HHSEARCH alignment of GI: 254780979 and SCOP domain: d1ng6a_

Alignment
>d1ng6a_ a.182.1.1 (A:) Hypothetical protein YqeY {Bacillus subtilis [TaxId: 1423]}
Probab=97.92  E-value=2.7e-05  Score=56.08  Aligned_cols=96  Identities=17%  Similarity=0.260  Sum_probs=67.6

Q ss_pred             CCCHHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHCCC--------CHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHH
Q ss_conf             489899999998-886387314789999999981799--------98899996398761898899999999998399989
Q gi|254780979|r  388 PISPNQLGELID-LIIDGTISGKIAKDIFNILWEKGG--------TPKEIVEELGLRQVTDLSAIEKVVDEVINSNPNNV  458 (500)
Q Consensus       388 ~i~p~~laeLi~-li~~g~Is~~~aK~il~~l~~~~~--------~p~~iie~~gL~~isD~~eL~~iv~eVI~~np~~V  458 (500)
                      .++-+.+-.++. ++.+       .++-++.+-..+.        .--+++++.-..+.| +++++.+|+++|+++..  
T Consensus        44 ~~~d~~v~~vi~k~vKq-------r~es~e~y~~~~r~dl~e~e~~Ei~il~~yLP~~ls-eeEl~~~v~~~i~e~~a--  113 (148)
T d1ng6a_          44 SLTEDEELTVLSRELKQ-------RKDSLQEFSNANRLDLVDKVQKELDILEVYLPEQLS-EEELRTIVNETIAEVGA--  113 (148)
T ss_dssp             CCCHHHHHHHHHHHHHH-------HHHHHHHHHHHTCHHHHHHHHHHHHHHGGGSCCCCC-HHHHHHHHHHHHHHTTC--
T ss_pred             CCCHHHHHHHHHHHHHH-------HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHCC--
T ss_conf             99989999999999998-------898999988436288999999888999997124688-77899999999998299--


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             975272132265899999972897788999999999707
Q gi|254780979|r  459 ARIATKPNLVSWFVGQVMKNTGGKANPSIVQKMLKEKLG  497 (500)
Q Consensus       459 ~~~kgk~ka~gfLvGqVMK~tkGkAdpk~v~~lL~e~L~  497 (500)
                          ..++-+|..||.+|+..+|+||++.|+++++++|.
T Consensus       114 ----~~~kdmG~vM~~l~~~~~g~~Dg~~vs~~vk~~Ls  148 (148)
T d1ng6a_         114 ----SSKADMGKVMGAIMPKVKGKADGSLINKLVSSQLS  148 (148)
T ss_dssp             ----CSGGGHHHHHHHHHHHHTTTSCHHHHHHHHHHHCC
T ss_pred             ----CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
T ss_conf             ----75100889999999882798889999999998709


SCOP domain information

class: All alpha proteins
fold: GatB/YqeY motif
superfamily: GatB/YqeY motif
family: GatB/YqeY domain
domain: Hypothetical protein YqeY
species: Bacillus subtilis [TaxId: 1423]