 Query: 366 -------GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 G + + R + R R TL R F EA+ D ++ P+ FP K Sbjct: 347 AVWEVERGLALGADRIIAALEGRTRWYETL--RRFMEAY----DYVVMPS--AQVFPFDK 398 Query: 419 EENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 ++G D + T+ M+GLPA++VPA E +P G+Q++G E Sbjct: 399 SLRWPETVGGHAMDTYHRWMQITIPATMSGLPALAVPAGFGEAGLPAGIQIVGPNHGELA 458 Query: 473 LFSVGQIIEKEAGYFR 488 +G + + + R Sbjct: 459 CLQLGAAYDAASNWVR 474 >gi|89100061|ref|ZP_01172931.1| 6-aminohexanoate-cyclic-dimer hydrolase [Bacillus sp. NRRL B-14911] gi|89085295|gb|EAR64426.1| 6-aminohexanoate-cyclic-dimer hydrolase [Bacillus sp. NRRL B-14911] Length = 538 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 136/516 (26%), Positives = 220/516 (42%), Gaps = 81/516 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ K+ + +EL ++ I+ IE N +NA I + +A+ AA +D + G G+P Sbjct: 63 VKKKEAAPIELAEAAIENIEALNPGLNAVINKMYDQAKKAALSAD---LEGS---FAGVP 116 Query: 76 IGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD G + S L +R +S +L GA+ +G+ N+ E A+ E Sbjct: 117 MLLKDITQEIAGERITSGSKALQNYRAKSDSEFVARLRRTGAIFIGQTNVPELALMGITE 176 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++GP +PW +TPGGSSGGS+AAVA + + D GGSIR PA++ G Sbjct: 177 PEFHGPARNPWNP-----DYTPGGSSGGSAAAVASGMVPIAGANDGGGSIRIPAAYCGLF 231 Query: 195 GIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KP GR + GI ++TR+VRDSA +L + G ++ A P Y Sbjct: 232 GLKPGRGRTPAGPGIGRHWQGASSDHVLTRSVRDSAAMLDELHGPEKGGAFYAIPPSESY 291 Query: 254 ERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDAGAKIVEISL 304 L++ +PK ++ Y + P + + + L+D G + E Sbjct: 292 LGCLEKP-------LPKTMKIAYTTASPLGTDVHPDCREAVLRTAAILEDLGYRTEEAEP 344 Query: 305 PHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 L YI + E ++ LA + G +V D+ +T +G + I Sbjct: 345 DIDGKKLAQSYITMYFGEVAAALAGMEAT-LGRKVSRTDV---EASTWLLGM---LGKTI 397 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP-------- 415 G +VLS R +D ++F + D LTP T AFP Sbjct: 398 SAGDFVLSMREWDKAAY------------VMDSFHETYDFYLTPAT---AFPPARIGELS 442 Query: 416 ----------------LGKEENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCE 454 LGK +G G + + FT N+ G PA+SVP Sbjct: 443 LKNAEKTAVRLISMLKLGKLAQKAGLAGQLAENSLKRTPFTQLANLTGQPAMSVPLHSTA 502 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 + +P G+Q + RE+ LF + +E+ + R + Sbjct: 503 EGLPCGVQFMAAKGREDLLFRLAFELEQTPHWLRKY 538 >gi|325676110|ref|ZP_08155792.1| amidase [Rhodococcus equi ATCC 33707] gi|325553150|gb|EGD22830.1| amidase [Rhodococcus equi ATCC 33707] Length = 448 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 112/398 (28%), Positives = 177/398 (44%), Gaps = 44/398 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAM 129 L GI + +KD G+ T+ S IL P + +L + GA+++ K ++ EFA Sbjct: 71 LHGIAVAVKDNIDVAGMPTRCGSAILADAPPAANDARIVARLREAGAIVVAKTHLHEFAY 130 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + + GP P PGGSS GS+A VA + +IGTDTG S R PAS Sbjct: 131 GPTGAINASGPAAHP-----HDPNLVPGGSSSGSAALVAKGVVPVAIGTDTGCSTRTPAS 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+KP++ G + + D G++ V D ++ A+ G V P Sbjct: 186 LCGIVGMKPSFDALPTSGAFPLSTTFDHIGLLAADVLDVSLAWGALPGIAH-----VRTP 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 V G+ VG + D P I L D GA+++++ LP T+ Sbjct: 241 V-----------AGLRVGRLRGANWDVADPAIAAAVDAACRALVDTGAEVLDVELPETEQ 289 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 L AY II+ +EA Y+ R + E+Y+ + + + R + Y+ Sbjct: 290 FLAAYPIITGSEA------YETHRQWF----EHSPELYQPATAALLAAQ-RDRPAV-EYL 337 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 ++R + +LR + + L + E G+D ++T TTP A + + ++ Sbjct: 338 HAARTVE--HLRRQALSRL-------SGELGLDALVTATTPLRAVSQEQALSADPAVART 388 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 + N G+PAISVPA E P+G+Q+IG P Sbjct: 389 PLLRMCIPFNALGIPAISVPAPGVEGD-PIGIQVIGLP 425 >gi|294876564|ref|XP_002767709.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239869517|gb|EER00427.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 588 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 126/494 (25%), Positives = 224/494 (45%), Gaps = 60/494 (12%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQ-KARAAAEESDKRIINGDARD-LEGIPIGIK 79 + +++ + A+ N + A +++ + + A A+ SDKR G L+G+P IK Sbjct: 126 TPTQVITRVLSAVAELNPTIKAIQDLLPESEIMAMAKASDKRYAEGKPLSMLDGVPFTIK 185 Query: 80 DCFATKGI---HTQACSHILDGFRPHYEST--VTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 D KG+ + ++ L G E V Q L D GA++LG M E+ + Sbjct: 186 DEVHVKGLPNMYGTNPNNRLPGAAKVEEDNDPVVQALLDAGAILLGTNTMHEYGVSPLGY 245 Query: 135 TSYY-GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ++Y GP+ + +T FT GGSS GS+ AVA L +IG D GGSIR P+S++G Sbjct: 246 NTWYQGPL-----NAFNTSYFT-GGSSSGSATAVAAGLVPFAIGFDGGGSIRIPSSWSGV 299 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPD 252 VG+ PT+GR + + ++ G I TV D+A +L+ I E L PD Sbjct: 300 VGLAPTFGRVNFEIPSTSVFTVLHCGPIAATVADAAHVLRVIGNTKHEVPHIYDRLYGPD 359 Query: 253 YERALD-------QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 A+ ++ TVGI +++ + + P + +++ ++ L I ++P Sbjct: 360 GRPAVHLHALTSPETNHKPTVGIFQDW-VRHSDPEVYNAFEKSLTALD---WNIYNFTMP 415 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR-SIGFGQEVKHRIM 364 + ++ + AE +G ++ +DI + T+ G G+++ Sbjct: 416 NMGAQSLSHMLTITAE------------FGKELDYEDISRLEPGTKIEFGLGRDI----- 458 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 T V L +++ + FE+ VD I+TPT P ++ P+ ++ G Sbjct: 459 --TAV--------ERLTMERLKGWSMEQWNAVFEK-VDAIVTPTLPITSIPIPEDTRAHG 507 Query: 425 -SMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S ++ + + N G PAI+VP K MP+GL ++ ++++ ++ + +E Sbjct: 508 MSNTTLFVQMMRYVWPTNFLGFPAITVPVDYDSKGMPIGLLVMCPQWKDDKCLALAEQVE 567 Query: 482 KEAG--YFRPHKWW 493 K RP K W Sbjct: 568 KIVANERRRPSKNW 581 >gi|325274593|ref|ZP_08140649.1| amidase [Pseudomonas sp. TJI-51] gi|324100235|gb|EGB98025.1| amidase [Pseudomonas sp. TJI-51] Length = 487 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 124/520 (23%), Positives = 221/520 (42%), Gaps = 78/520 (15%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEES 59 +SEL + E +R+R + +S E++ +Y+ IE N +NA I + + ++ A A+ Sbjct: 6 ISELVLLQAHELAERIRLRQVSCREVMQTYLAHIERFNPLVNALISLQSPESLLAQADAR 65 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D + G R + G+P IKD T+GI T S + + P + + +++ GA++ Sbjct: 66 DAELARGAYRGWMHGLPHAIKDLSLTQGIRTTFGSPLFKDYLPERDGIMVERIKAAGAII 125 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N EF +GS + +GP + D + T GGSSGG++AA+A L + G+ Sbjct: 126 IGKTNTPEFGLGSQSYNPLFGPTAC---AYDLSK--TAGGSSGGAAAALAMHLVPVADGS 180 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAG 237 D GS+R PA+F G +P+ GR F L G + R+V+D+A+LL AG Sbjct: 181 DMMGSLRNPAAFNNIFGFRPSQGRVPFDDSADLFFDQLGYEGPMARSVKDAALLLSVQAG 240 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D ++ + L++ +G +G WL D Sbjct: 241 GDARAPLSISESGTVFAMPLEREFKGTRIG-----------------------WLGDFNG 277 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 SLP + L A ++G+ G +E + + + G + Sbjct: 278 -----SLPMERGILEL--------CEKTFADFEGL--GCHIEA--VQPDFAPQKLWGSWR 320 Query: 358 EVKHRIMIGTY------------VLSSRCYD---------SHYLRARKIRTLIKRDFTEA 396 ++H ++ G+ + C++ S A R+ R + Sbjct: 321 TLRHWMVAGSLGAAYADPQKRAQLKPEACWEVENGLKLSASEVFAASVARSDWYRSISRL 380 Query: 397 FEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPA 450 FEQ D +L P+ FP K ++ I D + + ++G P +V A Sbjct: 381 FEQ-YDYLLLPS--AQVFPFDKTLPWPTAINDITMDTYHRWMEVVIPGTLSGCPVANVQA 437 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 E +P+GLQ+IG+ + ++ + E+ + +++ H Sbjct: 438 GFSESGLPMGLQIIGRYQADLSVLQLAHAYERASDWYKRH 477 >gi|269961321|ref|ZP_06175686.1| hypothetical protein VME_20700 [Vibrio harveyi 1DA3] gi|269833872|gb|EEZ87966.1| hypothetical protein VME_20700 [Vibrio harveyi 1DA3] Length = 600 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 130/482 (26%), Positives = 221/482 (45%), Gaps = 57/482 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD---KRI 63 + +S+ + RS+++ + +Q + + N++I V++ E+ D + Sbjct: 15 LTISDLLEAYRSEELDVKAFLTEKLQQVRED--EFNSWISVISD------EQLDVFLNYL 66 Query: 64 INGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + DL G+P IKD G+ T A ++P + V + L GAV LGK Sbjct: 67 TEKGSHDLPLFGVPFAIKDNIDLAGLETTAGCEAYR-YQPSESAFVVELLIKAGAVPLGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 NMD+FA G S +G V + S D + + GGSS GS+ +VA S+GTDT Sbjct: 126 ANMDQFATGLVGTRSPWGAVKN---SFDPS--YISGGSSSGSAVSVATNQVYFSLGTDTA 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE- 240 GS R PA+F G+KP+ G S G++ +LD ++ D L + A YDE Sbjct: 181 GSGRVPAAFNNLYGLKPSKGLLSCSGVVPACRTLDCVTFFAKSAEDLGALYQVAAKYDEK 240 Query: 241 -CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAK 298 C + C P D + + G+ VG+P E +L + + K + Q ++ L+ GA+ Sbjct: 241 DCFSRCSIGPSFDDPK----TFAGVRVGVPNEAQLKFFGNDEYRKLYAQAVARLEALGAE 296 Query: 299 IVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++ L P Q A Y+ AE RY ++ E +E+ Sbjct: 297 VIPFDLEPFIQAADLLYHGPWVAE------RYAAIQ-----------EFFESNEENCL-- 337 Query: 358 EVKHRIMIGTYVLS-SRCYDSHY-LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +V +I+ G LS + + + Y L+ K++ + +DV+LTPTT T + Sbjct: 338 DVIQKIVGGAKTLSAAETFKAIYQLQEYKVQ-------CDQLMDDIDVVLTPTTGT-IYK 389 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + +E NN + +T +N+ AI++PA ++ +P G+ L Q +++ETL + Sbjct: 390 I-EEVNNDPIALNTNLGYYTNFMNLLDYSAIAIPAGFTDEGLPFGVTLFAQAYQDETLIN 448 Query: 476 VG 477 + Sbjct: 449 LA 450 >gi|225872219|ref|YP_002753674.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium capsulatum ATCC 51196] gi|225793899|gb|ACO33989.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidobacterium capsulatum ATCC 51196] Length = 577 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 120/489 (24%), Positives = 219/489 (44%), Gaps = 39/489 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + AV + +R++ +++ L + Y++ + + ++ I + ++ AR A ++D Sbjct: 119 DIAYAAVWQLAHWVRTRQLTSTRLTEIYLERLHRYDGELRCVITLTSELARKQARQADAE 178 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G R L GIP G KD T I T + + P + V ++L GAV++ K Sbjct: 179 IAAGHYRGPLHGIPWGAKDLLDTADIRTTWGAKPFEHRVPKKNAVVVERLEKAGAVLVAK 238 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L++ A+ N+ + G ++PW + + SS G AAVA L A +IG++T Sbjct: 239 LSLGALAL---NDVWFGGQTMNPWLPEEGSSG-----SSAGPGAAVAAGLVAFAIGSETE 290 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+ G G++PT+GR +R G ++ SLD+ G + RTV D+ ++L I+G D Sbjct: 291 GSIVSPSMRCGVTGLRPTFGRVARTGAMTLCWSLDKLGPMARTVEDTMLVLHTISGPDAG 350 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D +LP + A + +G+ VG + + + +D+ ++ L + +E Sbjct: 351 DLD--SLPSHLHYDARVPA-KGIRVGYIPAWMQEAPATEVDR---NVLAMLPELDMTPLE 404 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT-RSIGFGQEVK 360 + LP Y + + A AS DG +R++ D + N R F V Sbjct: 405 VHLPDWPYGSLNTILFAEAAASFEKITLDGQVDEMRMQTPD---SWPNLFRQARFLSAVD 461 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 Y++ ++R L+ F VDV+L P+ L Sbjct: 462 ------------------YVQTDRLRRLVAEQMVRVFAD-VDVLLVPSLRDEILTLTNFT 502 Query: 421 NN-SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + S ++ + +V + A P +P +++P G+ IG+ F E T+ G Sbjct: 503 GHPSLTLRTGFVEVSEARSDWAPDPKHPLPRFNPPRRVPHGVTFIGKLFDEGTVARAGLA 562 Query: 480 IEKEAGYFR 488 +E + ++ Sbjct: 563 VEHKLNVWQ 571 >gi|161078093|ref|NP_001097707.1| CG7900 [Drosophila melanogaster] gi|158030187|gb|AAF54190.3| CG7900 [Drosophila melanogaster] Length = 536 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 139/526 (26%), Positives = 227/526 (43%), Gaps = 77/526 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++V E R RL+S+ +++VELV +YI+ IE N +NA IE A A E+D Sbjct: 42 SRLLTLSVQELRRRLQSRQLTSVELVRTYIERIEAVNKHLNALIESRFTAALEEATETDD 101 Query: 62 RIING----------DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 I + + R L G+P+ IK+ A +G+ S + + ++L Sbjct: 102 LIASCQTAAEVEKLFEERPLLGLPVTIKESCALEGMTFAVGSLSRKNIKAEADGEAVKRL 161 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS-GGSSAAVAGF 170 GA+ L E+ +T G ++P+ S ++ + G S G+ A++ G Sbjct: 162 KLAGAIPLLVSATPEYCFSIETDTLLNGRCLNPYDSERTSGGSSGGEGSLNGAGASLFG- 220 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-------AGIITR 223 IG+D GGSIR P+ + G G KP+ G S G F SLD G ITR Sbjct: 221 -----IGSDIGGSIRIPSLYCGIFGHKPSGGVVSVKG--HFPNSLDPNIGHYLVEGPITR 273 Query: 224 TVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY------L 277 D + LL+ +AG + +N PV L+Q I +Y L + + Sbjct: 274 FAEDLSELLQVMAGKENSSKLRLNEPV-----QLNQ--------IKVQYALAFEGINGWM 320 Query: 278 SPTIDKTWQQGI----SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 +DK I + LK G + ++ LP+ + ++ A S +A D + Sbjct: 321 HMAVDKDITGAICKATTHLKTLGLNVKKVKLPNLENSVEM--------ALSGIAGQDLMD 372 Query: 334 YGLRVE-----GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 Y L E GK ++E +S+ + +I + L R ++ KI Sbjct: 373 YLLTDENPEGSGKVRETVWEIVKSVRGHSKYTTNALI--FELMRRT--GAFMSQSKINQY 428 Query: 389 IK--RDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGL 443 +K R+ FE + V+L PT A + S+ ++ +T+ N+ GL Sbjct: 429 MKETRELIGEFENLLGDNGVLLFPTLNLPA------PRHKWSILSLWGVDYTLMFNVLGL 482 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 P VP L E+ +P+GL +IG P ++ V +E+ G ++P Sbjct: 483 PVTHVPMGLNERGLPIGLSVIGAPNQDRLCLRVAVELERAFGGWKP 528 >gi|169603572|ref|XP_001795207.1| hypothetical protein SNOG_04795 [Phaeosphaeria nodorum SN15] gi|111066066|gb|EAT87186.1| hypothetical protein SNOG_04795 [Phaeosphaeria nodorum SN15] Length = 558 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 154/328 (46%), Gaps = 35/328 (10%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D L+ ++ +LV +Y+ I N +A +EV A ++R G R L G Sbjct: 57 DGLKYGLFTSEQLVKAYLARITEVNHIFHATVEVNPDATVIARCLDNERHQRGYRRKLHG 116 Query: 74 IPIGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF----- 127 IPI +KD T C S L G RP E+ + L + GA++LGK NM E+ Sbjct: 117 IPIFVKDNIPTLDAMDTTCGSMALVGARPAKEADIVTTLRNAGAIILGKGNMAEWSGFRS 176 Query: 128 --------AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 A G + +YY + GSS G + AV+ LCAA++GT+ Sbjct: 177 TSGCSGWSARGGQTKGAYY-------------PEMKASGSSSGCAVAVSMGLCAAAVGTE 223 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA-ILLKAIAGY 238 T SI PA G +G KPT S G+I + LD G++TRTV D+A ILL+ I+ Sbjct: 224 TCYSIVSPAEKAGIIGFKPTRNLLSSDGLIHASQRLDTVGLLTRTVSDAADILLELISHS 283 Query: 239 DECDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYR-LDYLSPTIDKTWQQGISWLKDAG 296 + D + + + D + + S+ M +GIP + L LS + ++ + L+ AG Sbjct: 284 NHHDVSAKDKLIKDITCSFSKTSLSTMRIGIPWSLQGLTILSLPKREAFRHVLIALQRAG 343 Query: 297 AKIV-EISLPHTQYALPAYYIISPAEAS 323 A +V ++ +P + ++PA+ S Sbjct: 344 ATLVHDVHMP----GAAEFEALTPAQKS 367 >gi|297602182|ref|NP_001052187.2| Os04g0183500 [Oryza sativa Japonica Group] gi|38346902|emb|CAE04397.2| OSJNBb0006L01.9 [Oryza sativa Japonica Group] gi|255675187|dbj|BAF14101.2| Os04g0183500 [Oryza sativa Japonica Group] Length = 511 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 151/321 (47%), Gaps = 30/321 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E N V + + +++ LV Y+ I N ++A IEV AA +R Sbjct: 22 EFNEATVDAIQLGFSNGSLTSTTLVRFYLDRIARLNPLLHAVIEVNPDALAQAARADAER 81 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+P+ +KD AT+ ++T A S L G ++ V +L GAV+LGK Sbjct: 82 ATGRRCGPMHGVPVLLKDNMATRDRLNTTAGSLALLGSIVRRDAGVAARLRAAGAVILGK 141 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRS------------MDSTDKFT--PGGSSGGSSAAV 167 ++ E+ S + PV S W + M++ + P GSS G + A Sbjct: 142 ASLSEW--------SNFRPVKSGWSARGGQTVVFVKLPMENPYVLSADPCGSSSGPAVAA 193 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A + A ++GT+T GSI PAS VGIKPT G SR G+I +P D G I RTV D Sbjct: 194 AANMAAVTLGTETDGSILCPASLNSVVGIKPTVGLTSRAGVIPISPRQDTVGPICRTVSD 253 Query: 228 SAILLKAIAGYDECDATCVN-----LPVPDYERALDQ-SIQGMTVGIPKEYRLD-YLSPT 280 +A +L I G+DE DA +P Y R L ++G +GIP + + T Sbjct: 254 AAHVLDVIVGFDELDAEATGAASKYIPSGGYGRFLRMDGLKGKRIGIPNGFFTEGAYGKT 313 Query: 281 IDKTWQQGISWLKDAGAKIVE 301 + +Q+ +S ++ GA ++E Sbjct: 314 QLRVYQKHLSTMRKHGALVIE 334 >gi|254560151|ref|YP_003067246.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium extorquens DM4] gi|254267429|emb|CAX23268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium extorquens DM4] Length = 616 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 114/419 (27%), Positives = 178/419 (42%), Gaps = 37/419 (8%) Query: 69 RDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L G+P +KD G+ T A C F P + +L GA+++GK N+D+F Sbjct: 64 KPLWGVPFAVKDNLDVVGLPTTAACPDF--AFVPSETAPCVARLLAAGAILIGKTNLDQF 121 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + P +P ++++ PGGSS GS+ AVA L A ++GTDT GS R P Sbjct: 122 ATGLVGLRT---PHPAPRNALNA--DLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVP 176 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KP+ G S G++ +LD + TV D+ + + +AGYD D + Sbjct: 177 AGLNNVVGLKPSLGSVSSRGLLPACRTLDTVSVFAGTVADADRVFRIMAGYDAADPYSRD 236 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPH 306 LPV L G+ VG+P L + P + + G+ L + + L Sbjct: 237 LPVTTQPPGLP---PGLRVGMPDAASLRFGGDPLSEAAFVAGLDDLATLTGRPDAVDL-A 292 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +A+ A P A RY VR + + ++ TR++ + Sbjct: 293 PMFAIAALLYDGPWVAE----RYQAVRPLIE---RSPQALHPTTRAV-----IGRATAFT 340 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + Y LR R TL + +DV++ PT P E + G Sbjct: 341 AADAFAGLYRLAELR-RAADTLWEH---------IDVLVVPTYPRPVTCAELEVDPIGPN 390 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + +T VN+ L A++VP +P GL LI R+ L ++G + AG Sbjct: 391 SEL--GTYTNFVNLLDLCALAVPGRFRTDGLPAGLTLIAPRGRDGLLAALGARLHAAAG 447 >gi|327355627|gb|EGE84484.1| amidase [Ajellomyces dermatitidis ATCC 18188] Length = 554 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 224/501 (44%), Gaps = 71/501 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L S+ S E+V S++ IE N ++NA + + +A A++ DK +A L I Sbjct: 42 LFSRRTSCREVVFSFLARIEEYNPKINAVVSL-NPRALEYADDMDKAFGENNANGSLFCI 100 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD + T + T S L +P ++ + L D GA++LGK+N+ E A+ + Sbjct: 101 PILLKDNYNTVDMKTTGSSRALKDSQPTADAPSVKALRDAGAIILGKVNLHELALEGLSV 160 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S G ++P+ D T GSSGG+ AA+A GTDT S+R PAS Sbjct: 161 SSLGGQTLNPY---DLTRTPG--GSSGGTGAAIAASFAVLGTGTDTVNSLRSPASANSLF 215 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP- 251 I+PT G SR G+I + + D G I R+++D+A L +A GYD D +P Sbjct: 216 SIRPTRGLISRTGVIPVSYTQDVLGPIARSLKDAATALTVMANIGYDPQDNATALVPESV 275 Query: 252 ---DYERAL--DQSIQGMTVGIPKEY----RLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 DY +AL ++G+ +G+ + + R SP ++K IS L+ AGA ++ I Sbjct: 276 LGVDYTKALVAPGRLKGIRLGLIEGFFNRTRDSETSP-VNKVMNDMISKLRAAGATVITI 334 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV--- 359 H I + E S +L D R+ E +++++ Y + ++G + Sbjct: 335 ---HES-------IYNSIEISKDL---DVQRF----EFRELMDAYLQSETLGGSRPSSLA 377 Query: 360 ------------KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + + T ++SS ++ R I+ L T +D I+ P Sbjct: 378 ELYSSGEYLVIPEQHSYVTTALVSSTSNATYAARQYGIQHLKLALQTTFKSHSLDAIIYP 437 Query: 408 TTPTSAFPLG--KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPL 459 G + +G +G + G P +++PA +P+ Sbjct: 438 EQQNLVVKTGSPSQSGRNGILGAV-----------TGFPVVTIPAGFSPASKDAPDGVPI 486 Query: 460 GLQLIGQPFREETLFSVGQII 480 G++++G P+ E+ L S+ I Sbjct: 487 GMEILGLPWTEQKLLSIASSI 507 >gi|242794330|ref|XP_002482348.1| amidase, putative [Talaromyces stipitatus ATCC 10500] gi|218718936|gb|EED18356.1| amidase, putative [Talaromyces stipitatus ATCC 10500] Length = 574 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 124/471 (26%), Positives = 203/471 (43%), Gaps = 62/471 (13%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQ--ACSHIL--DGFRP--HYESTVTQKLWDNGAVMLGK 121 +R L+G I IKD + G+ T + IL DG P +++V ++ + GA++ G Sbjct: 103 SRLLQGRTIAIKDNISIGGLPTTLGTFTEILCRDGKLPISPIDASVVSRILEAGAIIKGS 162 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA---------GFLC 172 N + F + ++ GPV SPW +T + G ++ S+ V G Sbjct: 163 SNCENFCASPLSYSAATGPVHSPWLHGYTTGGSSSGSAALASANIVHRQTQTENKFGLTV 222 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 +IG D GSIR PASFTG G+KPT+G G + AP +D G + + D A+LL Sbjct: 223 DLAIGGDQAGSIRIPASFTGIYGLKPTHGLIPYTGAVGLAPMIDHLGPLAERLEDIALLL 282 Query: 233 KAIAGYDECDA-----TCVNLPVPDYERALDQS-----IQGMTVG-------IPKEYRLD 275 + +AGYD D + + VPDY L Q G +G I + + + Sbjct: 283 QVMAGYDGIDPRMTPESPLRNQVPDYPEQLSQFRSRPLADGEGLGTYFKIGLISESFDIP 342 Query: 276 YLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 L+ + D Q + AGA + E+S+P + + + S S++ G Sbjct: 343 GLTTQVRDTVLQSSKKYFTQAGASVSEVSIPMHREGIVIWTAAS--RPSTSEWACQGKPG 400 Query: 335 G--------LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 G + + +MYE + I+ ++ R +A + Sbjct: 401 GFLTFPPPHIHTQWPPDQKMYEILTAT---NPALINIIFNAPFINQRFGPMTEAKAYRKV 457 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV-------- 438 ++ + AFE+ DV++TP TP+ A P K ++ D VAV Sbjct: 458 FELRAAYDRAFEE-FDVLVTPCTPSVAMPHPKMCADTDGPASSIMDKVNVAVGVTTNTAP 516 Query: 439 -NMAGLPAISVPAAL------CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 N+ G PA+SVP + K+P+G+Q+IG+ + E ++F I E+ Sbjct: 517 FNVTGHPAMSVPCGFGSVSERPDVKLPIGMQVIGKRWDEMSVFKAAAIFEE 567 >gi|260460512|ref|ZP_05808763.1| Amidase [Mesorhizobium opportunistum WSM2075] gi|259033617|gb|EEW34877.1| Amidase [Mesorhizobium opportunistum WSM2075] Length = 481 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 119/228 (52%), Gaps = 14/228 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA----AAEESDKRIINGDARDL 71 +R K +S E+V +++ IE N Q+NA +V+ + R A+ +D R G+ L Sbjct: 28 IRHKKLSVREVVAAFLDRIEAVNPQVNA---IVSLRDRGDILREADAADSRR-QGETGPL 83 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+PI IKD +T G+ T S I F P + +++ D GA+++GK N+ EF +GS Sbjct: 84 FGLPIAIKDLASTAGLRTSFGSSIFADFVPQEDDFFVERIRDAGAIIIGKTNVPEFGLGS 143 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + +GP ++ + T GGSSGG++ A+A + + G+D GGS+R PA++ Sbjct: 144 NTYNPVFGPTLNAFDP-----ALTAGGSSGGAAVALALDMVPVADGSDFGGSLRNPAAWN 198 Query: 192 GTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 G +P+ G + F + G + R V D A+LL AGY Sbjct: 199 NVYGFRPSQGLVPGGPDVEVFHAQMGVDGPMGRNVADMALLLDVQAGY 246 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSMGHIYNDVFTVAV- 438 A IRT R F++ D+I PT F +G +G Y+ V+ Sbjct: 370 ASVIRTSWHRMLLSIFDR-FDLIALPTAQVFPFDVGTHWPREVAGRAMDSYHRWMQVSAF 428 Query: 439 -NMAGLPAISVPAALCEKKMPLGLQLIGQP 467 + G PA++VP +K P+G+QLIG+P Sbjct: 429 ATLGGCPAVNVPIGFDDKGRPMGMQLIGRP 458 >gi|302530189|ref|ZP_07282531.1| secreted amidase [Streptomyces sp. AA4] gi|302439084|gb|EFL10900.1| secreted amidase [Streptomyces sp. AA4] Length = 521 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 136/490 (27%), Positives = 218/490 (44%), Gaps = 34/490 (6%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIG 77 + ++A +L Y++ IE N +++A ++ A AAA+ESD R +R LEGIP+ Sbjct: 47 RQLTAEQLTRGYLRRIEELNPKLHAVVQT-NPDALAAAKESDTRRRAHSSRSALEGIPVL 105 Query: 78 IKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNET 135 +K+ T T A S + G RP ++ + Q+L GA++LGK N+ E++ S + Sbjct: 106 LKENIDTADRQTTTAGSTAMLGSRPAKDAFLVQRLRAAGAIVLGKANLSEWSNFRSDAQI 165 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 + V R+ + D+ +P GSS GS+ A A L +IGT+T GSI PA+ T TVG Sbjct: 166 PGWSGVAGQTRNPYALDR-SPCGSSSGSAVAAAAGLATVAIGTETDGSIVCPAAATSTVG 224 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV--NLPVPDY 253 +K + G SR G++ D G I R V D+A+ L +AG D D V +P Sbjct: 225 VKTSLGVVSRSGVVPITAQHDTPGPIARNVTDAALTLSVLAGADPADPASVAAEAAIPKD 284 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV------EISLPHT 307 R +++G +GI ++ + D+ ++ + L+ G +V +IS T Sbjct: 285 LRLDRNALRGQRIGIWRKGHTG-IDEQADRVFESTVHTLRSLGVTVVDGADVEDISWSVT 343 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 LPA E +L Y V G L Y + ++I Sbjct: 344 PDLLPALLT----ECKHDLNAYLAVTPGDHPRNLSELIAYNDQHRDVEMPLFDQSLLIDA 399 Query: 368 YVLSSRCYDSHYLRARKIRT-LIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGS 425 D Y R R T L +R + +G+D I+T + A PL + Sbjct: 400 NKADGILTDQTYRRHRAAATGLAQRSIDDVLAAKGLDAIVT-LSGLPASPLDRP------ 452 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE---- 481 G T ++AG P I+VPA +P+G+ +G + + L + E Sbjct: 453 -GDPRFLSSTRNTSVAGCPNITVPAGFA-GPLPVGISFLGAKYHDAQLLAFAYAYEQASH 510 Query: 482 -KEAGYFRPH 490 ++A + PH Sbjct: 511 ARQAPRYLPH 520 >gi|92118200|ref|YP_577929.1| amidase [Nitrobacter hamburgensis X14] gi|91801094|gb|ABE63469.1| Amidase [Nitrobacter hamburgensis X14] Length = 449 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 140/287 (48%), Gaps = 19/287 (6%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIK 79 +A +LVD + I + + +I+V A A AAAE D R +N GIP+ IK Sbjct: 20 TARKLVDDCLAKIADKAGEGARVFIQVDADGAVAAAEAMDGLRKVNAAPSPFAGIPVSIK 79 Query: 80 DCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F KG ++A S LD P ++ V +L G V++G+ NM EFA +Y Sbjct: 80 DLFDIKGQVSRAGSRALDDAPPAANDAPVVARLRRAGFVVIGRTNMTEFAYSGLGINPHY 139 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P PGGSS G++ ++ + ++GTDTGGS R PA++ G VG KP Sbjct: 140 G---TPKNRWQRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRIPAAYCGIVGYKP 196 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T R G + + +LD G I R+V A + +A DE A V PV Sbjct: 197 TARRIPLDGGVPLSVTLDSYGPIARSVGCCAAMDAVLA--DEPIAPVVPRPV-------- 246 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +G+ + +P LD LS + + ++ + L +AGA I I++P Sbjct: 247 ---KGLRLAMPTTVMLDDLSSAVARAFEHALDRLANAGAVIERIAVP 290 >gi|297744647|emb|CBI37909.3| unnamed protein product [Vitis vinifera] Length = 988 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 136/523 (26%), Positives = 210/523 (40%), Gaps = 104/523 (19%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARD 70 S+++L S+ +LVD Y+ IE N ++ + IEV AR A+++D I + + + Sbjct: 39 SQNKLTSR-----QLVDFYLHQIEALNPELRSVIEV-NPDAREQADKADAEIKSKKELGE 92 Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD TK ++T A S+ L G ++ V ++L GAV+LGK +M E+ Sbjct: 93 LHGIPVLLKDSINTKDKLNTTAGSYALLGAEVSGDAAVVERLRKAGAVILGKASMSEWYQ 152 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC---------------AA 174 +RS+ + + + P G + +G C A Sbjct: 153 ---------------FRSLKTRNGWCPRSGQGVNPYVASGEPCGSSSGSAVSVAANMVAV 197 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+GT+T GSI PA VG KPT G SR G+I +P D G I R+V D+ +L A Sbjct: 198 SLGTETDGSIICPADVNSVVGFKPTVGLTSRTGVIPISPRQDSVGPICRSVLDAVYVLDA 257 Query: 235 IAGYDECDATCVN-----LPVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQ 287 I G+D D +PV Y++ L++ I G +G+ + + Y T ++ Sbjct: 258 IVGFDPRDGEATKEASKFIPVGGYKQFLNKDGIAGKRLGVVRNPFSGFYNRSTAISAFEA 317 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEM 346 ++ L+ GA +V+ L +E D IL Sbjct: 318 HLTVLRQRGAILVD---------------------------------NLEIENVDIILNP 344 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 YE+ S E K + I Y+ L L D + E G +V + Sbjct: 345 YESGESTALLAEFK--LNINEYLKELTHSPVRSLAGIIAFNLNNSDLEKTDENGQEVFIA 402 Query: 407 PTTPTSAFPLGKEENNSGS-MGHIYNDVF-------------TVAVNMA------GLPAI 446 +GK+E + M ++ D F T+ MA G P + Sbjct: 403 AEMTNG---IGKQERMAMEMMANLSRDGFEKLMMENELDATVTLGSGMATVLAIGGYPGV 459 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 SVPA MP G+ G E L V E+ RP Sbjct: 460 SVPAGYDGDGMPFGICFGGLKGMEPKLIEVAYGFEQATKIRRP 502 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 111/435 (25%), Positives = 185/435 (42%), Gaps = 61/435 (14%) Query: 78 IKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 I+D ATK ++T A S L ++ V +KL GA++LGK ++ E+A Sbjct: 587 IEDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSEWA-------- 638 Query: 137 YYGPVISP--W--RSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 Y+ + P W R+ + + TP GSS GS+ +VA L A S+GT+T GSI P+ Sbjct: 639 YFRATVIPSGWCARTGQGKNPYVLSATPCGSSSGSAISVAANLAAVSLGTETDGSILCPS 698 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD----AT 244 VGIKPT G SR G++ +P D G I RTV D+ +L I G+D D + Sbjct: 699 HVNSVVGIKPTLGLTSRAGVVPISPRQDTVGPICRTVSDAVEVLDVIVGFDYRDEATRTS 758 Query: 245 CVNLPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +P Y++ L+ + ++G +GI + + + + + ++ L+ GA +V+ Sbjct: 759 SKYIPQGGYKQFLNANGLKGKRLGIVRNPFYMFENGSVLPQVFEHHFHTLRQGGAILVD- 817 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IGFGQEVK 360 H + A S E ++ A + + L K+++ T + I F + Sbjct: 818 ---HLEIANIDVIYGSSGEGAALEAEF---KISLNAYLKELVASPVRTLADVIAFNNKFS 871 Query: 361 HRIMI-----GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAF 414 H I T++ + + K+ L + F + E +D ++TP + S Sbjct: 872 HLEKIKEYGQDTFLQAEATNGINKKTLLKLARLSRNGFEKLMKEHKLDALVTPGSNVSP- 930 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + + G P ISVPA K +P G+ G E L Sbjct: 931 ----------------------VLAIGGFPGISVPAGYDSKGVPFGICFGGLKGSEPKLI 968 Query: 475 SVGQIIEKEAGYFRP 489 + E+ +P Sbjct: 969 EIAYSFEQATKIRKP 983 >gi|254461207|ref|ZP_05074623.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacterales bacterium HTCC2083] gi|206677796|gb|EDZ42283.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodobacteraceae bacterium HTCC2083] Length = 475 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 119/487 (24%), Positives = 219/487 (44%), Gaps = 42/487 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK-ARAAAEES 59 M++L + +E R+ SKD+SAVEL+ + + I+ N +NA + + ++ A A+ + Sbjct: 1 MTDLLYETATELATRIASKDLSAVELMQASLDRIDAVNETVNAVVSLRDREDCIADAKLA 60 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 D G L G+P+ IKD ++G+ T S I + ++ GA+++ Sbjct: 61 DSIAPKG---PLHGLPVAIKDLANSEGLLTSMASPIFADNIAQKDDLFVARMKAAGAIVI 117 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF +GS S +G +P+ ++ G S G ++A G + A G+D Sbjct: 118 GKTNTPEFGLGSHTFNSVHGATRNPY----DPNRSAGGSSGGAAAALATGMIPIAD-GSD 172 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCS-RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 GS+R P ++ G++PTYG + F L AG + RT +D A+LL AG+ Sbjct: 173 MMGSLRNPGAWNNVYGLRPTYGLVPLDMPGDMFHHQLAVAGPMGRTPQDVALLLDVQAGF 232 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGA 297 D + P +++ LD ++GM +G ++ Y + + +T + + ++ GA Sbjct: 233 DARHPHSFS-QAPSFDQ-LDGDLKGMKLGWLGDWGGVYAMDAGVLETCETSLKGFENLGA 290 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + ++ P + + ++ +R GK L ENTR + Sbjct: 291 TVERLAPPFSAEKIWEAWV--------------KLRAWANAAGKAALFNNENTRKL-LKD 335 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + I G ++ + H + A IRT E F D ++ P+ FP+ Sbjct: 336 DAIWEIETG---MALSAMEVHEMSA--IRTAWFAKLNEMFAT-YDALMLPSAQVWPFPV- 388 Query: 418 KEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E ++ + D + + V++ G+P++++PA E +P+G+Q+ G + Sbjct: 389 -EWDSPKKIADRVMDTYHRWMEVVIPVSLVGVPSLNIPAGFNEVGLPMGIQVFGPRHSDA 447 Query: 472 TLFSVGQ 478 L +GQ Sbjct: 448 KLLKIGQ 454 >gi|170724599|ref|YP_001758625.1| amidase [Shewanella woodyi ATCC 51908] gi|169809946|gb|ACA84530.1| Amidase [Shewanella woodyi ATCC 51908] Length = 455 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 109/447 (24%), Positives = 199/447 (44%), Gaps = 49/447 (10%) Query: 50 QKARAAAEESDKRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 Q +A+ ++ D + GD + L G+ I +KD G+ + L G P +++ + Sbjct: 37 QNKQASHKQVD-NLSEGDINNQVLYGMTIAVKDNIEVAGMPNTLGNKALAGHIPQHDACI 95 Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 +L + GAV+ GK NM E A+G +N YG ++ + ++ GGSSGG++ AV Sbjct: 96 ITRLKEAGAVINGKANMHELALGVTNINPSYGHALNAYNP-----EYFAGGSSGGTAVAV 150 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A L A IGTDTGGS R PA+ G VG +PT GR G+ + + D AG + + V Sbjct: 151 ALGLADAGIGTDTGGSSRIPAALNGIVGFRPTTGRYPNDGLGLISKTRDTAGPMAKDVDT 210 Query: 228 SAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 A L +AG D+ +P + + + +GIP+ Y P + + Sbjct: 211 LARLDAVLAGEPSIDS------LPSFPP------KKLRLGIPRAYFYGNTEPAVLAAVED 258 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + L AG ++E+ P EA + + V Y + +D +E Sbjct: 259 VLQALAKAGVTLIEVD-PQG------------IEALNQSISFPVVLYEAKQHIQDYVEKA 305 Query: 348 ENTRSIGFGQEVKHRIMIGTY------VLSSRCYDSHYLRA-RKIRTLIKRDFTEAFEQG 400 +I ++ +I G + + + Y A R ++ + + F++ Sbjct: 306 LPGTAI---EDFAAQICSGDVKNLVDSIFNQPIPEPMYQEAINSFRPKLQSLYQDYFDKH 362 Query: 401 -VDVILTPTTPTSAFPLGKEEN---NSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCE 454 +D ++ P TP +A + + + +GS ++ A + AG+P + +P Sbjct: 363 RLDAVIFPATPLTAQKITNDNDLVILNGSEEPTFSTYIRNADPASNAGIPGLVIPIGFNP 422 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIE 481 + +P+ L++ G + + ++G++IE Sbjct: 423 EGLPISLEIDGPAGSDRQVITIGKLIE 449 >gi|224078139|ref|XP_002305493.1| predicted protein [Populus trichocarpa] gi|222848457|gb|EEE86004.1| predicted protein [Populus trichocarpa] Length = 516 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 18/301 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN--GDARDLEG 73 + +++ +LV YI+ ++ N + +E+ A + +R I G + L G Sbjct: 37 FKQNKLTSRKLVKFYIKEVDRLNPVLKGVLELNPDALLQANQADYERRIKAPGSSVGLHG 96 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 IPI +KD ATK ++ A + L G ++ V KL GA++ GK +M E+A S Sbjct: 97 IPILLKDLIATKDKMNNTAGTFALLGSVVPRDAGVVMKLRKAGAIIFGKASMTEWAAFRS 156 Query: 133 NETSYYGPVISPWRSMDSTDKFTP-------GGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 T G SP F P GSS GS+ +VA + A S+GT+T GSI Sbjct: 157 -LTLPNG--FSPRGGQGKARSFNPYNLSADPCGSSSGSAISVAANMVAVSLGTETDGSIL 213 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD----EC 241 P++ VGIKPT G SR G+I+ +P D G + RTV D+ +L AI G D E Sbjct: 214 CPSNANSVVGIKPTVGLTSRAGVITISPRQDTIGPLCRTVSDAVHVLDAIVGVDSNDNET 273 Query: 242 DATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 A +P Y++ L + ++G +GI + L ++S + ++ + L+ GA ++ Sbjct: 274 KAASKYIPRGGYKQYLKPKGVKGKRLGIVRNPFLSFVSEPESQAFENHLQTLRQEGAVLL 333 Query: 301 E 301 + Sbjct: 334 D 334 >gi|329850142|ref|ZP_08264988.1| biuret hydrolase [Asticcacaulis biprosthecum C19] gi|328842053|gb|EGF91623.1| biuret hydrolase [Asticcacaulis biprosthecum C19] Length = 410 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 120/451 (26%), Positives = 202/451 (44%), Gaps = 70/451 (15%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHI-L 96 N + NA+ ++ +AR A S L G+P +KD F G+ T A + + L Sbjct: 14 NDRHNAFTRILVDEARRDAATSKT-------GRLAGVPFAVKDLFDIAGLPTTAGARMRL 66 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 D ++TV +L GAV++G NMDE+A G + +++G ++P + D+ Sbjct: 67 DATPAKADATVITRLKAEGAVLIGTTNMDEYAYGFATVNAHFGTTLNPH----APDRLAG 122 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 G S G ++A AG + A +G+DT GSIR PAS G G++P G+ F +LD Sbjct: 123 GSSGGSAAAVAAGVVPLA-LGSDTNGSIRVPASLCGVWGMRPAMDDMPLEGVFPFVHALD 181 Query: 217 QAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD- 275 G TR++ D + + + +C + T P+ RL Sbjct: 182 TVGPFTRSLADLKLAYEVM--------SC--------------RVLATTSATPRIARLTG 219 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 + + D ++ + DA + LP + A A ++I+ A+ + Sbjct: 220 FFARNADPDALAAVATI-DAE----PLDLPMAEAARSAAFLITGAQGGA----------- 263 Query: 336 LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 L + D L+ TR++ + V+ R++ G + S + YLRA+ + + TE Sbjct: 264 LHL---DTLK----TRAMDYDPAVRDRLIAGAMLPS-----ATYLRAQDMAARWRAQVTE 311 Query: 396 AFEQGVDVILTPTTPTSA--FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAAL 452 AF Q D+++ P+TP +A G E N ++ N + +++AG+P IS P + Sbjct: 312 AF-QTCDILIAPSTPVTAPRIDAGTIEINGQTVSARANLGILAQPLSLAGIPVISAP--V 368 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +P GLQ P RE LF +E E Sbjct: 369 RKSGLPFGLQFATAPGREALLFDYLARLEAE 399 >gi|294627516|ref|ZP_06706099.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598147|gb|EFF42301.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 486 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 126/473 (26%), Positives = 204/473 (43%), Gaps = 57/473 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 RS+ A L + I +N ++ A ++ +A A A + G D L G+P Sbjct: 53 RSQPPLAARLATQTLTRINQANDRLCAITRLLPARAAADAARVQAALAGGSDGGALAGVP 112 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T A + + P ++ V Q+L + GAV++G NMDEFA G + Sbjct: 113 FVVKDLFDVAGQVTTAGAAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEFAYGFATV 172 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P D+ GGSSGGS+AAVA L ++G+DT GSIR PA+ G Sbjct: 173 NAHYGTTANP-----HDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGIY 227 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PT+G G+ F +LD G +V D L+ + Y+ Sbjct: 228 GLRPTHGAVPLDGVFPFVDALDVVGPFATSVAD----LRRV-----------------YD 266 Query: 255 RALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 Q + G + RL + +D + G+ L A + I LP + A A Sbjct: 267 VLRGQPLPACHAGKLRVARLGGWFERNLDPDLEAGLQTLLAACNSLSSIDLPEAERARAA 326 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ AE R+ R L G F + R++ G + +S Sbjct: 327 AFVLTAAEGGH---RH---RSALTAHGAQ------------FDPATRDRLLAGLQLPASA 368 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIY 430 D+H D A VDV++ P TP A + ++ ++ Sbjct: 369 VADAHRF------AQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDDLPVSARAN 422 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +FT + +A P ++ P ++PLG+QLI P RE+ LF++ +E++ Sbjct: 423 LGIFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFALAAQLERD 474 >gi|217959429|ref|YP_002337979.1| amidase [Bacillus cereus AH187] gi|222095572|ref|YP_002529630.1| amidase [Bacillus cereus Q1] gi|229138653|ref|ZP_04267235.1| Amidase [Bacillus cereus BDRD-ST26] gi|217067896|gb|ACJ82146.1| amidase family protein [Bacillus cereus AH187] gi|221239630|gb|ACM12340.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus Q1] gi|228644772|gb|EEL01022.1| Amidase [Bacillus cereus BDRD-ST26] Length = 536 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 137/511 (26%), Positives = 225/511 (44%), Gaps = 76/511 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +NA E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNAVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTSKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ V ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 E D + V D ER D SI G+ +G+ + +D ++ L+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGLKGKNIGLL--FSVDQQDENRKAVAEKIRKDLQ 363 Query: 294 DAGAKIVEI---------SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDI 343 DAGA + E +L +Y E N+ Y + + V+ K+I Sbjct: 364 DAGAILTEYIQLNNGGVDNLQTLEY-----------EFKHNVNDYFSQQKNVPVKSLKEI 412 Query: 344 LEM--YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQG 400 + ++ R I +GQ +I S+ D + + K++ E+G Sbjct: 413 IAFNKKDSNRRIKYGQ-----TLIEASEKSAITKDEFEKVVQTSQENAKKELNRYLVEKG 467 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 +D ++ + EE V AV AG P ++VPA P+G Sbjct: 468 LDALVM---------INNEE------------VLLSAV--AGYPELAVPAGYDNNGEPVG 504 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +G+ F E+ LF++G E+++ +P K Sbjct: 505 AVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|146341477|ref|YP_001206525.1| putative amidase [Bradyrhizobium sp. ORS278] gi|146194283|emb|CAL78305.1| putative amidase [Bradyrhizobium sp. ORS278] Length = 498 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 137/499 (27%), Positives = 222/499 (44%), Gaps = 52/499 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L +E L+ K IS V L+DS ++ I N +NA + + ARAAA ++ Sbjct: 1 MTALCDQTANELVKLLKFKAISPVALLDSCLERIGAVNPAVNAVVTLDEPGARAAARRAE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 ++ G D L G+P+ IKD T G+ + S IL G P + +L GA++ Sbjct: 61 SELLRGEDKGPLHGLPVLIKDTQDTAGMRSTYGSPILAGNIPAIDQASVARLRAAGAIIF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E+A G + +G +P+ ++ S SSGGS+AA+A + + G+D Sbjct: 121 GKTNTPEWAAGGNTRNPVFGATGNPFDTLRSAAG-----SSGGSAAALACGMAPLASGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R PA F G VG +P+YG + L G + R V D+A++L +A D Sbjct: 176 TGGSLRNPAGFCGIVGFRPSYGLVASEKRAHGWSCLSTDGPMARDVADTALMLSVMASDD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTV--GIPK--EYRLDYLSPTIDKTWQQGISWLKDA 295 D LP ++++G +P E R L+ T D + ++ A Sbjct: 236 VRDPLAYTLP--------GEAVRGQPARWAVPPQVELRKLRLAFTEDFNFAPTEQLIRRA 287 Query: 296 -GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV------EGKDILEMYE 348 A++ I A AEA+ + + D LR GK+ E E Sbjct: 288 FRARVSRI----------APLFAEAAEAAPDCSGADETFAVLRASLFLTQHGKNYRERPE 337 Query: 349 NTRSIGFGQEVKHRIMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 G V+ + G +Y L+ + RA +T I R + F + DV+++P Sbjct: 338 M-----IGPNVRANVEEGLSYSLAD------FSRAAANQTRIYRAYQSFFAKH-DVLISP 385 Query: 408 TTPTSAFPLGK----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 T S P + E + + + + + AV +AG PA+S+P + +P GLQ+ Sbjct: 386 TITLSPRPWSELYPAEIDGAPTKSYFHWLALAYAVTLAGHPALSLPLGVDNNGLPFGLQI 445 Query: 464 IGQPFREETLFSVGQIIEK 482 +G + + V +E+ Sbjct: 446 VGPRGGDALVLGVAAALEQ 464 >gi|119494944|ref|XP_001264270.1| N-acylethanolamine amidohydrolase, putative [Neosartorya fischeri NRRL 181] gi|119412432|gb|EAW22373.1| N-acylethanolamine amidohydrolase, putative [Neosartorya fischeri NRRL 181] Length = 616 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 113/451 (25%), Positives = 200/451 (44%), Gaps = 48/451 (10%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP 101 A++E ++ RAAAE S +R G +G+P+ +KD +G S++ F+ Sbjct: 150 AFVESQVERIRAAAEASTQRYKQGQPLGPFDGVPVAVKDEVHVEGYRRNLGSNL--DFKG 207 Query: 102 HYEST--VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 +E T QK + GA+++GK M E + ++N YG +P ++ GGS Sbjct: 208 GFEGTSWCVQKWEEAGAIIIGKTTMHELGLDTTNNNPNYGTPRNP-----HNQRYYCGGS 262 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS AV L ++G D GGSIR P+SF G G+KPT+ R S S AP++ G Sbjct: 263 SGGSGYAVGAGLVPIALGADGGGSIRIPSSFCGIWGLKPTHNRVSGFPTASLAPTVGVYG 322 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ---GMTVGIPKEYRLDY 276 + ++ D A+ + +A V+ PD ++ + Q T+GI + +D Sbjct: 323 PMAASIDDLALAYRLMAAPAPATEDPVSATFPDPMSSISSTAQRPRSKTIGIVPSW-IDR 381 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 P + + + + + +V+I++P+ A+ + AE +S L + G Sbjct: 382 AEPPVRAVFDAALDFYRKQDYTVVDIAIPYLPEGQRAHVLTIMAEIASGL---KPAQIGA 438 Query: 337 RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 +L + +G + ++++ + A+++R L+ Sbjct: 439 LTAPNKVL------------------VSMGMWQITAQ----DLIAAQRLRNLLMAHLAYL 476 Query: 397 FEQGVD-VILTPTTPTSAFPLGKEEN----NSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 F Q +ILTPT+P + + E + S + N + N +G PAIS PA Sbjct: 477 FRQHPGLLILTPTSPIPGWRIESETDLARGVSDGKASVRNMEYVWLANFSGCPAISCPAG 536 Query: 452 LC----EKKMPLGLQLIGQPFREETLFSVGQ 478 ++P+G+ +G+ EE L + + Sbjct: 537 YSGGDKGGRVPVGVMAMGEWGTEEDLIAFAR 567 >gi|239982934|ref|ZP_04705458.1| amidase [Streptomyces albus J1074] Length = 477 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 128/487 (26%), Positives = 210/487 (43%), Gaps = 68/487 (13%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 +++A EL + ++A N ++NA +E +D A L G+P IK Sbjct: 16 EVTAAELRTAALEAARAVNPRINAIVETW---------PADDGPGPAGA-PLAGVPFLIK 65 Query: 80 DC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D A G T+ S + G +S + +++ G V G+ E A + E Y Sbjct: 66 DIGAAMAGRRTELGSRLAAGNVARADSALMRRVRRAGLVTFGRTATSEMAYSITTEPVLY 125 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW S SSGG+ AAVA + + GTD GS+R PA++ G G+KP Sbjct: 126 GATRNPWDPERSAGG-----SSGGAGAAVAAGVVPLAHGTDAAGSLRVPAAYNGLFGLKP 180 Query: 199 TYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 T GR +S P D+ AG ++RTVRDSA LL ++G + D P Sbjct: 181 TRGR------VSLGPDFDELFSGLAVAGGVSRTVRDSAALLDQVSGPEPGDPYFAQQPSR 234 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW--QQGISWLKDAGAKIVEI--SLPHT 307 Y + + + +G+ + + W ++ + + DA ++ V + SL H Sbjct: 235 PYAEEVTRDPGRLRIGV------------LLQAWGGRRTTAPVADALSRTVALLESLGHR 282 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM--- 364 + AEA + + V R+ ++ + + FG+ V + Sbjct: 283 ---------VEEAEAGLGVGWEEYVLANARLFTANLAATVDEL-AAAFGRPVDSSTLEPA 332 Query: 365 -IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG------ 417 + Y R + ++ A +R + R +F D++LTPT P PLG Sbjct: 333 TLAGYHYGQRVGGAQFVAALAVRNRVSRSLARSFGT-YDILLTPTVPELPVPLGAYAESA 391 Query: 418 KEENNSGSMGHIYNDV-FTVAVNMAGLPAISVP-AALCEKKMPLGLQLIGQPFREETLFS 475 + + G +G +++ FT+ NMAG PA+SVP AA E +P+G+Q E LF Sbjct: 392 RTLDGLGWIGTVFDRAPFTMPFNMAGTPAMSVPLAADAETGLPIGMQFAAGHGLESRLFR 451 Query: 476 VGQIIEK 482 + +E+ Sbjct: 452 LAGQLEQ 458 >gi|255574718|ref|XP_002528267.1| amidase, putative [Ricinus communis] gi|223532304|gb|EEF34105.1| amidase, putative [Ricinus communis] Length = 509 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/315 (29%), Positives = 153/315 (48%), Gaps = 31/315 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L FM +++L SK +LV Y+ I+ N + + +E+ A + +R Sbjct: 40 QLAFM-----QNKLTSK-----QLVTFYLNQIQTLNPLLRSVLEINPDALDQAEKADRER 89 Query: 63 IINGDAR---DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +N R +L GIP+ IKD TK ++T S+ L G ++ V +KL GAV+ Sbjct: 90 QLNQGGRSLGELHGIPVLIKDGIGTKDKLNTTCGSYALLGSEVARDAGVVEKLRCAGAVI 149 Query: 119 LGKLNMDEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 LGK + E+ S E + G ++P+ + P GSS GS+ +VA + A Sbjct: 150 LGKASQSEWYRTRSMEIPDGRCARGGQAVNPYVKWGN-----PCGSSSGSAISVATNMVA 204 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 S+GT+T SI P+ VG+KPT G SR G++ +P D G I RTV D+ +L Sbjct: 205 VSLGTETDASILCPSDCNSVVGLKPTVGLTSRAGVVPVSPRQDTVGPICRTVSDAVYVLD 264 Query: 234 AIAGYDECDATCVN-----LPVPDYERAL-DQSIQGMTVGIPK-EYRLDYLSPTIDKTWQ 286 AI G+D D +P Y++ L + ++G +G+ + + TI T+ Sbjct: 265 AIVGFDPRDYAATKEAAKYIPAGGYKQFLTEDGLKGKRLGVVRYPFSESSNDSTIFSTFN 324 Query: 287 QGISWLKDAGAKIVE 301 Q + L+ GA +++ Sbjct: 325 QHLEVLRQEGATVLD 339 >gi|50308629|ref|XP_454317.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643452|emb|CAG99404.1| KLLA0E08119p [Kluyveromyces lactis] Length = 1829 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 120/421 (28%), Positives = 188/421 (44%), Gaps = 47/421 (11%) Query: 65 NGDARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 N + L G+PI +KD KG+ T AC L ++P +S V + L D GAV++GK N Sbjct: 65 NKEELPLYGVPIAVKDNIDYKGLPTTAACPSYL--YQPTRDSYVVELLRDAGAVVIGKTN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +D+FA G S YG + DK+ GGSS GS++ V + S+GTDT GS Sbjct: 123 LDQFATGLVGTRSPYGKTPCVF-----NDKYVSGGSSAGSASVVGRGIVPLSLGTDTAGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC-D 242 R PA+ +G+KPT G S G++ SLD + + D+ I K + D D Sbjct: 178 GRVPAALNNLIGLKPTKGAFSCRGVVPACKSLDCVSVFALNLSDAEIAFKVMNKPDLLED 237 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVE 301 P + + Q + +T+ IPKE + + T + K + + ++ LK+ GAKIV Sbjct: 238 EYSREFP----KNPISQYPKDLTIAIPKE--VPWFGETENPKLYTKAVASLKNTGAKIVV 291 Query: 302 ISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + P + A Y E + RY R D L N + V Sbjct: 292 VDFEPLLELARCLY------EGAWVAERYCATR--------DFLAT--NPPESSLDETVV 335 Query: 361 HRIMIGTYVLSSRCYDSHYLRA---RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 + I ++ + Y R +K+ L+K +DV+ PT P + P Sbjct: 336 NIIKGAVKFDAADAFKFEYKRQGILQKVNLLLK---------DIDVLCVPTCPLN--PKL 384 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +E + + +T VN+A L A++VP+ +P G+ LIG+ F + L + Sbjct: 385 EEVAQEPVLVNSRQGTWTNFVNLADLAALAVPSGFRSDGLPNGITLIGKKFSDYALLDLA 444 Query: 478 Q 478 + Sbjct: 445 K 445 >gi|116202775|ref|XP_001227199.1| hypothetical protein CHGG_09272 [Chaetomium globosum CBS 148.51] gi|88177790|gb|EAQ85258.1| hypothetical protein CHGG_09272 [Chaetomium globosum CBS 148.51] Length = 665 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 128/507 (25%), Positives = 213/507 (42%), Gaps = 75/507 (14%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIE----NSNSQMNAYIEVVAQKARAAAEESD 60 + +VS+ R S ++ ++ + + I N A+ E K AAA ES Sbjct: 72 KYYSVSDYRKLYLSGTLTPTDVAEVLLPLIRRDVPNPTEHSTAFFETRVDKVLAAAREST 131 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP---HYESTVTQKLWDNGA 116 +R G + L+G+P +KD + +G T S + P H S +KL GA Sbjct: 132 QRYKEGRSLGPLDGVPTAVKDEYDIEGYRTSLGSRN-TYYSPDEDHGTSWCVEKLEAAGA 190 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 + LGKL+M EF + ++ +G +P + GGSS G++ AV+ L + Sbjct: 191 INLGKLSMHEFGLDTTGNNPIHGTPRNP-----HNRHYYTGGSSSGTAYAVSAGLIPIGL 245 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+D GGSIR P+S G G+KPT+GR S + + G I + A + I+ Sbjct: 246 GSDGGGSIRIPSSLCGVFGLKPTHGRLSFRPGPNVCITCACLGPIAADISSLAAVFSVIS 305 Query: 237 GYDECDATCVNLPVP---DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL- 292 + LP P R D I +GIP+ + + +PTI + I L Sbjct: 306 A-PHSSSPFPPLPTPLSLGTPRPNDPKI----LGIPQAW-IARSTPTIQALCNRLIRQLV 359 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 G V+I++P + A+ + +A++ L G+ RV +L + T + Sbjct: 360 TTHGYTTVDITIPFLREGQLAHALTVLTDAATLLPNPRGLTAANRV----LLALGRVTPA 415 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPT 411 + YL A+K+R L+ + ++Q +I+TPTT Sbjct: 416 ------------------------TDYLLAQKLRRLLMQHLAWLWQQHPGMLIVTPTTAC 451 Query: 412 SAFPLGKEEN------NSG-----SMGHIYNDVFTVAVNMAGLPAISVPAALCEKK---- 456 P+ E N G SM +++ N GLP++S PA + Sbjct: 452 EGLPIVDERAEMRWGVNDGDRTMQSMEYVW------MANFCGLPSLSAPAGFVPGRGGTP 505 Query: 457 -MPLGLQLIGQPFREETLFSVGQIIEK 482 +P+G+ +G+ EE L G+++E+ Sbjct: 506 DVPVGVMAMGEWCAEEQLLRFGRVLEE 532 >gi|114769834|ref|ZP_01447444.1| amidase family protein [alpha proteobacterium HTCC2255] gi|114549539|gb|EAU52421.1| amidase family protein [alpha proteobacterium HTCC2255] Length = 441 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 132/471 (28%), Positives = 206/471 (43%), Gaps = 61/471 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 IS + LV +YI AI+ Q Y V + +A AE+++ R N L+G+PI K Sbjct: 22 ISPLALVKTYINAIKKHPLQNEIYTNVSSLRALKEAEQAEVRAKNNTRLSMLDGVPISWK 81 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSY 137 D F +K I+T+A + +L G P ++ V Q G V LGK +M E A N + Sbjct: 82 DLFDSKDINTEAGTLLLSGRVPQSDAVVLQHATKAGLVCLGKTHMSELAFSGLGLNPMTK 141 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 P I+ ++D+ + G++G + +A IG+DTGGS+R PA++ VG+K Sbjct: 142 TTPCIN---NLDAVSGGSSSGAAGSVAFNLASI----GIGSDTGGSVRVPAAWNDLVGLK 194 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 T G S G++ P D G + R V D++++ + D P R Sbjct: 195 TTSGDISLEGVVPLCPKFDTIGPLCRNVEDASVIYSILKNKDY---------TPIKSR-- 243 Query: 258 DQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 +S+Q M + GI KE ++ L P + + + + KI + P + L I Sbjct: 244 -KSLQLMRLEGITKE-GIENL-PLM--AFNDACAKISGKDIKITKDRFPILEKLLSLSGI 298 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 I EA Y L EGK +MY E+ +R M G Sbjct: 299 IYTFEA------YQVWGKVLEKEGK---KMYP---------EILNRFMAG-----KNYSQ 335 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF-- 434 + Y A I I+ D+ F Q D ++ PT+P P K + S S + ++ Sbjct: 336 NEYKDAWTIVNNIRADWIN-FTQEFDAVILPTSPI--LPPNKSKLLSNSSYYKRANLLAL 392 Query: 435 --TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 T NM GL +I++P + + G ++G PF E L S+ IE + Sbjct: 393 RNTRIGNMLGLCSITLPTS----QPSCGFTIMGAPFSELNLLSIAAKIESD 439 >gi|187919925|ref|YP_001888956.1| allophanate hydrolase [Burkholderia phytofirmans PsJN] gi|187718363|gb|ACD19586.1| allophanate hydrolase [Burkholderia phytofirmans PsJN] Length = 484 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 124/484 (25%), Positives = 214/484 (44%), Gaps = 50/484 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M++ R R R+ ++ +LV++ + A + + A+I +++ E + + Sbjct: 11 MSIEALRARYRAGSLTPAQLVEA-VAARTSGDDPHRAWIRPLSRN------EMIRYVDAL 63 Query: 67 DARDLE-----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + RD++ G+P IKD GI T A + P + V +L GA+ +GK Sbjct: 64 EGRDIDTLPLYGVPFAIKDNIDLAGIPTTAACPAY-AYTPEASAPVVARLIAAGAIPIGK 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G S + S +G + ++D ++ GGSS GS+ +VA L A S+GTDT Sbjct: 123 TNLDQFATGLSGQRSPHGACRN---ALDP--RYASGGSSSGSAVSVALGLAAFSLGTDTA 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA+F G +G+KPT G S LG++ SLD I R+ D+ + A G Sbjct: 178 GSGRVPAAFHGLLGLKPTKGVLSTLGVVPACKSLDCVSIFARSADDAQCVFDAARGVAPS 237 Query: 242 D--ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAK 298 D A P + S++G+ G+P+ +L++ T + ++ L+ AGA+ Sbjct: 238 DPYAREFQPPTGAAQLGAQPSLRGVRFGVPRANQLEFFGDTSYAHAFDAALTRLRAAGAE 297 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VEI P A++ L EG + E R Q Sbjct: 298 LVEIDF-------------EPFLATARLL----------YEGPWVAERLAAIREFADTQP 334 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 +I + + + + A R R Q +D I+TPT+ T+A + + Sbjct: 335 DALHPVIREIIGGAARWSAADAFAAFDRLAFLRMQAAHVWQRIDAIVTPTSATTA-TVDE 393 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKMPLGLQLIGQPFREETLF 474 E + + + +T VN+ L A++VPA +C +P G+ + + + L Sbjct: 394 LEADPIRVNSRFG-YYTNFVNLLDLAALAVPAGVCTVGRHAGLPFGVTFVARAHEDRVLL 452 Query: 475 SVGQ 478 + + Sbjct: 453 DLAR 456 >gi|331697929|ref|YP_004334168.1| amidase [Pseudonocardia dioxanivorans CB1190] gi|326952618|gb|AEA26315.1| Amidase [Pseudonocardia dioxanivorans CB1190] Length = 454 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 8/271 (2%) Query: 32 QAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA 91 Q I++ + +I+ + A AAA ++ G L+G+ +G+KD G+ T A Sbjct: 24 QEIDDRVRAVITWIDGSREDAVAAARRTEAGRSRG---PLDGVLVGLKDNIDVAGVVTTA 80 Query: 92 CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 + L ++TV ++L + GAV+ KLNM E A G++ + YG +PW Sbjct: 81 GASFLAHNVAPADATVVRRLREAGAVVSAKLNMAELAWGATTQNLTYGACRNPW----DL 136 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 D+ PGGSSGGS AA+A C ++GTDTG S+R PA+ G VG++P+ G S G++ Sbjct: 137 DRI-PGGSSGGSGAALAAGYCDLALGTDTGASVRIPAALNGVVGLRPSVGSISIDGVLPA 195 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKE 271 A + D G + R D+A L + + G+D D V A+ + + G+TVG+ + Sbjct: 196 AKTQDTVGPMARRAIDAARLTEVLTGFDPADPYSVASTGAPATSAIGKPLDGLTVGVARR 255 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + D L + + + + WL D G ++ Sbjct: 256 FFFDGLDDGVGERIETFLGWLADQGTVAADV 286 >gi|291454772|ref|ZP_06594162.1| amidase [Streptomyces albus J1074] gi|291357721|gb|EFE84623.1| amidase [Streptomyces albus J1074] Length = 483 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 128/487 (26%), Positives = 210/487 (43%), Gaps = 68/487 (13%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 +++A EL + ++A N ++NA +E +D A L G+P IK Sbjct: 22 EVTAAELRTAALEAARAVNPRINAIVET---------WPADDGPGPAGA-PLAGVPFLIK 71 Query: 80 DC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D A G T+ S + G +S + +++ G V G+ E A + E Y Sbjct: 72 DIGAAMAGRRTELGSRLAAGNVARADSALMRRVRRAGLVTFGRTATSEMAYSITTEPVLY 131 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW S SSGG+ AAVA + + GTD GS+R PA++ G G+KP Sbjct: 132 GATRNPWDPERSAGG-----SSGGAGAAVAAGVVPLAHGTDAAGSLRVPAAYNGLFGLKP 186 Query: 199 TYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 T GR +S P D+ AG ++RTVRDSA LL ++G + D P Sbjct: 187 TRGR------VSLGPDFDELFSGLAVAGGVSRTVRDSAALLDQVSGPEPGDPYFAQQPSR 240 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW--QQGISWLKDAGAKIVEI--SLPHT 307 Y + + + +G+ + + W ++ + + DA ++ V + SL H Sbjct: 241 PYAEEVTRDPGRLRIGV------------LLQAWGGRRTTAPVADALSRTVALLESLGHR 288 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM--- 364 + AEA + + V R+ ++ + + FG+ V + Sbjct: 289 ---------VEEAEAGLGVGWEEYVLANARLFTANLAATVDEL-AAAFGRPVDSSTLEPA 338 Query: 365 -IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + Y R + ++ A +R + R +F D++LTPT P PLG ++ Sbjct: 339 TLAGYHYGQRVGGAQFVAALAVRNRVSRSLARSFGT-YDILLTPTVPELPVPLGAYAESA 397 Query: 424 ------GSMGHIYNDV-FTVAVNMAGLPAISVP-AALCEKKMPLGLQLIGQPFREETLFS 475 G +G +++ FT+ NMAG PA+SVP AA E +P+G+Q E LF Sbjct: 398 RTLDGLGWIGTVFDRAPFTMPFNMAGTPAMSVPLAADAETGLPIGMQFAAGHGLESRLFR 457 Query: 476 VGQIIEK 482 + +E+ Sbjct: 458 LAGQLEQ 464 >gi|119873082|ref|YP_931089.1| amidase [Pyrobaculum islandicum DSM 4184] gi|119674490|gb|ABL88746.1| Amidase [Pyrobaculum islandicum DSM 4184] Length = 401 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 111/382 (29%), Positives = 183/382 (47%), Gaps = 64/382 (16%) Query: 105 STVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSS 164 + V ++L GAV+LGK NM E A+G +N ++GP +P + T G S G + Sbjct: 76 AAVVRRLMAEGAVVLGKTNMHELALGVTNINPHFGPTRNP----HDPSRITGGSSGGSAG 131 Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 A G + IGTDTGGS+R PA+ G VG KP YG+ GI + SLD G I R+ Sbjct: 132 AVAIG-VADLGIGTDTGGSVRIPAALCGVVGYKPPYGKIPMDGIYPLSQSLDHVGFIARS 190 Query: 225 VRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 V++ +L A+ G+ D + P + A+ + G+T P Y ++K Sbjct: 191 VKELVNILSAV-GWAPRDLS----PPKRFRFAV---LMGITE--PSRY--------VEKA 232 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 + + + L++ G E+ L T+Y+ ++ A++ Sbjct: 233 FWKAVEVLENIGGFRDEVFLDSTKYSAARAALLLSEAAAN-------------------- 272 Query: 345 EMYENTRSIG--FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 Y+ RS+G G++V + +G + S Y+ A++I+ + F F++ D Sbjct: 273 -YYDYLRSVGEHMGRDVATLLGVGVALPS-----VAYIVAKRIKEEATQYFNILFKK-YD 325 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGH---IYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 V++TPTT A P+ E+ +S +M Y ++F N+ G PAISVPA +P+ Sbjct: 326 VVVTPTTAIEAVPI--EQADSITMRRKLLAYTEIF----NLTGHPAISVPAP-ATSSLPV 378 Query: 460 GLQLIGQPFREETLFSVGQIIE 481 GLQ+ + E+TL ++ + E Sbjct: 379 GLQVAAR--DEDTLLAIAEAYE 398 >gi|209552353|ref|YP_002284268.1| allophanate hydrolase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539465|gb|ACI59397.1| allophanate hydrolase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 601 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 116/418 (27%), Positives = 183/418 (43%), Gaps = 44/418 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD G+ T A +RP +STV +L GA+++GK N+D+FA G Sbjct: 69 LWGVPFAVKDNIDAAGLPTTAACPAYT-YRPEADSTVVARLKAAGAIIIGKTNLDQFATG 127 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S YG +P D+ + GGSS GS+ VA L A ++GTDT GS R PA+F Sbjct: 128 LNGTRSPYG---APRSVFDAA--YISGGSSSGSAVTVASGLAAFALGTDTAGSGRVPAAF 182 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VGIKPT G G + S+D I TV D + K G D D P Sbjct: 183 NNLVGIKPTPGLLPNTGTVPACKSVDCITIFAATVGDGVAIRKVAEGLDAAD------PF 236 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + + + + +G+ + ++ ++ + Q I + GA IV + Sbjct: 237 SRRAKPANLPVSRLRIGVLTDAEREFFGDKEVEALYDQAIERARVLGATIVPFDYAPFR- 295 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 EA++ L YDG R+ +E + T + F V+ I Sbjct: 296 -----------EAAALL--YDGPWVAERLAA---VETFLATNAADFDPTVRGIIEGARGK 339 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS---AFPLGKEENNSGSM 426 + ++ Y ++ L ++ TEA + DV+L PT PT+ A L +G + Sbjct: 340 TAVEAFNGRY----RLEELRRK--TEAEWEKADVLLLPTAPTTYTVADMLANPVVLNGRL 393 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 G +T VN+ AI+VPA + +P G+ +I F ++ L + + + A Sbjct: 394 GR-----YTNFVNLLDCAAIAVPAGFGKSGLPGGITVIAPAFTDDALAPLADALHRAA 446 >gi|325181146|emb|CCA15561.1| glutamyltRNA(Gln) amidotransferase subunit A putativ [Albugo laibachii Nc14] Length = 445 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 118/434 (27%), Positives = 193/434 (44%), Gaps = 40/434 (9%) Query: 56 AEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWD 113 A ES +R G L+G+P+ +KD G T + + P E S +L Sbjct: 14 ARESTERYAKGATLGVLDGVPVAVKDEIDVIGYRTTRGTILPKAPSPAKEDSPSVARLRS 73 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 A+++GK NM + +G + +YG +P + T SS GS+AAVA + Sbjct: 74 AAAIIVGKTNMHDMGVGVTGLNVHYGTPKNPHNASHYTGG-----SSSGSAAAVACGIVP 128 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++ D GGSIR PA F G VG+KPT+ R L S+ G I +VRD+AI Sbjct: 129 LALAVDGGGSIRIPAPFCGVVGLKPTFQRVPSLPTELL--SVGHFGPIANSVRDTAIAYA 186 Query: 234 AIAGYDECDATCVNLPVPDYERALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 I+G E + P D+ + D +S+ G+ +G E ++ SP + K+ ++ Sbjct: 187 TISGSHESFPRGRSQPSVDFS-SFDKTKSLAGLKIGY-FEALANHSSPEVAKSVRRVCQE 244 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L++ GAKI+ + L H L A+ + +E +S L ++ L G D Sbjct: 245 LRNKGAKIIPVQLHHFHTILLAHALTVLSELASMLDQH---VESLHTMGPDA-------- 293 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 RIM+ +L+S A+++R R + VD+ ++PTT Sbjct: 294 ----------RIMM---MLASHFSALELTSAQRVRGFALRQIQQEIFDKVDIFISPTTGI 340 Query: 412 SAFPLGKEENNSGSM-GHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 +A + + G M +D+ F + N+ G+P I+V +PL +Q + + Sbjct: 341 TAPKISADALEYGEMSAEQISDILRFCIYANLVGVPGIAVRIGHDSGGLPLSVQFQARHW 400 Query: 469 REETLFSVGQIIEK 482 E+ LF V E+ Sbjct: 401 DEDVLFRVAHTTEQ 414 >gi|296156097|ref|ZP_06838936.1| allophanate hydrolase [Burkholderia sp. Ch1-1] gi|295893603|gb|EFG73382.1| allophanate hydrolase [Burkholderia sp. Ch1-1] Length = 486 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 127/495 (25%), Positives = 229/495 (46%), Gaps = 50/495 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+++ + R R+ ++ +LVD+ I A + + +A+I +++ +E + + Sbjct: 13 MSIAGLQARYRAGSLTPAQLVDA-IAARTSGDDPHHAWIRPLSR------DEMMRYVDAL 65 Query: 67 DARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + RD L GIP IKD GI T A + P + V +L GA+ +GK Sbjct: 66 EGRDMGTLPLYGIPFAIKDNIDLAGIPTTAACPAY-AYTPTASAPVVARLIAAGAIPIGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G S + S +G + ++D ++ GGSS GS+ +VA L A ++GTDT Sbjct: 125 TNLDQFATGLSGQRSPHGACRN---ALDP--RYASGGSSSGSAVSVALGLAAFALGTDTA 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA+F G +G+KPT G S +G++ SLD I R+ D+ + A G E Sbjct: 180 GSGRVPAAFHGLIGLKPTKGLLSTVGVVPACKSLDCVSIFARSADDAQRVFDAARGVTEG 239 Query: 242 DATCVNLPVPD--YERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAK 298 D P + +S++G+ G+P+ +L++ T + ++ L+ AGA+ Sbjct: 240 DPYAREFQPPQAVTQPGAQRSLRGVRFGVPRANQLEFFGDTSYAHAFDAALTRLRAAGAE 299 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 ++EI P A++ L Y+G R+ + + +T+ Sbjct: 300 LIEIDF-------------EPFLATARLL-YEGPWVAERLAA---IRQFVDTQPDAL-HP 341 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V I+ G S+ + + R L++ E +++ +D I+TPT+ T+A + + Sbjct: 342 VIREIIGGAARWSAADAFAAFDRL----ALLRMQAAEVWQR-IDAIITPTSATTAT-VDE 395 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKMPLGLQLIGQPFREETLF 474 E + + + +T VN+ L A++VPA +C +P G+ + + + L Sbjct: 396 LEADPIRVNSRFG-YYTNFVNLLDLSALAVPAGVCAIGRHAGLPFGVTFVARAHEDVMLL 454 Query: 475 SVGQIIEKEAGYFRP 489 + + E P Sbjct: 455 DLARAWHGETAPASP 469 >gi|257485206|ref|ZP_05639247.1| amidase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 250 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 123/245 (50%), Gaps = 9/245 (3%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E+ +R ++ + L + + IE NS +NA+ +V A A A + G Sbjct: 4 VIEAAALVRKGCMTPIRLTELCLATIETHNSTLNAFGDVYADVALEQAWTMTAELQRGQV 63 Query: 69 R-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIP GIKD F+T G+ T S P ++ + ++L + GA++LGK EF Sbjct: 64 RGPLHGIPFGIKDLFSTAGLRTTRGSLTALDSVPVQDAPIIRRLKNAGAIILGKTATTEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++ + +G +PW T GGSS GS+ AVA + A++G+D GGS+R P Sbjct: 124 GWTGASTSRVFGNGRNPWDP-----ALTSGGSSSGSAIAVAARMVPAALGSDGGGSVRIP 178 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 SF G +K T GR S L AG ITRTVRDSA+L ++G D D Sbjct: 179 GSFCGAFALKGTLGRIPTWPW-SATEMLSHAGPITRTVRDSALLFDILSGPDPLDHQA-- 235 Query: 248 LPVPD 252 LP PD Sbjct: 236 LPAPD 240 >gi|299783369|gb|ADJ41367.1| Possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus fermentum CECT 5716] Length = 489 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 224/516 (43%), Gaps = 70/516 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L ++ +E +R +SA ELV + + I+ N +NA V++ + +AA E+D+ Sbjct: 3 TDLLSLSGTEMAQAVREGKVSATELVSASLAKIKEENPALNA---VISLREKAALNEADQ 59 Query: 62 RIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G + G+P +K T +G+ + + G S + L + G ++LG Sbjct: 60 LIDRG--QPFLGVPFLLKGLGQTFRGLPATNGNRLFQGQVAQSSSNFARALTNAGFIVLG 117 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N EF + ++ YG +PW + PGGSSGG+ AAVA + + +D Sbjct: 118 QTNYPEFGFKNITDSKMYGDAHNPWNL-----AYYPGGSSGGAGAAVASKMVPIAGASDG 172 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG--IITRTVRDSAILLKAIAGY 238 GGSIR PAS+T T+G+KPT GR G + AG IT+ V D+A LL + Sbjct: 173 GGSIRIPASWTSTIGLKPTRGRVIT-GPSDWRSWQGAAGSFAITKDVEDTARLLDVLQAL 231 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGA 297 V L P + L Q+++ + VG E + + P Q ++L+ G Sbjct: 232 QPAAVFQVPLQKPSFADLLKQTVKPVRVGFTTESPVGTPVDPEAVAAVHQAATFLEQNGF 291 Query: 298 KIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILE-----MYENT 350 ++ EI +P AL +YY+++ E + A +D V L R D +E +Y Sbjct: 292 EVEEIEVPTDGRALIDSYYLMNEGETA---AMFDQVEASLGRAVTVDDMEPLTWALYRTG 348 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R I TY + +D ++ TL + + LTPTT Sbjct: 349 RHIS----------AATYSNALAAWDQA---GYQMATL---------HETYPLALTPTTA 386 Query: 411 TSAFPLGKEENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAIS 447 +A + + + + + + FT N+ G PAIS Sbjct: 387 MTAPRIDQPMVSEAQLDQMRDIDALTPAAQQRFIFDQWLPSLTRSPFTQQANLTGEPAIS 446 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +P L + +PLG+QL+ +E L V ++ E + Sbjct: 447 LPTHLTKAGLPLGIQLVAGKGQEGLLLQVAKLFETQ 482 >gi|197106134|ref|YP_002131511.1| amidase family protein [Phenylobacterium zucineum HLK1] gi|196479554|gb|ACG79082.1| amidase family protein [Phenylobacterium zucineum HLK1] Length = 495 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 153/506 (30%), Positives = 241/506 (47%), Gaps = 73/506 (14%) Query: 16 LRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 +R +A LV +Y I A++++ ++N+ I + Q A A AE D G R L Sbjct: 1 MRDGRATAHALVRAYFDRIAAVDDAGPKLNSVIALNPQ-ALADAERLDAERRAGRTRGPL 59 Query: 72 EGIPIGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-M 129 GI + +KD A G+ T A S L ++ + ++L D GA++LGK N+ E+A Sbjct: 60 HGITVLLKDNIEADIGLPTTAGSLALADNVTGRDAPIVKRLRDAGAIVLGKANLSEWANF 119 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S+ S + V R+ D+ T GSS GS AAVA L AA+IGT+T GSI PA+ Sbjct: 120 RSTRSISGWSAVGGLTRNPYGLDR-TACGSSSGSGAAVAAGLAAAAIGTETDGSITCPAA 178 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 TG VG+KPT G SR I+ +P+ D AG +TRTV D+A +L+ IAG D D Sbjct: 179 MTGIVGLKPTVGLVSRALIVPISPAQDTAGPMTRTVADAAAVLQVIAGSDPADPATAEAD 238 Query: 250 VP--DYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 DY ALD+ +++G +G+ ++ + + +D+ ++ ++ LK AGA++VEI Sbjct: 239 AKKVDYLGALDRDALKGARIGVWHGFKGRHAA--LDEAFEAALADLKAAGAELVEIK--- 293 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYG--LRVEGKDILEMY-------ENTRSIG--- 354 PAEA LAR G G LR E K L+ Y +R++ Sbjct: 294 -----------GPAEA--ELARI-GELEGELLRWEFKAALDDYLARTPPAVKSRTLADLI 339 Query: 355 ------------FGQEVKHRIM----IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 FGQE+ + + + ++ ++ L A+ + ++ E Sbjct: 340 AFNRAEIRETPLFGQEIFEQAVKAPPASDPAMQTKRAEARRLAAQALDRMLA-------E 392 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 Q V I+ P S P + +G G + T+ ++G P ++VP +P Sbjct: 393 QKVLAIVAP----SGGPASIVDPVNG--GRFFGSPSTLPA-VSGYPHLTVPMGHV-TGLP 444 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEA 484 +G+ +G + E L S+G E+ A Sbjct: 445 VGISFLGPAWSEARLLSLGFAYEQAA 470 >gi|39934770|ref|NP_947046.1| amidase [Rhodopseudomonas palustris CGA009] gi|39648620|emb|CAE27141.1| putative amidase [Rhodopseudomonas palustris CGA009] Length = 500 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 143/514 (27%), Positives = 217/514 (42%), Gaps = 55/514 (10%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S +F V++ L++K +SAVEL I IE + ++NA +A +A +D Sbjct: 14 SPWSFATVTDLSAALKAKQVSAVELTQDAIGRIERHDDKVNAVCVRDFDRALQSARAADL 73 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP+ +K+ F G+ T F ++ +++ G V+LGK Sbjct: 74 ALSRGGREPLLGIPMTVKESFNVAGLPTTWGFVEQKNFVAAADALAVERVKAAGGVILGK 133 Query: 122 LNMDEFAMG---SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 N+ A+G S NE YG +P+ TPGGSSGGSSAA+A A S+G+ Sbjct: 134 TNV-PVALGDWQSYNEI--YGTTGNPYDL-----GRTPGGSSGGSSAALAAGFGALSLGS 185 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-------SLDQAGIITRTVRDSAIL 231 D GGS+R PA + G KPT+G C G L G + R+ D A+L Sbjct: 186 DIGGSLRVPAHYCGVYAHKPTFGLCPARGHTPPPFPPLPSNRDLSVIGPMARSAADLALL 245 Query: 232 LKAIAGYDEC-DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 L IAG D D L D A +++ V + + L + Q Sbjct: 246 LDVIAGTDPIFDGIAYQL---DLPAARHTALKDFRVLLLDTHPLLPTGAAVHSALQTLAD 302 Query: 291 WLKDAGAKIVEIS--LPHTQYALPAY--YIISPAEASSNLARYDGVR-YGLRVEGKDILE 345 L AGA + S LP Y ++S A Y G + + D Sbjct: 303 GLTKAGASVTRSSPLLPDLAETSRVYMRMLLSFLAAGFPPDLYAGAQAMAAGLSATDDSL 362 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 E R I VLS R ++ A RT ++ + E F + D ++ Sbjct: 363 AAERLRGI---------------VLSHR----DWVAADSRRTGLRAQWRELF-KSFDAVI 402 Query: 406 TPTTPTSAFPLGKEENNS------GSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKM 457 P PT A+P E H Y D V+ + GLP+ ++P A+ + + Sbjct: 403 CPVMPTPAYPHDHHEPQEERRILIDGKPHPYVDQLVWPGIATLPGLPSTALPIAMSDDGL 462 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G+Q++G + T + ++IE+E G F+P K Sbjct: 463 PIGVQIVGPWLEDRTPLKLAELIEREFGGFKPPK 496 >gi|91789187|ref|YP_550139.1| amidase [Polaromonas sp. JS666] gi|91698412|gb|ABE45241.1| Amidase [Polaromonas sp. JS666] Length = 428 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 131/480 (27%), Positives = 207/480 (43%), Gaps = 61/480 (12%) Query: 5 NFMAVSESRD---RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 N + +S +RD R+ +++A + +YI+ I++ + A+ A A +A D+ Sbjct: 3 NILTLS-ARDLAARVSRGELTAEAVTRAYIEQIQSCELSVKAWQFFDADMALQSARALDR 61 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + +A L G+P+G+KD T + T S I G RP +++ D G V+LGK Sbjct: 62 HSHSSNAL-LRGVPVGVKDLMDTVDMPTSYGSPIYAGHRPKFDAACVAACRDAGMVVLGK 120 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EFA T G +P D+ TPGGSS GS+AAVA + ++GT T Sbjct: 121 TVTTEFA------TFQPGVTCNPRAPADAPR--TPGGSSSGSAAAVAANMVPLALGTQTA 172 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI +PA++ G +G KPT+G G+ APSLD G R+V D+A + A+ Sbjct: 173 GSIVRPAAYCGVIGYKPTHGTLPLAGVKPLAPSLDTIGAFARSVDDAAFFVGAL------ 226 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 T V L D +R QS + VGI + D S + + + AGA + + Sbjct: 227 --TRVKL---DPQR---QS--ALRVGICRTAHWDLASDATRRVLEHSARQFEKAGAHVHD 276 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LP + AL I A ++ + R+ + S F Q + Sbjct: 277 LVLPASCDALTQAQIQIMAYEAAAAFAPERQRHAAQF-------------SPAFAQLL-- 321 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 L + + + A+ + +R FE VDV+L P+ E Sbjct: 322 -------ALGQSLHGADFAAAQLLAIAARRALDTVFES-VDVLLAPSA---------EGE 364 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G N +F + G P + VPA E MP+G+ +IG + + S +E Sbjct: 365 APAGLGATGNPIFNRLWTLLGNPCVHVPAGTGEHGMPVGVTVIGPRWADALTLSAAHTLE 424 >gi|149186488|ref|ZP_01864800.1| amidase family protein [Erythrobacter sp. SD-21] gi|148829715|gb|EDL48154.1| amidase family protein [Erythrobacter sp. SD-21] Length = 492 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 129/477 (27%), Positives = 207/477 (43%), Gaps = 61/477 (12%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 I A++++ ++NA I V + A E ++ L+G + +KD T+ + T Sbjct: 33 IAALDDAGPELNAVIAVNPAGPQEAREAEAAGLL------LQGRTVLVKDNIETRELPTT 86 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE-TSYYGPVISPWRSMD 149 A S L ++ + L G V+LGK N+ E+A N+ TS + V R+ Sbjct: 87 AGSLALADNLTGRDAPLIANLRAAGGVVLGKTNLSEWANIRDNDSTSGWSGVGGLTRNPH 146 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + D+ GSS GS AAVA A+IGT+T GSI PAS G VG KP+ G SR ++ Sbjct: 147 AIDR-NACGSSSGSGAAVAAQFAWAAIGTETNGSITCPASINGVVGFKPSVGLVSRTHVV 205 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVPDYERAL-DQSIQGMTVG 267 + + D AG + R+V D+A+LL +IAG D D AT DY L D S+ G +G Sbjct: 206 PISSTQDTAGPMARSVADAALLLSSIAGEDPADSATLGAQRRADYHTGLADFSLDGARIG 265 Query: 268 IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA 327 + + + + ++ ++ L+ AGA +V+I + A + + E + Sbjct: 266 VMRNQMGNR--DDVKTVFETALADLEAAGATLVDIEFELDEEVYDASFTVLMFELREEMG 323 Query: 328 RY------DGVRYGL---------------RVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 +Y DG+ L R G+D+ E+ E T Sbjct: 324 KYLASLPGDGMARSLADLIAFNAAHPAEEMRWFGQDLFELAETTT--------------- 368 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT-PTSAFPLGKEENNSGS 425 Y+ +A +I D A E V ++ PT P L +N +GS Sbjct: 369 ----DREAYEEARAKALRIAGAETLDRIMA-ENEVAFLIAPTRGPAWTSDLVNGDNFNGS 423 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +G F +AG P ++VP E +P+G+ G +R+ + +G E+ Sbjct: 424 IG------FGTPAAVAGYPHLTVPMGAIE-GLPVGISFFGGKWRDFEVLQLGAAYER 473 >gi|168042262|ref|XP_001773608.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675147|gb|EDQ61646.1| predicted protein [Physcomitrella patens subsp. patens] Length = 518 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 9/251 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L FM++ + LRSK I++V+LV Y ++ + +NA + + A A +DK Sbjct: 73 DLAFMSILQLGSLLRSKQITSVDLVKLYTARLKKVDYVLNAVVTYTEKLALEQATAADKL 132 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S + + ES V QKL GAV++ K Sbjct: 133 LAEGVYLGPLHGIPYGLKDIIAVPGYKTTWGSSVFKNQVINEESLVYQKLKAAGAVLIAK 192 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + + GSS G +A + +IG++T Sbjct: 193 LATGALAW---DDIWFGGRTKNPWNIHEGST-----GSSAGPAACTSAGNVPFAIGSETA 244 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI P+S TG G++P++G R ++S + S+D+ G + R+ D AI+L I G D Sbjct: 245 GSIVYPSSRTGITGLRPSFGMVGRSWVMSLSESMDKLGPLCRSAADCAIVLDVIRGKDPR 304 Query: 242 DATCVNLPVPD 252 D + ++ + D Sbjct: 305 DWSSEDIHLKD 315 >gi|297810845|ref|XP_002873306.1| amidase family protein [Arabidopsis lyrata subsp. lyrata] gi|297319143|gb|EFH49565.1| amidase family protein [Arabidopsis lyrata subsp. lyrata] Length = 622 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 12/270 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + ++++ +++ ELV Y++ ++ N + A + A+ A A+E+D Sbjct: 162 DIAFMSVLELGELIKTRQVTSEELVRIYLKQLKRYNHVLEAVVTYTAELAYKQAKEADDL 221 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A T S E+ V ++L +GAV++ K Sbjct: 222 LSQGTYLGPLHGIPYGLKDTIAVPRYRTTWGSTSFKDQVLDIEAWVYKRLKASGAVLVAK 281 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 282 LVAGSMAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 333 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D Sbjct: 334 GSITYPAARCGVTALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPD 393 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE 271 D + + +E I +TVG K+ Sbjct: 394 DLSSREIA---FEDPFSVDITKLTVGYTKD 420 >gi|229069496|ref|ZP_04202785.1| Amidase [Bacillus cereus F65185] gi|228713635|gb|EEL65521.1| Amidase [Bacillus cereus F65185] Length = 536 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 221/502 (44%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLVETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ +++I + E FE V Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGSE-----------KSVITK---EEFENVVQ------ 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 +G+ F E+ LF++G E+++ Sbjct: 507 FVGKQFGEKELFNIGYAYEQQS 528 >gi|83952499|ref|ZP_00961230.1| amidase family protein [Roseovarius nubinhibens ISM] gi|83836172|gb|EAP75470.1| amidase family protein [Roseovarius nubinhibens ISM] Length = 443 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 139/484 (28%), Positives = 210/484 (43%), Gaps = 58/484 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E M+ +E + +I A L ++Y+QAI Y VV + A + Sbjct: 1 MQEWLSMSAAELGRGIGRGEIDAEALCETYLQAIAAHPYAKRIY-SVVTEDRARAEARAA 59 Query: 61 KRIINGDAR--DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R R L+G+PI KD F + G+ T+A S +L G P ++ V + G V Sbjct: 60 ARRAQLGQRLGPLDGVPISWKDLFDSAGVATEAGSQLLAGRVPGTDAEVLRNATMAGLVC 119 Query: 119 LGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 LGK +M E A N + P I+ + PGGSS G++A+VA L A I Sbjct: 120 LGKTHMSELAFSGLGLNPRTATPPCIN-------DPEAVPGGSSSGAAASVAFGLAACGI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+DTGGS+R PA++ VG+K T GR S G++ D G I R+V D A++L A+ Sbjct: 173 GSDTGGSVRIPAAWNDLVGLKTTSGRLSSKGVVPLCERFDTVGPIGRSVEDCALMLAALD 232 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 G T V+L ++GM + LD + ++ + L AG Sbjct: 233 G----SGTPVDL--------RGARLEGMRFAALQTTVLDEIRDAPRAAYENAVERLHAAG 280 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 AKI + P A+P ++ AEA YG + G+ I E + F Sbjct: 281 AKIERLDAPEVAEAMPLSGLLFTAEA-----------YG--IWGETIAANPE----VMF- 322 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ R G L+S Y + + RK+ L R+ A G D +L P++P P Sbjct: 323 PPIRERFEGGRDALASD-YIAGW---RKLNAL--REAWAARVAGYDAVLMPSSPI--LPP 374 Query: 417 GKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E + ++ ++ T N+ GL A+S+P + G+ L G F EE Sbjct: 375 NAERLLTDDSYYVTENLLALRNTRVGNLMGLAAMSLPTGVPS----CGIMLCGAAFGEER 430 Query: 473 LFSV 476 L V Sbjct: 431 LLRV 434 >gi|229590715|ref|YP_002872834.1| putative amidase [Pseudomonas fluorescens SBW25] gi|229362581|emb|CAY49489.1| putative amidase [Pseudomonas fluorescens SBW25] Length = 490 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 133/488 (27%), Positives = 212/488 (43%), Gaps = 61/488 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R D+ EL+++ I IE +NA E + + AR AA S R G G+P Sbjct: 21 IRRGDVQPGELLEAVIDRIELVEPHLNAVAERLYESAREAALAS--RPGRG---VFAGVP 75 Query: 76 IGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD F+ G SH L GFR +++ ++ G V+LG EF S E Sbjct: 76 TLIKDLFSPVNGAAMTNGSHALGGFRADFDAEHVSRIRRAGCVILGTSTSPEFGTSYSTE 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++ +G +PW ++D + + GG++ +A V F + G D GGS+R PAS G Sbjct: 136 SNRFGATRNPW-NVDHSAGGSSGGAAALVAARVVPF----AHGNDGGGSLRVPASCCGVF 190 Query: 195 GIKPTYGRCSRLGIISFAPSLDQ--AGI-----ITRTVRDSAILLKAIAGYDECDATCVN 247 G+KP+ G++ P + + AG+ IT +VRDSA+LL A AG D Sbjct: 191 GLKPSR------GLLPSGPMVGEGWAGMGTPHAITLSVRDSAVLLDATAGIDLGAPYAAP 244 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 V Y AL + + + + + ++ S + +Q + G + +SLP Sbjct: 245 QQVQPYVTALQRDPRPLRIALVEQLEPWPTSRESLEAVRQAARLCQSLGHPVEPVSLP-- 302 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG---QEVKHRIM 364 A+PA+ D V + + L++ R GF +E++ R Sbjct: 303 -VAMPAF--------------LDQVFTIIGASTRHYLDVLGQMR--GFAVQPEELEARTR 345 Query: 365 IGTYVLSSR--CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I +L S+ + Y A + + R F Q D+ILTPT P+G+ + Sbjct: 346 I---ILRSKGDVSGAQYAGAVEGIHALGRQLA-VFMQDYDLILTPTLAREPAPIGELDLQ 401 Query: 423 SGSMG--------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + H Y+ FT N +G PA+SVP +P+G G+ E TLF Sbjct: 402 DDRLSLDELIERFHSYSP-FTALFNASGQPAMSVPLYWSAAGLPMGAHFAGRFGEESTLF 460 Query: 475 SVGQIIEK 482 ++ +E+ Sbjct: 461 ALAAQLER 468 >gi|33603957|ref|NP_891517.1| amidase [Bordetella bronchiseptica RB50] gi|33568933|emb|CAE35347.1| probable amidase [Bordetella bronchiseptica RB50] Length = 475 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 126/491 (25%), Positives = 224/491 (45%), Gaps = 43/491 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R L + +SA E++ ++++AIE+ N +NA + + + AR A +D+ G Sbjct: 9 MTALQLRAELAAGHLSAREILQAHLEAIEHWNPTVNAIVTLDVEGARRRAAAADQAQARG 68 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ KD F T G+ T S + F P S V + GA+ LGK N+ Sbjct: 69 EPLGLLHGLPVAHKDSFLTAGMRTTHGSPVFADFVPERSSLVVTRQQAAGAITLGKTNLP 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF GS + +GP +P+ T GGSSGG++AA+A + + GTD GGS+R Sbjct: 129 EFGAGSQTFNAVFGPTRNPY-----DPAMTAGGSSGGAAAALACRMVPLADGTDMGGSLR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF VG++P+ GR + +L AG + RTV D+A++L A+AG D D Sbjct: 184 NPASFCNVVGLRPSPGRVPMWPTAAPYNTLSVAGPMARTVADAALMLAALAGPDARDPLT 243 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ + AL++ G V ++ + P + + Q + ++ G ++ + Sbjct: 244 IDADPGLFLGALERDFAGTRVAYAPDWGGLPVDPAVGRVLQAQLPRWEELGCRVDQ---- 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A P + +A S+ G+ + + +G+ + + VK ++ Sbjct: 300 ----ACPDF-----GQADSSFHALRGLAFAIN-QGETVRRHRD---------RVKDTVIW 340 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 T + ++ R L +R DF + +E ++ P + P ++ Sbjct: 341 NTELGLNQSGAVLAQAERDRAQLFERMHDFMQQYE----FLIGPVSQVP--PFSADQAYI 394 Query: 424 GSMGHI----YNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +G + Y D +++ G PAISVP E +P+G+Q++G+ E + + Sbjct: 395 QRIGDVEMRNYIDWMRSGYYLSLTGHPAISVPCGFTETGLPIGIQIVGRYRDERGVLQLA 454 Query: 478 QIIEKEAGYFR 488 E+ +R Sbjct: 455 HAFEQLTQCWR 465 >gi|15609500|ref|NP_216879.1| amidase [Mycobacterium tuberculosis H37Rv] gi|15841875|ref|NP_336912.1| amidase [Mycobacterium tuberculosis CDC1551] gi|31793540|ref|NP_856033.1| amidase [Mycobacterium bovis AF2122/97] gi|121638242|ref|YP_978466.1| amidase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662195|ref|YP_001283718.1| amidase [Mycobacterium tuberculosis H37Ra] gi|148823566|ref|YP_001288320.1| amidase [Mycobacterium tuberculosis F11] gi|215404289|ref|ZP_03416470.1| amidase [Mycobacterium tuberculosis 02_1987] gi|215412109|ref|ZP_03420873.1| amidase [Mycobacterium tuberculosis 94_M4241A] gi|215427739|ref|ZP_03425658.1| amidase [Mycobacterium tuberculosis T92] gi|215431303|ref|ZP_03429222.1| amidase [Mycobacterium tuberculosis EAS054] gi|215446607|ref|ZP_03433359.1| amidase [Mycobacterium tuberculosis T85] gi|218754091|ref|ZP_03532887.1| amidase [Mycobacterium tuberculosis GM 1503] gi|224990736|ref|YP_002645423.1| amidase [Mycobacterium bovis BCG str. Tokyo 172] gi|253798559|ref|YP_003031560.1| amidase amiA2 [Mycobacterium tuberculosis KZN 1435] gi|254232505|ref|ZP_04925832.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis C] gi|254365140|ref|ZP_04981186.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis str. Haarlem] gi|254551410|ref|ZP_05141857.1| amidase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187366|ref|ZP_05764840.1| amidase [Mycobacterium tuberculosis CPHL_A] gi|260201487|ref|ZP_05768978.1| amidase [Mycobacterium tuberculosis T46] gi|260205664|ref|ZP_05773155.1| amidase [Mycobacterium tuberculosis K85] gi|289443884|ref|ZP_06433628.1| amidase amiA2 [Mycobacterium tuberculosis T46] gi|289448005|ref|ZP_06437749.1| amidase amiA2 [Mycobacterium tuberculosis CPHL_A] gi|289553847|ref|ZP_06443057.1| amidase amiA2 [Mycobacterium tuberculosis KZN 605] gi|289575057|ref|ZP_06455284.1| amidase amiA2 [Mycobacterium tuberculosis K85] gi|289746141|ref|ZP_06505519.1| amidase amiA2 [Mycobacterium tuberculosis 02_1987] gi|289750961|ref|ZP_06510339.1| amidase amiA2 [Mycobacterium tuberculosis T92] gi|289754468|ref|ZP_06513846.1| amidase AmiA2 [Mycobacterium tuberculosis EAS054] gi|289758487|ref|ZP_06517865.1| amidase [Mycobacterium tuberculosis T85] gi|289762529|ref|ZP_06521907.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis GM 1503] gi|294994533|ref|ZP_06800224.1| amidase [Mycobacterium tuberculosis 210] gi|297634965|ref|ZP_06952745.1| amidase [Mycobacterium tuberculosis KZN 4207] gi|297731957|ref|ZP_06961075.1| amidase [Mycobacterium tuberculosis KZN R506] gi|298525845|ref|ZP_07013254.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium tuberculosis 94_M4241A] gi|306776628|ref|ZP_07414965.1| amidase amiA2 [Mycobacterium tuberculosis SUMu001] gi|306780401|ref|ZP_07418738.1| amidase amiA2 [Mycobacterium tuberculosis SUMu002] gi|306785151|ref|ZP_07423473.1| amidase amiA2 [Mycobacterium tuberculosis SUMu003] gi|306789512|ref|ZP_07427834.1| amidase amiA2 [Mycobacterium tuberculosis SUMu004] gi|306793837|ref|ZP_07432139.1| amidase amiA2 [Mycobacterium tuberculosis SUMu005] gi|306798234|ref|ZP_07436536.1| amidase amiA2 [Mycobacterium tuberculosis SUMu006] gi|306804110|ref|ZP_07440778.1| amidase amiA2 [Mycobacterium tuberculosis SUMu008] gi|306808682|ref|ZP_07445350.1| amidase amiA2 [Mycobacterium tuberculosis SUMu007] gi|306968511|ref|ZP_07481172.1| amidase amiA2 [Mycobacterium tuberculosis SUMu009] gi|306972740|ref|ZP_07485401.1| amidase amiA2 [Mycobacterium tuberculosis SUMu010] gi|307080445|ref|ZP_07489615.1| amidase amiA2 [Mycobacterium tuberculosis SUMu011] gi|313659291|ref|ZP_07816171.1| amidase [Mycobacterium tuberculosis KZN V2475] gi|54036718|sp|P63491|AMIA2_MYCBO RecName: Full=Putative amidase AmiA2 gi|54040683|sp|P63490|AMIA2_MYCTU RecName: Full=Putative amidase AmiA2 gi|2078036|emb|CAB08460.1| PROBABLE AMIDASE AMIA2 (AMINOHYDROLASE) [Mycobacterium tuberculosis H37Rv] gi|13882141|gb|AAK46726.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium tuberculosis CDC1551] gi|31619133|emb|CAD97245.1| PROBABLE AMIDASE AMIA2 (AMINOHYDROLASE) [Mycobacterium bovis AF2122/97] gi|121493890|emb|CAL72365.1| Probable amidase amiA2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601564|gb|EAY60574.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis C] gi|134150654|gb|EBA42699.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis str. Haarlem] gi|148506347|gb|ABQ74156.1| amidase AmiA2 [Mycobacterium tuberculosis H37Ra] gi|148722093|gb|ABR06718.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis F11] gi|224773849|dbj|BAH26655.1| amidase [Mycobacterium bovis BCG str. Tokyo 172] gi|253320062|gb|ACT24665.1| amidase amiA2 [Mycobacterium tuberculosis KZN 1435] gi|289416803|gb|EFD14043.1| amidase amiA2 [Mycobacterium tuberculosis T46] gi|289420963|gb|EFD18164.1| amidase amiA2 [Mycobacterium tuberculosis CPHL_A] gi|289438479|gb|EFD20972.1| amidase amiA2 [Mycobacterium tuberculosis KZN 605] gi|289539488|gb|EFD44066.1| amidase amiA2 [Mycobacterium tuberculosis K85] gi|289686669|gb|EFD54157.1| amidase amiA2 [Mycobacterium tuberculosis 02_1987] gi|289691548|gb|EFD58977.1| amidase amiA2 [Mycobacterium tuberculosis T92] gi|289695055|gb|EFD62484.1| amidase AmiA2 [Mycobacterium tuberculosis EAS054] gi|289710035|gb|EFD74051.1| amidase amiA2 (aminohydrolase) [Mycobacterium tuberculosis GM 1503] gi|289714051|gb|EFD78063.1| amidase [Mycobacterium tuberculosis T85] gi|298495639|gb|EFI30933.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium tuberculosis 94_M4241A] gi|308214947|gb|EFO74346.1| amidase amiA2 [Mycobacterium tuberculosis SUMu001] gi|308326723|gb|EFP15574.1| amidase amiA2 [Mycobacterium tuberculosis SUMu002] gi|308330136|gb|EFP18987.1| amidase amiA2 [Mycobacterium tuberculosis SUMu003] gi|308333997|gb|EFP22848.1| amidase amiA2 [Mycobacterium tuberculosis SUMu004] gi|308337778|gb|EFP26629.1| amidase amiA2 [Mycobacterium tuberculosis SUMu005] gi|308341459|gb|EFP30310.1| amidase amiA2 [Mycobacterium tuberculosis SUMu006] gi|308344945|gb|EFP33796.1| amidase amiA2 [Mycobacterium tuberculosis SUMu007] gi|308349256|gb|EFP38107.1| amidase amiA2 [Mycobacterium tuberculosis SUMu008] gi|308353876|gb|EFP42727.1| amidase amiA2 [Mycobacterium tuberculosis SUMu009] gi|308357821|gb|EFP46672.1| amidase amiA2 [Mycobacterium tuberculosis SUMu010] gi|308361767|gb|EFP50618.1| amidase amiA2 [Mycobacterium tuberculosis SUMu011] gi|323719030|gb|EGB28178.1| amidase amiA2 [Mycobacterium tuberculosis CDC1551A] gi|326903979|gb|EGE50912.1| amidase amiA2 [Mycobacterium tuberculosis W-148] gi|328458327|gb|AEB03750.1| amidase amiA2 [Mycobacterium tuberculosis KZN 4207] Length = 484 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 143/492 (29%), Positives = 221/492 (44%), Gaps = 51/492 (10%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L ++ +++ ELV ++AI+ S +NA+ V+ + A A A +DKR GD L GI Sbjct: 29 QLATRAVTSEELVRRSLRAIDVSQPTLNAFRVVLTESALADAAAADKRRAAGDTAPLLGI 88 Query: 75 PIGIKDCFATKGIHTQACSHILDGF-RPHYEST-VTQKLWDNGAVMLGKLNMDEFAMGSS 132 PI +KD G+ T + G+ P + V ++L GAV++GK N E Sbjct: 89 PIAVKDDVDVAGVPTAFGTQ---GYVAPATDDCEVVRRLKAAGAVIVGKTNTCELGQWPF 145 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +G +PW + + TPGGSSGGS+AAVA L A+IG+D GSIR PA++T Sbjct: 146 TSGPGFGHTRNPW-----SRRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIRIPAAWTH 200 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-ATCVNLPVP 251 VGIKP GR S + + G++ RTV D+A++L A +G E D + V Sbjct: 201 LVGIKPQRGRISTWPLPEAFNGVTVNGVLARTVEDAALVLDAASGNVEGDRHQPPPVTVS 260 Query: 252 DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D+ ++ ++ P L P I Q+ L+ G +V+ + Sbjct: 261 DFVGIAPGPLKIALSTHFPYTGFRAKLHPEILAATQRVGDQLELLGHTVVKGN------- 313 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT--- 367 P Y G+R + ++E +G + R + Sbjct: 314 -PDY----------------GLRLSWNFLARSTAGLWEWAERLGDEVTLDRRTVSNLRMG 356 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 +VLS S AR+ +R F+ VDV+L PTT P+ + + GS G Sbjct: 357 HVLSQAILRS----ARRHEAADQRRVGSIFDI-VDVVLAPTT-AQPPPMARAFDRLGSFG 410 Query: 428 H----IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 I T N+ G P+I+VPA +P+G+QL+G E L S+ +E Sbjct: 411 TDRAIIAACPSTWPWNLLGWPSINVPAGFTSDGLPIGVQLMGPANSEGMLISLAAELEAV 470 Query: 484 AGYF--RPHKWW 493 +G+ +P WW Sbjct: 471 SGWATKQPQVWW 482 >gi|332305306|ref|YP_004433157.1| Amidase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172635|gb|AEE21889.1| Amidase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 525 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 165/310 (53%), Gaps = 18/310 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAE 57 +++++ + + +++ LR +S +L D Y+Q IE ++ ++NA + Q + A Sbjct: 34 VTQMHELTLIQTQTLLRQGTLSVAQLRDYYLQRIEQLDDNGPKLNAVVTFNQQLDQQVAA 93 Query: 58 ESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 DK++ N L G + +KD T G+ A S ++ P ++ + +KL A Sbjct: 94 -LDKKLKNKVPLGTLFGAMVLLKDNIDTTGMPNTAGSWLMREHIPSKDAYLVEKLKAQDA 152 Query: 117 VMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 ++LGK N+ E+A M SS +S +G ++P S P GSS GS AVA L Sbjct: 153 IILGKTNLSEWANFRSTMSSSGWSSLHGQTLNPHDPTRS-----PCGSSSGSGVAVAADL 207 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 ++GT+T GSI PA+ G VGIKPT G SR GII A S D AG +TR+V D+ I+ Sbjct: 208 TLLAVGTETDGSITCPAAVNGIVGIKPTLGLVSRSGIIPIAHSQDTAGPMTRSVADAVIM 267 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L+A+ G D DA + P+ E ++G +G+ + + Y P +D ++ ++ Sbjct: 268 LEAMMGLDPNDAASI-APLSLSEHLKIDGLKGKRIGVVRNM-MGY-HPQLDDVFEAQLNV 324 Query: 292 LKDAGAKIVE 301 LK+AGA IV+ Sbjct: 325 LKEAGAIIVD 334 >gi|33591696|ref|NP_879340.1| amidase [Bordetella pertussis Tohama I] gi|33571339|emb|CAE44816.1| probable amidase [Bordetella pertussis Tohama I] gi|332381115|gb|AEE65962.1| amidase [Bordetella pertussis CS] Length = 475 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 126/491 (25%), Positives = 224/491 (45%), Gaps = 43/491 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M + R L + +SA E++ ++++AIE+ N +NA + + + AR A +D+ G Sbjct: 9 MTALQLRAELAAGHLSAREILQAHLEAIEHWNPTVNAIVTLDVEGARRRAAAADQAQARG 68 Query: 67 DARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ KD F T G+ T S + F P S V + GA+ LGK N+ Sbjct: 69 EPLGLLHGLPVAHKDSFLTAGMRTTHGSPVFADFVPERSSLVVTRQQAAGAITLGKTNLP 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF GS + +GP +P+ T GGSSGG++AA+A + + GTD GGS+R Sbjct: 129 EFGAGSQTFNAVFGPTRNPY-----DPAMTAGGSSGGAAAALACRMVLLADGTDMGGSLR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF VG++P+ GR + +L AG + RTV D+A++L A+AG D D Sbjct: 184 NPASFCNVVGLRPSPGRVPMWPTAAPYNTLSVAGPMARTVADAALMLAALAGPDARDPLT 243 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++ + AL++ G V ++ + P + + Q + ++ G ++ + Sbjct: 244 IDADPGLFLGALERDFAGTRVAYAPDWGGLPVDPAVGRVLQAQLPRWEELGCRVDQ---- 299 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 A P + +A S+ G+ + + +G+ + + VK ++ Sbjct: 300 ----ACPDF-----GQADSSFHALRGLAFAIN-QGETVRRHRD---------RVKDTVIW 340 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKR--DFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 T + ++ R L +R DF + +E ++ P + P ++ Sbjct: 341 NTELGLNQSGAVLAQAERDRAQLFERMHDFMQQYE----FLIGPVSQVP--PFSADQEYI 394 Query: 424 GSMGHI----YNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +G + Y D +++ G PAISVP E +P+G+Q++G+ E + + Sbjct: 395 QRIGDVEMRNYIDWMRSGYYLSLTGHPAISVPCGFTETGLPIGIQIVGRYRDERGVLQLA 454 Query: 478 QIIEKEAGYFR 488 E+ +R Sbjct: 455 HAFEQLTQCWR 465 >gi|239607685|gb|EEQ84672.1| amidase [Ajellomyces dermatitidis ER-3] Length = 554 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 131/501 (26%), Positives = 222/501 (44%), Gaps = 71/501 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L S S E+V S++ IE N ++NA + + +A A++ DK +A L I Sbjct: 42 LFSGRTSCREVVFSFLARIEEYNPKINAVVSL-NPRALEYADDMDKAFGENNANGSLFCI 100 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD + T + T S L +P ++ + L D+GA++LGK+N+ E A+ + Sbjct: 101 PILLKDNYNTVDMKTTGSSRALKDSQPTADAPSVKALRDSGAIILGKVNLHELALEGLSV 160 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S G ++P+ D T GSSGG+ AA+A GTDT S+R PAS Sbjct: 161 SSLGGQTLNPY---DLTRTPG--GSSGGTGAAIAASFAVLGTGTDTVNSLRSPASANSLF 215 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP- 251 I+PT G SR G+I + + D G I R+++D+A L +A GYD D +P Sbjct: 216 SIRPTRGLISRTGVIPVSYTQDVLGPIARSLKDAATALTVMANIGYDPQDNATALVPESV 275 Query: 252 ---DYERAL--DQSIQGMTVGIPKEY----RLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 DY +AL ++G+ +G+ + + R SP ++K IS L+ AGA ++ I Sbjct: 276 LGVDYTKALVAPGRLKGIRLGLIEGFFNRTRDSETSP-VNKVMNDMISKLRAAGATVITI 334 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV--- 359 H I + E S +L R E +++++ Y + ++G + Sbjct: 335 ---HES-------IYNSIEISKDLDVQ-------RFEFRELMDAYLQSETLGGSRPSSLA 377 Query: 360 ------------KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + + T ++SS ++ R I+ L T +D I+ P Sbjct: 378 ELYSSGGYLVIPEQHSYVTTALVSSTSNATYAARQYGIQHLKLALQTTFKSHSLDAIIYP 437 Query: 408 TTPTSAFPLG--KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPL 459 G + +G +G + G P +++PA +P+ Sbjct: 438 EQQNLVVKTGSPSQSGRNGILGAV-----------TGFPVVTIPAGFSPASKDAPDGVPI 486 Query: 460 GLQLIGQPFREETLFSVGQII 480 G++++G P+ E+ L S+ I Sbjct: 487 GMEILGLPWTEQKLLSIASSI 507 >gi|27378392|ref|NP_769921.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium japonicum USDA 110] gi|27351540|dbj|BAC48546.1| bll3281 [Bradyrhizobium japonicum USDA 110] Length = 455 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 129/476 (27%), Positives = 195/476 (40%), Gaps = 56/476 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 ++AV+ + + I+ + + +NA + + A A D R+ G+ L G+PI +KD Sbjct: 20 MTAVDTAKAALGRIDAAKA-LNAVVTTDPARTLADAAAVDDRLRAGETMPLAGVPILVKD 78 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 G S + F ++ ++L GAV++G EFA + YGP Sbjct: 79 NIWASGWRITQGSRLFADFIAPQDAIAIERLRKAGAVIVGIGATSEFASKGVTTSPLYGP 138 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 P +D TPGGSSGG + AVA L +IGTD GGS R+P + G G KP+Y Sbjct: 139 TRHP---LDPA--LTPGGSSGGPATAVAAGLVPLAIGTDAGGSSRRPPAHVGVAGFKPSY 193 Query: 201 GRCSRLGIISFAP-------SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G I + P L I V D A+ +A+AG D D + Sbjct: 194 ------GAIPYGPGFAEPFFGLSVIAPIAADVADIALAFEAMAGADPRDPDAAGI----A 243 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG-ISWLKDAGAKIVEISLPHTQYALP 312 + A D I G+ + LD +D G +S + A + I+L + Sbjct: 244 QEAED--IAGLRIAFSPRLGLDV---AVDDVVANGLVSAVARLSAAGLSIALRDPTWPAG 298 Query: 313 AY-YIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A + P + + A + D R V DI E S G +V G V Sbjct: 299 ATEEALMPLQHAGLAALHGDAFRKDPTVFDPDIARQIERGLSWS-GADVA-----GALVA 352 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGSMG 427 S+ ++ ++ L LTPT P A+P LG + + Sbjct: 353 SAAIANAFAAFFAEVDLL----------------LTPTVPCVAWPFTQLGPDMIGGRAAS 396 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + VFT VN A LPAIS+P + +P GLQ+I + ++ TL + IE + Sbjct: 397 PRAHAVFTPFVNHARLPAISLPCGTDARGLPFGLQIIARRGQDRTLLRAARHIEAQ 452 >gi|42567719|ref|NP_196353.2| amidase family protein [Arabidopsis thaliana] gi|332003759|gb|AED91142.1| Amidase family protein [Arabidopsis thaliana] Length = 659 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 12/270 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + ++++ I++ ELV Y++ ++ N + A + + A A+E+D Sbjct: 199 DIAFMSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDL 258 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S E+ V ++L +GAV++ K Sbjct: 259 LSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAK 318 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 319 LVTGSMAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 370 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+ PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D Sbjct: 371 GSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPD 430 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE 271 D + + +E I +TVG K+ Sbjct: 431 DLSSREIA---FEDPFSVDITKLTVGYTKD 457 >gi|229155533|ref|ZP_04283641.1| Amidase [Bacillus cereus ATCC 4342] gi|228627851|gb|EEK84570.1| Amidase [Bacillus cereus ATCC 4342] Length = 536 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 210/477 (44%), Gaps = 69/477 (14%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH-T 89 IQ + + +N+ E+ A + +R N + +L GIP+ +KD T+ + T Sbjct: 98 IQEHDQNGITLNSVTEINPNAMEEARKLDQERGRNKKS-NLYGIPVVVKDNVQTEKVMPT 156 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISP 144 A +++L + ++T+ +KL + GA +LGK NM E+A S + G ++P Sbjct: 157 SAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNP 216 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + + F GSS GS+ VA +IGT+T GSI PA+ VG++P+ G S Sbjct: 217 YGPI----TFDTSGSSSGSATVVAADFAPLAIGTETTGSIVAPATQQSVVGLRPSLGMVS 272 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP---DYERALD-QS 260 R GII A +LD AG + RTV+D+A L + YDE DA + DY + L Sbjct: 273 RSGIIPLAETLDTAGPMARTVKDAATLFNIMVSYDEKDAMTEKMKDKERMDYTKDLSIDG 332 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV-EISLPHTQYALPAYYIISP 319 ++G VG+ + +D + Q+ L+DAGA + +I L Sbjct: 333 LKGKKVGVL--FSIDRQDDNRKEVAQKIRKDLQDAGAILTDDIQL--------------N 376 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENT------RSIGFGQEVKHRIMIGTYVLSSR 373 AE NL + Y + D L +N I F ++ +R + Sbjct: 377 AEGVDNLQT---LEYEFKHNVNDFLSKQKNVPVKSLEEIIAFNKKDSNRRI--------- 424 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE------ENNSGSMG 427 Y + + + K +F + + TS KE E ++ Sbjct: 425 KYGQTLIEGSEKSAITKDEFEKVVQ------------TSQEDARKELDRYLVEKGLDALV 472 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 I ND ++ +AG P ++VPA + P+G+ +G+ F E+ LF++G E+++ Sbjct: 473 MINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQFGEKELFNIGYAYEQQS 528 >gi|296822974|ref|XP_002850371.1| amidase [Arthroderma otae CBS 113480] gi|238837925|gb|EEQ27587.1| amidase [Arthroderma otae CBS 113480] Length = 571 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 105/337 (31%), Positives = 171/337 (50%), Gaps = 31/337 (9%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DL 71 +D L ++V+LV++Y+ I NS + A E+ A A A++ D G R L Sbjct: 74 QDGLTKGCFTSVDLVNTYVARIAEVNSTVRAVTEI-NPDALAIAQQMDDERKKGKVRGPL 132 Query: 72 EGIPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-- 128 G+PI IK+ F + + A S+ L G R ++TV KL G V++GK ++A Sbjct: 133 HGLPIVIKNNIFTDDKMSSTAGSYALFGARTSGDATVASKLRKAGLVIMGKSGASQWANF 192 Query: 129 --MGSSNETSYYGPVISP--WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 S+N S YG ++ +++ D P GSS GS A L A++GT+T GSI Sbjct: 193 RSTNSTNGWSAYGGQVTAAYYKNQD------PSGSSSGSGVASDLGLAFATLGTETSGSI 246 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P+ + VGIKPT G SR ++ + D G + R+V+D+A LL+ IAG D D Sbjct: 247 VGPSDKSNIVGIKPTVGLTSRRFVVPISERQDTVGPMARSVKDAAYLLQVIAGKDPNDNY 306 Query: 245 CVNLP---VPDYERALD-QSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKI 299 +P +P+Y +A + +++G +G+P+ ++ T+ + + ++ +K AGA I Sbjct: 307 TSAIPFDNIPNYVKACNLNALKGKRIGVPRNVIKIFGAERTVVDQFNKALTVMKQAGAII 366 Query: 300 VEISLPHTQYALPAYYIISP-------AEASSNLARY 329 VE +T + A + SP A++ SNL + Sbjct: 367 VE----NTDFTAFAEFARSPIPDDILYADSLSNLPAF 399 >gi|255574730|ref|XP_002528273.1| amidase, putative [Ricinus communis] gi|223532310|gb|EEF34111.1| amidase, putative [Ricinus communis] Length = 510 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 18/299 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN--GDARDLEG 73 + +++ +LV Y+ I NS +N IE+ A + +R +N G L G Sbjct: 41 FKQNQLTSRKLVQFYVGEIRRLNSVLNGLIEINPDALYQADKADYERSVNAPGSLVGLHG 100 Query: 74 IPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 IP+ +KD TK ++T A S L ++ V KL GA++LGK +M E+A S Sbjct: 101 IPVLLKDNIGTKDRLNTTAGSFGLFRSVVRRDAGVVMKLRKTGAIILGKASMTEWAAFRS 160 Query: 133 NE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + ++ G +P+ + S D P GSS G + +VA L A S+GT+T GSI P Sbjct: 161 LKLPNGFSARGGQGKNPY--VLSAD---PCGSSSGPAISVAANLVAVSVGTETDGSILCP 215 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV- 246 ++ VGIKPT G SR G++ + D G I RTV D+ +L AI G D D Sbjct: 216 SNANSVVGIKPTVGLTSRAGVVPVSFRQDTVGPICRTVSDAVYVLDAIVGEDYNDGATKE 275 Query: 247 ---NLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 ++P Y++ L ++G +G+ + L + S +T++ + L+ GA IV+ Sbjct: 276 ASQHIPYGGYKQFLKPYGLKGKRLGVVRNPFLSFASNAESQTFEYHLQTLRQGGAIIVD 334 >gi|329113538|ref|ZP_08242319.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum DM001] gi|326697363|gb|EGE49023.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum DM001] Length = 451 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 135/494 (27%), Positives = 218/494 (44%), Gaps = 83/494 (16%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIIN 65 +A++E+ +RS SAV + + + ++ + + A KA A + D R Sbjct: 8 LAIAEA---IRSGKKSAVSTIQETLNTLRTQDNDIRCVTHIFADKALQQAHKIDAMRQAG 64 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 L G+P G+KD F G T A S +L P ++ + Q+L GA+ + LNM Sbjct: 65 QTLPPLAGVPFGVKDLFDIAGHVTTAGSIVLRNTPPAQKDAAIVQRLKAAGAIPVATLNM 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 DEFA G + ++YG +P + G S G ++A AGFL A +G+DT GSI Sbjct: 125 DEFAYGFATVNAHYGTTHNP----HDLARMAGGSSGGSAAAVAAGFLPFA-LGSDTNGSI 179 Query: 185 RQPASFTGTVGI------KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 R PAS G GI P R G F+ SLD G ++ D + G Sbjct: 180 RIPASLCGVWGIKPTFGRLP------RAGAYPFSASLDVVGSFASSLDDLITTFYVMDG- 232 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 ++P P E A+D + + + LSPT+ + + LK++ Sbjct: 233 --------SIPAP--EPAVDT----LRISRLGGWFASNLSPTLVTALNRVCASLKNSS-- 276 Query: 299 IVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + LP A A ++I+ AE + +L+R LR + ++ + Sbjct: 277 --TVELPEVASARAASFLITAAEGGNLHLSR-------LRKQAEE------------YDP 315 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL- 416 + R++ G + SS YL+A++ R ++ E F Q DV++ PT A PL Sbjct: 316 ATRDRLIAGALLPSST-----YLQAQRFRNWFRQKIHEIF-QKTDVLIAPTVMGEA-PLL 368 Query: 417 --------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 GK + ++G +FT +++ GLP + +P +PLGLQL+ P Sbjct: 369 DEPTIMVDGKPVSARANLG-----LFTQPLSLPGLPVLCLPLK-NTGSLPLGLQLVAAPG 422 Query: 469 REETLFSVGQIIEK 482 +E LFSV + ++K Sbjct: 423 QEAALFSVARALKK 436 >gi|322696005|gb|EFY87804.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Metarhizium acridum CQMa 102] Length = 549 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 27/311 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRII 64 + E R L + ++V+L +YI I +++A E+ ++ AR A +K Sbjct: 40 LDELRHGLDAGLFTSVDLTKAYIARINEVAGELHAVNEINPDALSIAARMDAARKNKTAC 99 Query: 65 NGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + L GIP+ IKD AT ++ A S L G RP +ST+ KL G ++LGK N Sbjct: 100 SRGP--LYGIPVLIKDNIATLDKMNNTAGSFALVGARPKEDSTIAAKLRKAGVIILGKAN 157 Query: 124 MDEFA----MGSSNETSYYGPVI--SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + ++A +SN S YG + +R D P GSS GS + + L A++G Sbjct: 158 LSQWANYRSARTSNGWSAYGGQTKGAYFRDQD------PSGSSSGSGVSSSIGLAWAALG 211 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI P++ VGIKP+ G SR ++ + D G + RTV+D+A LL AIAG Sbjct: 212 TETDGSIISPSNVNNVVGIKPSVGLTSRYLVVPISEHQDTVGPMARTVKDAAYLLSAIAG 271 Query: 238 YDECDATCVNLP----VPDYERAL-DQSIQGMTVGIPKEYR--LDYLSPTIDKTWQQGIS 290 D+ D ++P +PDY A D ++G +G+P+ + + SP + + ++ + Sbjct: 272 ADKNDNYTSSIPFKERLPDYVAACKDDGLRGKRIGVPRSWLPPRQFTSPLL-QAFENALE 330 Query: 291 WLKDAGAKIVE 301 L+ GA +V+ Sbjct: 331 VLRSEGATVVD 341 >gi|226505582|ref|NP_001141439.1| hypothetical protein LOC100273549 [Zea mays] gi|194704580|gb|ACF86374.1| unknown [Zea mays] Length = 353 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 108/384 (28%), Positives = 176/384 (45%), Gaps = 61/384 (15%) Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M E G+S ++G +P+ + SS GS+A V LC ++G D GGS Sbjct: 1 MHELGAGTSGINPHHGSTRNPYNASTIAGG-----SSSGSAAIVCAGLCPVALGVDGGGS 55 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA+ G VG KPT GR S G++ ++ GI+ TV D+ I AI Sbjct: 56 VRMPAALCGVVGFKPTAGRLSNAGVLPLNWTVGMPGILAGTVEDALIAYSAI-------- 107 Query: 244 TCVNLPVPDYERA---LDQSIQGMTVGIPKEYRL--------DYLSPTIDKTWQQGISWL 292 V+ P Y R L Q +++G K R + + DK Q + Sbjct: 108 --VDQSQPSYLRPELNLPQLGSTLSIGNIKLARYGKWFNDSAEDIRSCCDKALQ---ALR 162 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 + G + V++++P + A+Y+ +E +++LA+Y D L+ E Sbjct: 163 ANYGWQTVDVTIPEVEEMRLAHYVTIGSECTTSLAKY-----------LDKLKRSE---- 207 Query: 353 IGFGQEVKHRIMIGTY-VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 IG+ R+ + Y SSR Y ++ LR R++ F + + DVI++P T Sbjct: 208 IGW----DARVALSVYGSFSSRAYLNAQRLRNRQMY------FHKQIFKAADVIVSPMTG 257 Query: 411 TSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +A+PL + ++G + +I +++A N GLPAI+V +P+GLQ IG+P Sbjct: 258 VTAYPLQDDALSTGELDYINGAALVRYSIAGNFLGLPAITVTVGYDRGGLPIGLQFIGRP 317 Query: 468 FREETLFSVGQIIEKEA--GYFRP 489 + E TL V ++ GY +P Sbjct: 318 WAEATLLHVAFATQQACAKGYKKP 341 >gi|195572655|ref|XP_002104311.1| GD18512 [Drosophila simulans] gi|194200238|gb|EDX13814.1| GD18512 [Drosophila simulans] Length = 536 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 143/525 (27%), Positives = 227/525 (43%), Gaps = 75/525 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++V E R RL+S+ +++VELV +YI+ IE N +NA +E A A E+D Sbjct: 42 SRLLTLSVQELRRRLQSRQLTSVELVRTYIERIEAVNKHLNALVESRFTAALEEATETDD 101 Query: 62 RIING----------DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 I + + R L G+P+ IK+ A +G+ S + + ++L Sbjct: 102 LIASCQTAADVEKLFEERPLLGLPVTIKESCALEGMTFAVGSLSRKNIKAQADGEAVKRL 161 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS------GGSSA 165 GA+ L E+ ET G ++P+ S + TPGGSS G+ A Sbjct: 162 KSAGAIPLLVSATPEYCFSIETETLLNGRCLNPYDS-----ERTPGGSSGGEGSLNGAGA 216 Query: 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-------A 218 ++ G IG+D GGSIR P+ + G G KP+ G S G F SLD Sbjct: 217 SLFG------IGSDIGGSIRIPSLYCGIFGHKPSGGVVSVKG--HFPNSLDPNIGHYLVE 268 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 G ITR D + LL+ +AG + + PV L+Q +G E ++ Sbjct: 269 GPITRFAEDLSELLQVMAGKENASKLRLKEPV-----QLNQIKVQYALGF--EGINGWMH 321 Query: 279 PTIDKTWQQGI----SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 +DK + I + LK G + + LP+ + ++ A S +A D + Y Sbjct: 322 SAVDKDIRGAICKATTHLKTLGLDVKKARLPNLENSMEM--------ALSGIAGQDLMDY 373 Query: 335 GLRVE-----GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 L E GK ++E +S+ E +I + L R ++ KI + Sbjct: 374 LLADENPEGSGKVRETVWEIVKSVRGHSEYTTNALI--FELMRRT--GAFMSQSKINQYM 429 Query: 390 K--RDFTEAFEQ--GVD-VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 R+ FE G D V+L PT A + S+ ++ +T+ N+ GLP Sbjct: 430 NETRELIGEFENLLGDDGVLLFPTLNLPA------PRHKWSLLSLWGVDYTLMFNVLGLP 483 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VP L E+ +P+GL +IG P ++ V +E+ G ++P Sbjct: 484 VTHVPMGLNERGLPIGLSVIGAPNQDRLCLRVAVELERAFGGWKP 528 >gi|240137841|ref|YP_002962313.1| putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Methylobacterium extorquens AM1] gi|240007810|gb|ACS39036.1| putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Methylobacterium extorquens AM1] Length = 524 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 131/492 (26%), Positives = 202/492 (41%), Gaps = 60/492 (12%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 IE N + A I + Q A +R + L G+P+ IKD G+ + Sbjct: 50 IETYNPRYKALIVMNPQALDDARAIDARRAAGEELGPLAGVPVVIKDTMDMAGLPSTGGW 109 Query: 94 HILDG------FRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWR 146 H L P ++ VT ++ + G V+LGK N+ + GS S+ GP ++P Sbjct: 110 HFLSAEAGGVDLIPATDAPVTARMREAGCVILGKTNVPVLSHTGSHANDSWAGPTLNP-- 167 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 + D+ PGGSS G++ AVA L + +TGGSI+ PAS G VGIKP++G Sbjct: 168 --AAPDRI-PGGSSAGTATAVAASLAILGLAEETGGSIQNPASAQGLVGIKPSFGLVPNA 224 Query: 207 GIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPVPDYERALDQ-S 260 G++ A S D G I R VRD+A+ L A+AGY D V P Y LD + Sbjct: 225 GVMPLAGSTRDVVGPIARCVRDAALTLDALAGYSSADPKTVAGIGKRPEAGYAAGLDTGA 284 Query: 261 IQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 + G +G+ +R LS + + L+ AGA +V T +A + Sbjct: 285 LAGKRLGLYGPGWRDLPLSEEASALYARTQKELEAAGATLVADPFAGTGFA-------AI 337 Query: 320 AEASSNLARYDG--------------VRYGLRVEGKDILEMYENTRS-IGFGQEVKHRIM 364 AE + L +D R G V + E T++ F + Sbjct: 338 AEPTPGLVYFDARGFESAPYDLQLYLERMGPDVAIRSFAAFAEATKAEDAFAPGGVLHPI 397 Query: 365 IGTYVLSSRCYD-------SHYLRARKI-RTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 L+ D S +L AR+ L R E G+D ++ P PL Sbjct: 398 TNLPGLAPCLADPASPPDLSDFLAAREAYLALFDRVMA---EHGLDALVFPQMRAELPPL 454 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + G++ + +N+AGLP +++PA P L +G+ + E L + Sbjct: 455 ----HGPGTL----LETTVCEINIAGLPGVTLPAGAYASGSPFNLIFVGRMWSEGDLLAY 506 Query: 477 GQIIEKEAGYFR 488 E+ + R Sbjct: 507 AYAYEQATHHRR 518 >gi|7576174|emb|CAB87925.1| putative amidase [Arabidopsis thaliana] Length = 657 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 12/270 (4%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + ++++ I++ ELV Y++ ++ N + A + + A A+E+D Sbjct: 197 DIAFMSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDL 256 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S E+ V ++L +GAV++ K Sbjct: 257 LSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAK 316 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 317 LVTGSMAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 368 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+ PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D Sbjct: 369 GSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPD 428 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE 271 D + + +E I +TVG K+ Sbjct: 429 DLSSREIA---FEDPFSVDITKLTVGYTKD 455 >gi|52842565|ref|YP_096364.1| amidase (enantiomer selective) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629676|gb|AAU28417.1| amidase (enantiomer selective) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 469 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 133/531 (25%), Positives = 221/531 (41%), Gaps = 112/531 (21%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIE-VVAQKARAAAEES 59 M ++ ++ +E R++ K++SA E++ +++ I+ N +NA E + ++ A+E Sbjct: 1 MDAIHLLSATEIIRRIKMKELSAAEVMVAHLNHIDKINPVINALTERIPPEECLKQAKEI 60 Query: 60 DKRIING-DARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 DK I + + L G+P+ IKD KG I + ACS G + ++T+ +L GA+ Sbjct: 61 DKSISSKKNLNKLMGLPVAIKDALYVKGLICSSACSGFYKGEKAVRDATLVSRLKKEGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LG N+ E G ++ YG +P+ T GGSSGGS+A +A ++G Sbjct: 121 ILGLTNVPELCRGGDSDNLIYGRTNNPYDLAR-----TSGGSSGGSAALIAAGGVPFALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG------------IISFAPSLDQAGIITRTV 225 +D GGS+ QPA G V +KPT+G G +ISF P + R+V Sbjct: 176 SDGGGSLMQPAHCCGIVALKPTHGHLPHTGSVGGDSYGLIGNLISFGP-------MARSV 228 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERA-----------------LDQSIQGMT--- 265 D + L +AG D+ D PVP A +D IQ + Sbjct: 229 SDLRLGLSVLAGSDQYDP--YTNPVPVMPAAPLKKLRVAYFTENGFTPVDAEIQNVVKSA 286 Query: 266 -------VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 V I +E R D +S D W+ + + AG K + L Sbjct: 287 ALALQDDVAIVREVRPDCVSKAFDLHWELFLGGDRGAGFKTMLSEL-------------- 332 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 GV L E ++ L E T+ F H+ Sbjct: 333 ------------GVN-NLSWELQEFLRQAEQTQ---FSVTQLHQ---------------- 360 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 R R+I R F Q DV+++P PT A P G + I + + + Sbjct: 361 --RMREIDLF--RLELALFMQDYDVLISPVFPTVAKPHGI------GIKEISDFSYAMTH 410 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 N++G P IS+ + +P+ + + +++ T +V + +E+ G ++P Sbjct: 411 NLSGFPTISLRCGTSAEGLPINVLIAANRWKDTTSLAVAERVEQLMGGYKP 461 >gi|184155651|ref|YP_001843991.1| putative amidase [Lactobacillus fermentum IFO 3956] gi|183226995|dbj|BAG27511.1| putative amidase [Lactobacillus fermentum IFO 3956] Length = 492 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 70/516 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 ++L ++ +E +R +SA ELV + + I+ N +NA V++ + +AA E+D+ Sbjct: 6 TDLLSLSGTEMAQAVREGKVSATELVSASLAKIKEENPALNA---VISLREKAALNEADQ 62 Query: 62 RIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 I G + G+P +K T +G+ + + G S + L + G ++ G Sbjct: 63 LIDRG--QPFLGVPFLLKGLGQTFRGLPATNGNRLFQGQVAQSSSNFARALTNAGFIVPG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N EF + ++ YG +PW + PGGSSGG+ AAVA + + +D Sbjct: 121 QTNYPEFGFKNITDSKMYGDAHNPWNL-----AYYPGGSSGGAGAAVASKMVPIAGASDG 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG--IITRTVRDSAILLKAIAGY 238 GGSIR PAS+T T+G+KPT GR G + AG IT+ V D+A LL + Sbjct: 176 GGSIRIPASWTSTIGLKPTRGRVIT-GPSDWRSWQGAAGSFAITKDVEDTARLLDVLQAL 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGA 297 V L P + L Q+++ + VG E + + P Q ++L+ G Sbjct: 235 QPAAVFQVPLQKPSFADLLKQTVKPVRVGFTTESPVGTPVDPEAVAAVHQAATFLEQNGF 294 Query: 298 KIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILE-----MYENT 350 ++ EI +P AL +YY+++ E + A +D V L R D +E +Y Sbjct: 295 EVEEIEVPTDGRALIDSYYLMNEGETA---AMFDQVEASLGRAVTVDDMEPLTWALYRTG 351 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R I TY + +D ++ TL + ++LTPTT Sbjct: 352 RHIS----------AATYSNALAAWDQA---GYQMATL---------HEAYPLVLTPTTA 389 Query: 411 TSAFPLGKEENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAIS 447 +A + + + + + + FT N+ G PAIS Sbjct: 390 MTAPRIDQTMVSEAQLDQMRDIDALTPAAQQRFIFDQWLPSLTRSPFTQQANLTGEPAIS 449 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +P L + +PLG+QL+ +E L V ++ E + Sbjct: 450 LPTHLTKAGLPLGIQLVAGKGQEGLLLQVAKLFETQ 485 >gi|324505461|gb|ADY42347.1| Fatty-acid amide hydrolase 2 [Ascaris suum] Length = 698 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 123/531 (23%), Positives = 222/531 (41%), Gaps = 97/531 (18%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L M+ +++ +R + I+++EL+++YI IE N +NA E AR A E+D + Sbjct: 216 LLLMSATKAAKMIRERKITSIELIEAYINRIEQVNGAINAIAEDNFADARQKAHEADAIL 275 Query: 64 INGD-----------ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 + + A+ L G+P +KDC G+ + ++TV +++ Sbjct: 276 ESIEREGEEYTKLIAAKPLLGVPFTVKDCIEAAGLRCTVGLASRKDVKAVEDATVIRRMK 335 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 + GA++L N+ E M + + YG V +P+ + + + G + S+ C Sbjct: 336 NAGAILLAVTNVPEVCMWWESSNTIYGRVSNPYDTRRTAGGSSGGEGALISA-------C 388 Query: 173 AASIG--TDTGGSIRQPASFTGTVGIKPTYGRCSRLG----IISFAPSLDQAGIITRTVR 226 + IG +D GGSIR P+ F G G KPT G G + + + + G I R Sbjct: 389 GSVIGLASDIGGSIRMPSFFNGVFGFKPTPGVVPLSGHQPQVEGYMTEMLRIGPICRYAE 448 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS----PTID 282 D ++LK +A D +NL LD+S+ ++ R+ Y+S P ++ Sbjct: 449 DLELILKVLAADDS-----INL------LQLDRSVNLHSI------RVFYMSGLKTPFVE 491 Query: 283 KTWQQGISWLKDAGAKI--------VEISLPHTQYALPAYY-------IISPAEASSNL- 326 + S LK A + + LP AL Y+ + P A + L Sbjct: 492 ALSTECHSALKMAVEHFERKYDLCAIRLDLPFVHKALDFYFASMEVPGVAPPIHAMTELD 551 Query: 327 ----ARYDGVRYGLRVEGKDI----LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 ++ ++ L + + + ++EN R++ F +E K I+ Sbjct: 552 SDVDCAFELAKFVLGLSSHTLAAITMAVFEN-RTL-FSEERKRTIIAQ------------ 597 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 R + R+ E Q ++L P+ PT P + + +N +T Sbjct: 598 -------RDRLHRELNELL-QANGILLFPSFPT-LVPFHNQ-----PLLTPFNFAYTSLW 643 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 N LP + P L +P+G+Q+IG P + L +V + +E+ G ++P Sbjct: 644 NALALPVVQCPLGLSRHSLPIGVQVIGAPASDRLLIAVARDLEQAFGGWKP 694 >gi|17537465|ref|NP_497103.1| hypothetical protein Y53F4B.18 [Caenorhabditis elegans] gi|6434539|emb|CAB61089.1| C. elegans protein Y53F4B.18, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 535 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 120/503 (23%), Positives = 220/503 (43%), Gaps = 52/503 (10%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ +++ + K+IS+ LV+SYI IE N+ +NA + + + AR A E D I Sbjct: 50 LLLISATQAVQMISQKEISSTALVESYIHRIEQVNNTINAVVVKLFESAREQANEVDSFI 109 Query: 64 INGDARDLE---------GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 D D++ G+P +KD + + + ++L Sbjct: 110 ALADEDDIKKKLEEKPLYGVPFTMKDALEVENEIITCGVFNRKSTKCDRTAEAIKRLQAA 169 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G ++L N+ E M + + YG +P+ + T GGSSGG A + Sbjct: 170 GGILLAITNVPEVCMWVESVNTIYGRSKNPYDARRMT-----GGSSGGEGALLGSGGSVI 224 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII----SFAPSLDQAGIITRTVRDSAI 230 +G+D GGSIR PA F G G+KPT G +G + + + + G + R D + Sbjct: 225 GVGSDIGGSIRMPAFFNGVFGLKPTPGVIPLIGHVPEPTGYKTHMLRIGPMCRFAEDLPL 284 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALD----QSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 +L+ +AG +A +NL P + L + I G + P E + Y + Sbjct: 285 MLRIMAGE---NAQSLNLHEPVSGKKLRVFYMEGITGSPIIQPLEDEMRY-------ALK 334 Query: 287 QGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASSNLA--RYDGVRYGLRVEGKDI 343 + + +L+ + + I LP ++A+ ++ +S E +++ A + G + E Sbjct: 335 KAVRFLERKYDIVAQGIELPSAKHAM-EFFTLSMHEDTTDPAFNKLMLCTKGTKGEVNCF 393 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ---G 400 E+++ G I+ G ++ SR D + A L KRD + + G Sbjct: 394 TEIFKYMA--GNSNHTLSGIVAG--IIDSR--DPPFSEAHTKNLLYKRDRLKRQVKELLG 447 Query: 401 VD-VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 D ++L P+ P +A +N + +N +T N+ +P + P L + +PL Sbjct: 448 TDGILLFPSWPCTAM-----YHNEPILAP-FNFCYTALWNVLSVPVVQCPLGLDSRGLPL 501 Query: 460 GLQLIGQPFREETLFSVGQIIEK 482 G+Q+IG + + L ++ Q++E+ Sbjct: 502 GVQVIGNQYTDRNLIAIAQVLEE 524 >gi|322692513|gb|EFY84419.1| amidase [Metarhizium acridum CQMa 102] Length = 614 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 122/457 (26%), Positives = 200/457 (43%), Gaps = 77/457 (16%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDG--FRPHYEST-VTQKLWDNGAVMLGKLNMDE 126 L+G+PIG+KD KG ++ + D F+ +S Q L D GAV+LGK M E Sbjct: 176 LDGVPIGVKDDVNVKGYVNHNGMKYNADSPFFKRQEKSAWCVQALQDAGAVVLGKNRMHE 235 Query: 127 FAMGSSNETSYYGPVI-----SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + +I SP +++ ++ PGGSS G ++AV + S+ TD G Sbjct: 236 LGSDTCGLNQLTPHIIQVAQGSPTNHLNT--EYYPGGSSSGPASAVCAGVVPFSVATDAG 293 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PASF G G+K ++ R +G ++ G I V D I + ++ + Sbjct: 294 GSIRIPASFNGLYGLKTSHHRTGYMGS-----TMCITGPIAANVADLTIAYRLMSQPNPD 348 Query: 242 DATC-----VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDA 295 D T P P +R + G+ +E+ L+ P + + + + + K+ Sbjct: 349 DGTQGVFGRSTPPQPSAKRVM---------GVYREW-LNAADPEVIEHCNKALDYFAKER 398 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G +IV+ISLPH A A+ +I E + R V D L + Sbjct: 399 GYEIVDISLPHLADAQLAHGMICITEMAEAARRR-------TVNPADWLSLVGPV----- 446 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSA 413 +R+++ + + + +L+ +RT++ R F F + G+ +I++PTTP + Sbjct: 447 -----NRLLM---TVGQQTPAADFLKFNTMRTILMRHFAFLFRKYPGL-LIMSPTTPLNG 497 Query: 414 FP-------LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-----EKKMPLGL 461 +P LG + N+ N ++ NM G P++SVP E K+P+GL Sbjct: 498 WPKHPGDEALGMNDANT----TFRNMMYIFLANMTGTPSVSVPVGYAAPKQGEGKIPVGL 553 Query: 462 QLIGQPFREETLFSVGQIIEK------EAGYFRPHKW 492 G+ EE L + E+ E G RP W Sbjct: 554 MATGEWGSEEQLLAFAGEAEEYLHEVYEEGRRRPSTW 590 >gi|188586560|ref|YP_001918105.1| Amidase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351247|gb|ACB85517.1| Amidase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 488 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 142/501 (28%), Positives = 226/501 (45%), Gaps = 68/501 (13%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E +D + +I++ +LV Y I ++ ++N+ IE+ + + A +R Sbjct: 19 VDELQDYMEKGEITSRDLVLMYQNRIACLDQDGPKINSIIEMNPEALQIAQALDRERKYK 78 Query: 66 GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L GIP+ +KD T+ + T A S L+ ++ + +KL GAV+LGK N+ Sbjct: 79 GPRSKLHGIPVLLKDNIDTEDKMRTSAGSIALEEHVAREDAFIVKKLRQAGAVILGKANL 138 Query: 125 DEFA--MGSSNETSYY---GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A M + Y G V++P+ + GGSS GS+AA+A +IGT+ Sbjct: 139 TEWANFMADNMPNGYSSRGGQVLNPY----GPGELDCGGSSSGSAAALAANFTVLAIGTE 194 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS VGIKPT G SR GII + S D AG + RTV D+AILL+ ++G D Sbjct: 195 TSGSILSPASDNSVVGIKPTVGLWSRSGIIPISHSQDTAGPMARTVEDAAILLEILSGPD 254 Query: 240 ECDATCVNLPVPD-----YERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D V L D Y L+ ++G +G+ +E+ L+ L + ++ I L+ Sbjct: 255 AKDP--VTLTKKDDIDGRYTNYLNAHGLKGTRLGVSQEF-LNLLEDSELDVIEKAIKNLE 311 Query: 294 DAGAKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM----YE 348 + GA IV I+ P + ++ + N + G RV K + E+ Y Sbjct: 312 NLGAHIVSGITYP-PKIDWDLNVLLHEFKVGINTYLRNT---GDRVPVKSLTELINFNYR 367 Query: 349 NTR-SIGFGQE--VKHRIMIGTYV----LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 N ++ +GQE +K GT L SR +D Y + + I +++ E + Sbjct: 368 NKEIALKYGQERLLKSNKTKGTLTEPEYLKSREHDLFYSKDKGIDAVME-------EYNL 420 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 D ++ P + P AG P+I+VPA P+GL Sbjct: 421 DALIFPANLGANIPA-----------------------RAGYPSITVPAGYNSTGKPIGL 457 Query: 462 QLIGQPFREETLFSVGQIIEK 482 + + E L + E+ Sbjct: 458 TFTAKAYEEGKLIKIAYSYEQ 478 >gi|328542215|ref|YP_004302324.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [polymorphum gilvum SL003B-26A1] gi|326411965|gb|ADZ69028.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Polymorphum gilvum SL003B-26A1] Length = 455 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 131/464 (28%), Positives = 209/464 (45%), Gaps = 63/464 (13%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESDKRIINGD 67 RDRL S + A EL + I + ++ A+ V+A+ AR A + R I Sbjct: 21 RDRLASGAVRAGELARACISRVAEREGEVQAWAWLDEEHVMAEAARLDALRTSGRPIG-- 78 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L G+P+ +KD T I T+ + + G P ++TV ++L GA+++GK E Sbjct: 79 --PLHGLPVALKDVIDTARIPTENGTALDAGRVPVEDATVVRRLKAAGALIMGKTVTAEL 136 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDK-FTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 A + P ++ + D TPGGSS GS+AAVA + ++GT TGGS+ + Sbjct: 137 AF------------LHPGKTRNPHDPGHTPGGSSSGSAAAVAAGMVPLALGTQTGGSVIR 184 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA++ G VG KP++G R GI+ +P+LD G+ +V +A+L + + D D + Sbjct: 185 PAAYCGIVGFKPSFGAIPRTGILQQSPTLDTVGVFATSVEAAALLAETLFCDDPADRSTR 244 Query: 247 NLPVPD-YERALDQSIQGMTVGIPKEYRLDYLSPTIDK--TWQQGISWLKDAGAKIVEIS 303 P P + AL ++ T+ + + +D L P D + + L +AG EI+ Sbjct: 245 PTPPPRLLDTALARAPVRPTLALLPKLPVDPL-PDQDTAGAFAELSGLLGEAG---FEIA 300 Query: 304 LPHT-QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 LP AL II N A Y G+D L E +I G+ + R Sbjct: 301 LPPMFGDALRQREII-------NFAEMAKCYYSYERRGRDALS-EETLAAIDAGKAIPAR 352 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 YL A ++ E F++ D I P+TP +A P G Sbjct: 353 ---------------DYLSALDWPGILNSALDEIFDR-CDAIAMPSTPGAA-PKGLASTG 395 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + +N ++T + G P +++P +P+GLQLIG+ Sbjct: 396 PSA----FNGLWT----LCGTPVVTLPLFAAPNGLPMGLQLIGR 431 >gi|209522246|ref|ZP_03270880.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia sp. H160] gi|209497324|gb|EDZ97545.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia sp. H160] Length = 165 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 87/138 (63%), Gaps = 1/138 (0%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ +NS +NA+I+V + A A+ +D + G Sbjct: 5 SLTELRAALAAKECSAVELAQMYLKRIDAANS-LNAFIQVDPELTLAQAKAADALLHTGH 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F TKG + A S +L + +++TV +L G V +GK NMDEF Sbjct: 64 AGPLVGLPIAHKDVFVTKGWRSTAGSKMLANYESPFDATVVARLQKAGMVCVGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPW 145 AMGSSNE SY+G V +PW Sbjct: 124 AMGSSNENSYFGAVQNPW 141 >gi|115375236|ref|ZP_01462502.1| 6-aminohexanoate-cyclic-dimer hydrolase [Stigmatella aurantiaca DW4/3-1] gi|310818933|ref|YP_003951291.1| amidase family protein [Stigmatella aurantiaca DW4/3-1] gi|115367798|gb|EAU66767.1| 6-aminohexanoate-cyclic-dimer hydrolase [Stigmatella aurantiaca DW4/3-1] gi|309392005|gb|ADO69464.1| Amidase family protein [Stigmatella aurantiaca DW4/3-1] Length = 482 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 218/492 (44%), Gaps = 52/492 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ K++SA ELV + +AIE +N +NA I + +A+A + + +G G+P Sbjct: 18 VQRKEVSAAELVQTAFKAIEVTNPALNAVIATLEDEAQATLA---RGLPDGP---FTGVP 71 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD I + + G +++ + + G V++G+ N E + ++ E Sbjct: 72 FLIKDLGLHAAHIPSSQGTRTFKGLAFPHDTALMARYRRAGLVLVGRTNAPELGLSNATE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +GP +PW KF+PGGSSGGS+AAV+ + + G D GGSIR PAS G Sbjct: 132 PLAWGPTRNPWNL-----KFSPGGSSGGSAAAVSSGMVPMAYGNDGGGSIRMPASMCGLF 186 Query: 195 GIKPTYGRCSRLGIISFAPS----LDQAG---IITRTVRDSAILLKAIAGYDECDATCVN 247 G+KPT GR I+ P L+ G ++TR+VRDSA +L A AG D + Sbjct: 187 GLKPTRGR------ITSGPDSGELLNGFGVEHVLTRSVRDSAAMLDASAGPLAGDPYLIP 240 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P + + + + + + ++ D +SP + + G ++VE S P Sbjct: 241 PPERSFLEECLREPRRLRIAVCRKAPAGDPVSPECLTALDEAVRLCATLGHELVEASPPF 300 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 L + + A G GL G L + R+ E R+ G Sbjct: 301 QGSLLENITVTLWSTA------MVGWMDGLAALGGITLREADFERTSWAALEHGRRV-TG 353 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS- 425 V ++ + + R +F + D++LTPT A PLG + N+ Sbjct: 354 AEVQAALAKLNQFSRGMG-----------SFFEDYDLLLTPTFALPALPLGLLDANAPVS 402 Query: 426 ----MGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 M +Y+ FT N G PA+SVP + + +PLG +G+ E TLF + + Sbjct: 403 FPQWMRRLYSFCPFTTQANATGQPAMSVPLSWSAEGLPLGAHFVGRWGEEATLFRLAGQL 462 Query: 481 EKEAGYFRPHKW 492 E+ + H+W Sbjct: 463 ERAQPW--AHRW 472 >gi|149916148|ref|ZP_01904670.1| hypothetical protein RAZWK3B_10832 [Roseobacter sp. AzwK-3b] gi|149810003|gb|EDM69852.1| hypothetical protein RAZWK3B_10832 [Roseobacter sp. AzwK-3b] Length = 450 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 137/294 (46%), Gaps = 20/294 (6%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 LRS + V L + +E + YIE +A A AE S R +G A L+G+ Sbjct: 13 LRSGKLDPVALTEEVYDRLEQ-HGDTAIYIETTRDRAMAEAEASRLRFKSGLPAGPLDGV 71 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ KD F KG T A + + P ++ V G + G +NM EFA Sbjct: 72 PVAWKDLFDLKGRVTTAGAIVTRTDTPAKADAPVIATAHRAGMISTGTVNMTEFAFSGIG 131 Query: 134 ETSYYGPVISPWRSMDST-DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +P T + +PGGSS GS V+ + SIGTDTGGS+R PASF G Sbjct: 132 LNPHYG---TPRNVHAPTGQRRSPGGSSSGSGVVVSAGIVPISIGTDTGGSVRIPASFNG 188 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG K + GR G+ A SLD G + TV D A+ + G D +A + Sbjct: 189 VVGYKTSSGRYPMDGVYPLAKSLDTIGPLAHTVADCALFDAVLRGKDTPEAQPAD----- 243 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 + G++ IP E LD L+P++ + + L+ AGA+I ISLP Sbjct: 244 --------VDGLSFIIPDEIFLDGLAPSVAANFNATVDRLETAGARIKRISLPE 289 >gi|329927040|ref|ZP_08281427.1| putative peptide amidase [Paenibacillus sp. HGF5] gi|328938751|gb|EGG35128.1| putative peptide amidase [Paenibacillus sp. HGF5] Length = 525 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 122/471 (25%), Positives = 199/471 (42%), Gaps = 41/471 (8%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 E+V +Y+ I S NA+ + A + A E +R L G+PI IK+ Sbjct: 57 EVVKAYLDRIGIYESNYNAFTMMNAGALQEAREVDRRRSAGEKLGPLAGVPIVIKEAVDV 116 Query: 85 KGIHTQ----ACSHILDGFR--PHYESTVTQKLWDNGAVMLGKLNMDEFAM-GSSNETSY 137 G + S L G P ++ V +L GA++LGK N+ F+ G+ +S+ Sbjct: 117 AGFPSTFGWAPLSKELGGIELIPEKDAPVVARLKAAGAIILGKTNIPAFSSDGTRASSSW 176 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G + ++D K PG SS G++ +++G I +TGGSI+ PA+ VGIK Sbjct: 177 AG---DTYNAIDR--KLVPGASSSGTAMSISGNFAVLGIAEETGGSIQNPAAAQALVGIK 231 Query: 198 PTYGRCSRLGIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPVPD 252 PT+G G++ A S D G RTV D+A++L IAGY DA V N+P Sbjct: 232 PTFGLVPNAGVVPLAGSTRDVVGPHARTVHDAAVMLDVIAGYTAEDAKTVASIGNIPKKG 291 Query: 253 YERALDQ-SIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y L+ +++ +G+ L + L+ K + + + L+ GA +V T++ Sbjct: 292 YTSKLNPLALKNKRIGLYGPGWLGEELTAETQKLYDRAVKELESQGAIVVTDPFADTEF- 350 Query: 311 LPAYYIISPAEASSNLARYDGVRY----GLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 A + S YD +Y G + + E+ E T E + Sbjct: 351 --AEFAKSSGSIGIESIVYDMEQYLKRLGPNAAIQSVDELIEKT------GETPSALARY 402 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGS 425 LS+ IRT F + +Q +D ++ P PL E+ Sbjct: 403 PEALSNPGAVPDLSTFTDIRTKYLHIFNDVLDQHKLDALVFPQMYKET-PLLHSEDK--- 458 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 D +N+AG+P ++VPA + P + +G+ + E L + Sbjct: 459 ----IADTTVPEINIAGVPLVTVPAGYYKSGSPFSIAFVGKMWSEADLLGM 505 >gi|297602185|ref|NP_001052188.2| Os04g0184100 [Oryza sativa Japonica Group] gi|255675189|dbj|BAF14102.2| Os04g0184100 [Oryza sativa Japonica Group] Length = 524 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 141/295 (47%), Gaps = 22/295 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N ++A IEV AA D+R L G+P+ +KD Sbjct: 61 LTSTALVRFYLDQITRLNPLLHAVIEVNPDALAQAARADDERATGRRCGPLHGVPVLLKD 120 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK ++ E+ S Y Sbjct: 121 NIATRDRLNTTAGSFALLGSVVPRDAGVAARLRAAGAVILGKASLTEW--------SAYR 172 Query: 140 PVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W + FTP GSS GS+ A A + A ++GT+T GSI PAS Sbjct: 173 PAPNGWSARGGQTLNPYVRSFTPCGSSSGSAVAAAANMAAVTLGTETDGSILCPASLNSV 232 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G++ +P D G I RTV D+ +L AI GYD DA + Sbjct: 233 VGIKPTVGLTSRAGVVPISPRQDSVGPICRTVSDAVHVLDAIVGYDALDAEATGAASKYI 292 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P Y + L +G +GIP + + + +Q+ I ++ GA ++E Sbjct: 293 PNGGYGQFLRMDGFKGKRIGIPNGFFTQEIFEKKQLRAYQKHIQLMRKHGAMVIE 347 >gi|317122650|ref|YP_004102653.1| amidase [Thermaerobacter marianensis DSM 12885] gi|315592630|gb|ADU51926.1| Amidase [Thermaerobacter marianensis DSM 12885] Length = 527 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 149/538 (27%), Positives = 225/538 (41%), Gaps = 101/538 (18%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI--INGDARDLE- 72 +R++ + AVE+ ++ I+ IE NS +NA + + ++ AA D R+ ++G E Sbjct: 18 VRTRQVKAVEVAEAAIRRIETVNSTLNAVVVPLFEQGLEAARAVDDRLATVSGPRHPWEP 77 Query: 73 --------------------GIPIGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKL 111 G+P +KD A G S GF P Y++ ++ Sbjct: 78 GQADASAAGAAESGGLGPFAGVPFLVKDLGEALAGAPLTHGSRAYAGFVPDYDAETVRRY 137 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 G V+LGK N E + + E YGP +PW D + TPGGSSGGS+AAVA + Sbjct: 138 KAAGLVILGKTNTPELGLVAFTEPELYGPCRNPW---DLSR--TPGGSSGGSAAAVAAGM 192 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-------GIITRT 224 + G D GGS+R PAS G G K + GR P Q G++TR+ Sbjct: 193 VPLASGGDGGGSLRIPASHCGLFGFKASRGRTPT------GPDFGQMWHGAAVYGVLTRS 246 Query: 225 VRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT 284 VRDSA +L +A + V P Y L Q + + + +D SP Sbjct: 247 VRDSAAILDLLAAPEPGAPYVVAPPRRSYLDELGQDPEPLRIA------MDTRSPIGRPV 300 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG-----VRYGLRVE 339 + I ++ A A+++E H + A PA I A A S L Y G VR + Sbjct: 301 DPECIHAVERA-ARLLEELGHHVEEARPA--IDGLALARSYLTMYCGVVAAEVRRVRELR 357 Query: 340 GKDILEMYE-NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 G + ++ E TR +G E I G + SR + AR + +R Sbjct: 358 GPEAVKRLEPATRMLGLLGET---ISAGEF---SRALEQWDQAARALGRFFQR------- 404 Query: 399 QGVDVILTPTTPTSAFPLG------------KEENNSGSM--GHIYNDV----------- 433 D+ +TPT +G K N+ G + G IY Sbjct: 405 --WDLYMTPTVARPPVTIGELKPSPAQERLMKVLNSLGPLGSGRIYRAAGILEKVALDNL 462 Query: 434 ----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 FT N+AG+PA+SVP + +P+G+Q + E+ LF + +E+ A +F Sbjct: 463 AATPFTQLANLAGVPAMSVPLHWTAQGLPIGVQFMAPFGGEDVLFRLAGQLERAAPWF 520 >gi|262277876|ref|ZP_06055669.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [alpha proteobacterium HIMB114] gi|262224979|gb|EEY75438.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) [alpha proteobacterium HIMB114] Length = 446 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 136/251 (54%), Gaps = 20/251 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAY----IEVVAQKARAAA 56 M +L F++ +E L+S D+ + +++ S+ I + A+ + + KA + Sbjct: 1 MKDLCFLSATEIAKGLQSGDLKSEQVLASFANRIVEFEETVKAWEHFDKDFILHKA---S 57 Query: 57 EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 E D + I L G+PIG+KD F T + T+ ++++ G +++V L ++GA Sbjct: 58 EADDYKNIGRPIGPLHGLPIGVKDIFGTNDMPTRCGTNLVSGVHTKNDASVVSFLRNSGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAAS 175 +++GK EFA P ++ + D + TPGGSS GS+AAVA ++C + Sbjct: 118 LIMGKTVTTEFAY------------FDPGKTTNPHDEQRTPGGSSSGSAAAVASYMCPVA 165 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IG+ T GS+ +PAS+ G +G KPTYG SR G++ + LDQ G+ R + D A++ K I Sbjct: 166 IGSQTNGSVLRPASYCGVIGYKPTYGLVSRNGVLKQSHLLDQVGVFARHIEDIALITKEI 225 Query: 236 AGYDECDATCV 246 +D D++ + Sbjct: 226 VRHDSNDSSTI 236 Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 11/110 (10%) Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV 436 S Y+ A + R + F E F Q +LTP T T P ++ S I+ Sbjct: 343 SEYVEACENRNYFYKLFQETF-QDYHAVLTPAT-TGVAPKTLKQTGSPEFCTIWT----- 395 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ-IIEKEAG 485 G+PA+S+P E MPLG+Q++G+ F + L +I K G Sbjct: 396 ---YLGMPALSLPLLEGENGMPLGIQIVGEKFDDSRLLRTSNWLINKVKG 442 >gi|225427948|ref|XP_002276506.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 515 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 131/501 (26%), Positives = 212/501 (42%), Gaps = 71/501 (14%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA--AEESDKRIINGDARDLEGIPIGI 78 +++ +LV+ Y+ I N + IEV A A+ K + G L GIPI + Sbjct: 49 LTSRQLVEFYLGKIHKLNPILRGVIEVNPDALLQADKADRERKAKLPGSLLGLHGIPILL 108 Query: 79 KDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD ATK ++T A S L ++ V +KL GA++LGK ++ E+A Y Sbjct: 109 KDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSEWA--------Y 160 Query: 138 YGPVISP--W--RSMDSTD----------KFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + + P W R+ + D TP GSS GS+ +VA L A S+GT+T GS Sbjct: 161 FRATVIPSGWCARTGQAYDFNGVQNPYVLSATPCGSSSGSAISVAANLAAVSLGTETDGS 220 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD- 242 I P+ VGIKPT G SR G++ +P D G I RTV D+ +L I G+D D Sbjct: 221 ILCPSHVNSVVGIKPTLGLTSRAGVVPISPRQDTVGPICRTVSDAVEVLDVIVGFDYRDE 280 Query: 243 ---ATCVNLPVPDYERALDQS-IQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAG 296 + +P Y++ L+ + ++G +GI + Y + S + + ++ L+ G Sbjct: 281 ATRTSSKYIPQGGYKQFLNANGLKGKRLGIVRNPFYMFENGS-VLPQVFEHHFHTLRQGG 339 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IG 354 A +V+ H + A S E ++ A + + L K+++ T + I Sbjct: 340 AILVD----HLEIANIDVIYGSSGEGAALEAEF---KISLNAYLKELVASPVRTLADVIA 392 Query: 355 FGQEVKHRIMIG-----TYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPT 408 F + H I T++ + + K+ L + F + E +D ++TP Sbjct: 393 FNNKFSHLEKIKEYGQDTFLQAEATNGINKKTLLKLARLSRNGFEKLMKEHKLDALVTPG 452 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 + S + + G P ISVPA K +P G+ G Sbjct: 453 SNVSP-----------------------VLAIGGFPGISVPAGYDSKGVPFGICFGGLKG 489 Query: 469 REETLFSVGQIIEKEAGYFRP 489 E L + E+ +P Sbjct: 490 SEPKLIEIAYSFEQATKIRKP 510 >gi|215736816|dbj|BAG95745.1| unnamed protein product [Oryza sativa Japonica Group] Length = 504 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 141/295 (47%), Gaps = 22/295 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N ++A IEV AA D+R L G+P+ +KD Sbjct: 41 LTSTALVRFYLDQITRLNPLLHAVIEVNPDALAQAARADDERATGRRCGPLHGVPVLLKD 100 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK ++ E+ S Y Sbjct: 101 NIATRDRLNTTAGSFALLGSVVPRDAGVAARLRAAGAVILGKASLTEW--------SAYR 152 Query: 140 PVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W + FTP GSS GS+ A A + A ++GT+T GSI PAS Sbjct: 153 PAPNGWSARGGQTLNPYVRSFTPCGSSSGSAVAAAANMAAVTLGTETDGSILCPASLNSV 212 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G++ +P D G I RTV D+ +L AI GYD DA + Sbjct: 213 VGIKPTVGLTSRAGVVPISPRQDSVGPICRTVSDAVHVLDAIVGYDALDAEATGAASKYI 272 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P Y + L +G +GIP + + + +Q+ I ++ GA ++E Sbjct: 273 PNGGYGQFLRMDGFKGKRIGIPNGFFTQEIFEKKQLRAYQKHIQLMRKHGAMVIE 327 >gi|154253483|ref|YP_001414307.1| amidase [Parvibaculum lavamentivorans DS-1] gi|154157433|gb|ABS64650.1| Amidase [Parvibaculum lavamentivorans DS-1] Length = 475 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 135/488 (27%), Positives = 210/488 (43%), Gaps = 64/488 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R D+ A EL + I IE N +NA + + RAAA K ++G +G+P Sbjct: 18 VRKGDVKAEELAEEAIARIEKHNPAINAVVSKLYDIGRAAA----KAPVDG---PFKGVP 70 Query: 76 IGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T+ S G ++ + ++ G +LGK N+ EF + + E Sbjct: 71 FLLKDAFGDLAGTTTRLGSRFRAGTAATEDAALAKRFKKAGLSILGKTNVPEFTLLPTTE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++ YGP +PW ST SSGG++AAVA L + D+GGSIR PAS G V Sbjct: 131 SALYGPARNPWNVNHSTGG-----SSGGAAAAVAAGLVPLAHANDSGGSIRIPASSCGLV 185 Query: 195 GIKPTYGRCSRLG-----IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+KPT R S LG ++S L ++TR+VRDSA +L GY+ Sbjct: 186 GLKPTRARTS-LGPDYGDVLS---GLCHEHVVTRSVRDSAAMLDCTHGYEPGAPYA---- 237 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDAGAKIV 300 P ER + P + R+ + L K ++ L D G ++V Sbjct: 238 APHVERPFLEEAGRK----PGKLRIAFSKTNPAGNPLHADCVKGVEETAKLLADLGHEVV 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E + P + P E S +EG+ + R G ++ Sbjct: 294 EAAPP-----------LKPEEPGSIFLPMWASWLASEIEGEAL------RRGRGPKEDEL 336 Query: 361 HRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG-- 417 + G Y + + + YL ++ + + +R F + DV LTPT + PLG Sbjct: 337 EGLTWGLYEIGKQVSAAQYLMLVKEAQAMTRR--VAGFMESHDVWLTPTLASPPIPLGLI 394 Query: 418 --KEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E + + + V FT N+ G PAIS+P A+ +P+G+ + E TLF Sbjct: 395 DINERDPLKAFAPAVDYVPFTPIQNLTGQPAISLPLAMSSDGLPVGMMFSARFGDEATLF 454 Query: 475 SVGQIIEK 482 + +E+ Sbjct: 455 RLAAQLEE 462 >gi|116317819|emb|CAH65855.1| OSIGBa0140C02.7 [Oryza sativa Indica Group] gi|116317851|emb|CAH65883.1| OSIGBa0148J22.2 [Oryza sativa Indica Group] Length = 506 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 141/295 (47%), Gaps = 22/295 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N ++A IEV AA D+R L G+P+ +KD Sbjct: 43 LTSTALVRFYLDQITRLNPLLHAVIEVNPDALAQAARADDERATGRRCGPLHGVPVLLKD 102 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK ++ E+ S Y Sbjct: 103 NIATRDRLNTTAGSFALLGSVVPRDAGVAARLRAAGAVILGKASLTEW--------SAYR 154 Query: 140 PVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W + FTP GSS GS+ A A + A ++GT+T GSI PAS Sbjct: 155 PAPNGWSARGGQTLNPYVRSFTPCGSSSGSAVAAAANMAAVTLGTETDGSILCPASLNSV 214 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G++ +P D G I RTV D+ +L AI GYD DA + Sbjct: 215 VGIKPTVGLTSRAGVVPISPRQDSVGPICRTVSDAVHVLDAIVGYDALDAEATGAASKYI 274 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P Y + L +G +GIP + + + +Q+ I ++ GA ++E Sbjct: 275 PNGGYGQFLRMDGFKGKRIGIPNGFFTQEIFEKKQLRAYQKHIQLMRKHGAMVIE 329 >gi|302806290|ref|XP_002984895.1| hypothetical protein SELMODRAFT_234630 [Selaginella moellendorffii] gi|300147481|gb|EFJ14145.1| hypothetical protein SELMODRAFT_234630 [Selaginella moellendorffii] Length = 486 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 20/274 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-- 66 V + ++ L++ +++ +LV+ YI I N Q+ A IEV A E R +G Sbjct: 23 VEDIQEALKAGTLTSKQLVEFYIARITRLNPQLKAVIEVSPDALELANEADTYRKQHGAE 82 Query: 67 DARDLEGIPIGIKDCFATKG-IHTQACS-HILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + L GIPI +KD ATK + T A S ++D P ++ V +KL D GA++ GK N+ Sbjct: 83 SCKGLRGIPILLKDNIATKDKLQTTAGSLALVDSIVPR-DAGVVKKLRDAGAIIFGKANL 141 Query: 125 DEFAMGSSNETSYY-----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+ S E + G ++P+ + +T F SS GS+ V+ + ++GT+ Sbjct: 142 SEWMYFRSTEAPHGWSPRGGQTMNPYDPVQTT--FG---SSSGSAVGVSANMATVTLGTE 196 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PASF VGIKPT G SR G+I + ++D G I RT++D+ +L I G D Sbjct: 197 TDGSIINPASFAAVVGIKPTVGLTSRAGVIPLSHNMDSVGPICRTMKDAVEVLDVIVGVD 256 Query: 240 ECD----ATCVNLPVPDYERALDQS-IQGMTVGI 268 + D A +P Y++ L + ++G +G+ Sbjct: 257 DLDSATTAAAAYIPRGGYKQFLKRDGLRGKRLGV 290 >gi|229631868|sp|A5H0J2|DUR1_SACKL RecName: Full=Urea amidolyase; AltName: Full=Pyrimidine-degrading protein 13,15; AltName: Full=Uracil catabolism protein 3,5; Includes: RecName: Full=Urea carboxylase; Includes: RecName: Full=Allophanate hydrolase gi|98626707|gb|ABF58890.1| putative urea amidolyase [Lachancea kluyveri] Length = 1830 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 123/440 (27%), Positives = 191/440 (43%), Gaps = 41/440 (9%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 A+I ++ + A + + N L G+PI +KD +KG T A + + P Sbjct: 44 AWISLINEANLAHQWKVLQSKANKQQLPLYGVPIAVKDNIDSKGSPTTAACPAFE-YNPS 102 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 +STV L D GA+++GK N+D+FA G S YG + +DK GGSS G Sbjct: 103 ADSTVVALLKDAGAIVIGKTNLDQFATGLVGTRSPYGKTPCVF-----SDKHVSGGSSAG 157 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S++AV + ++GTDT GS R PA+ +G+KPT G S G++ SLD + Sbjct: 158 SASAVGRGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGLFSCSGVVPACKSLDCVSVFA 217 Query: 223 RTVRDSAILLKAIAGYD-ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI 281 + D+ K +A D E D LP L + + +T+ IPKE Y Sbjct: 218 MNLSDAERCFKVMAKPDLENDEYSRPLP----SNPLQKYPKNVTIAIPKEVPW-YGETEN 272 Query: 282 DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 K + + I LK AGA IV I E LAR EG Sbjct: 273 PKLYAKAIENLKVAGASIVTIDF----------------EPLLALAR-------CLYEGA 309 Query: 342 DILEMYENTRSIGFGQEVKHRI--MIGTYVLSSRCYD-SHYLRARKIRTLIKRDFTEAFE 398 + E YE T+ + + + + + ++ YD + R R I + + + Sbjct: 310 WVAERYEATKDFFATNPPESSLDPTVTSIIKTATKYDAADSFRYEYQRQGILQKVDQTLK 369 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 +DV+ PT P + P +E + + +T VN+A + A++VPA +P Sbjct: 370 D-IDVLCVPTCPLN--PTFEEVAAEPVLVNSRQGTWTNFVNLADMAALAVPAGFRPDGLP 426 Query: 459 LGLQLIGQPFREETLFSVGQ 478 G+ LIG+ F + L + Sbjct: 427 QGVTLIGKKFTDFALLELAN 446 >gi|311107274|ref|YP_003980127.1| amidase [Achromobacter xylosoxidans A8] gi|310761963|gb|ADP17412.1| amidase family protein 12 [Achromobacter xylosoxidans A8] Length = 475 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 125/475 (26%), Positives = 214/475 (45%), Gaps = 52/475 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ E+ +R+K +S VELV + + E +N +I + A +A A A ++ ++ G Sbjct: 8 LSAVEAARLVRTKAVSPVELVRASLDRAERLQPVLNCFITLCADQAIAEARLAEAALMRG 67 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 DA L G+P +KD T G+ T + P ++ +L +GA+++GK Sbjct: 68 DAAGLLHGLPYTVKDLVNTAGVRTTFGAVPFSANVPAEDAVAVARLRQHGAILIGKTTTP 127 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF S ++ +G + W + T GGSSGG++AA A + A ++ +D GGS R Sbjct: 128 EFGSKSMTDSPLFGHTRNAWNL-----ERTCGGSSGGAAAATAAGITALAVASDGGGSTR 182 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG------IITRTVRDSAILLKAIAGYD 239 PA+ G VG K LG I + + D G TR+V D+ +++ A+AG Sbjct: 183 IPAACNGVVGFK------QSLGAIPHSQAQDAIGNQTYVTPTTRSVADTRLMMAAMAGPH 236 Query: 240 ECDATCVNLPVPDYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 +CD + +P DY A ++++G + ++ + + ++ ++ L D GA Sbjct: 237 DCDPWSLGVPRADYAGAAASHETLRGKRIRYCAAPPGRPVAADVRRAFEAALARLADLGA 296 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 ++ A + + P N + R ++E + S F Sbjct: 297 EVEPFD--------GAGFDVEPIWRVINHTVW-------RTRFLPLIEREPDAYSATF-- 339 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 R I T S Y A RT + R F+Q D++ PT +A PLG Sbjct: 340 ----RRQIATAAAFSA---QQYQEAMFARTALYRKVQALFDQA-DLLAMPTMSRTALPLG 391 Query: 418 KEENNSGSM-GHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + ++ + G + D+ +T+ N+ G PA+SVP L + +PLGLQL+G Sbjct: 392 TDIFDTIDIDGRSFGDIRAHWYPWTMLFNLTGHPAVSVPCGLGQDGLPLGLQLVG 446 >gi|317144888|ref|XP_001820457.2| N-acylethanolamine amidohydrolase [Aspergillus oryzae RIB40] Length = 598 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 127/510 (24%), Positives = 222/510 (43%), Gaps = 74/510 (14%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESD 60 + +V++ +S +++ + +V + I S A+++ AAAEES Sbjct: 111 KYYSVADYHALYKSGELTPIAVVKGLLPLIRRGLSTPGKHSVAFVDSRVDLVLAAAEEST 170 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFR-------PHYESTVTQKLW 112 +R G L +G+P +KD F G T S L+ + P + ++L Sbjct: 171 RRYREGRPLGLFDGVPAAVKDEFDLDGYRTNMGS--LNDYTLEPKSDDPSITNWCIRQLE 228 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GA+++GK++M EF + ++ +YG +P+ D +T GGSS G + AV+ L Sbjct: 229 KAGAIVVGKVSMHEFGLDTTGNNIHYGTPPNPYHP----DYYT-GGSSSGCAYAVSTGLV 283 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GTD GGS+R P+SF VG+KPT+ R S +++A + G + +R A Sbjct: 284 PIALGTDGGGSVRIPSSFCSVVGLKPTHNRLSHYPSVNYASTTSVIGPLAADIRSLAEAY 343 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISW 291 + A P P +L S +G + GIP E +P + + + + Sbjct: 344 RVFA----TPGPDTPFPAPG-PLSLTPSTRGKKILGIP-EVWFSRSTPDVQRLCRSLLDK 397 Query: 292 L-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L + IV I +P +++ A + DG + +T Sbjct: 398 LVTEKDYTIVPIDIP---------FLVEGQTAHAMTILADGA------------ALLPDT 436 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPT 408 +I +RI++ L + YL A+K+R L+ + +++ G+ +I+TPT Sbjct: 437 TNI----TAPNRILL---TLGRTTPATDYLLAQKLRRLLMQHLAALWQEFPGM-IIVTPT 488 Query: 409 TPTSAFP-LGKEENNSG---------SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 T + +P + K E G +M +++ N G+PAISVPA + ++P Sbjct: 489 TACAGWPVVSKSELKWGLSDGDRTLKAMEYVW------LANFTGIPAISVPAGYADPEVP 542 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +GL G+ EE L G E+ R Sbjct: 543 VGLMGNGEWGSEEQLLQWGLEAEELGADLR 572 >gi|163731644|ref|ZP_02139091.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Roseobacter litoralis Och 149] gi|161395098|gb|EDQ19420.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Roseobacter litoralis Och 149] Length = 445 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 128/497 (25%), Positives = 204/497 (41%), Gaps = 75/497 (15%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ +S+ +++ ++ LV + EN N +NA ++ A AE Sbjct: 1 MSPLDG-PISQLVAAVQTGAVTPKTLVSEALARAENRNPAINAICQI-NPHALTEAEHVS 58 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KR+ G+ L G+P+ IKD G+ S + F ++ ++L GAV++G Sbjct: 59 KRLQTGETMQLAGVPVLIKDNIWVAGLRCAQGSRLFADFIAPQDAEAVRRLRVAGAVIIG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 EFA + + G +P TPGGSSGGS AAVA + ++GTD Sbjct: 119 ISTCSEFACKGATNSPLQGITRNP-----VNPDLTPGGSSGGSVAAVAAGIVPLALGTDA 173 Query: 181 GGSIRQPASFTGTVGIKPT-----YGRCSR---LGIISFAPSLDQAGIITRTVRDSAILL 232 GGS R+P + TG G KP YG C GI P I R + D ++ + Sbjct: 174 GGSSRRPPAHTGLCGFKPMQDLIPYGPCHDEPVWGISVICP-------IARRMEDISLAM 226 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +++AG + +P P E A G + ++ ++ DK + L Sbjct: 227 QSLAGLEP-------VPAPMLEIAASSDF-GTGQALDRDVAANF-----DKV----LGVL 269 Query: 293 KDAGAKIV--EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 + AG + +I P T + I P + + LA YG +++ T Sbjct: 270 ESAGVSVTQAQIDWPGTIKG----HSILPLQ-CAGLADL----YG---------DIWRET 311 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD---VILTP 407 + F + +I G +H I E +D VI TP Sbjct: 312 PEL-FDPAIAGQIETGLSFTGVDVAGAHQ---------ISHQMRETLRAALDRYGVIATP 361 Query: 408 TTPTSAFPLGKEENN---SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 TTP +A+P ++ G + FT +N AG+PA+S+P + PLGLQLI Sbjct: 362 TTPCAAWPATQDAPTRIGGKPAGPRDHAAFTPQINHAGVPALSLPCGTDGEGRPLGLQLI 421 Query: 465 GQPFREETLFSVGQIIE 481 + + L ++ +E Sbjct: 422 ARAGHDAELIALAGRLE 438 >gi|297181225|gb|ADI17419.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit and related amidases [uncultured Rhodospirillales bacterium HF0070_31K06] Length = 469 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 122/489 (24%), Positives = 210/489 (42%), Gaps = 41/489 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 ++SK+I A EL++ YI +E N +NA I + ++ R A ++D + G+ L G+ Sbjct: 2 IKSKEIGAEELLNHYIDRVERYNPSLNAIIVMDVERGRERARQADAALAKGEVWGPLHGV 61 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IK+ + G+ T + ++ ++L G V+ GK N+ + Sbjct: 62 PMTIKESYNVAGLPTTNGRPDMKDNIAESDALAVERLKAAGVVLFGKTNVPINLADFQSY 121 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG SPW + PGGSSGGS+AA+A LC G+D GGSIR P+ + G Sbjct: 122 NEVYGTTYSPWDV-----QRVPGGSSGGSAAALAAGLCGFESGSDIGGSIRNPSHYCGVF 176 Query: 195 GIKPTYGRCSRLGII----SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G KPT+G G P L G + R D + A+AG DE D + L + Sbjct: 177 GHKPTWGLIPPHGHALPGHLVQPDLSVVGPLARGAADLETGVLAMAGPDELDGVGLKLDL 236 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK---DAGAKIVEISLPHT 307 P R ++ G V + + D ++P + ++ ++ K DAG + + P Sbjct: 237 P---RPCHTNLSGYKVAV---WADDDVAPVSQEVRERVLAIAKTVEDAGGSVYFDARPD- 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 +EA +R+ D EM ++ ++ +++ T Sbjct: 290 ---------FDSSEAHDIFQTLLWSAMAVRIPDADFAEMVKDAAALDPSDRSGGAMVLRT 340 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-----PLGKEE-N 421 ++ + HY K +I R AF + D + P T AF P+G+ + Sbjct: 341 QTMT---HHDHYTAHNK--RMILRWAWAAFFKEYDAAIAPIMATPAFWHDHRPMGQRKIT 395 Query: 422 NSGSMGHIYNDVFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G+ + +F + + LP+ +P +P+G+Q+IG+ F + + +++ Sbjct: 396 IDGTERPYFEQLFWAGLAVCCYLPSTVIPTGPNGDGLPIGVQIIGRQFGDLETIGLAKLL 455 Query: 481 EKEAGYFRP 489 E E F P Sbjct: 456 EAEGYAFTP 464 >gi|167736586|ref|ZP_02409360.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 14] Length = 154 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 67/156 (42%), Positives = 96/156 (61%), Gaps = 6/156 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + NG+ Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARD-LNAFVHVDAELTLAQAKAADAALANGE 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 AGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS 163 AMGSSNE S +GPV +PW + PGGSSGGS Sbjct: 124 AMGSSNENSAFGPVKNPWDT-----SAVPGGSSGGS 154 >gi|299473650|emb|CBN78044.1| glutamyl-tRNA amidotransferase, subunit A, c-terminal region [Ectocarpus siliculosus] Length = 243 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 86/144 (59%), Gaps = 3/144 (2%) Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 E +R GFG EV+ RI++GT+ LSS D +Y RA+ IR + RDF+ FE+ +DV+ Sbjct: 83 EAMLKSRHDGFGAEVRQRIILGTFSLSSGYSDKYYKRAQAIREGLSRDFSTVFEK-LDVL 141 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 + PT PT+A+ LG E +G +DVFT ++AGLP +SVP +P+G+QL+ Sbjct: 142 VCPTAPTTAYRLG--EYAEKGVGVYADDVFTTPASLAGLPGLSVPCGQDRAGLPIGVQLM 199 Query: 465 GQPFREETLFSVGQIIEKEAGYFR 488 GQ E+ L VGQ E + R Sbjct: 200 GQSLSEDLLLRVGQAYESATPWHR 223 >gi|229491660|ref|ZP_04385481.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus erythropolis SK121] gi|229321341|gb|EEN87141.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodococcus erythropolis SK121] Length = 487 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 124/501 (24%), Positives = 216/501 (43%), Gaps = 60/501 (11%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 FM V+E +R R K +S VE+++S I+ IE N +NA ARA A+ +++ Sbjct: 9 FMDVAELLERYRDKSLSPVEVLESTIERIEALNPTLNAVGHTFFATARAQAKSAERHYAR 68 Query: 66 GD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G + L G+P+ +K+ A +G S + + + ST Q++ D GA++ + Sbjct: 69 GSDVSLPLAGVPVVVKEDEAVQGQPWTQGSKVYEDVIATHTSTFVQRIIDAGAIVHARST 128 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF+ + ++ +G +PW + K++ GGSSGGS+ A+A + + G+D GS Sbjct: 129 APEFSSAAFTQSELWGVTRNPWNT-----KYSSGGSSGGSAVALATGMTHLATGSDVAGS 183 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-----QAGIITRTVRDSAILLKAIAGY 238 IR P+S G VG KP +GR + P + G + RTV D + IAG Sbjct: 184 IRTPSSLNGIVGFKPPHGR------VPVDPPFNLDRYCHCGPMARTVSDCLTMQSVIAGP 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD---- 294 D ++P +S GM + + D+ +D + + L D Sbjct: 238 TSTDIAS-SVPASQLPTFATRSCAGMRIAVIPALG-DW---PVDSDVAENTAKLVDTLTA 292 Query: 295 --AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 A A+I+E+ L T A + YD V +G + + + T Sbjct: 293 LGARAEIIEVDLSRT------------AVMRAAAIHYDHV-FGASISAEASAHPDKVTE- 338 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + +E + +R D+ +L I + F+ D ++TP T Sbjct: 339 --YAKE------FARWARRTRG-DATFLDGLAIEAELYSSVGSLFDT-YDALITPAVATD 388 Query: 413 AFPLGKEE-----NNSGSMGHIYND-VFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIG 465 F G + N +G+ Y + V + N ++ P +++P +P G Q++ Sbjct: 389 GFLAGDDYVEHGINVAGTELEFYLEAVPAITFNILSSCPVLTIPTGFARNGIPTGTQIVT 448 Query: 466 QPFREETLFSVGQIIEKEAGY 486 +P+ ++T F++G EK Y Sbjct: 449 RPYDDQTAFAIGLAFEKVLPY 469 >gi|38346903|emb|CAE04398.2| OSJNBb0006L01.10 [Oryza sativa Japonica Group] gi|38347081|emb|CAD39474.2| OSJNBa0001M07.1 [Oryza sativa Japonica Group] Length = 494 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 141/295 (47%), Gaps = 22/295 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ LV Y+ I N ++A IEV AA D+R L G+P+ +KD Sbjct: 31 LTSTALVRFYLDQITRLNPLLHAVIEVNPDALAQAARADDERATGRRCGPLHGVPVLLKD 90 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 AT+ ++T A S L G ++ V +L GAV+LGK ++ E+ S Y Sbjct: 91 NIATRDRLNTTAGSFALLGSVVPRDAGVAARLRAAGAVILGKASLTEW--------SAYR 142 Query: 140 PVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P + W + FTP GSS GS+ A A + A ++GT+T GSI PAS Sbjct: 143 PAPNGWSARGGQTLNPYVRSFTPCGSSSGSAVAAAANMAAVTLGTETDGSILCPASLNSV 202 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN-----L 248 VGIKPT G SR G++ +P D G I RTV D+ +L AI GYD DA + Sbjct: 203 VGIKPTVGLTSRAGVVPISPRQDSVGPICRTVSDAVHVLDAIVGYDALDAEATGAASKYI 262 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P Y + L +G +GIP + + + +Q+ I ++ GA ++E Sbjct: 263 PNGGYGQFLRMDGFKGKRIGIPNGFFTQEIFEKKQLRAYQKHIQLMRKHGAMVIE 317 >gi|75676462|ref|YP_318883.1| amidase [Nitrobacter winogradskyi Nb-255] gi|74421332|gb|ABA05531.1| amidase [Nitrobacter winogradskyi Nb-255] Length = 449 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 17/246 (6%) Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLG 120 R +N GIP+ IKD F +G ++A S L P ++ V +L G V++G Sbjct: 62 RGVNAAPSPYAGIPVSIKDLFDVRGQVSRAGSLALKDAPPAAKDAPVVARLRRAGFVVIG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NM EFA +YG + WR PGGSS G++ ++ + ++GTDT Sbjct: 122 RTNMTEFAYSGLGINPHYGTPKNGWRR---DVGHVPGGSSSGAAVSITDGMAHGALGTDT 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PA++ G VG KPT R G + + +LD G I R+V A+L Sbjct: 179 GGSCRIPAAYCGIVGYKPTARRIPLDGGVPLSVTLDSYGPIARSVGCCAVL--------- 229 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DA + PV + ++G+ P LD L P + +++ + L DAGA I Sbjct: 230 -DAVLADEPV---TAVAPRPVRGLRFAAPTTVMLDRLDPAVASAFERALDLLADAGALID 285 Query: 301 EISLPH 306 I++P Sbjct: 286 HIAVPE 291 >gi|78045871|ref|YP_362046.1| amidase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034301|emb|CAJ21946.1| glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 486 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 120/473 (25%), Positives = 199/473 (42%), Gaps = 57/473 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 RS+ A L + I +N ++ A ++ +A A A + G D L G+P Sbjct: 53 RSQPTLAARLATQTLTRINQANDRLCAITRLLPARAAADAARVQAALAGGSDGGALAGVP 112 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T A + + P ++ V Q+L D GAV++G NMDEFA G + Sbjct: 113 FVVKDLFDVAGQVTTAGAAVRAHCPPASRDAAVVQRLSDAGAVLVGTANMDEFAYGFATV 172 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P + + GGS+ +A + F ++G+DT GSIR PA+ G Sbjct: 173 NAHYGTTANP-HDLQHLAGGSSGGSAAAVAAGLVPF----ALGSDTNGSIRVPAALCGIY 227 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PT+G G+ F +LD AG +V D L+ I +E Sbjct: 228 GLRPTHGAVPLDGVFPFVDALDVAGPFATSVAD----LRRI-----------------HE 266 Query: 255 RALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 Q + G + RL + +D + G+ L A + I LP + A A Sbjct: 267 VLRGQPLPSCHAGNLRVARLGGWFERNLDPDLEAGLQALLTACNSLSSIDLPEAERARAA 326 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ AE R+ R L G F + R++ G + +S Sbjct: 327 AFVLTAAEGGH---RH---RSALTAHGAQ------------FDPATRDRLLAGLQLPASA 368 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIY 430 D+H D A V+V++ P TP A + ++ + Sbjct: 369 VADAHRF------AQWFADAMHALWDQVEVLIAPATPCVAPRIDQDTIQIDGLPVSARAN 422 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +FT + +A P ++ P ++PLG+QLI P RE+ LF++ +E++ Sbjct: 423 LGIFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFALAAQLERD 474 >gi|84500684|ref|ZP_00998933.1| amidase family protein [Oceanicola batsensis HTCC2597] gi|84391637|gb|EAQ03969.1| amidase family protein [Oceanicola batsensis HTCC2597] Length = 441 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 135/492 (27%), Positives = 224/492 (45%), Gaps = 64/492 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E +M+ +E + + I VEL + ++ AI+ + + + +ARA A + Sbjct: 1 MDEWRWMSAAELGRGIGAGGIDPVELTEVFLDAIDTHEHRDRIFARLTPDRARAEAGAAA 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G + L+G+P+ KD F T G T+A S +L+G P ++ V + G V L Sbjct: 61 QRARTGTRKSPLDGVPVSWKDLFDTAGTATEAGSALLEGRIPDRDARVLARASAFGLVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDST---DKFTPGGSSGGSSAAVAGFLCAASI 176 GK ++ EFA + G I+P + + PGGSS G++A+VA L AA I Sbjct: 121 GKTHLSEFA--------FSGIGINPKTATPPNRHNPAWVPGGSSSGAAASVAYGLAAAGI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+DTGGS+R PA++ VG+K T GR G++ PS D G + RTV D+++LL Sbjct: 173 GSDTGGSVRIPAAWNDLVGLKTTSGRLPLDGVVPLCPSFDTVGPLCRTVEDASLLL---- 228 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 A PD A S+ G+ G + L+ + + ++ I L+DAG Sbjct: 229 ------AIMERGTPPDLRNA---SVVGLRFGALQTAVLEGIRDEPREAYEAAIGRLRDAG 279 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A + + P AL + + AEA YG+ KD +E+ T F Sbjct: 280 ATVEPLEAPEAAEALAQSGVYA-AEA-----------YGIW---KDTIEV---TPQKMFA 321 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + ++G + ++ ++ + +I +R + E G D ++ PT P P Sbjct: 322 E------ILGRFRSGAQMTAPDFVASWEILHRARRSWAERV-AGFDAVIAPTAPN--LPP 372 Query: 417 GKEENNSGSMGHIYNDVFTV----AVNMAGLPAISVP--AALCEKKMPLGLQLIGQPFRE 470 S ++ ++ T+ N+ GL ++++P A C G+ +G+P E Sbjct: 373 DAARMLSDHDYYVTENLLTLRNTRVGNVLGLSSLTLPTGAPAC------GIMFLGRPMGE 426 Query: 471 ETLFSVGQIIEK 482 E L +G EK Sbjct: 427 EALLRIGAAAEK 438 >gi|148256549|ref|YP_001241134.1| putative amidase [Bradyrhizobium sp. BTAi1] gi|146408722|gb|ABQ37228.1| putative amidase [Bradyrhizobium sp. BTAi1] Length = 485 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 131/518 (25%), Positives = 221/518 (42%), Gaps = 68/518 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ +++ + L + ISA EL+D ++ ++ N + N + + + AR +A +D Sbjct: 1 MTNTYYLSATAQLKMLAERRISATELLDLHLDRVQRLNPECNVVVALDEEGARRSARAAD 60 Query: 61 KRII-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I N A L G+P+ IKD FA G+ +RP ++ ++ NGAV+ Sbjct: 61 EAIARNPTAGRLLGLPMTIKDSFAVTGMAVTCGMEEFRDYRPQRDAAAVARIRANGAVIF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ A + + +G +PW D T T GGSSGGS+AA+A +G+D Sbjct: 121 GKTNVPAAAKDHQSYNTLFGLSRNPW---DLTR--TVGGSSGGSAAALAAGFTPLELGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGII-----SFAPS-LDQAGIITRTVRDSAILLK 233 GGSIR P+ F G G K +YG G + APS L G + R+ D +L Sbjct: 176 IGGSIRVPSHFCGVYGHKSSYGLIDIAGHLPPPPGHVAPSGLSVVGPLARSAEDLELLFD 235 Query: 234 AIAGYDECD--ATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGIS 290 + G E + + LP P ++ ++ VG+ + LD P Q + Sbjct: 236 ILLGPAEIERAGAELRLPAPRHD-----DLKSFRVGVWTDAFPLD---PGYAAAIDQLVG 287 Query: 291 WLKDAGAKIVE-------ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 L+ G ++ E + H Y + II GL K+ Sbjct: 288 RLRRCGVQVDEAARPAIDAAASHRAYIQTLFGIIG---------------AGLPPSAKEA 332 Query: 344 LEMYENTRSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 L + G + ++V I R YL R+ R +++ ++ F D Sbjct: 333 LFAEGDAAEAGSYPRQVADAI---------RQPLQSYLAIREERHRLRQAWSYFFAD-YD 382 Query: 403 VILTPTTPTSAFPLGKEENNSGS------------MGHIYNDVFTVAVNMAGLPAISVPA 450 +++ P TPT AFP E ++ + + ++ N + +A LPA ++P Sbjct: 383 ILICPVTPTVAFPHDVERSDFAAQFVRTLAVGDRRIPYLDNLAWPGLATVAYLPATAMPT 442 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +P G+Q+IG + T +++E+E G F+ Sbjct: 443 GALVGSVPAGVQIIGPFLGDRTTLRFARLVERELGSFQ 480 >gi|307136167|gb|ADN34008.1| amidase [Cucumis melo subsp. melo] Length = 514 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 24/297 (8%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRIINGDARDLEGIPI 76 +++ +LV+ Y++ + N + IEV + Q +RA E K+ L GIP+ Sbjct: 51 LTSRQLVEFYLEQVRRFNPILKGIIEVNPDALDQASRADIER--KKSSPRSLSPLHGIPV 108 Query: 77 GIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD ATK ++T A S L G ++ V KL GA++ GK ++ E++ SNE Sbjct: 109 LVKDNIATKDKLNTTAGSFALLGSIVPRDAGVVTKLRMAGAIIFGKASLSEWSYFRSNE- 167 Query: 136 SYYGPVISPWRSMDSTDKF-----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S W + K P GSS GS+ +VA + S+GT+T GSI P++ Sbjct: 168 -----LPSGWSARGGQGKNPYILGEPCGSSSGSAISVAANMVTVSLGTETDGSILCPSTL 222 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN--- 247 VGIKPT G SR G+I + D G I RTV D+ +L AI G D D + + Sbjct: 223 NSVVGIKPTVGLTSRAGVIPISSRQDSVGPICRTVSDATYVLDAIVGADRYDNSTIEASK 282 Query: 248 -LPVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +P Y + L ++G +GI +E Y + + +++ + LK GA +V+ Sbjct: 283 YIPKGGYGQFLRAGGLKGKRIGIVREFYDFGHDETFYPQAYEKVLKTLKKGGAILVD 339 >gi|261197794|ref|XP_002625299.1| amidase [Ajellomyces dermatitidis SLH14081] gi|239595262|gb|EEQ77843.1| amidase [Ajellomyces dermatitidis SLH14081] Length = 554 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 132/501 (26%), Positives = 224/501 (44%), Gaps = 71/501 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L S S E+V S++ IE N ++NA + + +A A++ DK +A L I Sbjct: 42 LFSGRTSCREVVFSFLARIEEYNPKINAVVSL-NPRALEYADDMDKAFGENNANGSLFCI 100 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI +KD + T + T S L +P ++ + L D GA++LGK+N+ E A+ + Sbjct: 101 PILLKDNYNTVDMKTTGSSRALKDSQPTADAPSVKALRDAGAIILGKVNLHELALEGLSV 160 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S G ++P+ D T GSSGG+ AA+A GTDT S+R PAS Sbjct: 161 SSLGGQTLNPY---DLTRTPG--GSSGGTGAAIAASFAVLGTGTDTVNSLRSPASANSLF 215 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVP- 251 I+PT G SR G+I + + D G I R+++D+A L +A GYD D +P Sbjct: 216 SIRPTRGLISRTGVIPVSYTQDVLGPIARSLKDAATALTVMANIGYDPQDNATALVPESV 275 Query: 252 ---DYERAL--DQSIQGMTVGIPKEY----RLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 DY +AL ++G+ +G+ + + R SP ++K IS L+ AGA ++ I Sbjct: 276 LGVDYTKALVAPGRLKGIRLGLIEGFFNRTRDSETSP-VNKVMNDMISKLRAAGATVITI 334 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV--- 359 H + I + E S +L D R+ E +++++ Y + ++G + Sbjct: 335 ---HER-------IYNSIEISKDL---DVQRF----EFRELMDAYLQSETLGGSRPSSLA 377 Query: 360 ------------KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 + + T ++SS ++ R I+ L T +D I+ P Sbjct: 378 ELYSSGEYLVIPEQHSYVTTALVSSTSNATYAARQYGIQHLKLALQTTFKSHSLDAIIYP 437 Query: 408 TTPTSAFPLG--KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK------MPL 459 G + +G +G + G P +++PA +P+ Sbjct: 438 EQQNLVVKTGSPSQSGRNGILGAV-----------TGFPVVTIPAGFSPASKDAPDGVPI 486 Query: 460 GLQLIGQPFREETLFSVGQII 480 G++++G P+ E+ L S+ I Sbjct: 487 GMEILGLPWTEQKLLSIASSI 507 >gi|91787359|ref|YP_548311.1| amidase [Polaromonas sp. JS666] gi|91696584|gb|ABE43413.1| Amidase [Polaromonas sp. JS666] Length = 535 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 213/462 (46%), Gaps = 37/462 (8%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-AR 69 E R + S+ +S VEL+D+ I IE+ N +NA +AR A +++ +++ G+ Sbjct: 41 ELRRLIGSRQLSPVELLDACIARIESVNPAINAICATDFTRARETARQAEAQVMRGEPLG 100 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+G+KD T G+ T + L G P ++ + +L GA++ K N+ + Sbjct: 101 LLHGLPLGVKDLQDTAGLLTTYGNVRLRGNVPSADNALVARLRAAGAIVTAKTNVPDMGA 160 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ +G +P+ + + G ++ ++ + LC G+DTGGS+R PA+ Sbjct: 161 GANTRNPVWGATGNPFNPALNAGGSSGGSAAALAADMLP--LC---TGSDTGGSLRIPAA 215 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG++P+ G + + G + RTV D+A++ A G D D + Sbjct: 216 LCGVVGLRPSPGLVANDARPLGWSVISVLGPMGRTVADTALMFAASVGPDARDPLSYPVD 275 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + + + VG +++ L + P I + ++Q + ++ A + L Sbjct: 276 ASAFWPLQQLDLSTLRVGTTEDFGLCIVDPEIRRVFRQRVEAIRPLVASCEPVDL-QLGD 334 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A A+ I+ A S +A + E ++ G V+ + I + Sbjct: 335 ADRAFDIL---RAESFVAAF--------------AETWQKEPET-LGPNVRANMDIAAAI 376 Query: 370 -LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSGS 425 L+ R + +H + R I R F AFEQ D+IL PTTP + FP L + + Sbjct: 377 TLADRAW-AHLEQTR-----IARRFARAFEQ-YDLILAPTTPVTPFPWTELYAGNIDGQA 429 Query: 426 MGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 M + Y+ + T V +A PA+S+P E MP GLQ+IG+ Sbjct: 430 MRNYYHWLGLTYVVTLATNPALSLPCGSDEHGMPFGLQVIGR 471 >gi|91978265|ref|YP_570924.1| allophanate hydrolase [Rhodopseudomonas palustris BisB5] gi|91684721|gb|ABE41023.1| Amidase [Rhodopseudomonas palustris BisB5] Length = 599 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 106/422 (25%), Positives = 186/422 (44%), Gaps = 52/422 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD G+ T A +RP +ST +L GA+++GK N+D+FA G Sbjct: 64 LYGVPVAVKDNIDVAGLPTTAACPAF-AYRPSKDSTAVARLRAAGAIVIGKTNLDQFATG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG P +M PGGSS GS+ AVA L S+GTDT GS R PA Sbjct: 123 LVGVRSPYG---IPRNAMRP--DLVPGGSSSGSAVAVAAGLVPLSLGTDTAGSGRVPAML 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KP+ G S G++ +LD + TV D+ L+ + D D Sbjct: 178 NNIVGLKPSLGLISTTGLVPACRTLDCISVFALTVDDAMTALRVMGAPDATD-------- 229 Query: 251 PDYERALDQSIQGMT-------VGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEI 302 Y R D+++ MT +G+P+ + + ++ + + GA+++++ Sbjct: 230 -PYSR--DRALATMTATPVRLRLGVPRRDQWQFFGDQQAEQAYADALRRWTALGAELIDV 286 Query: 303 SL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P + A Y E RY +R + + + TR+I G Sbjct: 287 DIEPLYETARLLY------EGPWVAERYLAIRELIDTTPDAV---HPVTRAITLG----- 332 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 G + ++ + + Y R + +RT+ + F +D ++ PT PT A+ + + Sbjct: 333 ----GKGITAADTFAALY-RLQALRTIAEPAFA-----AIDALVLPTAPT-AYTVDEVLA 381 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ +T VN+ L +++PA++ +P G+ L+ + L +G++ Sbjct: 382 EPIALNSRLG-TYTNFVNLLDLCGLALPASIRADGIPFGITLLAPGGHDAQLARIGRLFH 440 Query: 482 KE 483 + Sbjct: 441 AD 442 >gi|332532552|ref|ZP_08408429.1| amidotransferase-like protein [Pseudoalteromonas haloplanktis ANT/505] gi|332037973|gb|EGI74421.1| amidotransferase-like protein [Pseudoalteromonas haloplanktis ANT/505] Length = 499 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 125/490 (25%), Positives = 213/490 (43%), Gaps = 42/490 (8%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD- 67 + E ++ I+A +L +YI I N Q NA I + A A A+ D+ G Sbjct: 26 IDEIHSAYKNNSINAQQLTQNYIDRINKLNPQYNAVISL-EPTAIAQAKTLDELAAKGTW 84 Query: 68 ARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GIP+ +KD TKG + T A S L ++ V ++L + GA++LGK N+ E Sbjct: 85 AGPLHGIPVLLKDNIETKGTLPTTAGSLALKNNVTDNDAFVVKQLRNAGAIILGKANLSE 144 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 +A S+ +S + P GSS GS+ AVA ++GT+T GSI Sbjct: 145 WANFRSSYSSSGWSAVGGETHNAHDVTRNPCGSSAGSAVAVALNFAPIALGTETDGSITC 204 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G IKP+ G+ SR G+I + S D G + +++D+ ++L + G D DAT Sbjct: 205 PASVNGVYAIKPSMGQVSRSGVIPLSSSQDSVGPMAHSLKDALLVLSVLQGEDSLDATTT 264 Query: 247 NLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + +S + +G +P D + + + + + LK AG ++ + + Sbjct: 265 GFELKEGNL---KSKSSLIIGALPS----DKFTIETQRLYAKQLQALKQAGHTVINVDIT 317 Query: 306 HTQYAL--PAYYIIS---PAEASSNLARYDGVRYGLRVEGKDILEMY------ENTRSIG 354 L YYI+ AE + LA +V K + + +NT Sbjct: 318 DNLDTLFVDEYYILLYDFKAEINHYLASTPA-----QVAVKSLKALINFNIQNKNTEMPH 372 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPT-TPTS 412 F Q+ I++ + + + + RTL ++ +D+++ PT +P Sbjct: 373 FEQD----ILVQSQAIDLTNKQKYQETKERYRTLATTAIVNVYKNNKLDIVIAPTVSPAW 428 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 L +N +GS + +AG I++P +P+GL +I E+ Sbjct: 429 KTDLVNGDNFNGSSSSLS--------AIAGTTHITLPVGKVS-GLPVGLSIIANKEGEQA 479 Query: 473 LFSVGQIIEK 482 + II++ Sbjct: 480 AYLYANIIDE 489 >gi|260663043|ref|ZP_05863936.1| amidase family enzyme [Lactobacillus fermentum 28-3-CHN] gi|260552664|gb|EEX25664.1| amidase family enzyme [Lactobacillus fermentum 28-3-CHN] Length = 492 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 133/508 (26%), Positives = 222/508 (43%), Gaps = 70/508 (13%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E +R++++SA ELV + + I+ +N +NA V++ +A A E+D+ I G + Sbjct: 14 TEMAQAVRNQEVSAKELVSASLARIKETNPALNA---VISLRAEEALTEADQLIDRG--Q 68 Query: 70 DLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 G+P+ +K T +G+ + + S + L G ++LG+ N EF Sbjct: 69 PFLGVPLLLKGLGQTFQGLPATNGNRLFKDQVAQSSSNFARALTAAGFIVLGQTNYPEFG 128 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + ++ YG +PW + PGGSSGG+ AAVA + + +D GGSIR PA Sbjct: 129 FKNITDSKMYGDAHNPWNL-----AYYPGGSSGGAGAAVASKMVPIAGASDGGGSIRIPA 183 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAG--IITRTVRDSAILLKAIAGYDECDATCV 246 S+T T+G+KPT GR G + AG IT+ V D+A LL + V Sbjct: 184 SWTSTIGLKPTRGRVIT-GPSDWRSWQGAAGSFAITKDVEDTARLLDVLQALQPAAVFQV 242 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLP 305 L P + L Q+++ + VG E + + P Q ++L+ G ++ EI +P Sbjct: 243 PLQKPSFADLLKQTVKPVRVGFTTESPVGTPVDPEAVAAVHQAATFLEQKGFEVEEIKVP 302 Query: 306 HTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILE-----MYENTRSIGFGQE 358 AL +YY+++ E + A +D V L R D +E +Y R I Sbjct: 303 TDGRALIDSYYLMNEGETA---AMFDQVEASLGRAVTVDDMEPLTWALYRTGRHIS---- 355 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 TY + +D ++ TL + ++LTPTT +A + + Sbjct: 356 ------AATYSNALAAWDQA---GYQMATL---------HEAYPLVLTPTTAMTAPRIDQ 397 Query: 419 EENNSGSMGHIYN-----------------------DVFTVAVNMAGLPAISVPAALCEK 455 + + + + FT N+ G PAIS+P L + Sbjct: 398 TMVSEAQLDQMRDIDALTPAAQQRFIFDQWLPSLTRSPFTQQANLTGEPAISLPTHLTKA 457 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKE 483 +PLG+QL+ +E L V ++ E + Sbjct: 458 GLPLGIQLVAGKGQEGLLLQVAKLFETQ 485 >gi|325921510|ref|ZP_08183365.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Xanthomonas gardneri ATCC 19865] gi|325548057|gb|EGD19056.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Xanthomonas gardneri ATCC 19865] Length = 547 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 108/309 (34%), Positives = 159/309 (51%), Gaps = 36/309 (11%) Query: 16 LRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR--- 69 + S S++ L +Y+Q I+ + ++N+ IE+ Q E+D R ++ + R Sbjct: 56 MASGKTSSLALTRAYLQRIATIDRAGPKLNSVIELNPQA------EADARALDAERRAGR 109 Query: 70 ---DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ +KD + A S L F+P ++ + Q+L GAV+LGK N+ E Sbjct: 110 VRGPLHGIPVLLKDNIDAVPMVNSAGSLALADFKPSRDAFLVQRLRTAGAVILGKTNLSE 169 Query: 127 FAMGSSNETSYYGPVISPW-------RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 +A S ++S S W R+ + D+ P GSS G+ AA+A L A IGT+ Sbjct: 170 WANFRSTKSS------SGWSARGGLTRNPYALDR-NPCGSSAGTGAAIAASLATAGIGTE 222 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS G VG+KPT G SR GII + S D AG +TR+V D+A LL+AIA D Sbjct: 223 TDGSITCPASVNGLVGLKPTVGLISRDGIIPISASQDTAGPMTRSVADAAALLQAIAAPD 282 Query: 240 ECDATCVNLP--VPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDA 295 D + P PDY L ++G +G+ + R D P I + + L+ A Sbjct: 283 PQDPATRDAPSSTPDYLAHLKPDGLRGARLGLLRNPLRED---PAIAAALDRAVQSLRAA 339 Query: 296 GAKIVEISL 304 GA ++E SL Sbjct: 340 GATVIETSL 348 >gi|226309298|ref|YP_002769258.1| amidase [Rhodococcus erythropolis PR4] gi|226188415|dbj|BAH36519.1| putative amidase [Rhodococcus erythropolis PR4] Length = 480 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 117/498 (23%), Positives = 207/498 (41%), Gaps = 52/498 (10%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 FM V+E +R R K +S VE+++S I+ IE N +NA AR A+ +++ Sbjct: 8 TFMDVTEMLERYRDKSLSPVEVLESTIERIEALNPTLNAVGHTFFDTARVQAKSAERHYA 67 Query: 65 NGD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G + L G+P+ +K+ +G S + + + ST Q++ D GA++ + Sbjct: 68 RGSDVSLPLAGVPVVVKEDEPVQGQPWTQGSKVYEDLIATHTSTFVQRIVDAGAIVHARS 127 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 EF+ + ++ +G +PW + K++ GGSSGGS+ A+A + + G+D G Sbjct: 128 TAPEFSSAAFTQSELWGVTRNPWNT-----KYSSGGSSGGSAVALATGMTHLATGSDVAG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-----QAGIITRTVRDSAILLKAIAG 237 SIR P+S G VG KP +GR + P + G + RTV D L IAG Sbjct: 183 SIRTPSSLNGIVGFKPPHGR------VPVDPPFNLDRYCHCGPMARTVSDCLTLQSVIAG 236 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D ++P S+ GM + + + P + + + L GA Sbjct: 237 PTSADIAS-HVPASPLPGLATHSLTGMRIAVIPALGDWPVDPDVAANTAKLVDTLTALGA 295 Query: 298 K--IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + I+E+ L + YD V +G + + + T + Sbjct: 296 RTEIIEVDLSRAA------------IMRAAAIHYDHV-FGASISAEASAHPDKVTE---Y 339 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 +E + +R D+ +L I + F+ D ++TP T F Sbjct: 340 AKE------FARWARRTRG-DATFLDGLAIEAELYSSIGSLFDT-YDALITPAVVTDGFL 391 Query: 416 LGKEENNSG------SMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPF 468 G + G +G V + N ++ P +++P +P G Q++ +P+ Sbjct: 392 AGVDYVGHGINVAGTELGFYLEAVPAITFNILSNCPVLTIPTGFARNGIPTGTQIVTRPY 451 Query: 469 REETLFSVGQIIEKEAGY 486 + T F++G +E+ Y Sbjct: 452 DDHTAFAIGLALEEVLPY 469 >gi|229109411|ref|ZP_04239006.1| Amidase [Bacillus cereus Rock1-15] gi|228674037|gb|EEL29286.1| Amidase [Bacillus cereus Rock1-15] Length = 536 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 128/496 (25%), Positives = 220/496 (44%), Gaps = 60/496 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDVATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKVVVEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV-- 464 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F Sbjct: 465 -----------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQF 512 Query: 469 REETLFSVGQIIEKEA 484 E+ LF++G E+++ Sbjct: 513 GEKELFNIGYAYEQQS 528 >gi|332025124|gb|EGI65304.1| Fatty-acid amide hydrolase 2 [Acromyrmex echinatior] Length = 525 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 121/499 (24%), Positives = 213/499 (42%), Gaps = 55/499 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA------ 68 ++R++ +++ ++V SYI+ I+ +N + ++A A + D+ + + DA Sbjct: 53 KIRNRQLTSEDVVSSYIERIKEIQPILNCVVAERFEEALKEARKCDELLKSQDAPSAEFL 112 Query: 69 ---RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP KDC A K + A I ++ V + + GA+ L N+ Sbjct: 113 TKEKPLFGIPFTTKDCIAIKNMQQTAGLVIRKNTIVDRDAEVIRLIRSAGAIPLALTNVS 172 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E AM + +G +P+ + + GGSSGG A IG+D GGSIR Sbjct: 173 ELAMWWESNNCLFGITKNPYNT-----RHIVGGSSGGEGCIQAAAGSPFGIGSDIGGSIR 227 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-----GIITRTVRDSAILLKAIAGYDE 240 PA F G G KPT G S G A DQ G + R +D ++LK IA + Sbjct: 228 MPAFFNGIFGHKPTKGIVSNDGQYPSAHGYDQEQLLAIGPMCRFAQDLTLILKIIADKN- 286 Query: 241 CDATCVNLPVPDYERAL----DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA- 295 D +N V + L D Q Y + + P I ++ I++ + A Sbjct: 287 ADLLKLNQKVDISQIKLYYMEDDGGQ---------YLISPVDPEIKAAMKRVINYFEKAH 337 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 K ++++ + ++ + A+ + + Y L + E + I F Sbjct: 338 KVKATKVNVQKFKKSIALWL------ANMSCKEEEDFSYELTNRKGQLNVWLEIIKWILF 391 Query: 356 GQEVKHRIMIGTYVLSSRCYDSH----YLRARKIRTLIKRDFTEAF-EQGVDVILTPTTP 410 H + + +C H ++R + + R+F + E G V L PT P Sbjct: 392 MS--NHTFIALVTAIFEKCGLKHGSEKHVRLMQQSKDLYREFKDILGEDG--VFLYPTHP 447 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+A P+ E + +N +T +N+ GLPA + P L ++ +P+GLQ++ +++ Sbjct: 448 TAA-PMHHE-----PLCKPFNFSYTAIINVLGLPATACPLGLNKQGLPIGLQIVAGLYQD 501 Query: 471 ETLFSVGQIIEKEAGYFRP 489 +V + +E+ G + P Sbjct: 502 HLTLAVAEELERGFGGWVP 520 >gi|300309904|ref|YP_003773996.1| aspartate tRNAAsn/Glu-tRNAGln amidotransferase subunit A-like protein [Herbaspirillum seropedicae SmR1] gi|300072689|gb|ADJ62088.1| aspartate tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases protein [Herbaspirillum seropedicae SmR1] Length = 651 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 137/501 (27%), Positives = 226/501 (45%), Gaps = 43/501 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E + + ++D R+ S V + I+A + +NA + + + A + +R Sbjct: 51 EASITHLQSAQDAGRATSRSLVLAYLARIRAYDQQGPSLNAIVTLNPKALEEADQLDRER 110 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +G L GIPI +KD + T + T + L + ++ ++L + GAV+LGK Sbjct: 111 RQSGPRGPLHGIPILVKDNYDTVDMPTTGGTLALATLQAQADAFQVKRLREAGAVILGKT 170 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 M E A G + +S G +P+ + PGGSSGG+ AAVA AA +G+DT G Sbjct: 171 TMHELAAGVTTVSSLTGFTRNPY-----DPRRAPGGSSGGTGAAVAASFAAAGMGSDTCG 225 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+ G++ T G SR G++ + + D A + R+V D AI+L A G D D Sbjct: 226 SIRIPAAHQNLFGLRTTRGLASRSGVMPLSSTQDVAAPLARSVEDLAIMLDATVGSDPQD 285 Query: 243 ATCV--NLPVP-DYERALD-QSIQGMTVGI--------PKEYRLDYLSPTIDKTWQQGIS 290 ++ V N +P Y L S+QG +G+ P++ +S I+K QQ Sbjct: 286 SSTVDANGHIPKSYRDGLRADSLQGARIGVLRALFGAAPEDAE---VSAAINKALQQ--- 339 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYEN 349 LKD GA + ++++P L II P E +L Y G V +IL Sbjct: 340 -LKDQGAIVTDVTIPELDGLLSGSSII-PYEFKYDLGAYLQSHPGAPVGSLGEILARGME 397 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI-RTLIKRDFTEAFEQG-VDVILTP 407 + G +++ + + D L + R+ +K T+ ++ +D ++ P Sbjct: 398 HELLEAGLRLRNSVDL------QNPKDKEELEKVMLKRSALKSLMTDVMQKNHLDTLVYP 451 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T A +G E G+M + GLPA+++P E +P+ L+L+ Sbjct: 452 TIQRKAALIG--EPQGGAMNCQLSAT-------TGLPALALPVGFTEDGLPVSLELLAPE 502 Query: 468 FREETLFSVGQIIEKEAGYFR 488 F E L + E++ G R Sbjct: 503 FAEPALLGLAYGWEQKIGPRR 523 >gi|134293034|ref|YP_001116770.1| amidase [Burkholderia vietnamiensis G4] gi|161521291|ref|YP_001584718.1| amidase [Burkholderia multivorans ATCC 17616] gi|189352537|ref|YP_001948164.1| amidase [Burkholderia multivorans ATCC 17616] gi|134136191|gb|ABO57305.1| Amidase [Burkholderia vietnamiensis G4] gi|160345341|gb|ABX18426.1| Amidase [Burkholderia multivorans ATCC 17616] gi|189336559|dbj|BAG45628.1| amidase [Burkholderia multivorans ATCC 17616] Length = 457 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 50/418 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ +KD F +G T A S +L P + ++ Q+L + GA+++G+ NM EFA Sbjct: 69 LAGLPVSVKDLFDVEGSVTAAGSALLRSAPPANGDAAAVQRLREAGAIIVGRTNMSEFAY 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P + GGSS G++ AVA LCAAS+ TDTGGSIR PA+ Sbjct: 129 SGLGVNPHYGTPTNPVGA-----GRIAGGSSSGAAVAVARGLCAASLATDTGGSIRIPAA 183 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT SR G++ + SLD G I T +I+ + + G E D + + L Sbjct: 184 LCGIAGFKPTAQAVSRDGVLPLSRSLDSVGPIASTAECCSIVHQVLTG-GEPDTSTLRL- 241 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + + + +Y LD L P + + + + ++ L AGA + ++ P Sbjct: 242 ------------DTLRLAVVTDYLLDELDPMVSRAFDRALALLTAAGASVETVAFPEL-- 287 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN---TRSIGFGQEVKHRIMIG 366 N R G Y ++ + + + + + + V R++ G Sbjct: 288 ---------------NAIRAGG--YNAKIVAAEAFAFHRSWLASHAHLYDPRVHTRLLAG 330 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGS 425 + ++ D+ RA I +R AF D L PT A +G +++N+ Sbjct: 331 KDLPAADYLDALDARAELINAARRR--LAAF----DAWLMPTVAIVAPKIGDLDDDNAFF 384 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + VN+ A+++P + +P GL + G + + ++G+ IE + Sbjct: 385 RANAAMLRNPSVVNLLDGCALTLPIP-SDNPLPQGLSVCGLGGADADVLAIGRSIEAD 441 >gi|111219857|ref|YP_710651.1| amidase [Frankia alni ACN14a] gi|111147389|emb|CAJ59039.1| putative amidase [Frankia alni ACN14a] Length = 507 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 134/479 (27%), Positives = 212/479 (44%), Gaps = 50/479 (10%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA----------- 68 D+++ ELV++ + IE + S +NA+ V ++A A A +D + G A Sbjct: 44 DVTSHELVEAALDRIEATQSTLNAFRRVRVREALAEAAAADAALAAGSARGRGGPAADRH 103 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEF 127 R L G+PI IKD G+ T + + F P +S + ++L GAV++GK N EF Sbjct: 104 RPLLGVPIAIKDDTDIAGLPTAFGA--VGEFPPAARDSEMVRRLKAAGAVIVGKTNTPEF 161 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 E +G +PW +D +PGGSSGG++AAVA L +IG+D GS+R P Sbjct: 162 GQWPFTEGPAFGVTRNPW-DLD----HSPGGSSGGAAAAVAAGLVPGAIGSDGAGSVRIP 216 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++T VGIKP GR S + L G +TRTV D A+LL +AG D Sbjct: 217 AAWTHLVGIKPQRGRISSAPVREQFNGLTVYGPLTRTVADGALLLDVLAGSLPIDRDSAP 276 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P + A + +G+ + ++D + + + + A++ +P Sbjct: 277 APAEPFLSAAGHPPPRLRIGLSLHRPYSGMPASLDPAVRAAVERMAEVLARLGHDVVP-- 334 Query: 308 QYALPAYYIISPAEASSNLAR-YDGVR-YGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 P Y ++ + L R DG+R + RV L+ R++ + Sbjct: 335 --VEPPYGLLG----TIFLPRSMDGIRDWAGRVADPSQLD----PRTVANAR-------- 376 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENN 422 + R AR L + + F + +DV+L PTT P L ++ N Sbjct: 377 -----TGRALRPLLPLARAAEPLARLNIGRIFRR-IDVVLAPTTATPPPRVGELNRDTNW 430 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + F N+ G PAI+VPA +P+G QL+G E L S+ +E Sbjct: 431 ATDQAIVAACPFAWPWNVLGWPAINVPAGRTAAGLPVGAQLMGPAGSEALLISLAAQVE 489 >gi|289621527|emb|CBI52310.1| unnamed protein product [Sordaria macrospora] Length = 580 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 144/303 (47%), Gaps = 35/303 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 ++V+LV +Y + I NS + A ++ AAE R L GIPI +KD Sbjct: 61 FTSVDLVTAYTRRILEVNSTLKAVTQLNPDALTIAAELDAARSSGAVKGPLHGIPILLKD 120 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----------- 128 AT + A S+ L G + +STV KL GA++LGK N+ E+A Sbjct: 121 NIATADKMDNTAGSYALVGAKVPEDSTVAAKLRKAGAIILGKTNLSEWANSRSKNYTSGW 180 Query: 129 --MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 G E +YY + P GSS GS A+A L AS+GT+T GSI Sbjct: 181 SATGGQTEGAYY-------------PQQDPSGSSSGSGVAIALGLALASLGTETHGSILA 227 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 P+ VGIKP+ G SR ++ + D G + RTV+D+A LL AI G D D Sbjct: 228 PSDANNLVGIKPSVGLTSRYLVVPISEHQDTVGPMARTVKDAAYLLSAIVGRDPNDNYTS 287 Query: 247 NLPV-----PDYERALDQ-SIQGMTVGIPKEY-RLDYLS-PTIDKTWQQGISWLKDAGAK 298 +P P+Y A D ++ G +G+P+ LD S I +++ +S L+ AGA Sbjct: 288 AIPFPTDQPPNYVSACDYFALGGARIGVPRNLIELDDQSFAPILPAFEKALSTLRSAGAT 347 Query: 299 IVE 301 I++ Sbjct: 348 IID 350 >gi|316935140|ref|YP_004110122.1| amidase [Rhodopseudomonas palustris DX-1] gi|315602854|gb|ADU45389.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 490 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 140/513 (27%), Positives = 217/513 (42%), Gaps = 51/513 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 +S +F V++ L++K +SAVEL I IE + ++NA +A +A +D Sbjct: 3 VSSWSFATVTDLAQALKTKQVSAVELTQDAIGRIERHDDKINAICVRDFDRALQSARAAD 62 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L GIP+ +K+ F G+ T F ++ Q++ G V+LG Sbjct: 63 LALSRGGREPLLGIPMTVKESFNVAGLPTTWGFVEQKNFVAQQDALAIQRVKATGGVILG 122 Query: 121 KLNMDEFAMGS-SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K N+ A+G + YG +P+ TPGGSSGGSSAA+A A S+G+D Sbjct: 123 KTNV-PVALGDWQSYNDVYGTTGNPFDL-----SRTPGGSSGGSSAALAAGYGALSLGSD 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-------SLDQAGIITRTVRDSAILL 232 GGS+R PA G KPT+G C G L G + R+ D A+LL Sbjct: 177 IGGSLRVPAHCCGVYAHKPTFGLCPARGHTPPPFPPLPSNRDLSVIGPMARSAADLALLL 236 Query: 233 KAIAGYDEC-DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 IAG D D L +P A +++ V + + L + Q + Sbjct: 237 DVIAGTDPVFDGIAYQLNLP---AARHTTLKDFRVLLLDTHPLLPTGAAVRGALQTLAAG 293 Query: 292 LKDAGAKIVEIS--LPHTQYALPAY--YIISPAEASSNLARYDGVR-YGLRVEGKDILEM 346 L AG ++ S LP Y ++S A Y G + R++ KD Sbjct: 294 LTRAGVRVERQSPLLPDLAETSRVYMRMLLSFLAAGFPPELYAGAQEMAARLDAKDDSLA 353 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 E R I VLS R ++ A RT ++ + E F + D ++ Sbjct: 354 AERLRGI---------------VLSHR----DWVAADSRRTGLRAQWHELF-KSFDAVIC 393 Query: 407 PTTPTSAFPLGKEENNSGSMGHI------YND--VFTVAVNMAGLPAISVPAALCEKKMP 458 P PT A+ E I Y D V+ + GLP+ ++P + + +P Sbjct: 394 PVMPTPAYTQDHSEPQEDRRIEIDGKAYPYVDQLVWPGIATLPGLPSTAIPVGMSDDGLP 453 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +G+Q++G + T + ++IE+E G F P K Sbjct: 454 VGVQIVGPWLEDRTPLKLAELIEREFGGFTPPK 486 >gi|58039746|ref|YP_191710.1| amidase [Gluconobacter oxydans 621H] gi|58002160|gb|AAW61054.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconobacter oxydans 621H] Length = 395 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 123/423 (29%), Positives = 189/423 (44%), Gaps = 59/423 (13%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMD 125 D L G+P GIKD F +G T A S +L P + +T+ + GA+ + NMD Sbjct: 18 DPGPLAGVPFGIKDLFDVRGEITTAGSKVLANDPPATQDATLVAHMIAGGAIPIALTNMD 77 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G + ++YG +P + ++ GGSSGGS+A VA + + +G+DT GSIR Sbjct: 78 EFAYGFATINAHYGNTRNP----HAPERLA-GGSSGGSAAGVAARMFSIGLGSDTNGSIR 132 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS G G++ T GR S G F PSLD G DSA LKA Sbjct: 133 VPASLCGIWGLRATQGRLSVEGSYPFVPSLDTVGPFA----DSAGGLKAC---------- 178 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +E +S+ + VG + RL + + Q I L A + L Sbjct: 179 -------FEALCARSLTDVDVGSLRIARLGGWFGENMSAPMQTAIDTLSMALGATDVVEL 231 Query: 305 PHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P A A ++IS +E A +L R LR + D + V+ R+ Sbjct: 232 PEVARARAAAFVISASEGAGQHLGR-------LRTQAAD------------YDPAVRDRL 272 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + S+ + +H ++R + EAF + D++L P A + E Sbjct: 273 LAGALLPSTLIFQAH-----RLRHWFRDRMHEAFAK-TDILLAPALVGEAPRFDQPEIEI 326 Query: 424 GSM---GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G ++T + +AG P ++VP + +PLG QLI +P RE+ LF++ + + Sbjct: 327 GGKMVSARANLGLYTQPLTLAGFPVLTVPMKV--PGLPLGAQLIARPGREDQLFALAEKL 384 Query: 481 EKE 483 E + Sbjct: 385 ETD 387 >gi|67517097|ref|XP_658432.1| hypothetical protein AN0828.2 [Aspergillus nidulans FGSC A4] gi|40746502|gb|EAA65658.1| hypothetical protein AN0828.2 [Aspergillus nidulans FGSC A4] gi|259488889|tpe|CBF88705.1| TPA: N-acylethanolamine amidohydrolase, putative (AFU_orthologue; AFUA_1G14880) [Aspergillus nidulans FGSC A4] Length = 619 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 118/482 (24%), Positives = 208/482 (43%), Gaps = 50/482 (10%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESDKRIINGDAR-DL 71 +S +++ +VDS + A++E +K RAAAE S +R +G L Sbjct: 122 QSGELTPTAVVDSLLSVTRRDTKPPGKHSVAFLECAVEKVRAAAEASTQRYKDGKPLGPL 181 Query: 72 EGIPIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +GIP+ +KD G + + G S +K + GA+++GK M E + Sbjct: 182 DGIPVTVKDEVHMDGYRRTLGTKLDFTGEFAGSTSWCVKKWEEAGAIVIGKSTMHELGLD 241 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++N +G +P + GGSSGGS AV L ++G D GGSIR P+SF Sbjct: 242 TTNNNPNFGTPKNP-----HNPNYYCGGSSGGSGYAVGAGLVPIALGADGGGSIRIPSSF 296 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC--DATCVNL 248 G G+KP++ R S + A ++ G I ++ D A+ + +A DA Sbjct: 297 CGVWGLKPSHSRVSGFPTVGLASTVGVLGPIAASIDDLALAYRIMAAPAPPSEDAKSGAF 356 Query: 249 PVPDYE---RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P P E + T+GI +E+ D P + + + + + + I++IS+P Sbjct: 357 PNPLSELNSHPAHSRPKNKTIGIMREW-TDRAEPAVRAVFDRALDFYRKQNYTIIDISIP 415 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + A+ + AE +S L+ +++ L K ++ M Sbjct: 416 YIPEGARAHVLTIMAEIASGLSSPSQIKH-LTAPNKVLVSM------------------- 455 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPTSAFPLGKEENN-- 422 G Y +S + +L A+++R L+ F++ +I TPT+P + + + + Sbjct: 456 GMYQISGQ----DFLAAQRLRGLLMSHLGFLFQKHPGLLIFTPTSPIPGWKIAGGDADLA 511 Query: 423 ---SGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSV 476 S + N + N G PA+S PA E ++P+G+ +G+ EE L + Sbjct: 512 RGVSDGKSSVRNMEYVWLANFTGCPAVSCPAGYAEDNGHRVPIGVMAMGEWGSEEDLIAF 571 Query: 477 GQ 478 + Sbjct: 572 AR 573 >gi|118469924|ref|YP_888764.1| amidase [Mycobacterium smegmatis str. MC2 155] gi|118171211|gb|ABK72107.1| amidase [Mycobacterium smegmatis str. MC2 155] Length = 529 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 147/503 (29%), Positives = 223/503 (44%), Gaps = 46/503 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E F ++ +L S +++ ELV + AI S S +NA+ V+ ++A A A ++D+ Sbjct: 9 ESTFPTLTNQLYQLASGAVTSDELVRRSLHAINASQSTLNAFRVVLTEQALADAAKADRD 68 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+PI +KD G+ T+ + DG +S V ++L GAV++GK Sbjct: 69 RAAGKQLPLLGVPIAVKDDVDIAGVPTRFGTE-GDGRVAEADSEVARRLRAAGAVIVGKT 127 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N E +G +PW + K TPGGSSGGS+AAVA L A+IG+D G Sbjct: 128 NTCELGQWHFTSGPGFGHTRNPW-----SRKHTPGGSSGGSAAAVAAGLVTAAIGSDGAG 182 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PA++T VGIKP GR S + G++ RTV D+A++L A +G + D Sbjct: 183 SVRIPAAWTHLVGIKPQRGRISTWPQPEAFNGVTVHGVLARTVVDAALVLDAASGNADGD 242 Query: 243 ATCVNLPVP----DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 ++ P P DY ++ M+ IP + P I Q L + G Sbjct: 243 ---LHKPAPIQASDYVGVAPGPLRIAMSTKIPFTGVRAKIHPEILAALQTIADHLGELG- 298 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 HT A Y + +D L +L+ + + G G Sbjct: 299 --------HTVKAKDPNYSLR--------MSWD----FLSRSTAGLLDWDDRLDTAGHGV 338 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 HR + + R + LR AR ++R + F VDVI+ PTT P+ Sbjct: 339 VYDHRTVANMRI--GRLLSQNVLRKARAHEAAVQRRMSWIFNL-VDVIIAPTTAQPPPPV 395 Query: 417 GKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E + G + + T A N+ G P+I+VPA +P+G+QL+G E Sbjct: 396 -HECDRLGWLATERKAIAACPLTWAWNLLGWPSINVPAGFTSDGLPIGVQLMGPAESEPL 454 Query: 473 LFSVGQIIEKEAGYF--RPHKWW 493 L S+ +E G+ P WW Sbjct: 455 LISLAAELEAITGWAAREPEVWW 477 >gi|260063509|ref|YP_003196589.1| amidase [Robiginitalea biformata HTCC2501] gi|88782953|gb|EAR14127.1| amidase [Robiginitalea biformata HTCC2501] Length = 557 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 119/419 (28%), Positives = 189/419 (45%), Gaps = 47/419 (11%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ +KD T+ + T A + L R ++ + +L NGAV+LGK+N+ E+A Sbjct: 162 GMPVLLKDNIDTESMPTTAGAVALQENRTE-DAFIVNQLQMNGAVILGKVNLSEWAYYFC 220 Query: 133 N-----ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + ++ G ++P+ +F GGSS GS AVA ++GT+T GSI P Sbjct: 221 DGCPVGYSALGGQTLNPY----GRRQFETGGSSSGSGTAVAAGYAMGAVGTETSGSILSP 276 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 + VG+KPT SR GI+ + +LD G + RTV D+AILL A+ GYD D + Sbjct: 277 SGQNSVVGLKPTVSLLSRTGIVPISSTLDTPGPMARTVTDAAILLDAMRGYDSEDPVALE 336 Query: 248 LP-VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 P + + R ++ G GI + +S + D +++ I L++AGA+I+ I+ P Sbjct: 337 TPTLINGHRVEPVALAGRRFGI-----FEAISES-DSLYRRAIRVLREAGAEIIPITPPE 390 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH-RIMI 365 T L + + + +L Y RV +D + + + + F +E R Sbjct: 391 TD--LDGFSKLLNGDMRKDLPAY----LQKRVRNRDAVRISDVADLVAFNREDSLVRAPY 444 Query: 366 GTYVLSSRCYDS---HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 G L D+ L A K R L G+D T P +A L + Sbjct: 445 GQGRLEGILGDTTGPEDLEALKARLLAA---------GMDYF---TVPWNAHQLDAVLS- 491 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+ + PA+ VP E P GL I +PF+E+ L +G+ E Sbjct: 492 -------VNNRHAAYAALGRHPALCVPMGYRESGEPAGLTFIARPFQEKQLLELGRAFE 543 >gi|152983589|ref|YP_001350146.1| amidase [Pseudomonas aeruginosa PA7] gi|150958747|gb|ABR80772.1| probable amidase [Pseudomonas aeruginosa PA7] Length = 464 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 125/501 (24%), Positives = 202/501 (40%), Gaps = 94/501 (18%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + ++ I+ +NA Q+ R A + +R G R L+G+P+ Sbjct: 19 RELSPSEYYEHLLEHIQRWEPHLNALYRFDPQRVREQAAAATERWRKGQPRGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPQGSAATAAQPEPRDAPPAARLREAGAIVLAKTTVPDFGMLSSGISSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGITRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRGMDDCLLLMRHLAQPDARDATSLPPQTLDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++ + +G+ + R+ + P +D+ G+ Sbjct: 247 AEPVSVRDLEIGLQLDPGCGLQPDAEIRAAVEAAARLFEEQGARVRVVEPLMDRALLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 W ++++ + LP YI + AE + ++ D VR Sbjct: 307 DDFWRARLWSELLRLDETRRARVLP--YIHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q + R R+ +L F E +D++LTP Sbjct: 351 ------GFNQTFEMR--------------------RRAASL----FGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVGAFPADWASPLNDPHRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFR 488 F + L VG+ E G R Sbjct: 436 FTDTWLLRVGKTYEGWRGPIR 456 >gi|291227346|ref|XP_002733647.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 313 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 31/315 (9%) Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 L +IGTD GGSIR PAS G VG KPTYGR S G S SL G + VRD+A+ Sbjct: 10 LSPVAIGTDAGGSIRIPASLCGVVGFKPTYGRVSLAGGCS-DFSLLHHGPLACCVRDAAL 68 Query: 231 LLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 +AG D+ D T ++ P+ +R D+S+ G+ VGI + D S I + ++ + Sbjct: 69 SYAIMAGPDKKDPTSLHQPIVSLDRFDDKSLTGLRVGIDWRFFRDT-STEILASCEKALL 127 Query: 291 WLKDAGAKIVEISLPHTQYALPAYYIISPAEASS-NLARYDGVRYGLRVEGKDILEMYEN 349 +++ GAK+V++ +P + A+ ++ +E + N ++ L + G D + Sbjct: 128 YIESLGAKVVDVQIPELEELRIAHLCVALSEMGTMNREEFNSC---LHLMGGDTIS---- 180 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 S G GQ + G S +++A + R + E F + VD I+TP T Sbjct: 181 --SNGVGQ-----LFTG----------SDFVQANQQRGRSMKFIREIFGK-VDCIITPAT 222 Query: 410 PTSAFPLGKEENNSGSM--GHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +A + + G++ + N + + NM GLP++ +P A +P+ LQL+G Sbjct: 223 GKTAVKIHPGDLKYGAVEESTLNNYIRYMFIGNMLGLPSLVLPIAYDTNGLPIALQLLGN 282 Query: 467 PFREETLFSVGQIIE 481 ++E+ + +G E Sbjct: 283 WWQEDVVLRIGHATE 297 >gi|229144564|ref|ZP_04272967.1| Amidase [Bacillus cereus BDRD-ST24] gi|228638977|gb|EEK95404.1| Amidase [Bacillus cereus BDRD-ST24] Length = 536 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 128/496 (25%), Positives = 220/496 (44%), Gaps = 60/496 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDVATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKIVVEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV-- 464 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F Sbjct: 465 -----------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQF 512 Query: 469 REETLFSVGQIIEKEA 484 E+ LF++G E+++ Sbjct: 513 GEKELFNIGYAYEQQS 528 >gi|169619497|ref|XP_001803161.1| hypothetical protein SNOG_12947 [Phaeosphaeria nodorum SN15] gi|160703839|gb|EAT79747.2| hypothetical protein SNOG_12947 [Phaeosphaeria nodorum SN15] Length = 677 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 139/546 (25%), Positives = 222/546 (40%), Gaps = 75/546 (13%) Query: 1 MSELNFM--AVSESRDRLRSKDISAVELVDSYIQAIENSN--SQMNAYIEVVAQKARAAA 56 MS N + ++++ + L + ++S+V+LV Y+ I + +NA+ V A Sbjct: 1 MSRFNIVEASIADHKRALDAGEVSSVDLVICYLLRIAKHDICGGLNAFT-VFNDNVFEEA 59 Query: 57 EESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 E SD R G R LEGIP IKD + G+ S L G +S + KL G Sbjct: 60 EASDARRDQGLPPRPLEGIPYAIKDSYKVAGMSVTDGSPALAGLMSSEDSAIAAKLRAAG 119 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A+++GK NM A G + YG SP+ T F+ GSS G++ ++A + A S Sbjct: 120 AILIGKTNMPPMAAGGM-QRGKYGRAESPYNPKYLTAAFS-SGSSNGAATSLAMSMVAFS 177 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G++T S R PAS V P+ G S G+ + D R++ D +L I Sbjct: 178 MGSETVSSGRSPASNNALVCYTPSKGLLSCRGLWPLYVTCDVPVPYARSMDDMLTVLDVI 237 Query: 236 AGYDECDAT--------CVNLPVP---DYERALD-QSIQGMTVGIPKEY----------R 273 A DE D T V +P P DY+ + Q ++G +G+PK Y + Sbjct: 238 ATEDE-DTTGDFIREQKYVEIPKPTVMDYQALRNSQKLKGKRIGVPKMYVGEQDEDPHAK 296 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSN-----LAR 328 Y+SP + WQ+ LK+ G +IV HT + L Y +N A Sbjct: 297 HPYVSPAVIALWQETERQLKELGVEIV-----HTDFPLVTRYENDSVSGEANNVEGCPAN 351 Query: 329 YDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMI---------GTYVLSSRCYDSH 378 ++ + G+ + + + + N +I ++K M+ T++ D Sbjct: 352 WNQLERGVLIAKAWNAFLVENNDPNIKCLADIKDPAMLFPKPPDYLPDTFLEVRNWIDYA 411 Query: 379 YLRA--------------------RKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLG 417 L A + + KRD + E +DVI P L Sbjct: 412 GLPAILDSVKERSIHDIEGMSQALQALEAQRKRDLEDWMDEHTLDVIAFPA--QGDVGLA 469 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSV 476 E+N S H + + P SVP L +K MP+ + G+ +R++ L Sbjct: 470 DLESNYSSTKHSLTNGVKYSNGTPLNPPPSVPMGLMRDKDMPVNITFAGKAYRDQELLGY 529 Query: 477 GQIIEK 482 E+ Sbjct: 530 AWAFEQ 535 >gi|121701005|ref|XP_001268767.1| N-acylethanolamine amidohydrolase, putative [Aspergillus clavatus NRRL 1] gi|119396910|gb|EAW07341.1| N-acylethanolamine amidohydrolase, putative [Aspergillus clavatus NRRL 1] Length = 617 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 117/451 (25%), Positives = 202/451 (44%), Gaps = 48/451 (10%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP 101 A++E A+ AAAE S KR G L+G+P+ +KD +G S + F+ Sbjct: 150 AFVESQAELVLAAAEASTKRYKAGQPLGPLDGVPVAVKDEVHVEGYQRNLGSKL--DFKG 207 Query: 102 HYEST--VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 ++ T +KL + GAV++GK M E + ++N YG +P + D + G S Sbjct: 208 DFDGTSWCVEKLEEAGAVVIGKTTMHELGLDTTNNNPNYGTPKNP----HNQDYYCGGSS 263 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 G A AG L ++G D GGSIR P+SF G G+KP++GR S S AP++ G Sbjct: 264 GGSGYAVGAG-LVPIALGADGGGSIRIPSSFCGIWGLKPSHGRISSFPTASLAPTVGVYG 322 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI---QGMTVGIPKEYRLDY 276 + +V D A+ + +A V+ PD +L S + T+GI +++ +D Sbjct: 323 PMAASVDDLALAYRLLATPAPATEDPVSANFPDPISSLSASYPRPKNKTIGIVRDW-IDR 381 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 P + + + + + +V+I++P+ A+ + AE +S L Sbjct: 382 AEPPVRAVFDAALDFYRKHSYTVVDIAIPYLPEGQRAHILTIMAEIASGLTP-------- 433 Query: 337 RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA 396 I + T+ + + +G + ++++ + A+++R L+ Sbjct: 434 ----AQISTLTAPTKVL---------VSMGMWQITAQ----DLIAAQRLRNLLMSHLAHL 476 Query: 397 FEQGVD-VILTPTTPTSAFPLGKEEN----NSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 F+Q +ILTPTTP + + + S G + N + N G PAIS PA Sbjct: 477 FQQHPGLLILTPTTPIPGWKISSATDLVRGVSDGKGSVRNMEYVWLANFTGCPAISCPAG 536 Query: 452 LC----EKKMPLGLQLIGQPFREETLFSVGQ 478 ++P+GL +G+ EE L + + Sbjct: 537 YAGGDEGARVPVGLMAMGEWGTEEDLLAFAR 567 >gi|114799088|ref|YP_759827.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hyphomonas neptunium ATCC 15444] gi|114739262|gb|ABI77387.1| glutamyl-tRNA (Gln) amidotransferase, A subunit [Hyphomonas neptunium ATCC 15444] Length = 428 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 123/471 (26%), Positives = 204/471 (43%), Gaps = 53/471 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIK 79 ++ +E Y I N +NA++ + +A+A A+ ++ R + G ++G GIK Sbjct: 1 MTPIERFQQYADRIARHNPSLNAFLHLRLDEAKAEAQAAEARHVVGKPLSPIDGWCFGIK 60 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 A KG+ A ++ V ++L GAV+LG +NM E A+G++ + ++G Sbjct: 61 ANIAVKGLPHHAGIGAYRDVIAAEDAGVVRRLRAAGAVILGIVNMHEGALGATTDNPFFG 120 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW+ + +TPGGSSGGS AAVA LC ++G+DT GS+R P+++ G GIKP Sbjct: 121 RTQNPWK-----EGYTPGGSSGGSGAAVAAGLCDVALGSDTMGSVRIPSAYCGVQGIKPG 175 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 G S G+++ + +LD G R V L + G C Sbjct: 176 AGLVSNEGVLALSHTLDTVGPHARDVSSLRAALSVMTGQPMAAGPC-------------- 221 Query: 260 SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISP 319 ++ GM + I D + ++ + +S ++ AGA+ Y P Y Sbjct: 222 TLNGMKLAIWDGIGRDGMEDVVEDGFAVAVSKIEAAGAE--------ADYEEPFGY---- 269 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 +R G+ VE +I +T GF + ++M + Y Sbjct: 270 ---QYGRSRRAGLLIS-EVEASEIHREMLSTDPEGFSALFR-KLMAWGVARPAEEVALAY 324 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG--KEENNSGSMGHIYNDVFTVA 437 R++ T R F + D ++ P P +AF EN + FT Sbjct: 325 EHLRQVETAAARVF-----EAHDFVIAPVAPQTAFAFDTPAPENQAD---------FTAW 370 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 N AGLPA +V + L + +PL +Q+IG + + + Q +E G R Sbjct: 371 ANFAGLPAAAVCSGLSPQGLPLSVQVIGPKGSDARVLDMAQALEALFGAPR 421 >gi|288960642|ref|YP_003450982.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] gi|288912950|dbj|BAI74438.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] Length = 608 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 123/416 (29%), Positives = 181/416 (43%), Gaps = 61/416 (14%) Query: 68 ARDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+P +KD G+ T AC +T Q+L D GA+++GK N+D+ Sbjct: 79 ALPLYGVPFAVKDNIDVAGLPTTAACPEYTYTA--TDTATAVQRLLDAGAILVGKANLDQ 136 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA G S YG +P + PGGSS GS+ AVA L ++GTDT GS R Sbjct: 137 FATGLVGVRSPYGVARNPIDPL-----CVPGGSSSGSAVAVASGLVGFALGTDTAGSGRV 191 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TC 245 PA+FT VG+KPT G S G++ SLD + TV D+ +L +A D DA + Sbjct: 192 PAAFTNIVGLKPTKGLVSTAGVVPACRSLDCVSVFALTVEDAMDVLAVMAAPDPLDAYSR 251 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISL 304 PVP RA G+P+ +L + ++ +++ + L G V + Sbjct: 252 AAPPVPAALRA------PFRFGVPQADQLRFFGNVEAERLYREALDRLTGLGGVAVPVDF 305 Query: 305 -PHTQYALPAYYIISPAEASSNLARY--DGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 P + A Y AE ++ + + D GL V TR I G KH Sbjct: 306 APFAETAALLYSGPWVAERTAAVGEFLADYTDAGLAV-----------TRGIIEGGH-KH 353 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAF 414 + C+ + Y ++ L +RD T A +D++ PTT T A Sbjct: 354 DAV--------DCFRAMY----RLEAL-RRD-TAAVWDAIDLLAVPTTGTIYTVAEVMAD 399 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P+ N +G N FT +++ G I++P+ P GL L+ FRE Sbjct: 400 PVALNTN----LGTYTN--FTNLLDLCG---IAIPSGFQADGRPAGLTLLAPAFRE 446 >gi|218896892|ref|YP_002445303.1| amidase family protein [Bacillus cereus G9842] gi|218544046|gb|ACK96440.1| amidase family protein [Bacillus cereus G9842] Length = 536 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 219/502 (43%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKTVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 G A+ A I AE NL + Y + D +N Sbjct: 366 G-------------AILADNIELSAEGVDNLQT---LEYEFKHNVNDYFSQQKNIPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ ++ I + E FE V Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGSE-----------KSAITK---EEFENVVQ------ 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQANAKKELDRYLVEKGLDALVMINNDEILLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 +G+ F E LF++G E+++ Sbjct: 507 FVGKQFGERELFNMGYAYEQQS 528 >gi|86142308|ref|ZP_01060818.1| amidase [Leeuwenhoekiella blandensis MED217] gi|85831060|gb|EAQ49517.1| amidase [Leeuwenhoekiella blandensis MED217] Length = 547 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 136/479 (28%), Positives = 220/479 (45%), Gaps = 63/479 (13%) Query: 25 ELVDSYIQAIENSNSQ----MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 ELV Y+ I+ + + +N+ I + + A E +KR + D + G+PI +KD Sbjct: 98 ELVLFYLTRIKKYDRENELSLNSIIALNPKILDQARELDEKRPQDLDPYSIYGMPILLKD 157 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM-----GSSNET 135 + T A + + + ++ +TQKL +NGA++LGK N+ E+A S + Sbjct: 158 NINASDMPTTAGAVVFENNNAG-DAFITQKLKENGALILGKANLSEWAYFFCGDCPSGYS 216 Query: 136 SYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + G ++P+ R + T GGSS GS ++A A++G++T GSI P+S V Sbjct: 217 AVGGQTLNPYGRKIHDT-----GGSSSGSGVSMAANFAVAAVGSETSGSILSPSSSNSVV 271 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPT G SR GI+ + +LD G +TRTV D+AILL+A+ G D DA V+L + + Sbjct: 272 GLKPTIGLLSRGGIVPISSTLDTPGPMTRTVVDNAILLQAMIGLDADDAKAVSLQAENQD 331 Query: 255 -----RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +ALD E RL Y D + Q + LKDAGA +VE+ P Sbjct: 332 YISALKALDAE------AFLTEKRLGYYKGYEDTLYIQAVQALKDAGATLVELERPEIN- 384 Query: 310 ALPAYYIISPAEASSNLARYDGVRYG---LRVEGKDILEMYENTRSI---GFGQEVKHRI 363 LP + + + +L Y +YG L V+ + + Y S+ +GQ ++ Sbjct: 385 -LPQFVRVLNLDMKKDLPDYIA-KYGAKSLSVKDLNDITAYNKKDSLVRMPYGQ----KL 438 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G VL + I+ ++R+ F++ P A N+ Sbjct: 439 LYG--VLEDSASTEEF---TAIKDTLERNGRLFFDE----------PMQA-------NDL 476 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ++ I N + A +A PAI+VP + P+GL I E L + E+ Sbjct: 477 DAVLSINNYMAGYAA-VAKYPAITVPMGYQDNNRPMGLTFIAPTLSEAQLLELAYAYEQ 534 >gi|302403847|ref|XP_002999762.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium albo-atrum VaMs.102] gi|261361518|gb|EEY23946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium albo-atrum VaMs.102] Length = 720 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 126/498 (25%), Positives = 213/498 (42%), Gaps = 56/498 (11%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA------RAAAEES 59 F ++ + + + + ++V++ IE ++ A +A++A +A AE+ Sbjct: 253 FPSIDDLQALYKDGQTTPTDVVNAAFDRIEAYQNEDPAVWTSLAKRADVLVAAKALAEKY 312 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVM 118 ++ + L G+P G+KD +GI T A C + P +T Q + D G + Sbjct: 313 KEKPLP----PLFGVPFGVKDSIDVEGIETTAACPSY--AYVPKATATCVQHILDAGGIY 366 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N+D+ A G S S YG S+ S D GGSS G AVA L ++ T Sbjct: 367 VGKTNLDQLATGLSGCRSPYGVP----HSIFSKD-LIAGGSSSGGCVAVAARLVPFTVAT 421 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GS R PA+F G VG KPT G S G+I +LD I+ +V D+ + + IA + Sbjct: 422 DTAGSGRVPAAFNGVVGFKPTKGTISARGLIPACKTLDSIAIVATSVADARAVWRVIAKH 481 Query: 239 DECDATCVNLP--VPDYE---RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D+ D LP +P ++ R L G +P L+ +P + + + + L+ Sbjct: 482 DKADPYS-KLPHTLPTWKTDFRGLKDG--GFDFAVPPPAALEACTPEYRRLFAEAVKKLQ 538 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE--GKDILEMYENTR 351 AG + L +T + A + Y+G R+ G++ L ++ Sbjct: 539 SAGGR-----LRNTDWE---------AFERAGELLYEGALLHERITCIGREFL---RSSI 581 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ---GVDVILTPT 408 G V ++ + YD R + + + R AF+ GVDV++ PT Sbjct: 582 QDGGLHPVIQKLFSDALNKAPDAYD--VFRDQATQAELSRRTHMAFDTLSGGVDVLVVPT 639 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKMPLGLQLI 464 T P +E + FT N+ L +SVPA E ++P G+ ++ Sbjct: 640 --TVCHPTFEEIAADPIRLNARLGTFTHFANIVDLCGLSVPAGTYLDEKETELPFGVTIL 697 Query: 465 GQPFREETLFSVGQIIEK 482 + V +++E+ Sbjct: 698 AGSGFDAKALDVARVLEE 715 >gi|299067850|emb|CBJ39061.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia solanacearum CMR15] Length = 448 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 20/236 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ IKD F G T A S L R ++T +L GAV+LG+ NM EFA Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAHQRAATSDATAVARLRAAGAVLLGRTNMSEFAF 132 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P D T GGS+ G + VAG + A++GTDTGGSIR PA+ Sbjct: 133 SGLGLNPHYG---TPRTPADGTR--AAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G KPT R G + + SLD G + +V D ++ A+ D V L Sbjct: 188 FCALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSV-DCCAIVDAVLSGQALDTDAVPL- 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 G+ +G+ ++Y L T+ + + ++ L+ AGA IV P Sbjct: 246 ------------AGLRLGLTRDYVAADLDDTVATAFARAVARLERAGAHIVRFEFP 289 >gi|146339134|ref|YP_001204182.1| indoleacetamide hydrolase [Bradyrhizobium sp. ORS278] gi|146191940|emb|CAL75945.1| Indoleacetamide hydrolase (IAH) (Indole-3-acetamide hydrolase) [Bradyrhizobium sp. ORS278] Length = 474 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 132/476 (27%), Positives = 214/476 (44%), Gaps = 61/476 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R+K++++ E V + + I N + NA + V A++A AAA+ +D+ + G L G+ Sbjct: 25 IRNKEVTSREAVTACLDRIGAVNPEFNAVVSVQAEEALAAADLADRMVAAGTTLGPLHGV 84 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ K KG+ T ++ V L GAV++G+ N F+M + Sbjct: 85 PVTTKINVDQKGLPTTNGVVAFKDNIAADDAPVVANLRKAGAVIIGRTNTPAFSMRWFTD 144 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G ++PWR TPGGSSGG++ A A +CA + G D GGSIR PA TGTV Sbjct: 145 NELHGRTLNPWRP-----GRTPGGSSGGAAVAAATGMCAIAHGNDGGGSIRYPAYCTGTV 199 Query: 195 GIKPTYGRCSRLGIISFAPSLDQ--------AGIITRTVRDSAILLKAIAGYDECDATCV 246 G++P++GR APS Q G ITR V D+ + L A+A D D V Sbjct: 200 GLRPSFGRVPAFN--GTAPSERQLSLQLISVQGAITRNVEDARLALAAMAAPDPRDPWHV 257 Query: 247 NLPV-------PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 +P+ P LD + GM +P ++ ++ + L AG ++ Sbjct: 258 AMPLEGPRIDHPGVAACLDPAGVGM-------------APEVEAAVRKAAAILHRAGYEV 304 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 P A A+ + EA LA ++G + + M T + Sbjct: 305 TWRDPPDVAAAAQAWNDFAQGEARVTLAS-QVEQHGDALARRAFALMMNRTPELDV---- 359 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 T ++ + + YLR ++ F Q ++L P +A P G + Sbjct: 360 -------TGLIKASSARATYLRRWQL-----------FMQEHPLVLCPVAMETALPYGVD 401 Query: 420 ENNSGSMGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ S+ +Y + VF A GLP+ISVP + E +P+G+Q++G FRE+ + Sbjct: 402 LDSDASVDRLYRSHVFLFATAYLGLPSISVPTGVHE-GIPIGVQIVGPRFREDLVL 456 >gi|218236061|ref|YP_002366642.1| amidase [Bacillus cereus B4264] gi|218164018|gb|ACK64010.1| amidase family protein [Bacillus cereus B4264] Length = 536 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 126/496 (25%), Positives = 220/496 (44%), Gaps = 60/496 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 IDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNVMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV-- 464 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F Sbjct: 465 -----------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQF 512 Query: 469 REETLFSVGQIIEKEA 484 E+ LF++G E+++ Sbjct: 513 GEKELFNIGYAYEQQS 528 >gi|260949973|ref|XP_002619283.1| hypothetical protein CLUG_00442 [Clavispora lusitaniae ATCC 42720] gi|238846855|gb|EEQ36319.1| hypothetical protein CLUG_00442 [Clavispora lusitaniae ATCC 42720] Length = 1864 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 115/440 (26%), Positives = 192/440 (43%), Gaps = 52/440 (11%) Query: 46 EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 E ++ + R SDK + L G+P+ +KD KG+ T A + P ++ Sbjct: 104 ESLSHQWRFLQSHSDKTSL-----PLYGVPVAVKDNIDVKGMETTAACPSF-AYSPTEDA 157 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 T + L GA+++GK N+D+FA G S YG I+P + DS ++ GGSS GS++ Sbjct: 158 TTVRLLRSAGAIVIGKTNLDQFATGLVGTRSPYG--ITP-NTFDS--RYVCGGSSAGSAS 212 Query: 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV 225 VA + S+GTDT GS R PA+ +G+KPT G S G++ SLD + + + Sbjct: 213 VVARGIVPLSLGTDTAGSGRVPAALNNLIGLKPTKGVFSAAGVVPACKSLDCVSVFAQNL 272 Query: 226 RDSAILLKAIAGYDEC-DATCVNLPVPDYERALDQSIQGMTVGIPKE--YRLDYLSPTID 282 +D+ + +A D DA +P P+ S + V +PKE + + +P + Sbjct: 273 QDAQMAFNILAQADGAHDAYSRAMP-PNARLTFGPSAR---VAVPKELVWCGEEENPAL- 327 Query: 283 KTWQQGISWLKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 +++ +S + G++I I + P A Y E RY R L Sbjct: 328 --FERAVSHVASTGSEISSIDIGPLLDLAKCLY------EGPWVAERYWAAREFLA---- 375 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA---RKIRTLIKRDFTEAFE 398 N V I G ++ + Y R +K+R L+ Sbjct: 376 ------SNPPEKDLDPTVARIIRGGEKYSAADAFGFEYKRQAILQKVRPLL--------- 420 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 + VDV++ PT P + P ++ + +T VN+A L A++VPA + +P Sbjct: 421 ENVDVLVLPTAPLT--PTIEQVQKDPIGVNSCQGTYTNFVNLADLSALAVPAGFRKDGVP 478 Query: 459 LGLQLIGQPFREETLFSVGQ 478 G+ + Q + + L + Sbjct: 479 FGITFLSQAYNDYALLDFAE 498 >gi|163854386|ref|YP_001628684.1| putative amidase [Bordetella petrii DSM 12804] gi|163258114|emb|CAP40413.1| putative amidase [Bordetella petrii] Length = 431 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 124/479 (25%), Positives = 208/479 (43%), Gaps = 62/479 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ELN ++ + + L +++SA +L+ + IE + ++A+ + +A A A D+ Sbjct: 4 ELNCLSATRAAQLLARRELSAEQLLRACFARIEQRDGVVHAWAALDKAQALAQARALDQS 63 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+P G+KD FAT + T S I +G RP ++ + GA++ GK Sbjct: 64 ATRGV---LHGLPFGVKDMFATFDLPTSYGSPIYEGHRPPMDAAAVALCREAGALVAGKT 120 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 EFA T GP +P +TPGGSS GS+AAV + ++GT T G Sbjct: 121 VTTEFA------TYQPGPTRNP-----HNPAYTPGGSSSGSAAAVGDCMVPFALGTQTAG 169 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI +PA++ G VG KP++GR +R G+ S A SLD G R+V D A+ Sbjct: 170 SIIRPAAYCGVVGFKPSFGRVARAGLKSLAESLDTIGGFARSVDDVALF----------- 218 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 V + P R LD + +G+ + + + P K ++ L AGA++ E+ Sbjct: 219 -ASVLMRDPGL-RELDYDSR-PRIGMYRTLQWRHTLPETRKAYEFAAGLLSRAGAQVCEL 275 Query: 303 SLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 LP AL + I EA+ +LA +E+ G Sbjct: 276 ELPPDLCALVQVHADIMSFEAAQSLA-------------------FEHVHHAGRLSSSLL 316 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 ++ +S+ D H R R R E + + D++L P+ A P ++ Sbjct: 317 ALLEAGSQISA---DEH--RVNLERAAQGRAQAEPWFEDYDLLLAPSASGEA-PFIEQGT 370 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 ++ + G P + +P + +P+GLQ +G+P + ++ + + Sbjct: 371 GDPQFCRVW--------TLFGCPCVHLPFDTGPQGLPVGLQAVGRPGDDRRTLAIARWV 421 >gi|13022192|gb|AAK11683.1|AF342826_4 putative urea amidolyase [Enterobacter cloacae] Length = 604 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 119/426 (27%), Positives = 192/426 (45%), Gaps = 40/426 (9%) Query: 57 EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNG 115 E++ R G+ L GIP G+KD G+ T A C + P + V ++L G Sbjct: 70 EQAMARKARGEELPLFGIPFGVKDNIDVFGLPTTAGCPEF--SYMPQSHAFVVEQLIAAG 127 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A+ +GK N+D+FA G + S YG P D +++ GGSS GS+ AV S Sbjct: 128 AIPIGKTNLDQFATGLNGTRSPYG---IPTCVFD--ERYISGGSSSGSAVAVGSGFVPFS 182 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDT GS R PA+F VGIKPT G S G++ A SLD I +V D+ + + Sbjct: 183 LGTDTAGSGRVPAAFNNLVGIKPTKGTISTRGLVPAARSLDCISIFAHSVDDALTVARIA 242 Query: 236 AGYDECDATCVNLPVPDY-ERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLK 293 + YD D+ + + ER T G+P +L + + +++ I L+ Sbjct: 243 SAYDAADSFSRQVQSSTWTERKWPAR---FTFGVPSASQLKFFDDMQAEGLFEEAIRKLE 299 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G + V + +P + ++ L Y G R+ ++ + + Sbjct: 300 KMGGQCVR-------------FDYTPFQETAELL-YSGPWVAERLAA---IQSFTDEHPG 342 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 V+ I+ + ++ + Y ++ L +R T+A Q +DV+L PT PT Sbjct: 343 AIHPVVRDIILSAQDMSAADAFRGSY----RLSELNRR--TQALWQQIDVMLLPTAPTI- 395 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E+ + + N +T VN+ L AI+VPA +P G+ IGQ F + T Sbjct: 396 --YTVEDMLTDPVCLNSNLGFYTNFVNLMDLSAIAVPAGFRPDGLPFGITFIGQAFEDGT 453 Query: 473 LFSVGQ 478 + S+G+ Sbjct: 454 IASLGK 459 >gi|169622569|ref|XP_001804693.1| hypothetical protein SNOG_14509 [Phaeosphaeria nodorum SN15] gi|160704800|gb|EAT78049.2| hypothetical protein SNOG_14509 [Phaeosphaeria nodorum SN15] Length = 585 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 123/478 (25%), Positives = 195/478 (40%), Gaps = 90/478 (18%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACS--HILDGFR----PHYESTVTQKLWDNGAVMLG 120 D+R L G + +KD + G+ + +L G P ++ V +++ ++G + G Sbjct: 121 DSR-LAGKTVAVKDNVSIAGVPLTGGTFPELLTGKSEYPIPQIDAVVVKRVLESGGTIKG 179 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA------ 174 N + F+M + TS GPV + W +T GGSS G A VA A Sbjct: 180 SANCEHFSMSPLSFTSASGPVHNAWLR-----GYTTGGSSSGCGAMVAAGQVRAWRKKNE 234 Query: 175 --------------SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 +IG D GGSIR PA++ G G+KPT+G GIIS P +D G Sbjct: 235 LKPNDEELGESVDMAIGGDQGGSIRIPAAYAGIYGLKPTHGLIPYTGIISLLPLVDHTGP 294 Query: 221 ITRTVRDSAILLKAIAGYDECDATC-----VNLPVPDYERALDQ---------------S 260 +T ++ D+A+LL +AGYD D C + V DY L++ + Sbjct: 295 MTTSLEDNALLLSVLAGYDGIDPRCTPETPLRQNVLDYPALLEEWRTEKETNGAWTPSSA 354 Query: 261 IQGMTVGIPKEYRLDY--LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 +G+ V I KE LD LS + + ++ GA + E+S+P + +IS Sbjct: 355 GRGLRVAIMKE-GLDVLGLSKEVKSVFHNAVAQFNAIGASVEEVSIPMHTLGPAIWTVIS 413 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY--- 375 A D L D L KH + +S Sbjct: 414 ---RPFIYAMPDVTPPSLDQNAFDTLN--------------KHNPAVANMFFNSAFMNEK 456 Query: 376 -DSHYLRARKIRTLIK-RDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH----- 428 D++ + A+ + + + RD + + D++LTP P K S +G Sbjct: 457 ADANAVLAKAMGHVQQLRDAYDEVLKVYDILLTPVNPRVG---SKHPELSADVGKKMEPA 513 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKK-----MPLGLQLIGQPFREETLFSVGQIIE 481 I + T N+ G PA+S+PA + +P+G+QL+ + F E + F E Sbjct: 514 IGATLNTCQFNVTGHPALSMPAGWAKAPEGPGMLPVGIQLVAKRFDEMSTFKAAAAWE 571 >gi|299533924|ref|ZP_07047287.1| amidase [Comamonas testosteroni S44] gi|298718094|gb|EFI59088.1| amidase [Comamonas testosteroni S44] Length = 225 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 8/217 (3%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMN--AYIEVVAQKARAAAEESDKRIINGDARD- 70 + L SAV+L + QA+E + + V+ ++A A A SD G AR Sbjct: 13 EHLAQGQTSAVQLTE---QALERATQGEGPRVFTRVLREQALAEARASDVLRAAGLARSP 69 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDEFAM 129 LEG+PI +KD F G T S +L P ++ V Q+L GAV++G NM EFA Sbjct: 70 LEGLPISVKDLFDIAGHPTLGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEFAY 129 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +PW+ D PGGSS G++ +V + A+IG+DTGGS+R P++ Sbjct: 130 SGLGLNPHYGTPRNPWQR-DIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVRIPSA 188 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 G G KPT R S G++ + +LD G + +VR Sbjct: 189 LCGLTGFKPTARRVSMQGVLPLSANLDSIGPLAPSVR 225 >gi|302548122|ref|ZP_07300464.1| amidase [Streptomyces hygroscopicus ATCC 53653] gi|302465740|gb|EFL28833.1| amidase [Streptomyces himastatinicus ATCC 53653] Length = 478 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 122/460 (26%), Positives = 211/460 (45%), Gaps = 52/460 (11%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 + +S VE+ D+ IE +NA+ ++R AA+ S+ R G+ ++G+P+ Sbjct: 13 RTLSPVEVHDAVQSVIEAREGVLNAFWVRDPDESRKAAQASEARWAAGEPLGPVDGVPVT 72 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +K+ A +G+ + + + P ++ +T ++ ++G V+LG M ++ M SS +S Sbjct: 73 LKENVARRGVPMPSGNAGTEPVVPEADAPITARVLESGGVILGSTVMPDWGMLSSGVSSR 132 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G SPW +T GGSS G+ AA AG +GTD GGSIR P ++ G +K Sbjct: 133 HGISRSPWNP-----DWTTGGSSSGAGAAAAGGYGPLHVGTDIGGSIRLPGTWLGLATLK 187 Query: 198 PTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE-R 255 P+YGR I AP L + AG +TRTV D+A+L++ ++ D D T +LP D + Sbjct: 188 PSYGR-----IPLDAPYLGRAAGPLTRTVADAALLMRVLSQPDPRDWT--SLPPQDIDWS 240 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 AL+ ++G+ VG+ +L+ ++ I + A++ E A Sbjct: 241 ALESEVRGLRVGV-------HLNAGCGESSDAEILAAVNRAAEVFEA----------AGA 283 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR-- 373 ++ P E D + LRV + + + G V +R Sbjct: 284 VVEPVEPFMTQELLDDLDLFLRVRSWNDFRALSPEARLRVHPHIIRWCQGGADVPGTRVL 343 Query: 374 -CYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE---ENNSGSMGH 428 CY ++A+ + + D +L+P P +AF + ++ +M H Sbjct: 344 QCYQQIMRIQAQTVAATVPYDL----------VLSPVAPVAAFSAEQPMPFSTDAKTMAH 393 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 I FT NM+G PA +V + P+G+Q+ G+ F Sbjct: 394 IG---FTAPYNMSGQPAATVNCGMTADGRPIGVQIAGRRF 430 >gi|269929138|ref|YP_003321459.1| Amidase [Sphaerobacter thermophilus DSM 20745] gi|269788495|gb|ACZ40637.1| Amidase [Sphaerobacter thermophilus DSM 20745] Length = 539 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 126/467 (26%), Positives = 206/467 (44%), Gaps = 61/467 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L + +E +R++++SAV+LV + ++ I ++ A+ + A +A A A E D Sbjct: 1 MTALYDLTATEIVRHVRARELSAVDLVTALLERIARLEPEIEAWATLGADEALAEAAERD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L G+PIG+KD G+ T A R ++ V +L GA++LG Sbjct: 61 RAAEAGQIGPLHGVPIGVKDIIDVAGMPTVAGFAPYRDRRADQDAHVVARLRAAGAIILG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K++ +FA P +PW + TPGGSS GS+AAVA + ++GT T Sbjct: 121 KVHTTQFAHADP------APTKNPWNA-----ARTPGGSSAGSAAAVAARMVPLALGTQT 169 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+ +PA++ GTVG KP+Y SR G+I A SLD G++ RTV D A+ AIAG Sbjct: 170 AGSVVRPAAYCGTVGFKPSYNWASRQGVIPLAWSLDHVGLLARTVEDIALAYDAIAGTQT 229 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 A + P + + E+ L+ P + L+ AGA + Sbjct: 230 DLAARRDTP--------------PRLVLLTEF-LERAEPDVRDHLLDVADRLRAAGASVE 274 Query: 301 EISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E +LP L + +I AE ++ V + ++ +G+ + Sbjct: 275 EGALPVDLDLWLAVHRVIMQAEVAA-------------VHAEQCARHPDD-----YGKLL 316 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + I +G + ++ YL + VD L P+ +A Sbjct: 317 RQEIEVGQLIPAA------YLLTAARLRRRIARAVDTALGEVDGYLLPSVSNAA----PR 366 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 N +G + F ++ G PAI++P L +PLG QL+ + Sbjct: 367 RNTTG------DRTFQAPWSLVGTPAITLPTGLNSDGLPLGTQLVAR 407 >gi|72384146|ref|YP_293500.1| amidase [Ralstonia eutropha JMP134] gi|72123489|gb|AAZ65643.1| Amidase [Ralstonia eutropha JMP134] Length = 440 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 28/306 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI-ENSNSQMNAYIEVVAQKARAAAEESD-KRIING 66 ++E L S ++V L ++ + I + + +A++ V + A A A +D R Sbjct: 6 IAELAASLASGRTTSVALTEAALANIARHEQAGGSAFMSVDVKGALAQARAADLARSAGY 65 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDG-FRPHYESTVTQKLWDNGAVMLGKLNMD 125 A L G+PI IKD F +G T+A S +LDG ++ +L GAV++G+ NM Sbjct: 66 VASPLAGLPISIKDLFDVRGQVTRAGSKVLDGSVPAPADAPAVARLRAAGAVLIGRTNMS 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA ++G +P+ + GGS+ G + +VA + A++GTDTGGSIR Sbjct: 126 EFAFSGLGLNPHFGTPRTPFDA-----SRIAGGSTSGGAVSVAEDMSVAALGTDTGGSIR 180 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++F G G KPT R G + + SLD AG + R+V C Sbjct: 181 IPSAFCGLTGFKPTARRVPLDGAVPLSTSLDSAGPLARSV-----------------GCC 223 Query: 246 VNLPVPDYERALDQS---IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 V + LD S ++ + + +++ D L P +++ + ++ L GA+I+ Sbjct: 224 VAMDAVLSGEVLDTSPTKLRELRFYVTRDFVCDSLDPEVEQAFDAALAKLSAHGARIIPF 283 Query: 303 SLPHTQ 308 P + Sbjct: 284 DFPELR 289 >gi|325568889|ref|ZP_08145182.1| amidase [Enterococcus casseliflavus ATCC 12755] gi|325157927|gb|EGC70083.1| amidase [Enterococcus casseliflavus ATCC 12755] Length = 483 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 135/523 (25%), Positives = 223/523 (42%), Gaps = 95/523 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 ++LR IS E V + + NS +NA + Q A E+ ++ + G G Sbjct: 9 EQLRQGQISFAERVAMIEEKVNQQNSLLNALVTFDPQAAIQHYEQHLQKTVFG------G 62 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 P+ +K TK G + + + R + +L + G V LG+ N EF + Sbjct: 63 QPMPLKILGQTKAGWPATSGAKLFAKARASRTAHFVSRLEEAGFVPLGQTNAPEFGFKNI 122 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S SSGG++AAVA + + +D GGSIR PASF+G Sbjct: 123 TDPTLYGPTRNPWNPAYSAGG-----SSGGAAAAVASGMFPIAGASDGGGSIRIPASFSG 177 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT G R + I+FA +T ++RD+ L A+ Sbjct: 178 LIGLKPTRGTMPVGPSEWRSWQGASINFA--------LTLSMRDTEQLFYAL----RTSQ 225 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGI----SWLKDAG 296 P E Q+ Q + + SPT + +T Q + ++L+ G Sbjct: 226 PAAPYQAPQVEWHHQQASQKPRLKV----AFTTASPTGGQVSETAIQAVRSAAAFLEKQG 281 Query: 297 AKIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVRY-GLRVEGKDIL--EMYENTRS 352 +++E+ P Q + YY ++ E ++ A D R +R E +++ +Y+ Sbjct: 282 HEVIEVGYPVDGQQMMTTYYAMNGGETAAMFAEIDAARQEPVRREEMELMTWALYQ---- 337 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +G+ ++ YVL+ + +D + E F D+ LTPTT Sbjct: 338 --YGK----KLPAADYVLALQWWDQ-----------LAEKMEEVFST-YDLFLTPTTAFP 379 Query: 413 AFPLGKEENNSGSM---------------GHIYNDVF---------TVAVNMAGLPAISV 448 A PL +E+ S S+ G + ++F T N+ G PAIS+ Sbjct: 380 A-PLIEEDLQSDSIRQRLHEIESLGKSAAGELIEEMFAKSYTLTPYTQLANLTGQPAISL 438 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P AL E+ +PLG+Q + RE+ LF VG + E + + P + Sbjct: 439 PTALSEEGLPLGIQFMASKGREDLLFQVGYLFETQQRFLLPKQ 481 >gi|226309382|ref|YP_002769342.1| amidase [Rhodococcus erythropolis PR4] gi|226188499|dbj|BAH36603.1| putative amidase [Rhodococcus erythropolis PR4] Length = 463 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 128/482 (26%), Positives = 202/482 (41%), Gaps = 53/482 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RS SA +V+ ++ I+ N ++NA + V A+ ARAAA+ D+R + G+ L G+ Sbjct: 18 VRSGQASARTVVEEHLARIDERNGELNALVTVCAEDARAAADSLDERRLLGETLGPLAGV 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD AT G+ T A S L P ++ GA+++GK N EF Sbjct: 78 PFTVKDLIATAGVRTTAGSRTLADNIPAVDAPAVAAFKAAGAILIGKTNTPEFGACGLTR 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G SP R D + G S G S++ AG + +GTD GGS+R PA TG Sbjct: 138 NELFGTTASPVRP-DGVVRSPGGSSGGESASVAAG-MSVLGLGTDFGGSVRWPAHCTGLT 195 Query: 195 GIKPTYGRCSR----LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 ++PT GR G++S L + T++ L + + DAT Sbjct: 196 SVRPTLGRIDPEGQFPGVLSDGRVLANPATMHGTIQTIGPLARNLG-----DATLA---- 246 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 R L + T P+ +++L D W G E ++P + Sbjct: 247 ---LRVLSKPHLAWTE--PESVDVEHL----DIRWAPG------------EGTMPVDEEI 285 Query: 311 LPAYYIISPAEASSNLARYDGV---RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 L A + A S + + YDG+ R +E + + S+ G H Sbjct: 286 LAA---VRSAANSLDASEYDGLALPRANALFGALRSVETHADIHSLAAGS--AHSFDADI 340 Query: 368 YVLSSRCYDSHYLRARKI---RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + + +D + R ++ DF E G DV++ P A PLG E G Sbjct: 341 TAMLAAGHDRSSAEVEALWADRAMLIADFLG--EMG-DVLILPVASVLAPPLGVESFEVG 397 Query: 425 SMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + D A+++ GLP++ VP L +P+G+Q++ +PF E SV I Sbjct: 398 GRELTWMDALASCRAISVLGLPSVVVPVGLSRNGLPVGVQVVARPFHEHVALSVAARIMS 457 Query: 483 EA 484 A Sbjct: 458 NA 459 >gi|148359896|ref|YP_001251103.1| amidase [Legionella pneumophila str. Corby] gi|296107947|ref|YP_003619648.1| amidase family protein [Legionella pneumophila 2300/99 Alcoy] gi|148281669|gb|ABQ55757.1| amidase (enantiomer selective) [Legionella pneumophila str. Corby] gi|295649849|gb|ADG25696.1| amidase family protein [Legionella pneumophila 2300/99 Alcoy] Length = 469 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 133/531 (25%), Positives = 220/531 (41%), Gaps = 112/531 (21%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIE-VVAQKARAAAEES 59 M ++ ++ +E R++ K++SA E++ +++ I+ N +NA E + ++ A+E Sbjct: 1 MDAIHLLSATEIIRRIKMKELSAAEVMVAHLNHIDKINPVINALTERIPPEECLKQAKEI 60 Query: 60 DKRIING-DARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 DK I + + L G+P+ IKD KG I + ACS G + ++T+ +L GA+ Sbjct: 61 DKSIASKKNLNKLMGLPVAIKDALYVKGLICSSACSGFYKGEKAARDATLVSRLKKEGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LG N+ E G ++ YG +P+ T GGSSGGS+A +A ++G Sbjct: 121 ILGLTNVPELCRGGDSDNLIYGRTNNPYDLAR-----TSGGSSGGSAALIAAGGVPFALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG------------IISFAPSLDQAGIITRTV 225 +D GGS+ QPA G V +KPT+G G +ISF P + R+V Sbjct: 176 SDGGGSLMQPAHCCGIVALKPTHGHLPHTGSVGGDSYGLIGNLISFGP-------MARSV 228 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERA-----------------LDQSIQGMT--- 265 D + L +AG D+ D PVP A +D IQ + Sbjct: 229 SDLRLGLSVLAGSDQYDP--YTNPVPVMPAAPLKKLRVAYFTENGFTPVDVEIQNVVKSA 286 Query: 266 -------VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 V I +E R D +S D W+ + AG K + L Sbjct: 287 ALALQDDVAIVREVRPDCVSKAFDLHWELFLGGDCGAGFKTMLSEL-------------- 332 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 GV L E ++ L E T+ F H+ Sbjct: 333 ------------GVN-NLSWELQEFLRQAEQTQ---FSVTQLHQ---------------- 360 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 R R+I R F Q DV+++P PT A P G + I + + + Sbjct: 361 --RMREIDLF--RLELALFMQDYDVLISPVFPTVAKPHGI------GIKEISDFSYAMTH 410 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 N++G P IS+ + +P+ + + +++ T +V + +E+ G ++P Sbjct: 411 NLSGFPTISLRCGASAEGLPINILIAANRWKDTTSLAVAERLEQLMGGYKP 461 >gi|33600493|ref|NP_888053.1| putative amidase [Bordetella bronchiseptica RB50] gi|33568092|emb|CAE32005.1| Putative amidase [Bordetella bronchiseptica RB50] Length = 460 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 213/480 (44%), Gaps = 81/480 (16%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S + + V + + + +S+ + + ++ I + N + A++ V A KA A D+ Sbjct: 30 SRIAALTVEQGLREMEAGKLSSEQWTQACLERIASRNPVVKAWVYVNADKALERARLVDR 89 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G + L+G+P+G+KD T + T+ I G RP ++ VT+ + + G V+LG Sbjct: 90 ---EGRRQRLDGVPLGLKDIIDTADMPTELGDPEIFPGRRPAEDAAVTRLMRELGVVLLG 146 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + S + GP +P TPG SS GS+AAVA F S+GT T Sbjct: 147 KNTV------SRHSIMLPGPARNP-----HDPSRTPGASSAGSAAAVADFQTPISLGTQT 195 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSI +P++F G VG KPT G+ ++ LD G I R+V D +IL G Sbjct: 196 GGSIVRPSTFCGAVGFKPTIDTLPYAGLRRYSRPLDTLGAIARSVADLSILFGEALGD-- 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 P D E A+ + TVG+ + D P + + + ++ L+ AG ++ Sbjct: 254 --------PRFDSELAVRRD---FTVGVWRPLGWDDAEPCVREAFDDAVARLQQAGVRVK 302 Query: 301 EISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + +P TQ A + DI+ Y+ RS +E Sbjct: 303 VLDMPKIFTQIA----------------------------DDHDIIMAYDLARSF---KE 331 Query: 359 VK--HRIMIGTYVLS-----SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ H +L R Y R + +R F + + VDV+ TP T Sbjct: 332 IRRDHHDKCDPALLEYLDKGDRDTAQDYARTLDLADACRRAFLDV-ARDVDVLATPAT-- 388 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 LG+ + S + +I+ ++T+ N P++++P A + +P+GLQL+G F++E Sbjct: 389 ----LGEAPDVSDTGSNIFIRIWTLLHN----PSLTLPIARGPRGLPVGLQLVG--FQKE 438 >gi|254239080|ref|ZP_04932403.1| hypothetical protein PACG_05262 [Pseudomonas aeruginosa C3719] gi|126171011|gb|EAZ56522.1| hypothetical protein PACG_05262 [Pseudomonas aeruginosa C3719] Length = 464 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 125/505 (24%), Positives = 204/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPGEYYEHLLAHIQRWEPHLNALYRFDPQRVREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPAPCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + V D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEVLDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D++ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRSLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|163759779|ref|ZP_02166863.1| Amidase [Hoeflea phototrophica DFL-43] gi|162282737|gb|EDQ33024.1| Amidase [Hoeflea phototrophica DFL-43] Length = 446 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 14/237 (5%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 +S+V+LV + + IE S + A+ + A KA + A E D+ G A L GIP+ +K Sbjct: 22 VSSVDLVKACLARIEQSGPSIQAWAHLDADKALSQAAEMDRIRRAGFALGALHGIPVALK 81 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYY 138 D T + T+ + I +P ++ + ++L D GAV++GK E A + S+ + + Sbjct: 82 DIVDTADMPTERGTPIFKDRQPDRDAAIVERLRDAGAVIMGKTVTTELAFLNPSHTRNPH 141 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 P + TPGGSS GS+AAVA SIGT T GS+ +PASF G G KP Sbjct: 142 NP------------QHTPGGSSSGSAAAVAAHHVPLSIGTQTNGSVIRPASFCGVYGFKP 189 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 + G SR GI+ + SLDQ G+ R++ D A+L A+ YD+ D P P R Sbjct: 190 SRGIISRRGILQTSVSLDQVGVFARSLGDVALLSDALGSYDQSDPVSFPRPRPAMAR 246 Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust. Identities = 14/44 (31%), Positives = 28/44 (63%) Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + +F +AGLP++++P + E +P+G+QLIG +++ L Sbjct: 388 DPIFCTLWTLAGLPSVTLPLLVGENSLPIGVQLIGPAEKDDRLL 431 >gi|158423597|ref|YP_001524889.1| putative amidase [Azorhizobium caulinodans ORS 571] gi|158330486|dbj|BAF87971.1| putative amidase [Azorhizobium caulinodans ORS 571] Length = 492 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 137/482 (28%), Positives = 213/482 (44%), Gaps = 56/482 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R+ ++ +A V+ ++ I + A+I V A AR A E D + L G+ Sbjct: 46 RIATRACTASAAVEEHLARIAALEPHLKAFITVDADGARRRARELD--VSPQRQGPLHGL 103 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD T+G+ T S G P + V +L GAV++GK N EF G+ Sbjct: 104 PVAIKDLTRTRGLRTTFGSRAFAGEVPEADDPVVARLRRAGAVIIGKTNTPEFGFGAVCV 163 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 GP +P+ + T GGSSGGS+ AVA + A + GTD GGS+R PASF G V Sbjct: 164 NDLQGPTANPYDLV-----LTSGGSSGGSAVAVATGMSALAHGTDFGGSVRTPASFCGVV 218 Query: 195 GIKPTYGRCS----RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 I+P G + LG A G + R+V D+A+LL+A+A + D L Sbjct: 219 SIRPAIGVIADPDRELGWTGLA----THGAMGRSVADAALLLQAMAAPNAYDPLSTAL-- 272 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 A V + ++ + + + + + + + ++ ++VE + P A Sbjct: 273 -----AAGPDAPPRRVAVTPDFAVAPVCKAVRRRFARAVDEMRAVVGEVVEAT-PDCAGA 326 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A+ + A+ +AR YG V+G + ++ + E + Y Sbjct: 327 PLAFRTLRAAQ----IART----YGAFVDGN-----VPVSPTVRWNVEAARSLTAQDY-- 371 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM-GHI 429 L A RT + R FT FEQ DV++TP S P E M G Sbjct: 372 ---------LAAEAARTALWRRFTRFFEQ-YDVLVTPA--ASVLPWPNAEGERMEMDGRS 419 Query: 430 YNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 D+ T V++ G P +++PA ++P GLQLIG+P E L ++ +E EA Sbjct: 420 LADILDYLTITFIVSLVGFPVVTLPAPRQPGEVPFGLQLIGRPGAEAALIALAARLEGEA 479 Query: 485 GY 486 G+ Sbjct: 480 GF 481 >gi|86360394|ref|YP_472282.1| putative amidase protein [Rhizobium etli CFN 42] gi|86284496|gb|ABC93555.1| putative amidase protein [Rhizobium etli CFN 42] Length = 603 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 125/451 (27%), Positives = 201/451 (44%), Gaps = 63/451 (13%) Query: 46 EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 E + +ARA E R + ++ L GIP +KD G+ T A +RP ++ Sbjct: 48 EALRGEARALME----RAPDPNSLPLWGIPFAVKDNIDVAGLPTTAACPTFS-YRPEKDA 102 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 TV +L GA+++GK N+D+FA G + S YG +P D + GGSS GS+ Sbjct: 103 TVVARLRAAGAIVIGKTNLDQFATGLNGTRSPYG---APRSVFDK--NYVSGGSSSGSAV 157 Query: 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV 225 AVA L + ++GTDT GS R PA+F VGIKPT G +G++ S+D + TV Sbjct: 158 AVASGLASFALGTDTAGSGRVPAAFNNLVGIKPTPGLVPNVGVVPACRSVDVVTVFAATV 217 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI--QGMTVGIPKEYRLDYL-SPTID 282 D + K + GYD D P +A+ S+ G+ +G+ ++ + ++ Sbjct: 218 GDGVTIRKVMEGYDAAD--------PFSRKAVPSSLPASGLRIGVLDGAEREFFGNRQVE 269 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-K 341 + I +D GA IV + +P ++ L Y+G R+ K Sbjct: 270 ALYDAAIERARDLGATIVA-------------FDYAPFRQAAELL-YNGPWVAERLAAVK 315 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 D L T + F V+ T + ++ YD+ + + R T + Sbjct: 316 DFLA----TNATDFEPTVR------TIIEGAKAYDAVAAFEGRYKLEALRQKTGKEWEKA 365 Query: 402 DVILTPTTPTS-------AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAAL-C 453 D+++ PT+PT+ A P+ K +G G +T VN+ AI+VPA Sbjct: 366 DLLMLPTSPTTYTVEEMLADPIVK----NGHFGR-----YTNFVNLLDCAAIAVPAGFDA 416 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + +P G+ LIG F ++ L + + A Sbjct: 417 DGHLPAGVTLIGPAFTDDALARFADAMHRTA 447 >gi|218679185|ref|ZP_03527082.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Rhizobium etli CIAT 894] Length = 89 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 50/89 (56%), Positives = 63/89 (70%) Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 +TP TP+SAF + E+ + + ND+FTV VNMAGLP I+VPA L +K +PLGLQLI Sbjct: 1 MTPATPSSAFGIADEDLAADPVKMYLNDIFTVTVNMAGLPGIAVPAGLDQKGLPLGLQLI 60 Query: 465 GQPFREETLFSVGQIIEKEAGYFRPHKWW 493 G+PF EETLF +IE+ AG F P KWW Sbjct: 61 GKPFDEETLFKTAHVIEQAAGRFTPAKWW 89 >gi|313105533|ref|ZP_07791801.1| putative amidase [Pseudomonas aeruginosa 39016] gi|310878303|gb|EFQ36897.1| putative amidase [Pseudomonas aeruginosa 39016] Length = 464 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 125/505 (24%), Positives = 204/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPSEYYEHLLAHIQRWEPHLNALYRFDPQRIREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPATCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + V D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEVLDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D++ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRSLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|330815869|ref|YP_004359574.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase [Burkholderia gladioli BSR3] gi|327368262|gb|AEA59618.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase [Burkholderia gladioli BSR3] Length = 458 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 126/476 (26%), Positives = 200/476 (42%), Gaps = 57/476 (11%) Query: 26 LVDSYIQAIENSNSQMN-AYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFA 83 LVD+ + I + Q + A+ V + AR A+ D+ G L GIP+ +KD F Sbjct: 27 LVDTALARIAAPDGQGSIAFTGVDVEAARTTADAHDRLRTAGTVLSPLAGIPVSVKDLFD 86 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 G T+A S LD P +L GAV++G+ NM EFA +YG Sbjct: 87 IAGQRTRAGSRALDDAAPASADAPAVARLRRAGAVIVGRTNMSEFAFSGLGLNPHYGTPR 146 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 SP+R + + GGSS G++A+VA + A ++GTDTGGSIR PA+ G G KPT R Sbjct: 147 SPYRREVAGEARITGGSSSGAAASVADGMAAVALGTDTGGSIRIPAALCGLTGFKPTASR 206 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 R G + + +LD G I +V A++ + +AG P A + ++ Sbjct: 207 VPRSGGVPLSTTLDSFGPIGVSVACCALVDRILAGL-----------APRVPAA--RPLE 253 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 G+ +G+ Y D + + + L+ AGA + ++ +P + Sbjct: 254 GVRLGVLNHYVTDGMDAEVGAAFDAARRHLEAAGAIVSDLRF-------------APLDR 300 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRIMIGTYVLSSRCYD 376 + R+ G +E Y R + + V RI+ G + Sbjct: 301 LPEINRF----------GFSPIEAYAWHRPLLADRRDQYDPRVLARILKGETASA----- 345 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF-- 434 + YL R + + + VD +L PT P + + E + + G + Sbjct: 346 ADYLDLIAARAAMLDEAEQTLWSRVDAVLAPTVPVVPPRIAELEADDEAFGRTNALILRN 405 Query: 435 TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 A N A+SVP C + P+GL L P R++ L ++GQ +E R Sbjct: 406 PSAFNFLDACALSVP---CHPRDTAPVGLMLAAGPHRDDALLAIGQAVEAVLAAIR 458 >gi|323528481|ref|YP_004230633.1| Amidase [Burkholderia sp. CCGE1001] gi|323385483|gb|ADX57573.1| Amidase [Burkholderia sp. CCGE1001] Length = 513 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 139/493 (28%), Positives = 223/493 (45%), Gaps = 78/493 (15%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + E R + +K+IS VEL+D+ I+ IE N +NA ARAAA+ +++ Sbjct: 10 NELVGRSAVELRRMIGAKEISPVELLDACIERIEAVNPAVNAITATDFPAARAAAKRAEQ 69 Query: 62 RIINGDARDLEGIPIG-IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++++G+ L +KD T G+ T S + G P + + ++L GA++ Sbjct: 70 QVLDGEPLGLLHGLPLGVKDLENTAGLLTTYGSPMSRGNVPTQDVVLVERLRAAGAIVTA 129 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E G++ +G +P+ + GGSSGGS+AA+A + G+DT Sbjct: 130 KTNVPELGAGANTRNPVWGATGNPFNT-----ALNAGGSSGGSAAALACDMLPVCTGSDT 184 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PAS G VG +PT G + ++ ++P + G + RTV ++ + L A AG Sbjct: 185 GGSLRIPASKCGVVGFRPTPGLVPNSRKLVGWSP-ISVVGPMGRTVAEACLQLAATAGIS 243 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D L + + P + L L + W +D G+ Sbjct: 244 AGDP-------------LSFPVDPLGFAAPADIDLSTLR----------VGWTEDFGSCD 280 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYD---------GVRYGLRVEG------KDIL 344 V+ S+ Q +I+P+ S R+D +R V G +D Sbjct: 281 VDASI--RQLFRERMALIAPSFRSCEEVRFDLGDVHRCFDVIRAESFVAGLHDAYTRDPN 338 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 ++ NTR+ E+ R+ + DS + +A + R I + F AF Q DVI Sbjct: 339 QLGPNTRA---NYELGARMSLA---------DSAWAQAEQTR--IFKRFQAAFRQ-YDVI 383 Query: 405 LTPTTPTSAFPL---------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 L+PTTP S FP G+E++N + T V + PA+S+P L Sbjct: 384 LSPTTPVSPFPWQQLYAAQIGGREQDN-----YYRWLALTYVVTLTTHPAVSLPCGLDHA 438 Query: 456 KMPLGLQLIGQPF 468 MP GLQ++G PF Sbjct: 439 GMPFGLQIVG-PF 450 >gi|295667693|ref|XP_002794396.1| amidase family protein [Paracoccidioides brasiliensis Pb01] gi|226286502|gb|EEH42068.1| amidase family protein [Paracoccidioides brasiliensis Pb01] Length = 560 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 126/243 (51%), Gaps = 14/243 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ + + + + L + + +LV++Y + I+ N + A I+ A A A AE DK Sbjct: 36 DIQVLTIPQLQKCLTERKFFSRDLVETYFERIQILNCLLKAVIQTNAD-ALAIAECLDKE 94 Query: 63 IINGDARD-LEGIPIGIKDCFATK-GIHTQACSH-ILDGFRPHYESTVTQKLWDNGAVML 119 NG R L GIP +KD ATK G+ T A S +L G ++ V L D GA++L Sbjct: 95 RENGKLRGPLHGIPFLVKDNIATKDGVATTAGSTTVLVGTTVPDDAHVVSLLRDAGAILL 154 Query: 120 GKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G N+ E+A S +S G +P+ + PGGSS GS+ AVA +C Sbjct: 155 GHTNLSEWAAMRSSYYSEGYSSRGGQCRNPYNLAEH-----PGGSSCGSAVAVATNMCPF 209 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+GT+T GSI PA VGIKPT G S G+I + SLD G +TV D+AI L A Sbjct: 210 SLGTETDGSIMFPADRNAVVGIKPTVGLTSTKGVIPESSSLDTVGSFGKTVLDAAIALDA 269 Query: 235 IAG 237 I G Sbjct: 270 ITG 272 >gi|54295197|ref|YP_127612.1| hypothetical protein lpl2277 [Legionella pneumophila str. Lens] gi|53755029|emb|CAH16517.1| hypothetical protein lpl2277 [Legionella pneumophila str. Lens] Length = 469 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 133/531 (25%), Positives = 223/531 (41%), Gaps = 112/531 (21%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIE-VVAQKARAAAEES 59 M ++ ++ +E R++ K++SA E++ +++ I+ N +NA E + ++ A+E Sbjct: 1 MDAIHLLSATEIIRRIKMKELSAAEVMVAHLNHIDKINPVINALTERIPPEECLKRAKEI 60 Query: 60 DKRIING-DARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 DK I + + L G+P+ IKD KG I + ACS G + ++T+ +L GA+ Sbjct: 61 DKSIASKKNLNKLMGLPVAIKDALYVKGLICSSACSGFYKGEKAVRDATLVSRLKKEGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LG N+ E G ++ YG +P+ T GGSSGGS+A +A ++G Sbjct: 121 ILGLTNVPELCRGGDSDNLIYGRTNNPYDLAR-----TSGGSSGGSAALIAAGGVPFALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG------------IISFAPSLDQAGIITRTV 225 +D GGS+ QPA G V +KPT+GR G +ISF P + R+V Sbjct: 176 SDGGGSLMQPAHCCGIVALKPTHGRLPHTGSVGGDSYGLIGNLISFGP-------MARSV 228 Query: 226 RDSAILLKAIAGYDECDATCVNLPVPDYERA-----------------LDQSIQGMT--- 265 D + L +AG D+ D PVP A +D IQ + Sbjct: 229 SDLRLGLSVLAGSDQYDP--YTNPVPVMPAAPLKKLRVAYFTENGFTPVDAEIQNVVKSA 286 Query: 266 -------VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 V I +E R D +S + W+ + + AG K + L Sbjct: 287 ALALQDDVAIVREVRPDCVSKAFELHWELFLGGDRGAGFKTMLSEL-------------- 332 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 GV L E ++ L E T+ F H+ Sbjct: 333 ------------GVN-NLSWELREFLRQAEQTQ---FSVTQLHQ---------------- 360 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 R R+I L + +F F Q DV+++P PT A P G + I + + + Sbjct: 361 --RMREI-DLFRLEFA-LFMQDYDVLISPVFPTVAKPHGI------GIREISDFSYAMTH 410 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 N++G P IS+ + + + + + +++ T +V + +E+ G + P Sbjct: 411 NLSGFPTISLRCGTSAEGLSINVLIAANRWKDTTSLAVAERVEQLMGGYNP 461 >gi|226291950|gb|EEH47378.1| amidase family protein [Paracoccidioides brasiliensis Pb18] Length = 560 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 126/244 (51%), Gaps = 14/244 (5%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +++ + + + + L + + +LV++Y + I+ N + A I+ A A AE DK Sbjct: 35 TDIQVLTIPQLQKCLTERKFFSRDLVETYFERIQRLNCLLKAVIQTNAD-ALVIAECLDK 93 Query: 62 RIINGDAR-DLEGIPIGIKDCFATK-GIHTQACSH-ILDGFRPHYESTVTQKLWDNGAVM 118 NG R L GIP +KD ATK G+ T A S +L G ++ V L D GA++ Sbjct: 94 ERENGKLRGPLHGIPFLVKDNIATKDGVATTAGSTTVLVGSTVPDDAHVVSMLRDAGAIL 153 Query: 119 LGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 LG N+ E+A S +S G +P+ + PGGSS GS+ AVA +C Sbjct: 154 LGHTNLSEWAAMRSSYYSEGYSSRGGQCRNPYNLAEH-----PGGSSCGSAVAVATNMCP 208 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 S+GT+T GSI PA VGIKPT G S G+I + SLD G +TV D+AI L Sbjct: 209 FSLGTETDGSIMFPADRNAVVGIKPTVGLTSTKGVIPESSSLDTVGSFGKTVLDAAIALD 268 Query: 234 AIAG 237 AI G Sbjct: 269 AITG 272 >gi|284993333|ref|YP_003411888.1| amidase [Geodermatophilus obscurus DSM 43160] gi|284066579|gb|ADB77517.1| Amidase [Geodermatophilus obscurus DSM 43160] Length = 472 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 131/490 (26%), Positives = 208/490 (42%), Gaps = 45/490 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +E +R + +SA EL D+ ++ IE + Q+NA + + A+ ARAAA+ +D Sbjct: 7 ELCLRPATELAALIRCQQLSARELTDACLERIERLDGQVNAVVTLDAEGARAAADAADAA 66 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ L G+P+ KD T G+ T S + D P + V +L G V +GK Sbjct: 67 LAAGEDVGPLHGLPVAHKDTHVTGGMRTTWGSPLADTV-PADDELVVARLRAAGTVRIGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA GS +G +P+R S + G ++ ++ V + G+D G Sbjct: 126 TNVPEFAAGSHTFNPLFGVTHNPYRHGLSAGGSSGGAAAALAAGLV-----PVAEGSDFG 180 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+R PA+F VG++PT GR L G + RTV D A++L AIAG D Sbjct: 181 GSLRNPAAFCNVVGLRPTPGRVPTWPAAMAWSQLSVQGPMGRTVADVALVLSAIAGPDRR 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEY----RLDYLSPTIDKTWQQGISWLKDAGA 297 ++ P + L + + G+ V + R+D P I + ++ ++ GA Sbjct: 241 VPISLDDPGAPFAAPLPERLDGLRVAWAPDLGGRVRVD---PAITAVLAESVAVFEELGA 297 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 VE P +L+ D V LR D + R Sbjct: 298 T-VETDCP-------------------DLSGADDVFGTLRAWVFDATFSDLDRR---HPD 334 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 ++K I L + + RA T + F++ DV+L PTT FP+ Sbjct: 335 QLKESIRWNA-ALGAELTGADIARAEMAHTALYERVVAFFDR-YDVLLAPTTQVLPFPV- 391 Query: 418 KEENNSGSMGHIYNDVFT-----VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 + E + G D + G PA+SVP +P+GLQ++ P + Sbjct: 392 EAEYPTEIDGEPLADYLAWMRSCTLITPTGCPALSVPGGFTPDGLPVGLQVVAPPRADRR 451 Query: 473 LFSVGQIIEK 482 + VG E+ Sbjct: 452 VLEVGHAFEQ 461 >gi|119505722|ref|ZP_01627791.1| probable amidase [marine gamma proteobacterium HTCC2080] gi|119458432|gb|EAW39538.1| probable amidase [marine gamma proteobacterium HTCC2080] Length = 489 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 129/496 (26%), Positives = 214/496 (43%), Gaps = 57/496 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVA--QKARAAAEESDKRIINGDARDL 71 D L S ++SAV L+ I N ++NA +V Q AA D R L Sbjct: 23 DALSSGELSAVSLMQKTYDRIAQENPRINAICTLVPLEQSLEAAQRVDDARKAGQTLPKL 82 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P+ IKD T+GI T S I P +S +L D G +++GK N EF GS Sbjct: 83 AGLPLAIKDLADTQGILTTQGSPIHARQIPDVDSLFVSRLKDAGGIIIGKTNTPEFGAGS 142 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +G +P+ + T GGSSGG++AA+A + A + G+D GGS+R PA+F Sbjct: 143 HTFNPLFGVTRNPFDP-----QKTAGGSSGGAAAALASGMVALADGSDMGGSLRNPAAFC 197 Query: 192 GTVGIKPTYGRCSRLGII--SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 VG++P+ GR + +F+ + G + RTV D A++L+ +AG D+ D +++ Sbjct: 198 NIVGLRPSMGRIPTIPKTQETFS-RMAVEGPMARTVEDCAMMLRVMAGADKRDPRSLDMG 256 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL--KDAGAKIVEISLPHT 307 + L + P+ RL W + L + A + ++ +L Sbjct: 257 ALNTSPTLTDA--------PENLRL---------AWAPNPAGLPIEPAVSSVLGAALLDM 299 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 Q+ PA I +E + ++ +R EG L + V I +G Sbjct: 300 QHLYPAIEEIDLSELKGAMEIFNVLRAAAFAEGLGYLYHSHQGK---MKATVIDNIKLGL 356 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--------PLGKE 419 + S + RA + T F++ D +L P T F + KE Sbjct: 357 ELTSDSLAQAEAQRAS-----LYHGMTSLFDR-FDYLLLPVTQVMPFQVELEYPTTINKE 410 Query: 420 ENNSGSMGHIYNDVFTVAVNMA--GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 NS Y D + ++ +P +S+PA +P+GLQ++G+P + + + Sbjct: 411 VMNS------YIDWMSSCCILSPFDVPCLSIPAGFNPDGLPVGLQIVGRPGDDWGVLRLA 464 Query: 478 QIIEKEAGYFR---PH 490 ++ G+++ PH Sbjct: 465 YAFQQHTGHWQQPPPH 480 >gi|329940481|ref|ZP_08289762.1| amidase [Streptomyces griseoaurantiacus M045] gi|329300542|gb|EGG44439.1| amidase [Streptomyces griseoaurantiacus M045] Length = 482 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L ++IS+ EL+D ++ I+ S Q+NA + ARA A +D+R ++ L+G+ Sbjct: 17 LDRREISSRELLDLHLAQIDAS--QINAVVTRDDSTARAVAHAADERRARNESTGILDGL 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD F T G+ T + + L P +++ +L GAV++GK N + + Sbjct: 75 PLTIKDSFETAGLRTTSGAEDLADHVPAHDADAVARLRHQGAVIMGKTNTPAYCQDLHTD 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +GP ++P K T GGSSGG +AAVA L A +G+D GS+R PA + G Sbjct: 135 NVLFGPTLNP-----HDPKRTTGGSSGGPAAAVAARLTPADLGSDLAGSLRLPAHYCGVY 189 Query: 195 GIKPTYGRCSRLGIISFAP 213 G++PT G G + P Sbjct: 190 GLRPTQGLIPARGHVPRPP 208 >gi|228900542|ref|ZP_04064765.1| Amidase [Bacillus thuringiensis IBL 4222] gi|228859093|gb|EEN03530.1| Amidase [Bacillus thuringiensis IBL 4222] Length = 536 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 219/506 (43%), Gaps = 80/506 (15%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM---TVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 E D + D ER D SI G+ +G+ + +D ++ L+ Sbjct: 308 EKDVMTEKM--KDKERINYTKDLSIDGLKGKKIGLL--FSVDQQDENRKTVAEKIKKDLQ 363 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT--- 350 DAGA + + YI NL + Y + D L +N Sbjct: 364 DAGAILTD-------------YIQLNNGGVDNLQT---LEYEFKHNVNDYLSQQKNVPVK 407 Query: 351 ---RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA--------FE 398 + F ++ K RI G ++ + + + +++ A E Sbjct: 408 SLEEILAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQANAKKELDRYLVE 465 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 QG+D ++ I ND ++ +AG P ++VPA + P Sbjct: 466 QGLDALVM----------------------INNDEVLLSA-VAGYPELAVPAGYDKNGEP 502 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEA 484 +G+ +G+ F E LF++G E+++ Sbjct: 503 IGVVFVGKQFGERELFNMGYAYEQQS 528 >gi|296502545|ref|YP_003664245.1| glutamyl-tRNA(Gln) amidotransferase [Bacillus thuringiensis BMB171] gi|296323597|gb|ADH06525.1| glutamyl-tRNA(Gln) amidotransferase [Bacillus thuringiensis BMB171] Length = 458 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 122/471 (25%), Positives = 211/471 (44%), Gaps = 57/471 (12%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH-T 89 IQ + + +N+ E+ A + +R N ++ +L GIP+ +KD T+ + T Sbjct: 20 IQEHDQNGITLNSVTEINPNAMEEARKLDQERGRNKNS-NLYGIPVVVKDNVQTEKVMPT 78 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISP 144 A +++L + ++T+ ++L + GA +LGK NM E+A S + G ++P Sbjct: 79 SAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNP 138 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + + F GSS GS+ VA +IGT+T GSI PA+ VG++P+ G S Sbjct: 139 YGPI----TFDTSGSSSGSATVVAADFAPLAIGTETTGSIVAPAAQQSVVGLRPSLGMVS 194 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP---DYERALD-QS 260 R GII A +LD AG + RTV+D A L A+ GYDE D + DY + L Sbjct: 195 RTGIIPLAETLDTAGPMARTVKDVATLFNAMIGYDEKDVMTEKMKDKERIDYTKDLSIDG 254 Query: 261 IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 ++G +G+ + +D ++ L+DAGA + + I A Sbjct: 255 LKGKKIGLL--FSVDQQDENRKIVVEKIRKDLQDAGAILTD-------------NIQLSA 299 Query: 321 EASSNLARYDGVRYGLRVEGKDILEMYENT------RSIGFG-QEVKHRIMIGTYVLSSR 373 E NL + Y + D L +N I F ++ K RI G ++ Sbjct: 300 EGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSLEEIIAFNKKDSKRRIKYGQTLIEGS 356 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 + + + +++ A ++ +D L E ++ I ND Sbjct: 357 --EKSAITKEEFENVVQTSQENARKE-LDRYLV-------------EKGLDALVMINNDE 400 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ++ +AG P ++VPA + P+G+ +G+ F E+ LF++G E+++ Sbjct: 401 VLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQFGEKELFNIGYAYEQQS 450 >gi|159028080|emb|CAO87157.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 465 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 127/482 (26%), Positives = 206/482 (42%), Gaps = 51/482 (10%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA----EESDKRIING 66 E +R+K IS +EL Y+ IE + Q+ +++ V + A A A E+ + Sbjct: 12 ELAQLIRTKQISPLELTHLYLDRIEKFDFQIGSFVHVAGESALATASIQTEQLSQIAATA 71 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + G+P IKD A G+ L G Y+ + ++ G ++LGK + Sbjct: 72 ELPPFFGVPTAIKDLNAVAGMPVSYGVAALQGNIAQYDEGIVTRMKMAGFILLGKTATSQ 131 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 E + P +P+ +T GGSSGG++AAVA C + G+D GGSIR Sbjct: 132 LGSFPYTENPGFLPTRNPFNR-----DYTAGGSSGGAAAAVAAGFCPIAQGSDGGGSIRT 186 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA G VGIKP+ GR S + F + G +++TV D A LL I+GY D + Sbjct: 187 PAGCCGLVGIKPSRGRVSYAPVGEFQSGIAANGTLSKTVADGAALLTVISGYTTGDPYWL 246 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA---GAKIVEIS 303 P + A + ++ + + +SP + + S K+A AKI+E Sbjct: 247 PDPPFSFLEATQRGVKPLRIAFSTS-----ISP-----FGEAASVYKNAVLETAKILEGM 296 Query: 304 LPH-TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 H T+Y+ +I P R+ T + +E+ Sbjct: 297 GHHLTEYSPDLQALIPPFR---------------RI-------WQAGTAAAAIPRELLSP 334 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN- 421 + ++L + YL+A + +I R F+ DV+L P +G+ EN Sbjct: 335 --LNQWLLDNSGSAGEYLQAVQQMHVISRQIVAMFDN-FDVLLLPIFLHQPPRIGEWENL 391 Query: 422 --NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 I + N +GLPAI++P L + +P+G+QL+G+P E TL + Sbjct: 392 PPEEAVNRMIAWIAPSPIANASGLPAIALPTGLDSQGLPVGIQLVGKPADEITLLGLSAQ 451 Query: 480 IE 481 +E Sbjct: 452 LE 453 >gi|147861788|emb|CAN80904.1| hypothetical protein VITISV_016633 [Vitis vinifera] Length = 522 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 45/314 (14%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARD 70 S+++L S+ +LVD Y+ IE N ++ + IEV AR A+++D I + + + Sbjct: 35 SQNKLTSR-----QLVDFYLHQIEALNPELRSVIEV-NPDAREQADKADAEIKSKKELGE 88 Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD TK ++T A S+ L G ++ V ++L GAV+LGK +M E+ Sbjct: 89 LHGIPVLLKDSINTKDKLNTTAGSYALLGAEVSGDAAVVERLRKAGAVILGKASMSEWYQ 148 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC---------------AA 174 +RS+ + + + P G + +G C A Sbjct: 149 ---------------FRSLKTRNGWCPRSGQGVNPYVASGEPCGSSSGSAVSVAANMVAV 193 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+GT+T GSI PA VG KPT G SR G+I +P D G I R+V D+ +L A Sbjct: 194 SLGTETDGSIICPADVNSVVGFKPTVGLTSRAGVIPISPRQDSVGPICRSVLDAVYVLDA 253 Query: 235 IAGYDECDATCVN-----LPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQ 287 I G+D D +PV Y++ L++ I G +G+ + + Y T ++ Sbjct: 254 IVGFDPRDGEATKEASKFIPVGGYKQFLNKDGIAGKRLGVVRNPFSGFYNRSTAISAFEA 313 Query: 288 GISWLKDAGAKIVE 301 ++ L+ GA +V+ Sbjct: 314 HLTVLRQRGAILVD 327 >gi|228920655|ref|ZP_04083999.1| Amidase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839020|gb|EEM84317.1| Amidase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 536 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 221/502 (44%), Gaps = 72/502 (14%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNTMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ +++I + E FE V Sbjct: 410 EEIIAFNKKDSKGRIKYGQTLIEGSE-----------KSVITK---EEFENVVQ------ 449 Query: 409 TPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 TS KE E ++ I ND ++ +AG P ++VPA + P+G+ Sbjct: 450 --TSQENARKELDRYLVEKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVV 506 Query: 463 LIGQPFREETLFSVGQIIEKEA 484 +G+ F E+ LF++G E+++ Sbjct: 507 FVGKQFGEKELFNLGYAYEQQS 528 >gi|116491497|ref|YP_811041.1| amidase [Oenococcus oeni PSU-1] gi|116092222|gb|ABJ57376.1| Amidase family enzyme [Oenococcus oeni PSU-1] Length = 488 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 133/523 (25%), Positives = 219/523 (41%), Gaps = 83/523 (15%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 S + +R S+ +LV+ + IE NSQ+NA V +A A EE+ + IN + Sbjct: 5 SRQAELVREGITSSSDLVEQSLNKIEKGNSQLNA---VTYLRADRALEEAKQ--INDHGQ 59 Query: 70 DLEGIPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 G+PI +K G A S +L Q L G +++G+ N EF Sbjct: 60 PFFGVPILLKGLGQKLAGEPATASSRLLKKLVADQTDFYVQALQKAGFIVIGQTNAPEFG 119 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + + + YGP +PW + D ++ G S G +S+ A F+ AS G+D GGSIR PA Sbjct: 120 FKNITDPTLYGPTRNPW----NLDYYSGGSSGGAASSMAADFVSIAS-GSDGGGSIRIPA 174 Query: 189 SFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 SF+ +G+KPT GR + ISFA +TR+VRD+A LL AI Sbjct: 175 SFSSLIGLKPTRGRIPVGPTDWRTWQGASISFA--------LTRSVRDNARLLDAIQTVQ 226 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW-QQGISWLKDAGAK 298 A L + +DQ + +T+ + + KT + + +L+ G + Sbjct: 227 PAAAFTTPLYEAGFFAGIDQLDRNLTIAYTTKSPVGTEVRDEAKTAVENAVDFLRSEGFQ 286 Query: 299 IVEISLP-HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILE--MYENTRSIG 354 + E P + + YY+++ E ++ A +G+ ++ +++ +Y+ + + Sbjct: 287 VEEQENPLDGKEIMQLYYLMNAGETAAMFADIEEGIGRPTNIQDMELMSWVIYQAGKLVT 346 Query: 355 FGQ--EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G+ + + I +Y ++ F + D+ LTPTT Sbjct: 347 AGEYSQALSKWDISSYQMNQ------------------------FHENYDLYLTPTTAYP 382 Query: 413 AFPLGKEENNSGSMGH----------------IYNDV--------FTVAVNMAGLPAISV 448 A L E + +G IY+ FT N+ G PAIS+ Sbjct: 383 APKLTDELISPELLGRMKEVTSLTSSFERQQLIYDAFLPSLALTPFTQQANLTGEPAISL 442 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P L +PLG+Q RE L + ++ EK + HK Sbjct: 443 PTHLTAAGLPLGIQFQAAKGREIDLLRIARLFEKHNLFHFLHK 485 >gi|116048611|ref|YP_792590.1| amidase [Pseudomonas aeruginosa UCBPP-PA14] gi|115583832|gb|ABJ09847.1| probable amidase [Pseudomonas aeruginosa UCBPP-PA14] Length = 464 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 125/505 (24%), Positives = 204/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPSEYYEHLLAHIQRWEPHLNALYRFDPQRIREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPAPCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + V D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEVLDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D++ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRSLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|42781074|ref|NP_978321.1| amidase [Bacillus cereus ATCC 10987] gi|42736995|gb|AAS40929.1| amidase family protein [Bacillus cereus ATCC 10987] Length = 533 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 126/480 (26%), Positives = 208/480 (43%), Gaps = 75/480 (15%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD----LEGIPIGIKDCFATKG 86 IQ + + +NA E+ A E +++ G R+ L GIP+ +KD T+ Sbjct: 95 IQEHDQNGITLNAVTEI-----NPNAMEEARKLDQGRGRNKKSNLYGIPVIVKDNVQTEK 149 Query: 87 IH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGP 140 + T A +++L + ++T+ +KL + GA +LGK NM E+A S + G Sbjct: 150 VMPTSAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQ 209 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 ++P+ + F GSS GS+ VA ++GT+T GSI PA+ VG++P+ Sbjct: 210 NLNPYGPI----TFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSL 265 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP---DYERAL 257 G SR GII A +LD AG + RTV+D+A L + YDE DA + DY + L Sbjct: 266 GMVSRSGIIPLAETLDTAGPMARTVKDAATLFNIMVSYDEKDAMTEKMKDKERMDYTKDL 325 Query: 258 D-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 ++G VG+ + +D + Q+ L+DAGA + + I Sbjct: 326 SIDGLKGKKVGVL--FSIDRQDDNRKEVAQKIRKDLQDAGAILTD-------------DI 370 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENT------RSIGFGQEVKHRIMIGTYVL 370 AE NL + Y + D L +N I F ++ +R + Sbjct: 371 QLNAEGVDNLQT---LEYEFKPNVNDFLSKQKNVPVKSLEEIIAFNKKDSNRRI------ 421 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE------ENNSG 424 Y + + + K +F + + TS KE E Sbjct: 422 ---KYGQTLIEGSEKSAITKDEFEKVVQ------------TSQENARKELDRYLVEKGLD 466 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 ++ I ND ++ +AG P ++VPA P+G +G+ F E+ LF++G E+++ Sbjct: 467 ALVMINNDEVLLSA-VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQS 525 >gi|67921244|ref|ZP_00514763.1| Amidase [Crocosphaera watsonii WH 8501] gi|67857361|gb|EAM52601.1| Amidase [Crocosphaera watsonii WH 8501] Length = 448 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 122/244 (50%), Gaps = 13/244 (5%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L F+ R+R + +S E+V +Y++ I N ++NA + + ++ +++D+ + Sbjct: 3 LTFLPAHILAKRIRERHVSCQEVVTAYLERISQYNPRLNAIVTLDTEQVYQQGKKADETL 62 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+ L G+PI IKD T+G+ T L + P ++TV KL GA++LGK Sbjct: 63 AKGELMGPLHGVPITIKDSLETQGLKTTCSYEPLANYIPKKDATVVAKLKAAGAIILGKT 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N + + + +G +PW ++D +TPGGS+GG +AA+A L IG+D GG Sbjct: 123 NTPKLTVDFQTNSPLFGRTNNPW-NLD----YTPGGSTGGGAAAIAARLSPLEIGSDLGG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAP-------SLDQAGIITRTVRDSAILLKAI 235 S+R PA F G +KPT R S G I P L G + + D + L I Sbjct: 178 SLRVPAHFCGICALKPTEHRVSTFGHIPELPGNPQTIKHLQNVGPLAHCIDDLLLCLSII 237 Query: 236 AGYD 239 G D Sbjct: 238 EGVD 241 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%) Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV-----FTVAVNMAGLPAI 446 D E F DV L P P AFP ++ G Y + +T+ N+ G P + Sbjct: 347 DKIEQFFDNFDVWLIPVVPIPAFPHCPSGSDIEIEGEKYPYLRAIGAYTILFNLTGHPVV 406 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +P L + +P+G+QL+G+ + TL ++ + Sbjct: 407 VLPLQLSSQGLPIGVQLVGKRGADMTLLNIAK 438 >gi|70996204|ref|XP_752857.1| N-acylethanolamine amidohydrolase [Aspergillus fumigatus Af293] gi|66850492|gb|EAL90819.1| N-acylethanolamine amidohydrolase, putative [Aspergillus fumigatus Af293] gi|159131610|gb|EDP56723.1| N-acylethanolamine amidohydrolase, putative [Aspergillus fumigatus A1163] Length = 625 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 200/456 (43%), Gaps = 49/456 (10%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP 101 A++E ++ RAAAE S +R G L+G+P+ +KD +G S++ F+ Sbjct: 150 AFVESQVERIRAAAEASTQRYKQGQPLGPLDGVPVAVKDEVHVEGYRRNLGSNL--DFKG 207 Query: 102 HYEST--VTQKLWDNGAVMLGKLNMDEFAMGSSN-----ETSYYGPVISPWRSMDSTDKF 154 +E T QK + GA+++GK M E + S +T+ P R+ + D + Sbjct: 208 GFEGTSWCVQKWEEAGAIIIGKTTMHELGLEISQAHPEADTTNNNPNYGTPRNPHNQDYY 267 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 G S G A AG L ++G D GGSIR P+SF G G+KPT+ R S S AP+ Sbjct: 268 CGGSSGGSGYAVGAG-LVPIALGADGGGSIRIPSSFCGIWGLKPTHNRVSGFPTASLAPT 326 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ---GMTVGIPKE 271 + G + ++ D A+ + +A V+ PD ++ + Q T+GI Sbjct: 327 VGVYGPMAASIDDLALAYRLMAAPAPATEDPVSATFPDPMSSISSTAQRPRSKTIGIVPS 386 Query: 272 YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDG 331 + +D P + + + + + G +V+I++P+ A+ + +E SS L Sbjct: 387 W-IDRAEPPVRAVFDAALDFYRKQGYTVVDIAIPYLPEGQRAHVLTIMSEISSGLTP--- 442 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 + G +L + +G + ++++ + A+++R L+ Sbjct: 443 AQIGALTAPNKVL------------------VSMGMWQITAQ----DLIAAQRLRNLLMS 480 Query: 392 DFTEAFEQGVD-VILTPTTPTSAFPLGKEEN----NSGSMGHIYNDVFTVAVNMAGLPAI 446 F Q +ILTPT+P + + E + S + N + N +G PAI Sbjct: 481 HLAYLFRQHPGLLILTPTSPIPGWRIESETDLARGVSDGKASVRNMEYVWLANFSGCPAI 540 Query: 447 SVPAALC----EKKMPLGLQLIGQPFREETLFSVGQ 478 S PA ++P+G+ +G+ EE L + + Sbjct: 541 SCPAGYSGGDKGGRVPVGVMAMGEWGSEEDLIAFAR 576 >gi|254474424|ref|ZP_05087810.1| indoleacetamide hydrolase [Ruegeria sp. R11] gi|214028667|gb|EEB69502.1| indoleacetamide hydrolase [Ruegeria sp. R11] Length = 479 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 132/493 (26%), Positives = 205/493 (41%), Gaps = 66/493 (13%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEG 73 R R+ D++A + V + I+ + N +NA +E ++ +A A D NG L G Sbjct: 17 RTRAGDLTAEDAVTASIKRMAEINPDLNAVVEDLSSEALERARNLDLARKNGATPGPLHG 76 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IK G T L ++ V + L D GAV++G+ N EF+ + Sbjct: 77 VPVTIKINIDQAGHATSNGVSALKDLIAPDDAPVVKNLQDAGAVVIGRTNTPEFSFRADT 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +G +PW +PGGSSGG+ AAV + A + G D GGS+R PA+ G Sbjct: 137 DNPLHGRTHNPWGR-----HISPGGSSGGAGAAVMAGIGALAHGNDIGGSLRFPAAANGA 191 Query: 194 VGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 V +KP GR + GI+ A ++ G+ITRT +D + + ++ D D Sbjct: 192 VTVKPGLGRVPAWNPSQSAERGIL--AQNMSVQGLITRTAQDLHLAMPSLIATDPRDP-- 247 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 ++P+P A+ I+ V KE L P +D + + L DAG + EI LP Sbjct: 248 FHVPMPWRGEAVAGPIR---VAFSKETYGYDLHPQVDAALEDARAALVDAGYLVEEIQLP 304 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +D R G R ++ + ++ Q V+ + Sbjct: 305 DV---------------------FDAGRTGYRALMGEVYALMKSDIDAAGSQTVRDIFSV 343 Query: 366 ---------GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-P 415 G +L +HY R + F Q ++LTP P F P Sbjct: 344 YFEEFPPFAGQELLQMMAKRTHYAREWSL-----------FMQDYPLVLTPFLPQPFFKP 392 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREET 472 E G + V++ A+N GLPA SVPA L E P+ +Q+ +RE+ Sbjct: 393 DRDTEGAEGVHEVLGCAVYSYAMNFLGLPAASVPARLAELPNGPQPINVQIAAPRWREDL 452 Query: 473 LFSVGQIIEKEAG 485 Q IE G Sbjct: 453 AVDACQAIESRIG 465 >gi|111018246|ref|YP_701218.1| amidase [Rhodococcus jostii RHA1] gi|110817776|gb|ABG93060.1| probable amidase [Rhodococcus jostii RHA1] Length = 481 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 138/495 (27%), Positives = 210/495 (42%), Gaps = 49/495 (9%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E L S ++V + + I+ S +NA+ + KA A A E+D+RI G+ Sbjct: 24 EQAQALASGAATSVAATRTALDRIDASQPTLNAFKVIRRTKALAEAAEADRRIAAGERLP 83 Query: 71 LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+PI +KD G T C F P +S + ++L GAV++GK N E Sbjct: 84 LLGVPIAVKDDVDVAGEPTAFGCPG---DFPPAARDSELVRRLRAAGAVVVGKTNSPELG 140 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +G +PW TPGGSSGG++AAV+ + AA+IG+D GSIR PA Sbjct: 141 QWPLTGGPAFGYTRNPWNG-----DHTPGGSSGGAAAAVSAGVVAAAIGSDGAGSIRIPA 195 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 ++T VGIKP GR S L G + RTV D+A+LL +G E D ++ Sbjct: 196 AWTNLVGIKPQRGRISTWPAAEAFYGLTVNGPLARTVADAALLLDVASGPHEGD---LHT 252 Query: 249 PVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P P A+ + + + + T+ +QG++ + +A K+ Sbjct: 253 PAPVTVSDAVGRDPGPLRIALSLRIPFTATPTTLHPEVRQGVARIAEALRKLGH----RV 308 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 P Y G+ +GL + ++ + + R + V R Sbjct: 309 VVDDPDY----------------GIMFGLGFLPRSMVGIDDWVRKVPDPSLVDPRTK--G 350 Query: 368 YVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 + R LR AR ++R F++ D++L PTT A P + E G Sbjct: 351 NARTGRLLRGAPLRAARAAEPRMQRRVGAIFDK-YDLVLAPTT---ATPPPRVEGIDGIS 406 Query: 427 GHIYNDVFTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + V T N+ G P+++VPA +P G QL+G E L SV + Sbjct: 407 SWATDKVITAVCPYAWPWNVLGWPSVNVPAGFTSGNLPTGAQLMGHDGAEPLLVSVAAQL 466 Query: 481 EKEAGY--FRPHKWW 493 E + RP KWW Sbjct: 467 ESVLRWDLERPEKWW 481 >gi|322372983|ref|ZP_08047519.1| amidase family protein [Streptococcus sp. C150] gi|321278025|gb|EFX55094.1| amidase family protein [Streptococcus sp. C150] Length = 483 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 134/505 (26%), Positives = 231/505 (45%), Gaps = 71/505 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+K +S ELV++ I+ E +N ++NA +V+Q+ A E+D + + + G+P Sbjct: 16 VRNKTVSPRELVETTIREAEMTNPKINA---IVSQRYEKALVEADTKSFSD--KPFAGVP 70 Query: 76 IGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD + G + A S + FRP +KL D G ++LG+ N EF + ++ Sbjct: 71 IFLKDLGQDQAGEPSTAGSRLFTDFRPKETDNYVKKLEDLGFLILGRTNTPEFGFKNISD 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G V P D + G S G ++ +G + + +D GGSIR PASF G + Sbjct: 131 AKIHGSVNLP----DDVTRNAGGSSGGAAALVNSG-ISPLAPASDGGGSIRIPASFNGLI 185 Query: 195 GIKPTYGRCSRLGIISF----APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G+KPT GR +G SF S+ A +T+TV+D+ LL + C + Sbjct: 186 GLKPTRGRIP-VGPDSFRGWQGASVQFA--LTKTVQDTKRLLYHM---QTCQMESPFILP 239 Query: 251 PDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ- 308 ++ALDQ I+ + + + +S + K ++ + L+ G ++ E++ Sbjct: 240 KLSKQALDQPIKPLKIAFSTVSPIGGKVSESAIKATKKAVRALEKLGHQVHELTEQPLNG 299 Query: 309 -YALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSI-GFGQEVKHRIMI 365 A+ +YY+++ E + A +DG+ L R D +E+ T +I GQ++ ++ Sbjct: 300 IEAMQSYYVMNSVETA---AMFDGIEAALGRQMTLDDMELM--TWAIFQSGQKIPAKVY- 353 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK---EENN 422 + VL+ SH + F + D++LTPT A G+ E+ Sbjct: 354 -SQVLAQWDQYSHQM--------------ANFHESYDILLTPTVADVAPKHGQFALSESL 398 Query: 423 SGSMGHIYN--------------------DVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 + + HI + FT N+ G P+IS+P E+ + LG+Q Sbjct: 399 NTKLKHIADYKWEKQQELIWDMFADSLDWTPFTQQANLTGQPSISLPVYRDEQGLALGVQ 458 Query: 463 LIGQPFREETLFSVGQIIEKEAGYF 487 L RE+ L + Q +E EA F Sbjct: 459 LTAAKGREDLLVQIAQEME-EASIF 482 >gi|319781481|ref|YP_004140957.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167369|gb|ADV10907.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 483 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 122/482 (25%), Positives = 208/482 (43%), Gaps = 79/482 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA----AAEESDKRIINGDAR-D 70 +R +++S E+V +++ IE N +NA +V+ + RA A+ +D + +A Sbjct: 28 IRGRELSVREVVAAFLDRIEAVNPLVNA---IVSLRDRADILREADAADASLSRTEAAGP 84 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ IKD +T G+ T S I F P + +++ + GA+++GK N+ EF +G Sbjct: 85 LFGLPMAIKDLASTTGLRTSFGSPIFADFVPQEDDFFVERIRNAGAIIIGKTNVPEFGLG 144 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S+ + +GP ++ + T GGSSGG++ A+A + + G+D GGS+R PA++ Sbjct: 145 SNTYNAVFGPTLNAFDP-----ALTAGGSSGGAAVALALDMVPVADGSDFGGSLRNPAAW 199 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVN 247 G +P+ G G F Q G+ + R V D A+LL AGY + Sbjct: 200 NNVFGFRPSQGLVP--GGPDFEVFHAQMGVDGPMGRNVGDMALLLDVQAGYHP------H 251 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI-VEISLPH 306 P+ YE+ ++G+ GIP I+WL D G + VE Sbjct: 252 APL-SYEKP-GSFLEGL--GIPAT--------------GGRIAWLGDLGGHLPVETG--- 290 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLR-----VEGKDILEMYENTRSIGFG----- 356 I+ EA+ L R+ + + + + + + R G Sbjct: 291 ---------ILGLCEAA--LGRFAEASFATEPLLPDFDFEALWQAFVTLRQASSGCALKT 339 Query: 357 ---QEVKHRIMIGTYVL----SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 K R++ + ++R A IRT R F++ D+I PT Sbjct: 340 HYDDPAKRRLLKPEAIWEVENATRLTAPQIRAASVIRTSWHRTLLSIFDR-YDLIALPTA 398 Query: 410 PTSAFPLGKE--ENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIG 465 F + +G Y+ V+ + G PA +VP ++ P+G+QLIG Sbjct: 399 QVFPFDIDTHWPREVAGRTMDSYHRWMQVSAFATLGGCPAANVPVGFDDRGRPMGMQLIG 458 Query: 466 QP 467 +P Sbjct: 459 RP 460 >gi|307945165|ref|ZP_07660501.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp. TrichSKD4] gi|307771038|gb|EFO30263.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp. TrichSKD4] Length = 283 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 132/269 (49%), Gaps = 23/269 (8%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F V + L I+ ELV + I+ N A+I + A AAA+E++ R+ Sbjct: 7 FKDVRTLKSDLSGGAITPGELVSYFASRIQKLNDLSRAFITITAD---AAADEAN-RLSP 62 Query: 66 GD--ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 D A GIP KD F +G+ T A S + ++ +L GAV LGK N Sbjct: 63 EDLTASPFSGIPYACKDLFDVEGVPTTAGSKVFHDRIGDRDAFAIAQLRAAGAVCLGKTN 122 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + EFA G++ E YG ++ + D+T GSS GS+AAVA L A++ TDTGGS Sbjct: 123 LHEFAYGATGENEVYGTCVNAY---DTTRLAG--GSSSGSAAAVAFGLAPAALRTDTGGS 177 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +R PA VG+KPT S G++ + +LD G+ITRT+ D A L + Sbjct: 178 VRAPAVLNVLVGLKPTLDLVSTRGVVPYCWTLDHVGLITRTIADCADFLDVLT------- 230 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEY 272 + AL+Q I+G+ +GIP + Sbjct: 231 -----TTRSHAEALNQPIKGLRIGIPTHF 254 >gi|158424257|ref|YP_001525549.1| amidase [Azorhizobium caulinodans ORS 571] gi|158331146|dbj|BAF88631.1| amidase [Azorhizobium caulinodans ORS 571] Length = 442 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 126/479 (26%), Positives = 209/479 (43%), Gaps = 64/479 (13%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F+ +++ R+++ +++ L+ S ++ I + + A++ V A A E DKR Sbjct: 8 FLTAAQAAARIKAGTLTSEALIRSCLERIGARDPAVKAWLHVDPDLAIRQARELDKRPPA 67 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G L GIP G+KD T + T S RP ++ + GAV+LGK + Sbjct: 68 GP---LHGIPFGVKDIMDTADMPTTYNSQEWQDHRPTRDAACVNIVRQAGAVILGKTDTV 124 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA S S +P+ TPGGSS GS AAV + + GT T GS Sbjct: 125 EFAFNSRKAASR-----NPYNL-----AHTPGGSSSGSGAAVGDYQVQCAFGTQTAGSHI 174 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +PASF G IKP++G SR G+ + LD G R+V D ++L A A Sbjct: 175 RPASFNGIYAIKPSWGTVSREGVHMISAILDTVGWYGRSVDD--LILGAQA--------- 223 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 +P E + ++G+ +G + K + L+ AG + EI+LP Sbjct: 224 --FRLPGMESLAARGVKGLKIGYCETPYWSRAETGARKAMAVAVERLQRAGVIVEEIALP 281 Query: 306 -HTQYALPAYYIISPAEASSNLARYDG-VRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 H A+ +I + +A YD +R G R+ + L + EN G+ V Sbjct: 282 AHFADIAEAHTMIMFGD--GRVALYDEYLRQGGRLHPELKLTV-EN------GRGVTPET 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 ++ Y L+ C + +F +A G D +L P G+ Sbjct: 333 LVAAYDLADTC---------------RMEF-DAIAAGYDAVLAPAA------TGEAPKGL 370 Query: 424 GSMGH-IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++G I+N ++T + P +++P+ L + +P+G+QL+G + L +V Q ++ Sbjct: 371 HTVGDWIFNGLWT----LLHTPCVAIPSVLGDIGLPVGVQLVGGRLSDARLLAVAQSLQ 425 >gi|33596727|ref|NP_884370.1| putative amidase [Bordetella parapertussis 12822] gi|33573428|emb|CAE37412.1| Putative amidase [Bordetella parapertussis] Length = 460 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 213/480 (44%), Gaps = 81/480 (16%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S + + V + + + +S+ + + ++ I + N + A++ V A KA A D+ Sbjct: 30 SRIAALTVEQGLREMEAGKLSSEQWTQACLERIASRNPVVKAWVYVNADKALERARLVDR 89 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G + L+G+P+G+KD T + T+ I G RP ++ VT+ + + G V+LG Sbjct: 90 ---EGRRQRLDGVPLGLKDIIDTADMPTELGDPEIFPGRRPAEDAAVTRLMRELGVVLLG 146 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + S + GP +P TPG SS GS+AAVA F S+GT T Sbjct: 147 KNTV------SRHSIMLPGPARNP-----HDPSRTPGASSAGSAAAVADFQTPISLGTQT 195 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGSI +P++F G VG KPT G+ ++ LD G I R+V D +IL G Sbjct: 196 GGSIVRPSTFCGAVGFKPTIDTLPYAGLRRYSRPLDTLGAIARSVADLSILFGEALGD-- 253 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 P D E A+ + TVG+ + D P + + + ++ L+ AG ++ Sbjct: 254 --------PRFDSELAVRRD---FTVGVWRPLGWDDAEPCVREAFDDAVARLQQAGVRVK 302 Query: 301 EISLPH--TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + +P TQ A + DI+ Y+ RS +E Sbjct: 303 VLDMPKIFTQIA----------------------------DDHDIIMAYDLARSF---KE 331 Query: 359 VK--HRIMIGTYVLS-----SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ H +L R Y R + +R F + + VDV+ TP T Sbjct: 332 IRRDHHDKCDPALLEYLDKGDRDTAQDYARTLDLADACRRAFLDV-ARDVDVLPTPAT-- 388 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 LG+ + S + +I+ ++T+ N P++++P A + +P+GLQL+G F++E Sbjct: 389 ----LGEAPDVSDTGSNIFIRIWTLLHN----PSLTLPIARGPRGLPVGLQLVG--FQKE 438 >gi|300692394|ref|YP_003753389.1| glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia solanacearum PSI07] gi|299079454|emb|CBJ52129.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia solanacearum PSI07] Length = 448 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 113/237 (47%), Gaps = 22/237 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES--TVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ IKD F G T A S L +P S T +L GAV+LG+ NM EFA Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRAL-AHQPAATSDATAVARLRAAGAVLLGRTNMSEFA 131 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 +YG +P D T GGS+ G + VAG + A++GTDTGGSIR P+ Sbjct: 132 FSGLGLNPHYG---TPRTPADGTR--AAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPS 186 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +F G KPT R G + + SLD G + +V D ++ A+ D V L Sbjct: 187 AFCALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSV-DCCAIVDAVLSGQTLDTDAVPL 245 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 G+ +G+ ++Y L T+ +++ ++ L+ AGA+IV P Sbjct: 246 -------------AGLRLGLTRDYVGADLDDTVTTAFERAVARLEHAGARIVRFDFP 289 >gi|332526876|ref|ZP_08402969.1| putative amidase [Rubrivivax benzoatilyticus JA2] gi|332111318|gb|EGJ11302.1| putative amidase [Rubrivivax benzoatilyticus JA2] Length = 502 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 134/510 (26%), Positives = 206/510 (40%), Gaps = 72/510 (14%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D +R ++S EL+D E ++NA + A A ++ +G A L G Sbjct: 16 DLVRRGEVSPHELLDLARAQAERVQPRLNAVTRWLPALAEA-------QLAHGAAGPLGG 68 Query: 74 IPIGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +KD A G+ T S + P + V ++L D GA + K N+ EF + Sbjct: 69 VPFVVKDSVADVAGVPTSYGSRAGERLVPPVHAAVLRRLLDAGATVFAKTNLPEFGLKGV 128 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +++ +GPV +PW D ++ A A G D GGS+R PA+F G Sbjct: 129 SDSRAFGPVRNPW---DPARHAGGSSGGSAAAVAAGVVPMAG--GNDGGGSLRIPAAFCG 183 Query: 193 TVGIKPTYGRCSR---LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 +KP+ GR S LG + F + G+I+R+VRDSA+ L + G + D P Sbjct: 184 LFALKPSRGRISNGPGLGEVWFGACSE--GVISRSVRDSALALDILCGPEPGDPFTGAAP 241 Query: 250 VPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + AL + + V L + Q L+ G + E + P Sbjct: 242 AEPFVAALRRPPARLRVAFSTASPLGTAVDAEAAAAVQAAARRLEALGHHVEEAAPPVDG 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-GFGQEVKHRIMIGT 367 +A+ A Y+ A+ V R G E TR + +GQ +G Sbjct: 302 HAVAACYL------QLYAAQVPAVMAQARALGARDTEFEPLTRVMAAYGQR------LGG 349 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN----- 422 L++ + RTL AF DV LTPTT A PLG E + Sbjct: 350 AALTAGLARWNGF----ARTL------GAFFTAHDVWLTPTTARPALPLGALEPSPAEAR 399 Query: 423 -------SGSM------GHIYNDV------------FTVAVNMAGLPAISVPAALCEKKM 457 SG + G + V FT N+AG+PA+S+P + + Sbjct: 400 LTDLLLASGLLAPLARWGALDTRVQRLFVQNLAPYPFTQLANLAGVPAMSLPLHRTPEGL 459 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 PLG+Q +G+ E TL + +E +A +F Sbjct: 460 PLGVQAVGRQGDEVTLLQLAAELEADAPWF 489 >gi|330914416|ref|XP_003296630.1| hypothetical protein PTT_06775 [Pyrenophora teres f. teres 0-1] gi|311331130|gb|EFQ95265.1| hypothetical protein PTT_06775 [Pyrenophora teres f. teres 0-1] Length = 598 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 53/472 (11%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESDK 61 F ++ + D S ++ ++V+ + I Q A+++ RAAA S + Sbjct: 115 FYSIKDFHDAYLSGALTPTDVVEHLLPLIRRDVPQRTPYSTAFMDTKVDLVRAAAAASTQ 174 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G L+G+P G+KD G H + S + L GA+++ Sbjct: 175 RYKLGQPLGVLDGVPFGVKDDVQVNGYRRYIGARHDVSNGGEGETSFCARALEKEGAILV 234 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G L M E M ++N +G ++P+ + T GGSSGG ++AV+ L +IG+D Sbjct: 235 GTLTMHELGMDTTNNNPIWGTPVNPYNTCYYT-----GGSSGGPASAVSHGLIPFAIGSD 289 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+KP++ R S + S+ G I + D AI + +A D Sbjct: 290 GGGSIRLPSNYCGIYGLKPSHSRVSMAPMADSTSSVTTHGPIAANMSDLAISYRVLAQPD 349 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAK 298 + P+ S + VGI K + LD + + + + K G + Sbjct: 350 PSTFPSSHFRAPNPH----TSHRPKVVGIYKPW-LDRADGPVQEAIYAALGYFEKQLGYE 404 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 ++++++P T A+ + AE ++ Y Y L + +L + T + Sbjct: 405 VIDVTIPLTTDGQLAHAMTIMAEGAT---AYKHSVYDLSAPNRILLSVGRQTPA------ 455 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPTSAFPLG 417 S ++ A+++R L + F++ +I++PT+P + +P+ Sbjct: 456 ------------------SDFILAQRVRNLQMQHLAHLFQKHPGLIIVSPTSPNAGWPID 497 Query: 418 KEENNSG---SMGHIYNDVFTVAVNMAGLPAISVPAALC-----EKKMPLGL 461 ++ + G + + N + N G+P I P E ++P+GL Sbjct: 498 PKDLSHGVSDANMQLRNMEYVWFANFTGVPCIQFPVGYVQGVRGEGRVPMGL 549 >gi|258573559|ref|XP_002540961.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901227|gb|EEP75628.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 621 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 131/530 (24%), Positives = 224/530 (42%), Gaps = 89/530 (16%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAI--------ENSNSQMNAYIEVVAQKARAAA 56 N+ +V++ + S +++ + + + I I E+S + + I++V AAA Sbjct: 113 NYYSVTDYHNMYMSGELTPIAVAKAIIPLIRRDITPPGEHSLAWFDTKIDLVL----AAA 168 Query: 57 EESDKRIINGDARDL-EGIPIGIKDCFATKGIHT--QACSHILDGFRPHYEST--VTQKL 111 E S +R N L +G+P +KD + G T + + P T ++L Sbjct: 169 EASTQRYKNKCPIGLLDGVPTAVKDEYDIDGYRTCLGSANDYTSAALPEKSITSWCVRQL 228 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 D GAV+LGKL M EF + +S +G +P+ S ++ GGSS GS+ AV+ L Sbjct: 229 EDAGAVILGKLAMHEFGLDTSGNNPIHGTPRNPFNS-----QYYTGGSSSGSAYAVSAGL 283 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 S+G+D GGSIR P+SF G+KPT+ R S + + + G I +R A+L Sbjct: 284 IPISLGSDGGGSIRIPSSFCSVYGLKPTHSRLSHRPGCNHSNTCAVNGPIAADIRSLALL 343 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 I + P A + +GIP+ + +P I + + Sbjct: 344 YHVIG----TPHPSSHFPTLSPPLAPPIRPRNKVLGIPEAW-FSQSTPAIQQLCHSLLDK 398 Query: 292 LKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L A ++ I +P+ + A+ + +A++ L +G+ Sbjct: 399 LVSACDYTLIPIEIPYLKEGQAAHAMTVLTDAATLLPDTEGL------------------ 440 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPT 408 ++IMIG L + + +L A+K+R L+ + +++ G+ +I+TPT Sbjct: 441 -------TAANKIMIG---LGTITPATDFLLAQKLRQLLMQHLAYLWKEYPGM-IIVTPT 489 Query: 409 TPTSAFPLGKEENNSGSMGHIYND--------VFTVAVNMAGLPAISVPAALCEK----- 455 T + +P+ E + H ND + N G+PA++VPA Sbjct: 490 TSCAGWPIRSES----ELKHGINDGNQTLKTMEYVWMANFTGIPALNVPAGFVIPEGTPG 545 Query: 456 -----------KMPLGLQLIGQPFREETLFSVGQIIEK--EAGYFRPHKW 492 K+P+GL +G+ E+ L G IEK E RP W Sbjct: 546 AGEVAETDTVGKVPVGLMGMGEWASEDNLLQWGLDIEKVGEERLSRPPIW 595 >gi|70731042|ref|YP_260783.1| amidase [Pseudomonas fluorescens Pf-5] gi|68345341|gb|AAY92947.1| amidase family protein [Pseudomonas fluorescens Pf-5] Length = 464 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 130/526 (24%), Positives = 219/526 (41%), Gaps = 102/526 (19%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI----EVVAQKARAAA 56 M++L+ ++ ++ + S+ +S ++ + + I + A E V +ARAA Sbjct: 1 MTDLHNLSTTQLLAQFASRTLSPLDYYEHLLAHIGRWEPHIRALYAFDPEQVRLQARAAT 60 Query: 57 EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 E K NG L+GIP+ IK+ AT+G S ++ ++ + GA Sbjct: 61 ERWSKGAPNGP---LDGIPVTIKELIATQGTPIPLGSAATTLKPALQDAPPAARMREAGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++L K + +F M SS +S++G +PW + +T SS G++AA A I Sbjct: 118 IILAKTTVPDFGMLSSGLSSFHGITRNPWNTACNTGG-----SSSGAAAAAAAGYGPLHI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKA 234 GTD GGS+R PA++ G VG KPT GR I P AG +TR+V D+ +L++ Sbjct: 173 GTDIGGSVRLPAAWCGLVGFKPTLGR------IPIDPYYTGRCAGPMTRSVEDTVLLMRH 226 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGI---------PKEY------------- 272 +A D DAT + P+ D S+ G+ +G+ P+ + Sbjct: 227 LARPDARDATSLP-PLTDDWSDEPVSVNGLKIGLMLEPGAGLQPEGFVCAAVEQAARLFE 285 Query: 273 ----RLDYLSPTIDKTWQQGIS--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 ++ L+P +D+ G+ W A++ + LP YI A ++L Sbjct: 286 SHGAQVRTLAPIMDRAQLDGLDRFWRARQWAELSALGAEQFAKVLP--YIRDWAAPGADL 343 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR 386 + + V +GF Q + R RA ++ Sbjct: 344 SGVEAV--------------------LGFNQTFEMR-----------------RRAAQV- 365 Query: 387 TLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 F+E D++L+PT + FP ++ + VFT+ NM PA+ Sbjct: 366 ------FSE-----FDLVLSPTNQINHFPAQWPSPSNDPQQPFEHIVFTLPWNMGEQPAL 414 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 S+ +P+GLQ+I F ++ L V + E G H W Sbjct: 415 SINCGFAADGLPIGLQMIAPRFADQWLLQVAKTYESWRGAI--HSW 458 >gi|2462927|emb|CAA71371.1| putative amidase [Arabidopsis thaliana] Length = 457 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 135/266 (50%), Gaps = 12/266 (4%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+V E + ++++ I++ ELV Y++ ++ N + A + + A A+E+D + G Sbjct: 1 MSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDLLSQG 60 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L GIP G+KD A G T S E+ V ++L +GAV++ KL Sbjct: 61 TYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAKLVTG 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T GS+ Sbjct: 121 SMAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETAGSMT 172 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D D + Sbjct: 173 YPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPDDLSS 232 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKE 271 + +E I +TVG K+ Sbjct: 233 REIA---FEDPFSVDITKLTVGYTKD 255 >gi|313200739|ref|YP_004039397.1| glutamyl-tRNA(gln) amidotransferase subunit A [Methylovorus sp. MP688] gi|312440055|gb|ADQ84161.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methylovorus sp. MP688] Length = 462 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 117/425 (27%), Positives = 185/425 (43%), Gaps = 56/425 (13%) Query: 71 LEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P IKD G+ T AC + P +TV Q+L D GA+ LGK N+D+FA Sbjct: 68 LYGLPFAIKDNIDLAGVPTTAACPEY--AYTPAQHATVVQRLIDAGAIPLGKTNLDQFAT 125 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG S+D D + G SSG + + G L + S+GTDT GS R PAS Sbjct: 126 GLVGVRSPYGAC---HNSIDP-DYISGGSSSGSAVSVALG-LASFSLGTDTAGSGRVPAS 180 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-----AT 244 F VG KP+ G S G++ +LD I T +D+A +L+ G+DE D A Sbjct: 181 FNNLVGHKPSCGLLSTRGVVPACRTLDCVSIFALTAQDAATVLEVAQGFDEEDPYSREAL 240 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVEIS 303 P+P++ G G+P+ +L + + + ++ L G VEI Sbjct: 241 TAGKPLPEH---------GFRFGVPRADQLQFFGNAETPALFDAAVAKLVALGGVAVEID 291 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 A Y E RY +R + + + + V H+I Sbjct: 292 FTVFLQAARLLY-----EGPWVAERYAAIREFIEAKPEALY-------------PVTHKI 333 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE--- 420 + G S+ Y +++ L ++ A +D+I+TPT T + + + E Sbjct: 334 ISGATRFSAA---DAYSFGYQLKALQRK--ATAVWDDLDIIVTPTAGT-IYTIAEVEADP 387 Query: 421 -NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + ++G+ +T +N+ L AI+VP ++P G+ L F + TL ++ Sbjct: 388 VQTNSNLGY-----YTNFMNLLDLSAIAVPTGFQANRLPFGVTLCAPAFHDATLLALAAR 442 Query: 480 IEKEA 484 +E A Sbjct: 443 MEDAA 447 >gi|56698241|ref|YP_168614.1| amidase family protein [Ruegeria pomeroyi DSS-3] gi|56679978|gb|AAV96644.1| amidase family protein [Ruegeria pomeroyi DSS-3] Length = 442 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 135/486 (27%), Positives = 207/486 (42%), Gaps = 53/486 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+ M S+ + + I V L D Y+ AIE Y V A++ARA A + Sbjct: 1 MSDWLTMTASDLGRGIAAGRIDPVALTDCYLDAIEAHPDSERIYARVTARRARAEAHAAA 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G R L +G+PI KD F + G+ T++ S +L G P ++ V + GAV L Sbjct: 61 ERARLGLRRSLFDGVPISWKDLFDSAGVATESGSALLAGRVPEADALVLRNATAAGAVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M E A +P + PGGSS G++A+V+ L A IG+D Sbjct: 121 GKTHMSELAFSGLGLNPITATPPNP-----HDPAWVPGGSSSGAAASVSFGLAACGIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R P+++ VG+K T GR S G++ D G + R+V D+A L + G Sbjct: 176 TGGSVRIPSAWHDLVGLKTTSGRLSLEGVVPLCLKFDTVGPLARSVEDAAEALALLEGGR 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D S++G + + + LD L + +S L AGA+I Sbjct: 236 AADLR-------------GASLKGCRLAVLQTVALDDLREEPGSAFDDALSRLSAAGAEI 282 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V + +P A+ ++ AEA YGL +D++E + ++ Sbjct: 283 VPLEVPELVDAMALSGVLYTAEA-----------YGLW---RDVIEANPDA----MYDQI 324 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 R G S Y + + R R + G D +L PT P P ++ Sbjct: 325 LERFRAGAG-FSGPDYVAAWARLETCRA-----AWDGAVAGFDAVLMPTAPI--LPPDRD 376 Query: 420 ENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 S ++ ++ T N+ GL +S+P GL L+G+P EE L Sbjct: 377 RLLSDHDYYVSENLLALRNTRIGNLMGLSGLSLPTG----TPACGLTLLGRPDGEEALLR 432 Query: 476 VGQIIE 481 VG E Sbjct: 433 VGAAAE 438 >gi|295697299|ref|YP_003590537.1| Amidase [Bacillus tusciae DSM 2912] gi|295412901|gb|ADG07393.1| Amidase [Bacillus tusciae DSM 2912] Length = 448 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 114/419 (27%), Positives = 186/419 (44%), Gaps = 39/419 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+G+KD G+ T S P ++ KL GAV++GK N E A Sbjct: 62 LSGIPVGVKDMIDVAGMPTTGGSRAYHRM-PAEDAPCVAKLRKAGAVIVGKTNTQELA-- 118 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 YG + P R+ + D + PGGSSGGS+AAVA + AA++GTDTGGS+R PAS Sbjct: 119 -------YGVITPPTRNPRNLD-YIPGGSSGGSAAAVAAGMVAAALGTDTGGSVRIPASC 170 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KPT R S G++ + + D G++T T D+ L + + Sbjct: 171 CGIVGFKPTRDRISTQGVMPLSTTYDHVGLLTHTASDARYLFHLLTEHPGDSPIRAADGR 230 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQY 309 + R ++ + +P +Y + P I + ++ + + G + + P ++ Sbjct: 231 TERPRPGGRASHDRVLAVPWDYIRERTDPEIVQIFEDVLGVFRRLGYGFEAVEMEPFDEW 290 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + P ++ +G R GL +D+ E + R I Sbjct: 291 KALQLTVRLPEAYLTHREVLEGPRRGLL--QRDLAERLDPGRDISA-------------- 334 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-SGSMGH 428 YL A+ IR D+T E +++ PT P +G+E+ GS Sbjct: 335 -------LDYLAAQAIRREKIADWTRKMESYAGLVM-PTLPCPVPKVGQEQVRIPGSEVP 386 Query: 429 IYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +++ + T N+ G PA+SVP + + +P+GLQ++G P ++ L + + AG Sbjct: 387 VWDALVSMTAPWNVVGFPAVSVPCGVDSRGLPVGLQVVGSPMDDDGLLDLAAQFQAAAG 445 >gi|170693685|ref|ZP_02884843.1| Amidase [Burkholderia graminis C4D1M] gi|170141467|gb|EDT09637.1| Amidase [Burkholderia graminis C4D1M] Length = 459 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 16/280 (5%) Query: 26 LVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFA 83 LV++ ++ I + Q A++ V A AR AA+ D+ G L GIP+ +KD F Sbjct: 28 LVETALERIADPAGQGAVAFMHVDAGGARQAADAHDRLRAAGTVLSPLAGIPVSVKDLFD 87 Query: 84 TKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G T+A S +L D ++ +L GAV++G+ NM EFA +YG + Sbjct: 88 IEGQPTRAGSTVLADAPAAKQDAVAVARLKRAGAVIVGRTNMSEFAFSGLGLNPHYGNPL 147 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 SP+R D+ GGSS G++A+VA + A ++GTDTGGSIR P++ G G KPT R Sbjct: 148 SPYRRDVKGDERISGGSSSGAAASVADGMAAVALGTDTGGSIRIPSALCGLTGFKPTSTR 207 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 + G + + +LD G I +V A++ + +AG + P A + ++ Sbjct: 208 IPKQGGVPLSSTLDSFGPIGVSVACCALVDRMLAGLE-----------PRVPAA--RPLE 254 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 G+ +G+ Y D + P + + L+ AGA + E+ Sbjct: 255 GVRLGVLTNYVTDGVEPAVAAAIDTALKHLEAAGAIVSEV 294 >gi|297744648|emb|CBI37910.3| unnamed protein product [Vitis vinifera] Length = 520 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 137/515 (26%), Positives = 215/515 (41%), Gaps = 87/515 (16%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NGDARD 70 S+++L S+ +LVD Y+ IE N ++ IEV AR ++++ I N + + Sbjct: 42 SQNKLVSR-----QLVDFYLHQIEALNPELCNVIEV-NPDAREQTDKANAEIKSNKELGE 95 Query: 71 LEGI-PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+ + +KD TK ++T S+ L G + ++ V ++L GAV+LGK +M E+ Sbjct: 96 LHGVLTVLLKDSINTKDKLNTTVGSYALLGAKVGGDAAVVERLRKAGAVILGKASMSEWY 155 Query: 129 MGSSNETSYYGPVISPW--RSMDSTDKFTPGG----SSGGSSAAVAGFLCAASIGTDTGG 182 S +T + W RS + + P G S+ GS+ +VA + A S+GT+T G Sbjct: 156 QFRSLKTR------NGWCPRSGQGVNPYVPSGDPCESNSGSAISVAANMVAVSLGTETDG 209 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI PA VG KPT G SR+G+I +P D G I +V D+ +L AI G+D D Sbjct: 210 SIICPADVNSVVGFKPTIGLTSRVGVIPISPRQDSVGPICWSVLDAVYVLDAIVGFDPRD 269 Query: 243 ATCVN-----LPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDA 295 +PV Y++ L++ I G +G+ + + Y T ++ ++ L+ Sbjct: 270 GEATKEASKFIPVGGYKQFLNKDGIAGKRLGVVRNPFSGFYNRSTAISAFEAHLTVLRQR 329 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEMYENTRSIG 354 GA +V+ L +E D IL YE+ S Sbjct: 330 GAILVD---------------------------------NLEIENVDIILNPYESGESTA 356 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 E K + I Y+ L L D + E G +V + Sbjct: 357 LLAEFK--LNINEYLKELTHSPVRSLAGIIAFNLNNSDLEKTDEYGQEVFIAAEMTNG-- 412 Query: 415 PLGKEENNSGS-MGHIYNDVF-----------TVAVN--------MAGLPAISVPAALCE 454 +GK+E + M ++ D F TVA+ + G P +SVPA Sbjct: 413 -IGKQERMAMEMMANLSQDGFEKLMMENKLDATVALGSGMATVLAIGGYPGVSVPAGYDG 471 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 MP G+ G E L V E+ RP Sbjct: 472 DGMPFGICFGGLKGMEPKLIEVAYGFEQATKIRRP 506 >gi|228958235|ref|ZP_04119964.1| Amidase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801444|gb|EEM48332.1| Amidase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 418 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 115/432 (26%), Positives = 195/432 (45%), Gaps = 56/432 (12%) Query: 70 DLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM E+A Sbjct: 18 NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEWA 77 Query: 129 -----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 S + G ++P+ + F GSS GS+ VA +IGT+T GS Sbjct: 78 NYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTETTGS 133 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 I PA+ VG++P+ G SR GII A +LD AG + RTV+D A L A+ GYDE D Sbjct: 134 IVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDVATLFNAMIGYDEKDV 193 Query: 244 TCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + DY + L ++G +G+ + +D ++ L+DAGA + Sbjct: 194 MTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKVVVEKIRKDLQDAGAIL 251 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT------RSI 353 + I AE NL + Y + D L +N I Sbjct: 252 TD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSLEEII 295 Query: 354 GFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 296 AFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV------ 346 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F E+ Sbjct: 347 -------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQFGEKE 398 Query: 473 LFSVGQIIEKEA 484 LF++G E+++ Sbjct: 399 LFNIGYAYEQQS 410 >gi|148254382|ref|YP_001238967.1| amidase [Bradyrhizobium sp. BTAi1] gi|146406555|gb|ABQ35061.1| Putative Glu-tRNA amidotransferase [Bradyrhizobium sp. BTAi1] Length = 450 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 19/236 (8%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 GIP+ IKD F KG T+A S L+ P ++ V +L G V++G+ NM EFA Sbjct: 74 GIPVSIKDLFDIKGQVTRAGSRALEDSAPADADAPVVARLRRAGFVVIGRTNMTEFAYSG 133 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 +YG S W+ PGGSS G++ +V + ++GTDTGGS R PA+F Sbjct: 134 IGINPHYGTPKSAWKR---EIGHVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRIPAAFN 190 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G KPT R G + + +LD G + TV A+L D+ + P+ Sbjct: 191 GITGFKPTQARVPLDGGVPLSTTLDSFGPLANTVACCAVL----------DSVLADEPI- 239 Query: 252 DYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 R L + ++G+ + +P LD L + +T+++ + L GA I I P Sbjct: 240 ---RPLAPRPVKGLRLAVPTTVVLDELDVEVAETFERALETLAKQGALIERIEFPE 292 >gi|296390940|ref|ZP_06880415.1| amidase [Pseudomonas aeruginosa PAb1] Length = 464 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 125/505 (24%), Positives = 203/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPGEYYEHLLAHIQRWEPHLNALYRFDPQRVREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPAPCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + V D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEVLDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D+ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRRLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|78355565|ref|YP_387014.1| 6-aminohexanoate-cyclic-dimer hydrolase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217970|gb|ABB37319.1| 6-aminohexanoate-cyclic-dimer hydrolase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 498 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 140/503 (27%), Positives = 224/503 (44%), Gaps = 54/503 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL + R +RS I+ E++ + QA+E N +NA ++ + +A A + Sbjct: 15 MQELGTLDAVALRGLIRSGQITPDEVLHTVFQAMEALNPAINAVVQPMKTQAYA-----E 69 Query: 61 KRIINGDARDLEGIPIGIKDCFAT-KGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVM 118 R I+ +A L G+P +KD + G+ T+ AC + DGF P +S +T + G V Sbjct: 70 LRHIDPEA-ALYGVPYLLKDLGPSYAGVPTRMACMALKDGFFPGEDSHLTHRFRTLGMVP 128 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 GK EF + ++ ++ +G +PW D T GSSGGS++AVA + + G Sbjct: 129 AGKSATPEFGLTATTDSVLHGQTRNPW---DVTRSPG--GSSGGSASAVAAGIVPVAHGN 183 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-------GIITRTVRDSAIL 231 D GGSIR PA+ G VG K CSR G++S+AP L + G++TRTVRDSA Sbjct: 184 DGGGSIRIPAAACGLVGFK-----CSR-GLLSWAPELGECWGALATNGVLTRTVRDSAAA 237 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L + G D P + + ++ + +G Y L + P + Sbjct: 238 LDGLCGTGLGDPYPFPRPPLPFSTEIRRATGRLKIG----YALQW--PAGAAPASEDCRN 291 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 A+++E H + A P + A+ + V + I+ + Sbjct: 292 AVMHTARLLEGMGHHVEEAAPDLHCDEVADIFMTI-----------VAAQVIVTLGPLIS 340 Query: 352 SIGFGQEVKH--RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 G E +H ++ + R +HY A L+ R FE+ DV+LTP Sbjct: 341 PAGMPDE-RHAEKLTRLLWEKGQRETGAHYAGALNRMHLLGRAMARFFER-YDVLLTPVM 398 Query: 410 PTSAFPLGK------EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 T LG E ++ +M + +T NMAG PA+S+P E +P+G+QL Sbjct: 399 TTPPAKLGAYSLQQMELDDYAAMLGTFIP-YTPPFNMAGSPAVSLPLYATEHGLPVGVQL 457 Query: 464 IGQPFREETLFSVGQIIEKEAGY 486 R+ LF + +E+ A + Sbjct: 458 GAGTGRDGLLFRLAARLEEAAPW 480 >gi|229150182|ref|ZP_04278404.1| Amidase [Bacillus cereus m1550] gi|228633301|gb|EEK89908.1| Amidase [Bacillus cereus m1550] Length = 536 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 126/496 (25%), Positives = 219/496 (44%), Gaps = 60/496 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 IDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNVMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV-- 464 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F Sbjct: 465 -----------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQF 512 Query: 469 REETLFSVGQIIEKEA 484 E+ LF++G E+++ Sbjct: 513 GEKELFNIGYAYEQQS 528 >gi|196228326|ref|ZP_03127193.1| Amidase [Chthoniobacter flavus Ellin428] gi|196227729|gb|EDY22232.1| Amidase [Chthoniobacter flavus Ellin428] Length = 431 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 125/416 (30%), Positives = 177/416 (42%), Gaps = 48/416 (11%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 G+ + +KD +G+ T A S L P ++ G ++GK N+ EFA+ Sbjct: 52 GLKLAVKDNIDMRGVVTTAGSEYLAKNNPPAKADAQCLAIARARGVPIVGKTNLSEFAVA 111 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YYG SP M + PGGSS GS+ AVA S GTDT GS+R PA+ Sbjct: 112 PSGFNEYYGTPKSPLSHMH---RLIPGGSSCGSAVAVARGYADVSFGTDTAGSVRVPAAC 168 Query: 191 TGTVGIKPTYGRCSRLGIISFAPS-LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG+K T+G S G++ P LD G I + V D+A G D +A Sbjct: 169 CGVVGLKTTFGLVSLHGVVPVEPKHLDTVGPIGKNVEDTA------KGMDLLEAGFAG-- 220 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y A G + + + Y L S +DK L+ AG K+V + + Sbjct: 221 --KYAAAKAAKPAGRDIRVGRLY-LKGTSSGVDKAVDAA---LQKAGFKVVPLDERFRE- 273 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + A+ DG + G + E TR+ G K I++G Sbjct: 274 -------------KWDQAKKDG--NTMAAAGVWLSEGPYLTRN-GVSARTKATILVGRV- 316 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 Y Y RA R + AF + VD I PT ++ P G N + I Sbjct: 317 ----QYPLAYRRALARREEWQEALRHAFHK-VDFIALPTLQST--PPGIPPNLKIGLLEI 369 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKKMPL-GLQLIGQPFREETLFSVGQIIEK 482 + F TVAVN AG PA++VP L + L LQLI P +E L + G+++E+ Sbjct: 370 FMLDFQNTVAVNFAGNPALAVPVPLAHTNVRLTSLQLIAPPKKEAELLNAGRLVEQ 425 >gi|111019972|ref|YP_702944.1| indoleacetamide hydrolase [Rhodococcus jostii RHA1] gi|110819502|gb|ABG94786.1| probable indoleacetamide hydrolase [Rhodococcus jostii RHA1] Length = 446 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 206/452 (45%), Gaps = 53/452 (11%) Query: 39 SQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG 98 S NAYI VV + +D + +G +L G+P +KD G+ T S + Sbjct: 32 SSHNAYISVV--------DHTDPAVADG---ELAGVPFAVKDNIDVAGMPTTGGSPLFAL 80 Query: 99 FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 P ++ V L + GAV++GK N+ E A G ++ + YGPV +P + G Sbjct: 81 DVPECDAGVVSALREAGAVVVGKTNLHELAFGITSNNATYGPVRNPLDIARVAGGSSGGS 140 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 ++ + V S+GTDTGGS+ P++F G VG +PT GR G+++ + S D Sbjct: 141 AAAVALGTV-----PFSLGTDTGGSVTIPSAFCGIVGFRPTTGRYPSDGVVNLSSSRDTI 195 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYL 277 GI RTV D ++ + I T + PD + +G +P Y D + Sbjct: 196 GIHARTVEDVRLVDRVIT------RTSPAIDTPDR--------TDLVLGTVPSRY--DDM 239 Query: 278 SPTIDKTWQQGISWLKDAGAKIVEISLPH--TQYALPAYYIISPAEASSNLARYDGVRYG 335 P + + + L+ +G KIVE+ +P + A P ++ EA LA V G Sbjct: 240 EPAVAEATHLALDDLRASGVKIVELCMPDDLSLAAEPGIELVF-YEAERLLAAR--VNNG 296 Query: 336 LRVEGK-DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 G D+ ++ + +IG +V+ I + ++R S Y +AR+ R ++R + Sbjct: 297 RGQTGPVDVADLID---AIG-SPDVR---AIFESIAATRVTASAYEQARRRRWQLRRLYE 349 Query: 395 EAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-----MAGLPAISV 448 E F GV ++ PT PL +++ G TV N +AG+P ++V Sbjct: 350 ETFAATGVHALIAPTVHVRP-PLIGQDDTIDVNGRPQPVFPTVTRNSAPGSVAGVPMLTV 408 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 P + + +GL L G+ F + L +VG +I Sbjct: 409 PGRSTAEGLSVGLCLEGRFFEDHQLLTVGALI 440 >gi|290580361|ref|YP_003484753.1| putative amidase [Streptococcus mutans NN2025] gi|254997260|dbj|BAH87861.1| putative amidase [Streptococcus mutans NN2025] Length = 480 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 135/510 (26%), Positives = 227/510 (44%), Gaps = 82/510 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ KD+S ELV I+ E N +NA +V+Q+ A +E+ +R G + G+P Sbjct: 13 VKQKDVSPRELVKWTIEKAEKHNPSLNA---IVSQRYERALQEARERDFTG--KPFAGVP 67 Query: 76 IGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD + G + + S +L +R + + L G ++LG+ N EF + ++ Sbjct: 68 LFLKDLGQEQAGELSTSGSRLLANYRASHSDNYVKSLEALGFIILGRTNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +G V D + G S G ++ +G + A+ +D GGSIR PASF G + Sbjct: 128 SSLHGQV----NLHDDVSRNAGGSSGGAAALVSSGVVTLAA-ASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISF----APSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLP 249 G+KPT GR +G SF S+ A +T+TVRD+ LL + E L Sbjct: 183 GLKPTRGRIP-VGPTSFRGWQGASVQFA--LTKTVRDTKRLLYYLQTCQMESPFVLPTLS 239 Query: 250 VPDYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 E+ L + ++ + P R +S + QQ + +L+ AG ++ E+S P Sbjct: 240 KESLEQPLKKKLKIAVLFDSPIASR---ISRSAISAVQQMVKFLEAAGHRVEEVSQPLNG 296 Query: 309 Y-ALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILE-----MYENTRSIGFGQEVKH 361 A+ +YYI++ E + A +DG+ L R D +E +Y++ GQ++ Sbjct: 297 IEAMKSYYIMNSVETA---AMFDGLAASLGRPLTLDDMEVMSWALYQS------GQKIPA 347 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA-----FPL 416 + +Y +D + R F + D+ILTPTT A F L Sbjct: 348 K----SYSKILNQWDQYSHR------------MTVFHEKYDLILTPTTAEVAPKHDQFQL 391 Query: 417 GKEENNSGSMGHIYN--------------------DVFTVAVNMAGLPAISVPAALCEKK 456 N + HI + FT N+ G PAIS+P ++ Sbjct: 392 SSTLEN--KLKHIADFDRNCQQELIWEMFADSLAWTPFTQQANLTGQPAISLPLYRDKQG 449 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 + LG+QL RE+ L ++ Q E+++ + Sbjct: 450 LSLGVQLTAAKGREDLLLALAQSFEEQSLF 479 >gi|228914543|ref|ZP_04078152.1| Amidase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844862|gb|EEM89904.1| Amidase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 536 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 135/517 (26%), Positives = 218/517 (42%), Gaps = 88/517 (17%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ V Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVTADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GT+T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAVGTETTGSIVAPATQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSI---QGMTVGIPKEYRLDYLSPTIDKTWQ 286 A+ GYDE D + V D ER D SI +G +G+ + +D + Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAE 356 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + L+DAGA + E YI NL + Y + D Sbjct: 357 KIRKDLQDAGAILTE-------------YIQLNNGGVDNLQT---LEYEFKHNVNDYFSQ 400 Query: 347 YENT------RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 +N I F ++ +R + Y + A + + K +F + + Sbjct: 401 QKNVPVKSLEEIIAFNKKDSNRRI---------KYGQTLIEASEKSAITKDEFEKVLQ-- 449 Query: 401 VDVILTPTTPTSAFPLGKE------ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 TS KE E ++ I N+ ++ +AG P ++VPA Sbjct: 450 ----------TSQENAKKELDRYLVEKGLDALVMINNEEVLLSA-VAGYPELAVPAGYDN 498 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G +G+ F E+ LF++G E+++ +P K Sbjct: 499 NGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|220921635|ref|YP_002496936.1| amidase [Methylobacterium nodulans ORS 2060] gi|219946241|gb|ACL56633.1| Amidase [Methylobacterium nodulans ORS 2060] Length = 463 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 132/480 (27%), Positives = 214/480 (44%), Gaps = 57/480 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R ++D+S VE++++ I +E + + A V +ARAAA ++ R G+A L+G+ Sbjct: 16 RYAARDLSPVEVMEAVIARVEAAEPSLRALYAFVPDEARAAARAAEARWRRGEALPLDGV 75 Query: 75 PIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P IK+ AT+G+ + D ++ +L + GA++ + M ++ M SS Sbjct: 76 PATIKENIATRGMPMPLGTAARRDAAPAAEDAPAAARLREAGAILFARTTMPDYGMLSSG 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +S++ +PW D T TPGGSS G+ AA A +GTD GGSIR PA + G Sbjct: 136 LSSFHPLARNPW---DRTK--TPGGSSAGAGAAAAAGYGPLHLGTDIGGSIRLPAGWCGI 190 Query: 194 VGIKPT----------YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 VG KP+ YGRC AG +TRT+ D+A+ ++ ++ D D Sbjct: 191 VGFKPSNGRVPIDPPYYGRC--------------AGPMTRTIADAALAMRELSRPDARDG 236 Query: 244 TCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVE 301 T + LP ALD + +G+ +G+ + + L+P + ++ L +GA + Sbjct: 237 TAL-LPAAIDWLALDGLNPKGLRLGLVLDAGVGLPLAPAVRAVVEEAGKRLAASGAVVEP 295 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ++ T+ L A S++ D R R + + T Sbjct: 296 VAPFLTRTMLDGLDTFWRQRAWSDIGALDPDR---RAAVLPFIRAWAET----------A 342 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R G V S S R R F D ++TP P AFP Sbjct: 343 RSFSGAAVFSGM---SQMAAMRDAALAAIRPF--------DFLITPVAPVPAFPAELPCP 391 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + FTVA NM+ PA+SVPA + + +P+GLQ++G F + + +G++ E Sbjct: 392 TDDPQRPFEHIGFTVAFNMSEQPALSVPAGITPEGLPVGLQIVGHRFDDLGVLRLGRLFE 451 >gi|167647675|ref|YP_001685338.1| amidase [Caulobacter sp. K31] gi|167350105|gb|ABZ72840.1| amidohydrolase, AtzE family [Caulobacter sp. K31] Length = 469 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 133/457 (29%), Positives = 207/457 (45%), Gaps = 42/457 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 NA+ V A +A A AE D + G L G+P +K+ F + + T A S I Sbjct: 38 FNAFTAVFAARALAQAEAIDADLSAGRPVGPLAGVPFAVKNLFDVQDVITIAGSRIRRNA 97 Query: 100 RP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGG 158 P +++T ++L GAV++G LNMDEFA G E ++ GP +P D T G Sbjct: 98 PPAAHDATAIRRLTAAGAVLVGALNMDEFAYGFVTENAHNGPTRNPH---DLTRIAG--G 152 Query: 159 SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA 218 SSGGS+AAV+G L ++G+DT GSIR PAS G G+KPT GR SR G F SLD Sbjct: 153 SSGGSAAAVSGGLVPLTLGSDTNGSIRIPASLCGVFGLKPTLGRLSRQGAFPFVESLDHV 212 Query: 219 GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYL 277 G R+V D A+ + G D D C + P L G + VG+ + Sbjct: 213 GPFARSVTDLALAYDLMQGPDPLDPLC-HRPAAPASPGLQAGADGPLRVGVLGGWFAQGA 271 Query: 278 SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 P + + + + DA + L + A A + ++P EA+ Sbjct: 272 FPEV----LEAVEIVADALQAQRGVELAGAEMARAAAFCLTPVEAA-------------H 314 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 + D+ TR + + V+ R++ G V + AR+ R + + + F Sbjct: 315 LHLDDL-----KTRPLDYDPAVRDRLLAGALVPEAVAE-----AARRYRPIFRDAARKLF 364 Query: 398 EQGVDVILTPTTPTSAFPLGKEE-NNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCE 454 E DV+L P + A +G+ G + ++ +T ++ GLP ++ P Sbjct: 365 ED-FDVLLAPASVCPAPGIGQATMAMDGQEVSVRKNLGAYTQPISYIGLPVVAAPVNR-P 422 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 K P+G+Q+I +RE+ + +E +AG H+ Sbjct: 423 GKPPIGVQIIAPAWREDLALAAALRLE-QAGVVAAHR 458 >gi|52784148|ref|YP_089977.1| hypothetical protein BLi00325 [Bacillus licheniformis ATCC 14580] gi|163119209|ref|YP_077569.2| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus licheniformis ATCC 14580] gi|319648929|ref|ZP_08003138.1| hypothetical protein HMPREF1012_04177 [Bacillus sp. BT1B_CT2] gi|52346650|gb|AAU39284.1| putative protein [Bacillus licheniformis ATCC 14580] gi|145902715|gb|AAU21931.2| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Bacillus licheniformis ATCC 14580] gi|317388923|gb|EFV69741.1| hypothetical protein HMPREF1012_04177 [Bacillus sp. BT1B_CT2] Length = 499 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 132/506 (26%), Positives = 219/506 (43%), Gaps = 79/506 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ +++ EL+D+ +E N ++NA I ++ + +++ D R + G+P Sbjct: 18 IKHGEVTVNELIDAAFSRLEEVNPELNAVIRTRKEQVKIESKQLDIR-----HQPFAGVP 72 Query: 76 IGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD A KG A + +L ++P +S KL G + LG+ N E+ + + +E Sbjct: 73 ILLKDISQALKGEPLTAGAKLLSSYKPKRDSNFVAKLRGAGFLFLGQTNTPEYGLKNISE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YGP +PW +TD ++PGGSSGGS+AAVA + + +D GGSIR PASFTG Sbjct: 133 PELYGPSRNPW----NTD-YSPGGSSGGSAAAVAAGIVPLAGASDGGGSIRIPASFTGLF 187 Query: 195 GIKPTYGRCSR---LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KPT GR G S+D +++RTVRDSA LL + A L Sbjct: 188 GLKPTRGRTPVGPGAGRQWQGASID--FVLSRTVRDSAALLDILQTIQPEAAFQTPLFPG 245 Query: 252 DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQ---QGISWLKDAGAKIVE------ 301 YE + + ++ + + E + +P D+ Q + + WL+ G + E Sbjct: 246 QYEEDMKKGLERPLKIAFSVESPVG--TPVSDEAKQAVRRTVRWLEAQGHHVEEQTNGVD 303 Query: 302 -ISLPHTQYALPAYYIISPAEASSN-LARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 I L + YY+++ E S+ L + + V+ +I+ N E Sbjct: 304 GIRL------MENYYLMNSGEISAMILGMEKTLGRAITVQDVEIVTWVLN--------EA 349 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK- 418 ++ + S +D + AF + D+ +TP T A +G+ Sbjct: 350 GKKVSAAEFTASLASWDRAAAQ------------MAAFHETYDLYVTPATAYPAPKVGEL 397 Query: 419 --------------EENNSGSMGHIYN--------DVFTVAVNMAGLPAISVPAALCEKK 456 E IY FT N+ G PA+SVP L + Sbjct: 398 THTEKEAEALLKVSELEKIEQQSLIYQMFLKSLTYTPFTQLANLTGQPAMSVPVHLTNEG 457 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEK 482 +PLG+Q+ +E L ++E+ Sbjct: 458 LPLGVQVTAPKGKEHWLLRTAHLLEQ 483 >gi|188583116|ref|YP_001926561.1| allophanate hydrolase [Methylobacterium populi BJ001] gi|179346614|gb|ACB82026.1| allophanate hydrolase [Methylobacterium populi BJ001] Length = 603 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 118/423 (27%), Positives = 183/423 (43%), Gaps = 40/423 (9%) Query: 67 DARDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + + L G+P +KD G+ T AC F P + ++L GA+++GK N+D Sbjct: 64 ETKPLWGVPFAVKDNVDVAGLPTTAACPDF--AFTPQASAPAVERLLAAGALLVGKTNLD 121 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 +FA G + Y PV P ++D PGGSS GS+ AVA L S+GTDT GS R Sbjct: 122 QFATGLVGVRTPY-PV--PRNAIDPA--VVPGGSSSGSAVAVARGLVGFSLGTDTAGSGR 176 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA VG+KP+ G S G++ +LD + TV ++ + + +AGYD D Sbjct: 177 VPAGLNNIVGLKPSLGSVSSRGVVPACRTLDTLSVFAGTVAEADAVYRIMAGYDAEDPYS 236 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDA-GAKIVEIS 303 +LP+P AL G+ VG+P R+ P + + ++ L+ G + I Sbjct: 237 RSLPLPPRPGALP---PGLRVGVPDAAGRIFGGDPQSETAFDASLADLQTVIGGEATAID 293 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 L +A+ P A RY +R + ++ TR+I I Sbjct: 294 L-APFFAVAQLLYAGPWVAE----RYQAIRGFIEARPD---SLHPTTRAI---------I 336 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 T ++ + Y R R TEA G+DV++ PT P P +E + Sbjct: 337 GAATAHSAADAFAGLY------RLAELRRATEAVWHGIDVLVVPTYPR---PRRVDELAA 387 Query: 424 GSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +G +T VN+ L A++VP P G+ LI + + +G + Sbjct: 388 DPIGPNSELGTYTNFVNLLDLCALAVPGRPRADGFPSGVTLIAPRGADGLIAELGARLHA 447 Query: 483 EAG 485 AG Sbjct: 448 AAG 450 >gi|119715464|ref|YP_922429.1| amidase [Nocardioides sp. JS614] gi|119536125|gb|ABL80742.1| Amidase [Nocardioides sp. JS614] Length = 466 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 131/497 (26%), Positives = 218/497 (43%), Gaps = 60/497 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ V+E+ + + SA +V+ + +E + +NA +++ A A A+ D Sbjct: 1 MTDLSRAGVAETARLVAGGEASARGVVEHALARMEERDRGLNAISQLLVDAAIAEAQARD 60 Query: 61 KRII-NGDARDLEGIPIGIKDCFATKGIHT----QACSHILDGFRPHYESTVTQKLWDNG 115 + ++ G L G+P+ IK+ G T +A S D ++ V ++L G Sbjct: 61 EALVAGGPIGPLHGVPVVIKEEIDVAGTVTTFGGEANSTPADA-----DAEVVRRLRAAG 115 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 AV++ K M EF E++ G +PW TPGGSSGG++ AV+ + A Sbjct: 116 AVIVAKTTMPEFGAFPFTESASRGVTRNPW-----DPSRTPGGSSGGTAVAVSAGMVPAG 170 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +G D GGSIR P++ G G+KP GR + +L AG +TR+V DSA++ AI Sbjct: 171 MGGDGGGSIRIPSASCGLFGLKPQRGRVTTAPHPHLWWALGTAGPLTRSVLDSALVYDAI 230 Query: 236 AGYDECDATCVNLPVPDYERA--------LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 G D P A + S++ +T+G+ R D P + + Sbjct: 231 RGNVAGDLYTAGGDEPFVAAAGREPGRLRIGWSVKPVTLGV----RPD---PVHVRAVED 283 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 L D G + E+ +Y P + A G+R E D +E + Sbjct: 284 TARLLTDLGHDVREVD---PRYPDPTAAFVPQFFA------------GIRTEA-DQVEHF 327 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 E + + +G++V + + D RA + + FE VDV+LTP Sbjct: 328 ER-----LERRTRETYRLGSWV-TPKVID----RALRTTEQVAAKANRVFED-VDVLLTP 376 Query: 408 TTPTSAFPLGKEENNS---GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 +G+ + S+ + + + N+AG PA SVP L +P+ +QL+ Sbjct: 377 AIAHRPPRVGRLDGVGTVRASLRAMPSIAYAALWNVAGNPAASVPCGLAADGLPVAVQLV 436 Query: 465 GQPFREETLFSVGQIIE 481 G+ E TLFS+ +E Sbjct: 437 GRTDDEATLFSLSAQLE 453 >gi|118477381|ref|YP_894532.1| amidase [Bacillus thuringiensis str. Al Hakam] gi|118416606|gb|ABK85025.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis str. Al Hakam] Length = 536 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 134/516 (25%), Positives = 217/516 (42%), Gaps = 86/516 (16%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIEDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ V Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVTADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GT+T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 A+ GYDE D + DY + L ++G +G+ + +D ++ Sbjct: 301 NAMIGYDEKDVMTEKVKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKAVAEKI 358 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 L+DAGA + + YI NL + Y + D + Sbjct: 359 RKDLQDAGAILTD-------------YIQLSNGGVDNLQT---LEYEFKHNVNDYFSQQK 402 Query: 349 NT------RSIGFGQE-VKHRIMIGTYVL-----SSRCYDSHYLRARKIRTLIKRDFTEA 396 N I F +E K RI G ++ S+ D + + K++ Sbjct: 403 NVPVKSLEEIIAFNKEDSKRRIKYGQTLIEESEKSAITKDEFEKVVQTSQENAKKELDRY 462 Query: 397 F-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 E+G+D ++ + EE V AV AG P ++VPA Sbjct: 463 LVEKGLDALVM---------INNEE------------VLLSAV--AGYPELAVPAGYDNN 499 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P+G +G+ F E+ LF++G E+++ +P K Sbjct: 500 GEPVGAVFVGKQFSEKELFNIGYAYEQQSKNRKPPK 535 >gi|169767442|ref|XP_001818192.1| N-acylethanolamine amidohydrolase [Aspergillus oryzae RIB40] gi|83766047|dbj|BAE56190.1| unnamed protein product [Aspergillus oryzae] Length = 609 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 122/488 (25%), Positives = 218/488 (44%), Gaps = 58/488 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +AV+E+ L +D E A+++ ++ RAAAE S KR Sbjct: 123 ELKPLAVAETLMPLIRRDA-------------ETPGKHSVAFLDSQVERVRAAAEASTKR 169 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST--VTQKLWDNGAVML 119 +G L+GIP+ +KD +G S + F + T +K + GA+++ Sbjct: 170 YKDGKPLGPLDGIPVVVKDEVHIEGYRRTLGSKL--DFTGEFTGTSWCVKKWEEAGAIIV 227 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N +G +P + GGSSGGS AV L ++G D Sbjct: 228 GKTTMHELGLDTNNNNPNHGTPRNP-----HNRNYYCGGSSGGSGYAVGAGLAPIALGAD 282 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--G 237 GGSIR P+SF G G+KP++GR S +S A ++ G + ++ D A+ + +A Sbjct: 283 GGGSIRIPSSFCGIWGLKPSHGRISGTPTVSLAQTVGVYGPMAASIDDLALAYRIMAAPA 342 Query: 238 YDECDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 E D + + P P + + T+GI +++ +D P + + + + + + G Sbjct: 343 PAEQDPSSASFPDPLTTLQVWSSKPRTKTIGIARDW-IDRAEPPVRAVFDRALDFYRKQG 401 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++++I++P+ A+ + E +S L D V GK Sbjct: 402 YEVIDITIPYLPEGQRAHILTIMTEIASGLTP-DQV-------GK-------------LS 440 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPTSAFP 415 K + +G + +S + +L ++++R++I F + +ILTPTTP + Sbjct: 441 APNKVLVSMGMWQISGQ----DFLASQRLRSIIMSHLAYLFGKHPGLLILTPTTPIPGWR 496 Query: 416 LGKEENNSGSM----GHIYNDVFTVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFRE 470 + E + S + + N + N G PAI+ PA + ++P+GL +G+ E Sbjct: 497 INGEADLSRGLSDGKSSVRNMEYVWLANFTGCPAINCPAGYVQDTRVPVGLMAMGEWGTE 556 Query: 471 ETLFSVGQ 478 E L + + Sbjct: 557 EDLIAFAR 564 >gi|298207776|ref|YP_003715955.1| amidase [Croceibacter atlanticus HTCC2559] gi|83850414|gb|EAP88282.1| amidase [Croceibacter atlanticus HTCC2559] Length = 542 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 156/311 (50%), Gaps = 49/311 (15%) Query: 13 RDRLRSKDISAVELVDSYIQAIE----NSNSQMNAYIEV---VAQKARAAAEESDKRIIN 65 ++ ++ + ++ +L Y++ I +S +NA I + V +ARA +++ Sbjct: 99 QNHIKERSLTYEDLTLFYLKRIYKFELDSTKTLNAIIALNDEVLNEARAKDKDT-----T 153 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + + G+PI +KD TKG+ T A + L ++ + + L NGA++LGKLN+ Sbjct: 154 TNKHPIFGMPILLKDNVNTKGMATTAGAVALKDNYTTEDAKLVENLKANGALILGKLNLS 213 Query: 126 EFA--------MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 E+A +G S + G ++P+ F GGSS GS A A A++G Sbjct: 214 EWAYYFCDGCPLGYS---AIGGQTLNPY----GRKAFETGGSSAGSGVATAANYAVATVG 266 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 ++T GSI P+S VG+KPT G S GII + +LD AG +T+ V D+AI+L A+ Sbjct: 267 SETAGSIISPSSQNSVVGLKPTIGVISGDGIIPISHTLDTAGPMTKNVTDNAIVLDAM-- 324 Query: 238 YDECDATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 T VN Y+ L++ S+ T G+ K RL D ++ + +++D+ Sbjct: 325 ------TSVN-----YKSILEENVSLTTKTFGVYK--RL-----LNDSIYKSTVKFIEDS 366 Query: 296 GAKIVEISLPH 306 GA IVE+ P Sbjct: 367 GATIVELDEPE 377 >gi|311103361|ref|YP_003976214.1| amidase [Achromobacter xylosoxidans A8] gi|310758050|gb|ADP13499.1| amidase family protein 2 [Achromobacter xylosoxidans A8] Length = 442 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 127/483 (26%), Positives = 220/483 (45%), Gaps = 64/483 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + LN + E+ +L+ ++++A +LV + IE S ++A+ + Q A A+ D+ Sbjct: 3 TALNRLGALEAARKLQRRELTAEQLVRACFARIEQRESTIHAWTALQKQAALDRAQALDR 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L G+P+G+KD F T + T+ S I + P ++ GA+++GK Sbjct: 63 GALQG---VLHGLPMGVKDLFDTVDLPTRYGSPIYERHHPGLDAASVALCRGAGAIVVGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EFA T GP +P + ++PGGSS GS+AAVA + ++GT T Sbjct: 120 TVTTEFA------TYQAGPTRNP-----RNEAYSPGGSSSGSAAAVADDMVPFALGTQTA 168 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 SI +PAS+ G VG KPT+G SR G+ S A SLD G R+V D A+ Sbjct: 169 ASIIRPASYCGIVGFKPTFGSISRAGVKSVAESLDTIGGFARSVPDVALF---------- 218 Query: 242 DATCVNLPVPDYERALDQSIQGMT-VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V + P R LD + G +G+ + + + P + + Q + L AGA + Sbjct: 219 --ASVLMRDP---RMLDLAYDGKPRIGMYRSLQWRHALPETKEAYAQAAAILSRAGAVVE 273 Query: 301 EISLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E+ LP L + I E S LA Y+ + + ++ K + +R Sbjct: 274 EVPLPPEHCVLVQLHADIMAFEVSQALA-YERLEHAAQLSPKIQAILEAGSR-------- 324 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +++ + + +RA + R + +A+ DV+L P+ A P Sbjct: 325 ----------ITAEEHQKNLMRAAESRARV-----DAWFDKYDVLLAPSASGEA-PFA-- 366 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + +G + F+ A + G P++S+P A + +P+GLQL+G + + ++ Sbjct: 367 DLGTG------DPQFSRAWTVFGHPSLSLPFATGPQGLPVGLQLVGARYSDHRTLAMAAW 420 Query: 480 IEK 482 + + Sbjct: 421 VHQ 423 >gi|15806631|ref|NP_295348.1| amidase [Deinococcus radiodurans R1] gi|6459389|gb|AAF11183.1|AE002005_12 amidase, putative [Deinococcus radiodurans R1] Length = 546 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 94/249 (37%), Positives = 133/249 (53%), Gaps = 16/249 (6%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 R D++ E+ +Y+ + N ++ A I V A+A A+ D I L G+P+ Sbjct: 87 RRGDLTPSEVTRTYLARLTAINPELRAVI-TVNPGAQATADALDD-IPEKQRGVLHGVPL 144 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGSS 132 IKD G+ T A S +L G P ++ + +L GAV+LGK NM E+A +G Sbjct: 145 LIKDNIDVAGLPTTAGSVLLRGHVPERDAPLVARLRAAGAVILGKANMTEWANFMTLGMP 204 Query: 133 NE-TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 N +S G ++PW T SS GS AVA LCAA+IGT+T GS+ PA Sbjct: 205 NGYSSLGGQTVNPWGPERDTGG-----SSSGSGVAVAARLCAAAIGTETSGSVVSPAHQN 259 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G +G+KPT G R GII + S D AG +TR+VRD+A+L+ ++G D+ DA L P Sbjct: 260 GVIGLKPTLGLIPRTGIIPISHSQDTAGPLTRSVRDAALLMTVMSGPDDADAAS-QLFTP 318 Query: 252 DY---ERAL 257 D E+AL Sbjct: 319 DLTVSEKAL 327 >gi|294667814|ref|ZP_06733024.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602440|gb|EFF45881.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 469 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 125/466 (26%), Positives = 200/466 (42%), Gaps = 57/466 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 RS+ A L + I +N ++ A ++ +A A A + G D L G+P Sbjct: 53 RSQPPLAARLATQTLTRINQANDRLCAITRLLPARAAADAARVQAALAGGSDGGALAGVP 112 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T A + + P ++ V Q+L + GAV++G NMDEFA G + Sbjct: 113 FVVKDLFDVAGQVTTAGAAVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEFAYGFATV 172 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P D+ GGSSGGS+AAVA L ++G+DT GSIR PA+ G Sbjct: 173 NAHYGTTANP-----HDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGIY 227 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PT+G G+ F +LD G +V D L+ + Y+ Sbjct: 228 GLRPTHGAVPLDGVFPFVDALDVVGPFATSVAD----LRRV-----------------YD 266 Query: 255 RALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 Q + G + RL + +D + G+ L A + I LP + A A Sbjct: 267 VLRGQPLPACHAGKLRVARLGGWFERNLDPDLEAGLQALLAACNSLSSIDLPEAERARAA 326 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ AE R+ R L G F + R++ G + +S Sbjct: 327 AFVLTAAEGGH---RH---RSALTAHGAQ------------FDPATRDRLLAGLQLPASA 368 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---NNSGSMGHIY 430 D+H D A VDV++ P TP A + ++ ++ Sbjct: 369 VADAHRF------AQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDDLPVSARAN 422 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 +FT + +A P ++ P ++PLG+QLI P RE+ LF++ Sbjct: 423 LGIFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFAL 467 >gi|144900956|emb|CAM77820.1| Urea amidolyase [Magnetospirillum gryphiswaldense MSR-1] Length = 587 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 114/424 (26%), Positives = 182/424 (42%), Gaps = 61/424 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP +KD G+ T A C + PH +TV ++L GA+++GK N+D+FA Sbjct: 61 LWGIPFAVKDNIDVVGLPTTAGCPDF--AYDPHRSATVVERLQAEGAILVGKTNLDQFAT 118 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG + S S D + GS+ +A + F S+GTDT GS R PA+ Sbjct: 119 GLVGTRSPYG-ICSSVFSPDHVSGGSSSGSAVAVAAGLVSF----SLGTDTAGSGRVPAA 173 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL- 248 F VG+KP+ G S G++ SLD I T D+ +L YD D+ N Sbjct: 174 FNNIVGLKPSKGLISNRGLVPACRSLDCISIFAGTCADALAVLDVAGAYDPEDSFSRNAA 233 Query: 249 ---PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P PD G G+P + + + Q + L+ G + VEI Sbjct: 234 QAGPWPD----------GFRFGVPMGKLEFFGDDQAEALFAQAVERLQTLGGQKVEIDF- 282 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 T ++ A + S + LA D + T+ + V+ I+ Sbjct: 283 -TPFSQCAQLLYSGPWVAERLAAIDD---------------FATTKPESLHEVVRGIILG 326 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-------AFPLGK 418 + ++ + Y A IR EA +DV+L PTT T+ A P+ + Sbjct: 327 AKGISAADGFKGFYRLAELIRQ------AEAEWAKMDVMLLPTTGTTYRIDEVLADPV-R 379 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +N G+ +T VN+ L AI++PA +P G+ L+G+ F+++ + ++ Sbjct: 380 LNSNLGA--------YTNFVNLMDLSAIAIPAGFRPNGLPFGITLMGRAFQDDAIAALAD 431 Query: 479 IIEK 482 + + Sbjct: 432 RLHR 435 >gi|296162354|ref|ZP_06845147.1| Amidase [Burkholderia sp. Ch1-1] gi|295887387|gb|EFG67212.1| Amidase [Burkholderia sp. Ch1-1] Length = 508 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 130/517 (25%), Positives = 212/517 (41%), Gaps = 49/517 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V + ++ +A +L + IE N + NA I + A ++R Sbjct: 10 DLDALTVEAVQAGFKAGTFTAEQLARACFARIERDNGKYNAVIFLNPAAIDDARRIDERR 69 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNGA 116 L G+P+ IKD G T A L P ++ V ++ GA Sbjct: 70 AAGEPLGPLAGVPVVIKDPMDMVGFPTTAGWAKLYSKKGGVDLMPERDAPVVARMRRAGA 129 Query: 117 VMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 ++LGK N+ + GS S+ GP I+ + D+ PGGSS G+++AVA + Sbjct: 130 ILLGKTNVPILSHTGSHANDSWAGPTIN----VVMPDR-VPGGSSAGTASAVASCMAVLG 184 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 + +TGGSI+ PAS VGIKPT G G++ + + D G I R VRD+A+ L + Sbjct: 185 LAEETGGSIQNPASAQNLVGIKPTIGLVPNAGVVPLSGNRDVVGPIARNVRDAALCLDVL 244 Query: 236 AGYDECD----ATCVNLPVPDYERALD-QSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGI 289 AGY D A+ P Y ALD +++ G +G+ +R LS +++ Sbjct: 245 AGYSSEDPKTLASVGRQPEGGYTAALDPKALNGKRIGLYGPGWRNQPLSDEAAVLYERVK 304 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL-AR------YDGVRYGLRVEGKD 342 L GA +V+ + +A + P ++ AR YD +Y R+ Sbjct: 305 GELVGLGAILVDDPFAGSGFA----ELRKPTPPLAHFDARGLESIPYDLEKYLQRLGKHA 360 Query: 343 ILEMYENTRSIGFGQEV---------KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 L+ + + G +V H + L+ +++ R F Sbjct: 361 SLKTFAEFAAATKGDDVFGAQGILRYMHSLADFKAALADPSVPPEMPEFVEVKARYLRIF 420 Query: 394 TEAFE-QGVDVILTPTTPTSAFPL-GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 + Q +D ++ P L GK+ ++G I N+AGLP I+VPA Sbjct: 421 NAVMDAQRLDALVFPQMRGELPALHGKDVIQETTVGEI---------NIAGLPGIAVPAG 471 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 P G+ +G+ + E L E G R Sbjct: 472 FYASGAPFGVIFVGRQWDEGALLGFAYAYELGVGRGR 508 >gi|121604659|ref|YP_981988.1| amidase [Polaromonas naphthalenivorans CJ2] gi|120593628|gb|ABM37067.1| Amidase [Polaromonas naphthalenivorans CJ2] Length = 450 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 113/422 (26%), Positives = 184/422 (43%), Gaps = 47/422 (11%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLN 123 N A L GIP+ +KD F G T A S +L G P ++ +L GAV++G+ N Sbjct: 64 NDPAFALTGIPVSVKDLFDVAGQVTTAGSTVLAGAAPASTDAVAVARLRAAGAVLVGRSN 123 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 M EFA +YG ++P D++ + PGGSS G++ +VA +G+DTGGS Sbjct: 124 MVEFAFSGVGINPHYGTPVNP---ADASIERIPGGSSSGAAVSVATGAALVGLGSDTGGS 180 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 IR PA+ G VG K T G + + SLD +TR+V D A+ ++ A Sbjct: 181 IRIPAALCGIVGFKSTARLVPATGAVPLSTSLDTVCAVTRSVHD------AVTVHEVLSA 234 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 V L + + + + + D L T+ + ++ + L+ AGA+I EI+ Sbjct: 235 RRVQLA--------GKPLSSCRIAVARTLMQDGLDSTVAQAFEHSLRVLRQAGARIEEIA 286 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 L +S AS L+ + + + ++ +E + V RI Sbjct: 287 LEEIGE-------LSAINASGGLSAAESHAW-----HRKLIAEHEAQ----YDPRVALRI 330 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + ++ D L AR+ I R EA D +L+PT P A + ++ Sbjct: 331 LRGARMSAADYID--LLAARQ--NWISR--MEARLSHFDAVLSPTVPIVAPSIASVLDHD 384 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQI 479 I + T NM AIS+P C+ ++P+GL L ++ + + Sbjct: 385 DEFFRINALLLRNTSVANMLDGCAISIP---CQTPGQLPVGLMLWHAALHDDNVLDLALQ 441 Query: 480 IE 481 +E Sbjct: 442 VE 443 >gi|84994021|gb|ABC68347.1| unknown [Pseudomonas putida] Length = 485 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 126/488 (25%), Positives = 218/488 (44%), Gaps = 48/488 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDARD-LEG 73 + ++ +S E++ +Y+ IE N ++NA + + A A A++ D+ + G +R + G Sbjct: 21 IHARQLSCREVMQAYLVHIERCNPRVNALVSLRPAAALLAEADQRDRELARGHSRGWMHG 80 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT G+ T S + P +++ ++ +GA+++GK N+ EF +GS + Sbjct: 81 MPQAIKDLAATAGLRTTLGSPLFADQVPQHDAISVARVRASGALIVGKSNVPEFGLGSQS 140 Query: 134 ETSYYGPVISPWRSMDSTDKFTP----GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + +G +T+ + P GGSSGG++AA+A L + G+D GS+R PA+ Sbjct: 141 YNTLFG---------TTTNAYDPTRVAGGSSGGAAAALAMRLLPVADGSDMMGSLRNPAA 191 Query: 190 FTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 F G++P+ GR F L G + R+V D A LL AG D ++ Sbjct: 192 FNNVFGLRPSQGRVPHGPAPELFVQQLATEGPMGRSVTDVARLLSVQAGADARAPLALSE 251 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D+ L + ++G+ VG +Y YL P D +S + A A E+ + Sbjct: 252 GRRDFAAGLQRDLRGVRVGWLGDYN-GYL-PMDDGV----MSLCESALADFAELGC-RVE 304 Query: 309 YALPAYYIISPAEASSNLAR----YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PA+ +LAR + R+ L V G + R E + + Sbjct: 305 ACQPAF----------DLARLWQCWLTHRHFL-VHGNLSAAYADPARRTLLKPEAQWEVE 353 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--EENN 422 G + ++ Y + R+ R + E FE D +L P+ F G + Sbjct: 354 GGLQLSAAALYQASLDRSDWYRAM-----AELFEHH-DFLLLPSAQVFPFDAGLPWPQRV 407 Query: 423 SGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 G Y+ V + +AGLP++SVP +P+GLQ+IG + + + Sbjct: 408 GGRPMDTYHRWMEVVIGPTLAGLPSMSVPIGFNPGGLPMGLQIIGPAQADHAVLQLAYAH 467 Query: 481 EKEAGYFR 488 E+ G+ + Sbjct: 468 EQLTGWVQ 475 >gi|316934348|ref|YP_004109330.1| amidase [Rhodopseudomonas palustris DX-1] gi|315602062|gb|ADU44597.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 425 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 213/488 (43%), Gaps = 78/488 (15%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +AV + R +S + + + IQ + + A+ R A++ Sbjct: 5 LGLLAVHRA---FREGTLSPADYLATCIQRADEVEPWLKAFCH------RLPADQ----- 50 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + G L G+PIG+KD AT GI T S + P ++ + ++ G ++ GK Sbjct: 51 LAGGEGPLAGVPIGVKDIIATAGIPTTNGSRVYADHVPDQDAPIVARIKQLGGIVFGKTV 110 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EFA S GP ++P + TPGGSS GS+AAVA + ++GT T GS Sbjct: 111 STEFAWRSP------GPTVNP-----HNPQHTPGGSSSGSAAAVAAGIVPMALGTQTVGS 159 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 + +PA++ G VG KP++G R G+ A SLD G +TR+V D+A +A + A Sbjct: 160 VVRPAAYCGIVGFKPSFGAIVRDGVHPLAQSLDHVGFLTRSVEDAAFAFGLLADGADAGA 219 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI--------DKTWQQGISWLKDA 295 Q+++G + RL + P I ++ ++ + L+ A Sbjct: 220 A-------------AQAVEGDVLPAASSLRLGVVRPPIWDRVSAEQNQAFEAALDTLRRA 266 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA + ++LP + + A+ A ++ +++ + + S Sbjct: 267 GASVEPLALPERYWQ--GFEAAEIILAAEAAAIFN-----------ELVTQHPDLTS--- 310 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 ++K ++ G + + R Y+ AR+++ ++++ G+D ILT P A P Sbjct: 311 -PQLKELVVAGNAISAPR-----YIWARQLQASLQQELPRHLS-GLDGILTAPAPGEA-P 362 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 G S F M G+PA+++P A + +PLGLQ+IG + L Sbjct: 363 EGLAYTGDAS--------FCALWTMLGVPALTMPIARSARGLPLGLQVIGGFGEDARLLR 414 Query: 476 VGQIIEKE 483 +++E + Sbjct: 415 TARVVEAQ 422 >gi|156040583|ref|XP_001587278.1| hypothetical protein SS1G_12308 [Sclerotinia sclerotiorum 1980] gi|154696364|gb|EDN96102.1| hypothetical protein SS1G_12308 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1244 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 125/498 (25%), Positives = 212/498 (42%), Gaps = 72/498 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L +AV+ES L +DIS E A+ E ++ AA+ S R Sbjct: 763 KLTPLAVAESLLPLIRRDISLKE-------------PHSVAFTESNVKEILKAAKASTLR 809 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDG-FRPHYESTVTQKLWDN-GAVML 119 G+ L+G+P GIKD G + D F +ST + W+N GA+++ Sbjct: 810 YQQGNPLSILDGVPTGIKDDSDVAGYRSHHGRKRNDSMFTAAEKSTWIVQQWENSGALIM 869 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GKLNM E ++N ++G +P D + PGGSSGG + AV+ L ++G+D Sbjct: 870 GKLNMHELGSDTTNNNPHWGTPKNP-----HNDHYYPGGSSGGPAYAVSSGLIPFALGSD 924 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+SF G G+KP++ R G ++ G + T+ D + + +A + Sbjct: 925 GGGSIRIPSSFCGLYGLKPSHSRVEDTG-----STVTVNGPLAATMADLEVAYRVMAKPN 979 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAK 298 D P + + Q +GI K++ D P++ + + + K G Sbjct: 980 PSDPVAALFSPPGSFK----TAQPKVIGIYKDW-FDRAEPSVHTLCTKFVDYCEKTLGYT 1034 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV I++P+ A+ + A +S + + L+ + I Sbjct: 1035 IVPITIPYCPEGQLAHAMTILANMASRAKTHP-------FSPMNWLQDASPSNKI----- 1082 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPL 416 + +G Y + YL A+++R L+ + + F++ G+ +I+TPTTP + + Sbjct: 1083 ---LLTMGAYTPA-----RDYLLAQQLRNLLMQHLSFLFKKYPGL-IIVTPTTPIPGWQI 1133 Query: 417 GKEENNSGSMGH--------IYNDVFTVAVNMAGLPAISVPAALC-----EKKMPLGLQL 463 E G + H + N + N G+P I+ P E K+P+G+ Sbjct: 1134 EHE----GDLLHGAFDPNKSLRNMEYVWLANFTGIPGINCPVGYVDPKKGEGKIPVGIMG 1189 Query: 464 IGQPFREETLFSVGQIIE 481 + EE L G+ E Sbjct: 1190 STEWGGEEVLIEFGKEAE 1207 >gi|152997214|ref|YP_001342049.1| amidase [Marinomonas sp. MWYL1] gi|150838138|gb|ABR72114.1| Amidase [Marinomonas sp. MWYL1] Length = 468 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 121/479 (25%), Positives = 204/479 (42%), Gaps = 39/479 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+ E +K++S VE V + + I N +NAY + ++A +A++S+ R G Sbjct: 12 MSAVELTQLFETKELSPVEAVKASFERINKCNPLVNAYCYLAEEEAIQSAKDSEARWFKG 71 Query: 67 -DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 ++G+P IKD + G + S +++ + K+ GAV+LGK Sbjct: 72 MPLSRIDGVPSSIKDLTSVAGWPNRNGSLTSSTSVMSFDAPFSLKMKQAGAVILGKTTTP 131 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF ++ G +PW++ S G + +SA G L AS D GGSIR Sbjct: 132 EFGWKGVTDSRLTGITRNPWKT--SQTSGGSSGGAAAASALNMGVLHQAS---DAGGSIR 186 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF G G+KPT+G + S +L G ITRTV+DS +++ +A D D Sbjct: 187 IPASFCGVFGLKPTFGYIPQWPASSMT-TLSHLGPITRTVQDSLLMMDIVATPDTRDWYA 245 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + + G+ + + P + K + L++ GA+I + Sbjct: 246 TRIFNGIWSNHTCSPLAGVKIAYSPTLGYVDVDPNVLKLVDIAVKKLEEMGAQIDLVD-- 303 Query: 306 HTQYALPAYYIISPAEASSNLARYDG---VRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P + P + S L + G V G + D+L+ + + G++ K Sbjct: 304 ------PGFE--DPVDIFSTL-WFSGAAKVVSGFSQQQCDLLD----SGFLAIGEKGKAI 350 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 ++ V + R RA R + + F DV++TPT P +AF GK Sbjct: 351 DIVDYMVATDR-------RADLGRIM------QEFHARYDVLITPTLPRTAFEAGKNTET 397 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + F+ N+ PA+SVP + +P+GLQ+I + ++ + IE Sbjct: 398 EQQKDWMEWTPFSYPFNLTQQPALSVPCGHVD-GLPVGLQVIADRGNDLLAMNIAKHIE 455 >gi|229043711|ref|ZP_04191415.1| Amidase [Bacillus cereus AH676] gi|228725639|gb|EEL76892.1| Amidase [Bacillus cereus AH676] Length = 536 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 127/496 (25%), Positives = 220/496 (44%), Gaps = 60/496 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDEKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 ++ +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KNS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR II A +LD AG + RTV+D A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTEIIPLAETLDTAGPMARTVKDVATLFNAMIGYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E D + DY + L ++G +G+ + +D ++ L+DA Sbjct: 308 EKDVMTEKMKDKERIDYTKDLSIDGLKGKKIGLL--FSVDQQDENRKVVVEKIRKDLQDA 365 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT----- 350 GA + + I AE NL + Y + D L +N Sbjct: 366 GAILTD-------------NIQLSAEGVDNLQT---LEYEFKHNVNDYLSQQKNVPVKSL 409 Query: 351 -RSIGFG-QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 I F ++ K RI G ++ + + + +++ A ++ +D L Sbjct: 410 EEIIAFNKKDSKRRIKYGQTLIEGS--EKSAITKEEFENVVQTSQENARKE-LDRYLV-- 464 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 E ++ I ND ++ +AG P ++VPA + P+G+ +G+ F Sbjct: 465 -----------EKGLDALVMINNDEVLLSA-VAGYPELAVPAGYDKNGEPIGVVFVGKQF 512 Query: 469 REETLFSVGQIIEKEA 484 E+ LF++G E+++ Sbjct: 513 GEKELFNIGYAYEQQS 528 >gi|327348677|gb|EGE77534.1| amidase [Ajellomyces dermatitidis ATCC 18188] Length = 622 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 117/242 (48%), Gaps = 17/242 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ +++ + L S+ S +L Y++ I N + A IEV A +R Sbjct: 62 DIEGLSIPQLHKCLESRKFSVYDLTACYLERIRRVNRVLKAVIEVNPDALDIAMMMDRER 121 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + L GIP +KD TK + T A S +L G ++ V L GAV+LG Sbjct: 122 EQRRNHGLLHGIPFLVKDTMGTKDKMQTTAGSSVLVGTVVPEDAHVVSLLRRAGAVLLGH 181 Query: 122 LNMDEFAMGSSNETSYY--------GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 N+ E+A S ++YY G +P+ + PGGSS GS+ AVA +CA Sbjct: 182 ANLSEWA---SMRSTYYSEGYSSRGGQCRNPYNLAEH-----PGGSSCGSAVAVASNMCA 233 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 S+GT+T GSI PA G VGIKPT G G+I + SLD G RTV D+AI L Sbjct: 234 FSLGTETDGSIMVPADRNGIVGIKPTVGLTCGKGVIPESHSLDSVGTFGRTVLDAAIALD 293 Query: 234 AI 235 I Sbjct: 294 GI 295 >gi|322709036|gb|EFZ00613.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Metarhizium anisopliae ARSEF 23] Length = 549 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 99/322 (30%), Positives = 161/322 (50%), Gaps = 34/322 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRII 64 + E R L + ++V+L +YI I+ +++A E+ ++ AR A +K Sbjct: 40 LDELRHGLDAGRFTSVDLTKAYIARIQEVADELHAVNEINPDALSIAARMDAARKNKTAC 99 Query: 65 NGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 + L GIP+ IKD AT ++ A S L G +P +ST+ KL G ++LGK N Sbjct: 100 SRGP--LYGIPVLIKDNIATLDKMNNTAGSFALVGAQPKEDSTIAAKLRKAGVIILGKAN 157 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFT------PGGSSGGSSAAVAGFLCAASIG 177 + ++A S+ TS S W + K P GSS GS + + L A++G Sbjct: 158 LSQWANWRSSNTS------SGWSAYGGQTKGAYLRDQDPSGSSSGSGVSSSIGLAWAALG 211 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI P++ VGIKP+ G SR ++ + D G + RTV+D+A LL AIAG Sbjct: 212 TETDGSIISPSNVNNIVGIKPSVGLTSRYLVVPISSHQDTVGPMARTVKDAAYLLSAIAG 271 Query: 238 YDECDATCVNLP----VPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTID-----KTWQQ 287 D+ D +P +PDY A D + G +G+P+ L+P+ D + +++ Sbjct: 272 ADKNDNYTSAIPFKERLPDYVAACKDDGLSGKRIGVPR----GLLTPSQDTSPLLQAFEK 327 Query: 288 GISWLKDAGAKIV-EISLPHTQ 308 + L+ A IV ++ +P ++ Sbjct: 328 ALGVLRSGNATIVDDVEIPGSE 349 >gi|307730656|ref|YP_003907880.1| Amidase [Burkholderia sp. CCGE1003] gi|307585191|gb|ADN58589.1| Amidase [Burkholderia sp. CCGE1003] Length = 459 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/280 (32%), Positives = 141/280 (50%), Gaps = 16/280 (5%) Query: 26 LVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFA 83 LV++ + I + Q A++ V A AR AA+ D+ G L GIP+ +KD F Sbjct: 28 LVETALTRIADPAGQGALAFMHVDADGARQAADAHDRLRAAGTVLSPLAGIPVSVKDLFD 87 Query: 84 TKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 +G T+A S +L P + V +L GAV++G+ NM EFA +YG + Sbjct: 88 IQGQRTRAGSTVLADAPPAAQDAVAVARLKRAGAVIVGRTNMSEFAFSGLGLNPHYGNPL 147 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 SP+R D+ GGSS G++A+VA + A ++GTDTGGSIR PA+ G G KPT R Sbjct: 148 SPYRRDVKGDERISGGSSSGAAASVADGMAAVALGTDTGGSIRIPAALCGLTGFKPTAAR 207 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 + G + + +LD G I +V A++ + +AG + P A + ++ Sbjct: 208 IPKQGGVPLSSTLDSFGPIGVSVACCALVDRMLAGLE-----------PRVPAA--RPLE 254 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 G+ +G+ Y D + P + + L+ AGA + E+ Sbjct: 255 GVRLGVLTNYVTDGVEPAVAAAVDTALKHLEAAGAIVSEV 294 >gi|299536276|ref|ZP_07049589.1| amidase [Lysinibacillus fusiformis ZC1] gi|298728262|gb|EFI68824.1| amidase [Lysinibacillus fusiformis ZC1] Length = 486 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 125/490 (25%), Positives = 223/490 (45%), Gaps = 61/490 (12%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + ++SK+++ EL + ++ I+ N +NA + V+ ++A A E+ D+ G Sbjct: 16 ELVKSKEVTPQELKELALEGIKKVNPSINAVVSVLEEQADKAIEKVDEN------APFAG 69 Query: 74 IPIGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P IK+ +G+ S I + +S + + G ++ G EF ++ Sbjct: 70 VPFLIKELVLHAEGVSHSMGSRIGENTVIPVDSELMARFRKAGLILAGTTTTPEFGYNAA 129 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E YG +PW S SSGGS+AAVA + + D GGSIR PAS +G Sbjct: 130 TEAVIYGATRNPWNLTHSPGG-----SSGGSAAAVASGIVPIAHANDGGGSIRIPASCSG 184 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLP 249 VG+KPT GR G + P L+ I +TRT+RD+A+LL +AG D + + + Sbjct: 185 LVGLKPTRGRVPA-GPFNSEP-LNGIAIEFAVTRTIRDTAVLLDQVAGPDLGSYSKLEVT 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 Y + + ++++ + + E ++ P + + + LK+ G ++VE Sbjct: 243 HAPYGQLIQETVRPLKIAWTTETNSGAFVDPECIEAVHKTVQVLKELGHEVVE------- 295 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A P Y S +A+ + + +I M + + G G+ V Y Sbjct: 296 -ARPKYEQASFTKAT------------VAIWTANIYHMIKGAAA-GTGKAVSPD-----Y 336 Query: 369 VLSS--RCYD-------SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + ++ +CY+ + L A ++ R FE D++L+PT T +G+ Sbjct: 337 IEAAIWKCYEYGGQLKAADLLEAIHTNAVVSRQVAGFFED-YDILLSPTIGTLPAKIGEL 395 Query: 420 ENNSGSMGHI--YNDVFTVA-----VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 N+ ++ + +FT A N G P+IS+P A + +P+GLQ+ G+ E T Sbjct: 396 NANNPNISAVEWTEQIFTYAPFTNLFNATGQPSISLPLAESKSGLPIGLQMTGKFADEWT 455 Query: 473 LFSVGQIIEK 482 L +G+ +E+ Sbjct: 456 LLQLGRQLEE 465 >gi|70728726|ref|YP_258475.1| amidase [Pseudomonas fluorescens Pf-5] gi|68343025|gb|AAY90631.1| amidase family protein [Pseudomonas fluorescens Pf-5] Length = 487 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 143/279 (51%), Gaps = 23/279 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDK 61 +L+ +A+S + + ++++S E++ +Y+ IE N +NA + + +A A+E D+ Sbjct: 15 DLDALALSRA---IHARELSCREVMQAYLAQIERCNPLVNALVSLGDPEALLEQADERDR 71 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G + + G+P IKD AT G+ T S + P ++ ++ +GA+++G Sbjct: 72 QLAQGQSMGWMHGMPQAIKDLAATAGMTTSMGSPLFAEHVPQGDAISVARVRASGAIIVG 131 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF +GS +G + + DST GGSSGG++ A+A + + G+D Sbjct: 132 KSNVPEFGLGSHTYNQLFGTTGN---AYDST--LCAGGSSGGAAVALALRMLPVADGSDM 186 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS-------LDQAGIITRTVRDSAILLK 233 GS+R PA+F G++P+ GR + F P+ L G + RTV D A LL Sbjct: 187 MGSLRNPAAFNNVFGMRPSQGR------VPFGPTPELFVQQLATEGPMGRTVADVARLLG 240 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY 272 AG+D + E AL ++++G+ +G +Y Sbjct: 241 TQAGFDARAPLSLKDLSAQPEAALQRNVKGLRLGWLGDY 279 >gi|315500614|ref|YP_004089416.1| allophanate hydrolase [Asticcacaulis excentricus CB 48] gi|315418626|gb|ADU15265.1| allophanate hydrolase [Asticcacaulis excentricus CB 48] Length = 586 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 133/498 (26%), Positives = 199/498 (39%), Gaps = 62/498 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAI-ENSNSQMNAYI-EVVAQKARAAAEESDK 61 ++ + ++ D + S SA+ +V+ I + E Q A+I A+ RA A + D Sbjct: 1 MDRLHAAQIADAVNSGQTSALAVVEDVIARLAEYDEVQPQAWISRAEAETLRARARDIDA 60 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G L G+P +KD G T A C + +TV QK D GA+++G Sbjct: 61 QVKAGTHLPLAGVPFAVKDNIDAIGFDTTAGCPDY--AYAATSNATVVQKALDAGAILVG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+D+FA G + S YG +P + + GGSS GS+ A L A + GTDT Sbjct: 119 KTNLDQFATGLNGSRSPYG---APRCVFNRA--YVSGGSSSGSAVTTAAGLVAFAFGTDT 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS R PA+F G KPT GR S G++ +LD + T +D+A++ + GYD Sbjct: 174 AGSGRVPAAFNHLTGYKPTKGRWSTTGLVPACRTLDCISVFTEDPKDAALVDSVVGGYDA 233 Query: 241 CDATCVNLP-VPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D +LP V R + + Q G I EY + + + L G + Sbjct: 234 KDEYSRDLPPVARPVRRIGVASQLNWCGDIHSEY-----------LYARALERLIGMGFE 282 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 +VEI L A Y P A A D + Sbjct: 283 VVEIDLAPLSAAAALLYS-GPWVAERTAAIAD----------------FLKASPASIDST 325 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT------- 411 V+ + G V +D HY A R + E +D+++ PT PT Sbjct: 326 VRQIVEGGLTVTGVETFDGHYKLAGYKR------YAEELWDDIDILMLPTAPTIYRVKEM 379 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 A PL N +G ++T VN+ + A++VPA G+ IG + Sbjct: 380 QASPLALNAN----LG-----LYTNFVNLLDMAAVAVPAGFRPNGTGFGITFIGSAATDN 430 Query: 472 TLFSVGQIIEKEAGYFRP 489 L Y RP Sbjct: 431 ALLDFASQWNGHNAYARP 448 >gi|229541675|ref|ZP_04430735.1| Amidase [Bacillus coagulans 36D1] gi|229326095|gb|EEN91770.1| Amidase [Bacillus coagulans 36D1] Length = 495 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 137/513 (26%), Positives = 221/513 (43%), Gaps = 94/513 (18%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ K++S E++++ + IE +N ++NA I +KA+ A + D + G+P Sbjct: 18 VKRKEVSVEEVLEAAMARIEKTNRRLNAVIRTRFEKAKKEAA-----TLRTDEQPFAGVP 72 Query: 76 IGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD A KG + S +L R ++ T KL + G ++LG N+ EF + + E Sbjct: 73 ILLKDLSQAVKGELLTSGSKLLQQNRAREDAFFTAKLKEAGFIILGHTNVPEFGLKNITE 132 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YGP +PW F+PGGSSGGS+AAVA + + +D GGSIR PASFT Sbjct: 133 PELYGPARNPW-----NPHFSPGGSSGGSAAAVASGMVPVAGASDGGGSIRIPASFTSLT 187 Query: 195 GIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 G+KPT GR + I F ++ +TVRDSA LL + + A Sbjct: 188 GLKPTRGRTPVGPGRGRQWQGAAIDF--------VLAKTVRDSAALLDVLQTVEPAAAFQ 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPT---IDKTWQQGI----SWLKDAG 296 L P Y + L++S K+YR+ + SP + + +Q + WL+ G Sbjct: 240 TPL-FPGYVKELERSGT-------KKYRIAFSVESPVGTPVSRDAKQAVYKTAKWLEQEG 291 Query: 297 AKIVEI-SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + E + + + YY+++ E ++ L+ + E KD+ + + G Sbjct: 292 HLVEEAKNGVDGRRLMENYYLMNCGEMAAELSDLESALRRPLTE-KDMEPVSWVLYAAG- 349 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + Y S +D + AF + D+ +TP+T AFP Sbjct: 350 -----KNVTAAEYAKSLAEWDKAAAQ------------MAAFHETYDLYITPST---AFP 389 Query: 416 ---------LGKEEN---------NSGSMGHIYN--------DVFTVAVNMAGLPAISVP 449 GKE + +Y+ FT N+ G PAIS+P Sbjct: 390 APKIGELTQTGKERDRLFGVTGLPKEKQQALVYDMFEPSLTFSPFTQLANLTGQPAISLP 449 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +PLG+QL+ E L V +E+ Sbjct: 450 VHVTAAGLPLGVQLVAPKGNEHWLLDVAYALEQ 482 >gi|152987970|ref|YP_001345681.1| amidase [Pseudomonas aeruginosa PA7] gi|150963128|gb|ABR85153.1| probable amidase [Pseudomonas aeruginosa PA7] Length = 485 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 123/499 (24%), Positives = 219/499 (43%), Gaps = 42/499 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEES 59 ++EL + + +R+R + +S E++ +Y+ IE N ++NA + ++ A++ A A Sbjct: 7 INELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFNPRVNALVSLLPAERLLAEAAAR 66 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D + +G R + G+P IKD T+GI T S + + P + + +++ GA++ Sbjct: 67 DDELAHGQYRGWMHGLPHAIKDLSLTRGIRTTLGSPLYRDYVPERDGIMVERIRAAGAIL 126 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N EF +GS +G + ++ + GGSSGG++AA+A L + G+ Sbjct: 127 IGKTNTPEFGLGSQTYNPLFGATACAY-----DERLSAGGSSGGAAAALALHLVPVADGS 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAG 237 D GS+R PA+F +G +P+ GR F L G + R+VRD+A+LL AG Sbjct: 182 DMMGSLRNPAAFNNVIGFRPSQGRVPFDDSADLFFDQLGYEGPMGRSVRDTALLLSVQAG 241 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKD 294 D + P + L++ G +G + LD P D + Q+ + + Sbjct: 242 ADRRAPLSIAEPGASFAAPLERDFAGTRLGWLGD--LDGYLPMQDGILQLCQRALGDFRS 299 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G ++ E +L L + +R+ L V G + + Sbjct: 300 LGCEVEEAALGFAPERL--------------WESWRTLRHWL-VAGSLGALHADPAKRTQ 344 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 E + G + + Y RA IR+ R FE+ D +L P+ F Sbjct: 345 LKPEALWEVENGLRLGADAVY-----RASVIRSDWYRAIGRLFER-YDYLLLPS--AQVF 396 Query: 415 PLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P KE S+ + D + V +++G P +V A + +P+GLQ+IG Sbjct: 397 PFAKEIPWPRSIEGVAMDTYHRWMEVVVPGSLSGCPVANVQAGFNAEGLPMGLQIIGPHQ 456 Query: 469 REETLFSVGQIIEKEAGYF 487 + + + E+ + +F Sbjct: 457 ADFAVLQLAHAYEQASRWF 475 >gi|224078165|ref|XP_002305497.1| predicted protein [Populus trichocarpa] gi|222848461|gb|EEE86008.1| predicted protein [Populus trichocarpa] Length = 518 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 149/304 (49%), Gaps = 25/304 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN--GDARDLEG 73 + +++ +LV+ Y++ I N + IEV A + +R +N G L G Sbjct: 41 FKQNQLTSRQLVEFYLKRIRRLNPLLRGVIEVNPDALFLADKADRERKVNTPGSTGGLHG 100 Query: 74 IPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 IPI +KD ATK ++T A S+ L G ++ V KL GA++LGK ++ E+A Sbjct: 101 IPILLKDNIATKDKLNTTAGSYALLGSVVPRDAGVVMKLRKAGAIILGKSSLSEWA---- 156 Query: 133 NETSYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 N + P RS + + TP GSS GS +VA L A S+GT+T GSI P+ Sbjct: 157 NFRTDGAPSGFCGRSGQGKNPYVLSATPCGSSSGSGISVAANLAAVSLGTETDGSIICPS 216 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN- 247 S+ VGIKPT G SR G+I P D G + RTV D+ +L AI G+D DA Sbjct: 217 SYNSVVGIKPTVGLTSRAGVIPITPRQDTVGPMCRTVSDAVYVLDAIVGFDSNDAATREA 276 Query: 248 ---LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDK------TWQQGISWLKDAGA 297 +P Y + L+ ++G +GI R + + DK T++ L+ GA Sbjct: 277 AKYIPNGGYRQFLNPLGLKGKRLGI---LRTLFYNSGNDKGSRRHQTFEHHFQTLRRQGA 333 Query: 298 KIVE 301 +V+ Sbjct: 334 VLVD 337 >gi|293607216|ref|ZP_06689557.1| allophanate hydrolase [Achromobacter piechaudii ATCC 43553] gi|292814308|gb|EFF73448.1| allophanate hydrolase [Achromobacter piechaudii ATCC 43553] Length = 619 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 109/426 (25%), Positives = 186/426 (43%), Gaps = 58/426 (13%) Query: 71 LEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P IKD G T AC + P ++TV Q+L GA+++GK N+D+FA Sbjct: 81 LYGVPFAIKDNIDAAGWPTTAACPEF--AYTPGEDATVVQRLRAAGAILIGKTNLDQFAT 138 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S +G V + + D + GS+ + +A F S+GTDT GS R PA Sbjct: 139 GLVGTRSPHGAVANTFNP-DYVSGGSSSGSASVVARGIAAF----SLGTDTAGSGRVPAG 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F VG+KPT G S G++ SLD I TV D+ ++ + GYDE D Sbjct: 194 FNNIVGLKPTRGWLSTAGVVPACRSLDCVSIFALTVADAELVAEVAGGYDERD------- 246 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTID--------KTWQQGISWLKDAGAKIVE 301 Y RA+ G + P+ RL + T++ ++ + LK+ GA++ Sbjct: 247 --PYSRAMP---AGAALPWPRAPRL-AVPATLEFFGDAQAAAVFEDAVRALKETGAQVEA 300 Query: 302 ISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEV 359 I P + A L +G + E + +++ + Sbjct: 301 IDFTPFNELA------------------------ALLYQGPWVAERFAAVQALWETNPDA 336 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 H ++ G ++ +A R + R +A G D ++ PT+P S + + + Sbjct: 337 IHPVVRGIVEQAANYSALDAFKAEYRRAELTRQIHQALA-GFDALVVPTSP-SIYTIAQL 394 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + ++ V+T N+A L A+++PA + +P G+ LIG +++ L G++ Sbjct: 395 QADPVTLNSRLG-VYTNFANLADLSALALPAGMRADGLPSGITLIGLAWQDRALARFGRL 453 Query: 480 IEKEAG 485 + + G Sbjct: 454 WQAQRG 459 >gi|257867387|ref|ZP_05647040.1| amidase [Enterococcus casseliflavus EC30] gi|257873718|ref|ZP_05653371.1| amidase [Enterococcus casseliflavus EC10] gi|257801443|gb|EEV30373.1| amidase [Enterococcus casseliflavus EC30] gi|257807882|gb|EEV36704.1| amidase [Enterococcus casseliflavus EC10] Length = 483 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 135/523 (25%), Positives = 223/523 (42%), Gaps = 95/523 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 ++LR IS E V + + N +NA + Q A E+ ++ + G G Sbjct: 9 EQLRQGKISFAERVAMIEEKVNQQNPLLNALVTFDPQAAIQHYEQHLQKTVFG------G 62 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 P+ +K TK G + + + R + +L + G V LG+ N EF + Sbjct: 63 QPMPLKILGQTKAGWPATSGAKLFAKARASRTAHFVSRLEEVGFVPLGQTNAPEFGFKNI 122 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S SSGG++AAVA + + +D GGSIR PASF+G Sbjct: 123 TDPTLYGPTRNPWNPAYSAGG-----SSGGAAAAVASGMFPIAGASDGGGSIRIPASFSG 177 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT G R + I+FA +T ++RD+ L A+ Sbjct: 178 LIGLKPTRGTMPVGPSEWRSWQGASINFA--------LTLSMRDTEQLFYAL----RTSQ 225 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGI----SWLKDAG 296 P E Q+ Q + + SPT + +T Q + ++L+ G Sbjct: 226 PTAPYQAPQVEWHHRQASQKPRLKV----AFTTASPTGGQVSETAIQAVRSAAAFLEKQG 281 Query: 297 AKIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVR-YGLRVEGKDILE--MYENTRS 352 ++VE+ P Q + YY ++ E ++ A D R +R E +++ +Y+ Sbjct: 282 HEVVEVGYPVDGQQMMTTYYAMNGGETAAMFAEIDAARQVPVRREEMELMTWALYQ---- 337 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +G+ ++ YVL+ + +D + E F D+ LTPTT Sbjct: 338 --YGK----KLPAADYVLALQWWDQ-----------LAEKMEEVFST-YDLFLTPTTAYP 379 Query: 413 AFPLGKEENNSGSM---------------GHIYNDVF---------TVAVNMAGLPAISV 448 A PL +E+ S S+ G + ++F T N+ G PAIS+ Sbjct: 380 A-PLIEEDLQSDSIRQRLHEIETLGKNAAGELIEEMFAKSYALTPYTQLANLTGQPAISL 438 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P AL E+++PLG+Q + RE+ LF VG + E + + P + Sbjct: 439 PTALSEERLPLGIQFMASKGREDLLFQVGYLFETQQRFLLPKQ 481 >gi|86749246|ref|YP_485742.1| amidase [Rhodopseudomonas palustris HaA2] gi|86572274|gb|ABD06831.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 471 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 207/476 (43%), Gaps = 56/476 (11%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPI 76 +K S E++D I + +NA ARAAA++S +R G+ + L+G+P+ Sbjct: 26 AKQFSPSEVIDDVIAQAQRWEPHLNALYAFDPDGARAAAKQSTERWHKGEPQGVLDGVPV 85 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IK+ ATKG+ + ++ +L + GA++ K M +F M SS +S Sbjct: 86 TIKENVATKGVPIPLGVPVTAPTPASVDAPPAARLREAGAILWTKTTMPDFGMLSSGLSS 145 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 ++G +PW + +T SS G+ AA A +GTD GGS+R PA++ G + Sbjct: 146 FHGVTRNPWDTTQNTGG-----SSSGAGAAGAAGYGPLHLGTDIGGSVRLPANWCGLFAL 200 Query: 197 KPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE- 254 KP+ GR + P + + AG +TRTV DSA+++ ++ D D +NLP D+ Sbjct: 201 KPSLGR-----VPIDPPYVGRCAGPMTRTVDDSALMMSVLSLPDARDG--MNLPPNDFAW 253 Query: 255 RALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L ++G T+G+ + L + + + GA + E+SL T+ + Sbjct: 254 HDLATDLRGKTIGLVTDLGFGMKLDDEVRRVVTDAARTFEAQGAIVREVSLGFTREMM-- 311 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY----- 368 DG+ R M+++ + Q + I + Sbjct: 312 ----------------DGLDNFWRA------RMWDDVSKLSEAQRAQVLPYIVRWAERGA 349 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---GKEENNSGS 425 LS + + +R + + F E +D +++P P +FP ++ Sbjct: 350 TLSGVEVMRGFNQTMAVRAMAAKLFAE-----IDYLISPVAPVVSFPAELPSPLDDPEIP 404 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 HI ++TV NM+ PA S+ P+G+Q++G+ F + + + + E Sbjct: 405 FDHI---LYTVPWNMSENPAASINGGYSSNGFPIGVQIVGRRFDDLGVLRMAKAFE 457 >gi|332662043|ref|YP_004444831.1| Amidase [Haliscomenobacter hydrossis DSM 1100] gi|332330857|gb|AEE47958.1| Amidase [Haliscomenobacter hydrossis DSM 1100] Length = 495 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 133/505 (26%), Positives = 221/505 (43%), Gaps = 73/505 (14%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA-AAEESDKRIINGDARDLE 72 + +R K+ SA EL+ + IQ E+ N Q+NA I + + A+A A ES ++G Sbjct: 17 ELVRKKEASAAELLQTAIQRAESVNPQINAIIHPLYESAKATVAAES----LSG---PFA 69 Query: 73 GIPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P +KD K + G+ +S QK+ G V++GK N EF + Sbjct: 70 GVPFLVKDLGLEMKDTPLRVGCKGYTGYTSSVDSYAIQKIKAAGLVIMGKTNTPEFGLTP 129 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 E +GP ++PW S SSGGS AAVA + + +D GGSIR PAS Sbjct: 130 YTEPELFGPTLNPWNLAHSPGG-----SSGGSGAAVAAGIVPMATASDGGGSIRIPASCC 184 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNL 248 G G+KPT GR S LG I + A + ++R+VRD+A L A+AG D ++ Sbjct: 185 GLFGLKPTRGRIS-LGPI-YGEMWSGAVVESCVSRSVRDTAAYLDALAGSLSGDPYQLSN 242 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS----WLKDAGAKIVEISL 304 P Y L Q + + + L +D+ + ++ L D G ++ E Sbjct: 243 PSAAYLAELGQHPGSLRIAFSTVHPLGL---PVDQACKDAVAKMAKQLSDLGHRVEE--- 296 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 ALP Y +L R+ + V G+ E+ + ++ + + + Sbjct: 297 -----ALPLPYF------KEDLLE----RFLVVVSGESAAELQQLSKHLQ-RRATTADVE 340 Query: 365 IGTYVLS--SRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 TY L+ R +++ + +A+K I + + F Q D++LTPT + +G +N Sbjct: 341 TNTYALALLGRTFNAGDFAQAKKGWNEIAQRVAQ-FHQQYDLLLTPTLASRPIKIGALQN 399 Query: 422 NS-------------------GSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKM 457 ++ S+G + + F T NM G P++++P E+ + Sbjct: 400 SAAEQTLLKFINSLNLGFMVKASIGQLADKAFGYIPWTPFANMTGQPSMNIPTLWTEENL 459 Query: 458 PLGLQLIGQPFREETLFSVGQIIEK 482 P+G RE+ L + +E+ Sbjct: 460 PVGTMFTALQGREDLLLRLAAQLEQ 484 >gi|86748802|ref|YP_485298.1| amidase [Rhodopseudomonas palustris HaA2] gi|86571830|gb|ABD06387.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 500 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 141/517 (27%), Positives = 220/517 (42%), Gaps = 67/517 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+ +F +E L++K +S+VEL I IE + Q+NA +A A +D Sbjct: 14 SQWSFATATELSAALKAKKVSSVELTQDAIARIERHDGQINAICVRDFDRALQTARAADL 73 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE------STVTQKLWDNG 115 + G L GIP+ +K+ F G+ T GF PH + + +++ G Sbjct: 74 ALSRGGRGSLLGIPMTVKESFNVAGLPTTW------GFVPHKDFVAQDDALAIERVKAAG 127 Query: 116 AVMLGKLNMDEFAMGSSNETS-YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 V+LGK N+ A+G T+ YG +P+ TPGGSSGGSSAA+A A Sbjct: 128 GVILGKTNV-PVALGDWQSTNEIYGTTNNPFDL-----GRTPGGSSGGSSAALAAGYGAL 181 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-------SLDQAGIITRTVRD 227 S+G+D GGS+R PA + G KPT+G C G L G + R+ D Sbjct: 182 SLGSDIGGSLRVPAHYCGVYAHKPTFGLCPARGHTPPPLPPLPSNRDLSVIGPMARSATD 241 Query: 228 SAILLKAIAGYDEC-DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 A+LL+ +AG D D L +P A +++ V + + L ++ Sbjct: 242 LALLLEVMAGPDPLFDGIGYKLDLPAPRHA---ALKDFRVLLLDSHPLLPTGASVRGAIA 298 Query: 287 QGISWLKDAGAKIVEIS--LPHTQYALPAYY-----IISPAEASSNLARYDGVRYGLRVE 339 S L AG ++ + LP Y ++ LA G GL + Sbjct: 299 ALESGLTKAGVRVTRTTPLLPDLAETSRVYMRMLLSFLAAGFPPEILAEVQGAVTGL--D 356 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 D E R + VLS R ++ A RT ++ + E F+Q Sbjct: 357 AADDSLPAERLRGM---------------VLSHR----DWVIADGRRTGLRAQWHELFKQ 397 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHI------YND--VFTVAVNMAGLPAISVPAA 451 D ++ P PT A+P E I Y D V+ + GLPA ++P A Sbjct: 398 -FDAVICPLMPTPAYPHDHHEPQEERRIQIDGKPYPYVDQLVWPGIATLPGLPATALPIA 456 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + + +P+G+Q++G + T + ++IE+E G F+ Sbjct: 457 MSAEGLPIGVQIVGPWLEDRTPLKLAELIEREFGGFK 493 >gi|118592767|ref|ZP_01550156.1| amidase [Stappia aggregata IAM 12614] gi|118434537|gb|EAV41189.1| amidase [Stappia aggregata IAM 12614] Length = 495 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 118/485 (24%), Positives = 203/485 (41%), Gaps = 44/485 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + V E K +S + + + + +E ++ A + ++A AEE+ +R + G Sbjct: 39 LGVRELLKAFSGKTVSPSDYMAAVCERVEACEPKVGALYDYRPEQAMKQAEEATQRWLKG 98 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L+G+P+ +K+ ATKG + + ++ +L ++GA++ K Sbjct: 99 APNGALDGVPVTLKELIATKGDPVPMGTAATELVPADADAPTAARLKEDGAIIFAKTTCP 158 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 ++ M SS ++++ +PW ST+ +G + AA G L IGTD GGS+R Sbjct: 159 DYGMLSSGLSTFHQLSRNPWDL--STNPGGSSAGAGSAGAAGYGPL---HIGTDIGGSVR 213 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA +TG G KPT GR + + P G +TRTV DS +++ I D DAT Sbjct: 214 LPAGWTGLFGFKPTQGRVP---VYPYYPG-RCVGPMTRTVDDSLMVMPVITRSDWRDATS 269 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISL 304 V DY+ A +++GM +G+ + + P + ++ GA IV+ Sbjct: 270 VPYEALDYDVA-PANVKGMKIGLILDAGTGLKVDPEVRDAVLAAARMFEEQGADIVD--- 325 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + P NL DG+ R + R + E + +I+ Sbjct: 326 ------------LGPLLTRENL---DGLDTFWRA------RFWSQMRKL--SDEARGKIL 362 Query: 365 IGTYVLS----SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 Y+L + D + A L R + GV IL+P P +FP Sbjct: 363 --PYILDWASVAAKIDGASVAAGFDHMLAMRQSCASALNGVGAILSPVNPIVSFPAEWPA 420 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + FT+ NM PA S+ + MP+GLQ++ F + T+ + + Sbjct: 421 PTNDPALPFEHICFTMPWNMGDQPACSINCGFSKSGMPIGLQIVAPRFEDLTVLRLAKAF 480 Query: 481 EKEAG 485 E+ G Sbjct: 481 EEWRG 485 >gi|238879069|gb|EEQ42707.1| urea amidolyase [Candida albicans WO-1] Length = 1813 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 118/438 (26%), Positives = 192/438 (43%), Gaps = 45/438 (10%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 A IE + + + +S+KR + L G+PI +KD K T A + P Sbjct: 47 ASIENLEHQWKFLQSKSNKRDL-----PLYGVPIAVKDNIDAKTFETTAACPSF-AYSPS 100 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 ++T + L D GA+++GK N+D+FA G S YG I+P K+ GGSS G Sbjct: 101 KDATTVRLLRDAGAIVIGKTNLDQFATGLVGTRSPYG--ITP---NTFNPKYVSGGSSAG 155 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S++ VA + ++GTDT GS R PA+ +G+KPT G S G++ SLD I Sbjct: 156 SASVVARGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGVFSCSGVVPACKSLDCVSIFA 215 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 ++D+ + +A DE D ++P + L + + V +P L Y Sbjct: 216 LNLQDAQLTFNIMAEEDEHDEFSRSMP----KNPLLKFGKKPRVVVPTNL-LWYGEKENP 270 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLR-VE 339 K +Q+ ++ + G ++V + + E LAR Y+G R V Sbjct: 271 KLYQEAVAKFEKIGCELVSLDI----------------EPLLELARCLYEGPWVAERYVA 314 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 KD NT V I G + ++ C+ Y R + ++KR + Sbjct: 315 VKDFFAT--NTPEKDLDPTVTKIIKGGEHYSAATCFQYEYKR----QGIVKR--VNKLLE 366 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 G+D I+ PT P + P +E N + +T VN+A + A+++PA +P Sbjct: 367 GIDAIIVPTAPLN--PTIEEVTNEPIKVNSCQGTYTNFVNLADMSALAIPAGFRNDGLPF 424 Query: 460 GLQLIGQPFREETLFSVG 477 G+ L+ F + L + Sbjct: 425 GVTLLSHKFNDYALLDLA 442 >gi|332292575|ref|YP_004431184.1| Amidase [Krokinobacter diaphorus 4H-3-7-5] gi|332170661|gb|AEE19916.1| Amidase [Krokinobacter diaphorus 4H-3-7-5] Length = 560 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 136/488 (27%), Positives = 222/488 (45%), Gaps = 68/488 (13%) Query: 17 RSKDISAVELVDSYIQAI----ENSNSQMNAYIEV---VAQKARAAAEESDKRIINGDAR 69 ++ D S EL Y+ I +++ +N I + Q+ARA + DK I D Sbjct: 104 KNGDFSYEELTLFYLNRIARFESDNDLALNGVISLNKEAVQEARAL-DNKDKSTI--DEY 160 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA- 128 + G+PI +KD G+ T A S L ++ +T++L + A++LGK N+ E+A Sbjct: 161 SVYGMPILLKDNIGAAGMITTAGSVALANNNAG-DAFITKRLKEENAIILGKANLSEWAY 219 Query: 129 -MGSSNETSYY---GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + + Y G I+P+ + +F GGSS GS +VA A+IG++T GSI Sbjct: 220 FLCTGCPVGYSAVGGQTINPYGRL----QFESGGSSSGSGVSVAANYAVAAIGSETSGSI 275 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P+S VG+KPT G SR GI+ + LD G +T+ V D+AILL+A+ G D D+ Sbjct: 276 LSPSSQNNLVGLKPTIGLLSRSGIVPISSHLDTPGPMTKNVVDNAILLQALTGKDAADSY 335 Query: 245 CVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 DY A+ S++G +G+ K Y D T+ I+ LK+ A +VE+ Sbjct: 336 SYT-SSDDYVSAVKNGSLEGKYLGVIKGYLQD-------STYAAAINKLKETKATLVEVD 387 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG-QEVKHR 362 + +P + I + ++L Y V+ ++I E+ I F Q+ R Sbjct: 388 MERVN--MPGFLSILNIDMKNDLPAYYDAEVAPSVKNRNIEEL------ITFNNQDSLTR 439 Query: 363 IMIGTYVLSSRCYDSHY---LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 I G + DS L+A K + + T+A+ Q L K Sbjct: 440 IPYGQQLFKGIVADSTTAVELKAIKENLM---EVTQAYFQDA--------------LSKH 482 Query: 420 ENNSGSMGHI-----YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR-EETL 473 G + I Y+ + A A PA+++P + P G+ +I PF+ EE + Sbjct: 483 PEADGQLDAILSINNYDAGYAAA---AHYPALTIPMGFTAQGEPKGITII-TPFKQEEVI 538 Query: 474 FSVGQIIE 481 +++ +E Sbjct: 539 YNIAVGVE 546 >gi|41406679|ref|NP_959515.1| hypothetical protein MAP0581c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395029|gb|AAS02898.1| hypothetical protein MAP_0581c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 498 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 134/514 (26%), Positives = 217/514 (42%), Gaps = 86/514 (16%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K ++ EL+ Q + N ++NA +V + A ++ ++G G+P + Sbjct: 21 KQVTPAELLALARQRADAVNPRLNA---IVCRLDDVADRQAADPNLSGP---FAGVPFLL 74 Query: 79 KDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD +G T S L + VTQ+ D G V+ GK N EF + E Y Sbjct: 75 KDLGQEYRGFPTSCGSRSLANDVADRHALVTQRFLDAGLVIFGKTNTPEFGAKGATEPDY 134 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +GP +PW + + TPGGSSGGS AAVA + A+ D GGSIR PA+ G VG+K Sbjct: 135 WGPARNPWDT-----ERTPGGSSGGSGAAVAAGIVPAAGANDGGGSIRIPAACNGLVGLK 189 Query: 198 PTYGRCSRLGIISFAPS-------LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 P+ G+ + P + G++TRTVRDSA LL AI G+ + V LP Sbjct: 190 PSR------GLAPYGPQTGELMLGMATQGVVTRTVRDSAALLDAIIGHHPDASYRVALPD 243 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK----TWQQGISWLKDAGAKIVEISLPH 306 + + + +T+G L+P D+ + + L + G ++ E++ P+ Sbjct: 244 KPFAEQITRPPGPLTIGYSAR---SALNPRPDREAVVAVENSAALLSELGHRVREVAPPY 300 Query: 307 TQYALPAYYII----SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 AL ++ + +++ R G R E D L + E RS G Sbjct: 301 DDAALGRDFLTIWFAQLHQQVADIRRRTGARDN-DFEA-DTLAISELGRSGGV------- 351 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 V+S+ + Y+++ AF +G D LTPT T +G + Sbjct: 352 ----LPVMSALENRNTYIQS-----------LAAFHEGYDFFLTPTLATPPLVVGATSTS 396 Query: 423 SG-----------------SMGHIYNDV---------FTVAVNMAGLPAISVPAALCEKK 456 + + I +D+ +T N+ G PAISVP + Sbjct: 397 AALQRAARLVSRVRGGKLMRLSGILDDLIRESLGWVPYTQLANLTGRPAISVPLHWTDDG 456 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 +PLG+Q +G+ + L + +E+ + + H Sbjct: 457 LPLGVQFVGKLGADGDLLQLAAQLEQARPWAQRH 490 >gi|154251254|ref|YP_001412078.1| amidase [Parvibaculum lavamentivorans DS-1] gi|154155204|gb|ABS62421.1| Amidase [Parvibaculum lavamentivorans DS-1] Length = 485 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 131/511 (25%), Positives = 222/511 (43%), Gaps = 44/511 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+F + S+ +R +++S+ EL D +I +E + ++NA + + A AA+ +D Sbjct: 1 MTELHFRSASDLGRMIRRREVSSAELTDHFIARVEKLDPKINAVVARDFEGAHKAADAAD 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + + G+ + L G+P IKD + G+ + + + P +T +L GA++ Sbjct: 61 EALARGEIQGPLHGLPFTIKDAYEVAGLTSTGGAPVWKDHVPATSATAIGRLQRAGAIVF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+ + YG +PW ++D SSGGS+A++A AA G+D Sbjct: 121 GKTNVPYLSGDLQTYNDIYGTTNNPW-ALDCGPGG----SSGGSAASLAAGFTAAEFGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP------SLDQAGIITRTVRDSAILLK 233 GGSIR PA G G KPT+ + G +S P L AG + R+ D +LL Sbjct: 176 IGGSIRTPAHLCGVFGHKPTFDIVPKRGHLSPPPGALSEGDLSVAGPLARSAEDLQLLLD 235 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 AG D DA L +P + ++ + V I E+ IDK + L Sbjct: 236 IAAGPDWADAIGWKLDLPQARAKTPKELR-VAVWIEDEFC------DIDK---ESAELLT 285 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 +A + + A P + + EA L + + G+ + I + + + Sbjct: 286 NAANALADAGANVDWQARPDFTLADITEAYLILL-HSQIGAGMP---QSIRDHWSELKKS 341 Query: 354 GFGQEVKHRIMI---GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 + HR + GT L+ R ++ + ++ + + F Q DV+L P Sbjct: 342 FKADDKSHRALQAIGGTLSLAERAV------WKEKQAQLRWRWHQFF-QKYDVVLAPVLM 394 Query: 411 TSAFPLGKEEN------NSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQ 462 AF E N + + Y DV A ++ LPA P + + P+G+Q Sbjct: 395 RPAFEHNHETNWHKRELDVNGVMRPYMDVLIWAGPAVVSYLPASVAPVGITSEGKPVGIQ 454 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 +IG + T +V + E+ G F+P K W Sbjct: 455 IIGPHLEDRTTIAVAGMFEEILGGFKPPKGW 485 >gi|15209172|gb|AAK91890.1|AC091627_3 Amidase family protein [Solanum demissum] Length = 507 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 26/309 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR--DLEG 73 + +++ +LV+ Y+ I+ SN + IEV A + +R N L G Sbjct: 39 FKQNKLTSRQLVEFYLNEIQRSNPILKGTIEVNPDALILADKADQERKSNASKSLSRLHG 98 Query: 74 IPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 IP+ +KD ATK ++T A S L G ++ V +KL + GA++LGK M E+A + Sbjct: 99 IPVLVKDNIATKDKLNTTAGSLALVGSIVPQDAGVVKKLRNVGAIILGKATMTEWAASRA 158 Query: 133 NE-------TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 G + P+ + S D P GSS GS+ +VA + A ++GT+T GSI Sbjct: 159 KNLLMPNGWNGRLGQALDPY--VASAD---PSGSSTGSATSVAANMVAVALGTETAGSIL 213 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--- 242 P+S VGIKPT G SR G+I + D G I RTV D+ +L I G+D D Sbjct: 214 SPSSANSVVGIKPTVGLTSRAGVIPISHRQDTVGPICRTVTDAVEVLDVIVGFDRDDFPA 273 Query: 243 --ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + +P Y + L ++ +GI K D+ KT+QQ + L+ GA + Sbjct: 274 TKKASIYIPHGGYRQFLKADGLRYKRLGISK----DFFGSNDIKTYQQHFNTLRQKGAVL 329 Query: 300 VE-ISLPHT 307 V+ + +P T Sbjct: 330 VDNLVIPST 338 >gi|315643990|ref|ZP_07897160.1| Amidase [Paenibacillus vortex V453] gi|315280365|gb|EFU43654.1| Amidase [Paenibacillus vortex V453] Length = 525 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 202/469 (43%), Gaps = 37/469 (7%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFA 83 E+V +Y+ I S NA+ ++ A A E D+R G+ L G+PI IK+ Sbjct: 57 EIVKAYLDRINIYESNYNAFT-MMNVNALQEAREIDRRRTAGEKLGPLAGVPIVIKEAVD 115 Query: 84 TKGIHTQ----ACSHILDGFR--PHYESTVTQKLWDNGAVMLGKLNMDEFAM-GSSNETS 136 G + S L G P ++ V +L GA++LGK N+ F+ G+ +S Sbjct: 116 VAGFPSTFGWAPLSKELGGIELIPEKDAPVVARLKAAGAIILGKTNIPAFSSDGTRASSS 175 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 + G + ++D K PG SS G++ +++G I +TGGSI+ PA+ VGI Sbjct: 176 WAG---DTYNAVDR--KLVPGASSSGTAMSISGNFAVLGIAEETGGSIQNPAAAQALVGI 230 Query: 197 KPTYGRCSRLGIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPVP 251 KPT+G G++ A S D G RTV D+A++L IAGY DA V N+P Sbjct: 231 KPTFGLVPNAGVVPLAGSTRDVVGPHARTVHDAAVMLDVIAGYTAEDAKTVASIGNIPRK 290 Query: 252 DYERALDQ-SIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 Y L+ +++ +G+ L + L+ + + + + L+ GA +V T++ Sbjct: 291 GYTSKLNSLALKNKRIGLYGPGWLGEELTAETQQLYDRAVKELESQGAIVVTDPFADTEF 350 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A + S YD +Y R+ I ++E + G E + Sbjct: 351 ---AEFAKSAGSIGIESIVYDMEQYLKRLGPNAAIKSVHELIKKTG---ETPSALAKYEE 404 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG-VDVILTPTTPTSAFPLGKEENNSGSMG 427 L + + + RT F +Q +D ++ P PL E+ Sbjct: 405 ALKNPDAIPDLSKFTEARTKYLHIFNGVMDQHRLDALVFPQMYKET-PLLHSEDKIA--- 460 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 D +N+AG+P ++VPA + P + +G+ + E L + Sbjct: 461 ----DTTVPEINIAGVPLVTVPAGYYKSGSPFAIAFVGKMWSEADLLGM 505 >gi|116249742|ref|YP_765580.1| putative urea amidolyase [Rhizobium leguminosarum bv. viciae 3841] gi|115254390|emb|CAK04023.1| putative urea amidolyase [Rhizobium leguminosarum bv. viciae 3841] Length = 601 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 123/423 (29%), Positives = 186/423 (43%), Gaps = 52/423 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD G+ T A + +RP ++TV +L GA+++GK N+D+FA G Sbjct: 69 LWGVPFAVKDNIDAAGLPTTAACPAYE-YRPEADATVVARLKAAGAIIIGKTNLDQFATG 127 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S YG +P D+ + GGSS GS+ VA L A ++GTDT GS R PA+F Sbjct: 128 LNGTRSPYG---APRSVFDAA--YISGGSSSGSAVTVASGLAAFALGTDTAGSGRVPAAF 182 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC----- 245 VGIKPT G G I S+D I TV D + K G+D DA Sbjct: 183 NNLVGIKPTPGLLPNTGAIPACKSVDCITIFAATVGDGVAIRKVAEGFDTADAFSRRAKP 242 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 NLPV G+ G +E+ D ++ + Q I K GA IV Sbjct: 243 ANLPVSGLR-------IGVLTGAEREFFGDK---EVEALYDQAIERAKALGATIVPFDYA 292 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + EA++ L Y+G R+ +E + + F V+ I Sbjct: 293 PFR------------EAAALL--YEGPWVAERLAA---VETFLAANAADFDPTVRGIIEG 335 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS---AFPLGKEENN 422 + ++ Y ++ L ++ TEA + DV+L PT PT+ A L Sbjct: 336 AKGKTAVEAFNGRY----RLEELRRK--TEAEWEKADVLLLPTAPTTYTVADMLANPVVL 389 Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +G +G +T VN+ AI+VPA + +P G+ +I F ++ L + + + Sbjct: 390 NGRLGR-----YTNFVNLLDCAAIAVPAGFGKGGLPGGVTVIAPAFTDDALAPLADALHR 444 Query: 483 EAG 485 AG Sbjct: 445 AAG 447 >gi|110632704|ref|YP_672912.1| amidase [Mesorhizobium sp. BNC1] gi|110283688|gb|ABG61747.1| Amidase [Chelativorans sp. BNC1] Length = 450 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/489 (29%), Positives = 218/489 (44%), Gaps = 71/489 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E + E+ R+ +S+ ELV + ++ I+ ++ A+ + KA AE+ D+ Sbjct: 9 AEPTALGAREAAWRIAEGALSSAELVTACLERIDAEEERVQAWAFLDRGKALREAEDRDR 68 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R G L G+P+GIKD +G+ T S I G P +ST+ ++L GAV+LG Sbjct: 69 RRRLGQPLGALHGVPVGIKDIIDVRGMPTGNGSPIDAGRMPFEDSTLVRRLRAAGAVILG 128 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTD 179 K EFA YY P ++ + D TPGGSS GS+AAVA + +IG+ Sbjct: 129 KTVTTEFA--------YY----QPGKTRNPHDPARTPGGSSSGSAAAVAAGMVPLAIGSQ 176 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ +PASF G VG+KP++G R G++ APSLD G+ R++ D+A + + G D Sbjct: 177 TNGSVIRPASFCGVVGLKPSFGAIPRTGVLRLAPSLDHMGVFARSLEDAA-FAEILMGAD 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D P P AL P L ++ W++ K A ++ Sbjct: 236 GRDPDARESPGPLSATALSDP--------PVTPALAFVR---TPAWERAEEPTKAAFTEL 284 Query: 300 VE--------ISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 VE + L H A + + AE + NL G VE L E Sbjct: 285 VEALGSGIDQVDLSEHFAGAFGWHQTVMSAEMARNL--------GHHVEHMPDL-CSEKL 335 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 R+I V R + YL AR + +++ T FE+ D I+TP Sbjct: 336 RAI---------------VAEGRAIAAPDYLAARDMAPVLRETLTPIFER-FDAIITPAA 379 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P A P+G+ + VF GLP++S+P +P+G+QL+G P + Sbjct: 380 PGEA-PVGEATGDP---------VFCTLWTFCGLPSLSLPLLNGPNGLPVGVQLVGAPGQ 429 Query: 470 EETLFSVGQ 478 + L + Sbjct: 430 DARLLRTAR 438 >gi|192289986|ref|YP_001990591.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1] gi|192283735|gb|ACF00116.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1] Length = 607 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 118/434 (27%), Positives = 185/434 (42%), Gaps = 61/434 (14%) Query: 67 DARDLEGIPIGIKD-----CFATKGIHTQACSHILDGF--RPHYESTVTQKLWDNGAVML 119 D + L GIP +KD C T T AC GF P + Q+L D GAV++ Sbjct: 67 DTKPLWGIPFAVKDNIDVACLPT----TAACP----GFASTPSETAFAVQRLLDAGAVLI 118 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N+D+FA G + Y PV P ++D ++ PGGSS GS+ AVA L ++GTD Sbjct: 119 GKTNLDQFATGLVGVRTPY-PV--PRNAIDP--RYVPGGSSSGSAVAVAHGLVTFALGTD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS R PA+ VG+KP+ G S G++ +LD + TV D+ + + +A +D Sbjct: 174 TAGSGRVPAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFD 233 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIP----KEYRLDYLSPTIDKTWQQGISWLKDA 295 D P G+ VG+P +++ D S ++ + A Sbjct: 234 GVDPWSRPHPA--AAANPPALPPGLRVGVPDTVSRKFAGDLQSERAFDLAVADLATVVPA 291 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS-IG 354 A+ V++S P + + L G + E Y+ R I Sbjct: 292 PARAVDLS--------PLFEVAD-----------------LLYSGPWVAERYQAIRQVIE 326 Query: 355 FGQEVKH---RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 E+ H R +IG S+ + + R R +A G+DV++ PT P Sbjct: 327 TAPELLHPVTRKIIG----SATAFSAADAFGGLYRLAELRRAADAIWSGIDVLIVPTYPR 382 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E + G + +T VN+ L A++VP+ P G+ LI R++ Sbjct: 383 PRMVAELEADPIGPNSEL--GTYTNFVNLLDLCALAVPSRFRADGFPSGVTLIAPAGRDD 440 Query: 472 TLFSVGQIIEKEAG 485 L ++G+ + +G Sbjct: 441 LLAALGERLHAASG 454 >gi|186474248|ref|YP_001861590.1| amidase [Burkholderia phymatum STM815] gi|184196580|gb|ACC74544.1| Amidase [Burkholderia phymatum STM815] Length = 508 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 131/479 (27%), Positives = 226/479 (47%), Gaps = 39/479 (8%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-AR 69 E R + +K+IS VEL+D+ I+ IE +N +NA AR AA+ +++++++G+ Sbjct: 14 ELRRMIGAKEISPVELLDACIERIEAANPAVNAITATCYDAARKAAKAAERKVLDGEPLG 73 Query: 70 DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+G+KD T G+ T S + G P + + ++L GA+++GK N+ E Sbjct: 74 LLHGLPLGVKDLEDTAGLLTTYGSPMSRGHVPSRDVVLVERLRAAGAILVGKTNVPELGA 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ +G P+ + GGSSGGS+AA+A + G+DTGGS+R PAS Sbjct: 134 GANTRNPVWGATGDPFDP-----ELNAGGSSGGSAAALACDMLPVCTGSDTGGSLRIPAS 188 Query: 190 FTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG +P+ G + ++ + P + G + R V ++A+ L A AG D ++ Sbjct: 189 KCGVVGFRPSPGLVPNSRRLLGWTP-ISVVGPMGRDVDETALQLAATAGLSTRDPLSYDV 247 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + + + VG +++ + I ++ ++ L P Sbjct: 248 DAPGFATLPAFDLSTLRVGYTEDFGCCDVDDDIRALFRARMAALA-----------PLVH 296 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 P + + A ++ R + GL +D + NTR+ E+ + + Sbjct: 297 TCEPVAFDLGDAHRCFDVIRAESFVAGLCDAYARDPGALGPNTRA---NYEMGAAMTLA- 352 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LGKEENNSG 424 DS + +A + R I R F AFE+ DVIL+PTTP S FP L + + Sbjct: 353 --------DSAWAQAEQTR--IFRRFQSAFER-CDVILSPTTPVSPFPWRELYAAQIDGR 401 Query: 425 SMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + Y + T V + PA+S+P + MP GLQ++G + +V + +EK Sbjct: 402 AQENYYRWLALTYVVTLTTHPALSLPCGVDRAGMPFGLQIVGPFHGDLKTLAVARAMEK 460 >gi|296166512|ref|ZP_06848943.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898124|gb|EFG77699.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 494 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 146/510 (28%), Positives = 220/510 (43%), Gaps = 86/510 (16%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIG 77 K ++ EL+ Q + N ++NA + R E +D+R + D + G+P Sbjct: 21 KQVTPPELLALARQRADAVNPRLNAIV-------RPLGELADRRAADPDLSGPFTGVPFL 73 Query: 78 IKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD A +G T + S L + VTQ+ D G V+ G N EF E+ Sbjct: 74 IKDLAQAYRGFPTASGSRSLANDVADRHALVTQRFLDAGLVIFGMTNTPEFGAKGITESD 133 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 Y+GP +PW + TPGGSSGGS AAVA + A+ D GGSIR PA+ G VG+ Sbjct: 134 YWGPARNPWNT-----GHTPGGSSGGSGAAVAAGIVPAAGANDGGGSIRIPAACNGLVGL 188 Query: 197 KPTYGRCSRLGIISFAPSLDQA--GIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 K + G S G + P G+++RTVRDSA L AI D A V LP + Sbjct: 189 KLSRG-LSPYGPQTGEPMFGMVTQGVVSRTVRDSAALCDAIIARDPHAAYEVALPRGTFA 247 Query: 255 RALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGIS----WLKDAGAKIVEISLP 305 + + P E R+ Y ++P D+ + L D G ++ E+ P Sbjct: 248 EHITRR--------PGELRIGYSWSSAINPHPDREAVAAVERAVALLGDLGHRVEEVPPP 299 Query: 306 HTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEG--KDILEMYENTRSIGFGQEVKHR 362 + AL ++ I A+ ++A R G R D L + E RS G Sbjct: 300 YDDDALARDFLTIWFAQLYQHVADARQ-RTGARDRDFEADTLAVSELARSAG-------- 350 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-------- 414 ++ + L +R ++H IR+L +F Q D +LTPT T Sbjct: 351 VLAPIFALENR--NNH------IRSL------ASFHQTFDCLLTPTLATPPLRVGATATP 396 Query: 415 -PL------------GKEENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKK 456 PL GK SG + + + +T N+ G PAISVP ++ Sbjct: 397 RPLQRVARFASRLRAGKVMALSGVLDQLIQESLGWVPYTQLANITGRPAISVPLHWTDRG 456 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +PLG+QL+G+ + L + +E+ + + Sbjct: 457 LPLGVQLVGRLGADGDLLQLAAQLEEASPW 486 >gi|70732493|ref|YP_262256.1| amidase [Pseudomonas fluorescens Pf-5] gi|68346792|gb|AAY94398.1| amidase family protein [Pseudomonas fluorescens Pf-5] Length = 487 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 128/503 (25%), Positives = 224/503 (44%), Gaps = 50/503 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + E +R+R + +S E++ +Y+ IE+ N +NA + + Q A A E+D+ Sbjct: 7 SELVLLQAHELAERIRLRQVSCREVMQTYLAHIEHYNPLVNALVSL--QPAEALLAEADR 64 Query: 62 R---IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 R + G+ R + G+P IKD T+GI T S + F P + + +++ GA+ Sbjct: 65 RDAELARGEYRGWMHGLPHAIKDLSLTQGIRTTLGSPLYRDFIPERDGIMVERIKAAGAI 124 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK N EF +GS +G + D + T GGSSGG++AA+A L + G Sbjct: 125 LIGKSNTPEFGLGSQTYNPLFGATGC---AYDPSK--TAGGSSGGAAAALALHLVPVADG 179 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRC-----SRLGIISFAPSLDQAGIITRTVRDSAILL 232 +D GS+R PA+F G +P+ GR S L F L G + R+VRD+A+LL Sbjct: 180 SDMMGSLRNPAAFNNIFGFRPSQGRVPFDDSSDL----FIDQLGYEGPMARSVRDAALLL 235 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 AG D + + L++ +G +G ++ YL + Sbjct: 236 SVQAGGDARAPLSIAESGQGFAAPLERDFKGTRLGWLGDFN-GYLP-------------M 281 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNL-ARYDGVRYGLRVEGKDILEMYENTR 351 + ++ E +L + + SP A L + + +R+ + V G + + Sbjct: 282 EKGLLELCEKALGDFRSLGCSVEPASPDFAPERLWSSWRTLRHWM-VAGSLGSTYADPQK 340 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 E + G + +S+ +++ +R+ R + K FE+ D +L P+ Sbjct: 341 RTQLKDEAIWEVENGLKLPASQVFEASVIRSDWYRAISK-----LFER-FDYLLLPS--A 392 Query: 412 SAFPLGKE----ENNSGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIG 465 FP K N G Y+ V + ++G P SV A +P+GLQ+IG Sbjct: 393 QVFPFDKNIPWPRNIEGVAMDTYHRWMEVVIPGTLSGCPVASVQAGFNANGLPMGLQIIG 452 Query: 466 QPFREETLFSVGQIIEKEAGYFR 488 + + + + E+ + +F+ Sbjct: 453 KHQADFAVLQLAHAYEQASRWFQ 475 >gi|195390576|ref|XP_002053944.1| GJ24159 [Drosophila virilis] gi|194152030|gb|EDW67464.1| GJ24159 [Drosophila virilis] Length = 530 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 129/505 (25%), Positives = 219/505 (43%), Gaps = 45/505 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++ E R RLRS+ +++VELV +YI+ I+ N+ +NA +E A A +D+ I Sbjct: 45 LLLLSIQELRTRLRSRQLTSVELVGAYIERIKVVNTLLNAVVESRFDAALLEAASADQLI 104 Query: 64 I--NGDA------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 GDA + L G+P+ +K+ A G+ S R + V ++ G Sbjct: 105 AAAGGDADQLFAKQPLLGLPVTVKESCALSGMSFAVGSLARSERRADQDGVVVARIRAAG 164 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A+ L E+ + +T G +P+ + TPGGSSGG A Sbjct: 165 AIPLLVSATPEYCYSTDTDTLLNGRCRNPF-----DFERTPGGSSGGEGALNGAGASLFG 219 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-----QAGIITRTVRDSAI 230 IG+D GGSIR P+ F G G KPT G S G + D G +TR D A Sbjct: 220 IGSDIGGSIRIPSLFCGIFGHKPTGGVVSVTGHFPNSSDADFQQYLVLGPMTRFAVDLAQ 279 Query: 231 LLKAIAGYDECDATCVN--LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 LL+ +AG + ++ LP+ + +G+ G+ + +++ Q Sbjct: 280 LLELMAGAEAAAQLRLHELLPLRQLQVHYALGFEGLNGGMHQ---------AVEEDIQTA 330 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MY 347 I + A + + LP Q A A + S A S +AR + + L E + + + Sbjct: 331 I---RKAVVHLQTLGLP-VQRARLAGFGDSLEIALSGIARLGQMPFVLDWERSQVWQTVM 386 Query: 348 ENTRSI-GFGQEVKHRIMIGTYVLSSRCYDSHYLRA--RKIRTLIKRDFTEAFEQGVDVI 404 + RS+ G + + ++ ++ S L + R+ +TL + TE V+ Sbjct: 387 QLLRSLCGKSRHTTNALIFDLMRRTNAFMPSQRLESYRREAQTLAGQ-LTELLGT-TGVL 444 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 L PT A + + ++ +T+ N+ GLPA VP L + +P+G +I Sbjct: 445 LFPTMHAPA------TRHGWTPLQLWGVDYTLLFNILGLPATHVPMGLNGQGLPIGFSVI 498 Query: 465 GQPFREETLFSVGQIIEKEAGYFRP 489 P+++ V +E+ G ++P Sbjct: 499 AAPYQDRLCLRVAVELERAFGGWQP 523 >gi|109130979|ref|XP_001095907.1| PREDICTED: fatty-acid amide hydrolase 2 [Macaca mulatta] Length = 532 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/497 (23%), Positives = 202/497 (40%), Gaps = 59/497 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R + + +++V +YI I++ N +N ++ ++A A D+++ D LE Sbjct: 60 IRQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLEN 119 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +K+ F +G+ + ++TV L + GA+ LG N E Sbjct: 120 KWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAISKTDATVVALLKEAGAIPLGITNCSEL 179 Query: 128 AMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG RS + D + GGSSGG +A +G+D GGSIR Sbjct: 180 CMWYESSNKIYG------RSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRM 233 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KP+ G G A G + R D A +LK +AG Sbjct: 234 PAFFNGIFGHKPSPGVVPNKGQFPMAVGGQELFQCTGPMCRYAEDLAPMLKVMAG----- 288 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLD-----YLSPTIDK----TWQQGISWL 292 P +R LD + + K Y ++ +L +D+ ++ + L Sbjct: 289 --------PGIKRLKLDTKVHLKDL---KFYWMEHDGGSFLMSKVDQDLILAQKKVVVHL 337 Query: 293 KD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + + L +Y+ + + A+ V L GK + ++E + Sbjct: 338 ETILGASVQHVKLKKMKYSFQLWITMMSAKGHDGKEPLKFVDL-LGDHGKHVNPLWELIK 396 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCY--DSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPT 408 G V IG +L + + Y + + + ++++ E G D V L P+ Sbjct: 397 WC-LGLSVYTIPSIGLALLEEKLKYNNEKYQKFKAVEESLRKELVEML--GDDGVFLYPS 453 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT A + + +N +T N GLP P L K +PLG+Q++ PF Sbjct: 454 HPTVA------PKHHVPLTRPFNFAYTGVFNALGLPVTQCPLGLNVKGLPLGIQVVAGPF 507 Query: 469 REETLFSVGQIIEKEAG 485 + +V Q +EK G Sbjct: 508 NDHLTLAVAQYLEKTFG 524 >gi|226497512|ref|NP_001145607.1| hypothetical protein LOC100279085 [Zea mays] gi|195658741|gb|ACG48838.1| hypothetical protein [Zea mays] Length = 589 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 198/457 (43%), Gaps = 66/457 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + +R+K I++ EL D +++ ++ N + A I A A+E+D Sbjct: 142 DIAFMSVIELGELIRTKQITSRELTDIFLRRLKRYNPVLEAVITYTEDLAYKQAKEADDL 201 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A T S E+ V ++L GAV++ K Sbjct: 202 LAQGKYLGPLHGIPYGLKDIIAVPHYKTTWGSRTFKNQVLDSEAYVYRRLKSAGAVLVAK 261 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 262 LVTGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 313 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++PT+G +R ++S + SLD+ G R+ D A++L I G D Sbjct: 314 GSIAYPAARCGVTALRPTFGTVARTDVMSISESLDKLGPFCRSAVDCAVVLDTIRGTDAG 373 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + + + D I +TVG +D + + L G K+V Sbjct: 374 DPSSREVALGD---PFHVDITKLTVGY------------LDDAEMEVVDVLSSKGVKLVP 418 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 L +T ++ + I++ + LA +D + EG D + YE + E++ Sbjct: 419 FKLNYTVESVQS--ILNITMDTDMLAHFD----NWQREGHD--DDYEAQDQ--WPVELRR 468 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 +I Y++A++ R + R+ ++F VD + T LG Sbjct: 469 ARLIPAV---------DYIQAQRARGKLIREIKDSFT--VDAFVGNVTDWERVCLG---- 513 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 N+ G+P + VP L + P Sbjct: 514 -----------------NLVGMPVVVVPTGLKSIENP 533 >gi|329848968|ref|ZP_08263996.1| chain B, X-Ray Structure Of Native Peptide Amidase From Stenotrophomonas Maltophilia At 1.4 A [Asticcacaulis biprosthecum C19] gi|328844031|gb|EGF93600.1| chain B, X-Ray Structure Of Native Peptide Amidase From Stenotrophomonas Maltophilia At 1.4 A [Asticcacaulis biprosthecum C19] Length = 521 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 133/499 (26%), Positives = 223/499 (44%), Gaps = 53/499 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGD 67 V+E + L+ D +AV+L + + AI+ + ++++ I VV A A A+ D+ R Sbjct: 48 VAELQAALQRGDFTAVQLTQAALDAIKAKDGELHSVI-VVNPDALAQAKAIDEARKAGKS 106 Query: 68 ARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIP+ IKD T + T A S L ++ V +L GA++LGK N+ E Sbjct: 107 LGPLMGIPVLIKDNVETADNMATTAGSLALKDNITRRDAPVVARLRAGGAIILGKTNLSE 166 Query: 127 FAMGSSNETSYYGPVISPWRSM-----DSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDT 180 +A S + +S W ++ + DK T GSS GS AAVA ++GT+T Sbjct: 167 WANIRSTRS------MSGWSAVGGLVANPHDKARTACGSSSGSGAAVAANFAPLAVGTET 220 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+ PAS G VG+KPT G SR ++ + + D G + R+V D A ++ +AG D Sbjct: 221 DGSVTCPASMNGLVGLKPTVGLVSRTHVVPISHTQDTPGPMGRSVSDVAAMMTVMAGSDP 280 Query: 241 CDATCVNLPV--PDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + DY L + ++G+ VG+ ++ R+ P ++ + L AGA Sbjct: 281 ADGATMEADKFRSDYAAGLSKDYLKGVRVGVLRD-RIGS-DPKTAAVFEAALKTLTKAGA 338 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-NTRSIG-- 354 +++I A + + E ++L Y + V+ + + ++ NT Sbjct: 339 VLIDIKESQVPGLGEAEWTVLQYELKADLNAYLATTPAV-VKTRTLADVIAFNTAHAKEE 397 Query: 355 ---FGQE------VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 FGQE K + YVL+S + A K+ L+K + V V++ Sbjct: 398 MPFFGQEFFEQAQTKGDLATPEYVLAS--VKAKTSSALKLDGLLKAN-------NVTVLV 448 Query: 406 TPTTPTSAF--PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +PT + P+ ++ S + +G P ++VP + +P+GL Sbjct: 449 SPTYGPAWMSDPIWGDQYTGPSATQLP--------ATSGYPHLTVPMGDVQ-GLPVGLSF 499 Query: 464 IGQPFREETLFSVGQIIEK 482 IG + E L G E+ Sbjct: 500 IGPRWSEAALLKAGYAFEQ 518 >gi|262275282|ref|ZP_06053092.1| amidase [Grimontia hollisae CIP 101886] gi|262220527|gb|EEY71842.1| amidase [Grimontia hollisae CIP 101886] Length = 454 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 22/307 (7%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N ++VS L + + +EL + ++ +NSNS + E + +K AE S R Sbjct: 8 NRLSVSHLSQLLSNNIMDPIELFERSLEKAKNSNSIFTFFCESIGRKE---AEYSYLRFK 64 Query: 65 -NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKL 122 N +L+GIP+ KD T S I + P ++++ + + G +GK Sbjct: 65 KNKKLSNLDGIPVCWKDNIDIANCPTSNGSIIPESKIPKNHDAYIVECAKKVGLTSIGKT 124 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E A S++G +P+RS + PGGSS GS+ AVA + ++GTDT G Sbjct: 125 NLSELAFSGIGINSHFG---TPYRSKQHGEIKVPGGSSSGSAIAVAEGIVPFAVGTDTAG 181 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+F G VG +PT + GI++ +PSLD G + V D L A+ G C Sbjct: 182 SIRIPAAFNGLVGYRPTASFHRKEGIVTLSPSLDSVGTLANNVSDCLSLNNAMNG---CL 238 Query: 243 ATCVN-LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + + + +D+S+ M V + + + I+ L +AG KI Sbjct: 239 PQTIKPADINNISVTVDESLIDMVVT----------DENVKNDFYKTINSLSNAGVKIKT 288 Query: 302 ISLPHTQ 308 SL Q Sbjct: 289 KSLSSIQ 295 >gi|290891093|ref|ZP_06554155.1| hypothetical protein AWRIB429_1545 [Oenococcus oeni AWRIB429] gi|290479057|gb|EFD87719.1| hypothetical protein AWRIB429_1545 [Oenococcus oeni AWRIB429] Length = 488 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 130/523 (24%), Positives = 219/523 (41%), Gaps = 83/523 (15%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 S + +R S+ +LV+ + IE NS++NA V +A A EE+ + IN + Sbjct: 5 SRQAELVREGITSSSDLVEQSLNKIEKGNSRLNA---VTYLRADRALEEAKR--INDHGQ 59 Query: 70 DLEGIPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 G+PI +K G A S +L Q L G +++G+ N EF Sbjct: 60 PFFGVPILLKGLGQKLAGEPATASSRLLKKLVADQTDFYVQALQKAGFIVIGQTNAPEFG 119 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + + + YGP +PW + D ++ G S G +S+ A F+ AS G+D GGSIR PA Sbjct: 120 FKNITDPTLYGPTRNPW----NIDYYSGGSSGGAASSMAADFVSIAS-GSDGGGSIRIPA 174 Query: 189 SFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 SF+ +G+KPT GR + ISFA +TR+VRD+A LL AI Sbjct: 175 SFSSLIGLKPTRGRIPVGPTDWRTWQGASISFA--------LTRSVRDNARLLDAIQTVQ 226 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAK 298 A L + +DQ + +T+ + + +S + + +++ G + Sbjct: 227 PAAAFTTPLYEAGFFAGIDQLDRNLTIAYTTKSPVGTEVSDEAKTAVENAVDFIRSEGFQ 286 Query: 299 IVEISLP-HTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKDILE--MYENTRSIG 354 + E P + + YY+++ E ++ A +G+ ++ +++ +Y+ + + Sbjct: 287 VEEQENPLDGKEIMQLYYLMNAGETAAMFADIEEGIGRPTNMQDMELMSWVIYQAGKLVT 346 Query: 355 FGQ--EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G+ + + I +Y ++ F + D+ LTPTT Sbjct: 347 AGEYSQALSKWDIASYQMNQ------------------------FHENYDLYLTPTTAYP 382 Query: 413 AFPLGKEENNSGSMGH----------------IYNDV--------FTVAVNMAGLPAISV 448 A L E + +G IY+ FT N+ G PAIS+ Sbjct: 383 APKLTDELVSPELLGRMKEVTSLNSSFERQQLIYDAFLPSLALTPFTQQANLTGEPAISL 442 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P L +PLG+Q RE L + ++ EK + HK Sbjct: 443 PTHLTAAGLPLGIQFQAAKGREIDLLRIARLFEKHNLFHFLHK 485 >gi|126661760|ref|ZP_01732759.1| amidase [Flavobacteria bacterium BAL38] gi|126625139|gb|EAZ95828.1| amidase [Flavobacteria bacterium BAL38] Length = 546 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 124/449 (27%), Positives = 207/449 (46%), Gaps = 45/449 (10%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 +NA I + A A + D + + G+PI +KD +G+ T A + L Sbjct: 124 LNAIISI-NDNAVEEARQCDLKRSQKKIHPIYGMPILLKDNINAEGMPTTAGAVALKN-N 181 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA--MGSSNETSYY---GPVISPW-RSMDSTDKF 154 + + ++L G ++LGK N+ E+A + S + Y G ++P+ R++ F Sbjct: 182 SSQNAFIVKQLIAMGGIVLGKANLSEWAYFLCDSCPSGYSAIGGQTLNPYGRTI-----F 236 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 GGSS GS AVA A++G++T GSI P+S VG+KPT G+ SR GII + + Sbjct: 237 DTGGSSSGSGVAVAANYAVAAVGSETSGSIISPSSQNSLVGLKPTIGKVSRTGIIPISST 296 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS-IQGMTVGIPKEYR 273 LD AG + + V D+AILL AI GYD D + V ++ + ++ ++G GI K Y Sbjct: 297 LDTAGPMAKNVVDTAILLSAIMGYDNEDESSVKSSNTNFWSSFSENELKGKRFGIFKSY- 355 Query: 274 LDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 LD + ++Q I LK GA+I+EI + ++ + A+ ++L +Y Sbjct: 356 LD------NAVYKQTIENLKLQGAEIIEIESQNVNFS--GFVTFLNADMKADLPKY---- 403 Query: 334 YGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 K +YEN +++ + I S Y T+ + DF Sbjct: 404 ------LKSYSSVYENFKTVDDFVAFNKKDTI-----SRIPYGQALFEGIVAETIFEEDF 452 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 E ++ + S F +++N ++ I N+ + MA P ++VP Sbjct: 453 -EKLKKTFH-----SEAVSFFETPIKKHNLDAILSI-NNYNSGHAAMAKYPCLTVPMGYN 505 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + P+G+ I +PF E+ L +G EK Sbjct: 506 DSGEPIGITFITRPFEEDKLLKIGYAFEK 534 >gi|255946996|ref|XP_002564265.1| Pc22g02210 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591282|emb|CAP97509.1| Pc22g02210 [Penicillium chrysogenum Wisconsin 54-1255] Length = 575 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 117/475 (24%), Positives = 194/475 (40%), Gaps = 79/475 (16%) Query: 71 LEGIPIGIKDCFATKGIHT-----QACSHILDGFR-PHYESTVTQKLWDNGAVMLGKLNM 124 L G + IKD + G+ T Q H DG+ ++ V ++ G ++ G Sbjct: 104 LRGRTVAIKDNISVGGLPTTLGMPQTLFHQEDGYPISPIDAVVVSRILRAGGIIKGTSTC 163 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA-------------GFL 171 + F + TS GPV +P +T GGSS GS+ VA G Sbjct: 164 ESFCASPLSFTSATGPVHNPL-----LHNYTAGGSSSGSAVLVAAHRLALKRSDSSTGHT 218 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 SIGTD GS+R PAS+ G G+KPT+G G S +P +D G + + D A L Sbjct: 219 VELSIGTDQAGSVRIPASYNGLYGLKPTFGLVPYTGAGSMSPMIDHLGPLAAELEDVAAL 278 Query: 232 LKAIAGYDECDA-----TCVNLPVPDYERALDQSIQGM----------TVGIPKE-YRLD 275 L+ +AGYD D T + V Y + L Q+ Q M VG+ +E + + Sbjct: 279 LEVMAGYDGYDPRMTPETPLVHQVKPYLKLLLQARQEMRSTSRPGQKLRVGLLEESFHMP 338 Query: 276 YLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYII-------------SPAE 321 ++ + D ++ + + GA +VE+S+P Q PA + SP+ Sbjct: 339 GVAADVRDIVYKAATQYFEAVGASVVEVSVPMHQQG-PAVWTAATRPSMSSYLCQGSPSG 397 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 S L+ + +++ E D L N + IM+ C + Sbjct: 398 HLSFLSPHTQIKWPPSQETYDTLTC-SNPAVV--------NIMLSEKFSREACKGGLEAK 448 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV-------- 433 A ++ ++ + A Q VD+++TP PT A P + G I + + Sbjct: 449 AHRLVFALRAAYDAAL-QHVDILVTPCAPTVAMPHPNPKGRDGRRASILDRLGAAVGLTS 507 Query: 434 FTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIEK 482 T N+ G P ++V + +P+G+Q++ + + +E L + E+ Sbjct: 508 NTCPFNVTGHPGMNVHCGFSTTEGHPGVPLPVGMQIVARHWADEQLIEAAALFER 562 >gi|126734509|ref|ZP_01750255.1| amidase family protein [Roseobacter sp. CCS2] gi|126715064|gb|EBA11929.1| amidase family protein [Roseobacter sp. CCS2] Length = 469 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 25/309 (8%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + +M ++ + + I V L + Y+ AI+ + Y V+ +ARA A+ + Sbjct: 16 MQDWRWMTAADLGRAIGAGQIDPVALTEVYLDAIDAHEFRDRIYARVMHDRARAEAKAAS 75 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G R L+G+P+ KD F T G+ T+A + ++ G P ++ + + G V L Sbjct: 76 ARAKAGMRRSALDGVPVSWKDLFDTAGVGTEAGTALMAGRVPDQDAEMLKAATAAGLVCL 135 Query: 120 GKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 GK +M E A N + P ++ ++ PGGSS G++ +VA L AA IG Sbjct: 136 GKTHMSEIAFSGLGLNPITATPPCVNDHEAV-------PGGSSSGAATSVAFGLAAAGIG 188 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +DTGGS+R P+++ VG+K T+GR S G++ + D G + R+V D+ +LL + G Sbjct: 189 SDTGGSVRIPSAWNDLVGLKTTHGRLSLEGVVPLCLTFDTVGPLCRSVEDANLLLAVLEG 248 Query: 238 YDECD-ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D A C S++G+ + D + ++ ++ L+ AG Sbjct: 249 GKPADLAGC--------------SLEGLRFMVLDTIVFDEIRGAPRDAFEDAVNRLQAAG 294 Query: 297 AKIVEISLP 305 A+I + P Sbjct: 295 AQIEHRAFP 303 >gi|83855253|ref|ZP_00948783.1| amidase family protein [Sulfitobacter sp. NAS-14.1] gi|83843096|gb|EAP82263.1| amidase family protein [Sulfitobacter sp. NAS-14.1] Length = 436 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 132/465 (28%), Positives = 200/465 (43%), Gaps = 61/465 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 I V L +Y+ AI+ + Y V A +A A A + R G L+G+PI K Sbjct: 15 IDPVVLCQTYLDAIDAHPLRDRIYARVTADRALAEAGAARDRARAGQRLSPLDGVPISWK 74 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SNETSY 137 D F T GI T+A S +L P ++ V G V LGK +M E A N ++ Sbjct: 75 DLFDTAGIATEAGSALLKDRVPDRDARVLANATAMGLVCLGKTHMSELAFSGLGYNPSTA 134 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGI 196 P ++ D+ G S +AA F L AA+IG+DTGGS+R PA++ VG+ Sbjct: 135 TPPCVN--------DEAAVSGGSSSGAAASVAFGLAAAAIGSDTGGSVRVPAAWNDLVGL 186 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G + A D G + R+V D+++LL G D + Sbjct: 187 KTTSGRVSLEGAVPLAAKFDTVGPLCRSVEDASLLLALTEGSKPMDMGSTD--------- 237 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 I+G I + D + + ++ LK+AGA I +I + A+P Sbjct: 238 ----IEGRRFAILRTVAFDDIEDAPAAAFDDAVARLKEAGAVIEDIDFEPIKEAMPLSGC 293 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + AEA YGL +D++E + +G E+ R +G S Y Sbjct: 294 LYTAEA-----------YGLW---RDVIEANPDAM---YG-EILERFRLGKS-HSGPDYV 334 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-----SGSMGHIYN 431 + + + +IR + +A G D +L PT P L + E S ++ + N Sbjct: 335 AAWAKIDQIRAA----YVKAV-AGYDAVLIPTAPLLPPKLDRLETEHDYYVSANLMTLRN 389 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 T N+ GL A+++P G+ L+GQPF EE L + Sbjct: 390 ---TRIGNLMGLAAVTLPTGTPS----CGIMLMGQPFGEEHLLRI 427 >gi|163760061|ref|ZP_02167144.1| Amidase [Hoeflea phototrophica DFL-43] gi|162282460|gb|EDQ32748.1| Amidase [Hoeflea phototrophica DFL-43] Length = 443 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/479 (25%), Positives = 206/479 (43%), Gaps = 52/479 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 ++ SA + V + + +E + +N E+ A AE D +A L G+P+ Sbjct: 2 TQTTSAAQAVKTALTKLEK-QAALNLATELNEPAALEIAERLDA-ATGSEAGLLHGVPLI 59 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +K A G+ L + + Q+L + GA+ + NM E A G+++ ++ Sbjct: 60 VKANIAVAGMRHDGACPALSASIAKKNAAIVQRLCEAGAIPVAMANMHELAFGTTSANAH 119 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G V +P T GGSSGG++AA+ + +GTDTGGS R PA+F G G++ Sbjct: 120 FGSVGNPHDPSRMT-----GGSSGGTAAAIGAGIFDIGLGTDTGGSGRIPAAFCGCAGLR 174 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 PT GR GI+ +LD I+ + A L AI PV ++ A Sbjct: 175 PTTGRYPGEGILKLTDTLDTISIMGSDMEHLAKLDAAI---------MSEAPVEAHDAA- 224 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ-YALPAYYI 316 I+ + VG P ++ + K ++ + L AG ++E + P + A + Sbjct: 225 --QIRLLVVGDPFWLGINE---EMGKLGRRALDKLAAAGVALIERNAPELETLTAAAGFP 279 Query: 317 ISPAEASSNLARYDGVRYGL-------RVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 I+ E N V GL R+ D+ +Y+ E +R Sbjct: 280 IALFETERNWQLLASVLAGLSLAEFADRIASPDVRGLYQQMARGEMPGEDAYRA------ 333 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEE--NNSGSM 426 D H R +++ F E G D I+ PT SA P+ + E + G Sbjct: 334 ----AMDHH-------RPELQKALAGLFSETGADAIVFPTLARSAPPIDETEMIDIDGQS 382 Query: 427 GHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ + + ++A LPA+++PA LC +P GL+L+G + L ++G+ IE + Sbjct: 383 LPLFPTMTRRELTASIAALPALTLPAGLCGDGLPFGLELVGPSGSDRRLLAIGRAIEAK 441 >gi|194743936|ref|XP_001954454.1| GF16723 [Drosophila ananassae] gi|190627491|gb|EDV43015.1| GF16723 [Drosophila ananassae] Length = 542 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 129/514 (25%), Positives = 220/514 (42%), Gaps = 59/514 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L +++ E R RLRS+ +++VELV +YI IE+ NS +NA IE A A+ +D I Sbjct: 44 LLLLSIQELRSRLRSRQLTSVELVKAYIDRIESVNSHLNALIESRFPAALKEAQHADDLI 103 Query: 64 ING----------DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 + R L G+P+ +K+ A +G+ S + + + +KL Sbjct: 104 AGCASPEAVEKLFEERPLLGLPMTVKESCALEGMTFSVGSLFRKNVKANADGEAVKKLRT 163 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA+ L E+ +T G I+P+ + T + GG + A + F Sbjct: 164 AGAIPLLVSATPEYCFSIETDTFLNGRSINPY-DFERTPGGSSGGEGSLNGAGASLF--- 219 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII--SFAPSLDQ---AGIITRTVRDS 228 IG+D GGSIR P+ + G G KP+ G S G S P ++ G +TR D Sbjct: 220 -GIGSDIGGSIRIPSQYCGIFGHKPSGGVVSVKGHFPDSSDPGIEHYLVEGPMTRFAVDL 278 Query: 229 AILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 LL+ +AG + + PV L++ +G L ++ +D++ + Sbjct: 279 NDLLRVMAGQENSKKLRLTEPV-----QLNKIKVHYALGFDGLNGLIHMP--VDESIRNA 331 Query: 289 I----SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY---GLRVEGK 341 I + LK G ++ + LP+ ++ A S +A DG+ Y G GK Sbjct: 332 ICRAATHLKTLGLEVTQSQLPNLSNSVEM--------ALSGIAGQDGMVYLLEGPEESGK 383 Query: 342 DILEMYENTRSIGFGQE------VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 ++E RS+ GQ + ++ T +R + YL ++R +F++ Sbjct: 384 VRQTLWEILRSL-VGQSSYTTNALMFELLRRTNAFMTRAKVNQYLEESRLRI---GEFSK 439 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 V+L PT A + S+ ++ +T+ N+ GLP VP L E+ Sbjct: 440 LLGDN-GVLLFPTLNLPA------PRHKWSVFSLWGVDYTLIFNVLGLPVTHVPMGLDER 492 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +P G +I P ++ V +E+ G ++P Sbjct: 493 GLPYGFSVIAGPNQDRLCLRVAVELERAFGGWKP 526 >gi|296090171|emb|CBI39990.3| unnamed protein product [Vitis vinifera] Length = 625 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM V E + +++K I++ EL ++ ++ N + A + + A A+E+D+ Sbjct: 150 DIAFMTVLELGELIKTKQITSEELTQIFLHRLKRYNLVLEAVVTYTEELAYKQAKEADEM 209 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD + T S E++V +KL GAV++ K Sbjct: 210 LARGIYLGPLHGIPYGLKDIISVPQYKTTWGSKTFKDQVLDIEASVYKKLKSAGAVLVAK 269 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++++ G SSG +++ AG + A IG++T Sbjct: 270 LATGSLAY---DDIWFGGRTRNPW----NIEEYSTGSSSGPAASTSAGMVPFA-IGSETC 321 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++PT+G R G++S + SLD+ G R+ D I+L AI G D Sbjct: 322 GSITYPAARCGVTALRPTFGAVGRTGVMSISESLDKIGPFCRSAADCTIILDAILGKDPD 381 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + ++ + D I +TVG YL D + + L+ G K+V Sbjct: 382 DPSSKDISLDD---PFSVDITNLTVG--------YL----DDAEMEVVRILESKGVKMVP 426 Query: 302 ISLPHT 307 L +T Sbjct: 427 FKLNYT 432 >gi|229172645|ref|ZP_04300204.1| Amidase [Bacillus cereus MM3] gi|228611116|gb|EEK68379.1| Amidase [Bacillus cereus MM3] Length = 536 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 149/302 (49%), Gaps = 20/302 (6%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V+E + + +S EL Y IQ + + +NA E+ A + +R +N Sbjct: 73 VNELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNAVTEINPNAMEEARKLDKERDLN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L G+P+ +KD TK + T A +++L + ++T+ +KL + GA +LGK NM Sbjct: 133 KKS-NLYGMPVIVKDNVQTKNVMPTSAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTP-----GGSSGGSSAAVAGFLCAASIGTD 179 E+A N S+ P + + + + P GSS GS+ VA +IGT+ Sbjct: 192 SEWA----NYLSFTMPSGYSGKKGQNLNPYGPITLDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTVRD+A L + YD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRSGIIPLAETLDTAGPMARTVRDAATLFNIMVSYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + DY + L ++G VG+ + +D K ++ L+DA Sbjct: 308 EKDAMTEKMKDKERIDYTKDLSIDGLKGKKVGVL--FSIDRQDENRKKVAEKIRKDLQDA 365 Query: 296 GA 297 GA Sbjct: 366 GA 367 >gi|241207169|ref|YP_002978265.1| amidase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861059|gb|ACS58726.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 463 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 135/500 (27%), Positives = 222/500 (44%), Gaps = 57/500 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVEL---VDSYIQAIENSNSQMNAYIEVVAQKARAAAE 57 M+E + + + E R R K +S +E ++ +I A E S S + Y + ARA A+ Sbjct: 1 MTETD-LTIRELRQRFADKSLSPLEYWLSLEDHIAAWEPSISALYLY---DPESARAQAK 56 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S +R G+ L+GIP+ +K+ ATKG + + ++ ++ +L ++GA Sbjct: 57 ASTERWAKGETLGSLDGIPVTLKELIATKGQPVPSGTRAVELRPADADAPAAARLREDGA 116 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V+ K ++ M SS +S++ +PW + + PGGSS G+SAA A I Sbjct: 117 VIFAKTTCPDYGMLSSGLSSFHPLSRNPWNTTQN-----PGGSSAGASAAAAAGYGPLHI 171 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKA 234 GTD GGS+R PA +TG G KP++GR I P G + RTV D+A + Sbjct: 172 GTDIGGSVRLPAGWTGIFGFKPSHGR------IPADPYYVGRCVGPMARTVEDAAFSMAT 225 Query: 235 IAGYDECDATCVNLPVPDYERA-LDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQG 288 ++ D D T +LP D++ LD + GM +G+ + D + ++ +Q Sbjct: 226 LSRPDWRDGT--SLPPNDFDWMDLDIDLSGMKIGLMLDAGCGLAVDDEIRAAVEAAAKQ- 282 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + AGA I+ + T+ L + N R R G DI ++ + Sbjct: 283 ---FEAAGATILSVQPVLTRAML---------DGLDNFWRS-------RFWG-DIADLDD 322 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 N R ++ M G + + + ++R R FTE VD +L+PT Sbjct: 323 NRRD-SILPYIRDWAMGGADISGVDAVKG-FNQTIEMRKSCGRLFTE-----VDALLSPT 375 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P ++P + + FTV NM+ PA S+ MP+GLQ++G F Sbjct: 376 NPIISYPAEWASPTNDPALPFEHIGFTVPWNMSEQPAASINCGFSRSGMPIGLQIVGPRF 435 Query: 469 REETLFSVGQIIEKEAGYFR 488 + + + + E G R Sbjct: 436 DDMRVLRLSKAFEDWTGGVR 455 >gi|167410134|gb|ABZ79725.1| fatty acid amide hydrolase 2 [Macaca fascicularis] Length = 532 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/497 (23%), Positives = 202/497 (40%), Gaps = 59/497 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R + + +++V +YI I++ N +N ++ ++A A D+++ D LE Sbjct: 60 IRQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLEN 119 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +K+ F +G+ + ++TV L + GA+ LG N E Sbjct: 120 KWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAISKTDATVVALLKEAGAIPLGITNCSEL 179 Query: 128 AMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG RS + D + GGSSGG +A +G+D GGSIR Sbjct: 180 CMWYESSNKIYG------RSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRM 233 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KP+ G G A G + R D A +LK +AG Sbjct: 234 PAFFNGIFGHKPSPGVVPNKGQFPMAVGGQELFQCTGPMCRYAEDLAPMLKVMAG----- 288 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLD-----YLSPTIDK----TWQQGISWL 292 P +R LD + + K Y ++ +L +D+ ++ + L Sbjct: 289 --------PGIKRLKLDTKVHLKDL---KFYWMEHDGGSFLMSKVDQDLILAQKKVVVHL 337 Query: 293 KD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + + L +Y+ + + A+ V L GK + ++E + Sbjct: 338 ETILGASVQHVKLKKMKYSFQLWITMMSAKGHDGKEPLKFVDL-LGDHGKHVNPLWELIK 396 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCY--DSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPT 408 G V IG +L + + Y + + + ++++ E G D V L P+ Sbjct: 397 WC-LGLSVYTIPSIGLALLEEKLKYNNEKYQKFKAVEESLRKELLEML--GDDGVFLYPS 453 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT A + + +N +T N GLP P L K +PLG+Q++ PF Sbjct: 454 HPTVA------PKHHVPLTRPFNFAYTGVFNALGLPVTQCPLGLNVKGLPLGIQVVAGPF 507 Query: 469 REETLFSVGQIIEKEAG 485 + +V Q +EK G Sbjct: 508 NDHLTLAVAQYLEKTFG 524 >gi|134098489|ref|YP_001104150.1| amidase [Saccharopolyspora erythraea NRRL 2338] gi|133911112|emb|CAM01225.1| probable amidase [Saccharopolyspora erythraea NRRL 2338] Length = 491 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 127/509 (24%), Positives = 223/509 (43%), Gaps = 68/509 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEES 59 +S+L + E +R +++S E++ +Y+ I+ N +NA + +K A + Sbjct: 18 ISDLVLLDAVELSWLIRRREVSCAEVMRTYLDHIDRFNPLVNAIVSRADDEKLLEQAAKR 77 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D+ + G+ + + G PI +KD +G T S IL G + +++ D GA++ Sbjct: 78 DEELARGEYKGWMHGFPIAVKDLADAEGFPTSKGSPILAGQTADDDEIAVRRMRDAGAIV 137 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF----LCAA 174 +GK N+ EF +GS +G ++P F P S+GGSS A + Sbjct: 138 IGKTNVPEFGLGSHTFNRVFGTTVNP---------FDPSRSAGGSSGGAAAALSLRMLPV 188 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + G+D GS+R PA+F +G++P++GR + G +S PS+ AG + RTVRD A+LL Sbjct: 189 ADGSDFMGSLRNPAAFCHVLGLRPSFGRVPKPGFLS-EPSV--AGPMARTVRDLAMLLST 245 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPTIDKTWQQGISWL 292 +AG D V + L+ + G+ +G ++ YL P + + Sbjct: 246 MAGPDPRAPLGVEQDPAVFAEPLEHRVDGLRIGWLGDFG-GYLPTEPGVLAVCASALGTF 304 Query: 293 KDAGAKI--VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY--E 348 ++ G + VE LP Q A + L R+ + G+ + E++ E Sbjct: 305 EEIGCVVEPVERELPVEQ-----------AWETFLLWRH-------WMTGQTLHELHADE 346 Query: 349 NTRSIGFGQ---EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD----FTEAFEQGV 401 +TR+ + EV+ + +G +++ L RD A Sbjct: 347 STRASLKPEAVFEVEGYLRMGVREIAA--------------ALTGRDEWHAHVAALFDDY 392 Query: 402 DVILTPTT---PTSAFPLGKEENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKM 457 D ++ PT P A E +M + + TVA ++G P I++PA + Sbjct: 393 DFLVAPTAQIFPFDAALRWPSEVGGRTMDTYHRWMETVAPWTLSGHPVINLPAGFGAADL 452 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGY 486 P+G+QLIG E L + E+ + + Sbjct: 453 PMGVQLIGPNHGELDLLRLAHAYERASDW 481 >gi|241518431|ref|YP_002979059.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862844|gb|ACS60508.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 447 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/234 (32%), Positives = 118/234 (50%), Gaps = 9/234 (3%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++SE L + ++++LVD +A+ + S +A+I + A +A AE SD+R Sbjct: 1 MQSLSEVALALATGRTTSMQLVD---EALSRAVSAPHAFISIQADQALVRAEASDRRHRE 57 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLN 123 G +G+PI +KD G T A S I P E + V + G + +GK N Sbjct: 58 GKPLSAFDGVPIAVKDLLDIAGTVTTAGSEIRRNLAPAREDAEVVSSIHGVGLISIGKTN 117 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 + EFA ++G I + + ++ PGGSS GS+ AV + A+IG+DT GS Sbjct: 118 LSEFAFSGLGINPHFGTPIPGY----APEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 IR PA+F G G +P+ GR G+ A S D G I R+ D ++ +A+ G Sbjct: 174 IRVPAAFNGLHGFRPSTGRYPMRGVHPLASSFDTLGPIARSASDCLLIDQAMRG 227 >gi|33595688|ref|NP_883331.1| putative amidase [Bordetella parapertussis 12822] gi|33565767|emb|CAE36311.1| probable amidase [Bordetella parapertussis] Length = 481 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 124/486 (25%), Positives = 194/486 (39%), Gaps = 38/486 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + + +E R++ +S ++ + + ++ N +NAY + A S+ R Sbjct: 10 DLAYASAAELARLYRARAVSPLDHARAVLDMVDRWNPVVNAYCHLDRTLTLQQAAASEAR 69 Query: 63 II-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLG 120 + + +G+ GIKD +G T S +P E + L + G V +G Sbjct: 70 WMRDAPLGPADGVTYGIKDILLARGAPTGYGSRAACVAQPATEDAPAAACLREAGGVFVG 129 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF + + G + W + + T GGSSGG++ A A + +GTD Sbjct: 130 KTTTSEFGWKGTADNLLTGATRNVWDT-----RLTSGGSSGGAACAAAAGMGTLQVGTDG 184 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PASF G G+K T+GR +L G + R V D A L + I D Sbjct: 185 GGSTRIPASFCGIAGMKATFGRVPAWPAGPML-TLSNVGPMARNVADLACLQRIIGQPDP 243 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D V P P +ERA S+QG+ +G+ D P + Q L GA+++ Sbjct: 244 RDWHAV--PAPRHERAPPASLQGLRIGL--HLDRDACDPEVAAVIGQAAERLAAHGARLI 299 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 + L P + NL R + G I + G Sbjct: 300 DTRL--------------PLDGCDNLIRAH-WQAGAAWLAAQIPPQRQALLDPGLQAAAA 344 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 H Y RA R + Q D++LTPT P F G+E Sbjct: 345 H---------GRELPLPDYYRAMIGRQKLGETMAAHLAQ-FDLVLTPTVPILPFAAGREA 394 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 ++ S + + +T N+ PAIS+PA +P+GLQL +++E L V + Sbjct: 395 PEDAASQDWLDWNPYTYPFNLTRHPAISLPAGFSAAGLPVGLQLAAGLYQDEWLLGVAAL 454 Query: 480 IEKEAG 485 +E G Sbjct: 455 VEACLG 460 >gi|15595901|ref|NP_249395.1| amidase [Pseudomonas aeruginosa PAO1] gi|9946587|gb|AAG04093.1|AE004506_3 probable amidase [Pseudomonas aeruginosa PAO1] Length = 464 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 124/505 (24%), Positives = 203/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPGEYYEHLLAHIQRWEPHLNALYRFDPQRVREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPAPCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAATAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + V D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEVLDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D++ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRSLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|330895289|gb|EGH27627.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas syringae pv. japonica str. M301072PT] Length = 177 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/179 (44%), Positives = 105/179 (58%), Gaps = 5/179 (2%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++E L K S+ EL + I + Q+N++I + A A+ +D R G Sbjct: 4 MTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARRAAG 63 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + L G P+ KD F T+GI T S +LD F+ Y++TV +L G V LGK NMDE Sbjct: 64 ENGPLLGAPLAHKDLFCTQGIRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDE 123 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 FAMGS+NE+S+YG V +PW + PGGSSGGS+AAVA L A+ GTDTGGSIR Sbjct: 124 FAMGSANESSHYGAVKNPWNL-----ECVPGGSSGGSAAAVAARLLPAATGTDTGGSIR 177 >gi|308503098|ref|XP_003113733.1| hypothetical protein CRE_26062 [Caenorhabditis remanei] gi|308263692|gb|EFP07645.1| hypothetical protein CRE_26062 [Caenorhabditis remanei] Length = 535 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 121/513 (23%), Positives = 219/513 (42%), Gaps = 72/513 (14%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L ++ +++ + K+IS+ LV+SYI IE N+ +NA + + AR A E D + Sbjct: 50 LLLISATQAVRMISKKEISSTALVESYIHRIEQVNNTINAAVIKLFDSARQQATEVDTFM 109 Query: 64 INGDARDLE---------GIPIGIKDCFA------TKGIHTQACSHILDGFRPHYESTVT 108 D D++ G+P +KD T GI+ + + + + Sbjct: 110 ALADEEDIQKKLEERPLYGVPFTMKDALEVENEIITCGIYNRKAT------KCDRTAEAI 163 Query: 109 QKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA 168 ++L G ++L N+ E M + + YG +P+ + T GGSSGG A + Sbjct: 164 KRLKAAGGILLAVTNVPEVCMWVESVNTIYGRSKNPYDARRMT-----GGSSGGEGALLG 218 Query: 169 GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII----SFAPSLDQAGIITRT 224 +G+D GGSIR PA F G G+KPT G +G + + + + G + R Sbjct: 219 AAGSVVGVGSDIGGSIRMPAFFNGVFGLKPTPGVIPLIGHVPEPTGYKTHMLRIGPMCRF 278 Query: 225 VRDSAILLKAIAGYDECDATCVNLPVPDYERALD----QSIQGMTVGIPKEYRLDYLSPT 280 D ++L+ +AG +A +NL P + L + I G + P E + + Sbjct: 279 AEDLPLMLRIMAGE---NARSLNLHEPVNGKKLRVFYMEGITGSPIIQPLEDEMRF---- 331 Query: 281 IDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 ++ +++L+ + + I LP ++ + Y+ +S E +++ A + L Sbjct: 332 ---ALKKAVNFLERKYDIVAQRIELPSAKHVM-EYFTLSMHEDTTDPAFN---KLMLCTN 384 Query: 340 G-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR--------CYDSHYLRARKIRTLIK 390 G K + Y G + I ++ SR D Y R R +K Sbjct: 385 GTKGEVNCYTELFKYFTGNSIHTLSGIIAGIIDSRDPPFSANHTKDLLYKRDR-----LK 439 Query: 391 RDFTEAFEQGVD-VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 R E G D ++L P+ P +A ++ + +N +T N+ +P + P Sbjct: 440 RQVKELL--GNDGILLFPSWPCTAM------FHNEPILAPFNFCYTALWNVLSVPVVQCP 491 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 L +PLG+Q+IG + + L ++ Q++E+ Sbjct: 492 LGLDSYGLPLGVQVIGNQYTDRNLIAIAQVLEE 524 >gi|300710764|ref|YP_003736578.1| Amidase [Halalkalicoccus jeotgali B3] gi|299124447|gb|ADJ14786.1| Amidase [Halalkalicoccus jeotgali B3] Length = 426 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 121/467 (25%), Positives = 211/467 (45%), Gaps = 70/467 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES--DKRIINGDARD-LE 72 LR+ DI E + ++ +E + ++ A ++ A+ R E + R + R L Sbjct: 14 LRTGDIELGEYLATFEGRVERAEPRIEALLDEPARWDRLQREAGALEARFDDPATRPPLY 73 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+G+KD F +G +A S + E+ + L + GA++LGK EFA Sbjct: 74 GVPVGVKDIFNVEGFPMKAGSTVPSETVTGPEADSVRALKEAGALVLGKTVTTEFA---- 129 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 Y+ P P R+ + TPGGSS GS+AAVA C ++G+ T GS+ +PA+F G Sbjct: 130 ----YFEP--GPTRNPHDPEH-TPGGSSSGSAAAVAAGFCPLALGSQTIGSVIRPAAFCG 182 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPTYGR G++ APS+D G T+ V + + + Sbjct: 183 IVGLKPTYGRIPIGGVLPVAPSVDHVGFFTQDVAGAQLAASVL----------------- 225 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 YE +S T+G+P+ LD P + + + ++ L+ AG ++ ++L A+ Sbjct: 226 YEHWRPESTGVPTLGVPEGPYLDQADPAAREAFDEQVARLETAGYEVRRVALLEDIDAIN 285 Query: 313 AYY--IISPAEASSNLARY--DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 + +++ A S+ R+ G RY + ++ + G+ + RI G Sbjct: 286 DRHQRLVAAETALSHSERFAEHGDRY-----AEATADLIREGHDVDVGELCEARIGRGA- 339 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 +R ++R+ ++G+DV + P P A P G ++ Sbjct: 340 ----------------LREAVEREMD---QEGIDVWVCPGAPGPA-PEGIDDTG------ 373 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + V + GLP +++PA + +PLGLQ + + +E+L S Sbjct: 374 --DPVMNLPWTHCGLPTMALPAGELD-GLPLGLQCVARYGEDESLLS 417 >gi|83941775|ref|ZP_00954237.1| amidase family protein [Sulfitobacter sp. EE-36] gi|83847595|gb|EAP85470.1| amidase family protein [Sulfitobacter sp. EE-36] Length = 436 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 132/469 (28%), Positives = 200/469 (42%), Gaps = 69/469 (14%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 I V L +Y+ AI+ + Y V A +A A A + R G L+G+PI K Sbjct: 15 IDPVVLCQTYLDAIDAHPLRDRIYARVTADRALAEAGAARDRARAGQRLSPLDGVPISWK 74 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SNETSY 137 D F T GI T+A + +L P ++ V G V LGK +M E A N ++ Sbjct: 75 DLFDTAGIATEAGTALLKDRVPDRDARVLANATAMGLVCLGKTHMSELAFSGLGYNPSTA 134 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGI 196 P ++ D+ G S +AA F L AA+IG+DTGGS+R PA++ VG+ Sbjct: 135 TPPCVN--------DEAAVSGGSSSGAAASVAFGLAAAAIGSDTGGSVRVPAAWNDLVGL 186 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K T GR S G + A D G + R+V D+++LL G D + Sbjct: 187 KTTSGRVSLEGTVPLAAKFDTVGPLCRSVEDASLLLALTEGSKPMDMGSTD--------- 237 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 I+G I + D + + ++ LK+AGA I +I + A+P Sbjct: 238 ----IEGRRFAILRTVAFDDIEDAPAAAFDDAVARLKEAGAVIEDIDFDPIKEAMPLSGC 293 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 + AEA YGL +D++E + +G E+ R +G Sbjct: 294 LYTAEA-----------YGLW---RDVIEANPDAM---YG-EILERFRLGK--------- 326 Query: 377 SH----YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-----SGSMG 427 SH Y+ A + I+ + +A G D +L PT P L + E S ++ Sbjct: 327 SHSGPDYVAAWAMIDQIRAAYVKAV-AGYDAVLIPTAPLLPPKLDRLEAEHDYYVSANLM 385 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + N T N+ GL A+++P G+ L+GQPF EE L + Sbjct: 386 TLRN---TRIGNLMGLAAVTLPTGTPS----CGIMLMGQPFGEEHLLRI 427 >gi|307136166|gb|ADN34007.1| amidase [Cucumis melo subsp. melo] Length = 506 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 144/293 (49%), Gaps = 16/293 (5%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLEGIPIGI 78 +++ +LV+ Y++ + N + IEV A++ KR + L GIP+ + Sbjct: 42 LTSRQLVEFYLEQVRRLNPILKGIIEVNPDALNQASQADLKRKRSSLRSLSPLHGIPVLV 101 Query: 79 KDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD ATK ++T A S L G ++ V KL GA++ GK ++ E+ S SY Sbjct: 102 KDNIATKDKLNTTAGSFALLGSIVPRDAGVVTKLRKAGAIIFGKASLSEW----SGFRSY 157 Query: 138 YGPVISPWRSMDSTDKFT---PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 P R + +T P GSS GS+ +VA + S+GT+T GSI P++ V Sbjct: 158 EPPNGWSARGGQGKNPYTMGEPCGSSSGSAISVAANMVTVSLGTETDGSILCPSTLNSVV 217 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN----LPV 250 GIKPT G SR G++ + D G I RTV D+A +L AIAG D D + + +P Sbjct: 218 GIKPTVGLTSRAGVVPISLRQDTVGPICRTVADAAYVLDAIAGADRYDNSTIEASKYIPR 277 Query: 251 PDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 Y + L + ++G +GI ++ Y + +++ LK GA +V+ Sbjct: 278 GGYGQFLRAEGLKGKRIGIVRKLYDFGHDDVFYIGAFEKVFKTLKQGGAILVD 330 >gi|89900773|ref|YP_523244.1| amidase [Rhodoferax ferrireducens T118] gi|89345510|gb|ABD69713.1| Amidase [Rhodoferax ferrireducens T118] Length = 469 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/477 (24%), Positives = 208/477 (43%), Gaps = 52/477 (10%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 +R RLR+ A ++ IQA ++ Q +A+++ +ARA A + + L Sbjct: 35 TRQRLRTGQTQATSEIERAIQAAQSPACQ-HAFVQTTFDEARAIANTPGIQT-----KPL 88 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 G+ + IKD F G T A S +L P +S +L GA +G+ +M EFA Sbjct: 89 AGLAVSIKDLFDVAGQTTCAGSVVLKDNPPAEQDSPAVARLRRAGAAFMGRTHMVEFAFS 148 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G ++P + +G S A A F+ +G+DTGGSIR PA+ Sbjct: 149 GVGTNPHFGTPVNPCSTDVPRIPGGSSSGAGVSVATGAAFI---GLGSDTGGSIRIPAAL 205 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG K T G + + +LD +TR+VRD+ + + +A + T + P+ Sbjct: 206 NGIVGFKSTARLVPTQGALPLSTTLDTVCAMTRSVRDAMLAHELLA---QRQVTRSSAPL 262 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y A+ +++ D L T+ + WQ+ ++ L+ AGA++ E++L Sbjct: 263 AAYRLAVARTLMQ-----------DELDDTVSRAWQRTLATLRRAGAQVEEVNLTEIGQ- 310 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + +A+ +LA + V + +LE + + V RI G Sbjct: 311 ------LQSIQAAGSLAAAESY-----VWHRQLLE----RNAAAYDPRVASRIQRGA--- 352 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-EENNSGSMGHI 429 S YD Y+ + R A QG D +L+PT P A P+ + + + Sbjct: 353 SMSAYD--YITLLRERQRWISQMASAL-QGFDAVLSPTVPIVAPPMAELAPGLARDAAFL 409 Query: 430 YNDVFTV----AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + VNM A+S+P + ++P+GL + R++T+ ++ IE+ Sbjct: 410 RVNALLLRNPSVVNMLDGCALSLPCQTAD-ELPVGLMVWAGALRDDTVLNIALQIER 465 >gi|242045634|ref|XP_002460688.1| hypothetical protein SORBIDRAFT_02g033220 [Sorghum bicolor] gi|241924065|gb|EER97209.1| hypothetical protein SORBIDRAFT_02g033220 [Sorghum bicolor] Length = 510 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 145/315 (46%), Gaps = 30/315 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SE + V ++ +++ LV Y+ I N ++A IEV AA + Sbjct: 32 SEFQEVTVDAIHQGFKNGSLTSTALVRFYLDQIARLNPLLHAVIEVNPDALAQAARADAE 91 Query: 62 RIINGD--ARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R + A L GIP+ +KD AT+ ++T A S L G ++ V +L GAV+ Sbjct: 92 RSASRGRCAVGLHGIPVLLKDNIATRDRLNTTAGSLALLGSVVRRDAGVVARLRRAGAVI 151 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPW--RSMDSTDKF----TPGGSSGGSSAAVAGFLC 172 LGK N E+ S + PV S W R + + + TP GSS G A A + Sbjct: 152 LGKANPSEW--------SNFRPVESGWSARGGQTLNPYVLSATPCGSSAGPGVAAAANMA 203 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 A ++G++T GSI P+SF VGIKPT G SR G+I P D G + RTV D+ +L Sbjct: 204 AVTLGSETDGSILCPSSFNSVVGIKPTVGLTSRSGVIPITPLQDTIGPMCRTVSDAVHVL 263 Query: 233 KAIAGYDECDATCVN-----LPVPDYERALD-QSIQGMTVGIP-------KEYRLDYLSP 279 I GYDE DA +P Y + L ++G +G+ + +L Sbjct: 264 DVIVGYDELDAEATGAASKYIPHGGYTQFLRIHGLKGKRIGVLDVLFQGYDDMQLAVYEK 323 Query: 280 TIDKTWQQGISWLKD 294 +D QQG +KD Sbjct: 324 HLDTMRQQGAVLIKD 338 >gi|118587285|ref|ZP_01544712.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase, A subunit [Oenococcus oeni ATCC BAA-1163] gi|118432274|gb|EAV39013.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase, A subunit [Oenococcus oeni ATCC BAA-1163] Length = 488 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 131/524 (25%), Positives = 218/524 (41%), Gaps = 85/524 (16%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 S + +R S+ +LV+ + IE NSQ+NA + A +A A++ IN + Sbjct: 5 SRQAELVREGITSSSDLVEQSLNKIEKGNSQLNAVTYLRADRALEEAKQ-----INDHGQ 59 Query: 70 DLEGIPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 G+PI +K G A S +L Q L G +++G+ N EF Sbjct: 60 PFFGVPILLKGLGQKLAGEPATASSRLLKKLVADQTDFYVQALQKAGFIVIGQTNAPEFG 119 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + + + YGP +PW + D ++ G S G +S+ A F+ AS G+D GGSIR PA Sbjct: 120 FKNITDPTLYGPTRNPW----NLDYYSGGSSGGAASSMAADFVSIAS-GSDGGGSIRIPA 174 Query: 189 SFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 SF+ +G+KPT GR + ISFA +TR+VRD+A LL AI Sbjct: 175 SFSSLIGLKPTRGRIPVGPTDWRTWQGASISFA--------LTRSVRDNARLLDAIQTVQ 226 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAK 298 A L + +DQ + +T+ + + +S + + +L+ G + Sbjct: 227 PAAAFTTPLYEAGFFAGIDQLDRNLTIAYTTKSPVGTEVSDEAKTAVENAVDFLRSEGFQ 286 Query: 299 IVEISLPHT--QYALPAYYIISPAEASSNLARYD-GVRYGLRVEGKDILE--MYENTRSI 353 + E H + + YY+++ E ++ A + G+ ++ +++ +Y+ + + Sbjct: 287 VKEQE-NHLDGKEIMRLYYLMNAGETAAMFADIEKGIGRPTNMQDMELMSWVIYQAGKLV 345 Query: 354 GFGQ--EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G+ + + I +Y ++ F Q D+ LTPTT Sbjct: 346 TAGEYSQALSKWDIASYQMNQ------------------------FHQNYDLYLTPTTAY 381 Query: 412 SAFPLGKEENNSGSMGH----------------IYNDV--------FTVAVNMAGLPAIS 447 A L E + +G IY+ FT N+ G PAIS Sbjct: 382 PAPKLTDELVSPELLGRMKEVTSLNSSFERQQLIYDAFLPSLALTPFTQQANLTGEPAIS 441 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +P L +PLG+Q RE L + ++ EK + HK Sbjct: 442 LPTHLTAAGLPLGIQFQAAKGREIDLLRIARLFEKHNLFQFLHK 485 >gi|107100170|ref|ZP_01364088.1| hypothetical protein PaerPA_01001192 [Pseudomonas aeruginosa PACS2] Length = 464 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 124/505 (24%), Positives = 203/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPGEYYEHLLAHIQRWEPHLNALYRFDPQRIREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPAPCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEALDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D++ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRSLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|17545308|ref|NP_518710.1| amidase [Ralstonia solanacearum GMI1000] gi|17427600|emb|CAD14119.1| probable amidase protein [Ralstonia solanacearum GMI1000] Length = 448 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 110/236 (46%), Gaps = 20/236 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ IKD F G T A S L ++T +L GAV+LG+ NM EFA Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAHQSAATSDATAVARLRAAGAVLLGRTNMSEFAF 132 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P D T GGS+ G + VAG + A++GTDTGGSIR PA+ Sbjct: 133 SGLGLNPHYG---TPRTPADGTRA--AGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G KPT R G + + SLD G + +V D ++ A+ D V L Sbjct: 188 FCALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSV-DCCAIVDAVLSGQALDTDAVPL- 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 G+ +G+ ++Y L T+ + + ++ L+ AGA IV P Sbjct: 246 ------------AGLRLGLTRDYVAADLDDTVATAFARAVAQLERAGAHIVRFEFP 289 >gi|295669065|ref|XP_002795081.1| acetamidase [Paracoccidioides brasiliensis Pb01] gi|226285774|gb|EEH41340.1| acetamidase [Paracoccidioides brasiliensis Pb01] Length = 545 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 24/306 (7%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 +V + DRL +++A ++ +YI+ ++ NA EV+ +A A E D+ G Sbjct: 59 SVEQLHDRLCRGELTATDVTLAYIKRATVAHQLTNAITEVMFDEALKQARELDRSFKETG 118 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNM 124 + L GIP+ +KD F KG T ++ F P E +T+ Q L GA+++ K N+ Sbjct: 119 KVKGPLHGIPVSLKDQFNVKGFDT-TLGYVGRSFSPAAEDATLVQILKSLGAIIIAKTNL 177 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + M E +G ++P S KFTPGGSSGG SA +A GTD GGSI Sbjct: 178 PQSIMWCETENPLFGLTVNPRNS-----KFTPGGSSGGESALLALHASILGFGTDIGGSI 232 Query: 185 RQPASFTGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGY 238 R P G G+KP+ R GI PS G +TR + + K +A Sbjct: 233 RIPQHMLGLYGLKPSSARLPYHGIPVSTEGQEHVPS--SIGPMTRDLSSLIYISKHLANS 290 Query: 239 D--ECDATCVNLPVPDYERALDQSIQG--MTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 D C LP + + Q IQ +T+G+ + + + P I++ ++ + L+ Sbjct: 291 QPWHLDPRCSPLP---WRNEVFQEIQSRPLTIGLIVDDGVVKVHPPIERALRELSAKLQA 347 Query: 295 AGAKIV 300 AG +IV Sbjct: 348 AGHEIV 353 >gi|162454277|ref|YP_001616644.1| amidase family protein [Sorangium cellulosum 'So ce 56'] gi|161164859|emb|CAN96164.1| amidase family protein [Sorangium cellulosum 'So ce 56'] Length = 503 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 153/310 (49%), Gaps = 22/310 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M +S+ + + +A L ++Y+ I S NA+ + A A A E D++ NG Sbjct: 1 MTISKVQLAYAMRRYTAEALTNAYLARIAQYESSYNAFTSM-NPNAIAQAREIDRKRRNG 59 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQA-----CSHILDG--FRPHYESTVTQKLWDNGAVM 118 A L GIP+ IK+ G+ + A S + G P S V +L GA++ Sbjct: 60 VALGPLAGIPVVIKESMDHVGLPSTAGWAPLSSQVAGGVDLFPIKNSVVVDRLIAAGAII 119 Query: 119 LGKLNMDEFAM-GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 LGK N+ F+ G+ +S+ GP + ++D T PG SS G++ AVAG + Sbjct: 120 LGKTNIPAFSDDGTRANSSWAGPT---YNAVDPT--LVPGASSSGTATAVAGNFAVLGLA 174 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL-DQAGIITRTVRDSAILLKAIA 236 +TGGSI+ PA+ VGIKPT+ G++ A S D G I RTVRD+A+++ +A Sbjct: 175 EETGGSIQNPAAAQSLVGIKPTFALVPTAGVVPLAASTRDVVGPIARTVRDAAMVMDILA 234 Query: 237 GYDECDATCV----NLPVPDYERALDQS-IQGMTVGI-PKEYRLDYLSPTIDKTWQQGIS 290 GY D +LPV Y L ++ + G +G+ +R LSP +++ I Sbjct: 235 GYSPEDPKTSLSNGHLPVGGYTSRLSKTALCGKRIGLYGSGWRNGSLSPETQALYEEAIE 294 Query: 291 WLKDAGAKIV 300 L+D GA +V Sbjct: 295 ELEDEGAIVV 304 >gi|39934476|ref|NP_946752.1| putative Glu-tRNA amidotransferase subunit A [Rhodopseudomonas palustris CGA009] gi|39648325|emb|CAE26845.1| putative Glu-tRNA amidotransferase, subunit A [Rhodopseudomonas palustris CGA009] Length = 484 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/486 (25%), Positives = 214/486 (44%), Gaps = 43/486 (8%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++V++ R +S VE+ + +E + + +NA++ V + + A A S+ R G Sbjct: 15 LSVAQLHAAYRGGRLSPVEVAKDLLLRLEQAQAAVNAFMPVDSSQTLAMARASEARWRAG 74 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDG-FRPHYESTVTQKLWDNGAVMLGKLNM 124 L+G+P+ IKD A + S G P ++ +L + G V LGK Sbjct: 75 TPIGPLDGVPVTIKDLVAVEDWPLLRGSESRVGEPSPTEDAASVARLREAGCVFLGKTTT 134 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + + E++ +G +P+ TPGGSSGG+ AA+A + ++GTD GSI Sbjct: 135 PDSGSRITTESAVHGVSTNPYDV-----SRTPGGSSGGAGAALALGVGPLALGTDGAGSI 189 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA++ G G+KP++GR P G + R+V D+A +L+A+A D DA Sbjct: 190 RIPAAWCGVFGLKPSFGRVPSAKFDIDMP-FSVIGPMARSVDDAAYMLEAMAKPDPNDAF 248 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT------IDKTWQQGISWLKDAGAK 298 + P L+++++ VG+ +D+ +PT I ++ L + GA Sbjct: 249 ALAAPF-----RLNEAMRSDAVGLRVGITMDFGNPTWPVEVEIADAVRRAADVLSNVGAD 303 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + + + LP + + A + LA ++ + R Sbjct: 304 VRPVDVRWPLAPLPTFNVFWEALYAGALA---------------LMPQAQRMRMDPALLA 348 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + R +R + +L A R L A G+DV++ P P +A + Sbjct: 349 IADR--------GARFSATDFLVALNGR-LAMTAAAHALFSGIDVLIGPVMPCTAPLVAN 399 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 G+ G+ FT NM G PA SVP + +P+G+Q++G ++ET+ V + Sbjct: 400 NAPPGGTEGNWDWCPFTYLWNMTGQPASSVPMGIDRHGIPIGVQVVGAMAQDETVLRVSR 459 Query: 479 IIEKEA 484 ++E A Sbjct: 460 VLESNA 465 >gi|264679368|ref|YP_003279275.1| amidase [Comamonas testosteroni CNB-2] gi|262209881|gb|ACY33979.1| Amidase [Comamonas testosteroni CNB-2] Length = 462 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 135/497 (27%), Positives = 213/497 (42%), Gaps = 83/497 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R SA L+ I A + S N + + +AR AA E+ L G+ Sbjct: 12 IREGRQSAANLMQMSIAAAQ-SPLCANVFSQTFFDEARWAAAETPSTT------PLAGLA 64 Query: 76 IGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD F T+G + A S +L D ++T +L GA ++G+ +M EFA Sbjct: 65 ISVKDLFDTQGARSAASSLVLQDAPLARTDATAVARLRAAGAAIIGRTHMVEFAFSGVGV 124 Query: 135 TSYYG------------PVISP-WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++G P ++P W + PGGSS G++ +VA A++G+DTG Sbjct: 125 NPHFGTPAALDARHPANPQLAPTWPAR------IPGGSSSGAAVSVASGAAWAALGSDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VG K T G G + +P+LD A ITR+VRD+ +L + +AG Sbjct: 179 GSIRIPAALNGLVGFKSTAGLVPTEGTVPLSPTLDTACAITRSVRDAVLLHEILAGRK-- 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V ER+L Q + +P+ D + P + +++ I+ L+ GA+I Sbjct: 237 --------VARDERSLSQ----WRLAVPRPLFFDQIEPAVRNAFERSIAKLQAGGAQIEW 284 Query: 302 ISLPHTQYALPAYYI--ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 I LP + I SP E+ Y R L+ K L + V Sbjct: 285 IDLPELEELDGVNTIGGFSPTES------YAWHRRHLQDPAKATL----------YDPRV 328 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK- 418 + RI G + ++ D R R I + E+ G D +L+PTTP +A + Sbjct: 329 RSRIERGASMSAADYLDLLAARKRWIAKM------ESAIAGYDALLSPTTPITAPTIASV 382 Query: 419 -EENNSGSMGHIYND--VFTV---------AVNMAGLPAISVPAALCE--KKMPLGLQLI 464 N + + D F V VNM A+S+P C ++P+GL + Sbjct: 383 APANGFDAAADLRRDEEFFRVNGLLLRNTSVVNMLDGCALSLP---CHNPNELPMGLMIW 439 Query: 465 GQPFREETLFSVGQIIE 481 ++ + ++ IE Sbjct: 440 HAALHDDGILNISAGIE 456 >gi|34557494|ref|NP_907309.1| amidase [Wolinella succinogenes DSM 1740] gi|34483211|emb|CAE10209.1| PUTATIVE UREA AMIDOLYASE [Wolinella succinogenes] Length = 421 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 116/418 (27%), Positives = 188/418 (44%), Gaps = 48/418 (11%) Query: 71 LEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP IKD GI T AC + P + V Q+L + GA+ +GK N+D+FA Sbjct: 43 LFGIPFAIKDNIDLAGIPTTAACPKY--AYVPERSAFVVQRLIEAGAIPVGKSNLDQFAT 100 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG + S+D ++ GGSS GS+ +VA + + S+GTDT GS R PA+ Sbjct: 101 GLVGTRSPYGACRN---SIDP--EYISGGSSSGSAVSVALEMVSFSLGTDTAGSGRVPAA 155 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 +G+KPT G S LG++ SLD I + + ++L+ YDE D P Sbjct: 156 LNAILGLKPTKGWLSTLGVVPACRSLDCVSIFAKEGEEVRMILEVAGVYDESD------P 209 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQ 308 ER++ + +P + + ++L + ++ +++ I + GA++ E+ + Sbjct: 210 YAREERSVAPLALNPKIAVPLKAQREFLGDSEYERLFEEAIERFRALGARVEEVDISPLI 269 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A Y E RY ++ L + + +LE+ TR I G K Sbjct: 270 LAAKLLY-----EGPWVSERYVAIQEFLENQPEALLEV---TRGIIQGGASKS------- 314 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN----SG 424 + Y +A KR+ + QG D L PT P + + + E + + Sbjct: 315 -------AADYFKAEYRLMECKREAQKRL-QGFDFSLLPTIPRP-YTIKEVEADPVRLNS 365 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +GH +T +N+ L A ++PA + +P G+ L +PF E L G+ K Sbjct: 366 HLGH-----YTNFMNLLDLAAYAIPAGFRQDGIPFGITLFSEPFSESRLIEAGEYFLK 418 >gi|291003294|ref|ZP_06561267.1| amidase [Saccharopolyspora erythraea NRRL 2338] Length = 487 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 127/509 (24%), Positives = 223/509 (43%), Gaps = 68/509 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEES 59 +S+L + E +R +++S E++ +Y+ I+ N +NA + +K A + Sbjct: 14 ISDLVLLDAVELSWLIRRREVSCAEVMRTYLDHIDRFNPLVNAIVSRADDEKLLEQAAKR 73 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D+ + G+ + + G PI +KD +G T S IL G + +++ D GA++ Sbjct: 74 DEELARGEYKGWMHGFPIAVKDLADAEGFPTSKGSPILAGQTADDDEIAVRRMRDAGAIV 133 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF----LCAA 174 +GK N+ EF +GS +G ++P F P S+GGSS A + Sbjct: 134 IGKTNVPEFGLGSHTFNRVFGTTVNP---------FDPSRSAGGSSGGAAAALSLRMLPV 184 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + G+D GS+R PA+F +G++P++GR + G +S PS+ AG + RTVRD A+LL Sbjct: 185 ADGSDFMGSLRNPAAFCHVLGLRPSFGRVPKPGFLS-EPSV--AGPMARTVRDLAMLLST 241 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPTIDKTWQQGISWL 292 +AG D V + L+ + G+ +G ++ YL P + + Sbjct: 242 MAGPDPRAPLGVEQDPAVFAEPLEHRVDGLRIGWLGDFG-GYLPTEPGVLAVCASALGTF 300 Query: 293 KDAGAKI--VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY--E 348 ++ G + VE LP Q A + L R+ + G+ + E++ E Sbjct: 301 EEIGCVVEPVERELPVEQ-----------AWETFLLWRH-------WMTGQTLHELHADE 342 Query: 349 NTRSIGFGQ---EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD----FTEAFEQGV 401 +TR+ + EV+ + +G +++ L RD A Sbjct: 343 STRASLKPEAVFEVEGYLRMGVREIAA--------------ALTGRDEWHAHVAALFDDY 388 Query: 402 DVILTPTT---PTSAFPLGKEENNSGSMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKM 457 D ++ PT P A E +M + + TVA ++G P I++PA + Sbjct: 389 DFLVAPTAQIFPFDAALRWPSEVGGRTMDTYHRWMETVAPWTLSGHPVINLPAGFGAADL 448 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGY 486 P+G+QLIG E L + E+ + + Sbjct: 449 PMGVQLIGPNHGELDLLRLAHAYERASDW 477 >gi|311106347|ref|YP_003979200.1| amidase [Achromobacter xylosoxidans A8] gi|310761036|gb|ADP16485.1| amidase family protein 9 [Achromobacter xylosoxidans A8] Length = 451 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 116/419 (27%), Positives = 179/419 (42%), Gaps = 59/419 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 LEG+ + KD F T G H L P +TV ++L D GA+ LG L M E A G Sbjct: 63 LEGVALAHKDAFET-GAHAPGRGRPLRDDAPGPMATVLRRLQDQGALNLGALAMAEHACG 121 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ E + +++P +D GGSS G + AVA L AS+GTDT GS+R PA+ Sbjct: 122 ATAENPHGPALVNP---LDPAAAV--GGSSSGCAVAVAAGLVPASLGTDTAGSVRMPAAT 176 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT G G+ + AP+LD G+I R D+A + A+ LP Sbjct: 177 CGLVGLKPTQGVIPADGVAALAPTLDTVGVIGRDALDAACVYAAL------------LPS 224 Query: 251 PDYERALDQSIQGM--TVGIPKEYRLDYLSPTIDKTWQQGISW------LKDAGAKIVEI 302 AL G+ + P+ +R+ T G + L+D+ A+I Sbjct: 225 ATVSPALPTDAAGIEQELSRPRRWRVASTLATAGARPDVGAAMACFEQRLRDS-ARIAAQ 283 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG----QE 358 + P I+ AEA++ LA VR +++ + T++I Sbjct: 284 AGPDLDRLNRLAQIVLHAEAAATLA--GSVR-------RELASLAPATQAIALPGWAMPA 334 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD--FTEAFEQGVDVILTPTTPTSAFPL 416 + +R + LS + + Y L+ D T QGV TT + AF Sbjct: 335 IWYRHALSQIALSRAAFVATY--------LVDADLLLTPCLPQGVPDRSAVTTSSPAF-- 384 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E + + H ++ N GLPA+ +P + P+ +Q +G P + L + Sbjct: 385 ---EPRARAALHRHHAYL----NYLGLPALVLPVGIDALGRPVCVQAVGAPGSDALLLA 436 >gi|167581028|ref|ZP_02373902.1| amidase [Burkholderia thailandensis TXDOH] Length = 458 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 112/429 (26%), Positives = 182/429 (42%), Gaps = 55/429 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAAADAIAVARLKRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 134 SGLGLNPHYGTPRSPYRRGVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G KPT R + G + + +LD G I +V A++ + +AG + Sbjct: 194 FCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P A + ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 244 -PHVSAA--RPLEGVRLGVLTNYVTDGVDAHVAASLDAALKHLEAAGAIVSDARF----- 295 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRI 363 +P + ++ RY G +E Y R + + V RI Sbjct: 296 --------APLDTLPDINRY----------GFSSIEAYAWHRPLVARHRDAYDPRVLARI 337 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + + YL R + + Q D ++ PT P + + + E + Sbjct: 338 LKGEPASA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDD 392 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQI 479 + V A N A+S+P C + P+GL L P R++ L ++GQ Sbjct: 393 DAFARTNALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHRDDALLAIGQA 449 Query: 480 IEKEAGYFR 488 +E R Sbjct: 450 VEAVLATIR 458 >gi|218893338|ref|YP_002442207.1| amidase [Pseudomonas aeruginosa LESB58] gi|218773566|emb|CAW29380.1| probable amidase [Pseudomonas aeruginosa LESB58] Length = 464 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 124/505 (24%), Positives = 203/505 (40%), Gaps = 96/505 (19%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +++S E + + I+ +NA Q+ R A + +R G + L+G+P+ Sbjct: 19 RELSPGEYYEHLLAHIQRWEPHLNALYRFDPQRIREQAAAATERWRKGQPKGPLDGLPVT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT G S ++ +L + GA++L K + +F M SS +S+ Sbjct: 79 IKELIATAGEPIPLGSAATALQPAPCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSF 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW ++T SS G++AA A +GTD GGS+R PA + G VG K Sbjct: 139 HGVTRNPWNLANNTGG-----SSSGAAAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 P+ GR I P AG +TR + D +L++ +A D DAT + D+ Sbjct: 194 PSLGR------IPIDPYYTGRCAGPMTRCMDDCLLLMRYLAQPDARDATSLPPEALDWS- 246 Query: 256 ALDQSIQGMTVGIPKE--------------------------YRLDYLSPTIDKTWQQGI 289 A S++G+ VG+ + +L + P +D++ G+ Sbjct: 247 AEPLSVRGLRVGLQLDPGCGMQPDAEIRAAIEAAARLFEEHGAQLRIVEPLMDRSLLDGL 306 Query: 290 S--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + W ++++ + LP Y+ + AE + ++ D VR Sbjct: 307 NDFWRARLWSELLLLDETRRARVLP--YVHAWAEGGARVSGVDAVR-------------- 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++R R F E +D++LTP Sbjct: 351 ------GFNQTF------------------------EMRRRAARLFGE-----IDLLLTP 375 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T AFP + + VFTV NM PA+S+ MP+GLQL+ Sbjct: 376 TNQVEAFPADWASPLNDPQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPR 435 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 F + L +G+ E G H W Sbjct: 436 FADTWLLRIGKTYEGWRGPI--HGW 458 >gi|13472781|ref|NP_104348.1| amidase [Mesorhizobium loti MAFF303099] gi|14023528|dbj|BAB50134.1| amidotransferase, subunit A [Mesorhizobium loti MAFF303099] Length = 472 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 122/234 (52%), Gaps = 26/234 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA----AAEESDKRIINGDARDL 71 +R K +S E+V +++ IE N +NA +V+ + R A+ +D R + + L Sbjct: 19 IRRKKLSVREVVTAFLDRIETVNPLVNA---IVSLRERGDILREADAADARQASETGK-L 74 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+PI IKD +T G+ T S I F P + +++ + GA+++GK N+ EF +GS Sbjct: 75 FGLPIAIKDLASTTGLRTSFGSPIFADFVPQEDDFFVERIRNAGAIIIGKTNVPEFGLGS 134 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + + +GP ++ + T GGSSGG++ A+A + + G+D GGS+R PA + Sbjct: 135 NTYNNVFGPTLNAF-----DPALTAGGSSGGAAVALALDMVPVADGSDFGGSLRNPAGWN 189 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLD----QAGI---ITRTVRDSAILLKAIAGY 238 G +P+ G++ P L+ Q GI + R V D A+LL AGY Sbjct: 190 NVYGFRPSQ------GLVPAGPDLEVFHAQMGIEGPMGRNVADMALLLDVQAGY 237 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE--ENNSGSMGHIYNDVFTVAV- 438 A +RT R F++ D+I PT F +G +G Y+ V+ Sbjct: 361 ASVVRTSWHRMLLSIFDR-FDLIALPTAQVFPFEVGMHWPSEVAGRPMDSYHRWMQVSAF 419 Query: 439 -NMAGLPAISVPAALCEKKMPLGLQLIGQP 467 + G PA++VP +K P+G+QLIG+P Sbjct: 420 ATLGGCPAVNVPVGFDDKGRPMGMQLIGRP 449 >gi|225436194|ref|XP_002270353.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 612 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM V E + +++K I++ EL ++ ++ N + A + + A A+E+D+ Sbjct: 137 DIAFMTVLELGELIKTKQITSEELTQIFLHRLKRYNLVLEAVVTYTEELAYKQAKEADEM 196 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD + T S E++V +KL GAV++ K Sbjct: 197 LARGIYLGPLHGIPYGLKDIISVPQYKTTWGSKTFKDQVLDIEASVYKKLKSAGAVLVAK 256 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++++ G SSG +++ AG + A IG++T Sbjct: 257 LATGSLAY---DDIWFGGRTRNPW----NIEEYSTGSSSGPAASTSAGMVPFA-IGSETC 308 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++PT+G R G++S + SLD+ G R+ D I+L AI G D Sbjct: 309 GSITYPAARCGVTALRPTFGAVGRTGVMSISESLDKIGPFCRSAADCTIILDAILGKDPD 368 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + ++ + D I +TVG YL D + + L+ G K+V Sbjct: 369 DPSSKDISLDD---PFSVDITNLTVG--------YL----DDAEMEVVRILESKGVKMVP 413 Query: 302 ISLPHT 307 L +T Sbjct: 414 FKLNYT 419 >gi|115398526|ref|XP_001214852.1| predicted protein [Aspergillus terreus NIH2624] gi|114191735|gb|EAU33435.1| predicted protein [Aspergillus terreus NIH2624] Length = 546 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 133/521 (25%), Positives = 212/521 (40%), Gaps = 100/521 (19%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR---DL 71 +L+S SA ++V +YI+ ++ NA EVV A A A E D R+ + L Sbjct: 67 QLKSGKYSAEQVVQAYIRRAVVAHQLTNAITEVVFDDALAQARELD-RVFKETGQLKGPL 125 Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMG 130 GIPI +KD F+ KG+ + ++ F P E + + Q L + GAV+L K N+ + M Sbjct: 126 HGIPITVKDQFSIKGVDS-TLGYVGRSFSPATEDAVIVQMLKEMGAVILLKTNLPQSIMW 184 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + + +G ++P R+ D FTPGGS+GG A +A +GTD GGS+R P Sbjct: 185 AETDNPLWGRTVNP-RNPD----FTPGGSTGGEGALLALHGSLFGLGTDIGGSVRIPQCI 239 Query: 191 TGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGYD--ECD 242 G G KP+ R LG+ PS G + R + + + +A E D Sbjct: 240 NGLYGFKPSSSRYPYLGVPVSTEGQEHVPS--SVGPMARDLSSLCYVSRLVANAKPWEFD 297 Query: 243 ATCVNLPVPDYERALDQSIQG--MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 C LP + Q +Q + +G+ + + + P I++ + S L+ G +++ Sbjct: 298 PKCTPLP---WNEVAFQEVQSRPLVIGLILDDGVVKVHPPIERALRDLASKLEKQGHEVI 354 Query: 301 --EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 + S H L Y + DG LR G M + +++ Sbjct: 355 TWDTSDHHECIKLMDQYYTA-----------DGCEDILRDVGAAGEPMIPHVQAL----- 398 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-------QGVDVILTPTTPT 411 V I Y Y + K + ++R + + + VDV+L+PTTP Sbjct: 399 VDRAKAISVY---------EYWQLNKGKVALQRKYLNKWNATRSPSGKPVDVLLSPTTPH 449 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPA--------------------- 450 A P +G +T N+ PA++ P Sbjct: 450 PAIP----HRALRWVG------YTKIWNLLDYPAVTFPVDEVREDVDRLPAGGYQPRNEL 499 Query: 451 -----ALCEKKM----PLGLQLIGQPFREETLFSVGQIIEK 482 +L E K P+ LQ+IG+ EE + IIEK Sbjct: 500 DAWNWSLYEPKTMNGHPINLQVIGKKLNEEKVLGAATIIEK 540 >gi|302189377|ref|ZP_07266050.1| Amidase [Pseudomonas syringae pv. syringae 642] Length = 597 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 42/297 (14%) Query: 32 QAIENSNSQMNAYIEV-----VAQKARAA----AEESDKRIINGDARDLEGIPIGIKDCF 82 + I +N + NA++ + + ++AR A + D+R G A L GIP GIKD F Sbjct: 76 EEIYGNNGKYNAFVRLEHFSALLEQARFADKWLTSQDDER---GPAPPLCGIPFGIKDSF 132 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 A +G+ ++ +H G ++T +L GA+++G E + + + + G Sbjct: 133 AIQGLESKNGTHAFSGNLALRDATCVARLRAQGALIIGHTICSELSTHTVGQ--FAGNAW 190 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P R TPGGSS GS A LCAA++G +T GSI PA+ G IKP+ G Sbjct: 191 DPTR--------TPGGSSQGSGVAPVARLCAAALGEETAGSIIIPAAANGASAIKPSLGL 242 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPDYERALDQS- 260 S G++ D G + R++RD++++L IAG D E D ++ P + + + Sbjct: 243 VSGAGVMPLRSGWDVVGPMARSIRDASLILSIIAGPDGENDPQSLSAPSIGEQLCITPTP 302 Query: 261 ----IQGMTVGIPKEYRLDYLSP-------TIDKTWQQGISWLKDA----GAKIVEI 302 ++G+T+GIP+ D++S + D+ + KD GAK+V+ Sbjct: 303 GSLPLEGLTIGIPQT---DWMSSPGHPPAQSYDEDYSAAFVRFKDQLAALGAKVVDF 356 >gi|315641162|ref|ZP_07896240.1| amidase [Enterococcus italicus DSM 15952] gi|315483086|gb|EFU73604.1| amidase [Enterococcus italicus DSM 15952] Length = 502 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 129/506 (25%), Positives = 221/506 (43%), Gaps = 74/506 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L++K IS EL+ +++I N Q+NA + A +++D + + G+P Sbjct: 22 LKTKKISHQELLAECMKSIGAQNEQLNALVHYDQTAYVAQLQQTDWQNL-----PFAGLP 76 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +K KG A S + + S +L G + G+ N EF + + Sbjct: 77 IPLKILGHVKKGWSASASSILFKDEKASMTSHFVHRLETLGFIPFGQTNAPEFGFKNVTD 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG +PW + ++PGGSSGG++AAVA + + + +D GGSIR PASF+G + Sbjct: 137 PQLYGVSKNPWHT-----AYSPGGSSGGAAAAVASGMFSIATASDGGGSIRIPASFSGLI 191 Query: 195 GIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 G+KP+ G R + +SFA +TR++RD+ L + D+ + + Sbjct: 192 GLKPSRGVMPVGPGDYRSWQGASVSFA--------MTRSMRDTETLFYLLR--DKENQSP 241 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 P +++ + +G + + + +S + ++ I L G ++ E+S Sbjct: 242 YQAPWAEWQHHQAAPHKKRKIGFFIDSPIGNRVSEDAKRVMKRTIDLLVQQGHEVEEVSY 301 Query: 305 PHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 P AL AYY ++ A+ ++ + + G + KD+ M + G Q K R+ Sbjct: 302 PIDGKALMQAYYRMNGADTAAMFESIEQ-QMGRPLTMKDMELM-----TWGIYQSGK-RM 354 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA---------- 413 YV S +D + EAF Q DV+L+P+ T+A Sbjct: 355 RASQYVASLHVWDQAAVS------------MEAFFQDYDVLLSPSATTTAPKLATDLQSD 402 Query: 414 -----------FPLGKEENNSGSM--GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 P + E +M ++ +T N+ G PAIS+P + E +PLG Sbjct: 403 AIREQLHAIQTLPFSQTEEVVYNMFEKSLHLTPYTQLANLTGQPAISLPMGVAENGLPLG 462 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGY 486 +QL RE+ LF +G +E E + Sbjct: 463 VQLQSAKGREDLLFQLGYELENEGAF 488 >gi|113869334|ref|YP_727823.1| amidase [Ralstonia eutropha H16] gi|113528110|emb|CAJ94455.1| Amidase [Ralstonia eutropha H16] Length = 473 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 133/491 (27%), Positives = 220/491 (44%), Gaps = 55/491 (11%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLE 72 D +R ++IS E+ S + I+ N ++NA EV+A++A A+A+ +D+++ G + L Sbjct: 17 DAVRRREISCREVTASVLARIDALNPRLNALPEVLAEEALASADAADRQVAEGAELGPLH 76 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P+ IK G T L ++ V L GA+++G+ N ++ Sbjct: 77 GVPVTIKINVDQAGHATTNGVIPLKHNIAREDAPVVANLRSAGAIIVGRSNTATYSSRWF 136 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + +G ++PW + TPGGSSGG+++AVA + A + G D GGSIR PA G Sbjct: 137 TDNGLHGRTLNPWDA-----DITPGGSSGGAASAVASGMGALAHGNDIGGSIRYPAYACG 191 Query: 193 TVGIKPTYGRC-----SRLGIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDAT-- 244 VG++PT GR S S P L G + R++ D + A+A YD D Sbjct: 192 VVGLRPTTGRVPAYNPSATAERSITPQLMSVQGPLARSIADLRLGYHAMARYDGRDPAWV 251 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 V L +P + ++ G+P + P + WL+ AG + E L Sbjct: 252 PVPLELPLPPGPIRVALFRRCPGVP-------VDPAVSAALDSAGQWLQQAGYAVEEARL 304 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P A + ++ ++ N+ G+ G D M ++ R++ G + R Sbjct: 305 PDFMEAAALWRTLTVDDSRRNII------AGVDQHGDD--AMRQSQRNMLDGMQETDR-- 354 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PT--SAFPLGKE 419 +L A R I R+++ F Q ++L P + P+ A E Sbjct: 355 ------------DGFLDALARRQAIARNWS-LFMQTYPLVLMPVSWQRPSVQDADTRTPE 401 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 EN + + +A M G+P +SVP + +P+G+QL+ FRE+ L GQ Sbjct: 402 ENRA----LLDAQSPMLATAMLGMPGLSVPTGMA-GGVPVGVQLMAWRFREDLLLRAGQA 456 Query: 480 IEKEAGYFRPH 490 IE +A F P+ Sbjct: 457 IE-DAARFTPY 466 >gi|170693818|ref|ZP_02884975.1| allophanate hydrolase [Burkholderia graminis C4D1M] gi|170141236|gb|EDT09407.1| allophanate hydrolase [Burkholderia graminis C4D1M] Length = 601 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 120/433 (27%), Positives = 191/433 (44%), Gaps = 56/433 (12%) Query: 67 DARDLE-----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 D +D+E GIP IKD GI T A + P +T+ +L GAV LGK Sbjct: 60 DTQDVESLPLYGIPFAIKDNIDLAGIPTTAACPAFS-YTPAESATLVAQLIALGAVPLGK 118 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP-GGSSGGSSAAVAGFLCAASIGTDT 180 N+D+FA G + S YG + +S P GGSS GS+ AVA + + ++GTDT Sbjct: 119 TNLDQFATGLNGTRSPYG------KCRNSVHPEYPSGGSSAGSALAVALGVASFALGTDT 172 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS R PA VG+K T G S G++ +LD T T R+++ LL A D Sbjct: 173 AGSGRVPAGLNNLVGLKATKGLLSTAGVVPACRTLDCVTYFTATAREASELLALTAHADP 232 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL----SPTIDKTWQQGISWLKDAG 296 DA P + RA ++ G+P +L++ SP + + + + L+ AG Sbjct: 233 RDAYSRRNPQWNDARAFG-NLTRFRFGVPS--KLEFAGCAESPAL---FAKARAMLEAAG 286 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIG 354 + VEI +P ++NL Y G R V G+ I E + Sbjct: 287 GEAVEIDF-------------APFVEAANLL-YQGPWVAERYTVAGELIEANEEAVLPV- 331 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHY-LRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 ++ + + + + Y L+A K+ +A + VD +LTPT P Sbjct: 332 ----IRDVLAKAPGATAVELFRAQYRLQALKVT-------CDAALESVDFVLTPTYPR-- 378 Query: 414 FPLGKEENNSGSMG-HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 P+ E +G + +T +N+ A++ P A + +P G+ + G+ F ++ Sbjct: 379 -PVTLAELERDPIGPNSLLGYYTNFMNLLDYAAVATPTAFMKNGLPWGVTVFGRAFTDQY 437 Query: 473 LFSVGQIIEKEAG 485 L SV +++ +G Sbjct: 438 LLSVADTLQRMSG 450 >gi|190894440|ref|YP_001984733.1| putative amidase [Rhizobium etli CIAT 652] gi|190700101|gb|ACE94183.1| putative amidase protein [Rhizobium etli CIAT 652] Length = 603 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 130/474 (27%), Positives = 202/474 (42%), Gaps = 55/474 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S +ELV+ I S+ ++ RAAA E R ++ L GIP +KD Sbjct: 19 LSPLELVEEIIARCSASDDPAIFITTTPEEELRAAARELVARAPEPNSLPLWGIPFAVKD 78 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 G+ T A + P ++ +L GA+++GK N+D+FA G + S +G Sbjct: 79 NIDVTGLPTTAACPAF-AYHPQADAATVARLRAAGALVIGKTNLDQFATGLNGTRSPHG- 136 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +P D + GGSS GS+ AVA L + S+GTDT GS R PA+F VGIKPT Sbjct: 137 --APRSVFDR--NYVSGGSSSGSAVAVAAGLASFSLGTDTAGSGRVPAAFNNLVGIKPTP 192 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-----ATCVNLPVPDYER 255 G +G++ S+D + TV D + + + GYD D AT +LP Sbjct: 193 GLVPNVGVVPACRSVDVVTVFAATVGDGLAIRRIMEGYDARDPFSRQATPASLPA----- 247 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQYALPAY 314 + G+ G +E+ Y + ++ + I + GA IV P Q A Y Sbjct: 248 --TRPRIGVLDGAEREF---YGNRQVEALYDAAIERARSLGAVIVPFDYAPFRQAAELLY 302 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 AE R V+ L G D F V+ + ++ Sbjct: 303 NGPWVAE------RLAAVKEFLATNGGD------------FDPTVR------AIIEGAKA 338 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 YD+ + R R T+A + VD ++ PT+PT+ EE + + + N F Sbjct: 339 YDAVDAFEGRYRLEALRQKTKAEWEKVDFLMLPTSPTT---YSVEEMQADPI--VKNSHF 393 Query: 435 TVAVNMAGL---PAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 N A L AI++PA ++ +P G+ L+G F ++ L + + A Sbjct: 394 GRYTNFANLLDCAAIAIPAGFDADRHLPAGVMLVGPAFTDDALAPFADALHRAA 447 >gi|163758246|ref|ZP_02165334.1| Amidase [Hoeflea phototrophica DFL-43] gi|162284535|gb|EDQ34818.1| Amidase [Hoeflea phototrophica DFL-43] Length = 461 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 125/454 (27%), Positives = 202/454 (44%), Gaps = 49/454 (10%) Query: 50 QKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT 108 + A +AEE+ +R + L+G+PIG+KD TKG+ T S G P+ + + Sbjct: 4 EGAVVSAEEATRRWQSDTPMGPLDGLPIGVKDLQDTKGLLTTHGSIRARGHVPNDDMPMV 63 Query: 109 QKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA 168 +L GA++L K N+ E G ++ +G +P+ + + G S + AA Sbjct: 64 ARLRAAGAIILAKTNVPEVGAGGNSCNPVWGATGNPFDA--NLIAGGSSGGSAAALAANL 121 Query: 169 GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDS 228 LC G+DTGGS+R PA+ G VG +P+ G + + G + RT+ D Sbjct: 122 LPLCT---GSDTGGSLRMPAALCGIVGYRPSVGVIAHPTRPLGWSGISVLGPMARTMDDL 178 Query: 229 AILLKAIAGYDECDATCVNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 ++L G+D D V+ VPD AL S++ + VG +++ + PTI +T++ Sbjct: 179 TLMLGVCQGHDWDDPLSVS-SVPDRFEALPPVSLKDLRVGFSEDFGGAPVEPTIRQTFRA 237 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD--GVRYGLRV-EGKDIL 344 + L+ PH + + + ++ R + G +G V E D Sbjct: 238 RLDLLR-----------PHVKECRLVDLNLGDMDRCFDVLRAESFGAAFGAGVQEDPD-- 284 Query: 345 EMYENTRSIGFGQEVKHRIMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 GFG + + +G T L+ R + A +T I R F A + VDV Sbjct: 285 ---------GFGPHINENVALGQTMSLADRGW------AHNEQTRILRRF-NALMREVDV 328 Query: 404 ILTPTTPTSAFPLGKEENN--SGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPL 459 I+ PT+P S FP + + G IY + +++G PAI++P MP Sbjct: 329 IVLPTSPVSPFPWTQSHPSRIDGQDMDIYYRWLALCYRGSLSGGPAITLPCGRDAFGMPF 388 Query: 460 GLQLIGQPFREETLFSVGQIIE----KEAGYFRP 489 GLQ++G +E L S + IE EA RP Sbjct: 389 GLQMLGAVRGDEQLLSAAKAIEGLFAAEAETARP 422 >gi|119473329|ref|XP_001258569.1| amidase family protein [Neosartorya fischeri NRRL 181] gi|119406721|gb|EAW16672.1| amidase family protein [Neosartorya fischeri NRRL 181] Length = 533 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 147/513 (28%), Positives = 216/513 (42%), Gaps = 51/513 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + + ++ L S ++ ++L+ Y+ I ++S +NA ++ A A AE D Sbjct: 8 QLEEATIDDLQEYLFSVKLTTLQLLHCYLDRISQTDSYLNAILQH-NPDAFAIAEALDVE 66 Query: 63 IINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G R L GIP +KD ATK + T A S L G ++ V ++L + GA++LG Sbjct: 67 RAQGKMRGPLHGIPFIVKDNIATKDRMETTAGSWALLGSVVPRDAFVVRRLREAGALLLG 126 Query: 121 KLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K + E+A M S+N + Y RS + PGGSS GS AV L ++GT+ Sbjct: 127 KAALSEWADMRSNNYSEGYSARGGQCRSAYNL-TVNPGGSSSGSGVAVGANLVPFALGTE 185 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ PA VGIKPT G SR G+I + D G+ +TVRD+ +L AI G D Sbjct: 186 TDGSVINPAQRNAVVGIKPTVGLTSRDGVIPESLHQDTVGVFGKTVRDATYILDAIHGVD 245 Query: 240 ECD----ATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D A P+ Y + L S++G G+P E P + + +K Sbjct: 246 TRDNYTLAQSGRTPLGGYTQYLSDRSSLKGAVFGLPWESVWRLGDPDQVSQLMELLDLIK 305 Query: 294 DAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLARYDGVRYGLRVEGKDI 343 DAGA I+ PH + I+SP N + Y V+ K Sbjct: 306 DAGATIINGTEFPHYR------QIVSPDGWDWDYGSRRGYPNESEYTYVKVDFYNNIKSY 359 Query: 344 LEMYENT--RSI---------GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 L NT RS+ FG E G Y + S + K D Sbjct: 360 LSELNNTNMRSLEDFVEYNKANFGAE-------GGYPGVHPAFGSGQ-DGFEASLATKGD 411 Query: 393 FTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAVNMAGLPAISVP 449 E + Q ++ T K N + + DV +A AG P +++P Sbjct: 412 MNETYWQALEFCRRTTREEGIDAALKHGNRTLDGLLVPPDVAQSIQIAA-QAGYPVVTIP 470 Query: 450 AALCEKK-MPLGLQLIGQPFREETLFSVGQIIE 481 A + E+ MP GL ++ F E TL IE Sbjct: 471 AGVNEESGMPYGLAILQTAFAESTLIKYASAIE 503 >gi|262369312|ref|ZP_06062640.1| allophanate hydrolase [Acinetobacter johnsonii SH046] gi|262315380|gb|EEY96419.1| allophanate hydrolase [Acinetobacter johnsonii SH046] Length = 612 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 122/469 (26%), Positives = 205/469 (43%), Gaps = 49/469 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMN-AYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 ++DI +L+D Q + ++ ++ A E+++Q+ +++D+ L GIP Sbjct: 23 NQDIHLEDLIDYVAQLPQPDHAWISIATTEILSQQIEVLKQKADQATDLSKELPLYGIPF 82 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD G T A L T+ + L + GA+++GK N+D+FA G S Sbjct: 83 AVKDNIDVAGFVTTAACKALTTVATQDAETI-RLLKNAGAIVVGKTNLDQFATGLVGTRS 141 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G V + + + D + G SSG +S G L ++GTDT GS R PA+F +G+ Sbjct: 142 PFGAVSNTFNA----DYVSGGSSSGSASVVARG-LVPFALGTDTAGSGRVPAAFNNIIGL 196 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPT GR S G++ SLD I TV D+ + + + YD D+ P + A Sbjct: 197 KPTKGRFSNRGLLPACKSLDCISIFALTVTDADTIAQMVEHYDALDSYSRQHP----KTA 252 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + IP+ +L++ K +Q + LK GA+I EI Sbjct: 253 PVKLSTKPHFAIPQ--KLEFFGDDQAKYAFQLAVEQLKVLGAEITEIDF----------- 299 Query: 316 IISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 A LA Y G R + E+ + F V+ I G + Sbjct: 300 -----SAFEQLAAQLYQGSWVAERTAA--VAELLAQQPEV-FDPTVRAIIQKGHDFSAID 351 Query: 374 CYDSHYLR---ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 Y++ YL+ +RKI+ + + D ++ PT+PT L + E + S+ + Sbjct: 352 AYNAEYLKQDLSRKIQDTLAQ---------FDALIVPTSPT-IHTLAEMEQSPISLNSEF 401 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +T N+A L A+++PA +P G+ LI + ++ L G+I Sbjct: 402 G-TYTNFTNLADLSALALPAGFRTDGLPFGISLIAPAWYDQALIEFGKI 449 >gi|145590879|ref|YP_001152881.1| amidase [Pyrobaculum arsenaticum DSM 13514] gi|145282647|gb|ABP50229.1| Amidase [Pyrobaculum arsenaticum DSM 13514] Length = 401 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 110/378 (29%), Positives = 175/378 (46%), Gaps = 59/378 (15%) Query: 107 VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAA 166 V ++L GAV++GK NM E A+G++N +YGP +P T SSGGS+ A Sbjct: 79 VVRRLIAEGAVVIGKTNMHELALGATNINPHYGPTRNPHDPSRITGG-----SSGGSAGA 133 Query: 167 VAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 VA + +GTDTGGS+R PA+ G VG KP YG+ G++ A SLD G ITRTV Sbjct: 134 VAVGVADLGVGTDTGGSVRIPAALCGVVGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVE 193 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 + +L A AG+ + +P +R + G+ + +DK + Sbjct: 194 ELVHILSA-AGWGPAE-------LPQMKRFRFAVLIGVAEN----------TKHVDKAFW 235 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + +S L+ G E+ + +Y A I +EA++N Y +R G+D+ + Sbjct: 236 KAVSVLESIGGIRDEVFIDGGRYG-AARAAILLSEAAANYYHY--LRSAAEHMGRDVAAL 292 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 + Y+ A++++ R F F++ DV+ T Sbjct: 293 LSA---------------------GAALPAVAYVTAKRVKEEATRFFESLFKK-YDVVAT 330 Query: 407 PTTPTSAFPLGKEENNSGSMGHI--YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 PTT T A + +E G + Y ++F N+ G PA+SVPA +P+GLQ+ Sbjct: 331 PTTATEALAI-EEAGKLAVRGRLLAYTELF----NLTGHPALSVPAP--ASGLPVGLQIA 383 Query: 465 GQPFREETLFSVGQIIEK 482 + E+ L S+ + E+ Sbjct: 384 AR--DEDVLLSIAKAYEE 399 >gi|289669375|ref|ZP_06490450.1| amidase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 549 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 145/485 (29%), Positives = 221/485 (45%), Gaps = 33/485 (6%) Query: 15 RLRSKDISAVELVDSYIQ---AIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 R+ S S+++L +Y+Q +I+ + +NA IE+ +A A A D G R Sbjct: 47 RMASGQSSSLQLTRAYLQRIASIDRAGPTLNAVIEL-NPRAEADARALDAERSAGRVRGP 105 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ +KD + A S L FRP ++ + Q+L GAV+LGK N+ E+A Sbjct: 106 LHGIPVLLKDNIDALPMVNSAGSLALAEFRPSRDAFLVQRLRAAGAVILGKANLSEWASF 165 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S ++S P GSS G+ AA+A L A IGT+T GSI PAS Sbjct: 166 RSTQSSSGWSGRGGLTRNPYALDRNPCGSSAGTGAAIAASLAAVGIGTETDGSITCPASV 225 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--ATCVNL 248 G VG+KPT G SR GII + S D AG +TR+V D+A +L+AIA D D Sbjct: 226 NGLVGLKPTVGLVSRDGIIPISSSQDTAGPMTRSVADAAAVLQAIAAPDPQDPATAKAPA 285 Query: 249 PVPDYERALDQ-SIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 +Y L S++G +G+ + R D P I + + L+ AGA +VE +L Sbjct: 286 ASANYLAHLKPYSLRGARLGLLRNPLRED---PAIAAALDRAVQTLRAAGATVVETALVS 342 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN--TRSIG-FGQEVKHRI 363 A ++ E + L Y + + ++ N R + FGQE+ + Sbjct: 343 DGKWDAAEQMVLLVEFKAGLNAYLQNHHAPVATLQQLIAFNRNHAQREMPYFGQELFEQA 402 Query: 364 MIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQG--VDVILTPTTPTSAF-PLGKE 419 + D+ YL AR + L + +A + +D ++ PTT + LGK Sbjct: 403 QAAPGL-----DDAGYLSARANAKRLAGPEGIDAALKADRLDALIVPTTGAAWITTLGK- 456 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 G + A +AG P++SVP + +PLGL +G + E L + Sbjct: 457 -------GDTFPGAGYGAAAVAGYPSLSVPMGQTQ-GLPLGLLFMGTAWSEPRLIELAYA 508 Query: 480 IEKEA 484 E+ + Sbjct: 509 YEQRS 513 >gi|262372554|ref|ZP_06065833.1| allophanate hydrolase [Acinetobacter junii SH205] gi|262312579|gb|EEY93664.1| allophanate hydrolase [Acinetobacter junii SH205] Length = 608 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/414 (28%), Positives = 181/414 (43%), Gaps = 48/414 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD G T A L+ TV + L GA+++GK N+D+FA G Sbjct: 74 LYGVPFAVKDNIDVAGFVTTAACKALNTIAVQDAETV-RLLKQAGAIVVGKTNLDQFATG 132 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG V + + S K+ GGSS GS++ VA ++GTDT GS R PA+F Sbjct: 133 LVGTRSPYGAVANTFNS-----KYVSGGSSSGSASVVARGFVPFALGTDTAGSGRVPAAF 187 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP- 249 VG+KPT GR S G++ SLD + TV D+ ++ + YD D+ P Sbjct: 188 NNIVGLKPTKGRFSNRGLLPACKSLDCISVFALTVVDADLVANVLEAYDPLDSYSRKHPK 247 Query: 250 -VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 VP + + + IP++ + +K +QQ I L+ A+I +I + Sbjct: 248 NVPAHFSS------KLKFSIPEKLNF-FGDEQAEKAFQQTIQLLESLNAEITKIDFSDFE 300 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGT 367 + ++ L Y G R KD+L+ + F V I G Sbjct: 301 ------------QLAAQL--YQGSWVAERTAAVKDLLKNNPD----AFDPTVLEIIKNGE 342 Query: 368 YVLSSRCYDSHYLR---ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 + Y++ YL+ ARKI+ + DF D ++ PT PT ++N Sbjct: 343 KYSAVDAYNAEYLKQDLARKIQQRLA-DF--------DALIVPTAPTIYTIEQLQQNPIE 393 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 H+ +T N+A L A+++PA +P G+ LI + + L G+ Sbjct: 394 YNAHL--GTYTNFTNLADLSALALPAGFRADHLPFGITLIAPAWHDAALVHFGK 445 >gi|116619993|ref|YP_822149.1| allophanate hydrolase [Candidatus Solibacter usitatus Ellin6076] gi|116223155|gb|ABJ81864.1| Amidase [Candidatus Solibacter usitatus Ellin6076] Length = 594 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 120/425 (28%), Positives = 188/425 (44%), Gaps = 56/425 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD G+ T A + P + + V L + GA+ +GK NMD+FA G Sbjct: 70 LYGVPFAVKDNIDVAGLPTTAGCPAYS-YSPGHSARVVHSLMEAGAIPIGKTNMDQFATG 128 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +G S + S ++ GGSS GS+ AVA L + S+GTDT GS R PA+F Sbjct: 129 LVGTRSPHGACSSVFNS-----RYISGGSSSGSAVAVASGLASFSLGTDTAGSGRVPAAF 183 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KPT G S G++ +LD I D+ + A G+D D P Sbjct: 184 NGLVGLKPTRGVLSTKGVVPACRTLDCVSIFAENADDAHTIWLAARGFDADD------PF 237 Query: 251 PDYERALDQSIQGMT----VGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIVEISLP 305 R + S + G+P +L++ T + + ++ L+ G + VEI Sbjct: 238 SRAARPGEDSAPWLAGTFRFGVPPADQLEFFGDEGAATLYAEAVARLERVGGRKVEIDFS 297 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + A Y P A RY +R + EM R I G Sbjct: 298 TFRAAAELLY-AGPWVAE----RYAAIREFIEAHAS---EMNPVVRGIIEGARRYS---- 345 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAFPLGK 418 ++ +D+ Y R R++R + + E +DV++ PTT T ++ P+ Sbjct: 346 -----AADAFDAEY-RLRELRRATETQWEE-----MDVLVLPTTGTIYTHDAVASEPVRM 394 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 N +G+ +T VN+ L A+++PA +P G+ LIG+ F +E L S+ + Sbjct: 395 NTN----LGY-----YTNFVNLLDLAALAIPAGRRPDGLPFGISLIGRAFSDEALLSLAK 445 Query: 479 IIEKE 483 +E E Sbjct: 446 RLEGE 450 >gi|29477220|gb|AAH48279.1| FAAH2 protein [Homo sapiens] Length = 511 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 121/505 (23%), Positives = 207/505 (40%), Gaps = 60/505 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R + + +++V +YI I++ N +N ++ ++A A D+++ D LE Sbjct: 39 IRQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLEN 98 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +K+ F +G+ + ++TV L GA+ LG N E Sbjct: 99 KWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSEL 158 Query: 128 AMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG RS + D + GGSSGG +A +G+D GGSIR Sbjct: 159 CMWYESSNKIYG------RSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRM 212 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KP+ G G A + G + R D A +LK +AG Sbjct: 213 PAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAG----- 267 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLD-----YLSPTIDK----TWQQGISWL 292 P +R LD + + K Y ++ +L +D+ T ++ + L Sbjct: 268 --------PGIKRLKLDTKVHLKDL---KFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHL 316 Query: 293 KD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + + L +Y+ + + A+ V L GK + ++E + Sbjct: 317 ETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDL-LGDHGKHVSPLWELIK 375 Query: 352 SIGFGQEVKHRIMIGTYVLSS--RCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPT 408 G V IG +L R + Y + + + ++++ + G D V L P+ Sbjct: 376 WC-LGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDML--GDDGVFLYPS 432 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT A + + +N +T + GLP P L K +PLG+Q++ PF Sbjct: 433 HPTVA------PKHHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAGPF 486 Query: 469 REETLFSVGQIIEKE-AGYFRPHKW 492 + +V Q +EK G+ P K+ Sbjct: 487 NDHLTLAVAQYLEKTFGGWVCPGKF 511 >gi|254502299|ref|ZP_05114450.1| Amidase, putative [Labrenzia alexandrii DFL-11] gi|222438370|gb|EEE45049.1| Amidase, putative [Labrenzia alexandrii DFL-11] Length = 511 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/465 (24%), Positives = 192/465 (41%), Gaps = 46/465 (9%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN-GDARDLEGIPIGIKDCFATKGIHT 89 + + N +NA ++ + +A A D + N G L G+P+ IK K T Sbjct: 71 VDRMRTVNGHLNAVVDDMGDEALERARALDAHMENSGPVGPLHGVPVTIKVNVDQKDKAT 130 Query: 90 QACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 ++ + L + GA+++G+ N EF+ ++ YG SPW Sbjct: 131 TNGVKAFSDVIAPDDAPFVKNLTNAGAIVIGRTNTPEFSFRATTTNDLYGRTFSPW---- 186 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC------ 203 D + GGSSGG+S AV + + G D GGS+R P++ TG V +KP GR Sbjct: 187 -NDWASSGGSSGGASTAVMSGMGPIAHGNDIGGSLRFPSAATGAVTVKPGLGRTPAWNPS 245 Query: 204 --SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 + G++ A + G+I R VRD + +K+ YD D V PVP LDQ Sbjct: 246 QSAERGLL--AQLMSVQGVICREVRDVRLAMKSAIAYDPHDPWQV--PVPFEGSVLDQPT 301 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 + +G K P + K L DAG ++VEI P Y E Sbjct: 302 R---IGFTKNTYQFEAHPAVTKALDVARDCLVDAGYEVVEIETPDIGEIGETGYRALMGE 358 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 N+ D +R E + + Y G+E +L SH++R Sbjct: 359 I--NVLMLDDIRTHGSAEINRMFDEYFELFPPFEGEE----------LLRQMARRSHFIR 406 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDVFTVAVNM 440 + + ++LTP P+ + ++ E G M + +++ A+N Sbjct: 407 QWNL-----------LLENYPIVLTPFLPSPTYAWNRDAEGKDGIMEVLGCGIWSFAMNY 455 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 GLPA + + + +P+ +Q++G+ FRE+ + + +E G Sbjct: 456 MGLPA-GIVSPIMHDGLPVAVQMVGRRFREDIILDALEAVETRVG 499 >gi|126739117|ref|ZP_01754811.1| amidase [Roseobacter sp. SK209-2-6] gi|126719734|gb|EBA16442.1| amidase [Roseobacter sp. SK209-2-6] Length = 469 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 120/499 (24%), Positives = 209/499 (41%), Gaps = 53/499 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRII 64 +++ ++ +LR ++A EL+ + IE N +NA + + A++ A E+D+R Sbjct: 5 YLSAADLLRQLREGSLTAEELMRDTLSRIEAVNPTLNAIVALRPAEELMEEAREADRRRE 64 Query: 65 NGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G + L G+P+ +KD GI + S + F P + +L GA+++GK N Sbjct: 65 SGHHPEALHGLPMAVKDLANVAGIPSTQGSPLFQDFVPKQDELFVSRLRAAGAILIGKTN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF +GS YG +P+ + S SSGG++ A++ + A + G+D GS Sbjct: 125 SPEFGLGSHTFNPVYGATRNPFDASRSCGG-----SSGGAAVALSAGMLALADGSDMMGS 179 Query: 184 IRQPASFTGTVGIKPTYG--RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 +R PA + G +PT+G G + F L G + R+ D A+LL +AG D Sbjct: 180 LRNPAGWNNVYGFRPTWGWVPAEPQGDL-FLHQLSTLGPMGRSPEDLALLLDVMAGPDPR 238 Query: 242 DATC----VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + P+P R + P E + L Q + ++D G Sbjct: 239 QPLARGAELCAPLPPTRRMRIGWLGNWGGSFPMEAGILDLC-------QNALEVVRDLGH 291 Query: 298 KIVEISLPH-TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF- 355 + E+ P + A+ + +S L D R L+ ++E R + Sbjct: 292 VVEELPPPFPAEDIWEAWTCLRSFAVASGLRSLDSNRASLKATA-----VWELERGLSLT 346 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G +++ A IR+ +R E F+ D ++ PT F Sbjct: 347 GPQIQ--------------------AASDIRSDWQRRVGELFDS-FDALVLPTAQCWPFS 385 Query: 416 LGKEENN--SGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 + E SG+ Y+ V V++ GLP + PA + +P+GLQ+ G + Sbjct: 386 VESEYPTAISGTQMDTYHRWMQVVTPVSLLGLPCLGAPAGFGTQGLPMGLQIFGPHGSDR 445 Query: 472 TLFSVGQIIEKEAGYFRPH 490 L S+GQ + + + H Sbjct: 446 MLLSLGQAYHQATEFPQKH 464 >gi|327298715|ref|XP_003234051.1| hypothetical protein TERG_05918 [Trichophyton rubrum CBS 118892] gi|326464229|gb|EGD89682.1| hypothetical protein TERG_05918 [Trichophyton rubrum CBS 118892] Length = 626 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 137/530 (25%), Positives = 220/530 (41%), Gaps = 82/530 (15%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNS----QMNAYIEVVAQKARAAAE 57 S + V + D S +++ + + + I + A+ E AAAE Sbjct: 125 SRARYYTVQDYHDMYVSGELTPTAVAKAILPLIRRDTTPPGEHSAAWFETRVDLVLAAAE 184 Query: 58 ESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-------VTQ 109 S R G R L +GIP +KD + G T C L+ + S+ + Sbjct: 185 ASTLRYKQGCPRGLMDGIPTAVKDEYDIDGYKT--CLGSLNDYTSDPASSGGSIASWCVR 242 Query: 110 KLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAG 169 KL + GAV+LGKL+M EF + +S YG ++P+ K+ GGSS G++ AV+ Sbjct: 243 KLEEAGAVVLGKLSMHEFGLDTSGSNPNYGTPLNPYNP-----KYYTGGSSSGTAYAVSV 297 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 L ++G+D GGSIR P+SF G+KPT+ R S + + + G I ++ + Sbjct: 298 GLLPFALGSDGGGSIRIPSSFCSVYGLKPTHSRISHHPGPNHSNTCAVNGPIAADLQSLS 357 Query: 230 ILLKAIAGYDEC-DATCVNLPVPDYERALDQSIQGMT-VGIPKEYRLDYLSPTIDKTWQQ 287 L + I C T LPV R S G +G+P+ + +P I + + Sbjct: 358 ALYRIIG----CPPPTSPFLPV--SPRLAPCSPNGTKYLGVPEAW-FSQATPAIQRLCRS 410 Query: 288 GISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 IS L D +V I +P+ A+ + +A++ L + Sbjct: 411 AISTLADKHNYTVVPIQIPYLVEGQIAHAVTILTDAATLLPDTSNL-------------T 457 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVI 404 N +G G+E + YL A+K+R L+ + + +++ G+ ++ Sbjct: 458 APNKILLGLGRETPA---------------TDYLLAQKLRRLLMQHLSWLWKEYPGM-IV 501 Query: 405 LTPTTPTSAFPL--GKEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALC------- 453 +TPTT + +P+ KE S G + F N GLPAI+VPA Sbjct: 502 VTPTTSCAGWPIRDQKELKYGISDGDQTLKTMNFIWLANFTGLPAINVPAGFVVPEGAKN 561 Query: 454 ---------EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR--PHKW 492 E K+P+GL G+ E+ L G +E G R P W Sbjct: 562 EGEIADENTEGKIPIGLMGTGEWGSEDFLMRWGLDVENVVGDRRSKPPVW 611 >gi|325285393|ref|YP_004261183.1| Amidase [Cellulophaga lytica DSM 7489] gi|324320847|gb|ADY28312.1| Amidase [Cellulophaga lytica DSM 7489] Length = 567 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 117/445 (26%), Positives = 194/445 (43%), Gaps = 65/445 (14%) Query: 48 VAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV 107 V ++AR E + + G+PI +KD TK + T A + L ++ + Sbjct: 150 VVKQARKLDELKNANNEPASKHPIYGMPILLKDNINTKNMVTTAGAIALKNNSTD-DAFI 208 Query: 108 TQKLWDNGAVMLGKLNMDEFA--MGSSNETSYY---GPVISPW-RSMDSTDKFTPGGSSG 161 ++L +NGA++LGK+N+ E+A + + Y G ++P+ R++ F GGSS Sbjct: 209 VKQLKENGALILGKVNLSEWAYFLCTGCPVGYSAVGGQTLNPYGRTV-----FETGGSSA 263 Query: 162 GSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGII 221 GS AVA A++GT+T GSI P+S VG+KPT G SR GI+ + +LD G + Sbjct: 264 GSGTAVAANYAVAAVGTETSGSILSPSSQNSVVGLKPTIGLLSRTGIVPISSTLDTPGPM 323 Query: 222 TRTVRDSAILLKAIAGYDECDATCVN-----LPVPDYERALDQSIQGMTVGIPKEYRLDY 276 + V D+AILL A+ G D D+ V L P +D S++G G+ K Sbjct: 324 AKNVGDAAILLDAMKGKDAADSKSVEKHLGVLSAP----LIDNSLKGKRFGVIKNLLES- 378 Query: 277 LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL 336 D ++ I LK+ G+ IVEI+ P + ++ + I + +L Y + Sbjct: 379 -----DSIYKITIDKLKEQGSVIVEITPP--EVSMSGFLSILNIDMKHDLPTY------I 425 Query: 337 RVEGKDILEMYENTRSIGF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 + + K+ L + + ++ F ++ RI G + D+ + + Sbjct: 426 KNQTKNKLPINDIKSAVAFNAKDSVVRIPYGQALFRGILADTTTVEELAV-------IVS 478 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG------LPAISVP 449 EQ G+ N H N + ++ AG PAI+VP Sbjct: 479 NLEQN----------------GRRYFNEAMDAHNLNAILSINNYHAGYAAVAKYPAITVP 522 Query: 450 AALCEKKMPLGLQLIGQPFREETLF 474 + P+ L I + F+E L Sbjct: 523 MGYKKTGEPISLTFIAKQFKEAELL 547 >gi|330501703|ref|YP_004378572.1| allophanate hydrolase [Pseudomonas mendocina NK-01] gi|328915989|gb|AEB56820.1| allophanate hydrolase [Pseudomonas mendocina NK-01] Length = 604 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 128/480 (26%), Positives = 203/480 (42%), Gaps = 83/480 (17%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 R LR+ D + + L S +++NA ++ + A + K L Sbjct: 36 RLELRADDSAWIALA---------SEAELNAQLDALTIALEGAGGDLSKL-------PLY 79 Query: 73 GIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS 131 G+P IKD G T AC + ++TV +L GA+++GK N+D+FA G Sbjct: 80 GVPFAIKDNIDAAGWPTTAACPEF--AYVAKADATVVARLRAAGAILIGKTNLDQFATGL 137 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF----LCAASIGTDTGGSIRQP 187 S +G V + F P SGGSS+ A L ++GTDT GS R P Sbjct: 138 VGTRSPHGAV---------PNSFNPAYVSGGSSSGSASVVARGLVPFALGTDTAGSGRVP 188 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA-TCV 246 A F VG+KPT G G++ +LD + TV D+ + GYD DA +C Sbjct: 189 AGFNNIVGLKPTKGWLPNTGLVPACRTLDCISVFALTVSDALAVANIAGGYDAADAYSCT 248 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRL------DYLSPTIDK-TWQQGISWLKDAGAKI 299 N P+ + VG+P + RL ++ + ++ ++ + L++ GA++ Sbjct: 249 N---PNSAK----------VGMPTKPRLAVPANPEFFGDSQNQAVYEAALGTLRELGAEL 295 Query: 300 VEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 VEI P Q A YY P A +A VEG + + R I Sbjct: 296 VEIDFAPFQQLAEQLYY--GPWVAERTVA----------VEGVNPEHINPVVRGI----- 338 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + G + Y + Y+RA + R +A G D ++ PT+PT L + Sbjct: 339 ----VENGQKYSACDAYKAEYIRAE-----LSRVINDAL-AGFDALVVPTSPTIRT-LAE 387 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E+ + +T N+A L A++VPA L +P G+ L+ + ++ L + GQ Sbjct: 388 MEDEPVLFNSQFG-TYTNFTNLADLAALAVPAGLRADGLPAGITLLAPAWHDQALAAFGQ 446 >gi|148251923|ref|YP_001236508.1| putative amidase (amiD) [Bradyrhizobium sp. BTAi1] gi|146404096|gb|ABQ32602.1| putative amidase (amiD) [Bradyrhizobium sp. BTAi1] Length = 448 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/422 (27%), Positives = 186/422 (44%), Gaps = 52/422 (12%) Query: 49 AQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT 108 A +AR + E + ++ L GIP+ +KD AT + T S I P ++ V Sbjct: 43 AIEARLKSFEYLPKDVSAKNGPLGGIPVAVKDIIATSDMPTSNGSPIYRDHVPAADAWVV 102 Query: 109 QKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA 168 +L + GA + GK EFA + GP ++PW TPGGSS GS+AAVA Sbjct: 103 ARLRNLGATIFGKTVSTEFAW------RHPGPTVNPWNP-----AHTPGGSSSGSAAAVA 151 Query: 169 GFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDS 228 L ++GT T GS+ +PA+F G VG KP++G R+G+ +PSLD G R V D Sbjct: 152 AGLVPLALGTQTLGSVIRPAAFNGVVGFKPSFGAIPRVGVHPLSPSLDHVGFFARRVDDV 211 Query: 229 AILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMT---VGIPKEYRLDYLSPTIDKTW 285 A+ L +AG + D P+P + + ++ + + + + + + P + Sbjct: 212 ALALSLLAGRSDDDPH--GRPLPGFTVDIAHGLRPLASPRLAVVRFAKWELAEPEQKAVF 269 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE 345 + + L+ AGA + EI+LP + + A +D + + E I Sbjct: 270 EAAVERLRSAGAVVEEIALP-----------------ALDAAHWDAINTIMLSEATTIF- 311 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQ-GVDV 403 + F V ++ +V S R + YL A+ + +R A E G D Sbjct: 312 ---SDLIARFPDRVSD--VMKAHVASGRSKTAMEYLTAKAAQA--ERQHALATELGGFDA 364 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +LT AF G+ + G + + G PA+S+PA +PLG+Q+ Sbjct: 365 VLT----LPAF--GEAPHGLDWTG---DAEYCAPWTFVGAPAVSLPAGFGRHGLPLGVQI 415 Query: 464 IG 465 G Sbjct: 416 AG 417 >gi|134099942|ref|YP_001105603.1| amidase [Saccharopolyspora erythraea NRRL 2338] gi|291003065|ref|ZP_06561038.1| amidase [Saccharopolyspora erythraea NRRL 2338] gi|133912565|emb|CAM02678.1| glutamyl-tRNA amidotransferase subunit A [Saccharopolyspora erythraea NRRL 2338] Length = 474 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 87/253 (34%), Positives = 139/253 (54%), Gaps = 15/253 (5%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 R++ +S VE+V+S + ++ + A + ARAAA ES++R G+ ++G+P Sbjct: 23 RTRTLSPVEVVESVLDRVQACEPLLCATYALDPDGARAAARESERRWGRGEPDGPVDGVP 82 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IK+ AT+G+ + + ++ +L ++GAV+LGK M ++ M SS + Sbjct: 83 VTIKENIATRGVPVPLGTAATERVPAAEDAPAAARLRESGAVILGKTTMPDYGMLSSGAS 142 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S++ +PW + D+ TPGGSS G+ AA A +GTD GGSIR PA + G VG Sbjct: 143 SFHHLARNPW----NPDR-TPGGSSAGAGAAAAAGYGPLHVGTDIGGSIRLPAGWCGIVG 197 Query: 196 IKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 +KP++GR I P + + G +TRTV D+A+L +A DE D T LP D + Sbjct: 198 LKPSFGR-----IPVDPPYIGRVVGPMTRTVADTALLASVLAAPDERDHTA--LPPADID 250 Query: 255 -RALDQSIQGMTV 266 ALD +G+ + Sbjct: 251 WAALDGDARGLRI 263 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 46/91 (50%) Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 +G+D +L+P P AFP + S + + FTV NM+G PA+SV +P Sbjct: 373 RGLDFLLSPVAPIPAFPAEQAYPTGDSRLPMEHIAFTVPFNMSGQPAVSVNCGYTPDGLP 432 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +GLQ+ G+ F + + + + E+ RP Sbjct: 433 IGLQIAGRRFDDVGVLRLASLHERIRPPQRP 463 >gi|70730023|ref|YP_259762.1| amidase family protein [Pseudomonas fluorescens Pf-5] gi|68344322|gb|AAY91928.1| amidase family protein [Pseudomonas fluorescens Pf-5] Length = 487 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 122/494 (24%), Positives = 213/494 (43%), Gaps = 76/494 (15%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 + V+++ + + IE Q+NA E + AA+ S R G L+GIPI +K Sbjct: 28 FTPVDVLQAVLAQIERHEPQLNALCERQDPASLRAAQASTARWAAGQPMGRLDGIPILVK 87 Query: 80 DCFATKGIHTQACSHILDGFRPHY--ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 D +G T++ S L RP +S++ +L + GA+ + K + E ++ Sbjct: 88 DNNDVQGWQTRSGSRALAN-RPAMTRDSSLVARLREAGAIFIAKTTLPELGSTPLTDSPL 146 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW GGSSGGS+A VA A+ G D GSIR P+SF G VG K Sbjct: 147 TGITRNPWNL-----ALHAGGSSGGSTAGVAAGYAPAATGNDAAGSIRTPSSFCGVVGFK 201 Query: 198 PTYGRCSRLGIISFAPSLDQAGI-----ITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 P++ G++S PS+D G+ I R VRD A+L++ +A ++ + D Sbjct: 202 PSH------GLVSACPSIDPGGMAAEGPIARHVRDIALLMELMAVHEPGEPFAWPHGPRD 255 Query: 253 YERALDQSIQGMTVGIPKEY-RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + ++ + G+ + + ++ P I L++AGA +V ++ P Sbjct: 256 FLSTIEDGVAGLRIAFSADLGYAAHVDPQIAAACLNAARLLQEAGATLV-LASPDIGNPA 314 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 P Y P E + +A+ + +D R ++G ++ Sbjct: 315 PNYLRAWPVEVACAVAQ--------EIPAED-------------------RHLVGDFLQQ 347 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQ-------------GVDVILTPTTPTSAFPLGK 418 ++ +RAR++ L D+ A E+ D++LTP F + + Sbjct: 348 AQ------VRARQLNAL---DYACAVEERHQVAHKLHAFLGEYDLLLTPAAVVEPFAVER 398 Query: 419 --EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + ++ T N + PA+S+P AL E +P+GLQ++ + R+ + Sbjct: 399 LLPPDWPEQISAMWQPT-TFPFNFSRQPALSLPCALSEAGLPIGLQIVARFGRDALVLRA 457 Query: 477 GQIIEKE--AGYFR 488 + +EK G FR Sbjct: 458 ARALEKRLPEGVFR 471 >gi|254820136|ref|ZP_05225137.1| amidase [Mycobacterium intracellulare ATCC 13950] Length = 462 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 142/478 (29%), Positives = 222/478 (46%), Gaps = 57/478 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +++A EL++ Y++ I +SQ+ Y V+A KAR A + R+ G+ L G+P Sbjct: 17 LADGELTAPELLEVYLERIAQLDSQLRCYRVVLADKARYEAAVAQDRLDAGERLPLLGVP 76 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYES--TVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 + IKD G T S G RP S V ++L GAV++GK N+ E M Sbjct: 77 VAIKDDVDVAGEVTTFGSG---GHRPAVSSDAEVVRRLRAAGAVIVGKTNVPELMMLPYT 133 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E+ +G +PW + TPGGSSGGS+AAVA L ++G+D GGSIR PA++ G Sbjct: 134 ESLTFGATRNPW-----DPRRTPGGSSGGSAAAVAAGLAPLALGSDGGGSIRIPATWCGV 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KP R S L G I RTV D+A+ L A + V P ++ Sbjct: 189 FGLKPQRDRVSLEPHDDAWYGLSVNGPIARTVIDAAVFLDA--------TSTVPGPEGEF 240 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A +S + + + + +P + ++ ++ + +AGA + ++ A P Sbjct: 241 VSAATRSPGRLRIALSTKVP----TPLPVRVGKRELAAVDEAGALLRDLGH-DVITADPE 295 Query: 314 YYIISPAEA--SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 Y PA A ++ L RY LR D + R ++ +G++ S Sbjct: 296 Y----PASAILTNYLPRY------LRGICDDADALAHPER---LEPRTRNMARLGSF-FS 341 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI-- 429 R +S LRA + + + +A VDV++TP T T +G + G++ + Sbjct: 342 DRWMES--LRAAEGAVVSR---IQAIFDDVDVVVTPGTATGPSRIGAYQRR-GAVSTLLR 395 Query: 430 ------YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 Y V+ N+ G PA VP L MP+ +QL+G+P+ E TL S+ IE Sbjct: 396 VGQYVPYQQVW----NLTGQPAAVVPWDLDADGMPMSVQLVGRPYDEATLLSLSAQIE 449 >gi|24379642|ref|NP_721597.1| amidase [Streptococcus mutans UA159] gi|24377595|gb|AAN58903.1|AE014958_7 putative amidase [Streptococcus mutans UA159] Length = 480 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 135/522 (25%), Positives = 230/522 (44%), Gaps = 82/522 (15%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 + F + + ++ KD+S ELV I+ E N +NA +V+Q+ A +E+ +R Sbjct: 1 MQFPDATAMANAVKQKDVSPRELVKWTIEKAEKHNPSLNA---IVSQRYERALQEARERD 57 Query: 64 INGDARDLEGIPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G + G+P+ +KD + G + + S +L + + + L G ++LG+ Sbjct: 58 FTG--KPFAGVPLFLKDLGQEQAGELSTSGSRLLANYHASHSDNYVKSLEALGFIILGRT 115 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N EF + +++S +G V P D + G S G ++ +G + A+ +D GG Sbjct: 116 NTPEFGFKNISDSSLHGQVNLP----DDVSRNAGGSSGGAAALVSSGVVPLAA-ASDGGG 170 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISF----APSLDQAGIITRTVRDSAILLKAIAGY 238 SIR P SF G +G+KPT GR +G SF S+ A +T+TVRD+ LL + Sbjct: 171 SIRIPTSFNGLIGLKPTRGRIP-VGPTSFRGWQGASVQFA--LTKTVRDTKRLLYYLQTC 227 Query: 239 D-ECDATCVNLPVPDYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 E L E+ L + ++ + P R +S + QQ + +L+ AG Sbjct: 228 QMESPFVLPTLSKESLEQPLKKKLKIAVLFDSPIASR---VSRSAISAVQQTVKFLEAAG 284 Query: 297 AKIVEISLPHTQY-ALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILE-----MYEN 349 ++ E+S P A+ +YYI++ E + A +DG+ L R D +E +Y++ Sbjct: 285 HRVEEVSQPLNGIEAMKSYYIMNSVETA---AMFDGLAASLGRPLTLDDMEVMSWALYQS 341 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 GQ++ + +Y +D + R F + D+ILTPTT Sbjct: 342 ------GQKIPAK----SYSKILNQWDQYSHR------------MAVFHEKYDLILTPTT 379 Query: 410 PTSA-----FPLGKEENNSGSMGHIYN--------------------DVFTVAVNMAGLP 444 A F L N + HI + FT N+ G P Sbjct: 380 AEVAPKHDQFQLSSTLEN--KLKHITDFDRNCQQELIWEMFADSLAWTPFTQQANLTGQP 437 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 AIS+P ++ + LG+QL RE+ L ++ Q E+++ + Sbjct: 438 AISLPLYRDKQGLSLGVQLTAAKGREDLLLALAQSFEEQSLF 479 >gi|283781698|ref|YP_003372453.1| amidase [Pirellula staleyi DSM 6068] gi|283440151|gb|ADB18593.1| Amidase [Pirellula staleyi DSM 6068] Length = 462 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 124/469 (26%), Positives = 208/469 (44%), Gaps = 60/469 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + E+ LR+++++AVEL + + I+ + ++ A+ V ++A +AA D + Sbjct: 12 IEEAARMLRAQELTAVELTEQCLANIDQFDERVKAWTIVDRERALSAARALDSEAARFEF 71 Query: 69 RD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 R L GIPIGIKD +G+ T A + ++ V ++L G VMLGK +F Sbjct: 72 RSPLHGIPIGIKDIIDVEGLATGAGFPLRKSHVALQDAPVVKQLRAAGCVMLGKTVTTQF 131 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A T +PW S SS GS+AAVA +C A+IGT TGGSI +P Sbjct: 132 ACFDPAATR------NPWDLQRSPGG-----SSSGSAAAVASEMCLAAIGTQTGGSILRP 180 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA------GYDEC 241 ASF G G KP +G G++ + LD G + RTV D + KAIA D Sbjct: 181 ASFCGVAGYKPGFGCVDMRGVVPVSYHLDHVGPLARTVSDLYEVWKAIAMRVPPVSIDFL 240 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +N D+ +D M + + + L ++ + +T + I L+ + ++ Sbjct: 241 QVEYLNRQFDDW---VDSGPMTMVLRVAEGPILAGVASDVQQTTESAIRKLQSS-MRMAP 296 Query: 302 ISLPHTQYALPAYY-IISPAEASS----NLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++LP +PA + I EA++ N AR+ Y L ++E T ++ + Sbjct: 297 LTLPPIIDEVPAMHRRIMAVEAAAVHRENYARFP--EYFLPTISA-LIEEGLATSAVDYA 353 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + H+ R R + + + ++ + + P+T T+A Sbjct: 354 AALAHQ--------------------RATRQQMMQVLVTSGDEPISCFVLPSTVTTA--- 390 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 E ++GS + + + GLPAI++P +P GLQ +G Sbjct: 391 -TEPTSTGSA------LLNLPWSYVGLPAITIPCGTSAAGLPCGLQFVG 432 >gi|297584290|ref|YP_003700070.1| amidase [Bacillus selenitireducens MLS10] gi|297142747|gb|ADH99504.1| Amidase [Bacillus selenitireducens MLS10] Length = 500 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 138/520 (26%), Positives = 219/520 (42%), Gaps = 79/520 (15%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESD 60 SE M E LR +++ E+VD I ++ +NA + + + R AE+ Sbjct: 4 SEYAHMDAVELVTHLRENEVTVNEVVDKAYARINGLHAALNAVVSLRQPHQIREDAEQ-- 61 Query: 61 KRIINGDARDLEGIPIGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 NG G+P +KD A KG + S+ L R + T ++ G + + Sbjct: 62 ----NGP---FAGVPFLLKDMGQALKGERLTSGSYALRNNRSITSAEYTNRILRAGFIPM 114 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G N+ EF++ + E YGP +PW D T TPGGSSGGS+AAVA + + D Sbjct: 115 GHTNVPEFSLLAVTEPMMYGPTKNPW---DLT--VTPGGSSGGSAAAVASGMVPVAGAND 169 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 GGSIR PAS+ G VG+KPT GR G Q G++T+TVRD+A++L I+G Sbjct: 170 GGGSIRIPASYCGLVGLKPTRGRTPVGPGTGRNWQGASQEGVLTKTVRDTALVLDQISGP 229 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-----IDKTWQQGI---- 289 +E A P++ I+ + + R+ + + +D T ++ + Sbjct: 230 EETQA----FRAPEFNGRYHDVIR---TPLKRALRIAVCTDSPIGGQVDTTIRESVWNAA 282 Query: 290 SWLKDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 WL+ G E+SLP +A+ +Y + E ++ + + G G V+ +++ + Sbjct: 283 KWLEKEGHHAEEVSLPVDGHAVAKSYMTMYFGETAATITKI-GRERGQAVQRQEVEPVTW 341 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 IG + +V R +D + F Q D+ +TP Sbjct: 342 LLHLIG------QTVTAEEFVTRLRFWDEAAIEMAN------------FHQSYDLFMTPV 383 Query: 409 TPTSAFPLG------KEE------------------NNSGSMGH--IYNDVFTVAVNMAG 442 T +G KEE + M H + FT N+ G Sbjct: 384 TAMGPAKIGELAISKKEEKLIEWVSRLRAQKLLTRFDLIDEMIHDSLERTPFTQLANLTG 443 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 PAIS+P A E +P G+Q RE+ L + E+ Sbjct: 444 QPAISLPIARSEGGLPAGIQFTAPRGREDLLLQTAAMFEQ 483 >gi|167619106|ref|ZP_02387737.1| amidase [Burkholderia thailandensis Bt4] Length = 550 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 112/422 (26%), Positives = 181/422 (42%), Gaps = 55/422 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + +L GAV++G+ NM EFA Sbjct: 166 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAAADAIAVARLKRAGAVLVGRTNMSEFAF 225 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 226 SGLGLNPHYGTPRSPYRRGVPGDERIAGGSSSGAAASVAHGMAAVALATDTGGSIRIPAA 285 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G KPT R + G + + +LD G I +V A++ + +AG + P Sbjct: 286 FCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLE---------P 336 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + R L +G+ +G+ Y D + + + + L+ AGA + + Sbjct: 337 LVSAARPL----EGVRLGVLTNYVTDGVDAHVAASLDAALKHLEAAGAIVSDARF----- 387 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRI 363 +P + ++ RY G +E Y R + + V RI Sbjct: 388 --------APLDTLPDINRY----------GFSSIEAYAWHRPLVARHRDAYDPRVLARI 429 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + + YL R + + Q D ++ PT P + + + E + Sbjct: 430 LKGEPASA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDD 484 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQI 479 + V A N A+S+P C + P+GL L P R++ L ++GQ Sbjct: 485 DAFARTNALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHRDDALLAIGQA 541 Query: 480 IE 481 +E Sbjct: 542 VE 543 >gi|73541082|ref|YP_295602.1| amidase [Ralstonia eutropha JMP134] gi|72118495|gb|AAZ60758.1| Amidase [Ralstonia eutropha JMP134] Length = 451 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 84/292 (28%), Positives = 130/292 (44%), Gaps = 17/292 (5%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 RLR IS VEL+++ A +Q + A L G+ Sbjct: 11 RLREGAISRVELIEAAADAASQPRAQAVFLHSTFDTALQTARAADAAGRAGKALHPLAGL 70 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ +KD F G T+A S + P ++TV +L GA ++G+ NM EFA Sbjct: 71 PVSVKDLFDVAGEVTRAASAVRHDAPPATADATVVARLRHAGAALVGRTNMTEFAFSGVG 130 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ++G ++P S D + PGGSS G++ +VA L A++G+DTGGSIR PA+ G Sbjct: 131 INPHFGTPVNPA-SADGIARI-PGGSSSGAAVSVALGLAVAALGSDTGGSIRIPAALCGL 188 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G KPT R G + +LD A + RTV D ++ IA + Sbjct: 189 TGFKPTTRRVPLTGAFPLSYTLDTACAMARTVNDCLLVDSVIAD--------------NA 234 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + + IP++ LD L P + + + + + L AG ++ LP Sbjct: 235 LVPSAPAAAALRLAIPRQVLLDDLDPVVARAFDRALGRLSAAGVQLEHTDLP 286 >gi|83719314|ref|YP_442153.1| amidase [Burkholderia thailandensis E264] gi|257138342|ref|ZP_05586604.1| amidase [Burkholderia thailandensis E264] gi|83653139|gb|ABC37202.1| amidase family protein [Burkholderia thailandensis E264] Length = 476 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 113/429 (26%), Positives = 182/429 (42%), Gaps = 55/429 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + +L GAV++G+ NM EFA Sbjct: 92 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAAADAIAVARLKRAGAVLVGRTNMSEFAF 151 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 152 SGLGLNPHYGTPRSPYRRGVPGDERIAGGSSSGAAASVAHGMAAVALATDTGGSIRIPAA 211 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G KPT R + G + + +LD G I +V A++ + +AG + P Sbjct: 212 FCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLE---------P 262 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + R L +G+ +G+ Y D + + + + L+ AGA + + Sbjct: 263 LVSAARPL----EGVRLGVLTNYVTDGVDAHVAASLDAALKHLEAAGAIVSDARF----- 313 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRI 363 +P + ++ RY G +E Y R + + V RI Sbjct: 314 --------APLDTLPDINRY----------GFSSIEAYAWHRPLVARHRDAYDPRVLARI 355 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + + YL R + + Q D ++ PT P + + + E + Sbjct: 356 LKGEPASA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDD 410 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQI 479 + V A N A+S+P C + P+GL L P R++ L ++GQ Sbjct: 411 DAFARTNALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHRDDALLAIGQA 467 Query: 480 IEKEAGYFR 488 +E R Sbjct: 468 VEAVLATIR 476 >gi|189189018|ref|XP_001930848.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972454|gb|EDU39953.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 440 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 128/496 (25%), Positives = 207/496 (41%), Gaps = 73/496 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI----EVVAQKARA--A 55 S+L + SE R+++ DIS E S + IE + + A+ + V ++A+A A Sbjct: 3 SDLYKLTASEVSARIKAGDISVEEYAKSLLARIEARDEAVQAWAYLDPDFVIKQAKALDA 62 Query: 56 AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 +S++ L G+ I +KD TK + TQ S I P ++ L G Sbjct: 63 VPQSERG-------SLHGVAIAVKDVIYTKDMPTQFNSPIYTNDAPKVDAGSIAILRKAG 115 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAA 174 A++ GK + + + +GP ++ + D TPGGSS GS AAV F Sbjct: 116 ALIFGK------STTTEFAATTFGP-----KTRNPHDPSRTPGGSSSGSGAAVGDFQAPI 164 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 +GT TGGS +P S+ G +KPT+ +R G ++ LD G+ R+V D +L Sbjct: 165 GLGTQTGGSTIRPGSYNGIYALKPTWNSITREGQKIYSLILDTLGLYARSVADLEMLADT 224 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 A +D+ P D+ +++G K + P + +S L Sbjct: 225 FAIHDDAS------PPTDF------TLKGAKFAFLKTMVWPEVGPGTTAALNKAVSLLHA 272 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA++ EIS P ALPA++ + + DG L Y + Sbjct: 273 HGAEVEEISFPEDLNALPAWH--------ATVLNSDGRTA--------FLPEYTIAKDKI 316 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 Q V H G +S R + + R ++ + +LTP+ P A Sbjct: 317 SAQLVGHVENSGK--ISRRAQVEAFDKISAARPVVDEMLGK-----YAAVLTPSVPDEA- 368 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 PLG E+ S S I+ + T P ++VP E MP+G+ L+ + + L Sbjct: 369 PLGIEKTGSASFCLIWTALHT--------PVVNVPGFKGENGMPIGISLVAPRYHDRRLL 420 Query: 475 S----VGQIIEKEAGY 486 + VG++ E E G+ Sbjct: 421 AVSKKVGEVFEAEGGW 436 >gi|82702073|ref|YP_411639.1| amidase [Nitrosospira multiformis ATCC 25196] gi|82410138|gb|ABB74247.1| Amidase [Nitrosospira multiformis ATCC 25196] Length = 628 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 116/425 (27%), Positives = 189/425 (44%), Gaps = 51/425 (12%) Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+P IKD G+ T A + P +TV Q+L D GA+ +GK N+D+F Sbjct: 66 ALPLYGVPFAIKDNIDLAGVPTTAACPAF-AYTPPRSATVVQRLIDAGAIPIGKTNLDQF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + S YG R+ + + + G SSG + A G+ C S+GTDT GS R P Sbjct: 125 ATGLNGTRSPYGVC----RNAFNPEYISGGSSSGSAVAVAKGWAC-FSLGTDTAGSGRVP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F +G KPT G S G++ SLD I T D+ +L+A A YDE D Sbjct: 180 AAFNNLIGHKPTRGWLSTRGVVPACRSLDCVSIFAFTAADAERVLEAAASYDEEDIYSRQ 239 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID-KTWQQGISWLKDAGAKIVEISL-P 305 D + AL Q GIP +L + + +++ ++ L+ G +++EI P Sbjct: 240 RGSSD-DPALQNLRQRFRSGIPPRQQLQFFGNLESARLFEEAVTQLQALGGEVIEIDFSP 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + A Y AE RY ++ + +++ + I+ Sbjct: 299 FLEAAHLLYGGPWVAE------RYAAIQQFFDLHSDEVISPVQE-------------IIA 339 Query: 366 GTYVLSSR-CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAFPLG 417 G + S+ Y+ Y R R ++ R ++E VD +LTPT T A P+ Sbjct: 340 GAHRFSAADAYNGLY-RLRTLKRQADRIWSE-----VDCLLTPTAGTIYRIEEMLADPIR 393 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 N +G+ +T +N+ A++VPA + +P G+ L+ ++ +L + Sbjct: 394 LNTN----LGY-----YTNYINLLDYSAVAVPAGFQKDGLPFGVTLVAPAHQDGSLLHLA 444 Query: 478 QIIEK 482 +++ Sbjct: 445 ARLQQ 449 >gi|222106661|ref|YP_002547452.1| Allophanate hydrolase [Agrobacterium vitis S4] gi|221737840|gb|ACM38736.1| Allophanate hydrolase [Agrobacterium vitis S4] Length = 597 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 120/454 (26%), Positives = 200/454 (44%), Gaps = 48/454 (10%) Query: 24 VELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFA 83 +E V S I AI + ++E+ A KA + + + + L GIP +KD Sbjct: 26 IEEVFSRIAAINDPG----IFLEL-ADKASLLDQAQALGAFSPETKPLWGIPFAVKDNID 80 Query: 84 TKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 G+ T AC + P ++TV + L D GA+++GK N+D+FA G + P Sbjct: 81 VAGLPTTAACPDY--AYTPEIDATVVRLLKDAGALVIGKTNLDQFATGLVGVRT---PHA 135 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P ++D K PGGSS GS+ A A + + ++GTDT GS R PA VG+KP+ G Sbjct: 136 IPRNAIDP--KLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGLNNIVGLKPSVGA 193 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 S G+I +LD I TV D+ + A +D DA +P AL S Sbjct: 194 LSATGVIPACRTLDCVSIFALTVEDAHKVFTVAAKHDAADAYSRTMPT---GHAL-ASAP 249 Query: 263 GMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE 321 + +G+P + ++ ++ + ++++ ++ L G +V+ LP + + Y + Sbjct: 250 VLRIGVPAKSDREFFGDSLMEASFEKALAELSAMGHTLVD--LPFSGF----YEV----- 298 Query: 322 ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 +NL Y+G R ++ + + + F V H+I L++ S R Sbjct: 299 --ANL-LYEGAWVAERYAA---VKEFFDAKPESF-HPVTHKIYSAAKTLTAADAFSGMYR 351 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPT--SAFPLGKEENNSGSMGHIYNDVFTVAVN 439 + ++ + VDVI PT PT + L E + S Y + VN Sbjct: 352 LQALKQQLAPVIAS-----VDVICVPTAPTHYTLADLEAEPIKANSRLGTYTNF----VN 402 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + I+VP +P + L+ PF + L Sbjct: 403 LLDMCGIAVPTGTRNDGLPSSVTLLA-PFGADGL 435 >gi|13474040|ref|NP_105608.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mesorhizobium loti MAFF303099] gi|14024792|dbj|BAB51394.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mesorhizobium loti MAFF303099] Length = 498 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 130/499 (26%), Positives = 216/499 (43%), Gaps = 54/499 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R ++SA+EL ++ I E + ++NA E + + ARA A+ D+ + L G+P Sbjct: 19 VRKGELSAIELTEAAIARAEATRPEINATAEPLYEAARARAKTMDRSL------PLAGVP 72 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD A KG+ + S I P S +T + G + + E + E Sbjct: 73 FAIKDLGIAVKGVPSHGGSRIPASV-PDVNSVMTDRYLAAGLIPIVTSTSPEHGLRLMTE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW + T GGSSGG++A VA + + +D GGSIR P++ TG V Sbjct: 132 SRAFGITRNPWNT-----GHTSGGSSGGAAALVAAGVVPVAHASDGGGSIRVPSACTGLV 186 Query: 195 GIKPTYGRCSRLGIIS---FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+K + GR ++S + +D A +TR+VRDSA+LL G D P Sbjct: 187 GLKTSRGRIPLTPLVSESWYGMVVDHA--VTRSVRDSALLLDLTHGPDSLSPYAALPPKG 244 Query: 252 DYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + A + +++ + ++ L +S K + ++ G ++EI LP Sbjct: 245 TFAAAAARDPGKLSLAVYRKSPLGLPISAETMKALDTAVVLAREGGHTVMEIDLPFIGRD 304 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A + + A A + R + +R G V G ++ TR +G E M+ + Sbjct: 305 FLADFCRTVASAVAGTLRAEALRVGRSVTG----DVERATRVLGRLGE-----MVSAGEI 355 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-PLGKEE--------- 420 + H R I + D + VI P A P G +E Sbjct: 356 YAGLQRLHAASRRMIEETAQYDAVL-----MPVIAHPPLACGALDPKGADELIENLLDKL 410 Query: 421 ------NNSGSMGHIYND--VFT---VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 G + + +FT N++G P+I++P + E +PLG+Q G+P Sbjct: 411 HLTPLLKLKPLFGQLMDKSLLFTHWPAIHNVSGQPSIALPVHVTEAGLPLGIQAAGRPGD 470 Query: 470 EETLFSVGQIIEKEAGYFR 488 EETL S +EK +G+ + Sbjct: 471 EETLLSFAAQMEKLSGWLK 489 >gi|152981221|ref|YP_001352351.1| amidase [Janthinobacterium sp. Marseille] gi|151281298|gb|ABR89708.1| amidase [Janthinobacterium sp. Marseille] Length = 431 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 120/463 (25%), Positives = 194/463 (41%), Gaps = 57/463 (12%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 ++++ ++ + I IE ++A+ Q+ A D + G L G+PIG+ Sbjct: 19 REVTVEDVARAGITHIEEYEPAVHAWQHFDPQQVIEQARRLDAQPHQGL---LYGLPIGV 75 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD T + T S I + +RP ++ GAV++GK EFA T Sbjct: 76 KDLMDTADMPTTYGSPIYENYRPLVDAACVAASRSAGAVLMGKTVTTEFA------TFQP 129 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +P + D TPGGSS GS+AAVA + A+ T T GSI +PA++ G VG KP Sbjct: 130 GPTRNPHGATD----HTPGGSSSGSAAAVASGMVPAAFATQTAGSIVRPAAYCGVVGYKP 185 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T+G GI S +PSLD G++TR V D+A + A+A +P + Sbjct: 186 TFGTLPLAGIKSLSPSLDTVGVLTRNVADAAFFIGALAR------------LPLSSQLAP 233 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 ++ + VGI + + S +Q + L+ +GA + +I LP L Sbjct: 234 EAAPRLRVGICRTPNWERASVATRDAIEQAVRLLERSGAVLRDIDLPAPCGGL------- 286 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 +A + Y E E + + GF + + G R D Sbjct: 287 -TDAQIRIMSY---------EASAAFEPEARSHAEGFSKAFAAVLEAG------RGIDGT 330 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 A + R + VD++L P+T A P G + + +F Sbjct: 331 SYVAAQALAAASRQMVAGVFETVDILLAPSTEGEA-PAGLDATG--------DPIFNRMW 381 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ G P + VP MP+G+ LIG + + + + ++E Sbjct: 382 SLLGNPCVHVPLGAGPGGMPIGVTLIGPRWGDASTLAAANLLE 424 >gi|302898963|ref|XP_003047952.1| hypothetical protein NECHADRAFT_79968 [Nectria haematococca mpVI 77-13-4] gi|256728884|gb|EEU42239.1| hypothetical protein NECHADRAFT_79968 [Nectria haematococca mpVI 77-13-4] Length = 1841 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 122/461 (26%), Positives = 192/461 (41%), Gaps = 53/461 (11%) Query: 29 SYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIH 88 S ++A + +N + A+I + + + +++ N + L G+P KD KG Sbjct: 45 SLVEAEKAANPKTKAWISLATPQQLEDQWTNLQKLDNATSLPLYGVPFAAKDNIDAKGFI 104 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSM 148 T A + +S V +L GA+++GK N+D+FA G S YG V Sbjct: 105 TTAACPSFNSDPATADSAVVARLKAAGAIIVGKTNLDQFATGLVGTRSPYGAV------- 157 Query: 149 DSTDKFTPGGSSGGSSAAVAGF----LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + F PG SGGSS+ A + S+GTDT GS R PA +G+KPT G S Sbjct: 158 --PNSFDPGRVSGGSSSGSAVVVARGVVPFSLGTDTAGSGRVPAGLNNIIGLKPTRGALS 215 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD------ 258 G+I +LD I T V D+ +L A GYD D+ P + ALD Sbjct: 216 VRGVIPACKTLDCVSIFTLNVSDAETVLSAAEGYDLEDSYSRPRPDAKHAYALDGFGSAS 275 Query: 259 -QSIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 + + V ++ R D+ P +++ ++ K G IV + + L Sbjct: 276 NATRPSLAVCAEPDWFGRDDHHPP-----YEKALARAKSLGWDIVPVDF-TILFKLAKLL 329 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR-C 374 P A RY+ +R + + ++ V +I+I LS+ Sbjct: 330 YYGPWVAE----RYEAIREFIEASPVEAMD------------PVVRKIIIRAQTLSAADV 373 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 + YLR + R AF Q D +L PT+PT FP ++ + + + Sbjct: 374 FAGEYLRQD-----LTRQIEVAFSQ-FDGLLVPTSPT--FPTMEQIQKNPIEENSLLGTY 425 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 T VN A+S+PA +P G+ LI ++E L S Sbjct: 426 TNFVNFLDWSALSIPAGFRPDGLPFGITLISNRWQEPLLLS 466 >gi|225427953|ref|XP_002277463.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 510 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 135/500 (27%), Positives = 218/500 (43%), Gaps = 67/500 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEV----VAQKARAAAEESDKRIINGDARDLEGIPI 76 +++ +LV+ Y+ I + ++ IEV + Q +A E K ++ L GIPI Sbjct: 48 LTSRQLVEFYLGEIFRLSPLLHGVIEVNPDALYQADKADRERKAKSPVSRSV--LHGIPI 105 Query: 77 GIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD TK ++T A S L ++ V KL GA++LGK ++ E+A N Sbjct: 106 LLKDNIGTKDKLNTTAGSFALLKSVVPRDAGVVMKLRKAGAIILGKASLSEWA----NFR 161 Query: 136 SYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S P R + + TP GSS GS+ +VA L A S+GT+T GSI PASF Sbjct: 162 SLNAPPGWSARGGQGLNPYVLSATPCGSSSGSAISVAANLVAVSLGTETDGSILCPASFN 221 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 VGIKPT G SR G++ +P D G TV D+ +L AI G+D DA Sbjct: 222 SVVGIKPTVGLTSRAGVVPVSPRQDTIG----TVLDAVQVLDAIVGFDYNDAEATREASK 277 Query: 248 -LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIV-EIS 303 +P Y++ L ++G +GI + S + + ++ L+ GA +V ++ Sbjct: 278 YIPYGGYKQFLKPYGLKGKRLGIVRNPFFTTGSGAALTQAFEHHFYTLRQEGAVLVDDLE 337 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IGFGQEVKH 361 + + L A S EA++ LA + + L KD++ + + I F Q+ Sbjct: 338 IANINVILNA---TSSGEATALLAEF---KLSLNSYLKDLVASPVRSLADVIAFNQKFSD 391 Query: 362 RIMIGTY----VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-----GVDVILTPTTPTS 412 MI + L+++ + +K + + R + FE+ +D ++TP + Sbjct: 392 LEMIKEFGQDIFLAAQATNGIGDVEKKALSNLARLTRDGFEKLMIENKLDALVTPGS--- 448 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 DV V + + G P ISVPA K +P G+ G E Sbjct: 449 -------------------DVAPV-LAIGGFPGISVPAGYDYKGVPFGICFGGLKGSEPK 488 Query: 473 LFSVGQIIEKEAGYFRPHKW 492 L + E+ +P + Sbjct: 489 LIEIAYGFEQATKIRKPPSF 508 >gi|85712845|ref|ZP_01043887.1| amidase [Idiomarina baltica OS145] gi|85693309|gb|EAQ31265.1| amidase [Idiomarina baltica OS145] Length = 545 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 136/497 (27%), Positives = 224/497 (45%), Gaps = 40/497 (8%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA--AAEESDKRIINGDAR- 69 +D L ++S+ EL+ Y++ IE +N Q V++ A A+ D G+ R Sbjct: 58 QDALAQGELSSAELITHYLRQIEANNQQGAQLRAVISLNPDALNQAKMLDNEREQGNVRG 117 Query: 70 DLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIP+ +KD T G+ A S + P ++T+ L GA++LGK N+ E+A Sbjct: 118 PLHGIPVLLKDNIDTADGLANTAGSVLFAENYPEDDATLVTNLRKQGAIILGKANLSEWA 177 Query: 129 -MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 S+ +S + V R+ + T G S+G +A A F A +GT+T GS+ P Sbjct: 178 NFRSTRSSSGWSGVGGLARNPYDPTRSTCGSSAGSGAAVAADFTTFA-VGTETDGSLVCP 236 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV- 246 + G V IKPT G SR GII + S D AG + RTV + L++A+A YD D+ Sbjct: 237 GAVNGIVSIKPTLGLISRDGIIPISHSQDTAGPMARTVAGAVTLMQAMASYDGSDSASFR 296 Query: 247 -NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + + DY + ++G +G+ + L + +D+ ++Q + LK GA +V++ +P Sbjct: 297 SDTVLTDYLN--EDGLKGKRIGVVR--NLMGYNELLDQQFEQQLDVLKAQGATLVDVEMP 352 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-----FGQEVK 360 A + + E ++A Y D++E N R FGQE+ Sbjct: 353 TYGEYGDAEFTVLLYEFKHDMAAYLATTNLPYRSMSDLIEA--NNRMADKELPYFGQEL- 409 Query: 361 HRIMIGTYVLSSRCYDSHYLRA-RKIRTLIKRDFTEAF--EQGVDVILTPTT-PTSAFPL 416 IM + +S YL A K + L + + E +D+++ PTT P+ L Sbjct: 410 -FIMANNMTAAD---ESRYLDALEKSKRLAGPEGIDKMLTEHDLDLLVAPTTGPSWKIDL 465 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE----KKMPLGLQLIGQPFREET 472 ++ +GS + +AG P I+VP E K+P+G+ E Sbjct: 466 VNGDHYAGSA--------SSPAAVAGYPHITVPMGYIELPKQPKLPVGISFFSTANAEPV 517 Query: 473 LFSVGQIIEKEAGYFRP 489 L E+ + +P Sbjct: 518 LIEAAYSYEQATQHRQP 534 >gi|169607647|ref|XP_001797243.1| hypothetical protein SNOG_06882 [Phaeosphaeria nodorum SN15] gi|111064413|gb|EAT85533.1| hypothetical protein SNOG_06882 [Phaeosphaeria nodorum SN15] Length = 533 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 118/439 (26%), Positives = 196/439 (44%), Gaps = 56/439 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G +KD A KG+ ++ + GF P +++V ++ + G +LGK + Sbjct: 101 LKGKTFALKDNVAVKGVPMLLGTNFIKGFVPDCDASVVTRILEAGGQILGKAVCENMCHS 160 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +++ +S G V SP+ S SS GS VA ++G D GGSIR PA+ Sbjct: 161 ATSHSSGTGIVESPFAKGYSAGG-----SSSGSGVLVALGEVDGAVGADQGGSIRVPAAN 215 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP- 249 G VG+KPT+G S P+ D G +T++V D+A+ L+AIAG D D P Sbjct: 216 CGIVGLKPTFGLVPYTASGSNEPTNDHLGPMTKSVLDNALFLEAIAGNDNIDDRSFAAPH 275 Query: 250 ---VPDYER----ALDQSIQGMTVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVE 301 +P Y +++ +QG I E L L P + KT++ ++ D GA + E Sbjct: 276 PSKLPKYSSIMSLPMEKPLQGKLFAIITESLLTPALDPRVVKTFRVAVAKYVDLGATVEE 335 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE--- 358 +S+P + IS + L++ G +G R G +L + N+ GQE Sbjct: 336 VSIPIHSKGAAIWTGIS--KVGGFLSKTSGA-FGRR--GHQMLGL--NSLLHPMGQENWD 388 Query: 359 -----VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP--- 410 K+ + G Y ++ + +A + ++ + A E DV+ TPT P Sbjct: 389 EAYASTKNIYLNGLY--ATEKFPHLLAKATNLSRQLRDAYDAALET-YDVLFTPTLPYVA 445 Query: 411 -----TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE----------K 455 A PL E + +G N T N +G P +++P + E Sbjct: 446 TSHAAPDATPL---EQITKQIGLTAN---TAPFNQSGHPVLALPIGMLEVLEGPGVKDGV 499 Query: 456 KMPLGLQLIGQPFREETLF 474 K+P+ +Q+IG+ + E ++ Sbjct: 500 KLPVSMQVIGKWWDELAIY 518 >gi|257089162|ref|ZP_05583523.1| predicted protein [Enterococcus faecalis CH188] gi|312904245|ref|ZP_07763407.1| amidase [Enterococcus faecalis TX0635] gi|256997974|gb|EEU84494.1| predicted protein [Enterococcus faecalis CH188] gi|310632341|gb|EFQ15624.1| amidase [Enterococcus faecalis TX0635] gi|315577975|gb|EFU90166.1| amidase [Enterococcus faecalis TX0630] Length = 528 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLSGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|297710160|ref|XP_002831771.1| PREDICTED: fatty-acid amide hydrolase 2-like [Pongo abelii] Length = 532 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 119/497 (23%), Positives = 203/497 (40%), Gaps = 59/497 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R + + +++V +YI I++ N +N ++ ++A A D+++ D LE Sbjct: 60 IRQRQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLEN 119 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +K+ F +G+ + ++TV L GA+ LG N E Sbjct: 120 KWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAISKTDATVVALLKGAGAIPLGITNCSEL 179 Query: 128 AMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG RS + D + GGSSGG +A +G+D GGSIR Sbjct: 180 CMWYESSNKIYG------RSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRM 233 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KP+ G G A + G + R D A +LK +AG Sbjct: 234 PAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFQCTGPMCRYAEDLAPMLKVMAG----- 288 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLD-----YLSPTIDK----TWQQGISWL 292 P ++ LD + + K Y ++ +L +D+ T ++ + L Sbjct: 289 --------PGIKKLKLDTKVHLKDL---KFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHL 337 Query: 293 KD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + + L +Y+ + + A+ V L GK + ++E + Sbjct: 338 ETILGASVQHVKLKKMKYSFQLWTTMMSAKGHDGKEPMKFVDL-LGDHGKHVNPLWELIK 396 Query: 352 SIGFGQEVKHRIMIGTYVLSS--RCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPT 408 G V IG +L R + Y + + + ++++ E G D V L P+ Sbjct: 397 WC-LGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVEML--GDDGVFLYPS 453 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT A + + +N +T + GLP P L K +PLG+Q++ PF Sbjct: 454 HPTVA------PKHHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAGPF 507 Query: 469 REETLFSVGQIIEKEAG 485 + +V Q +EK G Sbjct: 508 NDHLTLAVAQYLEKTFG 524 >gi|296534637|ref|ZP_06897042.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957] gi|296265025|gb|EFH11245.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957] Length = 449 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 114/417 (27%), Positives = 168/417 (40%), Gaps = 35/417 (8%) Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 + L GIP +KD G+ T A + P ++ Q+L + GA+ + K N+D+FA Sbjct: 67 KPLWGIPFAVKDNIDVAGMPTSAACPAF-AYAPDRDAGAVQRLVEAGAIPMAKTNLDQFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G + + P PGGSS GS+ AVA L S+GTDT GS R PA Sbjct: 126 TGLVGVRTPH-----PVPRNPRAPGRVPGGSSSGSAVAVARGLLPFSLGTDTAGSGRIPA 180 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG+KPT G S G++ SLD + TR V ++ + +AG D D Sbjct: 181 GLCGLVGLKPTPGAVSSRGVVPACRSLDCVSLFTRGVAEAWAVQAVLAGPDAEDPWSREF 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHT 307 P+ D A +G+P E + W ++ L+ G +V + P Sbjct: 241 PLGDPASA----PAARRIGVPDEASRRRFDAAAEAAWDAALARLEGLGLALVPVDFSPFF 296 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + A Y AE + L + ++G + TR I GQ +H Sbjct: 297 EVAALLYEGAWVAERLAALEDF--------LDGAPDGAVLPVTRGIIEGQGSRHSAADAF 348 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 L H L+A R T+ G+D + PT P FP +E Sbjct: 349 RAL-------HRLQA-------LRHATQPLWAGIDALAVPTAPL--FPTLEELEADPIGP 392 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 + +T VN+ GL A++VP +P G IG + L ++G E A Sbjct: 393 NARLGTYTNFVNLLGLAALAVPGPDRPDGLPAGATFIGPGGSDAALAALGLRFEAAA 449 >gi|254453542|ref|ZP_05066979.1| amidase [Octadecabacter antarcticus 238] gi|198267948|gb|EDY92218.1| amidase [Octadecabacter antarcticus 238] Length = 454 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 117/439 (26%), Positives = 201/439 (45%), Gaps = 49/439 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEGI 74 + S +I V+L D Y+ AIE + Y V A +AR+ A + +R G L+G+ Sbjct: 28 IESGEIDPVDLCDVYLAAIEQHPMRDRIYARVTADRARSEAAAASERAKAGQRLSSLDGV 87 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 PI KD F T G+ T+A + +++G P ++ V + G V LGK +M E A Sbjct: 88 PISWKDLFDTAGVATEAGTKLMEGRVPTTDAEVLRVATGMGLVCLGKTHMSEIAFSGLG- 146 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 Y P+ + ++ D PGGSS G++A+VA L AA++G+DTGGS+R P+ + V Sbjct: 147 ---YNPMTATPPCVNDPDA-VPGGSSSGAAASVAFGLAAAAVGSDTGGSVRVPSVWNDLV 202 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+K T+GR G ++ D G + R++ D+A++L A+ G D Sbjct: 203 GLKTTFGRLPVAGSVALCTEFDTVGPLCRSIEDAALMLVALEGGRSVDLK---------- 252 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 S++GM + +D ++ + + L AGA+IV + +P + A Sbjct: 253 ---GASVRGMRFAALQTVVMDDVADASLAGYTAALEKLAAAGAEIVPLDVPVLERAFAMS 309 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + A+A +N +D++E + ++ R+ G VL+ Sbjct: 310 LPLYTADAYANW--------------RDLVEAEPDK----MYHQILQRVRGGKDVLAHE- 350 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 Y S + R IR + D T G D +L P + P E + + ++ ++ Sbjct: 351 YLSLWAELRDIRG-VYADAT----AGYDAVLCPG--VANMPPNLERLATDADYYLQENLL 403 Query: 435 TV----AVNMAGLPAISVP 449 T+ N+ GL ++++P Sbjct: 404 TLRNTRVANLMGLASLALP 422 >gi|110835367|ref|YP_694226.1| allophanate hydrolase [Alcanivorax borkumensis SK2] gi|110648478|emb|CAL17954.1| amidase family protein, putative [Alcanivorax borkumensis SK2] Length = 599 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 122/468 (26%), Positives = 208/468 (44%), Gaps = 55/468 (11%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPI 76 RS +++ V+ + +++S + +I ++ + + A ++ + + L GIP Sbjct: 14 RSGELTPVQAMKQLATTLQDSERAL--WIHLLDEASLTAQAQA----LTDPSLPLYGIPF 67 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD G+ T A + P ++TV + L D GA+++GK N+D+FA G S Sbjct: 68 AVKDNIDVVGMPTTAACPAF-AYTPTEDATVVRLLRDAGAIVVGKTNLDQFATGLVGTRS 126 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YG V +P+ + GGSS GS+ AV+ L S+GTDT GS R PA+FT TVG+ Sbjct: 127 PYGEVPNPFNP-----DYLSGGSSSGSATAVSLGLVPFSLGTDTAGSGRVPAAFTNTVGL 181 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 KPT G S G++ +LD I V D+ + + I+ +D D P R Sbjct: 182 KPTRGAISTHGVVPACRTLDCVSIFALNVDDAQEIFRLISQFDSADPYSRAAP-----RL 236 Query: 257 LDQSI-QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L + + T+GIPK+ + + W++ + L++ A ++ I Q A Y Sbjct: 237 LTTGLPERPTLGIPKDLPW-FEDSQAQQLWERQLDQLREI-ANLITIDTTVLQDAAALLY 294 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM-----IGTYVL 370 +G + E + T + Q+ + ++ I Sbjct: 295 -----------------------QGPWVAERFIVTEPL--LQKSPYTLLPVIRDILAPAA 329 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + DS RA+ +KR +EA VD +L PTTP + + N ++ Sbjct: 330 ALTAADS--FRAQYQLAELKRQ-SEALMAQVDALLLPTTP-GIYTRAAVQANPITLNSQL 385 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +T VN+ L A+++P E +P G+ LIG +++ L G+ Sbjct: 386 G-TWTNFVNLLDLCALALPGGFREDGLPGGVTLIGPAWQDHALADFGR 432 >gi|195972892|ref|NP_777572.2| fatty-acid amide hydrolase 2 [Homo sapiens] gi|74757585|sp|Q6GMR7|FAAH2_HUMAN RecName: Full=Fatty-acid amide hydrolase 2; AltName: Full=Amidase domain-containing protein; AltName: Full=Anandamide amidohydrolase 2; AltName: Full=Oleamide hydrolase 2 gi|49256619|gb|AAH73922.1| Fatty acid amide hydrolase 2 [Homo sapiens] gi|55666141|emb|CAH71179.1| fatty acid amide hydrolase 2 [Homo sapiens] gi|57209303|emb|CAI40731.1| fatty acid amide hydrolase 2 [Homo sapiens] gi|57209444|emb|CAI40852.1| fatty acid amide hydrolase 2 [Homo sapiens] gi|57209944|emb|CAI42802.1| fatty acid amide hydrolase 2 [Homo sapiens] gi|119613651|gb|EAW93245.1| hypothetical protein FLJ31204 [Homo sapiens] gi|167410131|gb|ABZ79724.1| fatty acid amide hydrolase 2 [Homo sapiens] Length = 532 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 119/497 (23%), Positives = 203/497 (40%), Gaps = 59/497 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R + + +++V +YI I++ N +N ++ ++A A D+++ D LE Sbjct: 60 IRQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLEN 119 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +K+ F +G+ + ++TV L GA+ LG N E Sbjct: 120 KWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSEL 179 Query: 128 AMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG RS + D + GGSSGG +A +G+D GGSIR Sbjct: 180 CMWYESSNKIYG------RSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRM 233 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KP+ G G A + G + R D A +LK +AG Sbjct: 234 PAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAG----- 288 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLD-----YLSPTIDK----TWQQGISWL 292 P +R LD + + K Y ++ +L +D+ T ++ + L Sbjct: 289 --------PGIKRLKLDTKVHLKDL---KFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHL 337 Query: 293 KD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + + L +Y+ + + A+ V L GK + ++E + Sbjct: 338 ETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDL-LGDHGKHVSPLWELIK 396 Query: 352 SIGFGQEVKHRIMIGTYVLSS--RCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPT 408 G V IG +L R + Y + + + ++++ + G D V L P+ Sbjct: 397 WC-LGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDML--GDDGVFLYPS 453 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT A + + +N +T + GLP P L K +PLG+Q++ PF Sbjct: 454 HPTVA------PKHHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAGPF 507 Query: 469 REETLFSVGQIIEKEAG 485 + +V Q +EK G Sbjct: 508 NDHLTLAVAQYLEKTFG 524 >gi|227823710|ref|YP_002827683.1| amidase [Sinorhizobium fredii NGR234] gi|227342712|gb|ACP26930.1| putative Glu-tRNA amidotransferase [Sinorhizobium fredii NGR234] Length = 435 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 121/415 (29%), Positives = 186/415 (44%), Gaps = 44/415 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S I P ++T+ ++L GAV++GK +M EFA Sbjct: 57 LDGRIVSIKDLFDIAGEPTLAGSIIRRMAPPASADATIVRRLRAAGAVIIGKTHMTEFAF 116 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + +Y PV P ++D PGGSS G+ +VA +IG+DTGGS+R PA+ Sbjct: 117 TAVGLNPHY-PV--PGNAVDPM--LIPGGSSSGAGVSVAEGTSDIAIGSDTGGSVRIPAA 171 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G +PSLD G + +V D A+ +AG T P Sbjct: 172 LQGLVGFKPTARRVPLDGAFPLSPSLDSIGPLALSVADCALADAVMAGDRPEPLT----P 227 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +P + G+ +GIPK L+ L+P + K ++ G+ L AGA++ E+ + Sbjct: 228 LP---------VDGLKLGIPKGVLLEELAPDVAKAFEAGLQRLSRAGARLAELEIDD--- 275 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 L A + + A A +LA + R D L E ++ R+ + Sbjct: 276 -LLARF--AEATAIGSLAGLEASRI-----HADWLVDDEAPVDPRVKSPLRRRLAVPDTA 327 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 L + H L AR + + D++L PTTP A + E + I Sbjct: 328 LENLLKTRHAL-ARAM---------DGRLAPFDLVLLPTTPIPAVRIAAVEEDKREYRRI 377 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + T N L AI++P + +P GL L+G+ + TL + +E+ Sbjct: 378 EGLLLRNTEVANQFDLTAITLP--MPGAALPAGLMLMGRNGTDRTLLRLAACVER 430 >gi|120608899|ref|YP_968577.1| amidase [Acidovorax citrulli AAC00-1] gi|120587363|gb|ABM30803.1| Amidase [Acidovorax citrulli AAC00-1] Length = 492 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 124/492 (25%), Positives = 206/492 (41%), Gaps = 66/492 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R +++ VEL + N ++A +EV A A A+ + G L G+P Sbjct: 22 VRQGEVTPVELAAQAAAGVAKVNPALSAVVEVFAD---AVADPQQAGMQAGGP--LAGVP 76 Query: 76 IGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD T G + S + G RP ++ +TQ++ G ++G+ EF + SS E Sbjct: 77 FFMKDLGPTLAGRLQEQGSLFMRGHRPTEDAWLTQQMRRAGLNLMGRTTTPEFGVCSSAE 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +PW + +T GSS G++A VA + S TD GGSIR PA F G + Sbjct: 137 NPAVYVTRNPWNT-----GYTTCGSSAGTAAIVAAGVVPMSHATDGGGSIRIPAGFNGNI 191 Query: 195 GIKPTYGRCSRLGIISFAPS-------LDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 G+KP+ G+ S AP + G +RTVRD+A + A G + Sbjct: 192 GLKPSR------GVFSIAPHASDITGYVSTQGCHSRTVRDTAAFVDACRGGAPGEFMPYW 245 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 Y + + + + + E+ +P I ++ +L+ G + VE +LP Sbjct: 246 TAPEPYTELIRRDPARLRIALSHEWGDYRATPAIVAELEKAGRFLEGLGHQ-VEWALP-- 302 Query: 308 QYALPAYYIISPAEASSNLARY-DGV--RYGLRVEGKDILE-----MYENTRSIGFGQEV 359 Q L A + SN A+ +G+ R GL D++E ++E R + + + Sbjct: 303 QVDLRAAFRAQTTCYISNFAQVINGLLERRGLERPPADLIEPINIRIWEAGRGLPYAE-- 360 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +HR M + ++R + AF + D++LTP T P+G Sbjct: 361 RHR-MQAVFNTTARGFG-------------------AFFEDWDILLTPITARPTPPVGTT 400 Query: 420 ENNSGSMGHIYNDVF---------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 E + S D F T N+ G+PAIS+P + +P G+ + + Sbjct: 401 EYLTTSGNPDVLDWFDNLWRFFAYTPLSNLCGIPAISLPMGAQDHGLPFGIHAQARQGHD 460 Query: 471 ETLFSVGQIIEK 482 L + IE+ Sbjct: 461 GLLLQLAAQIER 472 >gi|320108486|ref|YP_004184076.1| Amidase [Terriglobus saanensis SP1PR4] gi|319927007|gb|ADV84082.1| Amidase [Terriglobus saanensis SP1PR4] Length = 613 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 129/243 (53%), Gaps = 9/243 (3%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L F V++ LR++ I+++EL Y+ ++ + +++ + + ++A A+A ++DK I Sbjct: 129 LAFATVTQLASLLRTRKITSLELTKMYLGRLKRYDPKLHFVVTLTEERALASAAQADKEI 188 Query: 64 INGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L GIP G KD + KG T + L+ ++TV Q+L GAV++ K+ Sbjct: 189 AAGKYRGALHGIPWGAKDLLSVKGYRTTWGAAGLEQQSFDTDATVVQRLDAAGAVLVAKM 248 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + A G + + G +PW + + + G +S S+ + GF +IG++T G Sbjct: 249 TLGALANG---DVWFGGKTRNPWNAKQGSSGSSAGSASAVSAGCL-GF----AIGSETLG 300 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI P++ G G++PTYG R G ++ S+D+ G I R V D A++L+ + G D D Sbjct: 301 SISSPSTRCGVTGLRPTYGLVPRTGAMALTWSMDKLGPICRDVEDCALVLEVLQGADGMD 360 Query: 243 ATC 245 T Sbjct: 361 HTV 363 >gi|332561029|ref|ZP_08415347.1| amidase [Rhodobacter sphaeroides WS8N] gi|332274827|gb|EGJ20143.1| amidase [Rhodobacter sphaeroides WS8N] Length = 452 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 14/244 (5%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E +RL S + AVELV++ + I ++ A+ + A A A D R +G A Sbjct: 16 AELAERLASGAVRAVELVEACLAQIAAREPEVQAWAFLDGDHAMAQARALDARRQSGAAL 75 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+G+KD +G+ T G ++ V +L GA+++GK E A Sbjct: 76 GPLHGLPVGVKDVIDVRGMPTGLGLAGGAGRVAQADAFVAARLRAAGAILMGKTATAEAA 135 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + P + + D TPGGSS GS+AAVA + +IGT TGGS+ +P Sbjct: 136 F------------LEPAATRNPHDPARTPGGSSSGSAAAVAAGMVPLAIGTQTGGSVIRP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G G KP++G R G+++ +PSLD G+ R+V D A+L +A+AG+D D + Sbjct: 184 AAFCGIAGFKPSFGLIPRSGVLTQSPSLDTMGVFGRSVADVALLAEALAGHDPADPASLL 243 Query: 248 LPVP 251 P P Sbjct: 244 QPAP 247 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 11/95 (11%) Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 R + YL A + R+ ++ F + D IL P P G + + + I+N Sbjct: 343 RIPAADYLAALEARSALRAGLEPIFHR-CDAILCPAAP------GPAPDRATTGDAIFNG 395 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 ++T GLPA+++P + +P+G QL+G P Sbjct: 396 LWT----FCGLPALTLPLFVSSDGLPMGAQLVGPP 426 >gi|240170019|ref|ZP_04748678.1| amidase, AmiC_2 [Mycobacterium kansasii ATCC 12478] Length = 498 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 142/505 (28%), Positives = 216/505 (42%), Gaps = 41/505 (8%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L+ A++E +R K ++ EL+ Q + N ++NA + + + A A +D R+ Sbjct: 9 LDATALAELVER---KQVTPAELLALARQRADAVNPRLNAIVRRLDEVADRQA--ADPRL 63 Query: 64 INGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G+P IKD +G T + S L + +TQ+ D G V+ GK Sbjct: 64 QG----RFAGVPFLIKDLDQEYQGFPTSSGSRSLANDVADRHALITQRFLDAGLVIFGKT 119 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N EF E Y+GP +PW + TPGGSSGGS AAVA + A+ D GG Sbjct: 120 NTPEFGAKGVTEPEYWGPARNPWNL-----QRTPGGSSGGSGAAVAAGIVPAAGANDGGG 174 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA--GIITRTVRDSAILLKAIAGYDE 240 SIR PA+ G VG+KP+ G S G + P A G+++RTVRDSA L AI G + Sbjct: 175 SIRIPAACNGLVGLKPSRG-LSPYGPQTGEPMFGMAVQGVVSRTVRDSAGLYDAIVGPNP 233 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGI-------PKEYRLDYLSPTIDKTWQQGISWLK 293 V LP + + + +G P+ +R + +D L+ Sbjct: 234 RAGYQVRLPDAPFTEHIKNRPGVLAIGYSTSSAINPRPHREAVAA--VDG----AAKLLQ 287 Query: 294 DAGAKIVEISLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEG--KDILEMYENT 350 D G ++ E+ P+ AL ++ I A+ ++A R G R D L M E Sbjct: 288 DLGHRVEEVKPPYDDAALARDFLTIWFAQLYRHVADIKA-RIGARDSDFEADTLGMCELA 346 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 RS G ++ I Y+ S + Y TL T + T Sbjct: 347 RSAGVLAPMQALENINNYIQSLTTFHESY-DYFLTPTLATPPLTVGATATSPRLQTVARV 405 Query: 411 TSAFPLGKEENNSGSMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 S GK SG + + D +T N+ G PAISVP ++ +PLG+Q +G Sbjct: 406 LSKLHAGKVLALSGILDQLIQDSLGWVPYTQLANLTGRPAISVPLHWTDEGLPLGVQFVG 465 Query: 466 QPFREETLFSVGQIIEKEAGYFRPH 490 + + L + +E+ + + H Sbjct: 466 RLGADGDLLQLAAQLEEARPWAQRH 490 >gi|110679655|ref|YP_682662.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Roseobacter denitrificans OCh 114] gi|109455771|gb|ABG31976.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Roseobacter denitrificans OCh 114] Length = 445 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 128/497 (25%), Positives = 203/497 (40%), Gaps = 75/497 (15%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS L+ +S+ +++ ++ LV + E N +NA ++ A AE Sbjct: 1 MSPLDG-PISQLVAAVQTGAVTPKALVAEALARAEARNPAINAICQI-NPHALTEAENVS 58 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 KR+ G+ L G+P+ IKD G+ S + F ++ +L GAV++G Sbjct: 59 KRLQTGETLPLAGVPVLIKDNIWVAGLRCAQGSKLFADFIAPQDAEAVTRLRVAGAVIIG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 EFA + + G +P TPGGSSGGS AAVA + ++GTD Sbjct: 119 ISTCSEFACKGATNSPLQGITRNP-----VNPDLTPGGSSGGSVAAVAAGIVPLALGTDA 173 Query: 181 GGSIRQPASFTGTVGIKPT-----YGRCSR---LGIISFAPSLDQAGIITRTVRDSAILL 232 GGS R+P + TG G KPT YG C GI P I R + D ++ + Sbjct: 174 GGSSRRPPAHTGLCGFKPTQDLIPYGPCHDEPVWGISVICP-------IARRMEDISLAM 226 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +++AG + +P P E A G + ++ ++ DK + L Sbjct: 227 QSLAGLEP-------VPAPMLEIAASSDF-GTGQALDRDVAANF-----DKV----LGVL 269 Query: 293 KDAGAKIV--EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 + AG + +I P T + I P + + LA YG +++ T Sbjct: 270 EGAGVSVTQAQIDWPGTIKG----HSILPLQ-CAGLADL----YG---------DIWRET 311 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD---VILTP 407 + F + +I G +H I E +D VI TP Sbjct: 312 PEL-FDPAIAGQIETGLSFTGVDVAGAHQ---------ISHQMRETLRAALDRYGVIATP 361 Query: 408 TTPTSAFPLGKEENN---SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 TTP +A+P ++ G + FT +N AG+PA+S+P PLGLQLI Sbjct: 362 TTPCAAWPAAQDAPTRIGGTPAGPRDHAAFTPQINHAGVPALSLPCGTDGDGRPLGLQLI 421 Query: 465 GQPFREETLFSVGQIIE 481 + + L ++ + +E Sbjct: 422 ARAGHDAELIALARRLE 438 >gi|163841055|ref|YP_001625460.1| amidase [Renibacterium salmoninarum ATCC 33209] gi|162954531|gb|ABY24046.1| amidase [Renibacterium salmoninarum ATCC 33209] Length = 469 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 132/494 (26%), Positives = 214/494 (43%), Gaps = 56/494 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ + +E S + S ++ + + IE +NA+ + A+ A AA +S Sbjct: 1 MTKLHDLNAAELAASYASAEFSPSDVCAAVLARIEECEPTLNAFYQQDAEGAIFAAAQST 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R ++G AR L+G+P+ IK+ A KG+ A + + + + + +L ++GAV+L Sbjct: 61 QRWLSGAARGPLDGVPVTIKENIARKGVPMPAGTALPNPPIAVANAPIVDRLVESGAVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G M ++ M SS+ +S +G SPW +T + G + ++AA G L +GTD Sbjct: 121 GSTTMPDWGMLSSSVSSLHGISRSPWNPDWTTGGSSAGARAAAAAAAGYGPL---HLGTD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGSIR P ++ G +KP+ G + AP L + AG I R V D+A+LL +A + Sbjct: 178 IGGSIRLPGTWLGLATLKPSAGL-----VPLDAPYLGRAAGPIARNVSDAALLLSVVAQF 232 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWLK 293 D D T P + + Q I VGI LD + I Sbjct: 233 DARDFTARPYPEMELQNLAFQPIDS-RVGI----HLDAGAGAEVDDEIAAAVLAVAEVFA 287 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR--YGLRVEGKDILEMYENTR 351 AGAK+ +LP + ++ N R R L VE + + Y R Sbjct: 288 KAGAKVA---------SLPPFINQQLMDSLDNFWRTRSYRDFAALTVEDQGRVLPY-IAR 337 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G E I SHY I+ T A D++++P P Sbjct: 338 WCARGSEFDGATTI-----------SHYEAIAAIQQA-----TVAATWPYDLVISPVAPM 381 Query: 412 SAF----PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 +AF P+ ++ +MGHI FT NM+ PA +V P+G+Q+ G+ Sbjct: 382 AAFGAEQPMPNDDPEQ-TMGHI---AFTAPYNMSDQPAATVNCGFTADGRPIGVQIAGRV 437 Query: 468 FREETLFSVGQIIE 481 ++ + S E Sbjct: 438 GADQRVLSAAAWYE 451 >gi|16550576|dbj|BAB71007.1| unnamed protein product [Homo sapiens] Length = 532 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 119/497 (23%), Positives = 203/497 (40%), Gaps = 59/497 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R + + +++V +YI I++ N +N ++ ++A A D+++ D LE Sbjct: 60 IRQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMREAHAVDQKLAEKQEDEATLEN 119 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+ +K+ F +G+ + ++TV L GA+ LG N E Sbjct: 120 KWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSEL 179 Query: 128 AMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG RS + D + GGSSGG +A +G+D GGSIR Sbjct: 180 CMWYESSNKIYG------RSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRM 233 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KP+ G G A + G + R D A +LK +AG Sbjct: 234 PAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAG----- 288 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLD-----YLSPTIDK----TWQQGISWL 292 P +R LD + + K Y ++ +L +D+ T ++ + L Sbjct: 289 --------PGIKRLKLDTKVHLKDL---KFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHL 337 Query: 293 KD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA + + L +Y+ + + A+ V L GK + ++E + Sbjct: 338 ETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDL-LGDHGKHVSPLWELIK 396 Query: 352 SIGFGQEVKHRIMIGTYVLSS--RCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPT 408 G V IG +L R + Y + + + ++++ + G D V L P+ Sbjct: 397 WC-LGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDML--GDDGVFLYPS 453 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 PT A + + +N +T + GLP P L K +PLG+Q++ PF Sbjct: 454 HPTVA------PKHHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAGPF 507 Query: 469 REETLFSVGQIIEKEAG 485 + +V Q +EK G Sbjct: 508 NDHLTLAVAQYLEKTFG 524 >gi|297182035|gb|ADI18210.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit and related amidases [uncultured delta proteobacterium HF0200_39N20] Length = 468 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 118/478 (24%), Positives = 204/478 (42%), Gaps = 36/478 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + L+S +IS L+D+ I+ + Q+N+ ++A+ Sbjct: 1 MTELFKKSAVRVVRLLKSGEISPENLLDAAFSRIDAVDVQINSLPIPCFERAKDQVRNL- 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K+ + +A L G+PI ++D +G+ T S I G P ++ +NGA+ + Sbjct: 60 KKPDSPEAGYLYGLPIAVEDYNDVEGVRTTYRSPIYRGHVPGVSDATVARIEENGAIPIT 119 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ E+A G +G ++PW + + G S G ++A G + A+ G D Sbjct: 120 KSNVPEWA-GGHTFNPVFGTTLNPW----NLNMSVGGSSGGSAAALATGIVWPAT-GNDL 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS R PASF G V ++P G +R SL G + R+ D +++L AG+D Sbjct: 174 GGSQRIPASFNGVVDLRPGPGMVARGKRFQPFDSLWVEGQMGRSAADVSLVLNTQAGHDR 233 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 P LD S + ++ + ++S I + + L DAG ++ Sbjct: 234 GAPFSFPYPERSCSETLDSSSCPKRIAFSRDLGVVHVSKQIAVIAETSVLKLHDAGIEVT 293 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E +P + A+ + A G G +L+ Y N + F V+ Sbjct: 294 E-EIPDFDRVIEAFQTLR--------AILLGTMMG------PLLKKYRNQIAPEFVDNVE 338 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE- 419 G V +++ LR + ++++ FE ++ ++ P + FP+ + Sbjct: 339 R----GFSVTPEALFETERLRWKLFKSMMN-----LFET-LEYLICPAASIAPFPVEQRY 388 Query: 420 -ENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + G Y D F T AV M P IS+P E +P+GLQ++G+P E L Sbjct: 389 VKEIDGFPCETYIDWFSITFAVTMTSCPVISLPCGFTESGLPVGLQVVGRPRSEGVLL 446 >gi|229102559|ref|ZP_04233264.1| Amidase [Bacillus cereus Rock3-28] gi|228680881|gb|EEL35053.1| Amidase [Bacillus cereus Rock3-28] Length = 536 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 15/266 (5%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + + +S EL Y IQ + + +NA E+ A + +R +N Sbjct: 73 VDELQKMVDDEKLSYEELTSIYLFRIQEHDQNGISLNAVTEINPNAIEQARKLDKERSLN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVIVKDNVQTAKVMPTSAGTYVLKDWVADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + GYD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRTGIIPLAEALDTAGPMARTVKDAATLFNTMVGYD 307 Query: 240 ECDATCVNLPVPD-YERALDQSIQGM 264 E DA + D + D SI G+ Sbjct: 308 EKDAMTEKMKDRDRIDYTNDLSIDGL 333 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 32/52 (61%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA + + P+G+ +G+ F E+ LF++G E+++ R K Sbjct: 484 VAGYPELAVPAGYDKNREPVGVVFVGKQFGEKELFNIGYAYEQQSKNRRSPK 535 >gi|290977164|ref|XP_002671308.1| predicted protein [Naegleria gruberi] gi|284084876|gb|EFC38564.1| predicted protein [Naegleria gruberi] Length = 538 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 133/493 (26%), Positives = 212/493 (43%), Gaps = 68/493 (13%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCF------A 83 I+ I+ N + A I+ AEES KR G + +G+P+ IKD + Sbjct: 77 IKEIDEQNPSLKAVIKYDESLLLKQAEESTKRYEEGKEISVFDGVPVTIKDELDLAGFTS 136 Query: 84 TKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 TKG+ T+ H++ ES V++ L G + +GK N +E + + +G Sbjct: 137 TKGMKVTEYTEHVI---TEDEESNVSKSLRALGVMFVGKANQNEIGICARGINVNFGSAR 193 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +P+ T GGSS GS A V L SIGTD GGS+R P+S G G+KPT+ R Sbjct: 194 NPYNLQCDT-----GGSSSGSGAGVGSGLIPLSIGTDGGGSVRIPSSLCGVYGLKPTHYR 248 Query: 203 CS---RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV--------- 250 S + ++F+ + AG +T + D + A+AG D + P Sbjct: 249 ISTKQKSAPVAFSTCV--AGPMTGSAIDLTLSFAAVAGRRSNDLKSLTQPRDLRLNEIRL 306 Query: 251 --PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGIS--WLKDAGAKIVE-ISLP 305 PDY ++ +GI +Y D I K + I + K A+I + I +P Sbjct: 307 MDPDY-----YNLNERKIGIHNDYFNDVKDNRIPKLCRDFIEKVFCKIYNAQIDDSIVIP 361 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 ++ P+ S + +R G++ G YE + E + ++ Sbjct: 362 ----------LLEPSRVSHLVTIAGEMRNGMKDYG-----YYEYDKRSKLCPETRMSLLS 406 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 Y S S Y+ A+++R+ +F + FE+ VDVI PT A + + G Sbjct: 407 QKYASS-----SDYITAQRVRSHQMDEFAKLFEK-VDVIALPTVGCVAPEFDESQVKKGG 460 Query: 426 MGHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 +G DV F N G P++S+P + K P+GLQL+ + + E TL + Sbjct: 461 LGVSDYDVLSSIMKFIFTSNFCGFPSVSIPIGFIDNK-PVGLQLMAKWWDEVTLLKFCLL 519 Query: 480 IEKEAGYFRPHKW 492 EK +P K+ Sbjct: 520 AEKYTEKKKPQKF 532 >gi|221201235|ref|ZP_03574275.1| amidase family protein [Burkholderia multivorans CGD2M] gi|221206311|ref|ZP_03579324.1| amidase family protein [Burkholderia multivorans CGD2] gi|221213592|ref|ZP_03586566.1| amidase family protein [Burkholderia multivorans CGD1] gi|221166381|gb|EED98853.1| amidase family protein [Burkholderia multivorans CGD1] gi|221173620|gb|EEE06054.1| amidase family protein [Burkholderia multivorans CGD2] gi|221179085|gb|EEE11492.1| amidase family protein [Burkholderia multivorans CGD2M] Length = 458 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 113/425 (26%), Positives = 176/425 (41%), Gaps = 47/425 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQK-LWDNGAVMLGKLNMDEFAM 129 L GIP+ IKD F G T+A S +LD P V L GAV++G+ NM EFA Sbjct: 74 LAGIPVSIKDLFDVAGQVTRAGSRVLDDAPPARADAVAVARLRRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+R D GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 134 SGLGLNPHFGTPASPYRRDVPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRVPTQGGVPLSTTLDSFGPIGVTVACCALVDRMLAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P A + ++G+ +G+ Y D + + + L+ AGA + E+ Sbjct: 244 -PSVPAA--RPLEGVRLGVLTNYVTDGVDADVAAALDTALKHLEAAGAIVTEVRF----- 295 Query: 310 ALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 S L R + R+G +E Y R + ++ + T Sbjct: 296 --------------SALDRLPDINRFGF-----SPIEAYAWHRPLLAEHRDRYDPRVLTR 336 Query: 369 VLSSR-CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 +L + YL R + + D ++ PT P + + E + + Sbjct: 337 ILKGEPATAADYLDLLAARRAMLDEAAHTVWARFDALVAPTVPIVPPRIAELETDDAAFT 396 Query: 428 HIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKE 483 + A N A+S+P C + P+GL L P R++ L ++GQ +E Sbjct: 397 RTNALILRNPSAFNFLDACALSLP---CHPRDGAPVGLMLAAAPHRDDALLAIGQSVEAV 453 Query: 484 AGYFR 488 R Sbjct: 454 LNTIR 458 >gi|218529541|ref|YP_002420357.1| amidase [Methylobacterium chloromethanicum CM4] gi|218521844|gb|ACK82429.1| Amidase [Methylobacterium chloromethanicum CM4] Length = 527 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 13/221 (5%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 IE N + A I + Q A +R + L G+P+ IKD G+ + Sbjct: 53 IETYNPRYKALIVMNPQALDDARAIDARRAAGEELGPLAGVPVVIKDTMDMAGLPSTGGW 112 Query: 94 HILDG------FRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWR 146 H L P ++ VT ++ + G V+LGK N+ + GS S+ GP ++P Sbjct: 113 HFLSAEAGGVDLIPATDAPVTARMREAGCVILGKTNVPVLSHTGSHANDSWAGPTLNP-- 170 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 + D+ PGGSS G++ AVA L + +TGGSI+ PAS G VGIKP++G Sbjct: 171 --AAPDRI-PGGSSAGTATAVAASLAVLGLAEETGGSIQNPASAQGLVGIKPSFGLVPNA 227 Query: 207 GIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV 246 G++ A S D G I R VRD+A+ L A+AGY D V Sbjct: 228 GVMPLAGSTRDVVGPIARCVRDAALTLDALAGYSSADPKTV 268 >gi|323356872|ref|YP_004223268.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] gi|323273243|dbj|BAJ73388.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] Length = 467 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 136/513 (26%), Positives = 215/513 (41%), Gaps = 69/513 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ L+ ++++ LR+ +S V+L + Y+ I + + A+ EV AR + Sbjct: 1 MTRLHDLSLAAQVGALRAGTLSPVDLTEHYLGRIAR-FADLGAFAEVTPDAARRRSALLQ 59 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + +G L GIP+ KD A G+ T+ S G P + L GAV +G Sbjct: 60 ESPAHG---ALWGIPLADKDLVARAGVPTRYGSRSRAGLVPTASDPLADALDAAGAVNVG 116 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K + EF + E + P PWR SSGG++ AVA L A++G+D Sbjct: 117 KTSTSEFGLTGFTEPLIHAPARDPWRLSAGAGG-----SSGGAAVAVAAGLLPAAVGSDG 171 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG--- 237 GGSIR P++ G VG+KP+ GR L G I RTV D+A+LL A+ G Sbjct: 172 GGSIRIPSATVGVVGLKPSRGRLPIGSGFDSPDGLSVTGPIARTVEDAALLLDALVGLAP 231 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIP--------KEYRLDYLSPTIDKTWQQGI 289 + A + P D A + +G+ +G+ ++ RLD + T ++ Sbjct: 232 FAYATAAPGHGPFID---ATARDPRGLRIGVTTVSPWDDDEDIRLDADART---AFETAA 285 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 +WL D G ++ + + YA A + + L R R L + ++E Sbjct: 286 AWLSDTGHEVTDTAWHPFGYA--ALFHV--------LWRASAARIPLSEDDMSLVEPL-- 333 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + +E + + + RA + RT+ DF D +LTP Sbjct: 334 --TAWLVREGRRLSSLDLLDGLAAA------RAFERRTIA--DFAR-----FDAVLTPAL 378 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVA---------VNMAGLPAISVPAALCEKKMPLG 460 P+G GH F + VN+AGLPA+++P P+ Sbjct: 379 AQPPQPIGSY------AGHTPERTFAMQVEYAPYSSFVNVAGLPALTLPVTTDATGHPVS 432 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYF-RPHKW 492 +QLIG+P E TL S+ +E+ G P W Sbjct: 433 VQLIGRPGGEATLLSIAAQLEERRGPLPHPPAW 465 >gi|23099818|ref|NP_693284.1| amidase [Oceanobacillus iheyensis HTE831] gi|22778049|dbj|BAC14319.1| amidase [Oceanobacillus iheyensis HTE831] Length = 477 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 119/504 (23%), Positives = 218/504 (43%), Gaps = 65/504 (12%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++ + S ++++V+ V ++I+ I N +NA +E +A A+E D + NG Sbjct: 9 MDATQLSKAILSSELTSVKAVAAFIKHIHEVNPIINALVEDRFIEAIEEAKEYDNLLKNG 68 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R L G+PI IK+ G+ T ++ V +KL + GA+++GK N Sbjct: 69 QKRGPLHGVPISIKESLHVTGLKTTGGLEHRQDLIAIEDAAVVKKLKEAGAIIIGKTNTP 128 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 + YG +PW D + G+ AV G A IG+D GGSIR Sbjct: 129 ALCFCQETDNKLYGRTNNPW---DISKSAGGSSGGEGALLAVGG--AAVGIGSDVGGSIR 183 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLD---QAGIIT-----RTVRDSAILLKAIAG 237 PA F G +G KP + S G PS+ QA ++T ++V+D +L Sbjct: 184 FPAHFNGVIGFKPGKDQISMDG---HFPSIQHDLQARMLTIGPMGKSVQDMRLL------ 234 Query: 238 YDECDATCV-NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 YD + + + + D++ + G + I L+ L ++K++ Sbjct: 235 YDILSPSNIESQKLKDFKLEILPGNSGYPLSIETVDILNQLEYFLEKSFP---------- 284 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 T+ +P Y+ S A + +G + +E E Y N RS + Sbjct: 285 ----------TKRIMPPYFKDS-ALIWQEIMSINGSKL---IED----EAYNNDRSGVYS 326 Query: 357 QEVKHRIMIGTYV--------LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD--VILT 406 +K ++ T V + ++ + + R +I T+I++ E +D +++ Sbjct: 327 SFLKEKLTQRTSVHPYLSWAIIGAKMFKPSHKRVNEILTIIEQG-DGVIETYLDNRLLIF 385 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 P +A P GK S+ Y + N+ GLP++++P + +P+ +Q++ Sbjct: 386 PVYHETALPHGKVFKEIFSIRKTYLQYMPYVAYANVWGLPSLTIPVGESKNGLPISIQIM 445 Query: 465 GQPFREETLFSVGQIIEKEAGYFR 488 +P E+ +F +G++IEK+ F+ Sbjct: 446 SKPGNEDAIFRLGRLIEKKYRGFK 469 >gi|91778721|ref|YP_553929.1| putative urea amidolyase [Burkholderia xenovorans LB400] gi|91691381|gb|ABE34579.1| Putative urea amidolyase [Burkholderia xenovorans LB400] Length = 502 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 228/513 (44%), Gaps = 70/513 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M+++ R R+ ++ +L+D+ I A + + +A+I +++ +E + + Sbjct: 13 MSIAGLHARYRAGSLTPAQLIDA-IAARTSGDDPHHAWIRPLSR------DEMMRYVDAL 65 Query: 67 DARD-----LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + RD L GIP IKD GI T A + P + V +L GA+ +GK Sbjct: 66 EGRDMGTLPLYGIPFAIKDNIDLAGIPTTAACPAY-AYTPTVSAPVVARLIAAGAIPIGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G S + S +G + ++D ++ GGSS GS+ +VA L A S+GTDT Sbjct: 125 TNLDQFATGLSGQRSPHGACRN---ALDP--RYASGGSSSGSAVSVALGLAAFSLGTDTA 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA+F G +G+KPT G S G++ SLD I R+ D+ + A G E Sbjct: 180 GSGRVPAAFHGLIGLKPTKGLLSTAGVVPACKSLDCVSIFARSADDAQRVFDAARGVTEG 239 Query: 242 DATCVNLPVPD-YERALDQ-----------------SIQGMTVGIPKEYRLDYLSPT-ID 282 D P +A+ Q S++G+ G+P+ +L++ T Sbjct: 240 DPYAREFQPPQAVTQAVTQAVTQAVTQAVAQPGAQRSLRGVRFGVPRANQLEFFGDTSYA 299 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD 342 + ++ L+ AGA++VEI P A++ L Y+G R+ Sbjct: 300 HAFDAALTRLRAAGAELVEIDF-------------EPFLATARLL-YEGPWVAERLAA-- 343 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE--QG 400 + + +T+ V I+ G S+ + + R +R +A E Q Sbjct: 344 -IRQFVDTQPDAL-HPVIREIIGGAARWSAADAFAAFDRLAFLR-------MQAAEVWQR 394 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKK 456 +D I+TPT+ T+A + + E + + + +T VN+ L A++VPA LC Sbjct: 395 IDAIVTPTSATTA-TVDELEADPIRVNSRFG-YYTNFVNLLDLSALAVPAGLCAIGRHAG 452 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +P G+ + + + L + + E P Sbjct: 453 LPFGVTFVARAHEDAMLLDLARAWHGETATASP 485 >gi|254560477|ref|YP_003067572.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium extorquens DM4] gi|254267755|emb|CAX23602.1| putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Methylobacterium extorquens DM4] Length = 524 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 13/221 (5%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 IE N + A I + Q A +R + L G+P+ IKD G+ + Sbjct: 50 IETYNPRYKALIVMNPQALDDARAIDARRAAGEELGPLAGVPVVIKDTMDMAGLPSTGGW 109 Query: 94 HILDG------FRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWR 146 H L P ++ VT ++ + G V+LGK N+ + GS S+ GP ++P Sbjct: 110 HFLSAEAGGVDLIPATDAPVTARMREAGCVILGKTNVPVLSHTGSHANDSWAGPTLNP-- 167 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 + D+ PGGSS G++ AVA L + +TGGSI+ PAS G VGIKP++G Sbjct: 168 --AAPDRI-PGGSSAGTATAVAASLAVLGLAEETGGSIQNPASAQGLVGIKPSFGLVPNA 224 Query: 207 GIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV 246 G++ A S D G I R VRD+A+ L A+AGY D V Sbjct: 225 GVMPLAGSTRDVVGPIARCVRDAALTLDALAGYSSADPKTV 265 >gi|239813284|ref|YP_002942194.1| allophanate hydrolase [Variovorax paradoxus S110] gi|239799861|gb|ACS16928.1| allophanate hydrolase [Variovorax paradoxus S110] Length = 569 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 123/424 (29%), Positives = 177/424 (41%), Gaps = 49/424 (11%) Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + DA L G+ +KD G+ T A D RP S V +KL D GA +LG Sbjct: 20 RPVPGADAGPLAGLRFAVKDNIDVAGVPTTAACPAFD-RRPAEHSAVVRKLLDAGASLLG 78 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+D+FA G + S YG V + + + ++ GGSS GS+ VA ++GTDT Sbjct: 79 KTNLDQFACGLNGTRSPYGEVPNAFDA-----RYVSGGSSSGSAYVVAAGEADFALGTDT 133 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS R PA VG+KP+ G S G++ A S D I R+V + +L A AG D Sbjct: 134 AGSGRVPAGLNNIVGLKPSRGLLSAFGVVPAAQSADCVSIFARSVGLAVDVLLAAAGPDA 193 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL---DYLSPTIDKTWQQGISWLKDAGA 297 D Y RAL P +R D LS D +Q +DA Sbjct: 194 RD---------PYSRALALRSHPF----PPAFRFGVPDTLSFFGDAAAEQA---FRDAQL 237 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLA--RYDGVRYGLRVEGKDILEMYENTRSIGF 355 ++ E+ + + S L RY VR G ++ E R I Sbjct: 238 RLAELGGTAVEIPYAPLAEAAALLYESALVAERYAAVRGFFDARGSQVI---EPVRGI-- 292 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + S R Y + + + R E +G+D++L PT PT Sbjct: 293 -------------LESGRGYSAADVFEAQTRLRAIAQQVEPMWRGIDLLLVPTAPTH--- 336 Query: 416 LGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 +E+ + + N +T VN+ AISVP+AL +P G+ LIG + L Sbjct: 337 YTREQMRADPVVLNRNLGAYTNFVNLLDYAAISVPSALRADGLPFGITLIGPCGSDLALA 396 Query: 475 SVGQ 478 +GQ Sbjct: 397 ELGQ 400 >gi|73541348|ref|YP_295868.1| amidase [Ralstonia eutropha JMP134] gi|72118761|gb|AAZ61024.1| Amidase [Ralstonia eutropha JMP134] Length = 507 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 139/494 (28%), Positives = 220/494 (44%), Gaps = 71/494 (14%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E R + +++IS VEL+D+ I IE N +NA ++AR A +++ ++ G+ Sbjct: 14 ELRRLIGTREISPVELLDACIARIETYNPAINAITATCYERARTEARAAEQAVMRGEPLG 73 Query: 71 LEGIPIG-IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L +KD AT G+ T S + P ++ + +L GA+++GK N+ E Sbjct: 74 LLHGLPLGVKDLEATAGLLTTYGSPLYRDNVPSQDNVLVARLRAAGAIVVGKTNIPEMGA 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+++ + +G +P+ GGSSGGS+AA+A G+DTGGS+R PA+ Sbjct: 134 GANSRNAVWGATGNPFNP-----NLNAGGSSGGSAAALAAGFLPVCTGSDTGGSLRIPAA 188 Query: 190 FTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG +P+ G + ++ + P + G + RTV D+ + L A AG D Sbjct: 189 KCGVVGFRPSPGVVPNSRKLLGWTP-ISVVGPMGRTVADACLQLAASAGASASD------ 241 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLD---YLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P Y LD +L+P + W +D G+ V+ + Sbjct: 242 --------------------PLSYELDPGAFLTPQHVDLSDLRVGWTEDFGSCSVDDGIR 281 Query: 306 HTQYALPA---YYIISPAEASSNLARYDGVRYGLRVEG--KDILEMYE--------NTRS 352 A A + S E S +L LR E + E Y+ NTR+ Sbjct: 282 RVFRAKIAEMRHLFKSCDEVSFDLGDVHRCFDVLRAESFVASLHEAYQRDPGSLGPNTRA 341 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 E+ ++ +G DS + +A + R L + F +A+ DVIL+PTTP S Sbjct: 342 ---NYELGAKMSLG---------DSAWAQAEQTRILQR--FQQAYRD-YDVILSPTTPVS 386 Query: 413 AFP---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 FP L E N + Y + T V + PAIS+P + E+ MP GLQ+ G F Sbjct: 387 PFPWTRLFAEIINGERQENYYRWLALTYVVTLTTHPAISLPCGVDEQSMPFGLQITGG-F 445 Query: 469 REETL-FSVGQIIE 481 R + + V Q +E Sbjct: 446 RGDAMALGVAQAME 459 >gi|229592173|ref|YP_002874292.1| putative amidase [Pseudomonas fluorescens SBW25] gi|229364039|emb|CAY51612.1| putative amidase [Pseudomonas fluorescens SBW25] Length = 500 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 137/495 (27%), Positives = 213/495 (43%), Gaps = 55/495 (11%) Query: 6 FMAVSE-SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 +++V+E R R +++V+LV + I + Q+ + IE+ + A AA E D+ Sbjct: 37 YLSVNELGRQMARPGGLTSVDLVSFLQERIRRLDPQLRSVIELNPE-ALEAARELDRERA 95 Query: 65 NGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +G R L GIPI +KD T G+ T A + L G + + L GAV+LGK N Sbjct: 96 SGKVRGPLHGIPILLKDTLETTGMQTSAGAFGLVGASAGKNAPLVDYLIKQGAVILGKTN 155 Query: 124 MDE---FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 M E F G +S G +P S D SS GS+AAVA L ++G +T Sbjct: 156 MSEMAGFRGGPDGWSSRGGQTRNPHHS--DADVGG---SSSGSAAAVAAGLAPLAVGAET 210 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PA+ G VG+KP+ G R GII + D G + R+V D+A++L A++G D Sbjct: 211 NGSIIVPAARNGVVGLKPSVGLLDRNGIIPASQHQDTPGPMARSVMDAALMLNAMSGSDP 270 Query: 241 CDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLS---------PTIDKT-WQQGI 289 D V P DY + L G K R+ YL+ P ++ + + + Sbjct: 271 QDTASVGAPQGIDYTKLL-------VPGALKGKRIGYLATFSKEGETLPVVNSAQFSRTL 323 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 L++ GA +V +++ + + S +A L Y R GL V L + + Sbjct: 324 EVLREQGAVLVPVNMRLADASRYDELLFS--DAKEELNAYLANRSGLPVRSLTELIRFND 381 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 R G H+ ++ S+ + + + + +DF A + Sbjct: 382 ERD---GANEDHQPLLKEISASTLTPEQR----QPLWDALIQDFRSAIDD---------- 424 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P+ E + N F VA AG P I+VP+ E +P G + Sbjct: 425 -----PIKSENLDVMVSDFETNSYFGVAA--AGYPGIAVPSGTDEDGLPTSAYFFGTRWA 477 Query: 470 EETLFSVGQIIEKEA 484 E TL +V E+ A Sbjct: 478 EPTLLAVAHGYEQAA 492 >gi|258572490|ref|XP_002545007.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237905277|gb|EEP79678.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 528 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 148/305 (48%), Gaps = 39/305 (12%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E +D L K ++VELV +Y+ I N Q++ + A A D G R Sbjct: 44 ELQDGLSQKCFTSVELVTAYLVRIREVNRQLHV-VSDFNPDAHLIAVRLDSERRRGKIR- 101 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM- 129 G+ T + S+ L + H ++TV +KL D GA++LGK N+ ++A Sbjct: 102 ---------------GLQTTSGSYALYNAKLHEDATVAKKLRDAGAIILGKANLSQWANF 146 Query: 130 ----GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 SS ++Y G V + + P GSS GS A L A++GT+T GS+ Sbjct: 147 RSLNSSSGWSAYGGQVTAAYYPQQD-----PSGSSSGSGVASDLGLAWATLGTETSGSVV 201 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS VGIKPT G SR ++ + D G + RTV+D+AILL+A AG D+ D Sbjct: 202 GPASSNNVVGIKPTVGLTSRHLVVPISSHQDTIGPLARTVKDAAILLQAFAGRDKNDNYT 261 Query: 246 VNLP---VPDYERALDQS-IQGMTVGIPKEYRLDYLS------PTIDKTWQQGISWLKDA 295 +P +P+Y A S +QG +G+P L L+ P +D + +S +++A Sbjct: 262 SAIPFSRLPNYVSACKPSALQGKRIGVPSNV-LAVLAGSPAHKPVLD-AFNSALSVMEEA 319 Query: 296 GAKIV 300 GA IV Sbjct: 320 GATIV 324 >gi|183982771|ref|YP_001851062.1| amidase [Mycobacterium marinum M] gi|183176097|gb|ACC41207.1| conserved hypothetical amidase [Mycobacterium marinum M] Length = 468 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 133/497 (26%), Positives = 217/497 (43%), Gaps = 59/497 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEES 59 M+EL ++ E + + +S E++ ++ I N +NA +E ++ A+ + Sbjct: 1 MTELCHLSAHELVGLMSTGSVSCREVIQQHLARIRAVNPALNALVEADDPERCLRQADHA 60 Query: 60 DKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGA 116 D+ + G G+P+ IKD G+ ACS G R ++TV +L GA Sbjct: 61 DECVARGAPLGAAHGLPVVIKDVMQVAGL---ACSGGSPGLRAVADTDATVVSRLRAQGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 ++LG N+ E + G + + YG +P+ D T TPGGSSGGS+A VA A S+ Sbjct: 118 IVLGMTNVPEMSRGGESNNNLYGRTNNPY---DLTR--TPGGSSGGSAALVAAGGAALSV 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAI 230 G+D GGSIRQP TG G+KPT+GR R G + F+P + G + R+VRD + Sbjct: 173 GSDGGGSIRQPCHNTGIAGLKPTHGRIPRTGSVFGDALGVFSPFVCY-GPLARSVRDLFL 231 Query: 231 LLKAIAGYDECDATCVNLPV--PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 L + G D D P+ PD D + + V Y D +SP ++ Sbjct: 232 GLSIMNGPDLADPYTAPAPLGSPD-----DVELGTLRV---AAYLDDGISPPSEE----- 278 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 ++ + A + + + +A+P +++L G R G + E Sbjct: 279 VTAVVTAAVEALREVVAVIDHAVPPCL-----NRTTDLLWTSIFLGGDRGRGFE-----E 328 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE----AFEQGVDVI 404 + +IG + + + +R D AR R L+ D AF DVI Sbjct: 329 DLGAIGTTAPSEE---LAEFTAQARQVDFSLTEAR--RRLVDIDHYRIQMLAFMADYDVI 383 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 + P PT A P + + I + + N+ G PA V +P+G+Q+ Sbjct: 384 IGPAMPTPAKP------HHHGLVEISDFSHLMVHNLTGWPAAVVRCGTSPGGLPIGVQIA 437 Query: 465 GQPFREETLFSVGQIIE 481 +P+ + T +V +E Sbjct: 438 ARPWHDGTALAVASHLE 454 >gi|167561085|ref|ZP_02354001.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia oklahomensis EO147] Length = 163 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 65/157 (41%), Positives = 94/157 (59%), Gaps = 6/157 (3%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A A A+ +D + G Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARD-LNAFVHVDADLTLAQAKAADAALAQGV 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+P+ KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 AGPLAGLPVAHKDVFVTRGWRSTAGSKMLANYTSPFDATVVARLAKAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSS 164 AMGSSNE S +GPV +PW + PGGSSGGS+ Sbjct: 124 AMGSSNENSAFGPVKNPWDT-----SAVPGGSSGGSA 155 >gi|167033753|ref|YP_001668984.1| amidase [Pseudomonas putida GB-1] gi|166860241|gb|ABY98648.1| Amidase [Pseudomonas putida GB-1] Length = 485 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 203/461 (44%), Gaps = 50/461 (10%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +S E++ +Y+ IE N Q+NA + + A+ A A+E D+ G +R + G+P I Sbjct: 26 LSCREVMQAYLAHIERFNPQVNALVSLRPAEVLLAEADERDRERARGHSRGWMHGMPQAI 85 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD AT G+ T S + P ++ ++ +GA+++GK N+ EF +GS S + Sbjct: 86 KDLAATAGLRTTLGSPLFAEQVPEQDAISVARVRASGALIVGKSNVPEFGLGSQTYNSLF 145 Query: 139 GPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +T+ + G GSSGG++AA+A L + G+D GS+R PA+F Sbjct: 146 G---------TTTNAYDSGRVAGGSSGGAAAALAMRLLPVADGSDMMGSLRNPAAFNNVF 196 Query: 195 GIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G++P+ GR F L G + R+V D A LL AG D ++ D+ Sbjct: 197 GLRPSQGRVPHGPAPELFVQQLATEGPMGRSVVDVARLLSIQAGVDARVPLSLSEGRRDF 256 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 AL + +G+ VG +Y YL P D +S + A A E+ + PA Sbjct: 257 TDALQRDFRGVRVGWLGDYN-GYL-PMDDGV----MSLCESALADFAELGC-QVEACQPA 309 Query: 314 YYIISPAEASSNLARYDGVRYGLR---VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + +LAR R V G + + E + + G + Sbjct: 310 F----------DLARLWQCWLSHRHFLVHGNLGAAYADPAKRALLKPEAQWEVEGGLQMS 359 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 ++ Y + R+ R L K FE+ D +L P+ FP + ++G Sbjct: 360 AAALYQASLDRSDWYRALAK-----LFER-YDFLLLPS--AQVFPFDARQPWPTAVGGRA 411 Query: 431 NDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 D + + +AGLP+ISVP +P+GLQ+IG Sbjct: 412 MDTYHRWMEVVIGPTLAGLPSISVPVGFNAGGLPMGLQIIG 452 >gi|27380714|ref|NP_772243.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27353879|dbj|BAC50868.1| glutamyl-tRNA amidotransferase subunit A [Bradyrhizobium japonicum USDA 110] Length = 473 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 117/481 (24%), Positives = 209/481 (43%), Gaps = 48/481 (9%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 R+K S E+++ + + + A AR AA+ S R G+ L+G+P Sbjct: 26 RAKQFSPSEVLEDVLTHVAAWEPHLRALYAFDPDGAREAAKASTARWTGGEPSGPLDGVP 85 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD ATKG+ + + ++ +L + GA++ K M ++ M SS + Sbjct: 86 VTVKDNIATKGVPVPLGAASVKLVPAEKDAPPAARLREAGAIIFAKTTMPDYGMLSSGLS 145 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S++ +PW + PGGSS G+ AA A +GTD GGS+R PA + G VG Sbjct: 146 SFHALARNPWDLSKN-----PGGSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGLVG 200 Query: 196 IKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-PD 252 +KP++GR + P+ AG +TRTV D A+++ AIA D D ++LP P Sbjct: 201 LKPSFGR------VPIDPTYVGRVAGPMTRTVDDCALMMSAIAKPDRRDG--MSLPAEPL 252 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 + ++S + + +G+ + DAG + P A+ Sbjct: 253 NWKGPEKSPRKLRIGL-----------------------MLDAGVGL-PAERPVRDVAVK 288 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDIL---EMYENTRSIGFGQEVKHRIMIGTYV 369 A A S + DG+ ++G D M+++ + ++ K I + Sbjct: 289 AAKAFE--SAGSVVTEVDGILTREMLDGLDNFWRARMWDDLSKLTPAEQAKVLPYIFKWG 346 Query: 370 LS-SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 S ++ +R I+ ++ F + +D +++PT P +P + M Sbjct: 347 ASGAKLSGVDVIRGFNQTMAIRAAASKLFCE-LDYVISPTAPNVNYPADWASPTNDPMRP 405 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + +TV NM+ PA+S+ P+G+Q++G+ F + + + + E G R Sbjct: 406 FEHIAYTVPWNMSENPAVSLNGGFDANGFPIGVQIVGRRFDDIGVLGMAKAFEGLRGPQR 465 Query: 489 P 489 P Sbjct: 466 P 466 >gi|123933|sp|P06618|HYIN_PSESS RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|151292|gb|AAA25853.1| indoleacetamide hydrolase [Pseudomonas syringae] gi|224724|prf||1111323A hydrolase,indoleacetamide Length = 455 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 132/486 (27%), Positives = 215/486 (44%), Gaps = 57/486 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +I+A EL + + E +++N +I A + E+D + L G+P Sbjct: 14 LADGEIAAAELRERALDT-EARLARLNCFIR--EGDAVSQFGEADHAM---KGTPLWGMP 67 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + KD +G+ A + + GF ++ + +L GAV+ GK NM E + G ++ Sbjct: 68 VSFKDNICVRGLPLTAGTRGMSGFVSDQDAAIVSQLRALGAVVAGKNNMHELSFGVTSIN 127 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++G V +P + GGSSGGS+AAVA + S+GTDTGGSIR PA+F G G Sbjct: 128 PHWGTVGNP-----VAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAFCGITG 182 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC-----DATC-VNLP 249 +PT GR S GII + + D G++TRT D+ L ++G + A C + LP Sbjct: 183 FRPTTGRWSTAGIIPVSHTKDCVGLLTRTAGDAGFLYGLLSGKQQSFPLSRTAPCRIGLP 242 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 V + LD ++ V R + G +++ A IVE++ T + Sbjct: 243 VSMWSD-LDGEVERACVNALSLLR------------KTGFEFIEIDDADIVELNQTLT-F 288 Query: 310 ALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +P Y + A++ +L G+ + I ++ G + H + G Sbjct: 289 TVPLYEFFADLAQSLLSLGWKHGIHH--------IFAQVDDANVKGI---INHHLGEGAI 337 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 +HYL + + L+KR E F ++++ PT P L + Sbjct: 338 ------KPAHYLSSLQNGELLKRKMDELFARHNIELLGYPTVPCRVPHLDHADRPEFFSQ 391 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 I N T + A LP+I++P E ++P+GL R+ L S IE+ G+ Sbjct: 392 AIRN---TDLASNAMLPSITIPVG-PEGRLPVGLSFDALRGRDALLLSRVSAIEQVLGFV 447 Query: 488 R---PH 490 R PH Sbjct: 448 RKVLPH 453 >gi|260466559|ref|ZP_05812748.1| Amidase [Mesorhizobium opportunistum WSM2075] gi|259029708|gb|EEW30995.1| Amidase [Mesorhizobium opportunistum WSM2075] Length = 457 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 124/494 (25%), Positives = 212/494 (42%), Gaps = 74/494 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 + ++ ISAVE +D+++ I++ N +NA + + + AR A+++D ++ G+A L G+ Sbjct: 15 IAARKISAVEALDAHLAQIDSHNEAVNAVVSLDREGARERAKKADAALVRGEALGPLHGV 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD T G+ T + + V +L G V++ K N+ + Sbjct: 75 PFTLKDMHETAGMKTTVGFPPFADYVAKEDGPVAGRLKAAGGVLMAKTNVASMLSDWQSN 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW +++ T + GG++ +A + F +GTD SIR PA+F G Sbjct: 135 NPLFGRTSNPW-NLERTSGGSSGGAAAAIAAGMTPF----DVGTDMQDSIRLPAAFCGVY 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQA---------GIITRTVRDSAILLKAIAGYDECDATC 245 G+KPT R S G +F D A G + R+V D +++ + IAG D D Sbjct: 190 GLKPTEHRVSLAG--AFPNPGDAARSVRLMSCVGPLARSVDDLSLIYRIIAGSDGRDTDL 247 Query: 246 VNLPVPDYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +PV D + ++++ P D + ++ +Q L+ AGA + + +L Sbjct: 248 APVPVEDMPKLELKTLRIAFAPTFPGFPVTDAIGSAVENIARQ----LQSAGATVEKANL 303 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + +LA+ G G+ +E E T Sbjct: 304 PKL-------------DLHDDLAQ-GGALIGMMMEAAQPEPPDEPTP------------- 336 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-------PLG 417 SR +++ R R I L F E D +L P T+AF P+ Sbjct: 337 ------VSRWFEALARRDRSI--LAWNQFLEKH----DALLCPVAMTTAFSHCEPGTPIK 384 Query: 418 KE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + ++ S M Y VF N +G PA+S+P +P+GLQL+G+ + E L + Sbjct: 385 VDGKDQSYWMLPAYGAVF----NYSGHPALSMPCGQNSDGLPIGLQLVGRRWSESRLLGI 440 Query: 477 GQIIEKEAGYF-RP 489 + + G F RP Sbjct: 441 ARAMTPLTGGFSRP 454 >gi|294650447|ref|ZP_06727807.1| amidase [Acinetobacter haemolyticus ATCC 19194] gi|292823667|gb|EFF82510.1| amidase [Acinetobacter haemolyticus ATCC 19194] Length = 608 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 123/468 (26%), Positives = 195/468 (41%), Gaps = 63/468 (13%) Query: 27 VDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 +D+ + + + Q NA+I E + Q+ + E + + L G+P +KD Sbjct: 25 LDTLKDLVASIDPQDNAWISIATVEQIEQQIQVLNELTKEAESLAKQFPLYGVPFAVKDN 84 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G T A L TV + L GA+++GK N+D+FA G S +G V Sbjct: 85 IDVAGFVTTAACKALTTVAAQDAETV-RLLKQAGAIVVGKTNLDQFATGLVGTRSPFGAV 143 Query: 142 ISPWRSMDSTDKFTP-----GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 T+ F P G SSG +S GF+ A +GTDT GS R PA+F VG+ Sbjct: 144 ---------TNSFKPEYVSGGSSSGSASVVARGFVPFA-LGTDTAGSGRVPAAFNNIVGL 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP--VPDYE 254 KPT GR S G++ SLD I T V D+ ++ + YD D+ P VP + Sbjct: 194 KPTKGRFSNRGLLPACKSLDCISIFTLIVADADLVANVLEAYDPLDSYSRKHPKNVPAHF 253 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + IP++ + +K +QQ I L+ A+I +I + Sbjct: 254 SS------KLKFAIPEKLNF-FGDEQAEKAFQQTIQLLESLNAEITKIDFSDFE------ 300 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + ++ L Y G R +D+L+ S F V I G + Sbjct: 301 ------QLAAQL--YQGSWVAERTAAVEDLLK----ANSDAFDPTVLEIIKNGEKYSAVD 348 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGSMGHIY 430 Y++ YL K+D T +Q + D ++ PT PT ++N H+ Sbjct: 349 AYNAEYL---------KQDLTRKIQQKLADFDALIVPTAPTIYTIEQLQQNPIEYNAHL- 398 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +T N+A L A+++PA +P G+ LI + + L G+ Sbjct: 399 -GTYTNFTNLADLSALALPAGFRADHLPFGITLIATAWHDAALVHFGK 445 >gi|256787540|ref|ZP_05525971.1| putative amidase [Streptomyces lividans TK24] gi|289771435|ref|ZP_06530813.1| amidase [Streptomyces lividans TK24] gi|289701634|gb|EFD69063.1| amidase [Streptomyces lividans TK24] Length = 467 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 126/484 (26%), Positives = 210/484 (43%), Gaps = 35/484 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + + D R S VE + ++ E ++NA++ + ++A A + Sbjct: 1 MTDLTELTAVQLVDGYRKGAFSPVEATRAVLERAERIQPEVNAFVRLTGEEALDQARRAA 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVM 118 +R G+ L+G+P+ +KD T+G T S + P E + +L ++GAV Sbjct: 61 ERWRRGEPCGRLDGVPVTVKDILLTRGQPTLRGSRAVSPDGPWDEDAPSVARLREHGAVF 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK E+ ++ G +P T GGSSGG++AAVA ++GT Sbjct: 121 VGKTTTPEYGWKGVTDSPLSGVTRNP-----HDPSRTAGGSSGGAAAAVALGAGPLALGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PASF G G+KPTYGR +F +L G +TR D+A++L + Sbjct: 176 DGGGSVRIPASFCGIFGLKPTYGRVPLYPASAFG-TLAHVGPMTRDAADAALMLDVVGTP 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + + Y AL ++G+ V P + P + ++ + L + GA Sbjct: 235 DARDWSALGPASGSYTEALSGGVRGLRVAYSPTLGGQVAVRPAVAGAVRRAVERLAELGA 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + E P + A++ + S AR V LR +++L+ Sbjct: 295 YVTEAD-PDFTDPVDAFHTLW----FSGAAR---VVQHLRAGQRELLDP----------- 335 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 R ++G +R YL A +R + R F D+++TPT P +AF G Sbjct: 336 --GLREIVGA---GARYSALDYLAAVDVRMELGRRMG-VFHGSYDLLVTPTLPVTAFEAG 389 Query: 418 KE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E SG FT N+ PA +VP +P+GLQ++ R++ + Sbjct: 390 VEVPKGSGYRRWTGWTPFTYPFNLTQQPAATVPVGTDGDGLPVGLQIVAARHRDDLVLRT 449 Query: 477 GQII 480 + Sbjct: 450 AHAL 453 >gi|326490277|dbj|BAJ84802.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 501 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 93/296 (31%), Positives = 144/296 (48%), Gaps = 16/296 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 R+ +S+ LV Y+ I+ N ++A IEV R A +R L G+P Sbjct: 39 FRNGSLSSAALVRFYLDQIDRLNPLLHAVIEVNPDALRQANRADAERRRRTATGTLHGVP 98 Query: 76 IGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE---FAMGS 131 + +KD AT ++T A S L G ++ V +L GAV+LGK ++ E F + Sbjct: 99 VLLKDNIATHDALNTTAGSLALLGSVVKRDAGVVARLRRAGAVVLGKASLSEWANFRIVK 158 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++ G +P+ +P GSS GS A A L A ++GT+T GSI P+SF Sbjct: 159 DGWSARGGQARNPY-----VLSASPCGSSAGSGVAAAANLAAVTLGTETDGSILCPSSFN 213 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 VGIKPT G SR G++ +P D G + RTV D+ +L AI GYD+ DA Sbjct: 214 SVVGIKPTLGLTSRAGVVPISPRQDTVGPMCRTVSDAVHVLDAIVGYDKLDAAATRAASK 273 Query: 248 -LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +P Y + L + ++G +G+P E ++Q ++ ++ GA ++E Sbjct: 274 FIPRGGYLQFLKKDGLRGKRIGVPNEL-FQGFGEKQTSVYKQHLATMRKYGAMVIE 328 >gi|255973819|ref|ZP_05424405.1| glutaminyl-tRNA synthase [Enterococcus faecalis T2] gi|307284502|ref|ZP_07564664.1| amidase [Enterococcus faecalis TX0860] gi|255966691|gb|EET97313.1| glutaminyl-tRNA synthase [Enterococcus faecalis T2] gi|306503179|gb|EFM72433.1| amidase [Enterococcus faecalis TX0860] Length = 528 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 126/475 (26%), Positives = 220/475 (46%), Gaps = 61/475 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQASQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALVLGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSGASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ ++ L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFRAAKKALQKAGAEVI 352 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 ++ P + + +IS E L ++ RY L + + L Y Q+ K Sbjct: 353 PVT-PDME-GIDGGAVIS-NEFKFALEKF-AKRYDLPFKTLEELIAYNQ-------QDKK 401 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R G +L + + I+T IK+ +Q D +L K++ Sbjct: 402 VRAKYGQDLLEADVKKKQPDK-EIIQTTIKKA-----QQTFDALLK-----------KQQ 444 Query: 421 NNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + G+ + D ++ +AG P ++VP A + P GL +E+TLF Sbjct: 445 LD----GYAFIDSEGTGLSAVAGYPELTVPLAKNSEGQPYGLTFTQTANKEQTLF 495 >gi|77462031|ref|YP_351535.1| amidase [Rhodobacter sphaeroides 2.4.1] gi|77386449|gb|ABA77634.1| Amidase [Rhodobacter sphaeroides 2.4.1] Length = 436 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 117/450 (26%), Positives = 184/450 (40%), Gaps = 59/450 (13%) Query: 44 YIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 Y + +AR A + +R G R L+G+P+ KD F T G+ T+A S +L G P Sbjct: 38 YARLCPTRARTEAMAAAERAKRGLRRGPLDGVPVSWKDLFDTAGVATEAGSALLKGRVPA 97 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSS 160 ++ V G V LGK +M E A N + P ++ D G S Sbjct: 98 EDAAVLGTATLGGLVCLGKTHMSELAFSGLGLNPVTATPPCVN--------DPAAVAGGS 149 Query: 161 GGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 +AA F L A+IG+DTGGS+R PA++ G+K T GR S G + A D G Sbjct: 150 SSGAAASVAFGLAPAAIGSDTGGSVRIPAAWNDLAGLKTTAGRLSLAGTVPLAARFDTVG 209 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + RTV D A+LL + G D S+ G + + L+ L Sbjct: 210 PLARTVEDCALLLAMLEGGRPADLG-------------GASLAGRRFLVLETLALEDLRE 256 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + +++ ++ L AGA+I + P A+ + EA + A Sbjct: 257 APARGFEEAVARLARAGARIERGTAPEVVEAMAMAGPLFTGEAYATWA------------ 304 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 E+ E + F + R G + + + + + R +R A Sbjct: 305 -----EVIEGAPDLMF-PRILERFRSGASITAVE-FVTAWQRLEALRAAWA-----ARTA 352 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEK 455 G D +L PT+P P E + ++ ++ T N+ GLPA+++P Sbjct: 353 GYDAVLVPTSPI--LPPDAERLLTDESYYVGENLLALRNTRIANLMGLPALTLPTG---- 406 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + G+ L+GQP EE L +G E+ G Sbjct: 407 QPSCGISLMGQPMGEERLLRLGAAAERALG 436 >gi|20150038|gb|AAM12940.1| MupX [Pseudomonas fluorescens] Length = 512 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 137/528 (25%), Positives = 224/528 (42%), Gaps = 98/528 (18%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ +A++E +R K+++ +ELV + +Q I+ N +NA + ++ ++A+A E Sbjct: 12 QLDGIALAE---MVRLKEVTPLELVSAAVQRIDAGNGAINAVVHLLEREAKAQCEVP--- 65 Query: 63 IINGDARDLEGIPIGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + +G L G+P+ +KD A +G T+ S + + +S ++ G + +GK Sbjct: 66 LADGP---LSGVPLLVKDLLAEIQGCPTRNGSRLFAHYVAREDSQTIKRYRQAGLIFVGK 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E + E+ G +PW + +PGGSSGG+ AAVA + + G+D G Sbjct: 123 TATPELGLHPYTESDATGATRNPWNL-----ELSPGGSSGGACAAVAAGMTPIAHGSDGG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLG--IISFAPSLDQAGIITRTVRDSAILLK-AIAGY 238 GSIR PAS G G+KPT GR S G L ++++VRDSA +L IAG Sbjct: 178 GSIRLPASHCGVFGLKPTRGR-SPCGPHFSELWQGLVVEHAVSKSVRDSAAMLDILIAGS 236 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGI---PKEYRLDY---------LSPTIDKTWQ 286 D+ DA P P Q GI P R+ Y LSP + Sbjct: 237 DDADA--YRWPAP---------AQSFLAGIGDAPGRLRIAYTFKPFLGGDLSPDCRAALE 285 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 + L D G ++VE P + SP + + L + ++ + Sbjct: 286 SSLKLLTDLGHEVVEAHPP----------LASPDQLCEAM---------LTLVCGEMASL 326 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL------RARKIRTLIKRDFTEAFEQG 400 +N + GT+ L+ + H L RAR++ L + AF + Sbjct: 327 VQNAGRMLDRVATYADFESGTWALARQ---GHILKAVDLARAREL-ALHQGRIMSAFHEH 382 Query: 401 VDVILTPT-----TPTSAFPLGKEENN-----SGSMG-----HIYNDV------------ 433 DV++TP + AF L E+ G G + N + Sbjct: 383 YDVLVTPVANQLASKVGAFRLSPLEDRLSRRVLGKWGMDWPLRLGNRLAEHSRTVMEYMG 442 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 ++ NM+G PA+SVP E +P+G Q I + E L + + +E Sbjct: 443 WSTPFNMSGQPAMSVPLYWNETGLPIGTQFIAKMGNEALLLQLARSLE 490 >gi|13474461|ref|NP_106029.1| amidase [Mesorhizobium loti MAFF303099] gi|14025214|dbj|BAB51815.1| probable amidase [Mesorhizobium loti MAFF303099] Length = 457 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 132/503 (26%), Positives = 210/503 (41%), Gaps = 75/503 (14%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F + E + + ISAVE +D+++ I+ N +NA I + + A A ++D + Sbjct: 5 FSSTIELATAIARRKISAVEALDAHLAQIDRHNEGVNAVISLDREGAYECARKADAALAR 64 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G L G+P +KD T G+ T + ++S V +L G V++ K N+ Sbjct: 65 GATPGPLHGVPFTLKDMHETSGMKTTVGFPPFADYVASHDSPVVARLKAAGGVLMAKTNV 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + +G +PW +++ T + GG++ +AA+ F +GTD SI Sbjct: 125 ATMLSDWQSNNPLFGRTSNPW-NLERTAGGSSGGAAAAVAAAMTPF----DVGTDMQDSI 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA---------GIITRTVRDSAILLKAI 235 R PA+F G G+KPT R S G +F D A G + R V D +++ + I Sbjct: 180 RLPAAFCGVYGLKPTEHRVSLAG--AFPNPGDAARSVRLMSCLGPLARGVDDLSLIYQII 237 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 AG D D +PV + +++ + + + ++ I ++ L+DA Sbjct: 238 AGPDGRDTDLAPVPVVAMPKL---NLKTLRIAFAPSFPGFPVAGDIGVAVEKLARQLQDA 294 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 GA + + LP NL D + G G I M E + Sbjct: 295 GAIVADAKLP-------------------NLDLRDDLAQG----GALIGVMMEAAQP--- 328 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 E R T V SR +++ R R I T + F D +L P T+AFP Sbjct: 329 --EPPER---PTPV--SRWFEALARRDRSILTW------DQFFDNYDALLCPVAMTTAFP 375 Query: 416 L----------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 GK+++ M Y VF N +G PA+S+P +P+GLQL+G Sbjct: 376 HCEPGTPIKVDGKDQDY--WMLPAYGAVF----NYSGHPALSMPCGEDRDGLPIGLQLVG 429 Query: 466 QPFREETLFSVGQIIEKEAGYFR 488 + + E L V IE G FR Sbjct: 430 KRWSEARLLGVAAAIEPLTGGFR 452 >gi|163747049|ref|ZP_02154405.1| amidase [Oceanibulbus indolifex HEL-45] gi|161379610|gb|EDQ04023.1| amidase [Oceanibulbus indolifex HEL-45] Length = 469 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 137/491 (27%), Positives = 220/491 (44%), Gaps = 52/491 (10%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDA 68 S+ + L ++ ISAVEL+ + + IE N ++NA + + + A A+ +D G Sbjct: 9 SDLSEALAARRISAVELMQATLARIEAVNGKVNAIVSLRDRDTLLAEAQAADASPRKG-- 66 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP+ IKD +G+ T S + G P + +L GA+ +GK N EF Sbjct: 67 -WLHGIPMAIKDLADAEGLPTSQGSPLF-GLEPATRDHPAVARLRAAGAIFIGKTNTPEF 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +GS +G +P+ S SSGG++AA+A L A + G+D GS+R P Sbjct: 125 GLGSHTFNPVHGATRNPYDLSRSAGG-----SSGGAAAALAARLVAVADGSDMMGSLRNP 179 Query: 188 ASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 A + G++PT+G S G F L G + R+ RD A LL + G D Sbjct: 180 AGWNNVYGMRPTWGTVPSDDGGDLFLHQLSTLGPMARSPRDLAALLDVMRGADPRQPLTH 239 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLP 305 + PD +D ++ +G ++ + +P I + ++ L G +++ I+ P Sbjct: 240 S--GPDTAPEIDAALSAQRIGWLGDWGGAFPCAPGIIDLSEAALNRLTGLGHEVMPIAAP 297 Query: 306 HTQYALPAYYII--SPAEASSNLARYD--GVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 A+ +I S A A+S YD R GL+ + +E R GF Sbjct: 298 FDADAMWESWITLRSFAVAASLGVIYDDPARRGGLKPAAQ-----WEVARGQGFST---- 348 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + RA IR+ R FE+ VDV++ P+ +P E+ Sbjct: 349 ---------------ADIQRASSIRSDWFRAAHALFEK-VDVLVLPS--AQVWPFDVEQV 390 Query: 422 NSGSM-GHI---YNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + GH+ Y+ V V ++ GLP ++VPA ++ +PLGLQLIG+ + L Sbjct: 391 HPAEINGHLMDTYHRWMQVVVPASLIGLPVVNVPAGFDQRGLPLGLQLIGKRGSDAQLLQ 450 Query: 476 VGQIIEKEAGY 486 + Q K GY Sbjct: 451 LAQGWHKATGY 461 >gi|126460921|ref|YP_001042035.1| amidase [Rhodobacter sphaeroides ATCC 17029] gi|126102585|gb|ABN75263.1| Amidase [Rhodobacter sphaeroides ATCC 17029] Length = 441 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 116/450 (25%), Positives = 184/450 (40%), Gaps = 59/450 (13%) Query: 44 YIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 Y + +AR A + +R G R L+G+P+ KD F T G+ T+A S +L G P Sbjct: 43 YARLCPTRARTEAMAAAERAKRGLRRGPLDGVPVSWKDLFDTAGVATEAGSALLKGRVPE 102 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSS 160 ++ V G V LGK +M E A N + P ++ D G S Sbjct: 103 EDAAVLGTATLGGLVCLGKTHMSELAFSGLGLNPVTATPPCVN--------DPAAVAGGS 154 Query: 161 GGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 +AA F L A+IG+DTGGS+R PA++ G+K T GR S G + A D G Sbjct: 155 SSGAAASVAFGLAPAAIGSDTGGSVRIPAAWNDLAGLKTTAGRLSLAGTVPLAARFDTVG 214 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + RTV D A+LL + G D S+ G + + L+ L Sbjct: 215 PLARTVEDCALLLAVLEGGRPADLR-------------GASLAGRRFLVLETLALEDLRE 261 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + +++ ++ L AGA+I + P A+ + EA + A Sbjct: 262 APARGFEEAVARLARAGARIERGAAPEVVEAMAMAGPLFTGEAYATWA------------ 309 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 E+ E + F + R G + + + + + R +R A Sbjct: 310 -----EVIEGAPDLMF-PRILERFRSGASITAVE-FVTAWQRLEALRAAWA-----ARTA 357 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEK 455 G D +L PT+P P + + ++ ++ T N+ GLPA+++P Sbjct: 358 GYDAVLVPTSPI--LPPDAKRLLTDESYYVGENLLALRNTRIANLMGLPALTLPTG---- 411 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + G+ L+GQP EE L +G E+ G Sbjct: 412 QPSCGISLMGQPMGEERLLRLGAAAERALG 441 >gi|297183865|gb|ADI19987.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit and related amidases [uncultured gamma proteobacterium EB000_65A11] Length = 473 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 122/481 (25%), Positives = 204/481 (42%), Gaps = 59/481 (12%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR-AAAEESDKR 62 +N+ + S ++ ++IS EL+ + IE N NA + + A E+D Sbjct: 1 MNYASASTLSRQIADREISCTELMQDTLDNIERINPVYNAIVSISDHSMLLTQAREADSA 60 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ R + G P IKD +G T S +L ++ T+++ + GA+ +GK Sbjct: 61 LAKGEYRGWMHGFPHAIKDLANCEGYVTSCGSPLLANNVAGDDAIFTRRIREAGAIFIGK 120 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP----GGSSGGSSAAVAGFLCAASIG 177 N+ EF +GS + + +G + + F P GGSSGG++ A+A L + G Sbjct: 121 TNVPEFGLGSQSYNTLHG---------STRNAFNPALCAGGSSGGAAVALALDLLPVADG 171 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GS+R PA++ VG +P+ GR + F SL G + R V D L +AG Sbjct: 172 SDMMGSLRNPAAYNNVVGFRPSLGRVPKSEGDLFTGSLSTEGPMGRHVEDVIKLFLTMAG 231 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 PD L S +G G P+EY+ L + I WL D G Sbjct: 232 -------------PDTRSPL--SWRG-NPGSPEEYKPLSLE-------HKSIGWLADLGG 268 Query: 298 KIVEIS--LPHTQYALPAY----YIISPAEASSNLARYDGVRYGLRVEG--KDILEMYEN 349 + + LP + AL + I + N+ LR G +++N Sbjct: 269 HLSTEAGLLPLCEGALQSLGSTGIHIEHSHLEFNMEALWDCWITLRQWGLTNSPNRLFKN 328 Query: 350 TRS-IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 ++ I EV+ + + + R + R+R +T+ AF Q D + P+ Sbjct: 329 PKTRIQLKPEVQWELDQAETITTDRLALAFDTRSRWYQTI-----NSAFGQ-YDFLALPS 382 Query: 409 TPTSAFPLGKE-----ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 F + + E S H + +V + ++G P IS+PA L ++ P+G+Q Sbjct: 383 AQVFPFDVAQHWPAEIEGRKMSTYHQWMEV-VIGGTLSGCPVISLPAGLDDQHRPMGIQF 441 Query: 464 I 464 I Sbjct: 442 I 442 >gi|239834382|ref|ZP_04682710.1| 6-aminohexanoate-cyclic-dimer hydrolase [Ochrobactrum intermedium LMG 3301] gi|239822445|gb|EEQ94014.1| 6-aminohexanoate-cyclic-dimer hydrolase [Ochrobactrum intermedium LMG 3301] Length = 477 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 123/481 (25%), Positives = 204/481 (42%), Gaps = 48/481 (9%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + +R+K +S E V AI+ N ++NA I + R AEE K + G L G Sbjct: 18 EAIRAKILSPHEAVHEAFAAIDRCNPKLNAVI----HEMRDQAEEQLKSLPAG---PLSG 70 Query: 74 IPIGIK-DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ +K DC + G +G + + ++ G V++GK N+ EF+ + Sbjct: 71 VPVLLKDDCPSYAGAAMSFGCRAAEGNISQRDHELVKRYKSAGLVVVGKTNLPEFSCNIA 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+S +GP ++PW S SSGG++AAVA + + G D GSIR PA G Sbjct: 131 TESSLHGPALNPWNVTRSIGG-----SSGGAAAAVAARMVPVAYGNDGAGSIRIPAFCGG 185 Query: 193 TVGIKPTYGR--CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G++P+ GR C + ++ + ++TR+VRDSA++L + Sbjct: 186 LFGLRPSRGRVPCGPVSTENWGGMVSHH-VLTRSVRDSAMMLDLTDALEPGSLYAAPAKT 244 Query: 251 PDYERALDQSIQGMTVGI--PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + ++ + + + +G+ + R D T+ + I+ K G IV + Sbjct: 245 DLFVNSVKMAPRKLRIGVWQKSDLRRDVDEQTV-AALEATIALCKQLGHSIVRVK----- 298 Query: 309 YALPAYYIISPAEASSNL-ARYDGVRYG--LRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 P + + A+A L A Y + K ++Y ++G Sbjct: 299 ---PDFDGVQLADAVQKLIAVYTAIEVTDVATTMAKPANDLYFEPSNLGLA--------- 346 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG- 424 + + ++AR R F FE+ DV+L+P P +FPLG + S Sbjct: 347 ---AYGNGLTATEVIQARLTANGTARSFGRLFEE-CDVVLSPVMPVGSFPLGMLDVRSPD 402 Query: 425 ----SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + + FT VN AGLPA+SVP +P+G Q I E LF + + Sbjct: 403 WKGFARQFLELTTFTHPVNAAGLPAMSVPLHETSDGLPIGSQFIAPYGAENLLFELAGQL 462 Query: 481 E 481 E Sbjct: 463 E 463 >gi|126724350|ref|ZP_01740193.1| Amidase [Rhodobacterales bacterium HTCC2150] gi|126705514|gb|EBA04604.1| Amidase [Rhodobacterales bacterium HTCC2150] Length = 443 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 114/224 (50%), Gaps = 12/224 (5%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPI 76 S +I V+L +Y++AIE Y + A AE + +R G R L+G+PI Sbjct: 19 SGEIDPVDLTQTYLEAIEVHEFSSRIYARTTVDRVLAEAEAASERAKAGLRRSPLDGVPI 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 KD F T G +A S +L G P ++ V + G V LGK +M E A Sbjct: 79 SWKDLFDTSGTICEAGSDLLSGRVPTTDAEVVKNATAAGLVGLGKTHMSELA-------- 130 Query: 137 YYGPVISPWRSMD---STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + G ++P + + GGSS G++ +VA L AA IG+DTGGS+R PA++ Sbjct: 131 FSGLGVNPVKETSPCVNDHSAVAGGSSSGAATSVAFGLAAAGIGSDTGGSVRIPAAWNDL 190 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 VG+K T GR S G++ S D G + R+V D+ ++L A+ G Sbjct: 191 VGLKTTSGRLSLKGVVPLCASFDTVGPLCRSVEDANLMLAALEG 234 >gi|312217248|emb|CBX97196.1| hypothetical protein [Leptosphaeria maculans] Length = 699 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 27/322 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNS--QMNAYIEVVAQKARAAAEESDKRIIN 65 ++ + R+ L S+ +++++L +Y+ I ++ +NA+ ++ K A SD R Sbjct: 23 SIEQHREALESRKVTSIDLAVAYMNRIATYDTCGGLNAFT-IINPKVFEEATASDARRSQ 81 Query: 66 GDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G A R LEGIP IKD + G+ S L G +S + +KL GAV+LGK NM Sbjct: 82 GLAPRALEGIPYAIKDSYKVAGMSVTNGSPALKGVMSSKDSAIAEKLRAAGAVLLGKTNM 141 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 A G + YG SP+ S T F+ GSS G++ +VA + A +G++T S Sbjct: 142 PPMAAGGM-QRGMYGRAESPYNSRYLTGAFS-SGSSNGAATSVAASMAAFGMGSETVSSG 199 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA- 243 R PAS G V P+ G S G+ + D R+V D LL IA D+ A Sbjct: 200 RSPASNNGLVCYTPSKGLLSCRGLWPLYITCDVPSPYARSVSDMMDLLTVIATPDDDTAG 259 Query: 244 ------TCVNLPVP---DYERALD-QSIQGMTVGIPKEY----------RLDYLSPTIDK 283 + +P P DY + +++G +G+P Y + ++S + + Sbjct: 260 DFIREQRHIAVPKPQAIDYNSLKNTDALRGKRIGVPNLYVGKKDSDPYAKPTFVSEEVIE 319 Query: 284 TWQQGISWLKDAGAKIVEISLP 305 W++ L+ GA++V P Sbjct: 320 LWKKAAKDLEALGAEVVYTDFP 341 >gi|21221275|ref|NP_627054.1| putative amidase [Streptomyces coelicolor A3(2)] gi|14799971|emb|CAC44288.1| putative amidase [Streptomyces coelicolor A3(2)] Length = 467 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 126/484 (26%), Positives = 211/484 (43%), Gaps = 35/484 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + + D R S VE + ++ E ++NA++ + ++A A ++ Sbjct: 1 MTDLTELTAVQLVDGYRKGAFSPVEATRAVLERAERIQPEVNAFVRLTGEEALDQARRAE 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVM 118 +R G+ L+G+P+ +KD T+G T S + P E + +L ++GAV Sbjct: 61 ERWRRGEPCGRLDGVPVTVKDILLTRGQPTLRGSRAVSPDGPWDEDAPSVARLREHGAVF 120 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK E+ ++ G +P T GGSSGG++AAVA ++GT Sbjct: 121 VGKTTTPEYGWKGVTDSPLSGVTRNP-----HDPSRTAGGSSGGAAAAVALGAGPLALGT 175 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PASF G G+KPTYGR +F +L G +TR D+A++L + Sbjct: 176 DGGGSVRIPASFCGIFGLKPTYGRVPLYPASAFG-TLAHVGPMTRDAADAALMLDVVGTP 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D + + Y AL ++G+ V P + P + ++ + L + GA Sbjct: 235 DARDWSALGPASGSYTEALSGGVRGLRVAYSPTLGGQVAVRPAVAGAVRRAVERLAELGA 294 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + E P + A++ + S AR V LR +++L+ Sbjct: 295 YVTEAD-PDFTDPVDAFHTLW----FSGAAR---VVQHLRAGQRELLDP----------- 335 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 R ++G +R YL A +R + R F D+++TPT P +AF G Sbjct: 336 --GLREIVGA---GARYSALDYLAAVDVRMELGRRMG-VFHGSYDLLVTPTLPVTAFEAG 389 Query: 418 KE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E SG FT N+ PA +VP +P+GLQ++ R++ + Sbjct: 390 VEVPKGSGYRRWTGWTPFTYPFNLTQQPAATVPVGTDGDGLPVGLQIVAARHRDDLVLRT 449 Query: 477 GQII 480 + Sbjct: 450 AHAL 453 >gi|68484977|ref|XP_713627.1| likely multifunctional urea amidolyase [Candida albicans SC5314] gi|68485048|ref|XP_713590.1| likely multifunctional urea amidolyase [Candida albicans SC5314] gi|46435095|gb|EAK94485.1| likely multifunctional urea amidolyase [Candida albicans SC5314] gi|46435133|gb|EAK94522.1| likely multifunctional urea amidolyase [Candida albicans SC5314] Length = 1813 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 117/438 (26%), Positives = 191/438 (43%), Gaps = 45/438 (10%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 A IE + + + +S+KR + L G+PI +KD K T A + P Sbjct: 47 ASIENLEHQWKFLQSKSNKRDL-----PLYGVPIAVKDNIDAKTFETTAACPSF-AYSPS 100 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 ++T + L D GA+++GK N+D+FA G S YG I+P K+ GGSS G Sbjct: 101 KDATTVRLLRDAGAIVIGKTNLDQFATGLVGTRSPYG--ITP---NTFNPKYVSGGSSAG 155 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S++ VA + ++GTDT GS R PA+ +G+KPT G S G++ SLD I Sbjct: 156 SASVVARGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGVFSCSGVVPACKSLDCVSIFA 215 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 ++D+ + +A DE D ++P + L + + V +P L Y Sbjct: 216 LNLQDAQLTFNIMAEEDEHDEFSRSMP----KNPLLKFGKKPRVVVPTNL-LWYGEKENP 270 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLR-VE 339 K +Q+ ++ + G ++V + + E LAR Y+G R V Sbjct: 271 KLYQEAVAKFEKIGCELVSLDI----------------EPLLELARCLYEGPWVAERYVA 314 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 KD N V I G + ++ C+ Y R + ++KR + Sbjct: 315 VKDFFAT--NPPEKDLDPTVTKIIKGGEHYSAATCFQYEYKR----QGIVKR--VNKLLE 366 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 G+D I+ PT P + P +E N + +T VN+A + A+++PA +P Sbjct: 367 GIDAIIVPTAPLN--PTIEEVTNEPIKVNSCQGTYTNFVNLADMSALAIPAGFRNDGLPF 424 Query: 460 GLQLIGQPFREETLFSVG 477 G+ L+ F + L + Sbjct: 425 GVTLLSHKFNDYALLDLA 442 >gi|307174935|gb|EFN65175.1| Fatty-acid amide hydrolase 2 [Camponotus floridanus] Length = 524 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 120/503 (23%), Positives = 216/503 (42%), Gaps = 63/503 (12%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEES---DKRIINGDA--- 68 ++R++ +++ E++ SYI+ I+ +N VVA++ + A EE+ D+ + + DA Sbjct: 53 KIRNRQLTSEEVISSYIERIKEIQPILNC---VVAERFKEALEEARKCDELLKSQDAPSA 109 Query: 69 ------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + L G+P KDC +H A I ++ V + + GA+ L Sbjct: 110 DLLAKEKPLFGVPFTTKDCIRMANMHQTAGLVIRKNIVADRDAEVIKLMRSAGAIPLALT 169 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E AM + +G +P+ + + GGSSGG A IG+D GG Sbjct: 170 NVSELAMWWESTNYLFGTTKNPYNT-----RHIVGGSSGGEGCIQAAAGSPLGIGSDIGG 224 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-----AGIITRTVRDSAILLKAIAG 237 SIR PA F G G KP+ G S G A S DQ G + R +D + LK +A Sbjct: 225 SIRMPAFFNGIFGHKPSKGIVSNDGQYPSAHSDDQDQLLAIGPMCRYAQDITLTLKILAN 284 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGI------PKEYRLDYLSPTIDKTWQQGISW 291 + V+L LDQ + + I +Y + + P I ++ + + Sbjct: 285 KN------VDL------LKLDQKVDISQIKIYYMEDDGGQYLISPVDPEIKDAMRRILKY 332 Query: 292 LKDAGA-KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 + A K ++S+ + + + A+ + + Y L I +E Sbjct: 333 FEKAHKIKATKLSIKKLKKGIALWMANMTAKDEKDFS------YELTNRKGHINIWWEFV 386 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK-RDFTEAFEQ--GVD-VILT 406 + + F + ++ + + Y IR + + +D + F+ G D V L Sbjct: 387 KWMLF---MSDHTLVALLTAAFERFGIKYGSEEHIRLMQQSKDLRQEFKDILGEDGVFLY 443 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 PT PT+A P+ E + +N +T +N+ GLPA + P L ++ +P+G+Q++ Sbjct: 444 PTHPTAA-PMHYE-----PLFKPFNFSYTAIINVLGLPATACPLGLNKQGLPIGIQVVAG 497 Query: 467 PFREETLFSVGQIIEKEAGYFRP 489 ++ +V + +E+ G + P Sbjct: 498 LHQDRLTLAVAEELERGFGGWVP 520 >gi|170940156|emb|CAP65383.1| unnamed protein product [Podospora anserina S mat+] Length = 481 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 102/284 (35%), Positives = 142/284 (50%), Gaps = 19/284 (6%) Query: 30 YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG-IH 88 Y+ IE N + A EV AAE R L GIPI IKD AT ++ Sbjct: 1 YLARIEQVNPLLRAVNEVNPDALDIAAELDAMRANGTTLGPLHGIPILIKDNIATADKMN 60 Query: 89 TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVIS 143 A S L G + ++ST+ KL GA++LGK N+ ++A SS ++Y G Sbjct: 61 NTAGSFALVGAKVPHDSTMAVKLRAAGAIILGKANLSQWANYRSSNSSSGWSAYGGQATG 120 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 + + PGGSS GS A + LC A++GT+T GSI P+ VGIKPT G Sbjct: 121 AYYPNED-----PGGSSSGSGVAASIGLCLATLGTETSGSIISPSQKGSLVGIKPTVGLT 175 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-----VPDY-ERAL 257 SR +I + D G + RTV+D+AI+L+AIAG+D D +P +PDY Sbjct: 176 SRYLVIPISSHQDTIGPMARTVKDAAIILQAIAGHDPRDNYTSTIPWEDSKIPDYVSALS 235 Query: 258 DQSIQGMTVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIV 300 S+ G +GIP L+ + T++ T + I +K AGA IV Sbjct: 236 ASSLSGARIGIPYN-TLNPNASTVEMTAFWSAIDTMKSAGATIV 278 >gi|296270499|ref|YP_003653131.1| amidase [Thermobispora bispora DSM 43833] gi|296093286|gb|ADG89238.1| Amidase [Thermobispora bispora DSM 43833] Length = 475 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 118/228 (51%), Gaps = 8/228 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ + E +RSK++S VE+ + Y++ IE + ++ A++ V A++A A E + Sbjct: 1 MAQIHDLTALEQAQAVRSKELSPVEITEHYLERIERLDRELGAFVTVTAERALDQAREQE 60 Query: 61 KRIINGDARDLE---GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 R++ DL G+P+ IKD K + S +GF + V ++L + G + Sbjct: 61 ARVLREPPEDLPPLLGVPVPIKDLNLVKDVPIYFGSATYEGFVAPVDDAVVERLREAGTI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 M+GK N EF + E + P +PW S SSGG++AAVAG L + G Sbjct: 121 MVGKTNTPEFGLPCYTEPAVCPPARTPWDLSRSAGG-----SSGGAAAAVAGGLAPVAHG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV 225 +D GSIR PAS G GIKP+ GR S II G I+RTV Sbjct: 176 SDGAGSIRIPASACGLYGIKPSRGRISSGPIIPDLAGFSTNGPISRTV 223 Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 12/148 (8%) Query: 356 GQEVKHRIMIGTYVLSSRCYD---SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +E +H++ T L R + +L+A+ L R +A + D +LTPT Sbjct: 329 AKENEHKLRPITAWLRERGHAVTAPEFLQAQASLQLTTRLALQATD-AYDAVLTPTLTQP 387 Query: 413 AFPLGKEENNSGSMGHIYN----DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P+G E FT N++G PA+++P ++ +P+G+ L G+ Sbjct: 388 PVPIGWFEEGDDPEQTFERMKRFAPFTAVYNVSGQPAVNLPLHWTDEGLPIGVMLAGRFG 447 Query: 469 REETLFSVGQIIEKEAGYF----RPHKW 492 E TL S+ IE G F RP W Sbjct: 448 DEGTLISLSAQIEAAVGGFWGDRRPSVW 475 >gi|119963957|ref|YP_946649.1| amidase [Arthrobacter aurescens TC1] gi|119950816|gb|ABM09727.1| putative amidase [Arthrobacter aurescens TC1] Length = 482 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 124/491 (25%), Positives = 210/491 (42%), Gaps = 64/491 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R K +SA E++ ++ I N +NA + + A A+A A +D+ +G L G+ Sbjct: 17 IREKKVSAREVLAEHLNRISEVNPVINAVVTLDADGAQALAHRADQLTASGAPLPPLHGV 76 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ KD T G+ T S L F P + + +L G + GK N+ EF GS Sbjct: 77 PMTHKDTNNTAGMRTTQGSLALRDFVPDADDLIIARLKAAGVISTGKSNVPEFGAGSHTF 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +P+ + GGSSGG++A VA + + G+D GGS+R PASF V Sbjct: 137 NDLFGTTTNPY-----APTLSAGGSSGGAAAVVASRVQSIGDGSDMGGSLRIPASFCNVV 191 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G +P+ I+ L + G + R++ D A+ + AG D L + Sbjct: 192 GFRPSTAVIPMPSDINAYSWLGRTGPMARSIEDIALFMSVTAGKDPRIPHPAGLDPEVFR 251 Query: 255 RALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +L+ ++G+ +G +++ + + I ++ ++ +D GA IVE Sbjct: 252 SSLETDMRGVRIGWSRDFGIGVPVEAEILDHLERHLAIFEDLGA-IVE------------ 298 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF-----------GQEVK-- 360 EA+ + + D V + NTR++ F G VK Sbjct: 299 -------EATPDFSEADLV--------------FGNTRAMDFAAGLGPILERAGDVVKPE 337 Query: 361 -HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF--PLG 417 H + + L++R + R+ ++R E F + D+ +P F L Sbjct: 338 VHWNVNKGFALTAR----DLIETAAARSRLERSVQEFFGR-YDLFASPCAQVLPFDATLR 392 Query: 418 KEENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + +G Y D A ++ GLP +SVPA +P+GLQL G + + L Sbjct: 393 YPTDVAGVPSETYLDWMRSACLLSATGLPVLSVPAGFSSIGLPIGLQLAGNHYTDMQLLR 452 Query: 476 VGQIIEKEAGY 486 G+ E++ GY Sbjct: 453 YGRAFEQQTGY 463 >gi|296423527|ref|XP_002841305.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637542|emb|CAZ85496.1| unnamed protein product [Tuber melanosporum] Length = 615 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 119/508 (23%), Positives = 209/508 (41%), Gaps = 56/508 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ F + + + S ++ V +++ + + S ++ + A A S Sbjct: 102 MTSSVFNSSASYTAQFASGKLTPVTVINERLLPLFTSPKSPHSVCVITPVTPSAGASAST 161 Query: 61 KRIINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-------VTQKL 111 R A ++G+PI +KD F+ G + R Y ++ QKL Sbjct: 162 SRYAASTAHTSGIDGVPILVKDEFSLAGTPRTMGLTKAEMTRRAYSASEEGQTSWCVQKL 221 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 D GA+++GK NM E ++N +G +P+ SSGG + AV L Sbjct: 222 IDAGALVVGKANMHEIGFDTTNNNPNWGTPRNPYNKGYYPGG-----SSGGCAYAVGAGL 276 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 ++G D GGSIR PA++ G G+KPT+GR S +S A S G I T+ D + Sbjct: 277 VPIAVGADGGGSIRIPAAYCGVYGLKPTHGRVSHRPTLSIAASNGVVGPIAATISDLELA 336 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 + +A D D +N P + ++ +GI K + D D T + W Sbjct: 337 YRIMATPDPQDPVSINFSQPK-KPPVEAHTGKRIIGIYKPWFEDCDQEVKDVT-NTAVKW 394 Query: 292 LK-DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L+ +AG ++V+I +P+ + A+ I E + + Sbjct: 395 LETEAGYEVVDIEIPYLKEGRTAHAITIMTEIGQGFCKGEAS------------------ 436 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD--VILTPT 408 G +++++G +S++ + A+++R ++ + F D VIL+P Sbjct: 437 -----GLTPANKLLVG---VSNKTPARDFNIAQRVRAMLMSHLSSLFATHTDSLVILSPV 488 Query: 409 TPTSAFPLGKEENNS-GSMG------HIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLG 460 TP +G E + + G G + + + N G P+ISVP + +P+G Sbjct: 489 TPHIGVKIGSESHVAKGGSGISDANTSLKSMQYVFLANFTGCPSISVPVGYSLTEGVPIG 548 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFR 488 L + EE L +G+ E+ YF Sbjct: 549 LMGMAAWGGEEVLLGLGECTER---YFE 573 >gi|220920264|ref|YP_002495565.1| amidase [Methylobacterium nodulans ORS 2060] gi|219944870|gb|ACL55262.1| Amidase [Methylobacterium nodulans ORS 2060] Length = 469 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 129/470 (27%), Positives = 196/470 (41%), Gaps = 37/470 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+E+ + + R R + +S E+V + +NA+I + A AAA S+ Sbjct: 1 MTEIRHLDGAALLRRYRERSLSPREVVADVLSRTAAQEPAVNAFILADGEAALAAAAASE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G L+G+P+ IKD A G + S + + +L + GA+ + Sbjct: 61 ARWAAGAPCGPLDGLPVTIKDNIAWAGHPMRRGSRVSPETPLSENAPAVDRLLEAGAIPV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M EF +++ G +PW +T SS G++AA A L A +GTD Sbjct: 121 GKTTMPEFGWKGLGDSTLTGITRNPWDLSRTTGG-----SSAGAAAAAALDLGLAHLGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GSIR PA+F G G+KP+YGR F P + G + R V D+A++++AIA D Sbjct: 176 GAGSIRIPAAFCGVFGLKPSYGRVPAYPPSPFGP-VAHLGPLARRVGDAALMMRAIARPD 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D PDY L+ ++G+ V P+ + P + + + D GA Sbjct: 235 ARDMAAWLSEPPDYSAGLETGLRGLRVAWSPRLGFARQVDPEVAALTAKAAAAFADLGA- 293 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK-DILEMYENTRSIGFGQ 357 IVE EA A G+ + G +L R Sbjct: 294 IVE-------------------EADPGFADPVETLNGIWLVGAWSVLRALPEDRR----P 330 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 EV+ + SR +L A R + F D++LTP+T +AF G Sbjct: 331 EVEPALRAAAE-RGSRIAAPDFLAALNARAAVYTAMAR-FHARYDLLLTPSTAVAAFAAG 388 Query: 418 KEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 GS G + F+ N+ G PA SVP L +P+GLQ++G Sbjct: 389 HLTPPDGSYGEDWLAWTPFSYPFNLTGQPAASVPCGLTRAGLPVGLQIVG 438 >gi|85373051|ref|YP_457113.1| amidase family protein [Erythrobacter litoralis HTCC2594] gi|84786134|gb|ABC62316.1| amidase family protein [Erythrobacter litoralis HTCC2594] Length = 508 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 117/441 (26%), Positives = 195/441 (44%), Gaps = 56/441 (12%) Query: 73 GIPIG-----IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+P+G +KD T+ + T A S +L ++ + ++ G V+LGK N+ E+ Sbjct: 75 GLPLGGMTVLVKDNIETRDMPTTAGSLLLADNATGRDAPLVARIRAAGGVILGKTNLSEW 134 Query: 128 A-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 A + TS + V R+ +TD+ GSS GS AA+A +IGT+T GSI Sbjct: 135 ANFRGDDSTSGWSGVGGLTRNPHATDR-NACGSSSGSGAAIAAGFAWGAIGTETNGSITC 193 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD------- 239 PAS G VG KPT G SR ++ A + D AG +T +A+L+ A+ G D Sbjct: 194 PASINGIVGFKPTVGFVSRTHVVPIAATQDTAGPMTIDTYRAAMLMNAMTGSDPLDPVTA 253 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEY---RLDYLSPTIDKTWQQGISWLKDAG 296 E DA V+ E LD + G+ +G+ +E R D + ++Q ++ ++ AG Sbjct: 254 EADARKVDF----TEGMLDAGLAGVRIGVMREQIGNRAD-----VAALFEQALTDMERAG 304 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL------EMYENT 350 A +V+I + + + E + Y ++ R D L E+ E Sbjct: 305 AVLVDIEFNPDRAMFRDSFAVLLYEFREGIDAY--LQALPRNRASDALLPRSLQELVEGN 362 Query: 351 RSIG------FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL--IKRDFTEAFEQGVD 402 + G FGQ++ + + T + + +R T+ + DF V+ Sbjct: 363 EAAGEAELRWFGQQLFEQALEATDTAAYETARENAVRIAGEETIDRLLADFD------VE 416 Query: 403 VILTPTT-PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 ++ PT P L +N + S+G F +AG P ++VP E +P+GL Sbjct: 417 FLVAPTRGPAWVSDLVVGDNFNSSIG------FGSPAAIAGYPHLTVPMGQVE-GLPVGL 469 Query: 462 QLIGQPFREETLFSVGQIIEK 482 +IG + + + G E+ Sbjct: 470 SIIGAKWEDHAVLKAGSAYER 490 >gi|260433023|ref|ZP_05786994.1| indoleacetamide hydrolase [Silicibacter lacuscaerulensis ITI-1157] gi|260416851|gb|EEX10110.1| indoleacetamide hydrolase [Silicibacter lacuscaerulensis ITI-1157] Length = 479 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 123/479 (25%), Positives = 198/479 (41%), Gaps = 50/479 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E +R RS ++SA E V S I + N +NA E ++ +A A D G Sbjct: 9 LSAAELAERTRSGELSATEAVQSAIDRMHALNPALNAVAEDLSTEALERARSLDTARARG 68 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L G+P+ IK KG T L ++ V L GAV++G+ N Sbjct: 69 EPTGPLHGVPVTIKVNVDQKGHATTNGVAALKDLIAPDDAPVVSNLLKAGAVVIGRTNTP 128 Query: 126 EFAMGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF+ + + YG +PW R + + S G A + G + A + G D GGS+ Sbjct: 129 EFSFRADTDNPLYGRTHNPWGRHISAGGS-----SGGAGVAVMTG-MGALAHGNDIGGSL 182 Query: 185 RQPASFTGTVGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 R PA+ G V +KP GR + G+++ S+ G+ITR+ D + + ++ Sbjct: 183 RFPAAAVGAVTVKPGLGRVPAWNPSQTAERGLLAQLMSVQ--GLITRSAADLHLAMPSLI 240 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D V LP R + Q K + D L P +DK L DAG Sbjct: 241 APDPRDPFHVPLPW----RMAETDHQPRVAFTKKTFGYD-LHPEVDKALDTARDALVDAG 295 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + EI P+ ++ R G R ++L + ++ G Sbjct: 296 YAVDEIDPPNV---------------------FECGRLGYRALMGEVLTLMKDDVEAA-G 333 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-P 415 E RI + +RA R+ R++ F + ++L+P P F P Sbjct: 334 SETIQRIFATYFQEFPPITGPDLIRALAQRSHHAREWA-LFLEDYPLVLSPFLPQPFFRP 392 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREE 471 E + G + + V++ A+N GLPA VPA L E P+ +Q+ + +RE+ Sbjct: 393 DRDTEGSEGVHEVLGSAVYSYAMNFLGLPAACVPARLAELPSGPQPISVQIAARRWRED 451 >gi|13475889|ref|NP_107459.1| allophanate hydrolase [Mesorhizobium loti MAFF303099] gi|14026648|dbj|BAB53245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Mesorhizobium loti MAFF303099] Length = 619 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 111/411 (27%), Positives = 183/411 (44%), Gaps = 50/411 (12%) Query: 68 ARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A+ L GIP +KD G+ T AC+ + P ++TV +L GA+++GK N+D+ Sbjct: 64 AKPLWGIPFAVKDNIDVAGMPTTAACAEYT--YWPDEDATVVARLKAAGALVVGKTNLDQ 121 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 FA G + Y P+ P ++D+ + PGGSS GS+ A A + + ++GTDT GS R Sbjct: 122 FATGLVGVRTPY-PI--PRNAIDA--ELVPGGSSSGSAVATARGIVSFALGTDTAGSGRI 176 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA VG+KPT G S G++ +LD + TV D+ + A D D Sbjct: 177 PAGLNNIVGLKPTVGALSTGGVVPACRTLDCVSVFALTVDDAYAVFSVAAARDAADPYSR 236 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLP 305 ++ V + L ++VGIP + L + + ++ ++ L G ++VEI Sbjct: 237 DIAV----QPLAARPPVLSVGIPAKADLKFFGDVAMQAGFEASLAMLSRLGCRLVEIPFG 292 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIM 364 +Y A++NL Y+G R +D +E E V +I+ Sbjct: 293 D-------FY------ATANL-LYEGAWVAERYAAIRDFMEANEAAM-----HPVTRKII 333 Query: 365 IGTYVLSSR-CYDSHY-LRARKIRTLIKRDFTEAFEQGVDVILTPTTPT---SAFPLGKE 419 G LS+ + Y L+A + + A VD+ PT PT +A L Sbjct: 334 GGARKLSAADAFRGLYALQAYRAKL-------AAVIASVDLFCVPTAPTHYTAAAVLADP 386 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + +G +T VN+ + I+VP + +P+ + L+ R+ Sbjct: 387 VETNSRLG-----TYTNFVNLLDMCGIAVPTGKRDDGLPMSVTLLAPAGRD 432 >gi|109899731|ref|YP_662986.1| amidase [Pseudoalteromonas atlantica T6c] gi|109702012|gb|ABG41932.1| Amidase [Pseudoalteromonas atlantica T6c] Length = 520 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 16/301 (5%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIE---NSNSQMNAYIEVVAQKARAAAEESD 60 L+ + ++E++ LR+ I+ +L D Y+Q IE ++ +NA + + Q A A Sbjct: 37 LHELTLNETQTLLRNNTITVTQLSDYYLQRIEKFDDNGPTLNAIVTLNQQLAEQVAALDM 96 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 K + L G + +KD G+ A S ++ P ++ + +KL A++LG Sbjct: 97 KLKSDAPMGILFGAMVLLKDNIDATGMPNTAGSWLMREHVPSKDAYLVEKLKAQDAIILG 156 Query: 121 KLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 K N+ E+A M SS +S +G ++P S P GSS GS AVA + Sbjct: 157 KTNLSEWANFRSTMSSSGWSSLHGQTLNPHDVTRS-----PCGSSSGSGVAVAADFTLLA 211 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GT+T GS+ PA+ G VGIKPT G SR GII A S D AG + R+V D+ ++L+A+ Sbjct: 212 VGTETDGSVTCPAAVNGIVGIKPTLGLISRSGIIPIAHSQDTAGPMARSVADAVVMLEAM 271 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 G D+ DA+ + PV E ++G +G+ + + Y P +D ++ +S L+ A Sbjct: 272 MGEDKNDASSIA-PVRLVEHLKADGLKGKRIGVVRNM-MGY-HPQLDDVFEAQLSILEKA 328 Query: 296 G 296 G Sbjct: 329 G 329 >gi|288961382|ref|YP_003451721.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] gi|288913690|dbj|BAI75177.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Azospirillum sp. B510] Length = 437 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 115/417 (27%), Positives = 181/417 (43%), Gaps = 49/417 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP--HYESTVTQKLWDNGAVMLGKLNMDEFA 128 L+G + +K F G T A S IL G +P ++ +L GAV++G+ +M EFA Sbjct: 61 LDGRILSVKALFDVAGDTTAAGSAILRG-QPAAMRDARAVARLRAAGAVIVGRTHMTEFA 119 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + +YG +P D + PGGSS G+ +V + ++G+DTGGS+R PA Sbjct: 120 FSAVGINPHYG---NPGNPRDRSR--VPGGSSSGAVISVVDGMAEIALGSDTGGSLRIPA 174 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + +G VG KP+ GR G +P+LD G I TV D+A+L +A DE A L Sbjct: 175 ALSGAVGFKPSSGRLPAEGAFPLSPTLDVIGPIATTVADAALLDSILA--DEPPAPFAPL 232 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 PV G + +P+ D + P + ++ G+ L+ AGA I + S+ Sbjct: 233 PV-----------AGQSFLVPRGRLFDGIEPAVAAAFEAGLDRLRAAGAHIADGSIDAEL 281 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A LA D + +E L G + + RI G Sbjct: 282 DA---------------LAELDRIGVFTAIELAATLADLGVAALDGIDPKTRARIEAG-- 324 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + + Y+R + R + R E + V+L PT P +A + ++ H Sbjct: 325 ---GKAPAADYVRMLRRRAALIRLMDERLTRH-PVLLLPTVPLTAPAIADVLEDAAF--H 378 Query: 429 IYNDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 N T N+ LPAIS+P L +P+GL +G+ + +L + +E Sbjct: 379 RVNLALLRNTRVANLFDLPAISLP--LPSPGLPVGLMAMGRRGGDRSLLGIAAGLES 433 >gi|328875581|gb|EGG23945.1| hypothetical protein DFA_06083 [Dictyostelium fasciculatum] Length = 396 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 124/441 (28%), Positives = 183/441 (41%), Gaps = 79/441 (17%) Query: 60 DKRII---NGDARDLEGIPIGIKDCFATKGIHTQACSHI---LDGFRPHYESTVTQKLWD 113 DK II + D + + G+KD KG ++AC +D + H E + ++L + Sbjct: 12 DKFIIESKQSQSDDQKILEFGVKDTIDVKGYQSKACCRAFESVDVAKEHAE--IVERLLN 69 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD--KFTPGGSSGGSSAAVAGFL 171 G ++GK NM E A G + Y G + D+ PGGSS GS+ AVA + Sbjct: 70 AGCRVVGKTNMHEMAYGLTGINEYTG-------TPDNLKYPGIVPGGSSSGSATAVAHSM 122 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 C ++GTDTGGS+R PA+ TG G+KPT+G SR+G+ SLD G R + + Sbjct: 123 CDFALGTDTGGSVRIPAACTGVFGLKPTHGAVSRIGVHPPHSSLDCVGFFARDIDTIINV 182 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 L+ + D + +P + G+ G L + ID + ++ Sbjct: 183 LERLNPQDLDAKQLLITKLPKF---------GVLTG------LANVQEDIDNLIKSKLTS 227 Query: 292 LKDA------GAKIVEISL---PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD 342 L A G +IV I+L H Q II A N + Y + Sbjct: 228 LVAAKQANGEGGEIVPITLQDNTHDQVFQAGVNII----AFENYSAY-----------AN 272 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---Q 399 IL+ +V R+ G V S+ DS R + FTE + Q Sbjct: 273 ILDRVS--------PDVASRLGHGKNVTSNILADSEKTRTQ---------FTEQIDQLLQ 315 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 +I PT P P EE ++GS + N+ G PAIS+P + P+ Sbjct: 316 STPIIALPTLP--VLPPTVEEVSNGSFQVMQLSRLVRPFNVTGHPAISIPFGEISNR-PV 372 Query: 460 GLQLIGQPFREETLFSVGQII 480 LQLI E L V Q++ Sbjct: 373 ALQLITSKGNELYLCKVVQLL 393 >gi|313903794|ref|ZP_07837183.1| Amidase [Thermaerobacter subterraneus DSM 13965] gi|313465982|gb|EFR61507.1| Amidase [Thermaerobacter subterraneus DSM 13965] Length = 512 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 138/524 (26%), Positives = 218/524 (41%), Gaps = 88/524 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD----- 70 +RS+ + AVE+V++ I+ +E N ++NA + + +A A D+ G A Sbjct: 18 IRSRQVKAVEVVEAAIERVEVLNPRLNAVVVPLFDQALEQARALDEGTPGGAAGASGAGA 77 Query: 71 ---LEGIPIGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 G+P +KD A G+ S GF P +++ ++ G V+LGK N E Sbjct: 78 PGPFTGVPFLVKDLGEALAGVPLTHGSRAYAGFVPDHDAETVRRYKAAGLVILGKTNTPE 137 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + + E YGP +PW TPGGSSGGS+AAVA + + G D GGS+R Sbjct: 138 LGLVAFTEPELYGPCRNPW-----DPSRTPGGSSGGSAAAVAAGMVPLASGGDGGGSLRI 192 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-------GIITRTVRDSAILLKAIAGYD 239 PAS G G+K + GR P Q G++TR+VRDSA +L +A + Sbjct: 193 PASHCGLFGLKASRGRTPT------GPDFGQMWHGAAVYGVLTRSVRDSAAILDLLAPPE 246 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAK 298 + P Y L Q + + + + +D + P K + L++ G Sbjct: 247 PGAPYVIAPPRRSYLDELGQDPEPLRIAVDTRSPIDRPVDPECVKAVEGAARLLEELGHH 306 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDG-----VRYGLRVEGKDILEMYEN-TRS 352 +VE AL A S L Y G VR + G + ++ E TR Sbjct: 307 VVEARPEIDGLAL----------ARSYLTMYCGTVAAEVRRVRELRGPEAVKRLEPATRM 356 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +G E + G + + +D + R L + F Q D+ +TPT Sbjct: 357 LGILGET---VSAGEFSQALEQWD------QAARALGR------FFQQWDLYMTPTVARP 401 Query: 413 AFPLGKEE------------NNSGSM--GHIYNDV---------------FTVAVNMAGL 443 +G+ + N G + G +Y FT N+AG+ Sbjct: 402 PVAVGELKPSPAQERLMNLLNALGILGSGRVYRAAGILEQVALENLAATPFTQLANLAGV 461 Query: 444 PAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 PA+SVP + +P+G+Q + E+ LF + +E+ A +F Sbjct: 462 PAMSVPLHWTPEGLPIGIQFVAPFGAEDRLFRLAGQLERAAPWF 505 >gi|222084481|ref|YP_002543010.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] gi|221721929|gb|ACM25085.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] Length = 463 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 128/500 (25%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVEL---VDSYIQAIENSNSQMNAYIEVVAQKARAAAE 57 M+E +++ + ++ +K +S E ++++I A E + + + AY + AR A Sbjct: 1 MTETTDLSIRQLLEKFSAKSLSPSEYWLALETHIAAWEPTIAALYAYDP---EDARKQAA 57 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S +R G L+GIP+ +K+ ATKG + ++ ++ + ++ ++GA Sbjct: 58 ASTERWAKGTPLGPLDGIPVTLKELIATKGQPVPLGTAAVELVSATEDAPIAARMREDGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V+ K ++ M SS +S++ +PW + PGGSS G+SAA A I Sbjct: 118 VIFAKTTCPDYGMLSSGLSSFHKLSRNPWDPSQN-----PGGSSAGASAAAAAGYGPLHI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKA 234 GTD GGS+R PA +TG G KP++GR I P AG +TRTV D+A + Sbjct: 173 GTDIGGSVRLPAGWTGIFGFKPSHGR------IPVDPYYVGRCAGPMTRTVEDAAYSMAT 226 Query: 235 IAGYDECDATCVNLPVPDYERA-LDQSIQGMTV--------GIPKEYRLDYLSPTIDKTW 285 ++ D D T +LP D++ LD ++G+ + G+P + + K + Sbjct: 227 LSRPDWRDGT--SLPPNDFDWMDLDIDVRGLKIGLMLYAGCGLPVDDDVRDAVVAAAKRF 284 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE 345 ++ AGA I++++ T+ L + AR+ G L E ++++ Sbjct: 285 EE-------AGAIIIDVAPVLTRQMLDGLDVFW-------RARFWGDIVNLSEERREMIL 330 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 Y ++ + G G +V V + R ++ + ++R + FT+ VD +L Sbjct: 331 PYIHSWAKG-GADVSG-------VDAVRGFN----QTIEMRKSCGKLFTQ-----VDAVL 373 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +PT P ++P + + FTV NM+ PA S+ MP+GLQ++G Sbjct: 374 SPTNPIVSYPAEWASPTNDPALPFEHIGFTVPWNMSEQPASSINCGFSRSGMPIGLQIVG 433 Query: 466 QPFREETLFSVGQIIEKEAG 485 F + + + + E +G Sbjct: 434 PRFGDMLVLKLSKAFETWSG 453 >gi|326484199|gb|EGE08209.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Trichophyton equinum CBS 127.97] Length = 621 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 129/484 (26%), Positives = 205/484 (42%), Gaps = 76/484 (15%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP 101 A+ E AAAE S R G R L +GIP +KD + G T C L+ + Sbjct: 165 AWFETRVDLVLAAAEASTLRYKQGCPRGLMDGIPTAVKDEYDIDGYKT--CLGSLNDYTS 222 Query: 102 HYEST-------VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 ES+ +KL + GAV+LGKL+M EF + +S YG ++P+ K+ Sbjct: 223 DPESSGGSIASWCVRKLEEAGAVVLGKLSMHEFGLDTSGSNPNYGTPLNPYNP-----KY 277 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 GGSS G++ AV+ L ++G+D GGSIR P+SF G+KPT+ R S + + + Sbjct: 278 YTGGSSSGTAYAVSVGLLPFALGSDGGGSIRIPSSFCSVYGLKPTHSRISHHPGSNHSNT 337 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMT-VGIPKEYR 273 G + ++ + L + I C P R + G +G+P+ + Sbjct: 338 CAVNGPLAADLQSLSALYRIIG----CPPPTSPF-QPVSPRLAPCNPNGTKYLGVPEAW- 391 Query: 274 LDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 +P I + + IS L D +V I +P+ A+ + +A++ L + Sbjct: 392 FSQATPAIQRLCRSAISTLADKHNYTVVPIQIPYLIEGQIAHAVTILTDAATLLPDTSNL 451 Query: 333 RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 N +G G+E + YL A+K+R L+ + Sbjct: 452 -------------TAPNKILLGLGRETPA---------------TDYLLAQKLRRLLMQH 483 Query: 393 FTEAFEQ--GVDVILTPTTPTSAFPL--GKEENNSGSMGH--IYNDVFTVAVNMAGLPAI 446 + +++ G+ +I+TPTT + +P+ KE S G + F N GLPAI Sbjct: 484 LSWLWKEYPGM-IIVTPTTSCAGWPIRDQKELKYGISDGDQTLKTMNFIWLANFTGLPAI 542 Query: 447 SVPAALC----------------EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR-- 488 +VPA E K+P+GL +G+ E+ L G +E G R Sbjct: 543 NVPAGFVVPEGAKNEGEIAEENTEGKIPIGLMGMGEWGSEDFLMRWGLDVENVVGDRRSK 602 Query: 489 PHKW 492 P W Sbjct: 603 PPVW 606 >gi|315157718|gb|EFU01735.1| amidase [Enterococcus faecalis TX0312] Length = 528 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|257418346|ref|ZP_05595340.1| predicted protein [Enterococcus faecalis T11] gi|257160174|gb|EEU90134.1| predicted protein [Enterococcus faecalis T11] Length = 528 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 216/479 (45%), Gaps = 69/479 (14%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQASQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALILGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSGASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ + L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFATAKKALQKAGAEVI 352 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYD----GVRYGLRVEGKDILEMYENTRSIGFG 356 ++ P I + SN ++ RY L + + L Y Sbjct: 353 PVT--------PDMEGIDGGKVISNEFKFALEEFAKRYDLPFKTLEELIAYNQ------- 397 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 Q+ K R G +L + + I+T IK+ +Q D +L Sbjct: 398 QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKKA-----QQTFDALLK---------- 441 Query: 417 GKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 K++ + G+ + D ++ +AG P ++VP A + P GL +E+TLF Sbjct: 442 -KQQLD----GYAFIDSEGTGLSAVAGYPELTVPLAKNSEGQPYGLTFTQTANKEQTLF 495 >gi|229546573|ref|ZP_04435298.1| amidase [Enterococcus faecalis TX1322] gi|256854397|ref|ZP_05559761.1| amidase [Enterococcus faecalis T8] gi|307296373|ref|ZP_07576198.1| amidase [Enterococcus faecalis TX0411] gi|229308318|gb|EEN74305.1| amidase [Enterococcus faecalis TX1322] gi|256709957|gb|EEU25001.1| amidase [Enterococcus faecalis T8] gi|306496057|gb|EFM65641.1| amidase [Enterococcus faecalis TX0411] gi|315029089|gb|EFT41021.1| amidase [Enterococcus faecalis TX4000] gi|323479932|gb|ADX79371.1| amidase [Enterococcus faecalis 62] Length = 528 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|212533461|ref|XP_002146887.1| N-acylethanolamine amidohydrolase, putative [Penicillium marneffei ATCC 18224] gi|210072251|gb|EEA26340.1| N-acylethanolamine amidohydrolase, putative [Penicillium marneffei ATCC 18224] Length = 611 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 122/489 (24%), Positives = 210/489 (42%), Gaps = 48/489 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAY----IEVVAQKARAAAE 57 S F ++ R S ++ +V++ + I+ + Y +E RAAA Sbjct: 104 SSAGFWTSADYHQRYLSGQLTPTIVVETLLPMIQRDTTPPGKYAIGFLESKIDIVRAAAA 163 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S KR +G L+G+P+ +KD KG S + S +K + GA Sbjct: 164 ASTKRYRDGKPLGPLDGVPVAVKDEVHLKGYKRTLGSKLDFSHGFDVTSWCVEKWEEAGA 223 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +++GK M E + ++N G +P+ + GGSSGGS A+A L ++ Sbjct: 224 IVIGKTTMHEIGIDTTNNNPNTGTPRNPYNR-----NYYCGGSSGGSGYALATGLVPIAL 278 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G D GGSIR PAS+ G G+K T+GR S S APS+ G + ++ D A+ + +A Sbjct: 279 GADGGGSIRIPASYCGVYGLKTTHGRISAAPTPSLAPSVGVYGPMASSIDDLALAYRLMA 338 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-A 295 +A + P+ + + T+GI + +D P++ K + Q I L++ Sbjct: 339 APPSVEADSIASGFPNPLTEIRSAPSTKTIGICPAW-VDRSEPSVRKIFDQTIHHLENQK 397 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G IV+I +P+ A+ + AE ++ + D+ + +T+ + Sbjct: 398 GYNIVDIEIPYLPEGQQAHALTILAELAAG------------IPASDVNSLLPHTKVL-- 443 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 V S+ + Y+ A+K+R+L+ F +++ TPT A P Sbjct: 444 -----------ITVSGSKSTGTDYVAAQKLRSLLMSHLAHLFTTHPGLLI--LTPTVAIP 490 Query: 416 LGKEENNSGSMGHIYNDVFTVA--------VNMAGLPAISVPAALCE-KKMPLGLQLIGQ 466 + + + + H D T N G PAIS PA + +P+G+ +G+ Sbjct: 491 GYEIKGGAKDLSHGVMDALTSTRSMEYVWLANFTGCPAISFPAGYVDGSGIPVGVMAMGE 550 Query: 467 PFREETLFS 475 EE+L S Sbjct: 551 WGSEESLLS 559 >gi|118462799|ref|YP_879955.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium avium 104] gi|118164086|gb|ABK64983.1| 6-aminohexanoate-cyclic-dimer hydrolase [Mycobacterium avium 104] Length = 492 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 134/514 (26%), Positives = 216/514 (42%), Gaps = 86/514 (16%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K ++ EL+ Q + N ++NA +V + A ++ ++G G+P + Sbjct: 15 KQVTPAELLALARQRADAVNPRLNA---IVCRLDDVADRQAADPNLSGP---FAGVPFLL 68 Query: 79 KDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD +G T S L + VTQ+ D G V+ GK N EF E Y Sbjct: 69 KDLGQEYRGFPTSCGSRSLANDVADRHALVTQRFLDAGLVIFGKTNTPEFGAKGVTEPDY 128 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +GP +PW + + TPGGSSGGS AAVA + A+ D GGSIR PA+ G VG+K Sbjct: 129 WGPARNPWDT-----ERTPGGSSGGSGAAVAAGIVPAAGANDGGGSIRIPAACNGLVGLK 183 Query: 198 PTYGRCSRLGIISFAPS-------LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 P+ G+ + P + G++TRTVRDSA LL AI G+ + V LP Sbjct: 184 PSR------GLAPYGPQTGELMLGMATQGVVTRTVRDSAALLDAIIGHHPDASYRVALPD 237 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK----TWQQGISWLKDAGAKIVEISLPH 306 + + + + +T+G L+P D+ + + L G ++ E++ P+ Sbjct: 238 KPFAQQITRPPGPLTIGYSAR---SALNPRPDREAVAAVENSAALLSALGHRVREVAPPY 294 Query: 307 TQYALPAYYII----SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 AL ++ + +++ R G R E D L + E RS G Sbjct: 295 DDAALGRDFLTIWFAQLHQQVADIRRRTGARDN-DFEA-DTLAISELGRSGGV------- 345 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 V+S+ + Y+++ AF +G D LTPT T +G + Sbjct: 346 ----LPVMSALENRNTYIQS-----------LAAFHEGYDFFLTPTLATPPLVVGATSTS 390 Query: 423 SG-----------------SMGHIYNDV---------FTVAVNMAGLPAISVPAALCEKK 456 + + I +D+ +T N+ G PAISVP + Sbjct: 391 AALQRAARLVSRVRGGKLMRLSGILDDLIRESLGWVPYTQLANLTGRPAISVPLHWTDDG 450 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 +PLG+Q +G+ + L + +E+ + + H Sbjct: 451 LPLGVQFVGKLGADGDLLQLAAQLEQARPWAQRH 484 >gi|326315597|ref|YP_004233269.1| amidase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372433|gb|ADX44702.1| Amidase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 457 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 18/243 (7%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ +KD F +G T+A S +L P +++ +L GAV+LG+ NM EFA Sbjct: 75 LAGLPVSVKDLFDVRGQVTRAGSAVLADTGPAAHDAVAVARLRAAGAVLLGRTNMSEFAF 134 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G +P + T GGSS G++A VA L AA++GTDTGGSIR P++ Sbjct: 135 SGLGLNPHHGTPANPRDAGRVT-----GGSSSGAAATVALDLAAAALGTDTGGSIRIPSA 189 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G KPT R G + SLD G + R+V AIL ++G Sbjct: 190 FCGLTGFKPTARRVPLAGAYPLSRSLDSIGPLARSVDCCAILDAVLSGEGS--------- 240 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 D + A + + GM +G+ ++ +D L P + ++ + L AGA+I ++ P + Sbjct: 241 --DADPAGARPLAGMRLGVVQDLVMDGLEPEVAAAFESALRRLSAAGARIERVAFPEL-H 297 Query: 310 ALP 312 ALP Sbjct: 298 ALP 300 >gi|257877474|ref|ZP_05657127.1| amidase [Enterococcus casseliflavus EC20] gi|257811640|gb|EEV40460.1| amidase [Enterococcus casseliflavus EC20] Length = 483 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 134/523 (25%), Positives = 222/523 (42%), Gaps = 95/523 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 ++LR IS E V + + N +NA + Q A E+ ++ + G G Sbjct: 9 EQLRQGQISFAERVAMIEEKVNQQNPLLNALVTFDPQAAIQHYEQHLQKTVFG------G 62 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 P+ +K TK G + + + R + +L + G V LG+ N EF + Sbjct: 63 QPMPLKILGQTKAGWPATSGAKLFAKARASRTAHFVSRLEEAGFVPLGQTNAPEFGFKNI 122 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW S SSGG++AAVA + + +D GGSIR PASF+G Sbjct: 123 TDPTLYGPTRNPWNPAYSAGG-----SSGGAAAAVASGMFPIAGASDGGGSIRIPASFSG 177 Query: 193 TVGIKPTYG---------RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT G R + I+FA +T ++RD+ L A+ Sbjct: 178 LIGLKPTRGTMPVGPSEWRSWQGASINFA--------LTLSMRDTEQLFYAL----RTSQ 225 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGI----SWLKDAG 296 P E Q+ Q + + SPT + +T Q + ++L+ G Sbjct: 226 PTAPYQAPQVEWHHRQASQKPRLKV----AFTTASPTGGQVSETAIQAVRSAAAFLEKQG 281 Query: 297 AKIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVR-YGLRVEGKDIL--EMYENTRS 352 ++VE+ P Q + YY ++ E ++ A + R +R E +++ +Y+ Sbjct: 282 HEVVEVGYPVDGQQMMTTYYAMNGGETAAMFAEINAARQVPVRREEMELMIWALYQ---- 337 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 +G+ ++ YVL+ + +D + E F D+ LTPTT Sbjct: 338 --YGK----KLPAADYVLALQWWDQ-----------LAEKMEEVFST-YDLFLTPTTAYP 379 Query: 413 AFPLGKEENNSGSM---------------GHIYNDVF---------TVAVNMAGLPAISV 448 A PL +E+ S S+ G + ++F T N+ G PAIS+ Sbjct: 380 A-PLIEEDLQSDSIRQRLHEIELLGKSAAGELIEEMFAKSYALTPYTQLANLTGQPAISL 438 Query: 449 PAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P AL E+ +PLG+Q + RE+ LF VG + E + + P + Sbjct: 439 PTALSEEGLPLGIQFMASKGREDLLFQVGYLFEAQQRFLLPKQ 481 >gi|229493243|ref|ZP_04387035.1| Amidase [Rhodococcus erythropolis SK121] gi|229319974|gb|EEN85803.1| Amidase [Rhodococcus erythropolis SK121] Length = 472 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 135/488 (27%), Positives = 206/488 (42%), Gaps = 45/488 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L S S+V ++ + IE + +NA+ V +KA A E+D+R+ G+ L G+P Sbjct: 20 LASGATSSVAATEATLSRIEATQPHLNAFKIVRGEKALEEAAEADRRLARGERLPLLGVP 79 Query: 76 IGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD G T C D +S + ++L D GAV++GK N E Sbjct: 80 IAVKDDVDITGEPTAFGCPG--DFPAKTEDSEMIRRLRDAGAVIVGKTNSPELGQWPLTS 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +G +PW + TPGGSSGG++AAVA L +A IG+D GSIR PA++T V Sbjct: 138 GSAFGYTRNPW-----SRHHTPGGSSGGTAAAVAAGLVSAGIGSDGAGSIRIPAAWTNLV 192 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP-DY 253 GIKP GR S L G + RTV D+A+LL AG + D ++ P P Sbjct: 193 GIKPQRGRISTWPDAEAFYGLTVNGPLARTVADAALLLDVAAGNHDGD---LHKPTPVTV 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 A+ + + + + +D + + + D ++ H PA Sbjct: 250 SDAVGRDPGKLKIALSLRNPFTATPVKLDPEVRLAVHSIADTLRELGH----HVVVDDPA 305 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 Y +I +GL + ++ +++ + V R + + Sbjct: 306 YGLI----------------FGLNFLPRSLVGVHDWLGRVPDPTLVDARTR--GNAQNGK 347 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV 433 LRA + R A DV+L PTT A P G G + V Sbjct: 348 LLRGAPLRAARAAEPRMRKRIGAIFDTYDVVLAPTT---ATPPIMATAIDGIGGWDTDKV 404 Query: 434 FTVAV------NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY- 486 T A N+ G P+++VPA + +P+G QL+G E L S+ +E + Sbjct: 405 MTGACPYAWPWNVLGWPSVNVPAGFSKAGLPIGAQLMGNENTEPLLVSLASQLESVLRWD 464 Query: 487 -FRPHKWW 493 RP WW Sbjct: 465 QVRPEPWW 472 >gi|315031437|gb|EFT43369.1| amidase [Enterococcus faecalis TX0017] Length = 528 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 216/479 (45%), Gaps = 69/479 (14%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQASQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALILGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSGASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ + L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFTAAKKALQKAGAEVI 352 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYD----GVRYGLRVEGKDILEMYENTRSIGFG 356 ++ P I + SN ++ RY L + + L Y Sbjct: 353 PVT--------PDMEGIDGGKVISNEFKFALEEFAKRYDLPFKTLEELIAYNQ------- 397 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 Q+ K R G +L + + I+T IK+ +Q D +L Sbjct: 398 QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKKA-----QQTFDALLK---------- 441 Query: 417 GKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 K++ + G+ + D ++ +AG P ++VP A + P GL +E+TLF Sbjct: 442 -KQQLD----GYAFIDSEGTGLSAVAGYPELTVPLAKNSEGQPYGLTFTQTANKEQTLF 495 >gi|307274675|ref|ZP_07555847.1| amidase [Enterococcus faecalis TX2134] gi|306508604|gb|EFM77702.1| amidase [Enterococcus faecalis TX2134] Length = 528 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|257086095|ref|ZP_05580456.1| glutaminyl-tRNA synthase [Enterococcus faecalis D6] gi|256994125|gb|EEU81427.1| glutaminyl-tRNA synthase [Enterococcus faecalis D6] gi|315025765|gb|EFT37697.1| amidase [Enterococcus faecalis TX2137] Length = 528 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 216/479 (45%), Gaps = 69/479 (14%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQASQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALILGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSGASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ + L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFATAKKALQKAGAEVI 352 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYD----GVRYGLRVEGKDILEMYENTRSIGFG 356 ++ P I + SN ++ RY L + + L Y Sbjct: 353 PVT--------PDMEGIDGGKVISNEFKFALEEFAKRYDLPFKTLEELIAYNQ------- 397 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 Q+ K R G +L + + I+T IK+ +Q D +L Sbjct: 398 QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKKA-----QQTFDALLK---------- 441 Query: 417 GKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 K++ + G+ + D ++ +AG P ++VP A + P GL +E+TLF Sbjct: 442 -KQQLD----GYAFIDSEGTGLSAVAGYPELTVPLAKNSEGQPYGLTFTQTANKEQTLF 495 >gi|29375331|ref|NP_814485.1| amidase [Enterococcus faecalis V583] gi|227554852|ref|ZP_03984899.1| amidase [Enterococcus faecalis HH22] gi|29342791|gb|AAO80555.1| amidase, putative [Enterococcus faecalis V583] gi|227176021|gb|EEI56993.1| amidase [Enterococcus faecalis HH22] gi|315166913|gb|EFU10930.1| amidase [Enterococcus faecalis TX1341] gi|315575364|gb|EFU87555.1| amidase [Enterococcus faecalis TX0309B] gi|315581394|gb|EFU93585.1| amidase [Enterococcus faecalis TX0309A] Length = 528 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 216/479 (45%), Gaps = 69/479 (14%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQASQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALILGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSGASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ + L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFTAAKKALQKAGAEVI 352 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYD----GVRYGLRVEGKDILEMYENTRSIGFG 356 ++ P I + SN ++ RY L + + L Y Sbjct: 353 PVT--------PDMEGIDGGKVISNEFKFALEEFAKRYDLPFKTLEELIAYNQ------- 397 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 Q+ K R G +L + + I+T IK+ +Q D +L Sbjct: 398 QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKKA-----QQTFDALLK---------- 441 Query: 417 GKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 K++ + G+ + D ++ +AG P ++VP A + P GL +E+TLF Sbjct: 442 -KQQLD----GYAFIDSEGTGLSAVAGYPELTVPLAKNSEGQPYGLTFTQTANKEQTLF 495 >gi|124266175|ref|YP_001020179.1| indoleacetamide hydrolase [Methylibium petroleiphilum PM1] gi|124258950|gb|ABM93944.1| indoleacetamide hydrolase [Methylibium petroleiphilum PM1] Length = 470 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 42/480 (8%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 +D+S VE++++++ IE N ++NA + ++A +ARAAA +D+++ G A L G+PI Sbjct: 19 RDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPIT 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +K+ G+ T L G ++ Q++ GA+ + + N+ + A+ ++S Sbjct: 79 VKENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSL 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G ++PW T GGSSGG + A+A + A +G D GGS+R PA+ G I+ Sbjct: 139 HGATLNPWNP-----GRTAGGSSGGDAVALATGMAAIGLGNDIGGSLRNPANACGIASIR 193 Query: 198 PTYGRCSRLGIIS-----FAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 P+ GR G + FA L + G + R V D L+A+ G D ++ P+ Sbjct: 194 PSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGAHPRDPWSISAPL- 252 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 A ++ + P R D P + ++ + L DAG ++ EI P + A+ Sbjct: 253 -VGAAEPGPLRVAVLPEPPGGRTD---PRVAAAVRRAAAALADAGYEVTEICPPRYEDAI 308 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 A+ + + + + L + G+D +E R+I + + Sbjct: 309 TAWAQLLFGDFEAMTPQL------LPMMGRDGAAFWEMLRAI-----------MPPWA-D 350 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + ++R R I RD++ F ++L+PT F G + + Sbjct: 351 TAAVSELFMR----RDGIARDWSR-FMATYPLLLSPTWSQLPFEPGFDCASPAGAADTAE 405 Query: 432 DVFTV-AVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + V N+ GLP+ VPA E +P+G+ L G+ FRE+ + IE+ P Sbjct: 406 MIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATP 465 >gi|56808253|ref|ZP_00366023.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Streptococcus pyogenes M49 591] Length = 484 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 138/505 (27%), Positives = 240/505 (47%), Gaps = 81/505 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G + G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--KPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD KG + + S + ++ ++L G ++LG+ N EF + ++ Sbjct: 68 IFLKDLGQELKGHSSTSGSRLFKEYQATKTDLFVKRLEALGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SSLHGPVNLP---KDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+G + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKDSIYQSLQRSLTIGFYQ--RLSDGSPVSLDTAKALRQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV-KHRI 363 + + YYI++ E ++ A DI E+T FG+ + K + Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFA--------------DI----EDT----FGRPMTKDEM 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKE 419 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 333 ETMTWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGEL 390 Query: 420 ENNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKK 456 +S M ++ +N V +T N+ G PAIS+P ++ Sbjct: 391 VPDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEG 450 Query: 457 MPLGLQLIGQPFREETLFSVGQIIE 481 +P+G+QLI RE+ L + + E Sbjct: 451 LPMGIQLIAAKGREDLLLGIAEQFE 475 >gi|315170697|gb|EFU14714.1| amidase [Enterococcus faecalis TX1342] Length = 528 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 121/440 (27%), Positives = 203/440 (46%), Gaps = 58/440 (13%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 P+ ++ + L+ AGA+++ ++ P + + +IS E L ++ RY Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT-PDME-GIDGGAVIS-NEFKFALEKF-AKRYD 383 Query: 336 LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 384 LPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EVIQTTIKKA--- 432 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCE 454 +Q D +L K++ + G+ + D ++ +AG P ++VP A Sbjct: 433 --QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPLAKNS 475 Query: 455 KKMPLGLQLIGQPFREETLF 474 + P GL +E+TLF Sbjct: 476 EGQPYGLTFTQTANKEQTLF 495 >gi|225557415|gb|EEH05701.1| amidase [Ajellomyces capsulatus G186AR] Length = 574 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 141/568 (24%), Positives = 228/568 (40%), Gaps = 141/568 (24%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ +++ + + L S+ S +L Y++ I N + A IE+ AA +R Sbjct: 31 DIEGLSIPQLQQCLESRKFSVYDLTACYLERIRRINGVLKAVIEINPDALDIAARMDCER 90 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP +KD +TK + T A S +L G ++ V L GAV+LG Sbjct: 91 NQGKHHGPLHGIPFLVKDTMSTKDKMQTTAGSSVLRGTVVPEDAHVVYLLRRAGAVLLGH 150 Query: 122 LNMDEFAMGSSNETSYY--------GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 N+ E+A S ++YY G +P+ + PGGSS GS+ AVA +CA Sbjct: 151 ANLSEWA---SMRSTYYSEGYSSRGGQCRNPYNLAEH-----PGGSSCGSAVAVASNMCA 202 Query: 174 ASIGTDTGGS----------------------IRQPASFTGTVGIKPTYGRCSRLGIISF 211 S+GT+T GS I PA G VGIKPT G + G+I Sbjct: 203 FSLGTETDGSVSILYSHPSKVMIEGIDDHSIQIMMPADRNGIVGIKPTVGLTNGKGVIPE 262 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP-- 269 + SLD G RTV D+AI L I D++ + P + ++++G G+P Sbjct: 263 SRSLDSVGTFGRTVLDAAIALDGIV-----DSSAI--PPCTSIVSGKETLRGAQFGLPWK 315 Query: 270 ---KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS-LPHTQYALP------------- 312 ++ + + + ++Q I +++AGA ++E + P + +P Sbjct: 316 GVWEKANQNEAARKHYQIFEQVIERIREAGANVIEYTDFPSAEEIIPPGGWDWDYPTKQG 375 Query: 313 ----AYYIISPAEASSNLARY---------------DGVRYGLR---------------V 338 + + + E ++L Y D V+Y R Sbjct: 376 HPEQSQFTVVKTEFYNDLKAYLGNLASNPNNISCLDDIVKYNERHAETEGGRPGVHPAWP 435 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 G+D EM +TR + +H ++ Y+R RK R E Sbjct: 436 SGQDSFEMSLDTRGV-MDDTYRHALV--------------YIR-RKSR-----------E 468 Query: 399 QGVDVILTPTTPTSAFPLGKEENN-SGSMGHIYND--VFTVAVNMAGLPAISVPA--ALC 453 +G+D L+ K+ N G + + D V AG P I++P A+ Sbjct: 469 EGIDAALST----------KDRNQLDGLLVPLQADGGVACQVAAKAGYPMITIPVGIAIG 518 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIE 481 E +P G+ +I +RE+ L G IE Sbjct: 519 ENDIPFGIGMIQTAWREDKLIRYGSAIE 546 >gi|260906779|ref|ZP_05915101.1| Amidase [Brevibacterium linens BL2] Length = 482 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 15/275 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL++++ E ++ +K+ISA E + ++ I+ N +NA + + A A A+ +D+ Sbjct: 4 ELDWLSTRELAAKIATKEISAREALSDHLARIDALNPALNAVVTRDDEGALARADAADQA 63 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + NG+ L G+P+ KD T G+ T S I+ P +S + +L G GK Sbjct: 64 VANGEPIGPLHGVPMTHKDTHDTAGMRTTWGSPIMADRVPETDSLIIARLKAAGVNTTGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA GS +G ++P+ T K G S G + AG + A+ G+D G Sbjct: 124 TNVPEFAAGSHTFNPVFGTTVNPY----DTSKSASGSSGGVGAVLAAG-IQASGDGSDMG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PASF VG +P+ GR L FA L Q+G + RTV D A+ + A AG + Sbjct: 179 GSLRSPASFNNVVGFRPSNGRIPHTLPGNPFA-WLAQSGFMARTVSDVALTMSATAGPEP 237 Query: 241 CDATCVNLP-----VPDYE--RALDQSIQGMTVGI 268 ++ P +P++E + ++G+ +G Sbjct: 238 GGPRSISEPGSVFDLPEFELGHQAEPDLRGVKIGF 272 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 ++ G PAISVPA E +P+G+QL+ +P + L + E R H Sbjct: 422 ISATGCPAISVPAGFSESGLPVGVQLVAKPGADVDLLRMAHAFETATQVHRRH 474 >gi|148256142|ref|YP_001240727.1| putative amidase [Bradyrhizobium sp. BTAi1] gi|146408315|gb|ABQ36821.1| putative amidase [Bradyrhizobium sp. BTAi1] Length = 498 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 131/483 (27%), Positives = 216/483 (44%), Gaps = 50/483 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 L++K IS V L+DS ++ I N +NA + + ARA A+ ++ ++ G D L G+ Sbjct: 16 LKTKAISPVALLDSCLERIAAVNPAVNAVVTLDEAGARAEAKAAEAELVRGEDKGPLHGL 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD T G+ + S IL P + +L GA++ GK N E+A G + Sbjct: 76 PVLIKDTQDTAGMRSTYGSPILADNVPVADQASVARLRAAGAIIFGKTNTPEWAAGGNTR 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +P+ + S SSGGS+AA+A + + G+DTGGS+R PA F G V Sbjct: 136 NPVFGATGNPFDPLRSAAG-----SSGGSAAALACGMAPLASGSDTGGSLRNPAGFCGIV 190 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++P+YG + L G + R V D+A++L +A D D LP Sbjct: 191 GMRPSYGLVASDKRAHGWSCLSTDGPMARNVADTALMLSVMASDDTRDPLAYTLP----- 245 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-----ISLPHTQY 309 ++++ G P + + P ID + +++ +D G E + Sbjct: 246 ---GEAVR----GTPARW---AVPPAIDLGRLR-LAFTEDFGFAPTEALIRRAFRARVRR 294 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRV------EGKDILEMYENTRSIGFGQEVKHRI 363 P + S EA+ + + D LR GK+ E E G V+ + Sbjct: 295 IAPLFADAS--EATPDCSGADETFAVLRASLFLTQHGKNYRERPEM-----LGPNVRANV 347 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK----E 419 G LS D + RA +T I R + ++F DV+++PT S P + E Sbjct: 348 EEG---LSYSLED--FSRAAANQTSIYRAY-QSFFAAHDVLISPTITLSPRPWSELYPAE 401 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + + + + AV +AG PA+S+P E +P GLQ++G + + + Sbjct: 402 IDGVPTRSYFHWLALAYAVTLAGHPALSLPLGRDENGLPFGLQIVGPRGGDALVLGIAAA 461 Query: 480 IEK 482 +E+ Sbjct: 462 LEQ 464 >gi|295114041|emb|CBL32678.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Enterococcus sp. 7L76] Length = 528 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALVLGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|294815301|ref|ZP_06773944.1| Amidase [Streptomyces clavuligerus ATCC 27064] gi|326443656|ref|ZP_08218390.1| amidase [Streptomyces clavuligerus ATCC 27064] gi|294327900|gb|EFG09543.1| Amidase [Streptomyces clavuligerus ATCC 27064] Length = 477 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 126/502 (25%), Positives = 204/502 (40%), Gaps = 59/502 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL+ + E +RS +S VEL + Y+ I+ N + AY+ + AR A+E++ Sbjct: 1 MAELHDLTALEQAGAIRSGTVSPVELTEHYLTRIDRLNDTVGAYLTCTPELAREQAKEAE 60 Query: 61 KRIING--DARDL---EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 ++ + R+L G+P+ +KD G+ S + G + V +L G Sbjct: 61 GEALSARREGRELGPLHGVPVPVKDLNQVAGVRCTLGSAVYAGHVSERDDHVVTRLRAAG 120 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 V+LGK N+ EF + + E P +PW ++ G S G +A AG A Sbjct: 121 TVLLGKTNIPEFCLPNHTENRLAPPARTPW----DLERSAGGSSGGAGTAVAAGLAPVAQ 176 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 TD GGSIR PAS G GIKP+ GR S ++ L G + RTV D+A LL + Sbjct: 177 -ATDGGGSIRIPASVCGLFGIKPSRGRVSGGPLLHDVSGLATHGPLARTVGDAAALLDIL 235 Query: 236 AG------YDECDATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLSPTID--KTWQ 286 +G YD LP + A + G + V + E + + D + Sbjct: 236 SGLMPGAPYD-----APALPPGETFSAYARRDPGTLRVAVLVEPPIPGVPVHADCRAACE 290 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 L+ G ++ E+ LP + L ++ + E+ Sbjct: 291 DAAELLRGLGHRVEELELPADEALLDSFVA--------------------------VWEV 324 Query: 347 YENTRSIGFGQEVKHRIMIGTYVL---SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 T + GQE +M T L +R Y+ A + + + DV Sbjct: 325 MAATFPVPPGQE--EELMPLTRHLRERGARVPGLRYVTAMAHFRAVGQFLADQVFSSYDV 382 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPL 459 IL+PT P+G N+ + +T N G P++ VP E+ +P+ Sbjct: 383 ILSPTLAQPPAPVGGLRNDEDPEAEFAAVMAFSPYTSLQNATGQPSVGVPLHHTEEGLPI 442 Query: 460 GLQLIGQPFREETLFSVGQIIE 481 G+ L G+ + L S+ +E Sbjct: 443 GVMLSGRYGDDALLVSLSAQLE 464 >gi|255591588|ref|XP_002535541.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus communis] gi|223522721|gb|EEF26844.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus communis] Length = 228 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 7/233 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M +F E RD + K IS VEL+ + I+ ++N + + + A +A ++ Sbjct: 1 MYSSDFTTALEMRDSIARKQISPVELLKDVYERIDALEPKLNCFTTLTPELAFESARRAE 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + ++ G++ L G+P+ +KD A G+ S ++ ++ +++ GA ++ Sbjct: 61 QAVMRGESLGPLHGLPVSVKDLIAVGGVRQTFGSRVMADNLAAGDAPSVERIKAAGACIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK EF + ++ G +PW TPGGSS G++A+VA + ++GTD Sbjct: 121 GKTTTSEFGCKAVGDSPLTGVTRNPWDLSK-----TPGGSSCGAAASVAAGVTPFALGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 GGSIR PASF G GIKP + R +S P+L G + R+VRD+A+LL Sbjct: 176 GGGSIRAPASFCGVFGIKPQFARVPVF-PVSATPTLGHVGPLARSVRDAALLL 227 >gi|148547974|ref|YP_001268076.1| amidase [Pseudomonas putida F1] gi|148512032|gb|ABQ78892.1| Amidase [Pseudomonas putida F1] Length = 567 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 140/557 (25%), Positives = 221/557 (39%), Gaps = 82/557 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIE-----NSNSQMNAYIEVVAQKARAA 55 M E+ ++++E RD L S +AVELV +Y+ I+ N+ + +NA + V +A Sbjct: 1 MIEVTEVSIAELRDALESGRTTAVELVKAYLARIDAYDGANTATALNAVV-VRNPEALKE 59 Query: 56 AEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 AE SD R G L+GIP KD + KG+ + S ++ ++L Sbjct: 60 AEASDARRAKGQVLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAA 119 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GAV LGK NM A G + YG SP+ + T F G S+G +A A F A Sbjct: 120 GAVCLGKTNMPPMANGGM-QRGVYGRAESPYNANYLTAPFASGSSNGAGTATAASF-SAF 177 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + +T S R PAS G P+ G S G P++D RT+ D +L Sbjct: 178 GLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEILDV 237 Query: 235 IAGYDECD---------------ATCVNLPVPDYERALDQS-IQGMTVGIPKEY------ 272 + D+ D A P E A+D S ++G G+P+ Y Sbjct: 238 VVA-DDADKRGDLWRLQPWVPIPAASTVRPASYLELAVDASALKGKRFGVPRMYINADPE 296 Query: 273 ---------------RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT------QYAL 311 R++ + ID WQQ L+ AGA+++E+ P + Sbjct: 297 AGTAEKPGIGGPTGQRINTRATVID-LWQQARQALEAAGAEVLEVDFPLVSNCEGDRPGA 355 Query: 312 PAYY---IISPAEASSNLARYDGVRYG-----------LRVEGKDILEMYENTRSIGFGQ 357 P Y I+S A L G + R+ D L+++ + + Sbjct: 356 PTVYNRGIVSKAFLHDELWELSGWAFDDFLRANDDPKLNRLADVDGLKIFPHDPGTLPNR 415 Query: 358 EVKHRIMIGTYVLSS----RCYDSHYLRARKIRTL---IKRDFTEAFEQ-GVDVILTPTT 409 E + YV + + +D +R L K D + ++ G+D +L PT Sbjct: 416 EDDLAAGMDEYVNMAKRGLKTWDQIETLPDGLRGLEQTRKLDLEDWMDKLGLDAVLFPTV 475 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA----GLPAISVP-AALCEKKMPLGLQLI 464 P + N + N V+ N+A G+P ++VP + + MP+GL Sbjct: 476 -ADVGPADADINPVSADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFA 534 Query: 465 GQPFREETLFSVGQIIE 481 G+ + + L S E Sbjct: 535 GKAYSDNALLSFAAAFE 551 >gi|78059788|ref|YP_366363.1| amidase [Burkholderia sp. 383] gi|77964338|gb|ABB05719.1| Amidase [Burkholderia sp. 383] Length = 478 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 134/507 (26%), Positives = 218/507 (42%), Gaps = 63/507 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ +E + +D+S+ ELV S +Q +E+ N ++NA ++V+A A AAA +D+ Sbjct: 4 QLWRLSATEMTALVARRDVSSKELVQSCLQRLEDVNPRINAIVDVLADSALAAATAADEA 63 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + + L G+P+ +K G T H +S V L GA+++G+ Sbjct: 64 VARREPTGPLHGVPVTVKVNVDMAGFATTNGVKAFGNLVAHEDSPVVANLRKAGAIIIGR 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N F+ + YG ++PW TPGGSSGG++AAVA + + G D G Sbjct: 124 NNAPAFSYRWFTDNDLYGRTLNPWHP-----GLTPGGSSGGAAAAVAAGIGPIAHGNDLG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-----------AGIITRTVRDSAI 230 GSIR PA G G++PT GR + ++ P+ G + RTV D + Sbjct: 179 GSIRYPAYACGVAGLRPTSGR-----VPAYNPTQSHDRTLAVQLASVQGPLARTVGDLRL 233 Query: 231 LLKAIAGYDECDATCVNLPV-PDYERALDQSIQGMTV------GIPKEYRLDYLSPTIDK 283 L A+A D DA +PV PD A G+P + P + Sbjct: 234 ALSAMAAPDSRDAWW--MPVAPDGGPASTARFPARVAVCPSIPGVPTD-------PVVAD 284 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 +Q WL+DAG + E+ P A + + EA S L GK I Sbjct: 285 AVRQAARWLEDAGCLVEEVVPPRLNEASDLWLALVTNEAVSGL-------------GKTI 331 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 E + G + L++ + Y+ RT + R++ +AF Q + Sbjct: 332 -ETH--------GDQAIRNTFASQRRLATPLDLAGYMNGLAQRTGLLREW-QAFFQQYPL 381 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 +L P + F + +++ I + +A + GLP +SVP + +P G+Q Sbjct: 382 LLMPVSCEQPFAIDEDQRGDDVFRRILDAQGPLLATALLGLPGLSVPTGV-RDGVPTGIQ 440 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFRP 489 ++ F+E + G+ IE AG P Sbjct: 441 IVAGRFQEALCLAAGEAIEARAGICTP 467 >gi|315172178|gb|EFU16195.1| amidase [Enterococcus faecalis TX1346] Length = 528 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFTAAKKALQKAGAEVIPLT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|195330804|ref|XP_002032093.1| GM23702 [Drosophila sechellia] gi|194121036|gb|EDW43079.1| GM23702 [Drosophila sechellia] Length = 536 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 135/520 (25%), Positives = 222/520 (42%), Gaps = 65/520 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++V E R RL+S+ +++VELV +YI+ IE N +NA +E A A E+D Sbjct: 42 SRLLTLSVQELRRRLQSRQLTSVELVRTYIERIEAVNKHLNALVESRFTSALEEATETDD 101 Query: 62 RIING----------DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 I + + R L G+P+ IK+ A +G+ S + + ++L Sbjct: 102 LIASCQTAADVEKLFEERPLLGLPVTIKESCALEGMTFAVGSLSRKNTKAQADGEAVKRL 161 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS-GGSSAAVAGF 170 GA+ L E+ +T G ++P+ S + + G S G+ A++ G Sbjct: 162 KSAGAIPLLVSATPEYCFSIETDTLLNGRCLNPYDSERTPGGSSGGEGSLNGAGASLFG- 220 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-------AGIITR 223 IG+D GGSIR P+ G G KP+ G S G F SLD G ITR Sbjct: 221 -----IGSDIGGSIRIPSLNCGIFGHKPSGGVVSVKG--HFPNSLDPNIGHYLVEGPITR 273 Query: 224 TVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK 283 D + LL+ +AG + + PV L+Q +G E ++ +DK Sbjct: 274 FAEDLSELLQVMAGKENSSKLRLTEPV-----QLNQIKVQYALGF--EGINGWMHSAVDK 326 Query: 284 TWQQGI----SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + I + LK G + + LP+ + ++ A S +A D + Y L E Sbjct: 327 DIRGAICKATTHLKTLGLDVKKARLPNLENSMEM--------ALSGIAGQDLMDYLLTDE 378 Query: 340 -----GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIK--RD 392 GK ++E +S+ + +I + L R ++ KI + R+ Sbjct: 379 TPEGSGKVRETVWEIVKSVRGHSKYTTNALI--FELMRRT--GAFMSQSKINQYMNETRE 434 Query: 393 FTEAFEQGVD---VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 FE + V+L PT A + S+ ++ +T+ N+ GLP VP Sbjct: 435 LIGEFENLLSDDGVLLFPTLNLPA------PRHKWSLLSLWGVDYTLMFNVLGLPVTHVP 488 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 L E+ +P+GL +IG P ++ V +E+ G ++P Sbjct: 489 MGLNERGLPIGLSVIGAPNQDRLCIRVAVELERAFGGWKP 528 >gi|189201323|ref|XP_001936998.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984097|gb|EDU49585.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 547 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 26/304 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L + D ++V+LV +YI I N ++ IE+ A + A+ D+ +G R L G+ Sbjct: 43 LHAGDFTSVDLVKAYIGRIMEVNQTLHMVIEI-NPDALSIAKTLDEERASGKIRGPLHGL 101 Query: 75 PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P+ +K+ AT ++ S L G + ++TV KL + GAV+LGK N+ ++A S+ Sbjct: 102 PVLVKNNIATADKMNNTVGSWSLVGAKVPRDATVVAKLREAGAVILGKSNLSQWANFRSS 161 Query: 134 ETSYYGPVISPWRSM--DSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +S + W + + + PG GSS GS A + L ++GT+T GSI P Sbjct: 162 NSS------NGWSAHGGQTYGAYYPGQDPSGSSSGSGVAASLGLAWGTLGTETDGSIISP 215 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 + VGIKPT G SR ++ + D G + RTV+D+A +L AI+G D D Sbjct: 216 SQVNNIVGIKPTLGLTSRALVVPISERQDTVGAMARTVKDAAYILHAISGPDSYDNYTFA 275 Query: 248 LP------VPDYERA--LDQSIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGA 297 +P P+Y A LD +++G +G+P+ Y D + I ++ + ++ AGA Sbjct: 276 IPWAKLGKKPNYVAACKLD-ALKGKRIGVPRNYIGTPDNTTTAIYAAFEAALDTIRSAGA 334 Query: 298 KIVE 301 +VE Sbjct: 335 TVVE 338 >gi|330820465|ref|YP_004349327.1| amidase [Burkholderia gladioli BSR3] gi|327372460|gb|AEA63815.1| amidase [Burkholderia gladioli BSR3] Length = 455 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 113/391 (28%), Positives = 172/391 (43%), Gaps = 42/391 (10%) Query: 25 ELVDSYIQAIE-NSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIKDCF 82 ELVD + I+ + +A+ +V A AR A+ D R L G+P+ +KD + Sbjct: 25 ELVDIALARIDAEGGNGAHAFCQVDADDARRQADAQDALRRAGVRLSPLAGLPVSVKDLY 84 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNMDEFAMGSSNETSYYGPV 141 G T+A S +LD P L GAV++G+ NM EFA + G Sbjct: 85 DVAGQVTRAGSRVLDDAPPAATDAPAIALMRRAGAVLVGRTNMSEFAFSGLGVNPWRGTP 144 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 SPW+ + SS G++A+VA + AA +G+DTGGS+R PA+F G KPT Sbjct: 145 RSPWQPDEPRVAGG---SSSGAAASVAQGMAAAGLGSDTGGSLRIPAAFCRLTGFKPTAR 201 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 R S G+ + +LD G I +V A++ + +AG + +A + P + Sbjct: 202 RISTRGMFPLSTTLDSTGAIAPSVACCALIDRLLAG-EAIEAGGFSQPA--------APL 252 Query: 262 QGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY--YIISP 319 G+ + + Y + + T+ + W + + L +GAK+V + LP LP+ + SP Sbjct: 253 DGLRLAVLSNYVTEQMDDTVARAWDETLGRLSRSGAKLVPVRLPVLDM-LPSINRFGFSP 311 Query: 320 AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHY 379 EA Y L E TR+ + V R+ IG L++ + Sbjct: 312 IEA-----------YALHRE-------TLATRADAYDPRVLARLRIGEPALAADYIELQA 353 Query: 380 LRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 RA I AFE G D L PT P Sbjct: 354 ARAEAI-----EQARAAFE-GFDAFLMPTVP 378 >gi|295688687|ref|YP_003592380.1| amidase [Caulobacter segnis ATCC 21756] gi|295430590|gb|ADG09762.1| Amidase [Caulobacter segnis ATCC 21756] Length = 497 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 136/499 (27%), Positives = 219/499 (43%), Gaps = 65/499 (13%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKD 80 SA E + + I++ N ++A I A A A+ D G R L G PI +KD Sbjct: 24 SAEEATKAALATIKDKNPTLHAVI-ATNPNALADAKTLDAERKAGKVRSALHGAPILLKD 82 Query: 81 CF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 + + T A S L ++ + ++L + G VMLGK N+ E+A SN++ Sbjct: 83 NIESADPLPTTAGSLALKDNVTGRDAPIAKRLREAGLVMLGKANLSEWANIRSNKS---- 138 Query: 140 PVISPWRSMDST-------DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 IS W ++ T D+ GSS GS AAVA L +IGT+T GSI PA+ G Sbjct: 139 --ISGWSAVGGTVRNPYVLDRSA-CGSSSGSGAAVAAGLAPLAIGTETDGSITCPAAING 195 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-- 250 VG+KPT G SR I+ + S D AG +T TV D+A +L IAG D D + Sbjct: 196 LVGLKPTVGLVSRTHIVPISHSQDTAGPMTTTVEDAAKVLTIIAGSDPADPATKDADARK 255 Query: 251 PDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 DY + L + +++G+ + + + Y SP D +++ + L+ GA +V++ Sbjct: 256 TDYAQGLSRDALKGVKLAVARFYT--GYSPKTDAVFERALKELQAQGAILVDVKDFDEGP 313 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-----FGQEVKHRIM 364 A ++ E +++A Y +V + + ++ ++ FGQE Sbjct: 314 IGKAEGVVLYTELKADMAAYLASTDPKKVPSRTLADLIAFNKATPKEFEWFGQE------ 367 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--------EQGVDVILTPT------TP 410 + +A K + L D+ +A +G+D IL T P Sbjct: 368 -------------SFEKAEKTKGLTDPDYLKALADSKRLAGPEGIDKILKDTGAVAIVAP 414 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+ + N G Y T +AG P ++VP +P+GL IG + E Sbjct: 415 TTGPAWTIDPLN----GDNYGGSSTTLPAVAGYPHLTVPMGDVT-GLPVGLSFIGPAWSE 469 Query: 471 ETLFSVGQIIEKEAGYFRP 489 + L ++G E+ + +P Sbjct: 470 KLLLNLGYAYEQATNHRKP 488 >gi|323341124|ref|ZP_08081372.1| amidase [Lactobacillus ruminis ATCC 25644] gi|323091545|gb|EFZ34169.1| amidase [Lactobacillus ruminis ATCC 25644] Length = 480 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 129/522 (24%), Positives = 222/522 (42%), Gaps = 92/522 (17%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E + +++K +S E V + I+ N Q+NA + + +KA E KR ++ AR Sbjct: 6 TEIANLIKTKQLSPKEAVMNAFSEIKTKNGQLNAVVSLREEKAL----EEAKRCVDL-AR 60 Query: 70 DLEGIPIGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 G+PI +K +G S + + + L G +++G+ N EF Sbjct: 61 PFAGVPILMKSLGQYLEGEPATDGSKLFKDAKATQTDNFVKALQQAGFIIIGQSNAPEFG 120 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + ++ YGP +PW +F GGSSGG+++AVA + + +D GGSIR PA Sbjct: 121 FTNVTDSKLYGPARNPWNP-----EFYSGGSSGGAASAVASKMVPLAAASDGGGSIRIPA 175 Query: 189 SFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 SFTG +G+KPT GR + +SFA ITR++RD+A LL A+ Sbjct: 176 SFTGLIGLKPTRGRTPVGPSSWRGWQGASVSFA--------ITRSIRDTASLLAAV---- 223 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--SPTIDKTWQ-------QGIS 290 V P P L +++ +PK ++ + SP K + ++ Sbjct: 224 ----QTVQPPAPFQTPLLSFNLEN---PLPKNRKVAFSLNSPVQTKVSEAAKQAVLSAVN 276 Query: 291 WLKDAGAKI--VEISLPHTQYALPAYYIISPAEASSNLARYDGV---------------- 332 +L++ G +I E L TQ + YY+++ E++ + + Sbjct: 277 FLEEQGFEIEETEPKLDGTQL-IKDYYLVNDVESAVMFSNIENALERKLKIDDMELISWC 335 Query: 333 --RYGLRVEGKDILEMYENTRSIGFGQEV---KHRIMIGTYVLSSRCYDSHYLRARKIRT 387 + G+ V+ D M N F + K+ + + SH +R Sbjct: 336 ICQAGMDVKATDYSRMLANWDQAAFVMDAFLEKYSFFLTPTTAQTAPEVSHQFINESMRA 395 Query: 388 LIKRDFTEAFEQGVDVILTPTTPT-SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 ++R + + D++ P+ +A P FT N+ G PAI Sbjct: 396 KMRRISELSSRERTDLVYEFFMPSLAATP------------------FTQQANLMGNPAI 437 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 S+P + +PLG+Q + + RE+ L +G++ E+ G FR Sbjct: 438 SLPVHVASNGLPLGVQFVAKKGREDLLLKMGKLFEQN-GKFR 478 >gi|294665450|ref|ZP_06730736.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604785|gb|EFF48150.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 599 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 126/471 (26%), Positives = 203/471 (43%), Gaps = 49/471 (10%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIPIGIKDCF 82 EL+ S I + + + + + ++R A + GD L G+P KD Sbjct: 24 ELLSSLIAGLPPGDVAWISLLSLDGLQSRLAGLAQQLMRVGGDLSKLPLYGVPFAAKDNI 83 Query: 83 ATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G+ T AC ++P + +TV +L GAV++GK N+D+FA G S YGPV Sbjct: 84 DVAGLPTTCACPEF--AYQPTHNATVIDRLEAAGAVVIGKTNLDQFATGLVGTRSPYGPV 141 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 + +++ ++ GGSS GS++ VA L ++GTDT GS R PA VG+KPT G Sbjct: 142 PNAFKA-----EYISGGSSSGSASVVARGLVPFALGTDTAGSGRVPAGHNNLVGLKPTRG 196 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSI 261 S G++ +LD ++ +V D+ L+A+ G+D DA PV R Sbjct: 197 LVSTSGLVPACRTLDCITVLALSVDDADAALRAMGGFDATDAYSRQAPV----RPASWPA 252 Query: 262 QGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPA 320 + + +GIP D+ ++ + + L G ++ I P + Sbjct: 253 KPV-LGIPASP--DWFGDIQAERVYTDALRRLDSIGVELEPIDF------APLF------ 297 Query: 321 EASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYL 380 E ++ L Y+G G R +E N + V+ + T + Y + Y Sbjct: 298 EVAALL--YEGPWVGERYAA---IEELMNAKPDVVHPVVRDIVQKATNFSAVDAYKAEYR 352 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTP---TSAFPLGKEENNSGSMGHIYNDVFTVA 437 R R +A QG+D +L PT P T L + MG V+T Sbjct: 353 RMALARK------ADALMQGLDGLLVPTAPSIYTIEQLLADPVTMNARMG-----VYTNF 401 Query: 438 VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 VN+ AI++PA + +P G+ LI + E L + G+ + A + R Sbjct: 402 VNLLDFSAIALPAGMRADGLPAGITLIAPAWHEARLVAFGRRWQAAAPWKR 452 >gi|257076997|ref|ZP_05571358.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [Ferroplasma acidarmanus fer1] Length = 439 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 131/460 (28%), Positives = 201/460 (43%), Gaps = 63/460 (13%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 D + S +IS L + I + N +N++ + R E + I + L Sbjct: 9 HDLIISGEISPYHLFKKSAENISHLNPDINSFATL-----RPFNEPT---IHKHSSSPLY 60 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 GIP +KD TK + T+ S G P ++ V + L + G V+ GK N EFAMG Sbjct: 61 GIPYSVKDIIDTKNLRTEYGSEFFKGHVPQEDADVIRALDEYGPVLQGKTNTHEFAMG-- 118 Query: 133 NETSYYGPVI-SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 PV +PW + K T GGSSGGS+AAV+ L S+GTDT GSIR P+S Sbjct: 119 ----IVTPVCNNPW----NVSKIT-GGSSGGSAAAVSSGLSLFSLGTDTAGSIRIPSSMC 169 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G G+KPT G S GI A SLD G ITR D ++ A+ G+ A Sbjct: 170 GVSGLKPTTGSLSVKGIFPEAWSLDTVGPITRYASDIPAIVTAM-GFKSPRAKS------ 222 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + L I +T + + S +D + + +K EI + + + Sbjct: 223 QRRKPLLGIIGNLTESSDTNVKFAFYS-FMDHMVSEDLVDIK-------EIHIDNMESMA 274 Query: 312 PAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A +I E A+ + +RY+ VE ++ ++ Y + + + Sbjct: 275 SAADMIDGCENATIHRSRYENNPELFSVESRNQIKYYSSLKPMD---------------- 318 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 Y+ A+++R +F F Q D +++PT PT A P KE N + Sbjct: 319 --------YIEAKRLRMRQGMEFNSLFNQ-YDFLVSPTLPTIA-PDKKEIENVPFDYFMK 368 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 FT N+ G+PA+S+ + MP+GLQ++G R+ Sbjct: 369 YIKFTNPFNLFGVPALSITCGF-SRDMPVGLQIVGGKLRD 407 >gi|255971195|ref|ZP_05421781.1| predicted protein [Enterococcus faecalis T1] gi|255962213|gb|EET94689.1| predicted protein [Enterococcus faecalis T1] Length = 528 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 201/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSAASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPLT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|313675028|ref|YP_004053024.1| amidase [Marivirga tractuosa DSM 4126] gi|312941726|gb|ADR20916.1| Amidase [Marivirga tractuosa DSM 4126] Length = 547 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 228/492 (46%), Gaps = 66/492 (13%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAI----ENSNSQMNAYIEVVAQKARAAAEESDKRI 63 A+S+SR ++ EL Y+ I +S S +N I + A + + Sbjct: 95 AISDSR-------LNYKELTQWYLYRIALFENDSLSTLNNIISINPTAVEEAIARDEGK- 146 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 +GD + G+PI +KD +GI T A + L + ++ + +L ++GA++LGK + Sbjct: 147 -SGDQHPIYGMPILLKDNINFEGIPTTAGAVALQNNQTG-DAHIVSRLENSGAIILGKSS 204 Query: 124 MDEFAM----GSSNETSYYG-PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 + E+A G N S G ++P+ +F GGSS GS +++A A +IGT Sbjct: 205 LSEWANFLCDGCPNGYSAIGGQTLNPY----GRGEFDTGGSSSGSGSSMAANYAAGAIGT 260 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI P+S VG+KPT G SR GI+ + +LD G +T+ V D+AI+L A+ G Sbjct: 261 ETSGSILSPSSSNSIVGLKPTVGLLSRGGIVPISSTLDTPGPMTKNVMDNAIILSALTGE 320 Query: 239 DECDATCV-NLPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D D V N P DY ++L +S ++GM +G+ K + D L ++ + L++ G Sbjct: 321 DSEDEVTVGNSPEKDYWKSLKESNLEGMRLGVMKGFLEDSL-------YKVNVKQLEELG 373 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI-----LEMYENTR 351 A++VE+ P L + + + ++L Y G VE + + + ++ Sbjct: 374 AELVEVEAPEVD--LSGFLTLLNLDMKADLPHYFENYAGPSVELRSVQDVIQFNLEDSAT 431 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 I +GQ I+ + S+ +DS L+ R + + T E +D +L+ Sbjct: 432 RIPYGQARFDGIVNDS--TSAMEFDS--LKTRLMSEGRRYFETMMNENELDAVLSI---- 483 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 N+ S G+ +A PA++VP + P G+ I P+ EE Sbjct: 484 ----------NNWSAGY---------AAVAHHPALTVPMGYEKDGQPKGITFIAAPYSEE 524 Query: 472 TLFSVGQIIEKE 483 L + EK+ Sbjct: 525 KLLKIAYAFEKK 536 >gi|289669967|ref|ZP_06491042.1| amidase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 486 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 124/473 (26%), Positives = 199/473 (42%), Gaps = 57/473 (12%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGIP 75 RS+ A L + I +N ++ A ++ +A A A + G D L G+P Sbjct: 53 RSQPTLAARLATQTLTRINQANDRLCAITRLLPARAAADAARVQAALAGGSDGGALAGVP 112 Query: 76 IGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F G T A + P ++ V Q+L D GAV++G NMDEFA G + Sbjct: 113 FVVKDLFDVAGQVTTAGAAGRAQCAPAARDAAVVQRLGDAGAVLVGTANMDEFAYGFATV 172 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++YG +P + GGSSGGS+AAVA L ++G+DT GSIR PA+ G Sbjct: 173 NAHYGTTTNP-----HDHQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGVY 227 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G++PT+G G+ F +LD G +V D L+ + YE Sbjct: 228 GLRPTHGAVPVDGVFPFVDALDVVGPFATSVSD----LRRV-----------------YE 266 Query: 255 RALDQSIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 ++ T G + RL + +D G+ L A I LP + A A Sbjct: 267 VMCGHALPSRTTGNLRIARLGGWFQRNLDPDLDAGLEALLTACNSTTTIELPEAERARAA 326 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++++ AE R+ R L G F + R++ G + +S Sbjct: 327 AFVLTAAEGGH---RH---RSALHTHGAQ------------FDPATRDRLLAGLQLPASA 368 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM---GHIY 430 D+ + A VDV++ P TP A + ++ + Sbjct: 369 VADAQRFAHWFANAM------HALWDDVDVLIAPATPCVAPRIDQDTIQIDGLPVSARAN 422 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +FT + +A P ++ P ++PLG+QLI P RE+ +F++ +E++ Sbjct: 423 LGIFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRVFALAAQLERD 474 >gi|170699142|ref|ZP_02890196.1| Amidase [Burkholderia ambifaria IOP40-10] gi|170135937|gb|EDT04211.1| Amidase [Burkholderia ambifaria IOP40-10] Length = 471 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 119/474 (25%), Positives = 208/474 (43%), Gaps = 44/474 (9%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIG 77 + +S VE++ + + + Q+N + + A AAA ES++R + D L+G+P+ Sbjct: 19 RALSPVEVMSAVLDQGRELDRQVNCLCCIDEEGALAAARESEQRWMRNDPCGLLDGVPVS 78 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 +KD A +G+ T+ S ++ +L GA++ GK E+ ++ Sbjct: 79 VKDLVAVRGVPTRYGSRTSSARVEQKDAPAVGRLRHAGALLFGKTTTSEYGNKIVTDSPL 138 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW +T + G S G + A G + S+ TD GGSIR PA ++G VG K Sbjct: 139 TGITRNPW----NTHVSSGGSSGGSAVAVALG-IGPLSLATDGGGSIRVPACWSGVVGFK 193 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 P++G G + SL G I RTV D+A++L +A ++ D+ L Sbjct: 194 PSFGMVP-TGTEASWTSLSTLGPIARTVSDAALMLTVMARVQHTHDPLMSSSR-DWRVGL 251 Query: 258 DQSIQGMTV---GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 D + G+ V P R++ P I +QG++ ++ GA + E + Sbjct: 252 DDGVAGLRVAYCAAPAGVRVE---PAIADCVKQGVAVIEALGAHVEEAA----------- 297 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I+P + +R +++ + + + ++ E ++ +V+ G + Sbjct: 298 --IAPLDGYLK-SRMHSIQWSVFF-AQRVRQLDEQAQA-QLDPDVRALAESGARETTFSL 352 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL-GKEENNSGSMGHIYNDV 433 D+ L+AR + T +F E F D+++TPT P+ G E G+ Sbjct: 353 VDA--LQARHVLTAAMTEFFEQF----DLLVTPTFHCGPPPVPGLPEELRGA------PP 400 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T N G PA+S+P L MP+GLQ+IG + + + E G F Sbjct: 401 LTSWCNQTGFPAVSIPCGL-PGGMPMGLQIIGPHGADARVLRAARAYESARGPF 453 >gi|167647582|ref|YP_001685245.1| amidase [Caulobacter sp. K31] gi|167350012|gb|ABZ72747.1| Amidase [Caulobacter sp. K31] Length = 473 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 135/510 (26%), Positives = 223/510 (43%), Gaps = 63/510 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L AV + RS+ I+AV ++ ++ + +++NA ARA A+ D Sbjct: 1 MDFLQLDAVDQIEALARSQ-ITAVRALELAVERADALQARVNAVTSRRIGAARAEAQAID 59 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + G L G+P+ +KD +G+ A L + H ++ V +++ GAV+ Sbjct: 60 EARQRGQKLGRLAGLPMTVKDTLDIEGLPASAGRMDLTNRQVH-DAEVVRRVRSEGAVVW 118 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G N A YG +PW + T GGSSGGS+AA+A + A IG D Sbjct: 119 GHTNTPVNAGDWQTHNKLYGVTRNPW-----NEALTCGGSSGGSAAALAAGISALEIGAD 173 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP-SLDQA--GIITRTVRDSAILLKAIA 236 GS+R PAS G + +KPT+G S+ G++ A LD A G + R+ RD A+L + Sbjct: 174 IAGSLRIPASLCGVMALKPTFGLISQAGLVPPAEGELDMAVVGPMARSARDLALLFSILT 233 Query: 237 GYDECDATC-VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E AT V++P ++G+ G+ + I ++ ++ L+D Sbjct: 234 ---EAPATTGVSVP-----------LRGLRAGLWLDESGFATDLEIRRSAERFAETLRDE 279 Query: 296 GAKIVEISLP---------HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 GA++ P +T P + +P S LA Y +R ++ Sbjct: 280 GARVEACRGPIGGEAILETYTSLIYPLLWANAP---RSELAVYRALRLPAKL-------- 328 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 R +G G + VL++ + RA+ R + D FEQ DV++ Sbjct: 329 ---ARRLGAGP-----LSWAKGVLAATSSAAEQRRAQVERLRLAADVQTFFEQ-FDVLIA 379 Query: 407 PTTPTSAFP-------LGKEENNSG-SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 PT PT AFP L + + G ++ + ++ LPA++ P L +P Sbjct: 380 PTAPTPAFPHDHRSIHLRRLKLTDGRKTSYLQMMAWPALASVWKLPALAFPIGLSRDGLP 439 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +G+QL+G+P + L + Q +E G F+ Sbjct: 440 IGVQLMGRPGSDTFLLDLAQTLEARLGGFQ 469 >gi|329573534|gb|EGG55139.1| Amidase [Enterococcus faecalis TX1467] Length = 515 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 199/444 (44%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 95 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 153 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 154 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 209 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 210 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 269 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 270 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 316 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 317 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 366 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 367 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 418 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 419 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 458 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL E+TLF Sbjct: 459 AKNSEGQPYGLTFTQTANNEQTLF 482 >gi|29833239|ref|NP_827873.1| allophanate hydrolase [Streptomyces avermitilis MA-4680] gi|29610361|dbj|BAC74408.1| putative amidase family protein [Streptomyces avermitilis MA-4680] Length = 550 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 116/439 (26%), Positives = 178/439 (40%), Gaps = 55/439 (12%) Query: 54 AAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLW 112 A A +D+R+ G L G +K G+ T A C + P ++ +L Sbjct: 34 AEAAVTDERVAAGQRLPLAGRLFAVKGNIDVHGLATTAGCPAY--AYLPEADAPAVARLR 91 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GA++LG N+D+FA G S YG V R + + GGSS GS+ AVA + Sbjct: 92 AAGAIVLGTTNLDQFATGLVGTRSPYGAV----RGAYDPARIS-GGSSAGSAVAVALGIV 146 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GTDT GS R PA+F G VG+KPT G G + SLD + RT+ ++ L Sbjct: 147 DFALGTDTAGSGRVPAAFNGIVGLKPTRGLVPTTGTVPACASLDCVTVFARTLPEAEQAL 206 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 +A D + P R V +P +L L + ++ + L Sbjct: 207 AHLASPPGRDLPPLPQRAPGPWR----------VAVPPLPQLGELDEGWGEAYEAAVEHL 256 Query: 293 KDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 AG + I L P T+ A Y E + RY V ++ + Sbjct: 257 VAAGVSVRTIDLSPFTEAAAMLY------EGAFVAERYTAV--------GSFVDKLISEG 302 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP- 410 G V I + + R + ++ TL R E + D +L PTTP Sbjct: 303 GAGLDPTVAGIITRARDIPAHRLFADQ----ERLATLRTRALAELGD--ADALLLPTTPG 356 Query: 411 ------TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 +A PLG +G FT + N+ L A++ PA L ++P G+ LI Sbjct: 357 HPTLAEVAADPLGANAR----LGR-----FTNSTNLFDLAAVAAPAGLTPAQLPFGVMLI 407 Query: 465 GQPFREETLFSVGQIIEKE 483 G F + L + +++ + Sbjct: 408 GPAFTDGRLARIAALLQPQ 426 >gi|312221645|emb|CBY01585.1| hypothetical protein [Leptosphaeria maculans] Length = 607 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 147/301 (48%), Gaps = 26/301 (8%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKD 80 S+ +LV +Y I N + +E+ A + A D+ G R L GIPI IKD Sbjct: 111 SSGDLVKAYFARISQVNDALRPVLEM-NPDALSDASILDQERSQGKIRGALHGIPILIKD 169 Query: 81 CFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA----MGSSNET 135 T ++ A S+ L G R ++TV KL + GA++LGK + E+A + SSN Sbjct: 170 LIGTGDKMNNTAGSYALLGARVPRDATVVSKLREAGAIILGKTAVSEWANLRSLNSSNGW 229 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF----LCAASIGTDTGGSIRQPASFT 191 S RS T + G GSS+ A L ++GT+T GS+ PAS+ Sbjct: 230 SA--------RSGQVTTAYVAQGDPSGSSSGSAVAAALGLSLGALGTETDGSLVLPASYN 281 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP-- 249 V IKPT G SR I +P D G +TRTV+D+A +L+AIAG D D +P Sbjct: 282 NIVAIKPTVGLTSRYMAIPISPRSDTIGPMTRTVKDAAYILQAIAGLDPNDNYTSAIPHK 341 Query: 250 -VPDYERALD-QSIQGMTVGIPKE-YRLDYLSPTIDKT--WQQGISWLKDAGAKIVEISL 304 + DY A + S+ G +G+P+ L + T+ T ++ + L+ GA IVE S Sbjct: 342 EIQDYIAACNASSLFGSRIGVPRHVLTLLATNTTVPMTNAFENALDHLRAHGATIVETSF 401 Query: 305 P 305 P Sbjct: 402 P 402 >gi|299532327|ref|ZP_07045720.1| amidase [Comamonas testosteroni S44] gi|298719735|gb|EFI60699.1| amidase [Comamonas testosteroni S44] Length = 462 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 134/497 (26%), Positives = 212/497 (42%), Gaps = 83/497 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R SA L+ I A + S N + + +AR AA E+ L G+ Sbjct: 12 IREGRQSAANLMQMSIAAAQ-SPLCANVFSQTFFDEARWAAAETPSTT------PLAGLA 64 Query: 76 IGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD F T+G + A S +L D ++T +L GA ++G+ +M EFA Sbjct: 65 ISVKDLFDTQGARSAASSLVLQDAPLARTDATAVARLRAAGAAIIGRTHMVEFAFSGVGV 124 Query: 135 TSYYG------------PVISP-WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 ++G P ++P W + PGGSS G++ +VA A++G+DTG Sbjct: 125 NPHFGTPAALDARHPANPQLAPTWPAR------IPGGSSSGAAVSVASGAAWAALGSDTG 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+ G VG K T G + +P+LD A ITR+VRD+ +L + +AG Sbjct: 179 GSIRIPAALNGLVGFKSTARLVPTEGTVPLSPTLDTACAITRSVRDAVLLHEILAGRK-- 236 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 V ER+L Q + +P+ D + P + +++ I+ L+ GA+I Sbjct: 237 --------VARDERSLSQ----WRLAVPRPLFFDQIEPAVRNAFERSIAKLQAGGAQIEW 284 Query: 302 ISLPHTQYALPAYYI--ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 I LP + I SP E+ Y R L+ K L + V Sbjct: 285 IDLPELEELDGVNTIGGFSPTES------YAWHRRHLQDPAKAAL----------YDPRV 328 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK- 418 + RI G + ++ D R R I + E+ G D +L+PTTP +A + Sbjct: 329 RSRIERGASMSAADYLDLLAARKRWIAKM------ESAIAGYDALLSPTTPITAPTIASV 382 Query: 419 -EENNSGSMGHIYND--VFTV---------AVNMAGLPAISVPAALCE--KKMPLGLQLI 464 N + + D F V VNM A+S+P C ++P+GL + Sbjct: 383 APANGFDAAADLRRDEEFFRVNGLLLRNTSVVNMLDGCALSLP---CHNPNELPMGLMIW 439 Query: 465 GQPFREETLFSVGQIIE 481 ++ + ++ IE Sbjct: 440 HAALHDDAILNISAGIE 456 >gi|209559252|ref|YP_002285724.1| amidase [Streptococcus pyogenes NZ131] gi|209540453|gb|ACI61029.1| Putative amidase [Streptococcus pyogenes NZ131] Length = 484 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 138/505 (27%), Positives = 240/505 (47%), Gaps = 81/505 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G + G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--KPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD KG + + S + ++ ++L G ++LG+ N EF + ++ Sbjct: 68 IFLKDLGQELKGHSSTSGSRLFKEYQATKTDLFVKRLEALGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SSLHGPVNLP---KDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+G + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKDSIYQSLQRSLTIGFYQ--RLSDGSPVSLDTAKALRQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV-KHRI 363 + + YYI++ E ++ A DI E+T FG+ + K + Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFA--------------DI----EDT----FGRPMTKDDM 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKE 419 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 333 ETMTWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGEL 390 Query: 420 ENNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKK 456 +S M ++ +N V +T N+ G PAIS+P ++ Sbjct: 391 VPDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEG 450 Query: 457 MPLGLQLIGQPFREETLFSVGQIIE 481 +P+G+QLI RE+ L + + E Sbjct: 451 LPMGIQLIAAKGREDLLLGIAEQFE 475 >gi|116495734|ref|YP_807468.1| amidase [Lactobacillus casei ATCC 334] gi|116105884|gb|ABJ71026.1| Amidase family enzyme [Lactobacillus casei ATCC 334] Length = 487 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 121/514 (23%), Positives = 212/514 (41%), Gaps = 98/514 (19%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+ +S EL+DS + + N +NA R A + D + + G+P Sbjct: 12 IRAGVLSPAELIDSTREKMTALNPALNAITWT-----RFEAAKQDANQLEDHGQPFFGVP 66 Query: 76 I---GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + G+ FA G S + + + + L G +++G+ N+ EF + Sbjct: 67 LILKGLGQDFA--GAPATFGSRFFAKAKSEHTNNFVKALQRLGFIIVGQSNVPEFGFKNI 124 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + YGP +PW ++PGGSSGG++A VA + + G+D GGSIR PASF+G Sbjct: 125 TDAELYGPARNPWNR-----DYSPGGSSGGAAAVVASGISPLATGSDGGGSIRIPASFSG 179 Query: 193 TVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT GR + I+FA +T+T+ D+A LL+ +A Sbjct: 180 LIGLKPTRGRVPTGPGEWRGWQGASINFA--------LTKTMADTAALLRGLA------- 224 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKD 294 L P L + VG + ++ Y +S T K + L+ Sbjct: 225 -TTQLAAPFIAPPLRLDL----VGDARPLKIAYTTTSPVGTPVSDTAVKAVETAADALRA 279 Query: 295 AGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 AG ++V + AL AYY+++ E ++ + + + G + D+ + Sbjct: 280 AGHQVVAAAPDVDGTALMKAYYMMNGGE-TAAMFQAFAAQTGKQATAADMELITWVIYQA 338 Query: 354 GF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G + + +G + ++ Y SH F + D++L+PTT + Sbjct: 339 GLHTSAADYSLSLGAWDRAAEAY-SH------------------FHESYDLLLSPTTAKT 379 Query: 413 AFPLGKEENNSGSMGHIYN--------------DVF---------TVAVNMAGLPAISVP 449 A + + + + + D+F T N+ G PAIS+P Sbjct: 380 APRIDAVLQSPAIVAKMQHAAELAPQEQQELIWDLFEPSLEYSPFTQQANLTGAPAISLP 439 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A+ + +PLG+Q RE+ L +G E++ Sbjct: 440 TAISPEGLPLGIQFTAAKGREDQLLRIGYWFEQQ 473 >gi|71906969|ref|YP_284556.1| indole acetimide hydrolase [Dechloromonas aromatica RCB] gi|71846590|gb|AAZ46086.1| Amidase [Dechloromonas aromatica RCB] Length = 510 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 139/509 (27%), Positives = 223/509 (43%), Gaps = 65/509 (12%) Query: 3 ELNF--MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 E++F + +SE+ S +S LV +I+ + +N+ +N +I + A A A D Sbjct: 30 EIDFSTLTISEAMRHFASGALSCETLVTHFIERAK-TNADLNVFITLDVDGALAEARAVD 88 Query: 61 -KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G + L GIPI IKD G+ A + L F P ++ Q+L D GA++L Sbjct: 89 ANRAKGGATKPLSGIPIVIKDNIHAAGLPATAGTPALANFVPDADAPTVQRLRDAGAIIL 148 Query: 120 GKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 GK NM E A G++ N + + D++ GSS GS+AA+ + +++G Sbjct: 149 GKTNMHELAFGATGYNYAFHQEGTVGVRNPYDASRIAG--GSSSGSAAALGARMAISALG 206 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGS+R P + G ++P++GR S G+I + S D G + + D A+L + G Sbjct: 207 TDTGGSMRIPCALNGCASLRPSWGRYSGEGVIPISCSRDTVGPMGLCMADVALLDAIVTG 266 Query: 238 YD-----ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 D + D + + VP + LD Q ++ K+ L Sbjct: 267 DDALPPVQLDKLRLGV-VPGFWANLDADTQAISAAALKK--------------------L 305 Query: 293 KDAGAKIVEI---SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK--DILEMY 347 +DAG +EI L A+ +I A YD + LR +G I +++ Sbjct: 306 EDAGVCFIEIPDAGLQELNQAIGFPVVIYEA--------YDDMVAYLREQGPGISIEQLF 357 Query: 348 ENTRSIG----FGQEVKHRIMIGTYVLSSRCYDSHYLRARKI---RTLIKRDFTEAFEQ- 399 E S + V R IG D+ + A + R +K + E FE+ Sbjct: 358 EQIASPDVKGIYKDMVLPRRTIGE---GGALVDAVPVYAEAVEHGRPALKARYRELFERY 414 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALCEKK- 456 +D + PTTP A P+ + E H I N T A LP+I +P L Sbjct: 415 ELDAFVFPTTPIVA-PVARPEVCLPENFHWLIQN---TEPAASANLPSIQLPIGLGPSTG 470 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +P+GL+L G ++ + ++G +E G Sbjct: 471 LPVGLELDGPFGQDRQMLAIGIELESLLG 499 >gi|83644408|ref|YP_432843.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A-like protein [Hahella chejuensis KCTC 2396] gi|83632451|gb|ABC28418.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Hahella chejuensis KCTC 2396] Length = 436 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 125/471 (26%), Positives = 196/471 (41%), Gaps = 80/471 (16%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 E+ ++ I I + A+ QK A+ D R G L G+PIG+KD F T Sbjct: 25 EMCEALITQINRYEPDIRAFAAFDPQKLLQQAQAIDSRPSKGK---LSGLPIGVKDIFDT 81 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 T+ S I RP + +V +L GA+++GK EFA + GP +P Sbjct: 82 VDFATEYFSPIYRNHRPSRDCSVVARLRQEGAIVMGKTETTEFAF------MHTGPTRNP 135 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 +MD T PG SS GS+A +A ++G+ T GS+ +PAS+ G KPT G S Sbjct: 136 -HAMDHT----PGSSSAGSAAGLAAGFFPVALGSQTAGSLLKPASYCGLFAFKPTRGIVS 190 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 G+ APS D G R++ D +L + + L+ I Sbjct: 191 LEGVKPLAPSFDTVGWYGRSMNDLRLLAEVL---------------------LEPYISLQ 229 Query: 265 TVGIPKEYRL----DYLSPTIDKTWQQ----GISWLKDAGAKIVEISLPHTQYALP-AYY 315 T + + RL D PT++ + ++ + L+ G I S P L ++ Sbjct: 230 TSPVTRPLRLACVIDEFWPTVETSVKESFLTSLLTLRSQGHHIENTSTPFGLRQLAESHK 289 Query: 316 IISPAEASSNLA-RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 I++ E S LA Y R L LEM EN + F +E+ + I ++ Sbjct: 290 IVNDREGSRALAYEYASRRSQL---SASTLEMIENGLRLTFVEELAAKTTINA---AANA 343 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 Y F D I+T +TP SA P G + + ++N + Sbjct: 344 YPQ-------------------FMADYDAIITLSTPHSA-PEGLLTTGTSDLIKVWNAL- 382 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 G+P +++P L ++P+GLQ++G + L VG++I G Sbjct: 383 -------GVPQLNIPLTL-PGRLPVGLQIVGIQGGDGWLLEVGRVIAGALG 425 >gi|114569662|ref|YP_756342.1| amidase [Maricaulis maris MCS10] gi|114340124|gb|ABI65404.1| Amidase [Maricaulis maris MCS10] Length = 583 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/309 (30%), Positives = 154/309 (49%), Gaps = 17/309 (5%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +++ F V + +R +++ L D Y+ I + ++ V ARA A+ +D+ Sbjct: 128 ADIAFAPVWKLGQWMRRGVLTSRRLTDIYLDRIAVHGDTLECFVTVTPDLARAQADAADR 187 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G R L GIP G+KD G+ + ++TVT +L + GAV+LG Sbjct: 188 ELAAGQDRGPLHGIPYGMKDIVDVAGVRATWGATPYQDRVAEADATVTTRLREAGAVLLG 247 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K A G + + G +PW + + + SS GS++A A L A IGT+T Sbjct: 248 KTTNGALAYG---DRWFGGITRNPWNTQEGSSG-----SSAGSASATAAGLVAFGIGTET 299 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI P++ GT G++PT+GR SR G ++ SLD+ G I R+V D+ ++L A+ G+D Sbjct: 300 LGSIVSPSNRCGTTGLRPTFGRVSRHGAMALCWSLDKIGPICRSVEDTGLVLAALNGFDA 359 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 DA +++ + E + ++GM VG Y + D + + +DAG ++V Sbjct: 360 ADAGSLDVGL---EIDAARPVRGMRVG----YSPAWFEAGSDAD-RAALQAARDAGVELV 411 Query: 301 EISLPHTQY 309 E+ LP Y Sbjct: 412 EVELPDLPY 420 >gi|170692931|ref|ZP_02884092.1| Amidase [Burkholderia graminis C4D1M] gi|170141929|gb|EDT10096.1| Amidase [Burkholderia graminis C4D1M] Length = 508 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 138/498 (27%), Positives = 223/498 (44%), Gaps = 77/498 (15%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E R + +K+IS VEL+++ I IE N +NA ARAAA+ ++K++++G+ Sbjct: 14 ELRRMIGAKEISPVELLEACIARIEAVNPAVNAITATDFVAARAAAKRAEKQVLDGEPLG 73 Query: 71 LEGIPIG-IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L +KD T G+ T S + G P + + ++L GA++ K N+ E Sbjct: 74 LLHGLPLGVKDLENTAGLLTTYGSPMSRGNVPTQDVVLVERLRAAGAIVTAKTNVPELGA 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G++ +G +P+ + GGSSGGS+AA+A + G+DTGGS+R PAS Sbjct: 134 GANTRNPVWGATGNPFNT-----ALNAGGSSGGSAAALACDMLPVCTGSDTGGSLRIPAS 188 Query: 190 FTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 G VG +PT G + ++ ++P + G + R+V ++ + L A G D Sbjct: 189 KCGVVGFRPTPGLVPNSRKLVGWSP-ISVVGPMGRSVAEACLQLAATVGISAGDP----- 242 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT- 307 L + ++ P + L L + W +D G+ V+ S+ + Sbjct: 243 --------LSFAADPLSFAAPADIDLSTLR----------VGWTEDFGSCDVDASIRNVF 284 Query: 308 --QYALPAYYIISPAEASSNLAR----YDGVRYGLRVEG------KDILEMYENTRSIGF 355 + AL A S E S +L +D +R V G +D ++ NTR+ Sbjct: 285 RERIALIAPSFRSCEEVSFDLGDVHRCFDVIRAESFVAGLHDAYTRDPAQLGPNTRA--- 341 Query: 356 GQEVKHRIMIGTYVL--SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 Y L S DS + +A + R I + F AFEQ DVIL+PTTP S Sbjct: 342 -----------NYELGASMSLADSAWAQAEQTR--IFKRFQAAFEQ-YDVILSPTTPVSP 387 Query: 414 FPL---------GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 FP G+E++N + T V + PA+S+P + MP GLQ++ Sbjct: 388 FPWQQLYAAQIDGREQDN-----YYRWLALTYVVTLTTHPALSLPCGVDHAGMPFGLQVV 442 Query: 465 GQPFREETLFSVGQIIEK 482 G + +V +E+ Sbjct: 443 GPFHGDRKTLAVAHAMEQ 460 >gi|27378985|ref|NP_770514.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27352135|dbj|BAC49139.1| bll3874 [Bradyrhizobium japonicum USDA 110] Length = 498 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 145/527 (27%), Positives = 226/527 (42%), Gaps = 86/527 (16%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L++ ++S L ++ ISA EL+ I IE + ++NA I +A+ AA +D Sbjct: 11 DLDYGSISVLLGALHARKISASELLAHTIARIEALDGKINAVIVRDFDRAKDAARAADAA 70 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ + L GIP+ +K+ F G+ T H D F+P ++ V +L GA+++GK Sbjct: 71 LGRGERQPLLGIPVTLKEPFNVAGLPTTWGFPHFRD-FKPEEDALVVSRLKAAGAIIIGK 129 Query: 122 LNMDEFAMGSSNETSY---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 N+ +G + SY +G +PW S SSGG AA+A SIG+ Sbjct: 130 TNI---PIGLRDFQSYNDIHGTTNNPWDLGRSPGG-----SSGGCGAALAAGFGPLSIGS 181 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS--------LDQAGIITRTVRDSAI 230 D GGSIR P+ F G G KP+ G G S P+ L G + RT D A+ Sbjct: 182 DIGGSIRVPSHFCGVFGHKPSLGLVPLRG-YSLPPAPPVPGQGDLAVVGPMARTASDLAL 240 Query: 231 LLKAIAGYDECDATC---VNLPVPDYERALDQSIQGMTVGIPKEYRL-----DYLSPTID 282 L IAG DE + LP P +++ K +R+ L PT D Sbjct: 241 ALDVIAGPDETRDGIGYRLALPAPRHDQL-------------KNFRILVIDTHPLMPTGD 287 Query: 283 KTWQQGISWLKD------AGAKIVEISLPHTQYALPAYYII-----SPAEASSNLARYDG 331 + I L AG SLP + Y + SP + LA G Sbjct: 288 AV-RSAIGRLAKRLERSGAGVARASTSLPDLAESARLYMKLLNAARSPRLTPAALAEAQG 346 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 + L + + + + R+ G+G + HR + T D+ L+ ++ L R Sbjct: 347 LAAALSPDDRSL----QAERARGWG--MIHREWLAT--------DAARLQLQQRWQLFFR 392 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM----GHIYN-----DVFTVAVNMAG 442 +F D ++ PT AFP + E G +YN ++ + G Sbjct: 393 EF--------DAVIYPTAAVPAFPHDQSEPFDARQLDIDGKLYNYSDACFIWADPASTCG 444 Query: 443 LPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 LPA +VP +P+G+Q+IG + T ++ +IE+E G F P Sbjct: 445 LPATAVPIERTATGLPIGVQIIGPYLEDRTTIALAGLIEREFGGFVP 491 >gi|300309358|ref|YP_003773450.1| amidase family protein [Herbaspirillum seropedicae SmR1] gi|300072143|gb|ADJ61542.1| amidase family protein [Herbaspirillum seropedicae SmR1] Length = 482 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 123/481 (25%), Positives = 206/481 (42%), Gaps = 48/481 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKR 62 L+ +A+S + +RSK++S E++ +Y++ IE N +NA + + ++ A+ +D+ Sbjct: 7 LDALALSAA---IRSKEVSCREVMQAYLEHIEKMNPHVNAIVSLRPPEELLDEAKRADQL 63 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G + G+P KD + KG+ T S + ++T ++ D GA+ +GK Sbjct: 64 LAQGRYLGWMHGMPQAPKDLASCKGLPTSKGSPLSSMAPDQSDATCVARVRDAGAIFIGK 123 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EF +GS++ Y P+ R+ + G S G +A L A G+D Sbjct: 124 TNVSEFGLGSNS----YNPLFGVTRNAYDFSRIAGGSSGGAGAALAMRMLPVAD-GSDMM 178 Query: 182 GSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+R PA+F G +PT GR G F L G + RTV D A L AGYD Sbjct: 179 GSLRNPAAFNNVYGFRPTQGRVPYGSGGELFLQQLSTEGPMGRTVADVARLFATQAGYDP 238 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW---QQGISWLKDAGA 297 + V L + +G +G Y D P ++ + +S D G Sbjct: 239 QCPLSSDTDVTGDAAQLKRDFKGARIGWLGNY--DGYLPIEEEVMVLCEAALSDFADIGC 296 Query: 298 KIVEISLPHTQYALPAYYIISPAE-ASSNLARY--DGVRYGLRVEGKDILEMYENTRSIG 354 + + + L +++ NL+ Y D R GL Sbjct: 297 TVEQCRPDYPMEKLWETWLVHRQWLVGGNLSVYFADPARRGL------------------ 338 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 E + + G Y+ ++ + RA R+ R + FEQ D +L P+ F Sbjct: 339 LKPEAQWEVESGQYLTAADVF-----RASMARSDWYRAIHKLFEQ-FDYLLLPSAQMFPF 392 Query: 415 PLGKE--ENNSGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 + + N +G Y+ V + +AGLPA+SVP +P+G+Q+IG P R+ Sbjct: 393 DVATKWPRNVAGREMDTYHRWMEVVIGPTLAGLPAMSVPVGFGANGLPMGMQIIG-PSRD 451 Query: 471 E 471 + Sbjct: 452 D 452 >gi|120612456|ref|YP_972134.1| amidase [Acidovorax citrulli AAC00-1] gi|120590920|gb|ABM34360.1| Amidase [Acidovorax citrulli AAC00-1] Length = 471 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 110/473 (23%), Positives = 201/473 (42%), Gaps = 35/473 (7%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 R+ +S VE + + + + + +NA+ + A +A ES++R + G+ L+G+P Sbjct: 19 RTLALSPVEAMRAVLDRVHEVDGDVNAFCALDEDGAMRSAAESEQRWLRGEPLGPLDGVP 78 Query: 76 IGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD AT+G+ T+ S L + ++ Q+L GA++ GK EF + Sbjct: 79 VSVKDMVATRGMATRFGSRTLPEDHLVEVDAPCIQELRRAGALIFGKTTTSEFGNKIVGD 138 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G +PW ++D T + GG+ +A + ++G+D GGSIR P+++ G Sbjct: 139 CPLTGITRNPW-NLDRTAGGSSGGAGAALAARMGPL----AVGSDGGGSIRVPSAWNGVC 193 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KP++ R + + + G + R VRD A LL A+A D + P D+ Sbjct: 194 GLKPSFKRVPSMDTQNVG-EVANIGPMARDVRDLATLLGAMARPWPRDWQ-ASAPAEDFL 251 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 L+ ++G+ + + + ++P + ++ L+ GA++ + + A Sbjct: 252 AGLEAGVEGLRIAFSTDLGIVGVAPETARAAERAAGLLETLGARVTRLG----RLAPLDD 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 Y+ S AR + + G +D F E+ + + G +L+S Sbjct: 308 YMRSGMHTVLWTARLEHLVRGTPAHLQD-----------RFDPEILNLVTAGRGMLASEL 356 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 D+ R + + AF + DV+L PT F Sbjct: 357 MDAMIARLKLASAM------HAFFEDYDVLLCPT-----FHCPPPAVPGLPPELRTAPPL 405 Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 T N PA S+P L +P+GLQ+IG + + V + E+ G F Sbjct: 406 TSWCNHTQQPAASIPCGLSSDGLPIGLQVIGPRMHDALVLRVCRAYERARGEF 458 >gi|315151562|gb|EFT95578.1| amidase [Enterococcus faecalis TX0012] Length = 528 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 28/303 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQTSQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALILGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS+A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSAASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ + L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFATAKKALQKAGAEVI 352 Query: 301 EIS 303 ++ Sbjct: 353 PVT 355 >gi|222082034|ref|YP_002541399.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] gi|221726713|gb|ACM29802.1| glutamyl-tRNA amidotransferase subunit A protein [Agrobacterium radiobacter K84] Length = 476 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 14/237 (5%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-ARDLEG 73 ++ + +SA ++D+ A++ ++A+ + ++A A D+RI G+ L G Sbjct: 17 KVSAGAVSARAVLDAAFAALDKVEPIIHAFATLAREEAYDTAAALDERIARGEPVGPLAG 76 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ IKD TKG+ T S++ F P + V ++L A++LGK N+ EF G+ Sbjct: 77 VPVAIKDLVLTKGLRTTFGSNLYADFIPDADDIVVERLKAADAIILGKTNVSEFGFGAHG 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 + +PW+ S PGGSS GS+AAVA +C +IG+D GGS+R PA+ +G Sbjct: 137 NNLLFPATGNPWKPERS-----PGGSSAGSAAAVAAGVCPIAIGSDGGGSVRLPAALSGL 191 Query: 194 VGIKPTYGR------CSRLGI--ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 VG+K GR C + +S S++ G I R V D+A++L IAG D D Sbjct: 192 VGVKAAMGRVPLWPGCRDISFPGVSGWESIEHIGPIARDVADAALMLSVIAGPDPRD 248 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 402 DVILTPTTPTSAFPLGKEENNS--GSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMP 458 D ILTPT +AF K+ ++ G Y FT N+ G PA SVP L +P Sbjct: 382 DFILTPTLSVTAFAKDKDGPSTIDGKPIAPYEWCPFTSPFNLTGQPAASVPCGLV-NGLP 440 Query: 459 LGLQLIGQPFREETLFSVGQIIE 481 +GLQ++G + + S E Sbjct: 441 IGLQIVGPHLGDAKVLSAAAAFE 463 >gi|32455886|ref|NP_862539.1| allophanate hydrolase [Pseudomonas sp. ADP] gi|13937522|gb|AAK50333.1|U66917_102 allophanate hydrolase [Pseudomonas sp. ADP] Length = 605 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 121/440 (27%), Positives = 198/440 (45%), Gaps = 54/440 (12%) Query: 50 QKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGF--RPHYEST 106 + A A ++ +R G+A L GIP G+KD G+ T A C+ GF P + Sbjct: 62 ESALAMLADAQQRKDKGEALPLFGIPFGVKDNIDVAGLPTTAGCT----GFARTPRQHAF 117 Query: 107 VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAA 166 V Q+L D GA+ +GK N+D+FA G + + +G + + + GGSS GS+ A Sbjct: 118 VVQRLVDAGAIPIGKTNLDQFATGLNGTRTPFGIPRCVF-----NENYVSGGSSSGSAVA 172 Query: 167 VAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 VA S+GTDT GS R PA+F VG+KPT G S G++ A SLD ++ TV Sbjct: 173 VANGTVPFSLGTDTAGSGRIPAAFNNLVGLKPTKGLFSGSGLVPAARSLDCISVLAHTVD 232 Query: 227 DSAILLKAIAGYDECD-----ATCVNLPVPDYERALDQSIQGMTVGIP-KEYRLDYLSPT 280 D+ + + AGYD D A L + R + G+P E+R + Sbjct: 233 DALAVARVAAGYDADDAFSRKAGAAALTEKSWPRRFN-------FGVPAAEHRQFFGDAE 285 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 + + + + L++ G IS +T + A + + + LA + L E Sbjct: 286 AEALFNKAVRKLEEMGGTC--ISFDYTPFRQAAELLYAGPWVAERLAAIE----SLADEH 339 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 ++L V+ I+ + + ++ Y A +R E+ + Sbjct: 340 PEVLHPV-----------VRDIILSAKRMSAVDTFNGIYRLADLVRA------AESTWEK 382 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMP 458 +DV+L PT PT + E+ + +++ +T VN+ L AI+VPA +P Sbjct: 383 IDVMLLPTAPT----IYTVEDMLADPVRLNSNLGFYTNFVNLMDLSAIAVPAGFRTNGLP 438 Query: 459 LGLQLIGQPFREETLFSVGQ 478 G+ IG+ F + + S+G+ Sbjct: 439 FGVTFIGRAFEDGAIASLGK 458 >gi|227517702|ref|ZP_03947751.1| amidase [Enterococcus faecalis TX0104] gi|227074857|gb|EEI12820.1| amidase [Enterococcus faecalis TX0104] Length = 528 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 25/268 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQTSQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSAASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+ ++ + L+ AGA+++ ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT 355 >gi|238586315|ref|XP_002391135.1| hypothetical protein MPER_09479 [Moniliophthora perniciosa FA553] gi|215455411|gb|EEB92065.1| hypothetical protein MPER_09479 [Moniliophthora perniciosa FA553] Length = 323 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 126/231 (54%), Gaps = 18/231 (7%) Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 A++G++T A S L G ++ V ++L GA++LGK N+ EFA + G + Sbjct: 9 IASEGMNTTAGSFSLLGSVVPEDAGVVKRLRKAGAIILGKANLSEFAH-------FRGNL 61 Query: 142 ISPW--RSMDSTDKFTPGG----SSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S W R +T+ + P SS GS AV+ L ++G++T GSI P+S VG Sbjct: 62 ASGWSGRGGQNTNAYFPNADPCGSSSGSGVAVSIGLATVTLGSETDGSITCPSSNNNAVG 121 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP--VPDY 253 IKPT G SR G++ + + D G ITR+V D+AI+L IAG D D + P VPD+ Sbjct: 122 IKPTVGLTSRAGVVPISANQDTIGPITRSVSDAAIVLSVIAGKDPNDNFTLAQPDAVPDF 181 Query: 254 ERALD-QSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 + L+ +++G +G+P+ + + P++ +++ + ++ GA IV+ Sbjct: 182 TKNLNVNALKGKRIGVPRAVFFTPGFNDPSVVAAFEETLKTIESLGATIVD 232 >gi|225427944|ref|XP_002277377.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 508 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 27/308 (8%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGDARD 70 S+++L S+ +LVD Y+ IE N ++ IEV AR ++++ I N + + Sbjct: 39 SQNKLVSR-----QLVDFYLHQIEALNPELCNVIEV-NPDAREQTDKANAEIKSNKELGE 92 Query: 71 LEGI-PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+ + +KD TK ++T S+ L G + ++ V ++L GAV+LGK +M E+ Sbjct: 93 LHGVLTVLLKDSINTKDKLNTTVGSYALLGAKVGGDAAVVERLRKAGAVILGKASMSEWY 152 Query: 129 MGSSNETSYYGPVISPW--RSMDSTDKFTPGG----SSGGSSAAVAGFLCAASIGTDTGG 182 S +T + W RS + + P G S+ GS+ +VA + A S+GT+T G Sbjct: 153 QFRSLKTR------NGWCPRSGQGVNPYVPSGDPCESNSGSAISVAANMVAVSLGTETDG 206 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI PA VG KPT G SR+G+I +P D G I +V D+ +L AI G+D D Sbjct: 207 SIICPADVNSVVGFKPTIGLTSRVGVIPISPRQDSVGPICWSVLDAVYVLDAIVGFDPRD 266 Query: 243 ATCVN-----LPVPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 +PV Y++ L++ I G +G+ + + + + + Q+G + + Sbjct: 267 GEATKEASKFIPVGGYKQFLNKDGIAGKRLGVVRNPFSGFYNRSTECCRQRGAILVDNLE 326 Query: 297 AKIVEISL 304 + V+I L Sbjct: 327 IENVDIIL 334 >gi|118347758|ref|XP_001007355.1| Amidase family protein [Tetrahymena thermophila] gi|89289122|gb|EAR87110.1| Amidase family protein [Tetrahymena thermophila SB210] Length = 427 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 31/330 (9%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAI-ENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +VS+ ++ L+ ++++ +LV+ + E + E ++A A+ D++ + Sbjct: 88 SVSQLKEMLKKNEVTSEDLVNIFSHRCREIGLKEYYCITEFDYERAIEFAKVLDQKRLED 147 Query: 67 ----DARDLEGIPIGIKDCFATKGIHT-QACSHILDGFRPHYESTVTQKLWD-NGAVMLG 120 D++ L G+P+ IKD F KGI T C++ L+ R + +T KL +G + Sbjct: 148 PNIVDSQPLYGVPVSIKDFFDVKGISTSMGCANRLE--RIQQDDGLTVKLIKISGGIPFV 205 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ + M YG ++PW D T PGGSSGG + VA +GTD Sbjct: 206 KTNVPQLGMSFETINRIYGRTLNPW---DKTR--YPGGSSGGEAVCVATRCSPLGVGTDF 260 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTV------RDSAILLKA 234 GGSIR PASF G G KPT GR +AP+ II ++ D ILL Sbjct: 261 GGSIRSPASFNGLYGFKPTSGRIPLQVQSMYAPTQRGETIIKTSIGPICKNMDDCILLME 320 Query: 235 IAGYDECDATCVN------LPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTI--DKTW 285 + E +N L VP D E ++ Q + +G K LD ++ + Sbjct: 321 ALNHKELLNIKLNEGLLHQLYVPFDKEILYGKNQQKLKIGFLKT--LDEFDASLANQRAV 378 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYY 315 Q + L++ G ++VEI +P+ + + +Y Sbjct: 379 QMTVDGLREQGHELVEIQIPNIERLIYIFY 408 >gi|242778166|ref|XP_002479184.1| N-acylethanolamine amidohydrolase, putative [Talaromyces stipitatus ATCC 10500] gi|218722803|gb|EED22221.1| N-acylethanolamine amidohydrolase, putative [Talaromyces stipitatus ATCC 10500] Length = 609 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 126/494 (25%), Positives = 216/494 (43%), Gaps = 60/494 (12%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESDK 61 F ++ R S D++ +V++ + I+ ++E + RAAA S K Sbjct: 108 FWTSADYHQRYLSGDLTPTIVVETLLPMIQRDAKPPGRFSIGFLEAKIELVRAAAAASTK 167 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQ--ACSHILDGFRPHYESTVTQKLWDNGAVM 118 R G L+G+P+ +KD KG + S GF S +K + GA++ Sbjct: 168 RYREGKPLGPLDGVPVAVKDEVHMKGYKRTLGSKSDFSHGF--DVTSWCVEKWEEAGAIV 225 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK M E + ++N G +P+ + GGSSGGS A+A L ++G Sbjct: 226 IGKTTMHEIGIDTTNNNPNTGTPRNPYNR-----NYYCGGSSGGSGYALATGLVPIALGA 280 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGSIR P+S+ G G+KPT+GR S + S APS+ G ++ + D A+ + +A Sbjct: 281 DGGGSIRIPSSYCGVYGLKPTHGRISAVPTPSLAPSVGVYGPMSSNIDDLALAYRLMAAP 340 Query: 239 D--ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DA 295 E D+ P E + + + T+G+ + + +D P + + Q I LK Sbjct: 341 PPIEADSIASGFSNPLAEIQFNTNTR--TIGVFQAW-IDRSEPAVRNIFDQIIKHLKTQK 397 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G I++I +P+ A+ + AE ++ + D+ + +T+ + Sbjct: 398 GYNIIDIEIPYLPEGQQAHALTILAELAAG------------IPASDVTSLLPHTKVL-- 443 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--EQGVDVILTPTTPTSA 413 V S+ + Y+ A+K+R+L+ + F G+ +ILTPT P + Sbjct: 444 -----------ITVSGSKSTGTDYIAAQKLRSLLMSHLSYLFTTHPGL-LILTPTAPIAG 491 Query: 414 FPLGKEENNSGSMGHIYNDVFTVA--------VNMAGLPAISVPAALCEKK-MPLGLQLI 464 + E + + H D FT N G PAISVP + +P+G+ + Sbjct: 492 CEIKGGEKD---LSHGVMDTFTSTRSMEYVWLANFTGCPAISVPGGYDDSTGIPVGVMAM 548 Query: 465 GQPFREETLFSVGQ 478 G+ EE+L + Sbjct: 549 GEWGSEESLLEFAR 562 >gi|307107223|gb|EFN55466.1| hypothetical protein CHLNCDRAFT_57824 [Chlorella variabilis] Length = 527 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 6/174 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP +KD G T A + + + + L+D G + LGK N+D+FA G Sbjct: 69 LWGIPFAVKDNIDVAGCPTTAACPAFE-YAAAEHARAVKPLFDAGGIFLGKTNLDQFACG 127 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG P + D D+F+PGGSS GS+ AVA LC ++GTDT GS R PA Sbjct: 128 LVGTRSPYG---VPANAFD--DRFSPGGSSCGSAVAVAAGLCTFALGTDTAGSGRVPAGN 182 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 G VGIKP+ GR S G++ LD + +V D A + + + D D T Sbjct: 183 NGIVGIKPSVGRFSTTGVVPACQLLDCPSVFALSVEDGAEVARLMENGDIADPT 236 >gi|329917228|ref|ZP_08276452.1| Amidase [Oxalobacteraceae bacterium IMCC9480] gi|327544595|gb|EGF30075.1| Amidase [Oxalobacteraceae bacterium IMCC9480] Length = 441 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 133/470 (28%), Positives = 200/470 (42%), Gaps = 69/470 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAY----IEVVAQKARAAA 56 M+ + + SE R+ ++I+A +V + + I ++++ A+ + Q+ARA Sbjct: 16 MNNILTLPASELVRRISQREITAEAVVRACTERILADDTRIRAWQFFDPALALQQARALD 75 Query: 57 EESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S A L G+PIG+KD T + + S I G RP ++ V GA Sbjct: 76 AGSP-------AGALHGLPIGVKDLMDTADMPSTYGSVIYAGHRPATDAAVVAMSRAEGA 128 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +++GK EFA T G +P +D TPGGSS GS+AAVA + + Sbjct: 129 IVMGKTVTTEFA------TFQPGATCNPRAPVDQ--PHTPGGSSSGSAAAVAAGMVPLAF 180 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 G+ T GSI +PA++ G VG KPT+G GI +PSLD G++ R+V D+A + +A Sbjct: 181 GSQTAGSIIRPAAYCGIVGYKPTHGTLPLAGIKPLSPSLDTVGVLARSVDDAAFFVGVLA 240 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 + L V + R + VGI D + L+ AG Sbjct: 241 R--------LPLQVVAHGR--------LRVGICHTPHWDRAGDDSRAALARTARLLEQAG 284 Query: 297 AKIVEISLPHTQYALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 A + ++ LP L A I I EAS+ A E+ N G Sbjct: 285 AVLTDLVLPEACNGLTAAQIDIMGYEASAAFAP----------------ELLNNPD--GL 326 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 K + G V +R + + L A I R +A VD++L P+T A P Sbjct: 327 SDAFKRLLASGLAVDGTRFFAAQELAA------IARQSVDALFNHVDIVLAPSTEGEA-P 379 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 G I+N ++T + G P + VP MPLG+ LIG Sbjct: 380 AGIAATGD----PIFNRLWT----LLGNPCVHVPTGTGSTGMPLGVTLIG 421 >gi|148230949|ref|NP_001091200.1| fatty acid amide hydrolase, gene 1 [Xenopus laevis] gi|120538313|gb|AAI29733.1| LOC100036968 protein [Xenopus laevis] Length = 583 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/310 (29%), Positives = 145/310 (46%), Gaps = 16/310 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +S+ D+L+ ++A ++ +YI+ N ++N + +++ A +E K+ G Sbjct: 78 LTLSQLVDQLKKGSLAAESVLVAYIEKALEVNKELNCLTDFLSE-CEAQLQEVKKQKEKG 136 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+PI +KD KG H C + G +S + Q L +GAV K N+ Sbjct: 137 L---LYGVPITLKDNVGYKG-HDSHCGLVQFLGIADQEDSVIVQVLKKHGAVPFVKTNIP 192 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 + + S +G ++P K T GGSSGG +A +AG +GTD GSIR Sbjct: 193 QSMINFDCSNSIFGQTLNP-----HNHKKTCGGSSGGEAALIAGGGAVLGVGTDVLGSIR 247 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA----GIITRTVRDSAILLKAIAGYDEC 241 P SF G G+KP+ R S LG + + A G + R V A+ +KA+ D Sbjct: 248 MPCSFCGICGLKPSGNRLSSLGFSTPVSGMKSAVMMPGPMARDVDSLALFMKAVLCDDMF 307 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 PVP + + S + +T+G SP + + Q+ + L++AG K+V Sbjct: 308 QLDPTVPPVP-FRDEIYNSSKPLTIGFYDTDGYFLPSPGMRRAIQETKALLEEAGHKLVP 366 Query: 302 ISLPHTQYAL 311 S P +YAL Sbjct: 367 FSPPRIEYAL 376 >gi|330899037|gb|EGH30456.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 597 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%) Query: 32 QAIENSNSQMNAYIEV-----VAQKARAAAE----ESDKRIINGDARDLEGIPIGIKDCF 82 Q N + NA++ + + ++AR A + D+R G A L GIP GIKD F Sbjct: 76 QETYGDNGKYNAFVRLEDFSALLEQARLADQWLTTPDDQR---GPAPPLCGIPFGIKDSF 132 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 A +G+ ++ + G ++T +L GA+++G E + + + + G Sbjct: 133 AIQGLESKNGTQAFSGNLALRDATCVARLRAQGALIIGHTICSELSTHTVGQ--FAGNAW 190 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P R TPGGSS GS A LCAA++G +T GSI PA+ G IKP+ G Sbjct: 191 DPIR--------TPGGSSQGSGVAPIARLCAAALGEETAGSIIIPAAANGASAIKPSLGL 242 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPDYERALDQS- 260 S G++ D G + R++RD++++L IAG D E D ++ P + ++ + Sbjct: 243 VSGAGVMPLRSGWDVVGPMARSIRDASLILSIIAGPDGENDPQSLSAPSIGEQLSITPTP 302 Query: 261 ----IQGMTVGIPK 270 +QG+T+GIP+ Sbjct: 303 GSLPLQGLTIGIPQ 316 >gi|299140370|ref|ZP_07033531.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298597645|gb|EFI53822.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 542 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 117/251 (46%), Gaps = 13/251 (5%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++V + R + E+V ++ I N A V A+ A A D Sbjct: 4 DLTDVSVDRLHELYREHRYTVTEVVQWHLDRIARYNGVYRAVQTVTAKAALTEAGREDVE 63 Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQA--CSHILDGFR--PHYESTVTQKLWDNGA 116 R L G+PI IK + G+ T A ++L G ++ + KL GA Sbjct: 64 AKQAGFRPGPLWGVPIVIKANTSIAGLTTTAGWIGYMLPGHELVAPRDAPIVAKLRKAGA 123 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAAS 175 +++G NM +FA + ++ +G R+ ++ D +F+PGGSSGG+ AV L Sbjct: 124 ILVGVTNMPDFAASDTTRSTAFG------RTGNAYDVRFSPGGSSGGTVTAVTSNLAVLG 177 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 GTDTG SIR P + + VGI PT G S GI LD G I RTV D+A+ L + Sbjct: 178 NGTDTGNSIRMPVATSNLVGIFPTRGLVSIAGIAPLDWQLDNTGPIARTVADAAVALTVL 237 Query: 236 AGYDECDATCV 246 AG D D + Sbjct: 238 AGEDPLDPATI 248 >gi|257415305|ref|ZP_05592299.1| glutaminyl-tRNA synthase [Enterococcus faecalis AR01/DG] gi|257157133|gb|EEU87093.1| glutaminyl-tRNA synthase [Enterococcus faecalis ARO1/DG] Length = 541 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 201/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 127 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 185 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 186 PKEDAEVVKKLTEAQALILGKVNLSELANYMSIKAPSGYSSKHGQTLNPYGPL----KIT 241 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 242 PSGSSSGSAASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 301 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 302 DTVGPIARSVVDAA------QGYNAFKKDTV--PRIDSTKFTKNNLQGQRIGLLE----- 348 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 349 --MPSAEEEFTAAKKALQKAGAEVIPLT--------PDMEGIDGGKVISNEFKFALEEFA 398 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 399 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 450 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 451 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 490 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 491 AKNSEGQPYGLTFTQTANKEQTLF 514 >gi|163739679|ref|ZP_02147088.1| amidase [Phaeobacter gallaeciensis BS107] gi|161387138|gb|EDQ11498.1| amidase [Phaeobacter gallaeciensis BS107] Length = 480 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 131/505 (25%), Positives = 213/505 (42%), Gaps = 50/505 (9%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S++ ++ +E R + D++A V + + + N +NA +E ++ +A A++ DK Sbjct: 4 SDIWRLSATELSRRTTAGDLTAEAAVAASLTRMTAVNPDLNAVVEDLSSEALGRAQQLDK 63 Query: 62 -RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R L G+P+ IK G T L ++ V + L D GAV++G Sbjct: 64 ARASGAPCGPLHGVPVTIKINVDQAGHATSNGVSALKDLIAADDAPVVKNLQDAGAVVIG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N EF+ + + +G +PW +PGGSSGG+ AAV + A + G D Sbjct: 124 RTNTPEFSFRADTDNPLHGRTHNPWGR-----HISPGGSSGGAGAAVMAGIGALAHGNDI 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILL 232 GGS+R PA+ G V +KP GR + GI+ A ++ G++TRT +D + + Sbjct: 179 GGSLRFPAAANGAVTVKPGLGRVPAWNPSQSAERGIL--AQNMSVQGLLTRTAQDLHLSM 236 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 ++ D D ++P+P + + D I+ V KE L P +D + + L Sbjct: 237 PSLIAPDPRDP--FHVPLPWHGASPDGPIR---VAFSKETYGYDLHPEVDAALEDARAAL 291 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 DAG + E LP +D R G R ++ + + Sbjct: 292 SDAGYLVEETVLPDV---------------------FDAGRTGYRALMGEVYALMKGDVD 330 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 Q V R + Y + L+ RT RD++ F Q ++LTP P Sbjct: 331 AAGSQTV--RDIFAVYFEEFPPFAGVELLQMMAKRTQYARDWS-LFMQRYPLVLTPFLPQ 387 Query: 412 SAF-PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQP 467 F P E +G + V++ A+N GLPA SVP+ L E P+ +Q+ Sbjct: 388 PFFRPDRDTEGAAGVHEVLGCAVYSYAMNFLGLPAASVPSRLAELPSGPQPINVQIAAPR 447 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 +RE+ IE G W Sbjct: 448 WREDMAVDACLAIEDRIGRMCDQLW 472 >gi|237798727|ref|ZP_04587188.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806160|ref|ZP_04592864.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021580|gb|EGI01637.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027273|gb|EGI07328.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 457 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+PI KD F G T A + + + P ++ L +G V LGK N+ EFA Sbjct: 74 DGVPIAWKDLFDVAGSVTTAGAAVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P DST + PGGSS GS+ AVA + ++GTDT GSIR PA+F Sbjct: 134 GLGLNPHFGTPINPLS--DSTPRI-PGGSSSGSAVAVAAGIVPIAMGTDTAGSIRVPAAF 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSIGPLTRSVRDALVI 231 >gi|322434279|ref|YP_004216491.1| Amidase [Acidobacterium sp. MP5ACTX9] gi|321162006|gb|ADW67711.1| Amidase [Acidobacterium sp. MP5ACTX9] Length = 632 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 129/536 (24%), Positives = 216/536 (40%), Gaps = 101/536 (18%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L F V E + LR+K ++ L Y+ ++ +S+++ I + ++A A ++D+ I Sbjct: 145 LAFATVRELAELLRTKRVTPTTLTRMYLARLKRLDSRLHFVITLTEERALKQAAQADQEI 204 Query: 64 INGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R L GIP G KD A KG T + + ++ V ++L GA+++ KL Sbjct: 205 AAGHYRGPLHGIPWGGKDLLAVKGYPTTWGAAGFEHQTFDEDAEVVKRLDAAGAILIAKL 264 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 +M A G + + G +PW + + G +S S+ VA +IGT+T G Sbjct: 265 SMGALAQG---DLWFGGRTRNPWNPRQGSSGSSAGSASATSAGCVA-----FAIGTETLG 316 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI P++ G G++PTYG R G ++ + S+D+ G I R+V D A++L I G D D Sbjct: 317 SISSPSTRCGVTGLRPTYGFVPRTGAMALSWSMDKIGPICRSVEDCALVLSVITGPDGHD 376 Query: 243 ATCV-------------NLPVPDYERALDQ----SIQGMTVGIPKE----------YRLD 275 L V + A D ++ T G E + + Sbjct: 377 LAVKPAAFNWDAEFDWRKLRVGFIKSAFDAPTMPELKAPTAGGDTEMEAYKKRVTRMQAN 436 Query: 276 YLSPTIDKTWQQ-GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 + T D + Q +S L G +V + +P +A + P + A +D Sbjct: 437 LVRTTYDAQFNQAALSQLTKMGVHMVPVEMPKLPFA-----AMVPVLEAEGAAAFD---- 487 Query: 335 GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDF 393 L G+D L + F R+ +R Y + Y++A + RTL + Sbjct: 488 ELTRSGRDKLLTGQQP----FDWPNNFRV--------ARFYSAVDYIQAMRARTLAIKAM 535 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC 453 E F Q VDVI+TP+ + A N+ G PA+ VP L Sbjct: 536 AELFTQ-VDVIVTPS----------------------QGIQLTATNLTGYPAVIVPNGLR 572 Query: 454 EKK-------------------MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 P+ L +G + + L + + ++ G+ + H Sbjct: 573 GTDAPPSPNDADGALDNTGGPGTPVSLTFLGNLYSDARLAAFARAYQQATGFHKQH 628 >gi|300705048|ref|YP_003746651.1| glutamyl-tRNA amidotransferase/amidase (gata) [Ralstonia solanacearum CFBP2957] gi|299072712|emb|CBJ44065.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia solanacearum CFBP2957] Length = 448 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 20/237 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ IKD F G + A S L P ++ +L GAV+LG+ NM EFA Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGSRALAHQPPATADAVAVARLRAAGAVLLGRTNMSEFAF 132 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P D T GGS+ G + VAG + A++GTDTGGSIR PA+ Sbjct: 133 SGLGLNPHYG---TPRTPADGTRAA--GGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G KPT R G + + SLD G + +V D ++ A+ D V L Sbjct: 188 FCALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSV-DCCAIVDAVLSGQALDTDAVPL- 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 G+ +G+ ++Y L T+ +Q+ + L+ AGA+IV P Sbjct: 246 ------------AGLRLGLTRDYVGADLDDTVATAFQRAVMRLEQAGARIVRFDFPE 290 >gi|226294701|gb|EEH50121.1| acetamidase [Paracoccidioides brasiliensis Pb18] Length = 545 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 134/531 (25%), Positives = 204/531 (38%), Gaps = 105/531 (19%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 +V + RL +++A ++ +YI+ ++ NA EV+ +A A E D+ G Sbjct: 59 SVEQLHGRLCRGELTATDVTLAYIKRATVAHQLTNAITEVMFDEALKQARELDRSFKETG 118 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNM 124 + L GIP+ +KD F +G T ++ F P E +T+ Q L GA+M+ K N+ Sbjct: 119 KVKGPLHGIPVSLKDQFNVRGFDT-TLGYVGRSFSPAAEDATLVQILKSLGAIMIAKTNL 177 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 + M E +G ++P S KFTPGGSSGG SA +A GTD GGSI Sbjct: 178 PQSIMWCETENPLFGLTVNPRNS-----KFTPGGSSGGESALLALHASILGFGTDIGGSI 232 Query: 185 RQPASFTGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGY 238 R P G G+KP+ R GI PS G +TR + + K +A Sbjct: 233 RIPQHMLGLYGLKPSSARLPYHGIPVSTEGQEHVPS--SVGPMTRDLSSLIYISKHLANS 290 Query: 239 D--ECDATCVNLPVPDYERALDQSIQGMTVGI-------------PKEYRLDYLSPTIDK 283 D C LP + + Q IQ + I P E L LS + Sbjct: 291 QPWHLDPRCSPLP---WRDEVFQEIQSRPLAIGLIVDDGVVKVHPPIERALRELSAKLQA 347 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 + + W D + +EI + A+Y E +R +R G+ Sbjct: 348 AGHEIVPWNADGHQECIEI--------MDAFYTADGGE---------DIRRDVRAAGEPF 390 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG--V 401 + E + G V + L+ R + A + R L K + A G V Sbjct: 391 IPHVEKLVNKGSPISVYE-----YWQLNRRKW------AAQKRYLDKWNGARAPLSGRAV 439 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-LCEKK---- 456 DV+L PT P + P +G +T N A++ PA +C K+ Sbjct: 440 DVLLAPTMPHVSVP----HRCCRWVG------YTKVWNFLDYSALTFPAGEVCAKRDGLP 489 Query: 457 -------------------------MPLGLQLIGQPFREETLFSVGQIIEK 482 P+ LQ++ + EE + +IEK Sbjct: 490 KTPYQPRNALDEWNWGLYDLEAMAGHPVNLQIVARKLEEEKVLGAAVVIEK 540 >gi|126728593|ref|ZP_01744408.1| putative glutamyl-tRNA(Gln) amidotransferase subunit [Sagittula stellata E-37] gi|126710523|gb|EBA09574.1| putative glutamyl-tRNA(Gln) amidotransferase subunit [Sagittula stellata E-37] Length = 441 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 12/229 (5%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQK---ARAAAEESDKRIINGDARDLEGIPI 76 D VE+++++++ I+ + +NA+ A ARAA E G L+G+P+ Sbjct: 23 DADPVEVMENHLETIDRRDRDLNAFSARAADVRDLARAARERWQAGAPLGP---LDGVPV 79 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD + G+ + L P ++ L GA++LGK N EFA+ + Sbjct: 80 IVKDNLVSAGLPAAWGNPELGRRVPEHDEDPIAALRGAGAIVLGKGNTPEFAVEGYTANA 139 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G +P+ TPGGSSGG AAVA + A IGTD GGSIR+PA +TG G+ Sbjct: 140 AFGVTRNPFDP-----ALTPGGSSGGVVAAVASGMAVAGIGTDGGGSIRRPAGYTGLWGL 194 Query: 197 KPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 KP G R G+ + G ITR+ RD A+ +AG AT Sbjct: 195 KPGIGSVPRGKGLPQVLLDFETVGPITRSARDLALFHGVLAGRTVTSAT 243 Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%) Query: 423 SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G GH V+T VN AGLPA++ PA +P+G+QL+G+ E+ L + ++ Sbjct: 386 AGPRGHA---VYTGWVNAAGLPALAFPAKPA-NGLPIGMQLVGRLGGEDLLLGIAATLD 440 >gi|307192993|gb|EFN75981.1| Fatty-acid amide hydrolase 2 [Harpegnathos saltator] Length = 525 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 126/495 (25%), Positives = 223/495 (45%), Gaps = 51/495 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE- 72 +R ++I++ ++V +Y + I+ N +NA ++ A A+ D+++ G DA LE Sbjct: 49 IRQREITSYQVVYTYTERIKEVNRVLNAVVDNRFGPAIIQAKICDEQLAAGKFDAETLEK 108 Query: 73 -----GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 G+PI IK+C A KG+ S I G + +S V + L++ GA+ L N E Sbjct: 109 EKPLYGVPITIKECCAVKGLSYTGGSLIRKGIKATADSAVIELLYNAGAIPLCVTNTPEM 168 Query: 128 AMGSSNETSYYGPVISPWRS-MDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 + YG ++P+ + + G+ GS A++ G IG+D GSIR Sbjct: 169 SSNFDTWNLVYGATLNPYDTRYSAGGSSGGEGALLGSGASLIG------IGSDVAGSIRI 222 Query: 187 PASFTGTVGIKPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 PA F G G KPT G S G I +F L G +TR D ++L++ +A + Sbjct: 223 PAIFNGVFGHKPTNGIISTRGHIPECKDETFQRYL-TFGPMTRYAEDLSLLMRVLA--SD 279 Query: 241 CDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG--A 297 CD + L VP D ++ +Q + + + +SP I + + + G Sbjct: 280 CDRD-LRLTVPVDLKQLKVYYLQ----NVDNSFGILPVSPEIQQCVFKAAHHFEQLGLHT 334 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYD--GVRYGLRVEGKDILEMYENTRSIGF 355 + + I+ P T + A ++S E L D G + K + + T+S F Sbjct: 335 EKLPINWPATIAEMGAASLLSMKEPPQILLSSDPKGRKNPAMELMKSLFCQPQYTKSAIF 394 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAF 414 ++ ++ ++ S+Y + ++ ++R+ + GV + T PT+ Sbjct: 395 -----FSFLLESHFPFAKSSLSYYTKHAEV---VRRELLNLLGDNGVFIYPTFRCPTTFR 446 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 L E + S I+N VF G PA+ VP L ++ +P+G+Q+I P+++ F Sbjct: 447 RLILLEFINCSYATIFN-VF-------GFPALHVPMGLNDEGLPIGVQVIAAPYQDRLCF 498 Query: 475 SVGQIIEKEAGYFRP 489 +V + +E G + P Sbjct: 499 AVAKELETAFGGWTP 513 >gi|225561555|gb|EEH09835.1| glutamyl-tRNA amidotransferase subunit A [Ajellomyces capsulatus G186AR] Length = 624 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 106/419 (25%), Positives = 187/419 (44%), Gaps = 52/419 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 ++G+P+ IKD +G S + + S +K + GA+++GK +M E +G Sbjct: 179 MDGVPVAIKDEAHLEGYKRTLGSRFDFTGKINSTSWCVKKWEEAGAIVVGKTSMHELGLG 238 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++N P R+ + D +T GGSSGGS+ V L ++G D GGSIR P+ F Sbjct: 239 TTNNN----PCTGTPRNPHNQDYYT-GGSSGGSAYVVGAGLVPIALGADGGGSIRLPSGF 293 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G GIK T+GR S + A + G +T ++ D A+ + +A D + P Sbjct: 294 CGIYGIKTTHGRVSAHPTLRIASTTGVLGTMTSSLDDLALSYRLMASPDPDSMESSSFPD 353 Query: 251 P--DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + + + +GI ++ ++ P + + + I + +V+IS+P Sbjct: 354 PLSTIPSSSALAARPKVIGIFPDW-VNRADPAVLALFNKAIDHYRTKNYTVVDISIPLLA 412 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A+ + AE SS + + D +R L + K ++ + N S Sbjct: 413 EGQKAHSLTILAEISSTV-KPDQIRQ-LTPQNKILVSLGANQASA--------------- 455 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPTSAFPLGK--------- 418 +L A+++R+L+ F++ +I+TPTTP + + K Sbjct: 456 --------PDFLAAQRLRSLLMSHLAFLFQKHPGLIIVTPTTPMPGWKIAKGDADLVSGV 507 Query: 419 -EENNS-GSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREETLF 474 +EN+S +M ++Y N G PA+S P L + ++P+GL +G+ EE L Sbjct: 508 SDENSSLRAMEYVY------LANFTGCPALSRPMGLIDGPQVPVGLMGMGEWCSEEMLI 560 >gi|229548682|ref|ZP_04437407.1| amidase [Enterococcus faecalis ATCC 29200] gi|256761505|ref|ZP_05502085.1| glutaminyl-tRNA synthase [Enterococcus faecalis T3] gi|256957395|ref|ZP_05561566.1| glutaminyl-tRNA synthase [Enterococcus faecalis DS5] gi|256964427|ref|ZP_05568598.1| glutaminyl-tRNA synthase [Enterococcus faecalis HIP11704] gi|257077609|ref|ZP_05571970.1| glutaminyl-tRNA synthase [Enterococcus faecalis JH1] gi|257420995|ref|ZP_05597985.1| amidase [Enterococcus faecalis X98] gi|294779941|ref|ZP_06745322.1| amidase [Enterococcus faecalis PC1.1] gi|307269790|ref|ZP_07551120.1| amidase [Enterococcus faecalis TX4248] gi|307272550|ref|ZP_07553803.1| amidase [Enterococcus faecalis TX0855] gi|312953121|ref|ZP_07771970.1| amidase [Enterococcus faecalis TX0102] gi|229306198|gb|EEN72194.1| amidase [Enterococcus faecalis ATCC 29200] gi|256682756|gb|EEU22451.1| glutaminyl-tRNA synthase [Enterococcus faecalis T3] gi|256947891|gb|EEU64523.1| glutaminyl-tRNA synthase [Enterococcus faecalis DS5] gi|256954923|gb|EEU71555.1| glutaminyl-tRNA synthase [Enterococcus faecalis HIP11704] gi|256985639|gb|EEU72941.1| glutaminyl-tRNA synthase [Enterococcus faecalis JH1] gi|257162819|gb|EEU92779.1| amidase [Enterococcus faecalis X98] gi|294452990|gb|EFG21411.1| amidase [Enterococcus faecalis PC1.1] gi|306510835|gb|EFM79852.1| amidase [Enterococcus faecalis TX0855] gi|306513900|gb|EFM82502.1| amidase [Enterococcus faecalis TX4248] gi|310628955|gb|EFQ12238.1| amidase [Enterococcus faecalis TX0102] gi|315036115|gb|EFT48047.1| amidase [Enterococcus faecalis TX0027] gi|315146947|gb|EFT90963.1| amidase [Enterococcus faecalis TX4244] gi|315153968|gb|EFT97984.1| amidase [Enterococcus faecalis TX0031] gi|327534326|gb|AEA93160.1| amidase [Enterococcus faecalis OG1RF] Length = 528 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 120/444 (27%), Positives = 199/444 (44%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANNEQTLF 495 >gi|332521167|ref|ZP_08397625.1| Amidase [Lacinutrix algicola 5H-3-7-4] gi|332043260|gb|EGI79457.1| Amidase [Lacinutrix algicola 5H-3-7-4] Length = 549 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 24/235 (10%) Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM--- 129 G+PI +KD TKG+ T A + L + ++ + ++L +GA++LGK N+ E+A Sbjct: 156 GMPILLKDNINTKGMATTAGAIALSNNQTE-DAFIVERLKSHGAIILGKANLSEWAYFFC 214 Query: 130 --GSSNETSYYGPVISPW--RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 S ++ G ++P+ R +D+ GSS GS AVA C A+IG++T GSI Sbjct: 215 GDCPSGYSAVGGQTLNPYGRRIIDTG------GSSSGSGVAVAANFCVAAIGSETSGSIL 268 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PAS VG KPT G SR GI+ + +LD AG IT+ V D+AI+L A+ GYD+ D+ Sbjct: 269 SPASQNSVVGFKPTVGLLSREGIVPISSTLDTAGPITKNVTDNAIVLDAMLGYDKADSKS 328 Query: 246 VNLPVPD---YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 + + ++ + +QG +G K D L + ++ LK GA Sbjct: 329 IKTDSTNGYYFQNYNKKDLQGKRLGAYKRLLKDSL-------YSNALTVLKAQGA 376 >gi|146161512|ref|XP_001007350.2| Amidase family protein [Tetrahymena thermophila] gi|146146722|gb|EAR87105.2| Amidase family protein [Tetrahymena thermophila SB210] Length = 614 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 123/559 (22%), Positives = 239/559 (42%), Gaps = 97/559 (17%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN-SQMNAYIEVVAQKARAAAEES 59 M ++ +V++ ++ L+ ++S+ +LV+ Y Q + E + A A E Sbjct: 82 MDQILNSSVAQLKEMLKKNEVSSEDLVNIYSHRCRKIGLKQFHCITEFDYENAIKLAREL 141 Query: 60 DKRIING----DARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHY---ESTVTQKL 111 D++ + D + L GIPI IKD F KG+ T C + R +Y E ++ KL Sbjct: 142 DQQRLQDFNIVDTKPLYGIPISIKDFFDVKGMPSTVGCIN-----RINYIAQEDGLSVKL 196 Query: 112 WD-NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 +G + K N+ + M + YG ++PW D T PGGSSGG + VA Sbjct: 197 IKMSGGIPFVKTNVPQLGMSFESANRIYGRTLNPW---DKTR--YPGGSSGGEAVCVATR 251 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-------QAGIITR 223 IG+D GGSIR PA+F G KPT GR G+ ++ + + G I + Sbjct: 252 CSPIGIGSDLGGSIRSPANFNGIYAFKPTSGRIPLQGLTRYSKTQNGETNVRTSIGPIAK 311 Query: 224 TVRDSAILLKAIAGYDECDATCV-----NLPVPDYERAL-DQSIQGMTVGIPKEYRLDYL 277 +V D + ++A+ + + + VP ++ L +Q+ + + +G K ++ + Sbjct: 312 SVDDCILFMEALNNKEVLNMKLYESLLHQMYVPFDQKLLHEQTSKKLKIGYFKT--MEPI 369 Query: 278 SPTI--DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG 335 T+ + Q + L++ G ++VEI +P+ + + YI +S NL ++ Sbjct: 370 DATLANQRAVQITVDALRELGHEVVEIEIPNIERLV---YIFFKVTSSDNLKGFED---- 422 Query: 336 LRVEGKDILEMYENT-----------RSIGF-----GQEVKHRIMIGTYVLSSRCYDSHY 379 ++ +D +E+Y+ T R++ G+ K++I+ ++ + Y Sbjct: 423 -QLGDEDYVEVYKPTLAPLYFPKFLKRALEILLKLVGETRKYKIL---SIMKQQPTAEDY 478 Query: 380 LRARKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 LR ++K+ + E Q ++ I+TP A ++ S + + Sbjct: 479 LRMSDEILILKKQVLKYLEDQNIEAIITPCFAAPAL------KHTISAKTVLTTSYLYIW 532 Query: 439 NMAGLPAISVPAALCEK--------------------------KMPLGLQLIGQPFREET 472 N+ PA +P + K+P+ +Q++ P ++E Sbjct: 533 NVLNFPAGVLPITEVHEDEQHYNNSRIQDSMTRVINENMKGTAKLPVNVQVVTLPNKDEL 592 Query: 473 LFSVGQIIEKEAGYFRPHK 491 ++ + I+ + +++ K Sbjct: 593 CLNLMKQIDNKVQFYKNRK 611 >gi|312900332|ref|ZP_07759643.1| amidase [Enterococcus faecalis TX0470] gi|311292520|gb|EFQ71076.1| amidase [Enterococcus faecalis TX0470] Length = 528 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 119/444 (26%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q + A + D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQVIKEA-KAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLIEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|310815915|ref|YP_003963879.1| amidase [Ketogulonicigenium vulgare Y25] gi|308754650|gb|ADO42579.1| amidase [Ketogulonicigenium vulgare Y25] Length = 462 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 123/495 (24%), Positives = 217/495 (43%), Gaps = 52/495 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MSE+ E+ +K +S VE + + I +E S ++ A +++ AAA ++ Sbjct: 1 MSEILDKTARETIAAFTNKQLSPVEYMQALITRVEASEPKVGALYAFKPEESLAAARAAE 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G L+G+PI +K+ ATKG + +D ++ +L ++GA++ Sbjct: 61 ARYMAGAPMGRLDGMPISVKELIATKGDPIPLGTAAVDLVPATEDAPTAARLKEDGAIIF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K ++ M SS ++++ +PW+ ++T SS G++AA A IGTD Sbjct: 121 AKTTCPDYGMLSSGLSTFHQLSRNPWKLSENTGG-----SSAGAAAAAAAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAG 237 GGS+R PA +TG G KP+ GR + P + AG +T TV D+A ++ + Sbjct: 176 IGGSVRLPAGWTGLFGFKPSLGR------MPIDPYMTGRCAGPMTPTVDDAAFVMPTVTR 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWL 292 D DAT + D++ ++G+ +G+ LD P + Q Sbjct: 230 PDWRDATSLPYEALDWDVPA-ADVRGLKIGL----MLDAGCGIDAEPEVIAAVQAAADLF 284 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENT 350 GA+I+ ++ T+ L + + AR+ G L E + ++ +Y+ Sbjct: 285 AAHGAEIIPVAPVLTREMLDGLDV-------AWRARFWGKMELLSPEKRALVLPYIYDWA 337 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 ++ G + V +R +D + ++R E F Q VD+IL+P P Sbjct: 338 KNGGDARAVD----------VARGFDQTF--------EMRRTSVEVF-QKVDIILSPVNP 378 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 ++P + + FTV NM PA S+ MP+GLQ++ F + Sbjct: 379 NVSYPADWASPTNDPAKPFEHICFTVPWNMGEQPAASINCGYSSTGMPIGLQIVASRFED 438 Query: 471 ETLFSVGQIIEKEAG 485 +FS+ + E G Sbjct: 439 LKVFSIAKAYENWRG 453 >gi|315156762|gb|EFU00779.1| amidase [Enterococcus faecalis TX0043] Length = 528 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 25/268 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+ ++ + L+ AGA+++ ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT 355 >gi|330982302|gb|EGH80405.1| Amidase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 597 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%) Query: 32 QAIENSNSQMNAYIEV-----VAQKARAAAE----ESDKRIINGDARDLEGIPIGIKDCF 82 Q N + NA++ + + ++AR A + D+R G A L GIP GIKD F Sbjct: 76 QETYGDNGKYNAFVRLEDFSTLLEQARLADQWLTTPDDQR---GPAPPLCGIPFGIKDSF 132 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 A +G+ ++ + G ++T +L GA+++G E + + + + G Sbjct: 133 AIQGLESKNGTQAFSGNLALRDATCVARLRAQGALIIGHTICSELSTHTVGQ--FAGNAW 190 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P R TPGGSS GS A LCAA++G +T GSI PA+ G IKP+ G Sbjct: 191 DPIR--------TPGGSSQGSGVAPIARLCAAALGEETAGSIIIPAAANGASAIKPSLGL 242 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPDYERALDQS- 260 S G++ D G + R++RD++++L IAG D E D ++ P + ++ + Sbjct: 243 VSGAGVMPLRSGWDVVGPMARSIRDASLILSIIAGPDGENDPQSLSAPSIGEQLSITPTP 302 Query: 261 ----IQGMTVGIPK 270 +QG+T+GIP+ Sbjct: 303 GSLPLQGLTIGIPQ 316 >gi|170694850|ref|ZP_02886000.1| Amidase [Burkholderia graminis C4D1M] gi|170140210|gb|EDT08388.1| Amidase [Burkholderia graminis C4D1M] Length = 508 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 132/279 (47%), Gaps = 19/279 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +LN + V + ++ +A +L + IE N + NA I + A A D+R Sbjct: 10 DLNALTVEAVQAGFKAGTFTAEQLARACFARIERDNEKYNAVI-FLNPAAIDDARRIDER 68 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNG 115 G+ L G+P+ IKD G T A L P ++ V ++ G Sbjct: 69 RAAGEVLGPLAGVPVVIKDPMDMVGFPTTAGWSKLYSKKGGVDLMPERDAPVVARMRRAG 128 Query: 116 AVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 A++LGK N+ + GS S+ GP I+ + D+ PGGSS G+++AVA + Sbjct: 129 AILLGKTNVPILSHTGSHANDSWAGPTIN----VVMPDR-VPGGSSAGTASAVASGMAVL 183 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + +TGGSI+ PAS VGIKPT G G++ + + D G I R VRD+A+ L Sbjct: 184 GLAEETGGSIQNPASAQNLVGIKPTIGLVPNAGVVPLSGNRDVVGPIARNVRDAALCLDV 243 Query: 235 IAGYDECD----ATCVNLPVPDYERALD-QSIQGMTVGI 268 +AGY D A+ P Y ALD ++ G +G+ Sbjct: 244 LAGYSSEDPKTLASVGRQPEGGYTAALDWNALNGKRIGL 282 >gi|27378340|ref|NP_769869.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium japonicum USDA 110] gi|27351487|dbj|BAC48494.1| blr3229 [Bradyrhizobium japonicum USDA 110] Length = 475 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 125/492 (25%), Positives = 217/492 (44%), Gaps = 52/492 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++ +E R + K IS VE+ + + E Q+N +I + +A AAA +++R++ Sbjct: 9 LLSATELRGLIADKRISPVEITRAVLARAEALQPQLNCFITICGDEAMAAARAAERRVMA 68 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G+ L GIP +KD T+G+ T + P ++ +L GA+++GK Sbjct: 69 GEPLGLLHGIPYTVKDIVNTRGVKTTFGAVPYKDNVPVEDAVAVARLRSEGAILIGKTTT 128 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EF ++ +G + W + S+ SSGG++ AVA + ++ TD GGS Sbjct: 129 PEFGSKCLTDSPLFGRTRNAWDACRSSGG-----SSGGAAVAVASGIAPLAVATDGGGST 183 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG------IITRTVRDSAILLKAIAGY 238 R PA+ G VG+K + GII + +LD G TRTV D+A++++A+AG Sbjct: 184 RIPAACNGVVGLKQSN------GIIPHSQALDVFGNQTYVTPTTRTVADTALMMQAMAGE 237 Query: 239 DECDATCVNLPVPDY--ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D CD + +PV D+ A ++G+ + +S + +++ + L G Sbjct: 238 DPCDPWSIGVPVSDFVGTAAPRGDLRGLRILYCLTPPGRPVSAEVAASFRASLDRLAGLG 297 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 A++ E S + I P + N + L E KD E+ E Sbjct: 298 AELEEFS--------GEGFDIEPIWRAINHTVWRTRFAKLAAEHKD--ELSEA------- 340 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + L++ Y A RT + R +G + PT SA P+ Sbjct: 341 -------FLKQLALATEVSGVDYQEAMFARTALFRRVQSLLARG-HFLAMPTLTRSALPI 392 Query: 417 GKEENNSGSM-GHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 ++ + + G ++ V +T+ NM G PA+S+P+ +P+GLQL+G+ Sbjct: 393 KQDLFGTIEIDGRHFDSVRPHWFPWTMPFNMTGHPAVSLPSGFGRDGLPIGLQLVGRFRA 452 Query: 470 EETLFSVGQIIE 481 + L V + E Sbjct: 453 DAELLRVSTLFE 464 >gi|222106660|ref|YP_002547451.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] gi|221737839|gb|ACM38735.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4] Length = 464 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 135/521 (25%), Positives = 213/521 (40%), Gaps = 104/521 (19%) Query: 1 MSELNFMAVSESRDRLRSKDISAVEL---VDSYIQAIENSNSQMNAYIEVVAQKARAAAE 57 M++L + + E +K +S + V++ I A E S + Y ++ ARA A Sbjct: 1 MTDLVDLTIRELIAAFSAKTLSPEDYWNAVEARIDAFEPSVQALYLYD---SESARAQAR 57 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S R G A L+GIP+ +K+ AT+G + +D ++ + ++ ++GA Sbjct: 58 ASTDRWQRGAALGPLDGIPVSLKELIATRGQPVPLGTAAVDLVPAAADAPIAARMREDGA 117 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V+ K ++ M SS +S++ +PW + PGGSS G++AA A I Sbjct: 118 VIFAKTTCPDYGMLSSGLSSFHPLSRNPWDLSQN-----PGGSSAGAAAAGAAGFGPLHI 172 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKA 234 GTD GGS+R PA +TG G KP++GR I P AG +TR V D+A + Sbjct: 173 GTDIGGSVRLPAGWTGLFGFKPSHGR------IPVDPYYVGRCAGPMTRCVDDAAYSMIT 226 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQ--GMTVGI----------PKEYRLDYLS---- 278 +A D D T +LP P+ LD+ I GM +G+ E R ++ Sbjct: 227 LARPDWRDGT--SLP-PETINWLDEDIDISGMKIGVMLDAGCGLAAEPEVREAIIAAAKR 283 Query: 279 ------------PTIDKTWQQGIS--WLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 P +++ G+ W I +S Q LP YI AE + Sbjct: 284 FEAAGAEVFEVGPVMNRAMLDGLDVFWRAKFWGDIAALSTEKRQMILP--YIYEWAEGGA 341 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 N++ D V+ GFGQ ++ R G Sbjct: 342 NVSGVDAVK--------------------GFGQTIEMRKTCGAL---------------- 365 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLP 444 FT VD +L+P P ++P + + FTV NM+ P Sbjct: 366 --------FTR-----VDAVLSPVNPVVSYPAEWASPTNDPQKPFEHIAFTVPWNMSEQP 412 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 A S+ MP+GLQ++G F + T+ + ++ E G Sbjct: 413 AASINCGFSNSGMPIGLQIVGPRFGDLTVLKLSKLFESWTG 453 >gi|225554305|gb|EEH02605.1| acetamidase [Ajellomyces capsulatus G186AR] Length = 545 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 129/518 (24%), Positives = 201/518 (38%), Gaps = 103/518 (19%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGDAR-DLEGIPIG 77 + +A ++ +YI+ ++ NA E+V ++A A E D+ G R L G+P+ Sbjct: 71 EFTAEDVTLAYIKRATVAHQLTNALTEIVFEEALEQARELDRSFKTTGKVRGPLHGVPVT 130 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F KG+ T ++ F P E V Q L GA+++ K N+ + M E Sbjct: 131 LKDQFNIKGVDT-TLGYVGRSFCPAAEDAVLVQILKSLGAIIIAKTNLSQSIMWCETENP 189 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G ++P S KFT GGS+GG +A +A IGTD GGSIR P + G G+ Sbjct: 190 LFGLTVNPRNS-----KFTSGGSTGGENALLALHGSILGIGTDIGGSIRIPQNMVGLYGL 244 Query: 197 KPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGYD--ECDATCVNL 248 KP+ GR G+ PS G +TR + + K +A D C L Sbjct: 245 KPSSGRFPYYGVPVSTEGQEHVPS--SVGPMTRDLPSIIYVTKHLANSQPWTLDPRCAPL 302 Query: 249 PVPDYERALDQSIQG--MTVGI-----------PKEYRLDYLSPTIDKTWQQGISWLKDA 295 P + + IQ + +G+ P + L LS + + I W D Sbjct: 303 P---WRNEIFTEIQSRPLIIGLIVDDGVVKVHPPIQRALHELSAKLQGAGHEVIPWKTDG 359 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 + V+I + AYY + E +R + V G+ L E + G Sbjct: 360 HQECVDI--------MDAYYTVDGGE---------DIRNDVMVAGEPFLPHVEKLVNKGK 402 Query: 356 GQEVKHRIMIGTY-VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V + V + Y + R R + + VDV+LTPT P A Sbjct: 403 AISVYQYWQLNRRKVAVQKGYLDKWNRTR----------APSSNRTVDVLLTPTMPHVAV 452 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-LCEKK----------------- 456 P +G +T N A++ PA +C++K Sbjct: 453 P----HRCCRWVG------YTKVWNFLDYTALTFPAGKVCKEKDKLPVTPYEPRNELDEW 502 Query: 457 ------------MPLGLQLIGQPFREETLFSVGQIIEK 482 P+ LQ++G+ EE + +IEK Sbjct: 503 NWGLYDADSMAGYPVNLQIVGKKLEEEKVLGAAVVIEK 540 >gi|311696434|gb|ADP99307.1| amidase signature enzyme [marine bacterium HP15] Length = 470 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 116/443 (26%), Positives = 188/443 (42%), Gaps = 45/443 (10%) Query: 45 IEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP-H 102 +E + + + A A S+KR +N + L +GIP G+KD +G T S + P Sbjct: 51 VEPLGETSLAQARSSEKRYLNDEQFGLLDGIPFGVKDLIDVEGCTTSRGSLLYRNAPPAK 110 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 + ++L G V GK N+ E A +G SP +T K+ GGSS G Sbjct: 111 RNAEAVERLGFQGMVFGGKTNLSELAFSGVGTNDLFG---SPINPRATTGKYITGGSSSG 167 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S+A VA L S+GTDT GS R PA+F G VG KP++ R G+ APSLD GI Sbjct: 168 SAAGVASGLWPVSLGTDTSGSSRIPAAFCGVVGFKPSFDRYPLRGVAPLAPSLDHLGINA 227 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 TV+D IL +A+ G P+P + R L + + + +P+ + P I Sbjct: 228 LTVQDCVILDQALRGLA---------PIPKF-RMLSEQTEFL---VPRNKSIQPRDPHIK 274 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD 342 + + + L + G +I E+ + I A +Y+ Sbjct: 275 DNFDKTLDLLSNLGFEIHEVDFSPYAEVDRLFEIHGSLVAHEAAQQYEA----------- 323 Query: 343 ILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 ++EN + ++ R+ GT +L+ + Y +KIR ++ + + + G Sbjct: 324 ---LFENGLTSYIDPKILQRLKEGT-LLNRKSYA----LLQKIRRNLRAELSSSI--GNK 373 Query: 403 VILTPTTPTSAFPLGKEENNSG-SMGHIYNDVF---TVAVNMAGLPAISVPAALCEKKMP 458 ++L PT P E G +N + T+ N G+PAI++P Sbjct: 374 ILLQPT--VKILPPAIESVLKGVEEFKAFNKLILGNTMYANYLGMPAIAIPIGHAPNGFS 431 Query: 459 LGLQLIGQPFREETLFSVGQIIE 481 +QL +++ L +E Sbjct: 432 TSIQLSAASGKDDFLLKTALFLE 454 >gi|84515145|ref|ZP_01002508.1| amidase family protein [Loktanella vestfoldensis SKA53] gi|84511304|gb|EAQ07758.1| amidase family protein [Loktanella vestfoldensis SKA53] Length = 442 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 115/226 (50%), Gaps = 12/226 (5%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIK 79 I V+L + Y+ AI+ + Y V +ARA A+ + +R +G R L+G+P+ K Sbjct: 21 IDPVDLTEVYLAAIDAHEHRDRIYARVTHDRARAEAKAASERAASGFRRGPLDGVPVSWK 80 Query: 80 DCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSY 137 D F + GI T+A + +L G P ++ V + G V LGK +M E A N + Sbjct: 81 DLFNSAGIGTEAGTALLAGRVPERDAKVLETATAAGLVCLGKTHMSEIAFSGLGLNPITA 140 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGI 196 P ++ D G S +AA F L AA IGTDTGGS+R PA++ VG+ Sbjct: 141 TPPCVN--------DAGAVAGGSSSGAAASVAFGLAAAGIGTDTGGSVRIPAAWNDLVGL 192 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 K ++GR S G++ + D G + R+V D+A+LL + G D Sbjct: 193 KTSHGRLSLEGVVPLCLTFDTVGPLCRSVEDAALLLAVLEGSRPVD 238 >gi|271967457|ref|YP_003341653.1| amidase [Streptosporangium roseum DSM 43021] gi|270510632|gb|ACZ88910.1| amidase [Streptosporangium roseum DSM 43021] Length = 470 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 119/505 (23%), Positives = 212/505 (41%), Gaps = 54/505 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L ++ +E+ RS+++S VEL+ + I+ E ++NA E ++A A++++ Sbjct: 1 MTDLAYLPATEALRLFRSRELSPVELMTAVIERAEAVEPRVNALSERTFEEALLQAKQAE 60 Query: 61 KRIINGDARDLEGIPIGIKD------CFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 + +G R LEG+P+ KD AT G A +H+ P V +++ Sbjct: 61 RAYRDGSPRPLEGLPVAAKDEQPIAGRLATDGSLAYA-THVAGVTHP-----VIERVLAA 114 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 G ++ + EF + + +G +PW ++D + + GGS ++ A Sbjct: 115 GGIVHARTTTPEFCCAAFTHSRLWGVTRNPW-NLDYSPGGSSGGSGAALASGTATL---- 169 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + G+D GGSIR PA+ TGTVG KP YGR + + G + RTV D A+L Sbjct: 170 ATGSDIGGSIRLPAANTGTVGYKPPYGRVPAMPPFNLD-HYCHDGPMARTVADCALLQNT 228 Query: 235 IAGYDECDATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 I G D + V R DQ + G+ + + P I + L Sbjct: 229 IVGPHPGDVVSLRPAV----RIPDQLGDVTGLRIAYAPNLGDWEIEPGIAANTRAVADAL 284 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 AGA + E+ + L R D +R G M N + Sbjct: 285 TAAGAIVEEVEV--------------------GLRRADVMRAAFIHFGTIFGPMVANVAA 324 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + ++ + ++ +D +L ++ I ++ D ++ PTT Sbjct: 325 EHGDRLTRYALAFAAESRAAAEWDG-FLAGLEMEAAIYAVIGALLDR-YDALICPTTGAP 382 Query: 413 AFPLGKE------ENNSGSMGHIYNDVFTVAVNMAG-LPAISVPAALCEKKMPLGLQLIG 465 A G++ N + H + T N+A P ++VP+ +P G+Q++G Sbjct: 383 ALRAGEDYIDTKLTVNGVELDHYMDYSLTTVFNIASRCPVLNVPSGRAADGVPTGVQIVG 442 Query: 466 QPFREETLFSVGQIIEKEAGY-FRP 489 + + + T+F +G IE+ + FRP Sbjct: 443 RSYDDATVFQIGAAIERVRPWAFRP 467 >gi|294633302|ref|ZP_06711861.1| amidase [Streptomyces sp. e14] gi|292831083|gb|EFF89433.1| amidase [Streptomyces sp. e14] Length = 468 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 131/496 (26%), Positives = 209/496 (42%), Gaps = 56/496 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 +R++++SAVE+ S + IE +N ++NA E+ + A A +D+ + GD L G+ Sbjct: 5 IRTREVSAVEVARSCLARIEATNPRLNALFEIRPDEVLADARRADEAVAAGDPLGPLHGV 64 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ K +G T L G ++ L GAV+LG+ N F+ + Sbjct: 65 PVSTKINTDQRGHVTSNGVAALAGPPAKDDAACVAALRRAGAVLLGRSNAPAFSYRWFST 124 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G ++PW D+ TPGGSSGG+++++A + + G D GGSIR PA+ G V Sbjct: 125 NDLHGRTLNPW----DADR-TPGGSSGGAASSLAAGMTPLAQGNDIGGSIRYPAACCGVV 179 Query: 195 GIKPTYGRCS---------------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 G++PT GR S RL A + G + RTV D+ + L A+ D Sbjct: 180 GVRPTVGRVSNWAPPVYVDTPGGPTRLDFPLTAQACAVEGPLARTVADARLALHAMTTPD 239 Query: 240 ECDATCVNLPVPDYERALDQSIQGMT----VGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D V VP + QG T V + ++ P +D+ + L +A Sbjct: 240 LRDPFGVPA-VP--------ARQGETPRPRVALVRDIGTVGNHPAVDRALDTAAARLAEA 290 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G +I E + P +I+ A +L Y+ R ++ E Sbjct: 291 GYEIEEFAEPS---------LIAEAARIWSLLLYEDFR--------GMVPFVEQVGDEDI 333 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIR-TLIKRDFTEAFEQGVDVILTPTTPTSAF 414 + + V R Y++ R +LI R E Q ++LTP F Sbjct: 334 RTSLTYSFAAAAAVWGERPTLEAYIQGWARRGSLIAR-LQELLGQD-RLLLTPVAAELPF 391 Query: 415 PLGKEENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + ++ + AV + G PA+SVPA L E +P+G+QLI F E+ Sbjct: 392 EQDADLAGPARAAELLAAMWPMAAVPILGFPAVSVPALLAE-GLPVGVQLIAGRFAEDLA 450 Query: 474 FSVGQIIEKEAGYFRP 489 Q +E A P Sbjct: 451 LDAAQTVEDAAPRLAP 466 >gi|296817995|ref|XP_002849334.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma otae CBS 113480] gi|238839787|gb|EEQ29449.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma otae CBS 113480] Length = 611 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 125/484 (25%), Positives = 207/484 (42%), Gaps = 76/484 (15%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFR- 100 A+ E A AAAE S R G L +G+P +KD + G T C L+ + Sbjct: 155 AWFETRADLILAAAEASTTRYKKGSPLGLLDGVPTAVKDEYDIDGYKT--CLGSLNDYTS 212 Query: 101 ---PHYESTVT---QKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 P +S + +KL + GA++LGKL+M EF + +S YG ++P+ K+ Sbjct: 213 DPAPPGDSIASWCVRKLEEAGAIVLGKLSMHEFGLDTSGSNPNYGTPLNPYNP-----KY 267 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 PGGSS GS+ AV+ L ++G+D GGSIR P+SF G+KPT+ R S + + + Sbjct: 268 YPGGSSSGSAYAVSAGLVPFALGSDGGGSIRIPSSFCSVYGLKPTHNRISHHPGPNHSNT 327 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL 274 G + ++ + L + I C + A +G+P+ + Sbjct: 328 CAVNGPLAADLQSLSALYRIIG----CPPSSSPFNPVSPRLAPCHPSGKKYLGVPEAW-F 382 Query: 275 DYLSPTIDKTWQQGISWLKDAGA-KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 +P I + I+ L D IV I +P A+ + +A++ Sbjct: 383 SQATPAIQHLCRSAITTLADKNDYTIVPIQIPFLVEGQIAHALTILTDAAT--------- 433 Query: 334 YGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 + +T ++ ++I++G L + YL A+K+R L+ + Sbjct: 434 ------------LLPDTSNL----TAPNKILLG---LGRVTPATDYLLAQKLRRLLMQHL 474 Query: 394 TEAFEQ--GVDVILTPTTPTSAFPLGKEEN-----NSGSMGHIYNDVFTVAVNMAGLPAI 446 + +++ G+ +I+TPTT + +P+ ++ + G D +A N GLPAI Sbjct: 475 SWLWKEYPGM-IIVTPTTSCAGWPIRDQKELKYGISDGDQTLKTMDFIWLA-NFTGLPAI 532 Query: 447 SVPAALC----------------EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR-- 488 SVPA E K+P+GL G+ E+ L G +E G R Sbjct: 533 SVPAGFVVPEGAKGEGEIAEENTEGKIPIGLMGTGEWGSEDFLMRWGLDVENVVGDRRSK 592 Query: 489 PHKW 492 P W Sbjct: 593 PPIW 596 >gi|187920431|ref|YP_001889463.1| amidase [Burkholderia phytofirmans PsJN] gi|187718869|gb|ACD20092.1| Amidase [Burkholderia phytofirmans PsJN] Length = 506 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 17/278 (6%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L+ + V + ++ +A +L + IE N + NA I + A ++R Sbjct: 10 DLDALTVEAVQAGFKAGTFTAEQLARACFDRIERDNGKYNAVIFLNPAAVDDARRIDERR 69 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDG------FRPHYESTVTQKLWDNGA 116 L G+P+ IKD G T A L P ++ V ++ GA Sbjct: 70 AAGEPLGPLAGVPVVIKDPMDMVGFPTTAGWAKLYSKKGGVDLMPERDAPVVARMRRAGA 129 Query: 117 VMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 ++LGK N+ + GS S+ GP I+ + D+ PGGSS G+++AVA + Sbjct: 130 ILLGKTNVPILSHTGSHANDSWAGPTIN----VVMPDR-VPGGSSAGTASAVASCMAVLG 184 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 + +TGGSI+ PAS VGIKPT G G++ + + D G I R VRD+A+ L + Sbjct: 185 LAEETGGSIQNPASAQNLVGIKPTIGLVPNAGVVPLSGNRDVVGPIARNVRDAALCLDVL 244 Query: 236 AGYDECD----ATCVNLPVPDYERALD-QSIQGMTVGI 268 AGY D A+ P Y ALD +++G +G+ Sbjct: 245 AGYSSEDPKTLASVGRQPEGGYTAALDPNALRGKRIGL 282 >gi|110736857|dbj|BAF00386.1| putative amidase [Arabidopsis thaliana] Length = 652 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 19/270 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + ++++ I++ ELV Y++ ++ N + A + + A A+E+D Sbjct: 199 DIAFMSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDL 258 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S E+ V ++L +GAV++ K Sbjct: 259 LSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAK 318 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ S G++T Sbjct: 319 LVTGSMAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAAST--------SAGSETA 363 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+ PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D Sbjct: 364 GSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPD 423 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE 271 D + + +E I +TVG K+ Sbjct: 424 DLSSREIA---FEDPFSVDITKLTVGYTKD 450 >gi|328790282|ref|XP_001122981.2| PREDICTED: fatty-acid amide hydrolase 2-like [Apis mellifera] Length = 510 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 115/510 (22%), Positives = 206/510 (40%), Gaps = 60/510 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L M+ SE +++R+K IS++E+V ++I+ + N +NA +E A A+E DK Sbjct: 37 NNLILMSASELAEKIRTKKISSLEVVTAFIERAKEVNEIINAVVEDRYSDALEEAKEIDK 96 Query: 62 RIINGDARDL-------EGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWD 113 + + DL G+P K+ KG +HT FR ++T + + Sbjct: 97 LLQTLENTDLIKEKKPFLGVPFTTKESNEAKGMLHTMGLIS-RRNFRSQEDATAIHLIKN 155 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 G +++ K N+ E + + + + YG +P+ D+T GGSSGG +A A A Sbjct: 156 VGGILIAKTNIPELNLWTESRNNLYGQTCNPY---DTTRNV--GGSSGGEAAITAACGTA 210 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGI----ISFAPSLDQAGIITRTVRDSA 229 S+ +D GGSIR PA F G G KPT G GI + S+ + G I + D Sbjct: 211 FSVASDIGGSIRMPAFFNGVFGFKPTAGLTPLKGIGLRQEDYPNSMAEVGPICKKAEDLI 270 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 LLK + + + +NL L+ Q + I R ++ + + + Sbjct: 271 PLLKVLI---QDKISLLNLNAEVDITQLNIFYQENSGDI----RASKINYEMRTALLKVV 323 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 K+ + +I +P ++Y+ Y R+ + E D N Sbjct: 324 QHFKEVNGSVTKIKIPGSEYS------------------YRLWRFWMTQENMDFKLNITN 365 Query: 350 TRSIGFGQEVKHRIMIG----TYVLSSRCYDSHYLRAR------KIRTLIKRDFTEAFEQ 399 + +++ G T+ + D A + T +K E Sbjct: 366 RKYRTSAFTEISKLLTGKCELTFAAILKLIDEDLFPAEDPKWAMNVTTNMKNYLMNKLEH 425 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 ++ P++P SA + + YN + N+ P VP + + +P+ Sbjct: 426 N-GILFYPSSPYSA------GYHYTAFLRPYNFGYWCLFNVLKFPVCQVPLGIDKNGLPI 478 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 G+ I P+ + +V + ++K G + P Sbjct: 479 GVXXIAAPYNDHLCLAVARELDKVFGCWVP 508 >gi|241948777|ref|XP_002417111.1| urea amidolyase (including urea carboxylase and allophanate hydrolase), putative [Candida dubliniensis CD36] gi|223640449|emb|CAX44701.1| urea amidolyase (including urea carboxylase and allophanate hydrolase), putative [Candida dubliniensis CD36] Length = 1813 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 119/456 (26%), Positives = 198/456 (43%), Gaps = 45/456 (9%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 +L+ S A E+ A IE + + + +S+KR + L G+P+ +KD Sbjct: 29 QLLKSQKSAPEDPAWISLASIENLEHQWKFLQSKSNKRDL-----PLYGVPVAVKDNIDA 83 Query: 85 KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 K T A + P ++T + L D GA+++GK N+D+FA G S YG I+P Sbjct: 84 KTFETTAACPSF-AYSPSKDATTVRLLRDAGAIVIGKTNLDQFATGLVGTRSPYG--ITP 140 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 K+ GGSS GS++ VA + ++GTDT GS R PA+ +G+KPT G S Sbjct: 141 ---NTFNPKYVSGGSSAGSASVVARGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGVFS 197 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 G++ SLD I ++D+ + +A DE D ++P E L + + Sbjct: 198 CSGVVPACKSLDCVSIFALNLQDAQLTFSIMAQEDEHDEFSRSMP----ENPLLKFGKTP 253 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 + +P L Y K +++ ++ + G ++V + + E Sbjct: 254 KIVVPTNL-LWYGEQENPKLYKEAVAKFERIGCELVSLDI----------------EPLL 296 Query: 325 NLAR--YDGVRYGLR-VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR 381 LAR Y+G R V KD N V I G + ++ C+ Y R Sbjct: 297 ELARCLYEGPWVAERYVAVKDFFAT--NPPEKDLDPTVTKIIKGGEHYSAATCFQYEYKR 354 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA 441 + ++KR +G+D I+ PT P + P +E N + +T VN+A Sbjct: 355 ----QGIVKR--VNKLLEGIDAIIVPTAPLN--PTIEEVTNEPIKVNSCQGTYTNFVNLA 406 Query: 442 GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + A+++PA +P G+ L+ F + L + Sbjct: 407 DMSALAIPAGFRNDGLPFGVTLLSHKFNDYALLDLA 442 >gi|227533706|ref|ZP_03963755.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188690|gb|EEI68757.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 488 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 121/514 (23%), Positives = 212/514 (41%), Gaps = 98/514 (19%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+ +S EL+DS + + N +NA R A + D + + G+P Sbjct: 13 IRAGVLSPAELIDSTREKMTALNPALNAITWT-----RFEAAKQDANQLEDHGQPFFGMP 67 Query: 76 I---GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + G+ FA G S + + + + L G +++G+ N+ EF + Sbjct: 68 LILKGLGQDFA--GAPATFGSRFFAKAKSEHTNNFVKALQRLGFIIVGQSNVPEFGFKNI 125 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + YGP +PW ++PGGSSGG++A VA + + G+D GGSIR PASF+G Sbjct: 126 TDAELYGPARNPWN-----HDYSPGGSSGGAAAVVASGISPLATGSDGGGSIRIPASFSG 180 Query: 193 TVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT GR + I+FA +T+T+ D+A LL+ +A Sbjct: 181 LIGLKPTRGRVPTGPGEWRGWQGASINFA--------LTKTMADTAALLRGLA------- 225 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKD 294 L P L + VG + ++ Y +S T K + L+ Sbjct: 226 -TTQLAAPFIAPPLRLDL----VGDARPLKIAYTTTSPVGTPVSDTAVKAVETAADALRA 280 Query: 295 AGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 AG ++V + AL AYY+++ E ++ + + + G + D+ + Sbjct: 281 AGHQVVAAAPDVDGTALMKAYYMMNGGE-TAAMFQAFAAQTGKQATAADMELITWVIYQA 339 Query: 354 GF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G + + +G + ++ Y SH F + D++L+PTT + Sbjct: 340 GLHTSAADYSLSLGAWDRAAEAY-SH------------------FHESYDLLLSPTTAKT 380 Query: 413 AFPLGKEENNSGSMGHIYN--------------DVF---------TVAVNMAGLPAISVP 449 A + + + + + D+F T N+ G PAIS+P Sbjct: 381 APRIDAVLQSPAIVAKMQHAAELAPQEQQELIWDLFEPSLEYSPFTQQANLTGAPAISLP 440 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A+ + +PLG+Q RE+ L +G E++ Sbjct: 441 TAISPEGLPLGIQFTAAKGREDQLLRIGYWFEQQ 474 >gi|241764756|ref|ZP_04762765.1| Amidase [Acidovorax delafieldii 2AN] gi|241365746|gb|EER60418.1| Amidase [Acidovorax delafieldii 2AN] Length = 448 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 109/422 (25%), Positives = 185/422 (43%), Gaps = 49/422 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ + +KD F G T A S +L G P + +L G +++G+ NM EFA Sbjct: 61 LAGLAVSVKDLFDIAGQPTTAGSTVLAGAAPAQQDCPAVARLRAAGGMVIGRTNMVEFAF 120 Query: 130 GSSNETSYYGPVISPWR----SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 ++G + W ++ + PGGSS G++ +VA +G+DTGGSIR Sbjct: 121 SGVGVNPHFG-TPAAWDGRFGALPGAPRI-PGGSSSGAAVSVATGAAFVGLGSDTGGSIR 178 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+ G VG K T G I + +LD A +TR+VRD+ ++ + +A Sbjct: 179 IPAALNGIVGFKNTARLVPTAGAIPLSTTLDTACAMTRSVRDAVVVHEVLAARR-----V 233 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P P ++ + +P LD L T+ + + + + L+ AGA I EI+LP Sbjct: 234 TRSPAP---------LRFWRLAVPSTTFLDNLDATVAQAFSRTLDALRRAGAHIEEIALP 284 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 T+ + P +A L+ + + + + + + V+ RI Sbjct: 285 LTEE-------LGPMQARGGLSAAESHAWHRPLLARQASQ---------YDPRVRSRIER 328 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 G + ++ D L+AR+ I R EA D +L+PT P A + + S Sbjct: 329 GATMAAADYID--LLQARQ--HWIAR--MEAALAPYDALLSPTVPMVAPTIAEVAPGSER 382 Query: 426 MGHIY--NDVF---TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + N + T VNM A+S+P + ++P+GL + ++ + +V I Sbjct: 383 DAEFFRVNALLLRNTSVVNMLDGCALSLPCHVA-GELPVGLMVWHGAMHDDAVLNVSLQI 441 Query: 481 EK 482 E+ Sbjct: 442 ER 443 >gi|229011252|ref|ZP_04168445.1| Amidase [Bacillus mycoides DSM 2048] gi|228750135|gb|EEL99967.1| Amidase [Bacillus mycoides DSM 2048] Length = 536 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 124/244 (50%), Gaps = 14/244 (5%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + S +NA E+ A AA + DK Sbjct: 73 VDELQKMVDDGKLSYEELTSIYLFRIQEHDQSGISLNAVTEINPD-AMEAARKLDKERAL 131 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 +L GIP+ +KD T+ + T A +++L + ++T+ +KL + GA +LGK NM Sbjct: 132 KKKSNLYGIPVIVKDNIQTEKVMPTSAGTYVLKDWIADEDATIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PAS VG++P+ G SR GII A +LD AG + RTV+D+A L + YD Sbjct: 248 TTGSIVAPASQQSVVGLRPSLGMISRTGIIPLAETLDTAGPMARTVKDAATLFNTMVSYD 307 Query: 240 ECDA 243 E DA Sbjct: 308 EKDA 311 Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 I ND ++ +AG P ++VPA P+G+ +G+ F E+ LF++G E+++ R Sbjct: 474 INNDEVLLSA-VAGYPELAVPAGYDSDGQPVGVVFVGKQFGEKELFNIGYAYEQQSKNRR 532 Query: 489 PHK 491 K Sbjct: 533 SPK 535 >gi|222635368|gb|EEE65500.1| hypothetical protein OsJ_20931 [Oryza sativa Japonica Group] Length = 480 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 197/456 (43%), Gaps = 90/456 (19%) Query: 78 IKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGS 131 I+D AT+ ++T A S L G ++ V ++L GAV+LGK N+DE+A G+ Sbjct: 71 IEDNIATRDRLNTTAGSLALLGSVARRDAGVVRRLRRAGAVVLGKANLDEWANFRTIQGT 130 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++ G +P+ GSS GS+ A A + AA++GT+T GSI P+S Sbjct: 131 GGWSARGGQGRNPY-----VLSAAQCGSSTGSAIAAAANMAAATLGTETDGSILCPSSLN 185 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 VGIKPT G SR G++ +P D G I RTV D+ +L AI YD DA Sbjct: 186 SVVGIKPTVGLTSRAGVVPISPRQDTIGPICRTVADAVQVLDAIVSYDSRDAKATRAASK 245 Query: 248 -LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVE--- 301 +P Y + L ++G +GIP + ++ S T+ + +QQ + ++ GA ++E Sbjct: 246 YIPPGGYVQFLKPDGLKGKRIGIPNGF-FNFPSGTVQQIVYQQLLDTVRKQGAVVIENLD 304 Query: 302 -ISLPHTQYAL-PAYYIISPAEASSNLARY---------------------DGVRYGLRV 338 +L Q L I+ PAE S+L Y + L+ Sbjct: 305 IANLTVIQDVLNNGQQIVLPAEFKSSLNTYLSDLSYSPVRSLAEIIAFNDAHPIEERLKD 364 Query: 339 EGKDILEMYENTRSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 G+ I + ENT IG + + H++ + L A + L+K Sbjct: 365 FGQLIFLVAENTTGIGALERAIIHQL--------------NKLSADGLEKLMK------- 403 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 ++ +D I+TP ND + + + G+PAI+VPA ++ + Sbjct: 404 DEQLDAIITP-----------------------NDSVSTVLAIGGMPAITVPAGYGKRGV 440 Query: 458 PLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKWW 493 P G+ G E L + E+ + K+ Sbjct: 441 PFGICFGGLKGYEPRLIEMAYAFEQATKVRKAPKFL 476 >gi|209544873|ref|YP_002277102.1| amidase [Gluconacetobacter diazotrophicus PAl 5] gi|209532550|gb|ACI52487.1| Amidase [Gluconacetobacter diazotrophicus PAl 5] Length = 533 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 131/436 (30%), Positives = 197/436 (45%), Gaps = 49/436 (11%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +KD T+ + T A S L G H ++ V L GA++LGK N+ E+A Sbjct: 109 LYGLPIVVKDNIETRDDLPTTAGSLALAGNVSHRDAPVIALLRAAGAIVLGKANLSEWAN 168 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S S + T GSS GS+ AVA L A+IGT+T GSI PAS Sbjct: 169 FRSAHASSGWSAVGGLTHNPHDRARTACGSSAGSAVAVAAGLAPAAIGTETDGSITCPAS 228 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--ATCVN 247 G VG+KPT G SR GI+ + S D AG +TRTVRD+A+LL IAG D D + Sbjct: 229 VNGIVGLKPTVGLVSRSGIVPISASQDTAGPLTRTVRDAALLLGVIAGSDPDDPATAAAD 288 Query: 248 LPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 DY L +++G +G+ + + +P + ++ ++ L+D GA +V+I Sbjct: 289 RHHADYLAGLRPDALRGRRIGVMRFAQGG--NPDVRVLFEAALARLRDGGAVLVDI---- 342 Query: 307 TQYALPAY--YIISPAEASSNLARYDGVRYGLR---------VEGKDILEMYENTRSIG- 354 PA+ I E + L+ + R GL V +D+ + R+ Sbjct: 343 -----PAFDSSAIDGPELTVLLSEF---RAGLNAYLAHTPAAVTVRDLPALIAFNRAHAD 394 Query: 355 -----FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 FGQ++ R LS Y + AR++ D A + +D ++ PT Sbjct: 395 REMPWFGQDLFERAQ-DAPALSDPAYTTARDTARRLAGAQGIDAMLAHDH-LDALVAPTI 452 Query: 410 PTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + LG + G + +AG P +SVP + +P+GL IG Sbjct: 453 GPAWMTDPVLGDRPGDGTGAGSL--------AAVAGYPHLSVPMGQV-RGLPVGLSFIGP 503 Query: 467 PFREETLFSVGQIIEK 482 + E TL ++G E+ Sbjct: 504 AWSEATLLALGYGFEQ 519 >gi|148258388|ref|YP_001242973.1| putative amidase [Bradyrhizobium sp. BTAi1] gi|146410561|gb|ABQ39067.1| putative amidase [Bradyrhizobium sp. BTAi1] Length = 491 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 127/504 (25%), Positives = 208/504 (41%), Gaps = 88/504 (17%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R++S +++A EL + I + ++ +EV A A E+ K N G+ Sbjct: 21 RVKSGELTAAELARQAAEGIAKVDPKLCGVVEVFAD----AIEDPIKAGANAQG-PFAGL 75 Query: 75 PIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +KD T G + S + G RP ++ +T K+ G ++G+ EF + SS Sbjct: 76 PFLMKDLGPTMAGRLQEQGSLFMRGNRPVADTHLTAKMRKAGLNLMGRTTTPEFGVCSSA 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E +PW + +T GSS GS+A VA + + TD GGSIR PA G Sbjct: 136 ENPAVYVTRNPWNT-----DYTTCGSSAGSAAMVAAGVVPIAHATDGGGSIRIPAGVNGN 190 Query: 194 VGIKPTYGRCSRLGIISFAPSL-DQAGII------TRTVRDSAILLKAIAGYDECDATCV 246 +G+K SR G+ S AP L D G++ +R+VRD+A + D C Sbjct: 191 IGLK-----VSR-GVFSIAPHLSDLTGLVSIQGCQSRSVRDTAAFV------DHCRGGAP 238 Query: 247 NLPVP------DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 +P Y + + + + + ++ +P I ++ +L+ G Sbjct: 239 GEFMPYWTTPEPYVELIKRDPGKLRIALSHQWGDYRATPHIAAELERVGKFLEGLGH--- 295 Query: 301 EISLPHTQYALP--AYYIISPAEASSNLARYDGVRYGLRVEGK------DILE-----MY 347 H YALP Y A+ + ++ + V L + K D++E ++ Sbjct: 296 -----HVGYALPDVDYRAAFAAQTTCYISNFAIVISNLLAQRKLERPPADLIEPINIRIW 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 E RS F + + + T +SR + AF + D+ILTP Sbjct: 351 EAGRSTSFAERAAMQAVFNT---TSRAFG-------------------AFFEDWDIILTP 388 Query: 408 TTPTSAFPLGKEE-----NNSGSMGHI----YNDVFTVAVNMAGLPAISVPAALCEKKMP 458 T +G E +N + N FT N+ G+PA+S+P A E +P Sbjct: 389 ITALPTPKIGTTEYLTISDNPDVLDWFENLWRNFAFTPLANLCGIPALSLPLATNEHGLP 448 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 LG+Q IG+ + L + IE+ Sbjct: 449 LGIQAIGKQADDGLLLQLAAQIER 472 >gi|88860089|ref|ZP_01134728.1| amidase [Pseudoalteromonas tunicata D2] gi|88818083|gb|EAR27899.1| amidase [Pseudoalteromonas tunicata D2] Length = 520 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 136/503 (27%), Positives = 220/503 (43%), Gaps = 44/503 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ---MNAYIEVVAQKARAAAEE 58 ++ N ++S+ + S E+ Y+ AI +N Q +NA I + A ++ Sbjct: 27 ADFNEKSISQLHALVEGNQASYQEINQFYLDAIAKNNKQGFNLNAVISINPHTLEQAKQK 86 Query: 59 SDKRIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 R L G+PI +KD T G+ T A + L ++ + +KL GA+ Sbjct: 87 DLLRNQGQVVGPLFGMPIIVKDNINTLDGMATTAGALALANNYSQNDAFLVEKLKQAGAI 146 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK N+ E+A S+ +S + TP GSS GS+ AVA A+IG Sbjct: 147 IIGKANLSEWANFRSSISSSGWSDVGGQAKNPYVLNRTPCGSSSGSAVAVAANFAVAAIG 206 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GSI PAS T VGIKP+ G SR G++ + S D G +TRTV D+A+LL +A Sbjct: 207 TETDGSITCPASHTSLVGIKPSVGLISRSGVVPLSASQDSPGPMTRTVADAALLLTVLAQ 266 Query: 238 YDECDATCVNLP-VPDYERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D +AT P DY + L Q ++G +GI + + + + Q +S LK Sbjct: 267 PDPKEATFATHPGYIDYRQFLKQDGLKGKRIGIAR--NISDFNAVSTAAFNQALSVLKAQ 324 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNL--ARYDGVRYGLRVEGKDILEMYENTRSI 353 GA I++ LP +S AE L ++D +Y + + ++ E Sbjct: 325 GAIIID------NLELPDQEALSQAEFDVLLYDFKHDLNQYLAQTPKEVSVKTLEQLIQF 378 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI----KRDFTEAFEQG--VDVILTP 407 R +++ D ++ +TLI +++ +A Q +D I P Sbjct: 379 NQSNTDLTRFNQALLTMANEKTDLTSPNYQQAQTLIELKGRKNGIDALMQAHQLDAIAAP 438 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN----MAGLPAISVPAALCEKKMPLGLQL 463 T + + I D F A + +AG P ++VP + ++PLG+ Sbjct: 439 TNSPAWV-----------IDTINGDHFAGASSAPSAIAGYPLVTVPMS-YHHELPLGISF 486 Query: 464 IGQPFREETLFSVGQIIEKEAGY 486 G T S G++IE G+ Sbjct: 487 FG------TRLSEGKLIEIAYGF 503 >gi|319780639|ref|YP_004140115.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166527|gb|ADV10065.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 480 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 130/489 (26%), Positives = 209/489 (42%), Gaps = 65/489 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ D++ ELV++ I +E N +NA I + AR A+ D + G+P Sbjct: 24 VKRGDVTPAELVEAAITLVERLNPTLNAVIHRLYDMARGQAQTVDT------SAPFAGVP 77 Query: 76 IGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +K+ ++ G S L +++ V +++ G V++GK N E + E Sbjct: 78 FLLKELASSWTGAPNTNSSFYLKDVVADFDTEVVRRMKAAGLVLVGKSNAPENGWSITTE 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 YG +PW+ + TPGGSSGG++AA+A + + +D GSIR PAS G V Sbjct: 138 PKLYGATKNPWK-----EGITPGGSSGGAAAAIASRMVPIAEASDGAGSIRIPASCCGIV 192 Query: 195 GIKPTYGRCSRLGIISFAPSLD--QAG----IITRTVRDSAILLKAIAGYDECDATCVNL 248 G+KP+ GR +S AP D G +RTVRD+A L A+AG D Sbjct: 193 GLKPSRGR------VSLAPFGDYWYGGAYFLCCSRTVRDTAAYLDAVAGALPGDP--YTP 244 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDAGAKI 299 PVP D S ++ PK+ R+ + + P + + + L+ G + Sbjct: 245 PVP------DGSWLSLSARAPKKLRIGFSVTPPNGTAIDPEVKAAVLETVGTLERLGHHV 298 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E +P A+ Y ++ Y G V D+ ++ F Sbjct: 299 EEHDMPLDADAVWKTYTNMTCVQTAATFDYLETVMGRSVTPGDV-------EAVTFAIIE 351 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R GT +S D LR + RD D+ +TPT PLG Sbjct: 352 RGRATSGTRHIS----DVEQLRQ------VGRDIVGDL-GAYDLFITPTLTQLPRPLGYY 400 Query: 420 ENNSGSMGHIYN-----DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + + + YN VF N++G PAIS+P + +P+G+QL+G+ E T+ Sbjct: 401 DMSETDIDR-YNAKWADSVFAFPFNISGQPAISLPLGWSKDGVPIGVQLVGRYGDEATVL 459 Query: 475 SVGQIIEKE 483 + +E+E Sbjct: 460 AASAQLEQE 468 >gi|145334317|ref|NP_001078540.1| amidase family protein [Arabidopsis thaliana] gi|332003760|gb|AED91143.1| Amidase family protein [Arabidopsis thaliana] Length = 652 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 19/270 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM+V E + ++++ I++ ELV Y++ ++ N + A + + A A+E+D Sbjct: 199 DIAFMSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDL 258 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A G T S E+ V ++L +GAV++ K Sbjct: 259 LSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAK 318 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ S G++T Sbjct: 319 LVTGSMAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAAST--------SAGSETA 363 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS+ PA+ G ++PT+G R G++S + SLD+ G RT D A++L AI G D Sbjct: 364 GSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPD 423 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKE 271 D + + +E I +TVG K+ Sbjct: 424 DLSSREIA---FEDPFSVDITKLTVGYTKD 450 >gi|218186498|gb|EEC68925.1| hypothetical protein OsI_37616 [Oryza sativa Indica Group] Length = 571 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 124/453 (27%), Positives = 207/453 (45%), Gaps = 53/453 (11%) Query: 18 SKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKARAAAEESDKRIINGDARD-LEG 73 S +++ V++ ++ A++ + M +I + AEES R G ++G Sbjct: 142 SGEVTPVQVAKRFLAAVKECSGPGLNMAFFISYSPEDIIRQAEESTLRYQRGTPLSAMDG 201 Query: 74 IPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 I + +KD T + L ++ V +L GAV+ GK NM E G+S Sbjct: 202 ILVAVKDEIDCLPYPTTGGTRWLGRARACAADAAVVAQLRACGAVLAGKTNMHELGAGTS 261 Query: 133 NETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 ++G +P PG GSS GS+AAV LC ++G D GGS+R PA Sbjct: 262 GINPHHGSTRNP---------HNPGRVSGGSSSGSAAAVCAGLCPVALGVDGGGSVRMPA 312 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG KPT GR S G++ ++ GI+ TV D+A+ AI + L Sbjct: 313 ALCGVVGFKPTAGRLSNAGVLPLNWTVGMPGILAGTVEDAAVAYSAIVDQSQPSYLRPEL 372 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAKIVEISLPHT 307 +P + +L SI+ + + ++ D S I + + L G + +++++P Sbjct: 373 NLPLLKSSL--SIKNIKLAKYAKWFNDS-SEDIRSCCDKSLQMLHAHYGWETLDVTIPEI 429 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + A+Y+ +E +++LA+Y D L+ E G +V R+ +G Sbjct: 430 EEMRLAHYVTIGSECTASLAKY-----------LDKLKRSE------IGWDV--RVALGV 470 Query: 368 Y-VLSSRCY-DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 Y SSR Y +S LR R++ F + + DVI++P T +A+ L + SG Sbjct: 471 YGSFSSRAYLNSQRLRNRQMY------FHKEIFKTADVIVSPMTGVTAYKLQDDALKSGE 524 Query: 426 MGHIYNDV---FTVAVNMAGLPAISVPAALCEK 455 + +I +++A N GLPAI+V A C+K Sbjct: 525 LDYINGAALVRYSIAGNFLGLPAITVMEA-CKK 556 >gi|206581101|ref|YP_002238458.1| allophanate hydrolase [Klebsiella pneumoniae 342] gi|206570159|gb|ACI11935.1| allophanate hydrolase [Klebsiella pneumoniae 342] Length = 598 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 120/481 (24%), Positives = 207/481 (43%), Gaps = 63/481 (13%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA---AAEESDKRIINGDARDLEG 73 R+ + + L+ + Q E N + N +I ++++ +A AA E + + L G Sbjct: 18 RNGNTTPRALLAAIRQRAETLNPEFNLFIHLLSEAEQAPFLAALEGH----SPETLPLYG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD I T A +RP +T+ +L GAV +GK N+D+FA G + Sbjct: 74 VPFAIKDNIDLAEIVTTAACPAF-AYRPTQSATIVAQLIALGAVPVGKTNLDQFATGLNG 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTP-GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 S YG R ++ P GGSS GS+ AVA + + ++GTDT GS R PA Sbjct: 133 TRSPYG------RCRNAYHPAYPSGGSSAGSALAVALGVASFALGTDTAGSGRVPAGLNN 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+K T G S G++ +LD + T +++ LL +A D D+ P + Sbjct: 187 LVGLKATKGVISTAGVVPACRTLDCVTFFSATADEASQLLALVARTDPQDSYSRRNPQWN 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIVEISLPHTQYAL 311 +A + G G+P+ L++L + + Q + L G V I Sbjct: 247 SRQAFGRPSAGFRFGVPQT--LNFLGCRASEALFAQAVQRLTALGGVPVAIDF------- 297 Query: 312 PAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P A++ L YDG R V G I + + + ++ + + Sbjct: 298 ------APFLAAARL-LYDGPWVAERYAVAGPLIEQQPDAVLPV-----IRDVLAKAPAI 345 Query: 370 LSSRCYDSHY-LRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLGKEEN 421 ++ + + Y L+ K + +A +D +LTPT P +A P+ + + Sbjct: 346 DATATFKAMYQLQGYKAQ-------CDAILDTLDCVLTPTFPRPVTLDELAAEPIARNAD 398 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G+ +T +N+ A+SVP +P G+ L G+ F ++ L S+ + Sbjct: 399 ----LGY-----YTNFMNLLDYAAVSVPCGFMPDGLPSGVTLFGRAFTDQYLLSLADAFQ 449 Query: 482 K 482 + Sbjct: 450 R 450 >gi|187478986|ref|YP_787010.1| amidase [Bordetella avium 197N] gi|115423572|emb|CAJ50108.1| putative indoleacetamide hydrolase [Bordetella avium 197N] Length = 463 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 134/502 (26%), Positives = 214/502 (42%), Gaps = 63/502 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++E+ ++ E D +R + SA+E S ++ +E N +NA ++ + AAA + D Sbjct: 1 VTEIWRLSAGEVADGVRRGEFSALEAAQSALKRLEMVNPTLNAVVDFDPEAVLAAARQCD 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R GDA L G+P+ +K +G T + S V L GAV+L Sbjct: 61 ARRARGDALGLLGGVPVTVKINVDQQGFATSNGVRLQRDLIAQRNSPVVDNLLRAGAVIL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ N F++ + YG +P TPGGSSGG+++AVA + + GTD Sbjct: 121 GRTNTPAFSLRWFTDNQLYGATRNP-----RNVALTPGGSSGGAASAVAAGIGHLAHGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI----------ITRTVRDSA 229 GSIR PA G G++P+ GR + +F +L + G+ + R + D Sbjct: 176 IAGSIRYPAYACGVHGLRPSLGR-----VPAFNAALPERGLGGQITAVSGPLARRIADVR 230 Query: 230 ILLKAIAGYDECDATCVNLPV--PDYER--ALDQSIQGMTVGIPKEYRLDYLSPTIDKTW 285 + L A+A D D V P+ P YER AL G+ + P ++ Sbjct: 231 LGLLALAAPDSRDPWYVPAPLEGPGYERKAALWLRPDGLDI-----------VPAVEDAL 279 Query: 286 QQGISWLKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 +Q + L+DAG ++ EI P + A A+ + DG L + Sbjct: 280 RQAAARLRDAGWQVDEIEQGPPMREA---------AQLQLRMWLADGYEAMLAAAER--- 327 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 E E GQ R L Y + R R + RD+ + F ++ Sbjct: 328 EEDEGALIALRGQGEAFR------GLDLSTYQATLTR----RATLVRDW-QCFFDTYPLM 376 Query: 405 LTPTTPTSAFPLGKEENNSGSMGHIYNDVFT-VAVNMAGLPAISVPAALCEKKMPLGLQL 463 LTP + F G ++ + ++ T + + GLP ++V K P+G+QL Sbjct: 377 LTPVSAELPFADGLDKQGEAAYRRVWEAQMTQIGLPFMGLPGLAVATGEV-KGAPVGVQL 435 Query: 464 IGQPFREETLFSVGQIIEKEAG 485 + +RE+ L GQ+IE EAG Sbjct: 436 LAARYREDILLDAGQLIE-EAG 456 >gi|239630139|ref|ZP_04673170.1| amidase family enzyme [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067289|ref|YP_003789312.1| amidase family enzyme [Lactobacillus casei str. Zhang] gi|239527751|gb|EEQ66752.1| amidase family enzyme [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439696|gb|ADK19462.1| Amidase family enzyme [Lactobacillus casei str. Zhang] Length = 487 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 119/510 (23%), Positives = 209/510 (40%), Gaps = 90/510 (17%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R+ +S EL+DS + + N +NA R A + D + + G+P Sbjct: 12 IRAGVLSPEELIDSTREKMTALNPALNAITWT-----RFEAAKQDANQLEDHGQPFFGVP 66 Query: 76 I---GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 + G+ FA G S + + + + L G +++G+ N+ EF + Sbjct: 67 LILKGLGQDFA--GAPATFGSRFFAKAKSEHTNNFVKALQRLGFIIVGQSNVPEFGFKNI 124 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + YGP +PW ++PGGSSGG++A VA + + G+D GGSIR PASF+G Sbjct: 125 TDAELYGPARNPWNR-----DYSPGGSSGGAAAVVASGISPLATGSDGGGSIRIPASFSG 179 Query: 193 TVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT GR + I+FA +T+T+ D+A LL+ +A Sbjct: 180 LIGLKPTRGRVPTGPGEWRGWQGASINFA--------LTKTMADTAALLRGLA------- 224 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWLKDAGAK 298 L P L + G T + Y +S T K + L+ AG + Sbjct: 225 -TTQLAAPFIAPPLRLDLVGDTRPLKIAYTTTSPVGTPVSDTAVKAVETAADALRAAGHQ 283 Query: 299 IVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF-G 356 +V + AL AYY+++ E ++ + + + G + D+ + G Sbjct: 284 VVAAAPDVDGTALMKAYYMMNGGE-TAAMFQAFAAQTGKQATAADMELITWVIYQAGLHT 342 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + + +G + ++ Y+ F + D++L+PTT +A + Sbjct: 343 SAADYSLSLGAWDRAAEAYNH-------------------FHESYDLLLSPTTAKTAPRI 383 Query: 417 GKEENNSGSMGHIYN--------------DVF---------TVAVNMAGLPAISVPAALC 453 + + + + D+F T N+ G PAIS+P A+ Sbjct: 384 DAVLQSPAIVAKMQHAAELAPQEQQALIWDLFEPSLEYSPFTQQANLTGAPAISLPTAIS 443 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + +PLG+Q RE+ L +G E++ Sbjct: 444 PEGLPLGIQFTAAKGREDQLLRIGYWFEQQ 473 >gi|226954244|ref|ZP_03824708.1| amidase [Acinetobacter sp. ATCC 27244] gi|226835008|gb|EEH67391.1| amidase [Acinetobacter sp. ATCC 27244] Length = 608 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 122/468 (26%), Positives = 194/468 (41%), Gaps = 63/468 (13%) Query: 27 VDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 +D+ + + + Q NA+I E + Q+ + E + + L G+P +KD Sbjct: 25 LDTLKDLVASIDPQDNAWISIATVEQIEQQIQVLNELTKEAESLAKQFPLYGVPFAVKDN 84 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G T A L TV + L GA+++GK N+D+FA G S +G V Sbjct: 85 IDVAGFVTTAACKALTTVAAQDAETV-RLLKQAGAIVVGKTNLDQFATGLVGTRSPFGAV 143 Query: 142 ISPWRSMDSTDKFTP-----GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 T+ F P G SSG +S GF+ A +GTDT GS R PA+F VG+ Sbjct: 144 ---------TNSFKPEYVSGGSSSGSASVVARGFVPFA-LGTDTAGSGRVPAAFNNIVGL 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP--VPDYE 254 KPT GR S G++ SLD I V D+ ++ + YD D+ P VP + Sbjct: 194 KPTKGRFSNRGLLPACKSLDCISIFALIVADADLVANVLEAYDPLDSYSRKHPKNVPAHF 253 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + + IP++ + +K +QQ I L+ A+I +I + Sbjct: 254 SS------KLKFAIPEKLNF-FGDEQAEKAFQQTIQLLESLNAEITKIDFSDFE------ 300 Query: 315 YIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + ++ L Y G R +D+L+ S F V I G + Sbjct: 301 ------QLAAQL--YQGSWVAERTAAVEDLLK----ANSDAFDPTVLEIIKNGEKYSAVD 348 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGSMGHIY 430 Y++ YL K+D T +Q + D ++ PT PT ++N H+ Sbjct: 349 AYNAEYL---------KQDLTRKIQQKLADFDALIVPTAPTIYTIEQLQQNPIEYNAHL- 398 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 +T N+A L A+++PA +P G+ LI + + L G+ Sbjct: 399 -GTYTNFTNLADLSALALPAGFRADHLPFGITLIATAWHDAALVHFGK 445 >gi|238485422|ref|XP_002373949.1| fatty-acid amide hydrolase, putative [Aspergillus flavus NRRL3357] gi|220698828|gb|EED55167.1| fatty-acid amide hydrolase, putative [Aspergillus flavus NRRL3357] Length = 628 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 129/524 (24%), Positives = 223/524 (42%), Gaps = 84/524 (16%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESD 60 + +V++ + +S +++ + +V + I S A+++ AAEES Sbjct: 133 KYYSVADYHELYKSGELTPIAVVKGLLPLIRRDLSTPGKHSIAFVDSRVDLVLTAAEEST 192 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFR-------PHYESTVTQKLW 112 +R G L +G+P +KD F G T S L+ + P + ++L Sbjct: 193 RRYKEGRPLGLFDGVPAAVKDEFDLDGYRTNMGS--LNDYTLEPKSDDPSITNWCIRQLE 250 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GA+++GK++M EF + ++ +YG +P+ D +T GGSS G + AV+ L Sbjct: 251 KAGAIVVGKVSMHEFGLDTTGNNIHYGTPPNPYHP----DYYT-GGSSSGCAYAVSTGLV 305 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GTD GGS+R P+SF VG+KPT+ R S +++A + G + +R A Sbjct: 306 PIALGTDGGGSVRIPSSFCSVVGLKPTHNRLSHYPSVNYASTTSVIGPLAADIRSLAEAY 365 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISW 291 + A P P +L S +G + GIP E +P + + + + Sbjct: 366 RVFA----TPGPDTPFPAPG-PLSLTPSTRGKKILGIP-EVWFSRSTPDVQRLCRSLLDK 419 Query: 292 L-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L + IV I +P +++ A + DG + +T Sbjct: 420 LVTEKDYTIVPIDIP---------FLVEGQTAHAMTILADGA------------ALLPDT 458 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPT 408 +I +RI++ L + YL A+K+R L+ + +++ G+ +I+TPT Sbjct: 459 TNI----TAPNRILL---TLGRTTPATDYLLAQKLRRLLMQHLAALWQEFPGM-IIVTPT 510 Query: 409 TPTSAFP-LGKEENNSG---------SMGHIYNDVFTVAVNMAGLPAISVPAALC----- 453 T + +P + K E G +M +++ N G+PAISVPA Sbjct: 511 TACAGWPVVSKSELKWGLSDGDRTLKAMEYVW------LANFTGIPAISVPAGYADPEGK 564 Query: 454 ---EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF--RPHKW 492 E +P+GL G+ EE L G E+ RP W Sbjct: 565 HSTEGTVPVGLMGNGEWGSEEQLLQWGLEAEELGADLRERPPIW 608 >gi|195436230|ref|XP_002066072.1| GK22129 [Drosophila willistoni] gi|194162157|gb|EDW77058.1| GK22129 [Drosophila willistoni] Length = 525 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 127/497 (25%), Positives = 211/497 (42%), Gaps = 50/497 (10%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD------- 67 ++R + +S+VE+++S+I+ I+ N +N ++ A A E+D I +G Sbjct: 52 KIREQKLSSVEVLESFIRRIQEVNPILNCVVDERFDAALKDAAEADSLIKSGQYSLEQLA 111 Query: 68 -ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + G+PI KDC + KG+ A ++ R ++ + GA+ L N+ E Sbjct: 112 KEKPFLGVPITTKDCISVKGMLHTAGLYVRRDIRGSQDADAIALMRRAGAIPLALTNVSE 171 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + + +G R+ T++ GGSSGG + A +G+D GGSIR Sbjct: 172 VCMWWESNNTVHGRT----RNAYDTNRIV-GGSSGGEGCVQSAAASAFGLGSDIGGSIRM 226 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-----AGIITRTVRDSAILLKAIAGYDEC 241 PA F G G KP+ S +G S +Q G ++R D +LK +AG Sbjct: 227 PAFFNGIFGHKPSKLVVSNVGQFPTPFSAEQNAFLGLGPMSRFAEDLRPMLKIMAGE--- 283 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK-DAGAKIV 300 A+ ++L P L Q G +D P + + Q+ + L G+K V Sbjct: 284 KASSLHLDEPVDLTKLKFFYQESDGGAKLVSSVD---PDLSEALQKVVKHLNAKFGSKQV 340 Query: 301 E-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 E I LP + + ++ A+ G Y L DI +E + + G Sbjct: 341 ERIQLPQFKQSAAIWF------ANMRDDSGHGFAYQLGNLDHDINTYWELCKWL-VGASK 393 Query: 360 KHRIMIGTYVL-SSRCYD-----SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 I + T ++ S++C H +R R RD + V++ PT PT A Sbjct: 394 HTFIGLTTAIMDSAQCKHGSSKYQHLVRKRNDL----RDEIQRLVGNNGVLIYPTHPTVA 449 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 P E + N +T VN+ G PA +VP + + +PLG+Q+I + Sbjct: 450 -PYHNE-----PILRPINFAYTGIVNVLGFPATAVPLGIGSEGLPLGVQVIANFNEDRLC 503 Query: 474 FSVGQIIEKE-AGYFRP 489 +V + +E+ G+ RP Sbjct: 504 LAVAEELERAFGGWSRP 520 >gi|297563667|ref|YP_003682641.1| amidase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848115|gb|ADH70135.1| Amidase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 504 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 141/465 (30%), Positives = 207/465 (44%), Gaps = 61/465 (13%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 ++S VE VDS ++ IE N +NA+ V +AR AA S +R G+ L+G+P+ + Sbjct: 56 ELSPVEAVDSVLERIERDNPALNAFCLVRPDEAREAARASAERWRRGEPSGALDGVPVSV 115 Query: 79 KDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD T+G T S P E S +L ++GAV +GK E A + Sbjct: 116 KDVHLTRGWPTLKGSVTSSQEGPWDEDSPAVARLRESGAVFVGKTTTPELAWKGVTDGPL 175 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G +PW TPGGSSGGS+AAVA + S GTD GGSIR PASFTG GIK Sbjct: 176 TGVTRNPWDL-----SITPGGSSGGSAAAVAAGMAPLSTGTDGGGSIRIPASFTGVCGIK 230 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD----------ATCVN 247 PT+G F SL G + RTV D A++L+ +A D D V Sbjct: 231 PTWGLVPHYPASPFG-SLAHTGPLARTVGDMALMLEVMAQPDARDWAALAAPAPGLGDVR 289 Query: 248 LPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS--L 304 L D ER ++GM + P LD + P + ++ + GA++ E L Sbjct: 290 LRT-DAERL----VRGMRIAYSPTLGGLD-VDPEVAAAVADAVAVFEALGARVEEADPGL 343 Query: 305 PHTQYALPAYYIISPAEASSNLA--RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 P ++ + A+A+ L + D + GLR +I+E + + + R Sbjct: 344 PDSREEFHVLWYSGAAKATDRLTDRQRDLLDPGLR----EIVEEGLTYSAQDYLTAMALR 399 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 + +G + R +D++ D++LTP+ P +AF G E Sbjct: 400 MEMGARM--GRFHDAY-----------------------DLLLTPSMPIAAFEAGLESPP 434 Query: 423 SGSMGHIYNDV--FTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + G + F+ NM PA SVP +P+GLQ +G Sbjct: 435 RLA-GERWTSWAGFSYPFNMTQQPAASVPCGFTAAGLPVGLQAVG 478 >gi|302542886|ref|ZP_07295228.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces hygroscopicus ATCC 53653] gi|302460504|gb|EFL23597.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptomyces himastatinicus ATCC 53653] Length = 486 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 7/252 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +E+ + ++ + + + +SAVE++ +++ IE N ++NA + V A++A AAA +D+ Sbjct: 21 NEIYYRDATDLAELIHERRVSAVEVMRAHLDRIEAVNPRVNAVVTVAAEQALAAARAADR 80 Query: 62 RII-NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L G+P +KD G+ S + P ++T +L G + L Sbjct: 81 ALAAGGTVGALHGVPFTVKDSLDVAGMVAARGSSLFRDRVPASDATAVARLRAAGGIPLA 140 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF+ + + + G ++PW + TPGGSSGG SAA+A + +G+D Sbjct: 141 KTNLPEFSYWTETDNAITGRTLNPW-----DGERTPGGSSGGESAAIAAGMSPLGLGSDV 195 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD-QAGIITRTVRDSAILLKAIAGYD 239 S+R PA TG V +K T GR G AP G + R+VRD LK +AG D Sbjct: 196 AISVRGPAHDTGIVALKATRGRIPVTGHWPEAPRRYWHVGPMARSVRDIMAALKILAGPD 255 Query: 240 ECDATCVNLPVP 251 D + P P Sbjct: 256 GVDGYVRHAPRP 267 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 435 TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 TV N+ GLPA+S+P + +P+G+QL+ + + E TL +G +E Sbjct: 427 TVPFNLTGLPALSLPFGASGEGLPIGVQLVSRWYDEATLLRLGAALE 473 >gi|229090935|ref|ZP_04222159.1| Amidase [Bacillus cereus Rock3-42] gi|228692336|gb|EEL46071.1| Amidase [Bacillus cereus Rock3-42] Length = 536 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/268 (33%), Positives = 136/268 (50%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G+ SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGKVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|94312487|ref|YP_585697.1| amidase [Cupriavidus metallidurans CH34] gi|93356339|gb|ABF10428.1| indoleacetamide hydrolase (IAH) (Indole-3-acetamide hydrolase) [Cupriavidus metallidurans CH34] Length = 473 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 133/497 (26%), Positives = 225/497 (45%), Gaps = 44/497 (8%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + +E+ ++ +++S+VE+V S + ++ N +NA ++V+A +A AA ++D Sbjct: 3 NELWRWSAAEAASQIAKREVSSVEVVASSLARLDAVNPSINAVVDVLAYEAMQAAADADA 62 Query: 62 RIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+ L G+P+ +K G T +S V L GAV++G Sbjct: 63 ALARGELLGPLHGVPVTVKVNVDMAGRATTNGVVAFQDTVASVDSPVVANLRKAGAVIIG 122 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N F++ + +G ++PW + TPGGSSGG+SAAVA + A + G D Sbjct: 123 RTNTPAFSLRWFTDNDLHGRTLNPWNA-----SHTPGGSSGGASAAVAAGIGAIAHGNDQ 177 Query: 181 GGSIRQPASFTGTVGIKPTYGRC-----SRLGIISFAPSLDQA-GIITRTVRDSAILLKA 234 GGSIR PA G G++PT G S+L + L G + RTVRD + L A Sbjct: 178 GGSIRYPAYACGVAGLRPTQGLVPAFNPSQLRERTMGAQLSSVQGPLARTVRDLRLALTA 237 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 +A D D + V + + + +P + ++ + +Q WL+D Sbjct: 238 MAAPDSRDPWQASASVGSAHKTFPTRV-AVCATLPGFTADEAVTAAV----RQAARWLED 292 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AG I E+ P Q A + ++ E ++ L DI+E + Sbjct: 293 AGCVIEEVVPPRFQEATDLWLALTMNELAAGLG--------------DIIERDGDD---- 334 Query: 355 FGQEVKHRIMIGTYVLSSRCYD-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 R IGT + D + Y+ A RT + R++ + FE+ ++L P + Sbjct: 335 -----AVRAAIGTQRRQTASLDLAGYMNALARRTTLLREWQQFFER-YPLLLMPVSWQRP 388 Query: 414 FPLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 F + + + + HI + +A + GLP +SVP L +P+G+QL+ F+E Sbjct: 389 FLIDADRQGADAARHILDAQSPLLATAILGLPGLSVPTGLA-GGLPMGVQLVAGRFQESL 447 Query: 473 LFSVGQIIEKEAGYFRP 489 + S G+ IE G P Sbjct: 448 ILSAGEAIEARCGVMTP 464 >gi|115399428|ref|XP_001215303.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192186|gb|EAU33886.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 602 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 138/547 (25%), Positives = 210/547 (38%), Gaps = 102/547 (18%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN----------------SQMNAYIE 46 +L +V + + R+ + +++V+L+D Y+ I + +++ I Sbjct: 61 KLEEASVDDLQQRMSNGSLTSVQLLDCYLDRIYQTQPYLKCDPPSPNYSICTDHVSSAIL 120 Query: 47 VVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYE 104 + A A A DK G R L GIP +KD ATK + T A L G + Sbjct: 121 QLNPDAHAIAHRLDKERAKGHIRGPLHGIPFIVKDNIATKDRMETTAGCWALIGSVVPRD 180 Query: 105 STVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGS 163 S V + GA++LGK + E+A M S+N + + RS + PGGSS G Sbjct: 181 SFVVHGMRKAGALLLGKAALSEWADMRSNNYSEGFSARGGQCRSAYNF-TVNPGGSSTGP 239 Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 AV L ++GT+T GS+ PA VGIKPT G SR G+I + D G + Sbjct: 240 GVAVGANLVPIALGTETDGSVINPAQRNAIVGIKPTVGLTSRAGVIPESLHQDTVGTFGK 299 Query: 224 TVRDSAILLKAIAGYDECDATCVN----LPVPDYERALDQ--SIQGMTVGIPKEYRLDYL 277 TVRD+ L AI G D D + P Y + L +++G G+P E Sbjct: 300 TVRDAVYSLDAIYGVDPRDNYTLAQKGLTPKGGYTQFLTNKDALKGAVFGLPWESFWALG 359 Query: 278 SPTIDKTWQQGISWLKDAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLA 327 P ++ + ++ AGA I+ LPH + I+SP + +N + Sbjct: 360 DPAQVAQLEELLDLIESAGATIINGTELPHYK------DIVSPDGWNWDYGSSRGYANES 413 Query: 328 RYDGVRYGLRVEGKDILEMYENTR--------------------------SIGFGQE--- 358 Y ++ +D L NT + G GQ+ Sbjct: 414 EYSYIKVDFYNNLRDYLSEVNNTNIKSLEDLVQYNKDNYGSEGGFPGIHPAFGSGQDGFI 473 Query: 359 ---VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 IM TY S+ Y R I +K + +D +L P + Sbjct: 474 ASLESKGIMDDTY-FSALAYCQRTTREEGIDAALKHG-----NRTLDGLLVPPAVAQSIQ 527 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK-MPLGLQLIGQPFREETLF 474 + + AG P I++PA E+ MP GL ++ F E TL Sbjct: 528 IAAQ---------------------AGYPVITLPAGTDEESGMPYGLAIMNTAFSEPTLI 566 Query: 475 SVGQIIE 481 IE Sbjct: 567 KYASAIE 573 >gi|126738701|ref|ZP_01754406.1| amidase family protein [Roseobacter sp. SK209-2-6] gi|126720500|gb|EBA17206.1| amidase family protein [Roseobacter sp. SK209-2-6] Length = 437 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 124/468 (26%), Positives = 205/468 (43%), Gaps = 54/468 (11%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +I V L Y+ AIE + Y V A++A AAA + +R G R L+G+PI Sbjct: 14 EIDPVALTQCYLDAIEAHPHRDRIYSAVTAERALAAAGAAAERARLGLRRSALDGVPISW 73 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD F + G T++ S +L G P ++ V + GAV LGK +M E A + Sbjct: 74 KDLFDSAGTATESGSDLLKGRIPDRDAQVLETATALGAVCLGKTHMSELA--------FS 125 Query: 139 GPVISPWRSMDS--TDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVG 195 G ++P ++ D+ G S + A F L A IG+DTGGS+R P+++ VG Sbjct: 126 GLGLNPVKATPPCVNDEGAAPGGSSSGAGASVAFGLAACGIGSDTGGSVRIPSAWNDLVG 185 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +K T GR S G++ D G + R+V D+ + L + G D + P P Sbjct: 186 LKTTSGRISLEGVVPLCLKFDTVGPLCRSVEDAGLALGLLEGNAGPD---LRNPAP---- 238 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 ++G + + L P + + + + + L+ AGA++V + +P A+ Sbjct: 239 -----LKGRRFADLQTIAQEDLDPEVTEAYGEALEKLRAAGAEVVPLEVPELVEAMNLSP 293 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 ++ EA YGL +D++E EV + ++ + + Sbjct: 294 VLFTTEA-----------YGLW---RDVIEA---------SPEVMYPEILARFRSGAEHS 330 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--SMGHIYNDV 433 + Y+ + + +A G D +L+PT P + + E G ++ Sbjct: 331 GADYVAGWAKLEQCRLAWDQA-AAGFDGVLSPTCPILPPEVERLEKEEGYYVRANLLALR 389 Query: 434 FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 T N+ GL A+S+P + GLQ++GQP EE L VG +E Sbjct: 390 NTRIGNLMGLCALSLPTG----RPSCGLQILGQPDCEELLLRVGISVE 433 >gi|293602846|ref|ZP_06685285.1| amidase [Achromobacter piechaudii ATCC 43553] gi|292818640|gb|EFF77682.1| amidase [Achromobacter piechaudii ATCC 43553] Length = 464 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 134/494 (27%), Positives = 221/494 (44%), Gaps = 49/494 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M R + + +SA +++ +++ I+ N +NA + A+ A A A +D+ NG Sbjct: 1 MTAVALRAEIAAGHVSARDVMAAHLTRIQACNPSINAIVTCDAEGALARAAAADEHQANG 60 Query: 67 DARDLEGI-PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A L PI KD F T G+ T S + F P +S + + GA+ LGK N+ Sbjct: 61 GALGLLHGLPIVHKDSFLTAGMRTTYGSPLYRDFIPDRDSLIVMRERAAGAITLGKSNLP 120 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EF GS + +G +P+ + T GGSSGG++AA+A + + GTD GGS+R Sbjct: 121 EFGAGSQTFNAVFGATRNPYDL-----RMTAGGSSGGAAAALAARMAPLADGTDMGGSLR 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PASF VG++P+ GR + + L AG + RTV D A+LL A AG D D Sbjct: 176 NPASFCNVVGLRPSPGRVPQWPSSNPYNPLTVAGPMARTVADVALLLAATAGPDPRDPLS 235 Query: 246 VNLPVPDYERALDQSIQGMTV-------GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 ++ +L + +G+ + G+P + R + + + + D GA+ Sbjct: 236 IDQDPARLLASLSRDFKGVRIAYAPTWGGLPVQRR-------VLQVLESQLPVFTDLGAR 288 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 VE + P A A+ +A G LR E + +L+ ++ + E Sbjct: 289 -VEQACPDFTGANDAF------QALRGQVFAVGYEAALR-EHRHLLK-----DTVIWNIE 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + T V + R D L AR AF Q + ++ P + + FP+ + Sbjct: 336 LGLTQPAATVVQAER--DRAALFAR----------MHAFMQTHEFLIGPVSQVAPFPVDE 383 Query: 419 EENN--SGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 E + + H Y D +++ G PAISVP + +P+G+Q++G+ +E L Sbjct: 384 ETVSCIGDTPMHNYIDWMRSGYYLSLTGHPAISVPCGFTDDGLPVGIQIVGRYRQEHALL 443 Query: 475 SVGQIIEKEAGYFR 488 + E +R Sbjct: 444 QLAHAFELATQQWR 457 >gi|94309440|ref|YP_582650.1| amidase [Cupriavidus metallidurans CH34] gi|93353292|gb|ABF07381.1| Amidase [Cupriavidus metallidurans CH34] Length = 505 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 138/506 (27%), Positives = 217/506 (42%), Gaps = 50/506 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E +F V ++ +L + +A LVD+ A N ++NA + + AR AA +SD R Sbjct: 26 EASFHPVHQAAAQLARGETTAQALVDACHAAWAARNGEINAMVLADFEAARHAARQSDAR 85 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G A L+GIP IK+ F G T S R ++ V ++L GAV+LGK Sbjct: 86 RRAGQALGPLDGIPFSIKESFDVAGWPTTCGSPARRAHRAGSDAVVVERLRAQGAVLLGK 145 Query: 122 LNMDEFAMGSSNETSY---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 N+ +G + SY YG +P TPGGSSGGS+AAV + IG+ Sbjct: 146 TNV---PLGLRDWQSYNAIYGTTRNP-----HDLSRTPGGSSGGSAAAVCAGMSYFDIGS 197 Query: 179 DTGGSIRQPASFTGTVGIKPTYG----RCSRLGIISFA-PSLDQAGIITRTVRDSAILLK 233 D G S+R PA + G K ++G R FA ++ AG + R+ D ++L+ Sbjct: 198 DIGSSLRNPAHYCGVFSHKSSHGIVPLRGHGNAAAGFAGQDINVAGPVARSAYDLELILR 257 Query: 234 AIAGYD--ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 AI+G D E A ++LP D+ R D V + + L + T+ + W Sbjct: 258 AISGPDAAELPAWKLDLPACDHARLAD-----FRVAVLPTHPLAEVDATVSGAIEGLGHW 312 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 L GA++ P A + A+++L D + D E+ Sbjct: 313 LTGQGARVDWNVRPDFDAAALWRTYVLLLRATTSLYMDDAAFADALAKAGDAGN-DEDYA 371 Query: 352 SIGF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 ++ F G + HR ++L + RAR D E F DV+L P Sbjct: 372 TLQFSGATLSHR----DWLL------LQHARARFA------DAWERFFADYDVLLCPAAS 415 Query: 411 TSAFPLG-------KEENNSGSMGHIYNDVFTVA-VNMAGLPAISVPAALCEKKMPLGLQ 462 T+AFPL + + +G+ + + +F + GLP+ P +P+G+Q Sbjct: 416 TTAFPLDEAGEPWQRTIDVNGTAWPLTSQLFWAGHSGLCGLPSTVAPIGPASDGLPVGVQ 475 Query: 463 LIGQPFREETLFSVGQIIEKEAGYFR 488 ++ + F + T Q +E FR Sbjct: 476 IVARRFGDLTSLRFAQQLEAAGHVFR 501 >gi|288935436|ref|YP_003439495.1| allophanate hydrolase [Klebsiella variicola At-22] gi|288890145|gb|ADC58463.1| allophanate hydrolase [Klebsiella variicola At-22] Length = 598 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 120/481 (24%), Positives = 207/481 (43%), Gaps = 63/481 (13%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA---AAEESDKRIINGDARDLEG 73 R+ + + L+ + Q E N + N +I ++++ +A AA E + + L G Sbjct: 18 RNGNTTPRALLAAIRQRAETLNPEFNLFIHLLSEAEQAPFLAALEGH----SPETLPLYG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD I T A +RP +T+ +L GAV +GK N+D+FA G + Sbjct: 74 VPFAIKDNIDLAEIVTTAACPAF-AYRPTQSATIVAQLIALGAVPVGKTNLDQFATGLNG 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTP-GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 S YG R ++ P GGSS GS+ AVA + + ++GTDT GS R PA Sbjct: 133 TRSPYG------RCRNAYHPAYPSGGSSAGSALAVALGVASFALGTDTAGSGRVPAGLNN 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+K T G S G++ +LD + T +++ LL +A D D+ P + Sbjct: 187 LVGLKATKGVISTAGVVPACRTLDCVTFFSATADEASQLLALVARADPQDSYSRRNPQWN 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIVEISLPHTQYAL 311 +A + G G+P+ L++L + + Q + L G V I Sbjct: 247 SRQAFGRPSAGFRFGVPQT--LNFLGCRASEALFAQAVQRLTALGGVPVAIDF------- 297 Query: 312 PAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P A++ L YDG R V G I + + + ++ + + Sbjct: 298 ------APFLAAARL-LYDGPWVAERYAVAGPLIEQQPDAVLPV-----IRDVLAKAPDI 345 Query: 370 LSSRCYDSHY-LRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLGKEEN 421 ++ + + Y L+ K + +A +D +LTPT P +A P+ + + Sbjct: 346 DATATFKAMYQLQGYKAQ-------CDAILDTLDCVLTPTFPRPVTLDELAAEPIARNAD 398 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G+ +T +N+ A+SVP +P G+ L G+ F ++ L S+ + Sbjct: 399 ----LGY-----YTNFMNLLDYAAVSVPCGFMPDGLPSGVTLFGRAFTDQYLLSLADAFQ 449 Query: 482 K 482 + Sbjct: 450 R 450 >gi|559378|dbj|BAA03347.1| amidase [Rhodococcus erythropolis] gi|449863|prf||1920223A amidase Length = 322 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 27/316 (8%) Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA+F G VG KPT+G G ++D G ITRTV D+A++L IAG D D Sbjct: 2 PAAFCGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGRDRNDPRQA 61 Query: 247 NLPVP-DYERALDQSIQGMTVGIPKE---YRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 + Y LD + G+ +GI +E +R+ P +D + S L + G + E+ Sbjct: 62 DSGEDGSYLSTLDSDVDGLRIGIVREGFGHRVS--QPEVDDAVRAAHS-LTEIGCTVEEV 118 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG---KDILEMYENTR---SIGFG 356 ++P +A + +I+ + + DG YG+ EG +++ + + R + Sbjct: 119 NIPWHLHAFHIWNVIATDGGAYQM--LDGNGYGMNAEGLYDPELMAHFASRRIQHADALS 176 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 + VK + G + +++ + Y +AR + L + + A + DV++ PT P A L Sbjct: 177 ETVKLVALTGHHGITTGG--ASYGKARNLVPLARAAYDTALSK-FDVLVMPTLPYVASEL 233 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 ++ + + ++G I N T ++ G P++SVPA L +P+G+ + G+ F + Sbjct: 234 PAKDVDRATFITKALGMIAN---TAPFDVTGHPSLSVPAGLV-NGLPVGMMITGKTFDDA 289 Query: 472 TLFSVGQIIEKEAGYF 487 T+ VG+ EK G F Sbjct: 290 TVLRVGRAFEKLRGAF 305 >gi|46201755|ref|ZP_00208237.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Magnetospirillum magnetotacticum MS-1] Length = 603 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 117/404 (28%), Positives = 184/404 (45%), Gaps = 55/404 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP +KD G+ T A C + ++ ++L GA+++GK NMD+FA Sbjct: 74 LYGIPFAVKDNIDVGGMPTTAGCPDY--AYTAEADAETVRRLLTAGAILVGKTNMDQFAT 131 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG +P+ + + PGGSS GS+ AV+ L + S+GTDT GS R PA Sbjct: 132 GLVGVRSPYGVARNPFNA-----DYIPGGSSSGSAVAVSAGLVSFSLGTDTAGSGRVPAG 186 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F VG+KPT G S G++ SLD + T TV DS +L+ +AGYD DA + P Sbjct: 187 FNNIVGLKPTKGLVSARGVVPACRSLDCVSVFTLTVEDSMSVLEVLAGYDPGDAFSRHAP 246 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL-PHT 307 V A +G +G+P +L + +++ Q + +D G ++VEI P Sbjct: 247 VMPPAPA-----RGRRMGVPASGQLRFFGDDAAQQSYVQAVGRARDLGWQVVEIDFAPFA 301 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 + A Y AE ++ + + + L++ TR I IM G Sbjct: 302 EVADLLYSGPWVAERTAAVGDF------IAAHPSAALDV---TRGI---------IMGGV 343 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAFPLGKEE 420 + + + Y R ++R +T +D++L PT+ T A P+ Sbjct: 344 QKSAVDAFRATY-RLEELRAKAAAQWTL-----MDLMLLPTSGTIYTIDQVMADPVATNT 397 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 N +T VN+ L AI++P+A+ +P G+ L+ Sbjct: 398 NLG---------AYTNFVNLLDLCAIAIPSAMRPDGLPCGVTLM 432 >gi|168069216|ref|XP_001786366.1| predicted protein [Physcomitrella patens subsp. patens] gi|162661528|gb|EDQ48821.1| predicted protein [Physcomitrella patens subsp. patens] Length = 414 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 18/186 (9%) Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 +++LGK N+ E+A+G ++ +YGPV +PW ++TPGGSSGGS+AAVA L AAS Sbjct: 184 SILLGKNNLHEYALGVTSNNPHYGPVHNPWNH-----EYTPGGSSGGSAAAVAADLTAAS 238 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IGTDTGGS+R PA+ G VG+KPTY + G+ + +LD G IT + D A+L A+ Sbjct: 239 IGTDTGGSVRIPAASCGVVGLKPTYNKVPTEGVFYVSWTLDHVGPITANMTDLAVLFSAM 298 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 Y L+Q I+G+ VG+P Y +++ P + Q + L+ Sbjct: 299 TK-------------QSYLPYLNQDIRGLRVGVPSSYFNEHIDPETYALYLQSLEALESL 345 Query: 296 GAKIVE 301 GA +++ Sbjct: 346 GAILID 351 >gi|108864452|gb|ABA94086.2| amidase family protein, putative, expressed [Oryza sativa Japonica Group] Length = 638 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM++ E + +R+K +++ EL +++ ++ + + I + A A+E+D Sbjct: 191 DIAFMSIIELGELIRTKQVTSRELTAVFLRRLKRYGPIIESVITITDDLAYKQAKEADDL 250 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A T S + E++V ++L GAV++ K Sbjct: 251 LEQGKYLGPLHGIPYGLKDIIAVPEYKTTWGSRTFENQILDVEASVYKRLKSTGAVLVAK 310 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 311 LVTGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 362 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++ T+G +R G++S + SLD+ G R+ D A++L AI G D Sbjct: 363 GSITYPAARCGVTALRTTFGTVARTGVMSISESLDKLGPFCRSAIDCAVVLDAIRGKDAG 422 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + + + D I+ +TVG YL D + + L G K+V Sbjct: 423 DPSSREVAIED---PFHVDIRQLTVG--------YL----DSAEMEVVHVLSAKGVKLVP 467 Query: 302 ISLPHT 307 L +T Sbjct: 468 FKLNYT 473 >gi|114321600|ref|YP_743283.1| amidase [Alkalilimnicola ehrlichii MLHE-1] gi|114227994|gb|ABI57793.1| Amidase [Alkalilimnicola ehrlichii MLHE-1] Length = 467 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 131/473 (27%), Positives = 205/473 (43%), Gaps = 81/473 (17%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 N+M + + D LR ++++ LV++ ++ I+ + + A+ V A +A AAA ++D+ + Sbjct: 37 NWMTAAAAVDGLRRHELTSAGLVEACLERIQRRDDAVRAWSCVAADQALAAARQADE--V 94 Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 +A L G+P+GIKD T + T+ S + + P + ++L GAV+LGK Sbjct: 95 GDEAGPLRGVPVGIKDIIDTADMATEYGSPLYRAYVPLRAAECVRRLRRAGAVILGKTVT 154 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA +Y P P R+ TPGGSS GS+AAVA ++GT T GS+ Sbjct: 155 TEFA--------FYAP--GPTRNPHHPGH-TPGGSSSGSAAAVADGQVTLALGTQTAGSV 203 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 +PA+F G +G KPT+G R G+ FA SLD G+ R D ++ +A++ Sbjct: 204 IRPAAFNGVLGYKPTFGAIPRAGVYEFARSLDTVGVFARGPEDLSLARQALSS------- 256 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA--------- 295 E A+ S Q + R+ YL + W QG S + A Sbjct: 257 ---------EPAVQASAQ------VRPRRIAYLRTPM---WSQGDSDMHRALDGFADALA 298 Query: 296 --GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 G + E LP AL + R + EG + L + Sbjct: 299 GLGVAVEEPQLPTGMEAL-----------------VEAQRMIMAREGSEALAEDWARCAD 341 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GF + + G V D Y RA + + F D+ILTP TP A Sbjct: 342 GFSSVLSEFLAFGRTV-----SDDDYARACALGEHWGQVIDGLFAD-YDLILTPATPGEA 395 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P G E ++N +T + G P +++P + +PL QL+G+ Sbjct: 396 -PEGLESTGD----PLFNRTWT----LLGTPCVALPIGRGARDLPLAAQLVGR 439 >gi|190404376|ref|YP_001961007.1| rcorf32 [Agrobacterium rhizogenes] gi|158322172|gb|ABW33589.1| rcorf32 [Agrobacterium rhizogenes] Length = 417 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 110/397 (27%), Positives = 169/397 (42%), Gaps = 41/397 (10%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +G+KD F +G Q S F P + + Q++ D G++++GK E S + Sbjct: 1 MGVKDLFFVEGQLCQRGSRAYKDFAPKMTAPIVQRMIDAGSIIIGKTTTTEMGWSGSGFS 60 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +YGP +PW K T GGSS GS AA+A + ++G+D GGS+R PA+F G Sbjct: 61 EFYGPTRNPWDP-----KLTSGGSSSGSGAALAARMVPFTLGSDGGGSVRIPAAFCGVFA 115 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +K + GR S L AG ++ T +DSA L G D D + DY Sbjct: 116 MKGSLGRVPAW-PWSATEMLSHAGPMSVTAKDSAFLFNIAKGPDPRDHQALPDDGADYTE 174 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 +S + + +G ++P ID+ ++ + L A V P + + + Sbjct: 175 T--RSTKSLRIGFAPSLFGFKVAPEIDRVVREAVDALTKALTIDVRSVSPDWEDPIRIFE 232 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 + A GV YG + + D FG + V +S Y Sbjct: 233 TLWVAGR--------GVAYGSQSDLSD------------FGSGFR------ALVEASARY 266 Query: 376 D-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-----ENNSGSMGHI 429 D YL A K R FE VD++L PT P F +E ++ S + Sbjct: 267 DLKDYLSAAKARAEFAGRVHALFED-VDLLLLPTIPVEPFAADREAPEGFQSPSEVLAWT 325 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 FT N++G PA S+P L +P+GLQ++G+ Sbjct: 326 GWTPFTYPFNLSGNPAASLPCGLTVNGLPVGLQVVGR 362 >gi|256959870|ref|ZP_05564041.1| glutaminyl-tRNA synthase [Enterococcus faecalis Merz96] gi|293385061|ref|ZP_06630895.1| amidase [Enterococcus faecalis R712] gi|293389332|ref|ZP_06633793.1| amidase [Enterococcus faecalis S613] gi|312906050|ref|ZP_07765063.1| amidase [Enterococcus faecalis DAPTO 512] gi|312909396|ref|ZP_07768252.1| amidase [Enterococcus faecalis DAPTO 516] gi|256950366|gb|EEU66998.1| glutaminyl-tRNA synthase [Enterococcus faecalis Merz96] gi|291077739|gb|EFE15103.1| amidase [Enterococcus faecalis R712] gi|291081354|gb|EFE18317.1| amidase [Enterococcus faecalis S613] gi|310628045|gb|EFQ11328.1| amidase [Enterococcus faecalis DAPTO 512] gi|311290420|gb|EFQ68976.1| amidase [Enterococcus faecalis DAPTO 516] Length = 528 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 25/268 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P ++ + L+ AGA+++ ++ Sbjct: 330 --MPNAEEEFATAKKALQKAGAEVIPVT 355 >gi|221068856|ref|ZP_03544961.1| Amidase [Comamonas testosteroni KF-1] gi|220713879|gb|EED69247.1| Amidase [Comamonas testosteroni KF-1] Length = 473 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 119/457 (26%), Positives = 196/457 (42%), Gaps = 56/457 (12%) Query: 42 NAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFR 100 NA+ V A+ AE S R G+A L+G+P+ IKD +G+ T S + Sbjct: 48 NAFTVVDEGGAQQQAEASTLRWQQGNALGPLDGVPVSIKDLVMQQGLPTARGSCVAPAVL 107 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 + ++ V + L GAV+ K E ++ +G + P +D++ T GGSS Sbjct: 108 ANVDAPVVRHLRTAGAVLFAKTTTTEMGCSIHGDSLAHGRTLHP---LDASR--TIGGSS 162 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 G++A +A ++G+D GGS+R PA++ G VG KP++ + FA G Sbjct: 163 CGAAAHLAAGWGPLAVGSDAGGSVRIPAAYAGLVGFKPSFAQIPMWPASPFA-EFAHLGP 221 Query: 221 ITRTVRDSAILLKAIAGYDECD--ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS 278 + R V D L+ IA D D +T + V +R L +GI + +L Sbjct: 222 MARDVADVQALMACIAQADVRDTASTFARVDVELLKRPL-------RIGICRYLGGHWLQ 274 Query: 279 PTIDK-----TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVR 333 I++ + Q L ++V+I L Q + + S L D Sbjct: 275 SEIEQAMLNLSMQLQGRLLNQQPIELVDIDLAGVQTGTEMWAVWCSRVLESGL---DWTE 331 Query: 334 YGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 L+ G D+ + S G Q V+ RAR+ L Sbjct: 332 QELQRAGPDM----QKQLSQGQAQSVR-----------------DLARARQQLRLAAGRL 370 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKE-----ENNSGSMGHIYNDV----FTVAVNMAGLP 444 E F + VD++LTPTT ++A PL + + ++ I N + F+ N+ P Sbjct: 371 GEVFAK-VDILLTPTTASTA-PLAGDFVVDAFPGAAALRAIGNWMAATPFSHPWNLTQQP 428 Query: 445 AISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 A+S+P L + +P GLQ+IG + + + S+G+ +E Sbjct: 429 ALSIPWGLDQAGLPFGLQVIGARYSDSLVLSIGKALE 465 >gi|303318495|ref|XP_003069247.1| Amidase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240108933|gb|EER27102.1| Amidase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320036897|gb|EFW18835.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Coccidioides posadasii str. Silveira] Length = 483 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/281 (33%), Positives = 145/281 (51%), Gaps = 25/281 (8%) Query: 40 QMNAYIEVVAQ---KARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKG-IHTQACSH 94 ++N + VV++ A A+E D+ + R L G+PI +K T+ + T A S+ Sbjct: 5 EVNDTLHVVSELNPDAVETAKELDRERHRENIRGPLHGLPILLKGNIGTRDKLQTSAGSY 64 Query: 95 ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNET----SYYGPVISPWRSMD 149 L + +STV +KL D GA++LGK+ + E+A S+N T +Y G V + Sbjct: 65 ALLNTKLPEDSTVAKKLRDAGAIILGKVGLSEWANFRSTNSTNGWNAYGGQVTGAYYPNQ 124 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 P GSS GS A L A++GT+T GSI P S VG+KPT G SR +I Sbjct: 125 D-----PSGSSSGSGVASDLGLAWATLGTETSGSIVSPGSSNNIVGLKPTVGLTSRYLVI 179 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP---VPDYERALD-QSIQGMT 265 + D G +TRTV+D+A+LL+AIAG D D +P +PDY A +++G Sbjct: 180 PISAHQDTIGPMTRTVKDTAVLLQAIAGKDRNDNYTSAIPFSNLPDYVSACKLTALEGKR 239 Query: 266 VGIPKEYRLDY-----LSPTIDKTWQQGISWLKDAGAKIVE 301 +G+P + P +D ++ +S ++ AGA IV+ Sbjct: 240 IGVPSNVLESFGKNPTNKPVLD-AFRSALSIMESAGAIIVK 279 >gi|325973338|ref|YP_004250402.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A [Mycoplasma suis str. Illinois] gi|323651940|gb|ADX98022.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A [Mycoplasma suis str. Illinois] Length = 499 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 119/437 (27%), Positives = 187/437 (42%), Gaps = 68/437 (15%) Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 P ST+ + L A+ L ++DEF MG++ + G + P + K GGSS Sbjct: 72 PPKSSTIHELLSKTKAIHLITSSLDEFGMGAAGVFGHKGRITQPL-----SPKRVIGGSS 126 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 GS+ ++ L SI TDTGGS R PAS+ G KP++G SR GI+ LD I Sbjct: 127 SGSAYLLSKKLIDFSIVTDTGGSARVPASYNSLYGFKPSFGLVSREGILPLCTLLDTPSI 186 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVN--------LPVPDYERALD------QSIQGMTV 266 + +V A +L I+ D D T + L + + AL+ ++I+ +T Sbjct: 187 MAHSVETIAKVLSVISAPDPADLTTIKTVKKSYYPLNIKNPLEALEKLPKNHKNIKKITF 246 Query: 267 GIPKEYR------LDYLSPTIDKTWQQGISWLKDAGAKIVEISL---PHTQYALPAYYII 317 KE + I K +Q+ + L+ A V +S P Y I+ Sbjct: 247 VAIKEASEAGNRPFNKREKKIRKEFQRLLGRLRFAPNTTVSVSTIDWPPIYLTELIYKIV 306 Query: 318 SPAEASSNLARY--------------DGVRYGLRVEGKDILEMYENTRSIGFGQE----- 358 + +E ++ D + + E L++ + + + E Sbjct: 307 AFSELVTHYLSLSGIVNPWIRGDYYEDNISKKKKQEEDSRLKLLKVSTYYSYDSEKIRAK 366 Query: 359 ----VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 VK R ++G + L + Y +ARKI +L K+ +E +G ++I++PTT A Sbjct: 367 MGSEVKRRHLLGFFFLYGDNRVNIYKKARKIISLYKKRLSELLSRG-EIIISPTTEDIA- 424 Query: 415 PLGKEENNSGSMGHIY-NDVFTVAV---NMAGLPAISVP-----AALCEKKMPLGLQLIG 465 PL K + IY D F V N GLPAIS+P + L K+ +GL LI Sbjct: 425 PLSK------TYSPIYFKDSFQSLVLLANFCGLPAISIPWLHYKSKLDSSKVFMGLHLIS 478 Query: 466 QPFREETLFSVGQIIEK 482 ++ L SV +EK Sbjct: 479 NYREDKYLLSVVSFLEK 495 >gi|162149383|ref|YP_001603844.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] gi|161787960|emb|CAP57560.1| putative Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter diazotrophicus PAl 5] Length = 506 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 131/436 (30%), Positives = 197/436 (45%), Gaps = 49/436 (11%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +KD T+ + T A S L G H ++ V L GA++LGK N+ E+A Sbjct: 82 LYGLPIVVKDNIETRDDLPTTAGSLALAGNVSHRDAPVIALLRAAGAIVLGKANLSEWAN 141 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S S + T GSS GS+ AVA L A+IGT+T GSI PAS Sbjct: 142 FRSAHASSGWSAVGGLTHNPHDRARTACGSSAGSAVAVAAGLAPAAIGTETDGSITCPAS 201 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD--ATCVN 247 G VG+KPT G SR GI+ + S D AG +TRTVRD+A+LL IAG D D + Sbjct: 202 VNGIVGLKPTVGLVSRSGIVPISASQDTAGPLTRTVRDAALLLGVIAGSDPDDPATAAAD 261 Query: 248 LPVPDYERAL-DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 DY L +++G +G+ + + +P + ++ ++ L+D GA +V+I Sbjct: 262 RHHADYLAGLRPDALRGRRIGVIRFAQGG--NPDVRVLFEAALARLRDGGAILVDI---- 315 Query: 307 TQYALPAY--YIISPAEASSNLARYDGVRYGLR---------VEGKDILEMYENTRSIG- 354 PA+ I E + L+ + R GL V +D+ + R+ Sbjct: 316 -----PAFDSSAIDGPELTVLLSEF---RAGLNAYLAHTPAAVTVRDLPALIAFNRAHAD 367 Query: 355 -----FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 FGQ++ R LS Y + AR++ D A + +D ++ PT Sbjct: 368 REMPWFGQDLFERAQ-DAPALSDPAYTTARDTARRLAGAQGIDAMLAHDH-LDALVAPTI 425 Query: 410 PTSAFP---LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + LG + G + +AG P +SVP + +P+GL IG Sbjct: 426 GPAWMTDPVLGDRPGDGTGAGSL--------AAVAGYPHLSVPMGQV-RGLPVGLSFIGP 476 Query: 467 PFREETLFSVGQIIEK 482 + E TL ++G E+ Sbjct: 477 AWSEATLLALGYGFEQ 492 >gi|83768316|dbj|BAE58455.1| unnamed protein product [Aspergillus oryzae] Length = 606 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 128/518 (24%), Positives = 221/518 (42%), Gaps = 82/518 (15%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESD 60 + +V++ +S +++ + +V + I S A+++ AAAEES Sbjct: 111 KYYSVADYHALYKSGELTPIAVVKGLLPLIRRGLSTPGKHSVAFVDSRVDLVLAAAEEST 170 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFR-------PHYESTVTQKLW 112 +R G L +G+P +KD F G T S L+ + P + ++L Sbjct: 171 RRYREGRPLGLFDGVPAAVKDEFDLDGYRTNMGS--LNDYTLEPKSDDPSITNWCIRQLE 228 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GA+++GK++M EF + ++ +YG +P+ D +T GGSS G + AV+ L Sbjct: 229 KAGAIVVGKVSMHEFGLDTTGNNIHYGTPPNPYHP----DYYT-GGSSSGCAYAVSTGLV 283 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GTD GGS+R P+SF VG+KPT+ R S +++A + G + +R A Sbjct: 284 PIALGTDGGGSVRIPSSFCSVVGLKPTHNRLSHYPSVNYASTTSVIGPLAADIRSLAEAY 343 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTV-GIPKEYRLDYLSPTIDKTWQQGISW 291 + A P P +L S +G + GIP E +P + + + + Sbjct: 344 RVFA----TPGPDTPFPAPG-PLSLTPSTRGKKILGIP-EVWFSRSTPDVQRLCRSLLDK 397 Query: 292 L-KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 L + IV I +P +++ A + DG + +T Sbjct: 398 LVTEKDYTIVPIDIP---------FLVEGQTAHAMTILADGA------------ALLPDT 436 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPT 408 +I +RI++ L + YL A+K+R L+ + +++ G+ +I+TPT Sbjct: 437 TNI----TAPNRILL---TLGRTTPATDYLLAQKLRRLLMQHLAALWQEFPGM-IIVTPT 488 Query: 409 TPTSAFP-LGKEENNSG---------SMGHIYNDVFTVAVNMAGLPAISVPAALC----- 453 T + +P + K E G +M +++ N G+PAISVPA Sbjct: 489 TACAGWPVVSKSELKWGLSDGDRTLKAMEYVW------LANFTGIPAISVPAGYADPEGK 542 Query: 454 ---EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 E +P+GL G+ EE L G E+ R Sbjct: 543 HSTEGTVPVGLMGNGEWGSEEQLLQWGLEAEELGADLR 580 >gi|255941748|ref|XP_002561643.1| Pc16g13440 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586266|emb|CAP94014.1| Pc16g13440 [Penicillium chrysogenum Wisconsin 54-1255] Length = 611 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 109/446 (24%), Positives = 206/446 (46%), Gaps = 43/446 (9%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRP 101 A++E A+ RAAAEES +R G + L+G+P+ +KD G + + LD F+ Sbjct: 150 AFLESQAELIRAAAEESTERYKKGKSLGPLDGVPVAVKDEVHLTG-YKRTLGSKLD-FKH 207 Query: 102 HYEST--VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGS 159 ++T ++ D GA+++GK +M E + ++N YG +P ++ GGS Sbjct: 208 GTDATSWCVKQWLDAGAIIIGKTSMHEIGLDTNNNNPNYGTPRNP-----HNKEYYCGGS 262 Query: 160 SGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 SGGS AV L ++G D GGSIR P+SF G G+KP++GR S S AP++ G Sbjct: 263 SGGSGYAVGAGLVPIALGADGGGSIRIPSSFCGIWGLKPSHGRVSGAPSQSLAPTVGVIG 322 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + ++ D A+ + +A ++ P + + T+GI +++ +D Sbjct: 323 PMAASIDDLALAYRIMATPAPPSEDPISSQFPYPAPPHPDTKRTKTIGIVRDW-IDRAEG 381 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + + + + ++ G +++I +P+ A+ + AE +S V+ Sbjct: 382 PVRAVLDRALDYYREQGYNVIDIKIPYLPEGQRAHALTIMAEIASG------------VD 429 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 I ++ + + + +G Y ++++ L ++++R L+ F+ Sbjct: 430 ASKIRQLTAPNKVL---------VSMGMYQITAQ----DLLASQRLRNLLMTHLAHLFKA 476 Query: 400 GVD-VILTPTTPTSAFPLGKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAAL- 452 +I++PTTP + + E + S + + N + N G PAIS PA Sbjct: 477 HPGMLIVSPTTPIPGWHIDGGEADLSRGLSDAKSSVRNMEYVWLANFTGCPAISCPAGYN 536 Query: 453 CEKKMPLGLQLIGQPFREETLFSVGQ 478 + +P+G+ +G+ EE L + + Sbjct: 537 PDSGVPIGVMAMGEWGTEEDLIAFAR 562 >gi|126728542|ref|ZP_01744358.1| Amidase [Sagittula stellata E-37] gi|126711507|gb|EBA10557.1| Amidase [Sagittula stellata E-37] Length = 442 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 117/241 (48%), Gaps = 23/241 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+PI KD + T G+ T+A S +L G P ++ V + NG V LGK +M E A Sbjct: 70 LDGVPISWKDLYDTAGVATEAGSALLKGRMPAQDAEVLRTATLNGLVCLGKTHMSELAFS 129 Query: 131 SS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQP 187 N ++ P ++ D G S +AA F L AA IG+DTGGS+R P Sbjct: 130 GLGLNPSTATSPCVN--------DPEAVAGGSSSGAAASVAFGLAAAGIGSDTGGSVRLP 181 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A + VG+K T GR S G++ S D G + TV D+A++L A+ G Sbjct: 182 ACWNDLVGLKTTTGRLSLKGVVPLIVSFDTVGPLCHTVEDAALVLSALEGS--------- 232 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P PD D S++G + +D L + + Q + L++AGA++V + P Sbjct: 233 -PAPDLRG--DTSLKGRRFATLQTVVMDDLDDAPARAYAQALDRLREAGAELVPLDFPEI 289 Query: 308 Q 308 + Sbjct: 290 E 290 >gi|206562132|ref|YP_002232895.1| putative amidase [Burkholderia cenocepacia J2315] gi|198038172|emb|CAR54123.1| putative amidase [Burkholderia cenocepacia J2315] Length = 471 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 207/488 (42%), Gaps = 36/488 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++++ M+ R +S E +++ ++ I+ + +N A A AA ES+ Sbjct: 1 MNDISMMSAETLLVEYRRHALSPRECMEAVLERIQQFDPLVNCMCSFHADMALQAARESE 60 Query: 61 KRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R + G+ L +G+P+ +KD +G T+ S ++ +L GA++ Sbjct: 61 QRWMRGEPLGLLDGVPVSVKDLIDVQGFPTRYGSLTSPDTLQRSDAPAVSRLRRAGALLF 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK E+ ++ G +PW + TPGGSSGGSS AVA + A S+ TD Sbjct: 121 GKTTTSEYGNKIVTDSPLTGITRNPWDR-----RVTPGGSSGGSSVAVALGMGALSLATD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR PA ++G VG KPT+ G+ L G I R VRD+A++L +G Sbjct: 176 GGGSIRVPACWSGVVGFKPTFDLVPT-GVAGSWTRLSTLGPIARNVRDTALMLSVASGAH 234 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + + + PV DY L+ + G+ V + P + + Q + GA + Sbjct: 235 DPLQSESDRPV-DYRIGLEHGVAGLRVAYCPGIAGVTVDPMVAASVAQAADVFEALGAHV 293 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 ++ + A Y+ S R +++ + + M E R+ +V Sbjct: 294 EQVDVKPL-----ANYLDS---------RMHAIQWSVFF-AQRACAMSEAQRA-QLDSDV 337 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + + G V + + LRAR + + F E + D+++TP P+ Sbjct: 338 QVLVEAGLQVTAPELAGA--LRARHLLGVEMAAFFECY----DLLVTPVFHCGPLPVPGL 391 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 + T N GLPA SVP L +P G+Q++G+ + + + Sbjct: 392 PKT-----LLTAPQQTSWCNQTGLPAASVPCGL-PGGLPTGVQIVGRLHADALVLRAARA 445 Query: 480 IEKEAGYF 487 E G F Sbjct: 446 YELARGAF 453 >gi|321479299|gb|EFX90255.1| hypothetical protein DAPPUDRAFT_190209 [Daphnia pulex] Length = 540 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 116/488 (23%), Positives = 203/488 (41%), Gaps = 43/488 (8%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE 72 ++R++ I++ E+V +I I+ N +N ++ Q A A+++DK I +G D LE Sbjct: 69 KIRTQKITSEEVVSVFINRIKAVNPIINCVVDNRFQLALEEAQKADKLIQSGEKDEETLE 128 Query: 73 ------GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 G+P IKDCF+ G+H + ++S V + + GA+ML N+ E Sbjct: 129 LETPFLGVPFTIKDCFSVAGLHYTSGLVKRKDLIGQFDSDVVALMKNAGAIMLAITNVPE 188 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + + YG +P+ T++ T GGSSGG + +A IG+D GGSIR Sbjct: 189 LWMWWESLNNVYGRSRNPY----DTNR-TVGGSSGGEAGLLASAGSPFGIGSDIGGSIRL 243 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT----RTVRDSAILLKAIAGYDECD 242 PA F G G KPT G S A + Q ++T R D + + +A + Sbjct: 244 PAFFNGIFGHKPTSGIVSNHEQQPVAGKVLQTYLVTGPMSRFCSDLLPMYRILAAGNTKK 303 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL-KDAGAKIVE 301 D + +L + K L + P + + ++ + + K + + Sbjct: 304 LKL------DEKVSLSKIRYFYVEHFGKNPLLSRVHPDLKEAQRKVVRHIEKTYNVPVQK 357 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P +A+ + + A + +R G + + GQ Sbjct: 358 MKFPKLYHAMEMWSVKMTAAGNPPFVAELAMRKGQ-------ISLIAEFLKYCVGQCEHT 410 Query: 362 RIMIGTYVLSSRCYDS-HYLRARKIRTL--IKRDFTEAFEQGVD-VILTPTTPTSAFPLG 417 + +L C S H L + I ++++ E G D V+L P PT++F Sbjct: 411 LFALAMGLLEKLCPPSTHPLSVKMIEMCDELQKELQELL--GDDGVLLVPPHPTASF--- 465 Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ S+ ++ + N+ G P VP L +PLG+Q+IG + +V Sbjct: 466 ---YHNQSLTRPFDFAYVAIFNILGFPITQVPLGLGAWGVPLGVQVIGNLHNDHLTLAVA 522 Query: 478 QIIEKEAG 485 +E+ G Sbjct: 523 AELERAFG 530 >gi|257081001|ref|ZP_05575362.1| glutaminyl-tRNA synthase [Enterococcus faecalis E1Sol] gi|256989031|gb|EEU76333.1| glutaminyl-tRNA synthase [Enterococcus faecalis E1Sol] Length = 528 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/303 (29%), Positives = 153/303 (50%), Gaps = 28/303 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAI---ENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 ++E + + + ++ EL Y+ I + ++ MN+ E+ Q A A+ D++ Sbjct: 73 ITELQQAIANGTLTYEELTAFYLDRILQFDQIDNGMNSISEINPQ-AIKEAKAFDQQSSQ 131 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + L GIP+ +K+ T + + A ++ L F+P ++ V +KL + A++LGK+N+ Sbjct: 132 TPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEAQALVLGKVNLS 191 Query: 126 EFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 E A S +S +G ++P+ + K TP GSS GS A+V + A S+GT+T Sbjct: 192 ELANYMSMKAPSGYSSKHGQTLNPYGPL----KITPSGSSSGSGASVTMNIGAFSLGTET 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PAS VG KPT+ S G++ APSLD G I R+V D+A GY+ Sbjct: 248 MGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAA------QGYNA 301 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 V P D + ++QG +G+ + P+ ++ + L+ AGA+++ Sbjct: 302 FKKDTV--PSIDSTKFTKNNLQGQRIGLLE-------MPSAEEEFATAKKALQKAGAEVI 352 Query: 301 EIS 303 ++ Sbjct: 353 PVT 355 >gi|115485767|ref|NP_001068027.1| Os11g0536800 [Oryza sativa Japonica Group] gi|113645249|dbj|BAF28390.1| Os11g0536800 [Oryza sativa Japonica Group] gi|222616090|gb|EEE52222.1| hypothetical protein OsJ_34134 [Oryza sativa Japonica Group] Length = 669 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM++ E + +R+K +++ EL +++ ++ + + I + A A+E+D Sbjct: 222 DIAFMSIIELGELIRTKQVTSRELTAVFLRRLKRYGPIIESVITITDDLAYKQAKEADDL 281 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A T S + E++V ++L GAV++ K Sbjct: 282 LEQGKYLGPLHGIPYGLKDIIAVPEYKTTWGSRTFENQILDVEASVYKRLKSTGAVLVAK 341 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +++ AG + A IG++T Sbjct: 342 LVTGSLAY---DDIWFGGRTRNPW----NIEEFSTGSSAGPAASTSAGMVPFA-IGSETA 393 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++ T+G +R G++S + SLD+ G R+ D A++L AI G D Sbjct: 394 GSITYPAARCGVTALRTTFGTVARTGVMSISESLDKLGPFCRSAIDCAVVLDAIRGKDAG 453 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + + + D I+ +TVG YL D + + L G K+V Sbjct: 454 DPSSREVAIED---PFHVDIRQLTVG--------YL----DSAEMEVVHVLSAKGVKLVP 498 Query: 302 ISLPHT 307 L +T Sbjct: 499 FKLNYT 504 >gi|257083663|ref|ZP_05578024.1| glutaminyl-tRNA synthase [Enterococcus faecalis Fly1] gi|256991693|gb|EEU78995.1| glutaminyl-tRNA synthase [Enterococcus faecalis Fly1] Length = 528 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 25/268 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQSSQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSAASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVFDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+ ++ + L+ AGA+++ ++ Sbjct: 330 --MPSAEEEFTAAKKALQKAGAEVIPVT 355 >gi|116695810|ref|YP_841386.1| amidase [Ralstonia eutropha H16] gi|113530309|emb|CAJ96656.1| Amidase [Ralstonia eutropha H16] Length = 498 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 135/504 (26%), Positives = 216/504 (42%), Gaps = 49/504 (9%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F + E RL + ++SAVELVD A + + +NA + ARAAA ESD+R Sbjct: 11 FPPLWEVAQRLAAGEVSAVELVDGCEAAWHDWHGIINALVLSDFDAARAAALESDRRRRA 70 Query: 66 GDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G AR L+G+P +K+ F G T + + G +++ V Q+L D GAV+LGK N+ Sbjct: 71 GQARGVLDGVPFSVKESFDVAGWPTTCGNPAMQGRAAQHDAAVVQRLRDAGAVLLGKTNV 130 Query: 125 DEFAMGSSNETSY---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 +G + SY YG +P TPGGSSGGS+AAV L +G+D G Sbjct: 131 ---PLGLRDWQSYNAIYGTTRNP-----HDPSRTPGGSSGGSAAAVCAGLSYFDVGSDIG 182 Query: 182 GSIRQPASFTGTVGIKPTYGRCSR----LGIISFAPS-LDQAGIITRTVRDSAILLKAIA 236 S+R PA + G +KP++G +G F ++ AG + R+ RD +L+AIA Sbjct: 183 SSLRNPAHYCGIFSLKPSHGLVPLAGHGVGPARFGEQDINVAGPLARSARDLEPVLRAIA 242 Query: 237 GY--DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 G DE ++LP + R D + + E + ++ I+K WL Sbjct: 243 GPHGDEALPYRLDLPECPHRRLADFRVAVLPTHAQAESDGE-VAAQIEKL----GYWLAG 297 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 GA++ P A + ++ A++ + D ++ Sbjct: 298 QGARVDWHVRPDFDAAELWHVYVTLLRATTAVHMDDAAYADALNRTATAAADDHAYATLQ 357 Query: 355 F-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 + G ++HR + V R T +R F+ DV+L P T+A Sbjct: 358 YTGATLRHRDWLRLQVARER-----------FATAWRRFFST-----YDVLLCPAAATTA 401 Query: 414 F-------PLGKEENNSGSMGHIYNDVFTVA-VNMAGLPAISVPAALCEKKMPLGLQLIG 465 F P + +G + +F + GLP+ P +P+G+Q++ Sbjct: 402 FALDEAGQPWQRSLTVNGRAQPMTTQLFWAGHSGLCGLPSAVAPIGPGTSSLPVGVQIVA 461 Query: 466 QPFREETLFSVGQIIEKEAGYFRP 489 +R+ T ++E FRP Sbjct: 462 GRYRDLTALRFASLLEGAGYAFRP 485 >gi|148547826|ref|YP_001267928.1| amidase [Pseudomonas putida F1] gi|148511884|gb|ABQ78744.1| Amidase [Pseudomonas putida F1] Length = 485 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 124/467 (26%), Positives = 208/467 (44%), Gaps = 52/467 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRIINGDARD-LEG 73 + ++ +S E++ +Y+ +E N Q+NA + + A+ A AE D+ + G +R + G Sbjct: 21 IHARQLSCREVMQAYLGHVERFNRQVNALVSLRPAEVLLAEAETRDRELACGHSRGWMHG 80 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT G+ T S + P ++ ++ +GA+++GK N+ EF +GS + Sbjct: 81 MPQAIKDLAATAGLRTTLGSPLFAEQVPEQDAISVARVRASGALIMGKSNVPEFGLGSQS 140 Query: 134 ETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 S +G +T+ + P GSSGG++AA+A L + G+D GS+R PA+ Sbjct: 141 YNSLFG---------TTTNAYDPSRVAGGSSGGAAAALAMRLLPVADGSDMMGSLRNPAA 191 Query: 190 FTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 F G++P+ GR F L G + R+V D A LL AG D ++ Sbjct: 192 FNNLFGLRPSQGRVPHGPAPELFVQQLATEGPMGRSVVDVARLLSIQAGVDARAPLSLSE 251 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D+ L + +G+ VG +Y YL P D +S + A A E+ + Sbjct: 252 GWRDFTVGLPRDFRGVRVGWLGDYN-GYL-PMDDGV----MSLCESALADFAELGC-QVE 304 Query: 309 YALPAYYIISPAEASSNLAR----YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PA+ +LAR + R+ L V G + + E + + Sbjct: 305 ACQPAF----------DLARLWQCWLTHRHFL-VHGNLGAAYADPGKRALLKPEAQWEVE 353 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G + ++ Y + R+ R + K FE+ D +L P+ FP + Sbjct: 354 GGLQLSAAALYQASLDRSDWYRAMGK-----LFER-YDFLLLPS--AQVFPFDARQPWPT 405 Query: 425 SMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +G D + + +AGLP+ISVP +P+GLQ+IG Sbjct: 406 VVGGRAMDTYHRWMEVVIGPTLAGLPSISVPVGFNAAGLPMGLQIIG 452 >gi|330961937|gb|EGH62197.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 599 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 28/254 (11%) Query: 32 QAIENSNSQMNAYIEV-----VAQKARAAAE----ESDKRIINGDARDLEGIPIGIKDCF 82 + I N + NA++ + + ++AR A E D+R G A L GIP GIKD Sbjct: 78 EEIYGDNGKYNAFVRLEDLSTLLEQARLADEWLTNPDDER---GPAPPLCGIPFGIKDSV 134 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 A KG+ ++ + G ++T +L GA+++G E + + + + G Sbjct: 135 AIKGLESKNGTQAFSGNLALRDATCVARLRAQGAIIIGHTICSELSTHTVGQ--FAGNAW 192 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 P R TPGGSS GS A LCAA++G +T GSI PA+ G IKP+ G Sbjct: 193 DPAR--------TPGGSSQGSGVAPVARLCAATLGEETSGSIIIPAAANGASAIKPSLGL 244 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNLPVPDYERALDQS- 260 S G++ D G + R++RD++++L +AG D E D ++ P + ++ S Sbjct: 245 VSGAGVVPLRSGWDVIGPMARSIRDASLVLSILAGPDGENDPQSLSAPPIGDQLSITPSA 304 Query: 261 ----IQGMTVGIPK 270 ++G+T+GIP+ Sbjct: 305 GSAPLEGLTIGIPQ 318 >gi|290509482|ref|ZP_06548853.1| allophanate hydrolase [Klebsiella sp. 1_1_55] gi|289778876|gb|EFD86873.1| allophanate hydrolase [Klebsiella sp. 1_1_55] Length = 598 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 120/481 (24%), Positives = 207/481 (43%), Gaps = 63/481 (13%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA---AAEESDKRIINGDARDLEG 73 R+ + + L+ + Q E N + N +I ++++ +A AA E + + L G Sbjct: 18 RNGNTTPRALLAAIRQRAETLNPEFNLFIHLLSEAEQAPFLAALEGH----SPETLPLYG 73 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD I T A +RP +T+ +L GAV +GK N+D+FA G + Sbjct: 74 VPFAIKDNIDLAEIVTTAACPAF-AYRPTQSATIVAQLIALGAVPVGKTNLDQFATGLNG 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTP-GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 S YG R ++ P GGSS GS+ AVA + + ++GTDT GS R PA Sbjct: 133 TRSPYG------RCRNAYHPAYPSGGSSAGSALAVALGVASFALGTDTAGSGRVPAGLNN 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+K T G S G++ +LD + T +++ LL +A D D+ P + Sbjct: 187 LVGLKATKGVISTAGVVPACRTLDCVTFFSATADEASQLLALVARTDPQDSYSRRNPQWN 246 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIVEISLPHTQYAL 311 +A + G G+P+ L++L + + Q + L G V I Sbjct: 247 SRQAFGRPSAGFRFGVPQT--LNFLGCRASEALFAQAVQRLTALGGVPVAIDF------- 297 Query: 312 PAYYIISPAEASSNLARYDGVRYGLR--VEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P A++ L YDG R V G I + + + ++ + + Sbjct: 298 ------APFLAAARL-LYDGPWVAERYAVAGPLIEQQPDAVLPV-----IRDVLAKAPDI 345 Query: 370 LSSRCYDSHY-LRARKIRTLIKRDFTEAFEQGVDVILTPTTP-------TSAFPLGKEEN 421 ++ + + Y L+ K + +A +D +LTPT P +A P+ + + Sbjct: 346 DATATFKAMYQLQGYKAQ-------CDAILDTLDCVLTPTFPRPVTLDELAAEPIARNAD 398 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G+ +T +N+ A+SVP +P G+ L G+ F ++ L S+ + Sbjct: 399 ----LGY-----YTNFMNLLDYAAVSVPCGFMPDGLPSGVTLFGRAFTDQYLLSLADAFQ 449 Query: 482 K 482 + Sbjct: 450 R 450 >gi|167837468|ref|ZP_02464351.1| amidase [Burkholderia thailandensis MSMB43] Length = 494 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 111/429 (25%), Positives = 182/429 (42%), Gaps = 55/429 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P VT +L GAV++G+ NM EFA Sbjct: 110 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAAADAVTVARLKRAGAVLVGRTNMSEFAF 169 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 170 SGLGLNPHYGTPRSPYRRGVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 229 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + Sbjct: 230 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLE---------- 279 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P A + ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 280 -PHVSAA--RPLEGVRLGMLTNYVTDGVDAHVAASLDAALKHLEAAGAIVSDARF----- 331 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRI 363 +P + ++ R+ G +E Y R + + V RI Sbjct: 332 --------APLDTLPDINRF----------GFASIEAYAWHRPLVARHRDAYDPRVLARI 373 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + G + + YL R + + Q D ++ PT P + + + E + Sbjct: 374 LRGEPASA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELEQDD 428 Query: 424 GSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQI 479 + + V A N A+S+P C + P+GL L P ++ L ++GQ Sbjct: 429 DAFTRMNALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQA 485 Query: 480 IEKEAGYFR 488 +E R Sbjct: 486 VEAVLATIR 494 >gi|326473324|gb|EGD97333.1| N-acylethanolamine amidohydrolase [Trichophyton tonsurans CBS 112818] Length = 574 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 117/484 (24%), Positives = 213/484 (44%), Gaps = 46/484 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK----ARAAAEESD 60 ++ ++ R+ ++ ++ +V++ + AI S + E +Q RA+AE + Sbjct: 84 DYYTSADYRELYKTGKLTPTAVVEALLPAIRRDTSPPGEFSEGFSQSKIDLVRASAEAAT 143 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R NG ++GIP+ IKD G S + P + S +K + GA+++ Sbjct: 144 QRWANGTPLGPMDGIPVAIKDEVDIDGYDKYLSSKVNFTANPSFTSWCVKKWEEAGAIVI 203 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N PV+ R+ + +T G S G A AG + A +G D Sbjct: 204 GKTVMHEIGLDTTNNN----PVVGTPRNPHNPGYYTGGSSGGSGYAVGAGIVPLA-LGAD 258 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A ++ G + + D A+ + ++ D Sbjct: 259 GGGSIRIPSNYCGIYGLKTTHGRVSAAPTRRLATTVGVFGPMASNIDDLAMGYRIMSAPD 318 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAK 298 + P P S +G +G+ K++ ++ +P + + + I + +D G + Sbjct: 319 PNNPVSAAFPDPLLSVPSPSSSRGKVIGVYKDW-VERSNPDVLAMFNKAIDYYRDEQGYE 377 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I++I++P+ + + E SS L + K I ++ TR Sbjct: 378 IIDITIPYIPEGGKCHALSILNEISSGLTK------------KQISQLSAPTR------- 418 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPL 416 I V ++ Y ++++R L+ + F++ G+ VI TPTTPT+ + Sbjct: 419 ------IVVSVGGTQGLAQDYFASQRMRHLLMNHLSFLFQKYPGL-VIATPTTPTAGSKI 471 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 E + S S + + + N G PAIS P E +P+GL +G+ E Sbjct: 472 SGGEADLTNGISDSNATLQSMEYVYLANFTGCPAISCPMGYDDEPSVPVGLMGMGEWGSE 531 Query: 471 ETLF 474 E L Sbjct: 532 EALM 535 >gi|170694105|ref|ZP_02885260.1| Amidase [Burkholderia graminis C4D1M] gi|170140845|gb|EDT09018.1| Amidase [Burkholderia graminis C4D1M] Length = 507 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 127/475 (26%), Positives = 208/475 (43%), Gaps = 50/475 (10%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + E R + SK +S +EL ++ I IE + +NA AR AA+ ++ ++ G Sbjct: 6 LPAPELRKMIGSKALSPIELTEACIARIEALDPYVNAMAATDFDAARRAAQAAEDAVMRG 65 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+P GIKD AT G+ T S + P ++ + +L GA+++GK N+ Sbjct: 66 VPLGLLHGLPAGIKDLEATAGLLTTHGSLLYRDLLPAEDNLLVARLRAAGAIVVGKTNVP 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G++ +G +P+ + SSGGS+AA+A + G+DTGGS+R Sbjct: 126 ELGAGANTRNPVWGATGNPFDPNRNAGG-----SSGGSAAALACDMLPVCTGSDTGGSLR 180 Query: 186 QPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA+ G VG +P+ G S ++ + P + G + R V ++ + L A AG D D Sbjct: 181 IPAALCGVVGFRPSPGLVPSPRKLLGWTP-ISVVGPMGRNVAEARLQLAATAGLDSGDLL 239 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + + + + + VG +++ + + I +T+++ + ++ A I + Sbjct: 240 SYEVDAGAFLAPREIDLSRLRVGWTEDFGVCDVDDDIRRTFRRKLEAMRGMFAVCEPIDV 299 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 A + ++ R + GLR YEN G + Sbjct: 300 DFAD-----------AHRAFDVIRAESFVAGLRAA-------YENDPG-SLGPNTRANYE 340 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK------ 418 G + + +H +T I R F + F + DVIL PTTP S FP + Sbjct: 341 QGAAMTLADSASAH-----AAQTAIARRFQQLFGR-YDVILAPTTPVSPFPWTQMFASRV 394 Query: 419 ----EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 +EN + Y V T+ N PA S+P E MP GLQ+IG PFR Sbjct: 395 GGRAQENYYRWLALTY--VTTLCTN----PAASLPCGKDEAGMPFGLQVIG-PFR 442 >gi|170694150|ref|ZP_02885305.1| Amidase [Burkholderia graminis C4D1M] gi|170140890|gb|EDT09063.1| Amidase [Burkholderia graminis C4D1M] Length = 486 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 6/257 (2%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S+L + V E + S VE++ + + ++ + +NA+ ++ A E + Sbjct: 3 SDLCDLTVREVHALYEAGGTSPVEVMQAVLHRVQLLDPAVNAFCQIAGDALDMARESEAR 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L+G+P+ IKD A G+ T+ S D ++S +L ++GA+ K Sbjct: 63 WHRKRPLGPLDGVPVSIKDNVAVSGLPTRYGSRATDDVPASHDSPCVARLRESGAICFAK 122 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 + +FA ++ G +PW + TPGGSSGG++AAV+ + A+IGTD G Sbjct: 123 TTLPDFAHKIVTDSPLTGVTRNPWDTAR-----TPGGSSGGAAAAVSLGMAPAAIGTDGG 177 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSIR PA+FTGT G KP++GR FA L G +TR V D+A +L I+ D Sbjct: 178 GSIRIPAAFTGTFGFKPSFGRVPHAPRGPFA-LLSHIGPMTRCVADAARILTVISRPDSR 236 Query: 242 DATCVNLPVPDYERALD 258 D + DYER L+ Sbjct: 237 DWYALPFEGSDYERGLE 253 >gi|39968191|ref|XP_365486.1| hypothetical protein MGG_02188 [Magnaporthe oryzae 70-15] gi|145013070|gb|EDJ97711.1| hypothetical protein MGG_02188 [Magnaporthe oryzae 70-15] Length = 559 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 27/310 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +K ++V+L +Y+ I N +A E+ + AAE ++R L GIP Sbjct: 50 LDTKLFTSVDLTKAYMARINEVNDYFHAVTEMNPDALKIAAEMDEERARGKTRGPLHGIP 109 Query: 76 IGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSN 133 + +K A+ ++T S +L G + ++TV +K+ + G V+LGK NM ++A SS+ Sbjct: 110 VLLKMSMASADAMNTTGGSTLLLGAKFARDATVVRKVREAGGVILGKANMSQWATFRSSD 169 Query: 134 ETSYYGPVISPWRSMDST------DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +S G W + D P GSS GS+ A L AA++GT+T GS+ P Sbjct: 170 NSSSNG-----WSAHGGQCLGAYHDDMDPSGSSSGSAVATTLGLAAAALGTETDGSVILP 224 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VGIKP+ G SR ++ + D G I RTV+D+A LL+ I G D+ D Sbjct: 225 AQTASLVGIKPSVGLTSRFLVLPVSEHQDTVGTIARTVKDAARLLQPIVGRDDRDNYTDA 284 Query: 248 LP-----VPDYERAL--DQSIQGMTVGIPK------EYRLDYLSPTIDKTWQQGISWLKD 294 +P PDYERA +++G +G+P +RL P + + ++ + +K Sbjct: 285 IPFEQVATPDYERATQSQDALRGARLGVPTNTIALFRHRLPDEDPVM-QAFRAAVDEVKR 343 Query: 295 AGAKIVEISL 304 AGA +VE + Sbjct: 344 AGAVVVEANF 353 >gi|27378399|ref|NP_769928.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium japonicum USDA 110] gi|27351547|dbj|BAC48553.1| blr3288 [Bradyrhizobium japonicum USDA 110] Length = 459 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 136/495 (27%), Positives = 216/495 (43%), Gaps = 52/495 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + + +E + ++S+ + V++++ I + ++++ A++ V A+ AR AE D Sbjct: 1 MTSVCDLTATELARAIARGELSSRDAVEAHLARIADLDTRLAAFVTVDAEGARRLAEICD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 L G+PIGIKD T G+ T S + P + V +L GA++LG Sbjct: 61 A--APAPIGPLHGVPIGIKDLTDTGGLTTTYGSALFRDHVPAEDELVVARLRRAGAIILG 118 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF G+ GP +P+ T GGSSGGS+ AVA + + GTD Sbjct: 119 KTNTPEFGFGAVCTNRLRGPTRNPF-----DPALTSGGSSGGSAVAVAAGMVPLAHGTDF 173 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS+R PASF I+PT GR L G + R V D A+ L AG D Sbjct: 174 GGSVRTPASFCDVASIRPTPGRIPSPRRPLGWDMLASHGFLARGVDDLALALSVCAGSDA 233 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPK-EYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D + V D D++I G P+ D+ + + + + +A A++ Sbjct: 234 HDPLSARV-VSD-----DRAIAGR----PRIAVTPDFGVAPVAREVRARFAAACEALARV 283 Query: 300 VEI--SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + S P A+ + + A +++ YG D+L+ TR Sbjct: 284 ANVVPSSPDCGGAIETFRTLRAAHIANS--------YG------DLLK----TRRAELTP 325 Query: 358 EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG 417 V I G ++ YL A + RT I R F E F + D ++ P S P Sbjct: 326 TVIWNIEAG-----AKLSAEDYLTAERRRTAIYRSFRELFTRA-DFLVAPA--ASVLPWP 377 Query: 418 KEENN----SGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 E ++ G+ D V V++ G P +++PA ++P G+Q+I P E Sbjct: 378 NEISDVTAIDGAALETPIDYLAVTFIVSLVGFPVLTLPAPRDVNELPFGIQIIAPPGGES 437 Query: 472 TLFSVGQIIEKEAGY 486 LF+ G+ IE E G+ Sbjct: 438 RLFAFGRAIENELGF 452 >gi|145602872|ref|XP_362311.2| hypothetical protein MGG_04756 [Magnaporthe oryzae 70-15] gi|145011235|gb|EDJ95891.1| hypothetical protein MGG_04756 [Magnaporthe oryzae 70-15] Length = 494 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 21/300 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L+ + S+V+LV++Y+ I++ + + EV AA+ R A L GIP Sbjct: 44 LQDRLFSSVDLVNAYLARIQDVDGYFKSVTEVNPDALWIAAQRDAARSRGEVAGPLHGIP 103 Query: 76 IGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +K+ AT ++ + S IL G + +S V +KL + GA++LGK N+ ++A Sbjct: 104 ILLKNNIATADKMNNTSGSTILLGAKVPRDSFVVKKLREAGAIILGKANLSQWA------ 157 Query: 135 TSYYGPVI-SPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +Y G + S W + + P GSS GS+ A A L A ++GT+T GSI P Sbjct: 158 -NYRGSYLASGWSAHGGQCLGAYVPEQEPSGSSSGSAVAAALGLAAGTLGTETDGSIISP 216 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 +S+ VG+K T G SR +I + D G +TRTV+D+AILL+AIAG D D Sbjct: 217 SSYNNIVGLKTTVGLTSRDLVIPISEHQDTVGPMTRTVKDAAILLQAIAGVDANDNYTSA 276 Query: 248 LP--VPDYERALDQS-IQGMTVGIPK---EYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +P +PDY A D+ ++G +GIP EY D + + + ++DAGA++V+ Sbjct: 277 IPGEIPDYVAACDKDKLKGARIGIPTNVLEYIYDQGFHVELEAFYDALDVIRDAGAELVD 336 >gi|240277070|gb|EER40580.1| acetamidase [Ajellomyces capsulatus H143] gi|325095011|gb|EGC48321.1| acetamidase [Ajellomyces capsulatus H88] Length = 545 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 129/516 (25%), Positives = 200/516 (38%), Gaps = 99/516 (19%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGDAR-DLEGIPIG 77 + +A ++ +YI+ ++ NA E+V ++A A E D+ G R L G+P+ Sbjct: 71 EFTAEDVTLAYIKRATVAHQLTNALTEIVFEEALEQARELDRSFNTTGKVRGPLHGVPVT 130 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 +KD F KG+ T ++ F P E V Q L GA+++ K N+ + M E Sbjct: 131 LKDQFNIKGVDT-TLGYVGRSFCPAAEDAVLVQILKSLGAIIIAKTNLSQSIMWCETENP 189 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 +G ++P S KFT GGS+GG +A +A IGTD GGSIR P + G G+ Sbjct: 190 LFGLTVNPRNS-----KFTSGGSTGGENALLALHGSILGIGTDIGGSIRIPQNMVGLYGL 244 Query: 197 KPTYGRCSRLGII------SFAPSLDQAGIITRTVRDSAILLKAIAGYD--ECDATCVNL 248 KP+ GR G+ PS G +TR + + K +A D C L Sbjct: 245 KPSSGRFPYYGVPVSTEGQEHVPS--SVGPMTRDLPSIIYVTKHLANSQPWTLDPRCAPL 302 Query: 249 PVPDYERALDQSIQGMTVGI-----------PKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 P D QS + + +G+ P + L LS + + I W D Sbjct: 303 PWRDEMFTEIQS-RPLLIGLIVDDGVVKVHPPIQRALHELSAKLQAAGHEVIPWNTDGHQ 361 Query: 298 KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ 357 + V+I + AYY + E +R + G+ L E + G Sbjct: 362 ECVDI--------MDAYYTVDGGE---------DIRNDVMAAGEPFLPHVEKLVNKGKAI 404 Query: 358 EVKHRIMIGTY-VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 V + V + Y + R R + + VDV+LTPT P A P Sbjct: 405 SVYQYWQLNRRKVAVQKGYLDKWNRTR----------APSSNRTVDVLLTPTMPHVAVP- 453 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA-LCEKK------------------- 456 +G +T N A++ PA +C++K Sbjct: 454 ---HRCCRWVG------YTKVWNFLDYTALTFPAGEVCKEKDKLPVTPYEPRNELDEWNW 504 Query: 457 ----------MPLGLQLIGQPFREETLFSVGQIIEK 482 P+ LQ++G+ EE + +IEK Sbjct: 505 GLYDADSMAGYPVNLQIVGKKLEEEKVLGAAVVIEK 540 >gi|197295122|ref|YP_002153663.1| urea amidolyase allophanate hydrolase subunit [Burkholderia cenocepacia J2315] gi|195944601|emb|CAR57205.1| urea amidolyase, allophanate hydrolase subunit [Burkholderia cenocepacia J2315] Length = 623 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 135/489 (27%), Positives = 214/489 (43%), Gaps = 60/489 (12%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 A++ R R + D++ LVD+ I A ++ +A+I + + D+ + D Sbjct: 14 AIAALRARYAAGDLTPPALVDA-IAAHFDAGDPHHAWIRPLTR---------DEMMPYAD 63 Query: 68 A---RD-----LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVM 118 A RD L G+P IKD GI T A C + P + V ++L GA+ Sbjct: 64 ALAGRDIASLPLYGVPFAIKDNIDLAGIPTTAGCPAY--AYTPARSAPVVERLIAAGAIP 121 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N+D+FA G S + S YG + ++D ++ GGSS GS+ AVA + S+GT Sbjct: 122 VGKTNLDQFATGLSGQRSPYGACRN---ALDP--RYASGGSSSGSAVAVALGVATFSLGT 176 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GS R PA+F G VG+KPT G S LG++ SLD + R+ D+ ++ A G Sbjct: 177 DTAGSGRVPAAFHGLVGLKPTRGVLSTLGVVPACRSLDCVSVFARSADDARVVFAAAHGV 236 Query: 239 DECDA---TCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLS-PTIDKTWQQGISWLK 293 E D L D RA G + G P+ +L++ + W + L+ Sbjct: 237 TEGDPYGRAWQPLLGADGLRAQPARPLGQVRFGTPRADQLEFFGDASYRAAWGAALERLR 296 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 GA++VEI +P A++ L YDG R+ E Sbjct: 297 ATGARLVEIDF-------------APFLAAARL-LYDGPWVAERLAAIGAFAAREPDAL- 341 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 V I+ G S+ + + R +R R + G+D I+ PT+ T+A Sbjct: 342 ---HPVIREIVGGASRFSAADAFAAFDRLAALRVDAARAW-----DGLDAIVMPTSATTA 393 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKMPLGLQLIGQPFR 469 + E + ++ + +T VN+ L AI+VPA C +P G+ +G+ Sbjct: 394 T-VDALEADPIAINSRFG-YYTNFVNLLDLSAIAVPAGTCPTGPHAGLPFGITFVGRAHD 451 Query: 470 EETLFSVGQ 478 + L + Sbjct: 452 DARLLDLAH 460 >gi|296137361|ref|YP_003644603.1| Amidase [Thiomonas intermedia K12] gi|295797483|gb|ADG32273.1| Amidase [Thiomonas intermedia K12] Length = 501 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 135/521 (25%), Positives = 221/521 (42%), Gaps = 90/521 (17%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +R+R + A E++ S I + N ++NA I + + A+A +++ GDA G Sbjct: 21 ERIRRGECDAAEVLQSAIARCDAVNPRINAVIADLREHAKAELKQAR----TGDA-PFAG 75 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNMDEFAMGSS 132 +P +KD + + + RP ++ + W+ G ++ GK N E + + Sbjct: 76 VPFLLKDLSMDLAGYGTSQGNAALARRPVAQTDAVVRRWEQAGLLIFGKTNTPELGLKAI 135 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E +GP +PW ++D T SSGG++AAVA + A+ D GGSIR PA++ G Sbjct: 136 TEPVAFGPTRNPW-NLDHTPGG----SSGGAAAAVAAGIVPAAAAGDGGGSIRIPAAYCG 190 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKAIAGYDECDATC 245 G+KP+ GR +S AP D+ I+RTVRDSA LL IAG + D Sbjct: 191 LFGLKPSRGR------VSCAPQFDEQWEGAVSTHAISRTVRDSAALLDVIAGPEPGDPFI 244 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 V P + + L Q + + + + +D W + S D G + + Sbjct: 245 VQPPARPFSQELQAPTQRLRIAL---CTASPIGGAVDAAWSRAAS---DCGQLLQSLGH- 297 Query: 306 HTQYALPAYYIISPAEASSNLAR-YDGVRYG--------LRVEGKDILEMYENTRSIGFG 356 H ++ I P LAR Y + +G + +G +T+++G Sbjct: 298 HVEW-------IDPVGDGMQLARDYLTMYFGQVAAQLTWWQQQGVPASAFETDTQALGL- 349 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--- 413 + + G Y L+ ++S R + L R D+ LTPT Sbjct: 350 --IGRGLAAGDYALARARWNSPM---RALGQLFTR---------FDLYLTPTCAQPPARI 395 Query: 414 ------------------FPLGKEENNSG-----SMGHIYNDVFTVAVNMAGLPAISVPA 450 F LG SG + +++ FT N+ G PA+SVP Sbjct: 396 GELAAPRWQRTALQLILRFGLGGVLRRSGLVEQLAFDNLHRTPFTQLANLTGTPAMSVPW 455 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA--GYFRP 489 AL + +P+G+Q RE+ LF + +E+E G++RP Sbjct: 456 ALDDNGLPVGVQFGAAWGREDLLFQLATQLEQERPWGHWRP 496 >gi|110755253|ref|XP_392277.3| PREDICTED: fatty-acid amide hydrolase 2-like isoform 1 [Apis mellifera] Length = 536 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 121/510 (23%), Positives = 208/510 (40%), Gaps = 77/510 (15%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI---------IN 65 ++R++ + + E+V SYI I +N +E + A A+ D+ + I Sbjct: 64 KIRNRQLMSEEIVQSYIDRIREIQPVLNCMVEDRFEDALKEAKMCDEFLKSQNAPSPQIL 123 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + + G+P KDC + A + Y++ V + + D GA+ L N+ Sbjct: 124 AEKKPFFGVPFTTKDCIGVANMKQTAGLTVRKNIVSKYDAEVIRLMRDAGAIPLATTNVS 183 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E AM YG +P+ + + GGSSGG A IG+D GGSIR Sbjct: 184 ELAMWWETSNCLYGTTKNPYNT-----RHIVGGSSGGEGCIQAAAGSPLGIGSDIGGSIR 238 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA-----GIITRTVRDSAILLKAIAGYDE 240 P+ F G G KP+ G S G A S DQ G + R +D + +LK I Sbjct: 239 IPSYFNGIFGHKPSTGIVSNDGQYPSAQSEDQKRLLAIGPMCRYAQDLSPILK-ILADKN 297 Query: 241 CDATCVN-------------------LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI 281 D +N L E + ++++ + + K Y++ I Sbjct: 298 ADILRLNEKVDISKLKFYYMEDDGGQLLTSPVELEIKEAMRKVIRYLEKAYKVKVTKLNI 357 Query: 282 DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 K + W+ + K + Y +S NL ++ +++ + + Sbjct: 358 RKLKKSTALWMANMSCK------DEKDFT----YELSNRNGHINLW-WEFLKWTMFMSNH 406 Query: 342 DILEMYENTRSIGFGQ-EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQ 399 ++ + T F + VKH G+ D H ++ R L R+F + E Sbjct: 407 TLIALLTAT----FERFAVKH----GS--------DQHTKLIQESRELY-REFQDILGED 449 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 GV L PT PT+A PL E + +N +T +N+ GLPA + P L ++ +P+ Sbjct: 450 GV--FLFPTHPTAA-PLHHE-----PLVKAFNFSYTAIINVLGLPATACPLGLNKQGLPI 501 Query: 460 GLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 G+Q++G ++ +V + +E+ G + P Sbjct: 502 GIQIVGGLHQDRLTIAVAEELERGFGGWVP 531 >gi|55296951|dbj|BAD68427.1| putative amidase [Oryza sativa Japonica Group] Length = 503 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 122/445 (27%), Positives = 194/445 (43%), Gaps = 90/445 (20%) Query: 78 IKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGS 131 I+D AT+ ++T A S L G ++ V ++L GAV+LGK N+DE+A G+ Sbjct: 71 IEDNIATRDRLNTTAGSLALLGSVARRDAGVVRRLRRAGAVVLGKANLDEWANFRTIQGT 130 Query: 132 SNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 ++ G +P+ GSS GS+ A A + AA++GT+T GSI P+S Sbjct: 131 GGWSARGGQGRNPY-----VLSAAQCGSSTGSAIAAAANMAAATLGTETDGSILCPSSLN 185 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 VGIKPT G SR G++ +P D G I RTV D+ +L AI YD DA Sbjct: 186 SVVGIKPTVGLTSRAGVVPISPRQDTIGPICRTVADAVQVLDAIVSYDSRDAKATRAASK 245 Query: 248 -LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIVE--- 301 +P Y + L ++G +GIP + ++ S T+ + +QQ + ++ GA ++E Sbjct: 246 YIPPGGYVQFLKPDGLKGKRIGIPNGF-FNFPSGTVQQIVYQQLLDTVRKQGAVVIENLD 304 Query: 302 -ISLPHTQYAL-PAYYIISPAEASSNLARY---------------------DGVRYGLRV 338 +L Q L I+ PAE S+L Y + L+ Sbjct: 305 IANLTVIQDVLNNGQQIVLPAEFKSSLNTYLSDLSYSPVRSLAEIIAFNDAHPIEERLKD 364 Query: 339 EGKDILEMYENTRSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 G+ I + ENT IG + + H++ + L A + L+K Sbjct: 365 FGQLIFLVAENTTGIGALERAIIHQL--------------NKLSADGLEKLMK------- 403 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKM 457 ++ +D I+TP ND + + + G+PAI+VPA ++ + Sbjct: 404 DEQLDAIITP-----------------------NDSVSTVLAIGGMPAITVPAGYGKRGV 440 Query: 458 PLGLQLIGQPFREETLFSVGQIIEK 482 P G+ G E L + E+ Sbjct: 441 PFGICFGGLKGYEPRLIEMAYAFEQ 465 >gi|134292044|ref|YP_001115780.1| amidase [Burkholderia vietnamiensis G4] gi|134135201|gb|ABO56315.1| Amidase [Burkholderia vietnamiensis G4] Length = 509 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 127/453 (28%), Positives = 210/453 (46%), Gaps = 38/453 (8%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGI 78 +ISAVEL+D+ I IE N +NA ++AR A +D + G+A L G+P+GI Sbjct: 23 EISAVELLDACIARIETLNPYVNAITATSFERARREARAADAALARGNAVGVLHGLPVGI 82 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 KD T+G+ T S + P ++T+ ++L GA+++GK N+ E G+++ + Sbjct: 83 KDLEETEGLLTTYGSPLYRANIPAQDNTLVRRLRAAGAIVVGKTNVPEMGAGANSFNPVW 142 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +P+ + GGSSGGS+AA+A + + G+DTGGS+R PA+ G VG++ Sbjct: 143 GATGNPFDP-----RLNAGGSSGGSAAALALDMVPLASGSDTGGSLRIPAAKCGVVGLRT 197 Query: 199 TYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV-PDYERA 256 + G S + + P + G + RTV D+ + L A G D + ER Sbjct: 198 SPGLVPSDRKPLGWTP-IAVVGPMGRTVEDTWLQLAATVGQSGSDPLGYPCALDATMERR 256 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 + + VG +++ + + I +++ I+ L+ A I + Sbjct: 257 AHTDLATLRVGYTEDFGVCAVDDDIRAVFRRRIALLRGEVAVCEPIDVD----------- 305 Query: 317 ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYD 376 S A ++ R + GL+ + YE + G + +G + + C Sbjct: 306 FSGAHQCFDVLRAEAFVAGLQ-------KAYETNPDL-LGPNPRANYEMGINLGLADC-- 355 Query: 377 SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF----PLGKEENNSGSMGHIYND 432 +RA +T + R F F++ DVIL+PTTP S F P K N + Sbjct: 356 ---VRAHADQTRLFRRFQTLFDR-YDVILSPTTPVSPFRWTQPYLKSVNGIALENYYRWL 411 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 T V + PA+S+P + + MP GLQ+IG Sbjct: 412 SLTYVVTLTTNPAVSLPCGVDHRGMPFGLQMIG 444 >gi|288919818|ref|ZP_06414143.1| Amidase [Frankia sp. EUN1f] gi|288348826|gb|EFC83078.1| Amidase [Frankia sp. EUN1f] Length = 484 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 141/486 (29%), Positives = 227/486 (46%), Gaps = 55/486 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S+ ELV + ++ I+ + S +N++ + A A A ++D+R+ G+ L G+PI IKD Sbjct: 32 MSSQELVAASLERIQATASTLNSFRVLRADGALREAAQADRRLDAGERLPLLGVPIAIKD 91 Query: 81 CFATKGIHTQACSHILDGFRPHYES-TVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG 139 G+ T + F P E + +L +GA+++GK N EF E +G Sbjct: 92 DTDIAGLPTAFGAA--GDFPPATEDCEMVHRLRASGAIIVGKTNTPEFGQWPFTEGPAFG 149 Query: 140 PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPT 199 +PW ++D ++PGGSSGG++AAVA L A+IG+D GS+R PA++T VGIKP Sbjct: 150 STRNPW-NLD----YSPGGSSGGAAAAVAAGLVPAAIGSDGAGSVRIPAAWTHLVGIKPQ 204 Query: 200 YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQ 259 GR S + L G +TRTV D A+LL +AG D P+ + R+ ++ Sbjct: 205 RGRISSAPVTEQFNGLTTFGPLTRTVADGALLLDLLAGSLPVDRDRAAPPMESFVRSAER 264 Query: 260 SIQGMTVGIPKEYRLDY------LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + +G+ R+ Y L P + ++ L G ++V + P+ L Sbjct: 265 PPPRLRIGL--SLRIPYSGMPATLDPAVRSAVERLAEVLARLGHEVVPLDPPYGLLGL-- 320 Query: 314 YYIISPAEASSNLARYDGVR-YGLRVEGKDILE--MYENTRSIGFGQEVKHRIMIGTYVL 370 + P DG+R + RV +L+ N R+ G+ + R ++G Sbjct: 321 --LFLPRS-------MDGIRDWSRRVPDPGLLDPRTLTNARN---GRAL--RPLLGL--- 363 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENNSGSMG 427 +R ++ R I R F + VDV+L PTT P L + + Sbjct: 364 -TRAAEA------PARAYIGRVFRQ-----VDVLLAPTTAVPPPRVGELNRPTSWETDQA 411 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 I +T N+ G PAI+VPA L +P+G QL+G E L S+ +E ++ Sbjct: 412 IIAAAPYTWPWNVLGWPAINVPAGLTAAGLPVGAQLMGPAGGEGPLISLAAELEDVERWY 471 Query: 488 --RPHK 491 RP + Sbjct: 472 TRRPGR 477 >gi|170738797|ref|YP_001767452.1| amidase [Methylobacterium sp. 4-46] gi|168193071|gb|ACA15018.1| Amidase [Methylobacterium sp. 4-46] Length = 471 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 125/482 (25%), Positives = 211/482 (43%), Gaps = 61/482 (12%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R ++D+S VE+ ++ + +E + A ++ ++AR AA S+ R G+A L+G+ Sbjct: 16 RYAARDLSPVEVTEAVLARVEAMEPTLQALCLLLPEEAREAARASEARWRRGEALALDGV 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K+ AT+G+ + P E + +L + GA++ + M ++ M SS Sbjct: 76 PATVKENIATRGVAMPLGTAARRDAPPSPEDAPAAARLREAGAILFARTTMPDYGMLSSG 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +S + +PW D T TPGGSS G+ AA A +GTD GGSIR PA + G Sbjct: 136 LSSIHPLTRNPW---DPTR--TPGGSSAGAGAAAAAGYGPLHLGTDIGGSIRLPAGWCGI 190 Query: 194 VGIKPT----------YGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 VG+KP+ YGRC AG +TR+V D+A+ ++ ++ D D Sbjct: 191 VGLKPSNGRVPVDPPYYGRC--------------AGPMTRSVADAALAMRELSRPDHRDG 236 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAKIVEI 302 T + D+ ++ G+ PK RL L + G+ D A A ++E Sbjct: 237 TALPPAGLDW-----LALDGLD---PKGLRLGLLR-------EAGVGLPVDPAVAAVIED 281 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEVKH 361 + A ++P + L +G D IG E + Sbjct: 282 AAARLAAAGARVEPVAPFLTRAML------------DGLDTFWRERAWSDIGALAPERRA 329 Query: 362 RIM--IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 ++ I + ++R + A + RD + D +++P P AFP Sbjct: 330 AVLPFIRDWAQAARGSSGAAVFAGMSQMGAMRDAALRAIRPFDFLISPVAPIPAFPAELA 389 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 M + FTVA NM+ PA++VP L + +P+GLQ++G F + + + ++ Sbjct: 390 SPTDDPMRPFEHIGFTVAFNMSEQPAVAVPVGLTPEGLPVGLQIVGHRFDDLGVLRLARV 449 Query: 480 IE 481 E Sbjct: 450 FE 451 >gi|229494738|ref|ZP_04388496.1| putative glutamyl-tRNA [Rhodococcus erythropolis SK121] gi|229318405|gb|EEN84268.1| putative glutamyl-tRNA [Rhodococcus erythropolis SK121] Length = 463 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 127/494 (25%), Positives = 208/494 (42%), Gaps = 77/494 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 +RS SA +V+ ++ ++ N ++NA + V A++AR AA+ D+R + G+ L G+ Sbjct: 18 VRSGQASARTIVEDHLARVDECNDELNALVTVCAEEARTAADALDERRLLGETLGPLAGV 77 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD AT G+ T A S L P ++ GA+++GK N EF Sbjct: 78 PFTVKDLIATAGVRTTAGSRTLADNVPAVDAPAVAAFKAAGAILIGKTNTPEFGACGLTR 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G SP R D + G S G S++ AG + +GTD GGS+R PA TG Sbjct: 138 NELFGTTASPVRP-DGVVRSPGGSSGGESASVAAG-MSVLGLGTDFGGSVRWPAHCTGLT 195 Query: 195 GIKPTYGRC----SRLGIIS----------FAPSLDQAGIITRTVRDSAILLKAIA---- 236 ++PT GR G++S ++ G + R + D+A+ L+ ++ Sbjct: 196 SVRPTLGRVDPEGQYPGVLSDGRVLANPATMHGTIQTIGPLARNLGDAALALRVLSMPHF 255 Query: 237 GYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 + E D+ V++ D A + T+ + +E R + Sbjct: 256 SWSEPDS--VDVDDLDIRWATGEG----TIPVDEEIR---------------------SA 288 Query: 297 AKIVEISLPHTQY---ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + V ISL ++Y ALP R + + LR +E + + S+ Sbjct: 289 VRTVAISLDASEYDGLALP---------------RANALFGALRS-----VETHADIYSL 328 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRAR-KIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 G I + + R S + A R ++ +F E G +IL P Sbjct: 329 AAGSAHAFDADITAMLAAGRDRSSAEVEALWADRAVLISEFLG--EMGDALIL-PVASVL 385 Query: 413 AFPLGKEENNSGSMGHIYNDVFTV--AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 A PLG E G + D A+++ GLP++ VP L +P+G+Q++ +PF E Sbjct: 386 APPLGVESFEVGGRKLTWMDALASCRAISVLGLPSVVVPVGLSRNGLPVGVQVVARPFHE 445 Query: 471 ETLFSVGQIIEKEA 484 SV I A Sbjct: 446 HVALSVAARITSNA 459 >gi|114053443|gb|AAK91896.2|AC091627_9 Amidase family protein [Solanum demissum] Length = 477 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 136/522 (26%), Positives = 215/522 (41%), Gaps = 100/522 (19%) Query: 7 MAVSESRDRLRSKDISAVEL-VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 + +S ++ +K S E +D +A + +N + + Q+ +A A +S R Sbjct: 11 LILSNFSNKTEAKTFSFKETTIDDIHKAFKQNNLHQDNLLNKADQERKANAPKSLSR--- 67 Query: 66 GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 L GIP+ +KD ATK ++T A S L G ++ V +KL + GA++LGK M Sbjct: 68 -----LHGIPVLVKDNIATKDKLNTTAGSLALVGSIVPQDAGVVKKLRNVGAIILGKATM 122 Query: 125 DEFAMGSSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A + G + P+ + S D P GSS GS+ +VA + A ++GT+ Sbjct: 123 TEWAASRATNLPNGWNGRLGQALDPY--VASAD---PSGSSTGSATSVAANMAAVALGTE 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P++ VGIKPT G SR G+I + D G I RTV D+ +L I G+D Sbjct: 178 TSGSILSPSNANSVVGIKPTVGLTSRAGVIPISHRQDTVGPICRTVTDAVEVLDVIVGFD 237 Query: 240 ECDATCVN-----LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D +P Y + L ++ +GI K D+ KT+QQ + L+ Sbjct: 238 RDDFPATKKASTYIPHGGYRQFLKADGLRDKRLGISK----DFFGSNDIKTYQQHFNTLR 293 Query: 294 DAGAKIVE-ISLPHTQYALPAY----YIISPAEASSNLARY-------------DGVRYG 335 GA IV+ + +P+T A I AE +L Y D + + Sbjct: 294 QKGAVIVDNLVIPYTDLVNNAIDVAQNIALSAEFKMDLNAYLKHLVHTQVRSLADVIAFN 353 Query: 336 -------LRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 L+ G+DI+ E T IG +++ + R I Sbjct: 354 KISPPEKLKEYGQDIMLEAEKTNGIG---KLEREAL------------------RNITKA 392 Query: 389 IKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 K F + E +D +++P + GH+ + G P I+ Sbjct: 393 CKYGFEKMMKENKIDALMSPGADIA--------------GHLA---------IGGYPGIN 429 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VPA + P G+ G E TL + E+ +P Sbjct: 430 VPAGYDKTGTPFGISFGGLKGSEPTLIEIAYGFEQATHIRKP 471 >gi|39944808|ref|XP_361941.1| hypothetical protein MGG_04386 [Magnaporthe oryzae 70-15] gi|145021572|gb|EDK05701.1| hypothetical protein MGG_04386 [Magnaporthe oryzae 70-15] Length = 1854 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 112/462 (24%), Positives = 179/462 (38%), Gaps = 69/462 (14%) Query: 35 ENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 + +Q NA+I + + + R E + NG L G+P KD G T A Sbjct: 39 KEHKAQSNAWISLATEDSIRQQWEAAKAAKANGADVPLFGVPFAAKDNIDAIGFPTTAAC 98 Query: 94 HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV---ISPWRSMDS 150 ++TV +L GA+++GK N+D+FA G S YG V P R Sbjct: 99 PAFSNGPVDTDATVISRLKGAGAILIGKTNLDQFATGLVGTRSPYGAVPNTFDPERVSGG 158 Query: 151 TDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIIS 210 + + + G+ S+GTDT GS R PA +G+KPT G S G++ Sbjct: 159 SSSGSAVVVARGT--------VPFSLGTDTAGSGRVPAGLNNIIGLKPTRGAISTTGVLP 210 Query: 211 FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 +LD I TV D+ +L G+D D+ P E + +S+ P Sbjct: 211 ACRTLDCVSIFALTVDDAQEVLAVAEGHDPSDSYSRPRPSLTIEPTISKSLTFAICKDPN 270 Query: 271 EY----RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNL 326 + R+ +D+ GI+ + + E++ Sbjct: 271 WFGAADRVLAYDAALDRVRDSGIALEPVDFSDLFELA----------------------- 307 Query: 327 ARYDGVRYGLRVEGKDILEMYENTRSI------GFGQEVKHRIMIGTYVLSSRCYDSHYL 380 L EG + E Y RS+ V+ I+ ++ +D+ Y Sbjct: 308 --------SLLYEGPWVAERYAAIRSLIEQDPAVLDPTVRSIILKANGFSAADLFDAQYR 359 Query: 381 RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP----LGKEENNSGSMGHIYNDVFTV 436 R + L+K+ A D IL PT PT FP + +E S+ Y + Sbjct: 360 R----QYLVKK--IAAVYAKYDAILVPTAPT--FPRLQDVAREPVRENSLLGTYTNF--- 408 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 VN A+S+PA C +++P G+ LI ++E L S+ + Sbjct: 409 -VNFMDWSALSIPAGFCTQELPFGITLISNTWQEPKLISLAK 449 >gi|27529830|dbj|BAC53930.1| amidase-like protein [Nicotiana tabacum] Length = 542 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 24/306 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ FM++ E L+ K I++ EL ++ ++ + + I + + A A+E+D+ Sbjct: 81 DIAFMSILELGQLLKEKLITSAELTGIFLDRLQRYGPVLESVITITEELAYQQAKEADQL 140 Query: 63 IINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G L GIP G+KD A T S E+ V ++L GAV++ K Sbjct: 141 LSKGKYLGPLHGIPYGLKDIIAVPNYPTTWGSKSFKDQVLDLEAWVYKRLKSAGAVLVAK 200 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L A ++ + G +PW + ++F+ G S+G +S G + A IG++T Sbjct: 201 LVAGSLAY---DDIWFGGRTRNPW----NMEEFSTGSSAGPASCTSTGIVPFA-IGSETV 252 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI PA+ G ++PT+G R G++S + SLD+ G R+ D A++L AI G D Sbjct: 253 GSITYPAARCGVTALRPTFGAVGRTGVMSISESLDKLGPFCRSAADCAVVLDAILGKDPD 312 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 D + ++ + D I +TVG YL + ++ ++ L+ GAK+V Sbjct: 313 DLSSRDIALVD---PFSVDITKLTVG--------YL----EDADKEVVNVLQSKGAKMVP 357 Query: 302 ISLPHT 307 L +T Sbjct: 358 FDLKYT 363 >gi|27378025|ref|NP_769554.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27351171|dbj|BAC48179.1| bll2914 [Bradyrhizobium japonicum USDA 110] Length = 412 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 106/424 (25%), Positives = 177/424 (41%), Gaps = 52/424 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ IKD G+ S I P + + L NGAV+ K N EF G Sbjct: 11 LAGLPVPIKDLTDVAGVLNTQGSPIFKDNIPAKSDLMVENLETNGAVVYAKSNTPEFGAG 70 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ +G ++PW T K G S G + A G A G+D GGS+R PA+F Sbjct: 71 ANTFNEVFGATLNPW----DTSKSAAGSSGGAAVALATGMAWLAQ-GSDMGGSLRSPAAF 125 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG++P+ GR + + +L G + R V D A+LL A++G D + P Sbjct: 126 CGVVGMRPSIGRVAHTPKSAIDRNLGVVGPMARNVEDLALLLDAMSGDYADDPLSLPAPA 185 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + A + + + + + P + ++ +AGA IVE + P + A Sbjct: 186 TSFLSATQAGKKPKRIAYSPDLGITPVDPEVKAITRKAAERFAEAGA-IVEEAHPDWREA 244 Query: 311 LPAYYIISP---AEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 ++++ A +NL R +D+L+ EV I G Sbjct: 245 HECFHVLRAFDFAITKANLLRTK----------RDLLK-----------PEVIWNIEEGL 283 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL---------GK 418 + RA R + E F+ D++L PTT FP+ GK Sbjct: 284 -----KLTVEQLARAEAQRVGMTARAVEFFKT-YDLLLVPTTIVPPFPIEDRYVAECAGK 337 Query: 419 EENNSGS-MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 +N +G +Y A+ +A P++S+P +P+G+Q++G P + + + Sbjct: 338 RFDNYVEWLGIVY------AITLACCPSLSLPCGFTASGLPVGVQVVGAPRADAQVLAGA 391 Query: 478 QIIE 481 +++E Sbjct: 392 KVLE 395 >gi|148553850|ref|YP_001261432.1| amidase [Sphingomonas wittichii RW1] gi|148499040|gb|ABQ67294.1| Amidase [Sphingomonas wittichii RW1] Length = 472 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 127/494 (25%), Positives = 198/494 (40%), Gaps = 79/494 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R +S E+ + A+E N +NA IE + A D G+P Sbjct: 18 IRGGAVSRDEVKAAATAAVERLNPSLNAVIETFDDEPTA------------DDGVFAGVP 65 Query: 76 IGIKD-CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD +G + S G R ++ + ++ G V +G+ N EF G + E Sbjct: 66 FLVKDLVLHRRGGLVEMGSRFARGLRTPGDTFLMERFRAAGLVAIGRTNTPEFGHGCTTE 125 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 GP +PW SSGGS+AAVA + + G D GS+R PA+ G Sbjct: 126 PVANGPTRNPWNPAHMAGG-----SSGGSAAAVAAGMVPIAHGNDGAGSLRNPAACCGVF 180 Query: 195 GIKPTYGRCSRLGIISFAPSLDQA-------GIITRTVRDSAILLKAIAGYDECDATCVN 247 +KP+ GR I+ P A G+++R+VRDSA L A+AG D + Sbjct: 181 ALKPSRGR------ITLGPDSGDALFGMGCEGVLSRSVRDSAAALDAVAGPAAGDPYVIA 234 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P Y + +D+ + + + D S + +W A++ E H Sbjct: 235 PPHAPYRQEVDRDPPPLRIAV----TTDAWSGAPVGEESRAATW---QAARLCEALGHHV 287 Query: 308 QYALPAYYIIS------PAEASSNLARYDGV-RYGLRVEGKDILE-----MYENTRSIGF 355 + A PA+ A A+ ++ DG+ RV G D LE +Y + +++ Sbjct: 288 EEARPAFDYAEYRRANIDAWAAGMVSWVDGLAAINGRVPGDDNLEAATLAIYRHGKALSA 347 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+ L + I R + FE D++LTP T T A P Sbjct: 348 GE---------------------LLAVPAVMNRISRAVGDFFET-YDLLLTPVTATPAAP 385 Query: 416 LGK-EENNSGSMGHIYND------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 LG ++N G + D F N+ G PA+SVP +PLG+Q Sbjct: 386 LGTYDQNAPGITPERWFDHKGSFTPFLALFNLTGQPAMSVPLCQSADGLPLGVQFAAGFG 445 Query: 469 REETLFSVGQIIEK 482 RE+ LF + +E+ Sbjct: 446 REDLLFRLAGQLER 459 >gi|239813834|ref|YP_002942744.1| Amidase [Variovorax paradoxus S110] gi|239800411|gb|ACS17478.1| Amidase [Variovorax paradoxus S110] Length = 480 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 122/498 (24%), Positives = 210/498 (42%), Gaps = 48/498 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKR 62 L+ A SR R+ ++ +S EL+ + + IE N + NA + + A A E D Sbjct: 7 LDLCATELSR-RIAARSVSCHELMQASLARIEALNPRFNAIVSLREPGVLLAEARERDAE 65 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+ R + G P+ +KD G+ T S + +S ++ GA+++GK Sbjct: 66 LARGERRGWMHGFPLAVKDLSHAAGLPTSMGSPLSPRSPARIDSLHVARMRAAGAIVIGK 125 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N EF +GS + +G R+ + ++ G S G + A G L A G+D Sbjct: 126 TNTPEFGLGSHTYNTVFGIT----RNAYAPERSAGGSSGGAAVALALGMLPVAD-GSDMM 180 Query: 182 GSIRQPASFTGTVGIKPTYGRC-----SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GS+R PA+F +G++P+ GR L F L G + RTV D+A LL A Sbjct: 181 GSLRNPAAFNNVIGMRPSRGRVPGDPEQEL----FFQQLGTEGPMGRTVEDTARLLAVQA 236 Query: 237 GYDECDATCVNLPVPDYER-ALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKD 294 G+D +P + ALD +G+ +G + + L+P I + +Q + + Sbjct: 237 GFDARVPLSSPQALPSADAIALDGDGKGLRIGWLGSLWPGLPLAPGIRELGEQALGTFRT 296 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G ++ +L P E N + + +R L V GK + + Sbjct: 297 IGCEVEPCTLD------------VPRE--HNWSAWLRLRQ-LLVGGKLGAYLSDPQLFAQ 341 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 E + I ++ ++ Y + R+ + R F FE+ D +L PT F Sbjct: 342 LKPEAQWEIEQSRHLDAASLYQASLYRSN-----VYRAFFRLFER-FDFVLAPT--AQVF 393 Query: 415 PLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P E + + + +D + +AGLP ++V A E +P+GLQL G Sbjct: 394 PFDAELHWPAEVAGVPSDTYHRWMEIVTPFTLAGLPTLNVRAGFGEGGLPMGLQLAGPIH 453 Query: 469 REETLFSVGQIIEKEAGY 486 + + +G ++ G+ Sbjct: 454 ADLDVLRLGHAYDQACGW 471 >gi|251782587|ref|YP_002996890.1| amidase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391217|dbj|BAH81676.1| amidase family protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 484 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 135/504 (26%), Positives = 237/504 (47%), Gaps = 79/504 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ +I+ +ELV I + N +NA + +++ AA EE+ +R +G G+P Sbjct: 13 VQTGEITPLELVSQAIHKAKELNPTLNA---ITSERFEAALEEAKQRDFSG--LPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD KG + + S + ++ ++L G ++LG+ N EF + ++ Sbjct: 68 LFLKDLGQELKGHSSTSGSRLFKEYQATKTDLFVKRLEALGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SSLHGPVNLP---KDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+ + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKDSIYQSLQRPLTIAFYQ--RLSDGSPVSLDTAKALKQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + + YYI++ E ++ A + +G R KD +E Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFADIEDT-FG-RPMTKDDMETM----------------- 335 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKEE 420 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 336 --TWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGELV 391 Query: 421 NNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKKM 457 +S M ++ +N V +T N+ G PAIS+P ++ + Sbjct: 392 PDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEGL 451 Query: 458 PLGLQLIGQPFREETLFSVGQIIE 481 P+G+QLI RE+ L + + E Sbjct: 452 PMGIQLIAAKGREDLLLGIAEQFE 475 >gi|332528630|ref|ZP_08404612.1| amidase [Hylemonella gracilis ATCC 19624] gi|332041946|gb|EGI78290.1| amidase [Hylemonella gracilis ATCC 19624] Length = 543 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 113/414 (27%), Positives = 179/414 (43%), Gaps = 54/414 (13%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD G+ T A + P +TV QKL D GA + GK N+D+FA G + Sbjct: 3 FAVKDNIDAAGLPTTAACAAF-AYSPQAHATVVQKLLDAGASLAGKTNLDQFACGLNGTR 61 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA----SIGTDTGGSIRQPASFT 191 S PW ++ + F P SGGSS+ A + ++GTDT GS R PA Sbjct: 62 S-------PWGAV--PNAFDPAYVSGGSSSGSAHVVAKGQVDFALGTDTAGSGRVPAGLN 112 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 VG+KP+ G S G++ A S+D I R+V +A +L A GYD D L + Sbjct: 113 NIVGLKPSKGLISARGVVPAAQSVDCVSIFARSVGLAAQVLAAARGYDPADPYSRTLTLA 172 Query: 252 DYERALDQSIQGMTVGIPKEYRL--DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 D R ++ + G+P D L+ + +++ + L++ G VE+ + + Sbjct: 173 D--RPFPKTFR---FGVPDALAFFGDRLA---EAEFERARAGLRELGG--VEVRFAYQPF 222 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 AEA++ L E + E Y R E + + Sbjct: 223 ----------AEAAA-----------LLYESALVAERYAAIRDFFDAHEAAVMEPVRGII 261 Query: 370 LSSRCYDSHYL-----RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 R YD+ L R R + + EA QG+DV+L PT PT + + + + + Sbjct: 262 AQGRSYDAADLCIAQTRLRALGQQAAAQWREAGGQGMDVMLVPTAPTH-YTIAQMQADPV 320 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 ++ +T VN+ A+SVP+++ +P G+ LIG + L +GQ Sbjct: 321 ALNRNLG-AYTNFVNLLDYAALSVPSSIRPDGLPFGITLIGPCGSDWQLAELGQ 373 >gi|194904169|ref|XP_001981014.1| GG23111 [Drosophila erecta] gi|190652717|gb|EDV49972.1| GG23111 [Drosophila erecta] Length = 536 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 128/522 (24%), Positives = 221/522 (42%), Gaps = 69/522 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++V E R RL+S+ +++VELV +YI+ IE+ N +NA +E A A E+D Sbjct: 42 SRLLTLSVQELRRRLQSRQLTSVELVRTYIERIESVNKHLNALVESRFTAALEEASETDD 101 Query: 62 RIINGDA----------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 I + + R L G+P+ +K+ A +G+ S + H + ++L Sbjct: 102 LIASCQSVADVEKLFQERPLLGLPVTVKESCALEGMTFAVGSLSRKNVKAHADGEAVKRL 161 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS-GGSSAAVAGF 170 GA+ L E+ +T G ++P+ S + + G S G+ A++ G Sbjct: 162 KSAGAIPLLVSATPEYCFSIETDTLLNGRCLNPYDSERTPGGSSGGEGSLNGAGASLFG- 220 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-------AGIITR 223 IG+D GGSIR P+ + G G KP+ S G F S D G I+R Sbjct: 221 -----IGSDIGGSIRIPSLYCGIFGHKPSGSVFSAKG--HFPNSTDPNIGHYFVEGPISR 273 Query: 224 TVRDSAILLKAIAGYDECDATCVNLPVP------DYERALDQSIQGMTVGIPKEYRLDYL 277 D + LL+ +AG + +N P+ Y + M V + K+ R Sbjct: 274 FAEDLSELLQIMAGKENASKLRLNEPIQLKQIKVQYALGFEGFNGWMHVAVDKDIR---- 329 Query: 278 SPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLR 337 + + + LK G + + LP+ + ++ A S + D + Y L Sbjct: 330 -----NSICRATTHLKTLGLDVQKAKLPNLKNSMEM--------ALSGITVQDLMDYLLP 376 Query: 338 VE-----GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI--K 390 E GK ++E +S+ + +I + L+ R ++ K+ + Sbjct: 377 DENPEGSGKVRETLWEIVKSLRGHSKYTTNALI--FELTRRT--GAFMSESKLTQYMMEA 432 Query: 391 RDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 R+ FE + V+L PT A + S+ ++ +T+ N+ GLP Sbjct: 433 RELIGEFENLLGDNGVLLFPTLNLPA------PRHKWSILSLWGVDYTLLFNVLGLPVTH 486 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VP L E+ +P+GL +IG P ++ V +E+ G ++P Sbjct: 487 VPMGLNERGLPVGLSVIGAPNQDRLCLRVAVELERAFGGWKP 528 >gi|254773632|ref|ZP_05215148.1| hypothetical protein MaviaA2_03005 [Mycobacterium avium subsp. avium ATCC 25291] Length = 498 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 132/514 (25%), Positives = 216/514 (42%), Gaps = 86/514 (16%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 K ++ EL+ Q + N ++NA +V + A ++ ++G G+P + Sbjct: 21 KQVTPAELLALARQRADAVNPRLNA---IVCRLDDVADRQAADPNLSGP---FAGVPFLL 74 Query: 79 KDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD +G T S L + VTQ+ D G V+ GK N EF E Y Sbjct: 75 KDLGQEYRGFPTSCGSRSLANDVADRHALVTQRFLDAGLVIFGKTNTPEFGAKGVTEPDY 134 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +GP +PW + + TPGGSSGGS AAVA + A+ D GGSIR PA+ G VG+K Sbjct: 135 WGPARNPWDT-----ERTPGGSSGGSGAAVAAGIVPAAGANDGGGSIRIPAACNGLVGLK 189 Query: 198 PTYGRCSRLGIISFAPS-------LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 P+ G+ + P + G++TRTVRDSA LL +I G+ + V LP Sbjct: 190 PSR------GLAPYGPQTGELMLGMATQGVVTRTVRDSAALLDSIIGHHPDASYRVALPD 243 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK----TWQQGISWLKDAGAKIVEISLPH 306 + + + + +T+G L+P D+ + + L + G ++ E++ P+ Sbjct: 244 KPFAEQITRPPRPLTIGYSAR---SALNPRPDREAVAAVENSAALLSELGHRVREVAPPY 300 Query: 307 TQYALPAYYII----SPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 AL ++ + +++ R G R E D L + E RS G Sbjct: 301 DDAALGRDFLTIWFAQLHQQVADIRRRTGARDN-DFEA-DTLAISELGRSGGV------- 351 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 V+S+ + Y+++ AF +G D LTPT T +G + Sbjct: 352 ----LPVMSALENRNTYIQS-----------LAAFHEGYDFFLTPTLATPPLVVGATSTS 396 Query: 423 SG-----------------SMGHIYNDV---------FTVAVNMAGLPAISVPAALCEKK 456 + + I +D+ +T + G PAISVP + Sbjct: 397 AALQRAARLVSRVRGGKLMRLSGILDDLIRESLGWVPYTQLAILTGRPAISVPLHWTDDG 456 Query: 457 MPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPH 490 +PLG+Q +G+ + L + +E+ + + H Sbjct: 457 LPLGVQFVGKLGADGDLLQLAAQLEQARPWAQRH 490 >gi|326481981|gb|EGE05991.1| amidase [Trichophyton equinum CBS 127.97] Length = 598 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 117/484 (24%), Positives = 213/484 (44%), Gaps = 46/484 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK----ARAAAEESD 60 ++ ++ R+ ++ ++ +V++ + AI S + E +Q RA+AE + Sbjct: 108 DYYTSADYRELYKTGKLTPTAVVEALLPAIRRDTSPPGEFSEGFSQSKIDLVRASAEAAT 167 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R NG ++GIP+ IKD G S + P + S +K + GA+++ Sbjct: 168 QRWANGTPLGPMDGIPVAIKDEVDIDGYDKYLSSKVNFTANPSFTSWCVKKWEEAGAIVI 227 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N PV+ R+ + +T G S G A AG + A +G D Sbjct: 228 GKTVMHEIGLDTTNNN----PVVGTPRNPHNPGYYTGGSSGGSGYAVGAGIVPLA-LGAD 282 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A ++ G + + D A+ + ++ D Sbjct: 283 GGGSIRIPSNYCGIYGLKTTHGRVSAAPTRRLATTVGVFGPMASNIDDLAMGYRIMSAPD 342 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAK 298 + P P S +G +G+ K++ ++ +P + + + I + +D G + Sbjct: 343 PNNPVSAAFPDPLLSVPSPSSSRGKVIGVYKDW-VERSNPDVLAMFNKAIDYYRDEQGYE 401 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 I++I++P+ + + E SS L + K I ++ TR Sbjct: 402 IIDITIPYIPEGGKCHALSILNEISSGLTK------------KQISQLSAPTR------- 442 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPL 416 I V ++ Y ++++R L+ + F++ G+ VI TPTTPT+ + Sbjct: 443 ------IVVSVGGTQGLAQDYFASQRMRHLLMNHLSFLFQKYPGL-VIATPTTPTAGSKI 495 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 E + S S + + + N G PAIS P E +P+GL +G+ E Sbjct: 496 SGGEADLTNGISDSNATLQSMEYVYLANFTGCPAISCPMGYDDEPSVPVGLMGMGEWGSE 555 Query: 471 ETLF 474 E L Sbjct: 556 EALM 559 >gi|166367336|ref|YP_001659609.1| amidase [Microcystis aeruginosa NIES-843] gi|166089709|dbj|BAG04417.1| amidase [Microcystis aeruginosa NIES-843] Length = 465 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 128/486 (26%), Positives = 205/486 (42%), Gaps = 59/486 (12%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA----EESDKRIING 66 E +R+K IS +EL Y+ IE + Q+ +++ V + A A A E+ + Sbjct: 12 ELAQLIRTKQISPLELTHLYLDRIEKFDCQIGSFVHVARESALATAGAQTEQLSQIAATA 71 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + G+P IKD A G+ L G Y+ + ++ G ++LGK + Sbjct: 72 ELPPFFGVPTAIKDLNAVAGMPVSYGIAALQGNIAQYDEGIVTRIKMAGFILLGKTATSQ 131 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 E + P +P+ +T GGSSGG++AAVA C + G+D GGSIR Sbjct: 132 LGSFPYTENLGFLPTRNPFNR-----DYTAGGSSGGAAAAVAAGFCPIAQGSDGGGSIRT 186 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PA G VGIKP+ GR S + F + G +++TV D A LL I+GY D Sbjct: 187 PAGCCGLVGIKPSRGRVSYAPVGEFQSGIATNGTLSKTVADGAALLTVISGYTTGDPYW- 245 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 LP P + +L T Q+G+ L+ A + + P Sbjct: 246 -LPDPPF---------------------SFLEAT-----QRGVKPLRIAFSTSIS---PF 275 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI---GFGQEVKHRI 363 + A A Y + E + L +G+ + L D+ + R I G R Sbjct: 276 GEAA--AVYKNAVIETAKIL---EGMGHHLTEYSPDLQALIAPFRRIWQAGTAAAAIPRE 330 Query: 364 M---IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 + + ++L + YL+A + +I R F+ DV+L P P G E Sbjct: 331 LLSPLNQWLLDNSGSAGEYLQAVRQMHVISRQIVAMFDN-FDVLLLPIFLHQ--PPGIAE 387 Query: 421 NNSGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + N + + N +GLPAI++P + + +P+ +QL+G+P E TL Sbjct: 388 WENLPPEEAVNKMISWIAPSPIANASGLPAIALPTGVDSQGLPVAIQLVGKPADEITLLG 447 Query: 476 VGQIIE 481 + +E Sbjct: 448 LSAQLE 453 >gi|260574463|ref|ZP_05842467.1| Amidase [Rhodobacter sp. SW2] gi|259023359|gb|EEW26651.1| Amidase [Rhodobacter sp. SW2] Length = 445 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 120/232 (51%), Gaps = 6/232 (2%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPI 76 + +I VEL +++++AI Y +AR+AA + +R+ G+ L +G+P+ Sbjct: 19 AGEIHPVELTEAFLEAIAAHPLGPRIYARTSPDRARSAAMAAARRVKEGNRIGLLDGVPL 78 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 KD F + G+ T+A S +L G P ++ V + G V LGK +M E A Sbjct: 79 SWKDLFDSAGVATEAGSALLAGRVPARDAEVLEVASLQGLVCLGKTHMSELAFSGLG--- 135 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 PV + ++ GGSS G++ +VA L A+IG+DTGGS+R PA++ VG+ Sbjct: 136 -LNPVTATPPCVNDAAAVA-GGSSSGAATSVAFGLAPAAIGSDTGGSVRIPAAWNDLVGL 193 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 K T+GR S G++ D G + R V D A+LL A+ G D T +L Sbjct: 194 KTTHGRLSLQGVVPLCEKFDTVGPLARNVEDCALLLGALEGRRAADLTGASL 245 >gi|198418044|ref|XP_002120536.1| PREDICTED: similar to Glutamyl-tRNA(Gln) amidotransferase subunit A homolog (Glutaminyl-tRNA synthase-like protein 1), partial [Ciona intestinalis] Length = 170 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 17/160 (10%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 R+ SKD+ A E I+ I+ +NA+I VV +D L Sbjct: 19 RNGAISKDVVARECY-KRIEEIK----PLNAFITVVDDHTNKNHGSTD--------LPLH 65 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 G+P +KD F+T G+ T S++L + P + +TV +L GAVM+GK NMDEFAMGS Sbjct: 66 GVPFAVKDNFSTVGVRTTCASNMLKDYVPTFNATVVDRLLKAGAVMMGKTNMDEFAMGSG 125 Query: 133 NETSYYGPVISPW----RSMDSTDKFTPGGSSGGSSAAVA 168 + S +GPV SPW + D++D F GGSSGGS+ AVA Sbjct: 126 SVNSLFGPVRSPWLYDFNNTDNSDWFICGGSSGGSAVAVA 165 >gi|260462466|ref|ZP_05810673.1| allophanate hydrolase [Mesorhizobium opportunistum WSM2075] gi|259031662|gb|EEW32931.1| allophanate hydrolase [Mesorhizobium opportunistum WSM2075] Length = 614 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 109/406 (26%), Positives = 174/406 (42%), Gaps = 54/406 (13%) Query: 69 RDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 + L GIP +KD G+ T AC + P ++TV +L GA+++GK N+D+F Sbjct: 65 KPLWGIPFAVKDNIDVAGMPTTAACPEYT--YWPEKDATVVARLKAAGALVVGKTNLDQF 122 Query: 128 AMGSSNETSYYGPVISPW----RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 A G V +PW ++D + PGGSS GS+ A A + A ++GTDT GS Sbjct: 123 ATGLVG-------VRTPWPIPRNAID--EALVPGGSSSGSAVATARGIVAFALGTDTAGS 173 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PA VG+KPT G S G++ +LD + TV D+ + + D D Sbjct: 174 GRIPAGLNNIVGLKPTVGALSAAGVVPACRTLDCVSVFALTVDDAYRVFSVASARDAADP 233 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEI 302 ++ V R Q + +TVG+P + L++ T + ++ ++ L G ++VEI Sbjct: 234 YSRDIAVQPLAR--RQPV--LTVGVPAKADLEFFGDTAMQAGFEASLAMLSRLGCRLVEI 289 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 +Y A++NL Y+G R +D +E E V Sbjct: 290 PFGD-------FY------ATANL-LYEGAWVAERYAAIRDFMEANEAAL-----HPVTR 330 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP---TSAFPLGK 418 +I+ G LS+ + R K VD+ PT P T+A L Sbjct: 331 KIIGGARNLSA----ADAFRGLYALQAYKAKLAPVIAS-VDLFCVPTAPTHYTTATVLAD 385 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 + +G +T VN+ + I+VP +P+ + L+ Sbjct: 386 PVETNSRLG-----TYTNFVNLLDMCGIAVPTGKRGDGLPMSVTLL 426 >gi|169783086|ref|XP_001826005.1| amidase [Aspergillus oryzae RIB40] gi|83774749|dbj|BAE64872.1| unnamed protein product [Aspergillus oryzae] Length = 590 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 142/524 (27%), Positives = 220/524 (41%), Gaps = 73/524 (13%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L ++ +++L + ++++VEL+ Y++ I + +NA ++V + A ++R Sbjct: 66 KLEEASIDAIQEQLGAGNLTSVELLQCYLERIHQTQPYLNAILQVNPDAFKIAKALDEER 125 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP +KD A+K + T A S L G +S V L GA++LGK Sbjct: 126 AQGKSRGPLHGIPFIVKDNIASKDRLETTAGSWALLGSVVPRDSYVVHGLRKAGALLLGK 185 Query: 122 LNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + E+A M S+N + + RS + PGGSS GS V L ++GT+T Sbjct: 186 AALSEWADMRSNNYSEGFSARGGQCRSAYNL-TVNPGGSSSGSGVGVGANLIPFALGTET 244 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+ PA VGIKPT G SR G+I + D G +TVRD+ L AI G D Sbjct: 245 DGSVINPAQRNSVVGIKPTVGLTSRAGVIPESLHQDTVGTFGKTVRDAVYALDAIYGIDA 304 Query: 241 CDATCV----NLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQ--QGISWL 292 D + P Y + L +++G T GIP ++ + D+ Q + + + Sbjct: 305 RDNYTLAQKGKTPEGGYAQFLTNKTALKGATFGIP--WKSFWALGDEDQISQLLELVDLI 362 Query: 293 KDAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLARYDGVRYGLRVEGKD 342 K AGA ++ LPH + I+SP +N + Y ++ KD Sbjct: 363 KQAGATVINGTELPHYK------TIVSPDGFNWDYGSTRGYANESEYSYIKVDFYNNLKD 416 Query: 343 ILEMYENTR-----------SIGFGQEVKHRIMIGTY----------VLSSRCYDSHYLR 381 L ENT+ +G E + + + + S D Y + Sbjct: 417 YLSEVENTKVKSVEDLVQYYQDNYGSEGGYPSIHPAFGSGQDGLIASLESKGIMDETYYQ 476 Query: 382 ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDV---FTVAV 438 A + R E+G+D L K +N + + DV VA Sbjct: 477 ALEFCQRTTR------EEGIDAAL------------KYKNRTLDGLLVPPDVAQSIQVAA 518 Query: 439 NMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 AG P I+VPA + E MP GL ++ F E TL IE Sbjct: 519 Q-AGYPVITVPAGVGKESGMPFGLAIMNTAFSEPTLIKYASAIE 561 >gi|169765852|ref|XP_001817397.1| general amidase-B [Aspergillus oryzae RIB40] gi|83765252|dbj|BAE55395.1| unnamed protein product [Aspergillus oryzae] Length = 541 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 129/512 (25%), Positives = 219/512 (42%), Gaps = 89/512 (17%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK--RIINGDARD 70 RD+L +++++AVE+ ++ + + + E + +A A A+E D+ + Sbjct: 68 RDKLAARELTAVEVTTAFCKRAAIAQQVTSCLTETMFPQALARAKELDEYLQTTGKPMGP 127 Query: 71 LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +K+ F +G+H+ LD + S + + L GAV+ K N+ + M Sbjct: 128 LHGVPISLKETFNVQGVHSSLGLVSFLDRPEASHNSALVEILLAAGAVLYVKTNVPQTMM 187 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + +E + +G V++P R T GGSSGG A +A IGTD GSIR PA Sbjct: 188 TADSENNVFGRVLNPHRR-----NITAGGSSGGEGALIALRGSLLGIGTDIAGSIRIPAL 242 Query: 190 FTGTVGIKPTYGR--------CSRLGIISFAPSLDQAGIITRTVRDSAILLKAI--AGYD 239 GT G KP+ GR +R G+ AP AG + + RD+ +LL+ + A D Sbjct: 243 CCGTFGFKPSVGRVPYAGQASAARPGMAGIAPV---AGPLCYSARDAELLLRVVMEAPVD 299 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D + P + + +T+G+ E L P + +T + + L AG +I Sbjct: 300 DLDDNVLGFP---WIEPAPLAAPTLTIGVLPEDPQVPLHPNMQRTLKTAVERLAAAGHRI 356 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 V++S I EAS R+ R++ Y ++ F + + Sbjct: 357 VDLS----------GQIQCIKEASEISFRF------FRIDPDQTQVKYVSSSGEPFIKSL 400 Query: 360 KHRIMIGTYVLSS--------RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ TY L +D + RA K+ +++R + E +DVI+ P + Sbjct: 401 RY-----TYNLKGDDPEPTLRDLFDLNVERA-KVAAIMRRLYV---ENKLDVIIGPGNQS 451 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP-------------------AAL 452 A P + G V+TV N+ PA +P Sbjct: 452 CAGP----HDTYGI------PVYTVLANLVDYPACVIPFGKANEVADAEYVRDVAYIPPY 501 Query: 453 CEKKM---PLGLQLIGQPFREETLFSVGQIIE 481 C K++ P +QLIG+ ++E L +I+E Sbjct: 502 CPKEVENAPCHVQLIGRRLKDERLMQHAKIVE 533 >gi|221369370|ref|YP_002520466.1| Amidase precursor [Rhodobacter sphaeroides KD131] gi|221162422|gb|ACM03393.1| Amidase precursor [Rhodobacter sphaeroides KD131] Length = 452 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 14/244 (5%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +E +RL S + AVELV++ + I ++ A+ + A A A D R +G A Sbjct: 16 AELAERLASGAVRAVELVEACLAQIAAREPEVQAWAFLDGDHAMAQARALDARRRSGAAL 75 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+G+KD +G+ T G ++ V +L GA+++GK E A Sbjct: 76 GPLHGLPVGVKDVIDVRGMPTGLGLAGGAGRVAQADAFVAARLRAAGAILMGKTATAEAA 135 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKF-TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 + P + + D TPGGSS GS+AAVA + +IGT TGGS+ +P Sbjct: 136 F------------LEPPATRNPHDPARTPGGSSSGSAAAVAAGMVPLAIGTQTGGSVIRP 183 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G G KP++G R G+++ +PSLD G+ R++ D A+L +A+AG D D + Sbjct: 184 AAFCGIAGFKPSFGLIPRSGVLTQSPSLDTMGVFGRSLADVALLAEALAGNDPADPASLL 243 Query: 248 LPVP 251 P P Sbjct: 244 QPAP 247 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 11/95 (11%) Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 R + YL A + RT ++ F + D IL P P G + + + I+N Sbjct: 343 RIPAADYLAALEARTALRAGLEPIFHR-CDAILCPAAP------GPAPDRTTTGDAIFNG 395 Query: 433 VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 ++T GLPA+++P + +P+G QL+G P Sbjct: 396 LWT----FCGLPALTLPLFVSSDGLPMGAQLVGPP 426 >gi|116249992|ref|YP_765830.1| amidase [Rhizobium leguminosarum bv. viciae 3841] gi|115254640|emb|CAK05714.1| putative amidase [Rhizobium leguminosarum bv. viciae 3841] Length = 463 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 135/500 (27%), Positives = 224/500 (44%), Gaps = 57/500 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVEL---VDSYIQAIENSNSQMNAYIEVVAQKARAAAE 57 M+E + + + E R R K +S +E ++ +I A E S S + Y + ARA A+ Sbjct: 1 MTETD-LTIHELRQRFADKSLSPLEYWLALEDHIAAWEPSISALYLY---DPESARAQAK 56 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S +R + L+GIP+ +K+ ATKG + + ++ ++ +L ++GA Sbjct: 57 ASTERWAKAETLGPLDGIPVTLKELIATKGQPVPSGTRAVELKPADADAPAAARLREDGA 116 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V+ K ++ M SS +S++ +PW D T PGGSS G+SAA A I Sbjct: 117 VIFAKTTCPDYGMLSSGLSSFHPLSRNPW---DITQN--PGGSSAGASAAAAAGYGPLHI 171 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKA 234 GTD GGS+R PA +TG G KP++GR I P G + RTV D+A + Sbjct: 172 GTDIGGSVRLPAGWTGIFGFKPSHGR------IPADPYYVGRCVGPMARTVEDAAFSMAT 225 Query: 235 IAGYDECDATCVNLPVPDYERA-LDQSIQGMTVGIPKEYRL-----DYLSPTIDKTWQQG 288 ++ D D T +LP D+ LD + GM +G+ + D + ++ +Q Sbjct: 226 LSRPDWRDGT--SLPPNDFNWMDLDIDLSGMKIGLMLDAGCGLAVDDEIRTAVETAAKQ- 282 Query: 289 ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 + AGA I+ + T+ L + ++A D R +D + Y Sbjct: 283 ---FEAAGATILSVQPVLTRAMLDGLDNFWRSRLWGDIADLDEER-------RDSILPYI 332 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 ++G G ++ + V + R ++ + ++R R FTE VD +L+PT Sbjct: 333 RDWAMG-GADI-------SGVDAVRGFN----QTIEMRKSCGRLFTE-----VDALLSPT 375 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P ++P + + FTV NM+ PA S+ MP+GLQ++G F Sbjct: 376 NPIISYPAEWASPTNDPALPFEHIGFTVPWNMSEQPAASINCGFSRSGMPIGLQIVGPRF 435 Query: 469 REETLFSVGQIIEKEAGYFR 488 + + + + E G R Sbjct: 436 DDMRVLRLSKAFEDWMGGVR 455 >gi|229494670|ref|ZP_04388428.1| amidase [Rhodococcus erythropolis SK121] gi|229318337|gb|EEN84200.1| amidase [Rhodococcus erythropolis SK121] Length = 492 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 115/462 (24%), Positives = 211/462 (45%), Gaps = 45/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA-AEESDKRIINGDARD-LEG 73 +R +++S VE++DS++ IE N +NA + + ++A A A E D ++ +G+ + G Sbjct: 33 IRRREVSCVEVMDSFLDQIELHNPAVNAIVALRDREALTAEARERDSQLASGEYLGWMHG 92 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +KD A KG+ + S + + +++ GA+++GK N EF +GS Sbjct: 93 FPHAVKDLSAAKGLPFTSGSPMFADRIAEDDELFVKRIRSAGAIVIGKTNTPEFGLGSQT 152 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +SP+ + T GGSSGG++A++A + + G+D GS+R P++F Sbjct: 153 YNPVWGTTVSPY-----DNSRTAGGSSGGAAASLALRMLPVADGSDYMGSLRNPSAFNNV 207 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG +P++GR G I+ + G + RTV D A LL +AG D + + Sbjct: 208 VGFRPSWGRIPETGFIAQGAVV---GPMGRTVTDVAHLLSTMAGPDAYAPLGIREDPAVF 264 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +L + ++G + ++ YL+ + G+ L ++ ++ E + ALP Sbjct: 265 TESLARDLKGSRIAWVGDWN-GYLAT------EPGVLALCESSFEVFEQLGCRVEAALPD 317 Query: 314 YYIISPAEASSNLARYD-GVRYGLRVEGKD--ILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + P + R+ + GL + D + E+ + E++H + + + Sbjct: 318 F---KPEDIWQLFLRWRWWAQLGLIDQYNDPSLRELMKPE----LLWELEHAVTLSALDV 370 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGSM 426 + +A + R T+ FE D IL P+ FP K E G Sbjct: 371 T---------KAAEARNGWLSAITKMFET-YDYILAPS--AQVFPFDKNTHWPETVDGRS 418 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQ 466 Y+ V MAG+P +P ++ +P+G+Q+IG+ Sbjct: 419 MDTYHRWMETVVPWTMAGVPVAGMPVGFDDRSLPMGIQIIGR 460 >gi|254428707|ref|ZP_05042414.1| allophanate hydrolase [Alcanivorax sp. DG881] gi|196194876|gb|EDX89835.1| allophanate hydrolase [Alcanivorax sp. DG881] Length = 599 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 121/420 (28%), Positives = 185/420 (44%), Gaps = 61/420 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP +KD G+ T A C + P ++T + L GA+++GK N+D+FA Sbjct: 62 LYGIPFAVKDNIDVAGMPTTAACPDF--AYTPEADATAVRLLRKAGAIVVGKTNLDQFAT 119 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG V +P+ + GGSS GS+ AV+ L S+GTDT GS R PA+ Sbjct: 120 GLVGTRSPYGEVPNPFNP-----DYLSGGSSSGSATAVSLGLVPFSLGTDTAGSGRVPAA 174 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 FT TVG+KPT G S G++ +LD I +V D+ + + I +D DA Sbjct: 175 FTNTVGLKPTRGAISTHGVVPACRTLDCVSIFALSVDDAQQVYRVIGQFDNDDA------ 228 Query: 250 VPDYERALDQS-IQGM----TVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIVEIS 303 Y R S G+ T+GIPK+ L + T K W+Q + +K A +V + Sbjct: 229 ---YSRPAPASQTTGLPARPTLGIPKD--LPWFGDTQAKQLWEQQLEQVKQI-ADLVTVD 282 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI 363 Q A Y +G + E + T S+ Q + Sbjct: 283 TMVLQDAAALLY-----------------------QGPWVAERFTVTESL-LQQNPDALL 318 Query: 364 MIGTYVL--SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP---TSAFPLGK 418 + +L ++ + RA+ +KR ++A + VD +L PTTP T A Sbjct: 319 PVIRDILEPAATLTAADGFRAQYQLAALKRQ-SDALMETVDALLLPTTPGIYTRAAVQAD 377 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + +G +T VN+ L A+++P E +P G+ LI +++ L GQ Sbjct: 378 PITLNSQLG-----TWTNFVNLLDLCALALPGGFREDGLPGGVTLIAPAWQDHALADFGQ 432 >gi|78063474|ref|YP_373382.1| amidase [Burkholderia sp. 383] gi|77971359|gb|ABB12738.1| Amidase [Burkholderia sp. 383] Length = 466 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 128/499 (25%), Positives = 211/499 (42%), Gaps = 64/499 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + +E R+R +++SA E+ D+ + ++ N +NA IE + R A+ D Sbjct: 1 MTQLWQLPATELAKRVRHREVSAREVADAVLDRLDAVNPAINAVIEHRPDEVRRQADAVD 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I GD L G+P+ +K G T + + + H +S V + G ++L Sbjct: 61 RAIARGDDPGPLAGVPVTVKINVDQAGFATTNGTRLQEHLIAHADSPVVGNIRKAGGILL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ N FA+ +G +P TPGGSSGG++AAVA + ++GTD Sbjct: 121 GRTNSPTFALRWFTSNLVHGHTRNP-----RNPSLTPGGSSGGAAAAVAAGIGPLAVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISF-----APSLDQAGIITRTVRDSAILLKA 234 GGS+R PA G GI+P+ GR S A + AG I RT+ D ++ L+A Sbjct: 176 IGGSVRYPAYACGVHGIRPSLGRVPAFNASSPERAIGAQLMSTAGPIARTIDDLSLALRA 235 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY------LSPTIDKTWQQG 288 A D D V +P E +PK L + P ++ + Sbjct: 236 FAAPDPRDPWHVAVPFDGRE-------------VPKRAALCVRPGGLQVVPEVEAALRDA 282 Query: 289 ISWLKDAGAKIVEI--SLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 L DAG + EI + P + AL ++ +A +N DG Sbjct: 283 ARRLIDAGWTVDEIDDTPPMREAALLQEQLWLGDGFDALTNAVLKDG------------- 329 Query: 345 EMYENTRSIGFGQEVKHRIM-IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + + + V+ ++ + V+S RA RT + R + F V Sbjct: 330 ----DPGAAAVVEAVRGKVRDLPADVIS---------RALVRRTTLTRQW-RLFLDDYAV 375 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQ 462 +L P + FP + G ++ T+ A+ GLP ++V AL +P+G+Q Sbjct: 376 VLLPVSSELPFPDDLDRQGQGGFDRVWEAQLTLRALPAMGLPGLAVTTALV-NGVPVGVQ 434 Query: 463 LIGQPFREETLFSVGQIIE 481 ++ RE+ G+ IE Sbjct: 435 VVAAHHREDLCLLAGRDIE 453 >gi|317405643|gb|EFV85942.1| amidase [Achromobacter xylosoxidans C54] Length = 486 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 131/481 (27%), Positives = 205/481 (42%), Gaps = 52/481 (10%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 ++S EL D+ +QA N ++NA IE + A ++ L G+P IK Sbjct: 22 EVSPRELADAALQACAQLNPRINAVIESWSPDLADVAPARERN------SPLAGVPFLIK 75 Query: 80 DC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D A G + S + GF +S + ++ + G V LG+ EFA + E++ Sbjct: 76 DVGVAMTGRKNEFGSRLAQGFTAAADSLLMRRFREAGLVTLGRTATPEFAWSGTTESTLC 135 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 GP +PW + SSGG++AAVA + + TD GSIR P++ G G+KP Sbjct: 136 GPTRNPWNVAHGSGG-----SSGGAAAAVAAGIVPLAHATDAAGSIRIPSAACGVFGLKP 190 Query: 199 TYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERAL 257 T GR S L + L ++R+VRDSA LL A+ G + + + P Y + Sbjct: 191 TRGRVSNGLALEEAINGLAAQLGVSRSVRDSAALLDAVHGAADGEPYAIAPPAGRYLAQV 250 Query: 258 DQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI 316 + +G+ P+ + + + + + G ++ E P + A+ Sbjct: 251 GIEPGKLRIGVMPQAWGGRRTQACVLERLAEAVRLCASLGHEVEEAEAP-LGVSWEAFVH 309 Query: 317 ISPAEASSNLARY-DGV------RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 S S+N+A + DG+ R L L +Y R IG E+ H Sbjct: 310 ASSVLWSANIAAWIDGIAGAMGRRPDLATLEPQTLAVYRTGRGIG-AIEMVH-------- 360 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM-GH 428 A +R + R F + D++LTPT P A LG + +M GH Sbjct: 361 ------------ALDLRNAVTRSVAAFFSR-YDLLLTPTLPELAPALGTYAAGADTMDGH 407 Query: 429 IYNDV------FTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + D FT N AGLPA+SVP +P+G+Q + RE+ LF V +E Sbjct: 408 QWTDCVFGNSPFTPVFNAAGLPAMSVPLFQDAATGLPIGMQFVAPAGREDVLFQVAGQLE 467 Query: 482 K 482 + Sbjct: 468 R 468 >gi|260177218|gb|ACX33941.1| putative amidase [uncultured prokaryote AT5] Length = 462 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 116/438 (26%), Positives = 189/438 (43%), Gaps = 45/438 (10%) Query: 50 QKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ 109 ++A A E + R + G L G+P G+KD G+ T A + P + + Sbjct: 49 EEALRACAEIEARWVAGQNLPLYGVPFGVKDNIDVAGMPTTAACPAFS-YAPERSARSVE 107 Query: 110 KLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAG 169 L GAV LGK N+D+FA G S S YG + + + GGSS GS+A VA Sbjct: 108 LLLSAGAVCLGKTNLDQFATGLSGTRSPYGACGAAGNPL-----YVSGGSSSGSAAVVAS 162 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 + + ++GTDTGGS R PA F G VGIKPT GR S G++ P+LD + +V D Sbjct: 163 GVVSFALGTDTGGSGRIPAGFNGIVGIKPTIGRISTRGLVPNCPTLDCVSVFALSVDDGM 222 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 +L I G+D D + P P + +S + +R Y P + ++ Sbjct: 223 QVLTVIEGFDVADP--FSRPAPSRPPTVLRSPPFRYGVLAPRHREWYGMPECARIYEAAC 280 Query: 290 SWLKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE 348 L G ++VEI P + + AE + LA + G +++E Sbjct: 281 ERLCRLGDQLVEIDFAPFREAGQMLFDGPWIAERHAALAPFINGHAG---------DLFE 331 Query: 349 NTRSI--GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 TRS+ GQ G + L+ ++RD + F +D ++ Sbjct: 332 VTRSVLQTSGQYSAGDAFTGIHRLAQ----------------LRRDVAKQFAT-IDALMV 374 Query: 407 PTTP---TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 PT P T A + +GH ++ N+ L AI++P + + +G+ L Sbjct: 375 PTAPRPFTIAEMTADPIRLNNQLGH-----YSYFANLLDLCAIAIPCGVLSCGVAMGVTL 429 Query: 464 IGQPFREETLFSVGQIIE 481 + + +E + ++ + ++ Sbjct: 430 LAPAWADERMANLARRLD 447 >gi|225567833|ref|ZP_03776858.1| hypothetical protein CLOHYLEM_03906 [Clostridium hylemonae DSM 15053] gi|225163311|gb|EEG75930.1| hypothetical protein CLOHYLEM_03906 [Clostridium hylemonae DSM 15053] Length = 480 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 107/309 (34%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL 71 SR L SK+++A L IQ + + ++NA E+ A +R++ G L Sbjct: 16 SRGNLSSKELTAAYL--KRIQQYDQNGPKINAVAELNPDAIFTAEALDRERMLRGPRGPL 73 Query: 72 EGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 GIP+ +KD +T +HT A S L ++ + ++L GAV+LGK N+ EFA Sbjct: 74 HGIPVLLKDNISTGDKMHTTAGSEALADNFARKDAPLVKQLRKAGAVILGKANLSEFARY 133 Query: 131 SSNE-----TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 + E +S G V +P+ + F GSS GS+AA AG C+A++GT+T GSI Sbjct: 134 IAQEFPDGYSSRCGQVKNPYDA-----SFPVSGSSSGSAAAAAGCFCSAAVGTETAGSIT 188 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI-AGYDECDAT 244 P+ F+G G+KPT G SR GII D AG + RTV D AILL A+ G D DA Sbjct: 189 YPSIFSGICGLKPTVGLVSRSGIIPIC-GQDTAGPMARTVTDCAILLSAMTTGPDADDAA 247 Query: 245 --CVNLPVP-DYERALD-QSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAK 298 C +P DY L + +GM +G+ + R D S D +++ + ++ AGA+ Sbjct: 248 TGCTEHLIPKDYTVFLKPEDFRGMRIGVNR-VRCDKESFPEDSDDMFEKELLLMQQAGAE 306 Query: 299 IVEISLPHT 307 +V+ + T Sbjct: 307 LVDCDIAFT 315 >gi|317404234|gb|EFV84671.1| amidase [Achromobacter xylosoxidans C54] Length = 507 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 131/485 (27%), Positives = 221/485 (45%), Gaps = 45/485 (9%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ E R + ++ +S VEL+++ I IE N +NA +AR A +++ ++ G Sbjct: 10 LSAVELRRLIGARQLSPVELLEACIARIEAVNPYINAVTATAFDRARIEARAAEQAVMAG 69 Query: 67 D-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D L G+P+G+KD T G+ T S I P + T+ +L GA++ K N+ Sbjct: 70 DTLGLLHGLPLGVKDLEPTAGLLTTYGSPIYRDHVPADDVTLVARLRRAGAIVAAKTNVP 129 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G+++ + +G +P+ GGSSGGS+AA+A L G+DTGGS+R Sbjct: 130 EMGAGANSRNTVWGATGNPFNP-----NLNAGGSSGGSAAALASDLFPLCTGSDTGGSLR 184 Query: 186 QPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PA+ G VG +P+ G + + + P + G + RTV D+ + + A AG D D Sbjct: 185 IPAAKCGVVGFRPSPGVVPSVRKPLGWTP-ISVVGPMGRTVADACLQMAASAGPDAGDPL 243 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 L + + + V +++ L + I T++ I+ ++ A I + Sbjct: 244 SYPLDPLQFLAPGSADLGRLRVAYTEDFGLCDVDDGIRATFRAKIAAMRHLFAACDPIEI 303 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDILEMYENTRS---IGFGQEVK 360 + A ++ R + G+R KD + NTR+ +G +K Sbjct: 304 DFGE-----------AHRCFDVLRAEAFVAGMRDAYEKDPASLGPNTRANFEMGAAMSLK 352 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP---LG 417 D + +A + R LIKR F AF+ D+IL+PTTP S FP L Sbjct: 353 ---------------DCAWAQAEQTR-LIKR-FQRAFDD-YDLILSPTTPVSPFPWTQLY 394 Query: 418 KEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 E N + Y + T + + PA+++P K MP GLQ++G+ + + + Sbjct: 395 AEAINGKRQENYYRWLALTYVITLTTHPALTLPCGRDHKGMPFGLQIVGRFRGDREVLAA 454 Query: 477 GQIIE 481 Q +E Sbjct: 455 AQGME 459 >gi|297181353|gb|ADI17543.1| Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit and related amidases [uncultured alpha proteobacterium HF0130_06E21] Length = 460 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 118/489 (24%), Positives = 214/489 (43%), Gaps = 72/489 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +LNF++V+E ++ + + +AV + ++ + IE S + A+ V A A D+ Sbjct: 33 DLNFLSVTEIVLQIAAGETTAVAVTEACLARIEARESDLRAWAFVDHGLALQQAHARDRD 92 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G L G+P+G+KD T + T+ S I G RP ++ + GA +LGK Sbjct: 93 TPCG---LLHGVPLGVKDIIDTHDMPTEMGSPIYAGHRPVADAACVALVRGAGATILGKT 149 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 EFA S+ GP +P + S SS GS+AAVA ++ A+ GT TG Sbjct: 150 VTTEFA------GSHPGPTTNPHATAHSPGG-----SSSGSAAAVADYMVPAAFGTQTGS 198 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI +P+++ G VG KPT+G + GI A SLD G+ R V D IL + Sbjct: 199 SILRPSAYCGVVGYKPTFGTYNIAGIKPAAQSLDTLGLHVRAVEDIQILSAVL------- 251 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVE 301 L++ + +T +P R+ +P + + + L+DA ++ Sbjct: 252 --------------LNRPFEPLT-ALPSSPRIGVCRTPLWEAAQAETRAALEDAATRLAR 296 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + LPA + S+L + + ++ YE +R + + Sbjct: 297 AGAVMSDVVLPAAF--------SDLE-----------DARILINCYERSRHMANEWRDHN 337 Query: 362 RIMIGTYVLSSRC-----YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 ++ + L + Y+ Y+ A ++ + ++ F+ +D++L P A P Sbjct: 338 DLLSDRFKLVMQTGLDAPYED-YVAAMRLSEVCRQQSDNVFDS-LDILLAPCVDGEA-PE 394 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 G E + ++ + LPA+S+P +P+G+QL+G+ ++ L S Sbjct: 395 GLENGGNPRFAGLWTAI--------RLPALSLPTHTGPNGLPIGIQLVGRYRDDDRLLSA 446 Query: 477 GQIIEKEAG 485 + ++++ G Sbjct: 447 AKWVQEKIG 455 >gi|332559959|ref|ZP_08414281.1| amidase [Rhodobacter sphaeroides WS8N] gi|332277671|gb|EGJ22986.1| amidase [Rhodobacter sphaeroides WS8N] Length = 441 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 173/422 (40%), Gaps = 58/422 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L+G+P+ KD F T G+ T+A S +L G P ++ V G V LGK +M E A Sbjct: 71 LDGVPVSWKDLFDTAGVATEAGSALLKGRVPDEDAAVLGTATLGGLVCLGKTHMSELAFS 130 Query: 131 SS--NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF-LCAASIGTDTGGSIRQP 187 N + P ++ D G S +AA F L A+IG+DTGGS+R P Sbjct: 131 GLGLNPVTATPPCVN--------DPAAVAGGSSSGAAASVAFGLAPAAIGSDTGGSVRIP 182 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A++ G+K T GR S G + A D G + RTV D A+LL + G D Sbjct: 183 AAWNDLAGLKTTAGRLSLAGTVPLAARFDTVGPLARTVEDCALLLAVLEGGRPADLR--- 239 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 S+ G + + L+ L + +++ ++ L AGA+I + P Sbjct: 240 ----------GASLAGRRFLVLETLALEDLREAPARGFEEAVARLARAGARIERGAAPEV 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A+ + EA + A E+ E + F + R G Sbjct: 290 VEAMAMAGPLFTGEAYATWA-----------------EVIEGAPDLMF-PRILERFRSGA 331 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427 + + + + + R +R A G D +L PT+P P E + Sbjct: 332 SITAVE-FVTAWQRLEALRAAWA-----ARTAGYDAVLVPTSPI--LPPDAERLLTDESY 383 Query: 428 HIYNDVF----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 ++ ++ T N+ GLPA+++P + G+ L+GQP EE L +G E+ Sbjct: 384 YVGENLLALRNTRIANLMGLPALTLPTG----QPSCGISLMGQPMGEERLLRLGAAAERA 439 Query: 484 AG 485 G Sbjct: 440 LG 441 >gi|170780846|ref|YP_001709178.1| putative secreted amidase [Clavibacter michiganensis subsp. sepedonicus] gi|169155414|emb|CAQ00521.1| putative secreted amidase [Clavibacter michiganensis subsp. sepedonicus] Length = 626 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 137/523 (26%), Positives = 222/523 (42%), Gaps = 92/523 (17%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ------MNAYIEVVAQKARAAAEESD 60 + V+++ L S ++V L +Y+ I+ + + A I A A A D Sbjct: 62 LGVADAVALLESGSTTSVALTRAYLARIDAYDDDGADGKGLQAVI-TANPDALATATTLD 120 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 G R L G+P+ +KD AT + T S L +R +ST +L GA++L Sbjct: 121 PERAAGTIRGPLHGVPVVVKDNHATADMPTTVGSAALRDYRTAADSTAVARLRAAGAIIL 180 Query: 120 GKLNMDEFA-MGSSNETSYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 K N EFA G+S +S G +P+ RS ++ ++ ++ A AG +G Sbjct: 181 AKTNTSEFAWHGTSTLSSARGRTANPYDRSWSASGSSGGTAAAVAAAYAPAG------LG 234 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TD+ GSI PA+ VG +PT G S GI+ +P D +G +T TV D+A+L + +AG Sbjct: 235 TDSCGSILGPAAHQSLVGFRPTMGLTSTAGIVPLSPRQDVSGPMTTTVADAALLTEVLAG 294 Query: 238 YDECDATCVNLPVPDYERALDQSIQGM--------TVGI---PKEYRLDYLSPTIDKT-- 284 D D + E+A D + G+ +G+ P E D P + +T Sbjct: 295 RDPADPLTAIV----DEQATDAYVAGLRPDALAGKRIGVVRWPSEE--DPERPGLAETTA 348 Query: 285 -WQQGISWLKDAGAKIVEISLPH--------------TQYALPAYYIISPAEASSNLARY 329 ++Q + L+ GA++VE+ L + A+ + +PA S+ Sbjct: 349 LFEQAVRDLEAQGAEVVEVPLTREFVEQTLQSGGWRDMRPAIDRFLRETPATWSA----- 403 Query: 330 DGVRYGLRVEGKDILE----MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI 385 R R E D+L M + ++ G I ++ + Y Sbjct: 404 ---RVAARTEPPDVLSFADVMADRPSALTDGD-------IAYFLGHEDIPNPEYE----- 448 Query: 386 RTLIKRDFTEA------FEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN 439 R++ ++D +A EQGVD + PT+ TSA P G + D + N Sbjct: 449 RSIAEQDAGKAAADAFFVEQGVDALAMPTSATSATP--------AWAGTTFCD---IGAN 497 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 G+P ISVPA P+GL+L R+ L ++ E+ Sbjct: 498 T-GIPTISVPAGFTSTGAPVGLELAAPRSRDGDLLAMAYAYEQ 539 >gi|113867735|ref|YP_726224.1| amidase [Ralstonia eutropha H16] gi|113526511|emb|CAJ92856.1| Amidase [Ralstonia eutropha H16] Length = 493 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 201/480 (41%), Gaps = 62/480 (12%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT-KGIHTQACSHIL 96 N Q+NA ++ ++ E I++ D R L G+P +KD T +G ++ CS + Sbjct: 40 NPQVNAVLDYWPEE----VEIQSAGIVSVDPRPLGGVPFLLKDLGVTMQGRRSEMCSRLA 95 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 G +S V G + LG+ M E A+ ++ E YGP +PW Sbjct: 96 MGTVAKEDSYVMTSFRQAGLITLGRTTMPELAVSTTTEPVLYGPTRNPWSLQHGAGG--- 152 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD 216 SSGG+ AAVA + + TD GGSIR PA+ G G+KPT GR +S P +D Sbjct: 153 --SSGGAGAAVAAGIVPIAHATDGGGSIRVPAACNGLFGLKPTRGR------VSNGPHVD 204 Query: 217 QA----GI---ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 + G+ ++RTVRDSA LL I G + + P Y + Q + +G Sbjct: 205 EVWNGLGVHFAVSRTVRDSAALLDGIHGGGVGEPYYIAPPKDSYLSEIRQQPGNLKIGF- 263 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 ++P G++ A+ +E H P + A N A+ Sbjct: 264 ------MMNPFSAARTDTGVADALSKVARTLESLGHHVHEVAPDLGVSWDAFVQCN-AKI 316 Query: 330 DGVRYGLRVE------GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 LR+ G+ + E + ++ ++ I +G L L A Sbjct: 317 WAANAALRINDIAAATGRTVDEKHLEPATLAL---YRYGIEVGAVEL---------LSAL 364 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS-------MGHIYNDV-FT 435 ++R + R F D++LTPT P +G E N G+ + H+ + FT Sbjct: 365 QVRNTVTRALGRFFGN-YDILLTPTLPRLPPRIG-EYNRIGTSVDGLDWIAHVLSQSPFT 422 Query: 436 VAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY--FRPHKW 492 N+ G PA+SVP ++ + +P+G + RE TLF + +E + RP W Sbjct: 423 ALSNVTGTPAMSVPLSIDPQSDLPIGSHFMSGFGREHTLFRLAAQLEAACPWRERRPPVW 482 >gi|108800417|ref|YP_640614.1| amidase [Mycobacterium sp. MCS] gi|119869546|ref|YP_939498.1| amidase [Mycobacterium sp. KMS] gi|126436040|ref|YP_001071731.1| amidase [Mycobacterium sp. JLS] gi|108770836|gb|ABG09558.1| Amidase [Mycobacterium sp. MCS] gi|119695635|gb|ABL92708.1| Amidase [Mycobacterium sp. KMS] gi|126235840|gb|ABN99240.1| Amidase [Mycobacterium sp. JLS] Length = 504 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 141/501 (28%), Positives = 221/501 (44%), Gaps = 51/501 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F +++ +L S ++A +LV + AI S +NA+ V+A++A A A E+D+R Sbjct: 14 FPTLTDQLYQLASGAVTADDLVRRSLHAISASQPTLNAFRVVLAEQALAEAAEADRRRAA 73 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNM 124 GD R L GIPI +KD G+ T+ + RP ++ V ++L GAV++GK N Sbjct: 74 GDQRPLLGIPIAVKDDVDIAGVPTRFGT--AGTVRPADADAEVVRRLRAAGAVIVGKTNT 131 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 E +G +PW + + TPGGSSGGS+AAVA L A+IG+D GS+ Sbjct: 132 CELGQWPFTSGPAFGHTRNPW-----SREHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSV 186 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA++ VGIKP GR S + + G++ RTV D+A++L A +G D Sbjct: 187 RIPAAWCHLVGIKPQRGRISTSPLAEAFNGITVNGVLARTVTDAALVLDAASGNAAGDR- 245 Query: 245 CVNLPVP----DY-ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + P P +Y RA G++ P L P I L++ G Sbjct: 246 --HRPAPVRVSEYVARAPGPLRIGLSTKFPFTGFHATLHPDIRAALHTVSGHLEELG--- 300 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYG-LRVEGKDILEMYENTRSIGFGQE 358 + + PA+ + G+ + L +L+ E +G+G + Sbjct: 301 ---------------HTVRPADPDYTV----GMSWNFLSRSTSGLLDWAER---LGYGVD 338 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 R + R H LR + + + DV+L PTT P Sbjct: 339 FDKRTKANLRM--GRLLSEHVLRKARAKEAAAQRRIGWVFNICDVVLAPTT-AQPPPRVH 395 Query: 419 EENNSGSMG----HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + + G + I T N+ G P+I+VPA +P+G+QL+G E L Sbjct: 396 DFDELGGLATDRTMIKACPVTWPWNLLGWPSINVPAGFTADGLPIGVQLMGPAESEPLLI 455 Query: 475 SVGQIIEKEAGYF--RPHKWW 493 S+ +E +G+ +P WW Sbjct: 456 SLAAELEAVSGWVARQPKVWW 476 >gi|21245039|ref|NP_644621.1| allophanate hydrolase [Xanthomonas axonopodis pv. citri str. 306] gi|21110768|gb|AAM39157.1| urea amidolyase [Xanthomonas axonopodis pv. citri str. 306] Length = 599 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 125/478 (26%), Positives = 205/478 (42%), Gaps = 49/478 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE--GIP 75 ++ + EL+ I + + + + + ++R A + GD L G+P Sbjct: 17 AQGAAPAELLSCLIAGLPQGDVAWISRLSLDGLQSRLAGLAQQLMQVGGDLSRLPLYGVP 76 Query: 76 IGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 KD G+ T AC ++P + + V +L GAV++GK N+D+FA G Sbjct: 77 FAAKDNIDVAGLPTTCACPEF--AYQPTHNAAVIDRLEAAGAVVIGKTNLDQFATGLVGT 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S YGPV + +++ ++ GGSS GS++ VA L ++GTDT GS R PA V Sbjct: 135 RSPYGPVPNAFKA-----EYISGGSSSGSASVVARGLVPFALGTDTAGSGRVPAGHNNLV 189 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPT G S G++ +LD ++ +V D+ L+A+ G+D DA PV Sbjct: 190 GLKPTRGMVSNRGLVPACRTLDCITVLALSVDDADAALRAMGGFDASDAYSRQAPV---- 245 Query: 255 RALDQSIQGMTVGIPKEYRLDYLSPT-IDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 R + + +GIP D+ ++ + + L+ G ++ I P Sbjct: 246 RPASWPAKPV-LGIPASP--DWFGDIQAERVYTDALRRLETIGVELELIDF------APL 296 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + E ++ L Y+G G R +E N + V+ + T + Sbjct: 297 F------EVAALL--YEGPWVGERYAA---IEELMNAKPEVVHPVVRAIVQKATNFSAVD 345 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP---TSAFPLGKEENNSGSMGHIY 430 Y + Y R R EA QG+D +L PT P T L + MG Sbjct: 346 AYKAEYRRMALARK------AEALMQGLDGLLVPTAPSIYTIEQLLADPVTMNARMG--- 396 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 V+T VN+ AI++PA + +P G+ LI + E L + G+ + A + R Sbjct: 397 --VYTNFVNLLDFSAIALPAGMRADGLPAGITLIAPAWHEARLIAFGRRWQAAAPWKR 452 >gi|242072440|ref|XP_002446156.1| hypothetical protein SORBIDRAFT_06g002870 [Sorghum bicolor] gi|241937339|gb|EES10484.1| hypothetical protein SORBIDRAFT_06g002870 [Sorghum bicolor] Length = 494 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 134/514 (26%), Positives = 216/514 (42%), Gaps = 100/514 (19%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGI 74 ++ +++ LV Y+ I N +++A IEV AA +R + R L G+ Sbjct: 38 FKNGSLNSTALVRYYLDQIARLNPKLHAVIEVNPDALGDAARADAERASSSGGRGLLHGV 97 Query: 75 PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF-----A 128 P+ +KD AT+ ++T A S L G +V + D GA++LGK N+ E+ A Sbjct: 98 PVLVKDLIATRDRLNTTAGSFALLG-------SVAGR--DAGAIVLGKSNLPEWGNMRSA 148 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 MG ++ G ++P+ K P +S GS+ A A + A ++GT+T SI PA Sbjct: 149 MGLHGWSARGGQAMNPY-----VLKMDPCEASTGSAIAAAANMAAVTLGTETIASILCPA 203 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN- 247 S VGIKPT G SR G+I F D G + RTV D+ +L AI GYD+ DA Sbjct: 204 SANAVVGIKPTVGLTSRSGVIPFTLRQDTVGPLCRTVADAVHVLDAIVGYDDLDAEATMA 263 Query: 248 ----LPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE- 301 +P Y++ L ++ +GIP + + ++Q I ++ GA ++E Sbjct: 264 ASQYIPQGGYKQFLKIDGLRDKRIGIPNGFF--HFETKTGLVYKQHIETMRRLGANVIEN 321 Query: 302 ISLPHTQYA----LPAYYIISPAEASSNLARY-------------DGVRYGLR------- 337 +++ + + + + +PAE NL Y D + + + Sbjct: 322 LNIENLSVSRNTTTSGFAVAAPAEFKINLNNYLSNLSYTPVRCLADIIAFNIAHPDEEKL 381 Query: 338 VE-GKDILEMYENTRSIG-FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTE 395 +E + +L + E+TR IG + HR+ L A + ++K Sbjct: 382 IEYDQQLLLLSESTRGIGPLERAAIHRM--------------EELSANGVEKMMK----- 422 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 E +D I TP + + +A N GLP I VPA E Sbjct: 423 --EHCLDAIFTPDSSVAT---------------------VLAYN--GLPGIEVPAGYDEN 457 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +P G+ G E L + E+ RP Sbjct: 458 GVPFGVTFGGLRGYEPRLVEMAYAFEQATKVRRP 491 >gi|310797970|gb|EFQ32863.1| amidase [Glomerella graminicola M1.001] Length = 557 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 17/292 (5%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +++ +LV Y+Q + +++ +++ + AA+ +R L GIP +KD Sbjct: 10 LTSQQLVSCYMQRTYQTQDYIHSILQINPDVFQIAAKMDAERKAGKVRGPLHGIPFTVKD 69 Query: 81 CFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYY 138 ATK + T A S+ L G ++ V +L D GAV+ GK + E+A M S+N + + Sbjct: 70 NIATKDSMETTAGSYALLGSIVPRDAHVVARLRDAGAVLFGKAALSEWADMRSNNYSEGF 129 Query: 139 ----GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 G SP+ PGGSS GS+ VA A ++GT+T GS+ PA V Sbjct: 130 SARGGQCRSPYNF-----TLNPGGSSTGSAVGVAANAIAFALGTETDGSVINPAERNAIV 184 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPV 250 G KPT G SR G+I + D G RTVRD+ AI G D D + + P Sbjct: 185 GFKPTVGLTSRAGVIPESEHQDSVGTFGRTVRDAVYAFDAIYGIDSRDNYTLSQEGHTPE 244 Query: 251 PDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 Y + L +++G T G+P Y + Q + + GA I+ Sbjct: 245 GGYTQFLSTKAALKGATFGLPWNTFWVYADDEQKEALGQILKLITSEGATII 296 >gi|109898372|ref|YP_661627.1| amidase [Pseudoalteromonas atlantica T6c] gi|109700653|gb|ABG40573.1| Amidase [Pseudoalteromonas atlantica T6c] Length = 405 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 11/221 (4%) Query: 34 IENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACS 93 + N+ S + V Q + +ESD+ + DA L G+ + +KD F KG+ T A + Sbjct: 1 MSNAASHFISQTPYVLQLNQEPGQESDQDKQSSDA-SLNGVSLAVKDLFHIKGLPTTAGN 59 Query: 94 H--ILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDST 151 + P S L GA ++GK DE A + + +YG +P+ ++ + Sbjct: 60 PDWLASHPAPQQTSPAVNALLHAGASLVGKTITDELAYSLNGQNIHYG---TPF-NISAP 115 Query: 152 DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISF 211 D+ PGGSS GS+ AV +GTDTGGSIR PAS+ G G++PT+GR S ++S Sbjct: 116 DRL-PGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGLFGLRPTHGRVSCEHMVSL 174 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 APS D G ITR + + + + D+ C PV D Sbjct: 175 APSFDTVGWITRDLSTLDKVAQVLLNKDDDQTPC---PVKD 212 Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 DVI PTTP +A + + + ++ +A + GLP + +P A+ + P+G Sbjct: 325 DVIFLPTTPGAAPLINTPSEQLATYRNTLMNLTCIA-GLCGLPQLHIPLAI-NPQAPIGF 382 Query: 462 QLIGQPFREETLFSVGQII 480 LIGQ ++ L + +++ Sbjct: 383 SLIGQKNHDKQLIEIARML 401 >gi|154253039|ref|YP_001413863.1| amidase [Parvibaculum lavamentivorans DS-1] gi|154156989|gb|ABS64206.1| Amidase [Parvibaculum lavamentivorans DS-1] Length = 474 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 141/494 (28%), Positives = 216/494 (43%), Gaps = 57/494 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M EL + + + +R +++A+ELV++ I IE N Q+NA +E +AR AA+ Sbjct: 12 MPELAKLDATAQAELVRKGELTALELVEAGISRIEQVNPQVNAVVETFYDRAREAAK--- 68 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVML 119 ++ G G+P +KD KG + S L P + + K +G VM+ Sbjct: 69 GKLPEG---PFTGVPNLVKDLDNLKGTRATSGSRFLAQNISPETDPIIAGK-EKSGFVMV 124 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF + + E+ G +PW S PGGSSGG++AAVA + + TD Sbjct: 125 GKSNTPEFGLLGTTESLLLGACNNPWNLAHS-----PGGSSGGAAAAVASGMVPVAHATD 179 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK--AIAG 237 GGSIR PAS G G+KP+ GR LG + ++R+VRDSA LL + G Sbjct: 180 GGGSIRIPASCCGVFGLKPSRGRI-YLGERQLPGDIGFQHCVSRSVRDSATLLSLTELTG 238 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D + P +R L + M +Y+ +P + + D G Sbjct: 239 KDAVLPPVGRVEGPGKKR-LRIAFGTM------DYKGREPAPDVKAALEDVAQLCADLGH 291 Query: 298 KIV----EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 +IV I P + A A + PAE + + + GL E +LE + ++ Sbjct: 292 EIVPAQNRIDGPAFEDAFLAAWASGPAELVALVK-----QMGLDPEA--VLEPW----TL 340 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G E+ + GT S +H+ + TEAF DV LTP T Sbjct: 341 GLA-ELFNSKPAGTLEKSL----AHFAKVTAQ--------TEAFMADYDVWLTPVLATVP 387 Query: 414 FPLGKEENNSGSMGHIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P E+ + +Y VF T N+ G PA+SVP + + +P+G Q P Sbjct: 388 -PKTGEQAPTVPFDTLYERVFNYVTYTPLHNVVGTPAMSVPLSWNKAGLPIGSQFAALPG 446 Query: 469 REETLFSVGQIIEK 482 +E+ L + +E+ Sbjct: 447 QEKVLLELAFELEQ 460 >gi|315164570|gb|EFU08587.1| amidase [Enterococcus faecalis TX1302] Length = 528 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 25/268 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KP++ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPSHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+ ++ + L+ AGA+++ ++ Sbjct: 330 --MPSAEEEFTAAKKALQKAGAEVIPVT 355 >gi|260426971|ref|ZP_05780950.1| amidase [Citreicella sp. SE45] gi|260421463|gb|EEX14714.1| amidase [Citreicella sp. SE45] Length = 442 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 128/493 (25%), Positives = 206/493 (41%), Gaps = 65/493 (13%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS+ M+ +E + +I V L S++ I + Y + ++A A AE + Sbjct: 1 MSDWTGMSAAELGQAIGKGEIDPVALAQSFLDKIGAHPLKDRIYARLTPERALAEAEAAR 60 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G R L+G+PI KD F T G+ T+A S +L G P ++ V + G V L Sbjct: 61 DRAAAGQRRSPLDGVPISWKDLFDTAGVATEAGSKLLAGRIPDEDAEVLKVATAMGLVCL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK +M E A P+ + S++ D G SSG +++ G L AA IG+D Sbjct: 121 GKTHMSELAFSGLG----LNPMTATPPSVNDADAVAGGSSSGAAASVAFG-LAAAGIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGS+R P+ + VG+K T GR S G++ A D G + RTV D+A++ AI G Sbjct: 176 TGGSVRIPSCWNDLVGLKTTSGRVSLKGVVPLAVGFDTVGPLCRTVEDAALVFAAIEGRT 235 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 D T S++G + D L +++ ++ L AGA+I Sbjct: 236 APDLT-------------GASVEGKRFARLRTIVEDDLRAEPAAGYERALAKLTGAGAEI 282 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK------DILEMYENTRSI 353 V++ +P + I+ EA + +G +E I E +E+ RS+ Sbjct: 283 VDLEVPEVAIPMADAGILYTGEAWA--------LWGEVIEADPEAMFAPIRERFESGRSV 334 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 + Y+RA R + R+ G D +L PT P Sbjct: 335 SA---------------------ADYIRAWN-RMIAAREAWAKATAGFDAVLCPTAPI-- 370 Query: 414 FPLGKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P + G ++ ++ T N+ G +++P + G+ L+ P Sbjct: 371 LPPNVAKLLEGGDYYVTENLLALRNTRVGNVMGTCTLTLPTGVPS----CGISLMCPPDD 426 Query: 470 EETLFSVGQIIEK 482 E+ L +G EK Sbjct: 427 EDRLLRLGAGAEK 439 >gi|222110029|ref|YP_002552293.1| amidase [Acidovorax ebreus TPSY] gi|221729473|gb|ACM32293.1| Amidase [Acidovorax ebreus TPSY] Length = 467 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 122/498 (24%), Positives = 204/498 (40%), Gaps = 47/498 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++ SE RS+ IS V+ + + + + A + + A A A +S+ Sbjct: 1 MTQLHELSASELLAGYRSRQISPVDALLDVLSHVARWEPHLQATYLLRPEAALAQARQSE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G L+G+P+ +KD AT+G T + L ++ +L + GAV+L Sbjct: 61 ARWLRGAPCGPLDGVPVTLKDNIATQGDPTPLGTAALPLVPAAADAPPAARLREAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M ++ M SS +S++ +PW SS G+ AA A +GTD Sbjct: 121 AKTTMPDYGMLSSGLSSFHPLARNPWDLSKGPGG-----SSAGAGAAAAAGYGPLHVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD--QAGIITRTVRDSAILLKAIAG 237 GGS+R PAS+ G +KP+ GR I P AG +TR V D+A++++ ++ Sbjct: 176 IGGSLRLPASWCGIFTLKPSLGR------IPIDPPYTGRAAGPMTRGVEDAALMMQVLSQ 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D+ + D+ R L+P + + L DAG Sbjct: 230 PDARDSMSLPAQPIDWLR---------------------LAPGTQRLRGLRLGLLLDAGC 268 Query: 298 KIV------EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + Q A I+ P E A DG+ + R+ + + R Sbjct: 269 GLATDPEVRAAVQAAAQRLADAGAIVEPMEPFLTRAMLDGMDHFWRMRS------HMDMR 322 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ Q K I + S+ ++ + + R T G D +L+P P Sbjct: 323 TLTVEQRGKVLPYIRAWADSAATLNAAQVYEASQQFHATRVATVRACAGYDYVLSPVAPI 382 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +AF + + + FTV NM+ PA SV +P+GLQ+ GQ F + Sbjct: 383 TAFAAELPSPTDDPLRPLEHIAFTVPFNMSEQPAASVNCGYNASGLPIGLQIAGQRFDDL 442 Query: 472 TLFSVGQIIEKEAGYFRP 489 + + E+ G RP Sbjct: 443 GVLQLAHAFEQLRGAQRP 460 >gi|209517394|ref|ZP_03266236.1| allophanate hydrolase [Burkholderia sp. H160] gi|209502161|gb|EEA02175.1| allophanate hydrolase [Burkholderia sp. H160] Length = 616 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 117/411 (28%), Positives = 175/411 (42%), Gaps = 37/411 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD G+ T A + P + +L D GA+++GK N+D+FA G Sbjct: 76 LFGVPFAVKDNIDVAGMPTTAACDAF-AYTPAASAFAVDRLLDAGAILIGKTNLDQFATG 134 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +G V R +S D GGSS GS+ VA L A S+GTDT GS R PA F Sbjct: 135 LVGTRSPFGAV----RQFES-DAHISGGSSSGSAIVVAAGLAAFSLGTDTAGSGRVPAGF 189 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KPT G S+ G++ SLD I V D+ +L +A YD D +P Sbjct: 190 NELVGLKPTPGLVSKRGVVPACRSLDCVSIFAHDVGDAWEVLLQMAKYDGDDGYARRVP- 248 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 AL + + +P++ L +L D+ Q + D A + +S Sbjct: 249 -----ALGLPHAPLRLAVPEQ--LTFLG---DRQAHQAFAATLDTIASRLALS------- 291 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 P P + ++ L YDG E + L + T V I Sbjct: 292 -PINVPFEPMQRTAAL-LYDGPWVA---ERRAALGSFFETNRADIDPVVAEVIAKADGYS 346 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 + ++ Y A ++R+ FE +DV++ PTTPT P E + Sbjct: 347 AVDAFNGQYALAA-----LRREVETLFE-AIDVLIVPTTPTH--PTFDEVRADPIGANSQ 398 Query: 431 NDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 V+T VN+ L A++VP +P G+ LI ++ L +G I+ Sbjct: 399 LGVYTNFVNLLDLCALAVPGVRRADGLPAGVTLIAPAGADQRLAVLGARIQ 449 >gi|121593308|ref|YP_985204.1| amidase [Acidovorax sp. JS42] gi|120605388|gb|ABM41128.1| Amidase [Acidovorax sp. JS42] Length = 467 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 122/498 (24%), Positives = 203/498 (40%), Gaps = 47/498 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L+ ++ SE RS+ IS V+ + + + + A + + A A A +S+ Sbjct: 1 MTQLHELSASELLAGYRSRQISPVDALLDVLSHVARWEPHLQATYLLRPEAALAQARQSE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G L+G+P+ +KD AT+G T + L ++ +L + GAV+L Sbjct: 61 ARWLRGAPCGPLDGVPVTLKDNIATQGDPTPLGTAALPLVPAAADAPPAARLREAGAVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M ++ M SS +S++ +PW SS G+ AA A +GTD Sbjct: 121 AKTTMPDYGMLSSGLSSFHPLARNPWDLSKGPGG-----SSAGAGAAAAAGYGPLHVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD--QAGIITRTVRDSAILLKAIAG 237 GGS+R PAS+ G +KP+ GR I P AG +TR V D+A++++ ++ Sbjct: 176 IGGSLRLPASWCGIFTLKPSLGR------IPIDPPYTGRAAGPMTRGVEDAALMMQVLSQ 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D D+ + D+ R L+P + + L DAG Sbjct: 230 PDARDSMSLPAQPIDWLR---------------------LAPGTQRLRGLRLGLLLDAGC 268 Query: 298 KIV------EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + Q A I+ P E A DG+ + R+ + + R Sbjct: 269 GLATDPEVRAAVQAAAQRLADAGAIVEPMEPLLTRAMLDGMDHFWRMRS------HMDMR 322 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ Q K I + S+ + + + R T G D +L+P P Sbjct: 323 TLTVEQRGKVLPYIRAWADSAATLSAAQVYEASQQFHATRVATVRACAGYDYVLSPVAPI 382 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +AF + + + FTV NM+ PA SV +P+GLQ+ GQ F + Sbjct: 383 TAFAAELPSPTDDPLRPLEHIAFTVPFNMSEQPAASVNCGYSASGLPIGLQIAGQRFDDL 442 Query: 472 TLFSVGQIIEKEAGYFRP 489 + + E+ G RP Sbjct: 443 GVLQLAHAFEQLRGAQRP 460 >gi|77359858|ref|YP_339433.1| allophanate hydrolase [Pseudoalteromonas haloplanktis TAC125] gi|76874769|emb|CAI85990.1| putative allophanate hydrolase [Pseudoalteromonas haloplanktis TAC125] Length = 525 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 132/500 (26%), Positives = 214/500 (42%), Gaps = 58/500 (11%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE-----SDKRI 63 +S D LR DIS +EL DS I E +N+ +N ++AR A++ + +R Sbjct: 53 MSTMADLLRQGDISPLELTDSAIARFE-TNAALNMIAVNHFEQAREQAQKLNQLSTAQRT 111 Query: 64 INGDARDLEGIPIGIKDCFATKG--IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + L G+P +KD T I T C D ST+ + G ++ K Sbjct: 112 AKMASAPLLGVPFALKDLGVTMAGTITTNGCRFFKDNCVAE-NSTLVNRYQAAGLNIMAK 170 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 L EF + E+S +G ++PW + +++ GGSS GS+ AVA + A+ G+D G Sbjct: 171 LTSPEFGQTPTGESSLHGDTLNPWDT-----RYSSGGSSAGSAVAVAARILPAAHGSDGG 225 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS--LDQAGIITRTVRDSAILLKAIAGYD 239 GSIR PAS G G+KP+ GR + G + S L +TR+VRDSA+LL+ G + Sbjct: 226 GSIRIPASHCGLFGLKPSRGRVAS-GPTNLESSMGLSVHHALTRSVRDSALLLQLTQGAE 284 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWLKD 294 + V LP + A++ + + + + + + Y S +DKT + L Sbjct: 285 P--GSRVTLPNDNMLAAVNAKPKPLKIALMQSHPFGYPVHQDCSDALDKT----VKLLTS 338 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G IVE++ P LP + + +++ + V+ R + Sbjct: 339 LG-HIVEVAQP----TLPLEQMFNGMGIATSSGMLNAVQ----------------ARELK 377 Query: 355 FGQEVKHR----IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 G+ + I+ G + L AR + F + F D ILTP T Sbjct: 378 LGRAARENEFEAIVWGHLQRAKEFTAQQMLAARSAFDQGGQAF-DVFFNDYDFILTPVTT 436 Query: 411 TSAFPLGKEENNSGSMGHIYNDV----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 +G+ N + + NM GLPA+SVP + +P+G+Q G Sbjct: 437 APPPKIGELSLNQPYDSFVQQVLKASPIAALFNMTGLPAMSVPLHWNKNGLPIGVQFAGA 496 Query: 467 PFREETLFSVGQIIEKEAGY 486 E L ++ +E+ A + Sbjct: 497 YGSEAQLLTLAAQLEQAAPW 516 >gi|167813686|ref|ZP_02445366.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei 91] Length = 163 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 1/138 (0%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + NG+ Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARD-LNAFVHVDAELTLAQAKAADAALANGE 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 AGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPW 145 AMGSSNE S +GPV +PW Sbjct: 124 AMGSSNENSAFGPVKNPW 141 >gi|146343576|ref|YP_001208624.1| allophanate hydrolase [Bradyrhizobium sp. ORS278] gi|146196382|emb|CAL80409.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) [Bradyrhizobium sp. ORS278] Length = 600 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 123/442 (27%), Positives = 193/442 (43%), Gaps = 50/442 (11%) Query: 50 QKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ 109 +A A AE + A L G+P+ +KD G+ T A + P +ST Sbjct: 48 DEAEALAEADSLLGKDPAALPLYGVPVAVKDNIDVAGLPTTAACPAF-AYTPTRDSTAVA 106 Query: 110 KLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAG 169 +L GA+++GK N+D+FA G S YG +P R PGGSS GS+ AV+ Sbjct: 107 RLRAAGAIIIGKTNLDQFATGLVGARSPYGIPKNPVRG-----DLVPGGSSSGSAVAVSA 161 Query: 170 FLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSA 229 L S+GTDT GS R PA VG+KP+ G S G++ +LD + + TV D+ Sbjct: 162 GLVPLSLGTDTAGSGRVPAMLNNIVGLKPSLGMISTTGLVPACRTLDCISVFSLTVDDAV 221 Query: 230 ILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 L + D+ D + P+ A+ +G+ +G+P+ +L + DK + Sbjct: 222 TALSVMTAPDQLDPFSRDRPL----AAVTTFPKGVKLGVPRPGQLIFFG---DKAAEAAY 274 Query: 290 SW----LKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 GA++VE L P + A Y E RY +R L D Sbjct: 275 GAAAARFVKLGAELVEFDLEPFYETARLLY------EGPWVAERYLVIRDLL---ASDPD 325 Query: 345 EMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 ++ TR I G G ++ + + Y R + +R + +R F E +D + Sbjct: 326 AIHPVTREITIG---------GARGSAADTFAALY-RLQALRKVAERTFGE-----IDAM 370 Query: 405 LTPTTP---TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 L PT P T+A L + +G +T VN+ L ++VPAA+ +P G+ Sbjct: 371 LLPTAPTAYTTAEVLADPILLNSRLG-----TYTNFVNLLDLCGLAVPAAMRGDGIPFGV 425 Query: 462 QLIGQPFREETLFSVGQIIEKE 483 L+ R+ L S+G+ + Sbjct: 426 TLLAPAGRDAALASLGRAFHAD 447 >gi|167647382|ref|YP_001685045.1| amidase [Caulobacter sp. K31] gi|167349812|gb|ABZ72547.1| Amidase [Caulobacter sp. K31] Length = 543 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 128/435 (29%), Positives = 200/435 (45%), Gaps = 49/435 (11%) Query: 71 LEGIPIGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +KD + G T A S L ++ + ++L D G V+LGK N+ E+A Sbjct: 117 LHGVPILLKDNIESADGTATTAGSLALKDNVTGRDAPLVKRLRDAGMVILGKSNLSEWAN 176 Query: 130 GSSNETSYYGPVISPWRSMDST-------DKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 S + IS W ++ T D+ GSS GS AAVA L A+IGT+T G Sbjct: 177 IRSGHS------ISGWSAVGGTVRNPYVLDRSA-CGSSSGSGAAVAAGLAPAAIGTETDG 229 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+ PA+ G VG+KPT G SR I+ + S D AG +TRTV D+A++L AIAG D D Sbjct: 230 SVTCPAAINGLVGLKPTVGLVSRTHIVPISHSQDTAGPMTRTVLDAALILTAIAGSDPAD 289 Query: 243 ATC--VNLPVPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 A + DY + L + +++G+T+ + + Y SP D ++Q + LK GA + Sbjct: 290 AATKEADAHKTDYAKGLSKDALKGVTLAVARFYTGS--SPGTDAVFEQALKDLKAQGATL 347 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG----- 354 +E+ A ++ E +L Y ++V+ + + ++ ++ Sbjct: 348 IEVKDFDEAPIGKAEGVVLYTELKVDLNAYLASTDPMKVKTRTLADLIAFNKATPKELEW 407 Query: 355 FGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPT----- 408 FGQE + ++ YD Y++A + A +G+D IL T Sbjct: 408 FGQESFEKAE------ATNGYDDPAYIKAAADAKRL------AGPEGIDKILKDTGAIAI 455 Query: 409 -TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 PT+ + N G Y T +AG P ++VP +P+GL IG Sbjct: 456 VAPTTGPAWTIDPLN----GDHYGGSSTTLPAVAGYPHLTVPMGEV-GGLPVGLSFIGPA 510 Query: 468 FREETLFSVGQIIEK 482 + E L +G E+ Sbjct: 511 WSEARLLGLGYAYEQ 525 >gi|237801445|ref|ZP_04589906.1| amidase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024304|gb|EGI04361.1| amidase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 483 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 121/480 (25%), Positives = 199/480 (41%), Gaps = 45/480 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R ++S EL+++ I +E +NA E + ++AR A E+ R + G+P Sbjct: 20 VRKGEVSPSELLETAIARVEQVEPSLNAVCEKLYEQARGQATENSVR-----QGVMAGVP 74 Query: 76 IGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD F C S L FR + + +L G ++G EF + S E Sbjct: 75 TLVKDMFTPMAGARMTCGSRALGEFRSDIDCEIVSRLRRAGCQLIGTTTAPEFGVSYSTE 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW ++D + + GG++ +A F + G D GGS+R PAS G Sbjct: 135 SQRFGATRNPW-NLDYSAGGSSGGAAALVAARAIPF----AHGNDGGGSLRVPASCCGVF 189 Query: 195 GIKPTYGRCSRLGIISFA-PSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G KP+ G ++ L A IT +V DSA LL A AG D +P + Sbjct: 190 GFKPSRGLLPSGPMVGEGWAGLGTAHAITLSVGDSAALLDATAGIDSGAPYAAPMPPTSF 249 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 RA+++ + + + + + P Q + L+ G +V +LP LP Sbjct: 250 SRAVEREPKRLKIALISTLSPWHAEPEALAALQHTAALLESLGHYVVPTTLP---VRLPE 306 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ-EVKHRIMIGTYVLSS 372 + A +D + G +G LE+ R E++ R + +L Sbjct: 307 FLD----------ATFDII--GSHTQG--YLELLGKMRGFPVAMDELEPRTRV---ILRE 349 Query: 373 R--CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS----- 425 R + Y+ A + + R FE D++LTPT + LG+ + S Sbjct: 350 RGQLPATRYISAVESMHALGRAMAGFFED-YDIVLTPTLNRAPPRLGELAFDDDSRSLQD 408 Query: 426 ---MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + H Y+ +T N G PA+SVP +PLG + E TL S+ +E+ Sbjct: 409 FIALSHSYSP-YTALFNATGQPAMSVPLYWTADSLPLGSHFAARFGDELTLLSLAAQLER 467 >gi|229488807|ref|ZP_04382673.1| 6-aminohexanoate-cyclic-dimer hydrolase [Rhodococcus erythropolis SK121] gi|229324311|gb|EEN90066.1| 6-aminohexanoate-cyclic-dimer hydrolase [Rhodococcus erythropolis SK121] Length = 475 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 13/236 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++S D+SA E+++ + ++ N +NA V++++ A E + +G L+G+P Sbjct: 17 IKSGDVSAKEVLEFSLDRLDERNPAVNA---VISERREEARNEVSGGLPDGP---LQGVP 70 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD G+ + S + +ST+ ++ G V++GK N EF +S E Sbjct: 71 FVIKDLGMDVAGLPSTNGSRLFADAVAEKDSTLVERYRQAGLVVIGKTNTPEFGKNASTE 130 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +GP +P+ + D+ +PGGSSGG++ AVA + +D GGSIR PAS G V Sbjct: 131 PALFGPTRNPY----ALDR-SPGGSSGGTAVAVAVGIVPGGHASDGGGSIRIPASACGLV 185 Query: 195 GIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+KP+ GR + F+ + +TR+VRD+A+LL AG D + P Sbjct: 186 GLKPSRGRTPTAPARTLFSSPMSVHHALTRSVRDTALLLDLSAGPTVGDPYVILAP 241 Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 15/95 (15%) Query: 396 AFEQGVDVILTPTTPTSAFPLGKE---------ENNSGSMGHIYNDVFTVAVNMAGLPAI 446 AF D++LTPT A PLG E+++G G T N +G PAI Sbjct: 371 AFFVDHDLLLTPTMARPAAPLGLLDTANPMSIWEHSAGYSG------LTSPFNSSGQPAI 424 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S+P +P+G+QL+G RE+ L V +E Sbjct: 425 SLPMGHDSAGVPIGVQLVGAFGREDLLIQVASQLE 459 >gi|27380917|ref|NP_772446.1| amidase [Bradyrhizobium japonicum USDA 110] gi|27354083|dbj|BAC51071.1| bll5806 [Bradyrhizobium japonicum USDA 110] Length = 461 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 129/494 (26%), Positives = 210/494 (42%), Gaps = 60/494 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIE----VVAQKARAAAEESDK--- 61 +S+S R R+ + S ++AIE + ++ A E + + A EE K Sbjct: 1 MSQSVARSRTNHETIARNSSSALEAIETAYDRIEAERERNCWIYLRPREEALEECRKLVA 60 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 R G+ L GIP G+KD +G+ T A + P + + ++L GA+ LGK Sbjct: 61 RARTGENLPLLGIPFGVKDNIDVEGMPTTAACPAFS-YTPWHSAHSVERLTAAGAICLGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G S S +GP S + ++ GGSS GS+ AVA A ++GTDTG Sbjct: 120 TNLDQFATGLSGARSPHGPCASV-----ADARYVSGGSSSGSAVAVAAGHVAFALGTDTG 174 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA F VGIKPT G S G++ P++D + TV D +++ I G+D Sbjct: 175 GSGRIPAGFNNIVGIKPTVGLVSSRGLVPNCPTIDCVSVFCNTVSDGEAIIEIIEGFDFE 234 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS---------PTIDKTWQQGISWL 292 D P RA G +R ++ P + +++ Sbjct: 235 D------PYSRVPRAFS-----FATGTVPSFRFGRIASADLECFGMPECGELYERACERF 283 Query: 293 KDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 G +E+ P Q + AE S +A + ++ +L++ TR Sbjct: 284 TQIGGTAIEVDFAPFRQAGELMFSGPWVAERHSAIASL------MDIDSGSLLDV---TR 334 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ G + I T+ R H LR RD EA +D ++ PT P Sbjct: 335 TV-LGSAAGYS-AIDTFGAIHRL---HRLR---------RD-AEAIFACIDALVVPTAP- 378 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 F L + + + ++ + ++ N+ L ++VP A MP+G+ L+ + + Sbjct: 379 RPFTLEEMDRDPITLNNRLG-YYSYFANLLDLCGVAVPNATLPNGMPMGVTLLAPAWHDR 437 Query: 472 TLFSVGQIIEKEAG 485 L + + E AG Sbjct: 438 ALIGLARRFEASAG 451 >gi|88797921|ref|ZP_01113508.1| amidase [Reinekea sp. MED297] gi|88779118|gb|EAR10306.1| amidase [Reinekea sp. MED297] Length = 483 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 132/497 (26%), Positives = 217/497 (43%), Gaps = 66/497 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQ-------MNAYIEVVAQKARAAAEESDKRIINGDA 68 LR+ +++ E+ Y+ I +++ +N + AQ+ +A + +A Sbjct: 13 LRAGEVTVPEVAQYYVDRIMAEDAEGPNAVLTLNPFWMEDAQRLQAT--------LQNEA 64 Query: 69 RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L GIPI +KD T + A S L ++ + +L + GA++LGK N+ E+A Sbjct: 65 PLLHGIPILVKDNIDTYTMGNSAGSVALKQVPVESDAPIVHRLHEQGALILGKTNLSEWA 124 Query: 129 ----MGSSNETSYYGPVISPWRSMDS------TDKFTPGGSSGGSSAAVAGFLCAASIGT 178 M S +S W S+ +++P GSS GS+AAVA A+IGT Sbjct: 125 NFRCMAS----------VSGWSSLGGQTRNALNTRWSPSGSSSGSAAAVAAGFAVAAIGT 174 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 +T GSI P++ G +G+KP GR SR GII A S D AG +TRTVRDSAI+L AI+G Sbjct: 175 ETDGSIVSPSAHHGLIGLKPQVGRVSRTGIIPIAWSQDTAGPMTRTVRDSAIILDAISGP 234 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP------TIDKTWQQGISWL 292 D D ++ + L++ G RL +L P + + + + I L Sbjct: 235 DPDDPVTLSAENILEKNLLNECNASSLSG----RRLGFLKPDEQFGTEVHEAFPRVIEQL 290 Query: 293 KDAGAKIVEIS-LPHTQYALPAYYIISPAEASSNLARY------DGVRYGLRVEGKDILE 345 + AGA+ +E+S LP I +E LA Y + L + L+ Sbjct: 291 RQAGAECIELSPLPSLATLQDHEITIMTSEFPEALANYFINRRPESPLKTLADVHRFNLD 350 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 + S+ FGQ R + ++ Y R + D+ + ++ I+ Sbjct: 351 HADTVLSV-FGQTWFDRCLSAPST-QTQMYAEALASIDAFRQEMSEDWF--LKHNLEAIV 406 Query: 406 TPTT-PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 TP+ P + +G H+ ++G P+I+VP + + PLG + Sbjct: 407 TPSNGPAWLIDHQHGDRYTGGNSHL--------AAVSGWPSITVPYTESDGR-PLGALFV 457 Query: 465 GQPFREETLFSVGQIIE 481 ++E L ++ E Sbjct: 458 APAWQEARLLNIAFAFE 474 >gi|313890126|ref|ZP_07823761.1| Amidase [Streptococcus pseudoporcinus SPIN 20026] gi|313121487|gb|EFR44591.1| Amidase [Streptococcus pseudoporcinus SPIN 20026] Length = 485 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 130/528 (24%), Positives = 223/528 (42%), Gaps = 94/528 (17%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F +E +R+ ++ +ELV+ I N +NA +V+++ A EE+ R + Sbjct: 4 FKDATEMAHAVRTHRVTPLELVEETIAQANKHNPNLNA---IVSRRYEEAREEARTRDFS 60 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAVMLGKL 122 G+PI IKD + +L F+ +Y S QKL D G ++LG Sbjct: 61 N--LPFAGVPIFIKDLGQSLTGSLATSGSVL--FQKNYARVTSRYVQKLQDLGFIILGTT 116 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ EF + +++ G V P+ + + G ++ +S + S +D GG Sbjct: 117 NVPEFGFKNISDSKANGAVNLPFDLSRNAGGSSGGAAALMTSG-----ITVISAASDGGG 171 Query: 183 SIRQPASFTGTVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLK 233 SIR PASF G +G+KP+ GR + + FA +T++VRD+ L Sbjct: 172 SIRIPASFNGLIGLKPSRGRIPTGPDSYRGWQGASVHFA--------LTKSVRDTKTFLF 223 Query: 234 AIAGYDECDATC-VNLPVPDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISW 291 + EC LP+ + + +T+ I KE S +++ ++ ++ Sbjct: 224 HM---QECQFEGPFPLPLLSEDALFNTKTSSLTIAILSKEVDGRPFSDEVNRALEETANF 280 Query: 292 LKDAGAKIVEI-SLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 L+ G I + SLP AL +YY ++ AE + A +D ++ L G+ + + Sbjct: 281 LEKKGHTITWLASLPLDMDALIDSYYFMNAAETA---AMFDDIKQAL---GRSLTKNDME 334 Query: 350 TRSIGF---GQEVK---HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 T + GQ +K + +I + L S C AR F + D+ Sbjct: 335 TMTWAIYQAGQNLKAKDYSKVISEWDLYSACM------AR-------------FHKEYDL 375 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYN-----------------------DVFTVAVNM 440 ++TPTT A G+ +++S M + + +T N+ Sbjct: 376 LITPTTHDIAPKHGQLDSDSDLMAKLAQAESYTSKEQLQLVKEMFKKGLALNPYTPLANL 435 Query: 441 AGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 G PAI++P +L PLG+Q + RE+ L V + E EAG F+ Sbjct: 436 TGQPAITLPLSLVNHNYPLGIQFMAAKGREDLLLQVASLFE-EAGRFK 482 >gi|170782696|ref|YP_001711030.1| allophanate hydrolase [Clavibacter michiganensis subsp. sepedonicus] gi|169157266|emb|CAQ02451.1| allophanate hydrolase [Clavibacter michiganensis subsp. sepedonicus] Length = 593 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 123/432 (28%), Positives = 184/432 (42%), Gaps = 62/432 (14%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDG--FRPHYESTVTQKLWDNGAVMLGKLNM 124 DA L G+ I +KD G T A L G + P + V +L GAV++GK N+ Sbjct: 68 DALPLAGLVIAVKDNIDAAGFPTTAA---LPGSAYTPAESAPVVARLEAAGAVVVGKTNL 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+ A G S YG V R + + G SSG + A G + AA +GTDT GS Sbjct: 125 DQLATGLVGTRSPYGEV----RGAADPELVSGGSSSGSAVAVALGIVDAA-LGTDTAGSG 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA++ VGIKPT G G++ APS D + RT+ + + +AG D+ D Sbjct: 180 RVPAAYNRLVGIKPTLGLLPARGVVPAAPSYDTVTVFARTLGLAERVAGVMAGVDDADPA 239 Query: 245 CVNLPVPDYERALDQSIQGMTV---GIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P D + V +P + L +SP + + + ++ L DAG +IVE Sbjct: 240 SRPWPA-------DAPLSAAPVLHLAVPVDADLAPMSPEWRRAFDRTVALLADAGVQIVE 292 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE--GKDILEMYENT-----RSIG 354 + I+P A++ YDG R + G + E T R IG Sbjct: 293 VD-------------IAPLLAAAA-LLYDGALVAERTQAVGHLLAGTPEGTDPSVARIIG 338 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G K + + V + H L AR+I GVD +L PT P Sbjct: 339 SGS-AKTAVEL---VADQQTLRRHRLDARRILA------------GVDALLLPTAPGHP- 381 Query: 415 PLGKEENNSGSMG-HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + E + +G + + +T VN+ L AI+VP + + P G+ L+G F + L Sbjct: 382 --SRAEVAADPIGVNSWVGTYTNFVNLLDLAAIAVPGPDADGR-PFGVTLVGPAFSDAAL 438 Query: 474 FSVGQIIEKEAG 485 +++ G Sbjct: 439 VDAAGRLQRTIG 450 >gi|302307478|ref|NP_984147.2| ADR051Cp [Ashbya gossypii ATCC 10895] gi|299789020|gb|AAS51971.2| ADR051Cp [Ashbya gossypii ATCC 10895] Length = 1819 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 112/414 (27%), Positives = 176/414 (42%), Gaps = 48/414 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD +G+ T A + ++T + L D GAV+LGK NMD+FA G Sbjct: 72 LYGVPVAVKDNIDVRGLATTAACPSF-AYTAAQDATAVRLLRDAGAVILGKTNMDQFATG 130 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG V S + S + + G + + AV ++GTDT GS R PA+ Sbjct: 131 LVGTRSPYGSVASAFSSAHAAGGSSSGSAVVVARGAVP-----LTLGTDTAGSGRVPAAL 185 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KPT G S G++ SLD + R V D+ L+ +A D D P Sbjct: 186 NNLVGVKPTRGTVSCTGVVPACRSLDCVSVFARDVADAHRCLRILARPDGSDPYSRPSPA 245 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 D R VG+P+E + + + ++ AGA++VE+ Sbjct: 246 -DAPRRFGTC---PVVGVPREAEW-FGESQNAELFAAACQRMRAAGARVVEVD------- 293 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI--MIGTY 368 + +L R EG + E Y R+ GQ + + + Sbjct: 294 ---------PQPLLDLGRS-------LYEGPWVAERYAAMRAFYSGQPPRDTLDPTVTGI 337 Query: 369 VLSSRCYDS-----HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + S+ Y + H LR +K+ I EA GVD +L PT P + P Sbjct: 338 ITSAGGYSAADVFDHGLRRQKLVAAI-----EAELAGVDALLVPTCPLN--PTLAAIAAE 390 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + + ++T VN+A L A+++PA +P G+ L+G+ F + L +G Sbjct: 391 PLLVNARQGMWTNFVNLADLAAVAIPAGFRRDGLPQGVTLVGRKFSDLALLELG 444 >gi|52143496|ref|YP_083334.1| amidase [Bacillus cereus E33L] gi|51976965|gb|AAU18515.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus cereus E33L] Length = 536 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 135/268 (50%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVAADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFSEKELFNIGYAYEQQSKNRKPPK 535 >gi|307331933|ref|ZP_07611028.1| Amidase [Streptomyces violaceusniger Tu 4113] gi|306882407|gb|EFN13498.1| Amidase [Streptomyces violaceusniger Tu 4113] Length = 474 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 137/487 (28%), Positives = 220/487 (45%), Gaps = 56/487 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L ++++ LV+ + I + +NA+ + A+ A A E+D+R+ G+ L G+P Sbjct: 16 LAGGEVTSHALVEQALGRIAETQPTLNAFRRIRAEAALREAAEADRRLAAGERLPLLGVP 75 Query: 76 IGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD G T CS D + ++L GAV++GK N E E Sbjct: 76 LAVKDDTDVAGEPTAFGCSG--DFPAKVEDGEAVRRLRAAGAVIVGKTNTPELGQWPFTE 133 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +PW ++TPGGSSGG++AAVA L A++G+D GS+R PA++T + Sbjct: 134 GPAFGDTRNPW-----NPEYTPGGSSGGAAAAVAAGLVPAALGSDGAGSVRIPAAWTHLI 188 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 GIKP GR S + G + RTV D+A+LL A++G E D C PV D Sbjct: 189 GIKPQRGRISTWPDAESFNGITCHGPLARTVADAALLLDAVSGNCEGDLHCPE-PV-DVL 246 Query: 255 RALDQ---------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 A+ + S + G PK RLD P + + + L G ++V Sbjct: 247 SAVGRDPGRLRIALSFKPAFTGTPK--RLD---PLVRASVVRLAERLAALGHEVVAA--- 298 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 +Y L + + A++ L + G RV +L++ TR R++ Sbjct: 299 EPRYGLVGFSFLP--RATAGLFEWSG-----RVPDPLLLDI--RTRHAAR----NGRLLG 345 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG- 424 G + +R Y+ ++R F++ DV+L+PTT T +G SG Sbjct: 346 GAALRWARSYEEP----------LRRQVGAIFDR-FDVVLSPTTATPPLRIGAMAALSGW 394 Query: 425 --SMGHIYNDVFTVAVNMAGLPAISVPAALC--EKKMPLGLQLIGQPFREETLFSVGQII 480 I + N+ G PA++VPA E+ +PLG QL+G E L S+ + Sbjct: 395 QTDRAMIAACPYAWPWNVLGWPAMNVPAGFADPERTLPLGAQLLGPANSEPVLISLAAQL 454 Query: 481 EKEAGYF 487 E + ++ Sbjct: 455 EADQRWY 461 >gi|197104666|ref|YP_002130043.1| 6-aminohexanoate-cyclic-dimer hydrolase [Phenylobacterium zucineum HLK1] gi|196478086|gb|ACG77614.1| 6-aminohexanoate-cyclic-dimer hydrolase [Phenylobacterium zucineum HLK1] Length = 467 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 133/485 (27%), Positives = 208/485 (42%), Gaps = 62/485 (12%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIK 79 ++SA EL+D+ + + N ++NA ++ AR AA S L G+P +K Sbjct: 22 EVSAGELLDAAVTRMAEVNPRINAVTLDLSDVARTAAPGSGP---------LAGVPFLLK 72 Query: 80 DCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D AT G T S + +S T+ G + GK N EF + E+ + Sbjct: 73 DLGATLAGTVTSGGSKLFADAAAEADSATTRLYKAAGLNIFGKTNTPEFGLWPVTESEHL 132 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PW + SSGG++AAVA + A+ +D GGSIR PA+ G G+KP Sbjct: 133 GVCRNPWDLARTPGG-----SSGGAAAAVAAGIVPAAHASDGGGSIRTPAACCGLFGMKP 187 Query: 199 TYGRCSRLGIISFAP--------SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 + GR +SFAP S+ A +TR+VRDSA LL A+ D + P Sbjct: 188 SRGR------VSFAPQGEGWAGASVQHA--VTRSVRDSAALLDAVCAPQPGDPYFLPPPE 239 Query: 251 PDYERALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + A + + +G + L P + + +D G + E+ +P Sbjct: 240 RPFLEAAGRDPGRLRIGFTTAALQSQALDPECAEAVRDAAKLCEDLGHAVEEVKVPGDFP 299 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 A+ +A++ L V L E + R +G G EV+ + + TY Sbjct: 300 AM---------QAAAGLVIAASVAANLDAEAE------RRGRPVGKG-EVEG-LTMATYR 342 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK--EENNSGSMG 427 S Y++A RD FE DV+L T A P+G E+ + Sbjct: 343 RGQGVTGSAYVQALATLHAFGRDVAALFET-YDVLLLSTLGRPAIPIGWIFEDRD----- 396 Query: 428 HIYNDVF-----TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 I + +F T N +G PA++VP A + +P+GLQ +G+ E LFS+ +E+ Sbjct: 397 QIADRLFSFMPNTQPFNNSGQPAMTVPLAWSGEGLPIGLQFVGRTGEEAMLFSLAGQLER 456 Query: 483 EAGYF 487 +F Sbjct: 457 ARPWF 461 >gi|146338005|ref|YP_001203053.1| putative amidase [Bradyrhizobium sp. ORS278] gi|146190811|emb|CAL74816.1| putative amidase [Bradyrhizobium sp. ORS278] Length = 491 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 130/504 (25%), Positives = 215/504 (42%), Gaps = 88/504 (17%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 R+R+ +++A EL + I + Q++ +EV A A ++ K N D G+ Sbjct: 21 RVRNGELTAAELAQQAAEGIAKVDPQLSGVVEVFAD----AVDDPIKAGANADG-SFAGL 75 Query: 75 PIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +KD T G + S + G RP ++ +T+K+ G ++G+ EF + SS Sbjct: 76 PFLMKDLGPTMAGRLQEQGSLYMRGNRPAADTHLTKKMRRAGLNLMGRTTTPEFGVCSSA 135 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E +PW TD +T GSS GS+A VA + + TD GGSIR PA G Sbjct: 136 ENPAVYVTRNPW----DTD-YTTCGSSAGSAAMVAAGVVPIAHATDGGGSIRIPAGVNGN 190 Query: 194 VGIKPTYGRCSRLGIISFAPSL-DQAGII------TRTVRDSAILLKAIAGYDECDATCV 246 +G+K SR G+ S AP L D +G++ +R+VRD+A + D C Sbjct: 191 IGLK-----VSR-GVFSIAPHLSDLSGLVSIQGCQSRSVRDTAAFV------DHCRGGAP 238 Query: 247 NLPVP------DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 +P Y + + + + + ++ +P I Q+ +L+ G Sbjct: 239 GEFMPYWTAPEPYVELIKRDPGRLRIALSHQWGDYRATPHIASELQRVGKFLEGLGH--- 295 Query: 301 EISLPHTQYALP--AYYIISPAEASSNLARYDGVRYGLRVEGK------DILE-----MY 347 H YALP Y A+ + ++ + V L + K +++E ++ Sbjct: 296 -----HVGYALPDVDYRAAFAAQTTCYISNFAMVINNLLAQRKLERPPAELIEPINIRIW 350 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 E R F + + + T +SR + AF + D+ILTP Sbjct: 351 EAGRGTSFAERAAMQAVFNT---TSRAFG-------------------AFFEEWDIILTP 388 Query: 408 TTPTSAFPLGKEENNSGS--------MGHIY-NDVFTVAVNMAGLPAISVPAALCEKKMP 458 T +G E + S G+++ N FT N+ G+PA+S+P A E +P Sbjct: 389 ITALPTPKIGTTEYLTISDNPDVLDWFGNLWRNFAFTPLANLCGIPAVSLPLATNEHGLP 448 Query: 459 LGLQLIGQPFREETLFSVGQIIEK 482 LG+Q IG+ + L + IE+ Sbjct: 449 LGIQAIGKQADDGLLLQLAAQIER 472 >gi|300709972|ref|YP_003735786.1| amidase [Halalkalicoccus jeotgali B3] gi|299123655|gb|ADJ13994.1| amidase [Halalkalicoccus jeotgali B3] Length = 480 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 133/499 (26%), Positives = 214/499 (42%), Gaps = 64/499 (12%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD- 67 V++ L ++ ++ E+V Y++ I+ N ++NA I V A A+E D ++ G+ Sbjct: 6 VADIHAALINEHVTIREVVKQYLERIDAYNEELNA-ILTVNPNALDRADELDAKLAAGEF 64 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIP +KD T + T + L+ ++ V +++ GA+++ K N+ E Sbjct: 65 VGPLHGIPTILKDNQNTADMPTTGGAVTLEDSMAPDDAFVVEQMRTVGAIIIAKANLHEL 124 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A G + +S G +P+ ++D T SSGG+ AA+A + GTDT SIR P Sbjct: 125 AGGGTTVSSLGGQTRNPY-ALDRTPGG----SSGGTGAALATNMAPIGFGTDTVNSIRSP 179 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 AS VG++P+ G SR G I A + D G IT++V D+A +L IAGYD D + Sbjct: 180 ASACNLVGLRPSMGLVSREGTIPVALTQDMVGPITQSVADAARILDVIAGYDPEDPSTA- 238 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGI------------------ 289 QG IP+ Y DYL+P K + G+ Sbjct: 239 --------------QGAEY-IPESYT-DYLNPDGLKDTRIGVLRSVFASGPESEPVVEVA 282 Query: 290 ----SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY-DGVRYGLRVEGKD-I 343 L+ GA +EI AL + + E + Y D + G +E + Sbjct: 283 EEAVVDLETLGATTIEIDAEVDVDALIDSFHVGSYEQQAQFNDYLDSLGDGAPIETLEAF 342 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 +E E S+ G E I T ++ Y R R I L + VD Sbjct: 343 VEAGEYDPSLESGLEAALEIESPTD--EPEYFERLYRRNRFIEEL----YDSMAAGAVDA 396 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 + P +G ++ G G + + G +I+VP ++ +P+G++ Sbjct: 397 LFFPHQKQLVAEIG--DDQLGRNGFLSSGT--------GFSSITVPGGFSKEGVPVGVEF 446 Query: 464 IGQPFREETLFSVGQIIEK 482 + +PF E TLF V E+ Sbjct: 447 LCRPFDEPTLFEVAYAYEQ 465 >gi|302896912|ref|XP_003047335.1| hypothetical protein NECHADRAFT_87881 [Nectria haematococca mpVI 77-13-4] gi|256728265|gb|EEU41622.1| hypothetical protein NECHADRAFT_87881 [Nectria haematococca mpVI 77-13-4] Length = 626 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 135/528 (25%), Positives = 217/528 (41%), Gaps = 79/528 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNS----QMNAYIEVVAQKARAAA 56 M+E + +VS+ R S + ++ + + I S A+I+ AA Sbjct: 116 MTEAPYYSVSDYRAMYLSGQATPTDVARALLPLIRRDISPQGKHSTAWIDTKVDLVLKAA 175 Query: 57 EESDKRI-INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT----QKL 111 EES R N L+G+P IKD F G S++ R ++T +KL Sbjct: 176 EESTIRYHQNRSLGPLDGVPAAIKDDFDLDGYDMTMGSNMNYAGRAVKSGSITNWSVRKL 235 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 + G ++LGKL M EF M ++ +G ++P+ + + GGSS G+ AV L Sbjct: 236 QEAGVIILGKLTMHEFGMDTTGNNPNHGTPLNPFNA-----GYYAGGSSSGAGYAVGAGL 290 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 ++G D GGS+R PA++ G+KPT+GR S + APS G + + A + Sbjct: 291 IPIALGGDAGGSLRVPAAYCSVFGLKPTHGRLSSYPTPNPAPSCSVQGPMAADMYSLATV 350 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 + IA P P R + + +G+ + + D T Sbjct: 351 YETIADPHPSS------PFPQLCREPSRPSSKL-LGVYEPWFSCAAMGVQDLTRSLVGKL 403 Query: 292 LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 G IV IS+P + A+ + +A+S L + KDI + Sbjct: 404 CTYYGYTIVPISIPFMEEGQIAHAMTVLTDAAS-----------LLPDTKDITAATKILL 452 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTT 409 ++G R T YL A+K+R+L+ + + ++ G+ +I+TPTT Sbjct: 453 AVG-------RTTPAT----------DYLLAQKLRSLLMQHLSHLWQMYPGM-LIVTPTT 494 Query: 410 PTSAFPL--GKEENNSG-SMGHIYNDVFTVA--VNMAGLPAISVPAALC----------- 453 + P+ G+ E G S G++ + T N GLP+ISVPA Sbjct: 495 ACAGAPIRGGESELKYGVSDGNLTIESMTYVWLANFCGLPSISVPAGFVIPEGQDRAGEE 554 Query: 454 -----EKKMPLGLQLIGQPFREETLFSVGQIIEKEAG----YFRPHKW 492 E K+P+GL G+ E+ L G ++ EA RP W Sbjct: 555 ADEKTEGKVPIGLMATGEWCSEKALLDFG--VDAEAAGSERRCRPPIW 600 >gi|239831434|ref|ZP_04679763.1| Indoleacetamide hydrolase [Ochrobactrum intermedium LMG 3301] gi|239823701|gb|EEQ95269.1| Indoleacetamide hydrolase [Ochrobactrum intermedium LMG 3301] Length = 430 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 122/235 (51%), Gaps = 19/235 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S I P ++ + ++L + GAV++GK +M EFA Sbjct: 53 LDGRIVSIKDLFDIAGEPTLAGSVIRRDAAPATRDAAIVRRLREAGAVIVGKTHMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D T PGGSS G++ + A +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPTR--IPGGSSSGAAVSAAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D AIL AI + Sbjct: 168 LNGLVGFKPTARRIPLDGAFPLAPSLDSVGPLTRTVAD-AILTDAIMAGE---------- 216 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 P AL S++G+ + +PK Y L + P + K ++ ++ L+ AGA I ++ + Sbjct: 217 TPVLPEAL--SLKGLRIALPKGYLLADMEPDVVKHFEATVALLEKAGAVIADLGV 269 >gi|301631803|ref|XP_002944984.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Xenopus (Silurana) tropicalis] Length = 503 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 124/471 (26%), Positives = 210/471 (44%), Gaps = 39/471 (8%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 RSK++S VE++ S I IE Q++A ++A A S R G R L+G+P Sbjct: 18 RSKELSPVEVMRSVIARIEALEPQLHATWLFRPERALEQACASQARWHAGRPRGALDGVP 77 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD AT G + D +S +L + GAV++ K M + M SS + Sbjct: 78 LTLKDNLATAGDPMPLGTAAYDLTPMAQDSPPAARLREGGAVLVAKTTMPDLGMLSSGLS 137 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +++ +PW TPGGSS G+ AA A +GTD GGS+R PAS+ G Sbjct: 138 TFHALSRNPW-----NLSRTPGGSSAGAGAAAAAGYGPLHVGTDIGGSLRLPASWCGIYT 192 Query: 196 IKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 +KP+ GR I AP + + AG +TRTV D+A+L++++A DE D + + D+ Sbjct: 193 LKPSAGR-----IPLSAPYMGRCAGPMTRTVADAALLMQSVAQPDERDYSELPPAAIDWA 247 Query: 255 R-ALDQS-IQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 A++ S + G VG+ + L P I + ++ AGA++ EI T L Sbjct: 248 AFAVEPSFLAGKRVGLLMDAGCGLPLDPQIAAAVHRAAKRIEAAGAQVQEIRPFMTPMML 307 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLS 371 G+ + R+ + R++ + + I + S Sbjct: 308 ------------------QGMDHFWRMRA------LIDIRALPAHKRAQILPYINAWAES 343 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 + + ++ + + R T A Q D +++P +P P + + + + Sbjct: 344 ASGFSGEHIFNAYSQFIATRAATVAATQAYDFVISPVSPNMPAPAEHASPTNDPLLSMEH 403 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 FTV NM+ PA S+ + +P+GLQ+ G+ F + + + E+ Sbjct: 404 IGFTVPYNMSEQPAASINCGYSAEGLPIGLQIAGRRFDDLGVLQFSRAFEQ 454 >gi|291298325|ref|YP_003509603.1| amidase [Stackebrandtia nassauensis DSM 44728] gi|290567545|gb|ADD40510.1| Amidase [Stackebrandtia nassauensis DSM 44728] Length = 424 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 129/472 (27%), Positives = 209/472 (44%), Gaps = 71/472 (15%) Query: 15 RLRSKDIS---AVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD- 70 RLR D + AV + IE +++++ A+ ++ R AE G+ D Sbjct: 6 RLRPLDATPRDAVAEAEYTCDRIEATDAEIFAFESEPDRRGRLLAEAQATEERWGEPADR 65 Query: 71 --LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+G+KD G+ T+A S + ++T+ +L GA++ GK EFA Sbjct: 66 PALYGVPVGVKDVIHVDGLETRAGSKVPAEALAGAQATLVDRLVGAGALIAGKNTCAEFA 125 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 + S GP +P TPGGSS GS+AAVA SIGT T S +PA Sbjct: 126 I------SAPGPTRNP-----HNPTHTPGGSSSGSAAAVAAGQVRLSIGTQTVSSTIRPA 174 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN- 247 ++ G VG KP++GR G+I+ APSLD GI+T V +AI + + DE V+ Sbjct: 175 AYCGIVGFKPSHGRIPVDGVIANAPSLDTIGILTTDVAGAAIASEVLC--DEWSPRAVDE 232 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPV +GIP + L+ S + + ++ LK AG ++V Sbjct: 233 LPV---------------LGIPADEYLECASKPTLARFAEHVAKLKAAGYRVV------- 270 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 P A ++ R V + + R E + + ++ + + ++ G Sbjct: 271 -----------PGRAVTDFPRIRAVLFTIQRYESAIVHAAWFDSYRALYQPKSAQSVLEG 319 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGS 425 + D H L A K+RT I + E+ GVD+ + P+ T P+G Sbjct: 320 RDIDE----DKHQL-ALKLRTAIHDQIRDMMERSGVDIWIGPSA-TDTAPVG-------- 365 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 + N + ++ ++ G+P++SVPA +PLG + +E L + G Sbjct: 366 LASTGNSIMSIPWSLTGMPSLSVPAP--APDLPLGFHCAARTGDDERLLAWG 415 >gi|195149714|ref|XP_002015801.1| GL11255 [Drosophila persimilis] gi|198456487|ref|XP_001360345.2| GA21360 [Drosophila pseudoobscura pseudoobscura] gi|194109648|gb|EDW31691.1| GL11255 [Drosophila persimilis] gi|198135630|gb|EAL24920.2| GA21360 [Drosophila pseudoobscura pseudoobscura] Length = 528 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 127/501 (25%), Positives = 220/501 (43%), Gaps = 56/501 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD------- 67 ++R++++S+V++++S+I+ I+ N +N ++ +A A ++DK I +G Sbjct: 56 KIRNQELSSVQVMESFIRRIKEVNPILNCVVDERYDQALQEAADADKLIKSGQHTVEELA 115 Query: 68 -ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 + G+PI KDC + KG+ A + R ++ + GA+ + N+ E Sbjct: 116 KQKPFLGVPITTKDCISVKGMLHTAGLYDRREVRGSKDADAMALMRKAGAIPIALTNVSE 175 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + + +G R+ T++ GGSSGG + A +G+D GGSIR Sbjct: 176 VCMWWESNNTVHGRT----RNAYDTNRIV-GGSSGGEGCIQSAAASAFGLGSDIGGSIRM 230 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQA------GIITRTVRDSAILLKAIAGYDE 240 PA F G G KP+ S +G AP D+ G ++R D +L+ ++G Sbjct: 231 PAFFNGIFGHKPSKLVVSNVGQFP-APFSDEQNSFLGLGPMSRFAEDLRPMLRIMSGE-- 287 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKI 299 A +NL D E L + + + P + K Q+ + L + G+K Sbjct: 288 -KADLLNL---DKEVDLSKMKFFYQESDGGARLVSSVDPDLQKAMQRVVRHLSEKFGSKQ 343 Query: 300 VE-ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 VE I LP + + ++ A+ G Y L DI +E + + FG Sbjct: 344 VERIQLPLFRQSAAIWF------ANMRDDSGHGFAYQLGNLEHDINTYWELFKWL-FGAS 396 Query: 359 VKHRIMIGTYVL-SSRC------YDSHYLRARK-IRTLIKRDFTEAFEQGVDVILTPTTP 410 I + T ++ S++C YD H +R R +R ++R + V++ PT P Sbjct: 397 KHTFIGLSTAIMDSAQCKHGSPKYD-HMVRKRNDLRAELQRLLGDN-----GVLIYPTHP 450 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T A P E + N +T VN+ G PA +VP + +PLG+Q+I + Sbjct: 451 TVA-PYHNE-----PVTRPLNFAYTGIVNVLGFPATAVPLGKGSEGLPLGVQVIANFNED 504 Query: 471 ETLFSVGQIIEKE-AGYFRPH 490 +V + +E+ G+ RP Sbjct: 505 RLCLAVAEELERAFGGWTRPQ 525 >gi|115386944|ref|XP_001210013.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191011|gb|EAU32711.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 597 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 127/478 (26%), Positives = 209/478 (43%), Gaps = 74/478 (15%) Query: 41 MNAYIEVVAQKARAAAEE-SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGF 99 ++ ++ V + A+A+ + +KR + +G+P +K F G T S L+ + Sbjct: 150 FDSRVDFVLEAAKASTQRYQEKRPLG----IFDGVPTAVKGEFDVDGYKTHLGS--LNDY 203 Query: 100 RPH---YESTVT----QKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD 152 P + ++T ++L D GA+MLGKL+M EF + ++ +YG +P+ D Sbjct: 204 TPEPTEEDPSITNWCVRQLQDAGAIMLGKLSMHEFGLDTTGNNIHYGTPPNPYHP----D 259 Query: 153 KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 +T GGSS G + AV+ L ++GTD GGS+R PAS G+KPT+ R S ++FA Sbjct: 260 YYT-GGSSSGCAYAVSTGLVPIALGTDGGGSVRIPASLCSVAGLKPTHNRLSHYPGVNFA 318 Query: 213 PSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVPDYERALDQSIQGMTVGIPK 270 + G + +R A K +A G D T P P L S +G +G+P Sbjct: 319 STTSVIGPLAADIRSLAEAYKLVATPGPD----TLFPPPGP---IVLSPSAKGKILGVP- 370 Query: 271 EYRLDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 E P++ + + + L +V I +P A+ + +AS+ L Sbjct: 371 EVWFSRADPSVQRLCRSLLDKLVTVYDYTLVPIDIPFLVEGQTAHAMTILTDASAALTDT 430 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 + R+ +L + T +I Y+ A+K+R L+ Sbjct: 431 TNITAANRI----LLTLGRTTPAI------------------------DYVLAQKLRQLL 462 Query: 390 KRDFTEAFEQ--GVDVILTPTTPTSAFPL-GKEENNSG-SMGH--IYNDVFTVAVNMAGL 443 + + ++ G+ +I+TPTT + + + K E G S G I + N G+ Sbjct: 463 MQHLSALWKDFPGM-IIVTPTTACAGWRVESKSEYKYGFSDGDKTIKCMEYVWLANFTGI 521 Query: 444 PAISVPAALCEK-------KMPLGLQLIGQPFREETLFSVGQIIEKEAGYF--RPHKW 492 PAISVPA E K+P+GL G+ EE L G +E+ RP W Sbjct: 522 PAISVPAGYAEPQDEPGNGKVPVGLMGNGEWGSEEALLQWGLHVEEVGSDLQDRPPTW 579 >gi|86748943|ref|YP_485439.1| amidase [Rhodopseudomonas palustris HaA2] gi|86571971|gb|ABD06528.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 483 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 143/488 (29%), Positives = 205/488 (42%), Gaps = 61/488 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +RS D+SA EL + +AI N +NA I V A A E+ +A G+P Sbjct: 20 VRSGDVSAAELAATAQRAIAALNPTINAVIGEVPAALHAPAAET-------EAASFHGVP 72 Query: 76 IGIKD-CFATKGIHTQACSHILDG-FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 IKD +G+ S + G F +++ + ++ G + LG+ N E S Sbjct: 73 FLIKDLVMHAEGVACDMGSRFVHGSFVSPHDTELMRRFKAAGLMTLGRTNTPEMGFSIST 132 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E YGP +PW D T GSSGGS+AAVA L + D GGSIR PA+ G Sbjct: 133 EPVLYGPTRNPW---DLTRSAG--GSSGGSAAAVAAGLVPVAHANDGGGSIRIPAACCGV 187 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG+KPT GR F L GI +TRTVRD A LL A+ G D + P Sbjct: 188 VGLKPTRGRTPT--GPEFGQPLKGMGIEHVVTRTVRDCAALLDAVQGPGVGDPFEIPPPA 245 Query: 251 PDYERALDQSIQGMTVGI-PKEYRLDY-----LSPTIDKTWQQGISWLKDAGAKIVEISL 304 Y + VG+ P R+ + + ID + + + AK +E Sbjct: 246 RPYLQ---------EVGVEPGRLRIAFSLAGVMQAKIDPEMRDALLQV----AKHLEQLG 292 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE-NTRSIGFGQEVKHRI 363 H + A P + EA + A + Y IL + + N R+ E+ Sbjct: 293 HHVEEASPVF-----DEAQFHTAN---LTYWCGFLAAGILGVGQFNGRTP--SSELLEAT 342 Query: 364 MIGTYV--LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + Y L+ D A ++ R F Q DV+LTPT +A PLG Sbjct: 343 TLACYERGLALTLVDGEI--ADAFTNMVCRSVAPFFRQ-YDVLLTPTMAAAALPLGFANG 399 Query: 422 NSGSMGH-------IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + S+G + FT NM G PAIS+P + PLG+Q + + E+ L Sbjct: 400 DDASLGAQGWYDRLFRHAPFTALYNMTGQPAISLPLCSDREGRPLGMQFVARFGAEDLLI 459 Query: 475 SVGQIIEK 482 + +E+ Sbjct: 460 RLAAQLEQ 467 >gi|254572936|ref|XP_002493577.1| Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities [Pichia pastoris GS115] gi|238033376|emb|CAY71398.1| Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities [Pichia pastoris GS115] gi|328354595|emb|CCA40992.1| urea carboxylase [Pichia pastoris CBS 7435] Length = 1832 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 115/412 (27%), Positives = 176/412 (42%), Gaps = 41/412 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +KD KG+ T AC + P ++T+ L D GA+++GK NMD+FA Sbjct: 73 LYGVPIAVKDNIDVKGLPTTGACPSF--KYSPQSDATIVSLLRDQGAIVIGKTNMDQFAT 130 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG S + +DK GGSS GS+ VA + S+GTDT GS R PA Sbjct: 131 GLVGTRSPYGKPTSAF-----SDKHVSGGSSSGSAVVVAKGIVPISLGTDTAGSGRVPAH 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 +G+KPT G S GI+ SLD I + T+ D+ + +A D L Sbjct: 186 INNLIGLKPTKGVFSCHGIVPACKSLDCPSIFSLTLSDAQLAFNIMAQPD--------LA 237 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 +Y R + + PK+ Y S + Q I W D+ K + + + Sbjct: 238 QDEYSRPMPSN--------PKK----YFSSALKIAIPQDIPWFGDSENKKIYTAAVESAS 285 Query: 310 ALPAYYIISPAEASSNLAR--YDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKHRIMIG 366 L A + +LA+ Y+G R E KD + + + V I G Sbjct: 286 KLGAEVVALDFSPLLDLAKCLYEGPWVSERWESMKDFYSTNPDNKDL--DPTVTSIIKGG 343 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 ++ + Y R I +K F++ D +L PT P + P +E + Sbjct: 344 EKFDAATTFRFEYKR-NAILQKVKASFSD-----FDALLVPTAPLN--PTLEEVEKEPVL 395 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + V+T VN+A + A++VPA +P G+ + F + L + Sbjct: 396 VNSRQGVWTNFVNLADMSALAVPAGFRSDGLPCGVTFLSAKFNDYALLDLAN 447 >gi|254249107|ref|ZP_04942427.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia cenocepacia PC184] gi|124875608|gb|EAY65598.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia cenocepacia PC184] Length = 466 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 128/493 (25%), Positives = 211/493 (42%), Gaps = 52/493 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ +E R+R +D+SA E+ D+ + ++ N +NA +E R A+E D Sbjct: 1 MTELWQLSATELAKRVRQRDVSAREVADAVLDRLDAVNPAINAVVEHRPDDVRRQADEVD 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I G D L G+P+ +K G T + + +S V + G V+L Sbjct: 61 RAIARGEDPGPLAGVPVTVKINVDQAGFATTNGTRLQRDLIARADSPVVANIRKAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ N FA+ +G +P + TPGGSSGG++AAVA + ++GTD Sbjct: 121 GRTNSPTFALRWFTSNRVHGHTRNP-----RSPSLTPGGSSGGAAAAVAAGIGPLAVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISF-----APSLDQAGIITRTVRDSAILLKA 234 GGS+R PA G GI+P+ GR S A + AG I RT+ D ++ L+A Sbjct: 176 IGGSVRYPAYACGVHGIRPSLGRVPAFNASSPERAIGAQLMSAAGPIARTIDDLSLALRA 235 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + D D V +P E A ++ G+ + P ++ + L D Sbjct: 236 FSVPDPRDPWHVAVPFDGPEVAKRAALCVRPRGL-------AVVPEVEAALRDAARRLVD 288 Query: 295 AGAKIVEI--SLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 AG + EI + P + AL ++ +A +N A DG + Sbjct: 289 AGWTVDEIDDTPPMREAALLQEQLWLGDGFDALANAAEQDG-----------------DP 331 Query: 351 RSIGFGQEVKHRIM-IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + V+ ++ + V+S RA RT + R + F V+L P + Sbjct: 332 GAAAVIAAVRGKVRDLPADVIS---------RALVRRTTLTRQW-RLFLDEYPVLLLPVS 381 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 FP + ++ T+ A+ GLP ++V AL +P+G+Q++ Sbjct: 382 SELPFPDDLDRQGPEGFDRVWEAQLTLRALPAMGLPGLAVTTALV-NGVPVGVQVVATHH 440 Query: 469 REETLFSVGQIIE 481 RE+ G+ IE Sbjct: 441 REDLCLLAGRDIE 453 >gi|226308487|ref|YP_002768447.1| 6-aminohexanoate-cyclic-dimer hydrolase [Rhodococcus erythropolis PR4] gi|226187604|dbj|BAH35708.1| putative 6-aminohexanoate-cyclic-dimer hydrolase [Rhodococcus erythropolis PR4] Length = 479 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 13/236 (5%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++S D+SA E+++ + ++ N +NA V++++ A E + G L G+P Sbjct: 21 IKSGDVSAKEVLEFSLDRLDERNPAVNA---VISERREEARNEVSGGLPEGP---LHGVP 74 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD G+ + S + +ST+ ++ + G V++GK N EF +S E Sbjct: 75 FVIKDLGMDVAGLPSTNGSRLFADAVAEKDSTLVERYREAGLVVIGKTNTPEFGKNASTE 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +GP +P+ + D+ +PGGSSGG++ AVA + +D GGSIR PAS G V Sbjct: 135 PALFGPTRNPY----ALDR-SPGGSSGGTAVAVAVGIVPGGHASDGGGSIRIPASACGLV 189 Query: 195 GIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+KP+ GR + F+ + +TR+VRD+A+LL AG D + P Sbjct: 190 GLKPSRGRTPTAPARTLFSSPMSVHHALTRSVRDTALLLDLSAGPTVGDPYVILAP 245 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 15/95 (15%) Query: 396 AFEQGVDVILTPTTPTSAFPLGKE---------ENNSGSMGHIYNDVFTVAVNMAGLPAI 446 AF D++LTPT A PLG E+++G G T N +G PAI Sbjct: 375 AFFVDHDLLLTPTMARPAAPLGLLDTANPMSIWEHSAGYSG------LTSPFNSSGQPAI 428 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S+P +P+G+QL+G RE+ L V +E Sbjct: 429 SLPMGHDSAGVPIGVQLVGAFGREDLLIRVASQLE 463 >gi|167717544|ref|ZP_02400780.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Burkholderia pseudomallei DM98] Length = 146 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 1/138 (0%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++E R L +K+ SAVEL Y++ I+ + +NA++ V A+ A A+ +D + NG+ Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARD-LNAFVHVDAELTLAQAKAADAALANGE 63 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 A L G+PI KD F T+G + A S +L + +++TV +L G V LGK NMDEF Sbjct: 64 AGPLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEF 123 Query: 128 AMGSSNETSYYGPVISPW 145 AMGSSNE S +GPV +PW Sbjct: 124 AMGSSNENSAFGPVKNPW 141 >gi|86133830|ref|ZP_01052412.1| glutaminyl-tRNA synthase (glutamine- hydrolyzing) [Polaribacter sp. MED152] gi|85820693|gb|EAQ41840.1| glutaminyl-tRNA synthase (glutamine- hydrolyzing) [Polaribacter sp. MED152] Length = 548 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 112/442 (25%), Positives = 197/442 (44%), Gaps = 61/442 (13%) Query: 56 AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 A E D N + G+P+ +KD TK + T A + L ++ + +KL NG Sbjct: 141 AREKDANKSNVSEFSMYGMPVLLKDNINTKEMPTTAGALALQRNYSKSDAFIVEKLRANG 200 Query: 116 AVMLGKLNMDEFA--------MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 A++LGK+N+ E+A +G S + G ++P+ + F GGSS GS AV Sbjct: 201 ALILGKVNLSEWAYFFCSGCPLGYS---AIGGQTLNPYGRAE----FETGGSSSGSGVAV 253 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A A++GT+T GSI P+S VG+KPT G SR GI+ + +LD G +T+ V D Sbjct: 254 AANFAVAAVGTETSGSITSPSSQNSVVGLKPTIGVLSRTGIVPISSTLDTPGPMTKNVID 313 Query: 228 SAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQ 286 +AI + A+ G+D+ D+ + + S +G +G+ K P + D + Sbjct: 314 NAIFMNAMRGFDQNDSKSKEIDEEYVQNGFRNSFKGKRIGVFK--------PLLTDSIYA 365 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY--DGVRYGLRVEG-KDI 343 I ++ G +IVEI+ P + + + + +L +Y + L ++ KD+ Sbjct: 366 LNIEKMRKVGVEIVEITPPEISFN--GFVTLLNIDMKYDLPKYLSENADKSLFIKNVKDV 423 Query: 344 LEMYENTRSIG--FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE-QG 400 +E + + +GQ++ I ++ L+ + L +A E + Sbjct: 424 IEFNKKDSLLRAPYGQQLFEGIERDQTTIAELEVIKENLKTEANKYL------QALESED 477 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 +D IL S+ + ++ + V+ + P ++VP P+ Sbjct: 478 LDAIL-------------------SINNYHSGIAAVSFH----PTLTVPMGYKTSGEPIS 514 Query: 461 LQLIGQPFREETLFSVGQIIEK 482 L +G+PF E L +G E+ Sbjct: 515 LTFVGKPFEERNLLELGYAFEQ 536 >gi|225873538|ref|YP_002754997.1| amidase domain protein [Acidobacterium capsulatum ATCC 51196] gi|225794444|gb|ACO34534.1| amidase domain protein [Acidobacterium capsulatum ATCC 51196] Length = 738 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 129/248 (52%), Gaps = 9/248 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 + ++ F V + + +R++ +S+++L + YI+ I+ N ++ I + ++A A A+ +D Sbjct: 246 LEDVAFDTVPQLAELIRTRKVSSLDLTEMYIRRIKRYNPLLHFVITITEERAIAQAKAAD 305 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G R L G+P KD A KG T + + Y++TV ++L GAV++ Sbjct: 306 AEIARGHYRGPLHGLPWSAKDLLAVKGYPTTWGAAPYKDQQFDYDATVVKRLDAAGAVLV 365 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M AMG + + G +PW + + G +S S+ VA SIGT+ Sbjct: 366 AKATMGALAMG---DVWFGGITRNPWNPQQGSSGSSAGPASTTSAGCVA-----FSIGTE 417 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI P++ G G++PT+G R G ++ + ++D+ G I R V D AI+L+ I G D Sbjct: 418 TLGSISSPSTRCGVTGLRPTFGFVPRTGAMALSWTMDKIGPICRAVEDCAIVLQHIYGPD 477 Query: 240 ECDATCVN 247 D T N Sbjct: 478 GEDETVRN 485 >gi|116694480|ref|YP_728691.1| amidase [Ralstonia eutropha H16] gi|113528979|emb|CAJ95326.1| Amidase [Ralstonia eutropha H16] Length = 470 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 122/489 (24%), Positives = 199/489 (40%), Gaps = 42/489 (8%) Query: 16 LRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLE 72 + + ISA LVD Y I A + ++NA + A D+ +G L Sbjct: 1 MHAGRISAAGLVDYYLARIAAFDKDGPRINAISCINPAAMHEARVLDDELRTHGPRGPLH 60 Query: 73 GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM--G 130 GIP+ +KD T G+ T A L P ++ +L GA++L K NM E A G Sbjct: 61 GIPMVVKDNIDTVGMPTTAGCAALRQAYPRADAACVARLRAAGAIVLAKTNMSELAASNG 120 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +S G ++P+R + GSS G+ AAVA A +GTD+ GS+R PA Sbjct: 121 RFGYSSANGLTLNPYRLSRNAS-----GSSSGTGAAVAANFAAFGLGTDSFGSVRGPACV 175 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 GI+PT+ G++ A S D G + R D+A++L A+ V Sbjct: 176 HALAGIRPTHDLVESAGVLPLATSFDIVGPLARNADDAAMVLDAL--------------V 221 Query: 251 PDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P A S+ G +GI ++ S +D + ++ AGA + + LP Sbjct: 222 PGSGVIAQPASLAGRRLGIVTDFAGG--SDEVDALFATATEAMRAAGAVTIPVRLPALAL 279 Query: 310 ALPAYYI--ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG- 366 L A + I AE L Y G G L + T + + + + Sbjct: 280 TLYADLLDAIVQAEWVRGLDAYLGQLPGGAPASTAALLAHITTTDLSTDAHQMNPLTLAA 339 Query: 367 ---TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + + ++ AR+ ++ D +G++ ++ PT A P + + Sbjct: 340 LRHAFEMRDTLPQANVAAARRFGAMLD-DILRG--RGLEALVFPTL---ACPASPRFDMA 393 Query: 424 GSMGHIYNDVFTVAVNMA---GLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + H A++MA G P +SVP +P G+ +G+P + L ++ Sbjct: 394 DATYHCRAQQPLAAMHMASASGFPEVSVPMGFTSADIPAGVSWLGRPRSDAVLLAIASAF 453 Query: 481 EKEAGYFRP 489 E+ G+ RP Sbjct: 454 ERATGHRRP 462 >gi|319761689|ref|YP_004125626.1| amidase [Alicycliphilus denitrificans BC] gi|317116250|gb|ADU98738.1| Amidase [Alicycliphilus denitrificans BC] Length = 468 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 206/506 (40%), Gaps = 63/506 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + ++ SE R++ +S VE S + I ++A + ++A A A S+ Sbjct: 1 MSAPHDLSASELLAAYRARSLSPVEATQSVLDHIARWEPHLHATYLLRPEEALAQARASE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G L+G+P +KD AT+G T + ++ +L + GAV++ Sbjct: 61 ARWLRGAPCGPLDGVPATVKDNIATRGDPTPLGTAATPLMPAPADAPPAARLREAGAVIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M ++ M SS +S++ +PW SS G+ AA A +GTD Sbjct: 121 CKTTMPDYGMLSSGLSSFHALARNPWDLSRGPGG-----SSAGAGAAAAAGYGPLHVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD--QAGIITRTVRDSAILLKAIAG 237 GGSIR PA + G G+KP+ GR I P AG +TRTV+D+A++++ ++ Sbjct: 176 IGGSIRLPAGWCGVFGLKPSLGR------IPIDPPYTGRAAGPMTRTVQDAALMMQVLSA 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMT--------------VGIPKEYRLDYLSPTIDK 283 D D ++ +P A D QG G+P + P + Sbjct: 230 PDARD----SMSLPAQPIAWDDFGQGPGRLRGLRIGLLLDAGCGLP-------VDPQVRA 278 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 + + AGA I + T++ L DG+ + R+ Sbjct: 279 AVEAAARLFEQAGAAIEPMPPFLTRHML------------------DGMDHFWRMRS--- 317 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + + R++ GQ+ K I + +S+ D + + R T D Sbjct: 318 ---FMDLRTLTPGQQGKVLPFIRDWAMSAAGLDGPQVFEASQQFHATRVATVHACAPFDY 374 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +L+P P AF + + + FTV NM+ PA SV +P+GLQ+ Sbjct: 375 VLSPVAPMPAFAAELPAPTDDPLRPLEHIAFTVPFNMSEQPAASVNCGYTSCGLPIGLQI 434 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 G+ F + + + E+ G RP Sbjct: 435 AGRRFDDLGVLQMAHAFEQLRGPQRP 460 >gi|170736387|ref|YP_001777647.1| amidase [Burkholderia cenocepacia MC0-3] gi|169818575|gb|ACA93157.1| Amidase [Burkholderia cenocepacia MC0-3] Length = 466 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 128/493 (25%), Positives = 210/493 (42%), Gaps = 52/493 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ +E R+R +D+SA E+ D+ + ++ N +NA +E R A+E D Sbjct: 1 MTELWQLSATELAKRVRQRDVSAREVADAVLDRLDAVNPAINAVVEHRPDDVRRQADEVD 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I GD L GIP+ +K G T + + +S V + G V+L Sbjct: 61 RAIARGDDPGPLAGIPVTVKINVDQAGFATTNGTRLQRDLIARADSPVVANIRKAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ N FA+ +G +P TPGGSSGG++AAVA + ++GTD Sbjct: 121 GRTNSPTFALRWFTSNLVHGHTRNP-----RNPSLTPGGSSGGAAAAVAAGIGPLAVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISF-----APSLDQAGIITRTVRDSAILLKA 234 GGS+R PA G GI+P+ GR S A + AG I RT+ D ++ L+A Sbjct: 176 IGGSVRYPAYACGVHGIRPSLGRVPAFNASSPERAIGAQLMSAAGPIARTIDDLSLALRA 235 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + D D V +P E ++ G+ + P ++ + L D Sbjct: 236 FSAPDPRDPWHVAVPFDGREVPKRAALCVRPRGL-------EVVPEVEVALRDAARRLVD 288 Query: 295 AGAKIVEI--SLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 AG + EI + P + AL ++ +A +N DG + Sbjct: 289 AGWTVDEIDDTPPMREAALLQEQLWLGDGFDALANAVEQDG-----------------DP 331 Query: 351 RSIGFGQEVKHRIM-IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + V+ ++ + V+S RA RT + R + F V+L P + Sbjct: 332 GAAAVIAAVRGKVRDLPADVIS---------RALVRRTTLTRQW-RLFLDEYPVLLLPVS 381 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 FP + + S ++ T+ A+ GLP ++V AL +P+G+Q++ Sbjct: 382 SELPFPDDLDRQGADSFDRVWEAQLTLRALPAMGLPGLAVTTALV-NGVPVGVQVVATHH 440 Query: 469 REETLFSVGQIIE 481 RE+ G+ IE Sbjct: 441 REDLCLLAGRDIE 453 >gi|163939773|ref|YP_001644657.1| amidase [Bacillus weihenstephanensis KBAB4] gi|163861970|gb|ABY43029.1| Amidase [Bacillus weihenstephanensis KBAB4] Length = 536 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 135/273 (49%), Gaps = 18/273 (6%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +NA E+ A + +R +N Sbjct: 73 VDELQKMVDDGKLSYEELTSIYLFRIQEHDQNGISLNAVTEINPNAMEEARQLDKERFLN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T + T A +++L + ++ + +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVIVKDNVQTANVMPTSAGTYVLKDWIADEDAMIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L ++ GYD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNSMVGYD 307 Query: 240 ECDATCVNLP---VPDYERALD-QSIQGMTVGI 268 DA + DY + L ++G +GI Sbjct: 308 GKDAMIEKMKDRDRMDYTKELSIDGLKGKKIGI 340 Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G+ +G+ F E+ LF++G E+++ R K Sbjct: 484 VAGYPELAVPAGYDSDGQPVGVVFVGKQFGEKELFNIGYAYEQQSKNRRSPK 535 >gi|326472535|gb|EGD96544.1| hypothetical protein TESG_03984 [Trichophyton tonsurans CBS 112818] Length = 628 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 123/467 (26%), Positives = 199/467 (42%), Gaps = 74/467 (15%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRP 101 A+ E AAAE S R G R L +GIP +KD + G T C L+ + Sbjct: 172 AWFETRVDLVLAAAEASTLRYKQGCPRGLMDGIPTAVKDEYDIDGYKT--CLGSLNDYTS 229 Query: 102 HYEST-------VTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKF 154 ES+ +KL + GAV+LGKL+M EF + +S YG ++P+ K+ Sbjct: 230 DPESSGGSIASWCVRKLEEAGAVVLGKLSMHEFGLDTSGSNPNYGTPLNPYNP-----KY 284 Query: 155 TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPS 214 GGSS G++ A++ L ++G+D GGSIR P+SF G+KPT+ R S + + + Sbjct: 285 YTGGSSSGTAYAISVGLLPFALGSDGGGSIRIPSSFCSVYGLKPTHSRISHHPGPNHSNT 344 Query: 215 LDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMT-VGIPKEYR 273 G + ++ + L + I C P R + G +G+P+ + Sbjct: 345 CAVNGPLAADLQSLSALYRIIG----CPPPTSPF-QPVSPRLAPCNPNGTKYLGVPEAW- 398 Query: 274 LDYLSPTIDKTWQQGISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGV 332 +P I + + IS L D +V I +P+ A+ + +A++ L + Sbjct: 399 FSQATPAIQRLCRSAISTLADKHNYTVVPIQIPYLIEGQIAHAVTILTDAATLLPDTSNL 458 Query: 333 RYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRD 392 N +G G+E + YL A+K+R L+ + Sbjct: 459 -------------TAPNKILLGLGRETPA---------------TDYLLAQKLRRLLMQH 490 Query: 393 FTEAFEQ--GVDVILTPTTPTSAFPL--GKEENNSGSMGH--IYNDVFTVAVNMAGLPAI 446 + +++ G+ +I+TPTT + +P+ KE S G + F N GLPAI Sbjct: 491 LSWLWKEYPGM-IIVTPTTSCAGWPIRDQKELKYGISDGDQTLKTMNFIWLANFTGLPAI 549 Query: 447 SVPAALC----------------EKKMPLGLQLIGQPFREETLFSVG 477 +VPA E K+P+GL +G+ E+ L G Sbjct: 550 NVPAGFVVPEGAKNEGEIAEENTEGKIPIGLMGMGEWGSEDFLMRWG 596 >gi|221640984|ref|YP_002527246.1| Amidase [Rhodobacter sphaeroides KD131] gi|221161765|gb|ACM02745.1| Amidase [Rhodobacter sphaeroides KD131] Length = 441 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 116/450 (25%), Positives = 182/450 (40%), Gaps = 59/450 (13%) Query: 44 YIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 Y + +AR A + +R G R L+G+P+ KD F T + T+A S +L G P Sbjct: 43 YARLCPTRARTEAMAAAERAKRGLRRGPLDGVPVSWKDLFDTARVPTEAGSALLKGRVPA 102 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSS--NETSYYGPVISPWRSMDSTDKFTPGGSS 160 ++ V G V LGK +M E A N + P ++ D G S Sbjct: 103 EDAAVLGTATLGGLVCLGKTHMSELAFSGLGLNPVTATPPCVN--------DPAAVAGGS 154 Query: 161 GGSSAAVAGF-LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG 219 +AA F L A+IG+DTGGS+R PA++ G+K T GR S G + A D G Sbjct: 155 SSGAAASVAFGLAPAAIGSDTGGSVRIPAAWNDLAGLKTTAGRLSLAGTVPLAARFDTVG 214 Query: 220 IITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP 279 + RTV D A+LL + G D S+ G + + L+ L Sbjct: 215 PLARTVEDCALLLAVLEGGRPADLR-------------GASLAGRRFLVLETLALEDLRE 261 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 + +++ ++ L AGA I + P A+ + EA + A Sbjct: 262 APARGFEEAVARLARAGAHIERGAAPEVVEAMAMAGPLFTGEAYATWA------------ 309 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 E+ E + F + R G + + + + + R +R A Sbjct: 310 -----EVIEGAPDLMF-PRILERFRSGASITAVE-FVTAWQRLEALRAAWA-----ARTA 357 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEK 455 G D +L PT+P P E + ++ ++ T N+ GLPA+++P Sbjct: 358 GYDAVLVPTSPI--LPPDAERLLTDENYYVGENLLALRNTRIANLMGLPALTLPTG---- 411 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 + G+ L+GQP EE L +G E+ G Sbjct: 412 QPSCGISLMGQPMGEERLLRLGAAAERALG 441 >gi|83955488|ref|ZP_00964119.1| amidase [Sulfitobacter sp. NAS-14.1] gi|83840132|gb|EAP79307.1| amidase [Sulfitobacter sp. NAS-14.1] Length = 470 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 133/509 (26%), Positives = 210/509 (41%), Gaps = 87/509 (17%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA-EES 59 M+ L+ A++++ + L + ++A L+++ ++ I+ N +NA +VA + RA E+ Sbjct: 1 MNILDIGALAQA-EALANGSLTARALMEATLERIDAVNGAVNA---IVALRPRAELLAEA 56 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 D+ L GIPI IKD KG+ T S + G +S ++ GA+++ Sbjct: 57 DRADATPRVGWLHGIPIAIKDLSDAKGLPTAKGSPLFAGTIAQKDSVFVARIRAAGAIII 116 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF +GS YGP +P+ D T ++ A G L A G+D Sbjct: 117 GKTNTPEFGLGSHTFNPVYGPTRNPY---DHTRSAGGSSGGAAAALAT-GMLSIAD-GSD 171 Query: 180 TGGSIRQPASFTGTVGIKPTYGR--CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 GS+R PA + G++P++G G + F L AG + R RD A LL + G Sbjct: 172 MMGSLRNPAGWNNVYGMRPSWGTVPAEPEGDL-FLHQLSMAGPMARCPRDLAALLDTMTG 230 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D ++ P P ++D SP + I WL D G Sbjct: 231 EDPKQPLGLS-PAPSLP------------------QMDTPSPA------RRIGWLGDWGG 265 Query: 298 K------IVEIS---------LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV---- 338 I ++S L H A+PA + S R V GL Sbjct: 266 AFAYEDGIEDVSKAALDQLAALGHQVTAVPAPFDADAMWDSWTTLRSFAVAAGLGALYRD 325 Query: 339 -EGKDILE---MYENTRSIGF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDF 393 E +D L+ +E R +GF GQEV+ RA R+ R Sbjct: 326 PETRDKLKPAAQWEIERGLGFTGQEVQ--------------------RASLTRSDWYRRV 365 Query: 394 TEAFEQGVDVILTPTTPTSAFPLGKEENN--SGSMGHIYNDVFTVAV--NMAGLPAISVP 449 T F++ VDV++ P+ F + + +G Y+ V V + GLP +++P Sbjct: 366 TALFDE-VDVLVLPSAQLWPFDVDQVHPTQIAGRDMDTYHRWMQVVVPAGLVGLPVVNIP 424 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQ 478 A + +P GLQ+IG + L + Q Sbjct: 425 AGFGAEGLPAGLQMIGPRGSDTALLQLAQ 453 >gi|171685023|ref|XP_001907453.1| hypothetical protein [Podospora anserina S mat+] gi|170942472|emb|CAP68124.1| unnamed protein product [Podospora anserina S mat+] Length = 557 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 129/478 (26%), Positives = 208/478 (43%), Gaps = 38/478 (7%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIKDCFA 83 E+V ++I +E N +NA I + +A + A + D+RI G+ L IP+ +KD + Sbjct: 58 EIVSAFIARVEEFNPTVNAIISL-NPEALSIANKLDERIAAGNVTGSLFCIPVVLKDNYD 116 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 G +T L +P ++ L + GAV+LGK N+ E A+ +S G ++ Sbjct: 117 AVGTNTTGACLDLANSKPLEDAPTVTALRNAGAVILGKANLHEMALEGLTVSSLGGQTVN 176 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P+ D T TPGGSSGG+ AAVA GTDT S+R PA+ +PT G Sbjct: 177 PY---DKTR--TPGGSSGGAGAAVASNFAIFGTGTDTVNSLRSPANAGSLFSFRPTRGLI 231 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--GYDECDATCVNLPVPDYERALDQSI 261 SR G+I + + D G I R +D A+ L +A G+D D +P R S+ Sbjct: 232 SRAGVIPVSFTQDTVGAIARNPKDLAVALTVMASVGFDPNDNVTALVPPEVRGRDYSASL 291 Query: 262 QGMTVGIPKEYRLD-YLSPT-------IDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 G ++ + LD +L+ T ++ + LK AGA +V I+ A Sbjct: 292 YGGSLTGRRFGFLDGFLNHTASAETTPVNDVMADMVEKLKGAGATVVNITESIYNTVTLA 351 Query: 314 YYIISPAEASSNLARYDG-VRYGLRVEGKDILEMYENTRSIGF-GQEVKHRIMIGTYVLS 371 + E L Y R G E+Y + R + GQ MI + ++S Sbjct: 352 ALDVQIYEFREVLDAYLARPRLGGSPRPGSFAELYNSGRFLVIPGQSG----MIRSSLVS 407 Query: 372 SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN 431 S ++ RKI+ L + +D ++ P +G + SG G Sbjct: 408 STANTAYLDSLRKIQDLTQALDATFVRNNLDALIYPQQKNLVVKIGS-PSQSGRNG---- 462 Query: 432 DVFTVAVNMAGLPAISVPAALCEKK------MPLGLQLIGQPFREETLFSVGQIIEKE 483 + + G P + VPA +P+G++++G+PF E L ++ I ++ Sbjct: 463 ----ILAALTGRPVVHVPAGFSPPSEDAPIGVPIGMEILGRPFAEGLLLNIANHIAEK 516 >gi|83746058|ref|ZP_00943113.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia solanacearum UW551] gi|207742446|ref|YP_002258838.1| amidase protein [Ralstonia solanacearum IPO1609] gi|83727241|gb|EAP74364.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia solanacearum UW551] gi|206593836|emb|CAQ60763.1| amidase protein [Ralstonia solanacearum IPO1609] Length = 448 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 20/237 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNMDEFAM 129 L G+P+ IKD F G + A S L P V GAV+LG+ NM EFA Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGSRALAHQPPAAADAVAVARLRAAGAVLLGRTNMSEFAF 132 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P D T GGS+ G + VAG + A++GTDTGGSIR PA+ Sbjct: 133 SGLGLNPHYG---TPRTPADGTR--AAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G KPT R G + + SLD G + +V D ++ A+ D V L Sbjct: 188 FCALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSV-DCCAIVDAVLSGQALDTDAVPL- 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 G+ +G+ ++Y L T+ +++ + L+ AGA+IV P Sbjct: 246 ------------AGLRLGLTRDYVGADLDDTVATAFERAVMRLEQAGARIVRFDFPE 290 >gi|223986220|ref|ZP_03636237.1| hypothetical protein HOLDEFILI_03547 [Holdemania filiformis DSM 12042] gi|223961816|gb|EEF66311.1| hypothetical protein HOLDEFILI_03547 [Holdemania filiformis DSM 12042] Length = 310 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 154/314 (49%), Gaps = 24/314 (7%) Query: 8 AVSESRDRLRSKDISAVELVDS---YIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 ++SE + LR+ ++ L + I I+ S +NA E V A A+ D+ + Sbjct: 5 SISELAEGLRTGRWTSRSLTEEALRRIAEIDQSGPGLNAIAE-VNPDALWIADALDRELR 63 Query: 65 NGDAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 R L G+P+ +KD +T G +HT A S L F ++ V ++L GAV+LGK Sbjct: 64 ETGPRGPLHGLPVVVKDNISTAGKMHTTAGSAALADFYAPQDAEVVRRLKQAGAVILGKA 123 Query: 123 NMDEFAMGSSNE-------TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 + EFA + + +S G V++P+ + P GSS GS+ AVA L S Sbjct: 124 CLSEFAYWVARKRKMPSGFSSRSGQVVNPYDP-----QLDPSGSSSGSAVAVAAQLVPFS 178 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IGT+T GS+ PA IKPT G SR GII + D AG + +T+ D A++L A+ Sbjct: 179 IGTETNGSLVSPARNNAVATIKPTVGLISRSGIIPISSMQDTAGPMGKTIADCAVVLDAL 238 Query: 236 AGYDECDATCVNLPVP-DYERALDQSIQGMTVGIP--KEYRLDYLSPTIDKTWQQGISWL 292 G DE D + P D+ AL++ + G +G+ + D L TI +Q L Sbjct: 239 WGKDELDPATLACPDHFDFAGALNRGVAGFRIGVLTFDDAPQDELENTI---LEQARQIL 295 Query: 293 KDAGAKIVEISLPH 306 GA +V +SLP Sbjct: 296 VQQGATLVPVSLPQ 309 >gi|153010012|ref|YP_001371227.1| amidase [Ochrobactrum anthropi ATCC 49188] gi|151561900|gb|ABS15398.1| Amidase [Ochrobactrum anthropi ATCC 49188] Length = 437 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 82/235 (34%), Positives = 118/235 (50%), Gaps = 19/235 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S I P + + + +L D GAV++GK M EFA Sbjct: 53 LDGRIVSIKDLFDVAGEPTLAGSVIRRDAAPATQDAKIVSRLRDAGAVIVGKTQMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG P ++D T PGGSS G++ + A +IG+DTGGS+R PA+ Sbjct: 113 TPVGLNPHYG---EPGNAIDPTR--VPGGSSSGAAVSAAEGTSEIAIGSDTGGSVRIPAA 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G APSLD G +TRTV D+ I +AG E LP Sbjct: 168 LNGIVGFKPTARRIPLDGAFPLAPSLDSVGPLTRTVADAIISDAIMAG--ETPVLPNALP 225 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 ++G+ + +PK Y L + P + K ++ ++ L+ AGA I ++ + Sbjct: 226 -----------LKGLRIALPKGYLLADMEPDVAKHFEATVALLEKAGAIIADLEV 269 >gi|225427946|ref|XP_002277392.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 509 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 134/523 (25%), Positives = 208/523 (39%), Gaps = 107/523 (20%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARD 70 S+++L S+ +LVD Y+ IE N ++ + IEV AR A+++D I + + + Sbjct: 35 SQNKLTSR-----QLVDFYLHQIEALNPELRSVIEV-NPDAREQADKADAEIKSKKELGE 88 Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD TK ++T A S+ L G ++ V ++L GAV+LGK +M E+ Sbjct: 89 LHGIPVLLKDSINTKDKLNTTAGSYALLGAEVSGDAAVVERLRKAGAVILGKASMSEWYQ 148 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC---------------AA 174 +RS+ + + + P G + +G C A Sbjct: 149 ---------------FRSLKTRNGWCPRSGQGVNPYVASGEPCGSSSGSAVSVAANMVAV 193 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+GT+T GSI PA VG KPT G SR G+I +P D G +V D+ +L A Sbjct: 194 SLGTETDGSIICPADVNSVVGFKPTVGLTSRTGVIPISPRQDSVG---WSVLDAVYVLDA 250 Query: 235 IAGYDECDATCVN-----LPVPDYERALDQS-IQGMTVGIPKE-YRLDYLSPTIDKTWQQ 287 I G+D D +PV Y++ L++ I G +G+ + + Y T ++ Sbjct: 251 IVGFDPRDGEATKEASKFIPVGGYKQFLNKDGIAGKRLGVVRNPFSGFYNRSTAISAFEA 310 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-ILEM 346 ++ L+ GA +V+ L +E D IL Sbjct: 311 HLTVLRQRGAILVD---------------------------------NLEIENVDIILNP 337 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILT 406 YE+ S E K + I Y+ L L D + E G +V + Sbjct: 338 YESGESTALLAEFK--LNINEYLKELTHSPVRSLAGIIAFNLNNSDLEKTDENGQEVFIA 395 Query: 407 PTTPTSAFPLGKEENNSGS-MGHIYNDVF-------------TVAVNMA------GLPAI 446 +GK+E + M ++ D F T+ MA G P + Sbjct: 396 AEMTNG---IGKQERMAMEMMANLSRDGFEKLMMENELDATVTLGSGMATVLAIGGYPGV 452 Query: 447 SVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 SVPA MP G+ G E L V E+ RP Sbjct: 453 SVPAGYDGDGMPFGICFGGLKGMEPKLIEVAYGFEQATKIRRP 495 >gi|183983653|ref|YP_001851944.1| amidase AmiA2 [Mycobacterium marinum M] gi|183176979|gb|ACC42089.1| amidase AmiA2 [Mycobacterium marinum M] Length = 499 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 148/494 (29%), Positives = 225/494 (45%), Gaps = 55/494 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S +++VEL ++ IE S S +NA+ V+ + A A A +D+R GDA L GI Sbjct: 29 QLASGSVTSVELTRRSLREIEVSQSTLNAFRVVLTESALADAAAADRRRAAGDAAPLLGI 88 Query: 75 PIGIKDCFATKGIHTQACSHILDGF-RPH-YESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 PI +KD G+ T + G+ RP ++S V ++L GAV++GK N E Sbjct: 89 PIAVKDDVDVAGVPTAFGTQ---GYVRPAAHDSEVVRRLKAAGAVIIGKTNTCELGQWPF 145 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +G +PW + TPGGSSGGS+AAVA L A+IG+D GSIR PA++T Sbjct: 146 TSGPGFGHTRNPW-----ARRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIRVPAAWTH 200 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP- 251 VGIKP GR S + G++ RTV D+A++L A +G E D ++ P P Sbjct: 201 LVGIKPQRGRISTWPWPETFNGITVNGVLARTVADAALVLDAASGNVEGD---LHKPAPL 257 Query: 252 ---DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 DY ++ M+ P L P I ++ + G ++ + HT Sbjct: 258 TASDYVGIAPGPLKIAMSTRFPYTGFRAKLHPEI-------LAATRRVGEQLQLLG--HT 308 Query: 308 -QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 + P Y G+R + ++E +G G + R + Sbjct: 309 VERGNPDY----------------GLRLSWDFLARSTAGLWEWAECLGDGVTLDPRTV-- 350 Query: 367 TYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 T + + LR AR +R F+ VDV+L PTT PL + ++ G Sbjct: 351 TNMRAGHALSQAILRNARHHEAAAQRRVGSIFDI-VDVVLAPTT-AQPPPLARAFDDMGG 408 Query: 426 MGH----IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + I T N+ G P+I+VPA +P+G+QL+G E L S+ +E Sbjct: 409 LATDRAIIAACPLTWPWNLLGWPSINVPAGFTVDGLPIGVQLMGPAESEGLLISLAAELE 468 Query: 482 KEAGYF--RPHKWW 493 +G+ +P WW Sbjct: 469 AVSGWATKQPKVWW 482 >gi|83942253|ref|ZP_00954714.1| amidase [Sulfitobacter sp. EE-36] gi|83846346|gb|EAP84222.1| amidase [Sulfitobacter sp. EE-36] Length = 470 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 132/508 (25%), Positives = 211/508 (41%), Gaps = 85/508 (16%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAA-EES 59 M+ L+ A+++S + L + ++A L+++ ++ I+ N +NA +VA + RA E+ Sbjct: 1 MNILDIGALAQS-EALANGSLTARALMEATLERIDAVNGAVNA---IVALRPRAELLAEA 56 Query: 60 DKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 D+ L GIPI IKD +G+ T S + G +S ++ GA+++ Sbjct: 57 DRADATPRVGWLHGIPIAIKDLSDAEGLPTAKGSPLFAGTIAQKDSVFVARIRAAGAIII 116 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N EF +GS YGP +P+ D T ++ A G L A G+D Sbjct: 117 GKTNTPEFGLGSHTFNPVYGPTRNPY---DHTRSAGGSSGGAAAALAT-GMLSIAD-GSD 171 Query: 180 TGGSIRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 GS+R PA + G++P++G + F L AG + R RD A LL + G Sbjct: 172 MMGSLRNPAGWNNVYGMRPSWGTVPAEPEGDMFLHQLSMAGPMARCPRDLAALLDTMTGE 231 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D + G++ G P ++D SP + I WL D G Sbjct: 232 DP------------------KQPLGLSPG-PSLPQMDTPSPA------RRIGWLGDWGGA 266 Query: 299 ------IVEIS---------LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV----- 338 I ++S L H +PA + S R V GL Sbjct: 267 YAYEDGIEDVSKAALDQLAALGHRVTHVPAPFDADAMWDSWTTLRSFAVAAGLGALYRDP 326 Query: 339 EGKDILE---MYENTRSIGF-GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 E +D L+ +E R +GF GQEV+ +A R+ R T Sbjct: 327 ETRDKLKPAAQWEIERGLGFTGQEVQ--------------------QASLTRSDWYRRVT 366 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENN--SGSMGHIYNDVFTVAV--NMAGLPAISVPA 450 F++ VDV++ P+ F + +E +G Y+ V V + GLP +++PA Sbjct: 367 ALFDE-VDVLVLPSAQLWPFDVDQEHPTQIAGRDMDTYHRWMQVVVPAGLVGLPVVNIPA 425 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + +P GLQ+IG + L + Q Sbjct: 426 GFGAEGLPAGLQMIGPRGSDTALLQLAQ 453 >gi|307289571|ref|ZP_07569515.1| amidase [Enterococcus faecalis TX0109] gi|306499385|gb|EFM68758.1| amidase [Enterococcus faecalis TX0109] Length = 528 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 25/268 (9%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KP++ S G++ APSL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPSHSSVSGEGVLPVAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEIS 303 P+ ++ + L+ AGA+++ ++ Sbjct: 330 --MPSAEEEFTAAKKALQKAGAEVIPVT 355 >gi|73538707|ref|YP_299074.1| amidase [Ralstonia eutropha JMP134] gi|72122044|gb|AAZ64230.1| Amidase [Ralstonia eutropha JMP134] Length = 609 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 115/398 (28%), Positives = 165/398 (41%), Gaps = 42/398 (10%) Query: 71 LEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP IKD G T AC + P + V Q+L D GA+ +GK N+D+FA Sbjct: 73 LYGIPFAIKDNIDLAGCPTTAACPEY--AYVPQQSAFVVQRLIDAGAIAIGKTNLDQFAT 130 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + S YG R+ D + G SSG + A G + A +GTDT GS R PA+ Sbjct: 131 GLNGTRSPYGAC----RNAFDPDYVSGGSSSGSAVAVALGHVSFA-LGTDTAGSGRVPAA 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F VG+KPT G S GI+ SLD A I T D+ + G+DE DA Sbjct: 186 FNNLVGLKPTCGLLSATGIVPACRSLDTASIFALTADDAHRVFAVAHGFDEADAFSRKAS 245 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++ S + VG+P + L L+P + W + + + GA++VEI Sbjct: 246 PHGFDFGSAPSFR---VGVPALHALGNLAPDYAEAWGRALDHARSLGAELVEID------ 296 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 I+P ++ L EG + E Y+ R+ + G Sbjct: 297 -------IAPFLETARLL----------YEGPWVAERYQAIRAFIDANPKAVFPVTGQIT 339 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENNSGSM 426 L + A R R +A VD +L PT PT A L + + Sbjct: 340 LGGAAPLAADAFAATYRLRDLRRRCDAVWVQVDAMLLPTVPQHPTIAAMLADPIGLNSEL 399 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 G FT +N+ I+VPA L +P G+ ++ Sbjct: 400 GR-----FTNFMNLLDYGGIAVPAGLTALGLPFGVTVV 432 >gi|327304863|ref|XP_003237123.1| amidase [Trichophyton rubrum CBS 118892] gi|326460121|gb|EGD85574.1| amidase [Trichophyton rubrum CBS 118892] Length = 598 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 140/514 (27%), Positives = 222/514 (43%), Gaps = 80/514 (15%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-----------ESDKRIINGDA----- 68 E+V +++ IE N ++NA I + A A E +SD N ++ Sbjct: 59 EVVTAFLTQIETYNPRINAIISLDATSLSVADELDAWLQDSLEDDSDTPKDNSNSWSDIT 118 Query: 69 --RDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L IP+ +KD T + T A C+ + P +++ V + L D GAV+LGK NM Sbjct: 119 SLMPLYCIPVLLKDNIDTANLSTTAGCAALSGSPPPAHDAPVVKALRDAGAVILGKTNMH 178 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A+ +S G ++P+ D+T GSSGG+ AAVA +GTDT S+R Sbjct: 179 EMALEGLTVSSLGGQTLNPY---DTTRTPG--GSSGGTGAAVASSFAVLGLGTDTVNSLR 233 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG---YDECD 242 PAS G ++PT G SR G++ + + D G I R V D A+ L + G +DE D Sbjct: 234 SPASANGLFSLRPTRGLISRAGVLPVSYTQDTVGPIARCVWDLAVSLNVMTGGEWFDERD 293 Query: 243 -ATCVNLPVPDYERALD--------------QSIQGMTVGIPKEY--RLDYLSPT-IDKT 284 T + P + R LD +S+ G+ G+ + + R D T ++K Sbjct: 294 NMTALR---PRHVRGLDYTASLSKYQGEYGGESLLGVKFGLIEGFMNRADNSETTPVNKA 350 Query: 285 WQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL 344 + LK AGA ++ I+ + Y A + +A D GL E Sbjct: 351 MCAMVCKLKKAGAIVIPIT--DSMYNSTAILGLD-VQAYEYREMVDAYLQGLHGEESRSP 407 Query: 345 EMYENTRSIGFGQE-----VKHRI-MIGTYVLSSRCYDSHYLRARKIRTL---IKRDFTE 395 + S QE + H+ I + ++SS S+ + I L +KR F+ Sbjct: 408 RTMASLYSEIDNQEDSFLVIPHQYPFIQSALVSSPLNVSYAQKQLAINALTLSVKRTFSS 467 Query: 396 AFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 +DV++ P +G N G G + + G P ++VPA + Sbjct: 468 L---NLDVLIYPQQQNLPVRIGS-RNQYGRNG--------ILAALTGNPVVTVPAGYSNR 515 Query: 456 KM--------PLGLQLIGQPFREETLFSVGQIIE 481 + P+G++++G P+ EETL S+ IE Sbjct: 516 DIFRNIPSGVPIGMEIMGLPWEEETLLSIAARIE 549 >gi|212535894|ref|XP_002148103.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Penicillium marneffei ATCC 18224] gi|210070502|gb|EEA24592.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Penicillium marneffei ATCC 18224] Length = 572 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 122/470 (25%), Positives = 203/470 (43%), Gaps = 68/470 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQ--ACSHIL--DGFRP--HYESTVTQKLWDNGAVMLGKLNM 124 L+G I IKD + G+ T + IL DG P +++V ++ + G ++ G + Sbjct: 106 LQGRTIAIKDNISIGGLPTTLGTFTEILCKDGKLPVSPIDASVVSRILEAGGIIKGSSSC 165 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVA------------GFLC 172 + F + ++ GPV SPW + +T GGSS GS+A ++ G Sbjct: 166 ENFCASPLSYSAATGPVHSPW-----LNGYTSGGSSSGSAALISANIVQRQTENKFGQTV 220 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 +IG D GSIR PASFTG G+KPT+G G I AP +D G + + D A+LL Sbjct: 221 DLAIGGDQAGSIRIPASFTGIYGLKPTHGLIPYTGAIGLAPMVDHLGPLAEKLEDIALLL 280 Query: 233 KAIAGYDECDA-----TCVNLPVPDYERALD-----QSIQGMTVG-------IPKEYRLD 275 + +AGYD D + + V DY L Q +G +G I + + + Sbjct: 281 QVMAGYDGIDPRMSPESPLRNQVADYPAQLSEFRSRQLAEGEKLGSSFKVGLISESFDIP 340 Query: 276 YLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRY 334 L+ I D + + AGA + E+S+P + + + + ++S A Sbjct: 341 GLTAQIRDTVLESAKKYFTQAGASVSEVSIPMHREGI-VIWTAACRPSTSEFACQGKPGG 399 Query: 335 GLRVEGKDI-------LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 L I +MYE + I+ ++ R +A + Sbjct: 400 FLTFPAPHIHTQWPPNQQMYEILTAT---NPALVNIIFNAPFITERFGPMTEAKAYRKAY 456 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV--------- 438 ++ + +AFE+ DV++TP P+ + P K + + D VAV Sbjct: 457 ELRAAYDQAFEE-FDVLVTPCAPSVSTPHPKMKGDDDGPASSIMDKVNVAVGVTTNTGPF 515 Query: 439 NMAGLPAISVPAAL------CEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 N+ G PA++VP + K+P+G+Q+IG+ + E ++F I E+ Sbjct: 516 NVTGHPAMNVPCGFGSVEGKPDVKLPIGMQVIGKRWDEMSIFKAAAIFEE 565 >gi|39936503|ref|NP_948779.1| amidase [Rhodopseudomonas palustris CGA009] gi|39650359|emb|CAE28881.1| probable amidase [Rhodopseudomonas palustris CGA009] Length = 471 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 118/487 (24%), Positives = 206/487 (42%), Gaps = 64/487 (13%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIG 77 K S E++++ I +NA AR AA+ S R G+ L +G+P+ Sbjct: 27 KQFSPSEVMEAVIAQATRWEPHINALYGFDPDTARKAAQASTARWAKGEPLGLLDGVPVT 86 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT+G+ I ++ +L + G ++ K M +F M SS +S+ Sbjct: 87 IKENVATEGVPVPLGVPITPLTPATADAPPAARLREAGGILWSKTTMPDFGMLSSGLSSF 146 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW +T SS G+ AA A +GTD GGS+R PA++ G +K Sbjct: 147 HGVTRNPWDVTQNTGG-----SSAGAGAAGAAGYGPLHLGTDIGGSVRLPAAWCGIFALK 201 Query: 198 PTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 P+ GR + P + + AG +TRTV D+A+++ ++ D D ++LP D++ + Sbjct: 202 PSLGR-----VPIDPPYVGRCAGPMTRTVDDAALMMSVLSQPDGRDG--MSLPPHDFDWS 254 Query: 257 -LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD +++G +G+ + G + + V T A A Sbjct: 255 DLDTTLRGKRIGLLTDL---------------GFGMALEDEVRDVVTEAARTFEAQGA-- 297 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL----- 370 II P E DG+ R L ++ + + R + Y++ Sbjct: 298 IIEPVELGFTREMMDGLDNFWRARMWSDLALFSD----------EQRAKVLPYIVRWAEP 347 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 +R +R +T+ R + G+D +++P P +F + + + Sbjct: 348 GARLTGVEVVRGFN-QTMAVRALSAKLFAGIDYLISPVAPVVSF--------AADVASPW 398 Query: 431 ND--------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND ++TV NMA PA S+ A K P+G+Q++G+ F + + V + E Sbjct: 399 NDPDKPFDHILYTVPWNMAENPAASINAGYSTKGFPIGVQIVGKRFDDLGVLRVAKAFEG 458 Query: 483 EAGYFRP 489 G +P Sbjct: 459 LRGEQKP 465 >gi|332523133|ref|ZP_08399385.1| Amidase [Streptococcus porcinus str. Jelinkova 176] gi|332314397|gb|EGJ27382.1| Amidase [Streptococcus porcinus str. Jelinkova 176] Length = 485 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 143/529 (27%), Positives = 229/529 (43%), Gaps = 96/529 (18%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F SE +R++ ++ +ELV+ I N +NA + ++AR A D + Sbjct: 4 FKDASEMAHAVRTRRVTPLELVEDTIAKANKVNPDLNAIVSTRYEEAREEARSRDFSNL- 62 Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT----QKLWDNGAVMLGK 121 G+PI IKD +L F+ +Y +TVT QKL D G ++LGK Sbjct: 63 ----PFAGVPIFIKDLGQNLPGSLATSGSVL--FQKNY-ATVTSHYVQKLRDLGFIILGK 115 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EF + +++ G V P+ D T GSSGG++A +A + S +D G Sbjct: 116 TNVPEFGFKNISDSKANGTVNLPF---DLTRNAG--GSSGGAAALIAAGVTVISAASDGG 170 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGY 238 GSIR PASF G +G+KP+ GR G S+ S A + +T++VRD+ LL + Sbjct: 171 GSIRIPASFNGLIGLKPSRGRIPT-GPESYR-SWQGASVHFALTKSVRDTKNLLFHL--- 225 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRL-------DYLSPTIDKTWQQGISW 291 EC P+P L + + +P + L S ++K + +S+ Sbjct: 226 QECQLEGP-FPLP----LLSEDVLFNAKSVPLKIALLSNEVDGSPFSDEVNKALGEVVSF 280 Query: 292 LKDAGAKIVEIS-LPHTQYAL-PAYYIISPAEASSNLARYDGVRYGL-RVEGKDILEMYE 348 L++ G I I+ LP AL +YY ++ AE + A +D + + R KD +E Sbjct: 281 LENNGHTITSINRLPFDMEALIDSYYFMNAAETA---AMFDEIEQAIKRPLTKDDME--- 334 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRTLIKR-DFTEA----FEQGVD 402 ++ Y + L+A+ +I DF A F + D Sbjct: 335 --------------------TMTWAIYQAGQNLKAKDYSKVISEWDFYSACMANFHKEYD 374 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYN-----------------------DVFTVAVN 439 +++TPTT A + + N M + + +T N Sbjct: 375 LLITPTTHDIAPKHRQLDPNPDLMAKLSQAEGYTSKEQLQLVKEMFQKGLALNPYTPLAN 434 Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + G PAI++P +L + K PLG+Q I RE+ L + + E EAG F+ Sbjct: 435 LTGQPAITLPLSLVKDKYPLGIQFIAAKGREDLLLQIASLFE-EAGQFK 482 >gi|330823560|ref|YP_004386863.1| amidase [Alicycliphilus denitrificans K601] gi|329308932|gb|AEB83347.1| Amidase [Alicycliphilus denitrificans K601] Length = 468 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 206/506 (40%), Gaps = 63/506 (12%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 MS + ++ SE R++ +S VE S + I ++A + ++A A A S+ Sbjct: 1 MSAPHDLSASELLAAYRARSLSPVEATQSVLDHIARWEPHLHATYLLRPEEALAQARASE 60 Query: 61 KRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + G L+G+P +KD AT+G T + ++ +L + GAV++ Sbjct: 61 ARWLRGAPCGPLDGVPATVKDNIATRGDPTPLGTAATPLMPAPADAPPAARLREAGAVIV 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K M ++ M SS +S++ +PW SS G+ AA A +GTD Sbjct: 121 CKTTMPDYGMLSSGLSSFHALARNPWDLSRGPGG-----SSAGAGAAAAAGYGPLHVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLD--QAGIITRTVRDSAILLKAIAG 237 GGSIR PA + G G+KP+ GR I P AG +TRTV+D+A++++ ++ Sbjct: 176 IGGSIRLPAGWCGVFGLKPSLGR------IPIDPPYTGRAAGPMTRTVQDAALMMQVLSA 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMT--------------VGIPKEYRLDYLSPTIDK 283 D D ++ +P A D QG G+P + P + Sbjct: 230 PDARD----SMSLPAQPIAWDDFGQGPGRLRGLRIGLLLDAGCGLP-------VDPQVRA 278 Query: 284 TWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDI 343 + + AGA I + T++ L DG+ + R+ Sbjct: 279 AVEAAARLFEQAGAAIEPMPPFLTRHML------------------DGMDHFWRMRS--- 317 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + + R++ GQ+ K I + +S+ D + + R T D Sbjct: 318 ---FMDLRTLTPGQQGKVLPFIRDWAMSAAGLDGPQVFEASQQFHATRVATVHACAPFDY 374 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +L+P P AF + + + FTV NM+ PA SV +P+GLQ+ Sbjct: 375 VLSPVAPMPAFAAELPAPTDDPLRPLEHIAFTVPFNMSEQPAASVNCGYTGGGLPIGLQI 434 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRP 489 G+ F + + + E+ G RP Sbjct: 435 AGRRFDDLGVLQMAHAFEQLRGPQRP 460 >gi|742250|prf||2009329A urea amidolyase Length = 1830 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 115/426 (26%), Positives = 182/426 (42%), Gaps = 45/426 (10%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N + L G+P+ +KD KG T A + P +STV + L + GA+++GK N+ Sbjct: 65 NKNELKLYGVPVAVKDNIDAKGFETTAACPSF-AYTPERDSTVVKNLREEGAIIIGKTNL 123 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+FA G S YG V + + S + G SSG S G C A + TDT GS Sbjct: 124 DQFATGLVGVRSPYGRVPNAF----SAKHVSGGSSSGSGSVVARGIACLA-LTTDTAGST 178 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+ + IKP+ G S G++ SLD G+ T+ D+ +A D D Sbjct: 179 RVPAALNNLISIKPSVGVFSCSGVVPACKSLDCVGVFALTLGDAETAFDVMAKPD-TDND 237 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + P+P S + V ++ + +P K +++ I L GA+IV + Sbjct: 238 EYSRPLPPNPLQSFGSKPKIAVPTHMQWFGEEENP---KLYKKAIENLAATGAEIVALDF 294 Query: 305 PHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEG-KDILEMYENTRSIGFGQEVKH 361 +LA+ Y+G G R K+ L N + V Sbjct: 295 TDLL----------------DLAKCLYEGAWVGERYAATKEFLAT--NPPEETLDKTVIG 336 Query: 362 RIMIGTYVLSSRCYDSHYLRA---RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 I T ++ + Y R +K+R L+K +DV+ PT P + P + Sbjct: 337 IIKTATKFDAADTFKFEYKRQGILQKVRKLLK---------DIDVLAVPTCPLN--PTME 385 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + + +T VN+A + A+++PA +P G+ LIG+ F E LF +G Sbjct: 386 DLEKEPVLVNSQQGTWTNFVNLADMCALALPAGFRPDGLPNGITLIGKKFTEYALFELGS 445 Query: 479 IIEKEA 484 K+A Sbjct: 446 RYLKKA 451 >gi|294497803|ref|YP_003561503.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium QM B1551] gi|294347740|gb|ADE68069.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium QM B1551] Length = 399 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 106/414 (25%), Positives = 188/414 (45%), Gaps = 64/414 (15%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFA 128 L + +KD F +G I + L +P E + V L GAV+ G + DE Sbjct: 23 LNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAVLKGVTHTDELM 82 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G + E ++YG I+P S D+ PGGSS GS+ AVA + +IGTDTGGS+R P+ Sbjct: 83 YGLNGENAHYGTPINP----KSADRI-PGGSSSGSAVAVAAGITDFAIGTDTGGSVRIPS 137 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR----TVRDSAILLKAIAGYDECDAT 244 S+ G G +P++GR S G+I APS D G++ R + A+LL + + T Sbjct: 138 SYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGAVLLNSTS--RASGFT 195 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 + +P E +QS++ L+P+I+ + ++ + I EI+ Sbjct: 196 RLYVPTDVMELVDEQSMRA-------------LAPSINH--------VMESFSTIEEIA- 233 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYE---NTRSIGFGQEVKH 361 I+P S+ + + ++GK+I + + + FG+++ Sbjct: 234 ------------IAPQGFSTYMETFR------LLQGKEIWQTHGEWIQKENPTFGEDIGS 275 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 R + + + +Y+ ++ R L +++ E+G+ V+ PT P A P+ + Sbjct: 276 RFQ---WASTLTLLNMNYIEEKR-RELRYFMYSQLGEEGILVL--PTAPGPA-PVKDTKG 328 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + T ++GLP +++PA + +P+GL I ++E L + Sbjct: 329 LELENRRLRTLQMTCIAGLSGLPQVTIPAGELD-GLPIGLSFIAGYSQDEKLLN 381 >gi|255715439|ref|XP_002554001.1| KLTH0E12078p [Lachancea thermotolerans] gi|238935383|emb|CAR23564.1| KLTH0E12078p [Lachancea thermotolerans] Length = 1829 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 117/431 (27%), Positives = 180/431 (41%), Gaps = 67/431 (15%) Query: 66 GDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 GD ++L G+P+ +KD G +T A + P +++ L GA+++GK N Sbjct: 66 GDKKNLPLYGVPVAVKDNIDAAGCNTTAACPAFS-YTPERDASTVALLRAAGAIVIGKTN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +D+FA G S YG + +DK GGSS GS++ VA + ++GTDT GS Sbjct: 125 LDQFATGLVGTRSPYGKTPCVF-----SDKHVSGGSSAGSASVVARGIVPLALGTDTAGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECD 242 R PA+ +G+KPT G S G++ SLD I + D+ K +A YD + D Sbjct: 180 GRVPAALNNLIGLKPTKGVFSCAGVVPACKSLDCVSIFALNLGDAERCFKVLAQYDPDHD 239 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 +P L + + +T+ IPKE Y K + + L+ GAK+VE+ Sbjct: 240 EYSRTMPA----NPLQKFAKNVTIAIPKELPW-YDEKENFKHYAAAVKNLEKTGAKVVEL 294 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI--------G 354 E LAR EG + E YE TR Sbjct: 295 DF----------------EPLLELAR-------CLYEGAWVAERYEATRDFFATNPPESS 331 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS-- 412 V I G ++ + Y R ++ + K + +DV+ PT P + Sbjct: 332 LDPTVTKIIKGGANYSAADAFKFEYKRQGILQRVNK------VLESIDVLCVPTCPHNPT 385 Query: 413 -----AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 A P+ E NS +T VN+A + A++VP K+P G+ LIG+ Sbjct: 386 FEQLEAMPV---EMNS------RQGTWTNFVNLADMAALAVPCGFRSDKLPTGITLIGKK 436 Query: 468 FREETLFSVGQ 478 F + L + Sbjct: 437 FTDYALLDLAN 447 >gi|192292296|ref|YP_001992901.1| amidase [Rhodopseudomonas palustris TIE-1] gi|192286045|gb|ACF02426.1| Amidase [Rhodopseudomonas palustris TIE-1] Length = 471 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 120/487 (24%), Positives = 210/487 (43%), Gaps = 64/487 (13%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIG 77 K S E++++ I +NA AR AA+ S R G+ L +G+P+ Sbjct: 27 KQFSPSEVMEAVIAQATRWEPHINALYGFDPDTARKAAQASTARWAKGEPLGLLDGVPVT 86 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT+G+ I ++ +L + G ++ K M +F M SS +S+ Sbjct: 87 IKENVATEGVPVPLGVPITPLTPATADAPPAARLREAGGILWSKTTMPDFGMLSSGLSSF 146 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW +T SS G+ AA A +GTD GGS+R PA++ G +K Sbjct: 147 HGVTRNPWDVTQNTGG-----SSAGAGAAGAAGYGPLHLGTDIGGSVRLPAAWCGIFALK 201 Query: 198 PTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 P+ GR + P + + AG +TRTV D+A+++ ++ D D ++LP D++ + Sbjct: 202 PSLGR-----VPIDPPYVGRCAGPMTRTVDDAALMMSVLSQPDGRDG--MSLPPHDFDWS 254 Query: 257 -LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 LD ++ G +G+ + G++ L+D IV + T A A Sbjct: 255 DLDTTLHGKRIGLLTDLGF-------------GMA-LEDEVRHIVTEAA-RTFEAQGA-- 297 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL----- 370 I+ P E DG+ R L ++ + + R + Y++ Sbjct: 298 IVEPVELGFTREMMDGLDNFWRARMWSDLALFSD----------EQRAKVLPYIVRWAEP 347 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIY 430 +R +R +T+ R + G+D +++P P +F + + + Sbjct: 348 GARLTGVEVVRGFN-QTMAVRALSAKLFAGIDYLISPVAPVVSF--------AADVASPW 398 Query: 431 ND--------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 ND ++TV NMA PA S+ A K P+G+Q++G+ F + + V + E Sbjct: 399 NDPDKPFDHILYTVPWNMAENPAASINAGYSTKGFPIGVQIVGKRFDDLGVLRVAKAFEG 458 Query: 483 EAGYFRP 489 G +P Sbjct: 459 LRGEQKP 465 >gi|10954706|ref|NP_066641.1| hypothetical protein pRi1724_p061 [Agrobacterium rhizogenes] gi|8918706|dbj|BAA97771.1| riorf60 [Agrobacterium rhizogenes] gi|10567370|dbj|BAB16179.1| riorf60 [Agrobacterium rhizogenes] Length = 417 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 109/397 (27%), Positives = 169/397 (42%), Gaps = 41/397 (10%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +G+KD F +G Q S F P + + Q++ D G++++GK E S + Sbjct: 1 MGVKDLFFVEGQLCQRGSRAYKDFAPKATAPIVQRMIDAGSIIIGKTTTTEMGWSGSGFS 60 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +YGP +PW K T GGSS GS AA+A + ++G+D GGS+R PA+F G Sbjct: 61 EFYGPTRNPWDP-----KLTSGGSSSGSGAALAARMVPFTLGSDGGGSVRIPAAFCGVFA 115 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 +K + GR S L AG ++ + +DSA L G D D + DY Sbjct: 116 MKGSLGRVPAW-PWSATEMLSHAGPMSVSAKDSAFLFNIAKGPDPRDHQALPDDGADYTE 174 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 +S + + +G ++P ID+ ++ + L A V P + + + Sbjct: 175 T--RSTKSLRIGFAPSLFGFKVAPEIDRVVREAVDALTKALTIDVRSVSPDWEDPIRIFE 232 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 + A GV YG + + D FG + V +S Y Sbjct: 233 TLWVAGR--------GVAYGSQSDLSD------------FGSGFR------ALVEASARY 266 Query: 376 D-SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE-----ENNSGSMGHI 429 D YL A K R FE VD++L PT P F +E ++ S + Sbjct: 267 DLKDYLSAAKARAEFAGRVHALFED-VDLLLLPTIPVEPFAADREAPEGFQSPSEVLAWT 325 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 FT N++G PA S+P L +P+GLQ++G+ Sbjct: 326 GWTPFTYPFNLSGNPAASLPCGLTVNGLPVGLQVVGR 362 >gi|116687290|ref|YP_840536.1| amidase [Burkholderia cenocepacia HI2424] gi|116653005|gb|ABK13643.1| Amidase [Burkholderia cenocepacia HI2424] Length = 480 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 122/487 (25%), Positives = 202/487 (41%), Gaps = 51/487 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R K+++ EL+D+ + +++ N +NA E + + AR AA I G L G+P Sbjct: 20 VREKEVTPTELLDAVLASLDAINPSLNAVAERLDETARLAAS-----TITGHESVLAGVP 74 Query: 76 IGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD F +G S + +RP ++ + +L G + G E Sbjct: 75 TLIKDLFMPVRGARMANGSFLFGDYRPDFDGELVGRLRRAGIPIAGTSLSPELGTSFCTS 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++ +G +PW + GGSSG ++A VA + + G D GGS+R PAS G Sbjct: 135 SARFGVTRNPWNP-----HVSAGGSSGAAAALVAARVLPFAHGNDGGGSLRVPASCCGVF 189 Query: 195 GIKPTYGRCSRLGIIS---FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KPT GR +I +++ A ITR+VRDSA LL AG D Sbjct: 190 GLKPTRGRTPNGPMIGEGWAGMAINHA--ITRSVRDSAALLDLTAGADTGAPYAAPCQPE 247 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + A + + + + + ++ L P ++ L+ G + + P A Sbjct: 248 TFLAATQRDPRPLKIAVIEQAPPWPLHPACRPALAHTVALLRSLGHHVEPLDSPVDSEAF 307 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ---EVKHRIMIGTY 368 YD V + + + +++M N R + E + RI++ Sbjct: 308 -----------------YDRVFTIIGAQTRALVDMIGNQRGLPVRDGEIEARTRIILRE- 349 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE----NNSG 424 + Y A + R F E+ DV+LTPT + PL E +++ Sbjct: 350 --KGNASGAEYASAVDWIHALGRTFGRLMER-YDVLLTPT--LAMPPLAPAELATADDTQ 404 Query: 425 SMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S+ + + FT N G PA+SVP E+ +P+G G E LFS+ Sbjct: 405 SLSEVIDRAHRFSPFTAWFNATGQPAMSVPLYWDEQGLPIGSHFAGAFGAESLLFSLAAQ 464 Query: 480 IEKEAGY 486 +E+ A + Sbjct: 465 LERAAPW 471 >gi|261409815|ref|YP_003246056.1| Amidase [Paenibacillus sp. Y412MC10] gi|261286278|gb|ACX68249.1| Amidase [Paenibacillus sp. Y412MC10] Length = 525 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 118/467 (25%), Positives = 199/467 (42%), Gaps = 33/467 (7%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFAT 84 E+V +Y+ I S NA+ + A + A E +R L G+PI IK+ Sbjct: 57 EVVKAYLDRIGIYESNYNAFTMMNAGALQEAREADRRRAAGEKLGPLAGVPIVIKEAVDV 116 Query: 85 KGIHTQ----ACSHILDGFR--PHYESTVTQKLWDNGAVMLGKLNMDEFAM-GSSNETSY 137 G + S L G P ++ V +L GA++LGK N+ F+ G+ +S+ Sbjct: 117 AGFPSTFGWGPLSKELGGIELIPEKDAPVVARLKAAGAIILGKTNIPAFSSDGTRASSSW 176 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 G + ++D K PG SS G++ +++G I +TGGSI+ PA+ VGIK Sbjct: 177 AG---DTYNAIDR--KLVPGASSSGTAMSISGNFAVLGIAEETGGSIQNPAAAQALVGIK 231 Query: 198 PTYGRCSRLGIISFAPSL-DQAGIITRTVRDSAILLKAIAGYDECDATCV----NLPVPD 252 PT+G G++ A S D G RTV D+A++L IAGY DA V N+P Sbjct: 232 PTFGLVPNAGVVPLAGSTRDVVGPHARTVHDAAVMLDVIAGYTAEDAKTVASIGNIPKKG 291 Query: 253 YERALDQ-SIQGMTVGIPKEYRL-DYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 Y L+ +++ +G+ L + L+ K + + + L+ GA +V +++ Sbjct: 292 YTSKLNPLALKNKRIGLYGPGWLGEELTAETQKLYDRAVKELEGQGAIVVTDPFADSEF- 350 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 A + S YD +Y R+ ++ + I E + L Sbjct: 351 --AEFAKSSGSIGIESIVYDMEQYLKRLGPNAAIQSVDEL--IVKTGETPSALARYPEAL 406 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + +IRT F + +Q +D ++ P PL E+ Sbjct: 407 KNPGSVPDLSKFTEIRTKYLHIFNDVLDQHKLDALVFPQM-YKETPLLHSEDK------- 458 Query: 430 YNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 D +N+AG+P ++VPA + P + +G+ + E L + Sbjct: 459 IADTTVPEINIAGVPLVTVPAGYYKSGSPFSIAFVGKMWSEADLLGM 505 >gi|311108792|ref|YP_003981645.1| amidase [Achromobacter xylosoxidans A8] gi|310763481|gb|ADP18930.1| amidase family protein 13 [Achromobacter xylosoxidans A8] Length = 469 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 129/514 (25%), Positives = 217/514 (42%), Gaps = 74/514 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M + + ++ E R+K +S VE+ S + I ++ A + A A A A S+ Sbjct: 1 MPQPHELSAVELLQAYRNKTLSPVEVTRSVLDHIARWEPRLKATYALDADGAMAQARASE 60 Query: 61 KRIINGD-----ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 R + G+ L+G+P IK+ AT+G+ + + ++ ++ + G Sbjct: 61 ARWMKGEPLATGGHTLDGVPATIKENIATRGVPVPLGTAATELKPAAADAPPAARMREAG 120 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 AV+LGK M +F M SS +S++ +PW + PGGSS G+ AA A Sbjct: 121 AVLLGKTTMPDFGMLSSGLSSFHELTRNPWDLSKN-----PGGSSAGAGAAAAAGYGPLH 175 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLK 233 IGTD GGS+R PA++ G +KP+ GR I P AG +TRTV DSA+++ Sbjct: 176 IGTDIGGSVRLPAAWCGIATLKPSLGR------IPIDPPFMGRCAGPMTRTVADSALMMG 229 Query: 234 AIAGYDECDATCVNLPVPDYERA-LDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 ++ D D ++LP D++ L++ ++G+ +G+ L Sbjct: 230 VLSQPDARDH--MSLPYQDFDWLDLERDLRGLRIGL-----------------------L 264 Query: 293 KDAGA------KIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 DAG +I + A I++P + A +GV + Sbjct: 265 MDAGCGLPLDPEIRAAVEAAARAFEAAGAIVTPMQPWMTPAMLEGV------------DR 312 Query: 347 YENTRS----IGFGQEVKHRIM--IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQG 400 + TRS QE + +I+ I T+ S + T+ R T A Sbjct: 313 FWRTRSAIDLAALPQEHRDKILPFIRTWAESGGGQSGEDVFRSYYETMNVRAKTVAACAP 372 Query: 401 VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLG 460 D +L+P P A+ + +++ +T+ NM+ PA SV + +P+G Sbjct: 373 YDYVLSPVAPVVAYNAEWPSPTNEVATTMHHIGYTLPYNMSEQPAASVNCGYTKAGLPIG 432 Query: 461 LQLIGQPFREETLFSVGQIIEKEAGYFRP--HKW 492 LQ+ G F + + + + E RP H W Sbjct: 433 LQIAGARFDDLGVLRIARAWES----MRPEQHPW 462 >gi|116334028|ref|YP_795555.1| amidase [Lactobacillus brevis ATCC 367] gi|116099375|gb|ABJ64524.1| Amidase family enzyme [Lactobacillus brevis ATCC 367] Length = 495 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 128/505 (25%), Positives = 216/505 (42%), Gaps = 76/505 (15%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARA-AAEESDKRIINGDARDLEG 73 R+R+ ++S EL+++ + I+ N Q+NA I +KA A AA + D + G Sbjct: 17 RIRAGEVSRQELIETTLAEIDRQNPQLNAVITTRREKALAEAAAQKDT------GQPFLG 70 Query: 74 IPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ +K + + S +L S + L G +++G+ N EF + Sbjct: 71 VPLLLKGLGQQLQGEPSTSGSKLLTTNVASQTSFFVRALQHAGFIIIGQTNFPEFGFKNI 130 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + YGP +PW ++D + PGGSSGG+ AAVA L + G+D GGSIR P+S++G Sbjct: 131 TDAKLYGPARNPW-NLD----YQPGGSSGGAGAAVAAGLVPIAAGSDGGGSIRIPSSWSG 185 Query: 193 TVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 T+G+KPT GR + I FA +TR++ D+A LL ++ Sbjct: 186 TIGLKPTRGRVPVGPSDWRSWQGAAIDFA--------LTRSIADTAALLDSLQTLQPAAV 237 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEI 302 L + LDQ + +G E + +SP + Q +++L++ G + EI Sbjct: 238 FQTPLERSGFFAQLDQPVHPGVIGFTTESPVGTPVSPEAVQAVQDAVTFLREQGFAVEEI 297 Query: 303 SLPHTQYAL-PAYYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 P AL +YY ++ E ++ + G+ L + ++L + Q K Sbjct: 298 HNPIDGVALMESYYTMNAGETAAFMTELAAGLGRELTADDMELL-------TWALYQTGK 350 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK-- 418 H Y L+ +D + ++ ++LTPTT A +G Sbjct: 351 H-TSAADYSLALSKWDQAAWQMAQLHATYP------------IMLTPTTAWPAPKVGDPL 397 Query: 419 -EENNSGSMGHIYN--------------------DVFTVAVNMAGLPAISVPAALCEKKM 457 +++ M I FT N+ G PAIS+P A+ + Sbjct: 398 VSASDAAKMEEITTMRPAAQKQLIYDQWLPALTRSPFTQQANLTGEPAISLPTAVTATGL 457 Query: 458 PLGLQLIGQPFREETLFSVGQIIEK 482 PLG+Q +E L +G + E+ Sbjct: 458 PLGIQFNAAKGQELILLRLGALFER 482 >gi|327188275|gb|EGE55495.1| putative amidase protein [Rhizobium etli CNPAF512] Length = 603 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 202/474 (42%), Gaps = 55/474 (11%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 +S +ELV+ I S+ ++ RAAA E R ++ L GIP +KD Sbjct: 19 LSPLELVEEIIARCSASDDPAIFITTTPEEELRAAARELVARAPEPNSLPLWGIPFAVKD 78 Query: 81 CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 G+ T A + P ++ +L GA+++GK N+D+FA G + S +G Sbjct: 79 NIDVAGLPTTAACPAF-AYHPQADAATVARLRAAGALVIGKTNLDQFATGLNGTRSPHG- 136 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 +P D + GGSS GS+ AVA L + S+GTDT GS R PA+F VGIKPT Sbjct: 137 --APRSVFDR--NYVSGGSSSGSAVAVAAGLASFSLGTDTAGSGRVPAAFNNLVGIKPTP 192 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQS 260 G +G++ S+D + T TV D + + + GYD D P +A+ S Sbjct: 193 GLVPNVGVVPACRSVDVVTVFTATVGDGIAIRRIMEGYDARD--------PFSRQAVPAS 244 Query: 261 IQ------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 + G+ G +E+ Y + ++ + I + GA IV Sbjct: 245 LPSTRPRIGVLDGAEREF---YGNRDVEALYDAAIERARSLGAVIVP------------- 288 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 + +P ++ L Y+G R+ ++ + T F V+ + ++ Sbjct: 289 FDYAPFRQAAELL-YNGPWVAERLAA---VKEFLATNEADFDPTVR------AIIEGAKA 338 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF 434 +D+ + R R T A VD ++ PT+PT+ EE + + + N F Sbjct: 339 FDAVDAFEGRYRLEALRQKTRAEWAKVDFLMLPTSPTT---YSVEEMQADPI--VKNSHF 393 Query: 435 TVAVNMAGL---PAISVPAAL-CEKKMPLGLQLIGQPFREETLFSVGQIIEKEA 484 N A L AI++P + +P G+ L+G F ++ L + + A Sbjct: 394 GRYTNFANLLDCAAIAIPVGFDADGHLPAGVMLVGPAFTDDALAPFADAMHRAA 447 >gi|313499050|gb|ADR60416.1| Amidase [Pseudomonas putida BIRD-1] Length = 567 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 139/557 (24%), Positives = 220/557 (39%), Gaps = 82/557 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIE-----NSNSQMNAYIEVVAQKARAA 55 M E+ ++++E RD L S +AVELV +Y+ I+ ++ + +NA + V +A Sbjct: 1 MIEVTEVSIAELRDALESGRTTAVELVKAYLARIDAYDGADTATALNAVV-VRNPEALKE 59 Query: 56 AEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 AE SD R G L+GIP KD + KG+ + S ++ ++L Sbjct: 60 AEASDARRAKGQVLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAA 119 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GAV LGK NM A G + YG SP+ + T F GSS G+ A A A Sbjct: 120 GAVCLGKTNMPPMANGGM-QRGVYGRAESPYNANYLTAPFA-SGSSNGAGTATAASFSAF 177 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + +T S R PAS G P+ G S G P++D RT+ D +L Sbjct: 178 GLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEILDV 237 Query: 235 IAGYDECD---------------ATCVNLPVPDYERALDQS-IQGMTVGIPKEY------ 272 + D+ D A P E A+D S ++G G+P+ Y Sbjct: 238 VVA-DDADKRGDLWRLQPWVPIPAASTVRPASYLELAVDASALKGKRFGVPRMYINADPD 296 Query: 273 ---------------RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT------QYAL 311 R++ + ID WQQ L+ AGA+++E+ P + Sbjct: 297 AGTAEKPGIGGPTGQRINTRATVID-LWQQARQALEAAGAEVLEVDFPLVSNCEGDRPGA 355 Query: 312 PAYY---IISPAEASSNLARYDGVRYG-----------LRVEGKDILEMYENTRSIGFGQ 357 P Y I+S A L G + R+ D L+++ + + Sbjct: 356 PTVYNRGIVSKAFLHDELWELSGWAFDDFLRANDDPKLNRLADVDGLKIFPHDPGTLPNR 415 Query: 358 EVKHRIMIGTYVLSS----RCYDSHYLRARKIRTL---IKRDFTEAFEQ-GVDVILTPTT 409 E + YV + + +D +R L K D + ++ G+D +L PT Sbjct: 416 EDDLAAGMDEYVNMAKRGLKTWDQIETLPDGLRGLEQTRKLDLEDWMDKLGLDAVLFPTV 475 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA----GLPAISVP-AALCEKKMPLGLQLI 464 P + N + N V+ N+A G+P ++VP + + MP+GL Sbjct: 476 -ADVGPADADINPVSADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFA 534 Query: 465 GQPFREETLFSVGQIIE 481 G+ + + L S E Sbjct: 535 GKAYSDNALLSFAAAFE 551 >gi|256617622|ref|ZP_05474468.1| glutaminyl-tRNA synthase [Enterococcus faecalis ATCC 4200] gi|256597149|gb|EEU16325.1| glutaminyl-tRNA synthase [Enterococcus faecalis ATCC 4200] Length = 528 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 119/444 (26%), Positives = 199/444 (44%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLSGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + A++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS A+V + A S+GT+T GSI PAS VG KPT+ S G++ A SL Sbjct: 223 PSGSSSGSGASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLALSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D+A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDAA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + L+ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKALQKAGAEVIPVT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|255318466|ref|ZP_05359699.1| allophanate hydrolase [Acinetobacter radioresistens SK82] gi|262378696|ref|ZP_06071853.1| allophanate hydrolase [Acinetobacter radioresistens SH164] gi|255304458|gb|EET83642.1| allophanate hydrolase [Acinetobacter radioresistens SK82] gi|262299981|gb|EEY87893.1| allophanate hydrolase [Acinetobacter radioresistens SH164] Length = 602 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 199/478 (41%), Gaps = 78/478 (16%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQK----------ARAAAEESDKRIING---DARDLEG 73 V + A +N+N Q++ IE VA+ A AA ++ + G ++ L G Sbjct: 7 VQDWQHAYQNNNIQLSDLIEYVAELNNDDHAWISIATAAQLQAQIDALTGADIESLPLYG 66 Query: 74 IPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P +KD G +T A C + ++T KL GA+++GK N+D+FA G Sbjct: 67 VPFAVKDNIDVAGFYTTAACKEA--AYLATSDATAVAKLKAAGAIVVGKTNLDQFATGLV 124 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 S YG V + + ++ GGSS GSS VA L S+GTDT GS R PA Sbjct: 125 GVRSPYGAVKNSFNP-----EYISGGSSSGSSVVVANGLVPFSLGTDTAGSGRIPAGHNN 179 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KPT G S G+I ++D I TV D+ + + + GYD D D Sbjct: 180 IVGLKPTKGWFSTTGLIPACRTIDVISIFALTVDDAWQVAQVMQGYDASD---------D 230 Query: 253 YERALDQSIQGM----TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS-LPHT 307 Y R Q++ +GIP Y +K +Q I+ ++ G + I +P Sbjct: 231 YSRVHPQNVPSQFSKGKIGIPDTLEF-YGDAETEKAFQLAIARVQSLGYTVEPIDFVPFQ 289 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 Q A Y AE +S + + + E T + GQ + Sbjct: 290 QLATALYNRSWVAERTSAVEK---------------MVQREQTHPV-IGQIIAQADRFS- 332 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SAFPLGKEE 420 + Y RAR R +I+ + D ++ PT PT A PL K Sbjct: 333 ---AVDAMQDEYERARLSR-VIQNTLAD-----YDALMVPTAPTIYRIAEVEADPLVKNS 383 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + MG +T VN A L A+++P ++ +P G+ I + +E L GQ Sbjct: 384 H----MG-----AYTNFVNFADLSALALPNSIRADGLPTGVTFIASAWMDEALAKFGQ 432 >gi|296808397|ref|XP_002844537.1| amidase [Arthroderma otae CBS 113480] gi|238844020|gb|EEQ33682.1| amidase [Arthroderma otae CBS 113480] Length = 600 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 118/488 (24%), Positives = 212/488 (43%), Gaps = 47/488 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA----RAAAEESD 60 ++ ++ R+ +S ++ +V++ + AI S + Q RA+AE S Sbjct: 111 DYYTSADYRELYKSGKLTPTAVVEALLPAIRRDTSPPGEFSPGFCQSNIDIIRASAEAST 170 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G ++GIP+ +KD G S I P + S +K + GA+++ Sbjct: 171 ERWAKGTPLGPMDGIPVAVKDEVDIDGYDKFMSSKINFTPNPSFTSWCVKKWEEAGAIII 230 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N PV+ R+ + +T G S G AG + A +G D Sbjct: 231 GKTVMHEIGLDTTNNN----PVVGTPRNPHNPSYYTGGSSGGSGYVVSAGVVPIA-LGAD 285 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A ++ G + + D A+ + +A D Sbjct: 286 GGGSIRIPSNYCGIYGLKTTHGRVSAAPSHRLATTVGVLGPMASNLDDLALAYRIMAAPD 345 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG-AK 298 + P P S + +G+ KE+ ++ P + + + I + +D + Sbjct: 346 PSNQVSATFPDP-LLNIQSSSSRPKVIGVYKEW-VERSDPEVLAMFNKAIDYYRDEKYYE 403 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV+I++P+ + I E +S L + + I ++ T Sbjct: 404 IVDITIPYIPEGGKCHAITILNEIASGLTK------------EQISQLTAPT-------- 443 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPL 416 RIMI V ++ + ++++R L+ + + F++ G+ VI TPTTPT+ + Sbjct: 444 ---RIMIS--VGGTQGLAQDFFASQRMRNLLMKHLSFLFQKYPGI-VIATPTTPTAGLKI 497 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGLQLIGQPFRE 470 + E + S S + + + N G PAIS P E +P+GL +G+ E Sbjct: 498 SQGEADLTHGISDSNATLLSMEYVYLANFTGCPAISCPMGYADETSVPVGLMGMGEWGSE 557 Query: 471 ETLFSVGQ 478 E L G+ Sbjct: 558 EALMEWGR 565 >gi|107027230|ref|YP_624741.1| amidase [Burkholderia cenocepacia AU 1054] gi|116691376|ref|YP_836909.1| amidase [Burkholderia cenocepacia HI2424] gi|105896604|gb|ABF79768.1| Amidase [Burkholderia cenocepacia AU 1054] gi|116649376|gb|ABK10016.1| Amidase [Burkholderia cenocepacia HI2424] Length = 480 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 122/487 (25%), Positives = 202/487 (41%), Gaps = 51/487 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R K+++ EL+D+ + +++ N +NA E + + AR AA I G L G+P Sbjct: 20 VREKEVTPTELLDAVLASLDAINPSLNAVAERLDETARLAAS-----TITGHESVLAGVP 74 Query: 76 IGIKDCF-ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD F +G S + +RP ++ + +L G + G E Sbjct: 75 TLIKDLFMPVRGARMANGSFLFGDYRPDFDGELVGRLRRAGIPIAGTSLSPELGTSFCTS 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++ +G +PW + GGSSG ++A VA + + G D GGS+R PAS G Sbjct: 135 SARFGVTRNPWNP-----HVSAGGSSGAAAALVAARVLPFAHGNDGGGSLRVPASCCGVF 189 Query: 195 GIKPTYGRCSRLGIIS---FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KPT GR +I +++ A ITR+VRDSA LL AG D Sbjct: 190 GLKPTRGRTPNGPMIGEGWAGMAINHA--ITRSVRDSAALLDLTAGADTGAPYAAPCQPE 247 Query: 252 DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + A + + + + + ++ L P ++ L+ G + + P A Sbjct: 248 TFLAATQRDPRPLKIAVIEQAPPWPLHPACRPALAHTVALLRSLGHHVEPLDSPVDSEAF 307 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQ---EVKHRIMIGTY 368 YD V + + + +++M N R + E + RI++ Sbjct: 308 -----------------YDRVFTIIGAQTRALVDMIGNQRGLPVRDGEIEARTRIILRE- 349 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE----NNSG 424 + Y A + R F E+ DV+LTPT + PL E +++ Sbjct: 350 --KGNASGAEYASAVDWIHALGRTFGRLMER-YDVLLTPT--LAMPPLAPAELATADDTQ 404 Query: 425 SMGHIYNDV-----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQI 479 S+ + + FT N G PA+SVP E+ +P+G G E LFS+ Sbjct: 405 SLSEVIDRAHRFSPFTAWFNATGQPAMSVPLYWDEQGLPIGSHFAGAFGAESLLFSLAAQ 464 Query: 480 IEKEAGY 486 +E+ A + Sbjct: 465 LERAAPW 471 >gi|118618891|ref|YP_907223.1| amidase [Mycobacterium ulcerans Agy99] gi|118571001|gb|ABL05752.1| amidase AmiA2 [Mycobacterium ulcerans Agy99] Length = 499 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 148/501 (29%), Positives = 224/501 (44%), Gaps = 69/501 (13%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGI 74 +L S +++VEL ++ IE S S +NA+ V+ + A A A +D+R GDA L GI Sbjct: 29 QLASGSVTSVELTRRSLREIEVSQSTLNAFRVVLTESALADAAAADRRRAAGDAAPLLGI 88 Query: 75 PIGIKD---------CFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 PI +KD F T+G + Q +H +S V ++L GAV++GK N Sbjct: 89 PIAVKDDVDVAGVPTAFGTQG-YVQPAAH---------DSEVVRRLKAAGAVIIGKTNTC 138 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E +G +PW + TPGGSSGGS+AAVA L A+IG+D GSIR Sbjct: 139 ELGQWPFTSGPGFGHTRNPW-----ARRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIR 193 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA++T VGIKP GR S + G++ RTV D+A++L A +G E D Sbjct: 194 VPAAWTHLVGIKPQRGRISTWPWPETFNGITVNGVLARTVADAALVLDAASGNAEGD--- 250 Query: 246 VNLPVP----DYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 ++ P P DY ++ M+ P L P I ++ + G ++ Sbjct: 251 LHKPAPLTASDYVGIAPGPLKIAMSTRFPYTGFRAKLHPEI-------LASTRRVGEQLQ 303 Query: 301 EISLPHT-QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + HT + P Y G+R + ++E +G G + Sbjct: 304 LLG--HTVERGNPDY----------------GLRLSWDFLARSTAGLWEWAECLGNGVTL 345 Query: 360 KHRIMIGTYVLSSRCYDSHYLR-ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 R + T + + LR AR +R F+ VDV+L PTT PL + Sbjct: 346 DPRTV--TNMRAGHALSQAILRNARHHEAAAQRRVGSIFDI-VDVVLAPTT-AQPPPLAR 401 Query: 419 EENNSGSMGH----IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 ++ G + I T N+ G P+I+VPA +P+G+QL+G E L Sbjct: 402 AFDDMGGLATDRAIIAACPLTWPWNLLGWPSINVPAGFTVDGLPIGVQLMGPAESEGLLI 461 Query: 475 SVGQIIEKEAGYF--RPHKWW 493 S+ +E +G+ +P WW Sbjct: 462 SLAAELEAVSGWATKQPKVWW 482 >gi|283780171|ref|YP_003370926.1| amidase [Pirellula staleyi DSM 6068] gi|283438624|gb|ADB17066.1| Amidase [Pirellula staleyi DSM 6068] Length = 546 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 26/330 (7%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 E+ + SE +R +I+++E + I I + + +NA + +AR AA +D Sbjct: 6 EILKLGASELAAAIRRGEITSLEATTAAIDRIIDVDRAINAVVIRCFDEARTAARIADAE 65 Query: 63 IINGDARD-------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNG 115 + + L G+P IK+CF G + L R + ++L G Sbjct: 66 VARARSNKSLESLPPLLGVPATIKECFFLAGTASSIGLTHLAKQRATETGVLVRRLQHAG 125 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A++LGK N+ + + + YG +PW + +T GGS+GG +A +A Sbjct: 126 AILLGKTNVPQMMLWHECDNPVYGRTNNPWNTARTT-----GGSTGGEAAIIAARGSFLG 180 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLG----IISFAPSLDQAGIITRTVRDSAIL 231 +G D GGSIR P+ F G +G KPT R G + F + Q G + R V D + Sbjct: 181 LGNDLGGSIRVPSHFCGIMGFKPTSHLLPRSGARNTLRGFDSIVTQPGPMARRVDDLKLA 240 Query: 232 LKAIAGYDEC------DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTW 285 ++ + G D C D ++ P+ A S + + +G + + SP + + Sbjct: 241 MRVLRGEDACRRQVSSDIGELDTPL----EARTASHEKLRIGWFDDDGVFPASPAVRRAV 296 Query: 286 QQGISWLKDAGAKIVEISLPHTQYALPAYY 315 L AG +++ + PH Q + YY Sbjct: 297 AIAREILVSAGCEVIPVHPPHAQELVTLYY 326 >gi|196036751|ref|ZP_03104142.1| amidase family protein [Bacillus cereus W] gi|195990634|gb|EDX54611.1| amidase family protein [Bacillus cereus W] Length = 536 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKVSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ V ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|149173254|ref|ZP_01851885.1| amidase [Planctomyces maris DSM 8797] gi|148848060|gb|EDL62392.1| amidase [Planctomyces maris DSM 8797] Length = 699 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 121/232 (52%), Gaps = 24/232 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEV---VAQKARAAAEESDKRIINGDARDLE 72 L++ +++ EL ++ I+ + ++ +YIE+ +ARAA K II+ L Sbjct: 72 LQTGKLTSEELTLFFLDRIQRYDEKLRSYIELNPNALSEARAADALRAKGIIHSQ---LH 128 Query: 73 GIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA--- 128 GIPI +KD TK +HT + IL P ++ + L GAV+LGK ++ EFA Sbjct: 129 GIPINLKDNIDTKSPLHTTGGAEILLHHSPEQDAELVTSLRSAGAVILGKASLSEFAGAL 188 Query: 129 -MGSSNETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGS 183 M + + G ++P+ PG GSS GS+ + +L AASIGT+T GS Sbjct: 189 TMDPTGANAVSGAGVNPYH---------PGLEVSGSSSGSAISTTAYLTAASIGTETSGS 239 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 + PAS G V +KP+ G S GII D AG ITR V D+AI+L+ I Sbjct: 240 LISPASQNGCVSMKPSLGMVSGRGIIPLVRFQDSAGPITRNVTDAAIMLEII 291 >gi|71903350|ref|YP_280153.1| amidase [Streptococcus pyogenes MGAS6180] gi|71802445|gb|AAX71798.1| amidase family protein [Streptococcus pyogenes MGAS6180] Length = 484 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 134/504 (26%), Positives = 232/504 (46%), Gaps = 79/504 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G + G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--KLFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD KG + + S + ++L D G ++LG+ N EF + ++ Sbjct: 68 IFLKDLGQELKGDLSTSGSKLFKNHHATKTDLFVKRLEDLGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SQLHGPVSLP---HDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+ + RL SP +K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKNSIYQSLQRPLTIAFYQ--RLSDGSPVSLDTEKALRQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + + YYI++ E ++ A + +G R KD +E Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFADIEDT-FG-RPMTKDDMETM----------------- 335 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKEE 420 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 336 --TWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGELV 391 Query: 421 NNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKKM 457 +S M ++ +N V +T N+ G PAIS+P ++ + Sbjct: 392 PDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEGL 451 Query: 458 PLGLQLIGQPFREETLFSVGQIIE 481 P+G+QLI RE+ L + + E Sbjct: 452 PMGIQLIAAKGREDLLLGIAEQFE 475 >gi|302527231|ref|ZP_07279573.1| amidase [Streptomyces sp. AA4] gi|302436126|gb|EFL07942.1| amidase [Streptomyces sp. AA4] Length = 476 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 131/468 (27%), Positives = 203/468 (43%), Gaps = 62/468 (13%) Query: 38 NSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC-FATKGIHTQACSHIL 96 N Q+NA +E AE+ G A L G+P IKD A G ++ S + Sbjct: 41 NPQLNAVVETW------PAED-----FPGSA-PLAGVPFLIKDLGVAMAGKRSELGSRLA 88 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 G +S + ++ G V +G+ E A ++ E +YG +PW STD Sbjct: 89 AGAVSPADSFLMRRFRRAGLVTIGRTATPEMAYSTTTEPDFYGATRNPW----STDHSAG 144 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSL 215 G S G +A AG + A TD GSIR PAS+ G G+KPT GR S+ G L Sbjct: 145 GSSGGSGAAVAAGMVPVAH-ATDAAGSIRVPASYNGLFGLKPTRGRVSQGPGADEVFNGL 203 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 G ++RTVRDSA+LL I G + D P PD A + P R+ Sbjct: 204 AVQGSLSRTVRDSAVLLDLIEGPEPGDPYFA--PRPDRPYATEAKTD------PGRLRIA 255 Query: 276 YL-SPTIDKTWQQGISWLKDAGAKIVEISLPH--TQYALP-----AYYIISPAEA-SSNL 326 L P + + +S +++E SL H ALP +++ A ++NL Sbjct: 256 VLRQPWGGRQPTEPVSAALSETVRLLE-SLDHEVEDTALPLGVSWEEFVLGNARMWAANL 314 Query: 327 ARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI 385 A + D V G+ + E + + +Y + ++RA I Sbjct: 315 APWIDAV---AAATGRPVDET------------TLEPVTLASYRYGHQVTADEFVRALAI 359 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLG------KEENNSGSMGHIYN-DVFTVAV 438 R + R F + F + D++L+PT P LG + + G + + + +T A Sbjct: 360 RNQVARTFAQHFAR-YDLLLSPTLPDPPVKLGVYGEGAERLDGLGWLDRVLDRSPYTAAA 418 Query: 439 NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 N++G+P++SVP A +P+G+Q RE+ LF + +EK A + Sbjct: 419 NVSGVPSMSVPLAEA-GGLPVGMQFTAAFGREDLLFRLAGQLEKAAPW 465 >gi|238484307|ref|XP_002373392.1| N-acylethanolamine amidohydrolase, putative [Aspergillus flavus NRRL3357] gi|220701442|gb|EED57780.1| N-acylethanolamine amidohydrolase, putative [Aspergillus flavus NRRL3357] Length = 612 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 118/488 (24%), Positives = 218/488 (44%), Gaps = 55/488 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL +AV+E+ L +D E A+++ ++ RAAAE S KR Sbjct: 123 ELKPLAVAETLMPLIRRDA-------------ETPGKHSVAFLDSQVERVRAAAEASTKR 169 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST--VTQKLWDNGAVML 119 +G L+GIP+ +KD +G S + F + T +K + GA+++ Sbjct: 170 YKDGKPLGPLDGIPVVVKDEVHIEGYRRTLGSKL--DFTGEFTGTSWCVKKWEEAGAIIV 227 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + +++ + +P R+ + + + G S G A AG L ++G D Sbjct: 228 GKTTMHELGLDNTDTNNNNPNHGTP-RNPHNRNYYCGGSSGGSGYAVGAG-LAPIALGAD 285 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA--G 237 GGSIR P+SF G G+KP++GR S +S A ++ G + ++ D A+ + +A Sbjct: 286 GGGSIRIPSSFCGIWGLKPSHGRISGTPTVSLAQTVGVYGPMAASIDDLALAYRIMAAPA 345 Query: 238 YDECDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 E D + + P P + + T+GI +++ +D P + + + + + + G Sbjct: 346 PAEQDPSSASFPDPLTTLQVWSSKPRTKTIGIARDW-IDRAEPPVRAVFDRALDFYRKQG 404 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++++I++P+ A+ + E +S L D V GK Sbjct: 405 YEVIDITIPYLPEGQRAHILTIMTEIASGLTP-DQV-------GK-------------LS 443 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTTPTSAFP 415 K + +G + +S + +L ++++R++I F + +ILTPTTP + Sbjct: 444 APNKVLVSMGMWQISGQ----DFLASQRLRSIIMSHLAYLFGKHPGLLILTPTTPIPGWR 499 Query: 416 LGKEENNSGSM----GHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFRE 470 + E + S + + N + N G PAI+ PA + ++P+GL +G+ E Sbjct: 500 INGEADLSRGLSDGKSSVRNMEYVWLANFTGCPAINCPAGYVQDTRVPVGLMAMGEWGTE 559 Query: 471 ETLFSVGQ 478 E L + + Sbjct: 560 EDLIAFAR 567 >gi|187919942|ref|YP_001888973.1| allophanate hydrolase [Burkholderia phytofirmans PsJN] gi|187718380|gb|ACD19603.1| allophanate hydrolase [Burkholderia phytofirmans PsJN] Length = 618 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 127/476 (26%), Positives = 195/476 (40%), Gaps = 62/476 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQ--KARAAAEESDKRIINGDA----RDLEGI 74 ++ E V S + IE SN + V A +ARA A E+ G A L G+ Sbjct: 15 LTPTEAVLSALARIEASNRPEAWILRVPAADVQARAKALEALYDA-QGSAVFEHMPLFGV 73 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P +KD G+ T A + P + Q+L D GA+++GK N+D+FA G Sbjct: 74 PFAVKDNIDVAGLPTTAACDSF-AYTPDTSAFAVQRLIDAGAILIGKTNLDQFATGLVGT 132 Query: 135 TSYYGPVI---SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA-SIGTDTGGSIRQPASF 190 S YG V SP R + + + G C A S+GTDT GS R PA F Sbjct: 133 RSPYGAVRHSESPLRVSGGSSSGSAVAVATG---------CVAFSLGTDTAGSGRVPAGF 183 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G+KP+ G S+ G++ SLD + V D+ +L IA +D D +P Sbjct: 184 NGLAGLKPSLGLVSKRGVVPACRSLDTISVFAHDVDDAWRVLCEIACFDSLDGYSRKVPS 243 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTI-DKTWQQGISWLKDAGAKIVEISLPHTQY 309 R++ + +G+P+ RL++ I + + + L T Sbjct: 244 LGLLRSVPR------IGVPE--RLEFYGDAIASRAFATALDTLT-------------THL 282 Query: 310 ALPAYYI-ISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 LP I P +A S L YDG E + L + T V I Sbjct: 283 HLPTQAIDFEPLKAVSAL-LYDGPWVA---ERRAALGTFFETHHQAIDAVVAKVIGKAEQ 338 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN---SGS 425 ++ ++ Y A +KR EA + +D+++ PTTPT + N + Sbjct: 339 FSAADAFNGQYALAD-----LKRH-AEALFETIDILIVPTTPTHPLIADVQANPIELNSQ 392 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +G+ +T VN+ L A++VP +P G+ LI + L +G I+ Sbjct: 393 LGY-----YTNFVNLLDLCALAVPCQRRSDGLPAGVTLIAPSGADRRLAELGARIQ 443 >gi|91780475|ref|YP_555682.1| putative amidase [Burkholderia xenovorans LB400] gi|91693135|gb|ABE36332.1| Putative amidase [Burkholderia xenovorans LB400] Length = 474 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 8/242 (3%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIP 75 ++ S VE++ + + +E + +NA+ ++ A A A ES+KR + L+G+P Sbjct: 18 KTGTTSPVEVMQAVLLRVEQLDPAVNAFCQIAAD-ALDMARESEKRWQHKRPLGPLDGVP 76 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IKD A G+ T+ S D ++S +L ++GA+ K + +FA ++ Sbjct: 77 VSIKDNVAVAGLATRYGSRATDETPSPHDSPCVARLRESGAICFAKTTLPDFAHKIVTDS 136 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 G +PW TD+ TPGGSSGG++AAVA + A+IGTD GGSIR PA+FTGT G Sbjct: 137 PLTGVTRNPW----DTDR-TPGGSSGGAAAAVALGMAPAAIGTDGGGSIRIPAAFTGTFG 191 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP++GR F L G +TR V D+A +L I+ D D + DYE Sbjct: 192 FKPSFGRVPHAPRGPFG-LLSHVGPMTRCVADAARILTVISRPDSRDWYALPFDASDYEL 250 Query: 256 AL 257 L Sbjct: 251 GL 252 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 AF + D+++ P P A L + + + H FT N GLPA SV A Sbjct: 368 NAFFERYDLVICPVYPRVAMSLAELQASKELFPH-----FTAWCNQLGLPAASVYAGSTS 422 Query: 455 KKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +P+G+Q++G + + I+E G Sbjct: 423 DGLPIGIQIVGGRHADALVLWASHILELALG 453 >gi|225427951|ref|XP_002277441.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 475 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 149/306 (48%), Gaps = 23/306 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG-- 73 + +++ +LV Y+ I N + IEV A A+++DK R LEG Sbjct: 3 FQQNKLTSRKLVRFYLGEIHKLNPILRGVIEV-NPDALLQADKADKEKKAKSLRSLEGLH 61 Query: 74 -IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE----- 126 IPI +KD ATK ++T A S L ++ V +KL GA++LGK ++ E Sbjct: 62 GIPILLKDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSEWTGLR 121 Query: 127 --FAMGSSNETSYYGPVISPWRSMDSTDKF--TPGGSSGGSSAAVAGFLCAASIGTDTGG 182 F G T G VI + + + TP GSS GS+ +VA L A S+GT+T G Sbjct: 122 FVFPYGWCARTGQ-GRVIYGFNDVQNPYVLSATPCGSSSGSAISVAANLAAVSLGTETMG 180 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SI P+ F VGIKPT G SR G++ +P D G I RTV D+ +L I G+D+ D Sbjct: 181 SILCPSHFNSVVGIKPTVGLTSRAGVVPISPRQDTVGPICRTVSDAVEVLDVIVGFDKRD 240 Query: 243 ATCVN----LPVPDYERALD-QSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDA 295 +P Y++ L+ ++G +GI + Y + +S + ++ L+ Sbjct: 241 KATRTASKYIPRGGYKQFLNANGLKGKRLGIVRNPPYMFENVS-VQPQVFEHHFHTLRQG 299 Query: 296 GAKIVE 301 GA +V+ Sbjct: 300 GAVLVD 305 >gi|156836922|ref|XP_001642500.1| hypothetical protein Kpol_299p2 [Vanderwaltozyma polyspora DSM 70294] gi|156113037|gb|EDO14642.1| hypothetical protein Kpol_299p2 [Vanderwaltozyma polyspora DSM 70294] Length = 1832 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 114/413 (27%), Positives = 180/413 (43%), Gaps = 43/413 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +KD K T A C + P +STV + L + GA++LGK N+D+FA Sbjct: 76 LLGVPIAVKDNIDVKNCLTTAGCPSF--AYNPISDSTVVRLLKNAGAIILGKTNLDQFAT 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG + + D + G S+G +S G + A +GTDT GS R PA+ Sbjct: 134 GLVGTRSPYGKTPCVF----NQDYVSGGSSAGSASVVARGIVPLA-LGTDTAGSGRVPAA 188 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCVNL 248 +G+KPT G S G++ SLD I + ++D+ L+ IA D E D +L Sbjct: 189 LNNIIGLKPTRGIVSCNGVVPACKSLDCVSIFSLNLKDAETCLRTIANPDYENDEYSRSL 248 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHT 307 P + +R D + + IPK ++ ++ ++ LK+ A IVE+ P Sbjct: 249 P-SNPKRKFDHK---LNIAIPKNIP-NFGDDKNSFLFEDAVNVLKEIDANIVELDFQPLL 303 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD--ILEMYENTRSIGFGQEVKHRIMI 365 A Y P LA + + ++ D +L + E+ + Sbjct: 304 DLAECLYN--GPWVVERYLATKEFLERNPPLDSLDPTVLSIIESAKKFN----------- 350 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 + + S Y R ++I IK F + +DV+ PT P + P KE Sbjct: 351 -----ACDVFKSEYKR-KQILQKIKNIFKD-----IDVLCVPTCPLN--PTFKEVEQEPI 397 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + +T VN+A L AI++PA +P G+ LI + F + L + Sbjct: 398 KVNSIQGTWTNFVNLADLSAIAIPAGFRNDGLPNGITLISRKFNDYALLELAN 450 >gi|21910154|ref|NP_664422.1| amidase [Streptococcus pyogenes MGAS315] gi|28896147|ref|NP_802497.1| amidase [Streptococcus pyogenes SSI-1] gi|21904347|gb|AAM79225.1| putative amidase [Streptococcus pyogenes MGAS315] gi|28811397|dbj|BAC64330.1| putative amidase [Streptococcus pyogenes SSI-1] Length = 484 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 135/504 (26%), Positives = 234/504 (46%), Gaps = 79/504 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G + G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--KPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD KG + + S + ++L D G ++LG+ N EF + ++ Sbjct: 68 IFLKDLGQELKGDLSTSGSKLFKNHHATKTDLFVKRLEDLGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SQLHGPVSLP---HDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+ + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKNSIYQSLQRPLTIAFYQ--RLSDGSPVSLDTAKALRQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 + + YYI++ E ++ A + +G R KD +E Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFADIEDT-FG-RPMTKDDMETM----------------- 335 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKEE 420 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 336 --TWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGELV 391 Query: 421 NNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKKM 457 +S M ++ +N V +T N+ G PAIS+P ++ + Sbjct: 392 PDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEGL 451 Query: 458 PLGLQLIGQPFREETLFSVGQIIE 481 P+G+QLI RE+ L + + E Sbjct: 452 PMGIQLIAAKGREDLLLGIAEQFE 475 >gi|323526990|ref|YP_004229143.1| Amidase [Burkholderia sp. CCGE1001] gi|323383992|gb|ADX56083.1| Amidase [Burkholderia sp. CCGE1001] Length = 459 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 120/233 (51%), Gaps = 14/233 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F +G T+A S +L D ++ +L GAV++G+ NM EFA Sbjct: 75 LAGIPVSVKDLFDIEGQRTRAGSTVLADAPAATEDAVAVARLKRAGAVIVGRTNMSEFAF 134 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +SP+R D+ GGSS G++A+VA + A ++GTDTGGSIR P++ Sbjct: 135 SGLGLNPHYGNPLSPYRRDVKGDERISGGSSSGAAASVADGMAAVALGTDTGGSIRIPSA 194 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + Sbjct: 195 LCGLTGFKPTAARIPKQGGVPLSSTLDSFGPIGVSVACCALVDRMLAGLE---------- 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P A + ++G+ +G+ Y D + P + + L+ AGA + E+ Sbjct: 245 -PRVPAA--RPLEGVRLGVLTHYVTDGVEPAVAAAIDTALKHLEAAGAIVSEV 294 >gi|323530298|ref|YP_004232450.1| Amidase [Burkholderia sp. CCGE1001] gi|323387300|gb|ADX59390.1| Amidase [Burkholderia sp. CCGE1001] Length = 435 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 109/481 (22%), Positives = 195/481 (40%), Gaps = 93/481 (19%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 + R RL + ++ ++ +D+ ++A+ A+ E+ Sbjct: 25 QQRGRLVLEALARIDEIDTEVRAMTA-----------------VASRETALANALAATGP 67 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ +KD F T + T S I +G +P ++ + L +GAV++GK EFA Sbjct: 68 LAGLPVAVKDIFDTSELVTSYGSPIYEGHQPKSDAAIVTLLKRSGAVVVGKTVTSEFA-- 125 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA----SIGTDTGGSIRQ 186 Y P + + + PG ++GGSS+ A + A ++G+ TGGS + Sbjct: 126 ------YMAPTV-------TRNPCDPGRTAGGSSSGSAAAVAAGMAPFAVGSQTGGSTIR 172 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PASF G G KPT G +G+ F+ S D G+ VRD A L + ++G Sbjct: 173 PASFCGVAGFKPTIGMLPTVGMKCFSWSFDTVGLFAAGVRDVAYLAQVLSG--------- 223 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 A+ + + G+P+ Y S + I ++ AG ++ + Sbjct: 224 ------RPLAVKGNAEPPVFGVPEHYPWTEPSANASHVLETAIRAVERAGGRVRPV---- 273 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 R+D L + D ++ YE +++GF + +HR+ + Sbjct: 274 ---------------------RFDSWMTDL-IAAHDTIQSYEAWQALGFEYD-RHRVQLS 310 Query: 367 TYVLSSRCYDSH-----YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 + + S+ Y+ A K E F+ G+ +LTP+ P A N Sbjct: 311 PMLFAFLARASNVDVAAYMSAYATMARAKGRLGELFD-GITALLTPSAPDEA------PN 363 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 S G + F + G P ++VP + P+G+Q+IG+P+ + +E Sbjct: 364 GLASTG---DPAFNRNWTLLGCPCVNVPGLRGARGAPIGVQVIGRPWDDARCLDAAAFVE 420 Query: 482 K 482 + Sbjct: 421 Q 421 >gi|152997205|ref|YP_001342040.1| amidase [Marinomonas sp. MWYL1] gi|150838129|gb|ABR72105.1| Amidase [Marinomonas sp. MWYL1] Length = 488 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 127/485 (26%), Positives = 198/485 (40%), Gaps = 49/485 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 ++ +I + EL++ I+ E N ++NA E + AR A G+P Sbjct: 30 VKKGEIKSEELLECCIERAEKVNPEINAIAETLYDSARKATPHEGL---------FSGVP 80 Query: 76 IGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 +KD FA SH L RP + + +L G +G EF + E Sbjct: 81 TFVKDLFAPVAEARMTNGSHALGEARPGMDDNLVSRLRKTGCTFIGTSTSPEFGASYTTE 140 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 ++ +GP +PW + K + GGSSGGS+A VA + + D GGSIR PAS G Sbjct: 141 STRFGPTRNPWNT-----KHSSGGSSGGSAALVAARVVPFAHANDGGGSIRVPASCCGLF 195 Query: 195 GIKPTYGRCSRLGIISFA-PSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 G+KPT GR + A I+ +VRDSA L+ AG D + Sbjct: 196 GMKPTRGRMPSGPLTGEGWGGFGTAHAISLSVRDSAALMDLTAGMDLGAPYASPSQSMSF 255 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL-- 311 A ++ + + + + SP + + G + + LP Y Sbjct: 256 LDATKTPVRPLRIALVESMDPWPSSPESLAAVRHAAKLCESLGHAVTQAELPVDLYQFFD 315 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDIL--EMYENTRSIGFGQEVKHRIMIGTYV 369 + II +N Y V ++ GKD+ E+ +TR + ++ + IG Sbjct: 316 QCFDII-----GTNTRNY--VELLGQMRGKDVSLDELQVHTRIM-----LREKGNIGAV- 362 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK----EENNSGS 425 Y+RA + + R F + DVILTPT +G +EN Sbjct: 363 --------QYVRAIESMHALGRRFANLMTE-YDVILTPTLAKPPVLIGTLDVIDENKYAD 413 Query: 426 --MGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + H ++ +T N G PA+SVP E+ +P+G G+ EETLFS+ +E Sbjct: 414 DLIQHYHSYSPYTCLFNATGQPAMSVPLYWTEQGLPIGAHFSGRFGDEETLFSLAAQLEL 473 Query: 483 EAGYF 487 +F Sbjct: 474 AQPWF 478 >gi|254252952|ref|ZP_04946270.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia dolosa AUO158] gi|124895561|gb|EAY69441.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Burkholderia dolosa AUO158] Length = 458 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 118/236 (50%), Gaps = 14/236 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +LDG P V +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLDGAPPATTDAVAVARLRRAGAVIVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+R D GGSS G++A+VA + A ++GTDTGGS+R PA+ Sbjct: 134 SGLGLNPHFGTPRSPYRRDVPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSLRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRIPTHGGVPLSTTLDSFGPIGVTVACCALVDRILAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 PD A + ++G+ +G+ Y D + + + L+ AGA + E+ P Sbjct: 244 -PDVPAA--RPLEGVRLGVLTNYVTDGVDAEVAAALDAALKHLEAAGAIVTEVRFP 296 >gi|315043202|ref|XP_003170977.1| amidase [Arthroderma gypseum CBS 118893] gi|311344766|gb|EFR03969.1| amidase [Arthroderma gypseum CBS 118893] Length = 598 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 117/493 (23%), Positives = 211/493 (42%), Gaps = 64/493 (12%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA----RAAAEESD 60 ++ ++ R+ ++ ++ +V++ + I S + Q RA+AE S Sbjct: 108 DYYTSADYRELYQAGKLTPTAVVEALLPMIRRDTSPPGEFSPGFCQSKIDIIRASAEAST 167 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R NG ++GIP+ +KD G S + P++ S +K + GA+++ Sbjct: 168 QRWANGTPLGPMDGIPVAVKDEVDIDGYDKYMSSKVNFTANPNFTSWCVKKWEEAGAIVI 227 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N PV+ R+ + +T G S G A AG + A +G D Sbjct: 228 GKTVMHEIGLDTTNNN----PVVGTPRNPHNPGYYTGGSSGGSGYAVGAGVVPIA-LGAD 282 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A S+ G + + D A+ + + D Sbjct: 283 GGGSIRIPSNYCGIYGLKTTHGRVSAAPSCRLATSVGVLGPMASNLDDLAMAYRIMGAPD 342 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAK 298 + P P S +G +G+ K++ ++ P + + + I + +D G + Sbjct: 343 PNNPVSAAFPDPLLSIPSPASSRGKVIGVYKDW-VERSDPEVLAMFNKAIDYYRDEQGYE 401 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV+I++P+ + G + IL N + G +E Sbjct: 402 IVDITIPY-------------------------IPEGGKCHALSIL----NEIASGLTKE 432 Query: 359 VKHRIMIGTYVLSS----RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL-TPTTPTSA 413 ++ T +L S + Y ++++R L+ + F++ +I+ TPTTP++ Sbjct: 433 QISQLSAPTKILVSVGGTQGLAQDYFASQRMRHLLMNHLSFLFQKYPGIIIATPTTPSAG 492 Query: 414 FPL---------GKEENNSG--SMGHIYNDVFTVAVNMAGLPAISVPAALC-EKKMPLGL 461 + G +NNS SM ++Y N G PAIS P E +P+GL Sbjct: 493 SKISQGEADLTHGISDNNSTLISMEYVY------LANFTGCPAISCPMGYADETSIPVGL 546 Query: 462 QLIGQPFREETLF 474 +G+ EE L Sbjct: 547 MGMGEWGSEEALI 559 >gi|302663156|ref|XP_003023224.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Trichophyton verrucosum HKI 0517] gi|291187210|gb|EFE42606.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Trichophyton verrucosum HKI 0517] Length = 598 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 116/484 (23%), Positives = 211/484 (43%), Gaps = 46/484 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK----ARAAAEESD 60 ++ ++ R+ ++ ++ +V++ + I S + +Q RAAAE S Sbjct: 108 DYYTSADYRELYKAGKLTPTAVVEALLPVIRRDTSPPGEFSAGFSQSKIDLVRAAAEAST 167 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R NG ++GIP+ IKD G S + P + S +K + GA+++ Sbjct: 168 QRWANGTPLGPMDGIPVAIKDEVDIDGYDKYLSSKVDFTANPSFTSWCVKKWEEAGAIVI 227 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N G +P T SSGGS AV + ++G D Sbjct: 228 GKTVMHEIGLDTTNNNPVVGTPKNPHNPGYYTGG-----SSGGSGYAVGAGIVPLALGAD 282 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A ++ G + ++ D A+ + ++ D Sbjct: 283 GGGSIRIPSNYCGIYGLKTTHGRVSSAPTRRLATTVGVFGPMASSIDDLAMGYRIMSAPD 342 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAK 298 + P P S +G +G+ K++ ++ P + + + I + +D G + Sbjct: 343 PSNPVSAAFPDPLLSIPSPSSSRGKVIGVYKDW-VERSDPDVLAMFNKAIDYYRDEQGYQ 401 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV+I++P+ + + E SS L++ + I ++ TR I Sbjct: 402 IVDITIPYIPEGGKCHALSILNEISSGLSK------------EQISQLSAPTRII----- 444 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPL 416 + +G ++ Y ++++R L+ + F++ G+ VI TPTTPT+ + Sbjct: 445 ----VSVG----GTQGLAQDYFASQRMRHLLMNHLSFLFQKYPGI-VIATPTTPTAGSKI 495 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 E + S S + + + N G PAIS P E +P+GL +G+ E Sbjct: 496 SGGEADLTNGISDSNATLRSMEYVYLANFTGCPAISCPMGYDDEPSVPVGLMGMGEWGSE 555 Query: 471 ETLF 474 E L Sbjct: 556 EALM 559 >gi|290956663|ref|YP_003487845.1| amidase [Streptomyces scabiei 87.22] gi|260646189|emb|CBG69283.1| putative amidase (aminohydrolase) [Streptomyces scabiei 87.22] Length = 476 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 8/199 (4%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L ++IS+ EL+D ++ I + S +NA I + ARAAA+ +D+R + R L+G+ Sbjct: 17 LDRREISSRELLDLHLDRI--NASHVNAVITRDDEAARAAAQAADERRARNEKRGSLDGL 74 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P+ IKD F T G+ T + + L P ++ +L GAV++GK N + + Sbjct: 75 PLTIKDSFETAGLRTTSGAEDLADHIPERDADAVARLRHQGAVIMGKTNTPAYCQDLHTD 134 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 S +GP ++P K T GGSSGG +AAVA L A +G+D GS+R PA + G Sbjct: 135 NSLFGPTLNP-----HDPKRTAGGSSGGPAAAVAAHLTPADLGSDLAGSLRLPAHYCGVY 189 Query: 195 GIKPTYGRCSRLGIISFAP 213 G++PT+G G I P Sbjct: 190 GLRPTHGLIPARGHIPRPP 208 >gi|221235494|ref|YP_002517931.1| amidase [Caulobacter crescentus NA1000] gi|220964667|gb|ACL96023.1| enantioselective peptide amidase [Caulobacter crescentus NA1000] Length = 528 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 137/481 (28%), Positives = 211/481 (43%), Gaps = 49/481 (10%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCF- 82 E + + I+ N + A I A AA+ D G R L G+PI +KD Sbjct: 58 EATKAALATIQQRNPVLRAVI-ATNPNALTAAKALDAERKAGKVRSALHGVPILLKDNIE 116 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 + + T A S L ++ V ++L D G V+LGK N+ E+A SN + I Sbjct: 117 SADPLPTTAGSLALKDNITGRDAPVAKRLRDAGLVILGKANLSEWANIRSNHS------I 170 Query: 143 SPWRSMDST-------DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S W ++ T D+ GSS GS AAVA L +IGT+T GSI PA+ G VG Sbjct: 171 SGWSAVGGTVRNPYALDRSA-CGSSSGSGAAVAAGLAPLAIGTETDGSITCPAAINGLVG 229 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC--VNLPVPDY 253 +KPT G SR I+ + S D AG +T TV D+A +L IAG D D + DY Sbjct: 230 LKPTVGLVSRTHIVPISHSQDTAGPMTLTVEDTAKVLTIIAGSDPTDPATKEADARKTDY 289 Query: 254 ERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L ++ ++G+T+ + + Y SP D +++ + L+ GA +V++ Sbjct: 290 AAGLSKTALKGVTLAVARFYT--GYSPKTDAVFERALKELEAQGATLVDVKAFDEGPIGR 347 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-----FGQEVKHRIMIGT 367 A ++ E ++LA Y +V + + ++ ++ FGQE R Sbjct: 348 AEGVVLYTELKADLAAYLASTDPKKVPTRTLADVIAFNKATPKEFEWFGQESFERAE--- 404 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT------TPTSAFPLGKEEN 421 + D YL+A + A +G+D IL T PT+ + Sbjct: 405 --KTKGLDDPEYLKA------LADSKRLAGPEGIDKILKDTGAVAIIAPTTGPAWTIDPL 456 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N G Y T +AG P ++VP +P+GL IG + E+ L ++G E Sbjct: 457 N----GDNYGGSSTTLPAVAGYPHLTVPMGDVS-GLPVGLSFIGPAWSEKLLLNLGYAYE 511 Query: 482 K 482 + Sbjct: 512 Q 512 >gi|330808987|ref|YP_004353449.1| amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377095|gb|AEA68445.1| putative amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 458 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 114/452 (25%), Positives = 191/452 (42%), Gaps = 50/452 (11%) Query: 31 IQAIENSNSQMNA----YIEVVAQKARAAAEESDKRIINGD-ARDLEGIPIGIKDCFATK 85 ++A+E + +++ A +I + + +A A S R G A L+G+P+ KD F Sbjct: 29 VKALEETLARVAAVDDVFISLCSARAFREAHSSAARWKAGQPASALDGVPVAWKDMFDVA 88 Query: 86 GIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISP 144 G T A + + P ++ V L G V +GK N+ EFA ++G +P Sbjct: 89 GSPTTAGAAVRRDITPALLDANVVGLLAKAGMVSVGKTNLSEFAYSGLGLNPHFG---TP 145 Query: 145 WRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCS 204 + PGGSS GS+ AVA + ++GTDT GSIR PA+F G VG + + R S Sbjct: 146 HNPVGLDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAFNGLVGFRSSCRRYS 205 Query: 205 RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGM 264 R G+ A +LD G +TR+VRD+ + + G + + + S+ G Sbjct: 206 REGVFPLAHTLDSVGPLTRSVRDALAIDDILCGRTKSTSL------------IPHSLAGR 253 Query: 265 TVGIPKEYRLD-YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS 323 + + D + P + +S LKD GA I P Q L A Sbjct: 254 RFWVDQAVLDDARVEPAVRDNLLNCLSVLKDHGALIDLRPSPAFQATLQLIEQQGWLGAP 313 Query: 324 SNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRAR 383 A + + +L+ TR V+ R+ +S+ + H R R Sbjct: 314 EAFALH-----------QPLLDSDAATR---LDPRVRRRLEAARAFPASQLINLHSARNR 359 Query: 384 KIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAG- 442 +++ T+ + ++TP+ A PL E + ++ ++ T+ + M G Sbjct: 360 -----LQQQMTDELDGA--FLITPSVAHVAPPLSPLEADDELF--VHTNLATLRLTMPGS 410 Query: 443 ---LPAISVPAALCEKKMPLGLQLIGQPFREE 471 LP +S+P+ +P + LI P E+ Sbjct: 411 LLDLPGVSLPSGRDALGLPTSM-LISAPAGED 441 >gi|54025295|ref|YP_119537.1| amidase [Nocardia farcinica IFM 10152] gi|54016803|dbj|BAD58173.1| putative amidase [Nocardia farcinica IFM 10152] Length = 469 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 121/465 (26%), Positives = 187/465 (40%), Gaps = 73/465 (15%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIG 77 ++ +S EL + + N + A AA + R L GIP Sbjct: 26 ARTVSPAELATAALDRARRVNDTLRAV----------AATYPEPRFAPEGRGALSGIPTY 75 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IKD G+ TQ S + VT++ G +LGK + EF + + E + Sbjct: 76 IKDNVDVAGLPTQHGSVAFTAPAARRDGRVTRQFLATGVTVLGKSRLPEFGLTPTTEFAT 135 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 P +PW S PGGSSGG++A VA + + G D GGSIR PA+ G VG+K Sbjct: 136 QEPARNPWHLNHS-----PGGSSGGAAALVASGVVPLAHGNDGGGSIRIPAACAGLVGLK 190 Query: 198 PTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 + GR P +L G++TRTVRDSA L A Y N +P Sbjct: 191 TSRGRLLDSEQTRLMPLNLVSEGVLTRTVRDSAAFLAAAERYHR------NPALPPIGEV 244 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + +++ + +G+ E SPT +D+ + +A A+I+E A Sbjct: 245 MGPAMRRLRIGLVTE------SPTGAVVDEPTMAAV----EATARILEK----------A 284 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 +I+ P R+ + + + ++ T GFG ++ + Sbjct: 285 GHIVEPTSPPVT-TRF---VHDFTLYWAFLADVLTTTGRFGFG---------ASWNTADA 331 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGV-----------DVILTPTTPTSAFPLGKEENN 422 + + LRA RTL + + DVIL+P +A LG Sbjct: 332 EHATRGLRAYHRRTLHQTPAALRRLRRFRHVYDTWLARHDVILSPVVAHTAPELGYFAGT 391 Query: 423 SGS---MGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 S + + N V FT N+AG PAI++PA L +P+ + L Sbjct: 392 SSFDELLARMANFVSFTPVNNVAGSPAIAIPAGLSPDGLPVAIHL 436 >gi|259488162|tpe|CBF87407.1| TPA: amidase family protein (AFU_orthologue; AFUA_6G14410) [Aspergillus nidulans FGSC A4] Length = 442 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 126/489 (25%), Positives = 205/489 (41%), Gaps = 65/489 (13%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++S ++ +S S + IE+ + + A+ + ++ A + D+ I Sbjct: 6 LTATQSLPLIQDAKLSVENYARSLLSRIESRDPTVQAWAYLNPEQVLEQARQLDRVPI-- 63 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 D R L G+PIG+KD TK + T+ S + ++ L GA++ GK Sbjct: 64 DQRGPLHGVPIGVKDVIYTKDMPTEHNSPLYKDSNVPVDAASIAILRAAGALIFGKTTTT 123 Query: 126 EFAMGSSNETSYYGP-VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 EFA + GP I+P S+ TPGGSS GS AAVA F ++GT TGGS Sbjct: 124 EFA------SVTIGPKTINP-HSLPPNSIRTPGGSSSGSGAAVADFHVPLALGTQTGGST 176 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 +P SF G KPT+G SR G ++ +LD GI R V D LK +AG Sbjct: 177 IRPGSFNGIYAFKPTWGAVSREGQKVYSLTLDTLGIFARGVGD----LKLVAGV------ 226 Query: 245 CVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 L + D ++ +S++G G+ K P ++ L+ GA + ++ Sbjct: 227 ---LGIKDDQKPRKAESLKGEKFGLVKGPVWGLAGPGTINAMEKARCLLQAHGAIVEDVE 283 Query: 304 LPHTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 LP +P ++ I++ ++ L+ Y + L+ ++ EN QE+ Sbjct: 284 LPPEFDNMPDWHAKIMAADGRTTFLSEYRMDKNKLQ---DFLVNQVENINGWTHAQEIA- 339 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 +D + TL R + +LTP+ P A P G Sbjct: 340 ------------AFDG-------VATL--RPVIDDIANRYSALLTPSVPDEA-PEGTLRT 377 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS----VG 477 S + ++ + T P +++P MP+GL L+ F +E L S VG Sbjct: 378 GSAAFNGMWTALHT--------PVVNIPGFQGTNGMPIGLSLVAARFHDEHLLSVAEAVG 429 Query: 478 QIIEKEAGY 486 + E E G+ Sbjct: 430 AVFEAEGGW 438 >gi|300861983|ref|ZP_07108063.1| amidase [Enterococcus faecalis TUSoD Ef11] gi|300848508|gb|EFK76265.1| amidase [Enterococcus faecalis TUSoD Ef11] Length = 528 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 117/444 (26%), Positives = 200/444 (45%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q+ + A + D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQEIKEA-KAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + ++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQTLILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSAASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDVA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + ++ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKAIQKAGAEVIPLT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|163794089|ref|ZP_02188062.1| Amidase [alpha proteobacterium BAL199] gi|159180703|gb|EDP65222.1| Amidase [alpha proteobacterium BAL199] Length = 466 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 134/273 (49%), Gaps = 17/273 (6%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M L+ + +E K +S VE+ D+ + IE NA + AR AA S+ Sbjct: 1 MLPLHALTAAELTQAYADKSLSPVEVADAALARIEAWEPHANALYRIHHDGARTAAIASE 60 Query: 61 KRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R G L+G+PI +K+ TKG I D ++ ++ + G V+L Sbjct: 61 ARWRAGKPLSPLDGVPITLKENITTKGDPAPIGVAIGDLTPKTEDAPAAARVREAGCVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M ++ M SS +S +G +PWR D+ P GSS G+ AA IGTD Sbjct: 121 GKTTMPDYGMLSSGRSSLHGTTRNPWR----LDR-NPAGSSSGAGAAAVAGYGPLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGY 238 GGS+R PA G G+KP+ GR + + P + + AG +TRTVRD+A+L+ + G Sbjct: 176 IGGSVRLPAHHCGLFGLKPSLGR-----LPVYPPFMGRAAGPMTRTVRDAAMLMSVVTGP 230 Query: 239 DECDATCVNLP--VPDYERALD-QSIQGMTVGI 268 D D +NLP DY L+ S +G+ +G+ Sbjct: 231 DVRD--YMNLPHQPVDYAGELEGLSAKGLRIGL 261 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 42/81 (51%) Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 D +L+P P ++P N S + + +TVA N + PA SV +P+G+ Sbjct: 373 DFVLSPVAPIVSYPADAHSPNEDSHNALAHIAYTVAYNFSEQPAASVNWTFTGDGLPVGV 432 Query: 462 QLIGQPFREETLFSVGQIIEK 482 Q++GQ F + + + ++IE+ Sbjct: 433 QVVGQRFDDLGVMRLSRLIEQ 453 >gi|295677303|ref|YP_003605827.1| Amidase [Burkholderia sp. CCGE1002] gi|295437146|gb|ADG16316.1| Amidase [Burkholderia sp. CCGE1002] Length = 459 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 113/415 (27%), Positives = 182/415 (43%), Gaps = 41/415 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTV-TQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F +G T+A S +L P V +L GAV++G+ NM EFA Sbjct: 75 LAGIPVSVKDLFDIEGQQTRAGSVVLADAPPAKADAVAVARLKRAGAVIVGRTNMSEFAF 134 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +SP+R D+ GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 135 SGLGLNPHYGHPLSPYRRGVKGDERVSGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 194 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + Sbjct: 195 LCGLTGFKPTAARIPKQGGVPLSSTLDSFGPIGVSVACCALVDRMLAGLE---------- 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-PHTQ 308 P A + ++G+ +G+ + D + P + + + L+ AGA + E+ P + Sbjct: 245 -PRIPAA--RPLEGVRLGVLTNFVTDGVEPEVARAIDTALKHLEAAGAIVSEVRFAPLDR 301 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A + SP EA + + +L+ + + V RIM G Sbjct: 302 LAEINRFGFSPIEAYA--------------WHRPLLDKHREQ----YDPRVLVRIMKGQP 343 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + YL R + + Q D ++ PT P L + + GH Sbjct: 344 ATAV-----DYLDLLAERAAMLDEAARTLWQRFDAVVAPTVPVVPPRLADLLTDDDTFGH 398 Query: 429 IYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + A N A+S+P L P+GL + G P ++ L ++G+ E Sbjct: 399 TNALILRNPSAFNFLDSCALSLPCHL-RGDAPVGLMMAGAPHADDALLAIGRAAE 452 >gi|226309368|ref|YP_002769328.1| amidase [Rhodococcus erythropolis PR4] gi|226188485|dbj|BAH36589.1| putative amidase [Rhodococcus erythropolis PR4] Length = 492 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 117/462 (25%), Positives = 208/462 (45%), Gaps = 45/462 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA-AEESDKRIINGDARD-LEG 73 +R +++S VE++DS++ IE N +NA + + ++A A A E D ++ +G + G Sbjct: 33 IRRREVSCVEVMDSFLDQIEVHNPAVNAIVALRDREALTAEARERDSQLASGQYLGWMHG 92 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +KD A KG+ + S + + +++ GA+++GK N EF +GS Sbjct: 93 FPHAVKDLSAAKGLPFTSGSPMFADRIAEEDDLFVKRIKSAGAIVIGKTNTPEFGLGSQT 152 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 +G +SP+ + T GGSSGG++A++A + + G+D GS+R P++F Sbjct: 153 YNPVWGTTVSPY-----DNSRTAGGSSGGAAASLALRMLPVADGSDYMGSLRNPSAFNNV 207 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG +P++GR G I+ + G + RTV D A LL +AG D + + Sbjct: 208 VGFRPSWGRIPETGFIAQGAVV---GPMGRTVTDVAHLLSTMAGPDAYAPLGIRENPAVF 264 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 +L + ++G + ++ YL+ + G+ L ++ ++ E + ALP Sbjct: 265 TESLARDLKGSRIAWVGDWN-GYLAT------EPGVLELCESSFEVFEQLGCRVEAALPD 317 Query: 314 YYIISPAEASSNLARYD-GVRYGLRVEGKD--ILEMYENTRSIGFGQEVKHRIMIGTYVL 370 + P + R+ + GL + D + E+ + G V + T Sbjct: 318 F---KPEDIWQLFLRWRWWAQLGLIDQYNDPSLRELMKPELLWELGHAVTLSALDVTKAA 374 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE----ENNSGSM 426 +R + +L A T+ FE D IL P+ FP K E G Sbjct: 375 EAR---NGWLSA----------ITKMFET-YDYILAPS--AQVFPFDKNTHWPETVDGRS 418 Query: 427 GHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQLIGQ 466 Y+ V MAG+P +P ++ +P+G+Q+IG+ Sbjct: 419 MDTYHRWMETVVPWTMAGVPVAGMPVGFDDRSLPMGIQIIGR 460 >gi|163795368|ref|ZP_02189335.1| hypothetical protein BAL199_14657 [alpha proteobacterium BAL199] gi|159179354|gb|EDP63885.1| hypothetical protein BAL199_14657 [alpha proteobacterium BAL199] Length = 223 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 6/191 (3%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L F + R+ +R+K +S ELVDS I E N ++NA AR AA+ S+ R Sbjct: 11 DLCFTPATTLRELIRAKQLSPTELVDSVIARAEALNPRLNAICTPTFDAARDAAKRSEGR 70 Query: 63 IINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I G+ R LEGIP+ IKD TKGI + A S+I + P ++ + +++ + GAV++GK Sbjct: 71 IAGGEHLRPLEGIPVTIKDLVMTKGIRSMAGSYIFEHRVPESDAPIVERVREAGAVVIGK 130 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 E ++ G +PW+ + GGSS G++ A + G+D Sbjct: 131 TTTPELGWKGCGDSPLTGISHNPWK-----HGYNAGGSSTGAAICAAAGIGPLHQGSDGA 185 Query: 182 GSIRQPASFTG 192 GSIR PASF G Sbjct: 186 GSIRMPASFCG 196 >gi|330964507|gb|EGH64767.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 457 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+P+ KD F G T A + + + P ++ L G V LGK N+ EFA Sbjct: 74 DGVPVAWKDLFDVAGCVTTAGATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P DS+ + PGGSS GS+ AVA + ++GTDT GSIR PA+F Sbjct: 134 GLGLNPHFGTPINP--KSDSSPRI-PGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|312217916|emb|CBX97863.1| similar to glutamyl-tRNA(Gln) amidotransferase subunit A [Leptosphaeria maculans] Length = 587 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 126/517 (24%), Positives = 221/517 (42%), Gaps = 66/517 (12%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAI-----ENSNSQMNAYIEVVAQKARAAA 56 S+ F + + D S + ++V++ + I + A++E A+ R AA Sbjct: 104 SDTRFYTIQDFHDAYASGATTPTDVVEALLPLILRNGDHKKRTLATAFMESKAELIRQAA 163 Query: 57 EESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDN 114 ES +R G L+G+P G+KD A KG +H S +K+ + Sbjct: 164 AESTQRWKQGQPLGILDGVPFGVKDDLAIKGYKRYIGTTHDYTDGGDKETSWCAKKVEEA 223 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GA+++GKL M E M ++N +G ++P+ + + GGSSGG+++AV + Sbjct: 224 GAILVGKLTMHELGMDTTNNNPNWGTPLNPY-----NNSYYTGGSSGGAASAVGYGIIPF 278 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 +IG+D GGS+R P+ + G G+K ++ R S + S+ G + + D I + Sbjct: 279 AIGSDGGGSVRIPSCYCGLYGLKTSHARVSVAPMPDAGKSVTVRGPLASNMSDLEISYRV 338 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQG---MTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +A D + P + I G +GI K + LD P + + Q + + Sbjct: 339 MAQPDPTHYPSSDFSPP-------KKISGPRPKVIGIYKAW-LDRADPAVQEACQSALQY 390 Query: 292 LK-DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 K + G + V+I++P LP I A A + LA E Sbjct: 391 FKSELGYETVDITIP----LLPQGQI---AHAMTILA-----------------EGASGH 426 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILTPTT 409 RS + +R+++ ++ + + +L A+++R ++ + VI+TPTT Sbjct: 427 RSSIYDLTSPNRVLMS---VAKQTPATDFLLAQRVRNILMEHLAHLYRTHPGLVIVTPTT 483 Query: 410 PTSAFPLGKEENNSG-SMGH--IYNDVFTVAVNMAGLPAISVPAALCE-----KKMPLGL 461 P + +P+ E + G S G+ + N + N G+P I P + K+P+G+ Sbjct: 484 PNAGWPIEDGELSYGVSNGNQQLRNMEYAWLANFTGIPCIQFPVGYVDGVKGAGKVPIGM 543 Query: 462 QLIGQPFREETLFSVGQIIEK------EAGYFRPHKW 492 G+ E+ L G EK G RP W Sbjct: 544 SGHGEWGSEDALIEFGFDGEKFLQEGYAGGRLRPEGW 580 >gi|70992933|ref|XP_751315.1| amidase family protein [Aspergillus fumigatus Af293] gi|66848948|gb|EAL89277.1| amidase family protein [Aspergillus fumigatus Af293] Length = 582 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 144/525 (27%), Positives = 215/525 (40%), Gaps = 75/525 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + ++ L S ++ ++L+ Y+ I ++S +NA ++ A A A D Sbjct: 57 QLEEATIDNLQEYLSSGKLTTLQLLHCYLDRISQTDSYLNAILQH-NPDASAIANALDLE 115 Query: 63 IINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G R L GIP +KD ATK + T A S L G ++ V ++L + GA++LG Sbjct: 116 RARGRVRGPLHGIPFTVKDNIATKDRMETTAGSWALLGSVVPRDAFVVRRLREAGALLLG 175 Query: 121 KLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K + E+A M S+N + Y RS + PGGSS GS AV L ++GT+ Sbjct: 176 KAALSEWADMRSNNYSEGYSARGGQCRSAFNL-TVNPGGSSSGSGVAVGANLVPFALGTE 234 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ PA VGIKPT G SR G+I + D G+ +TVRD+ +L AI G D Sbjct: 235 TDGSVINPAQRNAVVGIKPTVGLTSRDGVIPESLHQDTVGVFAKTVRDATYILDAIHGVD 294 Query: 240 ECD----ATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D A PV Y + L S++G G+P E P + + ++ Sbjct: 295 PRDNYTLAQNGRTPVGGYAQYLSDRSSLKGAVFGLPWESVWRLGDPDQISQLMKLLDLIR 354 Query: 294 DAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLARYDGVRYGLRVEGKDI 343 AGA I+ PH + I+SP N + Y V+ + K Sbjct: 355 AAGATIINGTEFPHYR------QIVSPDGWDWDYGSRRGYPNESEYTYVKVDFYNDIKAY 408 Query: 344 LEMYENT--RSI---------GFGQE-----VKHRIMIG-----TYVLSSRCYDSHYLRA 382 L NT RS+ FG E V G + + D Y +A Sbjct: 409 LSELNNTNMRSLEDLVEYNKANFGMEGGFPGVHPAFGSGQDGFEASLATKGVMDKTYWQA 468 Query: 383 RKI--RTLIKRDFTEAFEQG---VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA 437 + RT + A + G +D +L P + + + Sbjct: 469 LEFCRRTTREEGIDAALKHGNRTLDGLLVPPDVAQSIQIAAQ------------------ 510 Query: 438 VNMAGLPAISVPAALC-EKKMPLGLQLIGQPFREETLFSVGQIIE 481 AG P +++PA + E MP GL ++ F E TL IE Sbjct: 511 ---AGYPVLTIPAGVSDESGMPYGLAIVQTAFAEPTLIKYASAIE 552 >gi|260905667|ref|ZP_05913989.1| Amidase [Brevibacterium linens BL2] Length = 434 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 6/224 (2%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCFATK 85 ++ + A+E +NA V+ +AR ++S +R G LEGIP +KD Sbjct: 4 LEQTLAAVEGIGRDLNAVTSVMGDRARTLEKKSAERAAAGGEARALEGIPFAVKDVIDVA 63 Query: 86 GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPW 145 G T S++ G P + V L GA+ + K N E++ G + S +G VI+P Sbjct: 64 GFPTTMGSNVSSGPDPSASAPVVSLLERAGALPVVKTNCQEYSYGILGDESAFGRVINPV 123 Query: 146 RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSR 205 T GGSS GS+A VA + ++GTDT GS+R PA+ G +G KPT+G S Sbjct: 124 DPALCT-----GGSSSGSAALVAAGVVPLALGTDTAGSVRVPAACQGVIGFKPTFGTVSA 178 Query: 206 LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G+ +PS D G+ R + + I+G + V+ P Sbjct: 179 EGVFPLSPSFDTVGLFARDLPLLTAAFRVISGNGADASPAVSSP 222 >gi|260430390|ref|ZP_05784363.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Citreicella sp. SE45] gi|260418419|gb|EEX11676.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Citreicella sp. SE45] Length = 422 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 128/475 (26%), Positives = 208/475 (43%), Gaps = 69/475 (14%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +++ R L + ++ LV++++ I + ++ AY+ V A ARAAA ++ G Sbjct: 11 SIATLRKALDAGQVTQGALVEAHLARIAERDGEIGAYVHVDADGARAAATAPVAGLLGG- 69 Query: 68 ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 IP G+KD G+ + S I G P +++ L GA++LGK EF Sbjct: 70 ------IPFGVKDVLDVAGMPCEQGSVIYKGHVPPFDAGSVAMLKQQGAIVLGKTATAEF 123 Query: 128 AMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 A + T ++P +D+ TPGGSS GS AAVA + ++GT TGGS+ +P Sbjct: 124 AGTAPAAT------VNP---LDTAR--TPGGSSSGSGAAVAAGMAVFALGTQTGGSVLRP 172 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G G KPT+G G++ A S D G I R+ D A + A+ AT + Sbjct: 173 AAFCGVAGFKPTFGAWPVSGMLPAAQSFDTVGAIARSAEDLAWVHAAMMRLSAPGATG-D 231 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 LPV +G+ + + D LS + L AGA+++++ L Sbjct: 232 LPV---------------IGLCRTHLWDTLSELSAGAVEAARGLLSRAGAQVIDLPLAPG 276 Query: 308 QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 L + I++ E S N A + +R E +++ E+ I Sbjct: 277 FAELTQHRAIVNAFERSGNTACFAAELDRIRPESREVFSRGES-------------IDGE 323 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 TY++S R D R + F EA V+LT T P A P G E+ + Sbjct: 324 TYLVSRRALDV-------ARAAVDTLFGEA-----GVLLTATVPDVA-PSGLEKTGDPRL 370 Query: 427 GHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +++ + P+I+VP +PL +QL+ +P + L V + +E Sbjct: 371 QELWSTLRC--------PSIAVPFGHAPSGLPLSVQLVARPNEDALLLDVARQLE 417 >gi|328543589|ref|YP_004303698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [polymorphum gilvum SL003B-26A1] gi|326413334|gb|ADZ70397.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum SL003B-26A1] Length = 607 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 18/244 (7%) Query: 68 ARDLE-----GIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 ARDL G+P +KD G+ T A C L + P ++TV +L GA+++GK Sbjct: 80 ARDLTLKPLWGVPFAVKDNIDVAGMPTTAACPDYL--YHPAEDATVVARLKAAGAIVVGK 137 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G S Y P+ P ++D PGGSS GS+ AVA + S+GTDT Sbjct: 138 TNLDQFATGLVGVRSPY-PI--PRNAVDPA--LVPGGSSSGSAVAVAQGIVTFSLGTDTA 192 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA+ VG+KP+ G S G++ +LD I TV D+ A +D Sbjct: 193 GSGRVPAALNDLVGLKPSLGSLSATGVVPACRTLDTVSIFAHTVEDAYAAFAVAAAHDPA 252 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDK-TWQQGISWLKDAGAKIV 300 DA + P L + VG+P+ + + + ++ ++ + GA+IV Sbjct: 253 DAYSRHRPA----GPLAAWPARLAVGVPRADQRRFFGDAVQADSYTATLADIAARGAEIV 308 Query: 301 EISL 304 EI Sbjct: 309 EIDF 312 >gi|196041911|ref|ZP_03109199.1| amidase family protein [Bacillus cereus NVH0597-99] gi|196027283|gb|EDX65902.1| amidase family protein [Bacillus cereus NVH0597-99] Length = 536 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ V ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|302413167|ref|XP_003004416.1| amidase [Verticillium albo-atrum VaMs.102] gi|261356992|gb|EEY19420.1| amidase [Verticillium albo-atrum VaMs.102] Length = 609 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 133/506 (26%), Positives = 215/506 (42%), Gaps = 89/506 (17%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMN----AYIEVVAQKARAAAEESDKRIINGDA 68 R + S +++ +++ + + I S A+IEV A+ AAE S R + Sbjct: 100 RSQYLSGELTPLDVAHAILPLIRRDTSPPGEHSVAWIEVHAELVLRAAEASTIRYNEKRS 159 Query: 69 R-DLEGIPIGIKDCFATKGIHT-QACSHILDGFR---PHYESTVTQKLW------DNGAV 117 L+G+P +KD + G T Q H F P V Q W + GAV Sbjct: 160 LGPLDGVPTAVKDEYDVLGYRTTQGGIHDYAEFLEVGPGARGNVGQPSWCVSKLEEAGAV 219 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 + GKL++ EF M ++ ++G +P+ + GGSS G AVA + S+G Sbjct: 220 IYGKLSLHEFGMDTAGYNIFHGTPRNPYDP-----SYYTGGSSSGCGYAVATGIVPLSMG 274 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDS-AILLKAIA 236 D GGSIR PASF G+KPT+GR +SF P + +G T VR A ++++ Sbjct: 275 ADGGGSIRLPASFCSVFGLKPTHGR------VSFYPGQNHSG--TAAVRGPIASDMRSLV 326 Query: 237 GYDECDATCVNLPVPDYE------RALDQSIQGMTVGIPKEYRLDYLS---PTIDKTWQQ 287 E + VPD + + D S +G I + +D++S P + K Q Sbjct: 327 ALYEVTS------VPDPQSFFPPAKPFDFSSEGEQTKI-LGFPIDWISRADPEVQKICQN 379 Query: 288 GISWLKD-AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM 346 I L D G +V I +P A+ I +ASS + G+ R+ +L + Sbjct: 380 LIDRLVDQKGYTVVPIDIPLVAEGQIAHAITLLTDASSLVQSTKGISPANRI----LLAL 435 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VIL 405 T + F L A+K+R ++ + ++Q +I+ Sbjct: 436 GRTTPAWDF------------------------LLAQKLRRVLMEHLSWLWQQHPGMIIV 471 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDVFTVA----VNMAGLPAISVPA--ALCEKK--- 456 TPT+ ++ +P+ E+ + + T+ N G+P+I+VPA A+ E K Sbjct: 472 TPTSASAGWPIRNEKELKYGISDGDQTMKTMEYVWLANYCGVPSITVPAGYAMAEGKTGS 531 Query: 457 -----MPLGLQLIGQPFREETLFSVG 477 +P+GL G+ EE L G Sbjct: 532 AVSPTVPVGLMGTGEWCSEEALLRFG 557 >gi|148553810|ref|YP_001261392.1| amidase [Sphingomonas wittichii RW1] gi|148499000|gb|ABQ67254.1| Amidase [Sphingomonas wittichii RW1] Length = 452 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 115/446 (25%), Positives = 188/446 (42%), Gaps = 52/446 (11%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRP 101 AY ++A AR A +D R G+A L+G + +K +G+ T A S L G P Sbjct: 29 AYTHILAGTARGEARAADGRADRGEAIGALDGALVSVKAMLDVQGLLTDAGSATLRGRPP 88 Query: 102 HY-ESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSS 160 +S+V +L GAV++G M EFA + + + +P + + GGSS Sbjct: 89 AASDSSVVSRLRSAGAVVVGTTQMTEFAFSAVGTNPNFPALGNPHDA-----ERICGGSS 143 Query: 161 GGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGI 220 G++ +V G L +IG+DTGGS+R PA+ G VG KPT R G + +LD G Sbjct: 144 SGAAVSVGGGLADIAIGSDTGGSLRIPAALCGLVGFKPTASRVPAAGSFPLSQTLDSIGP 203 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 I R+V+ A+ +A D + + D R + + + + Sbjct: 204 IARSVKLCALADSVLATGKASDVAAIGV---DRFRLV----------VARGRLFEGCDQA 250 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALP---AYYIISPAEASSNLARYDGVRYGLR 337 + + I L+ + +I + SL L P E ++ L R G+ Sbjct: 251 VLDAFDGAIDHLRRSDVRISDGSLEPILDELARIDGLGTFPPVELAATL-RSSGI----- 304 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF 397 D+ + NTRS RI G+ + + YL ++R + F + Sbjct: 305 ---TDLAPVDPNTRS---------RIEAGSGLSA-----VDYLEMARLRRQLADGFERSM 347 Query: 398 EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEK 455 E G +V + PT P A P ++ I + N+ P+IS+P L + Sbjct: 348 EDG-EVYVVPTVPIVA-PTTSSVSDPEQFRRINALLLRNPRVANLLDCPSISIP--LPSR 403 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIE 481 +P+G+ LIG+ + L S+ +E Sbjct: 404 GLPVGMMLIGRRNADRHLLSIALRLE 429 >gi|169628764|ref|YP_001702413.1| amidase [Mycobacterium abscessus ATCC 19977] gi|169240731|emb|CAM61759.1| Putative amidase AmiA2 [Mycobacterium abscessus] Length = 466 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 136/484 (28%), Positives = 207/484 (42%), Gaps = 49/484 (10%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 S+V L + + AI++S S +NA+ V + A A A E+DKR+ G+ L G+PI IKD Sbjct: 20 SSVSLTLTALNAIKSSQSTLNAFRVVCTKTALAEATEADKRLARGERLPLLGVPIAIKDD 79 Query: 82 FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPV 141 G T + G ++ + ++L GAV++GK N E +G Sbjct: 80 TDLAGTPTAFGTAGAVGSE-SEDAELVRRLRAAGAVIVGKTNTCELGQWGFTSGPGFGHT 138 Query: 142 ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYG 201 +PW + TPGGSSGGS+AAVA L A +IG+D GS+R PA++T +GIKP G Sbjct: 139 RNPW-----SRGHTPGGSSGGSAAAVAAGLVAGAIGSDGAGSVRIPAAWTHLIGIKPQRG 193 Query: 202 RCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD--- 258 R S + G + RTV D+A+LL A +G D L P + R LD Sbjct: 194 RISTWPFAEAFNGITVHGPLARTVADAALLLDAASGNVPGD-----LHKPPHVRVLDAVH 248 Query: 259 ----QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 Q +++ +P L PTI+ + L+ G + E P L Sbjct: 249 EDPGQLRVALSLKVPFSGFPAQLHPTIEAATRYVAHQLRSLGHMVSEGD-PDYGVGLGLN 307 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 ++ P + L D + G + + + M R G+ Sbjct: 308 FL--PRATAGLLPWRDRLDAGAHWDPRTVTNMRTGRRLAGWALR---------------- 349 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT---PTSAFPLGKEENNSGSMGHIYN 431 RAR ++ + F +V+L PTT PT + + + G + Sbjct: 350 ------RARAAEPRLQARVGKIFGS-FNVVLAPTTAQPPTGIYDFDDVGSLATDRGQVGA 402 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR--P 489 T N+ G P+I+VPA +P+G+QL+G E L S+ +E + P Sbjct: 403 CPMTWPWNVLGWPSINVPAGFTADGLPIGVQLMGPANSEPLLISLAAQLESINNWASEIP 462 Query: 490 HKWW 493 WW Sbjct: 463 DPWW 466 >gi|218903074|ref|YP_002450908.1| amidase family protein [Bacillus cereus AH820] gi|228927016|ref|ZP_04090082.1| Amidase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|218537837|gb|ACK90235.1| amidase family protein [Bacillus cereus AH820] gi|228832751|gb|EEM78322.1| Amidase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 536 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 133/275 (48%), Gaps = 33/275 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ V Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVTADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GT+T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSIQGM 264 A+ GYDE D + V D ER D SI G+ Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|16126712|ref|NP_421276.1| amidase [Caulobacter crescentus CB15] gi|13424024|gb|AAK24444.1| amidase family protein [Caulobacter crescentus CB15] Length = 497 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 137/481 (28%), Positives = 211/481 (43%), Gaps = 49/481 (10%) Query: 25 ELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIPIGIKDCF- 82 E + + I+ N + A I A AA+ D G R L G+PI +KD Sbjct: 27 EATKAALATIQQRNPVLRAVI-ATNPNALTAAKALDAERKAGKVRSALHGVPILLKDNIE 85 Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 + + T A S L ++ V ++L D G V+LGK N+ E+A SN + I Sbjct: 86 SADPLPTTAGSLALKDNITGRDAPVAKRLRDAGLVILGKANLSEWANIRSNHS------I 139 Query: 143 SPWRSMDST-------DKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 S W ++ T D+ GSS GS AAVA L +IGT+T GSI PA+ G VG Sbjct: 140 SGWSAVGGTVRNPYALDRSA-CGSSSGSGAAVAAGLAPLAIGTETDGSITCPAAINGLVG 198 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC--VNLPVPDY 253 +KPT G SR I+ + S D AG +T TV D+A +L IAG D D + DY Sbjct: 199 LKPTVGLVSRTHIVPISHSQDTAGPMTLTVEDTAKVLTIIAGSDPTDPATKEADARKTDY 258 Query: 254 ERALDQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 L ++ ++G+T+ + + Y SP D +++ + L+ GA +V++ Sbjct: 259 AAGLSKTALKGVTLAVARFYT--GYSPKTDAVFERALKELEAQGATLVDVKAFDEGPIGR 316 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-----FGQEVKHRIMIGT 367 A ++ E ++LA Y +V + + ++ ++ FGQE R Sbjct: 317 AEGVVLYTELKADLAAYLASTDPKKVPTRTLADVIAFNKATPKEFEWFGQESFERAE--- 373 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT------TPTSAFPLGKEEN 421 + D YL+A + A +G+D IL T PT+ + Sbjct: 374 --KTKGLDDPEYLKA------LADSKRLAGPEGIDKILKDTGAVAIIAPTTGPAWTIDPL 425 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N G Y T +AG P ++VP +P+GL IG + E+ L ++G E Sbjct: 426 N----GDNYGGSSTTLPAVAGYPHLTVPMGDVS-GLPVGLSFIGPAWSEKLLLNLGYAYE 480 Query: 482 K 482 + Sbjct: 481 Q 481 >gi|156546438|ref|XP_001607190.1| PREDICTED: similar to amidase [Nasonia vitripennis] Length = 535 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 113/500 (22%), Positives = 212/500 (42%), Gaps = 58/500 (11%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DA 68 E ++R K ++A E+V + I+ + N +N+ +E + A A+E D + + D Sbjct: 71 ELAKKIREKKVTAEEVVKACIERCKEVNGLLNSVVEDRYEDAIKQAKEVDVMLKDEKLDI 130 Query: 69 RDLE------GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 +LE G+P K+ KG+ + G R ++TV + + GA+++GK Sbjct: 131 EELEKTKPLLGVPFTTKESNEAKGMLHSMGTLSRKGHRSDEDATVIENVKKAGAIIIGKT 190 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ E + YG +P+ + T GGSSGG ++ VA ++G+D GG Sbjct: 191 NIPELNQWIESRNKVYGQTNNPYNTTR-----TVGGSSGGDASIVAACGVPFAVGSDIGG 245 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGI----ISFAPSLDQAGIITRTVRDSAILLKAIAG- 237 S+R P++ G G+KP+ G S GI + S+ + G + + D +L K ++G Sbjct: 246 SVRIPSACNGVFGLKPSEGMTSLKGIGLRKKVYEDSMAEVGPLCKKAEDLELLTKILSGT 305 Query: 238 --YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D + VNL + L+ Q + + R LS K + + + Sbjct: 306 FLKTSLDNSSVNL------KDLNIFYQESS----GDLRASKLSSAASKALSKAVRHFEQV 355 Query: 296 GAKIVEISLPHTQYA--LPAYYIISP-AEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 ++ LP ++Y+ L Y++ A+ ++L +G R E IL+ Sbjct: 356 TGNATKVKLPGSEYSYRLWRYWMTQEDADFKTDLTNGNG-RTSAVAEITKILKGNNEITL 414 Query: 353 IGFGQEVKHRIM---IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 + + H I G + AR + + +K E + V+L PT Sbjct: 415 AALLKLIDHDIFPQEKGEW-------------ARAVTSTMKEYLLEKLKDN-GVLLYPTF 460 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 ++ + + S ++ + N+ LP VP L + +P+G+Q++ P Sbjct: 461 NSARY-------HYASFVSPFSFGYWAIFNVLKLPVCQVPMGLDDSGLPVGVQVVAAPNN 513 Query: 470 EETLFSVGQIIEKEAGYFRP 489 ++ +V + +E+ G + P Sbjct: 514 DKLCIAVAKELERVFGGWVP 533 >gi|87198629|ref|YP_495886.1| amidase [Novosphingobium aromaticivorans DSM 12444] gi|87134310|gb|ABD25052.1| Amidase [Novosphingobium aromaticivorans DSM 12444] Length = 589 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 120/418 (28%), Positives = 191/418 (45%), Gaps = 51/418 (12%) Query: 54 AAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 AAA D R+ G+ L G+P +KD G HT A +RP +TV ++L Sbjct: 56 AAARAIDVRLAAGEDLPLAGVPFAVKDNIDVAGFHTTAACPAF-AYRPATSATVVERLLA 114 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA+ +GK N+D+FA G + S YG +P + + + GGSS GS++AVA L A Sbjct: 115 AGALCVGKTNLDQFATGLNGTRSPYG---APRNAHNLA--YVSGGSSSGSASAVAAGLVA 169 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK 233 ++GTDT GS R PA+F VG KP+ GR S G++ +LD + D+ I+ Sbjct: 170 FALGTDTAGSGRVPAAFQHLVGFKPSKGRWSNRGLVPACRTLDCITVFAHDTADARIVDG 229 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP-KEYRLDYLSPTIDKTWQQGISWL 292 +AG+D DA + P+ D R + +G+P ++ R + + + + + L Sbjct: 230 IVAGFDPADA--FSKPLADRPRKM------RAIGVPRRDQRAFFGDVEAEHLYDRALDRL 281 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISP--AEASSNLARYDGVRYGLRVEGKDILEMYENT 350 G +IVEI Q A Y P AE ++ LA GL + D L+ Sbjct: 282 STLG-RIVEIDYAPLQEAAQLLY-GGPWVAERTAALA-------GLLADNPDALD----- 327 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 V+ + G + + ++ Y A +KR + + +D++ PTT Sbjct: 328 ------PTVREVVAPGQDIGAVDLFNGIYRLAE-----LKR-HADTLWESIDLLAFPTTG 375 Query: 411 TS---AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 T+ A L + ++G+ +T VN+ + A++VPA G+ LIG Sbjct: 376 TTYRVAELLAAPIALNSALGY-----YTNFVNLLDMAALAVPAGSRANATGFGVTLIG 428 >gi|84502912|ref|ZP_01001025.1| amidase [Oceanicola batsensis HTCC2597] gi|84388895|gb|EAQ01765.1| amidase [Oceanicola batsensis HTCC2597] Length = 475 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 121/475 (25%), Positives = 203/475 (42%), Gaps = 43/475 (9%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L + +E L ++I+A E + + + I N +NA + + + A E+ R Sbjct: 3 LTDLDAAELLSGLAEREITAREAMRACLDRIAAVNPGINAVVALRDEATLMAEAEAADRA 62 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 G L G+PI IKD +GI + S IL FRP + ++ GA+++GK N Sbjct: 63 --GPRGPLHGLPIAIKDSANARGIVSAFGSPILKDFRPAQDDLYVARIRAAGAIIIGKTN 120 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF +GS YG +P+ S SSGG++AA+A + S G+D GS Sbjct: 121 TPEFGLGSHTRNPVYGATGNPYDPGRSAGG-----SSGGAAAALATRMQWLSDGSDMMGS 175 Query: 184 IRQPASFTGTVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 +R PA + G +P+YG F + +G + R+ D A+LL +AG Sbjct: 176 LRNPAGWCNVYGFRPSYGLVPGEEEKELFMSPVVTSGPMARSPGDLALLLDVMAG--AAP 233 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVE 301 + Y L ++G +G + + + + T + ++ +D G ++V Sbjct: 234 GVPFSHSGQRYSGHLQADVRGRRIGWLGNWGGAWPMEEGVLDTCEAALATFEDLGCEVVA 293 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 + P L ++ A A S + +Y+N Q + Sbjct: 294 LDPPFPAADLWQAWLDLRAFAVS----------------AGLGPLYDNPD-----QRPRL 332 Query: 362 RIMIGTYVLSSRCYDSHYL-RARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R + V R ++ + RA IR+ R T F + V+ ++ PT FPL + Sbjct: 333 RAEVIWEVERGRALEAVAIQRASAIRSAWFRKTTALFRE-VNALVMPTAQVWPFPL--DW 389 Query: 421 NNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 N+ + + D + + ++AGLPAI VPA +P+GLQL+G P+R Sbjct: 390 NHPVEIAGQHLDTYHRWMECVIPASIAGLPAIGVPAGFGAAGLPMGLQLVG-PYR 443 >gi|297744643|emb|CBI37905.3| unnamed protein product [Vitis vinifera] Length = 514 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 121/440 (27%), Positives = 189/440 (42%), Gaps = 61/440 (13%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 IG KD T T +L P ++ V KL GA++LGK ++ E+A N Sbjct: 111 IGTKDKLNT----TAGSFALLKSVVPR-DAGVVMKLRKAGAIILGKASLSEWA----NFR 161 Query: 136 SYYGPVISPWRSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 S P R + + TP GSS GS+ +VA L A S+GT+T GSI PASF Sbjct: 162 SLNAPPGWSARGGQGLNPYVLSATPCGSSSGSAISVAANLVAVSLGTETDGSILCPASFN 221 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN---- 247 VGIKPT G SR G++ +P D G I RTV D+ +L AI G+D DA Sbjct: 222 SVVGIKPTVGLTSRAGVVPVSPRQDTIGPICRTVLDAVQVLDAIVGFDYNDAEATREASK 281 Query: 248 -LPVPDYERALDQ-SIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIV-EIS 303 +P Y++ L ++G +GI + S + + ++ L+ GA +V ++ Sbjct: 282 YIPYGGYKQFLKPYGLKGKRLGIVRNPFFTTGSGAALTQAFEHHFYTLRQEGAVLVDDLE 341 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IGFGQEVKH 361 + + L A S EA++ LA + + L KD++ + + I F Q+ Sbjct: 342 IANINVILNA---TSSGEATALLAEF---KLSLNSYLKDLVASPVRSLADVIAFNQKFSD 395 Query: 362 RIMIGTY----VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-----GVDVILTPTTPTS 412 MI + L+++ + +K + + R + FE+ +D ++TP + Sbjct: 396 LEMIKEFGQDIFLAAQATNGIGDVEKKALSNLARLTRDGFEKLMIENKLDALVTPGS--- 452 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 DV V + + G P ISVPA K +P G+ G E Sbjct: 453 -------------------DVAPV-LAIGGFPGISVPAGYDYKGVPFGICFGGLKGSEPK 492 Query: 473 LFSVGQIIEKEAGYFRPHKW 492 L + E+ +P + Sbjct: 493 LIEIAYGFEQATKIRKPPSF 512 >gi|327295084|ref|XP_003232237.1| N-acylethanolamine amidohydrolase [Trichophyton rubrum CBS 118892] gi|326465409|gb|EGD90862.1| N-acylethanolamine amidohydrolase [Trichophyton rubrum CBS 118892] Length = 598 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 116/484 (23%), Positives = 212/484 (43%), Gaps = 46/484 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK----ARAAAEESD 60 ++ ++ R+ ++ ++ +V++ + I S + +Q RA+AE S Sbjct: 108 DYYTSADYRELYKTGKLTPTAVVEALLPVIRRDTSPPGEFSAGFSQSKIDLVRASAEAST 167 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R NG ++GIP+ IKD G S + P + S +K + GA+++ Sbjct: 168 QRWANGTPLGPMDGIPVAIKDEVDIDGYDKYLSSKVNFTANPSFTSWCVKKWEEAGAIVI 227 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N PV+ R+ + +T G S G A AG + A +G D Sbjct: 228 GKTVMHEIGLDTTNNN----PVVGTPRNPHNPGYYTGGSSGGSGYAVGAGVVPLA-LGAD 282 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A ++ G + ++ D A+ + ++ D Sbjct: 283 GGGSIRIPSNYCGIYGLKTTHGRVSAAPTCRLATTVGVFGPMASSIDDLAMGYRIMSAPD 342 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAK 298 + P P S +G +G+ K++ ++ +P + + + I + +D G + Sbjct: 343 PNNPVSAAFPDPLLSIPSPSSSRGKVIGVYKDW-VERSNPDVLAMFNKAIDYYRDEQGYQ 401 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV+I++P+ + + E SS L + + I ++ TR Sbjct: 402 IVDITIPYIPEGGKCHALSILNEISSGLTK------------EQISQLSAPTR------- 442 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVILTPTTPTSAFPL 416 I V ++ Y ++++R L+ + F++ G+ VI TPTTPT+ + Sbjct: 443 ------IVVSVGGTQGLAQDYFASQRMRHLLMNHLSFLFQKYPGI-VIATPTTPTAGSKI 495 Query: 417 GKEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFRE 470 E + S S + + + N G PAIS P E +P+GL +G+ E Sbjct: 496 SGGEADLTNGISDSNATLQSMEYVYLANFTGCPAISCPMGYDDEPSVPVGLMGMGEWGSE 555 Query: 471 ETLF 474 E L Sbjct: 556 EALM 559 >gi|168705517|ref|ZP_02737794.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Gemmata obscuriglobus UQM 2246] Length = 338 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 128/248 (51%), Gaps = 14/248 (5%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + ++++ +R+ +++ +L++ + I+ ++ A++ + AR A + Sbjct: 5 LTITDAAGFIRTGELTPADLLEQCLARIDRYEDRVRAWVHIDRDGAREQAARLTAELKQN 64 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + R L GIP+GIKD + T S ++T ++L GAV+LGK Sbjct: 65 NYRGPLHGIPVGIKDIIDVFDMPTGCGSKRWAQSYARRDATCVERLRQAGAVILGKTVTT 124 Query: 126 EFAMGSSNETSYYGPVI-SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 +A S+ PV +PW ++D T PGGSS GS+AAVA +C ++ T TGGSI Sbjct: 125 AYA-------SFDPPVTRNPW-NLDRT----PGGSSSGSAAAVACGMCLGALATQTGGSI 172 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 +PAS+ G +KPT+GR S G++ APSLD G++ V A + +AIAG D D Sbjct: 173 TRPASYCGVYSLKPTHGRVSVDGVLPLAPSLDHIGVMANCVNGLAWIFEAIAGRDPRDPA 232 Query: 245 CVNLPVPD 252 VPD Sbjct: 233 SAGERVPD 240 >gi|213404876|ref|XP_002173210.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Schizosaccharomyces japonicus yFS275] gi|212001257|gb|EEB06917.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Schizosaccharomyces japonicus yFS275] Length = 535 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 125/242 (51%), Gaps = 13/242 (5%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 ++ E + L + I+ V+L Y++ IE NS++ A+ EV + A + ++R NG Sbjct: 30 SIDELQHFLNTGAITTVQLTRKYLEKIEKLNSRVKAFAEVNPDAVKIAKQLDEERA-NGH 88 Query: 68 AR-DLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 R + IP+ +KD AT + T A S L G ++ V + L D GAV+LG M Sbjct: 89 VRGPMHSIPVVVKDNMATADANTTMAGSLSLAGSVVPRDAHVVKLLRDAGAVILGHAAMS 148 Query: 126 EFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGG----SSGGSSAAVAGFLCAASIGTDT 180 E+A M SS Y RS + + + GG SS GS+AAV + ++GT+T Sbjct: 149 EWADMRSSRFMEGYSA-----RSGQTLNPYCKGGCPGGSSSGSAAAVTCDMATIALGTET 203 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSI PA+ VGIKPT G SR G++ + LD G RT++D+ L AI G DE Sbjct: 204 DGSIVTPAALNFIVGIKPTVGLTSRAGVVPESEHLDSVGTFGRTMKDAVYALDAIVGVDE 263 Query: 241 CD 242 D Sbjct: 264 MD 265 >gi|170694143|ref|ZP_02885298.1| Amidase [Burkholderia graminis C4D1M] gi|170140883|gb|EDT09056.1| Amidase [Burkholderia graminis C4D1M] Length = 419 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 117/444 (26%), Positives = 191/444 (43%), Gaps = 53/444 (11%) Query: 54 AAAEESDKRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 +AA E+++R + G+ R L+G+P+ +KD A G+ T+ S R H ++ +L Sbjct: 2 SAAGEAERRWMRGEPRGPLDGVPVSVKDLVAVAGLPTRHGSRTASPEREHADAPAVARLR 61 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 GA+ GK EF + G +PW + + +PGGSSGGS+ AVA + Sbjct: 62 GAGAIPFGKTTTSEFGNKIVTDCPLTGATRNPWDT-----RLSPGGSSGGSAVAVALGMG 116 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 S+ TD GGSIR PA ++G VG KPT+ S+ +L G + R VRD+A++L Sbjct: 117 PLSLATDGGGSIRIPACWSGVVGFKPTFALVPAGAATSWT-ALSTLGPMARNVRDAALML 175 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 A+ +D + Y A+D + G+ + ++ I K ++ Sbjct: 176 DAMI-HDSVGGYPLTTAASGYASAVDDGVAGLRIAWCPAPDSVQVTQDIAKCVERAADTF 234 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 GA++++ + + +A Y YG G+ M+ S Sbjct: 235 GALGARVIQADV-------------------APIADY----YG---NGR----MHSVQWS 264 Query: 353 IGFGQEVKH-----RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDV 403 + F Q V+H R ++ + + + A + L+ R A F + D+ Sbjct: 265 VFFAQRVRHMEGTDRTLLDPDLKALADAGAQVDTATFVDALLARHALGASMDTFFERCDL 324 Query: 404 ILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQL 463 +LTPT F G + V T N AG+PAISVP +P+GLQ+ Sbjct: 325 LLTPT-----FHCGPPPVPGLPVHLRQAPVLTAWCNQAGVPAISVPCGF-AGDLPVGLQI 378 Query: 464 IGQPFREETLFSVGQIIEKEAGYF 487 IG+ + + + E G F Sbjct: 379 IGRRGSDALVLRAARAYELARGEF 402 >gi|289624889|ref|ZP_06457843.1| Amidase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869218|gb|EGH03927.1| Amidase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 597 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 16/211 (7%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIP GIKD FA +G+ ++ + G ++T +L GA+++G Sbjct: 116 GPAPPLCGIPFGIKDSFALQGLESKNGTQAFSGNLALRDATCVARLRAQGAIIIGHTICS 175 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E + + + + G P R TPGGSS GS A LCAA++G +T GSI Sbjct: 176 ELSTHTVGQ--FAGNAWDPTR--------TPGGSSQGSGVAPVARLCAAALGEETAGSII 225 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDAT 244 PA+ G IKP+ G S G++ D G + R++RD++++L IAG D E D Sbjct: 226 IPAAANGASAIKPSLGLVSGAGVMPLRSGWDVVGPMARSIRDASLILSIIAGPDGENDPQ 285 Query: 245 CVNLPVPDYERALDQS-----IQGMTVGIPK 270 ++ P + + + ++G+T+GIP+ Sbjct: 286 SLSAPSIGEQLCITPTPGSVPLEGLTIGIPQ 316 >gi|229121502|ref|ZP_04250729.1| Amidase [Bacillus cereus 95/8201] gi|228661966|gb|EEL17579.1| Amidase [Bacillus cereus 95/8201] Length = 536 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 133/275 (48%), Gaps = 33/275 (12%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DE------FAMGSS------NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLC 172 E F M S + YGP++ F GSS GS+ V Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPIM-----------FDTSGSSSGSATVVTADFA 240 Query: 173 AASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILL 232 ++GT+T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L Sbjct: 241 PLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLF 300 Query: 233 KAIAGYDECDATCVNLPVPDYER---ALDQSIQGM 264 A+ GYDE D + V D ER D SI G+ Sbjct: 301 NAMIGYDEKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|46127401|ref|XP_388254.1| hypothetical protein FG08078.1 [Gibberella zeae PH-1] Length = 546 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 117/530 (22%), Positives = 214/530 (40%), Gaps = 107/530 (20%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI-INGDAR 69 E R+ S++++AV+ ++++ ++ +N ++ + AEE DK G + Sbjct: 59 EVVKRIESRELTAVQALEAFGARTAIAHQLVNCLMDWFYEDGLRQAEELDKSFKATGKLK 118 Query: 70 -DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 L G+P+ +KD G T FRP ++S + + L D GAV K M + Sbjct: 119 GPLHGVPVALKDFHFVAGRPTTTGYVSRRDFRPEHDSALVKTLRDAGAVFYCKTTMPQSG 178 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 M ++ +G ++P+ + + GGSSGG + VA + TD GGSIR PA Sbjct: 179 MAIETVSNLWGRTLNPYNTA-----LSAGGSSGGDAVLVALKGTPITPSTDLGGSIRVPA 233 Query: 189 SFTGTVGIKPTYGRCSRLGI-------ISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 +F G I+PT R + G+ IS S G I ++ D K I Y E Sbjct: 234 AFNGLYAIRPTSDRIPKGGMDNINSGQISIKLS---CGPICHSMEDLESFTKLINAYPEN 290 Query: 242 DATCVNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 ++PVP + I+G +T+G+ K ++ P + + + L+ AG ++V Sbjct: 291 QNDPTSVPVP---WKTVKPIEGKLTIGLMKWDKVVMPHPPVIRALEHTKRTLEKAGHEVV 347 Query: 301 EISLPH-----TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 E +P Q YY + + G L G+ ++ +E+ + Sbjct: 348 EFDVPFDCWDAIQTTFDTYY----------QSGHSGTLSTLEATGEPLIPAFEDLIKV-- 395 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---------QGVDVILT 406 G+ +S+ ++AR + + F +A++ + VD ++ Sbjct: 396 ---------FGSKEISAAESQQLNVKAR----IFREKFRDAWDATTKLTSTGRPVDALIC 442 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDV--FTVAVNMAGLPAISVPAA------------- 451 PT P +P H +N +T N+ P++ +P A Sbjct: 443 PTAPAVGYP------------HDFNVYWGYTSLFNLLDYPSVILPVANFKVNPQDDPVAS 490 Query: 452 ----------------LCEKKM----PLGLQLIGQPFREETLFSVGQIIE 481 L + ++ P +Q++G+PF++E L V +++ Sbjct: 491 NYKPLETNPYDKPNHELYKPELFSSQPSTIQVVGRPFQDEELIKVSSVMD 540 >gi|171680644|ref|XP_001905267.1| hypothetical protein [Podospora anserina S mat+] gi|170939949|emb|CAP65175.1| unnamed protein product [Podospora anserina S mat+] Length = 746 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 115/437 (26%), Positives = 189/437 (43%), Gaps = 63/437 (14%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP +KD G+ T A C + P +T +++ D GA+ +GK+N+D+ A Sbjct: 340 LYGIPFSVKDTIDVAGVPTTAACPSY--AYTPQVSATAVRRVLDAGALFIGKVNLDQLAT 397 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S S YG S + +DK PGGSS GS +V L + + TDT GS R PA+ Sbjct: 398 GLSGCRSPYGTPHSVF-----SDKHIPGGSSSGSCVSVGERLVSFGLATDTAGSGRVPAA 452 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KPT G S G++ +LD ++ ++ ++ + + IA +D D LP Sbjct: 453 FNGIVGFKPTKGTVSARGLVPACRTLDTITVVAPSITEARKVWQVIAHHDPEDPYS-KLP 511 Query: 250 --VP----DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS 303 +P DY + G T +P L + + +S L+ G + E+ Sbjct: 512 HTLPTWHIDYR---GPRVGGFTFAVPPPTILKVCKKEYRELFSSAVSALQSCGGTLKEVE 568 Query: 304 LPHTQYALPAYYIISPAEASSNLARYDGVRY-------GLRVEGKDILEMYENTRSIGFG 356 +P A+ +L YDG G R ++ +M+ R + F Sbjct: 569 Y-------------TPFSAAGDLL-YDGSLLHERIHCIGHRFLQSNLPDMHPVIREL-FD 613 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---QGVDVILTPTTPTSA 413 + + + ++ YD+ R + ++ + R+ F+ GVDV++ PT T+ Sbjct: 614 KAMSNPPLV---------YDA--FRDQALQARLTREVQGVFDVLNGGVDVLVVPT--TTQ 660 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC-------EKKMPLGLQLIGQ 466 P KE + FT N+ L +SVPA E+KMP G+ ++ Sbjct: 661 HPTIKEMEADPLKLNSELGTFTHCANVVDLCGVSVPAGTWLWGQEGDERKMPFGITILSG 720 Query: 467 PFREETLFSVGQIIEKE 483 + + + + E+E Sbjct: 721 SGYDAKVLDIAGVFEEE 737 >gi|150398602|ref|YP_001329069.1| hypothetical protein Smed_3413 [Sinorhizobium medicae WSM419] gi|150030117|gb|ABR62234.1| Amidase [Sinorhizobium medicae WSM419] Length = 453 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 143/293 (48%), Gaps = 19/293 (6%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EG 73 R++S + + LV+ + I S+ + ++ + ++A A+ + +R+ G + L +G Sbjct: 13 RVQSGQLDPITLVEETLTEI-GSHPDKSIFVALTRERATREAQAASERMRAGRSLGLLDG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDG-FRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ KD F G T A S +L+ R ++ V KL G V +G+ N+ EFA Sbjct: 72 LPVAWKDLFDLAGSVTTAGSAVLENRSRAVTDAAVVAKLASAGMVSIGRTNLSEFAFSGL 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 +YG +P RS D+ PGGSS GS+AAVA L +IGTDTGGS+R PA+ G Sbjct: 132 GINPHYGTPRNP-RSTDA--HRIPGGSSSGSAAAVAAGLVPLAIGTDTGGSVRIPAAMNG 188 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG K T GR + G+ A SLD G + RTV+D+ DA L P Sbjct: 189 IVGYKATRGRYAMRGVFPLARSLDSLGPLCRTVQDAVW----------ADAAMHGLTAPV 238 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 RA + +++ I D P I ++ I L+ AG KI + P Sbjct: 239 IRRA---ELADLSIVIADTIVFDDAEPEIVTAFEGAIKRLEAAGVKIRRQAFP 288 >gi|332285564|ref|YP_004417475.1| amidase [Pusillimonas sp. T7-7] gi|330429517|gb|AEC20851.1| amidase [Pusillimonas sp. T7-7] Length = 451 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 112/407 (27%), Positives = 182/407 (44%), Gaps = 54/407 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ IK CF +G T A S L G P +S + +L + A++L + NM EFA Sbjct: 57 LAGLSCTIKACFDVEGWTTHAGSVALLGAPPAQQDSALVSRLRQSDALILAQTNMTEFAY 116 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+ +Y+G +P + + GGSS G++ +VA ++ +DT GS+R PA+ Sbjct: 117 GALGLNTYFG---TPRTPLCVDGEHVAGGSSSGAAVSVALGFVDFALCSDTSGSVRIPAA 173 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG+ P+ GR G++ +PS D GII ++V + + + CD V+ Sbjct: 174 FCGAVGMMPSAGRFDTRGMLGLSPSFDVPGIIAKSVSVCTRVYETL-----CDKPAVHAT 228 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV--EISLPHT 307 + A D + +++ +P+ + P + + + + + L+ G +V +IS Sbjct: 229 AME-SAATDPRL--VSLCVPESVFGADVEPGVLELFHRAVDLLRAQGVTVVRRDISSISG 285 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 A+ A I A+A Y L +D+L Y + + V+ RI G Sbjct: 286 VGAIAADGGIIAADA-----------YALH---RDLLARYGDD----YDPLVRRRIEAGA 327 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFE---QGVDVILTPTTPTSAFP-----LGKE 419 + + ++ R L++R + FE QG D +LTPT+P FP L E Sbjct: 328 LAPAWKYGEAQ-------RALVER--SAQFETELQGFDAVLTPTSPI--FPPRLSDLRDE 376 Query: 420 ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E + FT N G P+IS+P K P L L G+ Sbjct: 377 ERYLALNKKSF--AFTELANRLGKPSISMPLGSVSSK-PTALLLTGK 420 >gi|229552916|ref|ZP_04441641.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus rhamnosus LMS2-1] gi|258540473|ref|YP_003174972.1| amidase [Lactobacillus rhamnosus Lc 705] gi|229313724|gb|EEN79697.1| possible 6-aminohexanoate-cyclic-dimer hydrolase [Lactobacillus rhamnosus LMS2-1] gi|257152149|emb|CAR91121.1| Amidase [Lactobacillus rhamnosus Lc 705] Length = 483 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 123/508 (24%), Positives = 209/508 (41%), Gaps = 96/508 (18%) Query: 21 ISAVELVDSYIQAIENSNSQMNA--YIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 +++ +L+D + + N Q+NA + A K AAA + + G+P+ + Sbjct: 17 VTSGDLIDMTAKKLTTRNPQLNAVTWTRFDAAKHEAAA-------LTDTGQPFFGVPLFL 69 Query: 79 KDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 K + G S + + + Q L G +++G+ N+ EF + + + Sbjct: 70 KGLGQSLAGAPETGGSRLFKDAKATRTNNFVQALQRLGFIIVGQSNVPEFGFKNITDAAL 129 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YGP +PW ++PGGSSGG++A VA + + G+D GGSIR PASF+G +G+K Sbjct: 130 YGPARNPWNL-----AYSPGGSSGGAAALVAAGISPLAAGSDGGGSIRIPASFSGLIGLK 184 Query: 198 PTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 PT GR + I+FA +TRT+ D+ LL+ +A + A + Sbjct: 185 PTRGRVPTGPGEWRGWQGASINFA--------LTRTMADTEALLRGLA-TTQLAAPFIAP 235 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDAGAKI 299 P+ LDQ V + R+ Y +S T ++ + L+ AG + Sbjct: 236 PL-----RLDQ------VNDTRPLRIAYTTQSPVGTPVSSTAITAVEKAVDALRAAGHTV 284 Query: 300 VEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 E + AL AYY+++ E ++ Y + G V DI Sbjct: 285 TEAAPDVDGVALMQAYYLMNGGETAAMFQAYTD-QTGRTVTPNDI--------------- 328 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 I Y + Y R+ I ++ F + D++LTPTT +A + Sbjct: 329 --ELITWAIYQAGLHTTAADYSRSLAIWDRAAEAYSR-FHESYDLLLTPTTAKTAPRIDA 385 Query: 419 EENNSGSMGHIYNDV-----------------------FTVAVNMAGLPAISVPAALCEK 455 + + +++ FT N+ G PAIS+P A+ ++ Sbjct: 386 ALQSPAIIKKMHHAAELDPSEQQTLIWDLFEPSLTYSPFTQQANLTGAPAISLPTAISDE 445 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKE 483 +PLG+Q RE+ L +G E+ Sbjct: 446 GLPLGIQFTAAKGREDQLLRIGYWFEQH 473 >gi|330914823|ref|XP_003296800.1| hypothetical protein PTT_06986 [Pyrenophora teres f. teres 0-1] gi|311330901|gb|EFQ95103.1| hypothetical protein PTT_06986 [Pyrenophora teres f. teres 0-1] Length = 547 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 167/335 (49%), Gaps = 29/335 (8%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGI 74 L + D ++ +LV +Y++ I N ++ +E+ A A++ D+ +G R L G+ Sbjct: 43 LHAGDFTSADLVTAYVERIMEVNKTLHMVVEI-NPDALLIAKKLDEERASGKVRGPLHGL 101 Query: 75 PIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 PI +K+ AT ++ A S L G + ++TV KL + GA++LGK N+ ++A S+ Sbjct: 102 PILVKNNIATADKMNNTAGSWSLIGAKVPRDATVVAKLREAGAIILGKSNLSQWANFRSS 161 Query: 134 ETSYYGPVISPWRSM--DSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 +S + W + + + PG GSS GS + + L ++GT+T GS+ P Sbjct: 162 NSS------NGWSAHGGQTYGAYYPGQDPSGSSSGSGVSASLGLAWGTLGTETDGSVISP 215 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 + VGIK T G SR +I + D G + RTV+D+A +L+AI+G D D Sbjct: 216 SEVNNIVGIKVTVGLTSRALVIPISEHQDTVGAMARTVKDAAYILQAISGPDSYDNYTSA 275 Query: 248 LP------VPDYERALD-QSIQGMTVGIPKEY--RLDYLSPTIDKTWQQGISWLKDAGAK 298 +P P+Y A +++G +G+P+ Y D + I ++ + ++ AGA Sbjct: 276 IPWAKSGKKPNYIAACKLDALKGKRIGVPRNYIGSPDETTTAIYAAFESALDTIRSAGAT 335 Query: 299 IVEISLPHTQY----ALPAYYIISPAEASSNLARY 329 IVE + +T Y A I+ + S NLA Y Sbjct: 336 IVE-NTNYTAYDEWRQSNAETIVLDGDFSPNLAHY 369 >gi|289650734|ref|ZP_06482077.1| Amidase [Pseudomonas syringae pv. aesculi str. 2250] Length = 597 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 16/211 (7%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIP GIKD FA +G+ ++ + G ++T +L GA+++G Sbjct: 116 GPAPPLCGIPFGIKDSFALQGLESKNGTQAFSGNLALRDATCVARLRAQGAIIIGHTICS 175 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E + + + + G P R TPGGSS GS A LCAA++G +T GSI Sbjct: 176 ELSTHTVGQ--FAGNAWDPTR--------TPGGSSQGSGVAPVARLCAAALGEETAGSII 225 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDAT 244 PA+ G IKP+ G S G++ D G + R++RD++++L IAG D E D Sbjct: 226 IPAAANGASAIKPSLGLVSGAGVMPLRSGWDVVGPMARSIRDASLILSIIAGPDGENDPQ 285 Query: 245 CVNLPVPDYERALDQS-----IQGMTVGIPK 270 ++ P + + + ++G+T+GIP+ Sbjct: 286 SLSAPSIGEQLCITPTPGSVPLEGLTIGIPQ 316 >gi|315145239|gb|EFT89255.1| amidase [Enterococcus faecalis TX2141] gi|315161938|gb|EFU05955.1| amidase [Enterococcus faecalis TX0645] Length = 528 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 118/444 (26%), Positives = 199/444 (44%), Gaps = 66/444 (14%) Query: 41 MNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFR 100 MN+ E+ Q A A+ D++ + L GIP+ +K+ T + + A ++ L F+ Sbjct: 108 MNSISEINPQ-AIKEAKAFDQQASQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFK 166 Query: 101 PHYESTVTQKLWDNGAVMLGKLNMDEFA-----MGSSNETSYYGPVISPWRSMDSTDKFT 155 P ++ V +KL + ++LGK+N+ E A S +S +G ++P+ + K T Sbjct: 167 PKEDAEVVKKLTEAQTLILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPL----KIT 222 Query: 156 PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL 215 P GSS GS+A+V + A S+GT+T GSI PAS VG KPT+ S G++ APSL Sbjct: 223 PSGSSSGSAASVTMNIGAFSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSL 282 Query: 216 DQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD 275 D G I R+V D A GY+ V P D + ++QG +G+ + Sbjct: 283 DTVGPIARSVVDVA------QGYNAFKKDTV--PSIDSTKFTKNNLQGQRIGLLE----- 329 Query: 276 YLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYD----G 331 P+ ++ + ++ AGA+++ ++ P I + SN ++ Sbjct: 330 --MPSAEEEFATAKKAIQKAGAEVIPLT--------PDMEGIDGGKVISNEFKFALEEFA 379 Query: 332 VRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKR 391 RY L + + L Y Q+ K R G +L + + I+T IK+ Sbjct: 380 KRYDLPFKTLEELIAYNQ-------QDKKVRAKYGQDLLEADVKKKQPDK-EIIQTTIKK 431 Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPA 450 +Q D +L K++ + G+ + D ++ +AG P ++VP Sbjct: 432 A-----QQTFDALLK-----------KQQLD----GYAFIDSEGTGLSAVAGYPELTVPL 471 Query: 451 ALCEKKMPLGLQLIGQPFREETLF 474 A + P GL +E+TLF Sbjct: 472 AKNSEGQPYGLTFTQTANKEQTLF 495 >gi|307944957|ref|ZP_07660294.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp. TrichSKD4] gi|307771881|gb|EFO31105.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp. TrichSKD4] Length = 489 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 126/504 (25%), Positives = 222/504 (44%), Gaps = 56/504 (11%) Query: 7 MAVSESRDRLR---SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKR 62 + + ++ D LR K+IS E++++ + ++ N +NA + + + AAA+ +D Sbjct: 23 LTLLDAVDLLRLMVRKEISCAEVMEAVLARVDAVNPAINAIVSMPDRDTLMAAAKAADNT 82 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 G R G+P +KD KG+ + S I P + + ++L GA+ +GK Sbjct: 83 PRTGPLR---GLPFVVKDLVEVKGLRSTHGSPIFADHVPAQDDLLAERLRAAGAIFIGKT 139 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N EF MGS + +G +P+ D T T GGSSGG++AA+A L + G+D G Sbjct: 140 NTPEFGMGSQSYNPVHGVTRNPY---DITK--TAGGSSGGAAAALAARLVPLADGSDMMG 194 Query: 183 SIRQPASFTGTVGIKPTYGRCS-RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 S+R PA+F G +PT+G SF L G + R+V D A L+ IAG D Sbjct: 195 SLRNPAAFCNVYGFRPTFGLVPGDPRKESFFNQLATDGPMARSVEDLAFLMDVIAGPDP- 253 Query: 242 DATCVNLP-----VPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDA 295 LP VP + LD ++G+ +G ++ Y + + + + D Sbjct: 254 -----RLPHSHAEVPKFTGLLDGDVKGLKIGWIGDWNGHYAMEAGVLDQCEGAFAAFADL 308 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G ++ + +P++ +P + ++ + +R G L +TR+ Sbjct: 309 GVEV--------EPFVPSF---APEKIWNS---WLTLRSFAIAGGLKALYDKPSTRA-KL 353 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 E I G + S +++ +R+ R L + AFE+ DV+ P+ FP Sbjct: 354 KPEAIWEIECGLALSSMEVFEASTVRSSWYRQLAR-----AFER-FDVLALPS--AQVFP 405 Query: 416 LGKEENNSGSMG-------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 + + + H + +V + ++ G+PA++VP +P+GLQLIG Sbjct: 406 FDADTHWPSEIAGRPMATYHQWMEV-VIPASLVGVPALNVPVGFTASGLPMGLQLIGPKG 464 Query: 469 REETLFSVGQIIEKEAGYFRPHKW 492 + L +G + + W Sbjct: 465 ADLKLLRLGHAYHQATNWVENVPW 488 >gi|301603581|ref|XP_002931490.1| PREDICTED: fatty-acid amide hydrolase 1-like [Xenopus (Silurana) tropicalis] Length = 586 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 145/313 (46%), Gaps = 22/313 (7%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 + +S+ D+L+ ++A + +Y + N ++N + +++ A +E K+ G Sbjct: 81 LTLSQLVDQLKKGSLTAESALIAYTEKALEVNKELNCLTDFLSE-CEAQLQEVKKQKEKG 139 Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G+PI +KD KG H C + G +S + Q L GAV K N+ Sbjct: 140 L---LYGVPITLKDNVGYKG-HDSHCGLVQFLGIVDQEDSVIVQVLKKQGAVPFVKTNIP 195 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 + + S +G ++P K T GGSSGG +A +AG +GTD GSIR Sbjct: 196 QSMINFDCSNSIFGQTLNP-----HNHKKTCGGSSGGEAALIAGGGAVLGVGTDVLGSIR 250 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA----GIITRTVRDSAILLKAIAGYDEC 241 P SF G G+KP+ R S LG + + A G + R V A+ +KA+ D Sbjct: 251 MPCSFCGICGLKPSGNRLSSLGFSTPVSGMKSAVMMPGPMARDVDSLALFMKAVLCDDMF 310 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLD-YLSPT--IDKTWQQGISWLKDAGAK 298 PVP + + S + +T+G Y D Y PT + + Q+ + L++AG K Sbjct: 311 QLDPTVPPVP-FRDEIYNSSKPLTIGF---YDTDGYFLPTPGMKRAIQETKALLEEAGHK 366 Query: 299 IVEISLPHTQYAL 311 +V S P +YAL Sbjct: 367 LVPFSPPRIEYAL 379 >gi|298489251|ref|ZP_07007268.1| Aspartyl-tRNA(Asn) amidotransferase subunit A; Glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156215|gb|EFH97318.1| Aspartyl-tRNA(Asn) amidotransferase subunit A; Glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 597 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 16/211 (7%) Query: 66 GDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 G A L GIP GIKD FA +G+ ++ + G ++T +L GA+++G Sbjct: 116 GPAPPLCGIPFGIKDSFALQGLESKNGTQAFSGNLALRDATCVARLRAQGAIIIGHTICS 175 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E + + + + G P R TPGGSS GS A LCAA++G +T GSI Sbjct: 176 ELSTHTVGQ--FAGNAWDPTR--------TPGGSSQGSGVAPVARLCAAALGEETAGSII 225 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDAT 244 PA+ G IKP+ G S G++ D G + R++RD++++L IAG D E D Sbjct: 226 IPAAANGASAIKPSLGLVSGAGVMPLRSGWDVVGPMARSIRDASLILSIIAGPDGENDPQ 285 Query: 245 CVNLPVPDYERALDQS-----IQGMTVGIPK 270 ++ P + + + ++G+T+GIP+ Sbjct: 286 SLSAPSIGEQLCITPTPGSVPLEGLTIGIPQ 316 >gi|261342056|ref|ZP_05969914.1| amidase [Enterobacter cancerogenus ATCC 35316] gi|288315712|gb|EFC54650.1| amidase [Enterobacter cancerogenus ATCC 35316] Length = 446 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 111/425 (26%), Positives = 185/425 (43%), Gaps = 54/425 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ I+D A + L R + V Q+L GA++L + NM EFA Sbjct: 59 LHGVPLIIEDNIACAPLPITLGCRALASLRATSVARVIQRLRRAGAIILARANMSEFAFD 118 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + +S G V +P T GGSSGG +AAVA + ++GTDTGGSIR P S+ Sbjct: 119 VRSRSSLGGDVANPL-----LPSVTAGGSSGGCAAAVAAGMADGALGTDTGGSIRIPCSY 173 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 TG VG++P Y R G+ +PS D G + +V D+A+L I G P+ Sbjct: 174 TGLVGLRPAYRRAQLDGVAPLSPSKDTVGPMVHSVEDAAMLHAIIHGLP---------PI 224 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTID---KTWQQGISWLKDAGAKIVEISLPHT 307 P R S++G+ G+ + L + D W + L AGA +VEI+LP Sbjct: 225 PLPPR----SLKGVRFGV-----ITALQGSDDVQLAVWNPALHALSRAGATLVEIALPFM 275 Query: 308 QYALPAYYIISPAEASSNLARYD-GVRYGLRVEGKDILEMYENTRSIGFGQEVKH--RIM 364 A + +L+ + + + L + + + S F E R M Sbjct: 276 DEVRQATCL--------SLSEFRVAIDHWLTKQPDAPAGLKQIVDSGAFLPEFAPFLRQM 327 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSAFPLGKEENNS 423 + L + +L R+ + ++++ E+ +D + PT + Sbjct: 328 LTYNTLKT----PLWLAGRRFQRQLRQNLCHVAEELRLDGFVYPTV----------QQLP 373 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 SM + ++GLPAI++P + +P+G++++ E L ++ + E+ Sbjct: 374 DSMAKMPPGCAPELSAISGLPAITLPCGVSRSGLPVGMEILSVQAEETGLLALARGCEEV 433 Query: 484 AGYFR 488 +FR Sbjct: 434 --FFR 436 >gi|326514106|dbj|BAJ92203.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 393 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 23/295 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 +++ LV Y+ I N ++A IEV R A +R +G A L G+P+ +K Sbjct: 45 LTSRALVRFYLDQIGRLNPLLHAVIEVNPDALRQAKRADAERRSSGHATGSLHGVPVLLK 104 Query: 80 DCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D AT+ ++T A S L G ++ V +L GAV+LGK ++ E+A + Sbjct: 105 DNIATRDALNTTAGSLALLGSVVRRDAGVVARLRRAGAVVLGKASLSEWA--------NF 156 Query: 139 GPVISPW--RSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 V + W R + + + TP GSS GS A A + A ++GT+T GSI P+SF Sbjct: 157 RQVDAGWSARGGQARNPYVLSSTPCGSSAGSGVAAAANMAAVTLGTETDGSILCPSSFNS 216 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN----- 247 VGIKPT G SR G+I P D G + RTV D+ +L AI GYDE DA Sbjct: 217 VVGIKPTLGLTSRAGVIPITPLQDTVGPMCRTVSDAVHVLDAIVGYDEHDAAATGAASKY 276 Query: 248 LPVPDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +P Y + ++G +G+P + Y ++ ++Q ++ ++ GA +VE Sbjct: 277 IPRGGYTQFLKKDGLKGKKIGVPNGFFQGYGQAQLN-VYKQHLATMRKLGAVVVE 330 >gi|73537906|ref|YP_298273.1| amidase [Ralstonia eutropha JMP134] gi|72121243|gb|AAZ63429.1| Amidase [Ralstonia eutropha JMP134] Length = 556 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 134/507 (26%), Positives = 213/507 (42%), Gaps = 55/507 (10%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYI-----EVVAQKARAAAEESD 60 M + +R +S +++++Y+ I+ N NA + + + Q+A AA E Sbjct: 76 LMPAWQLSREIRGGRLSCRQVMNAYLAHIDRVNPVTNAIVALRDRDALMQEAAAADEAFA 135 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G + G+P KD T+GI T S I P ++ + +++ +GA++LG Sbjct: 136 ARKVAGW---MHGVPQAPKDLALTRGIRTTFGSPIFKDNVPTSDAIIVERVRKSGAILLG 192 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF +GS YGP +P+ DST T GGSSGG++AA+A L + G+D Sbjct: 193 KTNTPEFGLGSQTFNPVYGPTRNPY---DSTR--TAGGSSGGAAAALAMRLLPVADGSDF 247 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA F G +P+ GR F L G + RTV D A+LL AG D Sbjct: 248 GGSLRNPAGFCNVYGFRPSAGRVPYGPTPEVFIQQLGYEGPMGRTVADVALLLATQAGPD 307 Query: 240 E-------CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ---QGI 289 D L + AL +++G V ++ D P D Q Q + Sbjct: 308 PRTPQALAPDPVLATLTPDNVMAALSTNLKGKRVAWLGDW--DGYLPMEDGILQLCEQAL 365 Query: 290 SWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 G + +I P + L +++ + +G+ R E K L E Sbjct: 366 QAFPAFGVGVDKIKPPFSPERLWKTWLV-----HRHFLVGNGMLPFYRDEAKRALLKPEA 420 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 I ++ G + ++ S + +A E D I PT Sbjct: 421 IWEIEGALKLS-----GADIYAASADRSAWYQA-----------VEGVFAKFDYIAVPTA 464 Query: 410 PTSAF----PLGKEENNSGSMGHIYNDVFTVAV--NMAGLPAISVPAALCEKKMPLGLQL 463 F P KE +G Y+ V ++G PAISVP + +P+G+QL Sbjct: 465 QVFPFDVRQPWPKE--IAGRQMDTYHRWMEVVFPWTLSGCPAISVPVGFGKNGLPMGMQL 522 Query: 464 IGQPFREETLFSVGQIIEKEAGYFRPH 490 IG+P + ++ + + E+E + H Sbjct: 523 IGRPRDDLSVLRLARAYEQERDWVGRH 549 >gi|46126469|ref|XP_387788.1| hypothetical protein FG07612.1 [Gibberella zeae PH-1] Length = 556 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/527 (23%), Positives = 214/527 (40%), Gaps = 84/527 (15%) Query: 10 SESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD-- 67 SE ++ S+++++ E+V ++ + + E+ ++ A + DK++ Sbjct: 68 SELLGKIHSQELTSEEVVVAFSKRASLAQQLTACLTEIFFEEGIERARQLDKQLKETGKL 127 Query: 68 ARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L G+PI +KD F KG H T L P S + L D GAV+ K N+ + Sbjct: 128 AGPLHGLPISLKDSFVVKGHHATVGYIEFLRQPIPDTNSALVDLLLDAGAVLYCKTNLPQ 187 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + +E + +G ++P R+ T GGS+GG + + +G+D GSIR Sbjct: 188 TMMTADSENNIFGRALNPHRTT-----LTAGGSTGGEGSLIGFRGSPLGVGSDIAGSIRI 242 Query: 187 PASFTGTVGIKPTYGRCS----------RLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 P+ G G KPT R RL + AP AG + +V D + +K Sbjct: 243 PSLCCGIYGFKPTSERVPFDGQSEYPFRRLHMPGVAPV---AGPMASSVEDLELFMKITL 299 Query: 237 GYD--ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 G D + ++P D A ++ +T+G+ E LSP + ++ + S L+ Sbjct: 300 GQRPWNYDPSVADIPWRDVSGATEKK---LTIGVMAEDPDYPLSPPVKRSLAKAASALEI 356 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AG K+V+I PA SP + AR + + D + + Sbjct: 357 AGHKVVQI---------PA----SPKRNAGQGARIGFQYFTMVGPDPDTISRECGEPLVA 403 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL--IKRDFTEAFEQ-----GVDVILTP 407 + H G + + A K+ +L +K ++T+A+++ G+DV+L P Sbjct: 404 SVARLVHPFFNGEFPVRPDLE-----IADKLFSLNEVKMEYTKAWQEVWRDNGLDVVLAP 458 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK------------ 455 ++A P + G N V+T+ N+ PA VP K Sbjct: 459 GASSTAVP----HDTYG------NPVYTLMWNVLDFPAGIVPFGTSSKLADAEAIKATTP 508 Query: 456 -----------KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 P +Q++ FR+E QII+++ + HK Sbjct: 509 FEPDYIPEETDGAPCAIQIVAPRFRDEECLQAMQIIDRDIRLSQAHK 555 >gi|258577697|ref|XP_002543030.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237903296|gb|EEP77697.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 584 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 149/312 (47%), Gaps = 29/312 (9%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK-------ARAAAEESDK 61 + E + +L S +++V+LV+ Y + I Q N Y+ V+Q ARA E + Sbjct: 63 IDELQAQLTSGRLTSVDLVECYTERI----FQTNGYVNAVSQTNPDALKIARALDVERAR 118 Query: 62 RIINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G L GIP +KD AT+ + T A S L G ++ V KL GA++LG Sbjct: 119 GRVRGP---LHGIPFLVKDNIATRDRLETTAGSWALQGSVVPRDAHVAYKLRKAGALLLG 175 Query: 121 KLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFT--PGGSSGGSSAAVAGFLCAASIG 177 K M E+A M +++ + Y RS FT PGGSS GS AV+ A ++G Sbjct: 176 KAAMSEWAEMRTTDYSQGYSAFAGQSRS---AYNFTVNPGGSSSGSGIAVSINQAAFALG 232 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 T+T GS+ QPA VGIKPT G SR G+I + D G + +TVRD+ +L AI G Sbjct: 233 TETDGSVVQPAERNAIVGIKPTVGLTSRAGVIPISSHQDSVGTLGKTVRDATYVLDAIYG 292 Query: 238 YDECDA-TCVNL-PVPDYERALDQ------SIQGMTVGIPKEYRLDYLSPTIDKTWQQGI 289 D+ D T V P R Q +++G GIP P+ + + Sbjct: 293 IDKRDNYTFVQRGKTPRGRRGYSQFLTDKTALKGAVFGIPWNSYWKLGEPSQISQLLELV 352 Query: 290 SWLKDAGAKIVE 301 +K AGA IV Sbjct: 353 DLIKSAGATIVN 364 >gi|213971106|ref|ZP_03399225.1| amidase family protein [Pseudomonas syringae pv. tomato T1] gi|213924095|gb|EEB57671.1| amidase family protein [Pseudomonas syringae pv. tomato T1] Length = 442 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+P+ KD F G T A + + + P ++ L G V LGK N+ EFA Sbjct: 59 DGVPVAWKDLFDVAGCVTTAGATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEFAYS 118 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P M PGGSS GS+ AVA + ++GTDT GSIR PA+F Sbjct: 119 GLGLNPHFGTPINP---MSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 176 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 216 >gi|325121682|gb|ADY81205.1| amidase [Acinetobacter calcoaceticus PHEA-2] Length = 602 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 127/494 (25%), Positives = 205/494 (41%), Gaps = 74/494 (14%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEE--SDKR 62 N + + + ++ I +L+ Y+ I+N + NA+IE+ + + + + D+ Sbjct: 4 NLWTIQDWKTAYQNGQIHLADLI-GYVAEIKNDD---NAWIEIASNEQIQSQIDVLKDQN 59 Query: 63 IINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I + L G+P +KD G HT A C I + + ++ V KL GA+++GK Sbjct: 60 IAD---LPLYGVPFAVKDNIDVAGFHTTAACREI--QYLANQDAAVIAKLKKAGAIVIGK 114 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+D+FA G S YG V + + ++ GGSS GSS VA + S+GTDT Sbjct: 115 TNLDQFATGLVGVRSPYGAVKNSFNP-----EYISGGSSSGSSVVVANGIVPFSLGTDTA 169 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GS R PA VG+KPT G S G+I ++D I + D+ + + GYDE Sbjct: 170 GSGRVPAGHNNIVGLKPTKGWFSTTGLIPACRTIDVISIFALHIDDAWTIANLMQGYDET 229 Query: 242 D----ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 D A N+P +R + IP + Y +K + I +K G Sbjct: 230 DEYSRAHPANVPTQFSKR---------KIAIPAQLEF-YGDLESEKAFLVAIERVKKLGY 279 Query: 298 KIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++ I + A Y AE + + R TR Sbjct: 280 EVESIDFSAFNELAAALYNDAWVAERTVAVERM-------------------TTR----- 315 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT----- 411 E H ++ + + + L+A R ++ R A Q D ++ PT PT Sbjct: 316 -EKAHPVIAQIIAQADKFKATDALQAEYNRAVLARKINSAL-QPFDALMVPTAPTIYTIA 373 Query: 412 --SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 A PL K + MG +T VN A L A+++P L +P G+ I + Sbjct: 374 EVEADPLTK----NAHMG-----AYTNFVNFADLSALALPNVLRADSLPSGVTFIAPAWH 424 Query: 470 EETLFSVGQIIEKE 483 ++ L + Q+ + E Sbjct: 425 DQALANFAQLWQAE 438 >gi|319791538|ref|YP_004153178.1| amidase [Variovorax paradoxus EPS] gi|315594001|gb|ADU35067.1| Amidase [Variovorax paradoxus EPS] Length = 480 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 121/498 (24%), Positives = 225/498 (45%), Gaps = 45/498 (9%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVV-AQKARAAAEESDK 61 +L ++ +E R+ ++++S EL+ + + IE N + NA + + ++ A A E D Sbjct: 5 DLLALSATELSRRIAAREVSCQELMQASLGRIEALNPRFNAIVSLREPEQLLAEAGERDA 64 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+ R + G P+ +KD G+ T S + +S ++ GA+++G Sbjct: 65 ELARGERRGWMHGFPLAVKDLSHAAGLPTSMGSPLSPRSPARTDSLHVARMRAAGAIVIG 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N EF +GS + +G R+ + ++ GGSSGG++ A+A + + G+D Sbjct: 125 KTNTPEFGLGSHTYNTVFGIT----RNAYAPERSA-GGSSGGAAVALALRMLPVADGSDM 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIIS---FAPSLDQAGIITRTVRDSAILLKAIAG 237 GS+R PA+F +G++P+ GR G F L G + RTV D+A LL +G Sbjct: 180 MGSLRNPAAFNNVIGMRPSRGRVP--GDPEQELFFQQLGCEGPMARTVEDTARLLAVQSG 237 Query: 238 YDE--CDATCVNLPVPDYERALDQSIQGMTVG-IPKEYRLDYLSPTIDKTWQQGISWLKD 294 +D ++ LP PD E +LD +G+ +G + + L+P I + ++ + + Sbjct: 238 FDGRVPLSSPHALPSPD-ELSLDGDGKGLRIGWLGSIWPELPLAPGIRELGEKALETFRT 296 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 G ++ +L P E N + + +R L V GK + + Sbjct: 297 IGCEVEPCTLD------------VPRE--HNWSAWLRLRQ-LLVGGKLGAYLSDPKLFAQ 341 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 E + I ++ ++ Y + R+ + R F + FE+ D ++ PT F Sbjct: 342 LKPEAQWEIEQSRHLDAASLYQASLYRSN-----VYRAFLKLFER-FDFVVAPT--AQVF 393 Query: 415 PLGKEENNSGSMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P E + ++ + +D + +AGLP ++V A E +P+GLQL G Sbjct: 394 PFDAELHWPDAVDGVKSDTYHRWMEIVTPFTLAGLPTLNVRAGFGEGGLPMGLQLAGPIH 453 Query: 469 REETLFSVGQIIEKEAGY 486 + + +G ++ G+ Sbjct: 454 ADLDVLRLGHAYDQACGW 471 >gi|311696784|gb|ADP99657.1| amidase family protein [marine bacterium HP15] Length = 499 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 80/512 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D +R ++++ E+ ++ ++ N ++NA Q + A A+ ++ + G Sbjct: 20 DLIRRGEVTSGEVCEAAVERATRVNGKLNAI--CYPQFSEAPAQPFPEQGV------FAG 71 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHY---ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +P+ +KD + H C++ G + +S ++ + G V LG+ EF + Sbjct: 72 VPLLLKDLAQEQADHP--CTYGSRGMTKNIAPRDSEFVRRARNGGLVFLGRTATPEFGLK 129 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + E+ +GP +PW + + TPGGSSGGS AA A + + D GGSIR PA++ Sbjct: 130 AVTESELWGPTRNPWNT-----QLTPGGSSGGSGAAAAAGIVPMAGANDGGGSIRIPAAY 184 Query: 191 TGTVGIKPTYGRCSR---LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 G G+KP+ GR S +G S D +++RTVRDSA +L ++G D + Sbjct: 185 NGLFGLKPSRGRISSGPFMGEAWTGASTDH--VVSRTVRDSAAMLDVLSGPAPGDPFVIP 242 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH- 306 P Y + +S + +G+ SP + + ++ +++ A+++E SL H Sbjct: 243 QPPAPYAELVQRSPGSLKIGVFTS------SPYNTEVAPECVAAVEET-ARVLE-SLGHR 294 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-----EMYENTRSIGFGQEVKH 361 +YA P + + A A L Y G L + K+ + +TR IG Sbjct: 295 VEYAAPEFDGM--ALARCYLGLYFGEVSALMAKAKEQFGAADSDFELDTRLIG------- 345 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 +L + S Y+R R+ R F + D+ L+PTT +G+ E Sbjct: 346 -------MLGNTMPLSDYVRRRQQWNEFARALGVFFGR-YDLYLSPTTGQLPAAIGELET 397 Query: 422 --------------NSGSMGHIYNDV------------FTVAVNMAGLPAISVPAALCEK 455 N+G + H V FT N+ G PA+SVP + Sbjct: 398 PAHLKFAARLMLKLNAGKLVHRTGQVDQMALESLARTPFTQLANLTGTPAMSVPMHWTAE 457 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487 +P+G+QL G E TL + +E+ +F Sbjct: 458 GLPVGVQLGGPHGAEATLLQLAGQLEEANPWF 489 >gi|228933258|ref|ZP_04096114.1| Amidase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826419|gb|EEM72196.1| Amidase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 536 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 135/268 (50%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L ++GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEDGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ V ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGLVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 >gi|302132260|ref|ZP_07258250.1| hypothetical protein PsyrptN_12753 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 457 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+P+ KD F G T A + + + P ++ L G V LGK N+ EFA Sbjct: 74 DGVPVAWKDLFDVAGCVTTAGATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P M PGGSS GS+ AVA + ++GTDT GSIR PA+F Sbjct: 134 GLGLNPHFGTPINP---MSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTTRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|39934478|ref|NP_946754.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009] gi|39648327|emb|CAE26847.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas palustris CGA009] Length = 608 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 111/245 (45%), Gaps = 37/245 (15%) Query: 67 DARDLEGIPIGIKDCFATKGIHTQACSHILDGF--RPHYESTVTQKLWDNGAVMLGKLNM 124 D + L GIP +KD G+ T A GF P + Q+L D GAV++GK N+ Sbjct: 68 DTKPLWGIPFAVKDNIDVAGLPTTAAC---PGFASTPSETAFAVQRLLDAGAVLIGKTNL 124 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+FA G + Y PV P ++D ++ PGGSS GS+ VA L ++GTDT GS Sbjct: 125 DQFATGLVGVRTPY-PV--PRNAIDP--RYVPGGSSSGSAVVVAHGLVTFALGTDTAGSG 179 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA+ VG+KP+ G S G++ +LD + TV D+ + IA +D D Sbjct: 180 RVPAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVADAHAVYGVIAAFDREDPW 239 Query: 245 C------------------VNLPVP---------DYERALDQSIQGMTVGIPKEYRLDYL 277 + LP P + E A D ++ + +P R L Sbjct: 240 SRPHAGAPARLNALSPGLRIGLPNPASRKFADDLESEHAFDLAVADLATVVPGPVRAVDL 299 Query: 278 SPTID 282 +P D Sbjct: 300 TPLFD 304 >gi|152994400|ref|YP_001339235.1| amidase [Marinomonas sp. MWYL1] gi|150835324|gb|ABR69300.1| Amidase [Marinomonas sp. MWYL1] Length = 423 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 16/229 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I IKD F +G TQA S LDG ++ L GA +LG NM E A Sbjct: 49 LNGAIISIKDLFQVQGYKTQAGSVFLDGSLAQEDAEAVVALRKAGASLLGHTNMTELAYS 108 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +YG +P + T GGS+ G +A+VA + A++GTDTGGS+R PA F Sbjct: 109 GLGLNPHYGTPDNPINAGRIT-----GGSTSGGAASVALGVADAALGTDTGGSLRIPAGF 163 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G KP+ SR G + + SLD G I +TV + +L + ++G Sbjct: 164 CGLTGFKPSQQTVSRKGCLPLSNSLDSVGPIAKTVEECELLWQILSG-----------TT 212 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 E A + + +P + ++ L P +++ + ++ L+ A I Sbjct: 213 TSSETAKSSDADELRIVVPTNFGMNDLDPLVEEGFVAKLAQLEAASITI 261 >gi|260461146|ref|ZP_05809395.1| Amidase [Mesorhizobium opportunistum WSM2075] gi|259033180|gb|EEW34442.1| Amidase [Mesorhizobium opportunistum WSM2075] Length = 497 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 127/495 (25%), Positives = 218/495 (44%), Gaps = 46/495 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R ++SA+EL ++ I E + ++NA E + + AR A+ D+ + L G+P Sbjct: 19 VRKGELSAIELTEAAIARAEATRPEINATAEPLYEAARTRAKTMDRSL------PLAGVP 72 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD A KG+ + S I + P S +T++ G V + E + E Sbjct: 73 FAIKDLGIAIKGVPSHGGSRI-PAWLPDVNSVMTERYLAAGLVPIVTSTSPEHGLRLMTE 131 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW + +T SSGG++A VA + + +D GGSIR P++ TG V Sbjct: 132 SKAFGITRNPWNTGHTTGG-----SSGGAAALVAAGVVPVAHASDGGGSIRVPSACTGLV 186 Query: 195 GIKPTYGRCSRLGIIS---FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+K + GR ++S + +D A +TR+VRD A+LL G D P Sbjct: 187 GLKTSRGRIPLTPLVSESWYGMVVDHA--VTRSVRDCALLLDLTHGPDSLSPYAALPPKG 244 Query: 252 DYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 + A + +++ + ++ L +S K ++ ++ G + +I LP Sbjct: 245 TFAAAAARDPGKLSLAVYRKSPLGLPISAETMKALDIAVALAREGGHTVEDIDLPFIGRD 304 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEVK--------H 361 A + + A A + R + R G V G ++ TR +G G+ V Sbjct: 305 FFADFCRTVASAVAGTLRAEAQRVGRAVTG----DVERATRVLGRLGEMVSAGETYAALQ 360 Query: 362 RIMIGTYVLSSRC--YDSHYLRARKIRTLI-----KRDFTEAFEQGVDVI-LTPTTPTSA 413 R+ + L + YD+ L L R E E +D + LTP + Sbjct: 361 RLHAASRQLITETAQYDAVLLPVIAHPPLACGAMDPRGADELIENLLDKLHLTPLLKVKS 420 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 G+ + S H + N++G P+I++P + + +PLG+Q G+P EETL Sbjct: 421 V-FGQLMDKSLWFTH-----WPAIHNVSGQPSIALPVHVTDAGLPLGIQAAGRPGDEETL 474 Query: 474 FSVGQIIEKEAGYFR 488 S +EK +G+ + Sbjct: 475 LSFAAQMEKISGWLK 489 >gi|301384870|ref|ZP_07233288.1| hypothetical protein PsyrptM_19645 [Pseudomonas syringae pv. tomato Max13] gi|302062330|ref|ZP_07253871.1| hypothetical protein PsyrptK_20261 [Pseudomonas syringae pv. tomato K40] Length = 457 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+P+ KD F G T A + + + P ++ L G V LGK N+ EFA Sbjct: 74 DGVPVAWKDLFDVAGCVTTAGATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P M PGGSS GS+ AVA + ++GTDT GSIR PA+F Sbjct: 134 GLGLNPHFGTPINP---MSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|255952821|ref|XP_002567163.1| Pc21g00910 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588874|emb|CAP94988.1| Pc21g00910 [Penicillium chrysogenum Wisconsin 54-1255] Length = 538 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 137/509 (26%), Positives = 218/509 (42%), Gaps = 82/509 (16%) Query: 13 RDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI--INGDARD 70 R +L ++++SAVE+ ++ + + + E + +A A+E D I Sbjct: 69 RVKLAAQELSAVEVTTAFCKRAAIAQQLTSCLTETMFSEALVRAQELDAHIKSTGKPVGP 128 Query: 71 LEGIPIGIKDCFATKGIHTQ-ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIPI +K+ F KG+ T + LD S + L + GAV+ K N+ + M Sbjct: 129 LHGIPISMKETFNIKGVPTSLGFASFLDREPVTQNSVLVDILLEAGAVLYVKTNVPQTMM 188 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + + + +G V +P RS T GGSSGG A VA IGTD GSIR PA Sbjct: 189 TADSHNNVFGRVRNPHRS-----TLTAGGSSGGEGALVAMRGSILGIGTDIAGSIRIPAL 243 Query: 190 FTGTVGIKPTYGRCS--------RLGIISFAPSLDQAGIITRTVRDSAILLKAI--AGYD 239 GTVG KP+ GR R G+ AP AG + +VRD+ +LL+ + A D Sbjct: 244 CCGTVGFKPSIGRVPYAGQTSAGRPGMAGIAPC---AGPLCHSVRDADMLLRVVFDAPSD 300 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 + D + P +A Q +T+G+ E L P + +T I L++AG I Sbjct: 301 DMDDMALGFPWMQPVKAPTQ----LTIGVLPEDPQTPLHPNMQRTLAMAIEKLRNAGHHI 356 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGL---RVEGKDILEMYENTRSI-GF 355 V++S Q ++ + A+ + R D + L R G+ + + T + G Sbjct: 357 VDLS---KQID----FVGAAADLAFRFFRIDPDQTALQHIRKSGEPPIPSLQFTFDMEGK 409 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+E R +D + ++ +I ++R F + +DVI+ P T+A P Sbjct: 410 GEEPNLR----------EFFDLNASKS-EIAAKMRRVF---LDNHLDVIIGPGYQTTAVP 455 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE--------------------- 454 + G V+TV N+ PA +P + Sbjct: 456 ----HDTYGV------PVYTVLANVVDYPACVIPYGSSQETADAEFVRDVNYYPPYLPKE 505 Query: 455 -KKMPLGLQLIGQPFREETLFSVGQIIEK 482 + P +QLIG+ R+ETL I+E+ Sbjct: 506 VENAPCHVQLIGRRQRDETLIQHALIVEE 534 >gi|207728049|ref|YP_002256443.1| amidase protein [Ralstonia solanacearum MolK2] gi|206591293|emb|CAQ56905.1| amidase protein [Ralstonia solanacearum MolK2] Length = 393 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 20/237 (8%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNMDEFAM 129 L G+P+ IKD F G + A S L P V GAV+LG+ NM EFA Sbjct: 18 LAGLPVSIKDLFDVAGQVSAAGSRALAHQPPAAADAVAVARLRAAGAVLLGRTNMSEFAF 77 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P +D T GGS+ G + VAG + A++GTDTGGSIR PA+ Sbjct: 78 SGLGLNPHYG---TPRTPVDGTR--AAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAA 132 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G KPT R G + + SLD G + +V D ++ A+ D V L Sbjct: 133 FCALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSV-DCCAIVDAVLSGQALDTDAVPL- 190 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 G+ +G+ ++Y L T+ +++ + L+ AGA IV P Sbjct: 191 ------------AGLRLGLTRDYVGADLDDTVVTAFERAVMRLEQAGAHIVRFDFPE 235 >gi|228945566|ref|ZP_04107916.1| Amidase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814084|gb|EEM60355.1| Amidase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 536 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKVSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ V ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG+ P+ G SR GII A +LD AG + RTV+D+A L A+ GYD Sbjct: 248 TTGSIVAPAAQQSVVGLHPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|114800109|ref|YP_759938.1| amidase family protein [Hyphomonas neptunium ATCC 15444] gi|114740283|gb|ABI78408.1| amidase family protein [Hyphomonas neptunium ATCC 15444] Length = 506 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 157/303 (51%), Gaps = 23/303 (7%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74 L S+D++A L + I+A++ + ++ + I + A AE SD R G A L+GI Sbjct: 29 LTSRDLTAAYL--ARIEAVDRAGPRLQSII-ALNPNALTQAEASDARRAAGQALGPLDGI 85 Query: 75 PIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSS 132 PI +KD T + T A S L +S + L GAV+LGK N+ ++A S+ Sbjct: 86 PILLKDNIETLDPVPTTAGSLALKDNLTGRDSPLAAGLRAQGAVILGKTNLSQWANFRSN 145 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 N S + V R+ D+ +P GSS G+ AA+A L AA +GT+T GSI PA+ G Sbjct: 146 NSISGWSSVGGQVRNPHMLDR-SPCGSSSGTGAAIAASLAAAGVGTETNGSIICPANVNG 204 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG KPT GR + GI+ +PS D AG +T+TV +A+L+ A+ + A ++ Sbjct: 205 LVGFKPTVGRIPQQGIVPISPSQDTAGPMTKTVTGAALLMDAMDAGETGYAAALS----- 259 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 ++++G +G+ + + I + +S L+ GA+IVEI +Y++P Sbjct: 260 -----TEALKGKRIGVLRAVVGS--NQDIITRFNGSVSILRSLGAEIVEIE----KYSVP 308 Query: 313 AYY 315 + Sbjct: 309 GDF 311 >gi|146337479|ref|YP_001202527.1| putative amidase (amiD) [Bradyrhizobium sp. ORS278] gi|146190285|emb|CAL74281.1| putative amidase (amiD) [Bradyrhizobium sp. ORS278] Length = 450 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 116/423 (27%), Positives = 177/423 (41%), Gaps = 56/423 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP+ IKD AT + T S I P ++ V +L D GA + GK EFA Sbjct: 65 LGGIPVAIKDVIATSDMPTTNGSAIYRDHVPDADAWVVARLRDLGATIFGKTVSTEFAW- 123 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + GP ++PW TPGGSS GS+AAVA L ++GT T GS+ +PA+F Sbjct: 124 -----RHPGPTVNPWNP-----AHTPGGSSSGSAAAVAAGLVPLALGTQTLGSVIRPAAF 173 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG KP++G R G+ +PSLD G R V D A+ L +AG D P+ Sbjct: 174 NGVVGFKPSFGAIPRTGVHPLSPSLDHVGFFARRVDDVALALSLLAGRSADD--LHGRPL 231 Query: 251 PDYERALDQSIQGMT---VGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P + + + + + + + + + ++ I L+ AGA I E++L Sbjct: 232 PGFSVDIGHGLAPLAKPRLAVVRFAKWERAEAEQKAVFEAVIDKLRGAGAAIEEVALTEL 291 Query: 308 QYA-LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 A A I +EA++ + D++ Y + S +M G Sbjct: 292 DSASWDAINTIMLSEATTIFS--------------DLIARYPDRVS---------DVMKG 328 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF---PLGKEENNS 423 +V S R + A K ++ A G D +LT AF P G + Sbjct: 329 -HVESGRAKTAMAYLAAKATQAARQTALAAELAGHDAVLT----LPAFGEAPRGLDWTGD 383 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 + G PA+++PA +PLG+Q+ G + L V + +E Sbjct: 384 AE--------YCAPWTFVGAPAVALPAGFGRNGLPLGVQVAGTYRNDLQLLRVAKWVETA 435 Query: 484 AGY 486 + Sbjct: 436 LAF 438 >gi|313498886|gb|ADR60252.1| Amidase [Pseudomonas putida BIRD-1] Length = 485 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/467 (26%), Positives = 206/467 (44%), Gaps = 52/467 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRIINGDARD-LEG 73 + ++ +S E++ +Y+ IE N Q+NA + + A+ A AE D+ + G +R + G Sbjct: 21 IHARQLSCREVMQAYLGHIERFNRQVNALVSLRPAEVLLAEAETRDRELARGHSRGWMHG 80 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P IKD AT G+ T S + P ++ ++ +GA+++GK N+ EF +GS + Sbjct: 81 MPQAIKDLAATAGLCTTLGSPLFAEQVPEQDAISVARVRASGALIMGKSNVPEFGLGSQS 140 Query: 134 ETSYYGPVISPWRSMDSTDKFTPG----GSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +G +T+ + P GSSGG++AA+A L + G+D GS+R PA+ Sbjct: 141 YNPLFG---------TTTNAYDPSRVAGGSSGGAAAALAMRLLPVADGSDMMGSLRNPAA 191 Query: 190 FTGTVGIKPTYGRCSRLGIIS-FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 F G++P+ GR F L G + R+V D A LL AG D ++ Sbjct: 192 FNNLFGLRPSQGRVPHGPAPELFVQQLATEGPMGRSVVDVARLLSIQAGVDARAPLSLSE 251 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D+ L +G+ VG +Y YL P D +S + A A E+ + Sbjct: 252 GRRDFAVGLPSDFRGVRVGWLGDYN-GYL-PMDDGV----MSLCESALADFAELGC-RVE 304 Query: 309 YALPAYYIISPAEASSNLAR----YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 PA+ +LAR + R+ L V G + + E + + Sbjct: 305 ACQPAF----------DLARLWQCWLTHRHFL-VHGNLGAAYADPGKRALLKPEAQWEVE 353 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G + ++ Y + R+ R + K FE+ D +L P+ FP + Sbjct: 354 GGLQLSAAALYQASLDRSDWYRAMGK-----LFER-YDFLLLPS--AQVFPFDARQPWPT 405 Query: 425 SMGHIYNDVF------TVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 +G D + + +AGLP+ISVP +P+GLQ+IG Sbjct: 406 VVGGRAMDTYHRWMEVVIGPTLAGLPSISVPVGFNAAGLPMGLQIIG 452 >gi|90418220|ref|ZP_01226132.1| putative amidase [Aurantimonas manganoxydans SI85-9A1] gi|90337892|gb|EAS51543.1| putative amidase [Aurantimonas manganoxydans SI85-9A1] Length = 422 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 115/418 (27%), Positives = 188/418 (44%), Gaps = 68/418 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P G KD F + + T+ S I G +P ++ V GA ++GK EFA Sbjct: 62 LAGVPFGAKDVFDSFDMPTEHGSAIYRGHQPAADAPVIALARAQGAAIVGKTATTEFA-- 119 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S + T P R+ + D TPGGSS GS+A VA A + GT TGGS+ +PASF Sbjct: 120 SLDPT--------PTRNPHNPDH-TPGGSSSGSAAGVAAGYLAGACGTQTGGSVIRPASF 170 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G KP++ +G+ +++ SLD G TV D A+L I+G D + Sbjct: 171 CGVAGYKPSFRLFPTVGVKTYSWSLDTVGFFAATVPDVALLAALISGRPLADTPPAD--- 227 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 G+T+G+ + D L P + W ++ AGAK++EI+ P Sbjct: 228 ----------ASGLTIGLYRSAVDDLLEPDMAAAWDTAARAIEAAGAKLIEIAEP----- 272 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 AS + AR E L+ +E +++ F + +HR ++G VL Sbjct: 273 -----------ASLSAAR----------EIHAPLQNFEAAQAL-FHERTRHRALMGPKVL 310 Query: 371 S-----SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 + Y AR+ + ++ T FE D +L P+ +G + GS Sbjct: 311 EQLDHGASVTPEEYDDARRTARIGRKAATTLFEN-ADALLVPSA------IGAAPYSLGS 363 Query: 426 MGH-IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 G ++N ++T+ N P ++VP +P+GL ++ + R+ ++ ++E+ Sbjct: 364 TGDAMFNKLWTITGN----PCVNVPGLHAANGLPVGLTIVTRFGRDARALAIAAMLEQ 417 >gi|326528433|dbj|BAJ93405.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 507 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 23/295 (7%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIGIK 79 +++ LV Y+ I N ++A IEV R A +R +G A L G+P+ +K Sbjct: 45 LTSRALVRFYLDQIGRLNPLLHAVIEVNPDALRQAKRADAERRSSGHATGSLHGVPVLLK 104 Query: 80 DCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D AT+ ++T A S L G ++ V +L GAV+LGK ++ E+A + Sbjct: 105 DNIATRDALNTTAGSLALLGSVVRRDAGVVARLRRAGAVVLGKASLSEWA--------NF 156 Query: 139 GPVISPW--RSMDSTDKF----TPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 V + W R + + + TP GSS GS A A + A ++GT+T GSI P+SF Sbjct: 157 RQVDAGWSARGGQARNPYVLSSTPCGSSAGSGVAAAANMAAVTLGTETDGSILCPSSFNS 216 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN----- 247 VGIKPT G SR G+I P D G + RTV D+ +L AI GYDE DA Sbjct: 217 VVGIKPTLGLTSRAGVIPITPLQDTVGPMCRTVSDAVHVLDAIVGYDEHDAAATGAASKY 276 Query: 248 LPVPDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +P Y + ++G +G+P + Y ++ ++Q ++ ++ GA +VE Sbjct: 277 IPRGGYTQFLKKDGLKGKKIGVPNGFFQGYGQAQLN-VYKQHLATMRKLGAVVVE 330 >gi|310791825|gb|EFQ27352.1| amidase [Glomerella graminicola M1.001] Length = 440 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 119/492 (24%), Positives = 200/492 (40%), Gaps = 75/492 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ +E+ ++R+ D++ E S + IE + + A+ + + A A+E D I Sbjct: 8 LSATEASAKIRAGDLTVEEYARSLLSRIEQRDPVVKAWEYINPDQVIARAKELDA--IPP 65 Query: 67 DAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 + R L G+ + +KD TK + TQ S I G P ++ L GA+ LGK Sbjct: 66 EKRGPLHGVAVAVKDIIYTKDMPTQHGSPIYAGDAPKVDAGSIIVLRQAGALFLGKTTTT 125 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 EFA G V P TPGGSS GS AAV F ++GT TGGS Sbjct: 126 EFA----------GTVRGPKTVNPHDTSRTPGGSSSGSGAAVGDFQAPIALGTQTGGSTI 175 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 +P SF G +KPT+ SR G ++ LD G R+V D ++ D D Sbjct: 176 RPGSFNGIYALKPTWNSISREGQKIYSLILDTLGFFARSVEDLQLMA------DVFDLQD 229 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P P++ S++G + K P + L+ GA + E+ Sbjct: 230 DEAPKPEF------SVKGAKFALIKTMVWPQAGPGTQSAIAKATELLRKHGADVEEVEFA 283 Query: 306 HTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEMY-----ENTRSIGFGQE 358 LPA++ ++ + L Y RV KD+L+ + +NT I + Sbjct: 284 PELQDLPAWHGTVLHSDGRPTFLPEY-------RV-AKDLLDEFLVSHVDNTNKISRAAQ 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 ++ +D+ + K+ ++ + D +L P+ A P+G Sbjct: 336 LE-------------AFDNIAMARPKVDKMLGK---------YDAVLVPSVVDEA-PVGT 372 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS--- 475 S + ++ + +P +++P MP+G+ L+ + + L + Sbjct: 373 ASTGSAAFNGLWTALH--------VPVVNIPGFKGPNGMPVGVSLVAPRYHDRHLLTVSK 424 Query: 476 -VGQIIEKEAGY 486 VG+I E E G+ Sbjct: 425 AVGEIFEAEGGW 436 >gi|300694647|ref|YP_003750620.1| amidase [Ralstonia solanacearum PSI07] gi|299076684|emb|CBJ36023.1| Amidase [Ralstonia solanacearum PSI07] Length = 507 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 135/516 (26%), Positives = 223/516 (43%), Gaps = 75/516 (14%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 +EL + E R + ++ +S VEL+++ I+ IE N +NA +AR AA +++ Sbjct: 5 AELVGLCAVELRRMIGARTLSPVELLEACIERIEIVNPAVNAITATCYPQAREAARAAER 64 Query: 62 RIINGDARDLEGIPIG-IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 +++G+ L +KD T G+ T S P + + ++L GAV++ Sbjct: 65 AVLDGEPLGLLHGLPLGVKDLEDTAGLLTTYGSPTARANVPARDVLLVKRLRAAGAVLVA 124 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K N+ EF G++ +G +P+ M GGSSGG++AA+A + G+DT Sbjct: 125 KTNVPEFGAGANTRNPVWGATGNPFNPM-----LNAGGSSGGAAAALACDMLPVCTGSDT 179 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGS+R PA+ G VG +P+ G ++ + P L G + RTV ++ + L A AG Sbjct: 180 GGSLRIPAAKCGVVGFRPSPGLVPNTRKLLGWTP-LSVVGPMGRTVAEACLQLAATAG-- 236 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG---ISWLKDAG 296 ++ G P Y D L+ G + W +D G Sbjct: 237 ------------------------LSAGDPLSYDADPLAFATPAPIDLGTLRVGWTEDFG 272 Query: 297 AKIVEISL------------PHTQYALPAYYIISPAEASSNLARYDGVRYGLR-VEGKDI 343 V+ + P + P + + ++ R + G+R +D Sbjct: 273 CCDVDAGIRALFRERMAAIAPMFRLCEPVRFELGDVHRCFDVVRAESFVAGMRDAYARDP 332 Query: 344 LEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDV 403 + NTR+ +G + + C +H + R ++KR F AF DV Sbjct: 333 ASLGPNTRA---------NYELGAAMTLADCAWAHAEQTR----ILKR-FQAAFAH-YDV 377 Query: 404 ILTPTTPTSAFP---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPL 459 IL+PTTP S FP L + + + + Y + T V + PA+S+P + MP Sbjct: 378 ILSPTTPVSPFPWSELYAAQIDGRAQENYYRWLALTYVVTLTTHPALSLPCGVDHAGMPF 437 Query: 460 GLQLIGQPFR--EETL---FSVGQIIEKEAGYFRPH 490 GLQ++G PFR +TL ++ Q E A RP Sbjct: 438 GLQIVG-PFRGDRKTLAVAHALEQACEASATLRRPR 472 >gi|289165003|ref|YP_003455141.1| amidase [Legionella longbeachae NSW150] gi|288858176|emb|CBJ12042.1| putative amidase [Legionella longbeachae NSW150] Length = 578 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 143/497 (28%), Positives = 228/497 (45%), Gaps = 68/497 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSN------SQMNAYIEVVAQKARAAAEESDKRIINGDAR 69 +++ +++ +L++ Y++ I+ N + +NA++E+ Q A DK I + Sbjct: 47 IKNHELTCEQLINLYLERIKKYNLSAGEFAPINAFVEI-NQNVIWQARRLDK--IYSKTQ 103 Query: 70 DLEG----IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 L G IPI +KD T T + S L G +P +++ + +L GA++LGK MD Sbjct: 104 KLMGTLHCIPIILKDNINTYDATTSSGSLALLGNQPSHDAFLVTQLRKAGAIILGKAGMD 163 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E A G +S G + + + + K PGGSSGGS+AA++ IGTD GS+R Sbjct: 164 ELAAGMFGISSRTGRIGNVYDT-----KKNPGGSSGGSAAAISANFAVIGIGTDNSGSVR 218 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 PA+F G G++P+ G S+ GI AG +TRTV+D A +L IA + D Sbjct: 219 IPAAFNGIYGLRPSTGLISQSGIFPSGNLDGTAGPLTRTVQDLAHVLDVIAKVNPEDMKT 278 Query: 246 VNLPVPD-YERALDQS-IQGMTVGIPKEY----RLDYLSPTIDKTWQQGISWLKDAGAKI 299 +P Y L++ + G +GI + + I K +QQ + K +GA I Sbjct: 279 ATVPREKTYTVYLNEDGLIGKRIGIVHKVGARNVFKEMPDDILKIFQQALVTFKKSGATI 338 Query: 300 V-EISLPHTQYALPAYYIISPAEASSNLA--RYDGVRY-----GLRVEGKDILEMYENTR 351 + E+ LP + SSN+A R D RY +R K+ ++ + R Sbjct: 339 ISEVDLPEFN-----------TDRSSNMAGMREDVDRYLSSSPSVR---KNFQDLCASNR 384 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF--EQGVDVILTPTT 409 FG EV I T + Y S Y A K+ R + E ++ +D +L P + Sbjct: 385 IRVFG-EVPECIKFFTSMPIK--YGSKYESALKLFAK-NRTYVEELMKQEKLDALLIPIS 440 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 E N+ + VA N + LP+I++ +MP+G++LIG Sbjct: 441 TVGIATYDPYEVNTW--------LAPVASN-SSLPSITINFGY-HNQMPVGVELIG---- 486 Query: 470 EETLFSVGQIIEKEAGY 486 T FS G++IE Y Sbjct: 487 --TQFSEGKLIEMAYAY 501 >gi|37520530|ref|NP_923907.1| allophanate hydrolase [Gloeobacter violaceus PCC 7421] gi|35211524|dbj|BAC88902.1| glr0961 [Gloeobacter violaceus PCC 7421] Length = 608 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 121/425 (28%), Positives = 194/425 (45%), Gaps = 55/425 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P +KD G+ T A C G P + V ++L GA+ +GK N+D+FA Sbjct: 70 LYGVPFAVKDNLDLAGVPTTAGCPGFAYG--PEKTAPVVERLMAAGAIPVGKTNLDQFAT 127 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G + YG +P+ ++ PGGSS GS+ AVA L + ++GTDT GS R PA+ Sbjct: 128 GLVGTRTPYGVCRNPFDR-----RYLPGGSSAGSAVAVAAGLVSFALGTDTAGSGRVPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 FT TVG+KPT G S G++ SLD I T D+ +L AG+D D P Sbjct: 183 FTNTVGLKPTRGLLSTRGLVPAVRSLDCVSIFALTCEDAGAVLSVAAGFDPDDPFSRRAP 242 Query: 250 ---VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKT----WQQGISWLKDAGAKIVEI 302 P ++R + VG+P+ DYL D+ ++ ++ L+ G +++ I Sbjct: 243 AVETPSFDR--------LRVGVPET---DYLEFFGDRAAQGRYRAALARLEALGCELITI 291 Query: 303 SLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 +A A + + LA D LE S+ V + Sbjct: 292 DF--GPFADTARMLYGGPWVAERLAAV-----------GDFLE--REPESV---HPVVYE 333 Query: 363 IMIGTYVLSSRCYD--SHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 I+ G +R YD S Y A ++ L R +E Q +DV+ PTT T + + + E Sbjct: 334 IIAG----GAR-YDAVSAYKAAYRLAGL--RRLSEGQWQQMDVLALPTTGT-IYTVAEVE 385 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQII 480 + ++ + ++T VN+ L A++VP+ + +P G+ + ++E L +G + Sbjct: 386 RDPIAL-NANLGLYTNFVNLLDLCALAVPSGPGKAGLPTGITFVAPAWQETLLCRLGGVF 444 Query: 481 EKEAG 485 G Sbjct: 445 HPWPG 449 >gi|229132796|ref|ZP_04261641.1| Amidase [Bacillus cereus BDRD-ST196] gi|228650623|gb|EEL06613.1| Amidase [Bacillus cereus BDRD-ST196] Length = 536 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/273 (31%), Positives = 134/273 (49%), Gaps = 18/273 (6%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N E+ A + +R +N Sbjct: 73 VDELQKMVDDGKLSYEELTSIYLFRIQEHDQNGISLNTVTEINPNAMEEARQLDKERFLN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T + T A +++L + ++ + +KL + GA +LGK NM Sbjct: 133 KKS-NLYGIPVIVKDNVQTANVMPTSAGTYVLKDWIADEDAMIVKKLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L ++ GYD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNSMVGYD 307 Query: 240 ECDATCVNLP---VPDYERALD-QSIQGMTVGI 268 DA + DY + L ++G +GI Sbjct: 308 GKDAMIEKMKDRDRMDYTKELSIDGLKGKKIGI 340 Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G+ +G+ F E+ LF++G E+++ R K Sbjct: 484 VAGYPELAVPAGYDSDGQPVGVVFVGKQFGEKELFNIGYAYEQQSKNRRSPK 535 >gi|209521667|ref|ZP_03270359.1| Amidase [Burkholderia sp. H160] gi|209497907|gb|EDZ98070.1| Amidase [Burkholderia sp. H160] Length = 336 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 11/210 (5%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 ++ L F + + L +SAV+L++ + I + +NA + + ARAAA E+D Sbjct: 14 LNALTFASAKQQAHALAEGRVSAVDLLEHSLARIARFDDVLNAVVVRDFEAARAAAREAD 73 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + G+ R L G+PI +K+ F G+ T + R +S L + GAV++G Sbjct: 74 AALARGERRPLLGVPITVKESFDVAGLATSVGNPAFADNRAERDSLAVAALREAGAVIIG 133 Query: 121 KLNMDEFAMGSSNETSY---YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 K N+ +G ++ SY YG +PW + TPGGSSGGS+ A+A A IG Sbjct: 134 KSNV---PLGLADLQSYNEVYGLTRNPW-----DLERTPGGSSGGSAVALAAGYVALEIG 185 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG 207 +D GGSIR PA FTG G KP+YG S +G Sbjct: 186 SDIGGSIRIPAHFTGVFGHKPSYGLVSLVG 215 >gi|195037659|ref|XP_001990278.1| GH18321 [Drosophila grimshawi] gi|193894474|gb|EDV93340.1| GH18321 [Drosophila grimshawi] Length = 536 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 128/497 (25%), Positives = 197/497 (39%), Gaps = 58/497 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK------ 61 +V E LR + + +LV +YI + N +NA IE + A A+ +D+ Sbjct: 45 SVIELVTELRRGQLQSEQLVRAYIGRVREVNPSLNAVIEERFEAALNEAKHADEFMARAI 104 Query: 62 ----RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 R+ L G+P +K+ KG+ Q S + G + + V + + G + Sbjct: 105 TEFDRVALFTRYPLLGVPFTVKESCGVKGLSFQVGSLVRKGMKAPQDGDVVELVRAAGGI 164 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 L EF M + T G ++P+ S P GSSGG A IG Sbjct: 165 PLLVSATPEFCMSAETSTVANGRCLNPYDLSRS-----PAGSSGGEGALNGCGATPFGIG 219 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA------PSLDQAGIITRTVRDSAIL 231 +D GGSIR PA F G G KPT G S G ++ P+ Q G ITR RD +L Sbjct: 220 SDIGGSIRLPAMFCGVFGHKPTGGLTSVKGHFPYSLLDNNFPNYLQIGPITRFARDMPLL 279 Query: 232 LKAIAGYDECDATCVNLPVP--DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ--- 286 L+ +AG D +N PVP D + G+ L P +D + Sbjct: 280 LEIMAG-DNKHKLKINEPVPLKDIQIHYAFGFSGLN---------GLLHPAVDSEIKLSI 329 Query: 287 -QGISWLKDAGAKIVEISLPHT----QYALPAYYIIS--PAEASSNLARYDGVRYGLRVE 339 + I L AG + E+ L + AL A + P+ + R +R L +E Sbjct: 330 VRAIKCLAKAGIQPKELDLSFLRNSFEIALVALVDLKGLPSIITQQAHRAPHMR-ALIME 388 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 + L + E+ R+ + Y ++ R T DF ++ Sbjct: 389 MLNSLFGHSIFTKEALFMELMQRVNGLMCPIRMEQYRQELVQLRAHLT----DFLG--DR 442 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 G V+ PT TSA S+ +I + N+ GLPA V L + MP+ Sbjct: 443 G--VLFLPTFHTSALSF------HSSLLNITGIDSLLLFNVLGLPATHVTMGLNRRGMPI 494 Query: 460 GLQLIGQPFREETLFSV 476 G Q+I P++++ + Sbjct: 495 GFQVIAAPYQDKLCLQI 511 >gi|188989713|ref|YP_001901723.1| amidase [Xanthomonas campestris pv. campestris str. B100] gi|167731473|emb|CAP49648.1| Glu-tRNA(Gln) amidotransferase [Xanthomonas campestris pv. campestris] Length = 435 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 111/412 (26%), Positives = 189/412 (45%), Gaps = 72/412 (17%) Query: 83 ATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVI 142 A G+H A + +L ++ V Q+L D GAV++G NMDEFA G + ++YG Sbjct: 73 ANDGLH--AITRLLPARA-AADAAVVQRLSDAGAVLVGTANMDEFAYGFATVNAHYGTTA 129 Query: 143 SPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGR 202 +P + GGSSGGS+AAVA ++G+DT GSIR PA+ G G++PT+G Sbjct: 130 NP-----HDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCGVYGLRPTHGA 184 Query: 203 CSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQ 262 G+ F +LD G +V D + + + G+ PVP ++++ Sbjct: 185 LPLQGVFPFVDALDVVGPFATSVADLRRVYEVMHGH----------PVPACSV---ETLR 231 Query: 263 GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 +G + +D + G+ L A + LP + A A ++++ AE Sbjct: 232 IAQLG-------GWFQRNLDPELETGLGTLLAAIGSTTIMELPDAERARAAAFVLTAAEG 284 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLR- 381 G R+ ++ L +T++ F + R++ G + +S D+H+ Sbjct: 285 --------GHRH------RNAL----STQAAQFDPATRDRLLAGLQLPASAVADAHHFAH 326 Query: 382 --ARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE--------NNSGSMGHIYN 431 AR +R L R VDV++ P TP A + +E + ++G Sbjct: 327 WFARAMRMLWDR---------VDVLIAPATPGVAPRIDQESIIIDGLPVSARANLG---- 373 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 +FT + +A P ++ P ++PLG+QLI P RE+ LF++ +E++ Sbjct: 374 -IFTQPLGLAACPVLAAPLPR-PGRLPLGVQLIAAPGREDRLFALAAQLERD 423 >gi|169599577|ref|XP_001793211.1| hypothetical protein SNOG_02612 [Phaeosphaeria nodorum SN15] gi|111068223|gb|EAT89343.1| hypothetical protein SNOG_02612 [Phaeosphaeria nodorum SN15] Length = 440 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 126/494 (25%), Positives = 214/494 (43%), Gaps = 65/494 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SEL + +E +++ +I+ ++ +S ++ IE + + A+ ++ A+ D Sbjct: 3 SELYRLTATEISAKIKVGEITVLDYANSLLKRIEARDDAVQAWAYFKSEYLLEQAKALDA 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 I + + L G+ I +KD TK + TQ S I G P ++ L GA+++GK Sbjct: 63 -IPSAERGPLHGVAIAVKDVIYTKDMPTQFNSPIYAGDAPRVDAGSIAILRKAGALIVGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + + GP ++ + D K TPGGSS GS AAV +GT T Sbjct: 122 TTT------TEFAATTTGP-----KTRNPHDSKRTPGGSSSGSGAAVGDCQAPIGLGTQT 170 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GGS +P S+ G +KPT+ +R G ++ D G+ R V D +L A A D+ Sbjct: 171 GGSTIRPGSYNGIYALKPTWNSITREGQKIYSLIFDTLGLYARGVADLELLADAFALQDD 230 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 A N V + AL +++ VG LD + +S L+ GA++ Sbjct: 231 EPAPT-NFAVKGAKFALLKTMVWPQVGSGTTAALD-----------KAVSLLRAQGAEVE 278 Query: 301 EISLPHTQYALPAYY--IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 EIS P LPA++ +++ ++ L Y + + + ++ EN+ I ++ Sbjct: 279 EISFPSHLDDLPAWHRSVLNSDGRTAFLPEYTVAKDKI---SEQLVGHVENSDQISRKEQ 335 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 + +D + AR + I + D +LTP+ P A PLG Sbjct: 336 LD-------------AFD-NIAAARPVVDKILGKY--------DAVLTPSVPDEA-PLGI 372 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF---- 474 E+ S + I+ + T P ++VP E MP+G+ L+ + + L Sbjct: 373 EKTGSAAFCLIWTALHT--------PVLNVPGFKGENGMPIGVSLVAPRYHDRRLLAVGK 424 Query: 475 SVGQIIEKEAGYFR 488 SVG + E E G+ R Sbjct: 425 SVGALFEAEGGWKR 438 >gi|116686301|ref|YP_839548.1| amidase [Burkholderia cenocepacia HI2424] gi|116652016|gb|ABK12655.1| Amidase [Burkholderia cenocepacia HI2424] Length = 623 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 134/501 (26%), Positives = 216/501 (43%), Gaps = 78/501 (15%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII 64 +++ R R + D++ LVD+ I A ++ +A+I + + D+ + Sbjct: 11 GLRSIAALRARYAAGDLTPHALVDA-IAAHFDAGDPHHAWIRPLTR---------DEMMS 60 Query: 65 NGDA---RD-----LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNG 115 DA RD L G+P IKD GI T A C + P + V ++L G Sbjct: 61 YADALAGRDIASLPLYGVPFAIKDNIDLAGIPTTAGCPAY--AYTPARSAPVIERLIAAG 118 Query: 116 AVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAAS 175 A+ +GK N+D+FA G S + S YG + ++DS ++ GGSS GS+ AVA + S Sbjct: 119 AIPVGKTNLDQFATGLSGQRSPYGACRN---ALDS--RYASGGSSSGSAVAVALGVATFS 173 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 +GTDT GS R PA+F G VG+KPT G S LG++ SLD + R+ D+ + A Sbjct: 174 LGTDTAGSGRVPAAFHGLVGLKPTRGVLSTLGVVPACRSLDCVSVFARSADDARTVFAAA 233 Query: 236 AGYDECDATCVNLPVPDYERALD-------------QSIQGMTVGIPKEYRLDYLS-PTI 281 G + D Y RA + + + G P+ +L++ + Sbjct: 234 HGVMDGD---------PYGRAWQPLLGADGLRVQPARPLAQLRFGTPRADQLEFFGDASY 284 Query: 282 DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGK 341 W + L+ GA++VEI P A++ L YDG R+ Sbjct: 285 RAAWGAALERLRATGAQVVEIDF-------------EPFLAAARL-LYDGPWVAERLAAI 330 Query: 342 DILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV 401 E V I+ G S+ + + R +R D A++ G+ Sbjct: 331 GAFAAREPDAL----HPVIREIVGGASRFSAADAFAAFDRLAALRV----DAARAWD-GL 381 Query: 402 DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKM 457 D I+ PT+ T+A + E + ++ + +T VN+ L AI+VPA C + Sbjct: 382 DAIVMPTSATTAT-VDALEADPIAINSRFG-YYTNFVNLLDLSAIAVPAGTCSTGPHAGL 439 Query: 458 PLGLQLIGQPFREETLFSVGQ 478 P G+ +G+ + L + Q Sbjct: 440 PFGITFVGRAHDDARLLDLAQ 460 >gi|297194207|ref|ZP_06911605.1| amidase [Streptomyces pristinaespiralis ATCC 25486] gi|297152167|gb|EFH31569.1| amidase [Streptomyces pristinaespiralis ATCC 25486] Length = 421 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 129/438 (29%), Positives = 196/438 (44%), Gaps = 40/438 (9%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 R D S VE + ++ IE + ++NA++ V A++A A AE S +R G+ L+G+P Sbjct: 18 RKGDFSPVEATRAALERIEETEPRVNAFVRVDAEEAVAQAEASARRWHRGEPEGLLDGVP 77 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD +G T S + G P E + +L + AV LGK EF + Sbjct: 78 VTVKDLLLQRGGPTLRGSWTIGGDGPWDEDAPSVARLRAHNAVFLGKTTTPEFGWKGVTD 137 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + YG +PW + SSGGS+AAVA A S+GTD GGS+R PASF G Sbjct: 138 SPRYGVTRNPWDPSRTAGG-----SSGGSAAAVALGAGALSLGTDGGGSVRIPASFCGVF 192 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYE 254 G+KPTYGR F +L G +TR D+A++L I G D D + + P Sbjct: 193 GLKPTYGRVPMYPSSPFG-TLAHVGPLTRDAADAALVLDVITGEDWRDWSHLG-PSSSVA 250 Query: 255 RALDQSIQGMTVGI-PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 L + ++G+ + P + P + ++ + L DAGA + E P + A Sbjct: 251 AGLAEGVKGLRIAYSPSFGGQVAVRPAVAAAVRRAVGALADAGAYVEEAD-PDVADPVEA 309 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 ++I+ ++ L ++ G R++ R I V + Sbjct: 310 FHILW-FSGAARLVQHLGTEQRARLD--------PGLREI---------------VAAGA 345 Query: 374 CYDS-HYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYN- 431 Y + YL A R + R F D+++TPT P +AF G E +GS H + Sbjct: 346 GYSALDYLAAVDTRMALGRRMGR-FHTSYDLLVTPTLPITAFEAGAEV-PAGSPHHRWTG 403 Query: 432 -DVFTVAVNMAGLPAISV 448 FT N+ PA SV Sbjct: 404 WTPFTYPFNLTQQPAASV 421 >gi|148253589|ref|YP_001238174.1| amidase [Bradyrhizobium sp. BTAi1] gi|146405762|gb|ABQ34268.1| Indoleacetamide hydrolase [Bradyrhizobium sp. BTAi1] Length = 524 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 121/486 (24%), Positives = 207/486 (42%), Gaps = 46/486 (9%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +RS +S+VE+ +++I + N ++NA + +++ A AA +DK L G+P Sbjct: 72 IRSGAVSSVEVTEAHIARMAEVNPKLNAVVVDLSEDALKAARAADKS--RNKTGLLHGVP 129 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IK+ +G G ++ V + L + GA++LG N EF+ + Sbjct: 130 VTIKENVDYQGRPNPNGVPAQMGIIAPSDAPVVRNLKNAGAIVLGLTNTPEFSFRGFTDN 189 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +G ++PW + + T GGSSGG+ AAVA + + G D GGS+R PA G V Sbjct: 190 PLHGLTLNPWDA-----EITCGGSSGGAGAAVAAGIGTIAHGNDIGGSLRWPAHCNGVVT 244 Query: 196 IKPTYGRCSRLGIIS------FAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 IKPT GR + A + G + R+V D + L+ ++ D D V P Sbjct: 245 IKPTQGRIPAYNESAAAERPLLAHLMSSQGPLARSVADVRLALEVMSRRDPRDPWWV--P 302 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P + I+ IP + +D P ++ +Q L+ +G ++ E+ +P Sbjct: 303 APLEGDKPKRPIKVALAKIPDDMEVD---PAVEAALRQAADHLERSGYRVSEVEVPDISG 359 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 + I E + E K + E+ G K ++ Sbjct: 360 VWQTWCDIITNEVV------------VMQEAKMLAVTSEDFHKAWGGMRAKAEMLDLAGW 407 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH- 428 +++ S ++RA ++ F + V+L PTT P +++ S Sbjct: 408 MNATAQRSTHIRAWQL-----------FFEDYPVVLAPTT-VKPTPGPRDDTVSAERVRE 455 Query: 429 -IYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGY 486 +N++ F A+N+ GLP VP + + P+G+QLI +RE+ IEK AG Sbjct: 456 IFFNEIRFISAINVLGLPGAVVPVTVHHNQ-PIGVQLIAGRYREDLALDAAAAIEKRAGM 514 Query: 487 FRPHKW 492 W Sbjct: 515 LVRQLW 520 >gi|115358738|ref|YP_775876.1| amidase [Burkholderia ambifaria AMMD] gi|115284026|gb|ABI89542.1| Amidase [Burkholderia ambifaria AMMD] Length = 446 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 107/424 (25%), Positives = 176/424 (41%), Gaps = 43/424 (10%) Query: 63 IINGDARD--LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVML 119 ++ G A D L G + +K CF +G T A S +L P ++ + L GAV++ Sbjct: 56 VLRGGAVDAPLAGAVLTVKACFDCEGWVTHAGSRVLADEPPARTDAAMVSMLRRAGAVLV 115 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 + M EFA G+ YG +P +D+ + GGSS G++ +VA S+G+D Sbjct: 116 AQTAMTEFAYGALGVNRAYGTPTTP---LDTRRERVAGGSSSGAAVSVALGAADLSLGSD 172 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS R PA+F G G KP+ GR + G+ + S D G++ TV Sbjct: 173 TSGSARIPAAFCGVTGFKPSRGRYASDGMQLLSTSFDVPGLLAATV-------------G 219 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 C V L D R +I+ + +P+ + D + P + + + +S L GA+I Sbjct: 220 LCRQADVALHGRDARRRRPATIRDLQFVVPEPFATDDVDPVVGRAFDAWLSRLSAHGARI 279 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 L AEA + +AR G+ E + R+ Sbjct: 280 RRKRLDCV------------AEAGA-VARAGGIIAA---------EAFMLHRARLATAAD 317 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 ++ ++G + + +H A +R D A D +LTPT P + + Sbjct: 318 RYDPLVGARIAAGEQVRAHDYAAALLRLAALADTYHAELGDADAVLTPTVPMLPPRVAEL 377 Query: 420 ENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + + T N LP+ISVP L + P+GL + G+ + L V Sbjct: 378 ADEAAYLEQNARTFRLTEFANRLDLPSISVPGDL-RNRQPVGLLITGRRHEDARLLDVAA 436 Query: 479 IIEK 482 ++E+ Sbjct: 437 MVER 440 >gi|302887787|ref|XP_003042781.1| hypothetical protein NECHADRAFT_52025 [Nectria haematococca mpVI 77-13-4] gi|256723694|gb|EEU37068.1| hypothetical protein NECHADRAFT_52025 [Nectria haematococca mpVI 77-13-4] Length = 439 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 119/491 (24%), Positives = 206/491 (41%), Gaps = 62/491 (12%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + +++ ++R+KD++ + S ++ I++ + + A+ + A + DK Sbjct: 4 QLWRLTATQALGKIRAKDLTIEQYASSLLERIKHRDDDVRAWAYLDPAAILEQARQLDK- 62 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + + R L G+P+ +KD TK + T S I ++ L + G ++ GK Sbjct: 63 -VPFEKRGPLHGLPVAVKDIIYTKDMPTAHGSPIYKDHLVKVDAGSVSILRNAGCLIFGK 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EFA + GP R+ ST + TPGGSS GS AAVA F ++G+ T Sbjct: 122 TTTTEFA------AVFAGPKT---RNAHSTSR-TPGGSSSGSGAAVADFQVPVALGSQTM 171 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI +PASF GT G KPT+ +R G A + D G TR+V D L+ A +D+ Sbjct: 172 GSIVRPASFNGTYGFKPTWNAITREGQKFSALTFDTIGFFTRSVDDVEALMDLFAVHDDE 231 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 ++ + ++G + + + + ++ + LK GA++ E Sbjct: 232 ESAFTD-------------VKGSRIAVCRTIQWGLAGQGTMSAMEKAVELLKSHGAQVEE 278 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 ISL + + G + G G L Y + + Q++ H Sbjct: 279 ISL---------------GSEFDRVVEWHG-KLGQTEGGTTFLPEYLSAK-----QDL-H 316 Query: 362 RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEEN 421 +IG L A + ++ F +A D +L P+ A P G + Sbjct: 317 DHLIGWVENRQNITHKDQLEAYDGLSALRPKF-DAIASRYDAVLAPSVLDEA-PEGLDNT 374 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF----SVG 477 S + + + + P I++P MP+G+ LI FR+ L +VG Sbjct: 375 GSPILASTWTALHS--------PVINIPGFRGPNNMPVGVSLIAPRFRDRHLLKVGKAVG 426 Query: 478 QIIEKEAGYFR 488 +I E E G+ + Sbjct: 427 RIFEAEGGWIQ 437 >gi|327311241|ref|YP_004338138.1| Amidase [Thermoproteus uzoniensis 768-20] gi|326947720|gb|AEA12826.1| Amidase [Thermoproteus uzoniensis 768-20] Length = 417 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 114/410 (27%), Positives = 186/410 (45%), Gaps = 58/410 (14%) Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + +KD G+ T + P + V + L GA++LGK NM E A+G++N Sbjct: 63 LAVKDNIDVAGLPTTNGAPYAKSV-PGRSAAVVRMLEAEGALVLGKTNMHELALGATNIN 121 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 ++GP +P T SSGGS+ AVA + ++GTDTGGS+R PA+ G VG Sbjct: 122 PHFGPTRNPHDPSRITGG-----SSGGSAGAVAAGVAHIALGTDTGGSVRIPAALCGVVG 176 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYER 255 KP YG G+ AP+LD G++ +TV D A L++ ++G P + Sbjct: 177 YKPAYGSLPTDGVKPLAPTLDHVGLLAKTVSDVAYLMEVLSGVKAE-------PPARFRF 229 Query: 256 ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYY 315 A+ + + DY +DK + + +S L++AG + E+ + ++ Sbjct: 230 AVLRGVAEAD---------DY----VDKAFWRAVSVLEEAGGERFEVEVDARRF------ 270 Query: 316 IISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCY 375 S A A+ LA V +G Y + G++V + +G + + Sbjct: 271 --SYARAAILLAEAAAVNWG-----------YLKSYGQFMGRDVASLLRVGASLPA---- 313 Query: 376 DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFT 435 Y++A +++ K F ++ D + TPTT +A P +E ++ + FT Sbjct: 314 -VAYIKALEVQREAKAYFASLLKR-YDALATPTTAIAA-PRIEEADSIAVRPKLL--AFT 368 Query: 436 VAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 N+ GLPA+SVPA +P+GLQL +E L + E AG Sbjct: 369 ELFNLTGLPAVSVPAP--APGLPVGLQLASS--DDEKLLGIALAYELSAG 414 >gi|84997587|ref|XP_953515.1| glutamyl-tRNA amidotransferase, subunit [Theileria annulata strain Ankara] gi|65304511|emb|CAI76890.1| glutamyl-tRNA amidotransferase, subunit, putative [Theileria annulata] Length = 536 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 204/457 (44%), Gaps = 64/457 (14%) Query: 64 INGDARD---LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 IN RD L G+P+ +KD KGI + + + P + +T L + G +++G Sbjct: 97 INAGERDKMPLFGLPLAVKDNVTVKGIPLKNGATT-GPYMPSFNATAVDSLVNAGIILVG 155 Query: 121 KLNMDEFAMG--SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 K ++ F +G ++N S YG +K+ GGSSGGS AV G +IG+ Sbjct: 156 KTKLNGFGLGANTTNVKSIYG------------EKYIVGGSSGGSGVAVGGNSVTCAIGS 203 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DTGGS+R PA+F +VG +P+ G SR G+ + + D G IT TV ++A L +GY Sbjct: 204 DTGGSVRCPAAFCNSVGYRPSKGLISRFGLNELSANFDTVGFITNTVYEAAYLTYITSGY 263 Query: 239 D------ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYR-----LDYLSPT------- 280 D E D+ + + +I+ + + I KE++ LD L Sbjct: 264 DIKDMLSEYDSNRTKQSILTVLHNFN-TIKSLLLNIIKEFKILVGPLDNLKGLKNVKIGI 322 Query: 281 -----------ID---KTWQQGISWL-KDAGAKIVEISLPHTQYALPAYYIISPAEASSN 325 ID K + ++ + + GA++V++S+P YY+ + + ++N Sbjct: 323 FDAEEICKLGFIDEENKVNMENVARITSELGAEVVKLSIPPLDKLTSIYYLETAKQTTTN 382 Query: 326 LARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKI 385 + R++ Y + + ++ + + ++ R ++G YV S +D L + Sbjct: 383 IRRFNQYPYS-STQINTVTDLI-----LSLEKRIQERFLLGEYVKFSE-FDIETLLKDER 435 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 + K V+ ++P+T + P+ E S ++ + D+F + GL + Sbjct: 436 ENMNKWVEENKLFSEVEFFISPST-SEVLPIRNLEFESKNVYML--DLFLTIAPILGLCS 492 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 +++P L P L + ++ LF V I E+ Sbjct: 493 LALP--LRNSNRPNSLHITAGYLQDHRLFEVSNIFEE 527 >gi|115350940|ref|YP_772779.1| amidase [Burkholderia ambifaria AMMD] gi|115280928|gb|ABI86445.1| Amidase [Burkholderia ambifaria AMMD] Length = 458 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 14/233 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +LDG P ++ +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLDGAPPAQADAVAVARLKRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+ D GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 134 SGLGLNPHFGTPRSPYHRDVPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRIPTQGGVPLSTTLDSFGPIGLTVACCALVDRMLAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P A + ++G+ +G+ Y D + + + L+ AGA + E+ Sbjct: 244 -PHVPAA--RPLEGVRLGVLTNYVTDGVDADVATALDASLKHLEAAGAIVTEV 293 >gi|108803317|ref|YP_643254.1| amidase [Rubrobacter xylanophilus DSM 9941] gi|108764560|gb|ABG03442.1| Amidase [Rubrobacter xylanophilus DSM 9941] Length = 438 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 104/391 (26%), Positives = 171/391 (43%), Gaps = 39/391 (9%) Query: 108 TQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAV 167 +KL + GAV +G+ N F+ + +G ++PW + TPGGSSGG+++AV Sbjct: 67 VRKLREAGAVFVGRSNTPAFSYRWFTDNDLHGRTLNPWDA-----GRTPGGSSGGAASAV 121 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL-------GIISFAPSLDQAGI 220 A + + G D GGSIR PA G GI+PT GR +S L Q G Sbjct: 122 ASGMVPVAHGNDIGGSIRYPAYACGVAGIRPTVGRVPGWYGPVDADEALSVQSMLVQ-GP 180 Query: 221 ITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT 280 + RTV D + L A++G+D D V + L + ++ VG+ ++ + P Sbjct: 181 LARTVEDLRLALDAMSGFDARDPFAVPVLPASANEPLPRPVR---VGLLRDVGVAAPQPA 237 Query: 281 IDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEG 340 +++ WL +AG + E+ LP A +Y++ E Sbjct: 238 VNEALDLAAGWLGEAGYVVEEVELPLLAEAYRLWYLLCMEEF------------------ 279 Query: 341 KDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIR-TLIKRDFTEAFEQ 399 + ++ + E G + Y+ R TLI R +AF Q Sbjct: 280 RLVMPLVEEMGDEGMKRAAATYYAAAKEWWGESPGLEDYMNGYARRGTLIGR--LQAFMQ 337 Query: 400 GVDVILTPTTPTSAFPLGKE-ENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMP 458 ++L P + AF + + + + +A+ + G PAISVP + + +P Sbjct: 338 EYPLVLLPVSAEQAFEYDADIASLQRGLQVVAAQWSMMAIPLLGFPAISVPTGVAD-GLP 396 Query: 459 LGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 +G+QL+G+ FRE+ +F ++IE AG F P Sbjct: 397 VGVQLMGRRFREDAIFDAAEVIEARAGVFAP 427 >gi|312217415|emb|CBX97363.1| hypothetical protein [Leptosphaeria maculans] Length = 635 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 119/248 (47%), Gaps = 27/248 (10%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNS---QMNAYIEV-----VAQKARAAAEESDKR 62 E + L + IS+V++V+SY+Q IE N Q+ A I V V + AR EE + Sbjct: 57 ELSELLNANAISSVQIVESYLQEIELHNRRGRQLRALISVAPRHEVLENARRLDEERARG 116 Query: 63 IINGDARDLEGIPIGIKDCFATK---GIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 I G L GIPI +KD T G+ T S+ G P +TV ++L G +++ Sbjct: 117 KIRGP---LHGIPIVLKDNIMTDESLGMDTTVGSYAFVGCIPKKNATVVERLLKKGMIII 173 Query: 120 GKLNMDEFAMGSSNET------SYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAV 167 GK N+ EF G N + + G SP+ S + PGGSS GS+ AV Sbjct: 174 GKSNLTEFC-GLKNPSMPPGWSAVGGQCQSPYVSRHIAKRKLHWELSAPGGSSTGSAVAV 232 Query: 168 AGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRD 227 A +IGTDT GS+ PA+ +KPT G GI + + + D G + ++ +D Sbjct: 233 AAGFSTLAIGTDTIGSLTTPANRAALYALKPTAGAVPMDGIFNLSKTFDAVGGMAKSAKD 292 Query: 228 SAILLKAI 235 L+ AI Sbjct: 293 LVALMDAI 300 >gi|46409053|dbj|BAD16655.1| allophanate hydrolase homologue [Oleomonas sagaranensis] Length = 600 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 127/466 (27%), Positives = 205/466 (43%), Gaps = 57/466 (12%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEE---SDKRIINGDA----RDLEGIPIGIKDCFA 83 + IE ++NA+ + +R + ++ + K +++ + L GIP +KD Sbjct: 24 LDVIEGVIERLNAWPDPAVWISRFSDDDLRAAAKALVDAGGPSPDKPLWGIPFAVKDNID 83 Query: 84 TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVIS 143 G+ T A + P ++TV +L GA+ +GK N+D+FA G + S YG + Sbjct: 84 CAGLDTTAACPAF-AYTPTQDATVVARLRAAGAIPVGKTNLDQFATGLNGTRSPYG---A 139 Query: 144 PWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC 203 P RS+ + D + GGSS GS+ +V + A S+GTDT GS R PASF VG+KP+ G Sbjct: 140 P-RSVFNAD-YISGGSSSGSAVSVGAGIVAFSLGTDTAGSGRVPASFNNLVGVKPSKGMF 197 Query: 204 SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQG 263 S G++ SLD I T ++ + + A D D +LP + +G Sbjct: 198 SNTGLVPACRSLDCISIFAATAGEADFVRRIAAALDPSDPFSRDLP------DVVLPTEG 251 Query: 264 MTVGIPKEYRLDYLSPTIDKTWQQG-ISWLKDAGAKIVEISLPHTQYALPAYYIISPAEA 322 + VG+P ++ + ++ G I +K G IVEI +P Sbjct: 252 LRVGVPVGAEREFFGDSANEAIYVGAIETMKALGCSIVEIDF-------------APFRE 298 Query: 323 SSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRA 382 ++NL Y G R+ +E + + V+ I+ G + +++ D+ Sbjct: 299 AANL-LYSGPWVAERLAA---VEAFHAAHADAMDPNVR-TIVEGAFGVTA--VDAF---- 347 Query: 383 RKIRTLIK-RDFTEAFEQGVDVILTPTTPTSAFP-----LGKEENNSGSMGHIYNDVFTV 436 R I L R T + VD++L PTTP FP L + +G +T Sbjct: 348 RGIYALEGYRQKTASTWAMVDILLLPTTPL--FPKVSEMLADPIGLNSKLGR-----YTN 400 Query: 437 AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 VN+ I+VPA +P G+ LIG F + L G + K Sbjct: 401 FVNLMDCAGIAVPAGFRPDGLPFGVTLIGPAFSDAALAVWGDRLHK 446 >gi|327286264|ref|XP_003227851.1| PREDICTED: fatty-acid amide hydrolase 2-like [Anolis carolinensis] Length = 566 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 114/496 (22%), Positives = 198/496 (39%), Gaps = 55/496 (11%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING--DARDLE 72 R+R K++S V+++++YI I N +NA + + A A E DK + G D LE Sbjct: 85 RIRRKEVSCVDVIETYIARINEVNPLINAVVRDRFEAALQEAHEVDKLLSEGHDDEEALE 144 Query: 73 ------GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 G+P+ IK+ FA G+ + ++ V +L G + LG N E Sbjct: 145 EKFPFLGVPVTIKEAFALNGLPNTSGLVNRRNIISVSDAVVVSRLKQAGTIPLGVTNCSE 204 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 M + YG +P+ + GGSSGG +A +G D GGSIR Sbjct: 205 LCMWYESSNRVYGRTNNPYDL-----ECIVGGSSGGEGCILAAAGSVIGVGADIGGSIRM 259 Query: 187 PASFTGTVGIKPTYGRCSRLG----IISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 PA F G G KPT G G + + G + R D +L+ +AG Sbjct: 260 PAFFNGIFGHKPTTGVVPNEGQFPNTMGTRSNFLCTGPMCRFAEDLEPMLRVMAG----- 314 Query: 243 ATCVNLPVPDYER-ALDQSIQGMTVGIPKEYRLDY-----LSPTIDKTWQQGISWL---- 292 P+ + LD+++ + K Y +++ +D+ Q + Sbjct: 315 --------PNISKLKLDEAVSLENI---KFYSMEHDGGSVFVCRVDREILQAHRKVAERL 363 Query: 293 -KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 D G ++ +++ +Y+ + ++ A+ S+ L GK + +E + Sbjct: 364 ETDLGVQVQNVAIRDMKYSFQIWSVMMTAKDSTG-KEAPSFTELLGDHGKPVWPSWELVK 422 Query: 352 -SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTT 409 +G I +G + R + ++++ + E G V+L P Sbjct: 423 WMMGLSTHTLPAIALGLTEKIVKYNTRLNCRLTAMAKNLQKEVVDLLGEDG--VLLYPPH 480 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 P L N +M +N +T N+ GLP P L ++ +PLG+Q++ P Sbjct: 481 PV----LAPRHNTPLAMP--FNFAYTAIFNILGLPVTQCPLGLSKEGLPLGIQVVAAPNN 534 Query: 470 EETLFSVGQIIEKEAG 485 + +V + +EK G Sbjct: 535 DHLTLAVARYLEKAFG 550 >gi|50552496|ref|XP_503658.1| YALI0E07271p [Yarrowia lipolytica] gi|49649527|emb|CAG79240.1| YALI0E07271p [Yarrowia lipolytica] Length = 1820 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 112/426 (26%), Positives = 181/426 (42%), Gaps = 60/426 (14%) Query: 65 NGDARDLEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 N ++ L G+P +KD T AC L + P ++T+ + + + G +++GK N Sbjct: 67 NPESLPLYGVPFAVKDNIDVIDFPTTAACPAYL--YIPKEDATMVRLIKEAGGIVVGKTN 124 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 +D+FA G S YG + + +DK GGSS GS++ VA L S+GTDT GS Sbjct: 125 LDQFATGLVGTRSPYGKTPNTF-----SDKHVSGGSSAGSASVVARGLVPFSLGTDTAGS 179 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 R PAS VG+KPT G S G++ SLD I + + D+ ++ A +D+ D Sbjct: 180 GRVPASLNNLVGLKPTVGAFSAKGVVPACKSLDCVSIFSLVLSDAQLVFNIAAHFDKDDC 239 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 P +R L +P+ + D L+P + + + L+ G K+V+ Sbjct: 240 YSRRFP----QRPLKSFGPTPVFAVPETPLWFGDELNPAL---FDDAVERLRQQGVKVVK 292 Query: 302 ISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKD-------ILEMYEN-TRS 352 I P A Y E RY ++ ++ +D I++ EN T + Sbjct: 293 IDFTPLFDLAKCLY------EGPWVAERYAAIKDFVQNRKEDMDETVYGIVKQAENFTAA 346 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 F E K R ++ RKI + +D ++ PT P Sbjct: 347 DAFAYEYKRRAIV-----------------RKIEEIF---------SSIDGLIVPTCPL- 379 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP + + + +T VN+A L A+++P + P G+ LI Q F + Sbjct: 380 -FPTMESVAKEPVTVNAHQGTYTNFVNLADLSALAIPVGFRKDGFPFGITLISQKFNDYA 438 Query: 473 LFSVGQ 478 L + Q Sbjct: 439 LLDMAQ 444 >gi|313235311|emb|CBY10875.1| unnamed protein product [Oikopleura dioica] Length = 371 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 22/347 (6%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD-LEGIP 75 +S S +++ + ++ ++ N+++N E + RA A S R G A L+G+P Sbjct: 32 KSGKFSPIDIAEQLLKDLQILNAKLNMICEYFPDQVRAQARASAARYAEGKALGPLDGVP 91 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGS--SN 133 I +KD +G + + + T+T + G +++G NM M SN Sbjct: 92 IAMKDQLDIEGHRRRNGLEFCESGAAVEDCTITARCRAQGMIIVGVTNMHPKGMSCFGSN 151 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ++ +G +P+ DKF G SS G+ A VA + ++GTD GGS+R PA + Sbjct: 152 ISADHGMCRNPF-----NDKFYCGASSSGAGAIVASGIMPLAVGTDGGGSVRIPAGYCNL 206 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+ P+ GR + G S S AG + T +D A L +AG D + + P+ Sbjct: 207 VGLFPSIGRVPQRGTSSGTCS--AAGPMAHTPQDCARLYAVMAGTDYQVGSEQSRIQPEV 264 Query: 254 E--RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYAL 311 + L +S+ G+ VGI + + + + +Q+ ++W+ D GA+IV +P Sbjct: 265 TIPKTLLKSLVGLKVGIDQSWNQAGVPDALFNPFQKRLNWMIDQGAEIVHFIMPEKDVVY 324 Query: 312 PAYYIISPAEASSNLARYDGVRYGLRVEGKDI---LEMYENTRSIGF 355 A+ + E +S++ RY + +GK + +EM N + F Sbjct: 325 AAHLMCFSNEIASDVIRY-------QQQGKQVDYDVEMISNIQVQTF 364 >gi|255262797|ref|ZP_05342139.1| amidase [Thalassiobium sp. R2A62] gi|255105132|gb|EET47806.1| amidase [Thalassiobium sp. R2A62] Length = 442 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 113/438 (25%), Positives = 184/438 (42%), Gaps = 47/438 (10%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR--DLEG 73 + + +I V+L + Y+ AI+ Y VVA + + R L+G Sbjct: 16 IEAGEIDPVDLCEVYLAAIDAHEMTPRIYT-VVAHDRARTEAAAASARAKTEQRLGPLDG 74 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P+ KD F + GI T A I P ++ V + G V LGK ++ E A Sbjct: 75 VPVSWKDLFDSAGIVTAAGCRIYADRVPEADAEVLRVATGMGLVCLGKTHLSELAFSGLG 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 P+ ++ D GGSS G++ +VA L AA++G+DTGGS+R PA + Sbjct: 135 ----LNPMTETSLCVNDHDAVA-GGSSSGAATSVAFGLAAAAVGSDTGGSVRIPACWNDL 189 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253 VG+K T GR S G PS D G + RTV D+A++L AI + VPD Sbjct: 190 VGLKTTIGRVSVAGAAPLCPSFDTVGPLCRTVEDAALMLAAIE----------DSAVPDL 239 Query: 254 ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPA 313 + A ++ G+ + + ++ L ++ ++ L+ AGA + ++P A Sbjct: 240 QGA---TLDGVRLMVLDTIVMEDLDAKPAAAFEAAVAKLQAAGAVVERRAVPDLG---DA 293 Query: 314 YYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSR 373 + + P + A Y E E FG E+ RI+ G V + Sbjct: 294 FTLGGPMYVAEAYAEY--------------AEFVEERPDEMFG-EIVVRIIAGKSVSA-- 336 Query: 374 CYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG--SMGHIYN 431 YLR K +K + E G D ++ P++ + + N+ ++ Sbjct: 337 ---FEYLRGAKAIERVKAQYAE-VSAGFDAVIMPSSAIMPPNISRLLNDDAYYKRANLLA 392 Query: 432 DVFTVAVNMAGLPAISVP 449 T N+ GL +IS+P Sbjct: 393 LRNTRVGNLMGLCSISLP 410 >gi|67525795|ref|XP_660959.1| hypothetical protein AN3355.2 [Aspergillus nidulans FGSC A4] gi|40744143|gb|EAA63323.1| hypothetical protein AN3355.2 [Aspergillus nidulans FGSC A4] gi|259485666|tpe|CBF82881.1| TPA: amidase, putative (AFU_orthologue; AFUA_5G09140) [Aspergillus nidulans FGSC A4] Length = 682 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 108/412 (26%), Positives = 179/412 (43%), Gaps = 50/412 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G I +KD A KG+ + ++ G+ P ++TV ++ + GAV+ GK + Sbjct: 103 LAGRTIVLKDNIAVKGVPMLMGTDMVSGYIPDTDATVVTRVLEAGAVVKGKAVCENLCHS 162 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 +++ ++ G V +P+ S+ SS G + VA +IG D GGS+R PA + Sbjct: 163 ATSSSAATGSVHNPFARGYSSGG-----SSSGCGSLVANGDVDLAIGADQGGSVRVPAGW 217 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP- 249 G G+KPT+G G S P+ D G +TRT+ D+A+LL+A AG D D P Sbjct: 218 CGLYGLKPTFGLMPYTGCGSNEPTNDHLGPMTRTLLDNALLLQATAGNDNIDDRSFAAPL 277 Query: 250 ---VPDYERALD-----QSIQGMTVGIPKE-YRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 +P+Y L + + G+ +G+ E + + P + KT + IS + GA + Sbjct: 278 PSQIPEYYSILTSLPNPKFLSGVKIGVISEGMNMPGIDPRVHKTVSKAISLFTELGATVS 337 Query: 301 EISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEM------------- 346 ++S+P H++ A I +P S N +G R L Sbjct: 338 DVSVPFHSRGA----AIWTPISKSGNFHSRMNRAFGRRGHALTDLNTLFHPLTQEKWDRA 393 Query: 347 YENTRSI----GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD 402 Y +T++I + + I+ LS R D + R+ L+ + VD Sbjct: 394 YTSTKNIYLNGAYAETQFPGILSKAMNLSRRLRDEYDAALREYDVLVLPNLPYIANSHVD 453 Query: 403 VILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 P +A PL E + +G N T N +G P +++P + E Sbjct: 454 -------PATATPL---EMIAKQVGLTAN---TAPFNQSGHPVLAMPVGMLE 492 >gi|187927611|ref|YP_001898098.1| amidase [Ralstonia pickettii 12J] gi|187724501|gb|ACD25666.1| Amidase [Ralstonia pickettii 12J] Length = 452 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 112/240 (46%), Gaps = 22/240 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P+ IKD F G T A S L D R ++ +L GAV+LG+ NM EFA Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALADQPRATTDAAAVARLRAAGAVLLGRTNMSEFAF 132 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +P + GGS+ G + VAG + A++GTDTGGSIR P++ Sbjct: 133 SGLGLNPHYGTPRTPADGARAA-----GGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI---LLKAIAGYDECDATCV 246 F G KPT R G + + SLD G + +V AI +L +G D D T V Sbjct: 188 FCNLTGFKPTARRVPMTGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGESGNDAFDTTAV 247 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 L G+ GI +++ L T+ +++ + L+ AGA IV P Sbjct: 248 PL-------------AGLRFGITQDFVGADLDNTVAVAFERAVERLERAGAHIVRFEFPE 294 >gi|296284619|ref|ZP_06862617.1| amidase family protein [Citromicrobium bathyomarinum JL354] Length = 528 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 13/242 (5%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 I+ ++++ +NA I A A ++ R LEG + +KD T+ T Sbjct: 52 IRTLDDAGPMLNAVIAFNPDAAAVAVTMTE--------RPLEGRTVLVKDNIETREFATT 103 Query: 91 ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYYGPVISPWRSMD 149 A S L G ++ + L + G V+LGK N+ E+A + N TS + V R+ Sbjct: 104 AGSLALAGNMTRRDAPLIANLREAGGVVLGKTNLSEWANIRDFNSTSGWSAVGGLTRNPH 163 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 + D+ T GSS GS+ AVA A+IGT+T GSI PAS G VG KPT G SR ++ Sbjct: 164 AIDRNT-CGSSSGSAVAVAAGFAWAAIGTETNGSITCPASINGVVGFKPTVGLVSRTHVV 222 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP--VPDYERAL-DQSIQGMTV 266 + + D AG + R+V D+A+LL AIAG D D D+ L D S+ G+ + Sbjct: 223 PISSTQDTAGPMARSVTDAAVLLTAIAGSDPADPATAEADRYKRDFAEGLPDASLAGVRI 282 Query: 267 GI 268 G+ Sbjct: 283 GV 284 >gi|323358296|ref|YP_004224692.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] gi|323274667|dbj|BAJ74812.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium testaceum StLB037] Length = 566 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 131/528 (24%), Positives = 214/528 (40%), Gaps = 74/528 (14%) Query: 24 VELVDSYIQAI-----ENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGIPIG 77 VEL+D+++ I +S +++NA + V+ ARA AE SD R G AR L+GIP Sbjct: 24 VELLDAHLARIAAYDAPDSATKLNAVV-VLNPDARAEAEASDARRAVGQARGPLDGIPYT 82 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD + +G+ + S ++ ++L + GA+ LG+ NM A G + Sbjct: 83 AKDSYLVRGLTAASGSPAFADLVARSDAFTIERLREAGAICLGRTNMPPMANGGM-QRGL 141 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 YG SP+ + T F GSS GS A A +G +T S R PAS G Sbjct: 142 YGRAESPYNADYLTSAFA-SGSSNGSGTATAASFGVFGLGEETWSSGRAPASCNGLCAYT 200 Query: 198 PTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD-------ATCVNLPV 250 P+ G S G P++D TR++ D +L+ + D V LP Sbjct: 201 PSRGVISVRGNWPLVPTMDVVVPHTRSMADLLAVLEVVVADDPETRGDFWRAQPWVPLPA 260 Query: 251 PDYER-------ALDQSIQGMTVGIPKEYR-LDYLS------------------PTIDKT 284 R A D ++ G +GIP+ + D L+ P++ Sbjct: 261 ASEVRPESYSALAADATLVGKRIGIPRLFLGTDPLAGTGPKGVGGPTGERIEPRPSVLAL 320 Query: 285 WQQGISWLKDAGAKIVEISLPHTQY---------ALPAYYIISP-----------AEASS 324 W+ + L+ AGA +VE P + ++SP A A Sbjct: 321 WEAARADLEAAGAIVVETDFPLVSNYEGDRPGAPTISTRGLVSPEFLHSEIVDLSAWAWD 380 Query: 325 NLARYDGVRYGLRVEGKDILEMYENT---RSIGFGQEVK-HRIMIGTYVLSSRCYDSHYL 380 + R +G V+G +I E R GF ++ + + + + + H Sbjct: 381 DFLRANGHPGLAVVDGAEIFPHPEGALPDRYTGFDDDIALYPAHVREHPVEAFTEIPHLE 440 Query: 381 RA-RKIRTLIKRDFTEAFE-QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAV 438 R + +RD E + +G+D ++ PT T P + N + + N V+ Sbjct: 441 EGLRGLEETRRRDLEEWMDAEGLDALVFPTQ-TDIAPADADVNPAAADIAWRNGVWVSTG 499 Query: 439 NMA----GLPAISVP-AALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 N+A G+P ++VP L + MP+GL G+ + + +L + E Sbjct: 500 NLAIRHCGVPTVTVPMGTLDDIGMPVGLTFAGRAYDDTSLLQLAVAFE 547 >gi|169621007|ref|XP_001803914.1| hypothetical protein SNOG_13707 [Phaeosphaeria nodorum SN15] gi|160704155|gb|EAT78731.2| hypothetical protein SNOG_13707 [Phaeosphaeria nodorum SN15] Length = 637 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 38/295 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNS---QMNAYIEVVAQKA--RAAAEESDKRIINGDARD 70 + ++ IS+VE+V+ Y+ I+ N Q+ A I V + + A + D+R+ Sbjct: 64 MNAQAISSVEIVELYLHQIDEHNRRGRQLRALISVAPRHELLKIAKKLDDERLRGKVRGP 123 Query: 71 LEGIPIGIKDCFATK---GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEF 127 L GIPI +KD T+ G+ T S+ G +P +T+ +L G +++GK N+ EF Sbjct: 124 LHGIPIVVKDNIMTEEQLGMDTTVGSYAFVGCKPKKNATIVDRLIKRGVIIIGKANLTEF 183 Query: 128 AMGSSNET------SYYGPVISPWRSMDSTDK------FTPGGSSGGSSAAVAGFLCAAS 175 G N + + G SP+ S + PGGSS GS+ AVA + Sbjct: 184 C-GLKNPSMPPGWSAVGGQCQSPYVSRHIAKRKLHWELSAPGGSSTGSAVAVASGFSTLA 242 Query: 176 IGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAI 235 IGTDT GS+ PA+ +KPT G+ GI + + + D G + ++ +D L+ A+ Sbjct: 243 IGTDTIGSLITPANRAALYALKPTVGQVPMDGIFNLSKTFDAVGGMAKSAKDLVALMDAM 302 Query: 236 AGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY---RLDYLSPTIDKTWQQ 287 VP R D+ + I + R+ ++ PTI KTW++ Sbjct: 303 M-------------VPT-SRESDEVAPHRSFKIKSNFGKLRIGFVEPTIWKTWRK 343 >gi|195498986|ref|XP_002096757.1| GE25848 [Drosophila yakuba] gi|194182858|gb|EDW96469.1| GE25848 [Drosophila yakuba] Length = 536 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 134/524 (25%), Positives = 223/524 (42%), Gaps = 73/524 (13%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 S L ++V E R RL+S+ +++ ELV +YI+ IE+ N +NA +E A A E+D Sbjct: 42 SRLLTLSVQELRRRLQSRQLTSAELVRTYIERIESVNKHLNALVESRFTAALEEAIETDD 101 Query: 62 RIINGDA----------RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKL 111 I + + R L G+P+ IK+ A +G+ S + + ++L Sbjct: 102 LIASCQSAADVEKLFAERPLLGLPVTIKESCALEGMSFAVGSLSRKNIKAKADGEAVKRL 161 Query: 112 WDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD-STDKFTPGGSSGGSSAAVAGF 170 GA+ L E+ +T G ++P+ S GS G+ A++ G Sbjct: 162 KIAGAIPLLVSATPEYCFSIETDTLLNGKCLNPYDSERIPGGSSGGEGSLNGAGASLFG- 220 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII--SFAPSLDQ---AGIITRTV 225 IG+D GGSIR P+ + G G KP+ G S G S P++ G I+R Sbjct: 221 -----IGSDIGGSIRIPSLYCGIFGHKPSGGVFSAKGHFPNSSDPNIGHYFVEGPISRFA 275 Query: 226 RDSAILLKAIAGYDECDATCVNLPVP----DYERALD-QSIQG-MTVGIPKEYRLDYLSP 279 D + LL+ +AG + ++ PV + AL + I G M V + K+ R + Sbjct: 276 EDLSELLQVMAGKENASKLRLDEPVQLNQIKVQYALGFEGINGWMHVAVDKDIRNSICNA 335 Query: 280 TIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE 339 T + LK G + + LP+ ++ A S +A D + Y L E Sbjct: 336 T---------THLKSLGLDVKKAKLPNLDNSMEM--------ALSGIAGQDLMDYLLPDE 378 Query: 340 -----GKDILEMYENTRSIGFGQE------VKHRIMIGTYVLSSRCYDSHYLRARKIRTL 388 GK ++E +S+ GQ + +M T S+ + Y+ + Sbjct: 379 NPEGSGKVRETLWEIVKSLR-GQSNYTTNALIFELMRRTGAFMSKSKLNQYM-------M 430 Query: 389 IKRDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 R+ FE + V+L PT A + S+ ++ +T+ N+ GLP Sbjct: 431 ESRELIGEFENLLGDNGVLLFPTLNLPA------PRHKWSILSLWGVDYTLMFNVLGLPV 484 Query: 446 ISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 VP L E+ +P+GL +IG P ++ V +E+ G ++P Sbjct: 485 THVPMGLNERGLPIGLSVIGAPNQDRLCLRVALELERAFGGWKP 528 >gi|195453756|ref|XP_002073928.1| GK14375 [Drosophila willistoni] gi|194170013|gb|EDW84914.1| GK14375 [Drosophila willistoni] Length = 534 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 123/506 (24%), Positives = 206/506 (40%), Gaps = 66/506 (13%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 +V E LR IS+V+LV++YI + N +NA IE A A+ +D I Sbjct: 45 SVIELSTELRRGVISSVDLVEAYIARVREVNPSLNAVIEERFDAALKDAKLADDLIARAS 104 Query: 68 AR----------DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 ++ + GIP +K+ + KG+ S I + + V + L G + Sbjct: 105 SQYDRVALYTRYPILGIPFTVKESCSVKGLSYTVGSVIRKNMKAPKDGDVVELLRAAGGI 164 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 L + EF M + +G ++P+ ++ T GSSGG +A +G Sbjct: 165 PLLVSSNPEFCMSFETNSVLHGRCVNPY-DLNRTS----AGSSGGEAALNGSGASPFGVG 219 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAP------SLDQAGIITRTVRDSAIL 231 +D GSIR P+ F G G KPT G S G ++ SL Q G ITR RD +L Sbjct: 220 SDISGSIRLPSMFCGVFGHKPTGGLTSVKGHFPYSSIDENFNSLLQIGPITRFARDLPLL 279 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEY---RLDYLS-PTID----K 283 L+ +AG ++ + +++ ++ + I Y R +Y++ P++D Sbjct: 280 LEIMAGGNK------------EKLKMEEPLELKDIKIYYAYGYSRFNYITHPSVDFDIKM 327 Query: 284 TWQQGISWLKDAGAKIVEISLPH--TQYALPAYYIIS----PAEASSNLARYDGVRYGLR 337 + + + + AG + E+ L + L ++ P+ + R +R Sbjct: 328 SITKAVKCFEKAGLQTKELDLQFLSNSFELALVGLLDLKGLPSVVTQQAHRQPSMRL--- 384 Query: 338 VEGKDILEMYENTRSIGFGQEVKHRIMIGTYV-LSSRCYDSHYLRARKIRTLIKRDFTEA 396 I+E + + IG K I + L++ + + R+ IK Sbjct: 385 ----LIIEQFNSI--IGHSLFTKESIFLELMQRLNALMATGNMQQYREETKQIKEHMINL 438 Query: 397 F-EQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEK 455 E G V+ PT TSA N M + V N+ GLPA V L + Sbjct: 439 LGENG--VLFMPTFHTSALCFNTSLVNVPGMDSL------VLFNILGLPATHVTMGLNSR 490 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIE 481 MP+G Q+I PF+++ + +E Sbjct: 491 GMPIGFQVIAAPFKDKLCLKIAMELE 516 >gi|26989651|ref|NP_745076.1| amidase [Pseudomonas putida KT2440] gi|24984537|gb|AAN68540.1|AE016486_3 amidase family protein [Pseudomonas putida KT2440] Length = 567 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 138/557 (24%), Positives = 220/557 (39%), Gaps = 82/557 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIE-----NSNSQMNAYIEVVAQKARAA 55 M E+ ++++E RD L + +AVELV +Y+ I+ ++ + +NA + V +A Sbjct: 1 MIEVTEVSIAELRDALETGRTTAVELVKAYLARIDAYDGADTATALNAVV-VRNPEALKE 59 Query: 56 AEESDKRIINGDA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN 114 AE SD R G L+GIP KD + KG+ + S ++ ++L Sbjct: 60 AEASDARRAKGQVLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAA 119 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GAV LGK NM A G + YG SP+ + T F GSS G+ A A A Sbjct: 120 GAVCLGKTNMPPMANGGM-QRGVYGRAESPYNADYLTAPFA-SGSSNGAGTATAASFSAF 177 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 + +T S R PAS G P+ G S G P++D RT+ D +L Sbjct: 178 GLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEILDV 237 Query: 235 IAGYDECD---------------ATCVNLPVPDYERALDQS-IQGMTVGIPKEY------ 272 + D+ D A P E A+D S ++G G+P+ Y Sbjct: 238 VVA-DDADKRGDLWRLQPWVPIPAASTVRPASYLELAVDASALKGKRFGVPRMYINADPE 296 Query: 273 ---------------RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT------QYAL 311 R++ + ID WQQ L+ AGA+++E+ P + Sbjct: 297 AGTAEKPGIGGPTGQRINTRATVID-LWQQARQALEAAGAEVLEVDFPLVSNCEGDRPGA 355 Query: 312 PAYY---IISPAEASSNLARYDGVRYG-----------LRVEGKDILEMYENTRSIGFGQ 357 P Y I+S A L G + R+ D L+++ + + Sbjct: 356 PTVYNRGIVSKAFLHDELWELSGWAFDDFLRANDDPKLNRLADVDGLKIFPHDPGTLPNR 415 Query: 358 EVKHRIMIGTYVLSS----RCYDSHYLRARKIRTL---IKRDFTEAFEQ-GVDVILTPTT 409 E + YV + + +D +R L K D + ++ G+D +L PT Sbjct: 416 EDDLAAGMDEYVNMAKRGLKTWDQIETLPDGLRGLEQTRKLDLEDWMDKLGLDAVLFPTV 475 Query: 410 PTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA----GLPAISVP-AALCEKKMPLGLQLI 464 P + N + N V+ N+A G+P ++VP + + MP+GL Sbjct: 476 -ADVGPADADINPVSADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFA 534 Query: 465 GQPFREETLFSVGQIIE 481 G+ + + L S E Sbjct: 535 GKAYSDNALLSFAAAFE 551 >gi|124267169|ref|YP_001021173.1| amidase [Methylibium petroleiphilum PM1] gi|124259944|gb|ABM94938.1| Amidase [Methylibium petroleiphilum PM1] Length = 453 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/417 (26%), Positives = 180/417 (43%), Gaps = 45/417 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ + IKD F G T A S +L P + + +L GA ++G+ +M EFA Sbjct: 67 LAGLAVSIKDLFDIAGQVTTAGSTVLTDAEPAAQDAPAVSRLRAAGAALIGRTHMTEFAF 126 Query: 130 -GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G Y P P ++D PGGSS G++ +VA A++G+DTGGS+R PA Sbjct: 127 SGVGLNPHYPAPANVPMATLDRDTPRIPGGSSSGAAVSVASGAAWAALGSDTGGSVRIPA 186 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 + G VG K T G I + +LD +TR+VRD+ +L ++ A V L Sbjct: 187 ALQGLVGFKNTASLTPTEGAIPLSTTLDTVSALTRSVRDAVLL------HELLSARRVAL 240 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P + ++ + +P LD L P + +++ + L AGA+IV + +P Sbjct: 241 P--------GRPLRATRLAVPTTLMLDALEPAVAAAFERAVDRLSRAGAQIVTLDVP--- 289 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 ++P + + A + + + L +E + + V RI G Sbjct: 290 ----PLADLAPLQVNGGFASCESWAWH-----RHRLATHEAD----YDRRVVTRIRRGMA 336 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + ++ D RA I + A +G D L+PT P A P+ E + Sbjct: 337 MSAADYIDLQKARAAWIARM------HAALRGFDAALSPTVPILAPPIAALEASDEEFFR 390 Query: 429 IYNDVF--TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIE 481 + + + VN+ AIS+P C+ P+GL L + ++ L + +E Sbjct: 391 VNSLLLRNPSVVNLLDGCAISLP---CQAPGDAPVGLMLWSRGHADDALLDMALAVE 444 >gi|295703180|ref|YP_003596255.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium DSM 319] gi|294800839|gb|ADF37905.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium DSM 319] Length = 399 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 106/420 (25%), Positives = 191/420 (45%), Gaps = 76/420 (18%) Query: 71 LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYE-STVTQKLWDNGAVMLGKLNMDEFA 128 L + +KD F +G I + L +P E + V L GA + G + DE Sbjct: 23 LNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAALKGVTHTDELM 82 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 G + E ++YG ++P S D+ PGGSS GS+ AVA + +IGTDTGGS+R P+ Sbjct: 83 YGLNGENAHYGTPVNP----KSADRI-PGGSSSGSAVAVAAGITDFAIGTDTGGSVRIPS 137 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR----TVRDSAILLKA---IAGYDEC 241 S+ G G +P++GR S G+I APS D G++ R + A+LL + ++G+ Sbjct: 138 SYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGAVLLNSTSRVSGF--- 194 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 T + +P E +QS++ L+P+I+ + ++ + I E Sbjct: 195 --TRLYVPTDVMELVDEQSMRA-------------LAPSINH--------VMESFSTIEE 231 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY------ENTRSIGF 355 I+ I+P S+ + + ++GK+I + + EN F Sbjct: 232 IA-------------IAPQGFSTYMETFR------LLQGKEIWQTHGEWIQKENPM---F 269 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 G+++ R + + + +Y+ ++ R L +++ E+G +++ PT P A P Sbjct: 270 GEDIGSRFQ---WASTLTLLNMNYIEEKR-RELRYFMYSQLGEEG--ILILPTAPGPA-P 322 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + + T ++GLP +++PA + +P+GL I ++E L + Sbjct: 323 VKDAKGPELENRRLRTLQMTFIAGLSGLPQVTIPAGELD-GLPVGLSFIAGYNQDEKLLN 381 >gi|299530435|ref|ZP_07043856.1| amidase [Comamonas testosteroni S44] gi|298721575|gb|EFI62511.1| amidase [Comamonas testosteroni S44] Length = 467 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/499 (24%), Positives = 207/499 (41%), Gaps = 44/499 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 EL M +E R+ ++S VE V+S + I N +NA ++ +A A +D R Sbjct: 2 ELWQMDAAELAARIARCEVSCVESVESCLDRISKVNPLLNAIVDADDAQALEEARAADVR 61 Query: 63 IINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 + G+A L G+P+ IK +G T +S V L GA+ +G+ Sbjct: 62 LARGEALGPLHGVPVTIKVNADQRGFATTNGIPANRDLVADADSAVVANLRRAGAIPIGR 121 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N F+M + +G ++P + TPGGSSGG++ AVA + + G D G Sbjct: 122 TNTPAFSMRWFTDNDLHGRTLNPHNA-----DLTPGGSSGGAAVAVAAGMGPIAHGNDVG 176 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLG-------IISFAPSLDQAGIITRTVRDSAILLKA 234 GSIR PA G G++PT GR ISF + Q G + R+V D + L+A Sbjct: 177 GSIRYPAYACGVYGLRPTVGRVPAFNPASTVERPISFFLNSVQ-GPLARSVADIRLALQA 235 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 ++ D D V PV + + YR +P +++ ++ L D Sbjct: 236 MSTRDVRDPQWV--PVAPAGVGISAPCRVALCLEAPGYR---AAPAVEQALRRAAQMLAD 290 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 AG +VE + P + A A+ ++ E L D V ++ Sbjct: 291 AGYDVVEAAPPRLREAADAWLQLTTHEVDEMLG--DAV-------------ATSGDSAVQ 335 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 H ++ G + YLR + +R ++R++ F Q ++L P + + F Sbjct: 336 LAHAAMHALVPGLGM-------KDYLRMQGLRVALQREWA-VFLQRYPLLLCPVSWQTPF 387 Query: 415 PLGKEENNSGSMGHIYN-DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 + + + M + + ++ + LP ++VP L P G+QL+ F EE Sbjct: 388 AVDGDLKGAEVMRTLVDAQSMLLSTAILALPGLTVPMGLAPTG-PTGVQLVAGRFEEERC 446 Query: 474 FSVGQIIEKEAGYFRPHKW 492 + IE+ G +W Sbjct: 447 LGAAEQIERRRGPVAVSRW 465 >gi|49481699|ref|YP_036093.1| amidase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49333255|gb|AAT63901.1| glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit A (glutamyl-tRNA(Gln) amidotransferase, subunit A) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 536 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 15/204 (7%) Query: 70 DLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA 128 +L GIP+ +KD T K + T A +++L + ++T+ ++L ++GA +LGK NM E+A Sbjct: 136 NLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEDGAFVLGKANMSEWA 195 Query: 129 -----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 S + G ++P+ + F GSS GS+ V ++GT+T GS Sbjct: 196 NYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTETTGS 251 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 I PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L A+ GYDE D Sbjct: 252 IVAPAAQQSVVGLRPSLGLVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYDEKD- 310 Query: 244 TCVNLPVPDYER---ALDQSIQGM 264 + V D ER D SI G+ Sbjct: 311 -VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|169623718|ref|XP_001805266.1| hypothetical protein SNOG_15102 [Phaeosphaeria nodorum SN15] gi|160705035|gb|EAT77645.2| hypothetical protein SNOG_15102 [Phaeosphaeria nodorum SN15] Length = 688 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 140/546 (25%), Positives = 217/546 (39%), Gaps = 84/546 (15%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 +A + S + S +++A LV I + ++ +NA + VV + A A+ SD R G Sbjct: 34 LAAALSHGQTNSVELTAKHLV--RIAKYDRRSTNLNA-VPVVNEHAFYVAQASDDRRAKG 90 Query: 67 DARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 A + L+GIP IKD + +G+ + S + ++ +K+ + GAV+LG+ NM Sbjct: 91 KAVNTLDGIPCTIKDSYKIEGMTVASGSPAFQNLIANEDAFTVRKIREAGAVILGRTNMP 150 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 A G + YG SP+ + T F GSS GS+ A A +G +T S R Sbjct: 151 PMAAGGM-QRGVYGRAESPYNAEYLTAAFA-SGSSNGSATATASSFGVFGMGEETISSGR 208 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE---CD 242 PAS G V P+ G S G P+ D TRTV D LL I D+ CD Sbjct: 209 SPASNNGLVAYTPSRGLISIRGNWPLFPTCDTVVPHTRTVDDMFALLDVIVAKDDETACD 268 Query: 243 ----ATCVNLPVPDYERALD-------QSIQGMTVGIPKEY----------RLDYLSPTI 281 V LP D R +S+ G +G+PK Y R + ++ Sbjct: 269 FWRAQPFVKLPEVDTIRPKSYHSLSEAKSLLGKKIGVPKMYIGGTDSDPTARKVHTRQSV 328 Query: 282 DKTWQQGISWLKDAGAKIVEISLP-HTQYALP---------------------------- 312 WQ L+ AGA ++E+ P T++ P Sbjct: 329 IVLWQNARKVLESAGATVIEVDFPVVTKFEAPDSSRNDGLVEESTAPPHHNEIDMCRLMA 388 Query: 313 -AYYIISPAEASSNLA----RYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG- 366 A+ A A SNLA + D R +G + + Y++ + +V I G Sbjct: 389 YAWDDFLAANADSNLATSLSQIDSASIFPRPQGS-VPDKYDSNDPLVRHTDVVAHITPGR 447 Query: 367 --TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE---N 421 TY + + L A + T D+ E G+D ++ P +G+ + N Sbjct: 448 PDTYSIPNLGPALRNLEAMRKATF--EDWL--VELGLDAVVWPCNGD----VGRADADIN 499 Query: 422 NSGSMGHIYNDVF----TVAVNMAGLPAISVPAALCEK-KMPLGLQLIGQPFREETLFSV 476 + N V A+ G+P ISVP + + MP+ L G+ + + L Sbjct: 500 EHSAADAWRNGVLYSNGNCAIRQLGIPTISVPMGVMKDIDMPVNLTFAGRAYADSELLQY 559 Query: 477 GQIIEK 482 EK Sbjct: 560 AYAFEK 565 >gi|317125944|ref|YP_004100056.1| amidase [Intrasporangium calvum DSM 43043] gi|315590032|gb|ADU49329.1| Amidase [Intrasporangium calvum DSM 43043] Length = 475 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 127/496 (25%), Positives = 209/496 (42%), Gaps = 48/496 (9%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE--E 58 M +L +E LR+ ++S E++D+ + ++ +NA AR AA+ E Sbjct: 5 MPDLIRSTATEVVALLRAGEVSPTEVLDALEAHVTATDPVVNALPIRFFDAARVAAQRLE 64 Query: 59 SDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 D+ G L G+P+ +KD G T S I + ++L +G V Sbjct: 65 RDRPTPTGRGW-LAGLPVAVKDYNDVGGQLTTNGSPINRHHVAAESDAMVRRLESHGGVP 123 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 K N+ EFA G ++ T +G +PW + T GGSSGGS+AA+A + G Sbjct: 124 YAKTNVPEFAGGHTDNT-VWGATRNPWDT-----GRTAGGSSGGSAAALASGSAWLATGN 177 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 D GGS+R PA + G VG++PT G R +L G + R V D A++L A+AG Sbjct: 178 DLGGSLRTPAGYNGVVGVRPTPGLVPRKQPPVPFDALWVEGPMARNVADVALMLDALAGP 237 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D P + L++ +P R+ Y SP + G+ + + Sbjct: 238 DRHDPLTHEPPARSFVERLEE--------LPPRLRVAY-SPDL------GLLPVDRGVRE 282 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDIL-----EMYENTRSI 353 + E +L H + AE +S + G + +L + E R Sbjct: 283 VTEGALHH--------FASLGAEVTSACPDFTGAHDAFQALRAQLLATINGHLLETDR-- 332 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 +K I+ + ++ + R LI R T F D+++ P+ Sbjct: 333 ---DRIKDDIVWNIELGLTQPLTAVQAAERSRGELIHR--TMDFFADHDLLVVPSAQLDP 387 Query: 414 FPLG--KEENNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 FP+G + G+ H Y D T + + P +++P + +P+GLQL+G+P Sbjct: 388 FPVGWTWPRDIDGTEQHTYVDWIAITFLITLTACPVVALPCGFSAEGLPVGLQLVGRPGS 447 Query: 470 EETLFSVGQIIEKEAG 485 E L +V +E+ G Sbjct: 448 ESELLAVAAGLERSVG 463 >gi|302499824|ref|XP_003011907.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Arthroderma benhamiae CBS 112371] gi|291175461|gb|EFE31267.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative [Arthroderma benhamiae CBS 112371] Length = 604 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 114/483 (23%), Positives = 208/483 (43%), Gaps = 44/483 (9%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK----ARAAAEESD 60 ++ ++ R+ ++ ++ +V++ + I S + +Q RAAAE S Sbjct: 114 DYYTSADYRELYKAGKLTPTAVVEALLPVIRRDTSPPGEFSAGFSQSKIDLVRAAAEAST 173 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R NG ++GIP+ IKD G S + P + S +K + GA+++ Sbjct: 174 QRWANGTPLGPMDGIPVAIKDEVDIDGYDKYLSSKVDFTANPSFTSWCVKKWEEAGAIVI 233 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK M E + ++N G +P T SSGGS AV + ++G D Sbjct: 234 GKTVMHEIGLDTTNNNPVVGTPKNPHNPGYYTGG-----SSGGSGYAVGAGVVPLALGAD 288 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 GGSIR P+++ G G+K T+GR S A ++ G + + D A+ + ++ D Sbjct: 289 GGGSIRIPSNYCGIYGLKTTHGRVSAAPTRRLATTVGVFGPMASNIDDLAMGYRIMSAPD 348 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD-AGAK 298 + P P S +G +G+ K++ ++ P + + + I + +D G + Sbjct: 349 PSNPVSAAFPDPLLSIPPSSSSRGKVIGVYKDW-VERSDPDVLAMFNKAIDYYRDEQGYQ 407 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 IV+I++P+ + + E SS L + + I ++ TR I Sbjct: 408 IVDITIPYIPEGGKCHALSILNEISSGLTK------------EQISQLSAPTRII----- 450 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL-TPTTPTSAFPLG 417 + +G ++ Y ++++R L+ + F++ +I+ TPTTPT+ + Sbjct: 451 ----VSVG----GTQGLAQDYFASQRMRHLLMNHLSFLFQKYPGIIIATPTTPTAGSKIS 502 Query: 418 KEENN-----SGSMGHIYNDVFTVAVNMAGLPAISVPAAL-CEKKMPLGLQLIGQPFREE 471 E + S S + + + N G PAIS P E +P+GL +G+ EE Sbjct: 503 GGEADLTNGISDSNATLRSMEYVYLANFTGCPAISCPMGYDDEPSVPVGLMGMGEWGSEE 562 Query: 472 TLF 474 L Sbjct: 563 ALM 565 >gi|325980924|ref|YP_004293326.1| allophanate hydrolase [Nitrosomonas sp. AL212] gi|325530443|gb|ADZ25164.1| allophanate hydrolase [Nitrosomonas sp. AL212] Length = 607 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 113/421 (26%), Positives = 179/421 (42%), Gaps = 51/421 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L GIP IKD G+ T A + P +TV +KL + GA+ +GK N+D+FA G Sbjct: 71 LYGIPFAIKDNIDLAGLPTTAACPAF-AYTPSCSATVVKKLINAGAIPIGKTNLDQFATG 129 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 + S YG R+ + G SSG + A G +C S+GTDT GS R PA+F Sbjct: 130 LNGTRSPYGAC----RNAFDPAYISGGSSSGSAVAVAKGQVCF-SLGTDTAGSGRVPAAF 184 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G KPT G S G++ SLD I T D A +LKA AGYD D + Sbjct: 185 NNLIGYKPTKGWLSTHGVVPACRSLDTVSIFAFTAIDVAHILKACAGYDAAD-------I 237 Query: 251 PDYERALDQSIQGMTV----GIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVEISL- 304 ER G + GIP + L + +P ++ + + I+ L+ G + VE+ Sbjct: 238 YSRERKSHGFNFGAALHFRFGIPHKQHLKFFDNPDNERLFNETIARLQALGGEAVEVDFE 297 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 P + A Y E RY ++ + G I+ H I+ Sbjct: 298 PFLEGARLLY------EGPWVAERYAAIQSFFELHGDQIIAPV-------------HEII 338 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN-- 422 + S+ + + + R+I+ + +T VD +LTPT T + + Sbjct: 339 VTAKHRSATDVFNGFYQLRRIKQQADQIWTH-----VDCLLTPTAGTIYSIQAMQRDPIR 393 Query: 423 -SGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + ++G+ +T +N+ AI+V A +P G+ L + L + ++ Sbjct: 394 LNTNLGY-----YTNFMNLLDYAAIAVTAGFQSNGLPFGITLAAPAHHDHPLLHLAHRLQ 448 Query: 482 K 482 + Sbjct: 449 Q 449 >gi|161525543|ref|YP_001580555.1| amidase [Burkholderia multivorans ATCC 17616] gi|189349729|ref|YP_001945357.1| amidase [Burkholderia multivorans ATCC 17616] gi|160342972|gb|ABX16058.1| Amidase [Burkholderia multivorans ATCC 17616] gi|189333751|dbj|BAG42821.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [Burkholderia multivorans ATCC 17616] Length = 458 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 113/430 (26%), Positives = 174/430 (40%), Gaps = 57/430 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML-GKLNMDEFAM 129 L GIP+ IKD F G T+A S +LD P V +L G+ NM EFA Sbjct: 74 LAGIPVSIKDLFDVAGQVTRAGSRVLDDAPPARADAVAVARVRRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+R D GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 134 SGLGLNPHFGTPASPYRRDVPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRVPTQGGVPLSTTLDSFGPIGVTVACCALVDRMLAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P A + ++G+ +G+P Y D + + + L+ AGA + E+ Sbjct: 244 -PSVPAA--RPLEGVRLGVPTNYVTDGVDADVAAALDTALKHLEAAGAIVTEVRF----- 295 Query: 310 ALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSI------GFGQEVKHR 362 S L R + R+G +E Y R + + V R Sbjct: 296 --------------SALDRLPEINRFGF-----SPIEAYAWHRPLLAEHRDRYDPRVLMR 336 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN 422 I+ G + + YL R + + D ++ PT P + + E + Sbjct: 337 ILKGEPATA-----ADYLDLLAARRAMLDEAAHTVWARFDALVAPTVPIVPPRIAELEAD 391 Query: 423 SGSMGHIYNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQ 478 + + A N A+S+P C + P+GL L P R++ L ++GQ Sbjct: 392 DAAFTRTNALILRNPSAFNFLDACALSLP---CHPRDGAPVGLMLAAAPHRDDALLAIGQ 448 Query: 479 IIEKEAGYFR 488 +E R Sbjct: 449 SVEAVLNTIR 458 >gi|99081418|ref|YP_613572.1| amidase [Ruegeria sp. TM1040] gi|99037698|gb|ABF64310.1| Amidase [Ruegeria sp. TM1040] Length = 478 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 133/505 (26%), Positives = 208/505 (41%), Gaps = 54/505 (10%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE--ESD 60 EL ++ E + R+ DIS E V S + ++ N +NA +E + +A A AE +S Sbjct: 5 ELWRLSAEELSTQTRNGDISPTEAVTSVLARMDQVNPALNAVVEDLRDEALARAEVLDST 64 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + + G L G+P+ IK G T L ++ V Q L GAV++G Sbjct: 65 PKALRGP---LHGVPVTIKINIDQTGHPTSNGIPALKDLIAPDDAPVVQNLERAGAVVIG 121 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + N EF+ + + YG +PW +PGGSSGG AAV + + G D Sbjct: 122 RSNTPEFSFRADTDNPLYGRTHNPW-----GQHISPGGSSGGGGAAVMAGIGPLAHGNDI 176 Query: 181 GGSIRQPASFTGTVGIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILL 232 GGS+R PA+ G V +KP +GR + G+++ S+ G++TR+ RD + + Sbjct: 177 GGSLRFPAAANGAVTVKPGFGRVPAWNPSQKAERGLLAQLMSVQ--GLMTRSARDLHLSM 234 Query: 233 KAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 A+ D D + PVP A D ++ V + L P +D L Sbjct: 235 PAMIAPDIRDP--FHAPVPWRGAAPDGPVK---VAFTRNTHGYDLHPEVDAALLAARDAL 289 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS 352 DAG + EI P+ ++ R G R +I + + Sbjct: 290 MDAGYIVEEIEPPNV---------------------FEAGRTGYRALMGEIHALMKPDLD 328 Query: 353 IGFGQEVKHRIMIGTYVLS-SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 G E+ R M TY + L+ R+ R + F ++LTP P Sbjct: 329 -AMGSEII-RTMFDTYFQEFPPFHGDELLKMYAKRSHYARQWA-MFMADYPLVLTPFLPH 385 Query: 412 SAF-PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK---MPLGLQLIGQP 467 F P E +G+ + V++ A+N GLPA VPA L + P+ +Q++ Sbjct: 386 PFFAPDRDREGVAGAHDVLGCAVYSYAMNYMGLPAACVPARLAQLPKGLQPINVQIVAPR 445 Query: 468 FREETLFSVGQIIEKEAGYFRPHKW 492 +RE+ IE G W Sbjct: 446 WREDMAVDAAIAIEDRIGQMAAPLW 470 >gi|187920714|ref|YP_001889746.1| amidase [Burkholderia phytofirmans PsJN] gi|187719152|gb|ACD20375.1| Amidase [Burkholderia phytofirmans PsJN] Length = 471 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 115/490 (23%), Positives = 199/490 (40%), Gaps = 57/490 (11%) Query: 11 ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARD 70 E D LR + +S +L+D+ Q+NA + ++A A A K+ + + Sbjct: 14 EVVDLLREEAVSPHDLLDTLAAQAARVEPQVNALPTLCFERAHAHANALLKKPV-AERGL 72 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ IKD G+ T S + P L G V+ K N EF G Sbjct: 73 LCGLPVPIKDLTDVAGVRTTRGSLVYRDRVPETSDAGVTLLEARGGVVYAKSNTPEFGSG 132 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +G +PW D + ++ A A G+D GS+R P++F Sbjct: 133 GHTYNSVFGVTRNPW---DLSRSAGGSSGGAAAALASGTAWVAQ--GSDLAGSLRTPSAF 187 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG++P+ GR S + + +L G + R V D+A+LL A+ G E D ++L Sbjct: 188 CGVVGMRPSPGRVSYGPLANPFDTLGIHGPMARNVTDAALLLDAMCG--EVDGAPLSLRE 245 Query: 251 P-----DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P D+ R + + V + + + P I ++ + L G + E L Sbjct: 246 PATSFLDHARRPQRPAR---VAFSEGLGIATVEPEILAICRKTMERLSTDGVSVEESDL- 301 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR------SIGFGQEV 359 A A++ + G+ Y E D+L + + +I FG ++ Sbjct: 302 DLSAATQAFHTLR------------GIAYATNYE--DVLARHRDVLNPNVIWNIEFGLQL 347 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 +R M + + K+ L++R DV++ P + FP+ Sbjct: 348 DNRAMRAAQRTRAELF-------YKLNALLQR---------YDVLICPASIVLPFPVEAR 391 Query: 420 E--NNSGSMGHIYND--VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 + + G Y D T A+ + G+P I++P + +P+G+Q++G+P E L Sbjct: 392 DIRDAVGQHFETYIDWLAITYALTLTGMPVIAIPCGMSASGLPVGIQIVGKPRGEAALLC 451 Query: 476 VGQIIEKEAG 485 + IE+ G Sbjct: 452 AARAIEEIIG 461 >gi|299136152|ref|ZP_07029336.1| Amidase [Acidobacterium sp. MP5ACTX8] gi|298602276|gb|EFI58430.1| Amidase [Acidobacterium sp. MP5ACTX8] Length = 645 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 131/263 (49%), Gaps = 12/263 (4%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 F V + + LR + +++V L Y+ ++ + ++ I + ++A A A ++D+ I Sbjct: 162 FATVRQLGEALRLRKLTSVALTKMYLARLKRYDPSLHFVITLTEERALAQAAQADREIAA 221 Query: 66 GDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R L GIP G KD A KG T + + R ++ V ++L GAV++ KL+M Sbjct: 222 GKYRGPLHGIPWGAKDLLAVKGYPTTWGAAGFEQQRFDEDAEVVKRLDAAGAVLIAKLSM 281 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 A G + + G +PW + + G S ++ V GF +IGT+T GSI Sbjct: 282 GALAQG---DLWFGGRTRNPWNPRQGSSGSSAGSGSAVAAGCV-GF----AIGTETLGSI 333 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 P++ G G++P++G R G ++ S+D+ G I R+V D A++L AI G D D + Sbjct: 334 SSPSTRCGATGLRPSFGLVPRTGGMALTWSMDKIGPIARSVEDCALVLNAIYGPDGRDQS 393 Query: 245 CVNLPVPDYERALDQSIQGMTVG 267 P + L I+ + VG Sbjct: 394 VQPAP---FHADLTLDIRKLHVG 413 >gi|91786465|ref|YP_547417.1| amidase [Polaromonas sp. JS666] gi|91695690|gb|ABE42519.1| Amidase [Polaromonas sp. JS666] Length = 468 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 124/511 (24%), Positives = 207/511 (40%), Gaps = 75/511 (14%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + E R R + ++ + + + + +E N ++NA I ++ A A+ + +R Sbjct: 5 DLWRLGAVELGQRFRERSLTPLAVAQACLARLEAVNPRLNAVIARRDEQFLAEAKAATER 64 Query: 63 IINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G L+GIP+ +KD + T + L RP ++ + GA+++GK Sbjct: 65 HARGQPLSALDGIPLTVKDSLYLADLPTTCGTAALREHRPGHDELAAARARAGGALIIGK 124 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 N+ EFA +G +PW + TPGGSSGG+ AAVA + +I D G Sbjct: 125 TNVPEFANDGYTANPLFGVTGNPW-----APELTPGGSSGGAVAAVAAGIAPLAIAQDGG 179 Query: 182 GSIRQPASFTGTVGIKPTYGRCSR-LGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GSIR+PAS TG VG+KP+ R + D G + RTV D+ +L +A+ G Sbjct: 180 GSIRRPASHTGLVGLKPSLSAWPREHALPGLLLDFDCIGPVARTVADARLLFEALRGPSP 239 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D + + + S++ + V + + L P I + + L G ++ Sbjct: 240 ADRSSMAAAWAAAQPRPAGSLRVLYV---ERLNANPLDPQIAASCLHAVQRLAALGHRVE 296 Query: 301 EISLPHT------------QYALPAYYIISPA-EASSNLARYDGVRYGLRVEGKDILEMY 347 LP Q L A + P EA ++ + G RV G + ++ Sbjct: 297 PGELPLDVRFMTEAWPQIGQVGLAAMFDQHPDWEAQASPKYREAAEAGRRVSGSRVWQIM 356 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 E R ++R+ FE+ +DV++ P Sbjct: 357 EGVRR------------------------------------LRRESAALFER-IDVVVMP 379 Query: 408 TTPT------SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGL 461 +P + G GH +T VN AGLP ++VP + +P+G+ Sbjct: 380 AAAALPWPAHEPYPSVIDGQPVGPRGHA---AYTGWVNAAGLPGLAVPCEPSREGLPIGM 436 Query: 462 QLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 Q+IG ++ L +G A Y H W Sbjct: 437 QMIGAYGADDQLLDLG------ASYEAAHPW 461 >gi|227115088|ref|ZP_03828744.1| amidase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 597 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 120/423 (28%), Positives = 179/423 (42%), Gaps = 57/423 (13%) Query: 65 NGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 N DA L G+P +KD G T A + ++T KL GA+++GK N+ Sbjct: 61 NPDALPLFGVPFAVKDNIDVAGFPTSAACPAFT-YLADKDATAVAKLKAAGAIVIGKTNL 119 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 D+FA G S +G V + + + ++ GGSS GS++ +A L A S+GTDT GS Sbjct: 120 DQFATGLVGTRSPFGEVPNTFNA-----EYISGGSSSGSASVLARGLVAFSLGTDTAGSG 174 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PA F VG+KPT G S G++ D + TV D+ + + +GYD DA Sbjct: 175 RVPAGFNNIVGLKPTKGWLSASGVVPACRLNDTISVFALTVEDAFTVAELASGYDAADA- 233 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLS-PTI------DKTWQQGISWLKDAGA 297 Y R+ S +P R S PT WQ + L++AGA Sbjct: 234 --------YSRSHPASTPA---ALPVNPRFAIPSDPTFFSDAVAQAAWQHALVELEEAGA 282 Query: 298 KIVEISLP-HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 + I TQ A Y AE + V D+L+ EN + Sbjct: 283 TLHPIDFSIFTQLADQLYQGPWVAERT--------------VAVGDMLQQPENMDPV--- 325 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT--SAF 414 V + G + + + YLRA R I++ D ++ PT+PT + Sbjct: 326 --VHGIVASGERFSAVEAFKAEYLRAELARQ-IQQTLAS-----FDALVVPTSPTIHTRE 377 Query: 415 PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLF 474 + +E S Y + FT N+A L A+++PA +P G+ LI + + L Sbjct: 378 AMKQEPVRYNSQLGAYTN-FT---NLADLSALALPAPFRTDGLPAGITLIAPAWHDRALA 433 Query: 475 SVG 477 S G Sbjct: 434 SFG 436 >gi|159130232|gb|EDP55345.1| amidase family protein [Aspergillus fumigatus A1163] Length = 582 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 137/509 (26%), Positives = 212/509 (41%), Gaps = 43/509 (8%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 +L + ++ L S ++ ++L+ Y+ I ++S +NA ++ A A A D Sbjct: 57 QLEEATIDNLQEYLSSGKLTTLQLLHCYLDRISQTDSYLNAILQH-NPDAFAIANALDLE 115 Query: 63 IINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 G R L GIP +KD ATK + T A S L G ++ V ++L + GA++LG Sbjct: 116 RARGRVRGPLHGIPFTVKDNIATKDRMETTAGSWALLGSVAPRDAFVVRRLREAGALLLG 175 Query: 121 KLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K + E+A M S+N + Y RS + PGGSS GS AV L ++GT+ Sbjct: 176 KAALSEWADMRSNNYSEGYSARGGQCRSAFNL-TVNPGGSSSGSGVAVGANLVPFALGTE 234 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GS+ PA VGIKPT G SR G+I + D G+ +TVRD+ +L AI G D Sbjct: 235 TDGSVINPAQRNAVVGIKPTVGLTSRDGVIPESLHQDTVGVFAKTVRDATYILDAIHGVD 294 Query: 240 ECD----ATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 D A PV Y + L S++G G+P E P + + ++ Sbjct: 295 PRDNYTLAQNGRTPVGGYAQYLSDRSSLKGAVFGLPWESVWRLGDPDQISQLMKLLDLIR 354 Query: 294 DAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLARYDGVRYGLRVEGKDI 343 AGA I+ PH + I+SP N + Y V+ K Sbjct: 355 AAGATIINGTEFPHYR------QIVSPDGWDWDYGSRRGYPNESEYTYVKVDFYNNIKAY 408 Query: 344 LEMYENTRSIGFGQEVKHRI----MIGTYVLSSRCYDS---HYLRARKIRTLIKRDFTEA 396 L NT V++ M G + + S + + + ++ + + +A Sbjct: 409 LSELNNTNMRSLEDLVEYNKANFGMEGGFPGVHPAFGSGQDGFEASLATKGVMDKTYWQA 468 Query: 397 FEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA---GLPAISVPAALC 453 E TT + N G + ++ +A G P +++PA + Sbjct: 469 LE-----FCRRTTREEGIDAALKHGNRTLDGLLVPPDVAQSIQIAAQAGYPVLTIPAGVS 523 Query: 454 -EKKMPLGLQLIGQPFREETLFSVGQIIE 481 E MP GL ++ F E TL IE Sbjct: 524 DESGMPYGLAIVQTAFAEPTLIKYASAIE 552 >gi|242050230|ref|XP_002462859.1| hypothetical protein SORBIDRAFT_02g033210 [Sorghum bicolor] gi|241926236|gb|EER99380.1| hypothetical protein SORBIDRAFT_02g033210 [Sorghum bicolor] Length = 504 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 142/323 (43%), Gaps = 38/323 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SE + V ++ +++ LV Y+ I N ++A IEV AA + Sbjct: 18 SEFQEVTVDAIHQGFKNGSLTSTALVRFYLDQIARLNPLLHAVIEVNPDALAQAARADAE 77 Query: 62 RIINGD--ARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 R + A L GIP+ +KD AT+ ++T A S L G ++ V +L GAV+ Sbjct: 78 RSASRGRCAVGLHGIPVLLKDNIATRDRLNTTAGSLALLGSVVRRDAGVVARLRRAGAVI 137 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD--------------KFTPGGSSGGSS 164 LGK N E+ S + PV S W + TP GSS G Sbjct: 138 LGKANPSEW--------SNFRPVESGWSARGGQTLCLLCVKLQNPYVLSATPCGSSAGPG 189 Query: 165 AAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRT 224 A A + A ++G++T GSI P+SF VGIKPT G SR G+I P D G + RT Sbjct: 190 VAAAANMAAVTLGSETDGSILCPSSFNSVVGIKPTVGLTSRSGVIPITPLQDTIGPMCRT 249 Query: 225 VRDSAILLKAIAGYDECDATCVN-----LPVPDYERALD-QSIQGMTVGIPKEY------ 272 V D+ +L I GYDE DA +P Y + L ++G +G+ + Sbjct: 250 VSDAVHVLDVIVGYDELDAEATGAASKYIPHGGYTQFLRIHGLKGKRIGVLDVFFQGYDD 309 Query: 273 -RLDYLSPTIDKTWQQGISWLKD 294 +L +D QQG +K+ Sbjct: 310 MQLAVYEKHLDTMRQQGAVVIKN 332 >gi|221198966|ref|ZP_03572011.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2M] gi|221205226|ref|ZP_03578242.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2] gi|221175017|gb|EEE07448.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2] gi|221181417|gb|EEE13819.1| putative glutamyl-tRNA(Gln) amidotransferase, A subunit [Burkholderia multivorans CGD2M] Length = 449 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 195/476 (40%), Gaps = 64/476 (13%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING-DARDLEGI 74 +R+ +SAV++ + I N+Q NA +A AA D + G DA L G+ Sbjct: 18 VRTGRLSAVQVARQALDDIGTRNAQFNAISMCFDTRALEAAARVDACVRAGRDAGPLAGV 77 Query: 75 PIGIKDCFATKGIHTQACSHI-LDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 P +K F G T A S L ++++ +L GAV + +MDEFA G++ Sbjct: 78 PFVVKSNFDVAGYATVAGSPTRLRAPAARCDASMVDRLVQAGAVPVAATHMDEFACGATG 137 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 ++G V P + T + G ++ ++ V ++G+DT GSIR PA+ G Sbjct: 138 VNPHFGAVRLPADASRMTGGSSSGSAAAVAAGHV-----PLALGSDTNGSIRAPAALCGV 192 Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP-- 251 IKPT+GR S G + +A SLD AG + D L A++ DA + P+ Sbjct: 193 WAIKPTHGRLSMDGCVPYASSLDAAGGFAANLDDLCALYDALSCTSRDDAPIGHAPLRVG 252 Query: 252 ----DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 ++ER D ++ + ++ + H Sbjct: 253 VLTGEFERRADAQVR--------------------RAVERATACFAQHD---------HV 283 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGT 367 Q ++ P AS+ L + + + +L+ + S + ++ + IG Sbjct: 284 QAVPIDESVLEPIRASARLVS----NFEVARRHRALLDADASRVSAHLRERIRTGLAIG- 338 Query: 368 YVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA--FPLGKEENNSGS 425 D+ Y A R + FE+ D+++ P TP A F + N + Sbjct: 339 --------DAAYADALAHRAEWQARLAALFER-FDILIAPATPYVAPRFSDATVDVNGEA 389 Query: 426 MG-HIYNDVFTVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQ 478 + +FT ++ AGLP +S P C K +P G+QLIG+P E + + Sbjct: 390 LDPKTTLGMFTQPISFAGLPVVSAP---CHAKGELPAGVQLIGRPGDERRCLAAAR 442 >gi|302804769|ref|XP_002984136.1| hypothetical protein SELMODRAFT_11948 [Selaginella moellendorffii] gi|300147985|gb|EFJ14646.1| hypothetical protein SELMODRAFT_11948 [Selaginella moellendorffii] Length = 487 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 118/497 (23%), Positives = 203/497 (40%), Gaps = 54/497 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESDKRIINGDARDLEGIPI 76 ++ +++ +LV+ YI+ + + Q+ + IE+ + A + ++++ G L GIPI Sbjct: 17 ARGLTSRKLVELYIERVRRHDPQLKSIIELNPDVWKLADQADAERSAAGGYVGGLHGIPI 76 Query: 77 GIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--- 132 +KD AT + T A S L E+ V L GA++ GK N+ E S Sbjct: 77 LLKDNIATADSLSTTAGSFALFPNTVKDEAFVVSLLRKAGAIIFGKANLSELMHFRSQLL 136 Query: 133 -NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 N S G S+DS P GSS GS+ AVA L + S+GT+T GS+ P+S Sbjct: 137 PNGFSPRGNQTKDPYSLDSD----PCGSSTGSAVAVAANLVSVSLGTETQGSLICPSSRN 192 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 V IKPT G SR G+I + + D G + +TV D+ + L I G D D +P Sbjct: 193 AVVSIKPTVGLTSRSGVIPISINFDTIGPMAKTVADAVLTLDKIVGSDPKDKATFACKLP 252 Query: 252 DY---ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE-ISLPHT 307 DY + G + I + D + I+ +K GA I++ +++P Sbjct: 253 DYGFHSHLKADGLCGKRIAISRSPFFDEVPSFEVAVINNAIATMKYKGAVIIDNVTIPTI 312 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYG--------LRVEGKDILEMYENTRSIGFGQ-- 357 + + P + + + L K++ ++++ R F Q Sbjct: 313 GEIINGTALFPPPLKADVVTLLTDFKIQIEEYLGGLLETPVKNLQDIFDFDR---FSQPE 369 Query: 358 ---EVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ-GVDVILTPTTPTSA 413 + I + R ++ L L + + F++ +D I+ P + A Sbjct: 370 EFAKFPDDIFNASLQTQGRDTAAYQLALATDFNLTRDGLLKIFQELQLDAIVAPADSSIA 429 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE-KKMPLGLQLIGQPFREET 472 P ++ G PAI++PA +P G+ ++G E Sbjct: 430 VP----------------------ASIGGFPAITLPAGYSPLNGLPYGITIVGNRCSEAK 467 Query: 473 LFSVGQIIEKEAGYFRP 489 L + +E+E +P Sbjct: 468 LVEIAFALEQETKARKP 484 >gi|169849602|ref|XP_001831504.1| amidase [Coprinopsis cinerea okayama7#130] gi|116507456|gb|EAU90351.1| amidase [Coprinopsis cinerea okayama7#130] Length = 575 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 142/309 (45%), Gaps = 40/309 (12%) Query: 15 RLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NGDARD-LE 72 R++S + +A ++++YI ++S+ N EV +AR A+E D G + L Sbjct: 51 RIQSGEWTASRVLEAYIARAAFAHSKTNCLTEVFFDRARERAKELDAYFAETGKLKGPLH 110 Query: 73 GIPIGIKDCFATKGIH-TQACSHILDGFRPHYEST-VTQKLWDNGAVMLGKLNMDE--FA 128 G+PI IKD F +G+ + S+ L+ +P + + + L D GAV+ K N+ + FA Sbjct: 111 GVPISIKDQFKIEGLDGSIGFSNWLN--QPATSNADIIKYLLDAGAVLYVKTNVPQTMFA 168 Query: 129 MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPA 188 SN +G +P+ D +T GGSSGG A +A IGTD GGS+R PA Sbjct: 169 FECSNPV--FGRTTNPY-----NDAYTCGGSSGGEGALIALDGSPLGIGTDIGGSLRIPA 221 Query: 189 SFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRDSAILLKAIAGYDECDAT 244 ++ G +KP YGR S G P D AG + R+V D +L + + G Sbjct: 222 TYCGIYSLKPGYGRISYFGARGPVPGFDGIRTVAGPMGRSVEDLVLLSRTVFGLPGTAND 281 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLDYL--------SPTIDKTWQQGISWLKDAG 296 +P D V +P + + Y SPT + + + L+ G Sbjct: 282 IPPVPFKD-------------VTLPAKLKFGYYTSDGYIKASPTCKRAVLETVEALRKQG 328 Query: 297 AKIVEISLP 305 + VE+ LP Sbjct: 329 HECVEVELP 337 >gi|226227708|ref|YP_002761814.1| hydrolase [Gemmatimonas aurantiaca T-27] gi|226090899|dbj|BAH39344.1| hydrolase [Gemmatimonas aurantiaca T-27] Length = 502 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 138/509 (27%), Positives = 213/509 (41%), Gaps = 80/509 (15%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D + +++SA E+ ++ + I N +NA + + AR + DA G Sbjct: 18 DLIARRELSAAEVTEAALARIALRNPALNAVVRPLDTLARQMVAN-----VPSDA-PFAG 71 Query: 74 IPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +P+ IKD AT G+ T + + +L P ++ + + GAV +GK N EF + Sbjct: 72 VPMLIKDLLATIAGVPTSSGTRVLQQVIPPSDTELVARYRRAGAVFVGKTNTPEFGLTPF 131 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+ GP SPW + TPGGSSGGS AAVA + + G D GGS+R PAS G Sbjct: 132 TESEALGPARSPWNV-----ERTPGGSSGGSGAAVAARMVPIAHGGDGGGSLRIPASCNG 186 Query: 193 TVGIKPTYGRCSRLGIISFAPSLD-------QAGIITRTVRDSAILLKAIAGYDECDATC 245 IKP+ GR + P + Q +ITR+VRDSA +L A G D T Sbjct: 187 VFSIKPSRGR------LPMGPDIGDSWRGFVQEHVITRSVRDSAAMLDATMGEDV--GTP 238 Query: 246 VNLPVPD--YERALDQSIQGMTVGIPK-EYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 V +P + Y + + +++ + + D + P D S L G VE Sbjct: 239 VAMPTFNGRYLDEVSRDPGPLSIAVTSTPFFGDVVHPDCDAALTDAESLLSGLGHD-VER 297 Query: 303 SLPHTQYALPA--YYIISPAEASSNLARY-DGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 + P A + I AEA +++ D +R R + ++ T ++G V Sbjct: 298 AAPVLDGRTLARDFLTIVAAEARADIEWLGDQLRRAPRSDDVEV-----ATWALGL---V 349 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 Y +S R H R AF D+++TPT FP+G Sbjct: 350 GRSFSASDYAVSVRRL-QHAGR-----------IVGAFFTRYDLLITPTVAMPPFPIGAL 397 Query: 420 ENN---------------------SGSMGHIYNDVF-----TVAVNMAGLPAISVPAALC 453 + + +G + VF T N+ G PA+SVP Sbjct: 398 QPSGAERFALALFGRMRLGGALRMAGLLDETAKKVFAFMPYTPLFNVTGQPAMSVPLYWN 457 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + +P+G Q++G+ E TLF V +E+ Sbjct: 458 AEGLPIGTQVVGRFGEEATLFRVAGQLEQ 486 >gi|126724770|ref|ZP_01740613.1| amidase [Rhodobacterales bacterium HTCC2150] gi|126705934|gb|EBA05024.1| amidase [Rhodobacterales bacterium HTCC2150] Length = 464 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 127/489 (25%), Positives = 212/489 (43%), Gaps = 55/489 (11%) Query: 4 LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI 63 L F +S+ R+++ S +ISAV+L++ + I+ +N +NA + + + A E+ K I Sbjct: 3 LAFAPLSDLRNKIDSGEISAVDLMNDTLDRIDATNPTINAVVSLRNRDDLLA--EAAKPI 60 Query: 64 INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLN 123 A L GIPI IKD T + T S IL P+ +++ ++ GA+++GK N Sbjct: 61 ----AGPLSGIPIAIKDLSDTANLKTTYGSPILANNIPNNDASFVARIRAVGAIIIGKTN 116 Query: 124 MDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGS 183 EF +GS +G +P+ T K G S G ++A G+ A G+D GS Sbjct: 117 TPEFGLGSHTYNPVFGATKNPF----DTSKTAGGSSGGAAAALAMGYFPVAD-GSDMMGS 171 Query: 184 IRQPASFTGTVGIKPTYGRCSRLGI-ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 +R PA + G +P++GR + + SL +G + R + D LL D Sbjct: 172 LRNPAGYCNVYGFRPSFGRVPGDDVGDQYLHSLATSGPMARNIADLTSLL------DIMS 225 Query: 243 ATCVNLPVPDYERA-----LDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAG 296 A + P + LD I +G ++ Y P + + G+ L+ G Sbjct: 226 APSIGPFHPQFSDGPFSGQLDAGIANPRIGWLGDWGGAYQCQPGVLDLCETGLKTLESLG 285 Query: 297 AKIVEISLPHTQYALPAYYI-ISPAEASSNL-ARYDGVRYGLRVEGKDILEMYENTRSIG 354 AKI I+ P + ++ +I + + +N YD + +++ I E+ EN S+ Sbjct: 286 AKIDPIAPPVSSNSIWQSWIDLRSFQLLANFKPLYDNPDHRKKLKPAVIWEV-ENALSLN 344 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 +S+ + A + RT R E FE D + PT F Sbjct: 345 ----------------ASKIH-----AASEARTNWYRAAMELFET-YDFLALPTAQMFPF 382 Query: 415 P-----LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 L K N H + + V V++ GLPA++VP E P+G+Q+I +P Sbjct: 383 DVDIDFLTKINNQPMDTYHRWMEC-VVPVSLLGLPALNVPCGFDELGRPMGMQIIAKPGA 441 Query: 470 EETLFSVGQ 478 + +G Sbjct: 442 DLAALQLGH 450 >gi|119477646|ref|ZP_01617796.1| hypothetical protein GP2143_09295 [marine gamma proteobacterium HTCC2143] gi|119449149|gb|EAW30389.1| hypothetical protein GP2143_09295 [marine gamma proteobacterium HTCC2143] Length = 468 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 136/492 (27%), Positives = 214/492 (43%), Gaps = 53/492 (10%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 V E ++R+K +SA EL + I+ + ++N++ V A++A A A D I G+ Sbjct: 8 VIELAAQVRNKVLSATELTRQALDNIDRLDGEINSFCAVNAEQAIAQASAVDVAIARGEY 67 Query: 69 RDLEGIPIGIKDCFATKGIHTQ--ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 L GIPIG+KD +G T + H D + +S + +L G V+LGK N E Sbjct: 68 LPLAGIPIGVKDLEDAEGFVTTYGSAMHTNDDVAAN-DSALVDRLRAAGCVVLGKTNTPE 126 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 F + +G +PW +TPGGSSGGSSAA+A + + G+D GGSIR Sbjct: 127 FGHKGKTDNIPFGATRNPWNL-----AYTPGGSSGGSSAAIAAGIIPLATGSDGGGSIRI 181 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPS-LDQAGIITRTVRDSAILLKAIAGYDECDATC 245 P++ G GIK + GR GI L G + RT D+A +L G + D Sbjct: 182 PSAICGLSGIKTSQGRIPNGGINPPGSGVLTVKGPMARTTLDTAYVLDHTVGELKTDI-- 239 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT-----IDKT----WQQGISWLKDAG 296 +PD + +Q + +PK SPT +DK +Q I+ L+ AG Sbjct: 240 --FALPDKTENWFEGVQAAS--LPKTV---IWSPTMGFADVDKEILIRCEQAIAKLQQAG 292 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG 356 ++E T+ + + + AR R ++G D E + Sbjct: 293 VNVIENDAIWTEDPVREWLVF------WTCAR---ARAQQHLKGTDSWEQID-------- 335 Query: 357 QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPL 416 +++ I +G +S Y S ++ ++ F +A +ILTP T L Sbjct: 336 PQLRVMIEMGMNKMSGPDYASAIDACHRMNYQLETAFAQA-----PLILTPATCGHTPKL 390 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + +G + FT+ +NM PA VP +P+ LQ+IG R+ SV Sbjct: 391 DADGVVNGLETPSWV-AFTMGINMTRNPAGVVPIDTTAAGLPIALQVIG---RQREDLSV 446 Query: 477 GQIIEKEAGYFR 488 + + G F+ Sbjct: 447 LRAMHAMEGVFQ 458 >gi|332306574|ref|YP_004434425.1| Amidase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173903|gb|AEE23157.1| Amidase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 411 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 23/191 (12%) Query: 39 SQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA------C 92 S Y+ V +K A + D L G+ + +KD F KG+ T A Sbjct: 16 SSQTPYVLSVTEKEYPAKQ--------ADNLMLSGVTLAVKDLFHIKGLPTTAGNPDWLA 67 Query: 93 SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD 152 SH + P + + + L +NGA ++GK DE A + + +YG +P+ ++ + D Sbjct: 68 SHPI----PVHTAPAVETLLENGAQLVGKTITDELAYSLNGQNIHYG---TPF-NISAPD 119 Query: 153 KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFA 212 + PGGSS GS+ AV +GTDTGGSIR PAS+ G G++PT+GR S ++S A Sbjct: 120 RI-PGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGLFGLRPTHGRISSEHMVSLA 178 Query: 213 PSLDQAGIITR 223 PS D G ITR Sbjct: 179 PSFDTVGWITR 189 >gi|15890542|ref|NP_356214.1| amidase [Agrobacterium tumefaciens str. C58] gi|15158785|gb|AAK88999.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium tumefaciens str. C58] Length = 465 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 127/497 (25%), Positives = 210/497 (42%), Gaps = 50/497 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M++L + E R K +S E + IE +NA + AR A S Sbjct: 1 MTDLIDLNTLEILALYREKKLSPSEYWQAVETRIEAFEPVVNALYAYDPEDARRQAAAST 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +R G+ L+G+P+ +K+ ATKG + ++ ++ V + ++GA++ Sbjct: 61 QRWQRGETLGPLDGLPVSLKELIATKGHPVPLGTKAVELVPALEDAPVAARCREDGAILY 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 K ++ M SS +S++ +PW D T PGGSS G+++A A IGTD Sbjct: 121 AKTTCPDYGMLSSGLSSFHKLSRNPW---DPTQN--PGGSSAGAASAGAAGYGTLHIGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ--AGIITRTVRDSAILLKAIAG 237 GGS+R PA +TG G KP+ GR I P AG +TRTV D+A + ++ Sbjct: 176 IGGSVRLPAGWTGLFGFKPSQGR------IPVDPYYTGRCAGPMTRTVTDAAYAMATLSR 229 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAG 296 D D T + D+ LD + G+ +G+ LD +D+ + + A Sbjct: 230 PDWRDGTSLPPNAIDW-MDLDIDVTGLKIGL----MLDAGCGLPLDEEVRDAVV----AA 280 Query: 297 AKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVE-GKDILEMYENTRSIGF 355 AK+ E A I P E DG+ R + D++ + + R+ Sbjct: 281 AKLFEQ----------AGAFIIPVEPVLTRDMLDGLDDFWRAKFWGDMVALSADRRA--- 327 Query: 356 GQEVKHRIMIGTYVLSSRCYDSHYLRARKI----RTLIKRDFTEAFEQGVDVILTPTTPT 411 I Y+L ++ AR + +T+ R Q VD +++P P Sbjct: 328 --------AILPYILEWAEKGANVSGARAVFGFNQTMEMRKACGRLMQSVDAVISPVNPI 379 Query: 412 SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREE 471 +++P + + FTV NM+ PA S+ + MP+GLQ+IG + + Sbjct: 380 ASYPADWASPTNDPARPFEHIAFTVPWNMSEQPASSINCGFSKSGMPIGLQIIGPRYEDL 439 Query: 472 TLFSVGQIIEKEAGYFR 488 + + + E G R Sbjct: 440 FVLRLSKAFENWGGGVR 456 >gi|326388363|ref|ZP_08209959.1| Amidase [Novosphingobium nitrogenifigens DSM 19370] gi|326207095|gb|EGD57916.1| Amidase [Novosphingobium nitrogenifigens DSM 19370] Length = 529 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 117/464 (25%), Positives = 205/464 (44%), Gaps = 53/464 (11%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR--DLEGIP 75 ++ ISAVE++++++ I+ N +NA I + + A A E+ R++ L G+P Sbjct: 58 TRRISAVEVMEAFLDRIDALNPTVNAIIGLQDRGAMVRAAEASDRVVGAGIPLGALHGLP 117 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 +KD G+ S I ++S ++L G +GK N EF +GS Sbjct: 118 HAVKDLEPVAGLPFTMGSPIFAHDIAGHDSLPVERLRRAGVTFIGKTNTPEFGLGSHTVN 177 Query: 136 SYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVG 195 +G +P+ S SSGG++ A+A + + G+D GGS+R PA++ G Sbjct: 178 PIWGATRNPYDLSRSAGG-----SSGGAAVALALDMVPLADGSDYGGSLRNPAAWNNVYG 232 Query: 196 IKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-------ECDATCVNL 248 + G + PS G + R V D A++L +AG D CD + + Sbjct: 233 FRTGMGCIPADTNDDWLPSPGVVGPMARNVGDLALMLSVMAGRDIRAPLSEACDTAALRM 292 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 P S++G +G ++ P + T +Q + GA IVE+ Sbjct: 293 VEP-------ASLRGKRIGWSGDFGGAVPFDPGVLDTCRQALDRFAAMGADIVEV----- 340 Query: 308 QYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN-TRSIGFGQEVKHRIMIG 366 +P + P E + + G+R+ + G ++++Y + + G E I G Sbjct: 341 ---VPDF----PVEEAWRA--FVGLRH--WINGSGMIDLYRDPAKRAGLKPEAIWEIE-G 388 Query: 367 TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSM 426 LS+ YD L A +RT R F + D+ + P+ FP+ E++ + Sbjct: 389 GMALSA--YDVSALSA--VRTRWSRAVASVFRR-CDLWIVPSAQVFPFPI--EQDWPRHV 441 Query: 427 GHI----YNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLI 464 G + Y++ VA V +AG PA++VPA + +P+G+Q++ Sbjct: 442 GGVTMTSYHEWMKVACLVTLAGCPALAVPAGFNDGGLPMGVQIV 485 >gi|111021770|ref|YP_704742.1| amidase [Rhodococcus jostii RHA1] gi|110821300|gb|ABG96584.1| probable amidase [Rhodococcus jostii RHA1] Length = 477 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 127/502 (25%), Positives = 202/502 (40%), Gaps = 77/502 (15%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEV-VAQKARAAAEESDKRIINGDARDLEGI 74 LRSKDISA EL+D + I N +NA + + + + AA + L G+ Sbjct: 16 LRSKDISARELLDLHTDRIAQVNPTVNAIVSLDLDRAHATAAAADAQTAAGTPVGPLHGL 75 Query: 75 PIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 P KD G T A S +L P + +++ GAV +GK N+ EFA GS Sbjct: 76 PFAFKDTHDVAGFPTVAGSPLLVDNVPETSELIAERVIAAGAVTIGKTNVPEFAAGSHTF 135 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +G +P+ D T S+ A G+D GGS+R PASF V Sbjct: 136 NPVFGTTTNPY---DPTKSAGGSSGGAASALGAGLVPLAD--GSDMGGSLRNPASFCNVV 190 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-------ECDATCVN 247 G++PT GR + +L G + R V D +LL I+G D DA Sbjct: 191 GLRPTPGRVPCWPNSAPWDALVTQGPMARNVDDLELLLSVISGPDARIRSSLSADALAPR 250 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPT---IDKTWQQGISWLKDAGAKIVE--I 302 L V +QG+ V + + L+ + P + + + S AGA + E Sbjct: 251 LGV--------AGLQGLRVAVSMD--LNGIFPVDAPVREIHDRQSSIFAAAGAVVAEDAP 300 Query: 303 SLPHTQYA---LPAYY----IISPAEASSNLAR---YDGVRYGLRVEGKDILEMYENTRS 352 S+P ++ L A+ + A+A+ +L + D +R R+ D+ ++ Sbjct: 301 SIPDAEWVFRTLRAWRFKIDLGDRADATPDLLKPSLLDNIRQADRLSADDV------AKA 354 Query: 353 IGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTS 412 + E++ R + + H + + ++ D + VD Sbjct: 355 MVAQAEIQQRAV--------EFFAHHDVLVMPVSQVLPFDAELEYPAAVD---------- 396 Query: 413 AFPLGKEENNSGSMGHIYNDVFTVA--VNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 G+ ++ Y D T A V + G PAISVPA +P+G+Q++ P + Sbjct: 397 ----GRRCDD-------YLDWMTSALTVTVLGCPAISVPAGFSADGLPVGVQIVAAPGND 445 Query: 471 ETLFSVGQIIEK--EAGYFRPH 490 L V + E+ G RPH Sbjct: 446 LFLLDVARAYEQLDPVGATRPH 467 >gi|307202752|gb|EFN82043.1| Fatty-acid amide hydrolase 2 [Harpegnathos saltator] Length = 560 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 114/503 (22%), Positives = 207/503 (41%), Gaps = 59/503 (11%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD 67 AVS ++ ++R++ +++ ++V +YI+ + NS +NA +E A A D I G Sbjct: 94 AVSLAK-KIRTRQVTSEDVVKAYIKRCQEVNSLINAIVEERYSDAIEEAIAVDAMIEKGI 152 Query: 68 ARDLE---------GIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D+E GIP K+ KG IH+ + R ++TV L + G + Sbjct: 153 --DIEMIKMKQPFLGIPFTTKESNQAKGMIHSMGILPRCN-IRSEKDATVVGYLKEAGGI 209 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++ K N+ E + + YG +P+ + T GGSSGG A +A SI Sbjct: 210 LIAKTNIPELNLWIESRNKVYGQTNNPYNTTR-----TVGGSSGGEGAIIAACGAPISIA 264 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGI----ISFAPSLDQAGIITRTVRDSAILLK 233 +D GGS R PA F G G KP+ G GI + ++ AG I + D + LK Sbjct: 265 SDIGGSTRMPAFFNGLFGFKPSEGVTPIAGIGLREEDYPNTMVSAGPICKKAEDLTLFLK 324 Query: 234 AIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 +AG + T + L Y+ ++ + R+ ++ ++ ++ + LK Sbjct: 325 VLAG---PNTTMLRL----YDSVNLADLKVYYQECSGDLRVSKVNKSMRVVLKKAVEHLK 377 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 + +I +P ++Y+ + E + G +Y + K++ + I Sbjct: 378 NLTGSATKIKIPGSEYSFKLWKYWMSRENFNFKLEITGRKYVTNAK-KELYNFITGSSEI 436 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLR------ARKIRTLIKRDFTEAFEQGVD-VILT 406 +K D +L A ++ + + T G D ++L Sbjct: 437 TLAAIMK-------------LVDEDFLPKVNAKWAEEVTGMANKFLTNVL--GHDGILLY 481 Query: 407 PTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 P+ P A + S+ +N + N+ P VP L E +P+G+Q++ Sbjct: 482 PSAPFPAV------YHYSSLLRPFNFSYWCLFNVLRFPVCQVPMGLDENGLPVGIQVVAA 535 Query: 467 PFREETLFSVGQIIEKEAGYFRP 489 P+ + +V + +EK G + P Sbjct: 536 PYNDHLCIAVAKELEKAFGGWVP 558 >gi|296535234|ref|ZP_06897446.1| possible amidase [Roseomonas cervicalis ATCC 49957] gi|296264438|gb|EFH10851.1| possible amidase [Roseomonas cervicalis ATCC 49957] Length = 419 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 126/490 (25%), Positives = 202/490 (41%), Gaps = 76/490 (15%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL + SE+ R+ + +SA EL ++ + I +++A+ A A A + Sbjct: 1 MTELADLPASEAARRIAAGRLSAAELAEACLDRITAREGEVHAF----AAHAPDAVRAAA 56 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G L G+PIG+KD T T+ S I G +P ++ GA+++G Sbjct: 57 ARPLPGA---LSGLPIGVKDVLDTSDFITEYGSPIWSGHQPRADAAAVALARRAGALVMG 113 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EFA T + GP +P R TPGGSS GS+A VA + GT T Sbjct: 114 KTVTTEFA------TRHPGPTRNPHRL-----THTPGGSSQGSAAGVAAGFFPLAFGTQT 162 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240 GS+ +PA++ G G KP++G R G+ + SLD G+ R D A+ A+ G Sbjct: 163 AGSVLRPAAYCGVTGFKPSFGLIHRAGMKVMSESLDTIGVFGRRAADCALFAGALTGL-- 220 Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 D R +++ + P E + LSP ++ AGA + Sbjct: 221 -----------DLSRPAERAPRIAFCPGPAEAK---LSPETTALLRRVADSCAAAGAVVA 266 Query: 301 EISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 E SLP + L D V +GL + G E +S+ + ++ Sbjct: 267 EWSLP------------------AALREADAV-HGLVMNG-------ETAQSLAWERDAA 300 Query: 361 HRIMIGTYVLSSRC-----YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFP 415 + + VL+ R +D+ L + R +G D++LT P A Sbjct: 301 REKI--SAVLNERLDWAESHDAAALVEGRAAFARARAAFATAMEGYDILLTAAAPGEA-- 356 Query: 416 LGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 S G + A++ P IS+PA +PLG+QL+ ++ L + Sbjct: 357 ----PAGIDSTGEPACNALWTALHG---PCISLPAGHGATGLPLGIQLVAPFGQDAALLA 409 Query: 476 VGQIIEKEAG 485 +E+ G Sbjct: 410 WAGWVERRLG 419 >gi|229029651|ref|ZP_04185727.1| Amidase [Bacillus cereus AH1271] gi|228731655|gb|EEL82561.1| Amidase [Bacillus cereus AH1271] Length = 536 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERSRN 132 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T+ + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTEKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVAADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + YD Sbjct: 248 TTGSIVAPATQQSVVGLRPSLGMVSRSGIIPLAETLDTAGPMARTVKDAATLFNVMVSYD 307 Query: 240 ECDATCVNLPVP---DYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 E DA + DY + L ++G VG+ + +D + ++ L+DA Sbjct: 308 EKDAMTEKMKDKERIDYTKDLSIDGLKGKKVGVL--FSIDRQDENRKEVAEKIRKDLQDA 365 Query: 296 GA 297 GA Sbjct: 366 GA 367 >gi|319781387|ref|YP_004140863.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167275|gb|ADV10813.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 431 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 47/420 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD G T+A S +L P ++ + +L GAV++GK NM EFA Sbjct: 53 LDGTIVSIKDLLDVAGEPTRAGSLMLRTTAPPLRDAVIVSRLRQAGAVIIGKTNMTEFAF 112 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + + ++G +P ++D++ PGGSS G+ +V SIG+DTGGSIR PAS Sbjct: 113 TAIGDNQHFG---TPGNAVDASR--IPGGSSSGAGVSVGEGTSEISIGSDTGGSIRIPAS 167 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R G + +LD G + RTV A +AG T + L Sbjct: 168 LNGVVGFKPTARRVPLAGAFPLSATLDSIGPLARTVAQCAAADAVMAGEVPTALTPIAL- 226 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 G+ +GIP+ + + + + + ++ GA+I ++S+ Sbjct: 227 ------------AGLRIGIPRGVLFEETEDEVATAFDRCLGKIEQTGARIEDLSIDDLLA 274 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 L A A ++A +G E++ + + G V + G Sbjct: 275 DLRA------ATKRGSIAAMEGA------------EVHADWLATGASVPVDPHVS-GPLS 315 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG----S 425 ++ Y+RA + RT + E VDV+ PTTP +A + +++G + Sbjct: 316 RAAMLPTPVYIRAMRRRTALAAAMDERLSS-VDVLALPTTPVTAPTIVSMSDDAGLRDRT 374 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 G + + T N L AIS+P + ++P GL L+ + ++ L + +E+ G Sbjct: 375 EGLLLRN--TQVANQFDLCAISLP--MPGTQLPAGLMLVARNGHDQRLLRIAAEVEQLLG 430 >gi|254510267|ref|ZP_05122334.1| indoleacetamide hydrolase [Rhodobacteraceae bacterium KLH11] gi|221533978|gb|EEE36966.1| indoleacetamide hydrolase [Rhodobacteraceae bacterium KLH11] Length = 479 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 122/491 (24%), Positives = 194/491 (39%), Gaps = 52/491 (10%) Query: 17 RSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKA-RAAAEESDKRIINGDARDLEGIP 75 RS DISA + V S + + +N +NA +E ++ A A R A L G+P Sbjct: 19 RSGDISAEDAVQSAVHRMHQANPALNAVVEDLSVDALERARALDRARARGAPAGPLHGVP 78 Query: 76 IGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNET 135 + IK KG T L ++ V L GA+++G+ N EF+ + + Sbjct: 79 VTIKVNVDQKGHATTNGVVALKDVIAPDDAPVVSNLQKAGAIVIGRTNTPEFSFRADTDN 138 Query: 136 SYYGPVISPW-RSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + YG +PW R + G++ + G G D GGS+R PA+ G V Sbjct: 139 TLYGRTHNPWGRHISPGGSSGGAGAAVMAGIGALGH------GNDIGGSLRFPAAANGAV 192 Query: 195 GIKPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 +KP GR + G++ A S+ G+ITR D + + ++ D D V Sbjct: 193 TVKPGLGRVPAWNPSQQAERGLL--AQSMSVQGLITRRAVDLHVSMPSLIATDPRDPFHV 250 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 ++P R D + + V K L P +DK L DAG + EI P Sbjct: 251 SMP----WRG-DTTDGPIKVAFTKNTFGYALHPEVDKALDTARDALIDAGYLVEEIEPPD 305 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIG 366 ++ R G R ++L + + Q + R + G Sbjct: 306 V---------------------FECGRLGYRALMGEVLTLMKGDIEAAGSQTI--RDIFG 342 Query: 367 TYVLS-SRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF-PLGKEENNSG 424 Y ++A R+ R+++ F Q ++L+P P F P E G Sbjct: 343 VYFQEFPPIVGPELVQALAQRSHFAREWS-VFMQEYPLVLSPFLPQPFFKPDRDTEGAEG 401 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIE 481 + V++ A+N GLPA SVPA L + P+ +Q+ + +RE+ IE Sbjct: 402 VHEVLGCAVYSYAMNFLGLPAASVPARLADLPKGPQPINIQIAARRWREDMAVDAAIAIE 461 Query: 482 KEAGYFRPHKW 492 + G P W Sbjct: 462 ERVGPMAPILW 472 >gi|146417511|ref|XP_001484724.1| hypothetical protein PGUG_02453 [Meyerozyma guilliermondii ATCC 6260] Length = 369 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 7/182 (3%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ IKD KG T A L F P ++T + L + GA+++GK N+D+FA G Sbjct: 70 LYGVPVAIKDNIDVKGFKTTAACP-LYAFEPKEDATTVRLLRNAGAIIIGKTNLDQFATG 128 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG I+P DK+ GGSS GS++ VA + ++GTDT GS R PA+ Sbjct: 129 LVGTRSPYG--ITP---NTFNDKYVVGGSSAGSASVVARGIVPIALGTDTAGSGRVPAAL 183 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 +G+KPT G S G++ SLD I + ++D+ + +A + + + + P+ Sbjct: 184 NNVIGLKPTKGVFSCGGVVPACKSLDCVSIFSLNLQDAQLTFNLMA-HPDTENDEYSRPM 242 Query: 251 PD 252 PD Sbjct: 243 PD 244 >gi|23009031|ref|ZP_00050233.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Magnetospirillum magnetotacticum MS-1] Length = 305 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 143/333 (42%), Gaps = 49/333 (14%) Query: 167 VAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 +A L ++ +DT GSIR P++F G G+KPTYGR SR G F SLD G + R+ R Sbjct: 1 MAAGLVPVALASDTNGSIRVPSAFCGCFGLKPTYGRLSRAGSFPFVGSLDHLGPMARSSR 60 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQ 286 D A+ A+ G D D + P LD+ I + + + Y + P Sbjct: 61 DLALAYDALQGPDPEDPAATSRPAEPALPDLDRGIADLRIAVAGGYFANRGDPEAFAAVA 120 Query: 287 QGISWLKDAGAKIVEISLPHTQYALPAYYIISPAE-ASSNLARYDGVRYGLRVEGKDILE 345 + L G+ + +P A A Y+I+ AE A+ +L R LR D Sbjct: 121 RVAGALGVTGS----VEIPEAARARAAAYLITAAEGAALHLDR-------LRERAGD--- 166 Query: 346 MYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVIL 405 F V+ R++ G + + RA++ R + + F + VDVIL Sbjct: 167 ---------FDPAVRDRLLAGAMLPA-----PFVERAQRFRRWYRDAVLDLFRE-VDVIL 211 Query: 406 TPTTPTSAFPLGKEENNSGSMGHIYNDV----------FTVAVNMAGLPAISVPAALCEK 455 P TP A SG + + V FT ++ GLP ++VP L + Sbjct: 212 APATPCRA-------PRSGQTSFVLDGVALPVRANLGLFTQPLSFIGLPVVAVPVWL-DD 263 Query: 456 KMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 +PLG+Q++ P+ E V +E+ AG R Sbjct: 264 GLPLGVQVVAAPWNESLCLRVAHHLER-AGAVR 295 >gi|288961226|ref|YP_003451565.1| amidase [Azospirillum sp. B510] gi|288913534|dbj|BAI75021.1| amidase [Azospirillum sp. B510] Length = 479 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 121/497 (24%), Positives = 202/497 (40%), Gaps = 55/497 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 M ++ R+ +++SA+E S ++ ++ N +NA + ++ A A AE +D+ G Sbjct: 14 MDATDLATRIAKRELSALEAARSCLERLDAVNPAINAMVGDLSAGALAEAERADRLAEAG 73 Query: 67 DA-RDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 +A L G+P+ K G+ T G +S GAV +G+ N Sbjct: 74 EAFAPLHGVPVTTKINVDQAGVATTNGVSAFTGLIAETDSPPVANWRKAGAVFIGRTNAP 133 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 F++ + +G ++PW + SSGG++AAVA + + G D GS R Sbjct: 134 PFSVRWFTDNEPHGLTLNPWNPARNVGG-----SSGGAAAAVATGIGPLAHGNDLAGSAR 188 Query: 186 QPASFTGTVGIKPTYGRCSRLGIISFAPS-----------LDQAGIITRTVRDSAILLKA 234 PAS G G++PT GR + +F P+ G++ R+VRD + L+ Sbjct: 189 LPASACGIYGMRPTTGR-----VPAFNPTGKGERSLCLQIGSSQGVLARSVRDIRLGLET 243 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQ-GMTVGIPKEYRLDYLSPTIDKTWQQGISWLK 293 + D D V P P D ++ + G P +Y +D P + + WL Sbjct: 244 MVPRDARDPLWV--PAPLAMAGDDDKVRVALFTGEP-DYAID---PAVRDALRLAGDWLS 297 Query: 294 DAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 DAG + E + P + + +AR G ++G + +++ Sbjct: 298 DAGYAVEEAAPP----------------SFAEIARLWMAMLGTEMQGPAM------QQAM 335 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 E R T LS R L R +R + FEQ ++L PT Sbjct: 336 ALADEPLRRSQALTAGLSPRLSAEEMLAGFTARATYQRAWQLFFEQ-YPLLLLPTAWALP 394 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVN-MAGLPAISVPAALCEKKMPLGLQLIGQPFREET 472 FP+G + I V G+PAISVP + +P+G+QL+G FR+ Sbjct: 395 FPVGHDTVGESEALEILRAHSPCCVTAFLGVPAISVP--VVRAPLPIGIQLVGARFRDGL 452 Query: 473 LFSVGQIIEKEAGYFRP 489 + + + + G P Sbjct: 453 CLTAAEALGRRIGPILP 469 >gi|171683744|ref|XP_001906814.1| hypothetical protein [Podospora anserina S mat+] gi|170941832|emb|CAP67485.1| unnamed protein product [Podospora anserina S mat+] Length = 612 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 141/292 (48%), Gaps = 19/292 (6%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKD 80 ++AV+LV+ Y Q + ++ +N+ +E AA +R + GIP +K+ Sbjct: 100 VTAVQLVECYAQRVLQTDDYINSLLEFNPDALDIAANLDRERRAGKVRGPMHGIPFTVKE 159 Query: 81 CFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFA-MGSSNETSYY 138 TK + T A S L G R ++ V +KL + G V+LGK + E+A M S+N + Y Sbjct: 160 NIGTKDKMETTAGSWALLGSRVPRDAFVVKKLREAGGVLLGKATLSEWADMRSNNYSEGY 219 Query: 139 ----GPVISPWRSMDSTDKFT--PGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 G SP+ FT PGGSS GS+ VA A S+GT+T GS+ PA Sbjct: 220 SARGGQARSPY-------NFTVNPGGSSSGSAIGVAANAVAVSLGTETDGSVINPAMRNS 272 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP- 251 VG KPT G SR G++ D G R+VRD+ L AI G D+ D + P Sbjct: 273 VVGFKPTVGLTSRAGVVPETEHQDTVGTFGRSVRDAVYTLDAIYGKDQRDNYTLAQQSPR 332 Query: 252 -DYERAL--DQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIV 300 Y + L ++++G G+P + + P + + +K+AGA I+ Sbjct: 333 GGYTQFLTNKRALRGAAFGLPWQCFWRHADPEQLRQLTALLDLIKEAGATII 384 >gi|254177100|ref|ZP_04883757.1| amidase family protein [Burkholderia mallei ATCC 10399] gi|160698141|gb|EDP88111.1| amidase family protein [Burkholderia mallei ATCC 10399] Length = 623 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 239 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 298 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 299 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 358 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 359 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 416 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 417 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 460 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 461 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 508 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 509 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 563 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 564 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 616 >gi|307725600|ref|YP_003908813.1| Amidase [Burkholderia sp. CCGE1003] gi|307586125|gb|ADN59522.1| Amidase [Burkholderia sp. CCGE1003] Length = 470 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 109/427 (25%), Positives = 182/427 (42%), Gaps = 59/427 (13%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G+PI KD F G T A S + P ++ + G V +GK N+ EFA Sbjct: 83 LDGVPIAWKDLFDVAGSVTTAGSALYRERAPATGDAPLVAAAARAGLVCIGKTNLSEFAY 142 Query: 130 GSSNETSYYGPVISPWRSMDSTD--KFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 ++G +P D PGGSS G++ AVA + ++GTDT GSIR P Sbjct: 143 SGLGLNPHFGTPFNPAFDASVADGGHRVPGGSSSGAAVAVATGVVPIAVGTDTAGSIRVP 202 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A+F G VG + + R ++ G+I + S D G + R+V D A + G Sbjct: 203 AAFNGLVGYRASRARYAQQGMIGLSQSADTCGPLARSVADCAAFDAVVGGR--------- 253 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPH 306 D RALD ++G +P ++L + ++ + + + ++ L DAGA++ E+ Sbjct: 254 ----DLHRALDD-LRGQRFVVPTGWQLRFAVTEAVGADFMRFVARLSDAGARVDEVK--- 305 Query: 307 TQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI-------GFGQEV 359 + +A+ +L G +G LE +E R + Q V Sbjct: 306 ----------VGAFDAACDLIATRG-WFG-------SLEAFERYRRVLDSDAAACIDQRV 347 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 + R+ + V +SR + RAR I E G +L PT P A Sbjct: 348 RTRLEMSRDVPASRLAELLEARARLIGQF-------GAELGDATLLLPTVPHVAPECAPL 400 Query: 420 ENNSGSMGHIYNDVFTVAVNMAG----LPAISVPAALCEKKMPLGLQLIGQPFREETLFS 475 E + + ++ T+++ M G PA ++PA +P +QL+ ++ L + Sbjct: 401 EADPERFARV--NLATLSMTMPGSFLDTPAFAMPAGADAAGLPTSVQLMRAQNDDDALIA 458 Query: 476 VGQIIEK 482 + +E+ Sbjct: 459 LALTVER 465 >gi|171316153|ref|ZP_02905377.1| Amidase [Burkholderia ambifaria MEX-5] gi|171098662|gb|EDT43457.1| Amidase [Burkholderia ambifaria MEX-5] Length = 458 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 14/233 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +LDG P ++ +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLDGAPPAQADAVAVARLKRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+R D GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 134 SGLGLNPHFGTPRSPYRRDVPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRIPTQGGVPLSTTLDSFGPIGLTVACCALVDRMLAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI 302 P A + ++G+ +G+ Y D + + + L+ AGA + E+ Sbjct: 244 -PHVPAA--RPLEGVRLGVLTNYVTDGVDADVAAALDASLKHLEAAGAIVTEV 293 >gi|228477386|ref|ZP_04062022.1| amidase [Streptococcus salivarius SK126] gi|228250821|gb|EEK10009.1| amidase [Streptococcus salivarius SK126] Length = 483 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 133/512 (25%), Positives = 233/512 (45%), Gaps = 90/512 (17%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 + +++K +S ELV++ I+ E +N ++NA +V+Q+ A EE++ R + + G Sbjct: 14 EAVQNKTVSPRELVEATIREAERTNPKINA---IVSQRYEKAIEEAETRDFSD--KPFAG 68 Query: 74 IPIGIKDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI +KD + G + A S + +R +KL + G ++LG+ + EF + Sbjct: 69 VPIFLKDLGQEQAGEPSTAGSRLFTSYRAKESDNYVKKLEELGFIILGRSSTPEFGFKNI 128 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 ++ +GPV P D + G S G ++ +G + + +D GGSIR PASF G Sbjct: 129 SDAQIHGPVNLP----DDVTRNAGGSSGGAAALVSSG-ISPLAPASDGGGSIRIPASFNG 183 Query: 193 TVGIKPTYGRCSRLGIISF----APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 +G+KPT GR +G SF S+ A +T+TVRD+ LL + C + Sbjct: 184 LIGLKPTRGRIP-VGPSSFRGWQGASVQFA--LTKTVRDTKRLLYHM---QTCQMESPFI 237 Query: 249 PVPDYER-ALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHT 307 +P + +L++ ++ + + +SP K + I+ K A A+ +E SL H Sbjct: 238 -LPKLSKVSLEEPVRPLKIA------FSTVSPIGGKVSESAIAATKMA-ARTLE-SLGHH 288 Query: 308 QY-----------ALPAYYIISPAEASSNLARYDGVRYGL--RVEGKDILEMYENTRSI- 353 + A+ +YYI++ E + A +D + GL ++ +D+ M T +I Sbjct: 289 VHEIIDQPLNGVEAMQSYYIMNSVETA---AMFDSIEAGLGHQMTPEDMELM---TWAIF 342 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 GQ++ ++ + VL+ SH + F Q DV+LTPT A Sbjct: 343 QSGQKIPAKVY--SKVLAQWDQYSHQM--------------AHFHQTYDVLLTPTVAEVA 386 Query: 414 FPLGK---EENNSGSMGHIYN--------------------DVFTVAVNMAGLPAISVPA 450 G+ E+ + H+ + FT N+ G P+IS+P Sbjct: 387 PKHGQFALSESLQNQLKHMADFAWPKQQELIWEMFADSLDWTPFTQQANLTGQPSISLPV 446 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 E+ + LG+QL RE+ L + Q +E+ Sbjct: 447 YRDEQGLSLGVQLTAAKGREDLLLHLAQQMEE 478 >gi|213965390|ref|ZP_03393586.1| glutamyl-tRNA [Corynebacterium amycolatum SK46] gi|213952006|gb|EEB63392.1| glutamyl-tRNA [Corynebacterium amycolatum SK46] Length = 462 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 104/382 (27%), Positives = 161/382 (42%), Gaps = 67/382 (17%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ------MNAYIEVVAQKARA- 54 SE+ A++E+ +RS IS E+V + +++ + + E +AR+ Sbjct: 5 SEMPARALTEA---VRSGAISVSEIVSEFATLADDAATNPARFGIATSLAEHAVDRARSL 61 Query: 55 -AAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWD 113 A E +R +G RDL G+P+ IKD F G+ S L F S KL Sbjct: 62 TAQSEISRRASHGLPRDLLGLPVAIKDLFTITGVKCTMGSANL-AFTATETSEPVAKLLA 120 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPW-------RSMDSTDKFTPGGSSGGSSAA 166 GA++ + E M + E Y +P+ + T TPGGSSGGS+ A Sbjct: 121 RGAILTSTTHTSEVGMTAYTEPIGYPAPENPYFAAPNQLSNQPDTTPRTPGGSSGGSAVA 180 Query: 167 VAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVR 226 VA + A++G+D GGSIR PA+ G VG+KP + +L +TRTV Sbjct: 181 VATGVVPAALGSDGGGSIRVPAACCGLVGLKPAHDIAGG--------NLSTPAFLTRTVD 232 Query: 227 DSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI---PKEYRLDYLSPTIDK 283 D+A+L +P+ A +S + + +G+ P +D +DK Sbjct: 233 DAALL--------------AGVPLSATPHAFRRSQRPLRIGVTVSPFHAEVD-----VDK 273 Query: 284 TWQQGISW-----LKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV 338 W G +W L DAG +VE+ P+ + I R R ++ Sbjct: 274 RWANG-AWAAADRLADAGYDVVEVPSPYDPAGPDVFEIF----------RRTITRMATKL 322 Query: 339 EGKDILEMYENTRSIGFGQEVK 360 D E+ E R+ GQE+ Sbjct: 323 PRADYSEIVEWIRAC--GQEIS 342 >gi|119713640|gb|ABL97691.1| amidase [uncultured marine bacterium EB0_39H12] Length = 461 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 19/268 (7%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ELN + SE + +++K++S+ E+V +++ I N ++NA V+ + A AE++D Sbjct: 1 MNELNQKSASELANLIQNKEVSSKEVVQAHLDRIHEVNPEINAVTVVLEESALEMAEKAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 + R G+PI IK+ G T +L P + + ++ + GA+ +G Sbjct: 61 SSGADTKDRPFHGVPITIKENIDFVGTPTTNGLPLLAESMPPRNTPLVDRMLNAGAIPIG 120 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 + NM E M + G +PW TPGGSSGG AA+A + IG D Sbjct: 121 RTNMPEMGMRLDTDNPLRGRTFNPWNK-----AVTPGGSSGGEGAAIASGMSPFGIGNDI 175 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQA--------GIITRTVRDSAILL 232 GGS+R PA G IKP+ GR + I AP D G + R+V+D + L Sbjct: 176 GGSLRNPAYCCGITSIKPSIGRIPFVRTI--APFEDMGISSAFLSDGPMARSVKDLRMGL 233 Query: 233 KAIAGYDECDATCVNLPV----PDYERA 256 ++G D ++ P+ PD RA Sbjct: 234 SVMSGRHIDDPQSIDSPLIGDFPDKPRA 261 >gi|66044783|ref|YP_234624.1| amidase [Pseudomonas syringae pv. syringae B728a] gi|63255490|gb|AAY36586.1| Amidase [Pseudomonas syringae pv. syringae B728a] Length = 446 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 50/421 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD +G+ A + + GF ++ + +L GAV+ GK NM E + G Sbjct: 63 LWGVPVSFKDNICVRGLPLTAGTRGMSGFIADQDAAIVSQLKALGAVVAGKNNMHELSFG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ++G V +P + GGSSGGS+AAVA + S+GTDTGGSIR PA+F Sbjct: 123 VTSINPHWGAVGNP-----VAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAF 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G +PT GR S GII + + D G++TRT D+ + ++G + P Sbjct: 178 CGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSGKQQSFPLSRTGPC 237 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI------SL 304 +G+P D L +++ +S L+ G + VEI L Sbjct: 238 --------------RIGLPVSMWSD-LDGEVERACVNALSLLRKTGFEFVEIDDADIVEL 282 Query: 305 PHT-QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 T + +P Y + A++ +L G+ + I ++ G + H Sbjct: 283 NQTLTFTVPLYEFFADFAQSLLSLGWKHGIHH--------IFAQVDDANVKGI---INHH 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEEN 421 + G +HYL + + L+KR E F + ++ PT P L + Sbjct: 332 LGEGAI------KPAHYLSSLQNGELLKRKMDELFARHHIKLLGYPTVPCRVPHLDHADR 385 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I N T + A LP+I++P E ++P+GL R+ L S +IE Sbjct: 386 PEFFSQAIRN---TDLASNAMLPSITIPVG-PEGRLPVGLSFDAPRARDAFLLSNVSLIE 441 Query: 482 K 482 K Sbjct: 442 K 442 >gi|330898528|gb|EGH29947.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 414 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+PI KD F G T A + + P ++ L +G V LGK N+ EFA Sbjct: 31 DGVPIAWKDLFDVAGSVTTAGAAVRTSLSPALLDAPTVGLLARSGMVSLGKTNLSEFAYS 90 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G ++P S DS+ + PGGSS GS+ AVA ++GTDT GSIR PA+ Sbjct: 91 GLGLNPHFGTPVNP--SSDSSPR-VPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 147 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 148 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 188 >gi|298485604|ref|ZP_07003684.1| indoleacetamide hydrolase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159847|gb|EFI00888.1| indoleacetamide hydrolase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 446 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 50/421 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD +G+ A + + GF ++ + +L GAV+ GK NM E + G Sbjct: 63 LWGVPVSFKDNICVRGLPLTAGTRGMSGFIADQDAAIVSQLKALGAVVAGKNNMHELSFG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ++G V +P + GGSSGGS+AAVA + S+GTDTGGSIR PA+F Sbjct: 123 VTSINPHWGAVGNP-----VAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAF 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G +PT GR S GII + + D G++TRT D+ + ++G + P Sbjct: 178 CGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSGKQQSFPLSRTGPC 237 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI------SL 304 +G+P D L +++ +S L+ G + VEI L Sbjct: 238 --------------RIGLPVSMWSD-LDGEVERACVNALSLLRKTGFEFVEIDDADIVEL 282 Query: 305 PHT-QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 T + +P Y + A++ +L G+ + I ++ G + H Sbjct: 283 NQTLTFTVPLYEFFADFAQSLLSLGWKHGIHH--------IFAQVDDANVKGI---INHH 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEEN 421 + G +HYL + + L+KR E F + ++ PT P L + Sbjct: 332 LGEGAI------KPAHYLSSLQNGELLKRKMDELFARHHIKLLGYPTVPCRVPHLDHADR 385 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I N T + A LP+I++P E ++P+GL R+ L S +IE Sbjct: 386 PEFFSQAIRN---TDLASNAMLPSITIPVG-PEGRLPVGLSFDAPRARDAFLLSNVSLIE 441 Query: 482 K 482 K Sbjct: 442 K 442 >gi|255730939|ref|XP_002550394.1| multifunctional urea amidolyase [Candida tropicalis MYA-3404] gi|240132351|gb|EER31909.1| multifunctional urea amidolyase [Candida tropicalis MYA-3404] Length = 1815 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 113/438 (25%), Positives = 191/438 (43%), Gaps = 45/438 (10%) Query: 43 AYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH 102 A +E + + + +S+KR + L G+PI +KD K T A + P Sbjct: 47 ASLENLEHQWKFLQSKSNKRDL-----PLYGVPIAVKDNIDAKYFETTAACPSF-AYSPQ 100 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGG 162 ++T + L + GA+++GK N+D+FA G S YG I+P + +S K+ GGSS G Sbjct: 101 QDATTVRLLREAGAIIIGKTNLDQFATGLVGTRSPYG--ITP-NTFNS--KYVSGGSSAG 155 Query: 163 SSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIIT 222 S++ VA + ++GTDT GS R PA+ +G+KPT G S G++ SLD I Sbjct: 156 SASVVARGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGVFSCSGVVPACKSLDCVSIFA 215 Query: 223 RTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTID 282 ++D+ + +A D+ D ++P E L + + +P L Y Sbjct: 216 LNLQDAQLTFNIMAQEDDDDEFSRSMP----ENPLLKFPAKPRIVVPTNL-LWYGEEENP 270 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLR-VE 339 K +++ + + G ++V + + E LAR Y+G R V Sbjct: 271 KIYRKAVEEFEKIGCELVSLDI----------------EPLLELARCLYEGPWVTERWVA 314 Query: 340 GKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ 399 KD L N V I G ++ ++ Y R R ++ + K + Sbjct: 315 CKDFLST--NPPEKDLDPTVMKIIKGGENYTAATAFEFEYKRQRILKKVTK------LLK 366 Query: 400 GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPL 459 G D I+ PT P + P ++ + Y +T VN+A + A+++PA +P Sbjct: 367 GTDAIIVPTAPLN--PTIEQVTKEPIKVNSYQGTYTNFVNLADMSALAIPAGFRSDGLPF 424 Query: 460 GLQLIGQPFREETLFSVG 477 G+ L+ F + L + Sbjct: 425 GITLLSDKFNDYALLELA 442 >gi|86355877|ref|YP_467769.1| amidase [Rhizobium etli CFN 42] gi|86279979|gb|ABC89042.1| glutamyl-tRNA amidotransferase subunit A protein [Rhizobium etli CFN 42] Length = 463 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 130/498 (26%), Positives = 210/498 (42%), Gaps = 59/498 (11%) Query: 1 MSELNFMAVSESRDRLRSKDISAVEL---VDSYIQAIENSNSQMNAYIEVVAQKARAAAE 57 M+E + + + E R R K +S +E ++ ++ A E S S + Y + AR A+ Sbjct: 1 MAETD-LTIRELRRRFADKSLSPLEYWLSLEDHVAAWEPSISALYLYD---PEAARVQAK 56 Query: 58 ESDKRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGA 116 S +R G L+GIP +K+ AT+G + ++ ++ +L ++GA Sbjct: 57 ASTERWAKGRTLGTLDGIPATLKELIATEGQPVPLGTRAVELKPAEADAPAAARLREDGA 116 Query: 117 VMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 V+ K ++ M SS +S++ +PW + PGGSS G++AA A I Sbjct: 117 VIFAKTTCPDYGMLSSGLSSFHPLSRNPWNIAQN-----PGGSSAGAAAAAAAGYGPLHI 171 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSL--DQAGIITRTVRDSAILLKA 234 GTD GGS+R PA +TG G KP++GR I P G +TRTV D+A + Sbjct: 172 GTDIGGSVRLPAGWTGIFGFKPSHGR------IPADPYYVGRCLGPMTRTVEDAAFSMAT 225 Query: 235 IAGYDECDATCVNLPVPDYERA-LDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWL 292 ++ D D T +LP D++ I GM +G+ + + + I + Sbjct: 226 LSRPDWRDGT--SLPPNDFDWMDFVVDISGMKIGLMLDAGCGFAVDDEIRVAVESAAKRF 283 Query: 293 KDAGAKIVEISLPHTQYALPAYYIISPAEASSNLA-----RYDGVRYGLRVEGKDILEMY 347 + AGA IV + T+ L A S++A R D + +R K ++ Sbjct: 284 EKAGATIVSVQPVLTRAMLDGLDTFWRARLWSDIAGLNEERRDSILPYIRDWAKAGADIS 343 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTP 407 GF Q ++ R G R FT VD +L+P Sbjct: 344 GVDAVRGFNQTIEMRRSCG------------------------RLFTR-----VDALLSP 374 Query: 408 TTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQP 467 T P ++P + + FTV NM+ PA S+ MP+GLQ++G Sbjct: 375 TNPIISYPAEWASPTNDPTRPFEHIAFTVPWNMSEQPAASINCGFSRSGMPIGLQIVGPR 434 Query: 468 FREETLFSVGQIIEKEAG 485 F + + + + E G Sbjct: 435 FDDMRVLRLSKAFEDWTG 452 >gi|310817194|ref|YP_003965158.1| amidase [Ketogulonicigenium vulgare Y25] gi|308755929|gb|ADO43858.1| amidase [Ketogulonicigenium vulgare Y25] Length = 442 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 117/452 (25%), Positives = 195/452 (43%), Gaps = 46/452 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E F ++ + + I V+L + Y++A N Y + + A + Sbjct: 1 MQEWLFAKAADLGRGIGAGKIDPVDLAECYLEAAANHPDAARIYARTAPDRTLSEAAAAR 60 Query: 61 KRIINGDAR-DLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 R + L+G+P+ KD +K I T+A + +++G P ++ V + +G V + Sbjct: 61 SRAQSSARLGPLDGVPVSWKDLIDSKDIATEAGTALMEGRTPSADAPVLAQGTSSGLVFM 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK ++ E A Y P+ + +++ D PGGSS G++A++A L A +IG+D Sbjct: 121 GKTHLSEIAFSGLG----YNPITATPPNINGPD-LVPGGSSSGAAASLAYGLAAGAIGSD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 TGGSIR PA++ G VG KP +G GI+ D G + R+V D+A+L A+ G Sbjct: 176 TGGSIRLPAAWNGLVGFKPAHGAHPLEGIVPLCRRFDTIGPLARSVEDAALLDAALGG-- 233 Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299 V+L S+ G + + + L P + ++Q + L AGA+I Sbjct: 234 ----AAVDLS--------GASLHGTRLAVMDTVVGEGLEPAVSMAFEQALDRLARAGAQI 281 Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV 359 I LP A P ++ EA + Y K ++YE I GQ+V Sbjct: 282 TRIVLPEVAAAYPLAALLYAPEAWAYWRDYI-----TPAPHKMFDQIYER---ISAGQQV 333 Query: 360 KHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKE 419 I + + H LR R + A G D IL P P +A + + Sbjct: 334 AAPDYIAAW------DELHALR---------RTYASA-TAGYDAILCPAAPITAPSISRL 377 Query: 420 ENNSGSMGHIYNDVF--TVAVNMAGLPAISVP 449 ++S + T N+ GL ++++P Sbjct: 378 TSDSAYYKQVNLQALRNTRLANLFGLASVNLP 409 >gi|71029776|ref|XP_764531.1| glutamyl-tRNA amidotransferase subunit A [Theileria parva strain Muguga] gi|68351485|gb|EAN32248.1| glutamyl-tRNA amidotransferase subunit A, putative [Theileria parva] Length = 470 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 99/385 (25%), Positives = 176/385 (45%), Gaps = 49/385 (12%) Query: 46 EVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYES 105 +VV R AEE DK L G+P+ IKD A KGI + + + P + + Sbjct: 89 QVVNLVERIKAEERDKI-------PLFGLPLAIKDNVAVKGIPLKNGATT-GPYEPSFTA 140 Query: 106 TVTQKLWDNGAVMLGKLNMDEFAMGSSNE--TSYYGPVISPWRSMDSTDKFTPGGSSGGS 163 T + L + G V++GK ++ F +G++ S YG +++ GGSSGGS Sbjct: 141 TAVESLINAGMVLVGKTKLNGFGLGANTTGVKSIYG------------EEYIVGGSSGGS 188 Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 AV G +IGTDTGGS+R PA+F VG +P+ G SR G+ + + D G IT Sbjct: 189 GVAVGGNSVTVAIGTDTGGSVRCPAAFCNAVGYRPSKGVVSRFGMHELSANFDTVGFITN 248 Query: 224 TVRDSAILLKAIAGYD------ECDATCV------------NLPVP-DYERALDQSIQGM 264 TV ++ L +GYD E D+ + NL +P D + L GM Sbjct: 249 TVYEAVYLAYFTSGYDIKDMLSEYDSNLIKQSFLALLHNFNNLKIPLDMWKGLKNVKIGM 308 Query: 265 TVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 + ++L ++ + + GA+++++++P YY+ + + ++ Sbjct: 309 -FDSEEIFKLGFIDEENKVNMENAARITSELGAEVIKLTIPPLDKLTAIYYLETAKQTTT 367 Query: 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARK 384 N+ R++ Y + + ++ + F + ++ R ++G YV S L+ ++ Sbjct: 368 NVRRFNQYPYSSN-KSTTVTDLV-----LSFEKRIQERFLLGEYVKLSEFNIEGLLKDQR 421 Query: 385 IRTLIKRDFTEAFEQGVDVILTPTT 409 + + + F + V+ +TP+T Sbjct: 422 EEMIKWVEENKLFSE-VEFFITPST 445 >gi|145594737|ref|YP_001159034.1| amidase [Salinispora tropica CNB-440] gi|145304074|gb|ABP54656.1| Amidase [Salinispora tropica CNB-440] Length = 484 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 13/244 (5%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI---- 63 ++ E+R + + VE V++ + A+ + + + A++ V +AR+ A+ +D+ I Sbjct: 28 SIRETRQLFLTGRSTVVEHVENVLTAVGDVDPTIGAFVAVADDRARSEADAADQLIGALG 87 Query: 64 -INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 + R L G+PI +KD T+ + T+ S +L RP ++ +L GA+++GK Sbjct: 88 EVAFRDRPLLGVPIAVKDLIQTRDLPTRRGS-LLPNRRPAVDAPAVARLRAAGAILVGKT 146 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 E+ +S + GP +PW + T GGSSGGS+AAVA L A++GTD G Sbjct: 147 ATSEYGWSASTVSRVAGPTRNPW-----APERTAGGSSGGSAAAVAAGLSTAAVGTDGAG 201 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 SIR PA+F G VG KP++GR + A L G + R V D L+ + G D D Sbjct: 202 SIRIPAAFCGVVGFKPSFGRVPY--VPPSAERLSHLGPLAREVADITALMAVLVGPDHRD 259 Query: 243 ATCV 246 V Sbjct: 260 PDSV 263 >gi|66047165|ref|YP_237006.1| hypothetical protein Psyr_3938 [Pseudomonas syringae pv. syringae B728a] gi|63257872|gb|AAY38968.1| Amidase [Pseudomonas syringae pv. syringae B728a] Length = 457 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+PI KD F G T A + + + P ++ L +G V LGK N+ EFA Sbjct: 74 DGVPIAWKDLFDVAGSVTTAGAAVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P + DS+ + PGGSS GS+ AVA ++GTDT GSIR PA+ Sbjct: 134 GLGLNPHFGTPINP--NSDSSPRI-PGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|153010121|ref|YP_001371335.1| amidase [Ochrobactrum anthropi ATCC 49188] gi|151562009|gb|ABS15506.1| Amidase [Ochrobactrum anthropi ATCC 49188] Length = 443 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 108/422 (25%), Positives = 180/422 (42%), Gaps = 52/422 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+ + +K CF T+G T S L + + + ++L GA +L + NM EFA Sbjct: 69 LAGLTMTVKACFDTEGWVTSCGSKALQEAAPASASAALVRRLRMGGATLLAQTNMTEFAY 128 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+ +++G +P +D + GGSS G++ AVA +I +DT GS R PA+ Sbjct: 129 GALGVNTHFG---TPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAA 185 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G VG KP+ GR G+ + S D GII+ +V ++ D +P Sbjct: 186 FCGVVGFKPSRGRYETDGMHWLSTSFDVPGIISTSVAHCRLI----------DDVATGIP 235 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 R+ + + + +P+ L T++ + S L+ AG + +I LP Sbjct: 236 ARKPRRS-----KQIRLAVPRLLSETALDNTVEDLFGACRSALEAAGIVVQDIELPS--- 287 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +I A + DG + G + ++ ++ F + ++GT + Sbjct: 288 ------LIESARIA-----VDG-----GMIGAEAYALHRERLAVDFDS---YDPLVGTRI 328 Query: 370 LSSRCYDSHYLRARKIRTLIK-RDFTEAFEQGVDVILTPTTPT---SAFPLGKEENNSGS 425 R + YL + L R+ +A +G D + PT P + L EE Sbjct: 329 QKGR-ENPAYLYVNALNALAACREQFDAEIEGFDGFILPTVPMLPPALATLADEETYLAL 387 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 ++ T N LP+IS+P K P GL L G +ETL ++ +++E A Sbjct: 388 NRRAFS--LTEFANRLDLPSISLPIG----KHPAGLMLTGLRGEDETLLAIAEVLEPLAA 441 Query: 486 YF 487 F Sbjct: 442 KF 443 >gi|330973045|gb|EGH73111.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 457 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+PI KD F G T A + + + P ++ L +G V LGK N+ EFA Sbjct: 74 DGVPIAWKDLFDVAGSVTTAGAAVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P + DS+ + PGGSS GS+ AVA ++GTDT GSIR PA+ Sbjct: 134 GLGLNPHFGTPINP--NSDSSPRI-PGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|171059532|ref|YP_001791881.1| amidase [Leptothrix cholodnii SP-6] gi|170776977|gb|ACB35116.1| Amidase [Leptothrix cholodnii SP-6] Length = 413 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 122/450 (27%), Positives = 198/450 (44%), Gaps = 59/450 (13%) Query: 45 IEVVAQKARAAAEESDKRIING-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRP-H 102 + V A+ +R AA +D+ ++ G DA L G+ + IKD F +G T+A S L +P Sbjct: 1 MAVDAEGSRQAAAAADRALLEGRDAGVLCGLAVSIKDLFDVQGQPTRAGSTWLGADQPAR 60 Query: 103 YESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYG-PVISPWRSMDSTDKFTPGGSSG 161 ++ +L GA ++G+ M EFA + G P + ++ D PGGS+ Sbjct: 61 ADAPAVARLRKAGAALVGRTQMTEFAFSGVGINPHSGTPANAAMAALGRPD-CVPGGSTS 119 Query: 162 GSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGII 221 G + +VA A++G+DTGGSIR PA+ G VG K T G + APS+D + Sbjct: 120 GGAVSVACGAAWAALGSDTGGSIRIPAALHGLVGYKNTQALTPLHGSVPLAPSMDTVCAV 179 Query: 222 TRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI 281 TR+VRD+ +L + +A A +++ + +G + + LD L + Sbjct: 180 TRSVRDAVLLHQVLAQRRVALA--------------GRTLSNLRLGWIRNHFLDGLDAEV 225 Query: 282 DKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYI---ISPAEA----SSNLARYDGVRY 334 + ++ + L AG ++ E+ + LPA I+ AEA + +LA + G Y Sbjct: 226 AQAFEASLGTLAAAGVQLKELRV-DALAELPALTEQGGITAAEAWAWHAPHLAAH-GHEY 283 Query: 335 GLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFT 394 RV G RI G + + + H R R I R Sbjct: 284 DPRVLG---------------------RIRRGASISAEQLAALHQRR----RAWITR--M 316 Query: 395 EAFEQGVDVILTPTTPTSA---FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 EA VD++L+PT P A PL ++ + + V VN+ AI++P Sbjct: 317 EAALADVDLVLSPTVPLIAPAMAPLLASDDEFFRVNALLLRNPAV-VNLLDGCAITLPCH 375 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + + P+GL L R++ L +E Sbjct: 376 -TQSQPPVGLMLWAPGGRDDLLLDAAGAVE 404 >gi|147861789|emb|CAN80905.1| hypothetical protein VITISV_016634 [Vitis vinifera] Length = 507 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 125/493 (25%), Positives = 205/493 (41%), Gaps = 63/493 (12%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAA--AEESDKRIINGDARDLEGIPIGI 78 +++ +LV+ Y+ I N + IEV A A+ K + G L GIPI + Sbjct: 49 LTSRQLVEFYLGKIHKLNPILRGVIEVNPDALLQADKADRERKAKLPGSLLGLHGIPILL 108 Query: 79 KDCFATK-GIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 KD ATK ++T A S L ++ V +KL GA++LGK ++ E E + Sbjct: 109 KDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSERGKAFLYEENL 168 Query: 138 YGPVISPWRSM------DSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 + W+ + TP GSS GS+ +VA L A S+GT+T GSI P+ Sbjct: 169 W----PRWKFLLFCIHNPYVLSATPCGSSSGSAISVAANLAAVSLGTETDGSILCPSHVN 224 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD----ATCVN 247 VGIKPT G SR G++ +P D G TV D+ +L I G+D D + Sbjct: 225 SVVGIKPTLGLTSRAGVVPISPRQDTVG----TVSDAVEVLDVIVGFDYRDEATRTSSKY 280 Query: 248 LPVPDYERALDQS-IQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL 304 +P Y++ L+ + ++G +GI + Y + S + + ++ L+ GA +V+ Sbjct: 281 IPQGGYKQFLNANGLKGKRLGIVRNPFYMFENGS-VLPQVFEHHFHTLRQGGAILVD--- 336 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRS--IGFGQEVKHR 362 H + A S E ++ A + + L K+++ T + I F + H Sbjct: 337 -HLEIANIDVIYGSSGEGAALEAEF---KISLNAYLKELVASPVRTLADVIAFNNKFSHL 392 Query: 363 IMIG-----TYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPL 416 I T++ + + K+ L + F + E +D ++TP + S Sbjct: 393 EKIKEYGQDTFLQAEATNGINKKTLLKLARLSRNGFEKLMKEHKLDALVTPGSNVSP--- 449 Query: 417 GKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + + G P ISVPA K +P G+ G E L + Sbjct: 450 --------------------VLAIGGFPGISVPAGYDSKGVPFGICFGGLKGSEPKLIEI 489 Query: 477 GQIIEKEAGYFRP 489 E+ +P Sbjct: 490 AYSFEQATKIRKP 502 >gi|302780896|ref|XP_002972222.1| hypothetical protein SELMODRAFT_11951 [Selaginella moellendorffii] gi|300159689|gb|EFJ26308.1| hypothetical protein SELMODRAFT_11951 [Selaginella moellendorffii] Length = 487 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 119/242 (49%), Gaps = 10/242 (4%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAE-ESDKRIINGDARDLEGIPI 76 ++ +++ +LV+ YI+ + + Q+ + IE+ + A + ++++ G L GIPI Sbjct: 17 ARGLTSRKLVELYIERVRRHDPQLKSIIELNPDVWKLADQADAERSAAGGYVGGLHGIPI 76 Query: 77 GIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS--- 132 +KD AT + T A S L E+ V L GA++ GK N+ E S Sbjct: 77 LLKDNIATADSLSTTAGSFALFPNTVKDEAFVVSLLRKAGAIIFGKANLSELMHFRSQLL 136 Query: 133 -NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFT 191 N S G S+DS P GSS GS+ AVA L + S+GT+T GS+ P+S Sbjct: 137 PNGFSPRGNQTKDPYSLDSD----PCGSSTGSAVAVAANLVSVSLGTETQGSLICPSSRN 192 Query: 192 GTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 V IKPT G SR G+I + + D G + +TV D+ + L I G D D +P Sbjct: 193 AVVSIKPTVGLTSRSGVIPISINFDTIGPMAKTVADAVLTLDKIVGSDPKDKATFACKLP 252 Query: 252 DY 253 DY Sbjct: 253 DY 254 >gi|167739684|ref|ZP_02412458.1| amidase [Burkholderia pseudomallei 14] Length = 389 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 177/423 (41%), Gaps = 43/423 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 5 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 64 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 65 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 124 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 125 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 182 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 183 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 226 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 227 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 274 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 275 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 329 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 330 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVEAVLA 386 Query: 486 YFR 488 R Sbjct: 387 TIR 389 >gi|1708376|sp|P52831|HYIN_PSESY RecName: Full=Indoleacetamide hydrolase; Short=IAH; AltName: Full=Indole-3-acetamide hydrolase gi|472561|gb|AAA17679.1| IAH [Pseudomonas syringae] Length = 446 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 186/421 (44%), Gaps = 50/421 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD +G+ A + + GF ++ + +L GAV+ GK NM E + G Sbjct: 63 LWGVPVSFKDNICVRGLPLTAGTRGMSGFIADQDAAIVSQLKALGAVVAGKNNMHELSFG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ++G V +P + GGSSGGS+AAVA + S+GTDTGGSIR PA+F Sbjct: 123 VTSINPHWGAVGNP-----VAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAF 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G +PT GR S GII + + D G++TRT D+ + ++G + + P+ Sbjct: 178 CGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSGKQQ------SFPL 231 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI------SL 304 +G+P D L +++ +S L+ G + VEI L Sbjct: 232 --------NRTGPCRIGLPVSMWSD-LDGEVERACINALSLLRKTGFEFVEIDDADIVEL 282 Query: 305 PHT-QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 T + +P Y + A++ +L G+ + I ++ G + H Sbjct: 283 NQTLTFTVPLYEFFADFAQSLLSLGWKHGIHH--------IFAQVDDANVKGI---INHH 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEEN 421 + G +HYL + + L+KR E F + ++ PT P L + Sbjct: 332 LGEGAI------KPAHYLSSLQNGELLKRKMDELFARHHIKLLGYPTVPCRVPHLDHADR 385 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I N T + A LP+I++P E ++P+GL R+ L S +IE Sbjct: 386 PEFFSQAIRN---TDLASNAMLPSITIPVG-PEGRLPVGLSFDAPRARDAFLLSNVSLIE 441 Query: 482 K 482 K Sbjct: 442 K 442 >gi|255957107|ref|XP_002569306.1| Pc21g23390 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591017|emb|CAP97236.1| Pc21g23390 [Penicillium chrysogenum Wisconsin 54-1255] Length = 507 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 132/511 (25%), Positives = 225/511 (44%), Gaps = 60/511 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRI--- 63 M +S+ LR+ +LV Y++AI N + A I + + A E++ + + Sbjct: 11 MTISKFHQLLRTDPSIGPKLVTKYLEAIMQHNGTLKALITINSAALETAIEKATETLTYN 70 Query: 64 -INGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 N L +PI +KD ++T + T A L R +S V +L GA++L K Sbjct: 71 QTNKPFPPLHSVPIILKDNYSTADLPTSAGVQALQNLRTKDDSEVVSQLRAAGAIILAKA 130 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 N+ EFA+ +S G ++P+ D T GSSGG+ AA+A L A GTDT Sbjct: 131 NLHEFALQGITLSSLGGQTLNPY---DKTRTPG--GSSGGTGAALAANLGLAGCGTDTMN 185 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECD 242 S+R PAS G VG +P+ GR S +GI+ + + D AG + R+V D IL + G D D Sbjct: 186 SLRSPASACGIVGFRPSTGRVSCVGIVPVSQTQDVAGPMGRSVGDVRILYGVMKGLDGGD 245 Query: 243 ATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTI--DKTWQQGISWLKDAGAKIV 300 + + +++ ++ + + +GI + Y P I D T + +I+ Sbjct: 246 GDAMEV-----SKSIPRTGRQVRIGILEA----YFQPEIHADGTAEAEYIAENQVVQEII 296 Query: 301 EISLP--HTQYALPAYYIISPAEAS-----SNLARYDGVRYGLRVEGKDILE-------M 346 SL Q A + I+P+ + + A+ D + + + L+ Sbjct: 297 RSSLDSIQEQDANITFVPIAPSSHADWSYGTLFAKGDTQAFEFKHYLDEFLQSALVSSTQ 356 Query: 347 YENTRSIGFGQEVKHRIMIGTYVLSSRCYD-------SHYLRAR-KIRTLIKRDFTEAFE 398 + + SI E + M T+V S+ D S R+R + +K E F+ Sbjct: 357 HRSLESIAQSGEFDLQAM--THVFSAALEDPETFSLTSEAYRSRLEFIAALKESVKECFD 414 Query: 399 Q-GVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKK- 456 + +D ++ P +G ++ SG G V + G PAI +PA K Sbjct: 415 RYNIDALVYPHQTQLPVKIGAKQ-QSGRNG--------VLAALTGRPAICIPAGWSPKTA 465 Query: 457 -----MPLGLQLIGQPFREETLFSVGQIIEK 482 +P+GL+L+G+ + ++ L + + E+ Sbjct: 466 SSVLGVPVGLELMGRRWEDDELLDIAERAER 496 >gi|167912031|ref|ZP_02499122.1| amidase [Burkholderia pseudomallei 112] Length = 396 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 177/423 (41%), Gaps = 43/423 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 12 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 71 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 72 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 131 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 132 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 189 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 190 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 233 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 234 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 281 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 282 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 336 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 337 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVEAVLA 393 Query: 486 YFR 488 R Sbjct: 394 TIR 396 >gi|146282367|ref|YP_001172520.1| allophanate hydrolase [Pseudomonas stutzeri A1501] gi|145570572|gb|ABP79678.1| amidase family protein [Pseudomonas stutzeri A1501] Length = 600 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 128/474 (27%), Positives = 203/474 (42%), Gaps = 50/474 (10%) Query: 20 DISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA---RDLEGIPI 76 D + +L+ + N + NA+I ++ AA E ++G L GIP Sbjct: 20 DTTPRQLIIALRDKAAGLNPEFNAFIHLMT----AAELEPYLAALDGKTPAELPLYGIPF 75 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IKD G+ T A + P +T+ ++L GAV LGK N+D+FA G + S Sbjct: 76 AIKDNIDLAGVPTTAACPAF-AYTPETSATIVEQLIALGAVPLGKTNLDQFATGLNGTRS 134 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YG R+ D + GGSS GSS AVA LC+ ++GTDT GS R PA+ VG+ Sbjct: 135 PYGEC----RNSVHPD-YPSGGSSAGSSLAVALGLCSFALGTDTAGSGRVPAALNNLVGL 189 Query: 197 KPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 K + G S G++ +LD T T +++ LL D D + P+ + A Sbjct: 190 KASKGLISTAGVVPACRTLDCVTFFTATAAEASQLLALTTRLDPRDEYSRSNPLWNDGSA 249 Query: 257 LDQSIQGMTVGIPKEYRLDYLSPTIDKT-WQQGISWLKDAGAKIVEISL-PHTQYALPAY 314 Q I+ GIP+ L++L + I LK G + VE+ P + A Y Sbjct: 250 FGQ-IKTFRFGIPQH--LEFLGCAESAALFAATIEQLKALGGEPVEVDFAPFLEAARLLY 306 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRC 374 E RY V G I + + + +K + + + Sbjct: 307 ------EGPWVAERYS-------VAGALIEQQPDAVLPV-----IKAVLEKAPGTTAVQL 348 Query: 375 YDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP---TSAFPLGKEENNSGSMGHIYN 431 + + Y R + ++ + R E VD +LTP P T A + + +G+ Sbjct: 349 FQAQY-RLQHLKAVCDRTMAE-----VDCVLTPAYPRPVTLAELHAEPVKRNSDLGY--- 399 Query: 432 DVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG 485 +T +NM A++VPAA +P G+ L G+ F ++ L S+ ++ + G Sbjct: 400 --YTNFMNMLDYAAVAVPAATMHNGLPWGVTLFGRVFTDQYLLSLADALQHQTG 451 >gi|297158094|gb|ADI07806.1| amidase [Streptomyces bingchenggensis BCW-1] Length = 498 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 141/522 (27%), Positives = 223/522 (42%), Gaps = 77/522 (14%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+ + +SE L ++S+ LV+ + I + +NA+ V A+ A A+++D Sbjct: 1 MTSVIPKGLSEQVRALAGGEVSSRALVERALDRIAGTQGTLNAFRRVRAEAALREADDAD 60 Query: 61 KRIINGDARDLEGIPIGIKDCFATKGIHTQ--ACSHILDGFRPHYE-STVTQKLWDNGAV 117 + + G L G+PI +KD G T C F P E S V ++L GAV Sbjct: 61 RLLAAGRRLPLLGVPIAVKDDTDVAGEPTAFGCCGE----FPPKTEDSEVVRRLRAAGAV 116 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 ++GK N E E +G +PW +TPGGSSGG++AAVA L A++G Sbjct: 117 IVGKTNTPELGQWPFTEGPAFGVTRNPW-----NPDYTPGGSSGGAAAAVAAGLVPAALG 171 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 +D GS+R PA+++ +GIKP GR S + G + RTV D+A+LL A G Sbjct: 172 SDGAGSVRIPAAWSHLIGIKPQRGRISTWPYAEAFNGITCNGPLARTVEDAALLLHAATG 231 Query: 238 YDECDATCVNLPVP-DYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG 296 D ++ P P D A+ + + + + L P T + ++ A Sbjct: 232 NRPGD---LHQPPPVDVLSAVRRDPGRLRIAL-------SLKPPFTGTHKHLDPVVRAAV 281 Query: 297 AKIVE--ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG 354 ++ E +L H A Y G GL + ++ ++E Sbjct: 282 LRLAERLAALGHEVVAAEPRY---------------GAGVGLSFLPRAMVGLWE------ 320 Query: 355 FGQEVKHRIMIGTYVLSS----RCYDSHYLR-ARKIRTLIKRDFTEAFE---------QG 400 + V R ++ L++ R LR AR ++R F G Sbjct: 321 WSGHVPDRALLDVRTLTAVRHGRLLGGRPLRLARAAEEPLRRRVGAIFSRDGDRDGDGYG 380 Query: 401 VDVILTPTTPTSAFPLGK-EENNSGSMGHIYNDVFTVAV-------NMAGLPAISVPAAL 452 DV+L+PTT T +G E NS + D T+A N+ G PA++VPA Sbjct: 381 FDVVLSPTTATPPLRIGALAELNS-----WHTDRATIAACPYAWPWNVLGWPAVNVPAGF 435 Query: 453 C--EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 + +PLG QL+G E L S+ +E + ++ +W Sbjct: 436 VGEDGTLPLGAQLLGPANSEPRLISLAAQLEADQRWY--ERW 475 >gi|296160000|ref|ZP_06842820.1| Amidase [Burkholderia sp. Ch1-1] gi|295889746|gb|EFG69544.1| Amidase [Burkholderia sp. Ch1-1] Length = 459 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 83/255 (32%), Positives = 127/255 (49%), Gaps = 17/255 (6%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVT-QKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F +G T+A S +L VT +L GAV++G+ NM EFA Sbjct: 75 LAGIPVSVKDLFDIEGQPTRAGSIVLADAPAAKADAVTVARLKRAGAVLVGRTNMSEFAF 134 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG +SP+R D+ GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 135 SGLGLNPHYGNPLSPYRRGVKGDERISGGSSSGAAASVADGMAAIALGTDTGGSIRIPAA 194 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + Sbjct: 195 LCGLTGFKPTADRIPKQGGVPLSSTLDSFGPIGVSVACCALVDRMLAGLE---------- 244 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 P A + ++G+ +G+ + D + P + + L+ AGA + E+ Sbjct: 245 -PRIPAA--RPLEGVRLGVLTNFVTDGVEPAVAAAVDTALKHLEAAGAIVSEVRFAPLDR 301 Query: 310 ALPAY--YIISPAEA 322 LPA + SP EA Sbjct: 302 -LPAINRFGFSPIEA 315 >gi|111022264|ref|YP_705236.1| amidase [Rhodococcus jostii RHA1] gi|110821794|gb|ABG97078.1| probable amidase [Rhodococcus jostii RHA1] Length = 500 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 115/489 (23%), Positives = 220/489 (44%), Gaps = 59/489 (12%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKAR----AAAEESDKRIINGDARD- 70 ++S+++S ++++ +Y+ IE N +NA +VA + R A A E D+++ +G Sbjct: 41 IKSREVSCIDVMTAYLDHIELHNRSVNA---IVALRDRDQLLAEARERDRQLADGHYLGW 97 Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 + G P +KD A KG+ + S I + ++ GA+++GK N EF +G Sbjct: 98 MHGFPHAVKDLSAVKGLPFTSGSPIFADRIADADDLFVTRIRAAGAIIIGKTNTPEFGLG 157 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S +G +P+ + T GGSSGG++AA+A + + G+D GS+R P +F Sbjct: 158 SQTYNPVWGTTATPYDT-----SRTAGGSSGGAAAALALRMVPVADGSDYMGSLRNPPAF 212 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 VG +P++GR G ++ + G + R+V D LL +AG D ++ Sbjct: 213 NNVVGFRPSWGRIPEAGFVAQGAVV---GPMGRSVADVTHLLSTMAGPDANAPLGIDEDP 269 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLS--PTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 + R+LD+ G + ++ Y++ P + + + + G ++ + Sbjct: 270 EVFTRSLDRDFSGTRIAWVGDWG-GYMATEPGVLELCESAFEAFGNIGCRV--------E 320 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-----FGQEVKHRI 363 ALP Y P + R+ R+ ++ ++++Y + ++ F E++H I Sbjct: 321 AALPDY---KPEDIWQLFLRW---RWWAQL---GLVDLYNDPQTRAQMKPEFVWEMEHGI 371 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 + ++ RA R + T+ FE D IL P+ FP K + Sbjct: 372 ALSALDVT---------RAAAARNDWQAAVTKMFET-YDYILAPS--AQVFPFDKATHWP 419 Query: 424 GSMGHIYNDVF-----TVA-VNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ D + TVA MA LP ++P ++ +P+G+Q+IG+ + + + Sbjct: 420 TTIAGRPMDTYHRWMETVAPWTMASLPVAAMPVGFDDRGLPMGIQIIGRHGADRAVLQLA 479 Query: 478 QIIEKEAGY 486 E+ + Sbjct: 480 HAYEQATKW 488 >gi|315123426|ref|YP_004065432.1| amidase [Pseudoalteromonas sp. SM9913] gi|315017186|gb|ADT70523.1| amidase [Pseudoalteromonas sp. SM9913] Length = 501 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 23/305 (7%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGD- 67 +S+ + ++ +A +L +YI I N + NA I + A A++ D G Sbjct: 30 ISDIHNAYKNNTTTAEQLTRTYIDRINELNPKYNAVISI-EPTAIEQAKQLDALFKAGKW 88 Query: 68 ARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDE 126 A L GI + +KD T G + T A S L + ++ V ++L GA++LGK N+ E Sbjct: 89 AGPLHGIAVLLKDNIETTGTLPTTAGSLALKNNVTNKDAFVVKQLRQAGAIILGKANLSE 148 Query: 127 FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQ 186 +A S+ +S I P GSS GS+ AVA ++GT+T GSI Sbjct: 149 WANFRSSYSSSGWSAIGGQTHNAHDVTRNPCGSSSGSAVAVALNFAPIALGTETDGSITC 208 Query: 187 PASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCV 246 PAS G IKP+ G+ SR G+I + S D G + +++D+ +L I G D D + + Sbjct: 209 PASVNGVYAIKPSMGQVSRAGVIPLSSSQDSVGPMAHSLKDALAVLSVIQGEDSDDGSTL 268 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRL-------DYLSPTIDKTWQQGISWLKDAGAKI 299 N+ R LD GI + L + + K + + + LKDAG + Sbjct: 269 NV-----NRTLD--------GIAPKPSLRIGALPANKFTVATQKLYAKQLQTLKDAGHTV 315 Query: 300 VEISL 304 V +++ Sbjct: 316 VNVAV 320 >gi|294341654|emb|CAZ90073.1| putative amidase / 6-aminohexanoate-cyclic-dimer hydrolase [Thiomonas sp. 3As] Length = 501 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 138/524 (26%), Positives = 219/524 (41%), Gaps = 96/524 (18%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 +R+R + A E++ S I + N ++NA I + + A+A K GDA G Sbjct: 21 ERIRRGECDAAEVLLSAIARCDAINPRINAVIGDLREHAKAGL----KHARTGDA-PFAG 75 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDN-GAVMLGKLNMDEFAMGSS 132 +P +KD + + + RP ++ + W+ G ++ GK N E + + Sbjct: 76 VPFLLKDLSMDLAGYGTSQGNAALARRPVAQTDAVVRRWEQAGLLIFGKTNTPELGLKAI 135 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E +GP +PW ++D T SSGG++AAVA + A+ D GGSIR PA++ G Sbjct: 136 TEPVAFGPTRNPW-NLDHTPGG----SSGGAAAAVAAGIVPAAAAGDGGGSIRIPAAYCG 190 Query: 193 TVGIKPTYGRCSRLGIISFAPSLDQ-------AGIITRTVRDSAILLKAIAGYDECDATC 245 G+KP+ GR +S AP D+ I+RTVRDSA LL IAG + D Sbjct: 191 LFGLKPSRGR------VSCAPQFDEQWEGAVSTHTISRTVRDSAALLDVIAGPEPGDPFI 244 Query: 246 VNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSP---TIDKTWQQGISWLKDAGAKIVEI 302 V P + + L Q + + L SP +D W + S D G + + Sbjct: 245 VQPPARPFSQELQAPTQRLRIA------LSTASPIGGAVDAAWSRAAS---DCGQLLQSL 295 Query: 303 SLPHTQYALPAYYIISPAEASSNLAR-YDGVRYG--------LRVEGKDILEMYENTRSI 353 H ++ I P LAR Y + +G + +G +T+++ Sbjct: 296 GH-HVEW-------IDPVGDGMQLARDYLTMYFGQVAAQLTWWQQQGVPASAFETDTQAL 347 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 G + + G Y L+ ++S R + L R D+ LTPT Sbjct: 348 GL---IGRGLAAGDYALARARWNSPM---RALGQLFTR---------FDLYLTPTCAQPP 392 Query: 414 ---------------------FPLGKEENNSG-----SMGHIYNDVFTVAVNMAGLPAIS 447 F L SG + +++ FT N+ G PA+S Sbjct: 393 ARIGELAAPRWQRTALQLILRFGLDGVLRRSGLVEQLAFDNLHRTPFTQLANLTGTPAMS 452 Query: 448 VPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEA--GYFRP 489 VP AL + +P+G+Q RE+ LF + +E+E G++RP Sbjct: 453 VPWALDDNGLPVGVQFGAAWGREDLLFQLATQLEQERPWGHWRP 496 >gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] gi|161389366|gb|EDQ13718.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] Length = 468 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 130/248 (52%), Gaps = 9/248 (3%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M E F + + L+ K IS+ ELV +++ I N +NA + + A++A A+ +D Sbjct: 1 MQEWLFASAVQMAAALQRKTISSRELVTLHLEHISVVNPAINAIVTLAAERALEEAQVTD 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 +I G + L G+P+ IKD F T+GI + GF P+ ++TV +L GA++L Sbjct: 61 AQIAQGRFSGPLMGVPVTIKDSFDTEGIVSTYGMAARAGFVPNRDATVVARLRKAGAIVL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 GK N E +++ + P + + +P GSSGG++AAVA A IG+D Sbjct: 121 GKTNTSEL---TAHRAEHTNPPLHGRTNNPHDFARSPSGSSGGAAAAVAAGCAALDIGSD 177 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLG-IISFAPS----LDQAGIITRTVRDSAILLKA 234 TGGSIR PA G VGIKP+ G R G +S+ L Q G + R V D ++ L Sbjct: 178 TGGSIRDPAHVCGVVGIKPSAGLVPRTGHCVSYGLGTLDLLTQVGPMARYVEDVSLALSV 237 Query: 235 IAGYDECD 242 I+G D D Sbjct: 238 ISGPDGND 245 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 11/100 (11%) Query: 392 DFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAA 451 D+ E + D +L P +P +A + ++ +N++ A N++G PA++VPAA Sbjct: 373 DYMEKY----DALLGPVSPQAA----RLHADTPQGYSFWNEL--SAHNLSGFPAVTVPAA 422 Query: 452 LCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAG-YFRPH 490 +P+G+Q++ R+ +V + I+ F+P Sbjct: 423 RTSNGLPVGVQIVSTAGRDHVALAVAKAIQTRLNCTFKPQ 462 >gi|240278052|gb|EER41559.1| amidase [Ajellomyces capsulatus H143] Length = 564 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 138/568 (24%), Positives = 225/568 (39%), Gaps = 141/568 (24%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKR 62 ++ +++ + + L S+ S +L Y++ I N + A IE+ AA +R Sbjct: 21 DIEGLSIPQLQQCLESRKFSVYDLTACYLERIRRINGVLKAVIEINPDALDIAARMDCER 80 Query: 63 IINGDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 L GIP +KD +TK + T A S +L G ++ V L GAV+LG Sbjct: 81 NQGKHHGPLHGIPFLVKDTMSTKDKMQTTAGSSVLQGTVVPEDAHVVYLLRRAGAVLLGH 140 Query: 122 LNMDEFAMGSSNETSYY--------GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 N+ E+A S ++YY G +P+ + PGGSS GS+ AVA +CA Sbjct: 141 ANLSEWA---SMRSTYYSEGYSSRGGQCRNPYNLAEH-----PGGSSCGSAVAVASNMCA 192 Query: 174 ASIGTDTGGS----------------------IRQPASFTGTVGIKPTYGRCSRLGIISF 211 S+GT+T GS I PA G VGIKPT G + G+I Sbjct: 193 FSLGTETDGSVSILYSHPSKVMIEGIDDHSIQIMVPADRNGIVGIKPTVGLTNGKGVIPE 252 Query: 212 APSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP-- 269 + SLD G RTV D+AI L I D++ + P + ++++G G+P Sbjct: 253 SRSLDSVGTFGRTVLDAAIALDGIV-----DSSAI--PPCTSIVSGKETLRGAQFGLPWK 305 Query: 270 ---KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEIS-LPHTQYALP------------- 312 ++ + + + ++Q I ++ AGA ++E + P + +P Sbjct: 306 GVWEKASQNEAARKHYQIFEQVIERIRVAGANVIEYTDFPSAEEIIPPGGWDWDYPTKQG 365 Query: 313 ----AYYIISPAEASSNLARY---------------DGVRYGLR---------------V 338 + + + E ++L Y D V+Y R Sbjct: 366 HPEQSQFTVVKTEFYNDLKAYLGNLASNPNNINCLDDIVKYNERHAETEGGRPGVHPAWP 425 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 G+D EM +T+ + +H ++ Y+R RK R E Sbjct: 426 SGQDSFEMSLDTKGV-MDDTYRHAVV--------------YIR-RKSR-----------E 458 Query: 399 QGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA---GLPAISVPAALC-- 453 +G+D L+ K+ N + VA +A G P I++P + Sbjct: 459 EGIDAALST----------KDRNQLDGLLVPLQADGGVACQVAAKAGYPMITIPVGIATG 508 Query: 454 EKKMPLGLQLIGQPFREETLFSVGQIIE 481 E +P G+ +I +RE+ L G IE Sbjct: 509 ENDIPFGIGMIQTAWREDKLIRYGSAIE 536 >gi|254195676|ref|ZP_04902103.1| amidase family protein [Burkholderia pseudomallei S13] gi|254295599|ref|ZP_04963057.1| amidase family protein [Burkholderia pseudomallei 406e] gi|157805580|gb|EDO82750.1| amidase family protein [Burkholderia pseudomallei 406e] gi|169652422|gb|EDS85115.1| amidase family protein [Burkholderia pseudomallei S13] Length = 623 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 239 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 298 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 299 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 358 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 359 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 416 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 417 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 460 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 461 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 508 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 509 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 563 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 564 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 616 >gi|114049993|emb|CAK51010.1| putative amidase [Streptomyces ambofaciens] gi|114050215|emb|CAK51248.1| putative amidase [Streptomyces ambofaciens] Length = 469 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 131/495 (26%), Positives = 217/495 (43%), Gaps = 80/495 (16%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + +++ L ++++AVE V + AI + ++AY+ V +A AAE +D +I Sbjct: 6 IRRTKELLSRRELTAVEHVHQVLSAIRERD-HLDAYVAVAGDEALKAAEHADA-LIRERG 63 Query: 69 RD------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 R+ L G+ + +KD T+ + T S +L RP ++ +L GA+++GK Sbjct: 64 REAWWDLPLLGVTVSVKDLLQTRDLPTTRGS-LLPNTRPAQDAPAVARLRAAGAIVVGKT 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EF +S P +P+ + T GGSSGG++AAVA LC ++GTD G Sbjct: 123 STSEFGWSASTVGRVAPPTRNPYDP-----RLTAGGSSGGAAAAVAAGLCEGALGTDGSG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIAGY 238 SIR PA+F G VG KP+YGR + + P+ L G + +V D+A+L + IAG Sbjct: 178 SIRIPAAFCGVVGYKPSYGR------VPYYPNGADRLAHQGPLAASVADAALLGQVIAGP 231 Query: 239 DECDATCVNLPVPDYER-ALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D PD +LD + ++ + +G EY + P I + L D Sbjct: 232 HPTD--------PDSGLGSLDSPRDVRSLRIGW-IEY--EGTDPEIRRVTDAARDILLDE 280 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G + E+ + PA I A ++ + D E+ G Sbjct: 281 GHHVDEVEV-RCNNLYPAVVDILAANEAAGTSPQD-----------------EHLIDPGR 322 Query: 356 GQEVKH-RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V+H R + G V ++A +IR ++ + D++ T P F Sbjct: 323 LHVVRHGRTLSGVAV----------IQAEEIRQNLRATLRSVMDN-YDLLAMATVPVEPF 371 Query: 415 PLGKEENNSGSM-GHIYNDVFTVA-------VNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E + G D+ +A NM G PA S+PA L +P G+QL+G Sbjct: 372 ----EADAIGPQWAADARDLLWLAWAPASYPYNMTGQPAASLPAGLTSAGLPAGVQLVGP 427 Query: 467 PFREETLFSVGQIIE 481 ++ + +V + +E Sbjct: 428 VGADDLVLTVARRLE 442 >gi|172063473|ref|YP_001811124.1| amidase [Burkholderia ambifaria MC40-6] gi|171995990|gb|ACB66908.1| Amidase [Burkholderia ambifaria MC40-6] Length = 446 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 104/414 (25%), Positives = 170/414 (41%), Gaps = 41/414 (9%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G + +K CF +G T A S +L P ++ + L GAV++ + M EFA Sbjct: 66 LAGAVLTVKACFDCEGWVTHAGSRVLADEPPARTDAAMVSMLRRAGAVLVAQTAMTEFAY 125 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G+ YG +P +D+ + GGSS G++ +VA S+G+DT GS R PA+ Sbjct: 126 GALGVNRAYGTPTTP---LDARRERVAGGSSSGAAVSVALGAADLSLGSDTSGSARIPAA 182 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F G G KP+ GR + G+ + S D G++ TV + C V L Sbjct: 183 FCGVTGFKPSRGRYASDGMQYLSTSFDVPGLLAATV-------------ELCRQADVALH 229 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 D R +I+ + +P+ + D + P + + +S L GA+I L Sbjct: 230 GRDVRRRRPATIRDLQFVVPEPFATDDVDPVVAHAFDAWLSRLSAHGARIRRKRLDCV-- 287 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 AEA + +AR G+ E + R+ ++ ++G + Sbjct: 288 ----------AEAGA-VARAGGIIAA---------EAFMLHRARLATAADRYDPLVGARI 327 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + +H A +R D A D +LTPT P + + + + Sbjct: 328 AAGEQVRAHDYAAALLRLAALADTYHAELGDADAVLTPTVPRLPPRVADLADEAAYLEQN 387 Query: 430 YNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 T N LP+ISVP L + P+GL + G+ + L V ++E+ Sbjct: 388 ARAFRLTEFANRLDLPSISVPGDL-RNRQPVGLLITGRRHEDARLLDVATMVER 440 >gi|15966846|ref|NP_387199.1| amidase [Sinorhizobium meliloti 1021] gi|307301676|ref|ZP_07581435.1| Amidase [Sinorhizobium meliloti BL225C] gi|307316301|ref|ZP_07595745.1| Amidase [Sinorhizobium meliloti AK83] gi|15076118|emb|CAC47672.1| Putative amidase [Sinorhizobium meliloti 1021] gi|306898141|gb|EFN28883.1| Amidase [Sinorhizobium meliloti AK83] gi|306903374|gb|EFN33963.1| Amidase [Sinorhizobium meliloti BL225C] Length = 435 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 127/463 (27%), Positives = 203/463 (43%), Gaps = 64/463 (13%) Query: 12 SRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-D 70 SRDRL ++ + ++ + Y+++ + ARA A+ +D R G + Sbjct: 8 SRDRL-----------ETVLARLDGRRNDERVYVKLYPETARAEADAADGRRREGKSLGP 56 Query: 71 LEGIPIGIKDCFATKGIHTQACSHIL-DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L+G + IKD F G T A S I ++ + ++L GAV++GK +M EFA Sbjct: 57 LDGRIVSIKDLFDIAGEPTLAGSIIRRAAPPATADAAIVRRLRAAGAVIIGKSHMTEFAF 116 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 + +Y PV P ++D + PGGSS G++ + A +IG+D+GGS+R PA+ Sbjct: 117 TAVGLNPHY-PV--PGNAIDPS--LIPGGSSSGAAVSAAEGTSEIAIGSDSGGSVRIPAA 171 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G VG KPT R S G +PSLD G + RTV AG DA Sbjct: 172 LQGLVGFKPTARRISLEGAFPLSPSLDSIGPLARTV----------AGCAAADAVMAG-- 219 Query: 250 VPDYERALDQ-SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 D R L++ + G+ +GIP+ L+ L+P I +++ + AGAK+ + Sbjct: 220 --DTPRPLERMPLAGLKLGIPEGALLEGLAPEIAAAFERSLQAFSRAGAKLAACGIDD-- 275 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 L A + + A A +LA + R D L I ++ R+ + Sbjct: 276 --LLARF--AEATAIGSLAGLEASRV-----HADWLLDDNAPVDIRVRSTLRRRLTVPDA 326 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGV---DVILTPTTPTSAFPLGKEENNSGS 425 + LR R+ + A ++ + D+ L PTTP A + E + Sbjct: 327 AI------EDLLRTRQ-------ELMRAMDERLAPFDLTLLPTTPIPAVSIASVEEDRAE 373 Query: 426 MGHIYNDVF--TVAVNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 + + + T N L AIS+P A + P GL L+G+ Sbjct: 374 YRRVEDLLLRNTQVANQFDLTAISLPMAGTSR--PAGLMLMGR 414 >gi|154244332|ref|YP_001415290.1| amidase [Xanthobacter autotrophicus Py2] gi|154158417|gb|ABS65633.1| Amidase [Xanthobacter autotrophicus Py2] Length = 447 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 137/309 (44%), Gaps = 21/309 (6%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEES 59 M + A++E L S +A L ++ + I + + A++ V + A AA+ Sbjct: 1 MPQPTLAALAED---LASGRTTARALAEACLDRIADPAGEGARAFVSVNREGALKAAQAQ 57 Query: 60 DK-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPH-YESTVTQKLWDNGAV 117 D+ R GIPI +KD F G T A S +L P ++ +L G V Sbjct: 58 DELRQAGAAPSPFAGIPISVKDLFDVAGEVTAAGSKVLKDNAPATADAPAVARLRRAGFV 117 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LG+ M EFA +YG +P+ + GSS G + AVA + A++G Sbjct: 118 LLGRNTMTEFAYSGLGMNPHYGHPRAPFERAEGGRVSG--GSSSGGAVAVADGMAHAALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAG 237 TDTGGS R PA+F G G KPT R R G + +LD G I R+V + L AI Sbjct: 176 TDTGGSCRIPAAFCGITGYKPTASRVPREGAFPLSTTLDSIGPIARSVA-CCVALDAILS 234 Query: 238 YDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGA 297 E P P R ++G+ + +P LD L P + K ++ + L AGA Sbjct: 235 GSE--------PAPLAPR----PVKGLRLLVPTTVALDGLDPEVAKAFEAAVEALAHAGA 282 Query: 298 KIVEISLPH 306 IV P Sbjct: 283 HIVSAPFPE 291 >gi|107022100|ref|YP_620427.1| amidase [Burkholderia cenocepacia AU 1054] gi|116689045|ref|YP_834668.1| amidase [Burkholderia cenocepacia HI2424] gi|105892289|gb|ABF75454.1| Amidase [Burkholderia cenocepacia AU 1054] gi|116647134|gb|ABK07775.1| Amidase [Burkholderia cenocepacia HI2424] Length = 458 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 76/236 (32%), Positives = 116/236 (49%), Gaps = 14/236 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGF-RPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +LDG ++ +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLDGAPAARTDAVAVARLKRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+ D GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 134 SGLGLNPHFGNPRSPYHRDVPGDARISGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRIPTQGGVPLSTTLDSFGPIGLTVACCALVDRMLAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P A + ++G+ +G+ Y D + + + L+ AGA + E+ P Sbjct: 244 -PHVPAA--RPLEGVRLGVLTNYVTDGVDADVAAALDTALKHLEAAGAIVTEVRFP 296 >gi|116691611|ref|YP_837144.1| amidase [Burkholderia cenocepacia HI2424] gi|116649611|gb|ABK10251.1| Amidase [Burkholderia cenocepacia HI2424] Length = 466 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 125/492 (25%), Positives = 206/492 (41%), Gaps = 50/492 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60 M+EL ++ +E R+R +D+SA E+ D+ + ++ N +NA +E R A+E D Sbjct: 1 MTELWQLSATELAKRVRQRDVSAREVADAVLDRLDAVNPAINAVVEHRPDDVRRQADEVD 60 Query: 61 KRIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119 + I GD L G+P+ +K G T + + +S V + G V+L Sbjct: 61 RAIARGDDPGPLAGVPVTVKINVDQAGFATTNGTRLQRDLIARADSPVVANIRKAGGVLL 120 Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 G+ N FA+ +G +P TPGGSSGG++AAVA + ++GTD Sbjct: 121 GRTNSPTFALRWFTSNRVHGHTRNP-----RNPSLTPGGSSGGAAAAVAAGIGPLAVGTD 175 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISF-----APSLDQAGIITRTVRDSAILLKA 234 GGS+R PA G GI+P+ GR S A + AG I RT+ D ++ L+A Sbjct: 176 IGGSVRYPAYACGVHGIRPSLGRVPAFNASSPERAIGAQLMSAAGPIARTIDDLSLALRA 235 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 + D D +P E ++ G+ + P ++ + L D Sbjct: 236 FSAPDPRDPWHAAVPFDGREVPKRAALCVRPRGL-------EVVPEVEAALRDAARRLVD 288 Query: 295 AGAKIVEI--SLPHTQYAL--PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 AG + EI + P + AL ++ +A +N A DG V I + Sbjct: 289 AGWTVDEIDDTPPMREAALLQEQLWLGDGFDALANAAEQDGDPGAAAV----IAAVRSKV 344 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 R + +V R ++ RT + R + F V+L P + Sbjct: 345 RDL--PADVISRALVR-------------------RTTLTRQW-RLFLDEYPVLLLPVSS 382 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTV-AVNMAGLPAISVPAALCEKKMPLGLQLIGQPFR 469 FP + ++ T+ A+ GLP ++V +L +P+G+Q++ R Sbjct: 383 ELPFPDDLDRQGPEGFDRVWEAQLTLRALPAMGLPGLAVTTSLV-NGVPVGVQVVATHHR 441 Query: 470 EETLFSVGQIIE 481 E+ G+ IE Sbjct: 442 EDLCLLAGRDIE 453 >gi|330968877|gb|EGH68943.1| amidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 446 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 186/421 (44%), Gaps = 50/421 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+ KD +G+ A + + GF ++ + +L GAV+ GK NM E + G Sbjct: 63 LWGVPVSFKDNICVRGLPLTAGTRGMSGFIADQDAAIVSQLKALGAVVAGKNNMHELSFG 122 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++ ++G V +P + GGSSGGS+AAVA + S+GTDTGGSIR PA+F Sbjct: 123 VTSINPHWGAVGNP-----VAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAF 177 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G G +PT GR S GII + + D G++TRT D+ + ++G + + P+ Sbjct: 178 CGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSGKQQ------SFPL 231 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEI------SL 304 +G+P D L +++ +S L+ G + VEI L Sbjct: 232 --------NRTGPCRIGLPVSMWSD-LDGEVERACINALSLLRKTGFEFVEIDDADIVEL 282 Query: 305 PHT-QYALPAY-YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHR 362 T + +P Y + A++ +L G+ + I ++ G + H Sbjct: 283 NQTLTFTVPLYEFFADFAQSLLSLGWKHGIHH--------IFAQVDDANVKGI---INHH 331 Query: 363 IMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLGKEEN 421 + G +HYL + + L+KR E F + ++ PT P L + Sbjct: 332 LGEGAI------KPAHYLSSLQNGELLKRKMDELFARHHIKLLGYPTVPCRVPHLDHADR 385 Query: 422 NSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 I N T + A LP+I++P E ++P+GL R+ L S +IE Sbjct: 386 PEFFSQAIRN---TDLASNAMLPSITIPVG-PEGRLPVGLSFDAPRARDAFLLSNVSLIE 441 Query: 482 K 482 K Sbjct: 442 K 442 >gi|311106033|ref|YP_003978886.1| amidase [Achromobacter xylosoxidans A8] gi|310760722|gb|ADP16171.1| amidase family protein 8 [Achromobacter xylosoxidans A8] Length = 454 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 116/438 (26%), Positives = 194/438 (44%), Gaps = 65/438 (14%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 + IE N + A++ V A+ A A A E D+ +G R L+G+P+GIKD T + T+ Sbjct: 53 LDRIEERNGGVKAWVRVDAEGALARAREWDR---HGRRRALDGVPLGIKDTIDTAAMPTE 109 Query: 91 -ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 I G +P ++ V + + G +LGK + A+ GP +P Sbjct: 110 LGDPEIFPGRQPEADAPVVTQAQELGFNLLGKNTVSRHAI------MLPGPARNP----- 158 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 TP SS GS+AAVA F+ SIGT T GSI +P++F G VG KPT + I Sbjct: 159 HDLSRTPAASSAGSAAAVADFMAPLSIGTQTAGSILRPSAFCGAVGFKPTLDAIPYVSIR 218 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 ++ LD G I+R+V D+A+ ++A G P D +L + + V P Sbjct: 219 RYSRVLDVIGPISRSVADAALFMRAFTGD----------PRFDPASSLRSDFR-LGVWRP 267 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 K++ P + +++ + L AG K+ E+++P PA+ + EA + Y Sbjct: 268 KDWA--DTEPCMRDSFEANLRALSAAGVKVTELAMP------PAFDTMG--EAQDVIMAY 317 Query: 330 DGVRYGLRVEGKDILEMYEN--TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRT 387 D R ++ +D + + + G+ + G + C + Y AR+ Sbjct: 318 DLAREYAAIK-RDHAALCDPGLIEYLTMGEGLSAADYAGALDAADACRRAFYDVARE--- 373 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAIS 447 VD + P+T LG+ S + + ++++ N P+I+ Sbjct: 374 -------------VDAVAMPST------LGEAPPASSTGSSAFIRIWSLLHN----PSIT 410 Query: 448 VPAALCEKKMPLGLQLIG 465 +P A +PLG Q++G Sbjct: 411 LPVARGPNGLPLGFQMVG 428 >gi|302188198|ref|ZP_07264871.1| hypothetical protein Psyrps6_17715 [Pseudomonas syringae pv. syringae 642] Length = 457 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+PI KD F G T A + + + P ++ L +G V LGK N+ EFA Sbjct: 74 DGVPIAWKDLFDVAGSVTTAGAAVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P + DS+ + PGGSS GS+ AVA ++GTDT GSIR PA+ Sbjct: 134 GLGLNPHFGTPINP--NSDSSPRI-PGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|91199722|emb|CAI78077.1| putative amidase [Streptomyces ambofaciens ATCC 23877] gi|96771769|emb|CAI78351.1| putative amidase [Streptomyces ambofaciens ATCC 23877] gi|117164314|emb|CAJ87856.1| putative amidase [Streptomyces ambofaciens ATCC 23877] gi|126347426|emb|CAJ89134.1| putative amidase [Streptomyces ambofaciens ATCC 23877] Length = 469 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 131/495 (26%), Positives = 217/495 (43%), Gaps = 80/495 (16%) Query: 9 VSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA 68 + +++ L ++++AVE V + AI + ++AY+ V +A AAE +D +I Sbjct: 6 IRRTKELLSRRELTAVEHVHQVLSAIRERD-HLDAYVAVAGDEALKAAEHADA-LIRERG 63 Query: 69 RD------LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 R+ L G+ + +KD T+ + T S +L RP ++ +L GA+++GK Sbjct: 64 REAWWDLPLLGVTVSVKDLLQTRDLPTTRGS-LLPNTRPAQDAPAVARLRAAGAIVVGKT 122 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 + EF +S P +P+ + T GGSSGG++AAVA LC ++GTD G Sbjct: 123 STSEFGWSASTVGRVAPPTRNPYDP-----RLTAGGSSGGAAAAVAAGLCEGALGTDGSG 177 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPS----LDQAGIITRTVRDSAILLKAIAGY 238 SIR PA+F G VG KP+YGR + + P+ L G + +V D+A+L + IAG Sbjct: 178 SIRIPAAFCGVVGYKPSYGR------VPYYPNGADRLAHQGPLAASVADAALLGQVIAGP 231 Query: 239 DECDATCVNLPVPDYER-ALD--QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA 295 D PD +LD + ++ + +G EY + P I + L D Sbjct: 232 HPTD--------PDSGLGSLDSPRDVRSLRIGW-IEY--EGTDPEIRRVTDTARDILLDE 280 Query: 296 GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGF 355 G + E+ + PA I A ++ + D E+ G Sbjct: 281 GHHVDEVEV-RCNNLYPAVVDILAANEAAGTSPQD-----------------EHLIDPGR 322 Query: 356 GQEVKH-RIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 V+H R + G V ++A +IR ++ + D++ T P F Sbjct: 323 LHVVRHGRTLSGVAV----------IQAEEIRQNLRATLRSVMDN-YDLLAMATVPVEPF 371 Query: 415 PLGKEENNSGSM-GHIYNDVFTVA-------VNMAGLPAISVPAALCEKKMPLGLQLIGQ 466 E + G D+ +A NM G PA S+PA L +P G+QL+G Sbjct: 372 ----EADAIGPQWAADARDLLWLAWAPASYPYNMTGQPAASLPAGLTSAGLPAGVQLVGP 427 Query: 467 PFREETLFSVGQIIE 481 ++ + +V + +E Sbjct: 428 VGADDLVLTVARRLE 442 >gi|170734925|ref|YP_001774039.1| allophanate hydrolase [Burkholderia cenocepacia MC0-3] gi|169820963|gb|ACA95544.1| allophanate hydrolase [Burkholderia cenocepacia MC0-3] Length = 623 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 116/418 (27%), Positives = 186/418 (44%), Gaps = 42/418 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P IKD GI T A C + P + V ++L GA+ +GK N+D+FA Sbjct: 75 LYGVPFAIKDNIDLAGIPTTAGCPAY--AYTPARSAPVVERLIAAGAIPVGKTNLDQFAT 132 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S + S YG + ++D ++ GGSS GS+ AVA + S+GTDT GS R PA+ Sbjct: 133 GLSGQRSPYGACRN---ALDP--RYASGGSSSGSAVAVALGVATFSLGTDTAGSGRVPAA 187 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA---TCV 246 F G +G+KPT G S LG++ SLD + R+ D+ + A G + D Sbjct: 188 FHGLIGLKPTRGVLSTLGVVPACRSLDCVSVFARSADDARTVFAAAHGVTDGDPYGRAWQ 247 Query: 247 NLPVPDYERALD-QSIQGMTVGIPKEYRLDYLS-PTIDKTWQQGISWLKDAGAKIVEISL 304 L D RA + + + G P+ +L++ + W + ++ GA++VEI Sbjct: 248 PLLGADGLRAQPARPLAQLRFGTPRADQLEFFGDASYRAAWGAALERMRATGARVVEIDF 307 Query: 305 PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIM 364 +P A++ L YDG R+ E V I+ Sbjct: 308 -------------APFLAAARL-LYDGPWVAERLAAIGAFAAREPDAL----HPVIREII 349 Query: 365 IGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSG 424 G S+ + + R ++R R + G+D I+ PT+ T+A + E + Sbjct: 350 GGASRFSAADAFAAFDRLAELRVDAARAW-----DGLDAIVMPTSATTAT-VDALEADPI 403 Query: 425 SMGHIYNDVFTVAVNMAGLPAISVPAALC----EKKMPLGLQLIGQPFREETLFSVGQ 478 ++ + +T VN+ L AI+VPA C +P G+ +G+ + L + Q Sbjct: 404 AINSRFG-YYTNFVNLLDLSAIAVPAGTCSTGPHAGLPFGITFVGRAHDDARLLDLAQ 460 >gi|56697776|ref|YP_168146.1| amidase [Ruegeria pomeroyi DSS-3] gi|56679513|gb|AAV96179.1| amidase family protein [Ruegeria pomeroyi DSS-3] Length = 476 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 129/490 (26%), Positives = 210/490 (42%), Gaps = 52/490 (10%) Query: 18 SKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPI 76 S +SA + V + I+ ++ N +NA ++ A+ A A DK R L G+P+ Sbjct: 20 SGALSAEQAVGAAIERMQAVNPDLNAVVDSCAEAAMDRARALDKARAAGTPCGPLHGVPV 79 Query: 77 GIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETS 136 IK G T L ++ V + L GAV++G+ N EF+ + + Sbjct: 80 TIKVNVDQTGYATTNGVTALKDMIAPDDAPVVRNLQAAGAVVIGRTNTPEFSFRADTDNP 139 Query: 137 YYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGI 196 YG +PW +PGGSSGG+ +AV + A + G D GGS+R PA+ G V + Sbjct: 140 LYGRTHNPWGR-----HISPGGSSGGAGSAVMAGIGALAHGNDIGGSLRFPAAANGAVTV 194 Query: 197 KPTYGRC--------SRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNL 248 KP GR + G++ A S+ G+ITR+ D + + ++ D D ++ Sbjct: 195 KPGLGRVPAWNPSQKAERGML--AQSMSVQGLITRSAADLHLAMPSLIAPDPRDP--FHV 250 Query: 249 PVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQ 308 P+P ++ I+ V K L P ++ L+DAG + E+ P Sbjct: 251 PLPWRGTPVEGPIR---VAFTKATYGYDLHPEVEAALDTARDALRDAGYLVEEVETPDAF 307 Query: 309 YALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 A A Y E + L + D YG + +DI E+Y G E+ Sbjct: 308 EAGRAGYRALMGEVWA-LMKADVDAYGSQTV-RDIFEVYFQEFPPFHGTELLQ------- 358 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMG- 427 V+++R SHY R + F + ++L P P F G + + G+ G Sbjct: 359 VMAAR---SHYAREWSL-----------FLEQYPLVLGPFLPQPFF--GPDRDTEGAEGV 402 Query: 428 --HIYNDVFTVAVNMAGLPAISVP---AALCEKKMPLGLQLIGQPFREETLFSVGQIIEK 482 + + V++ A+N GLPA +P A L + P+ +Q+ + +RE+ +E Sbjct: 403 HEALGSAVWSYAMNFIGLPAACLPTRLADLPKGAQPINVQITARRWREDMAVDAAAAVEA 462 Query: 483 EAGYFRPHKW 492 G PH W Sbjct: 463 RVGRMAPHLW 472 >gi|226199251|ref|ZP_03794811.1| peptide amidase (Pam) [Burkholderia pseudomallei Pakistan 9] gi|225928658|gb|EEH24685.1| peptide amidase (Pam) [Burkholderia pseudomallei Pakistan 9] Length = 371 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 59/343 (17%) Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+T GSI PA+ G VG+KPT GR SR GI+ + + D AG I RTVRD+A LL A+A Sbjct: 51 GTETDGSIVSPAAINGCVGLKPTLGRVSRDGIVPVSHTQDTAGPIARTVRDAARLLGALA 110 Query: 237 GYDECD-ATCVNLPVPDYERALD-QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 G D D AT DY ALD +++G +GI + Y + +D ++ I+ +K Sbjct: 111 GGDARDSATASAPAPADYVAALDANALRGARLGIARAYFTGH--DEVDVQIERAIAEMKR 168 Query: 295 AGAKIVE-ISLPHTQY--------------ALPAYY-IISPAEASSNLARYDGVRYGLRV 338 GA +++ + LP Y LP++ +P LA D + + R Sbjct: 169 LGAVVIDPVDLPKADYEEDEKVVLLHEFKHGLPSWLRTFAPHARVRTLA--DVIAFNARQ 226 Query: 339 EGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFE 398 +++ FGQE L ++ L A R + R A + Sbjct: 227 HAREMPY---------FGQE-----------LLLHAQEAGGLDAAAYRDALARCGRRARD 266 Query: 399 QG---------VDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVP 449 +G +D ++ PT T A+ + +SG D F+ +AG P ++VP Sbjct: 267 EGLARVLREHRLDALVAPTEGT-AWLIDLINGDSG------GDGFSTPAAVAGFPHLTVP 319 Query: 450 AALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 A L + +P+G+ +G P+ E L ++G E+ + R ++ Sbjct: 320 AGLV-RGLPVGVSFVGAPWSEARLLALGYAFEQATQWRREPRF 361 >gi|91778739|ref|YP_553947.1| amidase [Burkholderia xenovorans LB400] gi|91691399|gb|ABE34597.1| Putative amidase [Burkholderia xenovorans LB400] Length = 633 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 117/414 (28%), Positives = 176/414 (42%), Gaps = 43/414 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD G+ T A + P + Q+L D GA++LGK N+D+FA G Sbjct: 76 LFGVPFAVKDNIDVAGLPTTAACEPF-AYTPDASAFAVQRLVDAGAILLGKTNLDQFATG 134 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 S YG V + + GGSS GS+ AVA A S+GTDT GS R PA F Sbjct: 135 LVGTRSPYGAV-----RHAGSPLYVSGGSSSGSAVAVAAGCVAFSLGTDTAGSGRVPAGF 189 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPV 250 G VG+KP+ G S+ G++ SLD + V D+ +L IA +D D +P Sbjct: 190 NGLVGLKPSLGLVSKRGVVPACRSLDTISVFAHDVDDAWRVLSEIACFDSLDGYSRKVPA 249 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310 RA + VG+P++ L++ D Q S D + +S + Sbjct: 250 LGLLRAAPR------VGVPEQ--LEFYG---DTAASQAFSSALDTLTTHLHLSTQPIDF- 297 Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL 370 P +A S L YDG E + L + T V I Sbjct: 298 -------EPLQAVSAL-LYDGPWVA---ERRAALGTFFETHHEAIDPVVAKVIGKAEQFN 346 Query: 371 SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENN---SGSMG 427 ++ ++ Y A +KR EA + +D+++ PTTPT + N + +G Sbjct: 347 AADAFNGQYALAD-----LKRH-AEALFETIDILIVPTTPTHPLIADVKANPVELNSQLG 400 Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 + +T VN+ L A++VP +P G+ LI + L +G I+ Sbjct: 401 Y-----YTNFVNLLDLCALAVPCQRRSDGLPAGVTLIAPSGADRRLAELGARIQ 449 >gi|330991929|ref|ZP_08315878.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter sp. SXCC-1] gi|329760950|gb|EGG77445.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter sp. SXCC-1] Length = 427 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 123/435 (28%), Positives = 188/435 (43%), Gaps = 63/435 (14%) Query: 53 RAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW 112 R A + D R G L G+P+GIKD T + T S +G RP ++ L Sbjct: 52 RLQARQLDARPHKG---RLHGLPVGIKDVIDTHDLPTGYGSRHYEGTRPASDAGCVAMLR 108 Query: 113 DNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTD-KFTPGGSSGGSSAAVAGFL 171 GA+++GK EFA ++P ++ + D TPGGSS GS+AAV + Sbjct: 109 AEGALIVGKTVSTEFAF------------VAPGKTRNPYDPAHTPGGSSSGSAAAVGAGV 156 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 ++GT T GS +PA+F G VG KP+YG R GI +LD G++ V D A++ Sbjct: 157 VPVALGTQTSGSTIRPAAFCGIVGYKPSYGLIDRTGIKVLCETLDTVGLLGWRVADVALV 216 Query: 232 LKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISW 291 +A P+ E + Q + +G+ + +P +++ + Sbjct: 217 ASVLA----------QRPL---EAQAGTAAQKLRLGVFRPVFWHEATPAALAVFERALDR 263 Query: 292 LKDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENT 350 + AG +IVE+ P AL A+ I E LA Y+ + G ++ + YEN Sbjct: 264 FRAAGHEIVELPDPGDFGALMAAHTAIMSWEVPRALA-YERLGDGAGLQPR----TYENI 318 Query: 351 RSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP 410 + + V +++ YD+ A + R L K T G+D +LT P Sbjct: 319 QI--------------SPVTTAQVYDAAQAVACRERALWKEAMT-----GLDAVLTLPAP 359 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 A PLG N VF GLP +S+PA MPLG+Q +G + Sbjct: 360 GEA-PLGLSSTG--------NPVFNRGWTQLGLPCVSLPAGHGAGGMPLGVQCVGAMGAD 410 Query: 471 ETLFSVGQIIEKEAG 485 +L +V +E G Sbjct: 411 ASLLAVATALETVLG 425 >gi|302663928|ref|XP_003023601.1| hypothetical protein TRV_02233 [Trichophyton verrucosum HKI 0517] gi|291187605|gb|EFE42983.1| hypothetical protein TRV_02233 [Trichophyton verrucosum HKI 0517] Length = 577 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 136/529 (25%), Positives = 218/529 (41%), Gaps = 85/529 (16%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAIENSNS----QMNAYIEVVAQKARAAAEESDK 61 + V + D S +++ + + + I + A+ E AAAE S Sbjct: 77 YYTVQDYHDMYVSGELTPTAVAKAILPLIRRDTTPPGEHSAAWFETRVDLVLAAAEASTL 136 Query: 62 RIINGDARDL-EGIPIGIKDCFATKGIHTQACSHILDGFRPHYEST-------VTQKLWD 113 R G R L +GIP +KD + G T C L+ + S+ +KL + Sbjct: 137 RYKQGCPRGLMDGIPTAVKDEYDIDGYKT--CLGSLNDYTSDPASSGGSIASWCVRKLEE 194 Query: 114 NGAVMLGKLNMDEFAM---GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGF 170 GAV+LGKL+M EF + +S YG ++P+ K+ GGSS G++ AV+ Sbjct: 195 AGAVVLGKLSMHEFGLVDVDTSGSNPNYGTPLNPYNP-----KYYTGGSSSGTAYAVSVG 249 Query: 171 LCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAI 230 L ++G+D GGSIR P+SF G+KPT+ R S + + + G I ++ + Sbjct: 250 LLPFALGSDGGGSIRIPSSFCSVYGLKPTHSRISHHPGPNHSNTCAVNGPIAADLQSLSA 309 Query: 231 LLKAIAGYDEC-DATCVNLPVPDYERALDQSIQGMT-VGIPKEYRLDYLSPTIDKTWQQG 288 L + I C T LPV R + G +G+P+ + +P I + Sbjct: 310 LYRIIG----CPPPTSPFLPV--SPRLAPCNPNGTKYLGVPEAW-FSQATPAIQHLCRSA 362 Query: 289 ISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 IS L D +V I +P+ A+ + +A++ L + Sbjct: 363 ISTLADKHNYTVVPIQIPYLVEGQIAHAVTILTDAATLLPDTSNL-------------TA 409 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQ--GVDVIL 405 N +G G+E + YL A+K+R L+ + + +++ G+ +I+ Sbjct: 410 PNKILLGLGRETPA---------------TDYLLAQKLRRLLMQHLSWLWKEYPGM-IIV 453 Query: 406 TPTTPTSAFPL--GKEENNSGSMGH--IYNDVFTVAVNMAGLPAISVPAALC-------- 453 TPTT + +P+ KE S G + F N GLPAI+VPA Sbjct: 454 TPTTSCAGWPIRDQKELKYGISDGDQTLKTMNFIWLANFTGLPAINVPAGFVVPEGTKNE 513 Query: 454 --------EKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR--PHKW 492 E K+P+GL G+ E+ L G +E G R P W Sbjct: 514 GEIAEENTEGKIPIGLMGTGEWGSEDFLMRWGLDVENVVGDRRSKPPVW 562 >gi|206561331|ref|YP_002232096.1| amidase [Burkholderia cenocepacia J2315] gi|198037373|emb|CAR53308.1| putative amidotransferase [Burkholderia cenocepacia J2315] Length = 458 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 76/236 (32%), Positives = 116/236 (49%), Gaps = 14/236 (5%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGF-RPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +LDG ++ +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLDGAPAARTDAVAVARLKRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 ++G SP+ D GGSS G++A+VA + A ++GTDTGGSIR PA+ Sbjct: 134 SGLGLNPHFGNPRSPYHRDVPGDARISGGSSSGAAASVADGMAAVALGTDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R G + + +LD G I TV A++ + +AG + Sbjct: 194 LCGLTGFKPTASRIPTQGGVPLSTTLDSFGPIGLTVACCALVDRMLAGLE---------- 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP 305 P A + ++G+ +G+ Y D + + + L+ AGA + E+ P Sbjct: 244 -PHVPAA--RPLEGVRLGVLTNYVTDGVDADVAAALDTALKHLEAAGAIVTEVRFP 296 >gi|221202045|ref|ZP_03575081.1| amidase family protein [Burkholderia multivorans CGD2M] gi|221204824|ref|ZP_03577841.1| amidase family protein [Burkholderia multivorans CGD2] gi|221175681|gb|EEE08111.1| amidase family protein [Burkholderia multivorans CGD2] gi|221178128|gb|EEE10539.1| amidase family protein [Burkholderia multivorans CGD2M] Length = 469 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 120/501 (23%), Positives = 211/501 (42%), Gaps = 58/501 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 + L+ ++ + D R K +S V++ + + I+ + A + A A A S+ Sbjct: 4 TPLHELSAATLVDGYRRKTLSPVDVTQAVLARIDEWEPLIRATYALDPDGALAMARASEA 63 Query: 62 RIINGD-ARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 R + G+ A L+G+P+ IK+ AT+G+ + + ++ +L + GAV +G Sbjct: 64 RWLRGEPAGPLDGVPVTIKENIATRGVPVPLGCAVTELTPAADDAPPAARLREAGAVFVG 123 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K M +F + + +S++ +PW +T SS G+ AA A +G+D Sbjct: 124 KTTMPDFGLIGAAASSFHPLTRNPWDPSRNTGG-----SSSGAGAAAAAGYGPLHLGSDI 178 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ------AGIITRTVRDSAILLKA 234 GGS+R PA+F G G KP++GR +DQ G +TRTV+D+A+ ++ Sbjct: 179 GGSVRIPAAFCGVFGFKPSFGRV----------PVDQPYPGRVTGPLTRTVQDAALAMQT 228 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKD 294 IA D D + D+ L++ +G+ +G+ ++ P G+ Sbjct: 229 IALPDARDHMSLPYQPIDWLN-LERDAKGLRIGL-------WIDP------GNGVQ---- 270 Query: 295 AGAKIVEISLPHTQYALPAYYIISPAE------ASSNLARYDGVRYGLRVEGKDILEMYE 348 A++ A + P A +AR+ +G R+ G L Sbjct: 271 VAAEVRAAIERAAAAFAAAGATLVPVRPWLARGALEAVARF----WGARLRGT--LAALP 324 Query: 349 NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT 408 R V+ R V++ D+ Y A + L R T A D +L+PT Sbjct: 325 AARRELVAAFVRRR----AEVVADATGDTIY--AAYAQMLALRAQTVAATAEFDYVLSPT 378 Query: 409 TPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPF 468 P F + + I VFT+A N++ PA S+ +P+GLQ+ G+ F Sbjct: 379 FPQPPFAAEATHIDQDGLHPIEQVVFTLAFNLSEQPAASINCGYTRDGLPIGLQIAGRRF 438 Query: 469 REETLFSVGQIIEKEAGYFRP 489 + + + + E+ RP Sbjct: 439 DDLGVLQLARCWEQMDTVRRP 459 >gi|330906603|ref|XP_003295533.1| hypothetical protein PTT_01508 [Pyrenophora teres f. teres 0-1] gi|311333113|gb|EFQ96377.1| hypothetical protein PTT_01508 [Pyrenophora teres f. teres 0-1] Length = 1004 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 143/323 (44%), Gaps = 29/323 (8%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQM--NAYIEVVAQKARAAAEESDKRIIN 65 ++++ R L S I++V+LV SY+ I + ++ NA+ V + A SD R Sbjct: 332 SIADHRQALNSGTITSVDLVISYLNRIATYDIRLGLNAF-TVFNPNVLSEAAASDLRRAQ 390 Query: 66 G-DARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 G R LEGIP IKD + G+ S L G +S + KL D GAV++GK NM Sbjct: 391 GLPPRLLEGIPYTIKDSYKVAGMSVTNGSPALKGLMSSGDSAIAGKLRDAGAVLIGKTNM 450 Query: 125 DEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSI 184 A G + YG SP+ T F+ GSS G++ +V + A +G++T S Sbjct: 451 PPMAAGGM-QRGLYGRAESPYNGKYLTAAFS-SGSSNGAATSVTSSMAAFGMGSETVSSG 508 Query: 185 RQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 R PAS V P+ G S G+ + D R++ D LL IA D D T Sbjct: 509 RSPASNNALVCYTPSKGLLSCRGLWPLYVTCDVPTPYARSMDDMLELLNVIATPDP-DLT 567 Query: 245 C--------VNLPVP---DYERALDQS-IQGMTVGIPKEY----------RLDYLSPTID 282 + +P P DY + ++G +GIPK Y + Y+SP++ Sbjct: 568 GDFIREQPHIQIPKPPEIDYTTLRNPDFLKGKHIGIPKLYIGGHDTHPHAKHPYVSPSVI 627 Query: 283 KTWQQGISWLKDAGAKIVEISLP 305 W L+ GA+I P Sbjct: 628 ALWATTAKTLESLGAEITYTDFP 650 >gi|48375111|gb|AAT42218.1| PcoX [Pseudomonas fluorescens] Length = 509 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 132/511 (25%), Positives = 205/511 (40%), Gaps = 83/511 (16%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D +R K+++ ELV + +Q I+ N +NA + ++ +A+ S R+ D L G Sbjct: 20 DMVRRKEVTPSELVRAAVQRIDGRNGPLNAVVHLLEDEAK-----SQCRLPLADG-PLSG 73 Query: 74 IPIGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSS 132 +PI IKD A +G T+ S + + +S ++ G + +GK E + Sbjct: 74 VPILIKDLLAEIEGCPTRNGSRLFKHYVAREDSQTIKRYRKAGLIFVGKTATPELGLHPY 133 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 E+ G +PW S SSGG+ AAVA + + G+D GGSIR PAS G Sbjct: 134 TESDATGITRNPWNLGLSPGG-----SSGGACAAVAAGMTPIAHGSDGGGSIRLPASHCG 188 Query: 193 TVGIKPTYGRC-SRLGIISFAPSLDQAGIITRTVRDSAILLK-AIAGYDECDATCVNLPV 250 G+KPT GR S L ++R+VRDSA +L IAG D+ DA P Sbjct: 189 VFGLKPTRGRSPSGPHFSELWQGLVVEHAVSRSVRDSAAMLDILIAGSDDADA--YRWPA 246 Query: 251 PDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKDAGAKIVE 301 P ++S T P R+ Y LSP + + L D G +VE Sbjct: 247 P------EESFLSSTCNTPGRLRIAYTFQPFLGGELSPDCRAAVESSLQLLADLGHDVVE 300 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGV-RYGLRVEGKDILEMYENTRSIGFGQEVK 360 P LA D + L + ++ + EN + Sbjct: 301 AHPP--------------------LASADQLCEAMLTIVCGEMASLVENAGRMLDRVATY 340 Query: 361 HRIMIGTYVLSSRCY---DSHYLRARKIRTLIKRDFTEAFEQGVDVILTPT-----TPTS 412 GT+ L+ + + H R R++ L + AF + DV++TP + Sbjct: 341 EDFEPGTWALARQGHIFKAVHLARMREL-ALHQGRIMSAFHEDYDVLVTPVVNQLPSAVG 399 Query: 413 AFPLGKEEN--NSGSMGHIYNDV--------------------FTVAVNMAGLPAISVPA 450 AF L E + +G D ++ NM+G PA+SVP Sbjct: 400 AFRLSPLEARLSRKVLGQWGQDWPLRLGNRLPQTSRQVMEYMGWSTPFNMSGQPAMSVPL 459 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 E +P+G Q + + E L + + +E Sbjct: 460 FWNEAGLPIGTQFVAKMGNEAMLLQLARSLE 490 >gi|330809561|ref|YP_004354023.1| amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377669|gb|AEA69019.1| Putative amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 485 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 124/485 (25%), Positives = 199/485 (41%), Gaps = 55/485 (11%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +R ++ EL+++ I+ +E Q+NA E + AR AA R L G+P Sbjct: 22 VRRGEVQPGELLETAIERLERVEPQLNAVAERLYDSAREAA-----RKPQAGQGLLAGVP 76 Query: 76 IGIKDCFA-TKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 IKD F+ G S L R +ES V +L G ++G EF + E Sbjct: 77 TLIKDLFSPVDGAAMTNGSRALGDCRADFESEVVARLRRAGCQVMGASTSPEFGTSYTTE 136 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 + +G +PW S D + + GG++ +A V F + G D GGS+R PAS G Sbjct: 137 SVRFGATRNPW-STDHSAGGSSGGAAALVAARVVPF----AHGNDGGGSLRVPASCCGVF 191 Query: 195 GIKPTYGRCSRLGIISFAPSLDQ--AGI-----ITRTVRDSAILLKAIAGYDECDATCVN 247 G KP+ G++ P + + AG+ IT +VRDSA LL A AG D Sbjct: 192 GFKPSR------GLMPSGPIMGEGWAGMGTPHAITLSVRDSAALLDATAGMDLGAPYAAP 245 Query: 248 LPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLP-- 305 + Y A+ + + + + ++ SP + + + G ++ +SLP Sbjct: 246 IQALPYVMAVQADPKPLRIALVEQLEPWPTSPQSLQAVGEAARLCESLGHRVEPVSLPVG 305 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 ++ + II ++ RY D+L + EV+ RI++ Sbjct: 306 LLEFLDHVFSII-----GASTRRY-----------VDLLGQMRGSAVQAEELEVRTRIIL 349 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 + Y+ A + + R F Q DVILTP P+G+ + Sbjct: 350 RD---KGNVSGAQYVAAVEWIHALGRQLA-VFMQDYDVILTPVLTREPVPIGELDLQDVC 405 Query: 426 MG--------HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 M H Y FT N +G PA+SVP + +P+G G+ E TL ++ Sbjct: 406 MSLDQLLERYHSYAP-FTALFNASGQPAMSVPLSWSANGLPMGAHFAGRFGEESTLLALA 464 Query: 478 QIIEK 482 +E+ Sbjct: 465 AQLER 469 >gi|307611201|emb|CBX00846.1| hypothetical protein LPW_25501 [Legionella pneumophila 130b] Length = 263 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 27/265 (10%) Query: 1 MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIE-VVAQKARAAAEES 59 M ++ ++ +E R++ K++SA E++ +++ I+ N +NA E + ++ A+E Sbjct: 1 MDAIHLLSATEIIRRIKMKELSAAEVMVAHLNHIDKINPVINALTERIPPEECLRRAKEI 60 Query: 60 DKRIIN-GDARDLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 DK I + + L G+P+ IKD KG I + ACS G + ++T+ +L GA+ Sbjct: 61 DKSIASKKNLNKLMGLPVAIKDALYVKGLICSSACSGFYKGEKAVRDATLVSRLKKEGAI 120 Query: 118 MLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIG 177 +LG N+ E G ++ YG +P+ T GGSSGGS+A +A ++G Sbjct: 121 ILGLTNVPELCRGGDSDNLIYGRTNNPYDLAR-----TSGGSSGGSAALIAAGGVPFALG 175 Query: 178 TDTGGSIRQPASFTGTVGIKPTYGRCSRLG------------IISFAPSLDQAGIITRTV 225 +D GGS+ QPA G V +KPT+GR G +ISF P + R+V Sbjct: 176 SDGGGSLMQPAHCCGIVALKPTHGRLPHTGSVGGDSYGLIGNLISFGP-------MARSV 228 Query: 226 RDSAILLKAIAGYDECDATCVNLPV 250 D + L +AG D+ D +PV Sbjct: 229 SDLRLGLSVLAGSDQYDPYTNPVPV 253 >gi|121599963|ref|YP_993903.1| amidase [Burkholderia mallei SAVP1] gi|126449582|ref|YP_001079748.1| amidase [Burkholderia mallei NCTC 10247] gi|238561700|ref|ZP_00441691.2| amidase family protein [Burkholderia mallei GB8 horse 4] gi|254203952|ref|ZP_04910312.1| amidase family protein [Burkholderia mallei FMH] gi|254208932|ref|ZP_04915280.1| amidase family protein [Burkholderia mallei JHU] gi|254360015|ref|ZP_04976285.1| amidase family protein [Burkholderia mallei 2002721280] gi|121228773|gb|ABM51291.1| amidase family protein [Burkholderia mallei SAVP1] gi|126242452|gb|ABO05545.1| amidase family protein [Burkholderia mallei NCTC 10247] gi|147745464|gb|EDK52544.1| amidase family protein [Burkholderia mallei FMH] gi|147750808|gb|EDK57877.1| amidase family protein [Burkholderia mallei JHU] gi|148029255|gb|EDK87160.1| amidase family protein [Burkholderia mallei 2002721280] gi|238524162|gb|EEP87597.1| amidase family protein [Burkholderia mallei GB8 horse 4] Length = 616 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 232 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 291 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 292 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 351 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 352 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 409 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 410 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 453 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 454 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 501 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 502 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 556 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 557 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 609 >gi|316933295|ref|YP_004108277.1| amidase [Rhodopseudomonas palustris DX-1] gi|315601009|gb|ADU43544.1| Amidase [Rhodopseudomonas palustris DX-1] Length = 471 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 115/488 (23%), Positives = 205/488 (42%), Gaps = 66/488 (13%) Query: 19 KDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDL-EGIPIG 77 K S E++++ I +NA AR AA+ S R G+ L +G+P+ Sbjct: 27 KQFSPSEVMEAVIAQATRWEPHINALYGFDPDTARKAAQASTARWAKGEPLGLLDGVPVT 86 Query: 78 IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSY 137 IK+ AT+G+ I ++ +L + G ++ K M +F M SS +S+ Sbjct: 87 IKENVATEGVPVPLGVPITPLTPAAADAPPAARLREAGGILWSKTTMPDFGMLSSGLSSF 146 Query: 138 YGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIK 197 +G +PW +T SS G+ AA A +GTD GGS+R PA++ G +K Sbjct: 147 HGVTRNPWDVSQNTGG-----SSAGAGAAGAAGYGPLHLGTDIGGSVRLPAAWCGIFALK 201 Query: 198 PTYGRCSRLGIISFAPSLDQ-AGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERA 256 P+ GR + P + + AG +TRTV D+A+++ ++ D D ++LP D++ + Sbjct: 202 PSLGR-----VPIDPPYVGRCAGPMTRTVDDAALMMSVLSQPDGRDG--MSLPPHDFDWS 254 Query: 257 -LDQSIQGMTVGIPKEYRLDY-LSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 LD ++G +G+ + L + Q + GA + + L T+ + Sbjct: 255 ELDVDVRGKKIGLLTDLGFGMELEDEVRDIVTQAARTFEAQGAIVEPVGLGFTREMMDGL 314 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVL---- 370 A S+LA+ F E + R++ Y++ Sbjct: 315 DAFWRARMWSDLAQ--------------------------FSDEQRARVL--PYIVRWAE 346 Query: 371 -SSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 +R +R +T+ R G+D +++P P +F + + Sbjct: 347 PGARLSGVEVIRGFN-QTMAMRALGAKLFAGIDYLISPVAPVVSF--------AADVASP 397 Query: 430 YND--------VFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 +ND ++TV NMA PA S+ K P+G+Q++G+ F + + + + E Sbjct: 398 WNDPDRPFDHILYTVPWNMAENPAASINGGYSTKGFPIGVQIVGKRFDDLGVLRMAKAFE 457 Query: 482 KEAGYFRP 489 G +P Sbjct: 458 SLRGEQKP 465 >gi|94988392|ref|YP_596493.1| amidase [Streptococcus pyogenes MGAS9429] gi|94992274|ref|YP_600373.1| amidase [Streptococcus pyogenes MGAS2096] gi|94541900|gb|ABF31949.1| amidase family protein [Streptococcus pyogenes MGAS9429] gi|94545782|gb|ABF35829.1| Amidase family protein [Streptococcus pyogenes MGAS2096] Length = 484 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 136/505 (26%), Positives = 238/505 (47%), Gaps = 81/505 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--LPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD KG + + S + ++ ++L G ++LG+ N EF + ++ Sbjct: 68 LFLKDLGQELKGHSSTSGSRLFKEYQATKTDLFVKRLEALGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SSLHGPVNLP---KDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+ + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKDSIYQSLQRPLTIAFYQ--RLSDGSPVSLDTAKALKQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV-KHRI 363 + + YYI++ E ++ A DI E+T FG+ + K + Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFA--------------DI----EDT----FGRPMTKDDM 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKE 419 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 333 ETMTWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGEL 390 Query: 420 ENNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKK 456 +S M ++ +N V +T N+ G PAIS+P ++ Sbjct: 391 VPDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEG 450 Query: 457 MPLGLQLIGQPFREETLFSVGQIIE 481 +P+G+QLI RE+ L + + E Sbjct: 451 LPMGIQLIAAKGREDLLLGIAEQFE 475 >gi|330981610|gb|EGH79713.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 457 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+PI KD F G T A + + P ++ L +G V LGK N+ EFA Sbjct: 74 DGVPIAWKDLFDVAGSVTTAGAAVRTSLSPALLDAPTVGLLARSGMVSLGKTNLSEFAYS 133 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G ++P S DS+ + PGGSS GS+ AVA ++GTDT GSIR PA+ Sbjct: 134 GLGLNPHFGTPVNP--SSDSSPR-VPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 G VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 231 >gi|251766973|ref|ZP_04819901.1| amidase family protein [Burkholderia mallei PRL-20] gi|243064197|gb|EES46383.1| amidase family protein [Burkholderia mallei PRL-20] Length = 616 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 232 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 291 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 292 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 351 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 352 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 409 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 410 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 453 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 454 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLTRILKGEPA 501 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 502 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 556 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 557 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 609 >gi|171694898|ref|XP_001912373.1| hypothetical protein [Podospora anserina S mat+] gi|170947691|emb|CAP59853.1| unnamed protein product [Podospora anserina S mat+] Length = 594 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 125/517 (24%), Positives = 223/517 (43%), Gaps = 73/517 (14%) Query: 6 FMAVSESRDRLRSKDISAVELVDSYIQAI-----ENSNSQMNAYIEVVAQKARAAAEESD 60 F ++++ + +S + +++V++ + I + + A+IE + A ES Sbjct: 109 FNSIADYHELYKSGQATPLDVVEALLPLIRRDVGDEESKYAVAFIESNVDEVLQHAREST 168 Query: 61 KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLW------D 113 +R G L+G+P G+K KG + +D ++ + W + Sbjct: 169 ERWKEGKQLGILDGVPFGVKADTEVKG-YVSTMGMKVDKTVAYFNKPEPETCWPALKMQE 227 Query: 114 NGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCA 173 GA+M+GK+N E M +T+ PV + +T F PGGSS G+ + + L Sbjct: 228 QGAIMVGKMNQHEIGM----DTTGCNPVTGTATNWYNTRYF-PGGSSSGAGSGLCAGLVP 282 Query: 174 ASIGTDTGGSIRQPASFTGTVGIKPTYGR-CSRLGIISFAPSLDQAGIITRTVRDSAILL 232 +IGTD GGS+R P +F G G+KPT+ R CSR A S+ G +T TV D I Sbjct: 283 VAIGTDAGGSMRIPPAFCGVYGLKPTFNRTCSR------ATSMCVVGPMTSTVADLTIAY 336 Query: 233 KAIAGYDECDA----TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQG 288 + ++ + D C+++P + T+GI + + + P + K + Sbjct: 337 RVMSQPNPSDPGQNLLCLSVPPSPGSKK--------TLGICRAW-IARADPDVLKVFSSC 387 Query: 289 ISWLKDA-GAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + +L G V+ISLP+ + A+ EA++ + Y + + Sbjct: 388 VEYLTTVKGYTAVDISLPYLREGQLAHAATCLTEAATEAFARNPSNYLAPLNHAN----- 442 Query: 348 ENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVD-VILT 406 R+++ ++ + YL +IR +I +EQ D ++LT Sbjct: 443 --------------RMLVSA---ATHTPATDYLSYGQIRHVIMAHLAWLWEQHPDMIVLT 485 Query: 407 PTTPTSAFPLGKEENNSG-SMGH--IYNDVFTVAVNMAGLPAISVPAALCEKK-----MP 458 PTTP + + + + G S G+ I N F N +G PA++ P E + +P Sbjct: 486 PTTPIAGWKICDGDEAYGCSDGNLSIKNMTFAWVANTSGCPAVTCPGGYVEAEQGEGVLP 545 Query: 459 LGLQLIGQPFREETLFSVGQIIE---KEAGYFRPHKW 492 +G+ +G+ EE L + +E + G RP +W Sbjct: 546 VGVMGMGEWGAEEQLLGFARDVEGFLEVEGRRRPKEW 582 >gi|237813342|ref|YP_002897793.1| amidase family protein [Burkholderia pseudomallei MSHR346] gi|237503818|gb|ACQ96136.1| amidase family protein [Burkholderia pseudomallei MSHR346] Length = 563 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 179 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 238 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 239 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 298 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 299 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 356 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 357 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 400 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 401 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 448 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 449 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 503 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 504 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 556 >gi|121700416|ref|XP_001268473.1| amidase family protein [Aspergillus clavatus NRRL 1] gi|119396615|gb|EAW07047.1| amidase family protein [Aspergillus clavatus NRRL 1] Length = 588 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 142/516 (27%), Positives = 222/516 (43%), Gaps = 57/516 (11%) Query: 3 ELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQK---ARAAAEES 59 +L ++ + + L + +++V+L+ Y+ I Q++ Y+ + Q A A AE Sbjct: 63 QLEEASIDDLQRHLSAGRLTSVQLLGCYLDRI----FQVDGYLNAILQHNPDAFAIAEAL 118 Query: 60 DKRIINGDARD-LEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQKLWDNGAV 117 D G R L GIP +KD ATK + T A S L G ++ V ++L GA+ Sbjct: 119 DAERARGKTRGPLHGIPFIVKDNIATKDRMETTAGSWALLGSVVPRDAFVVRQLRKAGAL 178 Query: 118 MLGKLNMDEFA-MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASI 176 +LGK + E+A M S+N + Y RS + PGGSS GS AV L ++ Sbjct: 179 LLGKAALSEWADMRSNNYSEGYSARGGQCRSAYNL-TVNPGGSSSGSGVAVGANLVPFAL 237 Query: 177 GTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIA 236 GT+T GS+ PA VGIKPT G SR G+I + D G+ +TVRD+ L AI Sbjct: 238 GTETDGSVINPAQRNAIVGIKPTVGLTSRDGVIPESLHQDTVGVFGKTVRDATYALDAIY 297 Query: 237 GYDECD----ATCVNLPVPDYERAL-DQS-IQGMTVGIPKEYRLDYLSPTIDKTWQQGIS 290 G D D A PV Y + + D+S ++G G+P E + P+ + + Sbjct: 298 GIDARDNYTSAQRGRTPVGGYAQFVTDRSALKGGVFGLPWESFWRFGDPSQISQLLELVE 357 Query: 291 WLKDAGAKIVE-ISLPHTQYALPAYYIISP---------AEASSNLARYDGVRYGLRVEG 340 ++ AGA I+ LPH + I+SP N + Y V+ Sbjct: 358 LIRAAGATIINGTELPHYR------QIVSPDGWDWDYGTRRGHPNESEYTYVKVDFYNNI 411 Query: 341 KDILEMYENT--RSI---------GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLI 389 K L +NT RS+ FG E + + + +++ + + ++ Sbjct: 412 KSYLSELKNTNMRSLEDLIEYNKANFGTEGGYPGIHPAFGSGQDGFEA----SLATKGVM 467 Query: 390 KRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMA---GLPAI 446 + + +A E TT + N G + ++ +A G P I Sbjct: 468 EETYWQALE-----FCGRTTREEGIDAALKHGNRTLDGLLVPPDVAQSIQIAAQAGYPVI 522 Query: 447 SVPAALCEKK-MPLGLQLIGQPFREETLFSVGQIIE 481 ++PA + EK MP GL ++ F E TL IE Sbjct: 523 TIPAGINEKSGMPYGLAILQTAFAESTLIRYASAIE 558 >gi|94990272|ref|YP_598372.1| amidase [Streptococcus pyogenes MGAS10270] gi|94543780|gb|ABF33828.1| Amidase family protein [Streptococcus pyogenes MGAS10270] Length = 484 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 136/505 (26%), Positives = 238/505 (47%), Gaps = 81/505 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--LPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 + +KD KG + + S + ++ ++L G ++LG+ N EF + ++ Sbjct: 68 LFLKDLGQELKGHSSTSGSRLFKEYQATKTDLFVKRLEALGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SSLHGPVNLP---KDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+ + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKDSIYQSLQRPLTIAFYQ--RLSDGSPVSLDTAKALRQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV-KHRI 363 + + YYI++ E ++ A DI E+T FG+ + K + Sbjct: 295 VNMTEVIRHYYIMNSVETAAMFA--------------DI----EDT----FGRPMTKDDM 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKE 419 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 333 ETMTWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGEL 390 Query: 420 ENNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKK 456 +S M ++ +N V +T N+ G PAIS+P ++ Sbjct: 391 VPDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEG 450 Query: 457 MPLGLQLIGQPFREETLFSVGQIIE 481 +P+G+QLI RE+ L + + E Sbjct: 451 LPMGIQLIAAKGREDLLLGIAEQFE 475 >gi|226197816|ref|ZP_03793390.1| amidase family protein [Burkholderia pseudomallei Pakistan 9] gi|225930004|gb|EEH26017.1| amidase family protein [Burkholderia pseudomallei Pakistan 9] Length = 616 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 232 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 291 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 292 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 351 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 352 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 409 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 410 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 453 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 454 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 501 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 502 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 556 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 557 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 609 >gi|193076976|gb|ABO11711.2| putative amidase [Acinetobacter baumannii ATCC 17978] Length = 603 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 127/501 (25%), Positives = 202/501 (40%), Gaps = 88/501 (17%) Query: 5 NFMAVSESRDRLRSKDISAVELVDSYIQAIEN---------SNSQMNAYIEVVAQKARAA 55 N + + + ++ I +L+ Y+ I+N SN QM A I+++ Sbjct: 4 NLWTIQDWKTAYQNGQIHLKDLI-GYVAEIQNDDHAWIEIASNEQMQAQIDIL------- 55 Query: 56 AEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDN 114 D+ + + L G+P +KD G HT A C + + + ++ V KL Sbjct: 56 ---KDQNVAD---LPLYGVPFAVKDNIDVAGFHTTAACKEV--QYLANQDAAVVAKLKKA 107 Query: 115 GAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAA 174 GA+++GK N+D+FA G S YG V + + ++ GGSS GSS VA + Sbjct: 108 GAIVVGKTNLDQFATGLVGVRSPYGAVKNSFNP-----EYISGGSSSGSSVVVANGIVPF 162 Query: 175 SIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA 234 S+GTDT GS R PA VG+KPT G S G+I ++D I V D+ + Sbjct: 163 SLGTDTAGSGRVPAGHNNIVGLKPTKGWFSTTGLIPACRTIDVISIFALHVDDAWTVASL 222 Query: 235 IAGYDECDATCVNLPVPDYERALDQSIQGM----TVGIPKEYRLDYLSPTIDKTWQQGIS 290 + GYDE D +Y R ++ + IP + Y +K + I Sbjct: 223 MQGYDETD---------EYSRVHPANVPNQFSKRKIAIPTQLEF-YGDLESEKAFLVAIE 272 Query: 291 WLKDAGAKIVEISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYEN 349 +K G + I + A Y AE + + R Sbjct: 273 RVKKLGYDVESIDFSAFNELAAALYNDAWVAERTVAVERM-------------------T 313 Query: 350 TRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTT 409 TR E H ++ + + + L+A R ++ R A Q D ++ PT Sbjct: 314 TR------EKAHPVIAQIIAQADKFKATDALQAEYNRAVLARKINLAL-QPFDALMVPTA 366 Query: 410 PT-------SAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQ 462 PT A PL K + MG +T VN A L A+++P L E +P G+ Sbjct: 367 PTIYTIAEVEADPLTK----NAHMG-----AYTNFVNFADLSALALPNVLREDGLPSGVT 417 Query: 463 LIGQPFREETLFSVGQIIEKE 483 I + ++ L + Q+ + E Sbjct: 418 FIAPAWHDQALANFAQLWQTE 438 >gi|306827504|ref|ZP_07460787.1| amidase [Streptococcus pyogenes ATCC 10782] gi|304430302|gb|EFM33328.1| amidase [Streptococcus pyogenes ATCC 10782] Length = 484 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 137/505 (27%), Positives = 236/505 (46%), Gaps = 81/505 (16%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 +++ + +ELV I + N +NA + +++ AA EE+ +R +G + G+P Sbjct: 13 VQTGQTTPLELVTQAIYKAKKLNPTLNA---ITSERFEAALEEAKQRDFSG--KPFAGVP 67 Query: 76 IGIKDC-FATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNE 134 I +KD KG + + S + ++L G ++LG+ N EF + ++ Sbjct: 68 IFLKDLGQELKGDLSTSGSKLFKNHHATKTDLFVKRLEALGFIILGRSNTPEFGFKNISD 127 Query: 135 TSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTV 194 +S +GPV P D+T GSSGG++A V+ + A + +D GGSIR PASF G + Sbjct: 128 SSLHGPVNLP---KDNTRNAG--GSSGGAAALVSSGISALATASDGGGSIRIPASFNGLI 182 Query: 195 GIKPTYGRCSRLGIISFAPSLDQAGI---ITRTVRDSAILLKAIAGYDECDATCVNLPVP 251 G+KP+ GR +G S+ S A + +T++VRD+ LL Y + + P+ Sbjct: 183 GLKPSRGRMP-VGPGSYR-SWQGASVHFALTKSVRDTRNLLY----YLQMEQMESPFPLA 236 Query: 252 DYER-ALDQSIQ-GMTVGIPKEYRLDYLSP-TID--KTWQQGISWLKDAGAKIVEI-SLP 305 + ++ QS+Q +T+ + RL SP ++D K +Q ++WL++ G ++VE+ P Sbjct: 237 TLTKDSIYQSLQRPLTIAFYQ--RLSDGSPVSLDTAKALKQAVTWLREQGHQLVELEEFP 294 Query: 306 -HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEV-KHRI 363 + YYI++ E ++ A DI E+T FG+ + K + Sbjct: 295 VDMTEVIRHYYIMNSVETAAMFA--------------DI----EDT----FGRPMTKDDM 332 Query: 364 MIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEA----FEQGVDVILTPTTPTSAFPLGKE 419 T+ + D R ++ L K D A F + D++LT TT T A G+ Sbjct: 333 ETMTWAIYQSGKDIPAWRYSQV--LQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGEL 390 Query: 420 ENNSGSMGHI-----------YNDV------------FTVAVNMAGLPAISVPAALCEKK 456 +S M ++ +N V +T N+ G PAIS+P ++ Sbjct: 391 VPDSKLMANLAQAEIFSSEEQFNLVETMFGKSLAINPYTALPNLTGQPAISLPTYETKEG 450 Query: 457 MPLGLQLIGQPFREETLFSVGQIIE 481 +P+G+QLI RE+ L + + E Sbjct: 451 LPMGIQLIAAKGREDLLLGIAEQFE 475 >gi|229166825|ref|ZP_04294573.1| Amidase [Bacillus cereus AH621] gi|228616628|gb|EEK73705.1| Amidase [Bacillus cereus AH621] Length = 511 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 85/273 (31%), Positives = 134/273 (49%), Gaps = 18/273 (6%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +NA E+ A + +R +N Sbjct: 48 VDELQKMVDDGKLSYEELTSIYLFRIQEHDQNGISLNAVTEINPNAMEEARQLDKERFLN 107 Query: 66 GDARDLEGIPIGIKDCFATKGIH-TQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L IP+ +KD T + T A +++L + ++ + +KL + GA +LGK NM Sbjct: 108 KKS-NLYFIPVIVKDNVQTANVMPTSAGTYVLKDWIADEDAMIVKKLKEEGAFVLGKANM 166 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ VA +IGT+ Sbjct: 167 SEWANYLSFTMPSGYSGKKGQNLNPYGPI----TFDTSGSSSGSATVVAADFAPLAIGTE 222 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L ++ GYD Sbjct: 223 TTGSIVAPATQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNSMVGYD 282 Query: 240 ECDATCVNLP---VPDYERALD-QSIQGMTVGI 268 DA + DY + L ++G +GI Sbjct: 283 GKDAMIEKMKDRDRMDYTKELSIDGLKGKKIGI 315 Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G+ IG+ F E+ LF++G E+++ R K Sbjct: 459 VAGYPELAVPAGYDSDGQPVGVVFIGKQFGEKELFNIGYAYEQQSKNRRSPK 510 >gi|186471063|ref|YP_001862381.1| amidase [Burkholderia phymatum STM815] gi|184197372|gb|ACC75335.1| Amidase [Burkholderia phymatum STM815] Length = 457 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 104/397 (26%), Positives = 176/397 (44%), Gaps = 51/397 (12%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P+G+KD T + T S I RP ++ + KL + GA++ GK EFA Sbjct: 75 LAGLPVGVKDLIDTVDMPTAYGSPIYREHRPQADAAIVTKLREYGALVFGKTVTTEFAWR 134 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 GP ++PW + TPGGSS GS+AAV + ++GT T GS+ +PA++ Sbjct: 135 QP------GPTVNPW-----SHAHTPGGSSSGSAAAVGAGIVPLALGTQTVGSVIRPAAY 183 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKA-IAGYDECDATCVNLP 249 G VG KP++G +R G+ A SLD G ++V +A+ +AG + + N Sbjct: 184 CGAVGYKPSFGSIARDGVHPLAASLDHIGFFAQSVETAALAHALFVAGRPDTIESAANWQ 243 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 + L + V P + RL ++ ++ L+ AGA++++I Sbjct: 244 A--WFAPLAAPPRLGIVRTPFDARLQDAQ---KADFEAALAQLRAAGAEVIDIGF----- 293 Query: 310 ALPAYYIISPAEASSNLAR-YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTY 368 +LAR D ++ LRVE + ++ I G Sbjct: 294 -------------RVDLARIVDALQVILRVEAWHAMGPVSEYHRAQLSHHMQALIDEGAA 340 Query: 369 VLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGH 428 + +R D+ L++ R + A G D +++ T A P G ++ Sbjct: 341 MPEARYRDALALQS------ALRAESAALLAGCDALVS-VPATGAAPEGLDDTG------ 387 Query: 429 IYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIG 465 + VF ++ G+PA++VP+ + +PLG Q++G Sbjct: 388 --DPVFCAPWSLLGVPALTVPSGWTAQGLPLGFQIVG 422 >gi|46138797|ref|XP_391089.1| hypothetical protein FG10913.1 [Gibberella zeae PH-1] Length = 1834 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 116/421 (27%), Positives = 170/421 (40%), Gaps = 50/421 (11%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMG 130 L G+P +KD +G T A ++TV KL GA+++GK N+D+FA G Sbjct: 87 LYGVPFAVKDNIDAQGFITTAACPTFRSVPAASDATVVSKLKAAGAILIGKTNLDQFATG 146 Query: 131 SSNETSYYGPV---ISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 S YG V P R + + + G + S+GTDT GS R P Sbjct: 147 LVGTRSPYGAVPNSFDPTRVSGGSSSGSAVVVARG--------IVPFSLGTDTAGSGRVP 198 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 A VG+KPT G S G++ +LD I + TV D+ +L GYD DA Sbjct: 199 AGLNNIVGLKPTRGAISTHGVLPACRTLDCISIFSFTVTDAETVLSIAEGYDISDA---- 254 Query: 248 LPVPDYERALDQSIQ------GMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDA-GAKIV 300 Y R+ + G +V + K SP Q ++ K A+I+ Sbjct: 255 -----YSRSRHDTSSTSFDAFGGSVELLKPNLAICASPKWFGHGNQRSAYEKALIKAEIL 309 Query: 301 EISLPHTQYALPAYYIISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENTRSIGFGQE 358 SL + P + LAR YDG R E I + E S Sbjct: 310 GWSLVPMDFD-PLF----------QLARLLYDGPWVAERYEA--IRDFIERCPSDDVDPV 356 Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418 V+ I+ + ++ + YLR + R AF + D IL PT+PT FP Sbjct: 357 VRKIIVRAQSLSAADVFRGEYLRKE-----LTRKVEHAFAK-FDGILVPTSPT--FPTLD 408 Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 E + S + +T VN A+++PA ++P G+ LI + E LFS + Sbjct: 409 EVHKSPVEENSILGTYTNFVNFLDWSALAIPAGFRADELPFGVTLISNRWNEPCLFSWAK 468 Query: 479 I 479 + Sbjct: 469 V 469 >gi|258543145|ref|YP_003188578.1| amidase [Acetobacter pasteurianus IFO 3283-01] gi|256634223|dbj|BAI00199.1| amidase [Acetobacter pasteurianus IFO 3283-01] gi|256637283|dbj|BAI03252.1| amidase [Acetobacter pasteurianus IFO 3283-03] gi|256640335|dbj|BAI06297.1| amidase [Acetobacter pasteurianus IFO 3283-07] gi|256643392|dbj|BAI09347.1| amidase [Acetobacter pasteurianus IFO 3283-22] gi|256646447|dbj|BAI12395.1| amidase [Acetobacter pasteurianus IFO 3283-26] gi|256649500|dbj|BAI15441.1| amidase [Acetobacter pasteurianus IFO 3283-32] gi|256652486|dbj|BAI18420.1| amidase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655544|dbj|BAI21471.1| amidase [Acetobacter pasteurianus IFO 3283-12] Length = 453 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 123/470 (26%), Positives = 200/470 (42%), Gaps = 50/470 (10%) Query: 22 SAVELVDSYIQAIENSNSQ-MNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIK 79 +A ELV++ + I +S + ++ V A AR A+ DK G A L G+PI +K Sbjct: 21 TARELVENALAHIADSQGEGARTFMSVHATAARGHADAMDKLRCQGQAPSPLAGLPISVK 80 Query: 80 DCFATKGIHTQACSHILDGFRP-HYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYY 138 D F G T+A S +L P ++ +L G + +G+ M EFA ++ Sbjct: 81 DLFDEAGSTTRAGSMVLADAPPASMDAPAIARLKQAGLISIGRTTMTEFAFSGIGINPHF 140 Query: 139 GPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKP 198 G +PWR +K PGGSS G++ +V+ + IG+DTGGS R PA+ TG VG KP Sbjct: 141 GTPANPWRR---DEKRIPGGSSSGAAVSVSDNMAFVGIGSDTGGSCRIPAALTGLVGYKP 197 Query: 199 TYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALD 258 T R S G + + +LD G I RTV D AT + + D D Sbjct: 198 TSSRISTQGTVPLSSTLDSIGSIGRTV-------ACCWAADSLMATG-TIRIQDAPTGRD 249 Query: 259 QSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIIS 318 + +G+ ++ + T+ TW+ +S L G I+E + P I Sbjct: 250 G--HTLRLGMLSTSVMEDMDETVAHTWEDCLSRLSRNGV-ILE------TFTCPPLTEIP 300 Query: 319 PAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSH 378 A + + + + + E RS+ + V RI+ G D Sbjct: 301 KANSKGGFPAAESLAWH--------QHLLETRRSV-YDPFVLQRILRG---YEQTAVD-- 346 Query: 379 YLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVF---- 434 Y+ + R + R + D ++ PT P A + +N+ ++ ++ Sbjct: 347 YIALLQSRAKLIRQAADIMNH-YDAVILPTVPIIAPKINDMNDNA---RYVATNLLLLRN 402 Query: 435 TVAVNMAGLPAISVPAALCEK--KMPLGLQLIGQPFREETLFSVGQIIEK 482 T N L AIS+P C + P+GL ++G+ + LF + +E+ Sbjct: 403 TTIANFLDLCAISLP---CHHAGEAPVGLMVMGRHAEDCDLFHIAAQLER 449 >gi|126454395|ref|YP_001067216.1| amidase [Burkholderia pseudomallei 1106a] gi|167920005|ref|ZP_02507096.1| amidase [Burkholderia pseudomallei BCC215] gi|242314585|ref|ZP_04813601.1| amidase family protein [Burkholderia pseudomallei 1106b] gi|126228037|gb|ABN91577.1| amidase family protein [Burkholderia pseudomallei 1106a] gi|242137824|gb|EES24226.1| amidase family protein [Burkholderia pseudomallei 1106b] Length = 616 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 232 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 291 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 292 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 351 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 352 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 409 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 410 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 453 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 454 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 501 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 502 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 556 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 557 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 609 >gi|258509287|ref|YP_003172038.1| amidase [Lactobacillus rhamnosus GG] gi|257149214|emb|CAR88187.1| Amidase [Lactobacillus rhamnosus GG] gi|259650568|dbj|BAI42730.1| amidase [Lactobacillus rhamnosus GG] Length = 483 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 129/513 (25%), Positives = 210/513 (40%), Gaps = 106/513 (20%) Query: 21 ISAVELVDSYIQAIENSNSQMNA--YIEVVAQKARAAAEESDKRIINGDARDLEGIPIGI 78 +++ +L+D + + N Q+NA + A K AAA + + G+P+ + Sbjct: 17 VTSGDLIDMTAKKLTTRNLQLNAVTWTRFDAAKHEAAA-------LTDTGQPFFGVPLFL 69 Query: 79 KDCFATKGIHTQACSHILDGFRPHYESTVT------QKLWDNGAVMLGKLNMDEFAMGSS 132 K + AC+ G R + T Q L G +++G+ N+ EF + Sbjct: 70 KGLG-----QSLACAPETGGSRLFKNAKATRTNNFVQALQRLGFIIVGQSNVPEFGFKNI 124 Query: 133 NETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTG 192 + + YGP +PW ++PGGSSGG++A VA + + G+D GGSIR PASF+G Sbjct: 125 TDAALYGPARNPWNL-----AYSPGGSSGGAAALVAAGISPLAAGSDGGGSIRIPASFSG 179 Query: 193 TVGIKPTYGRCS---------RLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDA 243 +G+KPT GR + I+FA +TRT+ D+ LL+ +A Sbjct: 180 LIGLKPTRGRVPTGPDEWRGWQGASINFA--------LTRTMADTEALLRGLA------T 225 Query: 244 TCVNLPVPDYERALDQSIQGMTVGIPKEYRLDY---------LSPTIDKTWQQGISWLKD 294 T + P LDQ V + R+ Y +S T ++ + L+ Sbjct: 226 TQLAAPFIAPPLRLDQ------VNDTRPLRIAYTTQSPVGTPVSSTAITAVEKAVDALRA 279 Query: 295 AGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSI 353 AG + E + AL AYY+++ E ++ Y + G V DI Sbjct: 280 AGHTVTEAAPDVDGVALMQAYYLMNGGETAAMFQAYTD-QTGRTVTPNDI---------- 328 Query: 354 GFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSA 413 I Y + Y R+ I ++ F + D++LTPTT +A Sbjct: 329 -------ELITWAIYQAGLHTTAADYSRSLGIWDRAAEAYSR-FHETYDLLLTPTTAKTA 380 Query: 414 FPL---------------GKEENNSGSMGHIYN--------DVFTVAVNMAGLPAISVPA 450 + E + S I++ FT N+ G PAIS+P Sbjct: 381 PRIDAALQSPAIIEKMHHAAELDPSEQQTLIWDLFEPSLTYSPFTQQANLTGAPAISLPT 440 Query: 451 ALCEKKMPLGLQLIGQPFREETLFSVGQIIEKE 483 A+ ++ +PLG+Q RE+ L +G E+ Sbjct: 441 AISDEGLPLGIQFTAAKGREDQLLRIGYWFEQH 473 >gi|254181064|ref|ZP_04887662.1| amidase family protein [Burkholderia pseudomallei 1655] gi|184211603|gb|EDU08646.1| amidase family protein [Burkholderia pseudomallei 1655] Length = 616 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 43/416 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 232 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 291 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 292 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 351 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 352 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 409 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 410 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 453 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 454 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 501 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 502 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 556 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIE 481 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 557 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVE 609 >gi|120403204|ref|YP_953033.1| amidase [Mycobacterium vanbaalenii PYR-1] gi|119956022|gb|ABM13027.1| Amidase [Mycobacterium vanbaalenii PYR-1] Length = 468 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 119/480 (24%), Positives = 185/480 (38%), Gaps = 41/480 (8%) Query: 14 DRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEG 73 D LR +SA ELV++ I E +N +N ++AR A R+ +G Sbjct: 22 DELRRGAVSASELVEAAIARTEKANPALNGLTFEAYERARTRA-----RLHRPYGGFFDG 76 Query: 74 IPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 +P +KD A G+ + + ++ G V +G+ M EF ++ Sbjct: 77 VPSFVKDNVAVAGMPAMNGTDAWEPVPAAHDGDFASAYLATGLVPVGRTRMSEFGFSAAA 136 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E G V +PW TD SSG + AG + A D GGSIR PAS G Sbjct: 137 EHPRLGAVRNPWH----TDHTAGASSSGSGAFVAAGVVPIAH-ANDGGGSIRIPASCNGL 191 Query: 194 VGIKPTYGRCSRLGIISFAP-SLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPD 252 VG+KP+ GR + P + G++TR+VRD+A A Y E + N +P Sbjct: 192 VGLKPSRGRLPLDKDMRQMPLRIVANGVVTRSVRDTA------AFYREMEKVVANPKLPP 245 Query: 253 YERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALP 312 +Q + + + + L SP + + + + L+ G +I I P Q + Sbjct: 246 VGDVTGPGVQRLRIAVCTQSILHEASPEVSELTLKTAALLEQLGHRITVIDNPVPQRFMD 305 Query: 313 AYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSS 372 + + S LA + VR G R G + S+G Q + Sbjct: 306 DFLLY-----WSFLA-FALVRGGRRTFGPSFDRGRLDNLSLGLEQHAARNL--------- 350 Query: 373 RCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYND 432 H L R R T + DV+LTPT +G + + I Sbjct: 351 -----HRLPTAIARLARMRRVTSRLQSTYDVVLTPTLADVPPRVGHLDPTAPYEQIIARL 405 Query: 433 V----FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFR 488 + FT N G PAIS+P + +P+G+ E L + +E+ + R Sbjct: 406 IEWVAFTPLQNATGEPAISLPLGQSQSGLPVGMMFAAGVGEEARLLELAFELEQAQPWRR 465 >gi|293605110|ref|ZP_06687502.1| amidase [Achromobacter piechaudii ATCC 43553] gi|292816513|gb|EFF75602.1| amidase [Achromobacter piechaudii ATCC 43553] Length = 450 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 117/440 (26%), Positives = 195/440 (44%), Gaps = 69/440 (15%) Query: 31 IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKGIHTQ 90 + IE N+ + A++ V A A A A E D+ +G + L+G+P+GIKD T + T+ Sbjct: 49 LDRIEERNADVKAWVRVDADGALARAREWDR---HGRRQLLDGVPLGIKDTIDTADMPTE 105 Query: 91 -ACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMD 149 I G +P ++ V + G +LGK + A+ GP +P Sbjct: 106 LGDPEIFPGRQPDADAPVVTQAHALGFNVLGKNTVSRHAI------MLPGPARNP----- 154 Query: 150 STDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGII 209 TP SS GS+AAVA F+ SIGT T GSI +P++F G VG KPT +GI Sbjct: 155 HDLSRTPAASSAGSAAAVADFMTPLSIGTQTAGSILRPSAFCGAVGFKPTLDAIPYVGIR 214 Query: 210 SFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIP 269 ++ LD G I+R+V D+A+ ++A G DAT LP+ RA V P Sbjct: 215 RYSRVLDVIGPISRSVDDAALFMRAFTGDPRYDAT---LPLRTDFRA--------GVWRP 263 Query: 270 KEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY 329 K++ P + ++++ + L AG + E+++P A + Sbjct: 264 KDWA--DAEPCMRESFEANLRALSAAGVTVKELAMP---------------------AAF 300 Query: 330 DGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRI----MIGTYVLSSRCYDSHYLRARKI 385 D + E +D++ Y+ R + + +I + + Y A Sbjct: 301 DTMG-----EAQDVIMAYDLAREYAAIKRDHAALCDPGLIDYLTMGEGVSAADYAGALDA 355 Query: 386 RTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPA 445 +R F +A + VD ++ P+T LG+ S + + ++++ N P+ Sbjct: 356 ADACRRAFYDAARE-VDAVVMPST------LGEAPLASSTGSSAFIRIWSLLHN----PS 404 Query: 446 ISVPAALCEKKMPLGLQLIG 465 I++P A +PLG Q++G Sbjct: 405 ITLPVARGPHGLPLGFQMVG 424 >gi|173122|gb|AAC41643.1| urea amidolyase [Saccharomyces cerevisiae] Length = 1835 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 119/475 (25%), Positives = 205/475 (43%), Gaps = 70/475 (14%) Query: 22 SAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDC 81 +++ L++S + + +N NA+I +++++ + K N + L G+PI +KD Sbjct: 31 ASLRLLESLLDS-QNVAPVDNAWISLISKENLLHQFQILKSRENKETLPLYGVPIAVKDN 89 Query: 82 FATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGP 140 +G+ T A C + P +S V + L + GA+++GK N+D+FA G S YG Sbjct: 90 IDVRGLRTTAACPSF--AYEPSKDSKVVELLRNAGAIIVGKTNLDQFATGLVGTRSPYGK 147 Query: 141 VISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTY 200 + S + + G S+G +S G + A +GTDT GS R PA+ +G+KPT Sbjct: 148 TPCAF----SKEHVSGGSSAGSASVVARGIVPIA-LGTDTAGSGRVPAALNNLIGLKPTK 202 Query: 201 GRCSRLGIISFAPSLDQAGIITRTVRDSA----ILLKAIAGYDECDATCVNLPVPDYERA 256 G S G++ SLD I + D+ I+ + DE V+ P ++ Sbjct: 203 GVFSCQGVVPACKSLDCVSIFALNLSDAERCFRIMCQPDPDNDEYSRPYVSNPKKNFS-- 260 Query: 257 LDQSIQGMTVGIPKE--YRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAY 314 +T+ IPK + + +P + + + L GA ++EI Sbjct: 261 -----SNVTIAIPKNIPWYGETKNPVL---FSNAVENLSRTGANVIEIDF---------- 302 Query: 315 YIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH-------RIMIGT 367 E LAR EG + E Y+ +S + K I+ G Sbjct: 303 ------EPLLELAR-------CLYEGTWVAERYQAIQSFLDSKPPKESLDPTVISIIEGA 349 Query: 368 YVLSS-RCYDSHYLRA---RKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNS 423 S+ C+ Y R +K+R L+ + VDV+ PT P + P ++ + Sbjct: 350 KKYSAVDCFSFEYKRQGILQKVRRLL---------ESVDVLCVPTCPLN--PTMQQVADE 398 Query: 424 GSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + +T VN+A L A++VPA + +P G+ LIG+ F + L + Sbjct: 399 PVLVNSRQGTWTNFVNLADLAALAVPAGFRDDGLPNGITLIGKKFTDYALLELAN 453 >gi|50294352|ref|XP_449587.1| hypothetical protein [Candida glabrata CBS 138] gi|49528901|emb|CAG62563.1| unnamed protein product [Candida glabrata] Length = 1834 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 114/413 (27%), Positives = 177/413 (42%), Gaps = 43/413 (10%) Query: 71 LEGIPIGIKDCFATKGI-HTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+PI +KD KG T AC + P +STV + L GA+++GK N+D+FA Sbjct: 76 LYGVPIAVKDNIDAKGFPTTAACPSF--SYMPTRDSTVVELLKQAGAIIIGKTNLDQFAT 133 Query: 130 GSSNETSYYG--PVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQP 187 G S YG P + +DK GGSS GS++ VA + ++GTDT GS R P Sbjct: 134 GLVGTRSPYGRTPCVF-------SDKHVSGGSSAGSASVVARGIVPIALGTDTAGSGRVP 186 Query: 188 ASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD-ECDATCV 246 A+ +G+KPT G S G++ SLD + + + D+ LK + D E D Sbjct: 187 AALNNIIGLKPTRGIFSCSGVVPACKSLDCVSVFSMNLSDAEKCLKIMTKLDIENDEYSR 246 Query: 247 NLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISL-P 305 + P L + +TV IPK + Y + + I K GA+I I P Sbjct: 247 SFPA----NPLQSFNKNLTVAIPKNV-MWYGEKENPLLYDRAIDNFKQLGAQIKIIDFEP 301 Query: 306 HTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMI 365 + A Y E + RY R L + + +G I Sbjct: 302 LLELARCLY------EGTWVAERYAATRKFLETSPQQ-----STLDPVVYGI-----IKS 345 Query: 366 GTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGS 425 T ++ ++ Y R +R + E Q +DV+ PT P + P +E + Sbjct: 346 ATKFDAADAFEYEYKRQGILRKV------EVLLQDIDVLCVPTCPLN--PSFEEVDKEPI 397 Query: 426 MGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478 + + +T VN+A L A+++P +P G+ LI + F + L + + Sbjct: 398 LVNSRQGTWTNFVNLADLSALAIPVGFRSDGLPNGVTLIAKKFEDYALLQLAK 450 >gi|126730636|ref|ZP_01746446.1| amidase [Sagittula stellata E-37] gi|126708802|gb|EBA07858.1| amidase [Sagittula stellata E-37] Length = 429 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 124/476 (26%), Positives = 198/476 (41%), Gaps = 62/476 (13%) Query: 4 LNFMAVS--ESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 LN M + ++RD + + ++AV++ + + I + + A+++V A ARA A D Sbjct: 3 LNSMPLGARDTRDAIAAGRLTAVQVTEHRLAQIAEAEPWLRAFVQVDADGARAQARALDA 62 Query: 62 RIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGK 121 G L G+P+G+KD FA G+ A S I +++ GAV+LGK Sbjct: 63 GAGRG---LLHGVPLGVKDIFAVDGLAWTAGSPIWKDRIAGFDAPAVALARRAGAVVLGK 119 Query: 122 LNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTG 181 EFA ++ T R+ +TD+ GGSS GS+AAVA L ++G T Sbjct: 120 TVTTEFASYKASRT----------RNPTATDRSP-GGSSSGSAAAVAAGLVPLALGAQTS 168 Query: 182 GSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDEC 241 GSI +PASF G VG K ++ G+ + A LD G+ V D + ++A++G Sbjct: 169 GSIVRPASFCGEVGFKTSFDTIDSFGVTALARRLDTVGLFACNVPDIGLGIEALSGLALP 228 Query: 242 DATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 AT P P +GI + PT+ W+ + L A Sbjct: 229 LATTAQAPCP--------------IGIFRSVAWPEAEPTLLPAWESFEAALASAA----- 269 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKH 361 T+ ALP + + + AR + E + L NT + Sbjct: 270 ----DTRDALPPGLVAALDAVPALHARL------MVWESAEALAHELNTAPDAMSPGLHG 319 Query: 362 RIMIG-TYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 +I G T S R D L+ + R L + D + TP + + E Sbjct: 320 QIEEGLTVTPSQRHADRMDLQRLRSRALTELDPAAVW----------VTPAACGSAPRFE 369 Query: 421 NNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSV 476 + +G N F ++ GLP +VP E P+G+Q++G P + + +V Sbjct: 370 DGTG------NPAFNRTWSLLGLPCCAVPLLADEVSAPIGVQVVGAPGNDAGVLAV 419 >gi|293607452|ref|ZP_06689790.1| amidase [Achromobacter piechaudii ATCC 43553] gi|292814154|gb|EFF73297.1| amidase [Achromobacter piechaudii ATCC 43553] Length = 507 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 136/492 (27%), Positives = 221/492 (44%), Gaps = 57/492 (11%) Query: 7 MAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIING 66 ++ E R + ++ +S VEL+++ I IE N +NA ++ARA A +++ ++ G Sbjct: 10 LSAVELRRLIGARQLSPVELLEACIARIEAVNPYINAVTATAFERARAEARAAEQAVMAG 69 Query: 67 DARDLEGIPIG-IKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMD 125 DA L +KD T G+ T S I P + T+ +L GA++ K N+ Sbjct: 70 DALGLLHGLPLGVKDLEPTAGLLTTYGSQIYRDHVPTEDVTLVARLRRAGAIVTAKTNVP 129 Query: 126 EFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIR 185 E G+++ + +G +P+ GGSSGGS+AA+A + G+DTGGS+R Sbjct: 130 EMGAGANSRNTVWGATGNPFNP-----NLNAGGSSGGSAAALASDMFPVCTGSDTGGSLR 184 Query: 186 QPASFTGTVGIKPTYGRCSRL-GIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDAT 244 PAS G VG +P+ G + ++ + P + G + RTV D+ + + A AG D D Sbjct: 185 IPASKCGVVGFRPSPGVVPSVRKLLGWTP-ISVVGPMGRTVADACLQMAASAGPDAGD-- 241 Query: 245 CVNLPVPDYERALDQSIQGMTVGIPKEYRLD---YLSPTIDKTWQQGISWLKDAGAKIVE 301 P Y LD +L+P + I++ +D G V+ Sbjct: 242 ------------------------PLSYPLDPLQFLTPGTADLGRLRIAYTEDFGQCDVD 277 Query: 302 ISLPHTQYALPA-----YYIISPAEASSNLAR--YDGVRYGLRVEGKDILEMYENTRSIG 354 + T A A + P E A +D +R V G + + YE Sbjct: 278 DGIRATFRAKIAAMRHLFAACDPIELDFGEAHRCFDVLRAEAFVAG--MRDAYEKDPG-S 334 Query: 355 FGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAF 414 G + +G + C + +A + R LIKR F AF+ D+IL+PTTP S F Sbjct: 335 LGPNSRANFEMGAAMSLKDC---AWAQAEQTR-LIKR-FQRAFDD-YDLILSPTTPVSPF 388 Query: 415 P---LGKEENNSGSMGHIYNDV-FTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 P L E N + Y + T V + PA+++P L + MP G+Q+IG+ + Sbjct: 389 PWTQLYAESINGKRQENYYRWLALTYVVTLTTHPALTLPCGLDQHGMPFGMQIIGRFRGD 448 Query: 471 ETLFSVGQIIEK 482 + + Q +E+ Sbjct: 449 RDVLAAAQGMEQ 460 >gi|313681260|ref|YP_004058998.1| allophanate hydrolase [Sulfuricurvum kujiense DSM 16994] gi|313154120|gb|ADR32798.1| allophanate hydrolase [Sulfuricurvum kujiense DSM 16994] Length = 582 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 192/442 (43%), Gaps = 74/442 (16%) Query: 71 LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAM 129 L G+P +KD G++T A C+ + P + V ++L + GA+ +GK N+D+FA Sbjct: 67 LYGVPFAVKDNIDIAGMNTTAGCAEF--SYLPSEHAFVVKQLIEAGAIPIGKTNLDQFAS 124 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 G S YG I+ + + GGSS GS+ AV + S+GTDT GS R PA+ Sbjct: 125 GLVGTRSPYGEGINLFNP-----DYVSGGSSSGSALAVTAGIVPFSLGTDTAGSGRVPAA 179 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 F VG+KPT G S G++ SLD I + D+ + YD C Sbjct: 180 FGNIVGLKPTRGALSIRGVVPACKSLDCVAIFAQNCEDAGRV------YDLCG------- 226 Query: 250 VPDYERALDQSIQGMT-------VGIPKEYRLDYL-SPTIDKTWQQGISWLKDAGAKIVE 301 + D E + +S + G+P+E +L++ + + + + + L+ G E Sbjct: 227 IVDDEDSFSRSKSCIIPFGGTFRFGVPREEQLEFFGNSAYESLFWESVKKLESLGGIRCE 286 Query: 302 ISL-PHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVK 360 I P + A Y+ AE RY G++ + +L++ TR I Sbjct: 287 IDFSPFIETAKLLYHGPWIAE------RYCGIKSFADTQSDAMLDV---TRGI------- 330 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT-------SA 413 I+ G + ++ Y R +++ + R VD+I+TPT T Sbjct: 331 --ILSGAKPSAMDAFEGFY-RLSELKKISDR-----IMDSVDMIMTPTAGTIYRRDEIRE 382 Query: 414 FPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETL 473 PL N +G+ +T +N+ L A +VPA + +P G+ L + E +L Sbjct: 383 QPLALNTN----LGY-----YTNFMNLLDLSACAVPAGFTSEGLPFGVTLAAPAWYEHSL 433 Query: 474 FSVGQIIEKEAGY----FRPHK 491 +VG + +GY PH+ Sbjct: 434 LNVGAKLHAASGYESGLIEPHQ 455 >gi|169618351|ref|XP_001802589.1| hypothetical protein SNOG_12367 [Phaeosphaeria nodorum SN15] gi|160703599|gb|EAT80180.2| hypothetical protein SNOG_12367 [Phaeosphaeria nodorum SN15] Length = 478 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 106/306 (34%), Positives = 151/306 (49%), Gaps = 39/306 (12%) Query: 52 ARAAAEESDKRIINGDAR-DLEGIPIGIKDCFATKG-IHTQACSHILDGFRPHYESTVTQ 109 A A A+E D+ G R L G+PI IK+ AT ++ A S L G + ++TV Sbjct: 9 ALAIAKELDEERACGTLRGPLHGLPILIKNNIATADKMNNTAGSWSLVGAKVPRDATVAA 68 Query: 110 KLWDNGAVMLGKLNMDEFA----MGSSNETSYYG--PVISPWRSMDSTDKFTPGGSSGGS 163 KL GA++LGK N+ ++A SSN S YG + + + D P GSS GS Sbjct: 69 KLRKAGAIILGKTNLSQWANYRSSNSSNGWSAYGGQTTAAYYPNQD------PSGSSSGS 122 Query: 164 SAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITR 223 A + L S+GT+T GSI P+ + VGIKPT G SR +I + D G + R Sbjct: 123 GVASSLGLAFGSLGTETDGSILSPSQQSNIVGIKPTVGLTSRSLVIPISEHQDTVGPMAR 182 Query: 224 TVRDSAILLKAIAGYDECD---------ATCVNLPVPDYERALD-QSIQGMTVGIPKEY- 272 TV+D+A +L+AI G D+ D + N VPDY A ++ G +G+P+ Sbjct: 183 TVKDAAYILQAIVGPDQYDNYTSAIPWASNSTNHTVPDYVAACQFDALLGKRIGVPRNAI 242 Query: 273 --RLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEAS------- 323 R +P D ++ + LK+AGA IV+ +T Y A Y+ S AE + Sbjct: 243 GSRTLSSAPLYD-AFEAALLVLKNAGAIIVD----NTNYTAYAAYLNSSAEGTVLSGDFG 297 Query: 324 SNLARY 329 NLA Y Sbjct: 298 PNLAAY 303 >gi|28871346|ref|NP_793965.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854597|gb|AAO57660.1| amidase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 442 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 4/161 (2%) Query: 72 EGIPIGIKDCFATKGIHTQACSHILDGFRPHY-ESTVTQKLWDNGAVMLGKLNMDEFAMG 130 +G+P+ KD F G T A + + + P ++ L G V LGK N+ EFA Sbjct: 59 DGVPVAWKDLFDVAGCVTTAGATVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEFAYS 118 Query: 131 SSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASF 190 ++G I+P M PGGSS GS+ AVA + ++GTDT GSIR PA+F Sbjct: 119 GLGLNPHFGTPINP---MSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175 Query: 191 TGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAIL 231 VG + T R SR G+ A +LD G +TR+VRD+ ++ Sbjct: 176 NSLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVI 216 >gi|53720146|ref|YP_109132.1| amidase [Burkholderia pseudomallei K96243] gi|53725187|ref|YP_102266.1| amidase [Burkholderia mallei ATCC 23344] gi|124385490|ref|YP_001026964.1| amidase [Burkholderia mallei NCTC 10229] gi|52210560|emb|CAH36543.1| putative amidotransferase [Burkholderia pseudomallei K96243] gi|52428610|gb|AAU49203.1| amidase family protein [Burkholderia mallei ATCC 23344] gi|124293510|gb|ABN02779.1| amidase family protein [Burkholderia mallei NCTC 10229] Length = 458 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 177/423 (41%), Gaps = 43/423 (10%) Query: 71 LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQ-KLWDNGAVMLGKLNMDEFAM 129 L GIP+ +KD F G T+A S +L P + V +L GAV++G+ NM EFA Sbjct: 74 LAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAADDAVAVARLKRAGAVLVGRTNMSEFAF 133 Query: 130 GSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPAS 189 +YG SP+R D+ GGSS G++A+VA + A ++ TDTGGSIR PA+ Sbjct: 134 SGLGLNPHYGTPRSPYRRDVPGDERIAGGSSSGAAASVADGMAAVALATDTGGSIRIPAA 193 Query: 190 FTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLP 249 G G KPT R + G + + +LD G I +V A++ + +AG + C P Sbjct: 194 LCGLTGFKPTASRIPKQGGVPLSTTLDSFGPIGVSVACCALVDRILAGLEP--HVCAARP 251 Query: 250 VPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQY 309 ++G+ +G+ Y D + + + + L+ AGA + + Sbjct: 252 -----------LEGVRLGVLTNYVTDGMDAHVATSLDAALKHLEAAGAIVSDARF----- 295 Query: 310 ALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYV 369 +P + + R + ++ + + + V RI+ G Sbjct: 296 --------APLDTLPGINRIGFASIEAHAWHRPLVARHRD----AYDPRVLARILKGEPA 343 Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHI 429 + + YL R + + Q D ++ PT P + + + E + + Sbjct: 344 SA-----ADYLDLVAARAALIDEAARTVWQRFDALVAPTVPIAPPRIAELERDDDAFART 398 Query: 430 YNDVF--TVAVNMAGLPAISVPAALCEKK--MPLGLQLIGQPFREETLFSVGQIIEKEAG 485 V A N A+S+P C + P+GL L P ++ L ++GQ +E Sbjct: 399 NALVLRNPSAFNFLDACALSLP---CHPRDTAPVGLMLAAAPHHDDALLAIGQAVEAVLA 455 Query: 486 YFR 488 R Sbjct: 456 TIR 458 >gi|170088028|ref|XP_001875237.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650437|gb|EDR14678.1| predicted protein [Laccaria bicolor S238N-H82] Length = 546 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 133/563 (23%), Positives = 232/563 (41%), Gaps = 108/563 (19%) Query: 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRII-NG 66 + SE +++ +A ++++++I ++++ N EV AR A+E D+ N Sbjct: 5 SASEIVSSIKTGKWTASQVLEAFIARAVLAHAKTNCLTEVFFDSARQRAKELDEHFAANK 64 Query: 67 DARD-LEGIPIGIKDCFATKGIHT------------QACSHILDGFRPHYESTVTQKLWD 113 + + L G+P+ IK+ F +G+ T ++ + + F + + ++L Sbjct: 65 ELKGPLHGVPVSIKEQFEIRGVDTSVGFSQWANEPAESNADVRTEF--GFIKLIVEQLLA 122 Query: 114 NGAVMLGKLNMDE--FAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFL 171 GAV+ K N+ + FA SN +G +P+ DK+T GGSSGG +A +A Sbjct: 123 AGAVLYVKTNIPQTMFAFECSNPV--WGRTTNPY-----NDKYTCGGSSGGEAALLAMDG 175 Query: 172 CAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQ----AGIITRTVRD 227 A IGTD GGS+R PA++ G +KP GR S G P D AG + R+V+D Sbjct: 176 SALGIGTDIGGSLRIPAAYCGVFSLKPASGRISYGGARGPVPGFDGIKSVAGPMGRSVKD 235 Query: 228 SAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQ 287 +L K G LP D + + G SP + + Sbjct: 236 LELLSKVAFGLPSRSHDVAPLPFRDITLS-----SNLRFGYYTHDSFIKASPACQRAVLE 290 Query: 288 GISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMY 347 + L+ G + +EI++P A + ++ A DG + L G D E Sbjct: 291 SVDSLRKQGHECIEIAIPDAAAACNIFVGLTSA---------DGYKTMLSHLGPDPKE-- 339 Query: 348 ENTRSIGFGQEVKHRIM-IGTYVLSSRCYDSHY---LRARKIRTL-------IKRD-FTE 395 ++ + G ++ + I +++ + +D + LRA K +T+ +RD F + Sbjct: 340 KSLFLVTLGPKLNFILRDIAAWIVETFLHDKIFADALRAAKNKTVREYWALAAERDRFVK 399 Query: 396 AFEQGV------DVILTPTTPTSAFPLGKEENNSG-SMGHIYNDVFTVAVNMAGLPAISV 448 F++ V D I+ P P G N S ++ I ++ + V LP V Sbjct: 400 NFDKEVWDKFEIDGIIAPVQALPQLPHGGCNNFSALALATILYNILDIPVGC--LPVTRV 457 Query: 449 -----------------------------------PAALCEKKMPLGLQLIGQPFREETL 473 P A+ K MP+ +Q++G+ + EE + Sbjct: 458 DPTKDQLSQEWIDGLGHGSKLFESGIFTNNKPLYDPEAM--KGMPVNIQIVGRKWEEEKV 515 Query: 474 FSVGQIIE----KEAGYFRPHKW 492 ++ I++ KE G F P W Sbjct: 516 LAMMDIVDLALGKERG-FGPGAW 537 >gi|239820296|ref|YP_002947481.1| Amidase [Variovorax paradoxus S110] gi|239805149|gb|ACS22215.1| Amidase [Variovorax paradoxus S110] Length = 492 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 122/507 (24%), Positives = 220/507 (43%), Gaps = 60/507 (11%) Query: 2 SELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK 61 SE+ ++ R + + +S VE+ ++ + Q+N +I + ++A A A E++ Sbjct: 19 SEICELSAVALRTLVAQRKLSPVEITQEVLRRADAVQPQLNCFITLCHEQAMAQAREAES 78 Query: 62 RIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120 ++ G+ L G+P +KD T + T S + P ++ ++ GA+++G Sbjct: 79 AVMRGEPLGLLHGLPFTVKDIVDTANVRTTYGSLLHRDHVPTQDAVAVARMRQAGAILIG 138 Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180 K EF + +G + W D+T T GGSSGG++A++A + +I TD Sbjct: 139 KTTTSEFGAKCLTDAPLFGSTRNAW---DATR--TSGGSSGGAAASIAAGIAPLAIATDG 193 Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAG------IITRTVRDSAILLKA 234 GGS R PA+ G VG+K LG++ + D G TR V D+A++L+A Sbjct: 194 GGSTRIPAACNGVVGLK------QSLGVVPHSQVQDAFGNYTYVTPTTRNVADTALMLQA 247 Query: 235 IAGYDECDATCVNLPVPDYERALDQ--SIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWL 292 + G D + +P Y AL ++G + +S + ++ ++ L Sbjct: 248 MTGAHGSDPWSLGVPAQPYFDALQPGGDLRGKRILYCATPAGRPISADVAAAFEAALATL 307 Query: 293 KDAGAKIVEISLPHTQYAL-PAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTR 351 + GA++ E +P Y + P + +I N + G L D L Sbjct: 308 RSMGAQLEE--MPGDGYDVEPVWRVI-------NHTSWRGRFAPLAAAHADQLSPS---- 354 Query: 352 SIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPT 411 ++ L+ + +A RT + R E D I TPT Sbjct: 355 ------------LLQQLALAEHVDGVTFQQAMFARTALFRKVQAQLESH-DFIFTPTLSR 401 Query: 412 SAFPLGKEENNSGSM-GHIYNDV------FTVAVNMAGLPAISVPAALCEKKMPLGLQLI 464 +A P+ ++ S + G Y +V +T+ N+ G PAIS+P +P+G+QL+ Sbjct: 402 TALPIDQDLFGSIEIDGEAYAEVRANWFPWTMPFNLTGHPAISLPCGAGRDGLPIGMQLV 461 Query: 465 GQPFREETLFSVGQIIEKEAGYFRPHK 491 G+ FRE+ Q+++ + + H+ Sbjct: 462 GR-FREDQ-----QLLQAASSFEAAHR 482 >gi|148252311|ref|YP_001236896.1| allophanate hydrolase [Bradyrhizobium sp. BTAi1] gi|146404484|gb|ABQ32990.1| allophanate hydrolase [Bradyrhizobium sp. BTAi1] Length = 631 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 118/433 (27%), Positives = 185/433 (42%), Gaps = 52/433 (12%) Query: 61 KRIINGDARDLE--GIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVM 118 +R+ DA L G+P+ +KD G+ T A + P +ST +L GA++ Sbjct: 88 QRLAGQDAAALPLFGVPVAVKDNIDVAGLPTTAACPAF-AYTPTRDSTAVARLRAAGAII 146 Query: 119 LGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGT 178 +GK N+D+FA G S YG +P R PGGSS GS+ AV+ L S+GT Sbjct: 147 IGKTNLDQFATGLVGVRSPYGIPTNPVRG-----DLVPGGSSSGSAVAVSAGLVPLSLGT 201 Query: 179 DTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGY 238 DT GS R PA VG+KP+ G S G++ +LD + + TV D+ L +A Sbjct: 202 DTAGSGRVPAMLNNIVGLKPSLGMISTAGLVPACRTLDCISVFSLTVDDAVAALDVMAAP 261 Query: 239 DECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAK 298 D D + P+ A+ +G+ +GIP+ +L + DK + A+ Sbjct: 262 DPLDPFSRDRPL----GAVTAFPRGVKLGIPRPGQLIFFG---DKAAEAAYGAAV---AR 311 Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFG-- 356 V++ + L +Y AR L EG + E Y R + Sbjct: 312 FVKLGAELVAFDLEPFY---------ETAR-------LLYEGPWVAERYLVIRDLLASDP 355 Query: 357 ---QEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTP--- 410 V I IG S+ + R + +R + +R F VD ++ PT P Sbjct: 356 DAIHPVTREITIGGARGSAADTFAALYRLQALRKVAERTFA-----AVDALVLPTAPTAY 410 Query: 411 TSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFRE 470 T+A L + +G +T VN+ L ++VPAA+ +P G+ L+ + Sbjct: 411 TTAEVLADPILLNSRLG-----TYTNFVNLLDLCGLAVPAAMRSDGIPFGITLLAPAGHD 465 Query: 471 ETLFSVGQIIEKE 483 L S+G+ + Sbjct: 466 AALASLGRAFHAD 478 >gi|163743837|ref|ZP_02151209.1| amidase [Phaeobacter gallaeciensis 2.10] gi|161382875|gb|EDQ07272.1| amidase [Phaeobacter gallaeciensis 2.10] Length = 445 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 125/469 (26%), Positives = 196/469 (41%), Gaps = 50/469 (10%) Query: 38 NSQMNAYIEVVAQKARAAAEESDK-RIINGDARDLEGIPIGIKDCFATKGIHTQACSHIL 96 N +NA +E ++ +A A++ DK R L G+P+ IK G T L Sbjct: 5 NPDLNAVVEDLSSEALGRAQQLDKARASGAPCGPLHGVPVTIKINVDQAGHATSNGVSAL 64 Query: 97 DGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTP 156 ++ V + L D GAV++G+ N EF+ + + +G +PW +P Sbjct: 65 KDLIAADDAPVVKNLQDAGAVVIGRTNTPEFSFRADTDNPLHGRTHNPWGR-----HISP 119 Query: 157 GGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRC--------SRLGI 208 GGSSGG+ AAV + A + G D GGS+R PA+ G V +KP GR + GI Sbjct: 120 GGSSGGAGAAVMAGIGALAHGNDIGGSLRFPAAANGAVTVKPGLGRVPAWNPSQSAERGI 179 Query: 209 ISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDYERALDQSIQGMTVGI 268 + A ++ G++TRT +D + + ++ D D ++P+P + + D I+ V Sbjct: 180 L--AQNMSVQGLLTRTAQDLHLSMPSLIAPDPRDP--FHVPLPWHGASPDGPIR---VAF 232 Query: 269 PKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLAR 328 KE L P +D + + L DAG + E LP Sbjct: 233 SKETYGYDLHPEVDAALEDARAALSDAGYLVEETVLPDV--------------------- 271 Query: 329 YDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDS-HYLRARKIRT 387 +D R G R ++ + + Q V R + Y + L+ RT Sbjct: 272 FDAGRTGYRALMGEVYALMKGDVDAAGSQTV--RDIFAVYFEEFPPFAGVELLQMMAKRT 329 Query: 388 LIKRDFTEAFEQGVDVILTPTTPTSAF-PLGKEENNSGSMGHIYNDVFTVAVNMAGLPAI 446 RD++ F Q ++LTP P F P E +G + V++ A+N GLPA Sbjct: 330 QYARDWS-LFMQRYPLVLTPFLPQPFFRPDRDTEGAAGVHEVLGCAVYSYAMNFLGLPAA 388 Query: 447 SVPAALCE---KKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHKW 492 SVP+ L E P+ +Q+ +RE+ IE G W Sbjct: 389 SVPSRLAELPSGPQPINVQISAPRWREDMAVDACLAIEDRIGRMCDQLW 437 >gi|118619588|ref|YP_907920.1| amidase [Mycobacterium ulcerans Agy99] gi|118571698|gb|ABL06449.1| amidase AmiB2 [Mycobacterium ulcerans Agy99] Length = 462 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 140/484 (28%), Positives = 214/484 (44%), Gaps = 70/484 (14%) Query: 16 LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIP 75 L +++A L++ Y++ IE +S++ AY V AR AE + +R+ G+ L G+P Sbjct: 18 LADGEVTAPMLLEVYLERIERLDSELRAYRVVRYDAAREEAEVAQQRLDAGERLPLLGVP 77 Query: 76 IGIKDCFATKGIHTQACS--HILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133 I IKD G T S H G ++ + ++L GAV++GK N+ E M Sbjct: 78 IAIKDDVDVAGEVTTYGSGGH---GAPAGSDAEMVRRLRAAGAVIIGKTNVPELMMMPYT 134 Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193 E+ +G +PW TPG SSGGS+AAVA L + G+D GGSIR P+++ G Sbjct: 135 ESLTFGATRNPW-----NPARTPGRSSGGSAAAVAAGLAPVAFGSDGGGSIRIPSTWCGV 189 Query: 194 VGIKPTYGRCSRLGIISFAP------SLDQAGIITRTVRDSAILLKAIAGYDECDATCVN 247 G+K R IS P L G I R+V D+A+LL DAT Sbjct: 190 FGLKTQRDR------ISLEPHDGAWYGLSVNGPIARSVLDTALLL---------DATT-T 233 Query: 248 LPVPDYE------RALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVE 301 +P PD E R + ++ IP + + ++ G L++ G +++ Sbjct: 234 VPGPDAEFADAAQREPGRLRIALSTKIPTPLPVRVGQAEVAAVYRAG-GLLRELGHEVIN 292 Query: 302 ISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIG-FGQEVK 360 P AL A Y+ S+ A D + + R+E E TR+I G Sbjct: 293 RD-PDYPAALYANYLPRYLRGISDDA--DALAHPHRLE--------ERTRAIARMGSFFS 341 Query: 361 HRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGKEE 420 R M G LRA + L KR ++ VDV++TP T +G + Sbjct: 342 DRRMAG-------------LRAAEA-ALNKR--IQSIFDDVDVVITPGTANGPSRIGAYQ 385 Query: 421 NNSG--SMGHIYNDVFTVAV-NMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477 ++ + V + V N+ A VP + MP+ +QL+G+P+ E TL S+ Sbjct: 386 RRGAVSTLLLVAQRVPYLQVWNLTCQAAAVVPWDFDDDGMPISIQLVGKPYDEATLLSLS 445 Query: 478 QIIE 481 IE Sbjct: 446 AQIE 449 >gi|315045960|ref|XP_003172355.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma gypseum CBS 118893] gi|311342741|gb|EFR01944.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Arthroderma gypseum CBS 118893] Length = 604 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 134/523 (25%), Positives = 222/523 (42%), Gaps = 71/523 (13%) Query: 21 ISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDK--RIINGDARD-------- 70 ++ E+V ++ IE N ++NA I + A A E + R++ + + Sbjct: 57 LTCREVVTEFLNQIEKYNPRINAIISLDADSLSIADELDARLHRVLESNPNNTFENSSWS 116 Query: 71 -------LEGIPIGIKDCFATKGIHTQA-CSHILDGFRPHYESTVTQKLWDNGAVMLGKL 122 L IP+ +KD F T T A C+ + + +++ V + L D GAV+LGK Sbjct: 117 NDIPLPSLFCIPVLLKDNFDTANHPTTAGCAALSNSAPALHDAPVVKALCDAGAVILGKT 176 Query: 123 NMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGG 182 NM E A+ +S G ++P+ D T GSSGG+ AA+A +GTDT Sbjct: 177 NMHEMALEGLTVSSLGGQTLNPY---DYTRTPG--GSSGGTGAAIASSFAVLGLGTDTVN 231 Query: 183 SIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLK--AIAGYDE 240 S+R PAS ++PT G SR G++ + + D G I R V D A+ L A+A D Sbjct: 232 SLRSPASANSLFSMRPTRGLISRAGVLPVSYTQDTVGPIARCVWDLAVSLNVMAMAKADG 291 Query: 241 CDATCVNLPV--PDYERALDQS-------------IQGMTVGIPKEY--RLDYLSPT-ID 282 T NL P + R LD + ++G+ +G+ + + R D T + Sbjct: 292 WFDTRDNLTALRPRHVRGLDYTNILSRYQGGHDGGLKGVRLGLVEGFINRTDSPETTPVC 351 Query: 283 KTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASSNLARY---DGVRYGLRVE 339 K +S L+ AGA +V ++ ++ + E + Y G+R G Sbjct: 352 KVVDAMVSRLEKAGATVVRVADSIYNSSVILGLDVQAYEYREMVDSYLQAQGLRDGKPRG 411 Query: 340 GKDILEMYE--NTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTL---IKRDFT 394 + + E+Y + F I + ++SS S+ + I L +KR F+ Sbjct: 412 PRTMAELYSKIDNEQDPFLVIPHQYAFIQSALVSSPLNISYAQKRLSINALTLSVKRTFS 471 Query: 395 EAFEQGVDVILTPTTPTSAFPLGKEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCE 454 +D ++ P +G N G G + + G P I+VPA Sbjct: 472 ---SHSLDALIYPQQQNLPVKIGS-RNQHGRNG--------ILAALTGSPVITVPAGFSN 519 Query: 455 KKM--------PLGLQLIGQPFREETLFSVGQIIEKEAGYFRP 489 + + P+G++++G P+ EE L S+ IE + RP Sbjct: 520 RDIFRGIPVGVPIGMEIMGLPWEEERLLSIAARIEALENFRRP 562 >gi|301053486|ref|YP_003791697.1| amidase [Bacillus anthracis CI] gi|300375655|gb|ADK04559.1| amidase [Bacillus cereus biovar anthracis str. CI] Length = 536 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 19/268 (7%) Query: 9 VSESRDRLRSKDISAVELVDSY---IQAIENSNSQMNAYIEVVAQKARAAAEESDKRIIN 65 V E + + +S EL Y IQ + + +N+ E+ A + +R N Sbjct: 73 VDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPNAMEEARKLDQERGRN 132 Query: 66 GDARDLEGIPIGIKDCFAT-KGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNM 124 + +L GIP+ +KD T K + T A +++L + ++T+ ++L + GA +LGK NM Sbjct: 133 KKS-NLYGIPVVVKDNVQTSKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANM 191 Query: 125 DEFA-----MGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179 E+A S + G ++P+ + F GSS GS+ V ++GT+ Sbjct: 192 SEWANYLSFTMPSGYSGKKGQNLNPYDPI----TFDTSGSSSGSATVVTADFAPLAVGTE 247 Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239 T GSI PA+ VG++P+ G SR GII A +LD AG + RTV+D+A L + GYD Sbjct: 248 TTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNEMIGYD 307 Query: 240 ECDATCVNLPVPDYER---ALDQSIQGM 264 E D + V D ER D SI G+ Sbjct: 308 EKD--VMTEKVKDKERIDYTKDLSIDGL 333 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 440 MAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYFRPHK 491 +AG P ++VPA P+G +G+ F E+ LF++G E+++ +P K Sbjct: 484 VAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSKNRKPPK 535 >gi|319440988|ref|ZP_07990144.1| amidase [Corynebacterium variabile DSM 44702] Length = 479 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 132/462 (28%), Positives = 198/462 (42%), Gaps = 42/462 (9%) Query: 27 VDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDARDLEGIPIGIKDCFATKG 86 V + + I + +NA+ V+A +A A A + D R+ L G+P+ +K KG Sbjct: 41 VRAALTRIARYDRDLNAFQTVLADEALATATDLD-RLEPAQRGRLHGVPVAVKAEIDVKG 99 Query: 87 IHTQACSHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWR 146 + T + + ++ V QKL D GAV++G M EF +T YG +P Sbjct: 100 VVTTFGTRA-NTTPATADALVVQKLRDAGAVIIGVTRMPEFGAWPYTQTDGYGVTRNP-- 156 Query: 147 SMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRL 206 TPGG