HHsearch results for GI: 254780979 and protein with PDBid: 1zq1_C

>1zq1_C Glutamyl-tRNA(Gln) amidotransferase subunit E; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: a.182.1.2 d.74.4.1 d.128.1.5
Probab=100.00  E-value=0  Score=1156.04  Aligned_cols=449  Identities=27%  Similarity=0.416  Sum_probs=412.0

Q ss_pred             CCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC----CCCCCHHHCCC----CCCCCCC------------------
Q ss_conf             454780338989997888689865558842468987----65206130268----9888737------------------
Q gi|254780979|r   17 GTTGDWEVVIGIEVHAQLSVVSKLFSGASVNFGAEP----NTQVSFFDAAM----PGMLPIL------------------   70 (500)
Q Consensus        17 ~~~~~~e~vIGLEiH~qL~t~tKlFc~c~~~~~~~p----Nt~v~~~~~g~----PG~lP~l------------------   70 (500)
                      .+.+.|+.+||||||+||+|+ ||||+|+++|+++|    |+++||+|.++    ||+||++                  
T Consensus         8 ~~~~~~~~~iGLEiH~QL~T~-KlFc~c~~~~~~~~~~~~~~~~~~~~~~l~~~~Pgalp~~~~~~~~~~~~~~~~~~l~   86 (633)
T 1zq1_C            8 FNYEELGLKVGLEIHRQLDTK-KLFSPVPSELSDKVEFTFQRRLRPTMSELGEIDPAALEEFKKGRVYVYEGNYELTDLV   86 (633)
T ss_dssp             SCTTTTTCCBEEEEEEEBSSB-CTTSSCBCCCCSCCCEEEEECCCCCEETTSCBCHHHHHHHHTTCEEEEEECTTTCBGG
T ss_pred             CCHHHHCCEEEEEEEEEECCC-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
T ss_conf             698997967879999876773-1478998767777654456777873013466787524555421000002454421001


Q ss_pred             ----------CHHHHHHHHHHHHHHCCEECCCCEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf             ----------8999999999877829762442013113212376788820144544201533899970677777410379
Q gi|254780979|r   71 ----------NGRCVQQAVMTGLGLNAHINKYSVFARKNYFYPDLPQGYQISQHDKPIVGEGKVSVSIGPDKSGQFRTIE  140 (500)
Q Consensus        71 ----------N~~av~~ai~~~~al~~~i~~~~~fdRK~YfYpDlpkgyQiTQ~~~Pi~~~G~l~~~~~~~~~~~~~~~~  140 (500)
                                |++||++|+++|+||||+|++.++|||||||||||||||||||   |||.||+++++.          ++
T Consensus        87 ~~~~~p~~~~N~~Av~~ai~~~~alnc~i~~~~~f~RK~yfypd~p~gyQitq---~i~~~G~i~~~~----------~~  153 (633)
T 1zq1_C           87 YMDEEPPRGPDREALEVALQIAYLLNAKPVDEVYYMRKIVIDGSNVSGFQRTA---IIATDGKVETPW----------GA  153 (633)
T ss_dssp             GTTSSCCCCCCHHHHHHHHHHHHHTTCEECSEECCEEEECSSSSSTTSEEEEC---EEEEEEEECCTT----------CC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEE---EEECCEEEECCC----------CC
T ss_conf             24667887668999999999999819972435556026761888777634036---863773895357----------71


Q ss_pred             EEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC
Q ss_conf             84236665202310011567871488661578612576303652778999999999999986420456764322011257
Q gi|254780979|r  141 VGIERIHLEQDAGKSIHDQYSAVSCIDLNRSGVALMEIVTKPDMRSSLEAKAFLTKLRSILRYLGTCDGNMEEGSMRADV  220 (500)
Q Consensus       141 v~I~~i~lEED~gk~~h~~~~~~slvD~NRaGvPLiEIVT~Pd~~s~~ea~~~~~~l~~ilr~~gisd~~meeGslR~Dv  220 (500)
                      |+|.||||||||||++|+. +++|+|||||||+|||||||+|||+||+||++|+++||++|||+|+|+++|  |||||||
T Consensus       154 i~I~rihLEEDagK~~h~~-~~~s~vD~NRaGvPLiEIVTePd~~speeA~~~~~~l~~~lr~~~~~~~~~--Gs~R~Dv  230 (633)
T 1zq1_C          154 VGIPTICLEEDAARIIERK-DKEVIYRLDRLGIPLIEISTTPDIHHPEQAKVVAKFIGDALRATKKVKRGL--GTIRQDL  230 (633)
T ss_dssp             EEEEEEEEEECCCEEEEEE-TTEEEEESTTTTCEEEEEECCTTBCSHHHHHHHHHHHHHHHHHTSCBCCSS--TTEEEEE
T ss_pred             CCEEEEEEECCCCCCCCCC-CCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCC
T ss_conf             6527898602345212578-995478104689756898506886799999999999999999986325778--7423566


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q ss_conf             543213766678862223540246599999999999999731--------------------------------------
Q gi|254780979|r  221 NVSVCRPGEAWGTRCEVKNVNSIRFLGLAIEYEARRQIAILE--------------------------------------  262 (500)
Q Consensus       221 NVSi~~~~~~~GtRvEIKNlnS~~~i~~AI~yEi~RQ~~ll~--------------------------------------  262 (500)
                      ||||+     +||||||||+|||++|++||+||+.||+++|+                                      
T Consensus       231 NVSv~-----~g~rvEIKNlns~~~i~~aie~Ei~RQ~~ll~~~~~~~~~~~~~~~~~~~~~dvT~~f~~~~sk~v~~~l  305 (633)
T 1zq1_C          231 NVSIK-----GGARIEIKGVQELDMIPIIIEREVERQLNLLKIRDELRKRGVKPKDIKEEFYDVTDIFENTKSKIIARVI  305 (633)
T ss_dssp             EECCT-----TSCCEEEECCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGSCCCCEECTTTTTTCSCHHHHHHH
T ss_pred             CCCCC-----CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
T ss_conf             63468-----9854885066568899999999999999999724466541467665664202312321344138888775


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q gi|254780979|r  263 --------------------------------------------------------------------------------  262 (500)
Q Consensus       263 --------------------------------------------------------------------------------  262 (500)
                                                                                                      
T Consensus       306 ~~gg~v~~~~l~~~~g~~g~~~~~~~Rlg~Ela~~aK~~v~Gi~HsDElp~ygi~~~ev~~i~~~l~~~~~dafil~~~~  385 (633)
T 1zq1_C          306 KKGGKVLAIKLPKFRGLIGREIQPGRRLGTEFADRAKKYVPGIFHIDELPNYGISQEEVNKVIERLNLSEEDAFVLVAAE  385 (633)
T ss_dssp             HTTCEEEECEETTCTTTSSSEEETTEEHHHHHHHHHTTTCSCCEEGGGCSBTTBCHHHHHHHHHHTTCCSSCEEEEEEES
T ss_pred             HCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf             05875898642665554454457664100466777753247766644456667527889999987368855445785160


Q ss_pred             -----------------CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
Q ss_conf             -----------------398003443233755433665303566777783327787731269999999885302483689
Q gi|254780979|r  263 -----------------DGGHIRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEIDEDFIRAIKKQIPELPDAK  325 (500)
Q Consensus       263 -----------------~G~~v~qETR~~d~~~~~T~~mR~KE~a~DYRyfPEPDLPpi~is~e~i~~i~~~lPelP~~~  325 (500)
                                       +|+.|.||||+||++ +.|.+||+|+  .||||||||||||+.|+++||++++++|||||+++
T Consensus       386 ~~~~~~a~~~v~~R~~E~g~~I~QETR~~d~d-g~T~~mR~~~--~DYRYFPEPDLPPl~Is~e~Ie~ir~~LPELP~~r  462 (633)
T 1zq1_C          386 EEKAKNALREVIKRAREAIEGVPEETRRALPD-GNTEYMRPLP--GKARMYPETDIPPLRIPDDLKKKIKENLPELPQAK  462 (633)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCCEEEECTT-SCEEEEECCC--CCCCEEECTTSCCEECCHHHHHHHHTSCCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCEEEECCCC--CCCCCCCCCCCCCEECCHHHHHHHHHHCCCCHHHH
T ss_conf             88888778877555664279765301244788-9875300025--56787999997887628999999998689987999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             886432026889998887641136789886-4024302457777654578876433874000648989999999888638
Q gi|254780979|r  326 RERFIGEFGISLYDASVLVSDKSIADYFEK-LAVNRDKKIVANWVINDLLGVLNRSGKSIEDTPISPNQLGELIDLIIDG  404 (500)
Q Consensus       326 ~~rl~~~yGLs~~dA~~L~~~~~la~~FE~-v~~~~~pk~~Anwi~~el~~~ln~~~~~~~~~~i~p~~laeLi~li~~g  404 (500)
                      ++||+++||||+++|.+|++++ +++||++ +..+.+||.+|||++++|.+++++    +...+++|++|++|+.|+.+|
T Consensus       463 ~~R~~~~ygLs~~dA~iL~~~~-~~~~Fee~v~~~~~pk~aanwl~~~L~~~~~e----~~~~~i~~~~la~Li~lv~~g  537 (633)
T 1zq1_C          463 VERYVKEYKLDRSLAQTLVDDE-RDELFEELVSMGVKPSLAASILVVVLKGLRKE----VPIENVTDEHIREAFQLYLEG  537 (633)
T ss_dssp             HHHHHTTTCCCHHHHHHHHHTS-THHHHHHHHHTTCSTTHHHHHHHHTTCC-----------------------------
T ss_pred             HHHHHHHCCCCHHHHHHHHCCH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHHHHCC
T ss_conf             9999997199999999986222-37889999873888899999999999987431----776789999999999999769


Q ss_pred             CCCHHHHHHHHHHHHHC-CCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             73147899999999817-99988999963987618988999999999983999899752721322658999999728977
Q gi|254780979|r  405 TISGKIAKDIFNILWEK-GGTPKEIVEELGLRQVTDLSAIEKVVDEVINSNPNNVARIATKPNLVSWFVGQVMKNTGGKA  483 (500)
Q Consensus       405 ~Is~~~aK~il~~l~~~-~~~p~~iie~~gL~~isD~~eL~~iv~eVI~~np~~V~~~kgk~ka~gfLvGqVMK~tkGkA  483 (500)
                      +||.++||+||.+|+.+ +++|.+||+++||.|+||+ +|+++|++||++||++|++++  .+++|||||||||+|||||
T Consensus       538 ~Is~~~aK~vl~~~~~~~~~~~~~Iiee~gL~qisD~-eL~~iV~eVi~~Np~~Vk~~k--~~a~gfLvGqVMK~tkGkA  614 (633)
T 1zq1_C          538 KIAKEAFEEIFKELARNPSKSAREVAEEKGLTLLSEE-EVTRIIEEVIQQNIEVVKAKG--MGAMGLIMGRVMAKVRGKA  614 (633)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHH-HHHHHHHHHHHHCHHHHHHCC--CCCCCCHHHHHHHHHCCCC
T ss_conf             1379999999999975899899999996799147999-999999999997999997243--6661257999999867996


Q ss_pred             CHHHHHHHHHHHHCC
Q ss_conf             889999999997078
Q gi|254780979|r  484 NPSIVQKMLKEKLGI  498 (500)
Q Consensus       484 dpk~v~~lL~e~L~~  498 (500)
                      ||+.|+++|+++|+-
T Consensus       615 nPk~V~elL~e~L~~  629 (633)
T 1zq1_C          615 DGKLVSQIVRRKLQE  629 (633)
T ss_dssp             ---------------
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             999999999999998