HHSEARCH alignment of GI: 254780979 and SCOP domain: d1zq1c3

Alignment

Probab=91.67  E-value=0.00074  Score=45.50  Aligned_cols=44  Identities=20%  Similarity=0.136  Sum_probs=28.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEECCCEECCC---CCCCCCCC
Q ss_conf             98887378999999999877829762442013113212376---78882014
Q gi|254780979|r   64 PGMLPILNGRCVQQAVMTGLGLNAHINKYSVFARKNYFYPD---LPQGYQIS  112 (500)
Q Consensus        64 PG~lP~lN~~av~~ai~~~~al~~~i~~~~~fdRK~YfYpD---lpkgyQiT  112 (500)
                      ||+||++|+.++     .....||.+.....||+++||||+   ...++++.
T Consensus        58 pgal~~~nk~~~-----~~~~~n~~~~~l~~~g~~p~~~pN~~Av~~ai~~~  104 (321)
T d1zq1c3          58 PAALEEFKKGRV-----YVYEGNYELTDLVYMDEEPPRGPDREALEVALQIA  104 (321)
T ss_dssp             HHHHHHHHTTCE-----EEEEECTTTCBGGGTTSSCCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCC-----CEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf             555455541432-----00025777301105798787662788999999999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Glutamine synthetase/guanido kinase
superfamily: Glutamine synthetase/guanido kinase
family: GatB/GatE catalytic domain-like
domain: Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE
species: Pyrococcus abyssi [TaxId: 29292]