HHsearch alignment for GI: 254780982 and conserved domain: COG1279
>COG1279 Lysine efflux permease [General function prediction only].
Probab=100.00 E-value=1.7e-32 Score=179.42 Aligned_cols=197 Identities=16% Similarity=0.208 Sum_probs=172.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHH
Q ss_conf 989999999999999948994799999999831028899999999977669999999977755-3074788867689999
Q gi|254780982|r 2 TLETWIHFLIFTLIITSAPGPGNILTINHALQHGWRPNKILILGQETAVFIIMLSITMGTKFL-SQLAYTMLIIKFLGVA 80 (202)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~PGP~~~~~i~~~~~~G~~~~~~~~~G~~~g~~~~~~~~~~g~~~l-~~~~~~~~~l~~~G~~ 80 (202)
T Consensus 1 ~~~~~l~Gf~l~~~LI~pIGaQNaFVl~QGi~r--~~~l~~~~~c~i~D~~Li~~gv~G~~~li~~~p~l~~i~~~~G~~ 78 (202)
T COG1279 1 MMSAFLQGFLLGASLILPIGAQNAFVLNQGIRR--EYVLPIALLCAISDIVLISAGVFGVGALIAKSPWLLLIVRWGGAA 78 (202)
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 969999899999999985340359999988866--219999999999999999999988999998678999999999899
Q ss_pred HHHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999741246778710---135678889999878986327425788786667652477333999999999999999
Q gi|254780982|r 81 WLIYSAWSAWYSPFNDLPLG---EIPLSSKSKLFVKGFITDITNGKAWAFFMAMVPAYLNMNHYILPQSLILSLTMVSVD 157 (202)
Q Consensus 81 yL~~lg~~~~~~~~~~~~~~---~~~~~~~~~~f~~G~~v~l~NPka~~f~~~~~~~fi~~~~~~~~~~~~l~~~~~~~~ 157 (202)
T Consensus 79 FLl~yg~~a~~~a~~~~~~~~~~~~~~~~~~~~l~~alavT~LNPhvyLDtvvliGs~~~~--~~~~~k~~F~~Ga~~aS 156 (202)
T COG1279 79 FLLYYGLLALKSAPRGPSQLQVAEFTKLKLKKVLLFALAVTLLNPHVYLDTVVLIGSLAAQ--LSDEAKWFFALGAISAS 156 (202)
T ss_pred HHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHH
T ss_conf 9999999999850666000454676622279999999999980721334467765121654--06521278999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999996051389999999999999999999609
Q gi|254780982|r 158 AMVLMTFSLICSKLRTLFSSSKFVKIQNRVSAVVFLLLALRIVAN 202 (202)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~in~i~g~~li~~ai~l~~s 202 (202)
T Consensus 157 ~~WF~~L~~~a~~l~~~~~~pk~~riin~vva~vM~~ia~~L~~~ 201 (202)
T COG1279 157 FLWFFLLALGARWLSPLLANPKAWRIINLVVAVVMWALAVKLAVQ 201 (202)
T ss_pred HHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999976110581999999999999999999999516