RPSBLAST alignment of GI: 254780978 and SCOP domain: d2f2aa1

Alignment
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485
 Score =  438 bits (1126), Expect = e-124
 Identities = 216/492 (43%), Positives = 315/492 (64%), Gaps = 12/492 (2%)

Query: 1   MSELNFMAVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESD 60
           MS + + +V      ++ K I   ++V     AIE ++  + +++ +  + A   A+E D
Sbjct: 1   MS-IRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELD 59

Query: 61  KRIINGDARD-LEGIPIGIKDCFATKGIHTQACSHILDGFRPHYESTVTQKLWDNGAVML 119
           +          L GIP+GIKD   T G+ T   S +L+GF P YESTV +KL    AV++
Sbjct: 60  ELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLI 119

Query: 120 GKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSAAVAGFLCAASIGTD 179
           GKLNMDEFAMG S ETSY+   ++P+       K  PGGSSGGS+AAVA  L   S+G+D
Sbjct: 120 GKLNMDEFAMGGSTETSYFKKTVNPFD-----HKAVPGGSSGGSAAAVAAGLVPLSLGSD 174

Query: 180 TGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYD 239
           TGGSIRQPA++ G VG+KPTYGR SR G+++FA SLDQ G +TR V+D+AI+L+AI+G D
Sbjct: 175 TGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGAD 234

Query: 240 ECDATCVNLPVPDYERALDQSIQGMTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKI 299
             D+T   +   D+   + + I+G+ V +PKEY  + ++  + +  Q  +  LK  GA +
Sbjct: 235 VNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVV 294

Query: 300 VEISLPHTQYALPAYYIISPAEASSNLARYDGVRYGLRV-EGKDILEMYENTRSIGFGQE 358
            E+SLP+T++ +P+YY+I+ +EASSNL+R+DG+RYG    E   + E+Y+ +RS GFG+E
Sbjct: 295 EEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKE 354

Query: 359 VKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVILTPTTPTSAFPLGK 418
           VK RI +GT+ LSS  YD++Y +++K+RTLIK DF + FE   DV++ PT PT+AF LG+
Sbjct: 355 VKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFEN-YDVVVGPTAPTTAFNLGE 413

Query: 419 EENNSGSMGHIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQ 478
           E ++  +M    ND+ T  VN+AGLP ISVP        P+GLQ IG+PF E+TL+ V  
Sbjct: 414 EIDDPLTMYA--NDLLTTPVNLAGLPGISVPCGQ-SNGRPIGLQFIGKPFDEKTLYRVAY 470

Query: 479 IIEKEAGYFRPH 490
             E +      +
Sbjct: 471 QYETQYNLHDVY 482

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]