RPSBLAST alignment of GI: 254780979 and protein with PDBid: 2d6f
>2d6f_C Glutamyl-tRNA(Gln) amidotransferase subunit E; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: a.182.1.2 d.74.4.1 d.128.1.5 Length = 619
Score = 244 bits (625), Expect = 2e-65
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 12/249 (4%)
Query: 248 LAIEYEARRQIAILEDGGHIRQETRLFDPSKNETRSLRTKEDALDYRYFSEPDLLPLEID 307
A+ RR + +ETR P N + R + E D+ I+
Sbjct: 379 NALREVIRR---AEMAIQGVPEETRKALPDGNTQY---LRPLPTSSRMYLETDIPLFRIE 432
Query: 308 EDFIRAIKKQIPELPDAKRERFIGEFGISLYDASVLVSDKSIADYFEKLAVNRDKKIVAN 367
+D + I++ +PELP K+ER + ++G+S AS LV + D FE L R V
Sbjct: 433 DDLLEGIRRNLPELPSEKKERIMRDYGLSEDLASQLVKRN-LVDEFEALTEFRVDTTVIA 491
Query: 368 WVINDLLGVLNRSGKSIEDTPISPNQLGELIDLIIDGTISGKIAKDIFNILWEKGGTPKE 427
++ L L R G ++ + ++L + I L+ G IS +DI + ++G ++
Sbjct: 492 SLLAYTLRELRREGHDVD--GLGLDELRDAIKLLEVGKISKDALRDIVACMADEGLAAED 549
Query: 428 IVEELGLRQVTDLSAIEKVVDEVINSNPNNVARIATKPNLVSWFVGQVMKNTGGKANPSI 487
+L L + + IE ++ E++ N + ++ + +GQ M G+A+ +
Sbjct: 550 AARKLNLLLLAE-DEIESIIQEIVEGNLDMISER--GMGAMGPLMGQAMGRLRGRADGKV 606
Query: 488 VQKMLKEKL 496
V ++L+EK+
Sbjct: 607 VNRILREKI 615