HHsearch results for GI: 254780979 and protein with PDBid: 1zq1_C
>1zq1_C Glutamyl-tRNA(Gln) amidotransferase subunit E; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: a.182.1.2 d.74.4.1 d.128.1.5
Probab=100.00 E-value=0 Score=1156.04 Aligned_cols=449 Identities=27% Similarity=0.416 Sum_probs=412.0
Q ss_pred CCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC----CCCCCHHHCCC----CCCCCCC------------------
Q ss_conf 454780338989997888689865558842468987----65206130268----9888737------------------
Q gi|254780979|r 17 GTTGDWEVVIGIEVHAQLSVVSKLFSGASVNFGAEP----NTQVSFFDAAM----PGMLPIL------------------ 70 (500)
Q Consensus 17 ~~~~~~e~vIGLEiH~qL~t~tKlFc~c~~~~~~~p----Nt~v~~~~~g~----PG~lP~l------------------ 70 (500)
.+.+.|+.+||||||+||+|+ ||||+|+++|+++| |+++||+|.++ ||+||++
T Consensus 8 ~~~~~~~~~iGLEiH~QL~T~-KlFc~c~~~~~~~~~~~~~~~~~~~~~~l~~~~Pgalp~~~~~~~~~~~~~~~~~~l~ 86 (633)
T 1zq1_C 8 FNYEELGLKVGLEIHRQLDTK-KLFSPVPSELSDKVEFTFQRRLRPTMSELGEIDPAALEEFKKGRVYVYEGNYELTDLV 86 (633)
T ss_dssp SCTTTTTCCBEEEEEEEBSSB-CTTSSCBCCCCSCCCEEEEECCCCCEETTSCBCHHHHHHHHTTCEEEEEECTTTCBGG
T ss_pred CCHHHHCCEEEEEEEEEECCC-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
T ss_conf 698997967879999876773-1478998767777654456777873013466787524555421000002454421001
Q ss_pred ----------CHHHHHHHHHHHHHHCCEECCCCEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf ----------8999999999877829762442013113212376788820144544201533899970677777410379
Q gi|254780979|r 71 ----------NGRCVQQAVMTGLGLNAHINKYSVFARKNYFYPDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQFRTIE 140 (500)
Q Consensus 71 ----------N~~av~~ai~~~~al~~~i~~~~~fdRK~YfYpDlpkgyQiTQ~~~Pi~~~G~l~~~~~~~~~~~~~~~~ 140 (500)
|++||++|+++|+||||+|++.++||||||||||||||||||| |||.||+++++. ++
T Consensus 87 ~~~~~p~~~~N~~Av~~ai~~~~alnc~i~~~~~f~RK~yfypd~p~gyQitq---~i~~~G~i~~~~----------~~ 153 (633)
T 1zq1_C 87 YMDEEPPRGPDREALEVALQIAYLLNAKPVDEVYYMRKIVIDGSNVSGFQRTA---IIATDGKVETPW----------GA 153 (633)
T ss_dssp GTTSSCCCCCCHHHHHHHHHHHHHTTCEECSEECCEEEECSSSSSTTSEEEEC---EEEEEEEECCTT----------CC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEE---EEECCEEEECCC----------CC
T ss_conf 24667887668999999999999819972435556026761888777634036---863773895357----------71
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC
Q ss_conf 84236665202310011567871488661578612576303652778999999999999986420456764322011257
Q gi|254780979|r 141 VGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEIVTKPDMRSSLEAKAFLTKLRSILRYLGTCDGNMEEGSMRADV 220 (500)
Q Consensus 141 v~I~~i~lEED~gk~~h~~~~~~slvD~NRaGvPLiEIVT~Pd~~s~~ea~~~~~~l~~ilr~~gisd~~meeGslR~Dv 220 (500)
|+|.||||||||||++|+. +++|+|||||||+|||||||+|||+||+||++|+++||++|||+|+|+++| |||||||
T Consensus 154 i~I~rihLEEDagK~~h~~-~~~s~vD~NRaGvPLiEIVTePd~~speeA~~~~~~l~~~lr~~~~~~~~~--Gs~R~Dv 230 (633)
T 1zq1_C 154 VGIPTICLEEDAARIIERK-DKEVIYRLDRLGIPLIEISTTPDIHHPEQAKVVAKFIGDALRATKKVKRGL--GTIRQDL 230 (633)
T ss_dssp EEEEEEEEEECCCEEEEEE-TTEEEEESTTTTCEEEEEECCTTBCSHHHHHHHHHHHHHHHHHTSCBCCSS--TTEEEEE
T ss_pred CCEEEEEEECCCCCCCCCC-CCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCC
T ss_conf 6527898602345212578-995478104689756898506886799999999999999999986325778--7423566
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q ss_conf 543213766678862223540246599999999999999731--------------------------------------
Q gi|254780979|r 221 NVSVCRPGEAWGTRCEVKNVNSIRFLGLAIEYEARRQIAILE-------------------------------------- 262 (500)
Q Consensus 221 NVSi~~~~~~~GtRvEIKNlnS~~~i~~AI~yEi~RQ~~ll~-------------------------------------- 262 (500)
||||+ +||||||||+|||++|++||+||+.||+++|+
T Consensus 231 NVSv~-----~g~rvEIKNlns~~~i~~aie~Ei~RQ~~ll~~~~~~~~~~~~~~~~~~~~~dvT~~f~~~~sk~v~~~l 305 (633)
T 1zq1_C 231 NVSIK-----GGARIEIKGVQELDMIPIIIEREVERQLNLLKIRDELRKRGVKPKDIKEEFYDVTDIFENTKSKIIARVI 305 (633)
T ss_dssp EECCT-----TSCCEEEECCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGSCCCCEECTTTTTTCSCHHHHHHH
T ss_pred CCCCC-----CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
T ss_conf 63468-----9854885066568899999999999999999724466541467665664202312321344138888775
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780979|r 263 -------------------------------------------------------------------------------- 262 (500)
Q Consensus 263 -------------------------------------------------------------------------------- 262 (500)
T Consensus 306 ~~gg~v~~~~l~~~~g~~g~~~~~~~Rlg~Ela~~aK~~v~Gi~HsDElp~ygi~~~ev~~i~~~l~~~~~dafil~~~~ 385 (633)
T 1zq1_C 306 KKGGKVLAIKLPKFRGLIGREIQPGRRLGTEFADRAKKYVPGIFHIDELPNYGISQEEVNKVIERLNLSEEDAFVLVAAE 385 (633)
T ss_dssp HTTCEEEECEETTCTTTSSSEEETTEEHHHHHHHHHTTTCSCCEEGGGCSBTTBCHHHHHHHHHHTTCCSSCEEEEEEES
T ss_pred HCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 05875898642665554454457664100466777753247766644456667527889999987368855445785160
Q ss_pred -----------------CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
Q ss_conf -----------------398003443233755433665303566777783327787731269999999885302483689
Q gi|254780979|r 263 -----------------DGGHIRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEIDEDFIRAIKKQIPELPDAK 325 (500)
Q Consensus 263 -----------------~G~~v~qETR~~d~~~~~T~~mR~KE~a~DYRyfPEPDLPpi~is~e~i~~i~~~lPelP~~~ 325 (500)
+|+.|.||||+||++ +.|.+||+|+ .||||||||||||+.|+++||++++++|||||+++
T Consensus 386 ~~~~~~a~~~v~~R~~E~g~~I~QETR~~d~d-g~T~~mR~~~--~DYRYFPEPDLPPl~Is~e~Ie~ir~~LPELP~~r 462 (633)
T 1zq1_C 386 EEKAKNALREVIKRAREAIEGVPEETRRALPD-GNTEYMRPLP--GKARMYPETDIPPLRIPDDLKKKIKENLPELPQAK 462 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCEEEECTT-SCEEEEECCC--CCCCEEECTTSCCEECCHHHHHHHHTSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCEEEECCCC--CCCCCCCCCCCCCEECCHHHHHHHHHHCCCCHHHH
T ss_conf 88888778877555664279765301244788-9875300025--56787999997887628999999998689987999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 886432026889998887641136789886-4024302457777654578876433874000648989999999888638
Q gi|254780979|r 326 RERFIGEFGISLYDASVLVSDKSIADYFEK-LAVNRDKKIVANWVINDLLGVLNRSGKSIEDTPISPNQLGELIDLIIDG 404 (500)
Q Consensus 326 ~~rl~~~yGLs~~dA~~L~~~~~la~~FE~-v~~~~~pk~~Anwi~~el~~~ln~~~~~~~~~~i~p~~laeLi~li~~g 404 (500)
++||+++||||+++|.+|++++ +++||++ +..+.+||.+|||++++|.+++++ +...+++|++|++|+.|+.+|
T Consensus 463 ~~R~~~~ygLs~~dA~iL~~~~-~~~~Fee~v~~~~~pk~aanwl~~~L~~~~~e----~~~~~i~~~~la~Li~lv~~g 537 (633)
T 1zq1_C 463 VERYVKEYKLDRSLAQTLVDDE-RDELFEELVSMGVKPSLAASILVVVLKGLRKE----VPIENVTDEHIREAFQLYLEG 537 (633)
T ss_dssp HHHHHTTTCCCHHHHHHHHHTS-THHHHHHHHHTTCSTTHHHHHHHHTTCC-----------------------------
T ss_pred HHHHHHHCCCCHHHHHHHHCCH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHHHHCC
T ss_conf 9999997199999999986222-37889999873888899999999999987431----776789999999999999769
Q ss_pred CCCHHHHHHHHHHHHHC-CCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 73147899999999817-99988999963987618988999999999983999899752721322658999999728977
Q gi|254780979|r 405 TISGKIAKDIFNILWEK-GGTPKEIVEELGLRQVTDLSAIEKVVDEVINSNPNNVARIATKPNLVSWFVGQVMKNTGGKA 483 (500)
Q Consensus 405 ~Is~~~aK~il~~l~~~-~~~p~~iie~~gL~~isD~~eL~~iv~eVI~~np~~V~~~kgk~ka~gfLvGqVMK~tkGkA 483 (500)
+||.++||+||.+|+.+ +++|.+||+++||.|+||+ +|+++|++||++||++|++++ .+++|||||||||+|||||
T Consensus 538 ~Is~~~aK~vl~~~~~~~~~~~~~Iiee~gL~qisD~-eL~~iV~eVi~~Np~~Vk~~k--~~a~gfLvGqVMK~tkGkA 614 (633)
T 1zq1_C 538 KIAKEAFEEIFKELARNPSKSAREVAEEKGLTLLSEE-EVTRIIEEVIQQNIEVVKAKG--MGAMGLIMGRVMAKVRGKA 614 (633)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHH-HHHHHHHHHHHHCHHHHHHCC--CCCCCCHHHHHHHHHCCCC
T ss_conf 1379999999999975899899999996799147999-999999999997999997243--6661257999999867996
Q ss_pred CHHHHHHHHHHHHCC
Q ss_conf 889999999997078
Q gi|254780979|r 484 NPSIVQKMLKEKLGI 498 (500)
Q Consensus 484 dpk~v~~lL~e~L~~ 498 (500)
||+.|+++|+++|+-
T Consensus 615 nPk~V~elL~e~L~~ 629 (633)
T 1zq1_C 615 DGKLVSQIVRRKLQE 629 (633)
T ss_dssp ---------------
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 999999999999998