PSIBLAST alignment of GI: 254780978 and protein with PDB id: 1m21

>gi|24987671|pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503
>gi|24987672|pdb|1M21|B Chain B, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 121/493 (24%), Positives = 197/493 (39%), Gaps = 16/493 (3%)

Query: 4   LNFMAVSESRDRLRSKDISAVELVDSYIQAIENSN---SQMNAYIEVVAQKARAAAEESD 60
                V++ + R+ + ++ +  L  +Y+Q I   +    ++ A IE+     + AAE   
Sbjct: 8   YAETDVADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPDALKEAAERDR 67

Query: 61  KRIINGDARDLEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVMLG 120
           +R        L GIP+ +KD      + T A S  L G     ++ + ++L D GAV+LG
Sbjct: 68  ERRDGRLRGPLHGIPLLLKDNINAAPMATSAGSLALQG-FRPDDAYLVRRLRDAGAVVLG 126

Query: 121 KLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDT 180
           K N+ E+A    N++                   +P GSS GS+ AVA  L + +IGT+T
Sbjct: 127 KTNLSEWANFRGNDSISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTET 186

Query: 181 GGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDE 240
            GSI  PA+  G VG+KPT G  SR GII  + S D AG + R+V D+A +L AIAG D+
Sbjct: 187 DGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAGRDD 246

Query: 241 CDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAG--AK 298
            D     +P         +       G         L            +  +     A 
Sbjct: 247 ADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLIEQAATELRRAGAV 306

Query: 299 IVEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRVEGKDILEMYENTRSIGFGQE 358
           +V + LP+      A   +   E  + L RY            D++   +       G  
Sbjct: 307 VVPVELPNQGAWAEAERTLLLYEFKAGLERYFNTHRAPLRSLADLIAFNQAHSKQELGLF 366

Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAF-EQGVDVILTPTTPTSAFPLG 417
            +  ++                R+   R         A     +D ++ PTT   A+P+ 
Sbjct: 367 GQELLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAHQLDALVAPTT-GVAWPIR 425

Query: 418 KEENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVG 477
            E ++     +        A  +AG P+++VP       +P+GL  +G  + E  L  + 
Sbjct: 426 SEGDDFPGESY-------SAAAVAGYPSLTVPMGQI-DGLPVGLLFMGTAWSEPKLIEMA 477

Query: 478 QIIEKEAGYFRPH 490
              E+     RP 
Sbjct: 478 YAYEQRTRARRPP 490