RPSBLAST alignment for GI: 254780978 and conserved domain: KOG1211

>gnl|CDD|36425 KOG1211, KOG1211, KOG1211, Amidases [Translation, ribosomal structure and biogenesis]. Length = 506
 Score =  377 bits (969), Expect = e-105
 Identities = 200/484 (41%), Positives = 279/484 (57%), Gaps = 16/484 (3%)

Query: 16  LRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDAR-DLEGI 74
           L S  +++  +++SY++ I       NA I V+ ++A   AEE  +R  NG  +  L+G+
Sbjct: 27  LSSGLLTSKRIIESYLERINKWKPL-NAKITVINEEALKQAEEVTRRRKNGMEKGPLQGV 85

Query: 75  PIGIKDCFATKGIHTQAC-SHILDGFRPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSN 133
           PI IKD F TK   T    S +L+ + P  ++TV +KL + GA++LGK NMDEFAMGSS 
Sbjct: 86  PIAIKDNFDTKDKPTTTAASWMLEHYNPPKDATVVKKLREAGAIILGKTNMDEFAMGSSG 145

Query: 134 ETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTDTGGSIRQPASFTGT 193
           E S+YG   +P      +    PGGSS GS+AAVA  LC  ++GTDTGGS+R PA++ G 
Sbjct: 146 ENSHYGTTRNPL-----SLWRVPGGSSSGSAAAVAAGLCDFALGTDTGGSVRVPAAYCGV 200

Query: 194 VGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATCVNLPVPDY 253
           VG KPTYGR SR G+I  + SLD  GI  RTV D+  +L AI G DE D+T +  P P  
Sbjct: 201 VGFKPTYGRVSRFGVIPLSNSLDTVGIFARTVYDAVEVLGAIVGIDELDSTTLAQPAPFP 260

Query: 254 ---ERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYA 310
              E      + G+ +GIPKE  +  LS  +   W++    L   GAK+ E+SLP T   
Sbjct: 261 IVLELIGSMDLSGLRIGIPKERLVQGLSSGVLSLWEELADLLGSLGAKVNEVSLPTTING 320

Query: 311 LPAYYIISPAEASSNLARYDGVRYGLRVEGKDILE-MYENTRSIGFGQEVKHRIMIGTYV 369
           L  Y + S +EA+SNLARYDG+ YG R + K   E +Y  +RS GF  EVK RI+ G Y+
Sbjct: 321 LCGYSLSSASEAASNLARYDGILYGHRRDFKVADEEVYALSRSFGFNFEVKGRILSGNYI 380

Query: 370 LSSRCYDSHYLRARKIRTLIKRDFTE--AFEQGVDVILTPTTPTSAFPLGKEENNSGSMG 427
           L+      ++ +A ++R LI+ DF    A  +GVD ++TPT P   +     E  +    
Sbjct: 381 LAKENDQDYFEKALEVRRLIQEDFNRRKAALEGVDYLVTPTAPPPLYRE--FEKETLFAV 438

Query: 428 HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIEKEAGYF 487
              +D+FT   N+AGLPAIS+P  L    +P+GLQ++G  F E TL  +   I +   Y 
Sbjct: 439 STLDDIFTQPANLAGLPAISIPVGLKNGGLPIGLQIMGGAFAEPTLIDLALAIGQAKFYL 498

Query: 488 RPHK 491
            P K
Sbjct: 499 GPDK 502