HHsearch alignment of GI: 254780979 and MMDB domain: 2d6f_C_446-619
>2d6f_C (C:446-619) Glutamyl-tRNA(Gln) amidotransferase subunit E; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus}
Probab=99.97 E-value=3.5e-32 Score=256.99 Aligned_cols=173 Identities=22% Similarity=0.377 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 83689886432026889998887641136789886402430245777765457887643387400064898999999988
Q gi|254780979|r 321 LPDAKRERFIGEFGISLYDASVLVSDKSIADYFEKLAVNRDKKIVANWVINDLLGVLNRSGKSIEDTPISPNQLGELIDL 400 (500)
Q Consensus 321 lP~~~~~rl~~~yGLs~~dA~~L~~~~~la~~FE~v~~~~~pk~~Anwi~~el~~~ln~~~~~~~~~~i~p~~laeLi~l 400 (500)
||+++++||+++||||+++|.+|+++..++.|++.+....+|+.++|||.+++.+..+ . .++..+++|++|++|+.+
T Consensus 1 LP~~~~~rl~~~ygls~~~a~~L~~~~~~~~f~~~~~~~~~~k~~~~~l~~~l~~l~~-~--~~~~~~i~~~~l~~l~~~ 77 (174)
T 2d6f_C 1 LPSEKKERIMRDYGLSEDLASQLVKRNLVDEFEALTEFRVDTTVIASLLAYTLRELRR-E--GHDVDGLGLDELRDAIKL 77 (174)
T ss_dssp CHHHHHHHHHHTTCCCHHHHHHHHHTTCTTTC--------CCHHHHHTTTTHHHHHTC----------------------
T ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-C--CCCCCCCCHHHHHHHHHH
T ss_conf 9899999999873865778988750576899988875156546677789999999986-6--899777999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 86387314789999999981799988999963987618988999999999983999899752721322658999999728
Q gi|254780979|r 401 IIDGTISGKIAKDIFNILWEKGGTPKEIVEELGLRQVTDLSAIEKVVDEVINSNPNNVARIATKPNLVSWFVGQVMKNTG 480 (500)
Q Consensus 401 i~~g~Is~~~aK~il~~l~~~~~~p~~iie~~gL~~isD~~eL~~iv~eVI~~np~~V~~~kgk~ka~gfLvGqVMK~tk 480 (500)
+++|+||..++|+++..+++++.+|.++++++|+.++|| ++|+.+|+++|++||++|++|+ ++++|||||||||+|+
T Consensus 78 v~~~~is~~~ak~~l~~~~~~~~~~~~ii~~~~l~~isd-eel~~~v~~vi~~n~~~v~~~k--~k~~g~liG~vMk~t~ 154 (174)
T 2d6f_C 78 LEVGKISKDALRDIVACMADEGLAAEDAARKLNLLLLAE-DEIESIIQEIVEGNLDMISERG--MGAMGPLMGQAMGRLR 154 (174)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCH-HHHHHHHHHHHHHCHHHHHHHH--CCCCCCHHHHHHHHHC
T ss_conf 985987579999999999857999999999779912698-9999999999997999999985--8983318999999867
Q ss_pred CCCCHHHHHHHHHHHHCCC
Q ss_conf 9778899999999970788
Q gi|254780979|r 481 GKANPSIVQKMLKEKLGIK 499 (500)
Q Consensus 481 GkAdpk~v~~lL~e~L~~k 499 (500)
|||||+.|+++|+++|+-+
T Consensus 155 G~ad~~~v~~~l~~~L~~~ 173 (174)
T 2d6f_C 155 GRADGKVVNRILREKIQER 173 (174)
T ss_dssp -------------------
T ss_pred CCCCHHHHHHHHHHHHHHH
T ss_conf 9979999999999999831