HHsearch alignment of GI: 254780979 and MMDB domain: 1zq1_C_1-280_408-456

>1zq1_C (C:1-280,C:408-456) Glutamyl-tRNA(Gln) amidotransferase subunit E; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi}
Probab=100.00  E-value=0  Score=778.37  Aligned_cols=279  Identities=27%  Similarity=0.395  Sum_probs=265.1

Q ss_pred             CCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC----CCCCCHHHCCC----CCCCCCC------------------
Q ss_conf             454780338989997888689865558842468987----65206130268----9888737------------------
Q gi|254780979|r   17 GTTGDWEVVIGIEVHAQLSVVSKLFSGASVNFGAEP----NTQVSFFDAAM----PGMLPIL------------------   70 (500)
Q Consensus        17 ~~~~~~e~vIGLEiH~qL~t~tKlFc~c~~~~~~~p----Nt~v~~~~~g~----PG~lP~l------------------   70 (500)
                      -+.++|+++|||||||||+|+ ||||+|+++|+++|    |+++||+|.++    ||+||++                  
T Consensus         8 ~~~~~~~~~iGLEIH~QL~T~-KLFc~c~t~~~~~p~~~~n~~~~p~~s~l~~~~Pgalp~~~~~~~~~y~~~~~~tclv   86 (329)
T 1zq1_C            8 FNYEELGLKVGLEIHRQLDTK-KLFSPVPSELSDKVEFTFQRRLRPTMSELGEIDPAALEEFKKGRVYVYEGNYELTDLV   86 (329)
T ss_dssp             SCTTTTTCCBEEEEEEEBSSB-CTTSSCBCCCCSCCCEEEEECCCCCEETTSCBCHHHHHHHHTTCEEEEEECTTTCBGG
T ss_pred             CCHHHHCCEEEEEEEEEECCC-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCC
T ss_conf             598996967879999877774-0378998767777654456777873013466786424666421000002454310001


Q ss_pred             ----------CHHHHHHHHHHHHHHCCEECCCCEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf             ----------8999999999877829762442013113212376788820144544201533899970677777410379
Q gi|254780979|r   71 ----------NGRCVQQAVMTGLGLNAHINKYSVFARKNYFYPDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQFRTIE  140 (500)
Q Consensus        71 ----------N~~av~~ai~~~~al~~~i~~~~~fdRK~YfYpDlpkgyQiTQ~~~Pi~~~G~l~~~~~~~~~~~~~~~~  140 (500)
                                |++||++|+++|+||||+|+++++||||||||||||+||||||+   ||.||+++++.          ++
T Consensus        87 e~Deepp~~~N~~Av~~ai~~a~aLn~~i~~~~~f~RK~yfy~dlp~GyQiTq~---ia~~G~i~~~~----------~~  153 (329)
T 1zq1_C           87 YMDEEPPRGPDREALEVALQIAYLLNAKPVDEVYYMRKIVIDGSNVSGFQRTAI---IATDGKVETPW----------GA  153 (329)
T ss_dssp             GTTSSCCCCCCHHHHHHHHHHHHHTTCEECSEECCEEEECSSSSSTTSEEEECE---EEEEEEECCTT----------CC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEE---EECCCEEECCC----------CC
T ss_conf             245567776689999999999998089845356562047778887667761027---63783896136----------75


Q ss_pred             EEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC
Q ss_conf             84236665202310011567871488661578612576303652778999999999999986420456764322011257
Q gi|254780979|r  141 VGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEIVTKPDMRSSLEAKAFLTKLRSILRYLGTCDGNMEEGSMRADV  220 (500)
Q Consensus       141 v~I~~i~lEED~gk~~h~~~~~~slvD~NRaGvPLiEIVT~Pd~~s~~ea~~~~~~l~~ilr~~gisd~~meeGslR~Dv  220 (500)
                      |+|.+|||||||||++|+. +++|++||||||+|||||||+|||+||+||++|+++|+++|||+|+|+.  ++|+|||||
T Consensus       154 I~I~~I~LEEDaak~ih~~-~~~~l~DlNR~GiPLiEIvTePdi~speeA~~~~~~l~~llr~~g~~~~--~~GsiR~Dv  230 (329)
T 1zq1_C          154 VGIPTICLEEDAARIIERK-DKEVIYRLDRLGIPLIEISTTPDIHHPEQAKVVAKFIGDALRATKKVKR--GLGTIRQDL  230 (329)
T ss_dssp             EEEEEEEEEECCCEEEEEE-TTEEEEESTTTTCEEEEEECCTTBCSHHHHHHHHHHHHHHHHHTSCBCC--SSTTEEEEE
T ss_pred             CCCEEEEEECCCCCCCCCC-CCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCC
T ss_conf             3512576544667623579-9954785045787148986168877989999999999999999974567--787322566


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------CCCEEEEEECCCCCCCC
Q ss_conf             54321376667886222354024659999999999999973139800344323375-------54336653035667777
Q gi|254780979|r  221 NVSVCRPGEAWGTRCEVKNVNSIRFLGLAIEYEARRQIAILEDGGHIRQETRLFDP-------SKNETRSLRTKEDALDY  293 (500)
Q Consensus       221 NVSi~~~~~~~GtRvEIKNlnS~~~i~~AI~yEi~RQ~~ll~~G~~v~qETR~~d~-------~~~~T~~mR~KE~a~DY  293 (500)
                      ||||     .+|+||||||||||++|++||+||+.||.++|+.|+++.||||+||+       ..|.|.+||+.++++  
T Consensus       231 NVSi-----~~G~RvEIKNvnS~~~I~~aI~~E~~RQ~~lLe~g~~i~~eTr~~dp~etr~a~~~g~t~~~rp~pg~a--  303 (329)
T 1zq1_C          231 NVSI-----KGGARIEIKGVQELDMIPIIIEREVERQLNLLKIRDELRKRGVKPKPEETRRALPDGNTEYMRPLPGKA--  303 (329)
T ss_dssp             EECC-----TTSCCEEEECCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGCCCEEEECTTSCEEEEECCCCCC--
T ss_pred             CCCC-----CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEECCCCCCCC--
T ss_conf             7556-----898467511343478899999999999999997000233213555563010347889875400001346--


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             83327787731269999999885302
Q gi|254780979|r  294 RYFSEPDLLPLEIDEDFIRAIKKQIP  319 (500)
Q Consensus       294 RyfPEPDLPpi~is~e~i~~i~~~lP  319 (500)
                      |||||+|+||+.|++++++.+++.+|
T Consensus       304 rmypetd~~~~~~~~~~~~~~~~~~p  329 (329)
T 1zq1_C          304 RMYPETDIPPLRIPDDLKKKIKENLP  329 (329)
T ss_dssp             CEEECTTSCCEECCHHHHHHHHTSCC
T ss_pred             CCCCCCCCCCEECCHHHHHHHHHHHH
T ss_conf             76899998887458999999998642